RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780513|ref|YP_003064926.1| hypothetical protein
CLIBASIA_02000 [Candidatus Liberibacter asiaticus str. psy62]
         (66 letters)



>d1dqea_ a.39.2.1 (A:) Moth pheromone-binding protein, PBP {Silk
           moth (Bombyx mori) [TaxId: 7091]}
          Length = 137

 Score = 24.2 bits (52), Expect = 3.5
 Identities = 7/20 (35%), Positives = 8/20 (40%)

Query: 12  FKCFLKNSRKKHITPSKDVV 31
             CF     K +  PS DV 
Sbjct: 115 ATCFKAEIHKLNWAPSMDVA 134


>d1llaa2 a.86.1.1 (A:110-379) Arthropod hemocyanin {Horseshoe crab
           (Limulus polyphemus) [TaxId: 6850]}
          Length = 270

 Score = 22.4 bits (48), Expect = 9.9
 Identities = 4/19 (21%), Positives = 9/19 (47%)

Query: 35  IKKYEDRIRSSIDKKTFLT 53
           + +  +RI  SI     ++
Sbjct: 160 MVRMRERILDSIHLGYVIS 178


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.136    0.377 

Gapped
Lambda     K      H
   0.267   0.0442    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 233,741
Number of extensions: 8874
Number of successful extensions: 33
Number of sequences better than 10.0: 1
Number of HSP's gapped: 33
Number of HSP's successfully gapped: 9
Length of query: 66
Length of database: 2,407,596
Length adjustment: 35
Effective length of query: 31
Effective length of database: 1,927,046
Effective search space: 59738426
Effective search space used: 59738426
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.6 bits)