HHSEARCH alignment of GI: 254780515 and SCOP domain: d1na6a2

Alignment

Probab=94.94  E-value=0.0025  Score=34.40  Aligned_cols=37  Identities=19%  Similarity=0.343  Sum_probs=33.3

Q ss_pred             CEEEEEEECCHHHHHHHHHHCCCCEEEEEEHHHHHHH
Q ss_conf             7179998500322105532033538999852011334
Q gi|254780515|r    2 PTIHLLTVDSEIAENKAERIDKHNIILVVLDKVKKEK   38 (42)
Q Consensus         2 ptihlltvdseiaenkaeridkhniilvvldkvkkek   38 (42)
                      +.+||+|.+..|.+||..-+..||+.|||-+.+++.-
T Consensus       164 ~~~~L~TL~~~IS~~q~~eM~~~~v~LVVP~~i~~sy  200 (220)
T d1na6a2         164 HQVHLFTLQEGVSLAQYREMRESGVRLVVPSSLHKKY  200 (220)
T ss_dssp             ---CEEECCSCCCHHHHHHHHTTTCCEECCHHHHTTS
T ss_pred             HHHEEEECCCCCCHHHHHHHHHCCEEEEEEHHHHHCC
T ss_conf             5440230368888899999997796999737876307

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: Restriction endonuclease-like
family: Type II restriction endonuclease catalytic domain
domain: Restriction endonuclease EcoRII, C-terminal domain
species: Escherichia coli [TaxId: 562]