HHsearch alignment for GI: 254780516 and conserved domain: COG2265
>COG2265 TrmA SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].
Probab=97.21 E-value=0.0003 Score=41.73 Aligned_cols=69 Identities=29% Similarity=0.437 Sum_probs=49.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC------CCCEEEEEECCCC--CCCEEEEECC
Q ss_conf 6964107947889999872220895699998069555112220012332------3211589753657--8871999868
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL------IFGDIAKIKTQDI--PDHDVLLAGF 74 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~------~~~DI~~~~~~~~--~~~D~l~gG~ 74 (83)
T Consensus 296 ~vlDlYCGvG~f~l~lA~-----~~~~V~gvEi~~~aV~~A~~NA~~n~i~N~~f~~~~ae~~~~~~~~~~~~d~VvvDP 370 (432)
T COG2265 296 RVLDLYCGVGTFGLPLAK-----RVKKVHGVEISPEAVEAAQENAAANGIDNVEFIAGDAEEFTPAWWEGYKPDVVVVDP 370 (432)
T ss_pred EEEECCCCCCHHHHHHCC-----CCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEEECC
T ss_conf 799935588701355312-----465799996489999999999997398877999586888865100257999899899
Q ss_pred CC
Q ss_conf 99
Q gi|254780516|r 75 PC 76 (83)
Q Consensus 75 PC 76 (83)
T Consensus 371 PR 372 (432)
T COG2265 371 PR 372 (432)
T ss_pred CC
T ss_conf 99