HHsearch alignment for GI: 254780516 and conserved domain: PRK09489
>PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional.
Probab=92.80 E-value=0.46 Score=25.77 Aligned_cols=66 Identities=18% Similarity=0.317 Sum_probs=46.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-----CCCEEEEEECCCC-CCCEEEEECCC
Q ss_conf 6964107947889999872220895699998069555112220012332-----3211589753657-88719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-----IFGDIAKIKTQDI-PDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-----~~~DI~~~~~~~~-~~~D~l~gG~P 75 (83)
T Consensus 199 ~VLDlGCG~Gvi~~~la~~~--p~~-~v~l~Dv~a~Al~~ar~nl~~N~l~~~v~~sd~~~----~v~~~fD~IvsNPP 270 (342)
T PRK09489 199 KVLDVGCGAGVLSAVLAQHS--PKI-RLTLCDVSAPAVEASRATLAANGLEGEVFASNVFS----EIKGRFDMIISNPP 270 (342)
T ss_pred CEEEECCCHHHHHHHHHHHC--CCC-EEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCC----CCCCCCCEEEECCC
T ss_conf 47860678179999999869--997-69999688999999999899809886899756445----65567898996885