HHsearch alignment for GI: 254780516 and conserved domain: pfam01170
>pfam01170 UPF0020 Putative RNA methylase family UPF0020. This domain is probably a methylase. It is associated with the THUMP domain that also occurs with RNA modification domains.
Probab=96.27 E-value=0.0063 Score=35.10 Aligned_cols=69 Identities=25% Similarity=0.424 Sum_probs=45.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC-------CCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 696410794788999987222089569999806955511222001233-------2321158975365788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~-------~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
T Consensus 31 ~vlDP~CGSGtilI--EAa~~~~~~-~~~G~Did~~~v~~A~~N~~~~g~~~~i~~~~~D~~~l~~~~-~~~d~Iv~nPP 106 (171)
T pfam01170 31 PLLDPFCGSGTILI--EAALMGANV-ALYGSDIDRRMVRGARINAEAAGVGDKIEFVQADAADLPLLN-GSVDTIVTDPP 106 (171)
T ss_pred EEEECCCCCCHHHH--HHHHHHCCC-CCEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCC-CCCEEEEECCC
T ss_conf 78868998789999--999961358-953675879999999999998289984699976665387987-88318998898