HHsearch alignment for GI: 254780516 and conserved domain: pfam05185

>pfam05185 PRMT5 PRMT5 arginine-N-methyltransferase. The human homologue of yeast Skb1 (Shk1 kinase-binding protein 1) is PRMT5, an arginine-N-methyltransferase. These proteins appear to be key mitotic regulators. They play a role in Jak signalling in higher eukaryotes.

Probab=94.02  E-value=0.13  Score=28.51  Aligned_cols=70  Identities=29%  Similarity=0.398  Sum_probs=43.5

Q ss_pred             CCCCCHH-HHHHHHHHHCCCCE-EEEEEECCHHHHHHHHH--CC---CC--CCCCCEEEEEECCCCCCCEEEE----ECC
Q ss_conf             0794788-99998722208956-99998069555112220--01---23--3232115897536578871999----868
Q gi|254780516|r    8 FCGIGGI-RLDLEQTFNHRNVE-CFFSSEINPYSVKTYQA--NF---PN--TLIFGDIAKIKTQDIPDHDVLL----AGF   74 (83)
Q Consensus         8 FsG~GG~-~~gl~~a~~~~~~~-~v~a~e~d~~a~~~y~~--n~---~~--~~~~~DI~~~~~~~~~~~D~l~----gG~   74 (83)
T Consensus       194 GAGRGPLV~~~l~A~-~~~~~~v~i~AVEKNpnA~vtL~~r~n~~~W~~~V~ii~~DMR~w~~p~--k~Di~VSELLGSF  270 (447)
T pfam05185       194 GAGRGPLVDRALRAA-EETGRKVKIYAVEKNPNAVVTLQKRVNFEEWGDKVTLISSDMREWKGPE--KADILVSELLGSF  270 (447)
T ss_pred             CCCCCHHHHHHHHHH-HHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCC--CCCEEEEECCCCC
T ss_conf             589648999999999-9819966999995687799999998505431780699908000579987--7358975211666


Q ss_pred             CCCCCC
Q ss_conf             997543
Q gi|254780516|r   75 PCQPFS   80 (83)
Q Consensus        75 PCq~fS   80 (83)
T Consensus       271 GDNELS  276 (447)
T pfam05185       271 GDNELS  276 (447)
T ss_pred             CCCCCC
T ss_conf             665579