HHsearch results for GI: 254780516 and protein with PDBid: 1qam_A

>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A

Probab=93.58  E-value=0.099  Score=28.01  Aligned_cols=67  Identities=21%  Similarity=0.266  Sum_probs=48.3

Q ss_pred             EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC----CCCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf             69641079478899998722208956999980695551122200123----32321158975365788719998689
Q gi|254780516|r    3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAKIKTQDIPDHDVLLAGFP   75 (83)
Q Consensus         3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~----~~~~~DI~~~~~~~~~~~D~l~gG~P   75 (83)
                      +|+|.=+|.|.++..|-..+     ..|.++|+|+...+.++.++.+    +.+.+|+.+++..+... ..++|-.|
T Consensus        33 ~VlEIGpG~G~LT~~L~~~~-----~~v~avEiD~~l~~~L~~~~~~~~n~~ii~~D~l~~~~~~~~~-~~vv~NLP  103 (244)
T 1qam_A           33 NIFEIGSGKGHFTLELVQRC-----NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQS-YKIFGNIP  103 (244)
T ss_dssp             EEEEECCTTSHHHHHHHHHS-----SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCC-CEEEEECC
T ss_pred             EEEEECCCCCHHHHHHHHCC-----CCEEEEEECHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCC-EEEEEECH
T ss_conf             79997388719999998555-----8306998530177999974144776577300122256544675-47997430