HHsearch results for GI: 254780516 and protein with PDBid: 2ih2_A
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5- methylpyrimidin-2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=95.71 E-value=0.0099 Score=33.05 Aligned_cols=69 Identities=17% Similarity=0.165 Sum_probs=45.2
Q ss_pred CEEEEECCCCCHHHHHH-HHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCC
Q ss_conf 26964107947889999-872220895699998069555112220012332321158975365788719998689975
Q gi|254780516|r 2 LKITDLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQP 78 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl-~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~PCq~ 78 (83)
.+|+|.+||-|+|-..+ ++.. .-..+..+|+|+.+.+.-+.+ ...++|.... ..-..+|+++|-||=..
T Consensus 41 ~~IlDPacGsG~FL~~~~~~~~---~~~~i~G~did~~~~~la~~~---~i~~~D~l~~--~~~~~fD~VigNPPy~~ 110 (421)
T 2ih2_A 41 GRVLEPACAHGPFLRAFREAHG---TAYRFVGVEIDPKALDLPPWA---EGILADFLLW--EPGEAFDLILGNPPYGI 110 (421)
T ss_dssp CEEEEETCTTCHHHHHHHHHHC---SCSEEEEEESCTTTCCCCTTE---EEEESCGGGC--CCSSCEEEEEECCCCCC
T ss_pred CEEEECCCCHHHHHHHHHHHCC---CCCEEEEEECCHHHHHHHHHH---HHHHCCCCCC--CCCCCCCEEEECCCCCC
T ss_conf 9999687764699999998677---678699997989999999974---2773773336--85457777872576554