HHsearch results for GI: 254780516 and protein with PDBid: 3a27_A
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.28 E-value=4.8e-07 Score=54.71 Aligned_cols=69 Identities=20% Similarity=0.324 Sum_probs=50.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC------CCCCEEEEEECCCCCCCEEEEECCCC
Q ss_conf 696410794788999987222089569999806955511222001233------23211589753657887199986899
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGDIAKIKTQDIPDHDVLLAGFPC 76 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~------~~~~DI~~~~~~~~~~~D~l~gG~PC 76 (83)
+|+|+|||+|.+.+.+.... +...|+++|++|.|.+..+.|.... .+++|.+++..+ ..+|.++.++|=
T Consensus 122 ~VlDl~aG~G~~~i~~ak~~---~~~~V~aiDinp~av~~l~~N~~~N~v~n~~~i~~D~r~~~~~--~~fD~Vimn~p~ 196 (272)
T 3a27_A 122 VVVDMFAGIGYFTIPLAKYS---KPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELK--DVADRVIMGYVH 196 (272)
T ss_dssp EEEETTCTTTTTHHHHHHHT---CCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCT--TCEEEEEECCCS
T ss_pred EEEEECCCCCHHHHHHHHCC---CCEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC--CCCCEEEECCCC
T ss_conf 99993786588999987506---9509999959999999999999984999759992776534557--888899978951