HHsearch results for GI: 254780516 and protein with PDBid: 3ajd_A

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=95.32  E-value=0.014  Score=32.30  Aligned_cols=75  Identities=24%  Similarity=0.253  Sum_probs=51.6

Q ss_pred             EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC------CCCEEEEEECCC---CCCCEEEEEC
Q ss_conf             6964107947889999872220895699998069555112220012332------321158975365---7887199986
Q gi|254780516|r    3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL------IFGDIAKIKTQD---IPDHDVLLAG   73 (83)
Q Consensus         3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~------~~~DI~~~~~~~---~~~~D~l~gG   73 (83)
                      +|+|+|||.||=+..+.....+.  ..+.++|.++...+.++.|....-      ...|.+++....   -..+|.++--
T Consensus        86 ~vLD~CaapGgKt~~i~~~~~~~--~~i~a~d~~~~rl~~l~~~~~r~g~~~~~~~~~d~~~~~~~~~~~~~~fD~ILlD  163 (274)
T 3ajd_A           86 FILDMCAAPGGKTTHLAQLMKNK--GTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLD  163 (274)
T ss_dssp             EEEETTCTTCHHHHHHHHHTTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEE
T ss_pred             EEEEECCCCCHHHHHHHHHHHCC--CCEEEECCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCCCCCEEEEC
T ss_conf             79990788868899999985386--8338732778899999887876511441002243767666531454457679963


Q ss_pred             CCCCCC
Q ss_conf             899754
Q gi|254780516|r   74 FPCQPF   79 (83)
Q Consensus        74 ~PCq~f   79 (83)
                      +||.+-
T Consensus       164 aPCSg~  169 (274)
T 3ajd_A          164 APCSGN  169 (274)
T ss_dssp             ECCC--
T ss_pred             CCCCCC
T ss_conf             887666