HHsearch results for GI: 254780516 and protein with PDBid: 3ajd_A
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=95.32 E-value=0.014 Score=32.30 Aligned_cols=75 Identities=24% Similarity=0.253 Sum_probs=51.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC------CCCEEEEEECCC---CCCCEEEEEC
Q ss_conf 6964107947889999872220895699998069555112220012332------321158975365---7887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL------IFGDIAKIKTQD---IPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~------~~~DI~~~~~~~---~~~~D~l~gG 73 (83)
+|+|+|||.||=+..+.....+. ..+.++|.++...+.++.|....- ...|.+++.... -..+|.++--
T Consensus 86 ~vLD~CaapGgKt~~i~~~~~~~--~~i~a~d~~~~rl~~l~~~~~r~g~~~~~~~~~d~~~~~~~~~~~~~~fD~ILlD 163 (274)
T 3ajd_A 86 FILDMCAAPGGKTTHLAQLMKNK--GTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLD 163 (274)
T ss_dssp EEEETTCTTCHHHHHHHHHTTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHHHHCC--CCEEEECCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCCCCCEEEEC
T ss_conf 79990788868899999985386--8338732778899999887876511441002243767666531454457679963
Q ss_pred CCCCCC
Q ss_conf 899754
Q gi|254780516|r 74 FPCQPF 79 (83)
Q Consensus 74 ~PCq~f 79 (83)
+||.+-
T Consensus 164 aPCSg~ 169 (274)
T 3ajd_A 164 APCSGN 169 (274)
T ss_dssp ECCC--
T ss_pred CCCCCC
T ss_conf 887666