HHsearch results for GI: 254780516 and protein with PDBid: 3dmg_A

>3dmg_A Probable ribosomal RNA small subunit methyltransferase; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=96.50  E-value=0.0057  Score=34.25  Aligned_cols=69  Identities=19%  Similarity=0.281  Sum_probs=46.9

Q ss_pred             EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCC----CCCEEEEECCCC
Q ss_conf             69641079478899998722208956999980695551122200123323211589753657----887199986899
Q gi|254780516|r    3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI----PDHDVLLAGFPC   76 (83)
Q Consensus         3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~----~~~D~l~gG~PC   76 (83)
                      ||+|+.||.|.+...+.+.    +.+ +.++|+++.+.+.-+.|.........+...+....    ..+|+|+..+|=
T Consensus       236 ~VLDlGcG~G~~~~~la~~----~~~-v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~n~~~  308 (381)
T 3dmg_A          236 QVLDLGAGYGALTLPLARM----GAE-VVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPF  308 (381)
T ss_dssp             EEEEETCTTSTTHHHHHHT----TCE-EEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCC
T ss_pred             EEEEEEEECCHHHHHHHHC----CCE-EECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEECCCH
T ss_conf             8999960104888976751----988-741469999999999999982997388530100144667986899989324