HHsearch results for GI: 254780516 and protein with PDBid: 3frh_A
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=90.04 E-value=0.59 Score=24.11 Aligned_cols=42 Identities=12% Similarity=0.160 Sum_probs=32.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC
Q ss_conf 696410794788999987222089569999806955511222001233
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~ 50 (83)
+|+|+=||.|.+.+.+. . +. .|.++|+++.+.+.-+.|....
T Consensus 108 ~VLDlGCG~G~l~~~~~--~---~~-~v~gvD~s~~~l~~ar~~~~~~ 149 (253)
T 3frh_A 108 RVLDIACGLNPLALYER--G---IA-SVWGCDIHQGLGDVITPFAREK 149 (253)
T ss_dssp EEEEETCTTTHHHHHHT--T---CS-EEEEEESBHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCHHHHHHC--C---CC-EEEEEECCHHHHHHHHHHHHHC
T ss_conf 59996788889999976--8---98-3899979799999999999982