Query gi|254780516|ref|YP_003064929.1| type II modification methyltransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 83
No_of_seqs 109 out of 2682
Neff 7.2
Searched_HMMs 23785
Date Tue May 31 20:38:50 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780516.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dct_A Protein (modification m 100.0 7.6E-33 3.2E-37 184.2 6.4 78 2-83 1-78 (324)
2 2c7p_A Modification methylase 100.0 6E-32 2.5E-36 179.7 6.3 77 2-83 12-88 (327)
3 1g55_A DNA cytosine methyltran 100.0 1.6E-31 6.9E-36 177.5 3.9 80 2-83 3-85 (343)
4 3g7u_A Cytosine-specific methy 100.0 2.3E-31 9.5E-36 176.9 4.0 78 2-83 3-88 (376)
5 3me5_A Cytosine-specific methy 100.0 5.4E-31 2.3E-35 174.9 5.0 79 1-83 88-186 (482)
6 2qrv_A DNA (cytosine-5)-methyl 100.0 3.6E-29 1.5E-33 165.8 5.7 81 1-83 16-100 (295)
7 2pv0_B DNA (cytosine-5)-methyl 99.5 2.8E-16 1.2E-20 101.0 -0.4 62 2-83 190-254 (386)
8 2qrv_B DNA (cytosine-5)-methyl 99.5 5.6E-16 2.3E-20 99.6 -1.0 62 2-83 34-98 (230)
9 2yx1_A Hypothetical protein MJ 98.4 2.7E-07 1.2E-11 55.9 5.7 67 3-75 198-267 (336)
10 1wy7_A Hypothetical protein PH 98.4 7.8E-07 3.3E-11 53.6 7.9 72 3-78 52-124 (207)
11 3a27_A TYW2, uncharacterized p 98.3 4.8E-07 2E-11 54.7 4.0 69 3-76 122-196 (272)
12 1ne2_A Hypothetical protein TA 98.2 9.7E-07 4.1E-11 53.2 5.0 66 3-76 54-120 (200)
13 2fpo_A Methylase YHHF; structu 98.2 5.2E-07 2.2E-11 54.5 3.5 71 2-76 56-132 (202)
14 2ift_A Putative methylase HI07 98.2 1.9E-06 7.8E-11 51.8 6.0 72 2-77 55-136 (201)
15 2esr_A Methyltransferase; stru 98.2 9.1E-07 3.8E-11 53.3 3.5 69 3-75 34-109 (177)
16 2frn_A Hypothetical protein PH 98.1 4.5E-06 1.9E-10 49.8 6.7 70 3-78 128-204 (278)
17 1ws6_A Methyltransferase; stru 98.1 3.1E-06 1.3E-10 50.6 5.0 68 3-75 44-119 (171)
18 2as0_A Hypothetical protein PH 98.1 9.8E-06 4.1E-10 48.1 6.9 75 2-80 219-303 (396)
19 2fhp_A Methylase, putative; al 98.0 1.5E-05 6.2E-10 47.2 7.2 69 3-75 47-125 (187)
20 3gdh_A Trimethylguanosine synt 98.0 2.2E-05 9.2E-10 46.4 7.3 71 3-80 81-158 (241)
21 2b78_A Hypothetical protein SM 97.9 3.1E-05 1.3E-09 45.6 6.5 72 3-78 215-297 (385)
22 2jjq_A Uncharacterized RNA met 97.8 2.8E-05 1.2E-09 45.9 5.8 71 3-79 293-366 (425)
23 1wxx_A TT1595, hypothetical pr 97.8 5.2E-05 2.2E-09 44.5 6.9 73 3-80 212-293 (382)
24 2qm3_A Predicted methyltransfe 97.7 3.7E-05 1.5E-09 45.3 4.3 71 3-78 175-253 (373)
25 3bt7_A TRNA (uracil-5-)-methyl 97.6 3.1E-05 1.3E-09 45.6 3.8 73 3-80 216-309 (369)
26 2igt_A SAM dependent methyltra 97.6 0.00015 6.3E-09 42.2 6.8 70 2-76 155-235 (332)
27 3c0k_A UPF0064 protein YCCW; P 97.6 0.0002 8.5E-09 41.5 7.0 75 2-80 222-307 (396)
28 1uwv_A 23S rRNA (uracil-5-)-me 97.4 9.9E-05 4.2E-09 43.1 3.8 71 3-78 289-368 (433)
29 2ozv_A Hypothetical protein AT 97.4 0.00017 6.9E-09 42.0 4.6 73 3-78 39-127 (260)
30 3evz_A Methyltransferase; NYSG 97.4 0.00051 2.1E-08 39.5 6.9 72 3-77 58-134 (230)
31 2b3t_A Protein methyltransfera 97.3 0.00065 2.8E-08 39.0 7.4 75 2-80 111-190 (276)
32 3lpm_A Putative methyltransfer 97.3 0.00023 9.6E-09 41.3 4.2 73 2-78 51-131 (259)
33 3grz_A L11 mtase, ribosomal pr 97.2 0.0013 5.5E-08 37.4 7.2 69 2-75 62-134 (205)
34 1nv8_A HEMK protein; class I a 97.1 0.00053 2.2E-08 39.4 4.5 74 2-79 125-205 (284)
35 2b9e_A NOL1/NOP2/SUN domain fa 97.0 0.00067 2.8E-08 38.9 4.7 77 2-80 104-188 (309)
36 1dus_A MJ0882; hypothetical pr 96.8 0.0032 1.4E-07 35.5 7.0 70 3-77 55-130 (194)
37 3ll7_A Putative methyltransfer 96.8 0.0023 9.5E-08 36.3 6.2 70 3-77 96-174 (410)
38 2frx_A Hypothetical protein YE 96.8 0.00077 3.2E-08 38.6 3.7 75 3-79 120-200 (479)
39 2nxc_A L11 mtase, ribosomal pr 96.7 0.0027 1.2E-07 35.8 5.6 65 2-73 122-191 (254)
40 3m6w_A RRNA methylase; rRNA me 96.6 0.0023 9.5E-08 36.2 4.8 76 2-79 103-183 (464)
41 3dmg_A Probable ribosomal RNA 96.5 0.0057 2.4E-07 34.3 6.2 69 3-76 236-308 (381)
42 2dul_A N(2),N(2)-dimethylguano 96.3 0.0036 1.5E-07 35.2 4.5 44 2-48 49-92 (378)
43 3mti_A RRNA methylase; SAM-dep 96.3 0.0021 8.8E-08 36.4 3.3 42 3-49 25-66 (185)
44 3m4x_A NOL1/NOP2/SUN family pr 96.3 0.002 8.5E-08 36.5 2.8 75 3-79 108-188 (456)
45 2f8l_A Hypothetical protein LM 96.2 0.016 6.5E-07 32.1 7.2 75 2-78 132-213 (344)
46 3eey_A Putative rRNA methylase 96.2 0.0033 1.4E-07 35.5 3.7 71 3-75 25-102 (197)
47 2h00_A Methyltransferase 10 do 96.1 0.021 8.9E-07 31.4 7.5 73 2-77 67-151 (254)
48 1l3i_A Precorrin-6Y methyltran 95.9 0.026 1.1E-06 30.9 7.1 66 3-74 36-108 (192)
49 1sqg_A SUN protein, FMU protei 95.8 0.027 1.1E-06 30.9 7.0 75 3-80 249-329 (429)
50 2pjd_A Ribosomal RNA small sub 95.8 0.0086 3.6E-07 33.3 4.5 72 3-77 199-272 (343)
51 2ih2_A Modification methylase 95.7 0.0099 4.1E-07 33.0 4.3 69 2-78 41-110 (421)
52 2yxl_A PH0851 protein, 450AA l 95.7 0.026 1.1E-06 30.9 6.4 77 2-80 261-344 (450)
53 3bxo_A N,N-dimethyltransferase 95.6 0.015 6.1E-07 32.2 4.8 64 3-73 43-107 (239)
54 2fyt_A Protein arginine N-meth 95.5 0.012 5.2E-07 32.5 4.2 67 3-74 67-139 (340)
55 3ajd_A Putative methyltransfer 95.3 0.014 5.8E-07 32.3 3.9 75 3-79 86-169 (274)
56 2yxd_A Probable cobalt-precorr 95.3 0.018 7.8E-07 31.7 4.5 42 3-49 38-79 (183)
57 1g6q_1 HnRNP arginine N-methyl 94.8 0.028 1.2E-06 30.8 4.2 66 3-73 41-112 (328)
58 3hm2_A Precorrin-6Y C5,15-meth 94.7 0.039 1.6E-06 30.1 4.7 44 3-49 28-71 (178)
59 1yb2_A Hypothetical protein TA 94.6 0.15 6.2E-06 27.2 7.6 72 2-77 112-190 (275)
60 3kr9_A SAM-dependent methyltra 94.6 0.11 4.7E-06 27.8 6.9 45 3-50 18-62 (225)
61 1ixk_A Methyltransferase; open 94.5 0.096 4E-06 28.1 6.5 75 3-80 121-201 (315)
62 1or8_A Protein arginine N-meth 94.5 0.044 1.9E-06 29.8 4.7 65 3-72 60-130 (340)
63 2pxx_A Uncharacterized protein 94.4 0.029 1.2E-06 30.7 3.5 65 3-72 45-113 (215)
64 1wzn_A SAM-dependent methyltra 94.3 0.15 6.4E-06 27.1 7.1 64 3-73 44-112 (252)
65 3m70_A Tellurite resistance pr 94.2 0.15 6.5E-06 27.0 7.0 66 3-75 123-193 (286)
66 3g5l_A Putative S-adenosylmeth 94.2 0.065 2.7E-06 28.9 5.0 68 2-74 46-116 (253)
67 2avn_A Ubiquinone/menaquinone 94.1 0.063 2.7E-06 29.0 4.7 64 3-72 57-120 (260)
68 3m33_A Uncharacterized protein 94.0 0.093 3.9E-06 28.2 5.5 68 2-74 50-119 (226)
69 1g8a_A Fibrillarin-like PRE-rR 94.0 0.075 3.1E-06 28.6 5.0 75 2-78 75-155 (227)
70 3gnl_A Uncharacterized protein 94.0 0.053 2.2E-06 29.4 4.2 44 3-49 24-67 (244)
71 3kkz_A Uncharacterized protein 94.0 0.056 2.4E-06 29.2 4.3 69 3-76 49-124 (267)
72 3bkw_A MLL3908 protein, S-aden 93.8 0.092 3.9E-06 28.2 5.2 67 2-73 45-114 (243)
73 3lec_A NADB-rossmann superfami 93.8 0.24 1E-05 26.1 7.3 44 3-49 24-67 (230)
74 3dtn_A Putative methyltransfer 93.8 0.083 3.5E-06 28.4 4.9 72 2-78 46-121 (234)
75 3ftd_A Dimethyladenosine trans 93.7 0.059 2.5E-06 29.1 4.0 71 3-77 34-106 (249)
76 3jwg_A HEN1, methyltransferase 93.6 0.29 1.2E-05 25.7 7.5 70 3-75 32-111 (219)
77 1qam_A ERMC' methyltransferase 93.6 0.099 4.2E-06 28.0 5.0 67 3-75 33-103 (244)
78 1ri5_A MRNA capping enzyme; me 93.6 0.057 2.4E-06 29.2 3.8 68 3-74 67-141 (298)
79 1y8c_A S-adenosylmethionine-de 93.3 0.067 2.8E-06 28.9 3.8 63 3-72 40-107 (246)
80 3g2m_A PCZA361.24; SAM-depende 92.9 0.077 3.2E-06 28.6 3.6 63 3-72 85-156 (299)
81 3h2b_A SAM-dependent methyltra 92.8 0.1 4.3E-06 28.0 4.2 66 3-74 44-110 (203)
82 3f4k_A Putative methyltransfer 92.8 0.13 5.3E-06 27.5 4.5 67 3-74 49-122 (257)
83 3hnr_A Probable methyltransfer 92.7 0.18 7.7E-06 26.7 5.3 65 3-74 48-114 (220)
84 2pwy_A TRNA (adenine-N(1)-)-me 92.4 0.15 6.5E-06 27.1 4.6 73 2-77 98-177 (258)
85 2okc_A Type I restriction enzy 92.1 0.23 9.7E-06 26.2 5.2 75 2-76 173-263 (445)
86 3fzg_A 16S rRNA methylase; met 92.1 0.19 8.1E-06 26.6 4.8 69 2-73 51-122 (200)
87 2r6z_A UPF0341 protein in RSP 91.7 0.3 1.2E-05 25.6 5.4 70 2-76 85-171 (258)
88 3ccf_A Cyclopropane-fatty-acyl 91.7 0.22 9.2E-06 26.3 4.7 67 2-75 59-126 (279)
89 3b3j_A Histone-arginine methyl 91.6 0.12 5E-06 27.6 3.3 65 3-73 161-231 (480)
90 3b3f_A Histone-arginine methyl 91.6 0.14 6E-06 27.2 3.7 64 3-72 49-118 (341)
91 1xxl_A YCGJ protein; structura 91.5 0.27 1.1E-05 25.9 5.0 69 2-76 23-97 (239)
92 2p35_A Trans-aconitate 2-methy 91.5 0.13 5.6E-06 27.4 3.4 68 2-74 35-103 (259)
93 3dh0_A SAM dependent methyltra 91.4 0.18 7.7E-06 26.7 4.1 70 2-74 39-114 (219)
94 1xtp_A LMAJ004091AAA; SGPP, st 91.4 0.17 7.1E-06 26.9 3.9 71 2-77 95-169 (254)
95 3lcc_A Putative methyl chlorid 91.2 0.61 2.6E-05 24.1 6.6 63 3-72 69-138 (235)
96 3gru_A Dimethyladenosine trans 91.2 0.19 8.1E-06 26.6 4.0 67 3-75 53-123 (295)
97 3mb5_A SAM-dependent methyltra 91.0 0.71 3E-05 23.7 6.7 71 2-76 95-172 (255)
98 2ex4_A Adrenal gland protein A 91.0 0.2 8.5E-06 26.5 3.9 68 3-75 82-155 (241)
99 1ve3_A Hypothetical protein PH 91.0 0.74 3.1E-05 23.6 6.8 65 3-73 41-110 (227)
100 3l8d_A Methyltransferase; stru 90.7 0.43 1.8E-05 24.8 5.4 68 2-75 55-125 (242)
101 3ege_A Putative methyltransfer 90.4 0.31 1.3E-05 25.5 4.5 67 3-75 37-103 (261)
102 3gu3_A Methyltransferase; alph 90.3 0.74 3.1E-05 23.6 6.3 72 2-77 24-100 (284)
103 3frh_A 16S rRNA methylase; met 90.0 0.59 2.5E-05 24.1 5.7 42 3-50 108-149 (253)
104 2yvl_A TRMI protein, hypotheti 90.0 0.3 1.3E-05 25.6 4.1 70 2-77 93-169 (248)
105 3fut_A Dimethyladenosine trans 89.9 0.29 1.2E-05 25.7 4.0 70 3-77 49-121 (271)
106 3lcv_B Sisomicin-gentamicin re 89.7 0.18 7.5E-06 26.7 2.8 66 3-73 135-205 (281)
107 3dlc_A Putative S-adenosyl-L-m 89.5 0.5 2.1E-05 24.5 4.9 68 3-75 46-120 (219)
108 1p91_A Ribosomal RNA large sub 89.4 0.36 1.5E-05 25.2 4.2 67 3-73 88-155 (269)
109 3e05_A Precorrin-6Y C5,15-meth 89.4 0.47 2E-05 24.6 4.8 44 3-49 43-86 (204)
110 2kw5_A SLR1183 protein; struct 89.4 0.77 3.2E-05 23.5 5.8 65 3-73 32-101 (202)
111 3e8s_A Putative SAM dependent 89.3 0.35 1.5E-05 25.2 4.0 42 3-49 55-96 (227)
112 3lkd_A Type I restriction-modi 89.1 0.9 3.8E-05 23.2 6.0 75 2-76 223-307 (542)
113 2gs9_A Hypothetical protein TT 88.9 0.46 1.9E-05 24.7 4.4 68 2-77 38-106 (211)
114 1vl5_A Unknown conserved prote 88.9 0.58 2.4E-05 24.2 4.9 66 2-73 39-110 (260)
115 1zx0_A Guanidinoacetate N-meth 88.5 0.92 3.9E-05 23.2 5.7 46 2-51 62-107 (236)
116 2yqz_A Hypothetical protein TT 88.4 1.2 5.1E-05 22.6 6.4 67 2-74 41-112 (263)
117 1o54_A SAM-dependent O-methylt 88.4 1.2 5.1E-05 22.5 7.7 72 2-77 114-192 (277)
118 2ipx_A RRNA 2'-O-methyltransfe 88.2 0.67 2.8E-05 23.8 4.9 73 2-76 79-157 (233)
119 1dl5_A Protein-L-isoaspartate 88.2 0.55 2.3E-05 24.3 4.4 69 2-73 77-151 (317)
120 2p7i_A Hypothetical protein; p 87.9 0.47 2E-05 24.6 3.9 64 3-73 45-110 (250)
121 2o57_A Putative sarcosine dime 87.9 0.62 2.6E-05 24.0 4.5 66 2-72 84-156 (297)
122 2ho3_A Oxidoreductase, GFO/IDH 87.8 0.63 2.6E-05 24.0 4.5 72 1-77 1-73 (325)
123 2ar0_A M.ecoki, type I restric 87.7 0.34 1.4E-05 25.3 3.1 74 3-76 172-271 (541)
124 3ofk_A Nodulation protein S; N 87.4 0.74 3.1E-05 23.6 4.7 66 3-75 54-123 (216)
125 3bgv_A MRNA CAP guanine-N7 met 87.2 0.53 2.2E-05 24.3 3.8 70 2-75 36-123 (313)
126 3cgg_A SAM-dependent methyltra 86.9 0.78 3.3E-05 23.5 4.6 66 3-74 49-115 (195)
127 3ou2_A SAM-dependent methyltra 86.5 1.1 4.7E-05 22.7 5.2 69 3-78 49-119 (218)
128 3e23_A Uncharacterized protein 86.5 1 4.4E-05 22.9 5.0 65 3-74 46-110 (211)
129 1i9g_A Hypothetical protein RV 86.1 0.95 4E-05 23.1 4.7 72 2-76 101-181 (280)
130 2i6g_A Putative methyltransfer 86.1 1.7 7.1E-05 21.8 7.0 68 3-75 34-105 (199)
131 2p2s_A Putative oxidoreductase 85.8 0.43 1.8E-05 24.8 2.8 65 10-76 11-77 (336)
132 2zig_A TTHA0409, putative modi 85.8 1.2 5E-05 22.6 5.0 44 3-51 238-281 (297)
133 1zq9_A Probable dimethyladenos 85.7 1.8 7.4E-05 21.7 7.1 65 3-75 31-102 (285)
134 1qyr_A KSGA, high level kasuga 85.6 0.33 1.4E-05 25.4 2.1 68 3-75 24-99 (252)
135 3m2t_A Probable dehydrogenase; 85.0 0.99 4.1E-05 23.0 4.3 75 1-79 5-82 (359)
136 1g60_A Adenine-specific methyl 84.7 1.1 4.6E-05 22.8 4.4 43 3-50 215-257 (260)
137 3jwh_A HEN1; methyltransferase 84.3 2.1 8.7E-05 21.4 6.9 45 2-49 31-75 (217)
138 1eg2_A Modification methylase 84.2 0.89 3.8E-05 23.2 3.8 43 3-50 245-287 (319)
139 2p8j_A S-adenosylmethionine-de 84.1 1.8 7.8E-05 21.6 5.4 70 3-77 26-100 (209)
140 3ocj_A Putative exported prote 83.8 1.7 7.2E-05 21.8 5.1 72 2-77 120-198 (305)
141 3i9f_A Putative type 11 methyl 83.6 0.92 3.9E-05 23.1 3.7 62 3-74 20-83 (170)
142 1boo_A Protein (N-4 cytosine-s 83.4 1.9 8.1E-05 21.5 5.2 42 3-49 255-296 (323)
143 2b25_A Hypothetical protein; s 82.8 1.9 7.9E-05 21.6 5.0 45 2-48 107-151 (336)
144 3ezy_A Dehydrogenase; structur 82.7 1 4.4E-05 22.9 3.7 65 9-75 8-74 (344)
145 1pjz_A Thiopurine S-methyltran 82.6 2.5 0.0001 21.0 5.7 44 2-50 24-67 (203)
146 1xva_A Glycine N-methyltransfe 80.5 2.4 0.0001 21.1 4.9 66 3-73 59-136 (292)
147 3iv6_A Putative Zn-dependent a 80.2 3 0.00013 20.6 5.3 67 2-74 47-118 (261)
148 3c3p_A Methyltransferase; NP_9 80.1 3 0.00013 20.6 5.7 66 3-71 59-131 (210)
149 3khk_A Type I restriction-modi 79.9 2.3 9.6E-05 21.2 4.6 74 3-76 247-339 (544)
150 2g1p_A DNA adenine methylase; 79.9 1.2 4.8E-05 22.7 3.1 36 3-45 30-65 (278)
151 3g07_A 7SK snRNA methylphospha 79.7 2.8 0.00012 20.7 5.0 44 2-48 48-91 (292)
152 1yub_A Ermam, rRNA methyltrans 79.1 0.48 2E-05 24.6 0.9 68 3-76 32-103 (245)
153 2h1r_A Dimethyladenosine trans 78.7 3.3 0.00014 20.4 5.1 65 3-75 45-115 (299)
154 3mgg_A Methyltransferase; NYSG 78.4 2.1 9E-05 21.3 4.1 69 2-74 39-113 (276)
155 1nt2_A Fibrillarin-like PRE-rR 78.3 3.4 0.00014 20.3 5.1 73 2-77 59-137 (210)
156 1lss_A TRK system potassium up 78.3 2.4 1E-04 21.1 4.3 71 2-75 5-78 (140)
157 2glx_A 1,5-anhydro-D-fructose 76.2 2.1 9E-05 21.3 3.6 66 10-77 7-74 (332)
158 1im8_A YECO; methyltransferase 75.1 4.3 0.00018 19.8 7.4 74 3-77 61-138 (244)
159 2oyr_A UPF0341 protein YHIQ; a 75.0 1.9 8E-05 21.6 3.0 70 2-76 90-174 (258)
160 2g1u_A Hypothetical protein TM 74.5 2.6 0.00011 20.9 3.6 68 7-75 23-93 (155)
161 2dpm_A M.dpnii 1, protein (ade 74.4 3.2 0.00013 20.5 4.0 35 3-44 38-72 (284)
162 1vbf_A 231AA long hypothetical 74.0 4.5 0.00019 19.7 4.8 67 2-74 72-142 (231)
163 3opn_A Putative hemolysin; str 73.4 3.6 0.00015 20.2 4.1 67 2-72 39-109 (232)
164 2vdw_A Vaccinia virus capping 72.7 2.9 0.00012 20.6 3.5 42 2-47 50-91 (302)
165 1fbn_A MJ fibrillarin homologu 72.3 5.1 0.00022 19.4 5.6 71 2-75 76-152 (230)
166 1h6d_A Precursor form of gluco 72.2 4.7 0.0002 19.6 4.5 67 9-77 89-162 (433)
167 3cea_A MYO-inositol 2-dehydrog 72.2 3.5 0.00015 20.2 3.9 70 2-75 9-80 (346)
168 3ldu_A Putative methylase; str 71.4 5.4 0.00023 19.3 6.0 45 29-75 259-310 (385)
169 3i23_A Oxidoreductase, GFO/IDH 71.2 3 0.00012 20.6 3.3 67 8-76 7-76 (349)
170 1nw3_A Histone methyltransfera 70.8 5.6 0.00024 19.2 5.0 41 3-46 158-198 (416)
171 2cmg_A Spermidine synthase; tr 70.7 3.5 0.00015 20.2 3.6 53 19-73 88-146 (262)
172 3fpf_A Mtnas, putative unchara 70.4 5.7 0.00024 19.2 6.1 64 2-71 124-193 (298)
173 2gb4_A Thiopurine S-methyltran 70.4 4.1 0.00017 19.9 3.8 41 3-48 71-111 (252)
174 1nkv_A Hypothetical protein YJ 69.9 5.9 0.00025 19.1 7.3 66 2-73 38-110 (256)
175 2pt6_A Spermidine synthase; tr 69.2 4 0.00017 19.9 3.6 69 3-74 119-197 (321)
176 1vlm_A SAM-dependent methyltra 68.6 2.7 0.00011 20.8 2.6 60 3-73 50-109 (219)
177 1i4w_A Mitochondrial replicati 68.5 6.3 0.00026 19.0 5.2 55 2-59 60-117 (353)
178 3l4b_C TRKA K+ channel protien 68.0 2.5 0.00011 21.0 2.3 67 7-74 4-73 (218)
179 3mz0_A Inositol 2-dehydrogenas 68.0 3.9 0.00017 20.0 3.4 69 8-78 7-79 (344)
180 3bzb_A Uncharacterized protein 67.8 6.5 0.00027 18.9 4.6 42 3-48 82-124 (281)
181 3adn_A Spermidine synthase; am 66.9 6.8 0.00029 18.8 5.4 70 3-75 86-166 (294)
182 1jg1_A PIMT;, protein-L-isoasp 66.8 5.1 0.00021 19.4 3.7 68 2-74 93-166 (235)
183 3cc8_A Putative methyltransfer 64.5 7.7 0.00032 18.5 5.3 65 3-73 35-100 (230)
184 1j6u_A UDP-N-acetylmuramate-al 64.1 7.8 0.00033 18.5 5.4 65 2-74 13-79 (469)
185 1uir_A Polyamine aminopropyltr 63.8 4.9 0.00021 19.5 3.2 69 3-74 80-159 (314)
186 1iy9_A Spermidine synthase; ro 62.8 8.2 0.00034 18.4 4.2 72 3-77 78-159 (275)
187 3ggd_A SAM-dependent methyltra 62.6 8 0.00033 18.5 4.1 43 2-49 58-100 (245)
188 3db2_A Putative NADPH-dependen 61.7 6.5 0.00027 18.9 3.5 65 8-75 10-76 (354)
189 2wa2_A Non-structural protein 61.7 7.7 0.00032 18.5 3.9 31 2-36 84-115 (276)
190 3d2l_A SAM-dependent methyltra 60.4 9.2 0.00039 18.1 6.2 62 3-72 36-102 (243)
191 1i1n_A Protein-L-isoaspartate 60.2 9.3 0.00039 18.1 4.6 73 3-78 80-163 (226)
192 2f00_A UDP-N-acetylmuramate--L 59.7 8.1 0.00034 18.4 3.7 63 7-75 23-87 (491)
193 2b2c_A Spermidine synthase; be 59.5 8.6 0.00036 18.3 3.8 69 3-74 111-189 (314)
194 3p2e_A 16S rRNA methylase; met 58.4 10 0.00042 18.0 5.5 41 3-46 27-67 (225)
195 2a14_A Indolethylamine N-methy 56.8 4.6 0.00019 19.6 2.0 42 3-48 58-99 (263)
196 3id6_C Fibrillarin-like rRNA/T 56.1 11 0.00046 17.7 6.9 72 2-75 78-155 (232)
197 3f4l_A Putative oxidoreductase 55.7 11 0.00047 17.7 4.4 73 1-77 2-76 (345)
198 3k0b_A Predicted N6-adenine-sp 55.2 11 0.00048 17.7 6.4 47 29-75 265-316 (393)
199 3e9m_A Oxidoreductase, GFO/IDH 55.0 5.8 0.00024 19.1 2.3 65 9-75 11-76 (330)
200 3evn_A Oxidoreductase, GFO/IDH 54.8 4.1 0.00017 19.9 1.5 69 9-79 11-81 (329)
201 2o4u_X Dimeric dihydrodiol deh 54.0 11 0.00045 17.8 3.5 71 8-80 7-81 (334)
202 1yf3_A DNA adenine methylase; 53.7 3.1 0.00013 20.5 0.7 35 3-45 27-61 (259)
203 2vdv_E TRNA (guanine-N(7)-)-me 53.7 12 0.00051 17.5 5.1 73 2-77 51-139 (246)
204 3l3b_A ES1 family protein; ssg 53.4 4.8 0.0002 19.6 1.7 70 1-76 23-119 (242)
205 1inl_A Spermidine synthase; be 53.3 12 0.00049 17.6 3.6 68 3-73 93-170 (296)
206 2i7c_A Spermidine synthase; tr 52.9 12 0.0005 17.6 3.6 68 3-73 81-158 (283)
207 2egg_A AROE, shikimate 5-dehyd 52.6 10 0.00043 17.9 3.2 67 8-75 146-213 (297)
208 3bus_A REBM, methyltransferase 50.8 14 0.00057 17.3 7.0 66 3-73 64-136 (273)
209 3ec7_A Putative dehydrogenase; 49.6 11 0.00046 17.7 3.0 65 9-75 29-97 (357)
210 3dr5_A Putative O-methyltransf 47.6 15 0.00065 17.0 4.0 68 3-73 59-136 (221)
211 1zh8_A Oxidoreductase; TM0312, 47.3 12 0.00049 17.6 2.8 67 8-76 23-93 (340)
212 2aot_A HMT, histamine N-methyl 47.2 16 0.00066 17.0 4.6 74 2-75 54-144 (292)
213 3dli_A Methyltransferase; PSI- 45.6 16 0.00069 16.9 3.4 65 3-75 44-110 (240)
214 2hmt_A YUAA protein; RCK, KTN, 44.8 14 0.00057 17.3 2.9 63 9-73 12-77 (144)
215 3e18_A Oxidoreductase; dehydro 44.1 18 0.00074 16.7 4.6 68 7-78 9-78 (359)
216 3ist_A Glutamate racemase; str 44.0 15 0.00064 17.0 3.0 34 1-36 4-40 (269)
217 1yzh_A TRNA (guanine-N(7)-)-me 42.2 19 0.0008 16.6 4.8 71 4-78 45-123 (214)
218 2p41_A Type II methyltransfera 41.6 19 0.00081 16.5 3.6 31 2-35 84-114 (305)
219 1cyd_A Carbonyl reductase; sho 41.5 16 0.00069 16.9 2.9 65 7-72 12-82 (244)
220 3euw_A MYO-inositol dehydrogen 40.7 20 0.00084 16.4 3.8 70 2-76 5-76 (344)
221 3moi_A Probable dehydrogenase; 39.9 19 0.00079 16.6 3.0 65 9-76 8-75 (387)
222 3e82_A Putative oxidoreductase 39.9 21 0.00087 16.4 3.6 70 1-77 7-78 (364)
223 1r18_A Protein-L-isoaspartate( 39.8 21 0.00087 16.4 5.2 47 2-48 86-135 (227)
224 1u2z_A Histone-lysine N-methyl 39.5 21 0.00088 16.3 4.9 41 3-46 245-285 (433)
225 1o9g_A RRNA methyltransferase; 39.3 21 0.00089 16.3 4.3 43 2-47 53-97 (250)
226 1xj5_A Spermidine synthase 1; 39.2 21 0.00089 16.3 3.8 70 3-75 123-203 (334)
227 3jyo_A Quinate/shikimate dehyd 39.0 21 0.0009 16.3 4.4 69 8-76 132-204 (283)
228 3kux_A Putative oxidoreductase 38.3 22 0.00093 16.2 3.8 65 8-77 12-78 (352)
229 1yde_A Retinal dehydrogenase/r 38.0 21 0.00088 16.3 3.0 64 7-71 14-87 (270)
230 2ehd_A Oxidoreductase, oxidore 37.5 16 0.00069 16.9 2.4 62 10-72 13-84 (234)
231 1p3d_A UDP-N-acetylmuramate--a 37.4 23 0.00096 16.2 3.7 63 7-75 22-86 (475)
232 3eld_A Methyltransferase; flav 37.4 23 0.00096 16.2 6.8 17 2-18 83-99 (300)
233 3fhl_A Putative oxidoreductase 36.9 23 0.00098 16.1 4.6 69 1-76 5-75 (362)
234 2i62_A Nicotinamide N-methyltr 36.8 20 0.00083 16.5 2.7 42 3-48 59-100 (265)
235 2oxt_A Nucleoside-2'-O-methylt 36.6 24 0.00099 16.1 3.6 32 2-36 76-107 (265)
236 3fwz_A Inner membrane protein 35.3 24 0.001 16.0 2.9 66 8-75 12-80 (140)
237 3gcz_A Polyprotein; flavivirus 33.9 26 0.0011 15.9 3.4 32 2-37 92-124 (282)
238 1ej0_A FTSJ; methyltransferase 32.8 27 0.0012 15.8 4.2 70 2-79 24-103 (180)
239 3l9w_A Glutathione-regulated p 32.2 28 0.0012 15.7 3.8 65 8-74 9-76 (413)
240 1uls_A Putative 3-oxoacyl-acyl 32.0 28 0.0012 15.7 3.3 65 7-72 10-83 (245)
241 3dou_A Ribosomal RNA large sub 31.3 29 0.0012 15.6 3.3 68 2-80 27-107 (191)
242 2nvu_B Maltose binding protein 30.7 21 0.00089 16.3 2.0 36 7-43 415-451 (805)
243 3gvc_A Oxidoreductase, probabl 30.6 21 0.0009 16.3 2.0 61 10-71 37-108 (277)
244 2o07_A Spermidine synthase; st 29.8 31 0.0013 15.5 3.6 68 3-73 98-175 (304)
245 1x19_A CRTF-related protein; m 29.7 31 0.0013 15.5 7.4 73 3-79 193-269 (359)
246 2ph3_A 3-oxoacyl-[acyl carrier 29.6 30 0.0013 15.6 2.6 65 8-72 7-86 (245)
247 2yut_A Putative short-chain ox 28.6 33 0.0014 15.4 2.9 67 2-72 1-72 (207)
248 3hvi_A Catechol O-methyltransf 27.9 34 0.0014 15.3 4.4 45 3-49 61-105 (221)
249 3grp_A 3-oxoacyl-(acyl carrier 27.6 26 0.0011 15.9 2.0 63 9-72 34-107 (266)
250 2px2_A Genome polyprotein [con 27.2 35 0.0015 15.2 3.8 31 3-36 76-106 (269)
251 3dty_A Oxidoreductase, GFO/IDH 27.2 24 0.001 16.0 1.8 50 26-75 40-95 (398)
252 2yxe_A Protein-L-isoaspartate 26.1 36 0.0015 15.1 4.5 72 2-76 79-156 (215)
253 2nyu_A Putative ribosomal RNA 24.5 39 0.0017 15.0 2.8 20 2-21 24-43 (196)
254 3g5t_A Trans-aconitate 3-methy 23.6 41 0.0017 14.9 6.7 71 3-75 39-122 (299)
255 3bkx_A SAM-dependent methyltra 23.5 41 0.0017 14.9 6.6 72 2-75 45-131 (275)
256 3dii_A Short-chain dehydrogena 22.9 42 0.0018 14.8 2.4 65 7-72 7-81 (247)
257 3c1a_A Putative oxidoreductase 22.5 20 0.00084 16.4 0.7 62 9-75 16-79 (315)
258 3d3w_A L-xylulose reductase; u 22.4 44 0.0018 14.7 3.8 65 7-72 12-82 (244)
259 3c85_A Putative glutathione-re 22.2 44 0.0018 14.7 2.4 68 7-75 43-114 (183)
260 3d4o_A Dipicolinate synthase s 21.8 45 0.0019 14.7 3.9 63 9-76 161-223 (293)
261 2g72_A Phenylethanolamine N-me 21.6 37 0.0016 15.1 1.9 42 3-48 74-115 (289)
262 2plw_A Ribosomal RNA methyltra 21.3 46 0.0019 14.6 4.0 35 2-37 24-58 (201)
263 2wsb_A Galactitol dehydrogenas 21.2 45 0.0019 14.7 2.3 62 9-71 18-90 (254)
264 3hp7_A Hemolysin, putative; st 21.0 47 0.002 14.6 4.2 65 3-72 88-157 (291)
265 1ydw_A AX110P-like protein; st 20.7 47 0.002 14.6 2.6 64 10-75 13-81 (362)
No 1
>1dct_A Protein (modification methylase HAEIII); enzyme, cytosine methylase, transferase/DNA complex; HET: DNA C49 5CM; 2.80A {Haemophilus influenzae biotypeaegyptius} SCOP: c.66.1.26
Probab=99.97 E-value=7.6e-33 Score=184.23 Aligned_cols=78 Identities=33% Similarity=0.674 Sum_probs=75.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCC
Q ss_conf 26964107947889999872220895699998069555112220012332321158975365788719998689975436
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~PCq~fS~ 81 (83)
|||+|||||+||+++||+++ |+++++++|+|++|++||++|||.....+||++++.+++|++|+|+||||||+||+
T Consensus 1 ~kv~~lF~G~Gg~~~gl~~a----G~~~~~a~e~d~~a~~~~~~N~~~~~~~~Di~~~~~~~~~~~D~~~~g~PCq~fS~ 76 (324)
T 1dct_A 1 MNLISLFSGAGGLDLGFQKA----GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPPCQSWSE 76 (324)
T ss_dssp CEEEEESCSSCHHHHHHHHH----TCEEEEEEECCHHHHHHHHHHCCSEEEESCTTTSCGGGSCCCSEEEECCCCTTTSS
T ss_pred CEEEEECCCCCHHHHHHHHC----CCEEEEEEECCHHHHHHHHHHCCCCCCCCCHHHCCHHHCCCCCEEEECCCCCCHHH
T ss_conf 90999480747899999987----99799999679999999998789997249824599857675365773699842233
Q ss_pred CC
Q ss_conf 89
Q gi|254780516|r 82 AG 83 (83)
Q Consensus 82 aG 83 (83)
||
T Consensus 77 ag 78 (324)
T 1dct_A 77 GG 78 (324)
T ss_dssp SS
T ss_pred HC
T ss_conf 02
No 2
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=99.97 E-value=6e-32 Score=179.74 Aligned_cols=77 Identities=48% Similarity=0.950 Sum_probs=73.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCC
Q ss_conf 26964107947889999872220895699998069555112220012332321158975365788719998689975436
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~PCq~fS~ 81 (83)
||++|||||+||+++||+++ |+++++++|+|+.|++||++|||+++ ++||++++.++++++|+|+||||||+||.
T Consensus 12 lr~~~lFsG~GG~~~gl~~a----G~~~~~a~e~d~~a~~~~~~N~~~~~-~~Di~~~~~~~~~~~Dll~gg~PCQ~fS~ 86 (327)
T 2c7p_A 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNEKTIPDHDILCAGFPCQAFSI 86 (327)
T ss_dssp CEEEEETCTTTHHHHHHHHT----TCEEEEEECCCHHHHHHHHHHHSCCC-BSCGGGSCGGGSCCCSEEEEECCCTTTCT
T ss_pred CEEEEECCCCCHHHHHHHHC----CCEEEEEEECCHHHHHHHHHHCCCCC-CCCHHHCCHHHCCCCCEEEECCCCCCCCC
T ss_conf 81899680746899999987----99799999389999999998779997-57532388514777567997589877342
Q ss_pred CC
Q ss_conf 89
Q gi|254780516|r 82 AG 83 (83)
Q Consensus 82 aG 83 (83)
||
T Consensus 87 ag 88 (327)
T 2c7p_A 87 SG 88 (327)
T ss_dssp TS
T ss_pred CC
T ss_conf 66
No 3
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=99.97 E-value=1.6e-31 Score=177.55 Aligned_cols=80 Identities=28% Similarity=0.614 Sum_probs=73.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-CCEEEEEECCCCC--CCEEEEECCCCCC
Q ss_conf 269641079478899998722208956999980695551122200123323-2115897536578--8719998689975
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDIP--DHDVLLAGFPCQP 78 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-~~DI~~~~~~~~~--~~D~l~gG~PCq~ 78 (83)
||++|||||+||+++||++++ .++++++++|+|++|++||++|||++.+ .+||+++..++++ ++|+|+||||||+
T Consensus 3 lkvidLFsG~GG~~~gl~~aG--~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~di~~~~~~~~~~~~~Dll~ggpPCQ~ 80 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESC--IPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQP 80 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHT--CSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC---
T ss_pred CEEEEECCCHHHHHHHHHHCC--CCCEEEEEEECCHHHHHHHHHHCCCCCEEECCHHHCCHHHCCCCCCCEEEEECCCCC
T ss_conf 779991827648999999749--998699999899999999999789997540753349895758778677997289986
Q ss_pred CCCCC
Q ss_conf 43689
Q gi|254780516|r 79 FSQAG 83 (83)
Q Consensus 79 fS~aG 83 (83)
||.||
T Consensus 81 fS~ag 85 (343)
T 1g55_A 81 FTRIG 85 (343)
T ss_dssp -----
T ss_pred CCHHH
T ss_conf 06455
No 4
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural genomics, protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=99.96 E-value=2.3e-31 Score=176.85 Aligned_cols=78 Identities=32% Similarity=0.594 Sum_probs=71.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-CCEEEEEECCCC-------CCCEEEEEC
Q ss_conf 269641079478899998722208956999980695551122200123323-211589753657-------887199986
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDI-------PDHDVLLAG 73 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-~~DI~~~~~~~~-------~~~D~l~gG 73 (83)
||++|||||+||+++||++| |+++++++|+|++|++||++|||++.. .+||++++.+.+ +++|+|+||
T Consensus 3 l~vidlFsG~GG~~~g~~~a----G~~~~~a~e~d~~a~~~y~~N~~~~~~~~~di~~~~~~~~~~~~~~~~~vDvl~gg 78 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA----GFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGG 78 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH----TCEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEEC
T ss_pred CEEEEECCCCCHHHHHHHHC----CCEEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCEEEEC
T ss_conf 70999482846899999987----99399999789999999998879997358853348999975540258887779968
Q ss_pred CCCCCCCCCC
Q ss_conf 8997543689
Q gi|254780516|r 74 FPCQPFSQAG 83 (83)
Q Consensus 74 ~PCq~fS~aG 83 (83)
||||+||+||
T Consensus 79 pPCQ~fS~ag 88 (376)
T 3g7u_A 79 PPCQGFSSIG 88 (376)
T ss_dssp CCCCTTC---
T ss_pred CCCCCCCCCC
T ss_conf 8988734147
No 5
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=99.96 E-value=5.4e-31 Score=174.94 Aligned_cols=79 Identities=53% Similarity=0.879 Sum_probs=69.1
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC---C-CCCCEEEEEECC--------------
Q ss_conf 9269641079478899998722208956999980695551122200123---3-232115897536--------------
Q gi|254780516|r 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---T-LIFGDIAKIKTQ-------------- 62 (83)
Q Consensus 1 ml~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~---~-~~~~DI~~~~~~-------------- 62 (83)
++||+|||||+||+++||+++ |+++++++|||++|++||++||+. . ...+||++++..
T Consensus 88 ~f~vidLFaG~GGl~~G~e~a----G~~~v~a~E~d~~A~~ty~~N~~~~p~~~~~~~Di~~i~~~~~~~~~~~~~~~~~ 163 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI----GGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT----TEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHC----CCEEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHCCHHHCCCCCCCHHHHHH
T ss_conf 998899792708799999987----9959999968999999999865899864363564765661010122210123332
Q ss_pred --CCCCCEEEEECCCCCCCCCCC
Q ss_conf --578871999868997543689
Q gi|254780516|r 63 --DIPDHDVLLAGFPCQPFSQAG 83 (83)
Q Consensus 63 --~~~~~D~l~gG~PCq~fS~aG 83 (83)
++|++|+|+||||||+||+||
T Consensus 164 ~~~~p~vDvl~gGpPCQ~FS~AG 186 (482)
T 3me5_A 164 RQHIPEHDVLLAGFPCQPFSLAG 186 (482)
T ss_dssp HHHSCCCSEEEEECCCCCC----
T ss_pred HCCCCCCCEEEECCCCCCCCHHC
T ss_conf 11388778799779983004231
No 6
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=99.95 E-value=3.6e-29 Score=165.78 Aligned_cols=81 Identities=21% Similarity=0.363 Sum_probs=71.1
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-CCCEEEEEECC---CCCCCEEEEECCCC
Q ss_conf 926964107947889999872220895699998069555112220012332-32115897536---57887199986899
Q gi|254780516|r 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQ---DIPDHDVLLAGFPC 76 (83)
Q Consensus 1 ml~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-~~~DI~~~~~~---~~~~~D~l~gG~PC 76 (83)
.||++|||||+||+++||++|| ..+++++++|+|+.|+++|++|||+.. +.+||+++..+ +.+++|+|+|||||
T Consensus 16 ~lkvl~LFsG~GG~~~gl~~aG--~~~~~v~a~e~~~~a~~~y~~n~~~~~~~~~Di~~~~~~~~~~~~~~Dil~ggpPC 93 (295)
T 2qrv_A 16 PIRVLSLFDGIATGLLVLKDLG--IQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGGSPC 93 (295)
T ss_dssp CEEEEEETCTTTHHHHHHHHTT--BCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEECCCC
T ss_pred CCEEEEECCCCCHHHHHHHHCC--CCEEEEEEEECCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCC
T ss_conf 9759997957447999999859--98479999978999999999878999770366015740244567767399726888
Q ss_pred CCCCCCC
Q ss_conf 7543689
Q gi|254780516|r 77 QPFSQAG 83 (83)
Q Consensus 77 q~fS~aG 83 (83)
|+||.||
T Consensus 94 Q~fS~ag 100 (295)
T 2qrv_A 94 NDLSIVN 100 (295)
T ss_dssp GGGBTTC
T ss_pred CCCCHHC
T ss_conf 7732011
No 7
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=99.54 E-value=2.8e-16 Score=101.03 Aligned_cols=62 Identities=16% Similarity=0.173 Sum_probs=48.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEE---CCCCCCCEEEEECCCCCC
Q ss_conf 26964107947889999872220895699998069555112220012332321158975---365788719998689975
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK---TQDIPDHDVLLAGFPCQP 78 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~---~~~~~~~D~l~gG~PCq~ 78 (83)
|||||||+|||+..++|+. ++.|+|+.+.+ +++||+++. .++++++|+|+||||||+
T Consensus 190 ~rVlsLFdgi~~g~~~l~~----------~~~~~~~~~i~----------~~gDV~~i~~~~i~e~g~~DlliGG~PCq~ 249 (386)
T 2pv0_B 190 VRVLSLFEDIKKELTSLGF----------LESGSDPGQLK----------HVVDVTDTVRKDVEEWGPFDLVYGATPPLG 249 (386)
T ss_dssp CCEEEESSCCHHHHHHTTS----------SCSSCCSCSEE----------EESCCTTCCHHHHHHSCCCSEEEEECCCTT
T ss_pred CEEEEEECCCCCHHHHHHH----------HHHCCCCCCEE----------ECHHHHHHHHHHHHHCCCCCEEEECCCCCC
T ss_conf 5799853475420334345----------55204755212----------606545301432423577674774799866
Q ss_pred CCCCC
Q ss_conf 43689
Q gi|254780516|r 79 FSQAG 83 (83)
Q Consensus 79 fS~aG 83 (83)
||+++
T Consensus 250 fS~~d 254 (386)
T 2pv0_B 250 HTCDR 254 (386)
T ss_dssp TCSCS
T ss_pred CCCCC
T ss_conf 64558
No 8
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=99.51 E-value=5.6e-16 Score=99.57 Aligned_cols=62 Identities=16% Similarity=0.245 Sum_probs=47.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEE---ECCCCCCCEEEEECCCCCC
Q ss_conf 2696410794788999987222089569999806955511222001233232115897---5365788719998689975
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI---KTQDIPDHDVLLAGFPCQP 78 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~---~~~~~~~~D~l~gG~PCq~ 78 (83)
|||+|||+||++ |++.+ ++ +++|+|+.+.+ +++||+++ +.++++++|+|+||||||+
T Consensus 34 ~rvlsLF~Gi~~---G~~~l----g~---~~~e~d~~~i~----------~~~Dv~~i~~~~~~~~g~~Dlv~GG~PCq~ 93 (230)
T 2qrv_B 34 VRVLSLFEDIKK---ELTSL----GF---LESGSDPGQLK----------HVVDVTDTVRKDVEEWGPFDLVYGATPPLG 93 (230)
T ss_dssp CCEEEESSCCTT---TTTTT----TS---CC-----CCEE----------EESCCTTCCHHHHHHTCCCSEEEEECCCTT
T ss_pred CEEEECCCCCCC---CHHHH----HH---HHEEECCCCEE----------ECHHHHHHHHHHHHHCCCCCEEECCCCCCC
T ss_conf 458774576100---22451----34---32320578442----------610677767876642587337850688776
Q ss_pred CCCCC
Q ss_conf 43689
Q gi|254780516|r 79 FSQAG 83 (83)
Q Consensus 79 fS~aG 83 (83)
||.++
T Consensus 94 ~S~~~ 98 (230)
T 2qrv_B 94 HTCDR 98 (230)
T ss_dssp TSSCS
T ss_pred CCEEC
T ss_conf 32038
No 9
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 2zzm_A*
Probab=98.43 E-value=2.7e-07 Score=55.92 Aligned_cols=67 Identities=18% Similarity=0.391 Sum_probs=48.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEEC--CC-CCCCEEEEECCC
Q ss_conf 69641079478899998722208956999980695551122200123323211589753--65-788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT--QD-IPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~--~~-~~~~D~l~gG~P 75 (83)
+|+|+|||+|++++.+. +...|.++|+++.|.+..+.|......-+.|+-+.. .+ -+++|.++.++|
T Consensus 198 ~vlD~f~g~G~~~i~~~------~~~~v~a~d~n~~a~~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~D~Ii~~~P 267 (336)
T 2yx1_A 198 VVVDMFAGVGPFSIACK------NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLP 267 (336)
T ss_dssp EEEETTCTTSHHHHHTT------TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCT
T ss_pred EEEEECCCCCHHHHHCC------CCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCEEEECCH
T ss_conf 89996576467665313------55169999799999999999999829987589995753454568749996580
No 10
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structural genomics; HET: SAH; 2.20A {Pyrococcus horikoshii OT3} SCOP: c.66.1.32
Probab=98.42 E-value=7.8e-07 Score=53.65 Aligned_cols=72 Identities=13% Similarity=0.086 Sum_probs=51.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCC-CCCEEEEECCCCCC
Q ss_conf 69641079478899998722208956999980695551122200123323211589753657-88719998689975
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI-PDHDVLLAGFPCQP 78 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~-~~~D~l~gG~PCq~ 78 (83)
+++|+|||.|++.+++... +...|.++|+|+.+.+..+.|........++..-+..++ .++|+++.-||+-.
T Consensus 52 ~vlDlg~G~G~l~i~a~~~----g~~~v~~vDid~~~~~~a~~N~~~~~~~~~~~~~d~~~~~~~~D~ii~npP~~~ 124 (207)
T 1wy7_A 52 VVADLGAGTGVLSYGALLL----GAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNPPFGS 124 (207)
T ss_dssp EEEEETCTTCHHHHHHHHT----TCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCCCCSEEEECCCCSS
T ss_pred EEEECCCCCCHHHHHHHHC----CCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCEEECCCCCCH
T ss_conf 8999134256999999974----998699987989999999999998399827997667886146546444888520
No 11
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.28 E-value=4.8e-07 Score=54.71 Aligned_cols=69 Identities=20% Similarity=0.324 Sum_probs=50.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC------CCCCEEEEEECCCCCCCEEEEECCCC
Q ss_conf 696410794788999987222089569999806955511222001233------23211589753657887199986899
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGDIAKIKTQDIPDHDVLLAGFPC 76 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~------~~~~DI~~~~~~~~~~~D~l~gG~PC 76 (83)
+|+|+|||+|.+.+.+.... +...|+++|++|.|.+..+.|.... .+++|.+++..+ ..+|.++.++|=
T Consensus 122 ~VlDl~aG~G~~~i~~ak~~---~~~~V~aiDinp~av~~l~~N~~~N~v~n~~~i~~D~r~~~~~--~~fD~Vimn~p~ 196 (272)
T 3a27_A 122 VVVDMFAGIGYFTIPLAKYS---KPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELK--DVADRVIMGYVH 196 (272)
T ss_dssp EEEETTCTTTTTHHHHHHHT---CCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCT--TCEEEEEECCCS
T ss_pred EEEEECCCCCHHHHHHHHCC---CCEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC--CCCCEEEECCCC
T ss_conf 99993786588999987506---9509999959999999999999984999759992776534557--888899978951
No 12
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.25 E-value=9.7e-07 Score=53.17 Aligned_cols=66 Identities=18% Similarity=0.216 Sum_probs=52.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-CCCEEEEEECCCCCCCEEEEECCCC
Q ss_conf 6964107947889999872220895699998069555112220012332-3211589753657887199986899
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIPDHDVLLAGFPC 76 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-~~~DI~~~~~~~~~~~D~l~gG~PC 76 (83)
+|+||+||.|.+.+++... +.+.|.++|+|+.+.++.+.|.++.. ..+|+.+++ .++|+++.-||=
T Consensus 54 ~VLDlGcGtG~l~i~a~~~----ga~~V~~vDid~~a~~~a~~N~~~~~~~~~d~~~~~----~~fD~Vi~NPPf 120 (200)
T 1ne2_A 54 SVIDAGTGNGILACGSYLL----GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS----GKYDTWIMNPPF 120 (200)
T ss_dssp EEEEETCTTCHHHHHHHHT----TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC----CCEEEEEECCCC
T ss_pred EEEECCCCHHHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEHHHCC----CCCCEEEECCCC
T ss_conf 8998757510999999967----998796750899999999998985785376521057----754889877986
No 13
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protein structure initiative, midwest center for structural genomics; HET: MSE; 2.05A {Escherichia coli K12} SCOP: c.66.1.46
Probab=98.24 E-value=5.2e-07 Score=54.51 Aligned_cols=71 Identities=17% Similarity=0.214 Sum_probs=49.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC------CCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 2696410794788999987222089569999806955511222001233------2321158975365788719998689
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~------~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
.+++|||||-|.+. ++.+- .|.+.|.++|.++.+.++.+.|.... .+.+|+.+.-.+.-..+|+++.-||
T Consensus 56 ~~vLDLfaGsG~lg--iEals--RGa~~v~fVE~~~~a~~~l~~N~~~~~~~~~~ii~~d~~~~l~~~~~~fDlIflDPP 131 (202)
T 2fpo_A 56 AQCLDCFAGSGALG--LEALS--RYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP 131 (202)
T ss_dssp CEEEETTCTTCHHH--HHHHH--TTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS
T ss_pred CEEEECCCCCCHHH--HHHHC--CCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCCEEEECCC
T ss_conf 86998887855889--99870--799886899970333567887898746355359953245655412776668997699
Q ss_pred C
Q ss_conf 9
Q gi|254780516|r 76 C 76 (83)
Q Consensus 76 C 76 (83)
=
T Consensus 132 Y 132 (202)
T 2fpo_A 132 F 132 (202)
T ss_dssp S
T ss_pred C
T ss_conf 8
No 14
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.22 E-value=1.9e-06 Score=51.75 Aligned_cols=72 Identities=19% Similarity=0.217 Sum_probs=49.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCC--------CEEEEEEC--CCCCCCEEEE
Q ss_conf 2696410794788999987222089569999806955511222001233232--------11589753--6578871999
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--------GDIAKIKT--QDIPDHDVLL 71 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~--------~DI~~~~~--~~~~~~D~l~ 71 (83)
-+++|||||-|. +|+|.+- -|.+.|.++|.++.|+++.+.|....... .|+.+... ..-+.+|+++
T Consensus 55 ~~~LDLFaGSG~--lglEAlS--RGA~~v~fVE~~~~a~~~l~~N~~~l~~~~~~~~~~~~d~~~~l~~~~~~~~fDlIF 130 (201)
T 2ift_A 55 SECLDGFAGSGS--LGFEALS--RQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVF 130 (201)
T ss_dssp CEEEETTCTTCH--HHHHHHH--TTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEE
T ss_pred CEEEECCCCCCH--HHHHHHH--CCCCEEEEEEECHHHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHCCCCCCCCEEE
T ss_conf 879987888289--8999998--899399999740557789999999838663200232034565543002467665588
Q ss_pred ECCCCC
Q ss_conf 868997
Q gi|254780516|r 72 AGFPCQ 77 (83)
Q Consensus 72 gG~PCq 77 (83)
.-||=.
T Consensus 131 lDPPY~ 136 (201)
T 2ift_A 131 LDPPFH 136 (201)
T ss_dssp ECCCSS
T ss_pred ECCCCC
T ss_conf 579755
No 15
>2esr_A Methyltransferase; structural genomics, hypothetical protein, PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes MGAS10394} SCOP: c.66.1.46
Probab=98.17 E-value=9.1e-07 Score=53.31 Aligned_cols=69 Identities=20% Similarity=0.239 Sum_probs=48.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-------CCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 6964107947889999872220895699998069555112220012332-------321158975365788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-------~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
+|+|||||.|.+.+.+ +. .+.+.|.++|.++.+++..+.|..... ..+|+.++-...-.++|+++..||
T Consensus 34 ~vLDl~~GsG~~~iea--~~--r~a~~v~~ve~~~~a~~~~~~n~~~~~~~~~v~ii~~D~~~~l~~~~~~fDiI~~DPP 109 (177)
T 2esr_A 34 RVLDLFAGSGGLAIEA--VS--RGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPP 109 (177)
T ss_dssp EEEEETCTTCHHHHHH--HH--TTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCS
T ss_pred EEEECCEEHHHHHHHH--HH--CCCCCCEEEECHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCEEEECCC
T ss_conf 7999950379999999--97--3862016783428899988875765135551024531155554313467886887997
No 16
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} SCOP: c.66.1.47 PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.15 E-value=4.5e-06 Score=49.81 Aligned_cols=70 Identities=21% Similarity=0.302 Sum_probs=49.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-------CCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 6964107947889999872220895699998069555112220012332-------321158975365788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-------~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
+|+|+|||+|++++-+-.. +...|.++|+++.|.+..+.|..... +.+|.+++..+ ..+|.++.+.|
T Consensus 128 ~VlDl~aG~G~~~l~~a~~----~~~~V~avD~n~~a~~~~~~N~~~n~~~~~v~~~~~D~~~~~~~--~~~D~Vim~~p 201 (278)
T 2frn_A 128 LVVDMFAGIGHLSLPIAVY----GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGE--NIADRILMGYV 201 (278)
T ss_dssp EEEETTCTTTTTHHHHHHH----TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCC--SCEEEEEECCC
T ss_pred EEEECCCCCCHHHHHHHHH----CCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCC--CCCCEEEECCC
T ss_conf 8999177051999999997----49869999799999999999999809998489996819994466--68869998998
Q ss_pred CCC
Q ss_conf 975
Q gi|254780516|r 76 CQP 78 (83)
Q Consensus 76 Cq~ 78 (83)
..+
T Consensus 202 ~~~ 204 (278)
T 2frn_A 202 VRT 204 (278)
T ss_dssp SSG
T ss_pred CCH
T ss_conf 526
No 17
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus HB8} SCOP: c.66.1.46
Probab=98.09 E-value=3.1e-06 Score=50.65 Aligned_cols=68 Identities=19% Similarity=0.276 Sum_probs=46.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECC--------CCCCCEEEEECC
Q ss_conf 696410794788999987222089569999806955511222001233232115897536--------578871999868
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ--------DIPDHDVLLAGF 74 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~--------~~~~~D~l~gG~ 74 (83)
+++|||||.|.+.+.+-.. +.+++ ++|+|+.+.+..+.|....-....+...+.. .-..+|+++.-|
T Consensus 44 ~vLDl~~G~G~~~i~a~~~----ga~vv-~vD~~~~ai~~~~~N~~~~g~~~~v~~~~~d~~~~~~~~~~~~fDlI~~DP 118 (171)
T 1ws6_A 44 RFLDPFAGSGAVGLEAASE----GWEAV-LVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp EEEEETCSSCHHHHHHHHT----TCEEE-EECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred EEEECCCCHHHHHHHHHHC----CCCCC-CEECCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCEEEEEECC
T ss_conf 8999620678999999980----89530-060687899999987886066555999778987555553388557999879
Q ss_pred C
Q ss_conf 9
Q gi|254780516|r 75 P 75 (83)
Q Consensus 75 P 75 (83)
|
T Consensus 119 P 119 (171)
T 1ws6_A 119 P 119 (171)
T ss_dssp C
T ss_pred C
T ss_conf 9
No 18
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.06 E-value=9.8e-06 Score=48.13 Aligned_cols=75 Identities=13% Similarity=0.182 Sum_probs=52.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-------CCEEEEEEC---CCCCCCEEEE
Q ss_conf 269641079478899998722208956999980695551122200123323-------211589753---6578871999
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-------FGDIAKIKT---QDIPDHDVLL 71 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-------~~DI~~~~~---~~~~~~D~l~ 71 (83)
-||+|+|||.|++++.+... +.+.|.++|+++.|.+..+.|...... .+|+.+.-. +.-..+|+++
T Consensus 219 ~~VLDl~~g~G~~si~aa~~----ga~~V~~vD~s~~al~~a~~N~~~Ngl~~~~~~~~~D~~~~l~~~~~~~~~FD~Ii 294 (396)
T 2as0_A 219 DRVLDVFTYTGGFAIHAAIA----GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp CEEEETTCTTTHHHHHHHHT----TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEE
T ss_conf 76988178778889999977----99746887188889999999999839974556996629888788886078998799
Q ss_pred ECCCCCCCC
Q ss_conf 868997543
Q gi|254780516|r 72 AGFPCQPFS 80 (83)
Q Consensus 72 gG~PCq~fS 80 (83)
.-|||-.-|
T Consensus 295 ~DpP~~~~~ 303 (396)
T 2as0_A 295 LDPPAFVQH 303 (396)
T ss_dssp ECCCCSCSS
T ss_pred ECCHHHCCC
T ss_conf 765121156
No 19
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis V583} SCOP: c.66.1.46
Probab=98.02 E-value=1.5e-05 Score=47.23 Aligned_cols=69 Identities=23% Similarity=0.272 Sum_probs=47.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-------CCCEEEEEEC---CCCCCCEEEEE
Q ss_conf 6964107947889999872220895699998069555112220012332-------3211589753---65788719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFGDIAKIKT---QDIPDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-------~~~DI~~~~~---~~~~~~D~l~g 72 (83)
+++|||||-|++.+ +.+- .|.+.|.++|.++.+.++.+.|..... +.+|+.+.-. +.-.++|+++.
T Consensus 47 ~vLDlf~GsG~~~~--ea~s--rGa~~v~~Ve~~~~~~~~~~~N~~~~~~~~~~~i~~~d~~~~l~~~~~~~~~fDlIfl 122 (187)
T 2fhp_A 47 MALDLYSGSGGLAI--EAVS--RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp EEEETTCTTCHHHH--HHHH--TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEECCCCCCHHHH--HHHH--CCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCCEEEE
T ss_conf 89998887378999--9997--5888358999424677676655542024564178861078887764302676535997
Q ss_pred CCC
Q ss_conf 689
Q gi|254780516|r 73 GFP 75 (83)
Q Consensus 73 G~P 75 (83)
-||
T Consensus 123 DPP 125 (187)
T 2fhp_A 123 DPP 125 (187)
T ss_dssp CCC
T ss_pred CCC
T ss_conf 898
No 20
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.96 E-value=2.2e-05 Score=46.38 Aligned_cols=71 Identities=23% Similarity=0.420 Sum_probs=53.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-------CCCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 69641079478899998722208956999980695551122200123-------32321158975365788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-------~~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
+|+|+|||.|++.+.+.+. +. .|.++|+++.+.+..++|... +.+.+|+.++.. -.+.|+++..||
T Consensus 81 ~vlD~gcG~G~~~~~la~~----~~-~v~~iD~s~~~i~~a~~n~~~~~~~~~i~~~~~D~~~~~~--~~~~D~i~~~pp 153 (241)
T 3gdh_A 81 VVVDAFCGVGGNTIQFALT----GM-RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS--FLKADVVFLSPP 153 (241)
T ss_dssp EEEETTCTTSHHHHHHHHT----TC-EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG--GCCCSEEEECCC
T ss_pred EEEECCCCCCHHHHHHHHC----CC-EEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHH--CCCCEEEEECCC
T ss_conf 8999378736889999967----99-8999989778889999999984998743999764866414--378449998378
Q ss_pred CCCCC
Q ss_conf 97543
Q gi|254780516|r 76 CQPFS 80 (83)
Q Consensus 76 Cq~fS 80 (83)
++..+
T Consensus 154 ~~~~~ 158 (241)
T 3gdh_A 154 WGGPD 158 (241)
T ss_dssp CSSGG
T ss_pred CCCCC
T ss_conf 78875
No 21
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51
Probab=97.85 E-value=3.1e-05 Score=45.61 Aligned_cols=72 Identities=13% Similarity=0.113 Sum_probs=50.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC--------CCCEEEEEEC---CCCCCCEEEE
Q ss_conf 6964107947889999872220895699998069555112220012332--------3211589753---6578871999
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--------IFGDIAKIKT---QDIPDHDVLL 71 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~--------~~~DI~~~~~---~~~~~~D~l~ 71 (83)
||+|||||.||+++.+... +.+.|.++|+++.+.+..+.|..-.. +.+|+.++-. ++-..+|+++
T Consensus 215 rVLDlfs~tGgfsl~aa~~----gA~~V~~vD~s~~a~~~a~~N~~~N~l~~~~~~~~~~D~~~~L~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 215 TVLNLFSYTAAFSVAAAMG----GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp EEEEETCTTTHHHHHHHHT----TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEECCCCCHHHHHHHHC----CCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCCEEE
T ss_conf 1686367687899999877----995888526769999999998998489976447772669999999986489888899
Q ss_pred ECCCCCC
Q ss_conf 8689975
Q gi|254780516|r 72 AGFPCQP 78 (83)
Q Consensus 72 gG~PCq~ 78 (83)
.-||+-.
T Consensus 291 lDPP~f~ 297 (385)
T 2b78_A 291 IDPPSFA 297 (385)
T ss_dssp ECCCCC-
T ss_pred ECCCCCC
T ss_conf 8986335
No 22
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=97.83 E-value=2.8e-05 Score=45.87 Aligned_cols=71 Identities=14% Similarity=0.229 Sum_probs=49.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEE---ECCCCCCCEEEEECCCCCCC
Q ss_conf 696410794788999987222089569999806955511222001233232115897---53657887199986899754
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI---KTQDIPDHDVLLAGFPCQPF 79 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~---~~~~~~~~D~l~gG~PCq~f 79 (83)
+++|||||+|.|++.|... +..|.++|.++.|.+..+.|-...... ..... ....++.+|+++--||=.+-
T Consensus 293 ~vlDLycG~G~fsl~LA~~-----~~~V~gvE~~~~av~~A~~na~~n~~~-~~~~~~~~~~~~~~~~D~vvlDPPR~G~ 366 (425)
T 2jjq_A 293 KILDMYSGVGTFGIYLAKR-----GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIVDPPRAGL 366 (425)
T ss_dssp EEEEETCTTTHHHHHHHHT-----TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEECCCTTCS
T ss_pred EEEECCCCCCHHHHHHHHC-----CCEEEEEECCHHHHHHHHHHHHHCCCC-EEEEEHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 7876267866888998742-----855457504688899999989877970-7986401134430699999999987362
No 23
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus HB8} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.80 E-value=5.2e-05 Score=44.46 Aligned_cols=73 Identities=12% Similarity=0.143 Sum_probs=51.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC------CCCEEEEEEC---CCCCCCEEEEEC
Q ss_conf 6964107947889999872220895699998069555112220012332------3211589753---657887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL------IFGDIAKIKT---QDIPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~------~~~DI~~~~~---~~~~~~D~l~gG 73 (83)
||+|+|||.||+++.+... ...|.++|+++.+.+..+.|....- +.+|+.++-. +.-..+|+++.-
T Consensus 212 ~VLDl~~g~G~~s~~~a~~-----~~~V~~vD~s~~al~~a~~n~~~ng~~~~~~~~~D~~~~l~~~~~~~~~fD~VilD 286 (382)
T 1wxx_A 212 RALDVFSYAGGFALHLALG-----FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp EEEEETCTTTHHHHHHHHH-----EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEECCCCCCHHHHHHHHC-----CCCEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEC
T ss_conf 0410467787799999846-----77267204639999999999997286886678601777777778626799869982
Q ss_pred CCCCCCC
Q ss_conf 8997543
Q gi|254780516|r 74 FPCQPFS 80 (83)
Q Consensus 74 ~PCq~fS 80 (83)
|||-.-+
T Consensus 287 pP~~~~~ 293 (382)
T 1wxx_A 287 PPAFAKG 293 (382)
T ss_dssp CCCSCCS
T ss_pred CCCCCCC
T ss_conf 7211589
No 24
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.65 E-value=3.7e-05 Score=45.25 Aligned_cols=71 Identities=15% Similarity=-0.027 Sum_probs=50.3
Q ss_pred EEEEECCCCCH-HHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC------CCCCCEEEEEECCCC-CCCEEEEECC
Q ss_conf 69641079478-899998722208956999980695551122200123------323211589753657-8871999868
Q gi|254780516|r 3 KITDLFCGIGG-IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------TLIFGDIAKIKTQDI-PDHDVLLAGF 74 (83)
Q Consensus 3 ~v~~LFsG~GG-~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~------~~~~~DI~~~~~~~~-~~~D~l~gG~ 74 (83)
||+|+|||.|+ +.+++.. +-..|.++|+++.+.+..+.|... ..+.+|+++.-.+.+ ..+|+++.-|
T Consensus 175 ~vldlg~g~g~~l~~~l~~-----~~~~V~~vDi~~~~l~~a~~~a~~~g~~~i~~~~~d~~~~~~~~~~~~fD~v~~dp 249 (373)
T 2qm3_A 175 DIFVLGDDDLTSIALMLSG-----LPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp EEEEESCTTCHHHHHHHHT-----CCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred EEEEEECCCHHHHHHHHHC-----CCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCEEEECC
T ss_conf 7999979924999999976-----99989999797999999999999819974399853086632454078889899899
Q ss_pred CCCC
Q ss_conf 9975
Q gi|254780516|r 75 PCQP 78 (83)
Q Consensus 75 PCq~ 78 (83)
|+..
T Consensus 250 p~~~ 253 (373)
T 2qm3_A 250 PETL 253 (373)
T ss_dssp CSSH
T ss_pred CCCC
T ss_conf 9864
No 25
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.64 E-value=3.1e-05 Score=45.59 Aligned_cols=73 Identities=19% Similarity=0.320 Sum_probs=49.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-----C-CCCCEEEEEE-----C----------
Q ss_conf 69641079478899998722208956999980695551122200123-----3-2321158975-----3----------
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----T-LIFGDIAKIK-----T---------- 61 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-----~-~~~~DI~~~~-----~---------- 61 (83)
+++|||||+|.+++.|... ++.|.++|+++.|.+.-+.|... . .+.+|..++. .
T Consensus 216 ~vlDLycG~Gt~sl~La~~-----~~~V~gvE~~~~av~~A~~Na~~n~i~N~~f~~~~a~~~~~~~~~~~~~~~~~~~~ 290 (369)
T 3bt7_A 216 DLLELYCGNGNFSLALARN-----FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGID 290 (369)
T ss_dssp EEEEESCTTSHHHHHHGGG-----SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSC
T ss_pred EEEECCCCCCHHHHHHHHC-----CCEEEEEEECHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 4887378965889998730-----85788999702678999999997598871899725999998876314566530231
Q ss_pred CCCCCCEEEEECCCCCCCC
Q ss_conf 6578871999868997543
Q gi|254780516|r 62 QDIPDHDVLLAGFPCQPFS 80 (83)
Q Consensus 62 ~~~~~~D~l~gG~PCq~fS 80 (83)
....+.|+++--||=.+..
T Consensus 291 ~~~~~~d~vilDPPR~Gl~ 309 (369)
T 3bt7_A 291 LKSYQCETIFVDPPRSGLD 309 (369)
T ss_dssp GGGCCEEEEEECCCTTCCC
T ss_pred HHCCCCCEEEECCCCCCCH
T ss_conf 0126587799897962518
No 26
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI- 2, protein structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.61 E-value=0.00015 Score=42.17 Aligned_cols=70 Identities=20% Similarity=0.156 Sum_probs=50.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC--------CCCCCEEEEEECC---CCCCCEEE
Q ss_conf 269641079478899998722208956999980695551122200123--------3232115897536---57887199
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--------TLIFGDIAKIKTQ---DIPDHDVL 70 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~--------~~~~~DI~~~~~~---~~~~~D~l 70 (83)
.||+|||||.|++++.+-.+ +.+ |.++|.++.+.+.-+.|..- ..+.+|+.++-.+ .-..+|+|
T Consensus 155 ~rVLdlF~ytG~~sl~aa~~----GA~-V~~VD~s~~al~~a~~N~~lNg~~~~~~~~i~~Da~~~l~~~~~~g~~fD~I 229 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAA----GAE-VTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHT----TCE-EEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CEEEECCCCCCHHHHHHHHC----CCE-EEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCEE
T ss_conf 75887267777789999978----984-9999387999999999999848988858999267999999999718997689
Q ss_pred EECCCC
Q ss_conf 986899
Q gi|254780516|r 71 LAGFPC 76 (83)
Q Consensus 71 ~gG~PC 76 (83)
+.-||.
T Consensus 230 ilDPP~ 235 (332)
T 2igt_A 230 LTDPPK 235 (332)
T ss_dssp EECCCS
T ss_pred EECCCC
T ss_conf 978964
No 27
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.56 E-value=0.0002 Score=41.52 Aligned_cols=75 Identities=13% Similarity=0.135 Sum_probs=52.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC--------CCCCEEEEEECC---CCCCCEEE
Q ss_conf 2696410794788999987222089569999806955511222001233--------232115897536---57887199
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--------LIFGDIAKIKTQ---DIPDHDVL 70 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~--------~~~~DI~~~~~~---~~~~~D~l 70 (83)
-||+|+|||.||+++..-.. |.+.|.++|+++.|.+..+.|+.-. .+.+|+.++-.. .-..+|++
T Consensus 222 ~rVLdlf~~tG~~si~Aa~~----GA~~V~~vD~s~~al~~a~~N~~~Ngl~~~~~~~i~~d~~~~l~~~~~~~~~fD~I 297 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMG----GCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHT----TCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CEEEECCCCCCHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCCEE
T ss_conf 86875388668899999977----99759999898999999999999829984345789422999999998753599989
Q ss_pred EECCCCCCCC
Q ss_conf 9868997543
Q gi|254780516|r 71 LAGFPCQPFS 80 (83)
Q Consensus 71 ~gG~PCq~fS 80 (83)
+.-||.-.-|
T Consensus 298 ilDPP~f~~~ 307 (396)
T 3c0k_A 298 VMDPPKFVEN 307 (396)
T ss_dssp EECCSSTTTC
T ss_pred EECCCCCCCC
T ss_conf 9878322456
No 28
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=97.41 E-value=9.9e-05 Score=43.07 Aligned_cols=71 Identities=23% Similarity=0.280 Sum_probs=49.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-----C-CCCCEEEEEECC---CCCCCEEEEEC
Q ss_conf 69641079478899998722208956999980695551122200123-----3-232115897536---57887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----T-LIFGDIAKIKTQ---DIPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-----~-~~~~DI~~~~~~---~~~~~D~l~gG 73 (83)
+++|||||+|.+++.|.. ..+.|.++|+++.|.+.-+.|... . .+.+|+.+.-.+ .....|+++--
T Consensus 289 ~vlDLYcG~G~fsl~La~-----~~~~V~gvE~~~~Av~~A~~na~~n~~~n~~f~~~~~~~~~~~~~~~~~~~d~vilD 363 (433)
T 1uwv_A 289 RVLDLFCGMGNFTLPLAT-----QAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp EEEEESCTTTTTHHHHHT-----TSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred EEEEECCCCCHHHHHHHH-----HCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEC
T ss_conf 799956885177787665-----056245663549999999999998499756999147566644306652799989989
Q ss_pred CCCCC
Q ss_conf 89975
Q gi|254780516|r 74 FPCQP 78 (83)
Q Consensus 74 ~PCq~ 78 (83)
||=.+
T Consensus 364 PPR~G 368 (433)
T 1uwv_A 364 PARAG 368 (433)
T ss_dssp CCTTC
T ss_pred CCCCC
T ss_conf 99807
No 29
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175, PSI-2; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.37 E-value=0.00017 Score=41.96 Aligned_cols=73 Identities=11% Similarity=0.122 Sum_probs=50.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC----------CCCCCEEEEEECCC----C--CC
Q ss_conf 69641079478899998722208956999980695551122200123----------32321158975365----7--88
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----------TLIFGDIAKIKTQD----I--PD 66 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~----------~~~~~DI~~~~~~~----~--~~ 66 (83)
|++|+.||.|...+.+.... .-..|.++|+++.+.+..+.|... ..+++||+...... + ..
T Consensus 39 rVLDlG~G~G~i~l~La~r~---~~~~v~gvEi~~~~~~lAr~N~~ln~~~~~~~ri~~~~~Di~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 39 RIADLGAGAGAAGMAVAARL---EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp EEEECCSSSSHHHHHHHHHC---TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred EEEECCHHHHHHHHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHCCCHHHHHHHHCCCC
T ss_conf 99995436769999999858---998899998999999999999998654433235358963321322123443313676
Q ss_pred CEEEEECCCCCC
Q ss_conf 719998689975
Q gi|254780516|r 67 HDVLLAGFPCQP 78 (83)
Q Consensus 67 ~D~l~gG~PCq~ 78 (83)
+|++++-||.-+
T Consensus 116 fD~VvsNPPY~~ 127 (260)
T 2ozv_A 116 FHHVIMNPPYND 127 (260)
T ss_dssp EEEEEECCCC--
T ss_pred CCEEEECCCCCC
T ss_conf 267986698446
No 30
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research center for structural genomics, protein structure initiative, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.35 E-value=0.00051 Score=39.50 Aligned_cols=72 Identities=13% Similarity=0.098 Sum_probs=49.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCC---C--CCCEEEEECCCCC
Q ss_conf 6964107947889999872220895699998069555112220012332321158975365---7--8871999868997
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD---I--PDHDVLLAGFPCQ 77 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~---~--~~~D~l~gG~PCq 77 (83)
+++|++||.|++...+..... +.+ |.++|+++.+.+.-+.|.........+...+... + ..+|+++.-||--
T Consensus 58 ~vLDig~G~G~~~~~~a~~~~--~~~-v~~vDi~~~~~~~a~~n~~~~~~~~~i~~~~~~~~~~~~~~~fD~Iv~NPPy~ 134 (230)
T 3evz_A 58 VALEIGTGHTAMMALMAEKFF--NCK-VTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYY 134 (230)
T ss_dssp EEEEECCTTTCHHHHHHHHHH--CCE-EEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC
T ss_pred EEEEEECCHHHHHHHHHHHCC--CCE-EEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCCEEEECCCCC
T ss_conf 899940744399999999779--987-99998863112467766886066517998521101213576524899899955
No 31
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.35 E-value=0.00065 Score=38.96 Aligned_cols=75 Identities=20% Similarity=0.211 Sum_probs=52.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCC---C--CCCEEEEECCCC
Q ss_conf 26964107947889999872220895699998069555112220012332321158975365---7--887199986899
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD---I--PDHDVLLAGFPC 76 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~---~--~~~D~l~gG~PC 76 (83)
.|++|+++|-|...+.+..... + -.+.++|+++.|.++-+.|...... .+|+=+...- + .++|+|+.-||.
T Consensus 111 ~~ilDlgtGsG~I~i~la~~~p--~-~~v~a~Dis~~Al~~A~~Na~~~~~-~~v~~~~~D~~~~~~~~~fDlIvsNPPY 186 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERP--D-CEIIAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPY 186 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCT--T-SEEEEECSSHHHHHHHHHHHHHHTC-CSEEEECCSTTGGGTTCCEEEEEECCCC
T ss_pred CEEEEECCCCHHHHHHHHHHCC--C-CEEEEECCCHHHHHHHHHHHHHCCC-CCEEEEECCCCCCCCCCCEEEEEECCCC
T ss_conf 6176414653299999998689--8-7588641766889999999997499-8779997576433678841578856986
Q ss_pred CCCC
Q ss_conf 7543
Q gi|254780516|r 77 QPFS 80 (83)
Q Consensus 77 q~fS 80 (83)
-+-+
T Consensus 187 i~~~ 190 (276)
T 2b3t_A 187 IDEQ 190 (276)
T ss_dssp BCTT
T ss_pred CCHH
T ss_conf 7713
No 32
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.25 E-value=0.00023 Score=41.26 Aligned_cols=73 Identities=23% Similarity=0.177 Sum_probs=51.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-------CCCCCEEEEEECCC-CCCCEEEEEC
Q ss_conf 269641079478899998722208956999980695551122200123-------32321158975365-7887199986
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDIAKIKTQD-IPDHDVLLAG 73 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-------~~~~~DI~~~~~~~-~~~~D~l~gG 73 (83)
-||+|+.||.|.+.+.+.+. .+. .|.++|+++.+.+.-+.|... ..+.+|+.++.... -..+|+++.-
T Consensus 51 ~~vLDlG~G~G~~~l~la~~---~~~-~v~~vDi~~~~~~~A~~N~~~n~l~~~v~~~~~D~~~~~~~~~~~~fD~Iv~N 126 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLSTR---TKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCN 126 (259)
T ss_dssp CEEEETTCTTTHHHHHHHTT---CCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEEC
T ss_pred CEEEEEECCCCHHHHHHHHC---CCC-EEEEEECCHHHHHHHHHHHHHCCCCHHHEEEEHHHHHHHHCCCCCCCCEEEEC
T ss_conf 97999725858999999867---898-89999998999999999998607330112330011100010355425478857
Q ss_pred CCCCC
Q ss_conf 89975
Q gi|254780516|r 74 FPCQP 78 (83)
Q Consensus 74 ~PCq~ 78 (83)
||.-+
T Consensus 127 PPy~~ 131 (259)
T 3lpm_A 127 PPYFA 131 (259)
T ss_dssp CCC--
T ss_pred CCCCC
T ss_conf 88536
No 33
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, NYSGXRC, structural genomics; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.15 E-value=0.0013 Score=37.45 Aligned_cols=69 Identities=20% Similarity=0.240 Sum_probs=47.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCC----CCCEEEEECCC
Q ss_conf 269641079478899998722208956999980695551122200123323211589753657----88719998689
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI----PDHDVLLAGFP 75 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~----~~~D~l~gG~P 75 (83)
.+|+|+.||.|.+...+.+. +...|.++|+++.|.+.-+.|..... ..++.......+ .++|++++-.+
T Consensus 62 ~~VLDlGcGsG~~~~~~ak~----g~~~V~~iDis~~al~~A~~N~~~n~-~~~~~~~~~~~~~~~~~~fD~Ivani~ 134 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKL----GAKSVLATDISDESMTAAEENAALNG-IYDIALQKTSLLADVDGKFDLIVANIL 134 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHT----TCSEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEESSTTTTCCSCEEEEEEESC
T ss_pred CEEEEEECCHHHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHHHCC-CCCEEEEECCHHHCCCCCCCEEEECCC
T ss_conf 99999952622999999875----99689999898999999999999737-667688734344404555689998587
No 34
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.06 E-value=0.00053 Score=39.41 Aligned_cols=74 Identities=14% Similarity=0.250 Sum_probs=51.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-------CCEEEEEECCCCCCCEEEEECC
Q ss_conf 269641079478899998722208956999980695551122200123323-------2115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-------FGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-------~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
.+++|+++|-|...+.+... .+. .|.++|+++.|.++-+.|...... .+|..+.......++|+|+.-|
T Consensus 125 ~~vlDlgtGSG~I~isla~~---p~~-~V~avDiS~~Al~vA~~Na~~~~~~~~~~~~~~d~~~~~~~~~~~fDlIVSNP 200 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKF---SDA-IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNP 200 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHH---SSC-EEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECC
T ss_pred CEEEEEECCHHHHHHHHHHH---HCC-CEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECC
T ss_conf 67998604605988767652---014-51676397999999999998448986299996321001411267530899678
Q ss_pred CCCCC
Q ss_conf 99754
Q gi|254780516|r 75 PCQPF 79 (83)
Q Consensus 75 PCq~f 79 (83)
|--+-
T Consensus 201 PYI~~ 205 (284)
T 1nv8_A 201 PYVKS 205 (284)
T ss_dssp CCBCG
T ss_pred CCCCC
T ss_conf 88886
No 35
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.03 E-value=0.00067 Score=38.91 Aligned_cols=77 Identities=9% Similarity=0.134 Sum_probs=52.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC------CCCEEEEEECC--CCCCCEEEEEC
Q ss_conf 26964107947889999872220895699998069555112220012332------32115897536--57887199986
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL------IFGDIAKIKTQ--DIPDHDVLLAG 73 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~------~~~DI~~~~~~--~~~~~D~l~gG 73 (83)
.+|+|+|||.||-++.+..+..+. -.+.++|+++...+.++.|....- ...|..++... .+.++|.++.-
T Consensus 104 ~~VLD~CAapGgKt~~la~l~~~~--~~i~a~D~~~~Rl~~l~~~~~r~g~~~v~~~~~d~~~~~~~~~~~~~fd~IlvD 181 (309)
T 2b9e_A 104 SHVIDACAAPGNKTSHLAALLKNQ--GKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLD 181 (309)
T ss_dssp CEEEESSCTTCHHHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEEC
T ss_pred CEEEEECCCCCHHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCCCEEEEEEC
T ss_conf 949996789657999999872589--669998087888999987677508734999704244444334445511399932
Q ss_pred CCCCCCC
Q ss_conf 8997543
Q gi|254780516|r 74 FPCQPFS 80 (83)
Q Consensus 74 ~PCq~fS 80 (83)
+||.+-.
T Consensus 182 aPCSg~G 188 (309)
T 2b9e_A 182 PSCSGSG 188 (309)
T ss_dssp CCCCC--
T ss_pred CCCCCCC
T ss_conf 8978887
No 36
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=96.84 E-value=0.0032 Score=35.47 Aligned_cols=70 Identities=23% Similarity=0.347 Sum_probs=46.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-CCEEEEEEC---CCC--CCCEEEEECCCC
Q ss_conf 69641079478899998722208956999980695551122200123323-211589753---657--887199986899
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKT---QDI--PDHDVLLAGFPC 76 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-~~DI~~~~~---~~~--~~~D~l~gG~PC 76 (83)
+++|+.||.|.+.+.+.+. ...+.++|+++.+.+.-+.|...... ...|+-+.. +.+ ..+|+++..+|.
T Consensus 55 ~vLDiGcG~G~~~~~la~~-----~~~v~~iDis~~~i~~a~~n~~~~~l~~~~i~~~~~D~~~~~~~~~fD~Ii~~~~~ 129 (194)
T 1dus_A 55 DILDLGCGYGVIGIALADE-----VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNPPI 129 (194)
T ss_dssp EEEEETCTTSHHHHHHGGG-----SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSCEEEEEECCCS
T ss_pred EEEEECCCCCHHHHHHHHH-----CCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCCCEEEECCCH
T ss_conf 4999569642999999973-----88479982636788999999998199986199998736763356774399999522
Q ss_pred C
Q ss_conf 7
Q gi|254780516|r 77 Q 77 (83)
Q Consensus 77 q 77 (83)
.
T Consensus 130 ~ 130 (194)
T 1dus_A 130 R 130 (194)
T ss_dssp T
T ss_pred H
T ss_conf 1
No 37
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein structure initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=96.84 E-value=0.0023 Score=36.26 Aligned_cols=70 Identities=19% Similarity=0.139 Sum_probs=48.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC--------CCCCEEEEEECC-CCCCCEEEEEC
Q ss_conf 696410794788999987222089569999806955511222001233--------232115897536-57887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--------LIFGDIAKIKTQ-DIPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~--------~~~~DI~~~~~~-~~~~~D~l~gG 73 (83)
+++||+||+|+..++|.+. +..|.++|+|+..++..++|++.. .+.+|..++-.. .-..+|+++.-
T Consensus 96 ~v~Dl~cG~G~da~alA~~-----~~~V~~vE~d~~~~~~A~~N~~~~~~~~~~v~~~~~D~~~~l~~~~~~~~d~v~~D 170 (410)
T 3ll7_A 96 KVVDLTGGLGIDFIALMSK-----ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp EEEESSCSSSHHHHHHHTT-----CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred EEEECCCCHHHHHHHHHHC-----CCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCCEEEEC
T ss_conf 8998788667999999963-----99899995899999999984898726788269996668888753467778889976
Q ss_pred CCCC
Q ss_conf 8997
Q gi|254780516|r 74 FPCQ 77 (83)
Q Consensus 74 ~PCq 77 (83)
||-.
T Consensus 171 PaRR 174 (410)
T 3ll7_A 171 PARR 174 (410)
T ss_dssp CEEC
T ss_pred CCCC
T ss_conf 6233
No 38
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransferase domain; 2.90A {Escherichia coli}
Probab=96.83 E-value=0.00077 Score=38.60 Aligned_cols=75 Identities=17% Similarity=0.271 Sum_probs=52.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-CCEEEEEECCCC-----CCCEEEEECCCC
Q ss_conf 69641079478899998722208956999980695551122200123323-211589753657-----887199986899
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDI-----PDHDVLLAGFPC 76 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-~~DI~~~~~~~~-----~~~D~l~gG~PC 76 (83)
+|+|+||+.||=+..+.....+. -.+.|+|+++...+.++.|....-. .-.++..+...+ ..+|.|+--.||
T Consensus 120 ~VLDlCAAPGgKT~~la~~~~~~--g~lvAnD~~~~R~~~L~~nl~r~g~~nv~~~~~d~~~~~~~~~~~fD~ILvDaPC 197 (479)
T 2frx_A 120 RVMDVAAAPGSKTTQISARMNNE--GAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPC 197 (479)
T ss_dssp EEEESSCTTSHHHHHHHHHTTTC--SEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCC
T ss_pred EEEEECCCCCHHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCCCCCCCEEEECCCC
T ss_conf 69994788658999999862468--2599653657778899998986389718999354001140131016789965985
Q ss_pred CCC
Q ss_conf 754
Q gi|254780516|r 77 QPF 79 (83)
Q Consensus 77 q~f 79 (83)
.+-
T Consensus 198 SG~ 200 (479)
T 2frx_A 198 SGE 200 (479)
T ss_dssp CCG
T ss_pred CCC
T ss_conf 678
No 39
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransferase posttranslational modification; 1.59A {Thermus thermophilus HB8} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=96.67 E-value=0.0027 Score=35.83 Aligned_cols=65 Identities=22% Similarity=0.267 Sum_probs=44.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-----CCEEEEEECCCCCCCEEEEEC
Q ss_conf 269641079478899998722208956999980695551122200123323-----211589753657887199986
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-----FGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-----~~DI~~~~~~~~~~~D~l~gG 73 (83)
.+|+|+.||-|-++.++.+. +.+ |.++|+|+.|.+.-+.|...... .+|+.+. ....++|++++.
T Consensus 122 ~~VLDvGcGsGiLsi~aak~----G~~-V~aiDid~~av~~a~~N~~~N~v~~~~~~~~~~~~--~~~~~fDlIvaN 191 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKL----GGK-ALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA--LPFGPFDLLVAN 191 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHT----TCE-EEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH--GGGCCEEEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHC----CCE-EEEEECCHHHHHHHHHHHHHHCCCEEEEECCHHHC--CCCCCCCEEEEE
T ss_conf 98999717778889999845----998-99998872788999998997099449998743451--645786689998
No 40
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus HB8} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=96.61 E-value=0.0023 Score=36.25 Aligned_cols=76 Identities=14% Similarity=0.185 Sum_probs=53.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCC-----CCCEEEEECCCC
Q ss_conf 269641079478899998722208956999980695551122200123323211589753657-----887199986899
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI-----PDHDVLLAGFPC 76 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~-----~~~D~l~gG~PC 76 (83)
.+|+|+||+.||=+..+.....+. -.+.++|+++...++++.|....-...-|+..+...+ ..+|.|+.-.||
T Consensus 103 ~~VLDlCAAPGGKt~~la~~l~~~--g~l~and~~~~R~~~l~~nl~r~g~~~~v~~~d~~~l~~~~~~~fD~ILvDaPC 180 (464)
T 3m6w_A 103 ERVLDLAAAPGGKTTHLAARMGGK--GLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPC 180 (464)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTC--SEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCC
T ss_pred CEEEEECCCCCCHHHHHHHHHHCC--CEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCEEEECCCC
T ss_conf 979883658765599999885358--357622431788888988888618861687232243320466644379844876
Q ss_pred CCC
Q ss_conf 754
Q gi|254780516|r 77 QPF 79 (83)
Q Consensus 77 q~f 79 (83)
-+-
T Consensus 181 SG~ 183 (464)
T 3m6w_A 181 SGE 183 (464)
T ss_dssp CCG
T ss_pred CCC
T ss_conf 667
No 41
>3dmg_A Probable ribosomal RNA small subunit methyltransferase; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=96.50 E-value=0.0057 Score=34.25 Aligned_cols=69 Identities=19% Similarity=0.281 Sum_probs=46.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCC----CCCEEEEECCCC
Q ss_conf 69641079478899998722208956999980695551122200123323211589753657----887199986899
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI----PDHDVLLAGFPC 76 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~----~~~D~l~gG~PC 76 (83)
||+|+.||.|.+...+.+. +.+ +.++|+++.+.+.-+.|.........+...+.... ..+|+|+..+|=
T Consensus 236 ~VLDlGcG~G~~~~~la~~----~~~-v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~n~~~ 308 (381)
T 3dmg_A 236 QVLDLGAGYGALTLPLARM----GAE-VVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPF 308 (381)
T ss_dssp EEEEETCTTSTTHHHHHHT----TCE-EEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCC
T ss_pred EEEEEEEECCHHHHHHHHC----CCE-EECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEECCCH
T ss_conf 8999960104888976751----988-741469999999999999982997388530100144667986899989324
No 42
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferase; tRNA modification enzyme, guanine 26, N(2),N(2)- dimethyltransferase; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=96.34 E-value=0.0036 Score=35.21 Aligned_cols=44 Identities=11% Similarity=0.070 Sum_probs=34.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC
Q ss_conf 26964107947889999872220895699998069555112220012
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP 48 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~ 48 (83)
.+++|.|||.|... ++.+ .+.+.+.|+++|+++.|.+..+.|..
T Consensus 49 ~~iLD~~sasG~r~--iRya-~E~~~~~V~~nDi~~~A~~~i~~N~~ 92 (378)
T 2dul_A 49 KIVLDALSATGIRG--IRFA-LETPAEEVWLNDISEDAYELMKRNVM 92 (378)
T ss_dssp SEEEESSCTTSHHH--HHHH-HHSSCSEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEECCCCCHHHH--HHHH-HHCCCCEEEEEECCHHHHHHHHHHHH
T ss_conf 98999788722999--9999-85899889999699899999999999
No 43
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus}
Probab=96.34 E-value=0.0021 Score=36.44 Aligned_cols=42 Identities=10% Similarity=0.131 Sum_probs=34.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC
Q ss_conf 69641079478899998722208956999980695551122200123
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~ 49 (83)
+|+|+.||.|++++-|.+. . ..|+++|+++.+.+..+.|...
T Consensus 25 ~VLD~gcG~G~~t~~LA~~----~-~~V~aiDis~~al~~a~~n~~~ 66 (185)
T 3mti_A 25 IVVDATMGNGNDTAFLAGL----S-KKVYAFDVQEQALGKTSQRLSD 66 (185)
T ss_dssp EEEESCCTTSHHHHHHHTT----S-SEEEEEESCHHHHHHHHHHHHH
T ss_pred EEEEEEEECCHHHHHHHHC----C-CEEEECCCCHHHHHHHHHHHHH
T ss_conf 9999963888999999826----9-9899758987888789999998
No 44
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.25 E-value=0.002 Score=36.51 Aligned_cols=75 Identities=19% Similarity=0.238 Sum_probs=51.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-CCEEEEEECCC-----CCCCEEEEECCCC
Q ss_conf 69641079478899998722208956999980695551122200123323-21158975365-----7887199986899
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQD-----IPDHDVLLAGFPC 76 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-~~DI~~~~~~~-----~~~~D~l~gG~PC 76 (83)
+|+|+||+.||=+..+.....+. -.+.++|+++...+.++.|....-. .--++..+... -..+|.++--.||
T Consensus 108 ~VLDlCAAPGgKt~~la~~l~~~--g~l~a~d~~~~R~~~l~~nl~r~g~~n~~v~~~d~~~~~~~~~~~fD~VLvDaPC 185 (456)
T 3m4x_A 108 KVLDLCAAPGGKSTQLAAQMKGK--GLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPC 185 (456)
T ss_dssp EEEESSCTTCHHHHHHHHHHTTC--SEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCC
T ss_pred EEEEECCCCCHHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCC
T ss_conf 89881678647999999970089--7588630646777899876875278748999325443552124655579974876
Q ss_pred CCC
Q ss_conf 754
Q gi|254780516|r 77 QPF 79 (83)
Q Consensus 77 q~f 79 (83)
.+-
T Consensus 186 SG~ 188 (456)
T 3m4x_A 186 SGE 188 (456)
T ss_dssp CCG
T ss_pred CCC
T ss_conf 778
No 45
>2f8l_A Hypothetical protein LMO1582; 16411011, structural genomics, PSI, protein structure initiative, joint center for structural genomics; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.22 E-value=0.016 Score=32.06 Aligned_cols=75 Identities=13% Similarity=0.149 Sum_probs=47.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCC--CEEEEEEECCHHHHHHHHHCCCC-----CCCCCEEEEEECCCCCCCEEEEECC
Q ss_conf 2696410794788999987222089--56999980695551122200123-----3232115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPN-----TLIFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~--~~~v~a~e~d~~a~~~y~~n~~~-----~~~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
.+|+|.+||.|++-.++-+...... -..++.+|+++.+.+.-+.|..- ....+|.. .......+|++++=|
T Consensus 132 ~~vlDp~cGsG~~l~~~~~~l~~~~~~~~~~~g~di~~~~~~~a~~n~~~~~~~~~~~~~d~~--~~~~~~~fD~iv~NP 209 (344)
T 2f8l_A 132 VSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGL--ANLLVDPVDVVISDL 209 (344)
T ss_dssp EEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTT--SCCCCCCEEEEEEEC
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCCCCHHHHHCCCCC--CCCCCCCCCCCCCCC
T ss_conf 889954899668999999998753677618999989999999999640002221233100110--013467767211579
Q ss_pred CCCC
Q ss_conf 9975
Q gi|254780516|r 75 PCQP 78 (83)
Q Consensus 75 PCq~ 78 (83)
|...
T Consensus 210 P~~~ 213 (344)
T 2f8l_A 210 PVGY 213 (344)
T ss_dssp CCSE
T ss_pred CCCC
T ss_conf 9667
No 46
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics, protein structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=96.21 E-value=0.0033 Score=35.45 Aligned_cols=71 Identities=11% Similarity=0.090 Sum_probs=44.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-------CCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 6964107947889999872220895699998069555112220012332-------321158975365788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-------~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
+|+|+.||.|++.+.+.+.... -..|.++|+++.+.+.-+.|..... +.+|+.++..-.-...|.....++
T Consensus 25 ~VLDlGcG~G~~t~~la~~~~~--~~~V~giDis~~~l~~ar~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 102 (197)
T 3eey_A 25 TVVDATCGNGNDTAFLASLVGE--NGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLG 102 (197)
T ss_dssp EEEESCCTTSHHHHHHHHHHCT--TCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEES
T ss_pred EEEEEEEECCHHHHHHHHHHCC--CEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCCCCEEEEEEE
T ss_conf 9999920488999999998389--81999997388998999999998399877899985867601215776430465255
No 47
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=96.14 E-value=0.021 Score=31.38 Aligned_cols=73 Identities=16% Similarity=0.074 Sum_probs=50.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECC---C---------CCCCEE
Q ss_conf 2696410794788999987222089569999806955511222001233232115897536---5---------788719
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ---D---------IPDHDV 69 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~---~---------~~~~D~ 69 (83)
.|++|+.+|.|.....|.... .+++ +.++|+++.|.+.-+.|.........|.-+... . -..+|+
T Consensus 67 ~~~lDiGtGsg~I~~~L~~~~--~~~~-~~~~Di~~~al~~A~~N~~~n~l~~~i~~~~~~~~~~i~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 67 RRGIDIGTGASCIYPLLGATL--NGWY-FLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CEEEEESCTTTTHHHHHHHHH--HCCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CEEEEECCCHHHHHHHHHHHC--CCCE-EEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCEEE
T ss_conf 548995678789999999977--9975-9999899999999999999838765224565232776766666643676549
Q ss_pred EEECCCCC
Q ss_conf 99868997
Q gi|254780516|r 70 LLAGFPCQ 77 (83)
Q Consensus 70 l~gG~PCq 77 (83)
++.=||=-
T Consensus 144 iv~NPPY~ 151 (254)
T 2h00_A 144 CMCNPPFF 151 (254)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
T ss_conf 99368555
No 48
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=95.90 E-value=0.026 Score=30.91 Aligned_cols=66 Identities=30% Similarity=0.527 Sum_probs=44.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC-------CCCCEEEEEECCCCCCCEEEEECC
Q ss_conf 696410794788999987222089569999806955511222001233-------232115897536578871999868
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~-------~~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
+|+|+.||.|++++.+.+. ...|.++|+++.+.+..+.|.... .+.+|..+... ...++|+++.+.
T Consensus 36 ~VLDiGcG~G~~s~~la~~-----~~~V~avD~~~~~~~~a~~~~~~~gl~~~v~~~~gd~~~~~~-~~~~~D~v~~~~ 108 (192)
T 1l3i_A 36 VAVDVGCGTGGVTLELAGR-----VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALC-KIPDIDIAVVGG 108 (192)
T ss_dssp EEEEESCTTSHHHHHHHTT-----SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHT-TSCCEEEEEESC
T ss_pred EEEEEECCHHHHHHHHHHC-----CCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCHHHCCC-CCCCCCEEEEEC
T ss_conf 9999838704999999843-----999999990628899999999980999888999886210530-008868899918
No 49
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=95.85 E-value=0.027 Score=30.86 Aligned_cols=75 Identities=15% Similarity=0.172 Sum_probs=50.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCC------CCCCEEEEECCCC
Q ss_conf 6964107947889999872220895699998069555112220012332321158975365------7887199986899
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD------IPDHDVLLAGFPC 76 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~------~~~~D~l~gG~PC 76 (83)
+|+|+|||.||=+..+-... .-..+.++|+++...+.++.|....-....+....... -..+|.+.--.||
T Consensus 249 ~VLD~CAaPGgKt~~la~~~---~~~~i~a~d~~~~r~~~l~~~~~r~g~~~~~~~~~~~~~~~~~~~~~fD~VLlDaPC 325 (429)
T 1sqg_A 249 HILDLCAAPGGKTTHILEVA---PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPC 325 (429)
T ss_dssp EEEEESCTTCHHHHHHHHHC---TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHC---CCCCCEEECCHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCCCCCCEEEEECCC
T ss_conf 14560688048999999862---224656223426778888777864164311102344331010354566459970760
Q ss_pred CCCC
Q ss_conf 7543
Q gi|254780516|r 77 QPFS 80 (83)
Q Consensus 77 q~fS 80 (83)
.+.-
T Consensus 326 Sg~G 329 (429)
T 1sqg_A 326 SATG 329 (429)
T ss_dssp CCGG
T ss_pred CCCC
T ss_conf 4684
No 50
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=95.85 E-value=0.0086 Score=33.34 Aligned_cols=72 Identities=14% Similarity=0.327 Sum_probs=48.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEEC-CCC-CCCEEEEECCCCC
Q ss_conf 69641079478899998722208956999980695551122200123323211589753-657-8871999868997
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT-QDI-PDHDVLLAGFPCQ 77 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~-~~~-~~~D~l~gG~PCq 77 (83)
|++|+.||.|.+...+.+... +. .|.++|+++.|.+.-+.|........++..-+. +.+ ..+|+++.-||.-
T Consensus 199 ~VLDlGcG~G~l~~~la~~~p--~~-~v~~vD~s~~al~~ar~n~~~n~l~~~~~~~d~~~~~~~~fD~Iv~NpPfh 272 (343)
T 2pjd_A 199 KVLDVGCGAGVLSVAFARHSP--KI-RLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFDMIISNPPFH 272 (343)
T ss_dssp BCCBTTCTTSHHHHHHHHHCT--TC-BCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEEEEEECCCCC
T ss_pred EEEEECCCCCHHHHHHHHHCC--CC-EEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCEEEECCCCC
T ss_conf 299932527799999999789--97-899998999999999999998499379996440122665545899887501
No 51
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5- methylpyrimidin-2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=95.71 E-value=0.0099 Score=33.05 Aligned_cols=69 Identities=17% Similarity=0.165 Sum_probs=45.2
Q ss_pred CEEEEECCCCCHHHHHH-HHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCC
Q ss_conf 26964107947889999-872220895699998069555112220012332321158975365788719998689975
Q gi|254780516|r 2 LKITDLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQP 78 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl-~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~PCq~ 78 (83)
.+|+|.+||-|+|-..+ ++.. .-..+..+|+|+.+.+.-+.+ ...++|.... ..-..+|+++|-||=..
T Consensus 41 ~~IlDPacGsG~FL~~~~~~~~---~~~~i~G~did~~~~~la~~~---~i~~~D~l~~--~~~~~fD~VigNPPy~~ 110 (421)
T 2ih2_A 41 GRVLEPACAHGPFLRAFREAHG---TAYRFVGVEIDPKALDLPPWA---EGILADFLLW--EPGEAFDLILGNPPYGI 110 (421)
T ss_dssp CEEEEETCTTCHHHHHHHHHHC---SCSEEEEEESCTTTCCCCTTE---EEEESCGGGC--CCSSCEEEEEECCCCCC
T ss_pred CEEEECCCCHHHHHHHHHHHCC---CCCEEEEEECCHHHHHHHHHH---HHHHCCCCCC--CCCCCCCEEEECCCCCC
T ss_conf 9999687764699999998677---678699997989999999974---2773773336--85457777872576554
No 52
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii OT3}
Probab=95.70 E-value=0.026 Score=30.95 Aligned_cols=77 Identities=14% Similarity=0.203 Sum_probs=51.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-CCEEEEEECCCC------CCCEEEEECC
Q ss_conf 269641079478899998722208956999980695551122200123323-211589753657------8871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDI------PDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-~~DI~~~~~~~~------~~~D~l~gG~ 74 (83)
.+|+|+|||.||=+..+.....+. -.+.++|+++.-.+.++.|....-. .-.+...+.... ..+|.+.--.
T Consensus 261 ~~VLD~CAaPGGKT~~la~~~~~~--~~i~a~d~~~~rl~~l~~~l~r~g~~~v~~~~~d~~~~~~~~~~~~fD~ILvDa 338 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMKNK--GKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDA 338 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTC--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEEC
T ss_pred CEEEEECCCCCHHHHHHHHHHHHC--CCEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCCCEEEECC
T ss_conf 858750688657999999986513--850311254877877899999708763167613301064323556576698518
Q ss_pred CCCCCC
Q ss_conf 997543
Q gi|254780516|r 75 PCQPFS 80 (83)
Q Consensus 75 PCq~fS 80 (83)
||.+--
T Consensus 339 PCSg~G 344 (450)
T 2yxl_A 339 PCTSSG 344 (450)
T ss_dssp CCCCGG
T ss_pred CCCCCC
T ss_conf 888998
No 53
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=95.58 E-value=0.015 Score=32.20 Aligned_cols=64 Identities=14% Similarity=0.270 Sum_probs=48.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-CCCEEEEEECCCCCCCEEEEEC
Q ss_conf 6964107947889999872220895699998069555112220012332-3211589753657887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-~~~DI~~~~~~~~~~~D~l~gG 73 (83)
||||+-||.|.+...|.+.+ .+ |..+|+++...+.-+++.++.. +.+|+.++... .++|+++..
T Consensus 43 ~VLDiGcG~G~~~~~la~~g----~~-v~giD~S~~~l~~a~~~~~~~~~~~~d~~~~~~~--~~fD~v~~~ 107 (239)
T 3bxo_A 43 SLLDVACGTGTHLEHFTKEF----GD-TAGLELSEDMLTHARKRLPDATLHQGDMRDFRLG--RKFSAVVSM 107 (239)
T ss_dssp EEEEETCTTSHHHHHHHHHH----SE-EEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCS--SCEEEEEEC
T ss_pred EEEEEECCCCHHHHHHHHCC----CE-EEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCC--CCCCHHEEE
T ss_conf 89998175849999999739----96-9999696788788863365442232211267733--143210010
No 54
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 1f3l_A*
Probab=95.49 E-value=0.012 Score=32.54 Aligned_cols=67 Identities=18% Similarity=0.350 Sum_probs=41.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHH---HC-CCC--CCCCCEEEEEECCCCCCCEEEEECC
Q ss_conf 696410794788999987222089569999806955511222---00-123--3232115897536578871999868
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ---AN-FPN--TLIFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~---~n-~~~--~~~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
+|+|+-||.|.+++-+.++ |.+.|.++|.++.+...-+ .| ... +.+.+|++++... -.++|+++.-+
T Consensus 67 ~VLDlGcGtG~ls~~aA~~----Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~d~~~l~~~-~~~~D~ivse~ 139 (340)
T 2fyt_A 67 VVLDVGCGTGILSMFAAKA----GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLP-VEKVDVIISEW 139 (340)
T ss_dssp EEEEETCTTSHHHHHHHHT----TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCS-CSCEEEEEECC
T ss_pred EEEEECCCCCHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCC-CCCCCEEEEEC
T ss_conf 8999327747999999975----9988999809899999999999745477516898148876476-46676899963
No 55
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=95.32 E-value=0.014 Score=32.30 Aligned_cols=75 Identities=24% Similarity=0.253 Sum_probs=51.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC------CCCEEEEEECCC---CCCCEEEEEC
Q ss_conf 6964107947889999872220895699998069555112220012332------321158975365---7887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL------IFGDIAKIKTQD---IPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~------~~~DI~~~~~~~---~~~~D~l~gG 73 (83)
+|+|+|||.||=+..+.....+. ..+.++|.++...+.++.|....- ...|.+++.... -..+|.++--
T Consensus 86 ~vLD~CaapGgKt~~i~~~~~~~--~~i~a~d~~~~rl~~l~~~~~r~g~~~~~~~~~d~~~~~~~~~~~~~~fD~ILlD 163 (274)
T 3ajd_A 86 FILDMCAAPGGKTTHLAQLMKNK--GTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLD 163 (274)
T ss_dssp EEEETTCTTCHHHHHHHHHTTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHHHHCC--CCEEEECCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCCCCCEEEEC
T ss_conf 79990788868899999985386--8338732778899999887876511441002243767666531454457679963
Q ss_pred CCCCCC
Q ss_conf 899754
Q gi|254780516|r 74 FPCQPF 79 (83)
Q Consensus 74 ~PCq~f 79 (83)
+||.+-
T Consensus 164 aPCSg~ 169 (274)
T 3ajd_A 164 APCSGN 169 (274)
T ss_dssp ECCC--
T ss_pred CCCCCC
T ss_conf 887666
No 56
>2yxd_A Probable cobalt-precorrin-6Y C(15)- methyltransferase [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii DSM2661}
Probab=95.29 E-value=0.018 Score=31.68 Aligned_cols=42 Identities=14% Similarity=0.430 Sum_probs=34.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC
Q ss_conf 69641079478899998722208956999980695551122200123
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~ 49 (83)
+++|++||.|.+++.+.+. ...|+++|+++.+.+.-+.|...
T Consensus 38 ~VlDlg~G~G~~si~la~~-----~~~V~ave~~~~~i~~a~~n~~~ 79 (183)
T 2yxd_A 38 VVVDVGCGSGGMTVEIAKR-----CKFVYAIDYLDGAIEVTKQNLAK 79 (183)
T ss_dssp EEEEESCCCSHHHHHHHTT-----SSEEEEEECSHHHHHHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHHH-----CCEEEEEECCHHHHHHHHHHHHH
T ss_conf 9999617476999998873-----89999997989999999999997
No 57
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer, dimer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=94.75 E-value=0.028 Score=30.77 Aligned_cols=66 Identities=17% Similarity=0.385 Sum_probs=41.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHH---HHHC-CCC--CCCCCEEEEEECCCCCCCEEEEEC
Q ss_conf 6964107947889999872220895699998069555112---2200-123--323211589753657887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT---YQAN-FPN--TLIFGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~---y~~n-~~~--~~~~~DI~~~~~~~~~~~D~l~gG 73 (83)
+|+|+-||-|.+++.+.++ +.+.|.++|.++.+... .+.| ..+ +.+.+|+.++... -+++|+++.-
T Consensus 41 ~VLDiGcGtG~ls~~aa~~----Ga~~V~a~d~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~~~~~-~~~~D~vvse 112 (328)
T 1g6q_1 41 IVLDVGCGTGILSMFAAKH----GAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLP-FPKVDIIISE 112 (328)
T ss_dssp EEEEETCTTSHHHHHHHHT----CCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCS-SSCEEEEEEC
T ss_pred EEEEECCCCCHHHHHHHHC----CCCEEEEEECHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCC-CCCCCEEEEE
T ss_conf 9999789977999999971----9998999959799999999998738762389997121005577-6664299997
No 58
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=94.67 E-value=0.039 Score=30.07 Aligned_cols=44 Identities=18% Similarity=0.119 Sum_probs=34.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC
Q ss_conf 69641079478899998722208956999980695551122200123
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~ 49 (83)
+++|+.||.|.+.+.+.+.+ +--.|.++|+++.+.+..+.|...
T Consensus 28 ~vLDiGcG~G~~a~~~a~~~---~~~~V~avD~~~~~~~~a~~~~~~ 71 (178)
T 3hm2_A 28 TLWDIGGGSGSIAIEWLRST---PQTTAVCFEISEERRERILSNAIN 71 (178)
T ss_dssp EEEEESTTTTHHHHHHHTTS---SSEEEEEECSCHHHHHHHHHHHHT
T ss_pred EEEEECCCCCHHHHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHH
T ss_conf 99997668888999999968---977698850899999999999998
No 59
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum dsm 1728} SCOP: c.66.1.13
Probab=94.60 E-value=0.15 Score=27.16 Aligned_cols=72 Identities=18% Similarity=0.199 Sum_probs=48.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-------CCEEEEEECCCCCCCEEEEECC
Q ss_conf 269641079478899998722208956999980695551122200123323-------2115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-------FGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-------~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
.||+|+-+|-|.++..|-++.... -.|.++|+++...+.-+.|+..... .+|+.+...+ ..+|.++...
T Consensus 112 ~rVLEiG~GsG~lt~~LA~~v~~~--g~V~~vD~~e~~~~~A~~n~~~~~~~~nV~~~~~Di~e~~~~--~~fD~V~ld~ 187 (275)
T 1yb2_A 112 MDILEVGVGSGNMSSYILYALNGK--GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISD--QMYDAVIADI 187 (275)
T ss_dssp CEEEEECCTTSHHHHHHHHHHTTS--SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCS--CCEEEEEECC
T ss_pred CEEEEECCCCCHHHHHHHHHCCCC--CEEEEEECCHHHHHHHHHHHHHHCCCCCCHHEEHHHHHCCCC--CCCCCEEEEC
T ss_conf 989995771878999999860899--589999088999999998677631567521110112210244--4233058705
Q ss_pred CCC
Q ss_conf 997
Q gi|254780516|r 75 PCQ 77 (83)
Q Consensus 75 PCq 77 (83)
|..
T Consensus 188 p~p 190 (275)
T 1yb2_A 188 PDP 190 (275)
T ss_dssp SCG
T ss_pred CCH
T ss_conf 689
No 60
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=94.59 E-value=0.11 Score=27.76 Aligned_cols=45 Identities=9% Similarity=0.056 Sum_probs=35.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC
Q ss_conf 696410794788999987222089569999806955511222001233
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~ 50 (83)
+++|+.||.|.+...+-+.+ ....|.++|+++.+.+.-+.|....
T Consensus 18 ~ilDiG~g~G~~~~~l~~~~---~~~~v~avDi~~~~l~~a~~n~~~~ 62 (225)
T 3kr9_A 18 ILLDVGSDHAYLPIELVERG---QIKSAIAGEVVEGPYQSAVKNVEAH 62 (225)
T ss_dssp EEEEETCSTTHHHHHHHHTT---SEEEEEEEESSHHHHHHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHCC---CCCEEEEEECCHHHHHHHHHHHHHC
T ss_conf 89996185699999999809---9988997109999999999999982
No 61
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=94.54 E-value=0.096 Score=28.09 Aligned_cols=75 Identities=15% Similarity=0.276 Sum_probs=51.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEE--CCCC----CCCEEEEECCCC
Q ss_conf 6964107947889999872220895699998069555112220012332321158975--3657----887199986899
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK--TQDI----PDHDVLLAGFPC 76 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~--~~~~----~~~D~l~gG~PC 76 (83)
+|+|+||+.||=+..+.....+. -.+.++|+++...+.++.|...... .+|..+. ...+ ..+|.+.--+||
T Consensus 121 ~vLD~CAaPGgKt~~l~~~~~~~--g~i~a~d~~~~R~~~l~~~l~r~g~-~~i~~~~~d~~~~~~~~~~fD~ILlDaPC 197 (315)
T 1ixk_A 121 IVADMAAAPGGKTSYLAQLMRND--GVIYAFDVDENRLRETRLNLSRLGV-LNVILFHSSSLHIGELNVEFDKILLDAPC 197 (315)
T ss_dssp EEEECCSSCSHHHHHHHHHTTTC--SEEEEECSCHHHHHHHHHHHHHHTC-CSEEEESSCGGGGGGGCCCEEEEEEECCT
T ss_pred EEEECCCCCHHHHHHHHHHCCCC--CEEEEECCCHHHHHHHHHHHHHCCC-CCCCEECCCCHHCCCCCCCCCEEEEECCC
T ss_conf 28895777114466533312688--4478410788999999999987187-65211124300001235654379861762
Q ss_pred CCCC
Q ss_conf 7543
Q gi|254780516|r 77 QPFS 80 (83)
Q Consensus 77 q~fS 80 (83)
.+--
T Consensus 198 Sg~G 201 (315)
T 1ixk_A 198 TGSG 201 (315)
T ss_dssp TSTT
T ss_pred CCCC
T ss_conf 5686
No 62
>1or8_A Protein arginine N-methyltransferase 1; protein arginine methylation, adoMet-dependent methylation, transferase; HET: SAH; 2.35A {Rattus norvegicus} SCOP: c.66.1.6 PDB: 1orh_A* 1ori_A*
Probab=94.52 E-value=0.044 Score=29.78 Aligned_cols=65 Identities=20% Similarity=0.327 Sum_probs=40.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHH---HHHHHHC-CCC--CCCCCEEEEEECCCCCCCEEEEE
Q ss_conf 6964107947889999872220895699998069555---1122200-123--32321158975365788719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS---VKTYQAN-FPN--TLIFGDIAKIKTQDIPDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a---~~~y~~n-~~~--~~~~~DI~~~~~~~~~~~D~l~g 72 (83)
+|+|+-||.|.+++-+.++ |.+.|.++|.++.+ .+..+.| +.+ +.+.+|++++... -.++|+++.
T Consensus 60 ~VLDiG~G~G~ls~~aa~~----Ga~~V~ave~s~~~~~a~~~~~~n~~~~~i~~~~~~~~~l~~~-~~~~Dvivs 130 (340)
T 1or8_A 60 VVLDVGSGTGILCMFAAKA----GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELP-VEKVDIIIS 130 (340)
T ss_dssp EEEEETCTTSHHHHHHHHT----TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SSCEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHC----CCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCC-CCCCCEEEE
T ss_conf 7999837887999999980----8988999646199999999999728783279997313430378-653107997
No 63
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=94.35 E-value=0.029 Score=30.70 Aligned_cols=65 Identities=22% Similarity=0.254 Sum_probs=44.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC----CCCCEEEEEECCCCCCCEEEEE
Q ss_conf 696410794788999987222089569999806955511222001233----2321158975365788719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIAKIKTQDIPDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~----~~~~DI~~~~~~~~~~~D~l~g 72 (83)
||||+=||.|.+...|.+. ++..|.++|+++.+.+..+.++.+. ....|++++...+ ..+|+++.
T Consensus 45 ~iLDiGCG~G~~~~~L~~~----g~~~v~giD~s~~~i~~~~~~~~~~~~~~~~~~D~~~l~~~~-~sFD~Vi~ 113 (215)
T 2pxx_A 45 RILVLGCGNSALSYELFLG----GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPS-ASFDVVLE 113 (215)
T ss_dssp CEEEETCTTCSHHHHHHHT----TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCS-SCEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC-CCEEEEEE
T ss_conf 8999637777999999984----898399982762566799998347863543214544577899-97789999
No 64
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii OT3} SCOP: c.66.1.43
Probab=94.29 E-value=0.15 Score=27.09 Aligned_cols=64 Identities=19% Similarity=0.345 Sum_probs=45.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-----CCCCCEEEEEECCCCCCCEEEEEC
Q ss_conf 69641079478899998722208956999980695551122200123-----323211589753657887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-----~~~~~DI~~~~~~~~~~~D~l~gG 73 (83)
|+||+-||-|.+...|.+. +++ +..+|+++...+.-+.+.+. ..+.+|++++..+ .++|+++..
T Consensus 44 ~ILDiGcGtG~~~~~l~~~----g~~-v~gvD~s~~ml~~a~~~~~~~~~~~~~~~~d~~~l~~~--~~fD~V~~~ 112 (252)
T 1wzn_A 44 RVLDLACGTGIPTLELAER----GYE-VVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK--NEFDAVTMF 112 (252)
T ss_dssp EEEEETCTTCHHHHHHHHT----TCE-EEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC--SCEEEEEEC
T ss_pred EEEEECCCCCHHHHHHHHC----CCE-EEEEECCHHHHHHHHHHHHHCCCCCEEEECCHHHCCCC--CCCCEEEEE
T ss_conf 8999547586999999976----998-99997468899999997764287523686554205667--775489996
No 65
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=94.23 E-value=0.15 Score=27.04 Aligned_cols=66 Identities=23% Similarity=0.220 Sum_probs=43.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-----CCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 6964107947889999872220895699998069555112220012332-----321158975365788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-----IFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-----~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
||||+=||.|....-|.+. +++ |.++|+++.+.+..+.+..... ...|+.+.... ..+|+++....
T Consensus 123 ~vLDiGcG~G~~~~~la~~----g~~-v~gvD~s~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~--~~fD~I~~~~~ 193 (286)
T 3m70_A 123 KVLDLGCGQGRNSLYLSLL----GYD-VTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQ--ENYDFIVSTVV 193 (286)
T ss_dssp EEEEESCTTCHHHHHHHHT----TCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCC--SCEEEEEECSS
T ss_pred EEEEECCCCCHHHHHHHHC----CCE-EEEEECCHHHHHHHHHHHHHCCCCCEEEECHHHHHCCC--CCCCEEEEEEE
T ss_conf 7999837798999999858----997-99998988999999986542266202444002211013--56757878607
No 66
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=94.17 E-value=0.065 Score=28.93 Aligned_cols=68 Identities=13% Similarity=0.182 Sum_probs=45.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC---CCCCEEEEEECCCCCCCEEEEECC
Q ss_conf 2696410794788999987222089569999806955511222001233---232115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~---~~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
.||||+=||-|.....+.+. +...|.++|+++...+.-+.+.... .+.+|+.++...+ ..+|+++...
T Consensus 46 ~~VLDiGcG~G~~~~~l~~~----g~~~v~giD~S~~~i~~a~~~~~~~~~~~~~~d~~~l~~~~-~~fD~V~~~~ 116 (253)
T 3g5l_A 46 KTVLDLGCGFGWHCIYAAEH----GAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEP-DAYNVVLSSL 116 (253)
T ss_dssp CEEEEETCTTCHHHHHHHHT----TCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCT-TCEEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHC----CCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC
T ss_conf 98999837784999999964----99989999485065689987403444322222224566567-5555342111
No 67
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima MSB8} SCOP: c.66.1.41
Probab=94.06 E-value=0.063 Score=29.00 Aligned_cols=64 Identities=14% Similarity=0.148 Sum_probs=46.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEE
Q ss_conf 6964107947889999872220895699998069555112220012332321158975365788719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~g 72 (83)
||||+=||.|.+...|... +++ |..+|+++...+.-+.+.+...+.+++.+++..+ ..+|+++.
T Consensus 57 ~VLDiGCGtG~~~~~la~~----g~~-v~giD~S~~ml~~Ak~~~~~~~~~~~~~~l~~~~-~~fD~Iis 120 (260)
T 2avn_A 57 RVLDLGGGTGKWSLFLQER----GFE-VVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPS-GAFEAVLA 120 (260)
T ss_dssp EEEEETCTTCHHHHHHHTT----TCE-EEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCT-TCEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHC----CCE-EEEEECHHHHHHHHHHHCCCCCCCCHHHHCCCCC-CCCCHHHH
T ss_conf 8999899998889999861----998-9999352378899988363220001575088864-67356550
No 68
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=93.99 E-value=0.093 Score=28.15 Aligned_cols=68 Identities=12% Similarity=0.117 Sum_probs=45.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-CCEEEE-EECCCCCCCEEEEECC
Q ss_conf 269641079478899998722208956999980695551122200123323-211589-7536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAK-IKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-~~DI~~-~~~~~~~~~D~l~gG~ 74 (83)
.||+|+-||.|.+...|.+. +.+ |.++|+++...+.-+.|.++... ..+..+ +...+-..+|+++..+
T Consensus 50 ~rVLDvGCGtG~~a~~La~~----g~~-V~giD~S~~mi~~Ar~~~~~~~~~~~~~~~~lp~~~~~~FD~V~s~~ 119 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQ----AAR-WAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR 119 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGG----SSE-EEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHCC----CCE-EEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEECC
T ss_conf 97999884658645777516----868-99657999999999985899978997466679887899646999768
No 69
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 1pry_A
Probab=93.99 E-value=0.075 Score=28.63 Aligned_cols=75 Identities=16% Similarity=0.201 Sum_probs=48.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC----CCCCEEEEEEC--CCCCCCEEEEECCC
Q ss_conf 2696410794788999987222089569999806955511222001233----23211589753--65788719998689
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIAKIKT--QDIPDHDVLLAGFP 75 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~----~~~~DI~~~~~--~~~~~~D~l~gG~P 75 (83)
.||+||.||.|....-+....... -.|+++|+++.+.+..+.+.... ++..|..+... .....+|++....+
T Consensus 75 ~~VLDlG~G~G~~~~~la~~vg~~--G~V~avD~s~~~l~~l~~~~~~~~ni~~v~~da~~~~~~~~~~~~vd~v~~~~~ 152 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWE--GKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTT--SEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CEEEEEECCCCHHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCEEEEEEEEEC
T ss_conf 999997178788999999984899--669999899999999998787669834999876794465445671999997600
Q ss_pred CCC
Q ss_conf 975
Q gi|254780516|r 76 CQP 78 (83)
Q Consensus 76 Cq~ 78 (83)
+.+
T Consensus 153 ~~~ 155 (227)
T 1g8a_A 153 QPT 155 (227)
T ss_dssp STT
T ss_pred CCC
T ss_conf 054
No 70
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=93.98 E-value=0.053 Score=29.39 Aligned_cols=44 Identities=9% Similarity=0.008 Sum_probs=35.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC
Q ss_conf 69641079478899998722208956999980695551122200123
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~ 49 (83)
|++|+.||-|-+...|-..+ ....|.++|+++.+.+.-+.|...
T Consensus 24 ~vlDiGcg~G~l~~~l~~~~---~~~~V~avDi~~~~l~~A~~n~~~ 67 (244)
T 3gnl_A 24 RIADIGSDHAYLPCFAVKNQ---TASFAIAGEVVDGPFQSAQKQVRS 67 (244)
T ss_dssp EEEEETCSTTHHHHHHHHTT---SEEEEEEEESSHHHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHCC---CCCEEEEEECCHHHHHHHHHHHHH
T ss_conf 89997186489999999809---998899963889999999999998
No 71
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A
Probab=93.97 E-value=0.056 Score=29.25 Aligned_cols=69 Identities=17% Similarity=0.232 Sum_probs=46.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-------CCCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 69641079478899998722208956999980695551122200123-------32321158975365788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-------~~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
||||+=||.|+...-|.+. .+. .|.++|+++...+..+.+.+. ..+.+|+.+++..+ ..+|++++...
T Consensus 49 ~VLDIGCG~G~~~~~lA~~---~~~-~V~giD~s~~~l~~a~~~~~~~~l~~~v~~~~~d~~~l~~~~-~~FD~I~s~~~ 123 (267)
T 3kkz_A 49 LIADIGCGTGGQTMVLAGH---VTG-QVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRN-EELDLIWSEGA 123 (267)
T ss_dssp EEEEETCTTCHHHHHHHTT---CSS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCT-TCEEEEEESSC
T ss_pred EEEEECCCCCHHHHHHHHH---CCC-EEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCC-CCEEEEEECHH
T ss_conf 8999627897999999974---799-899997973165898873232344433100100123567788-84668974043
Q ss_pred C
Q ss_conf 9
Q gi|254780516|r 76 C 76 (83)
Q Consensus 76 C 76 (83)
.
T Consensus 124 l 124 (267)
T 3kkz_A 124 I 124 (267)
T ss_dssp G
T ss_pred H
T ss_conf 7
No 72
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1, methyltransferase domain, structural genomics; HET: MSE; 1.60A {Mesorhizobium loti MAFF303099}
Probab=93.84 E-value=0.092 Score=28.18 Aligned_cols=67 Identities=19% Similarity=0.253 Sum_probs=46.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC---CCCEEEEEECCCCCCCEEEEEC
Q ss_conf 26964107947889999872220895699998069555112220012332---3211589753657887199986
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---IFGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~---~~~DI~~~~~~~~~~~D~l~gG 73 (83)
.||+|+=||-|.+...|... +...|.++|+++.+.+.-+++.+... +.+|+.++...+ ..+|+++..
T Consensus 45 ~rVLDiGCG~G~~~~~l~~~----~~~~V~gvD~S~~~l~~a~~~~~~~~v~~~~~d~~~~~~~~-~~fD~V~~~ 114 (243)
T 3bkw_A 45 LRIVDLGCGFGWFCRWAHEH----GASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQ-DSFDLAYSS 114 (243)
T ss_dssp CEEEEETCTTCHHHHHHHHT----TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCT-TCEEEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHC----CCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCE
T ss_conf 99999788898999999975----98789998757989999986134443331002334466554-345456551
No 73
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=93.81 E-value=0.24 Score=26.10 Aligned_cols=44 Identities=11% Similarity=0.017 Sum_probs=36.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC
Q ss_conf 69641079478899998722208956999980695551122200123
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~ 49 (83)
+++|+-||-|.+...|-..+ ....|.++|+++.+.+..+.|...
T Consensus 24 ~vlDIG~g~G~l~i~l~~~~---~~~~viavDi~~~~l~~A~~n~~~ 67 (230)
T 3lec_A 24 RLLDVGSDHAYLPIFLLQMG---YCDFAIAGEVVNGPYQSALKNVSE 67 (230)
T ss_dssp EEEEETCSTTHHHHHHHHTT---CEEEEEEEESSHHHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHCC---CCCEEEEEECCHHHHHHHHHHHHH
T ss_conf 99995286499999999839---998799930999999999999998
No 74
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=93.75 E-value=0.083 Score=28.40 Aligned_cols=72 Identities=17% Similarity=0.230 Sum_probs=48.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC----CCCCCEEEEEECCCCCCCEEEEECCCCC
Q ss_conf 269641079478899998722208956999980695551122200123----3232115897536578871999868997
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAKIKTQDIPDHDVLLAGFPCQ 77 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~----~~~~~DI~~~~~~~~~~~D~l~gG~PCq 77 (83)
.||||+=||.|.+...+.+.. .+ ..+..+|+++...+..+.+++. ..+.+|+.++... ..+|+++....-+
T Consensus 46 ~~VLDiGcG~G~~~~~l~~~~--~~-~~v~giD~s~~~l~~A~~~~~~~~~v~~~~~D~~~~~~~--~~fD~I~~~~~l~ 120 (234)
T 3dtn_A 46 PDILDLGAGTGLLSAFLMEKY--PE-ATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE--EKYDMVVSALSIH 120 (234)
T ss_dssp CEEEEETCTTSHHHHHHHHHC--TT-CEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC--SCEEEEEEESCGG
T ss_pred CEEEEECCCCCHHHHHHHHHC--CC-CEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCC--CCHHHHHHHHHHH
T ss_conf 959998176859999999988--99-689999585045789998630277624774200134544--5513455577787
Q ss_pred C
Q ss_conf 5
Q gi|254780516|r 78 P 78 (83)
Q Consensus 78 ~ 78 (83)
-
T Consensus 121 ~ 121 (234)
T 3dtn_A 121 H 121 (234)
T ss_dssp G
T ss_pred C
T ss_conf 0
No 75
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, antibiotic resistance, methyltransferase; 1.44A {Aquifex aeolicus VF5} PDB: 3ftc_A 3fte_A 3ftf_A*
Probab=93.68 E-value=0.059 Score=29.14 Aligned_cols=71 Identities=14% Similarity=0.188 Sum_probs=51.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC--CCCCCEEEEEECCCCCCCEEEEECCCCC
Q ss_conf 69641079478899998722208956999980695551122200123--3232115897536578871999868997
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKIKTQDIPDHDVLLAGFPCQ 77 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~--~~~~~DI~~~~~~~~~~~D~l~gG~PCq 77 (83)
+|+|.=.|-|.++..|-. .+.+.+.++|+|+.....++..+.. ..+++|+.+++...++....++|-.|=+
T Consensus 34 ~VlEIGpG~G~LT~~Ll~----~~~~~v~aiE~D~~l~~~l~~~~~~~~~ii~~D~l~~~~~~~~~~~~vVgNLPY~ 106 (249)
T 3ftd_A 34 TVVEVGGGTGNLTKVLLQ----HPLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKELKVVGNLPYN 106 (249)
T ss_dssp EEEEEESCHHHHHHHHTT----SCCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSSEEEEEECCTT
T ss_pred EEEEECCCCCHHHHHHHH----HCCCEEEEEEECCCCHHHHHHHCCCCEEEEECCHHHCCHHHCCCCCEEEECCCHH
T ss_conf 499969987698999997----0457078999866200132222044328996340117864629762586144210
No 76
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=93.64 E-value=0.29 Score=25.67 Aligned_cols=70 Identities=13% Similarity=0.024 Sum_probs=44.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC------CCCEEEEEECCCC----CCCEEEEE
Q ss_conf 6964107947889999872220895699998069555112220012332------3211589753657----88719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL------IFGDIAKIKTQDI----PDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~------~~~DI~~~~~~~~----~~~D~l~g 72 (83)
||+|+-||.|.+..-|.+. .+...|..+|+++...+.-+.+..... ...+....+..++ ..+|++++
T Consensus 32 rVLDvGCG~G~~~~~La~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 108 (219)
T 3jwg_A 32 KVIDLGCGEGNLLSLLLKD---KSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATV 108 (219)
T ss_dssp EEEEETCTTCHHHHHHHTS---TTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEE
T ss_pred EEEEEECCCCHHHHHHHHH---CCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHCCHHCCCCCEEHH
T ss_conf 8999818789999999983---8974563225999999999998655044123200100011453325000365545627
Q ss_pred CCC
Q ss_conf 689
Q gi|254780516|r 73 GFP 75 (83)
Q Consensus 73 G~P 75 (83)
..-
T Consensus 109 ~~v 111 (219)
T 3jwg_A 109 IEV 111 (219)
T ss_dssp ESC
T ss_pred HHH
T ss_conf 556
No 77
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=93.58 E-value=0.099 Score=28.01 Aligned_cols=67 Identities=21% Similarity=0.266 Sum_probs=48.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC----CCCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 69641079478899998722208956999980695551122200123----32321158975365788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~----~~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
+|+|.=+|.|.++..|-..+ ..|.++|+|+...+.++.++.+ +.+.+|+.+++..+... ..++|-.|
T Consensus 33 ~VlEIGpG~G~LT~~L~~~~-----~~v~avEiD~~l~~~L~~~~~~~~n~~ii~~D~l~~~~~~~~~-~~vv~NLP 103 (244)
T 1qam_A 33 NIFEIGSGKGHFTLELVQRC-----NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQS-YKIFGNIP 103 (244)
T ss_dssp EEEEECCTTSHHHHHHHHHS-----SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCC-CEEEEECC
T ss_pred EEEEECCCCCHHHHHHHHCC-----CCEEEEEECHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCC-EEEEEECH
T ss_conf 79997388719999998555-----8306998530177999974144776577300122256544675-47997430
No 78
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=93.57 E-value=0.057 Score=29.22 Aligned_cols=68 Identities=22% Similarity=0.288 Sum_probs=42.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-------CCCEEEEEECCCCCCCEEEEECC
Q ss_conf 6964107947889999872220895699998069555112220012332-------32115897536578871999868
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-------~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
+||||-||-|+...-+... ++..|..+|+++.+.+.-+.++.... ..+|+.......-..+|++++.+
T Consensus 67 ~VLDlGCG~G~~~~~~~~~----~~~~v~GiD~S~~~l~~a~~r~~~~~~~~~~~f~~~d~~~~~~~~~~~fD~V~~~~ 141 (298)
T 1ri5_A 67 SVLDLGCGKGGDLLKYERA----GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp EEEEETCTTTTTHHHHHHH----TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred EEEEECCCCCHHHHHHHHC----CCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCCCCCCCCEEEECC
T ss_conf 8999637087899999966----99858875899999999999987528875237786456552101377755899736
No 79
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.50A {Clostridium acetobutylicum atcc 824} SCOP: c.66.1.43
Probab=93.34 E-value=0.067 Score=28.88 Aligned_cols=63 Identities=17% Similarity=0.332 Sum_probs=44.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC-----CCCCCCEEEEEECCCCCCCEEEEE
Q ss_conf 6964107947889999872220895699998069555112220012-----332321158975365788719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-----NTLIFGDIAKIKTQDIPDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~-----~~~~~~DI~~~~~~~~~~~D~l~g 72 (83)
++||+-||-|.....|.+. +++ |.++|+++...+.-+.+.+ ....++|+.++... ..+|+++.
T Consensus 40 ~iLDlGCGtG~~~~~l~~~----g~~-v~gvD~S~~ml~~a~~~~~~~~~~~~~~~~d~~~~~~~--~~fD~V~~ 107 (246)
T 1y8c_A 40 DYLDLACGTGNLTENLCPK----FKN-TWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN--RKFDLITC 107 (246)
T ss_dssp EEEEETCTTSTTHHHHGGG----SSE-EEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS--CCEEEEEE
T ss_pred EEEEEECCCCHHHHHHHHC----CCE-EEEEECCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCC--CCCCCCCE
T ss_conf 2999807462999999974----995-99996749999987631122344322234667775103--34122412
No 80
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=92.89 E-value=0.077 Score=28.56 Aligned_cols=63 Identities=13% Similarity=0.317 Sum_probs=44.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC---------CCCCEEEEEECCCCCCCEEEEE
Q ss_conf 696410794788999987222089569999806955511222001233---------2321158975365788719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---------LIFGDIAKIKTQDIPDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~---------~~~~DI~~~~~~~~~~~D~l~g 72 (83)
||||+-||.|.....|.+. +++ |..+|+++...+..+.+.+.. .+.+|+.++... ..+|+++.
T Consensus 85 ~vLDlGcG~G~~~~~la~~----g~~-v~gvD~s~~ml~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~fD~v~~ 156 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDL----GWE-VTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALD--KRFGTVVI 156 (299)
T ss_dssp CEEEETCTTTTTHHHHHTT----TCC-EEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCS--CCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHC----CCE-EEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHCCCC--CCCCEEEE
T ss_conf 7999916677899999977----997-999969999999999999864766322044786032106745--55312489
No 81
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=92.84 E-value=0.1 Score=27.95 Aligned_cols=66 Identities=20% Similarity=0.160 Sum_probs=47.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-CCCEEEEEECCCCCCCEEEEECC
Q ss_conf 6964107947889999872220895699998069555112220012332-32115897536578871999868
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
||+|+=||-|.+...|... +++ +..+|+++...+.-++++++.. +.+|+.++...+ ..+|+++...
T Consensus 44 rVLDiGcG~G~~~~~la~~----g~~-v~gvD~S~~~l~~ar~~~~~~~~~~~d~~~l~~~~-~~fD~I~~~~ 110 (203)
T 3h2b_A 44 VILDVGSGTGRWTGHLASL----GHQ-IEGLEPATRLVELARQTHPSVTFHHGTITDLSDSP-KRWAGLLAWY 110 (203)
T ss_dssp CEEEETCTTCHHHHHHHHT----TCC-EEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSC-CCEEEEEEES
T ss_pred CEEEECCCCCHHHHHHHHC----CCE-EEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCCC-CCCCEEEEEC
T ss_conf 4999737887999999977----996-99996978899999744887349986210122345-6666899946
No 82
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron}
Probab=92.77 E-value=0.13 Score=27.50 Aligned_cols=67 Identities=22% Similarity=0.336 Sum_probs=45.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC-------CCCCEEEEEECCCCCCCEEEEECC
Q ss_conf 696410794788999987222089569999806955511222001233-------232115897536578871999868
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~-------~~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
||+|+=||.|.....|.+. .+.+ |.++|+++...+..+.+.... .+.+|+.++...+ ..+|++++..
T Consensus 49 rVLDlGCG~G~~~~~La~~---~~~~-v~gvD~S~~ml~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~-~~fD~V~~~~ 122 (257)
T 3f4k_A 49 KIADIGCGTGGQTLFLADY---VKGQ-ITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQN-EELDLIWSEG 122 (257)
T ss_dssp EEEEETCTTSHHHHHHHHH---CCSE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCT-TCEEEEEEES
T ss_pred EEEEECCCCCHHHHHHHHH---CCCE-EEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC-CCCCEEEEHH
T ss_conf 7999717797999999986---6997-99996845677888987764321000011130388762368-8521898605
No 83
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=92.69 E-value=0.18 Score=26.67 Aligned_cols=65 Identities=12% Similarity=0.233 Sum_probs=46.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC--CCCCEEEEEECCCCCCCEEEEECC
Q ss_conf 696410794788999987222089569999806955511222001233--232115897536578871999868
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~--~~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
+|+|+=||-|.+..-+... +++ +.++|+++...+..+.++++. ...+|+.++... ..+|+++...
T Consensus 48 ~vLDiGcG~G~~~~~l~~~----~~~-v~gvD~S~~mi~~a~~k~~~~~~~~~~d~~~~~~~--~~fD~I~~~~ 114 (220)
T 3hnr_A 48 NVLEFGVGTGNLTNKLLLA----GRT-VYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP--TSIDTIVSTY 114 (220)
T ss_dssp EEEEECCTTSHHHHHHHHT----TCE-EEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC--SCCSEEEEES
T ss_pred EEEEECCCCCHHHHHHHHC----CCE-EEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCC--CCCCEEEEHH
T ss_conf 3999728785999999977----998-99995835778998742565410334445444017--7648897634
No 84
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus HB27}
Probab=92.37 E-value=0.15 Score=27.06 Aligned_cols=73 Identities=15% Similarity=0.200 Sum_probs=46.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC-------CCCCEEEEEECCCCCCCEEEEECC
Q ss_conf 2696410794788999987222089569999806955511222001233-------232115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~-------~~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
.||+|+-+|-|.+++.|.++... --.|.++|+++...+.-+.|.... .+.+|+.+....+ ..+|.++...
T Consensus 98 ~~VLEiG~GsG~lt~~lA~~v~~--~g~V~~~d~~~~~~~~A~~n~~~~~~~~~v~~~~~d~~~~~~~~-~~~d~v~ld~ 174 (258)
T 2pwy_A 98 MRVLEAGTGSGGLTLFLARAVGE--KGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEE-AAYDGVALDL 174 (258)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCT--TSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCT-TCEEEEEEES
T ss_pred CEEEECCCCHHHHHHHHHHHCCC--CCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCC-CCCCEEEECC
T ss_conf 99998777067999999997288--73899984899999999999998089985568836578855556-4323899648
Q ss_pred CCC
Q ss_conf 997
Q gi|254780516|r 75 PCQ 77 (83)
Q Consensus 75 PCq 77 (83)
|..
T Consensus 175 p~p 177 (258)
T 2pwy_A 175 MEP 177 (258)
T ss_dssp SCG
T ss_pred CCH
T ss_conf 899
No 85
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, structural genomics; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=92.15 E-value=0.23 Score=26.17 Aligned_cols=75 Identities=20% Similarity=0.195 Sum_probs=44.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCC----------CEEEEEEECCHHHHHHHHHCCC---CCCCCCEEEEEECCC---CC
Q ss_conf 2696410794788999987222089----------5699998069555112220012---332321158975365---78
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRN----------VECFFSSEINPYSVKTYQANFP---NTLIFGDIAKIKTQD---IP 65 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~----------~~~v~a~e~d~~a~~~y~~n~~---~~~~~~DI~~~~~~~---~~ 65 (83)
-+|+|-+||.|||-..+-+...+.. -..++..|+++.+...-+.|.- ......++..-+..+ ..
T Consensus 173 ~~IlDPacGsG~fL~~~~~~~~~~~~~~~~~~~~~~~~i~G~e~~~~~~~la~~nl~l~~~~~~~~~i~~~d~~~~~~~~ 252 (445)
T 2okc_A 173 ETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEPST 252 (445)
T ss_dssp CCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCCSS
T ss_pred CEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCEECEECCHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHCCCC
T ss_conf 97812788976659999999987312277775530101423412099999999623102776432012215303202434
Q ss_pred CCEEEEECCCC
Q ss_conf 87199986899
Q gi|254780516|r 66 DHDVLLAGFPC 76 (83)
Q Consensus 66 ~~D~l~gG~PC 76 (83)
++|++++=||=
T Consensus 253 ~fD~Ii~NPPf 263 (445)
T 2okc_A 253 LVDVILANPPF 263 (445)
T ss_dssp CEEEEEECCCS
T ss_pred CCCEEECCCCC
T ss_conf 68722458997
No 86
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=92.06 E-value=0.19 Score=26.56 Aligned_cols=69 Identities=13% Similarity=0.095 Sum_probs=42.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEEC-CCC--CCCEEEEEC
Q ss_conf 269641079478899998722208956999980695551122200123323211589753-657--887199986
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT-QDI--PDHDVLLAG 73 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~-~~~--~~~D~l~gG 73 (83)
-||+|+=||.|.+...+.+.. +--.|.++|+++...+.-+.|.........+...+. ... ..+|+++..
T Consensus 51 ~~VLDiGCG~G~~~~~la~~~---p~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 122 (200)
T 3fzg_A 51 SSILDFGCGFNPLALYQWNEN---EKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYKGTYDVVFLL 122 (200)
T ss_dssp SEEEEETCTTHHHHHHHHCSS---CCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHHTTSEEEEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCEEEEC
T ss_conf 879995886787799999878---997899985999999999851023288515665101333447896989873
No 87
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=91.72 E-value=0.3 Score=25.63 Aligned_cols=70 Identities=13% Similarity=-0.008 Sum_probs=41.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHH-------HHCCCCCCCCCEEEEEECC----------CC
Q ss_conf 269641079478899998722208956999980695551122-------2001233232115897536----------57
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY-------QANFPNTLIFGDIAKIKTQ----------DI 64 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y-------~~n~~~~~~~~DI~~~~~~----------~~ 64 (83)
.+|+|+++|.|..++-+-.+ +.+ |.++|.+|.....+ +.|..-......|+-+..+ .-
T Consensus 85 ~~VLD~taGlG~Da~~lA~~----G~~-V~~vE~sp~~~~Ll~~~l~~a~~~~~~~~~~~ri~~~~gDa~~~l~~l~~~~ 159 (258)
T 2r6z_A 85 PTVWDATAGLGRDSFVLASL----GLT-VTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQ 159 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHT----TCC-EEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHC----CCE-EEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHCC
T ss_conf 81999078735999999976----998-9999688899999999999999696876788755710075999999999638
Q ss_pred CCCEEEEECCCC
Q ss_conf 887199986899
Q gi|254780516|r 65 PDHDVLLAGFPC 76 (83)
Q Consensus 65 ~~~D~l~gG~PC 76 (83)
..+|++.--||=
T Consensus 160 ~~~DvIylDPMf 171 (258)
T 2r6z_A 160 GKPDIVYLDPMY 171 (258)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
T ss_conf 998889988999
No 88
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase, structural genomics; 1.90A {Anabaena variabilis atcc 29413}
Probab=91.71 E-value=0.22 Score=26.28 Aligned_cols=67 Identities=18% Similarity=0.304 Sum_probs=47.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-CCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 26964107947889999872220895699998069555112220012332-321158975365788719998689
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
.||+|+=||.|.+...|.+. +.+ |.++|+++...+.-+.++++.. ..+|+.+.... ..+|+++...-
T Consensus 59 ~~VLDiGcG~G~~~~~la~~----~~~-v~giD~s~~ml~~a~~~~~~~~~~~~~~~~~~~~--~~fD~v~~~~~ 126 (279)
T 3ccf_A 59 EFILDLGCGTGQLTEKIAQS----GAE-VLGTDNAATMIEKARQNYPHLHFDVADARNFRVD--KPLDAVFSNAM 126 (279)
T ss_dssp CEEEEETCTTSHHHHHHHHT----TCE-EEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCS--SCEEEEEEESC
T ss_pred CEEEEECCCCCHHHHHHHHC----CCE-EEEEECHHHHHHHHHHHCCCCCEEEHHHCCCCCC--CCCCEEEEEEC
T ss_conf 99999358585999999964----998-9999163889999986165431110000013567--65538977520
No 89
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, alternative splicing; 2.55A {Rattus norvegicus}
Probab=91.61 E-value=0.12 Score=27.60 Aligned_cols=65 Identities=15% Similarity=0.322 Sum_probs=41.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHH---HHHHHHC-CCC--CCCCCEEEEEECCCCCCCEEEEEC
Q ss_conf 6964107947889999872220895699998069555---1122200-123--323211589753657887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS---VKTYQAN-FPN--TLIFGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a---~~~y~~n-~~~--~~~~~DI~~~~~~~~~~~D~l~gG 73 (83)
+|+|+-||-|-+++-+.++ |.+.|+++|.++-+ ++..+.| +.+ +.+.+|++++... .++|+++.-
T Consensus 161 vVLDvGcGtGiLs~~AA~a----GA~kV~avE~S~~a~~A~~~v~~Ngl~d~I~vi~g~~e~l~lp--e~vDvIVSE 231 (480)
T 3b3j_A 161 IVLDVGCGSGILSFFAAQA----GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP--EQVDIIISE 231 (480)
T ss_dssp EEEEESCSTTHHHHHHHHT----TCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS--SCEEEEECC
T ss_pred EEEEECCCCCHHHHHHHHC----CCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCC--CCCCEEEEE
T ss_conf 8999688836999999985----9988999909599999999999749986168997527656767--666789998
No 90
>3b3f_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase, catalytic domain, alternative splicing, chromatin regulator; HET: SAH; 2.20A {Rattus norvegicus} PDB: 3b3g_A 2v74_B* 2v7e_A
Probab=91.60 E-value=0.14 Score=27.22 Aligned_cols=64 Identities=16% Similarity=0.345 Sum_probs=40.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHH---HHHHC-CCC--CCCCCEEEEEECCCCCCCEEEEE
Q ss_conf 696410794788999987222089569999806955511---22200-123--32321158975365788719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK---TYQAN-FPN--TLIFGDIAKIKTQDIPDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~---~y~~n-~~~--~~~~~DI~~~~~~~~~~~D~l~g 72 (83)
+|+|+=||.|.+++-+.++ |.+.|.++|.++.+.. ..+.| +.+ +.+.+|++++... .++|+++.
T Consensus 49 ~VLDiGcG~G~ls~~aa~~----Ga~~V~~~e~s~~~~~~~~~~~~n~~~~~I~~i~~~~~~l~l~--~~~Dvivs 118 (341)
T 3b3f_A 49 IVLDVGCGSGILSFFAAQA----GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP--EQVDIIIS 118 (341)
T ss_dssp EEEEESCTTSHHHHHHHHT----TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS--SCEEEEEC
T ss_pred EEEEECCCCCHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCC--CCCCEEEE
T ss_conf 8999666853999999976----9998999979099999999999859986400796036652567--66337987
No 91
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=91.46 E-value=0.27 Score=25.86 Aligned_cols=69 Identities=14% Similarity=0.207 Sum_probs=44.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHC-----CCCC-CCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 269641079478899998722208956999980695551122200-----1233-2321158975365788719998689
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNT-LIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n-----~~~~-~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
.||||+=||.|.+...+.+. +.+ |..+|+++...+.-+.+ .++. .+.+|+.++...+ ..+|+++...-
T Consensus 23 ~rVLDiGCGtG~~~~~la~~----~~~-v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~d~~~l~~~d-~~fD~v~~~~~ 96 (239)
T 1xxl_A 23 HRVLDIGAGAGHTALAFSPY----VQE-CIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPD-DSFDIITCRYA 96 (239)
T ss_dssp CEEEEESCTTSHHHHHHGGG----SSE-EEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCT-TCEEEEEEESC
T ss_pred CEEEEECCCCCHHHHHHHHC----CCE-EEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCC-CCEEEEHHCCC
T ss_conf 98999588685999999970----997-9999799999999998654305654000102223568888-73653020451
Q ss_pred C
Q ss_conf 9
Q gi|254780516|r 76 C 76 (83)
Q Consensus 76 C 76 (83)
-
T Consensus 97 l 97 (239)
T 1xxl_A 97 A 97 (239)
T ss_dssp G
T ss_pred H
T ss_conf 2
No 92
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltransferase, structural genomics, PSI-2, protein structure initiative; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=91.46 E-value=0.13 Score=27.36 Aligned_cols=68 Identities=25% Similarity=0.265 Sum_probs=49.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-CCCEEEEEECCCCCCCEEEEECC
Q ss_conf 26964107947889999872220895699998069555112220012332-32115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
.||+|+=||-|.+...+.+.. +-..+.++|+++...+.-+.+.|+.. ..+|+.++... +.+|+++...
T Consensus 35 ~rVLDiGCGtG~~t~~la~~~---~~~~v~gvD~S~~ml~~A~~~~~~v~~~~~d~~~~~~~--~~fD~V~s~~ 103 (259)
T 2p35_A 35 LNGYDLGCGPGNSTELLTDRY---GVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPA--QKADLLYANA 103 (259)
T ss_dssp SSEEEETCTTTHHHHHHHHHH---CTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCS--SCEEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHHC---CCCEEEEEECCHHHHHHHHHHCCCCCCEEEEHHHCCCC--CCCCEECCCC
T ss_conf 989998162869999999878---99879999898799999997256631201424212435--4555641201
No 93
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=91.41 E-value=0.18 Score=26.68 Aligned_cols=70 Identities=16% Similarity=0.200 Sum_probs=44.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC-----C-CCCCCEEEEEECCCCCCCEEEEECC
Q ss_conf 26964107947889999872220895699998069555112220012-----3-3232115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-----N-TLIFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~-----~-~~~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
.||+|+=||.|.+..-+.+... .+.+ |.++|+++...+..+.+.. + ..+.+|++++...+ ..+|+++...
T Consensus 39 ~~VLDiGcG~G~~~~~la~~~~-~~~~-v~giD~s~~~i~~a~~~~~~~~~~~v~~~~~d~~~lp~~~-~sfD~V~~~~ 114 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVG-EKGK-VYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPD-NTVDFIFMAF 114 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHT-TTCE-EEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCS-SCEEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHHCC-CCEE-EEEEEEHHHHHHHHHHHHHHHHCCEEHHHHHHHHCCCCCC-CCEEEHHHCC
T ss_conf 9999987888877999997508-9839-9998500377889999767640221001000333277555-5421357314
No 94
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative, SAM-dependent methyltransferase; HET: SAI; 1.94A {Leishmania major strain friedlin} SCOP: c.66.1.42
Probab=91.39 E-value=0.17 Score=26.85 Aligned_cols=71 Identities=13% Similarity=0.073 Sum_probs=45.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC----CCCEEEEEECCCCCCCEEEEECCCCC
Q ss_conf 26964107947889999872220895699998069555112220012332----32115897536578871999868997
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL----IFGDIAKIKTQDIPDHDVLLAGFPCQ 77 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~----~~~DI~~~~~~~~~~~D~l~gG~PCq 77 (83)
-|+||+=||.|.....|-.- .+..|..+|+++...+.-+.+..... +++|+.++...+ ...|+++......
T Consensus 95 ~~vLDiGcG~G~~t~~ll~~----~~~~V~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~~~~~-~~fD~I~~~~~l~ 169 (254)
T 1xtp_A 95 SRALDCGAGIGRITKNLLTK----LYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPP-NTYDLIVIQWTAI 169 (254)
T ss_dssp SEEEEETCTTTHHHHHTHHH----HCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCS-SCEEEEEEESCGG
T ss_pred CEEEEECCCCCHHHHHHHHH----CCCEEEEEECCHHHHHHHHHCCCCCCEEEEEECCHHHCCCCC-CCCCEEEEEEEHH
T ss_conf 73899667885999999986----398589991988999998640157742799977875688877-7634676421100
No 95
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=91.20 E-value=0.61 Score=24.06 Aligned_cols=63 Identities=10% Similarity=0.100 Sum_probs=41.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-------CCEEEEEECCCCCCCEEEEE
Q ss_conf 69641079478899998722208956999980695551122200123323-------21158975365788719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-------FGDIAKIKTQDIPDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-------~~DI~~~~~~~~~~~D~l~g 72 (83)
||||+=||.|.....|.+. +++ |.++|+++.+.+..+.+++.... .+|+.+.... ..+|+++.
T Consensus 69 rVLdlGCG~G~~~~~la~~----g~~-V~giD~S~~ai~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~~fD~i~~ 138 (235)
T 3lcc_A 69 RALVPGCGGGHDVVAMASP----ERF-VVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPT--ELFDLIFD 138 (235)
T ss_dssp EEEEETCTTCHHHHHHCBT----TEE-EEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCS--SCEEEEEE
T ss_pred CEEEECCCCCHHHHHHHHC----CCE-EEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCC--CCCCEEEE
T ss_conf 4899438887899999866----987-9997466999999999876415442100232567671755--66457999
No 96
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assembly S-adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=91.18 E-value=0.19 Score=26.57 Aligned_cols=67 Identities=18% Similarity=0.276 Sum_probs=48.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCC---CC-CCCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 696410794788999987222089569999806955511222001---23-32321158975365788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PN-TLIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~---~~-~~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
+|+|.=.|.|.++..|-.. .+.|.++|+|+...+.++..+ ++ ..+.+|+.+++...++ .+.++|-.|
T Consensus 53 ~VlEIGpG~G~LT~~Ll~~-----~~~v~aiEiD~~l~~~L~~~~~~~~n~~ii~~D~l~~d~~~~~-~~~vv~NLP 123 (295)
T 3gru_A 53 VVLEIGLGKGILTEELAKN-----AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLD-FNKVVANLP 123 (295)
T ss_dssp EEEEECCTTSHHHHHHHHH-----SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSC-CSEEEEECC
T ss_pred EEEEECCCHHHHHHHHHHC-----CCCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHCC-CCEEEEEEH
T ss_conf 5999799746999999816-----8966999988799999997676427736885121037713337-553786202
No 97
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=90.98 E-value=0.71 Score=23.72 Aligned_cols=71 Identities=20% Similarity=0.103 Sum_probs=46.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC-------CCCCEEEEEECCCCCCCEEEEECC
Q ss_conf 2696410794788999987222089569999806955511222001233-------232115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~-------~~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
.||+|+-+|-|++++.|-++.... -.|.++|+++...+.-+.|+... ...+|+..-.. -..+|.++.-.
T Consensus 95 ~rVLd~G~GsG~lt~~lar~~~~~--G~V~~~D~~~~~~~~A~~n~~~~gl~~~v~~~~~D~~~~~~--~~~~D~V~ld~ 170 (255)
T 3mb5_A 95 DFIVEAGVGSGALTLFLANIVGPE--GRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIE--EENVDHVILDL 170 (255)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCC--CCSEEEEEECS
T ss_pred CEEEECCCCCHHHHHHHHHHCCCC--CEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCC--CCCCCEEEEEC
T ss_conf 989988866279999999743889--77998349999999999999971998149999461103555--56565799966
Q ss_pred CC
Q ss_conf 99
Q gi|254780516|r 75 PC 76 (83)
Q Consensus 75 PC 76 (83)
|-
T Consensus 171 p~ 172 (255)
T 3mb5_A 171 PQ 172 (255)
T ss_dssp SC
T ss_pred CC
T ss_conf 85
No 98
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=90.97 E-value=0.2 Score=26.46 Aligned_cols=68 Identities=13% Similarity=0.022 Sum_probs=43.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC------CCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 6964107947889999872220895699998069555112220012332------321158975365788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL------IFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~------~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
+++|+=||.|.+...|- .. ....|.++|+++...+.-+.+.+... ..+|+.++...+ ..+|+++....
T Consensus 82 ~vLDiGcG~G~~~~~ll---~~-~~~~v~~vD~s~~~l~~ar~~~~~~~~~~v~~~~~d~~~l~~~~-~~fD~I~~~~v 155 (241)
T 2ex4_A 82 CALDCGAGIGRITKRLL---LP-LFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEP-DSYDVIWIQWV 155 (241)
T ss_dssp EEEEETCTTTHHHHHTT---TT-TCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCS-SCEEEEEEESC
T ss_pred EEEEECCCCCHHHHHHH---HC-CCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCC-CCCCEEEECCC
T ss_conf 69990157078699999---70-59989999999999999998776504663489957888715775-78318996465
No 99
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=90.96 E-value=0.74 Score=23.63 Aligned_cols=65 Identities=26% Similarity=0.445 Sum_probs=43.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-----CCCCCEEEEEECCCCCCCEEEEEC
Q ss_conf 69641079478899998722208956999980695551122200123-----323211589753657887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-----~~~~~DI~~~~~~~~~~~D~l~gG 73 (83)
||+|+=||.|.+...+.+. +.+ |.++|+++...+.-+.+... ..+.+|+.++...+ ..+|+++..
T Consensus 41 rVLDiGCG~G~~~~~la~~----~~~-v~g~D~s~~~l~~ak~~~~~~~~~~~~~~~d~~~l~~~~-~sfD~V~~~ 110 (227)
T 1ve3_A 41 KVLDLACGVGGFSFLLEDY----GFE-VVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFED-KTFDYVIFI 110 (227)
T ss_dssp EEEEETCTTSHHHHHHHHT----TCE-EEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCT-TCEEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHC----CCE-EEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CEEEEEEEE
T ss_conf 7999868888999999965----998-999967504689999988752765333346533488767-705899860
No 100
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.70A {Bacillus thuringiensis}
Probab=90.68 E-value=0.43 Score=24.80 Aligned_cols=68 Identities=16% Similarity=0.244 Sum_probs=44.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC---CCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 2696410794788999987222089569999806955511222001233---2321158975365788719998689
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~---~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
.||+|+=||.|.+...|.+. +.+ |.++|+++...+.-+.+.... ...+|+.+++..+ ..+|+++...-
T Consensus 55 ~~VLDiGcG~G~~~~~l~~~----~~~-v~giD~s~~~l~~a~~~~~~~~~~~~~~~~~~l~~~~-~~fD~i~~~~~ 125 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRT----GYK-AVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFEN-EQFEAIMAINS 125 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHT----TCE-EEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCT-TCEEEEEEESC
T ss_pred CEEEEECCCCCHHHHHHHHC----CCE-EEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCEEEEEEECH
T ss_conf 97999658885999999964----998-9999797466799875034442222234435678887-85689855002
No 101
>3ege_A Putative methyltransferase from antibiotic biosynthesis pathway; YP_324569.1, structural genomics; 2.40A {Anabaena variabilis atcc 29413}
Probab=90.43 E-value=0.31 Score=25.53 Aligned_cols=67 Identities=15% Similarity=0.160 Sum_probs=43.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 6964107947889999872220895699998069555112220012332321158975365788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
+|+|+=||.|.+...|... +.+ |.++|.++...+.-+.+-.-....+|..++...+ ..+|+++....
T Consensus 37 ~vLDvGcG~G~~~~~l~~~----~~~-v~gvD~s~~~~~~a~~~~~~~~~~~d~~~l~~~~-~~fD~v~~~~~ 103 (261)
T 3ege_A 37 VIADIGAGTGGYSVALANQ----GLF-VYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPD-KSVDGVISILA 103 (261)
T ss_dssp EEEEETCTTSHHHHHHHTT----TCE-EEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCT-TCBSEEEEESC
T ss_pred EEEEECCCCCHHHHHHHHC----CCE-EEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCC-CCCCEEEECCH
T ss_conf 9999648888999999976----998-9999744531210001221013334454302567-60137754012
No 102
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.30A {Bacillus cereus atcc 14579} PDB: 2gh1_A
Probab=90.31 E-value=0.74 Score=23.63 Aligned_cols=72 Identities=17% Similarity=0.186 Sum_probs=46.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC-----CCCCEEEEEECCCCCCCEEEEECCCC
Q ss_conf 2696410794788999987222089569999806955511222001233-----23211589753657887199986899
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDIAKIKTQDIPDHDVLLAGFPC 76 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~-----~~~~DI~~~~~~~~~~~D~l~gG~PC 76 (83)
.||+|+=||.|.+..-+..... .+. .|.++|+++...+.-+.++... .+.+|+.++... ..+|+++...-.
T Consensus 24 ~~ILDiGcG~G~~~~~la~~~~-~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~--~~fD~V~~~~~l 99 (284)
T 3gu3_A 24 VHIVDYGCGYGYLGLVLMPLLP-EGS-KYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN--DKYDIAICHAFL 99 (284)
T ss_dssp CEEEEETCTTTHHHHHHTTTSC-TTC-EEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS--SCEEEEEEESCG
T ss_pred CEEEEECCCCCHHHHHHHHHCC-CCC-EEEEECCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC--CCEEEEEEHHHH
T ss_conf 9799954879899999998577-998-899984989999999986664142001200111247989--975799886476
Q ss_pred C
Q ss_conf 7
Q gi|254780516|r 77 Q 77 (83)
Q Consensus 77 q 77 (83)
+
T Consensus 100 ~ 100 (284)
T 3gu3_A 100 L 100 (284)
T ss_dssp G
T ss_pred H
T ss_conf 5
No 103
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=90.04 E-value=0.59 Score=24.11 Aligned_cols=42 Identities=12% Similarity=0.160 Sum_probs=32.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC
Q ss_conf 696410794788999987222089569999806955511222001233
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~ 50 (83)
+|+|+=||.|.+.+.+. . +. .|.++|+++.+.+.-+.|....
T Consensus 108 ~VLDlGCG~G~l~~~~~--~---~~-~v~gvD~s~~~l~~ar~~~~~~ 149 (253)
T 3frh_A 108 RVLDIACGLNPLALYER--G---IA-SVWGCDIHQGLGDVITPFAREK 149 (253)
T ss_dssp EEEEETCTTTHHHHHHT--T---CS-EEEEEESBHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCHHHHHHC--C---CC-EEEEEECCHHHHHHHHHHHHHC
T ss_conf 59996788889999976--8---98-3899979799999999999982
No 104
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural genomics, NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus VF5}
Probab=89.99 E-value=0.3 Score=25.57 Aligned_cols=70 Identities=13% Similarity=0.061 Sum_probs=46.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC-------CCCCEEEEEECCCCCCCEEEEECC
Q ss_conf 2696410794788999987222089569999806955511222001233-------232115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~-------~~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
.||+|.-+|-|.+...|.+++ ..+...|+++...+.-+.|+... ...+|+.+....+ ..+|.++...
T Consensus 93 ~rVLEiGtGsG~lt~~La~~~-----g~v~t~e~~e~~~~~A~~n~~~~g~~~nv~~~~~D~~~~~~~~-~~fD~V~ld~ 166 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEVA-----GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPE-GIFHAAFVDV 166 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHHS-----SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCT-TCBSEEEECS
T ss_pred CEEEECCCCCHHHHHHHHHCC-----CEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCC-CCCCEEEEEC
T ss_conf 979973743119999998607-----8799982889999999998997005770599991222143245-8789999917
Q ss_pred CCC
Q ss_conf 997
Q gi|254780516|r 75 PCQ 77 (83)
Q Consensus 75 PCq 77 (83)
|..
T Consensus 167 p~p 169 (248)
T 2yvl_A 167 REP 169 (248)
T ss_dssp SCG
T ss_pred CCH
T ss_conf 876
No 105
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus HB8} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=89.88 E-value=0.29 Score=25.66 Aligned_cols=70 Identities=14% Similarity=0.231 Sum_probs=48.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC---CCCEEEEEECCCCCCCEEEEECCCCC
Q ss_conf 6964107947889999872220895699998069555112220012332---32115897536578871999868997
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---IFGDIAKIKTQDIPDHDVLLAGFPCQ 77 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~---~~~DI~~~~~~~~~~~D~l~gG~PCq 77 (83)
.|+|.=.|-|.++..|-.. + ..|.++|+|+...+.++.+++... +..|....+....++...++|-.|=+
T Consensus 49 ~VlEIGpG~G~LT~~L~~~----~-~~v~avE~D~~l~~~L~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vv~NLPY~ 121 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEA----G-AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGSLLVANLPYH 121 (271)
T ss_dssp CEEEECCTTSHHHHHHHHT----T-CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTEEEEEEECSS
T ss_pred CEEEECCCCCHHHHHHHHC----C-CCEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCHH
T ss_conf 8899679771999999960----8-96799983706788887543330103334655531033077642672365213
No 106
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=89.74 E-value=0.18 Score=26.73 Aligned_cols=66 Identities=17% Similarity=0.196 Sum_probs=42.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-----CCEEEEEECCCCCCCEEEEEC
Q ss_conf 69641079478899998722208956999980695551122200123323-----211589753657887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-----FGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-----~~DI~~~~~~~~~~~D~l~gG 73 (83)
+|+|+-||.|.+...+.... .+. .|.++|+++.+.+.-+.|.+.... ..|+.+.. ....+|+++..
T Consensus 135 ~vlD~GcG~G~~~~~l~~~~--~~~-~v~g~D~s~~~i~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~fD~v~~~ 205 (281)
T 3lcv_B 135 TLRDLACGLNPLAAPWMGLP--AET-VYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR--LDEPADVTLLL 205 (281)
T ss_dssp EEEETTCTTGGGCCTTTTCC--TTC-EEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC--CCSCCSEEEET
T ss_pred EEEEECCCCCHHHHHHHHHC--CCC-EEEEEECCHHHHHHHHHHHHHCCCCEEEEEECHHHHC--CCCCCCEEEEH
T ss_conf 69983898888999999749--977-4999659999999999999866887389981354407--65565677653
No 107
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; NP_988299.1, structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=89.45 E-value=0.5 Score=24.49 Aligned_cols=68 Identities=15% Similarity=0.258 Sum_probs=43.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-------CCCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 69641079478899998722208956999980695551122200123-------32321158975365788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-------~~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
+|||+=||.|.....|.+. .+. .+.++|+++...+.-+.+.+. +.+.+|+.++...+ ..+|+++....
T Consensus 46 ~VLDiGcG~G~~~~~la~~---~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~fD~V~~~~~ 120 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ---SDF-SIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIED-NYADLIVSRGS 120 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH---SEE-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCT-TCEEEEEEESC
T ss_pred EEEEECCCCCHHHHHHHHH---CCC-EEEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCC-CCCCEEEECCH
T ss_conf 3999627585999999953---699-899997978999999874442166664000136533567544-55529998441
No 108
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=89.45 E-value=0.36 Score=25.21 Aligned_cols=67 Identities=13% Similarity=0.310 Sum_probs=47.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-CCCEEEEEECCCCCCCEEEEEC
Q ss_conf 6964107947889999872220895699998069555112220012332-3211589753657887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-~~~DI~~~~~~~~~~~D~l~gG 73 (83)
+++|+=||-|.+...+.+.+. +. .+..+|+++.+.+.-+.+.++.. ..+|++++...+ ..+|+++.-
T Consensus 88 ~vLDiGcG~G~~~~~l~~~~~--~~-~~~gvD~s~~~l~~a~~~~~~~~~~~~d~~~lp~~d-~sfD~v~~~ 155 (269)
T 1p91_A 88 AVLDIGCGEGYYTHAFADALP--EI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSD-TSMDAIIRI 155 (269)
T ss_dssp EEEEETCTTSTTHHHHHHTCT--TS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCT-TCEEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHHCC--CC-EEEEEECCHHHHHHHHHCCCCCCCEECCHHHCCCCC-CCEEEEECC
T ss_conf 699968989699999998689--96-899997958899999851775430002342167899-857787420
No 109
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxylating); porphyrin metabolism, S-adenosyl-methionine, structural genomics; 1.80A {Geobacter metallireducens gs-15}
Probab=89.44 E-value=0.47 Score=24.60 Aligned_cols=44 Identities=16% Similarity=0.222 Sum_probs=34.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC
Q ss_conf 69641079478899998722208956999980695551122200123
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~ 49 (83)
+|+|+-||.|.+++.+.+.. .--.|+++|+++.+.+.-+.|...
T Consensus 43 ~VLDiG~GsG~la~~~a~~~---~~~~V~aiD~~~~~~~~a~~n~~~ 86 (204)
T 3e05_A 43 VMWDIGAGSASVSIEASNLM---PNGRIFALERNPQYLGFIRDNLKK 86 (204)
T ss_dssp EEEEETCTTCHHHHHHHHHC---TTSEEEEEECCHHHHHHHHHHHHH
T ss_pred EEEEEEEEHHHHHHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHH
T ss_conf 99998310789999999978---996799994999999999999998
No 110
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=89.38 E-value=0.77 Score=23.55 Aligned_cols=65 Identities=14% Similarity=0.057 Sum_probs=40.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-----CCCCCEEEEEECCCCCCCEEEEEC
Q ss_conf 69641079478899998722208956999980695551122200123-----323211589753657887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-----~~~~~DI~~~~~~~~~~~D~l~gG 73 (83)
||+|+-||.|....-|.+. +++ |.++|+++.+.+.-+.+.+. ..+..|+.+++... ..+|+++..
T Consensus 32 ~vLDlGcG~G~~~~~la~~----G~~-V~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~~d~~~~~ 101 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL----GYE-VTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVA-DAWEGIVSI 101 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT----TCE-EEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCT-TTCSEEEEE
T ss_pred CEEEECCCCCHHHHHHHHC----CCC-EEEEECCHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCC-CCEEEEEEE
T ss_conf 3999837789999999986----991-467777899999999988871995589982263389988-959998515
No 111
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genomics, JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=89.25 E-value=0.35 Score=25.24 Aligned_cols=42 Identities=21% Similarity=0.240 Sum_probs=32.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC
Q ss_conf 69641079478899998722208956999980695551122200123
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~ 49 (83)
||+|+=||.|.+...|... +.+ |..+|+++...+.-+.+...
T Consensus 55 ~vLDiGcG~G~~~~~l~~~----g~~-v~gvD~S~~~i~~A~~~~~~ 96 (227)
T 3e8s_A 55 RVLDLGCGEGWLLRALADR----GIE-AVGVDGDRTLVDAARAAGAG 96 (227)
T ss_dssp EEEEETCTTCHHHHHHHTT----TCE-EEEEESCHHHHHHHHHTCSS
T ss_pred EEEEECCCCCHHHHHHHHC----CCE-EEEECCCHHHHHHHHHHCCC
T ss_conf 8999768983999999976----996-99986817889999986014
No 112
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=89.09 E-value=0.9 Score=23.19 Aligned_cols=75 Identities=17% Similarity=0.221 Sum_probs=45.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC---CCCCCEEEEEE-------CCCCCCCEEEE
Q ss_conf 269641079478899998722208956999980695551122200123---32321158975-------36578871999
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAKIK-------TQDIPDHDVLL 71 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~---~~~~~DI~~~~-------~~~~~~~D~l~ 71 (83)
.+|+|-+||.|||=..+.+...+..-..++-.|+++.+...-+.|.-- ......|..-+ ..+..++|+++
T Consensus 223 ~~I~DPacGsGgfL~~a~~~~~~~~~~~~~G~e~~~~~~~la~~nl~l~g~~~~~~~i~~~d~l~~~~~~~~~~~fD~Il 302 (542)
T 3lkd_A 223 FTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVL 302 (542)
T ss_dssp CEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSEEE
T ss_pred CEEECCCCCCCHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCEEEEE
T ss_conf 86832778845588988887750055578744266799999999878724654222032056544444323232000356
Q ss_pred ECCCC
Q ss_conf 86899
Q gi|254780516|r 72 AGFPC 76 (83)
Q Consensus 72 gG~PC 76 (83)
+-||=
T Consensus 303 ~NPPf 307 (542)
T 3lkd_A 303 MNPPY 307 (542)
T ss_dssp ECCCT
T ss_pred ECCCC
T ss_conf 34886
No 113
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA; HET: SAH; 2.60A {Thermus thermophilus HB8}
Probab=88.93 E-value=0.46 Score=24.66 Aligned_cols=68 Identities=12% Similarity=-0.025 Sum_probs=45.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-CCCEEEEEECCCCCCCEEEEECCCCC
Q ss_conf 26964107947889999872220895699998069555112220012332-32115897536578871999868997
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIPDHDVLLAGFPCQ 77 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-~~~DI~~~~~~~~~~~D~l~gG~PCq 77 (83)
.+++|+=||.|.+...+ + + ..|.++|+++...+.-+.+.++.. +..|++++...+ ..+|+++...--+
T Consensus 38 ~~iLDiGCG~G~~~~~l--~----~-~~v~g~D~s~~~l~~A~~~~~~~~~~~~~~~~l~~~~-~~fD~V~~~~~l~ 106 (211)
T 2gs9_A 38 ESLLEVGAGTGYWLRRL--P----Y-PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPG-ESFDVVLLFTTLE 106 (211)
T ss_dssp SEEEEETCTTCHHHHHC--C----C-SEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCS-SCEEEEEEESCTT
T ss_pred CEEEEECCCCHHHHHHC--C----C-CCEEEEECCHHHHHHHHHCCCCCEEEECCHHCCCCCC-CCCCHHHHHHHHH
T ss_conf 98999899860999973--7----6-8689983899999987633665203434231178875-6422798754787
No 114
>1vl5_A Unknown conserved protein BH2331; 10174951, hypothetical protein, structural genomics, JCSG, protein structure initiative, PSI; HET: MSE; 1.95A {Bacillus halodurans c-125} SCOP: c.66.1.41
Probab=88.87 E-value=0.58 Score=24.15 Aligned_cols=66 Identities=12% Similarity=0.160 Sum_probs=43.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCC-----CC-CCCCCEEEEEECCCCCCCEEEEEC
Q ss_conf 2696410794788999987222089569999806955511222001-----23-323211589753657887199986
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PN-TLIFGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~-----~~-~~~~~DI~~~~~~~~~~~D~l~gG 73 (83)
.||+|+=||.|.+...+.+. +.+ |.++|+++...+.-+.+. ++ ..+.+|..++...+ ..+|+++..
T Consensus 39 ~~VLDiGcG~G~~~~~la~~----~~~-v~g~D~s~~~~~~a~~~~~~~g~~~i~~~~~d~~~l~~~~-~sfD~V~~~ 110 (260)
T 1vl5_A 39 EEVLDVATGGGHVANAFAPF----VKK-VVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTD-ERFHIVTCR 110 (260)
T ss_dssp CEEEEETCTTCHHHHHHGGG----SSE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCT-TCEEEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHH----CCE-EEEEECCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCC-CCEEEEEEE
T ss_conf 99999546471999999972----996-9999899999998661222245665247751123578777-855799870
No 115
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} SCOP: c.66.1.16 PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=88.45 E-value=0.92 Score=23.16 Aligned_cols=46 Identities=9% Similarity=0.091 Sum_probs=35.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC
Q ss_conf 26964107947889999872220895699998069555112220012332
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL 51 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~ 51 (83)
.||||+=||.|.....+.+. +...+..+|+++...+..+.++....
T Consensus 62 ~rVLeiG~G~G~~a~~la~~----~~~~vt~id~s~~~l~~a~~~~~~~~ 107 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEA----PIDEHWIIECNDGVFQRLRDWAPRQT 107 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTS----CEEEEEEEECCHHHHHHHHHHGGGCS
T ss_pred CEEEEECCCCCHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHHHCC
T ss_conf 84999888850999999972----99779998089899999999887558
No 116
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus HB8} PDB: 2yr0_A
Probab=88.43 E-value=1.2 Score=22.57 Aligned_cols=67 Identities=13% Similarity=0.185 Sum_probs=42.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-----CCCEEEEEECCCCCCCEEEEECC
Q ss_conf 26964107947889999872220895699998069555112220012332-----32115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-----IFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-----~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
-||||+=||.|.+...+... +.+ |.++|+++...+.-+.+.+... ..+|..++...+ ..+|+++...
T Consensus 41 ~~vLDiGcG~G~~t~~la~~----~~~-V~gvD~S~~~l~~a~~r~~~~~~~v~~~~~da~~l~~~~-~sfD~V~~~~ 112 (263)
T 2yqz_A 41 PVFLELGVGTGRIALPLIAR----GYR-YIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPD-ESVHGVIVVH 112 (263)
T ss_dssp CEEEEETCTTSTTHHHHHTT----TCE-EEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCT-TCEEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHC----CCE-EEEEECCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCC-CCCCEEEECC
T ss_conf 98999517886999999966----998-999989899999987402101144102220122234667-6104787512
No 117
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomics, JCSG, PSI, protein structure initiative; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=88.37 E-value=1.2 Score=22.55 Aligned_cols=72 Identities=22% Similarity=0.154 Sum_probs=46.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-------CCCEEEEEECCCCCCCEEEEECC
Q ss_conf 26964107947889999872220895699998069555112220012332-------32115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-------~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
.||+|+-+|-|+++..+-++.... -.|.++|+++...+.-+.|+.... ..+|+.+.. ....+|.++-..
T Consensus 114 ~~VLDiG~GsG~lt~~lA~~v~~~--g~V~~~D~~~~~~~~A~~n~~~~gl~~~v~~~~~D~~~~~--~~~~~D~V~ld~ 189 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSS--GKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF--DEKDVDALFLDV 189 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTT--CEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC--SCCSEEEEEECC
T ss_pred CEEEECCCCCHHHHHHHHHHCCCC--EEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC--CCCCCCEEECCC
T ss_conf 989976888279999999851898--0999996889999999998997499876799968622444--444541022178
Q ss_pred CCC
Q ss_conf 997
Q gi|254780516|r 75 PCQ 77 (83)
Q Consensus 75 PCq 77 (83)
|..
T Consensus 190 p~p 192 (277)
T 1o54_A 190 PDP 192 (277)
T ss_dssp SCG
T ss_pred CCH
T ss_conf 998
No 118
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=88.24 E-value=0.67 Score=23.83 Aligned_cols=73 Identities=14% Similarity=0.080 Sum_probs=46.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC----CCCCCEEEEEECCC--CCCCEEEEECCC
Q ss_conf 269641079478899998722208956999980695551122200123----32321158975365--788719998689
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAKIKTQD--IPDHDVLLAGFP 75 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~----~~~~~DI~~~~~~~--~~~~D~l~gG~P 75 (83)
.||+||-||.|....-+...... + -.|.++|+++...+..+.+... .++..|.++..... ...+|.++...+
T Consensus 79 ~~VLDlG~G~G~~~~~la~~vg~-~-G~V~aVD~s~~~l~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~i~~~~~ 156 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGP-D-GLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA 156 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCT-T-CEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC
T ss_pred CEEEEECCCCCHHHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCHHCCCCCCEEEEEECCCC
T ss_conf 99999657689899999998599-9-679999799999999999755146664289753670111566526888531422
Q ss_pred C
Q ss_conf 9
Q gi|254780516|r 76 C 76 (83)
Q Consensus 76 C 76 (83)
.
T Consensus 157 ~ 157 (233)
T 2ipx_A 157 Q 157 (233)
T ss_dssp C
T ss_pred C
T ss_conf 6
No 119
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=88.17 E-value=0.55 Score=24.29 Aligned_cols=69 Identities=13% Similarity=0.087 Sum_probs=43.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC------CCCCEEEEEECCCCCCCEEEEEC
Q ss_conf 2696410794788999987222089569999806955511222001233------23211589753657887199986
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~------~~~~DI~~~~~~~~~~~D~l~gG 73 (83)
.||+|+-+|.|.+..-+.+.... -..|.++|+++...+.-+.|.... .+.+|..+...++ ..+|.|+..
T Consensus 77 ~~VLeIGtGtGy~aa~la~~~~~--~~~V~~iE~~~~l~~~A~~~l~~~g~~nv~~~~gD~~~g~~~~-~~fD~Iiv~ 151 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVGE--KGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEF-SPYDVIFVT 151 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCT--TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG-CCEEEEEEC
T ss_pred CEEEEECCCCCHHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCC-CCCCEEEEC
T ss_conf 98999179764768999886188--8679999578178999999899735787399989557588778-994199996
No 120
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=87.94 E-value=0.47 Score=24.61 Aligned_cols=64 Identities=11% Similarity=0.099 Sum_probs=43.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC--CCCCEEEEEECCCCCCCEEEEEC
Q ss_conf 696410794788999987222089569999806955511222001233--23211589753657887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~--~~~~DI~~~~~~~~~~~D~l~gG 73 (83)
+|+|+=||.|.+...+... +.+ +..+|+++.+.+..+.+++.. .+.+|+.+.... .++|+++..
T Consensus 45 ~VLDiGCG~G~~~~~l~~~----~~~-v~giD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~--~~fD~I~~~ 110 (250)
T 2p7i_A 45 NLLELGSFKGDFTSRLQEH----FND-ITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLP--RRYDNIVLT 110 (250)
T ss_dssp CEEEESCTTSHHHHHHTTT----CSC-EEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCS--SCEEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHH----CCE-EEEEECCHHHHHHHHHHHHCCCCEEECCHHHCCCC--CCCCHHHHH
T ss_conf 3999928987999999950----997-99996716888899986303542020222212665--566578864
No 121
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=87.91 E-value=0.62 Score=24.02 Aligned_cols=66 Identities=24% Similarity=0.244 Sum_probs=40.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-------CCCCCEEEEEECCCCCCCEEEEE
Q ss_conf 269641079478899998722208956999980695551122200123-------32321158975365788719998
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDIAKIKTQDIPDHDVLLA 72 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-------~~~~~DI~~~~~~~~~~~D~l~g 72 (83)
.||||+=||.|++...+.+. .+.+ |..+|+++...+.-+.+.+. ....+|..++...+ ..+|+++.
T Consensus 84 ~~VLDiGCG~G~~~~~la~~---~g~~-v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~~~-~~fD~V~~ 156 (297)
T 2o57_A 84 AKGLDLGAGYGGAARFLVRK---FGVS-IDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCED-NSYDFIWS 156 (297)
T ss_dssp CEEEEETCTTSHHHHHHHHH---HCCE-EEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCT-TCEEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHH---CCCE-EEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCC-CCEEEEEE
T ss_conf 98999889999899999996---3985-99996742778888764432056766227861222567666-51109998
No 122
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; reductive methylation, structural genomics, PSI 2, protein structure initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=87.75 E-value=0.63 Score=23.98 Aligned_cols=72 Identities=15% Similarity=0.232 Sum_probs=47.1
Q ss_pred CCEEEEECCCCCHHHHHHHHHHH-CCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCCC
Q ss_conf 92696410794788999987222-089569999806955511222001233232115897536578871999868997
Q gi|254780516|r 1 MLKITDLFCGIGGIRLDLEQTFN-HRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQ 77 (83)
Q Consensus 1 ml~v~~LFsG~GG~~~gl~~a~~-~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~PCq 77 (83)
|||+.= -|+|.+....-.+.. ..+++++..+|.++...+.+...|+....+.+...+.. +++|+++=..|-+
T Consensus 1 m~kigi--IG~G~~~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~e~l~~---~~iD~V~I~tp~~ 73 (325)
T 2ho3_A 1 MLKLGV--IGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFK---SSFDLVYIASPNS 73 (325)
T ss_dssp CEEEEE--ECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHT---SSCSEEEECSCGG
T ss_pred CCEEEE--ECCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHC---CCCCEEEEECCCC
T ss_conf 959999--998399999999998688908999988999999999998499835685999718---9998999958960
No 123
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45
Probab=87.66 E-value=0.34 Score=25.33 Aligned_cols=74 Identities=15% Similarity=0.302 Sum_probs=43.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCC---------------CEEEEEEECCHHHHHHHHHCC-----CCCCCCCEEEEEE--
Q ss_conf 696410794788999987222089---------------569999806955511222001-----2332321158975--
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRN---------------VECFFSSEINPYSVKTYQANF-----PNTLIFGDIAKIK-- 60 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~---------------~~~v~a~e~d~~a~~~y~~n~-----~~~~~~~DI~~~~-- 60 (83)
+|+|-+||.|||-....+...... ...++..|+++.+...-+.|. +.....++.....
T Consensus 172 ~I~DPacGsG~fL~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~G~E~~~~~~~la~~nl~l~g~~~~~~~~~~~~~~~~ 251 (541)
T 2ar0_A 172 VVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNT 251 (541)
T ss_dssp CEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESCT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCC
T ss_conf 30465778560579999999984366211104678888876663020669999999864663456301134750210450
Q ss_pred ----CCCCCCCEEEEECCCC
Q ss_conf ----3657887199986899
Q gi|254780516|r 61 ----TQDIPDHDVLLAGFPC 76 (83)
Q Consensus 61 ----~~~~~~~D~l~gG~PC 76 (83)
....+++|++++=||=
T Consensus 252 l~~d~~~~~~fD~Vl~NPPf 271 (541)
T 2ar0_A 252 LGSDGENLPKAHIVATNPPF 271 (541)
T ss_dssp TSHHHHTSCCEEEEEECCCC
T ss_pred HHHCCCCCCCCCEEEECCCC
T ss_conf 43304444346668736997
No 124
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=87.43 E-value=0.74 Score=23.63 Aligned_cols=66 Identities=12% Similarity=0.099 Sum_probs=42.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC----CCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 6964107947889999872220895699998069555112220012332----321158975365788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL----IFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~----~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
+|+|+=||.|-+...|... + ..|.++|+++.+.+.-+.+.+... ..+|+.+.... ..+|+++....
T Consensus 54 ~vLDvGcG~G~~~~~la~~----~-~~v~gvD~s~~~l~~a~~~~~~~~~i~~~~~d~~~~~~~--~~fD~V~~~~v 123 (216)
T 3ofk_A 54 NGLEIGCAAGAFTEKLAPH----C-KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTA--ELFDLIVVAEV 123 (216)
T ss_dssp EEEEECCTTSHHHHHHGGG----E-EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCS--CCEEEEEEESC
T ss_pred EEEEEECCCCHHHHHHHHH----C-CEEEEEECCHHHHHHHHHHHCCCCEEECCCCCHHHHCCC--CCCCEEEECCC
T ss_conf 0999638898999999970----9-989999699899999998615462231010202232357--87148998455
No 125
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=87.17 E-value=0.53 Score=24.34 Aligned_cols=70 Identities=24% Similarity=0.367 Sum_probs=43.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-------------CCCCCEEEEEEC-CCCC--
Q ss_conf 269641079478899998722208956999980695551122200123-------------323211589753-6578--
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------------TLIFGDIAKIKT-QDIP-- 65 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-------------~~~~~DI~~~~~-~~~~-- 65 (83)
.+||||-||-||.-.-+..+ ++..+...|+++.+.+.-+.++.. ..+.+|+.+... +.++
T Consensus 36 ~~VLDlGCG~G~dl~k~~~~----~~~~v~GiDis~~~i~~A~~r~~~~~~~~~~~~~~~~~f~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 36 ITVLDLGCGKGGDLLKWKKG----RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp CEEEEETCTTTTTHHHHHHT----TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CEEEEEECCCCHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHCHHHHHCCCC
T ss_conf 97999734776889999965----99979999599999999999988543222223577638996563212013314676
Q ss_pred --CCEEEEECCC
Q ss_conf --8719998689
Q gi|254780516|r 66 --DHDVLLAGFP 75 (83)
Q Consensus 66 --~~D~l~gG~P 75 (83)
.+|+++.-+-
T Consensus 112 ~~~FD~I~~~f~ 123 (313)
T 3bgv_A 112 QMCFDICSCQFV 123 (313)
T ss_dssp TCCEEEEEEETC
T ss_pred CCCCEEEEECCC
T ss_conf 776108996564
No 126
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=86.88 E-value=0.78 Score=23.51 Aligned_cols=66 Identities=23% Similarity=0.460 Sum_probs=45.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-CCCEEEEEECCCCCCCEEEEECC
Q ss_conf 6964107947889999872220895699998069555112220012332-32115897536578871999868
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
+++|+=||-|.+...+.+. +++ |.++|+++.+.+.-+.|+++.. ..+|+......+ ..+|+++.-.
T Consensus 49 ~vLDlGCG~G~~~~~l~~~----~~~-v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~~~~-~~fD~v~~~~ 115 (195)
T 3cgg_A 49 KILDAGCGQGRIGGYLSKQ----GHD-VLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISE-TDFDLIVSAG 115 (195)
T ss_dssp EEEEETCTTTHHHHHHHHT----TCE-EEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCC-CCEEEEEECC
T ss_pred EEEEECCCCCHHHHHHHHC----CCE-EEEEECCHHHHHHHHHHCCCCCEEECCCCCCCCCC-CCCCEEEECC
T ss_conf 8999768885999999976----998-99997972778999973025431102433565666-5325899823
No 127
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=86.46 E-value=1.1 Score=22.75 Aligned_cols=69 Identities=10% Similarity=-0.018 Sum_probs=45.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC-CC-CCCCEEEEEECCCCCCCEEEEECCCCCC
Q ss_conf 6964107947889999872220895699998069555112220012-33-2321158975365788719998689975
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NT-LIFGDIAKIKTQDIPDHDVLLAGFPCQP 78 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~-~~-~~~~DI~~~~~~~~~~~D~l~gG~PCq~ 78 (83)
||+|+=||.|-+..-|... +. .|.++|+++...+.-+.+.. +. ...+|+.++... ..+|+++...-.+-
T Consensus 49 ~vLDvGcG~G~~~~~la~~----g~-~v~gvD~S~~~l~~a~~~~~~~v~~~~~d~~~~~~~--~~fD~V~~~~~l~h 119 (218)
T 3ou2_A 49 DVLELASGTGYWTRHLSGL----AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPD--RQWDAVFFAHWLAH 119 (218)
T ss_dssp EEEEESCTTSHHHHHHHHH----SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCS--SCEEEEEEESCGGG
T ss_pred CEEEECCCCCHHHHHHHHC----CC-EEEEEECCCHHHHHHHHHHCCCEEECCCHHHCCCCC--CCCEEEEEEEEHHH
T ss_conf 7999889887899999961----99-899997831789999973055111001101012568--87328997212664
No 128
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=86.46 E-value=1 Score=22.87 Aligned_cols=65 Identities=15% Similarity=0.126 Sum_probs=42.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECC
Q ss_conf 696410794788999987222089569999806955511222001233232115897536578871999868
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
||||+=||-|.+..-|... +++ |.++|+++.+.+.-+.+........+..+++. ...+|+++...
T Consensus 46 ~VLDvGCG~G~~~~~l~~~----g~~-v~gvD~s~~~i~~a~~~~~~~~~~~~~~~~~~--~~~fD~I~~~~ 110 (211)
T 3e23_A 46 KILELGCGAGYQAEAMLAA----GFD-VDATDGSPELAAEASRRLGRPVRTMLFHQLDA--IDAYDAVWAHA 110 (211)
T ss_dssp EEEESSCTTSHHHHHHHHT----TCE-EEEEESCHHHHHHHHHHHTSCCEECCGGGCCC--CSCEEEEEECS
T ss_pred EEEEECCCCCHHHHHHHHC----CCC-EEEEECCHHHHHHHHHHCCCCCEEEEEECCCC--CCCCCHHHHHH
T ss_conf 8999868886999999975----992-32341469999999986088620112202553--22331365443
No 129
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, PSI, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=86.14 E-value=0.95 Score=23.09 Aligned_cols=72 Identities=17% Similarity=0.198 Sum_probs=45.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC---------CCCCCEEEEEECCCCCCCEEEEE
Q ss_conf 269641079478899998722208956999980695551122200123---------32321158975365788719998
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---------TLIFGDIAKIKTQDIPDHDVLLA 72 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~---------~~~~~DI~~~~~~~~~~~D~l~g 72 (83)
.||+|.=+|-|.+++.|-++.... -.|+..|+++...+.-+.|+.. ....+|+.+....+ ..+|.++-
T Consensus 101 ~~VLE~GtGsG~lT~~LAr~vgp~--G~V~t~D~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~~~~~~-~~fD~Vfl 177 (280)
T 1i9g_A 101 ARVLEAGAGSGALTLSLLRAVGPA--GQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPD-GSVDRAVL 177 (280)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCT-TCEEEEEE
T ss_pred CEEEEEEECCHHHHHHHHHHHCCC--EEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC-CCCCEEEE
T ss_conf 989992276159999999974998--599999589999999998555431578862999955512255667-88786897
Q ss_pred CCCC
Q ss_conf 6899
Q gi|254780516|r 73 GFPC 76 (83)
Q Consensus 73 G~PC 76 (83)
.-|-
T Consensus 178 Dlp~ 181 (280)
T 1i9g_A 178 DMLA 181 (280)
T ss_dssp ESSC
T ss_pred CCCC
T ss_conf 2788
No 130
>2i6g_A Putative methyltransferase; 16420133, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MLY; 1.90A {Salmonella typhimurium LT2} SCOP: c.66.1.44
Probab=86.09 E-value=1.7 Score=21.84 Aligned_cols=68 Identities=21% Similarity=0.278 Sum_probs=43.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC---CCCEEEEEECCCC-CCCEEEEECCC
Q ss_conf 6964107947889999872220895699998069555112220012332---3211589753657-88719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---IFGDIAKIKTQDI-PDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~---~~~DI~~~~~~~~-~~~D~l~gG~P 75 (83)
||+|+=||.|.....|... +++ |.++|+++.+.+..+.+.+... +..++.++....+ +.+|+++....
T Consensus 34 rVLDiGcG~G~~~~~la~~----g~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~fD~V~~~~~ 105 (199)
T 2i6g_A 34 RTLDLGCGNGRNSLYLAAN----GYD-VTAWDXNPASMANLERIXAAEGLDNLQTDLVDLNTLTFDGEYDFILSTVV 105 (199)
T ss_dssp EEEEETCTTSHHHHHHHHT----TCE-EEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCCCCCEEEEEEESC
T ss_pred CEEEECCCCCHHHHHHHHC----CCE-EEEEECCCHHHHHHHHHHHHCCCCCHHHHHEECCCCCCCCCEEEEEECCC
T ss_conf 6899858897899999854----998-99995871899999986421376410010000002466875319998121
No 131
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=85.81 E-value=0.43 Score=24.79 Aligned_cols=65 Identities=18% Similarity=0.261 Sum_probs=44.5
Q ss_pred CCCHHH-HHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEE-EECCCC
Q ss_conf 947889-9998722208956999980695551122200123323211589753657887199-986899
Q gi|254780516|r 10 GIGGIR-LDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVL-LAGFPC 76 (83)
Q Consensus 10 G~GG~~-~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l-~gG~PC 76 (83)
|+|..+ .++.....+.+++.++.+|.++...+.+...|+....+.|+.++-.. +++|++ ++.||-
T Consensus 11 G~g~~~~~~~~~~~~~~~~elvav~d~~~~~~~~~~~~~~~~~~~~~~~ell~~--~~iDaV~I~tp~~ 77 (336)
T 2p2s_A 11 GLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITD--ASIDLIACAVIPC 77 (336)
T ss_dssp CCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTC--TTCCEEEECSCGG
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCEECCHHHHHCC--CCCCEEEEECCHH
T ss_conf 368899999998865089789999899999999999877998378999999559--9989999968827
No 132
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=85.81 E-value=1.2 Score=22.59 Aligned_cols=44 Identities=16% Similarity=0.274 Sum_probs=33.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC
Q ss_conf 6964107947889999872220895699998069555112220012332
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL 51 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~ 51 (83)
.|+|.|+|-|.-.++.+++ +-+.+ .+|+++...++-+.++..+.
T Consensus 238 ~VlDpF~GSGTT~~aa~~l----~R~~I-g~E~~~~y~~~a~~Rl~~~~ 281 (297)
T 2zig_A 238 VVLDPFAGTGTTLIAAARW----GRRAL-GVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp EEEETTCTTTHHHHHHHHT----TCEEE-EEESCHHHHHHHHHHHHHHS
T ss_pred EEEECCCCCHHHHHHHHHC----CCEEE-EEECCHHHHHHHHHHHHHHC
T ss_conf 9998999955999999980----99599-99779999999999999865
No 133
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=85.66 E-value=1.8 Score=21.73 Aligned_cols=65 Identities=22% Similarity=0.379 Sum_probs=46.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-------CCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 6964107947889999872220895699998069555112220012332-------321158975365788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-------~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
+|+|.=.|.|.++..|-..+ +.+.++|+|+...+.++..++... +++|+.+++ ++....++|-.|
T Consensus 31 ~VlEIGPG~G~LT~~Ll~~~-----~~v~aiE~D~~l~~~L~~~~~~~~~~~~~~ii~~D~l~~d---~~~~~~vVgNLP 102 (285)
T 1zq9_A 31 VVLEVGPGTGNMTVKLLEKA-----KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD---LPFFDTCVANLP 102 (285)
T ss_dssp EEEEECCTTSTTHHHHHHHS-----SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC---CCCCSEEEEECC
T ss_pred EEEEECCCCHHHHHHHHHCC-----CCEEEEEECHHHHHHHHHHHHCCCCCCCEEEECHHHHHCH---HHHHHHEECCCH
T ss_conf 79996897219999998049-----9669999878999999987620121003445406654110---554432110221
No 134
>1qyr_A KSGA, high level kasugamycin resistance protein, S-; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24
Probab=85.56 E-value=0.33 Score=25.37 Aligned_cols=68 Identities=9% Similarity=0.103 Sum_probs=48.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC---C-CCCCCEEEEEECCCC----CCCEEEEECC
Q ss_conf 6964107947889999872220895699998069555112220012---3-323211589753657----8871999868
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---N-TLIFGDIAKIKTQDI----PDHDVLLAGF 74 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~---~-~~~~~DI~~~~~~~~----~~~D~l~gG~ 74 (83)
+|+|.=.|-|.++..|-+. + ..+.++|+|+...+.++.++. + ..+++|+.+++..++ ++--.++|-.
T Consensus 24 ~vlEIGpG~G~LT~~Ll~~----~-~~v~avE~D~~l~~~L~~~~~~~~~~~ii~~D~l~~~~~~~~~~~~~~~~vvgNL 98 (252)
T 1qyr_A 24 AMVEIGPGLAALTEPVGER----L-DQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNL 98 (252)
T ss_dssp CEEEECCTTTTTHHHHHTT----C-SCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHTSCEEEEEEC
T ss_pred EEEEECCCCCHHHHHHHHC----C-CCEEEEEECCHHHHHHHHHHHCCCCEEEEECHHHHHCHHHHHCCCCCCEEEEECC
T ss_conf 6999899872999999816----8-9769999621288999987631776256501145523212210368975999466
Q ss_pred C
Q ss_conf 9
Q gi|254780516|r 75 P 75 (83)
Q Consensus 75 P 75 (83)
|
T Consensus 99 P 99 (252)
T 1qyr_A 99 P 99 (252)
T ss_dssp C
T ss_pred H
T ss_conf 2
No 135
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=85.04 E-value=0.99 Score=23.01 Aligned_cols=75 Identities=15% Similarity=0.298 Sum_probs=48.0
Q ss_pred CCEEEEECCCCCHHH-HHHHHH-HHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEE-EECCCCC
Q ss_conf 926964107947889-999872-2208956999980695551122200123323211589753657887199-9868997
Q gi|254780516|r 1 MLKITDLFCGIGGIR-LDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVL-LAGFPCQ 77 (83)
Q Consensus 1 ml~v~~LFsG~GG~~-~gl~~a-~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l-~gG~PCq 77 (83)
|||+. .-|+|.+. ...-.+ ....+++.++.+|.++...+..+..++....+.|+.++-.+ +++|.+ ++.||+.
T Consensus 5 ~irig--iiG~G~~~~~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~--~~iD~V~I~tp~~~ 80 (359)
T 3m2t_A 5 LIKVG--LVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQ--VPLDAVVMAGPPQL 80 (359)
T ss_dssp CEEEE--EECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHH--SCCSEEEECSCHHH
T ss_pred CCEEE--EECCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCEECCHHHHHCC--CCCCEEEECCCHHH
T ss_conf 62899--991719999999999983999589999889999999999884998531899999659--99998998786354
Q ss_pred CC
Q ss_conf 54
Q gi|254780516|r 78 PF 79 (83)
Q Consensus 78 ~f 79 (83)
-+
T Consensus 81 H~ 82 (359)
T 3m2t_A 81 HF 82 (359)
T ss_dssp HH
T ss_pred HH
T ss_conf 35
No 136
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=84.68 E-value=1.1 Score=22.78 Aligned_cols=43 Identities=16% Similarity=0.186 Sum_probs=31.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC
Q ss_conf 696410794788999987222089569999806955511222001233
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~ 50 (83)
.|+|.|+|-|...++.++.+ -+ ...+|+++..+++-+.+..+.
T Consensus 215 ~VlDpF~GSGtT~~aa~~~~----R~-~ig~E~~~~y~~~a~~Rl~~~ 257 (260)
T 1g60_A 215 LVLDCFMGSGTTAIVAKKLG----RN-FIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp EEEESSCTTCHHHHHHHHTT----CE-EEEEESCHHHHHHHHHHHHC-
T ss_pred EEEECCCCCHHHHHHHHHCC----CE-EEEEECCHHHHHHHHHHHHHH
T ss_conf 89989998319999999809----94-999967999999999999985
No 137
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=84.32 E-value=2.1 Score=21.40 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=33.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC
Q ss_conf 269641079478899998722208956999980695551122200123
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~ 49 (83)
.||+|+=||.|.+...|.+.+ ....|..+|+++...+.-+.+++.
T Consensus 31 ~rVLDvGcG~G~~~~~l~~~~---~~~~v~gvD~s~~~l~~A~~~~~~ 75 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDS---FFEQITGVDVSYRSLEIAQERLDR 75 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCT---TCSEEEEEESCHHHHHHHHHHHTT
T ss_pred CEEEEEECCCCHHHHHHHHHC---CCCEEECCCCCHHHHHHHHHHHHH
T ss_conf 989998188879999999847---652252103899999999998876
No 138
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, DNA binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=84.24 E-value=0.89 Score=23.22 Aligned_cols=43 Identities=19% Similarity=0.234 Sum_probs=33.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC
Q ss_conf 696410794788999987222089569999806955511222001233
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~ 50 (83)
.|+|.|+|-|....+.+++ +-+.+ .+|+++...++.+.+....
T Consensus 245 iVLDpF~GSGTT~~AA~~l----gR~~I-G~Ei~~~y~~ia~~Ri~~~ 287 (319)
T 1eg2_A 245 TVLDFFAGSGVTARVAIQE----GRNSI-CTDAAPVFKEYYQKQLTFL 287 (319)
T ss_dssp EEEETTCTTCHHHHHHHHH----TCEEE-EEESSTHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHC----CCEEE-EEECCHHHHHHHHHHHHHH
T ss_conf 9998799884899999981----99399-9948999999999999975
No 139
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1, methyltransferase domain, structural genomics; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=84.12 E-value=1.8 Score=21.63 Aligned_cols=70 Identities=16% Similarity=0.082 Sum_probs=43.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-----CCCCCEEEEEECCCCCCCEEEEECCCCC
Q ss_conf 69641079478899998722208956999980695551122200123-----3232115897536578871999868997
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDIAKIKTQDIPDHDVLLAGFPCQ 77 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-----~~~~~DI~~~~~~~~~~~D~l~gG~PCq 77 (83)
+|+|+=||-|...+.+-. ..+++ |.++|+++.+.+..+.+... +...+|+.++...+ ..+|+++...-.+
T Consensus 26 ~VLDiGcG~G~~~~~~~~---~~~~~-v~gvD~S~~~i~~a~~~~~~~~~~v~~~~~d~~~l~~~~-~sfD~I~s~~~l~ 100 (209)
T 2p8j_A 26 TVLDCGAGGDLPPLSIFV---EDGYK-TYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKD-ESMSFVYSYGTIF 100 (209)
T ss_dssp EEEEESCCSSSCTHHHHH---HTTCE-EEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCT-TCEEEEEECSCGG
T ss_pred EEEEEECCCCHHHHHHHH---HCCCE-EEEEECCHHHHHHHHHHHHCCCCEEEEECCEEECCCCCC-CCCCHHHHHHHHH
T ss_conf 899972788999999998---58998-999959799999998622035743653002022368543-4233888766787
No 140
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=83.79 E-value=1.7 Score=21.80 Aligned_cols=72 Identities=15% Similarity=0.132 Sum_probs=43.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-------CCEEEEEECCCCCCCEEEEECC
Q ss_conf 269641079478899998722208956999980695551122200123323-------2115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-------FGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-------~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
.||+|+-||.|...+.+.... ..+.+ |..+|+++.+.+.-+.|...... .+|+.++... ...|.++.-+
T Consensus 120 ~~vLDvGcG~G~~~~~l~~~~-~p~~~-v~gvD~S~~~l~~A~~~~~~~~l~~~~~~~~~d~~~l~~~--~~~d~iv~~~ 195 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSA-CPGVQ-LVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR--EGYDLLTSNG 195 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTT-CTTCE-EEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC--SCEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHH-CCCCE-EEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCC--CCCCEEEEEC
T ss_conf 999994474769999999971-89958-9999798889999975302201232223320008874246--6401799813
Q ss_pred CCC
Q ss_conf 997
Q gi|254780516|r 75 PCQ 77 (83)
Q Consensus 75 PCq 77 (83)
+..
T Consensus 196 ~~~ 198 (305)
T 3ocj_A 196 LNI 198 (305)
T ss_dssp SGG
T ss_pred CCC
T ss_conf 421
No 141
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=83.63 E-value=0.92 Score=23.15 Aligned_cols=62 Identities=24% Similarity=0.359 Sum_probs=41.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCC--CCEEEEECC
Q ss_conf 696410794788999987222089569999806955511222001233232115897536578--871999868
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP--DHDVLLAGF 74 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~--~~D~l~gG~ 74 (83)
+|+|+=||.|.+..-|... +. .|.++|+++.+.+..+.+++......| ...++ .+|+++...
T Consensus 20 ~VLDiGcG~G~~~~~l~~~----~~-~v~gvD~s~~~i~~a~~~~~~~~~~~~-----~~~l~~~~fD~i~~~~ 83 (170)
T 3i9f_A 20 VIVDYGCGNGFYCKYLLEF----AT-KLYCIDINVIALKEVKEKFDSVITLSD-----PKEIPDNSVDFILFAN 83 (170)
T ss_dssp EEEEETCTTCTTHHHHHTT----EE-EEEEECSCHHHHHHHHHHCTTSEEESS-----GGGSCTTCEEEEEEES
T ss_pred EEEEEECCCCHHHHHHHHC----CC-EEEEEECCCCCCCEECCCCEEEEEEEC-----CCCCCCCCEEEEEEEE
T ss_conf 7999808997999999962----99-899994564201000122103553200-----1237878578999850
No 142
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=83.41 E-value=1.9 Score=21.54 Aligned_cols=42 Identities=24% Similarity=0.329 Sum_probs=32.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC
Q ss_conf 69641079478899998722208956999980695551122200123
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~ 49 (83)
.|+|.|+|-|....+..++ +-+ ...+|+++...++-+.++.+
T Consensus 255 iVLDpF~GSGTT~~aa~~l----gR~-~Ig~El~~~y~~~a~~Rl~~ 296 (323)
T 1boo_A 255 LVVDIFGGSNTTGLVAERE----SRK-WISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp EEEETTCTTCHHHHHHHHT----TCE-EEEEESCHHHHHHHHGGGSC
T ss_pred EEEECCCCCCHHHHHHHHC----CCC-EEEEECCHHHHHHHHHHHHH
T ss_conf 9997999986899999981----992-89997899999999999876
No 143
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural genomics consortium, SGC; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=82.81 E-value=1.9 Score=21.61 Aligned_cols=45 Identities=18% Similarity=0.214 Sum_probs=35.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC
Q ss_conf 26964107947889999872220895699998069555112220012
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP 48 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~ 48 (83)
.||+|+-+|-|.+++.|-++....+ .|+++|+++...+.-+.|+.
T Consensus 107 ~rVLE~GtGsG~lt~~LAr~vgp~G--~V~~~D~~~~~~~~Ar~n~~ 151 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQG--RVISFEVRKDHHDLAKKNYK 151 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTC--EEEEEESSHHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHCCCC--EEEEECCCHHHHHHHHHHHH
T ss_conf 8899835377799999999628984--89984399999999999999
No 144
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=82.75 E-value=1 Score=22.87 Aligned_cols=65 Identities=12% Similarity=0.220 Sum_probs=42.1
Q ss_pred CCCCHHHHHHHHHHH-CCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEE-ECCC
Q ss_conf 794788999987222-089569999806955511222001233232115897536578871999-8689
Q gi|254780516|r 9 CGIGGIRLDLEQTFN-HRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLL-AGFP 75 (83)
Q Consensus 9 sG~GG~~~gl~~a~~-~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~-gG~P 75 (83)
-|+|.+....-.+.. ..+++.+..+|.++...+.++..|+....+.|+.++-.+ +++|+++ +.||
T Consensus 8 IG~G~~g~~h~~~~~~~~~~~ivav~d~~~~~~~~~a~~~~~~~~~~~~~ell~~--~~iD~V~I~tp~ 74 (344)
T 3ezy_A 8 IGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIED--PNVDAVLVCSST 74 (344)
T ss_dssp ECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHC--TTCCEEEECSCG
T ss_pred ECCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHCC--CCCCEEEECCCC
T ss_conf 9971999999999972899689999898999999999983998402999999649--998999971631
No 145
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=82.56 E-value=2.5 Score=21.02 Aligned_cols=44 Identities=14% Similarity=0.155 Sum_probs=33.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC
Q ss_conf 2696410794788999987222089569999806955511222001233
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~ 50 (83)
.||||+=||.|....-|..- +++ |.++|+++.+.+..+.+.+..
T Consensus 24 ~rVLD~GCG~G~~~~~La~~----g~~-v~gvD~S~~~i~~a~~~~~~~ 67 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQ----GYH-VVGAELSEAAVERYFTERGEQ 67 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHH----CCE-EEEEEECHHHHHHHHHHHCSC
T ss_pred CEEEEECCCCCHHHHHHHHC----CCE-EEEECCCHHHHHHHHHHHCCC
T ss_conf 97999737898889999967----987-788526599999999972345
No 146
>1xva_A Glycine N-methyltransferase; HET: SAM; 2.20A {Escherichia coli} SCOP: c.66.1.5 PDB: 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=80.53 E-value=2.4 Score=21.07 Aligned_cols=66 Identities=15% Similarity=0.100 Sum_probs=42.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-----CCCCCEEEEEECCC----C---CCCEEE
Q ss_conf 69641079478899998722208956999980695551122200123-----32321158975365----7---887199
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDIAKIKTQD----I---PDHDVL 70 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-----~~~~~DI~~~~~~~----~---~~~D~l 70 (83)
||||+-||.|.....|.+. +++ |.++|+++...+.-+.+... .....++.+.+... + ..+|++
T Consensus 59 ~vLDiGcG~G~~~~~la~~----g~~-v~gvD~s~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v 133 (292)
T 1xva_A 59 RVLDVACGTGVDSIMLVEE----GFS-VTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 133 (292)
T ss_dssp EEEESSCTTSHHHHHHHHT----TCE-EEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred EEEEECCCCCHHHHHHHHC----CCE-EEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEE
T ss_conf 9999047884999999977----996-99998999999999999986444656313566411101244345666761399
Q ss_pred EEC
Q ss_conf 986
Q gi|254780516|r 71 LAG 73 (83)
Q Consensus 71 ~gG 73 (83)
+.-
T Consensus 134 ~~~ 136 (292)
T 1xva_A 134 ICL 136 (292)
T ss_dssp EEC
T ss_pred EEC
T ss_conf 990
No 147
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, protein structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides 2}
Probab=80.23 E-value=3 Score=20.58 Aligned_cols=67 Identities=4% Similarity=-0.082 Sum_probs=43.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCC-----CEEEEEECCCCCCCEEEEECC
Q ss_conf 2696410794788999987222089569999806955511222001233232-----115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~-----~DI~~~~~~~~~~~D~l~gG~ 74 (83)
.||+|+=||-|.+...|... +.+ |.++|+++...+..+.+.+..... .|+..+...+ ..+|+++...
T Consensus 47 ~~vLdvGcG~G~~~~~l~~~----g~~-v~g~D~S~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~fD~Vv~~~ 118 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALER----GAS-VTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELA-GHFDFVLNDR 118 (261)
T ss_dssp CEEEEECTTCHHHHHHHHHT----TCE-EEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGT-TCCSEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHC----CCE-EEEECCCHHHHHHHHHHHHHCCCCCCEEECCHHHCCCCC-CCCCEEEECC
T ss_conf 97999889788899999967----998-999777899999999974640565330212253233457-8846899813
No 148
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.90A {Geobacter sulfurreducens pca}
Probab=80.13 E-value=3 Score=20.55 Aligned_cols=66 Identities=14% Similarity=0.078 Sum_probs=42.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-------CCCEEEEEECCCCCCCEEEE
Q ss_conf 6964107947889999872220895699998069555112220012332-------32115897536578871999
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFGDIAKIKTQDIPDHDVLL 71 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-------~~~DI~~~~~~~~~~~D~l~ 71 (83)
||+|+=+|.|..++.+.++... +- .+.++|+++...+.-+.|+.... +.+|..++.. ....+|+++
T Consensus 59 ~ILEiGtg~G~st~~la~~~~~-~g-~v~~id~~~~~~~~ar~~~~~~g~~~~i~~~~gda~~~~~-~~~~fDlif 131 (210)
T 3c3p_A 59 LVVVPGDGLGCASWWFARAISI-SS-RVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAA-GQRDIDILF 131 (210)
T ss_dssp EEEEESCGGGHHHHHHHTTSCT-TC-EEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHT-TCCSEEEEE
T ss_pred EEEEEECCCHHHHHHHHHHCCC-CE-EEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCHHHCCC-CCCCCCEEE
T ss_conf 8999508143999999997556-81-9999977510378999879872987326786134543022-368867899
No 149
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=79.88 E-value=2.3 Score=21.16 Aligned_cols=74 Identities=16% Similarity=0.142 Sum_probs=42.8
Q ss_pred EEEEECCCCCHHHHHHHH-HHH-----------CCCCEEEEEEECCHHHHHHHHHCCC-----CC--CCCCEEEEEECCC
Q ss_conf 696410794788999987-222-----------0895699998069555112220012-----33--2321158975365
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQ-TFN-----------HRNVECFFSSEINPYSVKTYQANFP-----NT--LIFGDIAKIKTQD 63 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~-a~~-----------~~~~~~v~a~e~d~~a~~~y~~n~~-----~~--~~~~DI~~~~~~~ 63 (83)
+|+|-+||.|||=+...+ ... ...-..++-.|+++.+.+.-+.|.- .. ...+|--.-+...
T Consensus 247 ~I~DPacGsGgfLi~a~~~i~~~~~~~~~~~~~~~~~~~l~G~Ei~~~~~~la~~nm~l~g~~~~~~~~~~d~l~~~~~~ 326 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHP 326 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCT
T ss_pred CEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 37037777617899999999982452222202222011061503877999999988986188866453567543465565
Q ss_pred CCCCEEEEECCCC
Q ss_conf 7887199986899
Q gi|254780516|r 64 IPDHDVLLAGFPC 76 (83)
Q Consensus 64 ~~~~D~l~gG~PC 76 (83)
...+|++++=||=
T Consensus 327 ~~~fD~Il~NPPf 339 (544)
T 3khk_A 327 DLRADFVMTNPPF 339 (544)
T ss_dssp TCCEEEEEECCCS
T ss_pred CCCCCEEEECCCC
T ss_conf 5446757506987
No 150
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial virulence factor, transferase/DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=79.87 E-value=1.2 Score=22.66 Aligned_cols=36 Identities=19% Similarity=0.427 Sum_probs=25.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHH
Q ss_conf 6964107947889999872220895699998069555112220
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA 45 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~ 45 (83)
+++|.|+|.|...+.+ ..+.++.+|+++.-...|+.
T Consensus 30 ~yvEpF~GggsV~l~~-------~~~~~i~ND~n~~l~n~~~~ 65 (278)
T 2g1p_A 30 CLVEPFVGAGSVFLNT-------DFSRYILADINSDLISLYNI 65 (278)
T ss_dssp EEEETTCTTCHHHHTC-------CCSEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHCC-------CCCEEEEEECCHHHHHHHHH
T ss_conf 5997446855786205-------77628999787889999999
No 151
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=79.75 E-value=2.8 Score=20.69 Aligned_cols=44 Identities=16% Similarity=0.344 Sum_probs=32.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC
Q ss_conf 26964107947889999872220895699998069555112220012
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP 48 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~ 48 (83)
.+|||+=||-|.+.+.+.... +-..|..+|+++.+.+.-+.|-.
T Consensus 48 ~~vLDiGCG~G~~~i~la~~~---~~~~v~GiDis~~~i~~A~~n~~ 91 (292)
T 3g07_A 48 RDVLDLGCNVGHLTLSIACKW---GPSRMVGLDIDSRLIHSARQNIR 91 (292)
T ss_dssp SEEEEESCTTCHHHHHHHHHT---CCSEEEEEESCHHHHHHHHHTC-
T ss_pred CEEEEEECCCCHHHHHHHHHC---CCCEEEEEECCHHHHHHHHHHHH
T ss_conf 959998579789999999878---99889997098899999999999
No 152
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=79.08 E-value=0.48 Score=24.59 Aligned_cols=68 Identities=16% Similarity=0.228 Sum_probs=46.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC----CCCCCEEEEEECCCCCCCEEEEECCCC
Q ss_conf 69641079478899998722208956999980695551122200123----323211589753657887199986899
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAKIKTQDIPDHDVLLAGFPC 76 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~----~~~~~DI~~~~~~~~~~~D~l~gG~PC 76 (83)
+|+|.=+|-|.++..|-+. ...+.++|+|+...+.++..++. +.+.+|+.+++... .....++|--|=
T Consensus 32 ~VlEIGpG~G~LT~~L~~~-----~~~v~aiE~D~~l~~~l~~~~~~~~n~~ii~~D~l~~~~~~-~~~~~vv~NLPY 103 (245)
T 1yub_A 32 TVYEIGTGKGHLTTKLAKI-----SKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPN-KQRYKIVGNIPY 103 (245)
T ss_dssp EEEECSCCCSSCSHHHHHH-----SSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCC-SSEEEEEEECCS
T ss_pred EEEEECCCHHHHHHHHHHC-----CCCCEEECCCHHHHHHHHHHHHCCCCCHHHHCCHHCCCCCC-CCCEEEEECCCH
T ss_conf 6899799735999999961-----65004034044668988755411340002201100014445-786568716757
No 153
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=78.66 E-value=3.3 Score=20.40 Aligned_cols=65 Identities=22% Similarity=0.368 Sum_probs=45.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC-----C-CCCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 6964107947889999872220895699998069555112220012-----3-32321158975365788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-----N-TLIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~-----~-~~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
.|+|.=.|.|.++..|-+. + ..|.++|+|+...+.++..+. . ..+.+|+.+.. .++.+.++|-.|
T Consensus 45 ~VLEIGPG~G~LT~~Ll~~----~-~~v~aiE~D~~l~~~L~e~~~~~~~~~~~~i~~D~~~~~---~~~~~~vVgNLP 115 (299)
T 2h1r_A 45 IVLEIGCGTGNLTVKLLPL----A-KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV---FPKFDVCTANIP 115 (299)
T ss_dssp EEEEECCTTSTTHHHHTTT----S-SEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC---CCCCSEEEEECC
T ss_pred EEEEECCCHHHHHHHHHHC----C-CEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH---CCCCCEEECCCC
T ss_conf 8999689727999999823----9-907999777089999997543213333332034420000---245434614788
No 154
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=78.36 E-value=2.1 Score=21.31 Aligned_cols=69 Identities=23% Similarity=0.360 Sum_probs=43.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC-----CC-CCCCEEEEEECCCCCCCEEEEECC
Q ss_conf 26964107947889999872220895699998069555112220012-----33-232115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-----NT-LIFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~-----~~-~~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
.||+|+=||.|.+..-+.+.+ .+. .|.++|+++...+.-+.+.+ +. ...+|+.++.... ..+|+++...
T Consensus 39 ~rVLDiGcG~G~~~~~la~~~--~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~-~sfD~V~~~~ 113 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKNN--PDA-EITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFED-SSFDHIFVCF 113 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHHC--TTS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCT-TCEEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHHC--CCC-EEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCHHHCCCCC-CCCCCHHHHH
T ss_conf 989995585889999999879--997-89999795676322221122115566421533523204777-8812111112
No 155
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, coiled coil, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus dsm 4304} SCOP: c.66.1.3
Probab=78.32 E-value=3.4 Score=20.31 Aligned_cols=73 Identities=10% Similarity=0.054 Sum_probs=44.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC----CCCCCEEEEEEC--CCCCCCEEEEECCC
Q ss_conf 269641079478899998722208956999980695551122200123----323211589753--65788719998689
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAKIKT--QDIPDHDVLLAGFP 75 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~----~~~~~DI~~~~~--~~~~~~D~l~gG~P 75 (83)
.||+||=||.|....-+..... -..|+++|+++.+.+..+.+... .++..|...... .....+|++...++
T Consensus 59 ~~VLDlG~GtG~~~~~la~~~~---~g~V~avD~s~~~i~~a~~~a~~~~n~~~i~~~~~~~~~~~~~~~~v~~i~~~~~ 135 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVD---EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDIA 135 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTT---TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECCC
T ss_pred CEEEEECCCCCHHHHHHHHHCC---CCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEEECC
T ss_conf 9999956888888999997436---9859999699999999997786489707999405674112243321358872023
Q ss_pred CC
Q ss_conf 97
Q gi|254780516|r 76 CQ 77 (83)
Q Consensus 76 Cq 77 (83)
+.
T Consensus 136 ~~ 137 (210)
T 1nt2_A 136 QK 137 (210)
T ss_dssp ST
T ss_pred CH
T ss_conf 61
No 156
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=78.31 E-value=2.4 Score=21.09 Aligned_cols=71 Identities=27% Similarity=0.368 Sum_probs=47.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEEC---CCCCCCEEEEECCC
Q ss_conf 269641079478899998722208956999980695551122200123323211589753---65788719998689
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT---QDIPDHDVLLAGFP 75 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~---~~~~~~D~l~gG~P 75 (83)
|||+ -+|+|-+...+-+.+...+++++ ..|.|+...+.++.++....+++|.++... ..+.+.|.++...|
T Consensus 5 m~Vi--I~G~G~~G~~la~~L~~~g~~v~-vId~d~~~~~~~~~~~~~~vi~gd~~~~~~L~~a~i~~a~~vi~~t~ 78 (140)
T 1lss_A 5 MYII--IAGIGRVGYTLAKSLSEKGHDIV-LIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTG 78 (140)
T ss_dssp CEEE--EECCSHHHHHHHHHHHHTTCEEE-EEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred CEEE--EECCCHHHHHHHHHHHHCCCCEE-EEEECHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCEEEEEEC
T ss_conf 9999--99989999999999997799589-98501566554453147459988761577787459130388999508
No 157
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=76.22 E-value=2.1 Score=21.32 Aligned_cols=66 Identities=11% Similarity=0.031 Sum_probs=43.0
Q ss_pred CCCHHHHH-HHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEE-EECCCCC
Q ss_conf 94788999-98722208956999980695551122200123323211589753657887199-9868997
Q gi|254780516|r 10 GIGGIRLD-LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVL-LAGFPCQ 77 (83)
Q Consensus 10 G~GG~~~g-l~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l-~gG~PCq 77 (83)
|.|.+... +..+....+++.++.+|.++...+.+...++....+.|+.++-. -+++|++ ++.||..
T Consensus 7 G~G~~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~e~l~--~~~iD~v~i~tp~~~ 74 (332)
T 2glx_A 7 GASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVG--DPDVDAVYVSTTNEL 74 (332)
T ss_dssp SCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHT--CTTCCEEEECSCGGG
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCEECCHHHHHC--CCCCCEEEECCCCHH
T ss_conf 96699999999997389978999984999999999998099940189999956--999999999688446
No 158
>1im8_A YECO; methyltransferase, adenosylhomocysteine, structural genomics, hypothetical protein, structure 2 function project, S2F; HET: SAI; 2.20A {Haemophilus influenzae rd KW20} SCOP: c.66.1.14
Probab=75.08 E-value=4.3 Score=19.77 Aligned_cols=74 Identities=16% Similarity=0.231 Sum_probs=43.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEE--CCC--CCCCEEEEECCCCC
Q ss_conf 6964107947889999872220895699998069555112220012332321158975--365--78871999868997
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK--TQD--IPDHDVLLAGFPCQ 77 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~--~~~--~~~~D~l~gG~PCq 77 (83)
+++|+=||.|.....+.+.....+++ +..+|+++...+.-+.+.........+..+. ..+ .++.|+++...-.+
T Consensus 61 ~vLDlGcGtG~~~~~l~~~~~~~~~~-v~giD~S~~ml~~A~~k~~~~~~~~~~~~~~~d~~~~~~~~~d~i~~~~~l~ 138 (244)
T 1im8_A 61 NVYDLGCSRGAATLSARRNINQPNVK-IIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVILNFTLQ 138 (244)
T ss_dssp EEEEESCTTCHHHHHHHHTCCCSSCE-EEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEEEESCGG
T ss_pred EEEEEEECCCHHHHHHHHHCCCCCCE-EEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
T ss_conf 89992002228899988633699808-9997697899999986443106543211012321000124321268864223
No 159
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=74.96 E-value=1.9 Score=21.57 Aligned_cols=70 Identities=14% Similarity=0.112 Sum_probs=41.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-------CC-CCCEEEEEECC-------CCCC
Q ss_conf 269641079478899998722208956999980695551122200123-------32-32115897536-------5788
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TL-IFGDIAKIKTQ-------DIPD 66 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-------~~-~~~DI~~~~~~-------~~~~ 66 (83)
.+|+|+++|.|.-++-+-.. +.+ |.++|.+|.....++.+... .. ....|+-+..+ .-+.
T Consensus 90 ~~VlDaTaGlG~Da~vlA~~----G~~-V~~iEr~p~l~~ll~d~l~ra~~~~~~~~~~~~ri~l~~~Ds~~~L~~~~~~ 164 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV----GCR-VRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPR 164 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH----TCC-EEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSC
T ss_pred CEEEECCCCCHHHHHHHHHC----CCE-EEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCCHHHHHHHCCCC
T ss_conf 84898787742999999977----996-8998479999999999999987273778998632378738799998626766
Q ss_pred CEEEEECCCC
Q ss_conf 7199986899
Q gi|254780516|r 67 HDVLLAGFPC 76 (83)
Q Consensus 67 ~D~l~gG~PC 76 (83)
+|+|.--|+=
T Consensus 165 ~DvIYlDPMF 174 (258)
T 2oyr_A 165 PQVVYLDPMF 174 (258)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
T ss_conf 8879989999
No 160
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=74.50 E-value=2.6 Score=20.88 Aligned_cols=68 Identities=16% Similarity=0.256 Sum_probs=45.1
Q ss_pred ECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEEC---CCCCCCEEEEECCC
Q ss_conf 1079478899998722208956999980695551122200123323211589753---65788719998689
Q gi|254780516|r 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT---QDIPDHDVLLAGFP 75 (83)
Q Consensus 7 LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~---~~~~~~D~l~gG~P 75 (83)
+-+|+|-+..-+-+.+...++++ ..+|.|+..++.++..++...++||.++... ..+.+.|.++.-.+
T Consensus 23 iI~G~g~~G~~ia~~L~~~g~~v-vvId~d~~~~~~l~~~~~~~~i~GD~~d~~~L~~a~i~~a~~vI~~t~ 93 (155)
T 2g1u_A 23 VIFGCGRLGSLIANLASSSGHSV-VVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN 93 (155)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEE-EEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred EEECCCHHHHHHHHHHHHCCCEE-EEEECCHHHHHHHHCCCCCEEEECCCCCHHHHHHCCHHHCCEEEECCC
T ss_conf 99899899999999999789979-999468898443120334136977760078887418224689999149
No 161
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=74.41 E-value=3.2 Score=20.46 Aligned_cols=35 Identities=23% Similarity=0.351 Sum_probs=24.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHH
Q ss_conf 696410794788999987222089569999806955511222
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ 44 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~ 44 (83)
+++|.|+|.|+..+.+. .+.++.+|+|+.-...|+
T Consensus 38 ~yvEpF~Gggav~~~~~-------~~~~viND~n~~lin~~~ 72 (284)
T 2dpm_A 38 RYFEPFVGGGALFFDLA-------PKDAVINDFNAELINCYQ 72 (284)
T ss_dssp CEEETTCTTCHHHHHHC-------CSEEEEEESCHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHC-------CCCEEEEECCHHHHHHHH
T ss_conf 89812788899997407-------783899967788999999
No 162
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly, inter-subunit disulfide bridge; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=74.02 E-value=4.5 Score=19.68 Aligned_cols=67 Identities=19% Similarity=0.122 Sum_probs=42.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC----CCCCEEEEEECCCCCCCEEEEECC
Q ss_conf 2696410794788999987222089569999806955511222001233----232115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~----~~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
.||+|+=||.|-++.-+.+.. ..|.++|+++...+.-+.|+... .+.+|......++ ..+|.|+.+.
T Consensus 72 ~~VLeIG~GsGy~ta~La~l~-----~~V~~vE~~~~~~~~A~~~~~~~~nv~~~~gDg~~g~~~~-~pfD~Iiv~~ 142 (231)
T 1vbf_A 72 QKVLEIGTGIGYYTALIAEIV-----DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEE-KPYDRVVVWA 142 (231)
T ss_dssp CEEEEECCTTSHHHHHHHHHS-----SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGG-CCEEEEEESS
T ss_pred CEEEEECCCCCHHHHHHHHHC-----CEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHCCCCCC-CCEEEEEECC
T ss_conf 989997798778899999856-----7876762899999999987406862689866320287346-9857999857
No 163
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=73.39 E-value=3.6 Score=20.19 Aligned_cols=67 Identities=7% Similarity=0.041 Sum_probs=40.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCC--CEEEEEECCCCC--CCEEEEE
Q ss_conf 2696410794788999987222089569999806955511222001233232--115897536578--8719998
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKIKTQDIP--DHDVLLA 72 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~--~DI~~~~~~~~~--~~D~l~g 72 (83)
.+++|+=|..|||..-+-+ .+.+.|+++|.-..-..---++.|.+... -|++++...+++ .+|+++.
T Consensus 39 k~~lDiGaStGGFTd~lLq----~GA~~V~aVDVG~~qL~~~lr~d~rV~~~E~~n~R~~~~~~~~~~~~Dlvv~ 109 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQ----NGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSI 109 (232)
T ss_dssp CEEEEETCTTSHHHHHHHH----TTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEE
T ss_pred CEEEECCCCCCHHHHHHHH----CCCCEEEEEECCCHHHHHHHHCCCCCCCHHHHCCCCCCHHHCCCCCCCEEEE
T ss_conf 9899858898589999998----0987899994370343077743987032021014455333304688878997
No 164
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=72.70 E-value=2.9 Score=20.65 Aligned_cols=42 Identities=7% Similarity=0.071 Sum_probs=29.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCC
Q ss_conf 2696410794788999987222089569999806955511222001
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF 47 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~ 47 (83)
.+||||-||-||--.-+..+ +...+..+|+++.+.+.-+.++
T Consensus 50 ~~VLDlgcG~GgDl~K~~~~----~~~~vvGiDiS~~~I~~A~~R~ 91 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYG----EIALLVATDPDADAIARGNERY 91 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHT----TCSEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEEEEEECHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHH
T ss_conf 97999950004527999966----9988999979899999999999
No 165
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=72.33 E-value=5.1 Score=19.41 Aligned_cols=71 Identities=17% Similarity=0.191 Sum_probs=43.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC----CCCCEEEEEECCC--CCCCEEEEECCC
Q ss_conf 2696410794788999987222089569999806955511222001233----2321158975365--788719998689
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIAKIKTQD--IPDHDVLLAGFP 75 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~----~~~~DI~~~~~~~--~~~~D~l~gG~P 75 (83)
.||+||=||.|....-+.... +--.|+++|+++.+.+..+.+.... ++..|........ ...+|+++.-..
T Consensus 76 ~~VLDlGcGtG~~~~~la~~~---~~G~V~aVDiSp~mi~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~i~~~~~ 152 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIA---DKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVA 152 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHT---TTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEECCC
T ss_pred CEEEEECCCCCHHHHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEEECC
T ss_conf 999996797798999999758---99659999799899999998776448731798413586423566635999971012
No 166
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=72.24 E-value=4.7 Score=19.60 Aligned_cols=67 Identities=16% Similarity=0.131 Sum_probs=39.7
Q ss_pred CCCCHHHHH--HHHHHHCCCCEEEEEEECCHHHHHHHHHCCC--C--CCCCCEEEEEECCCCCCCEEEE-ECCCCC
Q ss_conf 794788999--9872220895699998069555112220012--3--3232115897536578871999-868997
Q gi|254780516|r 9 CGIGGIRLD--LEQTFNHRNVECFFSSEINPYSVKTYQANFP--N--TLIFGDIAKIKTQDIPDHDVLL-AGFPCQ 77 (83)
Q Consensus 9 sG~GG~~~g--l~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~--~--~~~~~DI~~~~~~~~~~~D~l~-gG~PCq 77 (83)
-|+|++... +.......+++++..+|.++...+.+...|. . ...+.|..++-.+ +++|+++ +.||-.
T Consensus 89 iG~G~~g~~~~~~~~~~~~~~~lvav~d~~~~~a~~~~~~~~~~~~~~~~~~~~~~ll~~--~~iD~V~i~tp~~~ 162 (433)
T 1h6d_A 89 VGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKD--PKIDAVYIILPNSL 162 (433)
T ss_dssp ECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGC--TTCCEEEECSCGGG
T ss_pred EECHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCC--CCCCEEEEECCHHH
T ss_conf 908199999999999729997899999299999999999719983446676899999569--99878999098799
No 167
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=72.21 E-value=3.5 Score=20.22 Aligned_cols=70 Identities=9% Similarity=0.183 Sum_probs=41.6
Q ss_pred CEEEEECCCCCHHHHH-HHHHH-HCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 2696410794788999-98722-20895699998069555112220012332321158975365788719998689
Q gi|254780516|r 2 LKITDLFCGIGGIRLD-LEQTF-NHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 2 l~v~~LFsG~GG~~~g-l~~a~-~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
||+. .-|+|.+..- ++.+. ...+++.+..+|.++.+.+.++..|+....+.|+.++-.+ +++|+++=..|
T Consensus 9 irvg--iIG~G~~g~~~~~~~~~~~~~~~l~~i~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~--~~vD~v~I~tp 80 (346)
T 3cea_A 9 LRAA--IIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDT--ENIDAIFIVAP 80 (346)
T ss_dssp EEEE--EECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTT--SCCSEEEECSC
T ss_pred CEEE--EECCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHCC--CCCCEEEEECH
T ss_conf 6699--998849999999999854999689999879999999999982998515999999648--99888999571
No 168
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=71.43 E-value=5.4 Score=19.30 Aligned_cols=45 Identities=16% Similarity=0.313 Sum_probs=28.9
Q ss_pred EEEEEECCHHHHHHHHHCCCCCCC-------CCEEEEEECCCCCCCEEEEECCC
Q ss_conf 999980695551122200123323-------21158975365788719998689
Q gi|254780516|r 29 CFFSSEINPYSVKTYQANFPNTLI-------FGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 29 ~v~a~e~d~~a~~~y~~n~~~~~~-------~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
.+...|+|+.+.+.-+.|....-. .+|..++... .+.++++.=||
T Consensus 259 ~i~g~D~d~~~i~~a~~N~~~agv~~~i~~~~~d~~~~~~~--~~~~~ivtNPP 310 (385)
T 3ldu_A 259 KIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE--DEFGFIITNPP 310 (385)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS--CBSCEEEECCC
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCC--CCCCEEEECCC
T ss_conf 67996587889999999999739976378875458775999--99987995897
No 169
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=71.23 E-value=3 Score=20.60 Aligned_cols=67 Identities=12% Similarity=0.134 Sum_probs=40.5
Q ss_pred CCCCCHHHHH--HHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEE-EECCCC
Q ss_conf 0794788999--98722208956999980695551122200123323211589753657887199-986899
Q gi|254780516|r 8 FCGIGGIRLD--LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVL-LAGFPC 76 (83)
Q Consensus 8 FsG~GG~~~g--l~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l-~gG~PC 76 (83)
+=|+|.+..- +.......+++.+..+|.++...+-....++..+.+.|+.++-.+ +++|++ ++.||-
T Consensus 7 iIG~G~~~~~~h~~~~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ell~~--~~iD~V~i~tp~~ 76 (349)
T 3i23_A 7 FIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTADLNELLTD--PEIELITICTPAH 76 (349)
T ss_dssp EECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEESCTHHHHSC--TTCCEEEECSCGG
T ss_pred EECCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCCEECCHHHHHCC--CCCCEEEECCCHH
T ss_conf 998809999999999961989789999909999999997553899357999999659--9988899888714
No 170
>1nw3_A Histone methyltransferase DOT1L; HDOT1, histone lysine methyltransferase,; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.31
Probab=70.79 E-value=5.6 Score=19.22 Aligned_cols=41 Identities=20% Similarity=0.273 Sum_probs=30.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHC
Q ss_conf 69641079478899998722208956999980695551122200
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n 46 (83)
+++|+-||.|.+.+-+... .+.+.+..+|+++.+.+.-+.+
T Consensus 158 ~~~DiG~G~G~~~~~~a~~---~~~~~~~Giei~~~~~~~A~~~ 198 (416)
T 1nw3_A 158 LFVDLGSGVGQVVLQVAAA---TNCKHHYGVEKADIPAKYAETM 198 (416)
T ss_dssp EEEEETCTTSHHHHHHHHH---CCCSEEEEEECSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH---CCCCEEEEEECCHHHHHHHHHH
T ss_conf 8996688888899999997---6998899997999999999999
No 171
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=70.66 E-value=3.5 Score=20.23 Aligned_cols=53 Identities=15% Similarity=0.225 Sum_probs=33.5
Q ss_pred HHHHHCCCCEEEEEEECCHHHHHHHHHCCCC------CCCCCEEEEEECCCCCCCEEEEEC
Q ss_conf 8722208956999980695551122200123------323211589753657887199986
Q gi|254780516|r 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPN------TLIFGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 19 ~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~------~~~~~DI~~~~~~~~~~~D~l~gG 73 (83)
+.+.++ . ..|..+|+|+...++-+..||. ..+.+|.+++-...-.+.|+|+.-
T Consensus 88 re~lk~-~-~~v~~VEiD~~Vi~~a~~~fp~~~d~r~~~~~~D~~~~l~~~~~~yDvIi~D 146 (262)
T 2cmg_A 88 HQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCL 146 (262)
T ss_dssp HHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEES
T ss_pred HHHHCC-C-CEEEEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEC
T ss_conf 998458-9-7479998389999999986842235433601557999986154677889988
No 172
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein, transferase; HET: TNA MTA; 1.66A {Methanothermobacterthermautotrophicus} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A*
Probab=70.42 E-value=5.7 Score=19.18 Aligned_cols=64 Identities=19% Similarity=0.071 Sum_probs=39.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC------CCCCEEEEEECCCCCCCEEEE
Q ss_conf 2696410794788999987222089569999806955511222001233------232115897536578871999
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGDIAKIKTQDIPDHDVLL 71 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~------~~~~DI~~~~~~~~~~~D~l~ 71 (83)
-||+++=||.|+++.-+-. ...+.+ |..+|+++.+.+.-+.+.... ...+|...++ ..++|+++
T Consensus 124 ~rVLdiGcG~g~~t~~~~a--~~~g~~-V~gIDisp~~~~~Ar~~~~~~g~~~v~~~~gD~~~l~---~~~fDvV~ 193 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLS--HVYGMR-VNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID---GLEFDVLM 193 (298)
T ss_dssp CEEEEECCCSSCHHHHHHH--HTTCCE-EEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG---GCCCSEEE
T ss_pred CEEEEEECCCHHHHHHHHH--HCCCCE-EEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC---CCCCCEEE
T ss_conf 9899960685699999998--568998-9999699999999999798649950899973554478---99989899
No 173
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=70.39 E-value=4.1 Score=19.91 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=28.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC
Q ss_conf 6964107947889999872220895699998069555112220012
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP 48 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~ 48 (83)
||++.-||-|=-.+-|-. .|++ |.++|+.+.|++..+.+..
T Consensus 71 rvL~pgCG~G~da~~LA~----~G~~-V~gvD~S~~Ai~~a~~~~~ 111 (252)
T 2gb4_A 71 RVFFPLCGKAIEMKWFAD----RGHT-VVGVEISEIGIREFFAEQN 111 (252)
T ss_dssp EEEETTCTTCTHHHHHHH----TTCE-EEEECSCHHHHHHHHHHTT
T ss_pred EEEEECCCCHHHHHHHHH----CCCE-EEEECCCHHHHHHHHHHCC
T ss_conf 899989878088999984----8984-8998162999999998754
No 174
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=69.92 E-value=5.9 Score=19.12 Aligned_cols=66 Identities=15% Similarity=0.124 Sum_probs=40.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC-------CCCCEEEEEECCCCCCCEEEEEC
Q ss_conf 2696410794788999987222089569999806955511222001233-------23211589753657887199986
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~-------~~~~DI~~~~~~~~~~~D~l~gG 73 (83)
.||+|+-||.|.+..-+.+. .+.+ +..+|+++...+..+.+.... ...+|..+.... ..+|+++..
T Consensus 38 ~rVLDiGcG~G~~~~~la~~---~~~~-v~gvD~s~~~l~~a~~~~~~~gl~~~v~~~~~d~~~~~~~--~~fD~v~~~ 110 (256)
T 1nkv_A 38 TRILDLGSGSGEMLCTWARD---HGIT-GTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVAN--EKCDVAACV 110 (256)
T ss_dssp CEEEEETCTTCHHHHHHHHH---TCCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCS--SCEEEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHH---CCCE-EEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCC--CCEEEEEEE
T ss_conf 99999858888899999986---4998-9999898367789988677606554444113636450567--844699997
No 175
>2pt6_A Spermidine synthase; transferase, structural genomics consortium, SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum 3D7} PDB: 2pss_A* 2pt9_A*
Probab=69.21 E-value=4 Score=19.94 Aligned_cols=69 Identities=20% Similarity=0.229 Sum_probs=38.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC----------CCCCEEEEEECCCCCCCEEEEE
Q ss_conf 696410794788999987222089569999806955511222001233----------2321158975365788719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------LIFGDIAKIKTQDIPDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~----------~~~~DI~~~~~~~~~~~D~l~g 72 (83)
||+-+=.|.|+.. +.+.++...+.+..+|+|+.-.++-+..+|.. .+.+|-+++-.+.-.+.|+|+.
T Consensus 119 ~VLIiGgGdG~~~---rellk~~~~~~v~~VEID~~Vv~~ak~~f~~~~~~~~dprv~v~~~Da~~~l~~~~~~yDvIi~ 195 (321)
T 2pt6_A 119 NVLVVGGGDGGII---RELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp EEEEEECTTCHHH---HHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred EEEEECCCCHHHH---HHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHCCCCCCEEEE
T ss_conf 6999848953999---9999729964147852579999999986266234436876269961699998736676677999
Q ss_pred CC
Q ss_conf 68
Q gi|254780516|r 73 GF 74 (83)
Q Consensus 73 G~ 74 (83)
-.
T Consensus 196 D~ 197 (321)
T 2pt6_A 196 DS 197 (321)
T ss_dssp EC
T ss_pred EC
T ss_conf 37
No 176
>1vlm_A SAM-dependent methyltransferase; possible histamine N-methyltransferase, structural genomics, JCSG, protein structure initiative, PSI; 2.20A {Thermotoga maritima MSB8} SCOP: c.66.1.41
Probab=68.61 E-value=2.7 Score=20.78 Aligned_cols=60 Identities=13% Similarity=0.123 Sum_probs=37.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEC
Q ss_conf 69641079478899998722208956999980695551122200123323211589753657887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG 73 (83)
|+||+=||.|.+...+. + +..+|+++.+.+..+.+ .-..+.+|+.++...+ ..+|+++..
T Consensus 50 ~vLDiGcGtG~~~~~l~--------~-~~giD~s~~~i~~a~~~-~i~~~~~d~~~l~~~~-~sfD~V~~~ 109 (219)
T 1vlm_A 50 RGVEIGVGTGRFAVPLK--------I-KIGVEPSERMAEIARKR-GVFVLKGTAENLPLKD-ESFDFALMV 109 (219)
T ss_dssp CEEEETCTTSTTHHHHT--------C-CEEEESCHHHHHHHHHT-TCEEEECBTTBCCSCT-TCEEEEEEE
T ss_pred EEEEECCCCCHHHHHHH--------H-EEEEECCHHHHHHHHHC-CCEEEECCHHHCCCCC-CCCCEECCC
T ss_conf 09998586779999775--------8-69994999999999986-9989987778789987-873320313
No 177
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=68.52 E-value=6.3 Score=18.96 Aligned_cols=55 Identities=20% Similarity=0.147 Sum_probs=38.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC---CCCCCEEEEE
Q ss_conf 269641079478899998722208956999980695551122200123---3232115897
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAKI 59 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~---~~~~~DI~~~ 59 (83)
.+|+|+.-|.|.++..|-.. .+.+.+.+.|.|+.-.+.++..+.+ ..+.+|+-++
T Consensus 60 ~~IlEIgPG~G~lT~~Ll~~---~~pk~~i~iE~D~~~~~~L~~~~~~~~~~ii~~D~l~~ 117 (353)
T 1i4w_A 60 LKVLDLYPGVGIQSAIFYNK---YCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDW 117 (353)
T ss_dssp CEEEEESCTTCHHHHHHHHH---HCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCH
T ss_pred CEEEEECCCCCHHHHHHHHH---CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEECCHHHH
T ss_conf 96999899988999999852---58876999977788999999871458847994645653
No 178
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural genomics, PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=68.04 E-value=2.5 Score=20.98 Aligned_cols=67 Identities=13% Similarity=0.178 Sum_probs=45.5
Q ss_pred ECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEEC---CCCCCCEEEEECC
Q ss_conf 1079478899998722208956999980695551122200123323211589753---6578871999868
Q gi|254780516|r 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT---QDIPDHDVLLAGF 74 (83)
Q Consensus 7 LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~---~~~~~~D~l~gG~ 74 (83)
+-+|.|-+...+-+.+...+++++ ..|.|+..++.++.+++...+++|.++... -.+.++|.+++-.
T Consensus 4 iI~G~g~~g~~la~~L~~~g~~vv-vid~d~~~~~~~~~~~~~~~i~gD~~~~~~L~~a~i~~a~~~ia~t 73 (218)
T 3l4b_C 4 IIIGGETTAYYLARSMLSRKYGVV-IINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILT 73 (218)
T ss_dssp EEECCHHHHHHHHHHHHHTTCCEE-EEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred EEECCCHHHHHHHHHHHHCCCCEE-EEECCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCEEEECC
T ss_conf 999988999999999997899899-9999999999999852630785454326888766404665476415
No 179
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=68.02 E-value=3.9 Score=19.99 Aligned_cols=69 Identities=12% Similarity=0.200 Sum_probs=41.1
Q ss_pred CCCCCHHHHHH-HHHHH-CCCCEEEEEEECCHHHHHHHHHCCCC-CCCCCEEEEEECCCCCCCEEEE-ECCCCCC
Q ss_conf 07947889999-87222-08956999980695551122200123-3232115897536578871999-8689975
Q gi|254780516|r 8 FCGIGGIRLDL-EQTFN-HRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPDHDVLL-AGFPCQP 78 (83)
Q Consensus 8 FsG~GG~~~gl-~~a~~-~~~~~~v~a~e~d~~a~~~y~~n~~~-~~~~~DI~~~~~~~~~~~D~l~-gG~PCq~ 78 (83)
.-|.|.+..-. ..+.. ..+++.++.+|.++...+.++..|+. ...+.|+.++-.+ +++|+++ +.||..-
T Consensus 7 iiG~G~~g~~h~~~~~~~~~~~~l~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ll~~--~~~D~V~i~tp~~~H 79 (344)
T 3mz0_A 7 VIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLAD--ENVDAVLVTSWGPAH 79 (344)
T ss_dssp EECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHC--TTCCEEEECSCGGGH
T ss_pred EECCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEECCHHHHHCC--CCCCEEEECCCCCCH
T ss_conf 9998299999999998428996899998999999999999858998067999999559--998889962652115
No 180
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.79A {Cyanidioschyzon merolae strain 10D}
Probab=67.79 E-value=6.5 Score=18.88 Aligned_cols=42 Identities=12% Similarity=0.249 Sum_probs=29.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEC-CHHHHHHHHHCCC
Q ss_conf 696410794788999987222089569999806-9555112220012
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-NPYSVKTYQANFP 48 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~-d~~a~~~y~~n~~ 48 (83)
||+||-||.|-..+.+-.. +.+.|...|. ++......+.|..
T Consensus 82 ~VLELGaGtGl~gl~aA~~----ga~~Vv~tD~~~~~~~~~l~~Nv~ 124 (281)
T 3bzb_A 82 TVCELGAGAGLVSIVAFLA----GADQVVATDYPDPEILNSLESNIR 124 (281)
T ss_dssp EEEETTCTTSHHHHHHHHT----TCSEEEEEECSCHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHH----CCCEEEEEECCCHHHHHHHHHHHH
T ss_conf 2999785522999999985----898799997696788999999999
No 181
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=66.88 E-value=6.8 Score=18.78 Aligned_cols=70 Identities=23% Similarity=0.305 Sum_probs=40.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-----------CCCCCEEEEEECCCCCCCEEEE
Q ss_conf 69641079478899998722208956999980695551122200123-----------3232115897536578871999
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----------TLIFGDIAKIKTQDIPDHDVLL 71 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-----------~~~~~DI~~~~~~~~~~~D~l~ 71 (83)
||+-+=.|-|+.. +.+.+..+.+.+..+|+|+...++-+..+|. ..+.+|-.++-.+.-...|+|+
T Consensus 86 ~VLiiGgG~G~~~---~e~lk~~~v~~v~~VEiD~~Vi~~a~~~~~~~~~~~~~dprv~i~~~Da~~~l~~~~~~yDvIi 162 (294)
T 3adn_A 86 HVLIIGGGDGAML---REVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp EEEEESCTTCHHH---HHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred EEEEECCCCHHHH---HHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCEEE
T ss_conf 6999889837999---9999819966389971789999998744841135546788579995168999851688777899
Q ss_pred ECCC
Q ss_conf 8689
Q gi|254780516|r 72 AGFP 75 (83)
Q Consensus 72 gG~P 75 (83)
.-.+
T Consensus 163 ~D~~ 166 (294)
T 3adn_A 163 SDCT 166 (294)
T ss_dssp ECC-
T ss_pred EECC
T ss_conf 8088
No 182
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=66.78 E-value=5.1 Score=19.44 Aligned_cols=68 Identities=19% Similarity=0.174 Sum_probs=42.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-----C-CCCCEEEEEECCCCCCCEEEEECC
Q ss_conf 269641079478899998722208956999980695551122200123-----3-232115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----T-LIFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-----~-~~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
.||+++=||.|.++.-+.+.. + ..|.++|+++...+.-+.|... + .+.+|..+.... -..+|.++-+.
T Consensus 93 ~~VLeIGsGtGy~ta~la~l~---g-~~V~~IE~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~-~~~fD~I~v~~ 166 (235)
T 1jg1_A 93 MNILEVGTGSGWNAALISEIV---K-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPP-KAPYDVIIVTA 166 (235)
T ss_dssp CCEEEECCTTSHHHHHHHHHH---C-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-GCCEEEEEECS
T ss_pred CEEEEECCCCCHHHHHHHHHC---C-CEEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC-CCCCCEEEEEC
T ss_conf 879994788767899999864---9-73999962889999999999980997169998870016665-57634367614
No 183
>3cc8_A Putative methyltransferase; NP_977653.1, structural genomics, joint center for structural genomics, JCSG; 1.64A {Bacillus cereus atcc 10987}
Probab=64.48 E-value=7.7 Score=18.53 Aligned_cols=65 Identities=11% Similarity=0.236 Sum_probs=39.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-CCEEEEEECCCCCCCEEEEEC
Q ss_conf 69641079478899998722208956999980695551122200123323-211589753657887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-~~DI~~~~~~~~~~~D~l~gG 73 (83)
+|||+=||.|-+..-|.+. +++ |..+|+++.+.+.-+.++..... ..|+.++... -..+|+++..
T Consensus 35 ~ILDIGcG~G~~~~~l~~~----~~~-v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~~~-~~~fD~I~~~ 100 (230)
T 3cc8_A 35 EVLDIGCSSGALGAAIKEN----GTR-VSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYE-EEQFDCVIFG 100 (230)
T ss_dssp EEEEETCTTSHHHHHHHTT----TCE-EEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSC-TTCEEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHC----CCE-EEEEECCHHHHHHHHHCCCEEEEEHHHHHCCCCC-CCCEEEEEEE
T ss_conf 6999518886999999975----998-9999672566666541131233101022138888-7863588740
No 184
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=64.13 E-value=7.8 Score=18.50 Aligned_cols=65 Identities=18% Similarity=0.227 Sum_probs=36.2
Q ss_pred CEEEEECCCCCHHHH-HHHHHHHCCCCEEEEEEECCHHH-HHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECC
Q ss_conf 269641079478899-99872220895699998069555-11222001233232115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRL-DLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~-gl~~a~~~~~~~~v~a~e~d~~a-~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
||+ .|-|+||... +|.+++.+.|+++.. +|..+.. .+.++.. +-....+ .+.+.+.+.|+++-+|
T Consensus 13 mki--h~iGigg~Gms~lA~~l~~~G~~V~g-sD~~~~~~~~~L~~~-Gi~~~~g----~~~~~~~~~d~vV~Sp 79 (469)
T 1j6u_A 13 MKI--HFVGIGGIGMSAVALHEFSNGNDVYG-SNIEETERTAYLRKL-GIPIFVP----HSADNWYDPDLVIKTP 79 (469)
T ss_dssp CEE--EEETTTSHHHHHHHHHHHHTTCEEEE-ECSSCCHHHHHHHHT-TCCEESS----CCTTSCCCCSEEEECT
T ss_pred CEE--EEEEECHHHHHHHHHHHHHCCCEEEE-EECCCCHHHHHHHHC-CCEEECC----CCHHHCCCCCEEEECC
T ss_conf 779--99988699999999999968996999-829999899999988-8999889----8978879998999889
No 185
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17
Probab=63.84 E-value=4.9 Score=19.51 Aligned_cols=69 Identities=17% Similarity=0.238 Sum_probs=39.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-----------CCCCCEEEEEECCCCCCCEEEE
Q ss_conf 69641079478899998722208956999980695551122200123-----------3232115897536578871999
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----------TLIFGDIAKIKTQDIPDHDVLL 71 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-----------~~~~~DI~~~~~~~~~~~D~l~ 71 (83)
|++-+=.|.|+....+ .+....+.+..+|+|+...+.-+..++. ..+.+|-+++-.+.-.+.|+|+
T Consensus 80 ~vLiiG~G~G~~~~~l---l~~~~~~~i~~VEiDp~Vi~~a~~~f~~~~~~~~~dprv~v~~~Da~~~l~~~~~~yDvIi 156 (314)
T 1uir_A 80 RVLIVGGGEGATLREV---LKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp EEEEEECTTSHHHHHH---TTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred EEEEECCCCHHHHHHH---HHCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCCEEE
T ss_conf 7999889837999999---8659967798740218999998751830134535687069997259999974877678899
Q ss_pred ECC
Q ss_conf 868
Q gi|254780516|r 72 AGF 74 (83)
Q Consensus 72 gG~ 74 (83)
.-.
T Consensus 157 ~D~ 159 (314)
T 1uir_A 157 IDL 159 (314)
T ss_dssp EEC
T ss_pred ECC
T ss_conf 878
No 186
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=62.77 E-value=8.2 Score=18.39 Aligned_cols=72 Identities=14% Similarity=0.122 Sum_probs=39.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC----------CCCCEEEEEECCCCCCCEEEEE
Q ss_conf 696410794788999987222089569999806955511222001233----------2321158975365788719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------LIFGDIAKIKTQDIPDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~----------~~~~DI~~~~~~~~~~~D~l~g 72 (83)
||+=+=.|.|+.. +.+.+..+.+.|..+|+|+...++-+..+|.. .+.+|-++.-.+.-.+.|+|+.
T Consensus 78 ~VLiiGgG~G~~~---~~~l~~~~~~~v~~VEiD~~Vi~~a~~~~~~~~~~~~dprv~i~~~Da~~~l~~~~~~yDvIi~ 154 (275)
T 1iy9_A 78 HVLVVGGGDGGVI---REILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp EEEEESCTTCHHH---HHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred EEEEEECCCHHHH---HHHHHCCCCCEEEEEEECHHHHHHHHHHCHHHCCCCCCCCCEEEECHHHHHHHCCCCCCCEEEE
T ss_conf 5999907963999---9999659964699997088999999985723135323877438988589987505677678999
Q ss_pred CCCCC
Q ss_conf 68997
Q gi|254780516|r 73 GFPCQ 77 (83)
Q Consensus 73 G~PCq 77 (83)
-.|.+
T Consensus 155 D~~~p 159 (275)
T 1iy9_A 155 DSTEP 159 (275)
T ss_dssp SCSSC
T ss_pred ECCCC
T ss_conf 38998
No 187
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural genomics, joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=62.59 E-value=8 Score=18.45 Aligned_cols=43 Identities=16% Similarity=0.189 Sum_probs=33.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC
Q ss_conf 269641079478899998722208956999980695551122200123
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~ 49 (83)
.+|+|+=||.|.+...|... +.+ |.++|+++.+.+.-+++.+.
T Consensus 58 ~~vLDvGCG~G~~~~~la~~----g~~-v~gvD~s~~~i~~Ar~~~~~ 100 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQF----FPR-VIGLDVSKSALEIAAKENTA 100 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHH----SSC-EEEEESCHHHHHHHHHHSCC
T ss_pred CEEEEECCCCCHHHHHHHCC----CCE-EEEEECCHHHHHHHHHHCCC
T ss_conf 85899758797879997637----845-99850999999999986746
No 188
>3db2_A Putative NADPH-dependent oxidoreductase; ZP_01370612.1, structural genomics, joint center for structural genomics, JCSG; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=61.74 E-value=6.5 Score=18.90 Aligned_cols=65 Identities=5% Similarity=0.078 Sum_probs=37.8
Q ss_pred CCCCCHHHHHHHHHH-HCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEE-ECCC
Q ss_conf 079478899998722-2089569999806955511222001233232115897536578871999-8689
Q gi|254780516|r 8 FCGIGGIRLDLEQTF-NHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLL-AGFP 75 (83)
Q Consensus 8 FsG~GG~~~gl~~a~-~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~-gG~P 75 (83)
+-|+|.+....-.+. ...++++++.+|.++...+.+...|+- +.+.|+.++-.. +++|+++ +.||
T Consensus 10 iIG~G~~~~~h~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~-~~~~~~~~ll~~--~~iD~V~i~tp~ 76 (354)
T 3db2_A 10 AIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNC-AGDATMEALLAR--EDVEMVIITVPN 76 (354)
T ss_dssp EECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTC-CCCSSHHHHHHC--SSCCEEEECSCT
T ss_pred EECCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCC-CCCCCHHHHHCC--CCCCEEEECCCH
T ss_conf 9938399999999998589948999988999999999998199-833899999569--999889987977
No 189
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=61.68 E-value=7.7 Score=18.51 Aligned_cols=31 Identities=26% Similarity=0.294 Sum_probs=23.2
Q ss_pred CEEEEECCCCCHHHH-HHHHHHHCCCCEEEEEEECC
Q ss_conf 269641079478899-99872220895699998069
Q gi|254780516|r 2 LKITDLFCGIGGIRL-DLEQTFNHRNVECFFSSEIN 36 (83)
Q Consensus 2 l~v~~LFsG~GG~~~-gl~~a~~~~~~~~v~a~e~d 36 (83)
.+|+||=|+-||++. ++.+ .+...|.++|.-
T Consensus 84 g~VVDLGas~GGwTqva~~~----~ga~~V~avDvG 115 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAASQ----PNVREVKAYTLG 115 (276)
T ss_dssp EEEEEESCTTCHHHHHHHTS----TTEEEEEEECCC
T ss_pred CEEEECCCCCCCHHHHHHHH----CCCCEEEEEECC
T ss_conf 84898077887099999876----488579999827
No 190
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=60.41 E-value=9.2 Score=18.14 Aligned_cols=62 Identities=18% Similarity=0.276 Sum_probs=39.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-----CCCCCEEEEEECCCCCCCEEEEE
Q ss_conf 69641079478899998722208956999980695551122200123-----32321158975365788719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDIAKIKTQDIPDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-----~~~~~DI~~~~~~~~~~~D~l~g 72 (83)
+|||+-||-|.+...+.+ +++ |.++|+++...+..+.+.+. ....+|+.++... .+.|.++.
T Consensus 36 ~VLD~GCG~G~~~~~la~-----~~~-v~giD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~~--~~~d~v~~ 102 (243)
T 3d2l_A 36 RIADIGCGTGTATLLLAD-----HYE-VTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP--EPVDAITI 102 (243)
T ss_dssp EEEEESCTTCHHHHHHTT-----TSE-EEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS--SCEEEEEE
T ss_pred EEEEECCCCCHHHHHHHH-----CCE-EEEEECCHHHHHHHHHHHHHCCCEEEECCCCHHCCCCC--CCCCCHHH
T ss_conf 999968878799999861-----857-99998851889998876530120233101200001124--34343134
No 191
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=60.17 E-value=9.3 Score=18.11 Aligned_cols=73 Identities=15% Similarity=0.064 Sum_probs=42.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-----------CCCCCEEEEEECCCCCCCEEEE
Q ss_conf 69641079478899998722208956999980695551122200123-----------3232115897536578871999
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----------TLIFGDIAKIKTQDIPDHDVLL 71 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-----------~~~~~DI~~~~~~~~~~~D~l~ 71 (83)
+|+|.=||.|-++.-+.++... -..|.++|+++...+.-+.|... ....+|..+...+ ...+|.++
T Consensus 80 ~VLdiG~GsGy~ta~la~lvg~--~g~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gd~~~~~~~-~~~fD~I~ 156 (226)
T 1i1n_A 80 KALDVGSGSGILTACFARMVGC--TGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE-EAPYDAIH 156 (226)
T ss_dssp EEEEETCTTSHHHHHHHHHHCT--TCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG-GCCEEEEE
T ss_pred EEEEECCCCCHHHHHHHHHCCC--CCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCC-CCCEEEEE
T ss_conf 8999778889999999997088--86499986889999999999865486431023467996564566655-67601687
Q ss_pred ECCCCCC
Q ss_conf 8689975
Q gi|254780516|r 72 AGFPCQP 78 (83)
Q Consensus 72 gG~PCq~ 78 (83)
.+.+++.
T Consensus 157 ~~~~~~~ 163 (226)
T 1i1n_A 157 VGAAAPV 163 (226)
T ss_dssp ECSBBSS
T ss_pred ECCCHHH
T ss_conf 5267767
No 192
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=59.69 E-value=8.1 Score=18.41 Aligned_cols=63 Identities=17% Similarity=0.386 Sum_probs=34.5
Q ss_pred ECCCCCHHHH-HHHHHHHCCCCEEEEEEECCHHH-HHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 1079478899-99872220895699998069555-112220012332321158975365788719998689
Q gi|254780516|r 7 LFCGIGGIRL-DLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 7 LFsG~GG~~~-gl~~a~~~~~~~~v~a~e~d~~a-~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
+|-|+||... ++-+.+...|+++. .+|..+.. .+.++.. .-....+ .+.+.+.+.|+++-+|-
T Consensus 23 ~~iGiggsGms~lA~~l~~~G~~V~-gsD~~~~~~~~~L~~~-gi~v~~g----~~~~~~~~~d~vv~spg 87 (491)
T 2f00_A 23 HFVGIGGAGMGGIAEVLANEGYQIS-GSDLAPNPVTQQLMNL-GATIYFN----HRPENVRDASVVVVSSA 87 (491)
T ss_dssp EEETTTSTTHHHHHHHHHHTTCEEE-EECSSCCHHHHHHHHT-TCEEESS----CCGGGGTTCSEEEECTT
T ss_pred EEEEECHHHHHHHHHHHHHCCCEEE-EEECCCCHHHHHHHHC-CCEEECC----CCHHHCCCCCEEEECCC
T ss_conf 9998579999999999996899399-9949999799999978-8999869----89899699989998997
No 193
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=59.51 E-value=8.6 Score=18.29 Aligned_cols=69 Identities=22% Similarity=0.316 Sum_probs=38.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC----------CCCCEEEEEECCCCCCCEEEEE
Q ss_conf 696410794788999987222089569999806955511222001233----------2321158975365788719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------LIFGDIAKIKTQDIPDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~----------~~~~DI~~~~~~~~~~~D~l~g 72 (83)
||+=+=.|-|+.. +.+.++...+.+..+|+|+...++-+..+|.. .+.+|-.++-.+.-.+.|+|+.
T Consensus 111 ~VLIiGgGdG~~~---rellk~~~v~~v~~VEID~~Vi~~a~~~~~~~~~~~~dprv~i~~~Da~~~l~~~~~~yDvII~ 187 (314)
T 2b2c_A 111 RVLIIGGGDGGIL---REVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp EEEEESCTTSHHH---HHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred EEEEECCCCHHHH---HHHHHCCCCCEEEEEEECHHHHHHHHHHCHHHCCCCCCCCEEEEECHHHHHHHCCCCCCCEEEE
T ss_conf 7999889846999---9999749954589996088999999763633225456665279971089997417888888999
Q ss_pred CC
Q ss_conf 68
Q gi|254780516|r 73 GF 74 (83)
Q Consensus 73 G~ 74 (83)
-.
T Consensus 188 D~ 189 (314)
T 2b2c_A 188 DS 189 (314)
T ss_dssp CC
T ss_pred EC
T ss_conf 68
No 194
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A*
Probab=58.42 E-value=10 Score=17.95 Aligned_cols=41 Identities=15% Similarity=0.029 Sum_probs=28.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHC
Q ss_conf 69641079478899998722208956999980695551122200
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n 46 (83)
++||+-||.|.+...+...+ .+ ..|..+|+++...+.-+.+
T Consensus 27 ~vLDvGcG~G~~~~~la~~~--p~-~~vvGvD~s~~~l~~a~~~ 67 (225)
T 3p2e_A 27 VHIDLGTGDGRNIYKLAIND--QN-TFYIGIDPVKENLFDISKK 67 (225)
T ss_dssp EEEEETCTTSHHHHHHHHTC--TT-EEEEEECSCCGGGHHHHHH
T ss_pred EEEEEEEECCHHHHHHHHHC--CC-CEEEEEECCHHHHHHHHHH
T ss_conf 89992276739999999868--99-7899986788999999988
No 195
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=56.84 E-value=4.6 Score=19.64 Aligned_cols=42 Identities=7% Similarity=-0.021 Sum_probs=30.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC
Q ss_conf 6964107947889999872220895699998069555112220012
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP 48 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~ 48 (83)
|+|||=||-|....-+.. .++..|..+|+++...+..+.+..
T Consensus 58 ~vLDlGCG~G~~~~~~a~----~~~~~V~giD~S~~~i~~a~~~~~ 99 (263)
T 2a14_A 58 TLIDIGSGPTIYQVLAAC----DSFQDITLSDFTDRNREELEKWLK 99 (263)
T ss_dssp EEEESSCTTCCGGGTTGG----GTEEEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHH----HCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 899978886289999998----479768995189999999999998
No 196
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O- methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, RNA-binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} PDB: 3id5_B*
Probab=56.12 E-value=11 Score=17.74 Aligned_cols=72 Identities=15% Similarity=0.150 Sum_probs=41.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC----CCCCEEEEEECCC--CCCCEEEEECCC
Q ss_conf 2696410794788999987222089569999806955511222001233----2321158975365--788719998689
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIAKIKTQD--IPDHDVLLAGFP 75 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~----~~~~DI~~~~~~~--~~~~D~l~gG~P 75 (83)
.||+||=||.|....-+...... + -.|+++|+++...+..+.+.... ++..|..+...-. ...+|++.....
T Consensus 78 ~~VLdLG~G~G~~~~~la~~Vg~-~-G~V~aVD~s~~~l~~a~~~a~~~~n~~~v~~d~~~~~~~~~~~~~vd~i~~~~~ 155 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIEL-N-GKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIA 155 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTT-T-SEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCC
T ss_pred CEEEEECCCCCHHHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCCEEEEEEEECC
T ss_conf 99999677188999999997156-8-769999799999999997656546776301014675453777736999998525
No 197
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=55.70 E-value=11 Score=17.71 Aligned_cols=73 Identities=11% Similarity=0.164 Sum_probs=42.9
Q ss_pred CCEEEEECCCCCHHHH--HHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCCC
Q ss_conf 9269641079478899--9987222089569999806955511222001233232115897536578871999868997
Q gi|254780516|r 1 MLKITDLFCGIGGIRL--DLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQ 77 (83)
Q Consensus 1 ml~v~~LFsG~GG~~~--gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~PCq 77 (83)
|+|+. +=|+|.+.. -+..+....+...|.+++-++...+-+...++....+.|+.++-.. +++|+++=..|-+
T Consensus 2 ~i~ig--iIG~G~~~~~~hl~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~ell~~--~~~D~V~I~tp~~ 76 (345)
T 3f4l_A 2 VINCA--FIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLND--PDVKLVVVCTHAD 76 (345)
T ss_dssp CEEEE--EECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTC--TTEEEEEECSCGG
T ss_pred EEEEE--EEECCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCCEECCHHHHHCC--CCCCEEEECCCHH
T ss_conf 88499--995669999999999975999769999989889999999875999367999999569--9998899958869
No 198
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structural genomics; 1.50A {Listeria monocytogenes str}
Probab=55.20 E-value=11 Score=17.66 Aligned_cols=47 Identities=13% Similarity=0.228 Sum_probs=29.4
Q ss_pred EEEEEECCHHHHHHHHHCCCCCCC--CCEEEEEECCCCC---CCEEEEECCC
Q ss_conf 999980695551122200123323--2115897536578---8719998689
Q gi|254780516|r 29 CFFSSEINPYSVKTYQANFPNTLI--FGDIAKIKTQDIP---DHDVLLAGFP 75 (83)
Q Consensus 29 ~v~a~e~d~~a~~~y~~n~~~~~~--~~DI~~~~~~~~~---~~D~l~gG~P 75 (83)
.+..+|+|+.+.+..+.|....-. .-++.+.+..+++ +.++|+.=||
T Consensus 265 ~i~g~D~d~~ai~~a~~N~~~ag~~~~i~~~~~d~~~~~~~~~~~~iv~NPP 316 (393)
T 3k0b_A 265 NIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPP 316 (393)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCC
T ss_pred CEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCCCCCCEEEECCC
T ss_conf 3899959899999999999973870000033201977599999978998898
No 199
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=54.95 E-value=5.8 Score=19.15 Aligned_cols=65 Identities=6% Similarity=0.024 Sum_probs=39.8
Q ss_pred CCCCHHHHHHHHHH-HCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 79478899998722-20895699998069555112220012332321158975365788719998689
Q gi|254780516|r 9 CGIGGIRLDLEQTF-NHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 9 sG~GG~~~gl~~a~-~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
=|+|.+..-.-.+. ...+++.+..+|.++...+.+...|+....+.|..++-.+ +++|+++-..|
T Consensus 11 IG~G~i~~~h~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~--~~iD~V~I~tp 76 (330)
T 3e9m_A 11 MSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKD--ETIDIIYIPTY 76 (330)
T ss_dssp CSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHC--TTCSEEEECCC
T ss_pred ECCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEECCCHHHHHCC--CCCCEEEECCC
T ss_conf 9883999999999974899289999889999999999983998041999999548--99998998997
No 200
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative; 2.00A {Streptococcus agalactiae serogroup V}
Probab=54.83 E-value=4.1 Score=19.90 Aligned_cols=69 Identities=10% Similarity=0.118 Sum_probs=39.5
Q ss_pred CCCCHHHHHHHHHH-HCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEE-EECCCCCCC
Q ss_conf 79478899998722-208956999980695551122200123323211589753657887199-986899754
Q gi|254780516|r 9 CGIGGIRLDLEQTF-NHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVL-LAGFPCQPF 79 (83)
Q Consensus 9 sG~GG~~~gl~~a~-~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l-~gG~PCq~f 79 (83)
-|+|.+....-.+. ...+++++..+|.++...+.++..|+....+.|+.++-.+ +++|++ ++.||..-+
T Consensus 11 IG~G~i~~~h~~~l~~~~~~~v~~v~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~--~~~D~V~I~tp~~~H~ 81 (329)
T 3evn_A 11 VSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLAD--ESIDVIYVATINQDHY 81 (329)
T ss_dssp EBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTC--TTCCEEEECSCGGGHH
T ss_pred ECCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCEECCHHHHHCC--CCCCEEEECCCHHHHH
T ss_conf 9884999999999986899289999889999999999985998066899999628--8988899058266555
No 201
>2o4u_X Dimeric dihydrodiol dehydrogenase; NADP-binding rossmann-fold domain, predominantly anti- parallel beta sheet, oxidoreductase; 2.00A {Macaca fascicularis} PDB: 2o48_X 2poq_X*
Probab=53.98 E-value=11 Score=17.82 Aligned_cols=71 Identities=11% Similarity=0.145 Sum_probs=41.7
Q ss_pred CCCCCHHHHHHHHHH---HCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEE-EECCCCCCCC
Q ss_conf 079478899998722---208956999980695551122200123323211589753657887199-9868997543
Q gi|254780516|r 8 FCGIGGIRLDLEQTF---NHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVL-LAGFPCQPFS 80 (83)
Q Consensus 8 FsG~GG~~~gl~~a~---~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l-~gG~PCq~fS 80 (83)
.-|.|.+....-.+. ...+++.+..+|.++...+.+++.|+....+.|.+++-. -+++|++ ++.||-+.+.
T Consensus 7 iIG~G~~g~~~~~~l~~~~~~~~~l~~v~d~~~~~~~~~a~~~~~~~~~~~~~~ll~--~~~iD~v~I~tp~~~h~~ 81 (334)
T 2o4u_X 7 IVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAK--DPNVEVAYVGTQHPQHKA 81 (334)
T ss_dssp EECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHT--CTTCSEEEECCCGGGHHH
T ss_pred EECCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEECCHHHHHC--CCCCCEEEEECCCCCCHH
T ss_conf 999939999999999858588859999987999999999998399825489999956--999988999056541147
No 202
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase/DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=53.73 E-value=3.1 Score=20.53 Aligned_cols=35 Identities=23% Similarity=0.524 Sum_probs=24.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHH
Q ss_conf 6964107947889999872220895699998069555112220
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA 45 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~ 45 (83)
+++|.|+|.|...+.+ . ..++.+|+++.-...|+.
T Consensus 27 ~yvEpF~Gggav~~~~--~------~~~v~ND~~~~l~n~~~~ 61 (259)
T 1yf3_A 27 RFVDLFCGGLSVSLNV--N------GPVLANDIQEPIIEMYKR 61 (259)
T ss_dssp EEEETTCTTCTTGGGS--C------SSEEEECSCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHCC--C------CCEEEEECCHHHHHHHHH
T ss_conf 6984566678998506--8------876999578899999999
No 203
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=53.70 E-value=12 Score=17.53 Aligned_cols=73 Identities=23% Similarity=0.380 Sum_probs=42.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHH-------------CCCCCC-CCCEEEEEECCCCC--
Q ss_conf 26964107947889999872220895699998069555112220-------------012332-32115897536578--
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA-------------NFPNTL-IFGDIAKIKTQDIP-- 65 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~-------------n~~~~~-~~~DI~~~~~~~~~-- 65 (83)
.++||+-||.|.+...+.... .+.. +..+|+.+........ +..+.. +.+|..++-.+.++
T Consensus 51 p~iLeIGcG~G~~l~~lA~~~--p~~~-~iGiEi~~~~v~~~~~ri~~~~~~~a~~~~l~Ni~~~~~da~~~l~~~~~~~ 127 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAF--PEDL-ILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHS--TTSE-EEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CEEEEECCCCCHHHHHHHHHC--CCCC-EEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCC
T ss_conf 879998268998999999868--9875-8988503689999999999998747877498719999373488888751467
Q ss_pred CCEEEEECCCCC
Q ss_conf 871999868997
Q gi|254780516|r 66 DHDVLLAGFPCQ 77 (83)
Q Consensus 66 ~~D~l~gG~PCq 77 (83)
.+|.+.--||-+
T Consensus 128 s~d~v~i~FPDP 139 (246)
T 2vdv_E 128 QLSKMFFCFPDP 139 (246)
T ss_dssp CEEEEEEESCCC
T ss_pred CCCEEEEECCCC
T ss_conf 767348988988
No 204
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isoprenoid biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=53.38 E-value=4.8 Score=19.56 Aligned_cols=70 Identities=20% Similarity=0.357 Sum_probs=36.7
Q ss_pred CCEEEEECCCCCHHH-----------HHHHHHHHCCCCEEEEEE-ECCHHHHHHH----------HHCCC-C--CCCCCE
Q ss_conf 926964107947889-----------999872220895699998-0695551122----------20012-3--323211
Q gi|254780516|r 1 MLKITDLFCGIGGIR-----------LDLEQTFNHRNVECFFSS-EINPYSVKTY----------QANFP-N--TLIFGD 55 (83)
Q Consensus 1 ml~v~~LFsG~GG~~-----------~gl~~a~~~~~~~~v~a~-e~d~~a~~~y----------~~n~~-~--~~~~~D 55 (83)
|||+.=+.||+|-++ +.|+++ |+++.++. |.+. ..+. .+|.- + ..-.++
T Consensus 23 ~m~~aviLsGcG~~DGsEi~Eav~~l~~L~ra----G~~v~~~aPd~~q--~~vv~H~~g~~~~~~Rnvl~esariarg~ 96 (242)
T 3l3b_A 23 ALNSAVILAGCGHMDGSEIREAVLVMLELDRH----NVNFKCFAPNKNQ--KQVVDHKKKESVGEVRNILVESARIARGS 96 (242)
T ss_dssp -CEEEEECCCSSTTTSCCHHHHHHHHHHHHHT----TCEEEEEECSSBC--SCEEETTTTEEESCCCBHHHHHHHHTTTC
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCCC--CEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 04469998089786742297999999999988----9979999469875--51256158871324554211455324678
Q ss_pred EEEEECCCCCCCEEEE--ECCCC
Q ss_conf 5897536578871999--86899
Q gi|254780516|r 56 IAKIKTQDIPDHDVLL--AGFPC 76 (83)
Q Consensus 56 I~~~~~~~~~~~D~l~--gG~PC 76 (83)
|++++.-+..+.|.|+ ||+++
T Consensus 97 i~~l~ev~~~dyDaliiPGG~g~ 119 (242)
T 3l3b_A 97 VYDIEQIRVEEFDMLVIPGGYGV 119 (242)
T ss_dssp EEEGGGCCGGGCSEEEECCCHHH
T ss_pred CCCHHHCCCCCCCEEEECCCHHH
T ss_conf 78577889412898998897678
No 205
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=53.31 E-value=12 Score=17.60 Aligned_cols=68 Identities=18% Similarity=0.254 Sum_probs=36.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC----------CCCCEEEEEECCCCCCCEEEEE
Q ss_conf 696410794788999987222089569999806955511222001233----------2321158975365788719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------LIFGDIAKIKTQDIPDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~----------~~~~DI~~~~~~~~~~~D~l~g 72 (83)
||+=+=.|-|+.. +.+.+....+.+..+|+|+...++-+..+|.. .+.+|-.++-.+.=.+.|+|+.
T Consensus 93 ~VLiiGgG~G~~~---~e~l~~~~~~~v~~VEID~~Vi~~a~~~~~~~~~~~~d~rv~ii~~Da~~~l~~~~~~yDvIi~ 169 (296)
T 1inl_A 93 KVLIIGGGDGGTL---REVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp EEEEEECTTCHHH---HHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred EEEEECCCCHHHH---HHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHCCCCCCEEEE
T ss_conf 7999879827999---9999649977178863578999999987676224336996089961489999747887768999
Q ss_pred C
Q ss_conf 6
Q gi|254780516|r 73 G 73 (83)
Q Consensus 73 G 73 (83)
-
T Consensus 170 D 170 (296)
T 1inl_A 170 D 170 (296)
T ss_dssp E
T ss_pred E
T ss_conf 0
No 206
>2i7c_A Spermidine synthase; transferase, structural genomics consortium, SGC; HET: AAT 1PG; 1.71A {Plasmodium falciparum 3D7} PDB: 2hte_A* 3b7p_A* 2pwp_A*
Probab=52.93 E-value=12 Score=17.57 Aligned_cols=68 Identities=21% Similarity=0.246 Sum_probs=37.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC----------CCCCEEEEEECCCCCCCEEEEE
Q ss_conf 696410794788999987222089569999806955511222001233----------2321158975365788719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------LIFGDIAKIKTQDIPDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~----------~~~~DI~~~~~~~~~~~D~l~g 72 (83)
|++-+=.|.|+.. +.+.+....+.+..+|+|+.-.+.-+..++.. .+.+|-+++-.+.-.+.|+|+.
T Consensus 81 ~vLiiGgG~G~~~---~ellk~~~~~~i~~VEiD~~Vi~~a~~~f~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDvIi~ 157 (283)
T 2i7c_A 81 NVLVVGGGDGGII---RELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp EEEEEECTTSHHH---HHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred EEEEECCCCHHHH---HHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHCCCCCCEEEE
T ss_conf 4999838834999---9999749963799974789999999987465024224876528960689999746887777999
Q ss_pred C
Q ss_conf 6
Q gi|254780516|r 73 G 73 (83)
Q Consensus 73 G 73 (83)
-
T Consensus 158 D 158 (283)
T 2i7c_A 158 D 158 (283)
T ss_dssp E
T ss_pred E
T ss_conf 4
No 207
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=52.58 E-value=10 Score=17.92 Aligned_cols=67 Identities=9% Similarity=0.057 Sum_probs=37.7
Q ss_pred CCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-CCEEEEEECCCCCCCEEEEECCC
Q ss_conf 079478899998722208956999980695551122200123323-21158975365788719998689
Q gi|254780516|r 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 8 FsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
--|.||...+.-.++...+.+.+.....++...+.+...+..... ..++.. ......+.|+++-..|
T Consensus 146 IlGaGGaarai~~aL~~~g~~~i~i~~R~~~ka~~l~~~~~~~~~~~~~~~~-~~~~~~~~dlvInatp 213 (297)
T 2egg_A 146 VIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAE-AETRLAEYDIIINTTS 213 (297)
T ss_dssp EECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHH-HHHTGGGCSEEEECSC
T ss_pred EECCCHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCHHHHH-HHCCCCCCCEECCCCC
T ss_conf 9766276899999999739851000026699999999860114654012444-4212330156325576
No 208
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=50.78 E-value=14 Score=17.28 Aligned_cols=66 Identities=23% Similarity=0.317 Sum_probs=37.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-------CCCEEEEEECCCCCCCEEEEEC
Q ss_conf 6964107947889999872220895699998069555112220012332-------3211589753657887199986
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFGDIAKIKTQDIPDHDVLLAG 73 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-------~~~DI~~~~~~~~~~~D~l~gG 73 (83)
||+|+=||.|+....+... .+.+ |..+|+++...+.-+.+..... ..+|+.++...+ ..+|+++.-
T Consensus 64 ~VLDiGcG~G~~~~~~~~~---~~~~-v~gvD~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~-~~fD~v~~~ 136 (273)
T 3bus_A 64 RVLDVGCGIGKPAVRLATA---RDVR-VTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFED-ASFDAVWAL 136 (273)
T ss_dssp EEEEESCTTSHHHHHHHHH---SCCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCT-TCEEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHH---CCCE-EEEEECCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC-CCCCEEEEC
T ss_conf 8999789799889999984---5988-99997848889999999987177732100134434688777-762489864
No 209
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium LT2}
Probab=49.62 E-value=11 Score=17.75 Aligned_cols=65 Identities=20% Similarity=0.237 Sum_probs=38.8
Q ss_pred CCCCHHHHH-HHHHHH-CCCCEEEEEEECCHHHHHHHHHCCCC-CCCCCEEEEEECCCCCCCEEEE-ECCC
Q ss_conf 794788999-987222-08956999980695551122200123-3232115897536578871999-8689
Q gi|254780516|r 9 CGIGGIRLD-LEQTFN-HRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPDHDVLL-AGFP 75 (83)
Q Consensus 9 sG~GG~~~g-l~~a~~-~~~~~~v~a~e~d~~a~~~y~~n~~~-~~~~~DI~~~~~~~~~~~D~l~-gG~P 75 (83)
-|+|.+... ++.+.. ..+++.+..+|.++...+.+...|+- ...+.|+.++-.+ +++|+++ +.||
T Consensus 29 IG~G~ig~~h~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~y~~~~ell~~--~~iDaV~I~Tp~ 97 (357)
T 3ec7_A 29 VGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLIND--KDVEVVIITASN 97 (357)
T ss_dssp ECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHC--TTCCEEEECSCG
T ss_pred ECCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHCC--CCCCEEEECCCC
T ss_conf 998499999999998469997899997899999999999839998311999999659--998889988985
No 210
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=47.63 E-value=15 Score=17.01 Aligned_cols=68 Identities=6% Similarity=0.064 Sum_probs=43.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC--------CCCEEEEEECCCC--CCCEEEEE
Q ss_conf 6964107947889999872220895699998069555112220012332--------3211589753657--88719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--------IFGDIAKIKTQDI--PDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~--------~~~DI~~~~~~~~--~~~D~l~g 72 (83)
+|+|+=+|+|-..+.+-++....+ .+..+|.++...+.-+.|+...- +.+|..++-. ++ +.+|+++-
T Consensus 59 ~vlEiGt~~G~stl~la~al~~~g--~l~tIE~~~e~~~~Ar~~~~~ag~~~~rv~~i~gda~e~L~-~l~~~~fDlVfi 135 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNT--TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMS-RLANDSYQLVFG 135 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTS--EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGG-GSCTTCEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHCCCCC--EEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHH-HHCCCCCCEEEE
T ss_conf 899972805799999998479997--89999899999999999999668876246773277899878-743478777997
Q ss_pred C
Q ss_conf 6
Q gi|254780516|r 73 G 73 (83)
Q Consensus 73 G 73 (83)
-
T Consensus 136 D 136 (221)
T 3dr5_A 136 Q 136 (221)
T ss_dssp C
T ss_pred C
T ss_conf 5
No 211
>1zh8_A Oxidoreductase; TM0312, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: MSE NAP; 2.50A {Thermotoga maritima MSB8} SCOP: c.2.1.3 d.81.1.5
Probab=47.28 E-value=12 Score=17.64 Aligned_cols=67 Identities=12% Similarity=0.063 Sum_probs=40.0
Q ss_pred CCCCCHHHHHH-HHHHHC--CCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEE-EECCCC
Q ss_conf 07947889999-872220--8956999980695551122200123323211589753657887199-986899
Q gi|254780516|r 8 FCGIGGIRLDL-EQTFNH--RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVL-LAGFPC 76 (83)
Q Consensus 8 FsG~GG~~~gl-~~a~~~--~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l-~gG~PC 76 (83)
+-|+|.+.... -.+..+ ..++.+..+|.++...+.+...++....+.|..++-.+ +++|++ ++.||-
T Consensus 23 iIG~G~~g~~~h~~~l~~~~~~~~l~ai~d~~~~~~~~~~~~~~~~~~~~~~~ell~~--~~iD~V~I~tp~~ 93 (340)
T 1zh8_A 23 IVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLES--GLVDAVDLTLPVE 93 (340)
T ss_dssp EECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHS--SCCSEEEECCCGG
T ss_pred EECCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCEECCHHHHHCC--CCCCEEEECCCCH
T ss_conf 9958899999999999728997699999899999999999983998353889999559--9999899138703
No 212
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=47.22 E-value=16 Score=16.98 Aligned_cols=74 Identities=15% Similarity=0.130 Sum_probs=42.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHH-CC-C-CEEEEEEECCHHHHHHHHHCCCCCCCCCEE----EEEECC----------CC
Q ss_conf 2696410794788999987222-08-9-569999806955511222001233232115----897536----------57
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFN-HR-N-VECFFSSEINPYSVKTYQANFPNTLIFGDI----AKIKTQ----------DI 64 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~-~~-~-~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI----~~~~~~----------~~ 64 (83)
+||||+=||.|.+...+-+... .. . .-.+.++|.++...+..+.+........++ .....+ .-
T Consensus 54 ~~VLdiGcG~G~~~~~il~~l~~~~~~~~~~~~~vD~s~~~l~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (292)
T 2aot_A 54 IKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKEL 133 (292)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTCC
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHCCCHHHCCCCC
T ss_conf 86999879799778999998887447877759999898899999999988741335530110235165404422155678
Q ss_pred CCCEEEEECCC
Q ss_conf 88719998689
Q gi|254780516|r 65 PDHDVLLAGFP 75 (83)
Q Consensus 65 ~~~D~l~gG~P 75 (83)
..+|++++..-
T Consensus 134 ~~fD~I~~~~~ 144 (292)
T 2aot_A 134 QKWDFIHMIQM 144 (292)
T ss_dssp CCEEEEEEESC
T ss_pred CCEEEEEECCH
T ss_conf 98679997680
No 213
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=45.55 E-value=16 Score=16.86 Aligned_cols=65 Identities=18% Similarity=0.265 Sum_probs=38.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCC--CCEEEEECCC
Q ss_conf 696410794788999987222089569999806955511222001233232115897536578--8719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP--DHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~--~~D~l~gG~P 75 (83)
||+|+=||.|.+..-+... +++ +..+|+++.+.+.-+.+++.. ..|..+. ...++ .+|+++..--
T Consensus 44 ~vLDiGCG~G~~~~~l~~~----g~~-v~GiD~s~~~i~~a~~~~~~~--~~~~~~~-~~~~~~~~fD~V~~~~v 110 (240)
T 3dli_A 44 RVLDIGCGRGEFLELCKEE----GIE-SIGVDINEDMIKFCEGKFNVV--KSDAIEY-LKSLPDKYLDGVMISHF 110 (240)
T ss_dssp CEEEETCTTTHHHHHHHHH----TCC-EEEECSCHHHHHHHHTTSEEE--CSCHHHH-HHTSCTTCBSEEEEESC
T ss_pred EEEEECCCCCHHHHHHHHC----CCE-EEEEECCHHHHHHHHHHCCCC--HHHHHHH-HCCCCCCCCCEEEEECE
T ss_conf 6999738785999999977----995-999967707878876511100--1006664-02354347658876210
No 214
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=44.80 E-value=14 Score=17.29 Aligned_cols=63 Identities=13% Similarity=0.271 Sum_probs=40.2
Q ss_pred CCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEEC---CCCCCCEEEEEC
Q ss_conf 79478899998722208956999980695551122200123323211589753---657887199986
Q gi|254780516|r 9 CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT---QDIPDHDVLLAG 73 (83)
Q Consensus 9 sG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~---~~~~~~D~l~gG 73 (83)
+|.|-+...+-+.+...++++ ..+|.|+...+.++... ...+++|.++.+. -.+.+.|.++..
T Consensus 12 iG~G~~G~~la~~L~~~g~~v-vviD~d~~~~~~~~~~g-~~~v~gD~td~~~L~~a~i~~a~~vii~ 77 (144)
T 2hmt_A 12 IGLGRFGGSIVKELHRMGHEV-LAVDINEEKVNAYASYA-THAVIANATEENELLSLGIRNFEYVIVA 77 (144)
T ss_dssp ECCSHHHHHHHHHHHHTTCCC-EEEESCHHHHHTTTTTC-SEEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred ECCCHHHHHHHHHHHHCCCEE-EEEECCHHHHHHHHHCC-CEEEEECCCCHHHHHHCCCCCCCEEEEE
T ss_conf 887899999999999889919-99979679999998539-7499931788888863022349999998
No 215
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genomics, protein structure initiative, PSI; HET: NAD; 1.95A {Listeria innocua}
Probab=44.14 E-value=18 Score=16.72 Aligned_cols=68 Identities=13% Similarity=0.088 Sum_probs=40.2
Q ss_pred ECCCCCHHHHHHHHHHH-CCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEE-EECCCCCC
Q ss_conf 10794788999987222-08956999980695551122200123323211589753657887199-98689975
Q gi|254780516|r 7 LFCGIGGIRLDLEQTFN-HRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVL-LAGFPCQP 78 (83)
Q Consensus 7 LFsG~GG~~~gl~~a~~-~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l-~gG~PCq~ 78 (83)
.+-|+|.+..-.-.+.. ..+++++..+|.++.+.+..+.. +.+.+.|+.++-.+ +++|++ ++.||-.-
T Consensus 9 giIG~G~~g~~h~~~~~~~~~~~l~av~d~~~~~~~~~~~~--~~~~~~~~~ell~~--~~iD~V~i~tp~~~h 78 (359)
T 3e18_A 9 VIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQK--GLKIYESYEAVLAD--EKVDAVLIATPNDSH 78 (359)
T ss_dssp EEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTT--TCCBCSCHHHHHHC--TTCCEEEECSCGGGH
T ss_pred EEECCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHC--CCCCCCCHHHHHCC--CCCCEEEECCCCHHH
T ss_conf 99946799999999998589958999988999999999862--99701999999559--998989987880552
No 216
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=44.00 E-value=15 Score=17.04 Aligned_cols=34 Identities=12% Similarity=0.475 Sum_probs=20.4
Q ss_pred CCEEEEEC-CCCCHHHH--HHHHHHHCCCCEEEEEEECC
Q ss_conf 92696410-79478899--99872220895699998069
Q gi|254780516|r 1 MLKITDLF-CGIGGIRL--DLEQTFNHRNVECFFSSEIN 36 (83)
Q Consensus 1 ml~v~~LF-sG~GG~~~--gl~~a~~~~~~~~v~a~e~d 36 (83)
|=|-+-.| ||+||++. .+++... +.+.++..|.-
T Consensus 4 m~~pIgvfDSGvGGLsvl~~l~~~lP--~~~~iY~~D~~ 40 (269)
T 3ist_A 4 MKQAIGFIDSGVGGLTVVREVLKQLP--HEQVYYLGDTA 40 (269)
T ss_dssp SCCCEEEEESSSTTHHHHHHHHHHCT--TCCEEEEECGG
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHCC--CCCEEEEECCC
T ss_conf 77968999589757999999999789--99989994488
No 217
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S- adenosylmethionine-dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=42.16 E-value=19 Score=16.56 Aligned_cols=71 Identities=13% Similarity=0.179 Sum_probs=45.1
Q ss_pred EEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHH-----CCCCCC-CCCEEEEEECCCCC--CCEEEEECCC
Q ss_conf 964107947889999872220895699998069555112220-----012332-32115897536578--8719998689
Q gi|254780516|r 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA-----NFPNTL-IFGDIAKIKTQDIP--DHDVLLAGFP 75 (83)
Q Consensus 4 v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~-----n~~~~~-~~~DI~~~~~~~~~--~~D~l~gG~P 75 (83)
++|+=||-|.+...+.+.. .+.. +.++|+.+...+.-.. +.++.. ..+|+.++. +.++ .+|.+.--+|
T Consensus 45 iLEIGcG~G~~~~~lA~~~--P~~~-~igiD~~~~~v~~a~~~~~~~~l~Nv~~~~~da~~l~-~~~~~~~~d~v~~~fP 120 (214)
T 1yzh_A 45 HVEVGSGKGAFVSGMAKQN--PDIN-YIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLT-DYFEDGEIDRLYLNFS 120 (214)
T ss_dssp EEEESCTTSHHHHHHHHHC--TTSE-EEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGG-GTSCTTCCSEEEEESC
T ss_pred EEEEEEECCHHHHHHHHHC--CCCC-EEEEECCHHHHHHHHHHHHHHCCCCEEEEECCHHHHH-HHCCCCEEEEEECCCC
T ss_conf 8999410869999999978--9997-7974077888999999999839986445523698874-2125774311112467
Q ss_pred CCC
Q ss_conf 975
Q gi|254780516|r 76 CQP 78 (83)
Q Consensus 76 Cq~ 78 (83)
..-
T Consensus 121 dPw 123 (214)
T 1yzh_A 121 DPW 123 (214)
T ss_dssp CCC
T ss_pred CCC
T ss_conf 866
No 218
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A* 3evg_A*
Probab=41.59 E-value=19 Score=16.51 Aligned_cols=31 Identities=29% Similarity=0.271 Sum_probs=21.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEC
Q ss_conf 2696410794788999987222089569999806
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI 35 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~ 35 (83)
.+|+||=|+-||++.-+... .+..-|.+.++
T Consensus 84 g~VVDLGcAPGGWSQvaa~~---~~v~~V~G~~i 114 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGL---KNVREVKGLTK 114 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTS---TTEEEEEEECC
T ss_pred CEEEECCCCCCCHHHHHHHH---CCCCCEEEEEE
T ss_conf 86887376898389999862---26662168994
No 219
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=41.53 E-value=16 Score=16.86 Aligned_cols=65 Identities=12% Similarity=0.114 Sum_probs=39.2
Q ss_pred ECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC-CCCCEEEEEE-----CCCCCCCEEEEE
Q ss_conf 10794788999987222089569999806955511222001233-2321158975-----365788719998
Q gi|254780516|r 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK-----TQDIPDHDVLLA 72 (83)
Q Consensus 7 LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~-~~~~DI~~~~-----~~~~~~~D~l~g 72 (83)
.--|.+|+..++-+.+...|++++. ++.++...+......++. .+..|+++.+ .++++.+|+|+-
T Consensus 12 ITGas~GIG~aia~~la~~Ga~V~~-~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVn 82 (244)
T 1cyd_A 12 VTGAGKGIGRDTVKALHASGAKVVA-VTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVN 82 (244)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEE
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEE
T ss_conf 9488868999999999987999999-9798899999998648974999838999999999985499989998
No 220
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum atcc 13032}
Probab=40.70 E-value=20 Score=16.43 Aligned_cols=70 Identities=11% Similarity=0.079 Sum_probs=40.2
Q ss_pred CEEEEECCCCCHHHHH-HHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEE-ECCCC
Q ss_conf 2696410794788999-987222089569999806955511222001233232115897536578871999-86899
Q gi|254780516|r 2 LKITDLFCGIGGIRLD-LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLL-AGFPC 76 (83)
Q Consensus 2 l~v~~LFsG~GG~~~g-l~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~-gG~PC 76 (83)
||+. .-|.|-+... +..+....+++.++.+|.++.+.+.++..+. .+.+.|..++-.+ +++|+++ +.||-
T Consensus 5 irvg--iIG~G~~g~~h~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~-~~~~~~~~ell~~--~~iD~V~I~tp~~ 76 (344)
T 3euw_A 5 LRIA--LFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANG-AEAVASPDEVFAR--DDIDGIVIGSPTS 76 (344)
T ss_dssp EEEE--EECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTT-CEEESSHHHHTTC--SCCCEEEECSCGG
T ss_pred EEEE--EECCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHC-CCEECCHHHHHCC--CCCCEEEECCCCC
T ss_conf 7798--999729999999999718994899998899999999999849-9778999999648--9988899715431
No 221
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=39.94 E-value=19 Score=16.59 Aligned_cols=65 Identities=14% Similarity=0.201 Sum_probs=38.1
Q ss_pred CCCCHHHHH--HHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEE-ECCCC
Q ss_conf 794788999--987222089569999806955511222001233232115897536578871999-86899
Q gi|254780516|r 9 CGIGGIRLD--LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLL-AGFPC 76 (83)
Q Consensus 9 sG~GG~~~g--l~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~-gG~PC 76 (83)
-|+|.+... +...-...+++.++.+|.++...+.+...|+- +.+.|+.++-.+ +++|+++ +.||-
T Consensus 8 IG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~-~~~~~~~ell~~--~~vD~V~i~tp~~ 75 (387)
T 3moi_A 8 CGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGI-PVFATLAEMMQH--VQMDAVYIASPHQ 75 (387)
T ss_dssp ECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTC-CEESSHHHHHHH--SCCSEEEECSCGG
T ss_pred ECCCHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCC-CEECCHHHHHCC--CCCCEEEECCCCH
T ss_conf 9896999999999997397919999987999999999998599-858999999659--9998899908967
No 222
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=39.85 E-value=21 Score=16.36 Aligned_cols=70 Identities=16% Similarity=0.235 Sum_probs=39.0
Q ss_pred CCEEEEECCCCCHHHHH--HHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCCC
Q ss_conf 92696410794788999--987222089569999806955511222001233232115897536578871999868997
Q gi|254780516|r 1 MLKITDLFCGIGGIRLD--LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQ 77 (83)
Q Consensus 1 ml~v~~LFsG~GG~~~g--l~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~PCq 77 (83)
+||+. .-|+|.+... +...-...+++.++.+|.++...+ ..+++...+.|..++-. -+++|+++-..|-.
T Consensus 7 ~irvg--iIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~---~~~~~~~~~~~~~ell~--~~~iD~V~I~tp~~ 78 (364)
T 3e82_A 7 TINIA--LIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVK---RDLPDVTVIASPEAAVQ--HPDVDLVVIASPNA 78 (364)
T ss_dssp CEEEE--EECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH---HHCTTSEEESCHHHHHT--CTTCSEEEECSCGG
T ss_pred CCEEE--EECCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH---HHCCCCCEECCHHHHHC--CCCCCEEEECCCHH
T ss_conf 88599--994819999999999971989589999889899999---64779975799999955--99999899828778
No 223
>1r18_A Protein-L-isoaspartate(D-aspartate)-O- methyltransferase; isomerization, protein repair, S- adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=39.78 E-value=21 Score=16.36 Aligned_cols=47 Identities=19% Similarity=0.182 Sum_probs=32.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCC---EEEEEEECCHHHHHHHHHCCC
Q ss_conf 26964107947889999872220895---699998069555112220012
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNV---ECFFSSEINPYSVKTYQANFP 48 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~---~~v~a~e~d~~a~~~y~~n~~ 48 (83)
.||++.=||.|-++.-+.++....+. ..|.++|+++...+.-+.|+.
T Consensus 86 ~~VLeIG~GtGy~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~A~~~l~ 135 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLN 135 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHH
T ss_conf 88999579977999999998533157776689999478999999999997
No 224
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=39.49 E-value=21 Score=16.33 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=28.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHC
Q ss_conf 69641079478899998722208956999980695551122200
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n 46 (83)
+++||=||.|.+.+-+... .+...++.+|+.+...+.-+.+
T Consensus 245 ~fLDLGCG~G~vvl~aA~~---~g~~~viGIDis~~~l~~A~~~ 285 (433)
T 1u2z_A 245 TFMDLGSGVGNCVVQAALE---CGCALSFGCEIMDDASDLTILQ 285 (433)
T ss_dssp EEEEESCTTSHHHHHHHHH---HCCSEEEEEECCHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH---CCCCEEEEEECCHHHHHHHHHH
T ss_conf 8997489998999999997---5998799997999999999999
No 225
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=39.31 E-value=21 Score=16.32 Aligned_cols=43 Identities=23% Similarity=0.448 Sum_probs=31.2
Q ss_pred CEEEEECCCCCHHH--HHHHHHHHCCCCEEEEEEECCHHHHHHHHHCC
Q ss_conf 26964107947889--99987222089569999806955511222001
Q gi|254780516|r 2 LKITDLFCGIGGIR--LDLEQTFNHRNVECFFSSEINPYSVKTYQANF 47 (83)
Q Consensus 2 l~v~~LFsG~GG~~--~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~ 47 (83)
.++-|-|||.|.+- +||- ..--+.-+.++|+|+.+.+.-++|.
T Consensus 53 ~tlwDPCCGsgYlLTvlgLL---h~~~l~~v~aSDVd~~al~LA~~NL 97 (250)
T 1o9g_A 53 VTLWDPCCGSGYLLTVLGLL---HRRSLRQVIASDVDPAPLELAAKNL 97 (250)
T ss_dssp EEEEETTCTTSHHHHHHHHH---TGGGEEEEEEEESCHHHHHHHHHHH
T ss_pred CEEECCCCCCHHHHHHHHHH---CHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 30430577720899999884---3057777773358878999988522
No 226
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=39.24 E-value=21 Score=16.31 Aligned_cols=70 Identities=21% Similarity=0.291 Sum_probs=39.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC----------CCCCEEEEEECCC-CCCCEEEE
Q ss_conf 696410794788999987222089569999806955511222001233----------2321158975365-78871999
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------LIFGDIAKIKTQD-IPDHDVLL 71 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~----------~~~~DI~~~~~~~-~~~~D~l~ 71 (83)
||+=+=.|-|+.. +...+....+.+..+|+|+...++-+..+|.. .+++|-.+.-.+. -...|+|+
T Consensus 123 rVLIIGgGdG~~~---revlk~~~v~~v~~VEID~~Vi~~a~~~fp~~~~~~~dprv~iii~Dg~~~l~~~~~~~yDvII 199 (334)
T 1xj5_A 123 KVLVIGGGDGGVL---REVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp EEEEETCSSSHHH---HHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred EEEEECCCCHHHH---HHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHCCCCCCCEEE
T ss_conf 6999889948999---9999749965335750589999999975344302357998799986279997515335667799
Q ss_pred ECCC
Q ss_conf 8689
Q gi|254780516|r 72 AGFP 75 (83)
Q Consensus 72 gG~P 75 (83)
.-.+
T Consensus 200 vD~~ 203 (334)
T 1xj5_A 200 VDSS 203 (334)
T ss_dssp ECCC
T ss_pred EECC
T ss_conf 9789
No 227
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=39.02 E-value=21 Score=16.29 Aligned_cols=69 Identities=12% Similarity=0.203 Sum_probs=40.1
Q ss_pred CCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCC----CCCEEEEECCCC
Q ss_conf 079478899998722208956999980695551122200123323211589753657----887199986899
Q gi|254780516|r 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI----PDHDVLLAGFPC 76 (83)
Q Consensus 8 FsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~----~~~D~l~gG~PC 76 (83)
--|.||...+.-.+....+.+.+.....++...+.+...+........+..+....+ .+.|+++-..|.
T Consensus 132 ilGaGGaarai~~al~~~~~~~i~i~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliINaTp~ 204 (283)
T 3jyo_A 132 QVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPM 204 (283)
T ss_dssp EECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSST
T ss_pred EECCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHCCCCCCCCCC
T ss_conf 9666616788999999749860000136789999999999765065522022412076665431454577777
No 228
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center for structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=38.27 E-value=22 Score=16.23 Aligned_cols=65 Identities=17% Similarity=0.189 Sum_probs=38.0
Q ss_pred CCCCCHHHHH--HHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCCC
Q ss_conf 0794788999--987222089569999806955511222001233232115897536578871999868997
Q gi|254780516|r 8 FCGIGGIRLD--LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQ 77 (83)
Q Consensus 8 FsG~GG~~~g--l~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~PCq 77 (83)
+-|+|.+... +.......+++.+..+|.++... +..++..+.+.|..++-. -+++|+++=..|-+
T Consensus 12 iIG~G~~~~~~h~~~~~~~~~~~lvav~d~~~~~~---~~~~~~~~~~~~~~~ll~--~~~iD~V~i~tp~~ 78 (352)
T 3kux_A 12 LLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKV---HADWPAIPVVSDPQMLFN--DPSIDLIVIPTPND 78 (352)
T ss_dssp EECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHH---HTTCSSCCEESCHHHHHH--CSSCCEEEECSCTT
T ss_pred EECCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHH---HHHCCCCCEECCHHHHHC--CCCCCEEEECCCHH
T ss_conf 99587999999999984499839999989899999---974699976898999956--99999899888688
No 229
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=38.00 E-value=21 Score=16.34 Aligned_cols=64 Identities=13% Similarity=0.255 Sum_probs=41.2
Q ss_pred ECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-CCCEEEEEE---------CCCCCCCEEEE
Q ss_conf 107947889999872220895699998069555112220012332-321158975---------36578871999
Q gi|254780516|r 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK---------TQDIPDHDVLL 71 (83)
Q Consensus 7 LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-~~~DI~~~~---------~~~~~~~D~l~ 71 (83)
..-|.+|+..++-+.+-..|++++ .++.++...+..+...++.. +..|+++.. .+++..+|+|+
T Consensus 14 ITGas~GIG~aiA~~la~~Ga~V~-i~~r~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLV 87 (270)
T 1yde_A 14 VTGGGRGIGAGIVRAFVNSGARVV-ICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 87 (270)
T ss_dssp EETCSSHHHHHHHHHHHHTTCEEE-EEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred EECCCCHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 948888899999999998799999-99799899999998669977998207999999999999999749998899
No 230
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reductase family; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus HB8}
Probab=37.47 E-value=16 Score=16.87 Aligned_cols=62 Identities=11% Similarity=0.150 Sum_probs=38.1
Q ss_pred CCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-CCCEEEEEE---------CCCCCCCEEEEE
Q ss_conf 947889999872220895699998069555112220012332-321158975---------365788719998
Q gi|254780516|r 10 GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK---------TQDIPDHDVLLA 72 (83)
Q Consensus 10 G~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-~~~DI~~~~---------~~~~~~~D~l~g 72 (83)
|.+|+..++-+.+-..|+++ ..++.++...+......++.. ...|+++.+ .++++.+|+|+-
T Consensus 13 as~GIG~a~a~~la~~G~~V-~~~~r~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvn 84 (234)
T 2ehd_A 13 ASRGIGEATARLLHAKGYRV-GLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN 84 (234)
T ss_dssp TTSHHHHHHHHHHHHTTCEE-EEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCHHHHHHHHHHHHCCCEE-EEEECCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 67499999999999879999-9998999999999998568659965679899999999999997599979998
No 231
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=37.45 E-value=23 Score=16.16 Aligned_cols=63 Identities=16% Similarity=0.268 Sum_probs=34.0
Q ss_pred ECCCCCHHHHH-HHHHHHCCCCEEEEEEECCHH-HHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 10794788999-987222089569999806955-5112220012332321158975365788719998689
Q gi|254780516|r 7 LFCGIGGIRLD-LEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 7 LFsG~GG~~~g-l~~a~~~~~~~~v~a~e~d~~-a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
+|-|+||.... |.+.+.+.|+++. .+|..+. ..+.++.. .-....+ .+.+.+.+.|+++-+|-
T Consensus 22 ~~iGiggsG~s~lA~~l~~~G~~V~-~~D~~~~~~~~~L~~~-gi~~~~g----~~~~~~~~~d~vV~Spg 86 (475)
T 1p3d_A 22 HFIGIGGAGMSGIAEILLNEGYQIS-GSDIADGVVTQRLAQA-GAKIYIG----HAEEHIEGASVVVVSSA 86 (475)
T ss_dssp EEETTTSTTHHHHHHHHHHHTCEEE-EEESCCSHHHHHHHHT-TCEEEES----CCGGGGTTCSEEEECTT
T ss_pred EEEEECHHHHHHHHHHHHHCCCEEE-EEECCCCHHHHHHHHC-CCEEECC----CCHHHCCCCCEEEECCC
T ss_conf 9998469999999999996889499-9908999799999978-7999879----99899599999998997
No 232
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransferase, viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=37.45 E-value=23 Score=16.16 Aligned_cols=17 Identities=35% Similarity=0.520 Sum_probs=14.1
Q ss_pred CEEEEECCCCCHHHHHH
Q ss_conf 26964107947889999
Q gi|254780516|r 2 LKITDLFCGIGGIRLDL 18 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl 18 (83)
.+|+||.|+.||++.-+
T Consensus 83 g~VVDLG~aPGGWSQva 99 (300)
T 3eld_A 83 GRVLDLGCGRGGWSYYA 99 (300)
T ss_dssp EEEEEETCTTCHHHHHH
T ss_pred CEEEEECCCCCHHHHHH
T ss_conf 83898377896499999
No 233
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=36.87 E-value=23 Score=16.11 Aligned_cols=69 Identities=13% Similarity=0.207 Sum_probs=38.7
Q ss_pred CCEEEEECCCCCHHHHH--HHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCC
Q ss_conf 92696410794788999--98722208956999980695551122200123323211589753657887199986899
Q gi|254780516|r 1 MLKITDLFCGIGGIRLD--LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPC 76 (83)
Q Consensus 1 ml~v~~LFsG~GG~~~g--l~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~PC 76 (83)
|||+. +-|.|.+... +...-...+++++..+|.++... +..+++...+.|+.++-.. +++|.++=..|-
T Consensus 5 ~lrvg--iiG~G~~g~~~h~~~~~~~~~~~ivav~d~~~~~a---~~~~~~~~~~~~~~ell~~--~~iDaV~I~tp~ 75 (362)
T 3fhl_A 5 IIKTG--LAAFGMSGQVFHAPFISTNPHFELYKIVERSKELS---KERYPQASIVRSFKELTED--PEIDLIVVNTPD 75 (362)
T ss_dssp CEEEE--ESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGG---GTTCTTSEEESCSHHHHTC--TTCCEEEECSCG
T ss_pred CEEEE--EECCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHH---HHHCCCCCCCCCHHHHHCC--CCCCEEEECCCC
T ss_conf 75999--99368999999999998398929999984999999---9767899843999999649--999889994894
No 234
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A*
Probab=36.80 E-value=20 Score=16.46 Aligned_cols=42 Identities=12% Similarity=-0.005 Sum_probs=29.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC
Q ss_conf 6964107947889999872220895699998069555112220012
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP 48 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~ 48 (83)
|+||+=||.|.+..-+. ......|..+|+++...+..+.+..
T Consensus 59 ~vLDlGCG~G~~~~~l~----~~~~~~V~giD~S~~~i~~a~~~~~ 100 (265)
T 2i62_A 59 LLIDIGSGPTIYQLLSA----CESFTEIIVSDYTDQNLWELQKWLK 100 (265)
T ss_dssp EEEEESCTTCCGGGTTG----GGTEEEEEEEESCHHHHHHHHHHHT
T ss_pred EEEEECCCCCHHHHHHH----HHCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 89996787767699999----7219989995699999999999987
No 235
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=36.56 E-value=24 Score=16.08 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=20.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECC
Q ss_conf 26964107947889999872220895699998069
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN 36 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d 36 (83)
-+|+||-||-||++.-+.. ..+...|.+..+-
T Consensus 76 g~vvDlg~~~Ggws~~~~~---~~~v~~V~G~tlG 107 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAAS---RPHVMDVRAYTLG 107 (265)
T ss_dssp EEEEEESCTTSHHHHHHHT---STTEEEEEEECCC
T ss_pred CEEEEECCCCCCHHHHHHH---HCCCCEEEEEEEC
T ss_conf 8288806788718999976---3376546778945
No 236
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, protein structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=35.29 E-value=24 Score=16.05 Aligned_cols=66 Identities=14% Similarity=0.194 Sum_probs=41.1
Q ss_pred CCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEEC---CCCCCCEEEEECCC
Q ss_conf 079478899998722208956999980695551122200123323211589753---65788719998689
Q gi|254780516|r 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT---QDIPDHDVLLAGFP 75 (83)
Q Consensus 8 FsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~---~~~~~~D~l~gG~P 75 (83)
-+|.|-+...+-+.+...+.++ ..+|.|+...+.++.. .-..++||.++... -.+.+.+.++...|
T Consensus 12 I~G~g~~g~~l~~~L~~~~~~v-vvId~d~~~~~~~~~~-g~~~i~GD~~~~~~L~~a~i~~a~~vi~~~~ 80 (140)
T 3fwz_A 12 LVGYGRVGSLLGEKLLASDIPL-VVIETSRTRVDELRER-GVRAVLGNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp EECCSHHHHHHHHHHHHTTCCE-EEEESCHHHHHHHHHT-TCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred EECCCHHHHHHHHHHHHCCCCE-EEEECCCHHHHHHHHC-CCEEEECCCCCHHHHHHHCHHHHCEEEECCC
T ss_conf 9896889999999999789978-9998880775015653-9658851589999999727445189999879
No 237
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme structure, ATP-binding, nucleotide-binding; HET: SAM; 1.70A {Yokose virus}
Probab=33.92 E-value=26 Score=15.85 Aligned_cols=32 Identities=25% Similarity=0.352 Sum_probs=23.3
Q ss_pred CEEEEECCCCCHHHH-HHHHHHHCCCCEEEEEEECCH
Q ss_conf 269641079478899-998722208956999980695
Q gi|254780516|r 2 LKITDLFCGIGGIRL-DLEQTFNHRNVECFFSSEINP 37 (83)
Q Consensus 2 l~v~~LFsG~GG~~~-gl~~a~~~~~~~~v~a~e~d~ 37 (83)
.+|+||=|+-||++. ++.+ .+..-|.++|+-.
T Consensus 92 g~VVDLGaapGGWSqva~~~----~g~~~V~gvDvG~ 124 (282)
T 3gcz_A 92 GIVVDLGCGRGGWSYYAASL----KNVKKVMAFTLGV 124 (282)
T ss_dssp EEEEEETCTTCHHHHHHHTS----TTEEEEEEECCCC
T ss_pred CEEEECCCCCCCHHHHHHHH----CCCCEEEEEEECC
T ss_conf 83887377898489999875----3886799998178
No 238
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=32.78 E-value=27 Score=15.75 Aligned_cols=70 Identities=11% Similarity=0.141 Sum_probs=39.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-CCCCCEEEEEECC-------CCCCCEEEEE-
Q ss_conf 269641079478899998722208956999980695551122200123-3232115897536-------5788719998-
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ-------DIPDHDVLLA- 72 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-~~~~~DI~~~~~~-------~~~~~D~l~g- 72 (83)
.+++||.|+.||+..-+.+... ....++++|..+- + ..++ ..+.+|+.+.... .-.++|++++
T Consensus 24 ~~vlDLg~aPGgw~q~~~~~~~--~~~~v~~vd~~~~--~----~i~~~~~~~gd~~~~~~~~~~~~~~~~~~~DlVlSD 95 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIG--GKGRIIACDLLPM--D----PIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSD 95 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHC--TTCEEEEEESSCC--C----CCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CEEEEEECCCCCCEEEEEEECC--CCCEEEEEECCCC--C----CCCCCEEECCCCHHHHHHHHHHHHCCCCCCCEEECC
T ss_conf 8699973258964289887528--9840899745646--5----568967851550023456655432246542488523
Q ss_pred -CCCCCCC
Q ss_conf -6899754
Q gi|254780516|r 73 -GFPCQPF 79 (83)
Q Consensus 73 -G~PCq~f 79 (83)
+|.+++.
T Consensus 96 ~ap~~sg~ 103 (180)
T 1ej0_A 96 MAPNMSGT 103 (180)
T ss_dssp CCCCCCSC
T ss_pred CCCCCCCC
T ss_conf 57776786
No 239
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=32.17 E-value=28 Score=15.70 Aligned_cols=65 Identities=15% Similarity=0.335 Sum_probs=42.0
Q ss_pred CCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEE---CCCCCCCEEEEECC
Q ss_conf 07947889999872220895699998069555112220012332321158975---36578871999868
Q gi|254780516|r 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK---TQDIPDHDVLLAGF 74 (83)
Q Consensus 8 FsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~---~~~~~~~D~l~gG~ 74 (83)
-+|.|-+..-+-+.+...+++++ ..|.|+..++.++. +....++||.++.+ ...+.+.++++.-.
T Consensus 9 I~G~Gr~G~~va~~L~~~g~~vv-vID~d~~~v~~l~~-~g~~vi~GDat~~~~L~~Agi~~A~~vIia~ 76 (413)
T 3l9w_A 9 IAGFGRFGQITGRLLLSSGVKMV-VLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAI 76 (413)
T ss_dssp EECCSHHHHHHHHHHHHTTCCEE-EEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEECC
T ss_pred EECCCHHHHHHHHHHHHCCCCEE-EEECCHHHHHHHHH-CCCCEEEECCCCHHHHHHCCCCCCCEEEEEE
T ss_conf 98988899999999996899889-99899999999997-7990999638999999856977599999971
No 240
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=32.02 E-value=28 Score=15.69 Aligned_cols=65 Identities=11% Similarity=0.100 Sum_probs=39.9
Q ss_pred ECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEE---------CCCCCCCEEEEE
Q ss_conf 107947889999872220895699998069555112220012332321158975---------365788719998
Q gi|254780516|r 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK---------TQDIPDHDVLLA 72 (83)
Q Consensus 7 LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~---------~~~~~~~D~l~g 72 (83)
.--|.+|+..++-+.+.+.|++++ .++.++...+-.........+..|+++.. .++++.+|+|+-
T Consensus 10 VTG~s~GIG~aia~~la~~Ga~V~-~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVn 83 (245)
T 1uls_A 10 ITGAAHGIGRATLELFAKEGARLV-ACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (245)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEE-EEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred EECCCCHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 937787899999999998799999-99798789999998759969999579999999999999997399989998
No 241
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium}
Probab=31.33 E-value=29 Score=15.62 Aligned_cols=68 Identities=16% Similarity=0.113 Sum_probs=40.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-CCCCCEEEEEECC----------CCCCCEEE
Q ss_conf 269641079478899998722208956999980695551122200123-3232115897536----------57887199
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ----------DIPDHDVL 70 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-~~~~~DI~~~~~~----------~~~~~D~l 70 (83)
.+|+||.|+.||+...+.+. . ..+.++|..+.. ..++ ..+.+|+++.... ...++|++
T Consensus 27 ~~vlDLg~aPGgw~q~~~~~----~-~~v~~vd~~~~~------~~~~v~~~~gD~~~~~~~~~~~~~~~~~~~~~~DlV 95 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSL----A-RKIISIDLQEME------EIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDV 95 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTT----C-SEEEEEESSCCC------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEE
T ss_pred CEEEEEEECCCCCEEEEEEC----C-CCEEEEECCCCC------CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEE
T ss_conf 87998410298064876612----6-622655045565------667817852555425688988887765047866889
Q ss_pred E--ECCCCCCCC
Q ss_conf 9--868997543
Q gi|254780516|r 71 L--AGFPCQPFS 80 (83)
Q Consensus 71 ~--gG~PCq~fS 80 (83)
+ ++|.+++..
T Consensus 96 lSD~ap~~sG~~ 107 (191)
T 3dou_A 96 VSDAMAKVSGIP 107 (191)
T ss_dssp EECCCCCCCSCH
T ss_pred ECCCCCCCCCCC
T ss_conf 804644678982
No 242
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=30.74 E-value=21 Score=16.33 Aligned_cols=36 Identities=17% Similarity=0.326 Sum_probs=21.3
Q ss_pred ECCCCCHHHHH-HHHHHHCCCCEEEEEEECCHHHHHHH
Q ss_conf 10794788999-98722208956999980695551122
Q gi|254780516|r 7 LFCGIGGIRLD-LEQTFNHRNVECFFSSEINPYSVKTY 43 (83)
Q Consensus 7 LFsG~GG~~~g-l~~a~~~~~~~~v~a~e~d~~a~~~y 43 (83)
|..|+||+..= ++++ --.|+..+..+|.|.-...-+
T Consensus 415 LvvG~gglG~Ei~KnL-~l~Gv~~i~i~D~d~V~~snL 451 (805)
T 2nvu_B 415 LVIGAGGLGCELLKNL-ALSGFRQIHVIDMDTIDVSNL 451 (805)
T ss_dssp EEECCSSHHHHHHHHH-HTTTCCEEEEEECCBCCGGGG
T ss_pred EECCCCHHHHHHHHHH-HHCCCCEEEEECCCEECHHHC
T ss_conf 9449789999999999-984998599985985067666
No 243
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=30.56 E-value=21 Score=16.29 Aligned_cols=61 Identities=11% Similarity=0.149 Sum_probs=37.1
Q ss_pred CCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC--CCCCEEEEEE---------CCCCCCCEEEE
Q ss_conf 94788999987222089569999806955511222001233--2321158975---------36578871999
Q gi|254780516|r 10 GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIK---------TQDIPDHDVLL 71 (83)
Q Consensus 10 G~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~--~~~~DI~~~~---------~~~~~~~D~l~ 71 (83)
|.+|+..++-+.+-..|++++ .++.++...+.....++.. ....|+++.+ .++++.+|+|+
T Consensus 37 as~GIG~aiA~~la~~Ga~V~-~~~~~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLV 108 (277)
T 3gvc_A 37 AGAGIGLAVARRLADEGCHVL-CADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLV 108 (277)
T ss_dssp TTSTHHHHHHHHHHHTTCEEE-EEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCCHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 787899999999998799999-997988999999998299648999638999999999999999739998999
No 244
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A*
Probab=29.78 E-value=31 Score=15.48 Aligned_cols=68 Identities=24% Similarity=0.342 Sum_probs=36.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC----------CCCCEEEEEECCCCCCCEEEEE
Q ss_conf 696410794788999987222089569999806955511222001233----------2321158975365788719998
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------LIFGDIAKIKTQDIPDHDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~----------~~~~DI~~~~~~~~~~~D~l~g 72 (83)
|++=+=.|.|+.. +.+.+....+.+..+|+|+...+.-+..+|.. .+.+|-.++-.+.-...|+|+.
T Consensus 98 ~VLIiGgG~G~~~---~ellk~~~~~~v~~VEiD~~Vi~~a~~~~~~~~~~~~dpRv~i~~~Da~~~l~~~~~~yDvIi~ 174 (304)
T 2o07_A 98 KVLIIGGGDGGVL---REVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp EEEEEECTTSHHH---HHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred EEEEECCCCHHHH---HHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHCCCCCCEEEE
T ss_conf 6999879945999---9998659853268760469999999985555334435772489960799999747777888999
Q ss_pred C
Q ss_conf 6
Q gi|254780516|r 73 G 73 (83)
Q Consensus 73 G 73 (83)
-
T Consensus 175 D 175 (304)
T 2o07_A 175 D 175 (304)
T ss_dssp E
T ss_pred C
T ss_conf 0
No 245
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, S-adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum tls} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=29.70 E-value=31 Score=15.47 Aligned_cols=73 Identities=18% Similarity=0.234 Sum_probs=42.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEE----CCCCCCCEEEEECCCCCC
Q ss_conf 6964107947889999872220895699998069555112220012332321158975----365788719998689975
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK----TQDIPDHDVLLAGFPCQP 78 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~----~~~~~~~D~l~gG~PCq~ 78 (83)
+++|+=+|.|.+...+.+... +.+.+ ..|+ |...+.-+.+.........|+-+. ...+|+.|+++...-..+
T Consensus 193 ~vlDiG~G~G~~~~~l~~~~p--~~~~~-~~Dl-p~~~~~a~~~~~~~~l~~rv~~~~gD~~~~~~p~~D~v~~~~vLh~ 268 (359)
T 1x19_A 193 KMIDVGGGIGDISAAMLKHFP--ELDST-ILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILYS 268 (359)
T ss_dssp EEEEESCTTCHHHHHHHHHCT--TCEEE-EEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCSEEEEESCGGG
T ss_pred EEEECCCCCCHHHHHHHHHCC--CEEEE-EECC-HHHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCEEEEEEECCC
T ss_conf 799767989799999998399--22899-8166-8889999986675077634527834577635787650455630115
Q ss_pred C
Q ss_conf 4
Q gi|254780516|r 79 F 79 (83)
Q Consensus 79 f 79 (83)
+
T Consensus 269 ~ 269 (359)
T 1x19_A 269 A 269 (359)
T ss_dssp S
T ss_pred C
T ss_conf 9
No 246
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southeast collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=29.63 E-value=30 Score=15.57 Aligned_cols=65 Identities=8% Similarity=0.024 Sum_probs=39.5
Q ss_pred CCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHH----CCCCCC--CCCEEEEEE---------CCCCCCCEEEEE
Q ss_conf 07947889999872220895699998069555112220----012332--321158975---------365788719998
Q gi|254780516|r 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA----NFPNTL--IFGDIAKIK---------TQDIPDHDVLLA 72 (83)
Q Consensus 8 FsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~----n~~~~~--~~~DI~~~~---------~~~~~~~D~l~g 72 (83)
--|.+|+..++-+.+-..|++++..++.++...+.... ..+... ...|+++.+ .+.++.+|+|+-
T Consensus 7 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVn 86 (245)
T 2ph3_A 7 TGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVN 86 (245)
T ss_dssp TTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 08576899999999998799899982899899999999998638982899968889999999999999997299989998
No 247
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold domains, structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus HB8}
Probab=28.58 E-value=33 Score=15.37 Aligned_cols=67 Identities=10% Similarity=0.171 Sum_probs=39.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEE-----CCCCCCCEEEEE
Q ss_conf 26964107947889999872220895699998069555112220012332321158975-----365788719998
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK-----TQDIPDHDVLLA 72 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~-----~~~~~~~D~l~g 72 (83)
||++ .--|-+|+..++-+++ .|++++ .+..++...+.+...........|+++.. .++++.+|+|+-
T Consensus 1 Mkvl-ITGas~GIG~a~a~~l--~G~~V~-l~~r~~~~l~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~g~iDilvn 72 (207)
T 2yut_A 1 MRVL-ITGATGGLGGAFARAL--KGHDLL-LSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVH 72 (207)
T ss_dssp CEEE-EETTTSHHHHHHHHHT--TTSEEE-EECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEE
T ss_pred CEEE-EECCCCHHHHHHHHHH--CCCEEE-EEECCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEEEE
T ss_conf 9899-9878869999999997--799899-9987899999999972997999427999999999998489989997
No 248
>3hvi_A Catechol O-methyltransferase; neurotransmitter degradation, alternative initiation, catecholamine metabolism, cell membrane, cytoplasm; HET: 619; 1.20A {Rattus norvegicus} PDB: 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 2zlb_A 2zth_A* 2zvj_A* 3a7d_A* 3bwm_A* 3bwy_A* 3a7e_A*
Probab=27.86 E-value=34 Score=15.30 Aligned_cols=45 Identities=13% Similarity=0.102 Sum_probs=34.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC
Q ss_conf 69641079478899998722208956999980695551122200123
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~ 49 (83)
+++|+=+|.|..++.+.++... + -.+.++|+++...+.-+.|+..
T Consensus 61 ~iLEiGt~~G~Stl~la~al~~-~-g~v~~id~~~~~~~~ar~~~~~ 105 (221)
T 3hvi_A 61 LVLELGAYCGYSAVRMARLLQP-G-ARLLTMEMNPDYAAITQQMLNF 105 (221)
T ss_dssp EEEEECCTTSHHHHHHHTTCCT-T-CEEEEECCCHHHHHHHHHHHHH
T ss_pred EEEEEECCCHHHHHHHHHHCCC-C-CEEEEEECCCHHHHHHHHHHHH
T ss_conf 9999714742999999985799-9-7899998884125899999997
No 249
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase; 2.09A {Bartonella henselae str} PDB: 3enn_A 3emk_A
Probab=27.58 E-value=26 Score=15.91 Aligned_cols=63 Identities=14% Similarity=0.260 Sum_probs=37.6
Q ss_pred CCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC--CCCCEEEEEE---------CCCCCCCEEEEE
Q ss_conf 794788999987222089569999806955511222001233--2321158975---------365788719998
Q gi|254780516|r 9 CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIK---------TQDIPDHDVLLA 72 (83)
Q Consensus 9 sG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~--~~~~DI~~~~---------~~~~~~~D~l~g 72 (83)
-|.+|+..++-+.+-..|++++. ++.++...+.....++.. .+..|+++.+ .++++.+|+|+-
T Consensus 34 Gas~GIG~aia~~la~~Ga~V~i-~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVn 107 (266)
T 3grp_A 34 GATGGIGEAIARCFHAQGAIVGL-HGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVN 107 (266)
T ss_dssp STTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 87868999999999987999999-979999999999983997799990179999999999999998099839998
No 250
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=27.24 E-value=35 Score=15.24 Aligned_cols=31 Identities=29% Similarity=0.343 Sum_probs=21.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECC
Q ss_conf 6964107947889999872220895699998069
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN 36 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d 36 (83)
+|+||=|+-||++.-+ ....+..-|.++++-
T Consensus 76 ~vvDlG~~~Ggwt~~~---~~~~~v~~V~gvdvG 106 (269)
T 2px2_A 76 KVVDLGCGRGGWSYYA---ATMKNVQEVRGYTKG 106 (269)
T ss_dssp EEEEETCTTSHHHHHH---TTSTTEEEEEEECCC
T ss_pred CEEEECCCCCCHHHHH---HHHCCCCEEEEEEEC
T ss_conf 0898068898289999---873377467999945
No 251
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=27.19 E-value=24 Score=16.00 Aligned_cols=50 Identities=12% Similarity=0.112 Sum_probs=33.3
Q ss_pred CCEEEEEEECCHHHHHHHHHCC--CCCCCCCEEEEEECCCC---CCCEEE-EECCC
Q ss_conf 9569999806955511222001--23323211589753657---887199-98689
Q gi|254780516|r 26 NVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKIKTQDI---PDHDVL-LAGFP 75 (83)
Q Consensus 26 ~~~~v~a~e~d~~a~~~y~~n~--~~~~~~~DI~~~~~~~~---~~~D~l-~gG~P 75 (83)
.++++..+|.++...+.+...+ |....+.|..++-.++. |++|++ ++.||
T Consensus 40 ~~~v~av~d~~~~~a~~~a~~~gi~~~~~y~d~~~~l~~e~~~~~~iD~V~I~tp~ 95 (398)
T 3dty_A 40 FVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSIATPN 95 (398)
T ss_dssp EEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEEESCG
T ss_pred CEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCH
T ss_conf 77999996899999999999868895400499999999875179981799989986
No 252
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, structural genomics; 2.00A {Methanocaldococcus jannaschii DSM2661}
Probab=26.15 E-value=36 Score=15.13 Aligned_cols=72 Identities=15% Similarity=0.094 Sum_probs=42.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC-----CC-CCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 26964107947889999872220895699998069555112220012-----33-2321158975365788719998689
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-----NT-LIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~-----~~-~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
.||++.=||.|-++.-+.++.... -.|.+.|+++...+.-+.|.. +. .+.+|...-... ....|.|+-+..
T Consensus 79 ~~VLeIGtGsGY~ta~la~l~g~~--g~V~~iE~~~~l~~~a~~~l~~~~~~nv~~~~gd~~~g~~~-~~~fD~I~v~~~ 155 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGED--GLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEP-LAPYDRIYTTAA 155 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTT--SEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGG-GCCEEEEEESSB
T ss_pred CEEEEECCCCCHHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC-CCCCCEEEEECC
T ss_conf 889982788419999999984888--71899952889999999999861566449998886557534-688648999456
Q ss_pred C
Q ss_conf 9
Q gi|254780516|r 76 C 76 (83)
Q Consensus 76 C 76 (83)
+
T Consensus 156 ~ 156 (215)
T 2yxe_A 156 G 156 (215)
T ss_dssp B
T ss_pred C
T ss_conf 1
No 253
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=24.49 E-value=39 Score=14.97 Aligned_cols=20 Identities=20% Similarity=0.089 Sum_probs=15.9
Q ss_pred CEEEEECCCCCHHHHHHHHH
Q ss_conf 26964107947889999872
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQT 21 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a 21 (83)
.+++||+++.||+...+.+.
T Consensus 24 ~~vlDLg~aPGgw~q~~~~~ 43 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQK 43 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHH
T ss_conf 87999657897389999998
No 254
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=23.58 E-value=41 Score=14.87 Aligned_cols=71 Identities=20% Similarity=0.240 Sum_probs=43.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCC-------CCC-CCCCEEEEEECC---CCC--CCEE
Q ss_conf 696410794788999987222089569999806955511222001-------233-232115897536---578--8719
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNT-LIFGDIAKIKTQ---DIP--DHDV 69 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~-------~~~-~~~~DI~~~~~~---~~~--~~D~ 69 (83)
+|||+=||.|.+..-|.+.+. ....|..+|.++...+..+.+. ++. ...+|+.++... .++ .+|+
T Consensus 39 ~VLDiGCGtG~~t~~la~~~~--~~~~V~gvD~S~~mi~~a~~~~~~~~~~~~~v~~~~~dae~~~~~~~~~~~~~~fD~ 116 (299)
T 3g5t_A 39 LLVDVGCGPGTATLQMAQELK--PFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDM 116 (299)
T ss_dssp EEEEETCTTTHHHHHHHHHSS--CCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEE
T ss_pred EEEEECCCCCHHHHHHHHHCC--CCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECHHHCCCCCCCCCCCCCCCE
T ss_conf 699982608899999999649--998799985988999999999986366753246898337765442123466556547
Q ss_pred EEECCC
Q ss_conf 998689
Q gi|254780516|r 70 LLAGFP 75 (83)
Q Consensus 70 l~gG~P 75 (83)
++...-
T Consensus 117 V~~~~~ 122 (299)
T 3g5t_A 117 ITAVEC 122 (299)
T ss_dssp EEEESC
T ss_pred EEEECC
T ss_conf 887003
No 255
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase- like protein, methyltransferase domain; 1.85A {Lactobacillus casei atcc 334}
Probab=23.52 E-value=41 Score=14.87 Aligned_cols=72 Identities=14% Similarity=0.149 Sum_probs=38.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHH------HHHHHHCCCCC-------CCCCEEEEEECCCCC--C
Q ss_conf 26964107947889999872220895699998069555------11222001233-------232115897536578--8
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS------VKTYQANFPNT-------LIFGDIAKIKTQDIP--D 66 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a------~~~y~~n~~~~-------~~~~DI~~~~~~~~~--~ 66 (83)
.||+|+=||.|.+...+...... + -.|.++|+++.. .+.-+.|.... .+.+|........++ .
T Consensus 45 ~rVLDiGCG~G~~t~~la~~~g~-~-~~V~gvD~s~~~~~~~~~l~~A~~~~~~~~~~~~i~~~~~d~~~~~~lp~~~~s 122 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQVGS-S-GHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQH 122 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCT-T-CEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCC
T ss_pred CEEEEECCCCCHHHHHHHHHHCC-C-CCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCCCCCCC
T ss_conf 98999665388578999998387-7-752347677777666689999999988557777401020015440247644576
Q ss_pred CEEEEECCC
Q ss_conf 719998689
Q gi|254780516|r 67 HDVLLAGFP 75 (83)
Q Consensus 67 ~D~l~gG~P 75 (83)
+|++++..-
T Consensus 123 FD~V~~~~~ 131 (275)
T 3bkx_A 123 FDRVVLAHS 131 (275)
T ss_dssp CSEEEEESC
T ss_pred CCEEEEEEE
T ss_conf 268978016
No 256
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=22.87 E-value=42 Score=14.80 Aligned_cols=65 Identities=20% Similarity=0.247 Sum_probs=38.6
Q ss_pred ECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC-CCCCEEEEEE---------CCCCCCCEEEEE
Q ss_conf 10794788999987222089569999806955511222001233-2321158975---------365788719998
Q gi|254780516|r 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK---------TQDIPDHDVLLA 72 (83)
Q Consensus 7 LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~-~~~~DI~~~~---------~~~~~~~D~l~g 72 (83)
.--|.+|+..++-+.+-..|++++ .++.++...+......++. ....|+++.. .++++.+|+|+-
T Consensus 7 ITGas~GIG~aia~~la~~Ga~V~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVn 81 (247)
T 3dii_A 7 VTGGGHGIGKQICLDFLEAGDKVC-FIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN 81 (247)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEE-EEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred EECCCCHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 966888899999999998799899-997988999999972698699992069999999999999998099879998
No 257
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum ms-1}
Probab=22.46 E-value=20 Score=16.44 Aligned_cols=62 Identities=15% Similarity=0.154 Sum_probs=32.7
Q ss_pred CCCCHHHHHH-HHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEE-ECCC
Q ss_conf 7947889999-87222089569999806955511222001233232115897536578871999-8689
Q gi|254780516|r 9 CGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLL-AGFP 75 (83)
Q Consensus 9 sG~GG~~~gl-~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~-gG~P 75 (83)
-|.|.+...+ +.+....+++.+..+|.++...+.....++ .+.|+.++-. -+++|+++ +.||
T Consensus 16 iG~G~~g~~h~~~~~~~~~~eiv~v~d~~~~~~~~~~~~~~---~~~~~~ell~--~~~~D~V~I~tp~ 79 (315)
T 3c1a_A 16 IGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPGCV---IESDWRSVVS--APEVEAVIIATPP 79 (315)
T ss_dssp EECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTTCE---EESSTHHHHT--CTTCCEEEEESCG
T ss_pred ECCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCC---CCCCHHHHHC--CCCCCEEEECCCH
T ss_conf 99939999999999718994899998799999997535797---3599999955--9999989992878
No 258
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=22.35 E-value=44 Score=14.74 Aligned_cols=65 Identities=11% Similarity=0.118 Sum_probs=38.6
Q ss_pred ECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC-CCCCEEEEEE-----CCCCCCCEEEEE
Q ss_conf 10794788999987222089569999806955511222001233-2321158975-----365788719998
Q gi|254780516|r 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK-----TQDIPDHDVLLA 72 (83)
Q Consensus 7 LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~-~~~~DI~~~~-----~~~~~~~D~l~g 72 (83)
.--|.+|+..++-+.+.+.|++++ .++.++...+......+.. .+..|+++.. .++++.+|+|+-
T Consensus 12 ITGas~GIG~aia~~la~~Ga~V~-~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVn 82 (244)
T 3d3w_A 12 VTGAGKGIGRGTVQALHATGARVV-AVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVN 82 (244)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEE-EEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEE
T ss_pred EECCCCHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEE
T ss_conf 938975999999999998799999-99799999999998658974999828999999999997199999998
No 259
>3c85_A Putative glutathione-regulated potassium-efflux system protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.19 E-value=44 Score=14.72 Aligned_cols=68 Identities=19% Similarity=0.225 Sum_probs=39.2
Q ss_pred ECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEEC----CCCCCCEEEEECCC
Q ss_conf 1079478899998722208956999980695551122200123323211589753----65788719998689
Q gi|254780516|r 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT----QDIPDHDVLLAGFP 75 (83)
Q Consensus 7 LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~----~~~~~~D~l~gG~P 75 (83)
+-.|+|-+...+-+.+...+...+...|.|+...+.++. .....+++|.++.+. ..+.+.++++.-.|
T Consensus 43 iI~G~GrvG~~ia~~L~~~~~~~~vviD~d~~~v~~l~~-~g~~~v~gD~~d~~~L~~a~~~~~a~~vi~~~~ 114 (183)
T 3c85_A 43 LILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp EEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred EEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHC-CCCEEEECCCCCHHHHHHHCCCCCCCEEEECCC
T ss_conf 998988899999999998489869999388188788630-461389868999999997149676749998168
No 260
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=21.81 E-value=45 Score=14.68 Aligned_cols=63 Identities=13% Similarity=0.203 Sum_probs=32.1
Q ss_pred CCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCC
Q ss_conf 79478899998722208956999980695551122200123323211589753657887199986899
Q gi|254780516|r 9 CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPC 76 (83)
Q Consensus 9 sG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~~~~~~~~D~l~gG~PC 76 (83)
-|.|.....+-+.....+.+ |..++.++...+..+..........++ .+.+++.|+++..-|-
T Consensus 161 ~G~G~~g~~~~~~~~~~g~~-v~v~~r~~~~~~~~~~~g~~~~~~~~l----~~~~~~aDvvi~~~p~ 223 (293)
T 3d4o_A 161 LGLGRVGMSVARKFAALGAK-VKVGARESDLLARIAEMGMEPFHISKA----AQELRDVDVCINTIPA 223 (293)
T ss_dssp ECCSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHTTSEEEEGGGH----HHHTTTCSEEEECCSS
T ss_pred ECCCHHHHHHHHHHHHCCCE-EEEEECCCCHHHHHHHCCCEEEECCHH----HHHHCCCCEEEECCCC
T ss_conf 88888999999999976997-999957730089998518834853306----7775769999989998
No 261
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=21.60 E-value=37 Score=15.07 Aligned_cols=42 Identities=10% Similarity=0.024 Sum_probs=29.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC
Q ss_conf 6964107947889999872220895699998069555112220012
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP 48 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~ 48 (83)
|+||+=||.|-+. +-.+. ..++.|.++|+.+.+++..+++..
T Consensus 74 ~lLDvG~Gpgi~~--~l~a~--~~~~~I~~~D~s~~~~~~~~kw~~ 115 (289)
T 2g72_A 74 TLIDIGSGPTVYQ--LLSAC--SHFEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp EEEEETCTTCCGG--GTTGG--GGCSEEEEECSCHHHHHHHHHHHT
T ss_pred EEEEECCCCCHHH--HHHHC--CCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 8999574713678--88756--467814885498999999998875
No 262
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum 3D7}
Probab=21.33 E-value=46 Score=14.63 Aligned_cols=35 Identities=11% Similarity=0.022 Sum_probs=21.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCH
Q ss_conf 269641079478899998722208956999980695
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP 37 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~ 37 (83)
.+++||+++.||+..-+........ ..+.+.+..+
T Consensus 24 ~~vvDLg~aPGgw~q~~~~~~~~~~-~~~~~~~~~~ 58 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYK-NKIIGIDKKI 58 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSC-EEEEEEESSC
T ss_pred CEEEEECCCCCHHHHHHHHHHCCCC-CCEEECCCCC
T ss_conf 8799947899779999999841788-8378613433
No 263
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=21.23 E-value=45 Score=14.66 Aligned_cols=62 Identities=11% Similarity=0.239 Sum_probs=35.0
Q ss_pred CCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC---CCCCEEEEEE--------CCCCCCCEEEE
Q ss_conf 794788999987222089569999806955511222001233---2321158975--------36578871999
Q gi|254780516|r 9 CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIAKIK--------TQDIPDHDVLL 71 (83)
Q Consensus 9 sG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~---~~~~DI~~~~--------~~~~~~~D~l~ 71 (83)
-|.+|+..++-+.+...|++++. ++.++...+.....++.. .+..|+++.+ .++++.+|+|+
T Consensus 18 Gas~GIG~aia~~la~~Ga~V~~-~~r~~~~l~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~v~~~g~iDilV 90 (254)
T 2wsb_A 18 GAGSGIGLEICRAFAASGARLIL-IDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILV 90 (254)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf 88878999999999987999999-97988999999998478856899974899999999999999669998999
No 264
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein structure initiative; HET: MSE; 1.53A {Streptococcus thermophilus lmg 18311}
Probab=20.98 E-value=47 Score=14.59 Aligned_cols=65 Identities=8% Similarity=0.073 Sum_probs=39.2
Q ss_pred EEEEECCCCCHHH-HHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCC--CEEEEEECCCCCC--CEEEEE
Q ss_conf 6964107947889-99987222089569999806955511222001233232--1158975365788--719998
Q gi|254780516|r 3 KITDLFCGIGGIR-LDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKIKTQDIPD--HDVLLA 72 (83)
Q Consensus 3 ~v~~LFsG~GG~~-~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~--~DI~~~~~~~~~~--~D~l~g 72 (83)
.++|+=|=.|||+ .-|+ .|.+.|+++|.-..-..---++.|.+... -|++++...++++ +|+++.
T Consensus 88 icLDIGaSTGGFTdvLLq-----~GA~~VyaVDVG~~QL~~~Lr~D~RV~~~E~tN~R~l~~~~~~~~~~Dliv~ 157 (291)
T 3hp7_A 88 ITIDIGASTGGFTDVMLQ-----NGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASI 157 (291)
T ss_dssp EEEEETCTTSHHHHHHHH-----TTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEE
T ss_pred EEEECCCCCCCHHHHHHH-----CCCCEEEEEECCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCEEEE
T ss_conf 999778787509999998-----4987699983572210599865998543127638660286617778777885
No 265
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=20.71 E-value=47 Score=14.56 Aligned_cols=64 Identities=17% Similarity=0.170 Sum_probs=36.4
Q ss_pred CCCHHHHHHHH-HHHCCCCEEEEEEECCHHHHHHHHHCC--CC-CCCCCEEEEEECCCCCCCEEE-EECCC
Q ss_conf 94788999987-222089569999806955511222001--23-323211589753657887199-98689
Q gi|254780516|r 10 GIGGIRLDLEQ-TFNHRNVECFFSSEINPYSVKTYQANF--PN-TLIFGDIAKIKTQDIPDHDVL-LAGFP 75 (83)
Q Consensus 10 G~GG~~~gl~~-a~~~~~~~~v~a~e~d~~a~~~y~~n~--~~-~~~~~DI~~~~~~~~~~~D~l-~gG~P 75 (83)
|.|.+..-+-. +....+++.+..+|.++...+.+...| |. ...+.|+.++-.. +++|++ ++.||
T Consensus 13 G~G~~~~~~~~~l~~~~~~elvav~d~~~~~~~~~a~~~~~~~~~~~~~d~~ell~~--~~iD~V~I~tp~ 81 (362)
T 1ydw_A 13 GCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLED--PEIDALYVPLPT 81 (362)
T ss_dssp SCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHC--TTCCEEEECCCG
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEECCCHHHHHCC--CCCCEEEEECCC
T ss_conf 682999999999985899889999879999999999984998555653899999649--998889995882
Done!