BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780516|ref|YP_003064929.1| type II modification methyltransferase [Candidatus Liberibacter asiaticus str. psy62] (83 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780516|ref|YP_003064929.1| type II modification methyltransferase [Candidatus Liberibacter asiaticus str. psy62] gi|254040193|gb|ACT56989.1| type II modification methyltransferase [Candidatus Liberibacter asiaticus str. psy62] Length = 83 Score = 174 bits (440), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 83/83 (100%), Positives = 83/83 (100%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK Sbjct: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 TQDIPDHDVLLAGFPCQPFSQAG Sbjct: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 >gi|319407456|emb|CBI81106.1| Cytosine-specific methyltransferase NlaX [Bartonella sp. 1-1C] Length = 307 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 49/83 (59%), Positives = 61/83 (73%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M +I DLF GIGGIRL E F N +C F+SEI+ YS++TY+ NF N + GDI +I Sbjct: 1 MYRIIDLFAGIGGIRLGFESAFGLNNTQCIFTSEIDKYSIQTYKLNFNNDYVHGDITQIH 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++IP HD+LLAGFPCQPFSQAG Sbjct: 61 EEEIPKHDILLAGFPCQPFSQAG 83 >gi|261400948|ref|ZP_05987073.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970] gi|269209191|gb|EEZ75646.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970] Length = 313 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 53/83 (63%), Positives = 61/83 (73%), Gaps = 2/83 (2%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M KI DLF GIGGIRL EQ F+ +V C FSSEI+ Y+V+TYQAN + GDI + Sbjct: 1 MFKIIDLFAGIGGIRLGFEQAFD--DVRCVFSSEIDKYAVQTYQANHGGETVCGDITQTD 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFSQAG Sbjct: 59 VADIPDHDILLAGFPCQPFSQAG 81 >gi|313667524|ref|YP_004047808.1| cytosine-specific methyltransferase [Neisseria lactamica ST-640] gi|309378245|emb|CBX23130.1| DNA cytosine methyltransferase M.NlaX [Neisseria lactamica Y92-1009] gi|313004986|emb|CBN86414.1| cytosine-specific methyltransferase [Neisseria lactamica 020-06] Length = 313 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 53/83 (63%), Positives = 60/83 (72%), Gaps = 2/83 (2%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M KI DLF GIGGIRL EQ F+ V C FSSEI+ Y+V+TYQAN + GDI + Sbjct: 1 MFKIIDLFAGIGGIRLGFEQAFD--GVRCVFSSEIDKYAVQTYQANHGGETVCGDITQTD 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFSQAG Sbjct: 59 VADIPDHDILLAGFPCQPFSQAG 81 >gi|150026187|ref|YP_001297013.1| type II modification methyltransferase [Flavobacterium psychrophilum JIP02/86] gi|149772728|emb|CAL44211.1| Probable type II modification methyltransferase [Flavobacterium psychrophilum JIP02/86] Length = 335 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 50/82 (60%), Positives = 61/82 (74%), Gaps = 1/82 (1%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI DLF GIGGIRL E + N+EC F+SE N YS +TY AN+PN ++ GDI +I Sbjct: 7 IKIIDLFAGIGGIRLGFELA-SKNNIECVFTSEWNKYSEQTYLANYPNEIVHGDITQISE 65 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP+HD+LLAGFPCQPFSQAG Sbjct: 66 TQIPEHDILLAGFPCQPFSQAG 87 >gi|127471|sp|P24581|MTNX_NEILA RecName: Full=Cytosine-specific methyltransferase NlaX; Short=M.NlaX gi|45004|emb|CAA38357.1| cytosine-specific methyltransferase of NlaIII [Neisseria lactamica] Length = 313 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/83 (62%), Positives = 60/83 (72%), Gaps = 2/83 (2%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M KI DLF GIGGIRL EQ F+ +V C FSSEI+ Y+V+TYQAN + GDI + Sbjct: 1 MFKIIDLFAGIGGIRLGFEQAFD--DVRCVFSSEIDKYAVQTYQANHGGETVCGDITQTD 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+L AGFPCQPFSQAG Sbjct: 59 VADIPDHDILSAGFPCQPFSQAG 81 >gi|317501747|ref|ZP_07959934.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|316896869|gb|EFV18953.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium 8_1_57FAA] Length = 499 Score = 99.8 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 45/84 (53%), Positives = 56/84 (66%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ++ DLF G+GGIRL E+ +E C FSSEI Y++K YQ F N ++GDI +I Sbjct: 67 IRFIDLFAGLGGIRLGFEEGLREVGLEAKCVFSSEIKKYAIKAYQGYFGNEKVYGDITQI 126 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T IPD D LLAGFPCQPFS AG Sbjct: 127 ETDTIPDFDFLLAGFPCQPFSSAG 150 >gi|315498495|ref|YP_004087299.1| transcriptional regulator, xre family [Asticcacaulis excentricus CB 48] gi|315416507|gb|ADU13148.1| transcriptional regulator, XRE family [Asticcacaulis excentricus CB 48] Length = 410 Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 47/79 (59%), Positives = 55/79 (69%), Gaps = 5/79 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKTQDI 64 DLF GIGG+R ++ H C F+SE N Y+ +TY ANF N I GDI +I+T DI Sbjct: 70 DLFAGIGGLRRGFDEIGGH----CVFTSEWNKYAQQTYAANFRDNHPIHGDITQIETADI 125 Query: 65 PDHDVLLAGFPCQPFSQAG 83 PDHDVLLAGFPCQPFS AG Sbjct: 126 PDHDVLLAGFPCQPFSIAG 144 >gi|269123998|ref|YP_003306575.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] gi|268315324|gb|ACZ01698.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] Length = 438 Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 45/84 (53%), Positives = 55/84 (65%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+GGIR+ EQ FN + EC FSSEI +++ +Y F + I GDI +I Sbjct: 17 IKFIDLFAGLGGIRIGFEQAFNTLGISTECVFSSEIKKHAILSYTKYFGDYKIHGDIKEI 76 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 DIPD D LLAGFPCQPFS AG Sbjct: 77 SVDDIPDFDFLLAGFPCQPFSSAG 100 >gi|462657|sp|P34877|MTSA_LACLC RecName: Full=Modification methylase ScrFIA; Short=M.ScrFI-A; Short=M.ScrFIA; AltName: Full=Cytosine-specific methyltransferase ScrFIA gi|149493|gb|AAA25220.1| SCRFI methylase [Lactococcus lactis] gi|2327034|gb|AAB66696.1| 5-methyl-cytosine methyltransferase [Lactococcus lactis subsp. cremoris] Length = 389 Score = 94.7 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 46/81 (56%), Positives = 57/81 (70%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ DLF GIGG RL QT V+ FSSEI+ +++KTY+ANF + GDI KI + Sbjct: 80 KMIDLFAGIGGTRLGFHQT---EKVKSVFSSEIDKFAIKTYKANFGDE-PHGDITKIDEK 135 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+L+ GFPCQ FSQAG Sbjct: 136 DIPDHDILVGGFPCQAFSQAG 156 >gi|321310755|ref|YP_004193084.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str. Langford 1] gi|319802599|emb|CBY93245.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str. Langford 1] Length = 362 Score = 94.4 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ DLF GIGG RL +T V FSSEI+ +S+KTY+ANF T GDI KI ++ Sbjct: 56 KMIDLFAGIGGTRLGFYKT---GKVNVVFSSEIDKFSIKTYKANFGET-PSGDITKIGSE 111 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+L+ GFPCQ FSQAG Sbjct: 112 DIPDHDILVGGFPCQSFSQAG 132 >gi|54297036|ref|YP_123405.1| hypothetical protein lpp1078 [Legionella pneumophila str. Paris] gi|53750821|emb|CAH12229.1| hypothetical protein lpp1078 [Legionella pneumophila str. Paris] Length = 320 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 49/82 (59%), Positives = 55/82 (67%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIR+ F+ N EC FSSEI+PY KTY+ANF FGDI KI Sbjct: 6 FKFIDLFAGIGGIRI----PFDKLNGECVFSSEIDPYCQKTYEANFGEKP-FGDITKISP 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 QD+PDHD+LL GFPCQ FS G Sbjct: 61 QDVPDHDILLGGFPCQAFSIIG 82 >gi|224543136|ref|ZP_03683675.1| hypothetical protein CATMIT_02336 [Catenibacterium mitsuokai DSM 15897] gi|224523923|gb|EEF93028.1| hypothetical protein CATMIT_02336 [Catenibacterium mitsuokai DSM 15897] Length = 430 Score = 93.6 bits (231), Expect = 7e-18, Method: Composition-based stats. Identities = 44/84 (52%), Positives = 52/84 (61%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF GIGGIR E + R V EC F+SEI PY++K + N PN I GDI ++ Sbjct: 5 IKFVDLFAGIGGIRKGFELACSDRGVKTECVFTSEIKPYAIKVLKQNHPNETITGDITQV 64 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 IPD D LL GFPCQ FS AG Sbjct: 65 DATKIPDFDFLLGGFPCQAFSAAG 88 >gi|17863973|gb|AAL46998.1|AF448250_2 putative C-5 cytosine-specific DNA methylase [Bacteroides coprosuis DSM 18011] Length = 401 Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 48/82 (58%), Positives = 56/82 (68%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIRL F EC FSSEI+ ++ KTY +N+ + GDI KIK Sbjct: 74 FKFIDLFAGIGGIRL----PFQLNGGECVFSSEIDYHAQKTYYSNYGD-YPSGDITKIKA 128 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIPDHD+LLAGFPCQ FSQAG Sbjct: 129 EDIPDHDILLAGFPCQAFSQAG 150 >gi|325130383|gb|EGC53149.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304] Length = 425 Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|161870123|ref|YP_001599293.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis 053442] gi|225075874|ref|ZP_03719073.1| hypothetical protein NEIFLAOT_00897 [Neisseria flavescens NRL30031/H210] gi|296313674|ref|ZP_06863615.1| DNA (cytosine-5-)-methyltransferase [Neisseria polysaccharea ATCC 43768] gi|161595676|gb|ABX73336.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis 053442] gi|224952820|gb|EEG34029.1| hypothetical protein NEIFLAOT_00897 [Neisseria flavescens NRL30031/H210] gi|296839734|gb|EFH23672.1| DNA (cytosine-5-)-methyltransferase [Neisseria polysaccharea ATCC 43768] Length = 423 Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|15676920|ref|NP_274067.1| modification methylase NlaIV [Neisseria meningitidis MC58] gi|7226272|gb|AAF41432.1| modification methylase NlaIV [Neisseria meningitidis MC58] gi|325136241|gb|EGC58849.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579] gi|325202033|gb|ADY97487.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149] gi|325208214|gb|ADZ03666.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis NZ-05/33] Length = 423 Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|304387455|ref|ZP_07369646.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|304338548|gb|EFM04667.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] Length = 273 Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|240128365|ref|ZP_04741026.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae SK-93-1035] gi|268686763|ref|ZP_06153625.1| DNA modification methylase [Neisseria gonorrhoeae SK-93-1035] gi|268627047|gb|EEZ59447.1| DNA modification methylase [Neisseria gonorrhoeae SK-93-1035] Length = 423 Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|59801103|ref|YP_207815.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae FA 1090] gi|121634967|ref|YP_975212.1| DNA modification methylase [Neisseria meningitidis FAM18] gi|194098793|ref|YP_002001855.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae NCCP11945] gi|239999085|ref|ZP_04719009.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae 35/02] gi|240014008|ref|ZP_04720921.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae DGI18] gi|240016449|ref|ZP_04722989.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae FA6140] gi|240080568|ref|ZP_04725111.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae FA19] gi|240113063|ref|ZP_04727553.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae MS11] gi|240115818|ref|ZP_04729880.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae PID18] gi|240118116|ref|ZP_04732178.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae PID1] gi|240121574|ref|ZP_04734536.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae PID24-1] gi|240123666|ref|ZP_04736622.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae PID332] gi|240125856|ref|ZP_04738742.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae SK-92-679] gi|254493863|ref|ZP_05107034.1| DNA modification methylase [Neisseria gonorrhoeae 1291] gi|260440365|ref|ZP_05794181.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae DGI2] gi|268594923|ref|ZP_06129090.1| DNA modification methylase [Neisseria gonorrhoeae 35/02] gi|268596698|ref|ZP_06130865.1| DNA modification methylase [Neisseria gonorrhoeae FA19] gi|268599147|ref|ZP_06133314.1| DNA modification methylase [Neisseria gonorrhoeae MS11] gi|268601493|ref|ZP_06135660.1| DNA modification methylase [Neisseria gonorrhoeae PID18] gi|268603831|ref|ZP_06137998.1| DNA modification methylase [Neisseria gonorrhoeae PID1] gi|268682295|ref|ZP_06149157.1| DNA modification methylase [Neisseria gonorrhoeae PID332] gi|268684453|ref|ZP_06151315.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679] gi|291043662|ref|ZP_06569378.1| DNA modification methylase [Neisseria gonorrhoeae DGI2] gi|293398965|ref|ZP_06643130.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|59717998|gb|AAW89403.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae FA 1090] gi|120866673|emb|CAM10425.1| DNA modification methylase [Neisseria meningitidis FAM18] gi|193934083|gb|ACF29907.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae NCCP11945] gi|226512903|gb|EEH62248.1| DNA modification methylase [Neisseria gonorrhoeae 1291] gi|268548312|gb|EEZ43730.1| DNA modification methylase [Neisseria gonorrhoeae 35/02] gi|268550486|gb|EEZ45505.1| DNA modification methylase [Neisseria gonorrhoeae FA19] gi|268583278|gb|EEZ47954.1| DNA modification methylase [Neisseria gonorrhoeae MS11] gi|268585624|gb|EEZ50300.1| DNA modification methylase [Neisseria gonorrhoeae PID18] gi|268587962|gb|EEZ52638.1| DNA modification methylase [Neisseria gonorrhoeae PID1] gi|268622579|gb|EEZ54979.1| DNA modification methylase [Neisseria gonorrhoeae PID332] gi|268624737|gb|EEZ57137.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679] gi|291012125|gb|EFE04114.1| DNA modification methylase [Neisseria gonorrhoeae DGI2] gi|291610379|gb|EFF39489.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|317164377|gb|ADV07918.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae TCDC-NG08107] Length = 423 Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|254673505|emb|CBA08927.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha275] Length = 273 Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|218768275|ref|YP_002342787.1| DNA modification methylase [Neisseria meningitidis Z2491] gi|121052283|emb|CAM08611.1| DNA modification methylase [Neisseria meningitidis Z2491] Length = 423 Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|293363234|ref|ZP_06610118.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma alligatoris A21JP2] gi|292553093|gb|EFF41842.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma alligatoris A21JP2] Length = 428 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+GGIR+ EQ + + EC F+SEI +++K Y+ NF ++ I GDI+KI Sbjct: 13 IKFIDLFAGLGGIRIGFEQALKDKKIKSECVFTSEIKKHAIKAYKNNFKDSNINGDISKI 72 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + IP D LLAGFPCQPFS AG Sbjct: 73 DLEKIPYFDYLLAGFPCQPFSSAG 96 >gi|12229863|sp|Q59605|MTB5_NEIGO RecName: Full=Modification methylase NgoBV; Short=M.NgoBV; AltName: Full=Cytosine-specific methyltransferase NgoBV; Short=M.NgoV gi|1165242|gb|AAA86268.1| M.NgoV DNA methylase [Neisseria gonorrhoeae] Length = 423 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|189423370|ref|YP_001950547.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ] gi|189419629|gb|ACD94027.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ] Length = 415 Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 48/84 (57%), Positives = 51/84 (60%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M DLF GIGGIRL F C F+SE N +S KTY NF N I GDI Sbjct: 67 MFTFIDLFAGIGGIRLG----FQSAGGRCVFTSEWNDWSQKTYVENFGNEHAIVGDIVPY 122 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +DIPDHDVLLAGFPCQPFS AG Sbjct: 123 PAEDIPDHDVLLAGFPCQPFSIAG 146 >gi|172036128|ref|YP_001802629.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] gi|171697582|gb|ACB50563.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] Length = 349 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++K DLF GIGG+RL + F +C FSSE + Y+ KTY+ANF FGDI +I Sbjct: 38 IIKFVDLFAGIGGMRLGFSRPF----TQCVFSSEWDKYAQKTYEANFQEKP-FGDINEIH 92 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 QDIPDHD+L+ GFPCQPFS G Sbjct: 93 LQDIPDHDILIGGFPCQPFSTIG 115 >gi|217980150|ref|YP_002364200.1| DNA-cytosine methyltransferase [Thauera sp. MZ1T] gi|217508321|gb|ACK55106.1| DNA-cytosine methyltransferase [Thauera sp. MZ1T] Length = 419 Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 45/79 (56%), Positives = 52/79 (65%), Gaps = 5/79 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDI 64 DLF G+GGIR+ E C F+SE + Y+ KTY NFP + GDI KI+ DI Sbjct: 70 DLFAGVGGIRMGFEA----HGGRCVFTSEWDSYAQKTYAENFPAEHPLNGDITKIEAADI 125 Query: 65 PDHDVLLAGFPCQPFSQAG 83 PDHDVLLAGFPCQPFS AG Sbjct: 126 PDHDVLLAGFPCQPFSIAG 144 >gi|153955289|ref|YP_001396054.1| DNA methylase [Clostridium kluyveri DSM 555] gi|146348147|gb|EDK34683.1| Predicted DNA methylase [Clostridium kluyveri DSM 555] Length = 416 Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 46/82 (56%), Positives = 53/82 (64%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L DLF GIGGIRL E + +C FSSE + Y+ +TY+AN+ GDI KI Sbjct: 101 LTFIDLFAGIGGIRLGFEDKY----TKCVFSSEWDKYAAQTYEANYGEK-PHGDITKINE 155 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHDVLLAGFPCQPFS G Sbjct: 156 NDIPDHDVLLAGFPCQPFSNIG 177 >gi|219855710|ref|YP_002472832.1| hypothetical protein CKR_2367 [Clostridium kluyveri NBRC 12016] gi|219569434|dbj|BAH07418.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 419 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 46/82 (56%), Positives = 53/82 (64%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L DLF GIGGIRL E + +C FSSE + Y+ +TY+AN+ GDI KI Sbjct: 104 LTFIDLFAGIGGIRLGFEDKY----TKCVFSSEWDKYAAQTYEANYGEK-PHGDITKINE 158 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHDVLLAGFPCQPFS G Sbjct: 159 NDIPDHDVLLAGFPCQPFSNIG 180 >gi|220930232|ref|YP_002507141.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] gi|220000560|gb|ACL77161.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] Length = 416 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 46/82 (56%), Positives = 53/82 (64%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L DLF GIGGIRL E + +C FSSE + Y+ +TY+AN+ GDI KI Sbjct: 101 LTFIDLFAGIGGIRLGFEDKY----TKCVFSSEWDKYAAQTYEANYGEK-PHGDITKINE 155 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHDVLLAGFPCQPFS G Sbjct: 156 NDIPDHDVLLAGFPCQPFSNIG 177 >gi|261400634|ref|ZP_05986759.1| DNA (cytosine-5-)-methyltransferase [Neisseria lactamica ATCC 23970] gi|313668389|ref|YP_004048673.1| DNA modification methylase [Neisseria lactamica ST-640] gi|1709164|sp|P50182|MTN4_NEILA RecName: Full=Modification methylase NlaIV; Short=M.NlaIV; AltName: Full=Cytosine-specific methyltransferase NlaIV gi|476227|gb|AAA53237.1| M.NlaIV [Neisseria lactamica] gi|269209540|gb|EEZ75995.1| DNA (cytosine-5-)-methyltransferase [Neisseria lactamica ATCC 23970] gi|313005851|emb|CBN87307.1| DNA modification methylase [Neisseria lactamica 020-06] Length = 423 Score = 91.3 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 42/84 (50%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V +C F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACKCVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|328948822|ref|YP_004366159.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328449146|gb|AEB14862.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 437 Score = 90.5 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 53/84 (63%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF GIGGIR E + EC F+SEI P++V+ + N PN + GDI KI Sbjct: 7 IKFIDLFAGIGGIRKGFESACADLGIKTECVFTSEIKPHAVEVLKQNHPNETVRGDITKI 66 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T +IPD D LL GFPCQ FS AG Sbjct: 67 ETAEIPDFDFLLGGFPCQAFSAAG 90 >gi|260554958|ref|ZP_05827179.1| DNA-methyltransferase MKpn2kI [Acinetobacter baumannii ATCC 19606] gi|260411500|gb|EEX04797.1| DNA-methyltransferase MKpn2kI [Acinetobacter baumannii ATCC 19606] Length = 413 Score = 90.5 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 45/78 (57%), Positives = 53/78 (67%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGGIRL +Q +C FSSE + ++ KTY ANF L GDI +I+ DIP Sbjct: 63 DLFAGIGGIRLPFQQL----KGKCVFSSEWDKFAQKTYAANF-GELPSGDITQIRAADIP 117 Query: 66 DHDVLLAGFPCQPFSQAG 83 DHD+LL GFPCQ FSQAG Sbjct: 118 DHDILLGGFPCQAFSQAG 135 >gi|323650698|gb|ADX97433.1| M1.BspACI [Bacillus psychrodurans] Length = 320 Score = 89.4 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 11/85 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 K DLF GIGG R+ LE+ +C FSS+I+ Y+ +TY+ NF P+ GDI K Sbjct: 4 FKFIDLFSGIGGFRIALEENGG----QCVFSSDIDKYARETYKENFGEEPS----GDITK 55 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 IK+++IPDHD+L AGFPCQPFS AG Sbjct: 56 IKSEEIPDHDILCAGFPCQPFSIAG 80 >gi|154149305|ref|YP_001405677.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Campylobacter hominis ATCC BAA-381] gi|153805314|gb|ABS52321.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Campylobacter hominis ATCC BAA-381] Length = 88 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 2/84 (2%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 M K DLF GIGGIRL +Q F +++ F SE++ +V+TY+ANF +++ + GDI K+ Sbjct: 1 MYKSIDLFAGIGGIRLGFDQAFGD-DIKTVFISELDEKAVETYKANFNDSIDVVGDITKV 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + IP+HD+LLAGFPCQ FS AG Sbjct: 60 DEKKIPEHDILLAGFPCQAFSLAG 83 >gi|119026301|ref|YP_910146.1| DNA-methyltransferase MKpn2kI [Bifidobacterium adolescentis ATCC 15703] gi|118765885|dbj|BAF40064.1| DNA-methyltransferase MKpn2kI [Bifidobacterium adolescentis ATCC 15703] Length = 383 Score = 89.4 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 45/78 (57%), Positives = 52/78 (66%), Gaps = 4/78 (5%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGG RL ++T V+ FSSEIN +S KTY ANF GDI +I DIP Sbjct: 77 DLFAGIGGTRLGFQET---GRVKVVFSSEINKFSAKTYHANF-GEYPAGDITQIAASDIP 132 Query: 66 DHDVLLAGFPCQPFSQAG 83 DHD+L+ GFPCQ FSQAG Sbjct: 133 DHDILVGGFPCQAFSQAG 150 >gi|127427|sp|P17044|MTBF_BACSU RecName: Full=Modification methylase BsuFI; Short=M.BsuFI; AltName: Full=Cytosine-specific methyltransferase BsuFI gi|39984|emb|CAA35888.1| unnamed protein product [Bacillus subtilis] Length = 409 Score = 89.4 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 45/82 (54%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L DLF GIGGIRL E + +C FSSE + Y+ +TY+AN+ GDI KI Sbjct: 101 LTFIDLFAGIGGIRLGFEDKYT----KCVFSSEWDKYAAQTYEANYGEK-PHGDITKINE 155 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPD DVLLAGFPCQPFS G Sbjct: 156 NDIPDQDVLLAGFPCQPFSNIG 177 >gi|328947602|ref|YP_004364939.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447926|gb|AEB13642.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 431 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/79 (56%), Positives = 54/79 (68%), Gaps = 5/79 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDI 64 DLF GIGGIR EQ +C F+SE + ++ KTY N+P+ I GDI K+ +DI Sbjct: 79 DLFAGIGGIRKGFEQAGG----KCVFTSEWDEFAQKTYSNNYPSKCPINGDITKVNAEDI 134 Query: 65 PDHDVLLAGFPCQPFSQAG 83 PDHDVLLAGFPCQPFS AG Sbjct: 135 PDHDVLLAGFPCQPFSIAG 153 >gi|332188292|ref|ZP_08390019.1| DNA-cytosine methyltransferase family protein [Sphingomonas sp. S17] gi|332011688|gb|EGI53766.1| DNA-cytosine methyltransferase family protein [Sphingomonas sp. S17] Length = 423 Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 46/79 (58%), Positives = 50/79 (63%), Gaps = 5/79 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKTQDI 64 DLF GIGGIRL E C F+SE + Y+ KTY NF I GDI K+ DI Sbjct: 75 DLFAGIGGIRLGFEAAGG----RCVFTSEWDKYAQKTYIENFGEEHEIAGDITKVDADDI 130 Query: 65 PDHDVLLAGFPCQPFSQAG 83 PDHDVLLAGFPCQPFS AG Sbjct: 131 PDHDVLLAGFPCQPFSLAG 149 >gi|283471715|emb|CAQ50926.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Staphylococcus aureus subsp. aureus ST398] Length = 397 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/81 (56%), Positives = 56/81 (69%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ DLF GIGG RL + H NV+C FSSE + +S KTY+ANF T GDI +I Sbjct: 87 KMIDLFAGIGGTRLGFQL---HGNVKCVFSSEWDKFSAKTYKANFGETPK-GDITQIIAD 142 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +IP HD+L+AGFPCQ FSQAG Sbjct: 143 EIPTHDILVAGFPCQAFSQAG 163 >gi|325913633|ref|ZP_08175995.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B] gi|325476992|gb|EGC80142.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B] Length = 372 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/82 (54%), Positives = 55/82 (67%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGGIRL E + +N EC +SSE + Y+ KTYQANF + GDI K+ Sbjct: 56 IKFIDLFAGIGGIRLGFEG--DSKNTECVYSSEWDKYAQKTYQANF-GVMPDGDITKVSA 112 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP+ +VLLAGFPCQPFS G Sbjct: 113 SSIPNFNVLLAGFPCQPFSSIG 134 >gi|254429380|ref|ZP_05043087.1| DNA-cytosine methyltransferase superfamily [Alcanivorax sp. DG881] gi|196195549|gb|EDX90508.1| DNA-cytosine methyltransferase superfamily [Alcanivorax sp. DG881] Length = 435 Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 K DLF GIGG+R+ F +C F+SE + Y+ +TY NF ++ + GDI ++ Sbjct: 86 FKFVDLFAGIGGLRM----AFESAGGQCVFTSEWDSYAQRTYLGNFGDSHQLNGDITEVN 141 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHDVLLAGFPCQPFS AG Sbjct: 142 AADIPDHDVLLAGFPCQPFSIAG 164 >gi|239621327|ref|ZP_04664358.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515788|gb|EEQ55655.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 343 Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 43/83 (51%), Positives = 56/83 (67%), Gaps = 2/83 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++I DLF GIGGIR+ + Q +SSE N YSV+TY+AN+ + + GDI K+ Sbjct: 24 IRIADLFAGIGGIRMGMVQALGDA-AHVVYSSEWNKYSVQTYEANWHDENPVAGDITKVD 82 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D+LLAGFPCQPFS AG Sbjct: 83 EHDVPDIDLLLAGFPCQPFSIAG 105 >gi|189439219|ref|YP_001954300.1| site-specific DNA methylase [Bifidobacterium longum DJO10A] gi|189427654|gb|ACD97802.1| Site-specific DNA methylase [Bifidobacterium longum DJO10A] Length = 323 Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 43/83 (51%), Positives = 56/83 (67%), Gaps = 2/83 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++I DLF GIGGIR+ + Q +SSE N YSV+TY+AN+ + + GDI K+ Sbjct: 4 IRIADLFAGIGGIRMGMVQALGDA-AHVVYSSEWNKYSVQTYEANWHDENPVAGDITKVD 62 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D+LLAGFPCQPFS AG Sbjct: 63 EHDVPDIDLLLAGFPCQPFSIAG 85 >gi|148244085|ref|YP_001220322.1| DNA-cytosine methyltransferase [Acidiphilium cryptum JF-5] gi|146400648|gb|ABQ29180.1| DNA-cytosine methyltransferase [Acidiphilium cryptum JF-5] Length = 487 Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 45/80 (56%), Positives = 53/80 (66%), Gaps = 6/80 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKIKTQD 63 DLF GIGG+R + F C F+SE + YS TY AN+P + I GDI KI +D Sbjct: 136 DLFAGIGGLR----RGFEAIGGRCVFTSEWDKYSQATYAANYPYDDHTISGDITKIGEKD 191 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 IP+HDVLLAGFPCQPFS AG Sbjct: 192 IPEHDVLLAGFPCQPFSIAG 211 >gi|23466029|ref|NP_696632.1| modification methylase very EcoRII (cytosine-specificmethyltransferase [Bifidobacterium longum NCC2705] gi|23326750|gb|AAN25268.1| modification methylase very similar to EcoRII (cytosine-specificmethyltransferase [Bifidobacterium longum NCC2705] Length = 323 Score = 88.2 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 43/83 (51%), Positives = 56/83 (67%), Gaps = 2/83 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++I DLF GIGGIR+ + Q +SSE N YSV+TY+AN+ + + GDI K+ Sbjct: 4 IRIADLFAGIGGIRMGMVQALGDA-AHVVYSSEWNKYSVQTYEANWHDENPVAGDITKVD 62 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D+LLAGFPCQPFS AG Sbjct: 63 EHDVPDIDLLLAGFPCQPFSIAG 85 >gi|294788070|ref|ZP_06753314.1| modification methylase EcoRII [Simonsiella muelleri ATCC 29453] gi|294484363|gb|EFG32046.1| modification methylase EcoRII [Simonsiella muelleri ATCC 29453] Length = 355 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 41/82 (50%), Positives = 58/82 (70%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF G+GGIR +Q F R +E FSSEI+ ++ +TY AN+ + + +GDI +I+ Sbjct: 41 LKAIDLFAGVGGIRTGFQQAFGER-IEFVFSSEIDKFARQTYAANY-HEIPYGDITQIQA 98 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++P HD++LAGFPCQ FS AG Sbjct: 99 HEVPTHDIILAGFPCQAFSVAG 120 >gi|254251049|ref|ZP_04944367.1| Site-specific DNA methylase [Burkholderia dolosa AUO158] gi|124893658|gb|EAY67538.1| Site-specific DNA methylase [Burkholderia dolosa AUO158] Length = 530 Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 43/79 (54%), Positives = 50/79 (63%), Gaps = 5/79 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDI 64 DLF GIGGIR+ F C F+SE + Y+ KTY NFP+ + I GDI + I Sbjct: 176 DLFAGIGGIRM----AFELNGGRCVFTSEWDSYAQKTYHVNFPDGMPIHGDITDVDETSI 231 Query: 65 PDHDVLLAGFPCQPFSQAG 83 P HDVLLAGFPCQPFS AG Sbjct: 232 PSHDVLLAGFPCQPFSIAG 250 >gi|187923141|ref|YP_001894783.1| DNA-cytosine methyltransferase [Burkholderia phytofirmans PsJN] gi|187714335|gb|ACD15559.1| DNA-cytosine methyltransferase [Burkholderia phytofirmans PsJN] Length = 426 Score = 87.8 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAK 58 + DLF GIGGIR+ E +C F+SE N +S KTY+ N+P + GDI Sbjct: 71 FRFIDLFAGIGGIRMGFEA----HGGDCVFTSEWNDFSTKTYRENYPGGGEHALIGDIVS 126 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 +D+P HDVLL GFPCQPFS AG Sbjct: 127 FPAEDVPSHDVLLGGFPCQPFSIAG 151 >gi|167751356|ref|ZP_02423483.1| hypothetical protein EUBSIR_02342 [Eubacterium siraeum DSM 15702] gi|167655602|gb|EDR99731.1| hypothetical protein EUBSIR_02342 [Eubacterium siraeum DSM 15702] Length = 475 Score = 87.4 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 2/84 (2%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 + + DLF GIGGIRL E+ F ++ +E F SE + Y+ KTY+ANF + I GDI KI Sbjct: 140 VFRSIDLFAGIGGIRLGFERAFKNQ-IETVFVSEWDEYAQKTYRANFEDDFEIAGDITKI 198 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 D+P+ D+ LAGFPCQ FS AG Sbjct: 199 DESDVPEFDICLAGFPCQAFSLAG 222 >gi|312898460|ref|ZP_07757850.1| DNA (cytosine-5-)-methyltransferase [Megasphaera micronuciformis F0359] gi|310620379|gb|EFQ03949.1| DNA (cytosine-5-)-methyltransferase [Megasphaera micronuciformis F0359] Length = 400 Score = 87.4 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 45/81 (55%), Positives = 53/81 (65%), Gaps = 11/81 (13%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAKIKTQ 62 DLF GIGG+RL EQ H C +S+E N YS +TY ANF P+ GDI K+ Sbjct: 57 DLFAGIGGMRLAYEQAGGH----CVYSNEWNKYSQQTYFANFGEQPD----GDITKVDEN 108 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L+AGFPCQPFS AG Sbjct: 109 SIPDHDILVAGFPCQPFSIAG 129 >gi|300813374|ref|ZP_07093725.1| Modification methylase HpaII [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512517|gb|EFK39666.1| Modification methylase HpaII [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 347 Score = 87.4 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 47/84 (55%), Positives = 55/84 (65%), Gaps = 2/84 (2%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKI 59 M K DLF GIGGIRL +Q F + ++E F SE + + +TY ANF IFGDI KI Sbjct: 1 MFKSIDLFAGIGGIRLGFDQAFGN-DIETVFVSEWDKKAQETYIANFGEKPKIFGDITKI 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 DIP HD+LLAGFPCQ FS AG Sbjct: 60 DEIDIPIHDILLAGFPCQAFSLAG 83 >gi|319893523|ref|YP_004150398.1| DNA-cytosine methyltransferase [Staphylococcus pseudintermedius HKU10-03] gi|317163219|gb|ADV06762.1| DNA-cytosine methyltransferase [Staphylococcus pseudintermedius HKU10-03] Length = 394 Score = 87.0 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 44/81 (54%), Positives = 56/81 (69%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ DLF GIGG RL + + NV+ FSSE + +S KTY+ANF + GDI +IK Sbjct: 87 KMIDLFAGIGGTRLGFQL---NGNVKSVFSSEWDKFSQKTYKANF-GEIPAGDITEIKEG 142 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIP+HD+L+ GFPCQ FSQAG Sbjct: 143 DIPNHDILVGGFPCQAFSQAG 163 >gi|298373723|ref|ZP_06983712.1| modification methylase EcoRII [Bacteroidetes oral taxon 274 str. F0058] gi|298274775|gb|EFI16327.1| modification methylase EcoRII [Bacteroidetes oral taxon 274 str. F0058] Length = 457 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 LK DLF G+GG L L++ +C F+SEI K Y+ NFP T +I GDI KIK Sbjct: 12 LKFIDLFAGLGGFHLALKEL----GCKCVFASEIKDDLRKLYKINFPETPIIEGDITKIK 67 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +++IP HD+L AGFPCQPFSQAG Sbjct: 68 SEEIPSHDILCAGFPCQPFSQAG 90 >gi|255262721|ref|ZP_05342063.1| cytosine-specific methyltransferase NlaX [Thalassiobium sp. R2A62] gi|255105056|gb|EET47730.1| cytosine-specific methyltransferase NlaX [Thalassiobium sp. R2A62] Length = 421 Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 42/82 (51%), Positives = 54/82 (65%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF GIGGIR+ ++ H C FSSE + +S K+Y AN+ + GDI +I Sbjct: 80 FRFIDLFAGIGGIRMPFQELGGH----CVFSSEWDKFSQKSYAANY-GEVPQGDITQIAA 134 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIP+HD+LLAGFPCQ FSQAG Sbjct: 135 NDIPEHDLLLAGFPCQAFSQAG 156 >gi|294661528|ref|YP_003579981.1| hypothetical protein KP-KP15_gp115 [Klebsiella phage KP15] gi|292660689|gb|ADE34937.1| hypothetical protein [Klebsiella phage KP15] Length = 308 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI DL G+GG+RL ++ F VEC +SEI+ ++ +TY N+ + I GDI I Sbjct: 1 MKIIDLCAGVGGVRLGFDKAFG--GVECLLTSEIDKHAQQTYADNWGDENIQGDIFTIDE 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+PDHD+LLAGFPCQ FS+AG Sbjct: 59 NDVPDHDILLAGFPCQAFSKAG 80 >gi|290969050|ref|ZP_06560585.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1 str. 28L] gi|290781006|gb|EFD93599.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1 str. 28L] Length = 333 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 46/84 (54%), Positives = 54/84 (64%), Gaps = 2/84 (2%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 M + DLF GIGGIRL EQ F + F+SE N S +TY ANF + IFGDI I Sbjct: 1 MYRAIDLFAGIGGIRLGFEQAFGA-EMTTVFTSEWNKKSQETYLANFGEEIHIFGDITAI 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 ++IP HD+LLAGFPCQ FS AG Sbjct: 60 DERNIPPHDILLAGFPCQAFSLAG 83 >gi|238898088|ref|YP_002923769.1| DNA cytosine methylase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465848|gb|ACQ67622.1| DNA cytosine methylase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 401 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 44/84 (52%), Positives = 55/84 (65%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 + DLF GIGGIR+ F+ + EC F+SE N +S KTY N+ P+ + GDI Sbjct: 49 FRFIDLFAGIGGIRMG----FDAQGGECVFTSEWNRFSKKTYIQNYGAPHPFV-GDIVPY 103 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +D+PDHDVLLAGFPCQPFS AG Sbjct: 104 PAEDVPDHDVLLAGFPCQPFSIAG 127 >gi|126658057|ref|ZP_01729209.1| DNA cytosine methylase [Cyanothece sp. CCY0110] gi|126620695|gb|EAZ91412.1| DNA cytosine methylase [Cyanothece sp. CCY0110] Length = 358 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGG+R+ ++++ +C FSSE + Y+ +TYQ NF FGDI KI QDIP Sbjct: 44 DLFAGIGGMRMGFSRSYS----QCVFSSEWDKYAQQTYQFNFGEKP-FGDINKINPQDIP 98 Query: 66 DHDVLLAGFPCQPFSQAG 83 DHD+L+ GFPCQPFS G Sbjct: 99 DHDILIGGFPCQPFSTIG 116 >gi|323486195|ref|ZP_08091524.1| cytosine-specific methyltransferase [Clostridium symbiosum WAL-14163] gi|323400521|gb|EGA92890.1| cytosine-specific methyltransferase [Clostridium symbiosum WAL-14163] Length = 382 Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 43/85 (50%), Positives = 56/85 (65%), Gaps = 11/85 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + DLF GIGG+R+ E+ +C +SSE N YS +TY ANF P GDI + Sbjct: 55 FRFIDLFAGIGGMRIAYERAGG----KCVYSSEWNKYSQQTYFANFGEQPE----GDITQ 106 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ +DIPDHD+L+AGFPCQPFS AG Sbjct: 107 VEAEDIPDHDILVAGFPCQPFSIAG 131 >gi|308229518|gb|ADO24171.1| M.AciI [Arthrobacter citreus] Length = 703 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 2/81 (2%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ LF GIGG L L+ ++ + FSSEI+ ++ ++Y ANFPN + GDI KI Q Sbjct: 23 KVVSLFSGIGGFELGLK--YSSLSSHVIFSSEIDKFAQQSYLANFPNHNLVGDITKIDEQ 80 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +IPDHD+L+ GFPCQ FS AG Sbjct: 81 EIPDHDILMGGFPCQAFSIAG 101 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGG RL LE+ C FSS+I+ Y+ +TY NF + GDI KI +++IP Sbjct: 389 DLFSGIGGFRLALEKN----GGTCLFSSDIDKYARETYFNNF-GEMPSGDITKIASENIP 443 Query: 66 DHDVLLAGFPCQPFSQAG 83 HD+L AGFPCQPFS AG Sbjct: 444 FHDILCAGFPCQPFSIAG 461 >gi|325973250|ref|YP_004250314.1| cytosine-specific DNA modification methylase, HpaII-like protein [Mycoplasma suis str. Illinois] gi|323651852|gb|ADX97934.1| cytosine-specific DNA modification methylase, HpaII-like protein [Mycoplasma suis str. Illinois] Length = 326 Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 42/81 (51%), Positives = 58/81 (71%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ DLF GIGG RL T V+ FSSEI+ ++ KTY++NF + + GDI +I ++ Sbjct: 20 RMIDLFAGIGGTRLGFHLT---GEVKVVFSSEIDKFAKKTYKSNFSDEPL-GDIREINSE 75 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIP+HD+L+AGFPCQ FSQAG Sbjct: 76 DIPNHDILVAGFPCQAFSQAG 96 >gi|296126560|ref|YP_003633812.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563] gi|296018376|gb|ADG71613.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563] Length = 311 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 6/83 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M + DLF G+GG L FN N C F+SEI+ + +TY+ NFP+T++ GDI +I Sbjct: 1 MYRFIDLFAGVGGFHL----AFNSEN--CVFASEIDINARETYKLNFPDTVLEGDITEID 54 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++IP+HD+L AGFPCQPFS AG Sbjct: 55 EKNIPEHDILCAGFPCQPFSVAG 77 >gi|291530358|emb|CBK95943.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3] Length = 696 Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 44/82 (53%), Positives = 55/82 (67%), Gaps = 2/82 (2%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61 K DLF GIGGIRL EQ F + ++ F SE + Y+ +TY+ANF + I GDI +I Sbjct: 5 KSIDLFAGIGGIRLGFEQAFGN-SINTVFVSEWDKYAQETYKANFRDKFDIAGDITQIDE 63 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIPD D+ LAGFPCQ FS AG Sbjct: 64 RDIPDFDICLAGFPCQAFSLAG 85 >gi|163732386|ref|ZP_02139832.1| hypothetical protein RLO149_03007 [Roseobacter litoralis Och 149] gi|161394684|gb|EDQ19007.1| hypothetical protein RLO149_03007 [Roseobacter litoralis Och 149] Length = 410 Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 41/79 (51%), Positives = 54/79 (68%), Gaps = 5/79 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDI 64 DLF GIGG+R +E C F+SE + ++ +TY ANFP N I GDI +I +++ Sbjct: 67 DLFAGIGGLRKAMESAGG----RCVFTSEWDRFAQQTYDANFPDNRPIAGDITEIDAEEL 122 Query: 65 PDHDVLLAGFPCQPFSQAG 83 P+HDVL+AGFPCQPFS AG Sbjct: 123 PEHDVLVAGFPCQPFSIAG 141 >gi|149926993|ref|ZP_01915251.1| C-5 cytosine-specific DNA methylase [Limnobacter sp. MED105] gi|149824214|gb|EDM83434.1| C-5 cytosine-specific DNA methylase [Limnobacter sp. MED105] Length = 435 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/80 (53%), Positives = 56/80 (70%), Gaps = 6/80 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKIKTQD 63 DLF G+GGIR + F ++ +C F+SE + Y+ KTY+ N+ + I GDI K+ T D Sbjct: 89 DLFAGVGGIR----RAFENQGGKCVFTSEWDSYAQKTYRENYQRDHHEISGDITKVNTVD 144 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 IP+HDVLLAGFPCQPFS AG Sbjct: 145 IPNHDVLLAGFPCQPFSIAG 164 >gi|170729237|ref|YP_001763263.1| DNA-cytosine methyltransferase [Shewanella woodyi ATCC 51908] gi|169814584|gb|ACA89168.1| DNA-cytosine methyltransferase [Shewanella woodyi ATCC 51908] Length = 416 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/81 (55%), Positives = 51/81 (62%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGG+RL +Q + C FSSE + ++ TYQ N L FGDI I Sbjct: 97 KFIDLFAGIGGVRLGFQQN----DGACVFSSEFDKHAQATYQTNH-GELPFGDITAINPT 151 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IPDHDVLLAGFPCQPFS AG Sbjct: 152 HIPDHDVLLAGFPCQPFSHAG 172 >gi|194099739|ref|YP_002002874.1| NgoIM [Neisseria gonorrhoeae NCCP11945] gi|240013125|ref|ZP_04720038.1| NgoIM [Neisseria gonorrhoeae DGI18] gi|240015568|ref|ZP_04722108.1| NgoIM [Neisseria gonorrhoeae FA6140] gi|240114103|ref|ZP_04728593.1| NgoIM [Neisseria gonorrhoeae MS11] gi|240114658|ref|ZP_04728720.1| NgoIM [Neisseria gonorrhoeae PID18] gi|240120196|ref|ZP_04733158.1| NgoIM [Neisseria gonorrhoeae PID24-1] gi|240122493|ref|ZP_04735449.1| NgoIM [Neisseria gonorrhoeae PID332] gi|240126658|ref|ZP_04739544.1| NgoIM [Neisseria gonorrhoeae SK-92-679] gi|254492718|ref|ZP_05105889.1| modification methylase NgoBI [Neisseria gonorrhoeae 1291] gi|260441536|ref|ZP_05795352.1| NgoIM [Neisseria gonorrhoeae DGI2] gi|268600171|ref|ZP_06134338.1| modification methylase NgoBI [Neisseria gonorrhoeae MS11] gi|268600304|ref|ZP_06134471.1| modification methylase NgoBI [Neisseria gonorrhoeae PID18] gi|268602536|ref|ZP_06136703.1| modification methylase NgoBI [Neisseria gonorrhoeae PID1] gi|268681085|ref|ZP_06147947.1| modification methylase NgoBI [Neisseria gonorrhoeae PID332] gi|268685237|ref|ZP_06152099.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-92-679] gi|268685565|ref|ZP_06152427.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-93-1035] gi|193935029|gb|ACF30853.1| NgoIM [Neisseria gonorrhoeae NCCP11945] gi|226511758|gb|EEH61103.1| modification methylase NgoBI [Neisseria gonorrhoeae 1291] gi|268584302|gb|EEZ48978.1| modification methylase NgoBI [Neisseria gonorrhoeae MS11] gi|268584435|gb|EEZ49111.1| modification methylase NgoBI [Neisseria gonorrhoeae PID18] gi|268586667|gb|EEZ51343.1| modification methylase NgoBI [Neisseria gonorrhoeae PID1] gi|268621369|gb|EEZ53769.1| modification methylase NgoBI [Neisseria gonorrhoeae PID332] gi|268625521|gb|EEZ57921.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-92-679] gi|268625849|gb|EEZ58249.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-93-1035] gi|317165226|gb|ADV08767.1| NgoIM [Neisseria gonorrhoeae TCDC-NG08107] Length = 315 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLF GIGGIRL E+ + NV FSSE + Y+ + Y+ANF FGDI I Sbjct: 1 MYKTIDLFSGIGGIRLGFEK-YGCTNV---FSSEWDKYARQVYEANFGEK-PFGDINGID 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 56 PSDIPDHDILLAGFPCQPFSIAG 78 >gi|296159065|ref|ZP_06841892.1| DNA-cytosine methyltransferase [Burkholderia sp. Ch1-1] gi|295890626|gb|EFG70417.1| DNA-cytosine methyltransferase [Burkholderia sp. Ch1-1] Length = 426 Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIAK 58 + DLF GIGGIR+ E +C F+SE N +S KTY+ N+P + GDI Sbjct: 71 FRFIDLFAGIGGIRMGFEA----HGGDCVFTSEWNDFSTKTYRENYPGDGEHALIGDIVS 126 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 +++P HDVLL GFPCQPFS AG Sbjct: 127 FPAEEVPGHDVLLGGFPCQPFSIAG 151 >gi|59802299|ref|YP_209011.1| NgoIM [Neisseria gonorrhoeae FA 1090] gi|240081825|ref|ZP_04726368.1| NgoIM [Neisseria gonorrhoeae FA19] gi|59719194|gb|AAW90599.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA 1090] Length = 315 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLF GIGGIRL E+ + NV FSSE + Y+ + Y+ANF FGDI I Sbjct: 1 MYKTIDLFSGIGGIRLGFEK-YGCTNV---FSSEWDKYARQVYEANFGEK-PFGDINGID 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 56 PSDIPDHDILLAGFPCQPFSIAG 78 >gi|268597921|ref|ZP_06132088.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA19] gi|268551709|gb|EEZ46728.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA19] Length = 320 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLF GIGGIRL E+ + NV FSSE + Y+ + Y+ANF FGDI I Sbjct: 6 MYKTIDLFSGIGGIRLGFEK-YGCTNV---FSSEWDKYARQVYEANFGEK-PFGDINGID 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 61 PSDIPDHDILLAGFPCQPFSIAG 83 >gi|268595734|ref|ZP_06129901.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae 35/02] gi|291044897|ref|ZP_06570606.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293397972|ref|ZP_06642178.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|268549123|gb|EEZ44541.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae 35/02] gi|291011791|gb|EFE03787.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291611918|gb|EFF40987.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] Length = 320 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLF GIGGIRL E+ + NV FSSE + Y+ + Y+ANF FGDI I Sbjct: 6 MYKTIDLFSGIGGIRLGFEK-YGCTNV---FSSEWDKYARQVYEANFGEK-PFGDINGID 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 61 PSDIPDHDILLAGFPCQPFSIAG 83 >gi|78777762|ref|YP_394077.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM 1251] gi|78498302|gb|ABB44842.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM 1251] Length = 328 Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 44/82 (53%), Positives = 55/82 (67%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF GIGGIRL EQ F + +E F+SEI+ Y+ +TY ANF T GDI +I Sbjct: 20 FRAIDLFAGIGGIRLGFEQAFGEK-IEFVFASEIDKYARETYYANFGET-PHGDITQIDE 77 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++IP D+LLAGFPCQ FS AG Sbjct: 78 KNIPPFDILLAGFPCQAFSVAG 99 >gi|126464142|ref|YP_001045255.1| DNA-cytosine methyltransferase [Rhodobacter sphaeroides ATCC 17029] gi|126105953|gb|ABN78483.1| DNA-cytosine methyltransferase [Rhodobacter sphaeroides ATCC 17029] Length = 417 Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + DLF GIGG+R + H C F+SE + ++ +TY+AN+ P + GDI K Sbjct: 62 FRFIDLFAGIGGLRRGFDAVGGH----CVFTSEWDRFAQQTYRANYHDGPAHVFKGDITK 117 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ +IP+HDVLLAGFPCQPFS AG Sbjct: 118 VEMHEIPEHDVLLAGFPCQPFSIAG 142 >gi|12229862|sp|Q59603|MTB1_NEIGO RecName: Full=Modification methylase NgoBI; Short=M.NgoBI; AltName: Full=Cytosine-specific methyltransferase NgoBI; Short=M.NgoI gi|5924404|gb|AAB03206.2| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae] Length = 317 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLF GIGGIRL E+ + NV FSSE + Y+ + Y+ANF FGDI I Sbjct: 1 MYKTIDLFSGIGGIRLGFEK-YGCTNV---FSSEWDKYARQVYEANFGEK-PFGDINGID 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 56 PSDIPDHDILLAGFPCQPFSIAG 78 >gi|254804105|ref|YP_003082326.1| putative type II DNA modification methyltransferase [Neisseria meningitidis alpha14] gi|254667647|emb|CBA03458.1| putative type II DNA modification methyltransferase [Neisseria meningitidis alpha14] Length = 315 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLF GIGGIRL E+ + NV FSSE + Y+ + Y+ANF FGDI I Sbjct: 1 MYKTIDLFSGIGGIRLGFEK-YGCTNV---FSSEWDKYARQMYEANFGEK-PFGDINGID 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 56 PSDIPDHDILLAGFPCQPFSIAG 78 >gi|296313699|ref|ZP_06863640.1| modification methylase NgoBI [Neisseria polysaccharea ATCC 43768] gi|296839717|gb|EFH23655.1| modification methylase NgoBI [Neisseria polysaccharea ATCC 43768] Length = 315 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLF GIGGIRL E+ + NV FSSE + Y+ + Y+ANF FGDI I Sbjct: 1 MYKTIDLFSGIGGIRLGFEK-YGCTNV---FSSEWDKYARQMYEANFGEK-PFGDINGID 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 56 PSDIPDHDILLAGFPCQPFSIAG 78 >gi|124024750|ref|YP_001013866.1| site-specific DNA methylase [Prochlorococcus marinus str. NATL1A] gi|123959818|gb|ABM74601.1| Site-specific DNA methylase [Prochlorococcus marinus str. NATL1A] Length = 305 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 44/82 (53%), Positives = 53/82 (64%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF GIGGIR+ E+ EC FSSE + YS TY+ANF + GDI KI Sbjct: 5 FRFIDLFAGIGGIRIPFEEL----GGECVFSSEWDKYSQITYEANF-GEIPKGDITKINA 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIP HD+L+ GFPCQ FSQAG Sbjct: 60 EDIPKHDLLVGGFPCQAFSQAG 81 >gi|299536257|ref|ZP_07049570.1| DNA-methyltransferase MKpn2kI [Lysinibacillus fusiformis ZC1] gi|298728243|gb|EFI68805.1| DNA-methyltransferase MKpn2kI [Lysinibacillus fusiformis ZC1] Length = 403 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 11/83 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAKIK 60 + DLF GIGGIRL F + C F+SE + ++ KTY+ANF PN GDI KI Sbjct: 74 MIDLFAGIGGIRL----AFQSQGGYCCFTSEWDKFAAKTYRANFGDEPN----GDITKIN 125 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++IPDH++LLAGFPCQ FSQAG Sbjct: 126 EKEIPDHNILLAGFPCQAFSQAG 148 >gi|325989685|ref|YP_004249384.1| cytosine-specific methyltransferase [Mycoplasma suis KI3806] gi|323574770|emb|CBZ40430.1| Cytosine-specific methyltransferase [Mycoplasma suis] Length = 326 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 42/81 (51%), Positives = 58/81 (71%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ DLF GIGG RL T V+ FSSEI+ ++ +TY++NF + + GDI +I ++ Sbjct: 20 KMIDLFAGIGGTRLGFHLT---GEVKVVFSSEIDKFAKQTYKSNFSDEPL-GDIREINSE 75 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIP+HD+L+AGFPCQ FSQAG Sbjct: 76 DIPNHDILVAGFPCQAFSQAG 96 >gi|54293106|ref|YP_125521.1| hypothetical protein lpl0145 [Legionella pneumophila str. Lens] gi|53752938|emb|CAH14374.1| hypothetical protein lpl0145 [Legionella pneumophila str. Lens] Length = 417 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 46/80 (57%), Positives = 51/80 (63%), Gaps = 6/80 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--IFGDIAKIKTQD 63 DLF GIGGIRL E EC F+SE + YS TY+ NF N I GDI K+ Sbjct: 71 DLFAGIGGIRLGFESIGG----ECIFTSEWDKYSQITYRKNFRNDHHPIIGDITKVDVNF 126 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 IP+HDVLLAGFPCQPFS AG Sbjct: 127 IPEHDVLLAGFPCQPFSLAG 146 >gi|166368844|ref|YP_001661117.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa NIES-843] gi|166091217|dbj|BAG05925.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa NIES-843] Length = 338 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 46/83 (55%), Positives = 53/83 (63%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+K DLF GIGG R+ F + +C FSSE N +S KTY+ANF N GDI I Sbjct: 1 MVKFIDLFAGIGGFRI----AFENLGCQCVFSSEWNKFSRKTYEANF-NDSPEGDITLIP 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS AG Sbjct: 56 ALTIPDHDILTAGFPCQPFSIAG 78 >gi|323650700|gb|ADX97434.1| M2.BspACI [Bacillus psychrodurans] Length = 444 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LKI LF GIGG LE++ + + + FSSEI+ ++ +Y+ANFPN + GDI KI Sbjct: 86 LKIVSLFSGIGGFEAGLEES--NVSGKIVFSSEIDRFAKISYEANFPNHNLHGDITKIDA 143 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +D+P+HD+L+ GFPCQ FS AG Sbjct: 144 KDVPNHDLLIGGFPCQAFSIAG 165 >gi|313892290|ref|ZP_07825883.1| modification methylase HpaII [Dialister microaerophilus UPII 345-E] gi|313119428|gb|EFR42627.1| modification methylase HpaII [Dialister microaerophilus UPII 345-E] Length = 329 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 2/84 (2%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 M K DLF GIGGIRL EQ F + ++ F SE + + +TY+ANF + + I GDI I Sbjct: 1 MYKSIDLFAGIGGIRLGFEQAFKNE-IKTVFVSEWDKKAQETYRANFKDDIEIRGDINTI 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +DIP H++LLAGFPCQ FS AG Sbjct: 60 DEKDIPKHNILLAGFPCQAFSLAG 83 >gi|308126237|ref|ZP_05908633.2| DNA (cytosine-5-)-methyltransferase [Vibrio parahaemolyticus AQ4037] gi|308107574|gb|EFO45114.1| DNA (cytosine-5-)-methyltransferase [Vibrio parahaemolyticus AQ4037] Length = 426 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 45/78 (57%), Positives = 52/78 (66%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGGIRL F +C F+SEI+ ++ +TY ANF GDI KI DIP Sbjct: 89 DLFAGIGGIRL----PFQEVGGKCVFTSEIDKFAQQTYLANF-GEYPKGDITKISASDIP 143 Query: 66 DHDVLLAGFPCQPFSQAG 83 +HDVLLAGFPCQ FSQAG Sbjct: 144 NHDVLLAGFPCQAFSQAG 161 >gi|149184876|ref|ZP_01863193.1| hypothetical protein ED21_17522 [Erythrobacter sp. SD-21] gi|148830987|gb|EDL49421.1| hypothetical protein ED21_17522 [Erythrobacter sp. SD-21] Length = 410 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 42/79 (53%), Positives = 51/79 (64%), Gaps = 5/79 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDI 64 DLF GIGG+R + F+ C F+SE + Y+ TY N+P N I GDI K+ +I Sbjct: 68 DLFAGIGGLR----RAFDGIGGRCVFTSEWDKYAQLTYHTNYPDNRPIAGDITKVPVDEI 123 Query: 65 PDHDVLLAGFPCQPFSQAG 83 P HDVLLAGFPCQPFS AG Sbjct: 124 PVHDVLLAGFPCQPFSIAG 142 >gi|254671395|emb|CBA08869.1| hypothetical protein NME_1963 [Neisseria meningitidis alpha153] gi|316984659|gb|EFV63623.1| modification methylase NlaIV domain protein [Neisseria meningitidis H44/76] Length = 86 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 2/83 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF + GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSEMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 +T DIPD D+LLAGFPCQ FS A Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFA 86 >gi|320331203|gb|EFW87160.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea str. race 4] gi|330882725|gb|EGH16874.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 420 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 + DLF GIGGIR+ E EC F+SE N +S KTY N+ + F GDI Sbjct: 69 FRFVDLFAGIGGIRMGFEA----HGGECVFTSEWNDFSKKTYIENYGDRHQFVGDIVPFP 124 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +D+P+HDVLL GFPCQPFS AG Sbjct: 125 AEDVPNHDVLLGGFPCQPFSIAG 147 >gi|302347057|ref|YP_003815355.1| putative modification methylase HhaI [Prevotella melaninogenica ATCC 25845] gi|302150379|gb|ADK96640.1| putative modification methylase HhaI [Prevotella melaninogenica ATCC 25845] Length = 453 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG L L + +C FSSE+ K YQ N+P I GDI KI Sbjct: 7 LQFIDLFAGLGGFHLALSKL----GCKCVFSSELKEDLRKLYQINYPGVRIEGDITKIAP 62 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIP HD++ AGFPCQPFSQAG Sbjct: 63 KDIPAHDIICAGFPCQPFSQAG 84 >gi|118576810|ref|YP_876553.1| C-5 cytosine-specific DNA methylase [Cenarchaeum symbiosum A] gi|118195331|gb|ABK78249.1| C-5 cytosine-specific DNA methylase [Cenarchaeum symbiosum A] Length = 325 Score = 84.0 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLFCGIGG+R+ LE+ C +S EIN + KTY+ANF + DI ++ Sbjct: 5 IRFIDLFCGIGGMRIGLERAGG----RCVYSCEINEPARKTYEANF-EPVTDKDITEVDA 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP+HDVL AGFPCQPFS AG Sbjct: 60 GSIPNHDVLAAGFPCQPFSLAG 81 >gi|172038109|ref|YP_001804610.1| putative modification methylase [Cyanothece sp. ATCC 51142] gi|171699563|gb|ACB52544.1| putative modification methylase [Cyanothece sp. ATCC 51142] Length = 344 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 46/89 (51%), Positives = 55/89 (61%), Gaps = 8/89 (8%) Query: 2 LKITDLFCGIGGIRLDLEQT-----FNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFG 54 LK DLFCGIGG R+ LE + +E C FSS+I+P + K Y+ANF G Sbjct: 16 LKYIDLFCGIGGFRIALESVCSQYRLKDKKIESICVFSSDIDPDAKKNYEANFKEKPQ-G 74 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI KI + IP HD+LLAGFPCQPFS G Sbjct: 75 DITKIPIESIPKHDLLLAGFPCQPFSICG 103 >gi|157737722|ref|YP_001490405.1| DNA (cytosine-5-)-methyltransferase [Arcobacter butzleri RM4018] gi|157699576|gb|ABV67736.1| DNA (Cytosine-5-)-methyltransferase [Arcobacter butzleri RM4018] Length = 326 Score = 84.0 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 2/81 (2%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGGIR E+ F + E F+SE++ Y+ Y N+ N +GDI KIK + Sbjct: 21 KFIDLFAGIGGIRTGFEKVFKEES-EFVFASELDKYAQIAYFENY-NEKPYGDITKIKEE 78 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIP+HD++LAGFPCQ FS AG Sbjct: 79 DIPNHDIILAGFPCQAFSIAG 99 >gi|327198092|ref|YP_004306459.1| gp47 [Burkholderia phage KL3] gi|310657226|gb|ADP02340.1| gp47 [Burkholderia phage KL3] Length = 422 Score = 84.0 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 44/83 (53%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 + DLF GIGGIRL E EC F+SE N +S KTY NF + F GDI Sbjct: 70 FRFIDLFAGIGGIRLGFEA----HGGECVFTSEWNDFSKKTYVDNFGDHHPFIGDIVPFA 125 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + +P HDVLLAGFPCQPFS AG Sbjct: 126 AESVPTHDVLLAGFPCQPFSIAG 148 >gi|154484133|ref|ZP_02026581.1| hypothetical protein EUBVEN_01844 [Eubacterium ventriosum ATCC 27560] gi|149735175|gb|EDM51061.1| hypothetical protein EUBVEN_01844 [Eubacterium ventriosum ATCC 27560] Length = 366 Score = 83.6 bits (205), Expect = 7e-15, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 2/82 (2%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61 + DLF GIGGIR + F +N++ F SE + Y+ KTY+AN+ + I GDI KI Sbjct: 15 RAIDLFAGIGGIRKGFDNAFG-KNIDTVFVSEWDEYAQKTYRANYKDKFEIAGDITKIDE 73 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIP+ D+ LAGFPCQ FS AG Sbjct: 74 KDIPEFDICLAGFPCQAFSLAG 95 >gi|127464|sp|P11408|MTM1_MORSP RecName: Full=Modification methylase MspI; Short=M.MspI; AltName: Full=Cytosine-specific methyltransferase MspI gi|44539|emb|CAA32393.1| unnamed protein product [Moraxella sp.] Length = 418 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 43/81 (53%), Positives = 52/81 (64%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGGIR Q+F +C FSSEI+P++ TY NF + FGDI K++ Sbjct: 106 KFIDLFSGIGGIR----QSFEVNGGKCVFSSEIDPFAKFTYYTNF-GVVPFGDITKVEAT 160 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IP HD+L AGFPCQPFS G Sbjct: 161 TIPQHDILCAGFPCQPFSHIG 181 >gi|148826843|ref|YP_001291596.1| modification methylase HaeII [Haemophilus influenzae PittGG] gi|148718085|gb|ABQ99212.1| modification methylase HaeII [Haemophilus influenzae PittGG] Length = 318 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 47/81 (58%), Positives = 52/81 (64%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGGIRL E F +NV FSSE + Y+ Y+ NF FGDI I Sbjct: 5 KTIDLFAGIGGIRLGFE-AFGCKNV---FSSEWDKYAQSMYEVNFGEK-PFGDINDISPS 59 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 60 DIPDHDILLAGFPCQPFSIAG 80 >gi|12229852|sp|O30868|MTH2_HAEAE RecName: Full=Modification methylase HaeII; Short=M.HaeII; AltName: Full=Cytosine-specific methyltransferase HaeII gi|2425087|gb|AAB70829.1| HaeII methylase [Haemophilus aegyptius ATCC 11116] Length = 318 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 47/81 (58%), Positives = 52/81 (64%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGGIRL E F +NV FSSE + Y+ Y+ NF FGDI I Sbjct: 5 KTIDLFAGIGGIRLGFE-AFGCKNV---FSSEWDKYAQSMYEVNFGEK-PFGDINDISPS 59 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 60 DIPDHDILLAGFPCQPFSIAG 80 >gi|68250112|ref|YP_249224.1| modification methylase HaeII [Haemophilus influenzae 86-028NP] gi|68058311|gb|AAX88564.1| modification methylase HaeII [Haemophilus influenzae 86-028NP] Length = 318 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 47/81 (58%), Positives = 52/81 (64%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGGIRL E F +NV FSSE + Y+ Y+ NF FGDI I Sbjct: 5 KTIDLFAGIGGIRLGFE-AFGCKNV---FSSEWDKYAQSMYEVNFGEK-PFGDINDISPS 59 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 60 DIPDHDILLAGFPCQPFSIAG 80 >gi|319776347|ref|YP_004138835.1| Cytosine-specific methyltransferase [Haemophilus influenzae F3047] gi|329123500|ref|ZP_08252064.1| modification methylase HaeII [Haemophilus aegyptius ATCC 11116] gi|317450938|emb|CBY87164.1| Cytosine-specific methyltransferase [Haemophilus influenzae F3047] gi|327471082|gb|EGF16537.1| modification methylase HaeII [Haemophilus aegyptius ATCC 11116] Length = 318 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 47/81 (58%), Positives = 52/81 (64%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGGIRL E F +NV FSSE + Y+ Y+ NF FGDI I Sbjct: 5 KTIDLFAGIGGIRLGFE-AFGCKNV---FSSEWDKYAQSMYEVNFGEK-PFGDINDISPS 59 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 60 DIPDHDILLAGFPCQPFSIAG 80 >gi|145629544|ref|ZP_01785342.1| condesin subunit E [Haemophilus influenzae 22.1-21] gi|144978387|gb|EDJ88151.1| condesin subunit E [Haemophilus influenzae 22.1-21] Length = 95 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/81 (58%), Positives = 52/81 (64%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGGIRL E F +NV FSSE + Y+ Y+ NF FGDI I Sbjct: 5 KTIDLFAGIGGIRLGFE-AFGCKNV---FSSEWDKYAQSMYEVNFGEKP-FGDINDISPS 59 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 60 DIPDHDILLAGFPCQPFSIAG 80 >gi|295675907|ref|YP_003604431.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1002] gi|295435750|gb|ADG14920.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1002] Length = 430 Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 40/89 (44%), Positives = 50/89 (56%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFG 54 + DLF GIGGIR+ E EC F+SE N +S +TY+ N+ + G Sbjct: 71 FRFIDLFAGIGGIRMGFEA----HGGECVFTSEWNDFSTRTYRENYGGNAASGSAHALIG 126 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI +D+P HDVLL GFPCQPFS AG Sbjct: 127 DIVAFPAEDVPSHDVLLGGFPCQPFSIAG 155 >gi|210631776|ref|ZP_03297018.1| hypothetical protein COLSTE_00903 [Collinsella stercoris DSM 13279] gi|210159896|gb|EEA90867.1| hypothetical protein COLSTE_00903 [Collinsella stercoris DSM 13279] Length = 390 Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 42/78 (53%), Positives = 50/78 (64%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGGIR+ F EC FS E + ++ KTY+ N+ T GDI ++ DIP Sbjct: 77 DLFAGIGGIRM----PFQELGGECVFSCEWDKFAQKTYRMNYGETPA-GDIREVAASDIP 131 Query: 66 DHDVLLAGFPCQPFSQAG 83 D DVLLAGFPCQPFS AG Sbjct: 132 DFDVLLAGFPCQPFSLAG 149 >gi|288928693|ref|ZP_06422539.1| modification methylase NgoBI (Cytosine-specific methyltransferase NgoBI) [Prevotella sp. oral taxon 317 str. F0108] gi|288329677|gb|EFC68262.1| modification methylase NgoBI (Cytosine-specific methyltransferase NgoBI) [Prevotella sp. oral taxon 317 str. F0108] Length = 309 Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++ DLF GIGGIR+ F+ +C FSSE + + KTY ANF + + GDI KI Sbjct: 1 MVRYVDLFAGIGGIRI----PFDELGAQCVFSSEWDKAACKTYAANFGD-IPSGDITKIA 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +DIP H +LLAGFPCQ FS G Sbjct: 56 AEDIPPHQLLLAGFPCQAFSIMG 78 >gi|255066464|ref|ZP_05318319.1| modification methylase EcoRII [Neisseria sicca ATCC 29256] gi|298369378|ref|ZP_06980696.1| modification methylase EcoRII [Neisseria sp. oral taxon 014 str. F0314] gi|255049344|gb|EET44808.1| modification methylase EcoRII [Neisseria sicca ATCC 29256] gi|298283381|gb|EFI24868.1| modification methylase EcoRII [Neisseria sp. oral taxon 014 str. F0314] Length = 357 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF GIGGIRL E+ +C FSSEI+ ++ TYQA F + GDI +I Sbjct: 50 FRFIDLFAGIGGIRLPFEEL----GGQCVFSSEIDKFAKTTYQA-FYGDVPHGDITQIAP 104 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +IPD D+LLAGFPCQPFSQAG Sbjct: 105 SEIPDFDLLLAGFPCQPFSQAG 126 >gi|319644454|ref|ZP_07998887.1| hypothetical protein HMPREF9011_04490 [Bacteroides sp. 3_1_40A] gi|317384095|gb|EFV65072.1| hypothetical protein HMPREF9011_04490 [Bacteroides sp. 3_1_40A] Length = 139 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHR--NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF GIGGIR LE + EC F+SEI +++K + N PN LI GDI ++ Sbjct: 5 IKFIDLFAGIGGIRCGLELAAHEAGYKTECVFTSEIKKHAIKVLKQNHPNELINGDITQV 64 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 ++IPD D+ AGFPCQ FS G Sbjct: 65 NEKEIPDFDICCAGFPCQSFSGGG 88 >gi|262402975|ref|ZP_06079535.1| DNA-methyltransferase MKpn2kI [Vibrio sp. RC586] gi|262350474|gb|EEY99607.1| DNA-methyltransferase MKpn2kI [Vibrio sp. RC586] Length = 410 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGGIRL ++ H C F+SE + ++ KTY AN+ + GDI +I +DI Sbjct: 57 DLFAGIGGIRLPFQKLNGH----CVFTSEWDKFAQKTYLANY-GEMPSGDITQISAKDIK 111 Query: 66 DHDVLLAGFPCQPFSQAG 83 DHD+LL GFPCQ FSQAG Sbjct: 112 DHDILLGGFPCQAFSQAG 129 >gi|209520785|ref|ZP_03269531.1| DNA-cytosine methyltransferase [Burkholderia sp. H160] gi|209498782|gb|EDZ98891.1| DNA-cytosine methyltransferase [Burkholderia sp. H160] Length = 432 Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 40/91 (43%), Positives = 50/91 (54%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---------I 52 + DLF GIGGIR+ E EC F+SE N +S +TY+ N+ + Sbjct: 71 FRFIDLFAGIGGIRMGFET----HGGECVFTSEWNEFSTRTYRENYGENAGSGTDSAHAL 126 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GDI +D+P HDVLL GFPCQPFS AG Sbjct: 127 IGDIVAFPAEDVPSHDVLLGGFPCQPFSIAG 157 >gi|186476891|ref|YP_001858361.1| DNA-cytosine methyltransferase [Burkholderia phymatum STM815] gi|184193350|gb|ACC71315.1| DNA-cytosine methyltransferase [Burkholderia phymatum STM815] Length = 428 Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 12/86 (13%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--------PNTLIFGDIA 57 DLF GIGGIR+ E +C F+SE N +S KTY+ NF P + GDI Sbjct: 75 DLFAGIGGIRMGFEA----HGGQCVFTSEWNVFSQKTYRENFGEHCGDAAPQHTLIGDIV 130 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + +P+HD+LL GFPCQPFS AG Sbjct: 131 TFPAEAVPEHDILLGGFPCQPFSIAG 156 >gi|66391578|ref|YP_239103.1| hypothetical protein RB43ORF127c [Enterobacteria phage RB43] gi|62288666|gb|AAX78649.1| hypothetical protein RB43ORF127c [Enterobacteria phage RB43] Length = 302 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 36/82 (43%), Positives = 56/82 (68%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DL G+GG+R+ ++ F+ VEC ++EI+ ++ +TY AN+ + GD+ I Sbjct: 1 MKLIDLCAGVGGVRMGFDRAFD--GVECVLTAEIDKFAQQTYAANWGGDNLEGDLFAIDE 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +PDHD+LLAGFPCQ FS+AG Sbjct: 59 NKVPDHDILLAGFPCQAFSKAG 80 >gi|166367724|ref|YP_001659997.1| modification methylase NgoBI [Microcystis aeruginosa NIES-843] gi|166090097|dbj|BAG04805.1| modification methylase NgoBI [Microcystis aeruginosa NIES-843] Length = 330 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 3/84 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ++ DLFCG+GG R+ +EQ +N+E C FS +I+ + Y ANF + GDI +I Sbjct: 10 IRFVDLFCGLGGFRVAIEQVCRQKNLESDCVFSCDIDKDARSIYHANFGDQPQ-GDITEI 68 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 DIP+HD+L+AGFPCQPFS G Sbjct: 69 AALDIPNHDILMAGFPCQPFSICG 92 >gi|119355933|ref|YP_910577.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM 266] gi|119353282|gb|ABL64153.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM 266] Length = 425 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/79 (54%), Positives = 52/79 (65%), Gaps = 5/79 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDI 64 DLF GIGG+R + F C F+SE + YS +TY ANF + I GDI KI +DI Sbjct: 71 DLFAGIGGMR----KAFEELGGRCVFTSEWDKYSRQTYCANFDCDHEIGGDITKIDARDI 126 Query: 65 PDHDVLLAGFPCQPFSQAG 83 P HD+L+AGFPCQPFS AG Sbjct: 127 PSHDILVAGFPCQPFSIAG 145 >gi|254445875|ref|ZP_05059351.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae bacterium DG1235] gi|198260183|gb|EDY84491.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae bacterium DG1235] Length = 321 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF GIGG R+ LE+ EC FSSEI+ ++ TY+ NF + GDI KI Sbjct: 7 FRFIDLFAGIGGFRIGLERLGG----ECVFSSEIDRHAAATYERNFGHKPA-GDITKIDA 61 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++PDH+V+ GFPCQPFS +G Sbjct: 62 SEVPDHEVICGGFPCQPFSVSG 83 >gi|255591450|ref|XP_002535514.1| cytosine-specific methyltransferase, putative [Ricinus communis] gi|223522828|gb|EEF26867.1| cytosine-specific methyltransferase, putative [Ricinus communis] Length = 206 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 8/85 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIAK 58 +I DLF GIGGIR+ E +C F+SE N +S KTYQ NF + + GDI Sbjct: 29 RIIDLFAGIGGIRMGFEA----HGGQCVFTSEWNDFSQKTYQENFRDGTAQHALIGDIVT 84 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + +P+HD+LL GFPCQPFS AG Sbjct: 85 FPAEAVPEHDILLGGFPCQPFSIAG 109 >gi|1171044|sp|P43420|MTB6_BACSF RecName: Full=Modification methylase Bsp6I; Short=M.Bsp6I; AltName: Full=Cytosine-specific methyltransferase Bsp6I gi|547481|emb|CAA57293.1| site-specific DNA-methyltransferase (cytosine-specific) [Bacillus sp.] gi|1098125|prf||2115268B methyltransferase Bsp6IM Length = 315 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 3/83 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML+I LF G+GGI L EQT E +++E + + TYQ+NF N LI DI IK Sbjct: 1 MLQIASLFAGVGGIDLGFEQT---GYFETVWANEYDKNAAITYQSNFKNKLIIDDIRNIK 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +D+PD DVLL+GFPC FS AG Sbjct: 58 VEDVPDFDVLLSGFPCTSFSVAG 80 >gi|227485931|ref|ZP_03916247.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC 51172] gi|227235976|gb|EEI85991.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC 51172] Length = 318 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLFCGIGG R+ F + +C FSS+I+ Y+ +TY NF GDI K+ Sbjct: 1 MYKFIDLFCGIGGFRI----AFENLGCKCVFSSDIDVYARETYNDNF-GEYPAGDIIKVD 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + IP+HD+L AGFPCQPFS AG Sbjct: 56 AETIPNHDILCAGFPCQPFSIAG 78 >gi|46191283|ref|ZP_00120453.2| COG0270: Site-specific DNA methylase [Bifidobacterium longum DJO10A] Length = 315 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 2/78 (2%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIP 65 +F GIGGIR+ + Q +SSE N YSV+TY+AN+ + + GDI K+ D+P Sbjct: 1 MFAGIGGIRMGMVQALGDA-AHVVYSSEWNKYSVQTYEANWHDENPVAGDITKVDEHDVP 59 Query: 66 DHDVLLAGFPCQPFSQAG 83 D D+LLAGFPCQPFS AG Sbjct: 60 DIDLLLAGFPCQPFSIAG 77 >gi|315931535|gb|EFV10502.1| DNA (cytosine-5) methyltransferase [Campylobacter jejuni subsp. jejuni 327] Length = 284 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF GIGGIR+ + F + +E FSSEI+ ++ +TY NF N L GDI +I Sbjct: 8 LKAIDLFAGIGGIRIGFKNIFQEK-LEFVFSSEIDKFACQTYFCNF-NELPHGDITQINE 65 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +IP H++LLAGFPCQ FS AG Sbjct: 66 NNIPKHNILLAGFPCQAFSIAG 87 >gi|212716092|ref|ZP_03324220.1| hypothetical protein BIFCAT_01005 [Bifidobacterium catenulatum DSM 16992] gi|212661459|gb|EEB22034.1| hypothetical protein BIFCAT_01005 [Bifidobacterium catenulatum DSM 16992] Length = 453 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 42/83 (50%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + DLF GIGGIR H FSSE N +S +TY+ N+ T + GDI K+ Sbjct: 84 FRTIDLFAGIGGIRRGFASAGGH----AVFSSEWNEFSARTYRTNYGFTEQMAGDITKVD 139 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD DV+LAGFPCQPFS AG Sbjct: 140 VDDIPDCDVVLAGFPCQPFSVAG 162 >gi|157414453|ref|YP_001481709.1| hypothetical protein C8J_0133 [Campylobacter jejuni subsp. jejuni 81116] gi|283955585|ref|ZP_06373079.1| hypothetical protein C1336_000030018 [Campylobacter jejuni subsp. jejuni 1336] gi|157385417|gb|ABV51732.1| hypothetical protein C8J_0133 [Campylobacter jejuni subsp. jejuni 81116] gi|283792928|gb|EFC31703.1| hypothetical protein C1336_000030018 [Campylobacter jejuni subsp. jejuni 1336] Length = 321 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF GIGGIR+ + F + +E FSSEI+ ++ +TY NF N L GDI +I Sbjct: 8 LKAIDLFAGIGGIRIGFKNIFQEK-LEFVFSSEIDKFACQTYFCNF-NELPHGDITQINE 65 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +IP H++LLAGFPCQ FS AG Sbjct: 66 NNIPKHNILLAGFPCQAFSIAG 87 >gi|86136173|ref|ZP_01054752.1| hypothetical protein MED193_18659 [Roseobacter sp. MED193] gi|85827047|gb|EAQ47243.1| hypothetical protein MED193_18659 [Roseobacter sp. MED193] Length = 399 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 42/79 (53%), Positives = 51/79 (64%), Gaps = 5/79 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDI 64 DLF GIGG+R+ E C F+SE N +S +TY ANF + + GDI +I +I Sbjct: 54 DLFAGIGGLRVGFEAAGG----TCVFTSEWNRFSQETYSANFGDEHPLSGDITEISEAEI 109 Query: 65 PDHDVLLAGFPCQPFSQAG 83 P HDVLLAGFPCQPFS AG Sbjct: 110 PAHDVLLAGFPCQPFSIAG 128 >gi|225571452|ref|ZP_03780448.1| hypothetical protein CLOHYLEM_07550 [Clostridium hylemonae DSM 15053] gi|225159928|gb|EEG72547.1| hypothetical protein CLOHYLEM_07550 [Clostridium hylemonae DSM 15053] Length = 377 Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 3/84 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ++ DLFCGIGG R + F+ ++E C FSS+I+ Y+ +Y+ANF + GDI KI Sbjct: 74 IRYIDLFCGIGGFRYASQYAFDKLDLEGKCVFSSDIDKYAQVSYEANFGERPM-GDITKI 132 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +IPD D+L GFPCQ FS G Sbjct: 133 EASEIPDFDILFGGFPCQAFSICG 156 >gi|238922589|ref|YP_002936102.1| modification methylase [Eubacterium rectale ATCC 33656] gi|238874261|gb|ACR73968.1| modification methylase [Eubacterium rectale ATCC 33656] Length = 392 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/78 (53%), Positives = 50/78 (64%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGG+RL E C +S+E N YS +TY ANF GDI K+ + IP Sbjct: 69 DLFAGIGGMRLAYENVGGR----CVYSNEWNKYSQQTYYANFGEQPE-GDITKVDAKTIP 123 Query: 66 DHDVLLAGFPCQPFSQAG 83 DHD+L+AGFPCQPFS AG Sbjct: 124 DHDILVAGFPCQPFSIAG 141 >gi|1709152|sp|P50185|MTD5_DACSA RecName: Full=Modification methylase DsaV; Short=M.DsaV; AltName: Full=Cytosine-specific methyltransferase DsaV gi|505694|gb|AAA86046.1| DsaV methyltransferase [Dactylococcopsis salina] Length = 351 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/82 (51%), Positives = 53/82 (64%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF GIGG+R+ E+ +C FSSEI+ + +TY+ANF + GDI K+ Sbjct: 6 LKFIDLFAGIGGMRIPFEEL----GGKCVFSSEIDKHCQRTYEANF-GEMPTGDITKLSA 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP HD+LLAGFPCQ FSQ G Sbjct: 61 DSIPYHDLLLAGFPCQAFSQGG 82 >gi|1657420|gb|AAC45971.1| DNA cytosine methyltransferase M.SenPI [Salmonella enterica subsp. enterica serovar Enteritidis] Length = 379 Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 53/84 (63%), Gaps = 10/84 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---FPNTLIFGDIAKI 59 ++ DLF GIGG RL QT V FSSE + ++ KTY AN FP+ GDI KI Sbjct: 73 RMIDLFAGIGGTRLGFHQT---NAVNVVFSSEWDKFAQKTYHANYGDFPD----GDITKI 125 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +DIPDH++L+ GFPC FSQAG Sbjct: 126 DEKDIPDHEILVGGFPCVAFSQAG 149 >gi|1871451|dbj|BAA11167.1| C5-cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi] gi|3421011|emb|CAA76526.1| M.Ecl18kI (DNA-methyltransferase) [Enterobacter cloacae] Length = 379 Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 53/84 (63%), Gaps = 10/84 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---FPNTLIFGDIAKI 59 ++ DLF GIGG RL QT V FSSE + ++ KTY AN FP+ GDI KI Sbjct: 73 RMIDLFAGIGGTRLGFHQT---NAVNVVFSSEWDKFAQKTYHANYGDFPD----GDITKI 125 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +DIPDH++L+ GFPC FSQAG Sbjct: 126 DEKDIPDHEILVGGFPCVAFSQAG 149 >gi|32470131|ref|NP_863573.1| DNA-methyltransferase MKpn2kI [Klebsiella pneumoniae] gi|462656|sp|P34879|MTS2_SHISO RecName: Full=Modification methylase SsoII; Short=M.SsoII; AltName: Full=Cytosine-specific methyltransferase SsoII gi|11559818|gb|AAG38101.1|AF300473_2 DNA-methyltransferase MKpn2kI [Klebsiella pneumoniae] gi|294244|gb|AAA98279.1| C5-cytosine methylase [Plasmid P4] Length = 379 Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 53/84 (63%), Gaps = 10/84 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---FPNTLIFGDIAKI 59 ++ DLF GIGG RL QT V FSSE + ++ KTY AN FP+ GDI KI Sbjct: 73 RMIDLFAGIGGTRLGFHQT---NAVNVVFSSEWDKFAQKTYHANYGDFPD----GDITKI 125 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +DIPDH++L+ GFPC FSQAG Sbjct: 126 DEKDIPDHEILVGGFPCVAFSQAG 149 >gi|317497297|ref|ZP_07955620.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium 5_1_63FAA] gi|316895366|gb|EFV17525.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium 5_1_63FAA] Length = 385 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 43/82 (52%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIR Q F + +SSE + ++ KTY+ NF + GDI + Sbjct: 72 FKQIDLFAGIGGIR----QAFQRQGGYNVYSSEWDKFAQKTYRINF-GEIPDGDITLVSE 126 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFSQAG Sbjct: 127 NDIPDHDILLAGFPCQPFSQAG 148 >gi|50914506|ref|YP_060478.1| Type II restriction-modification system methylation subunit [Streptococcus pyogenes MGAS10394] gi|40218542|gb|AAR83196.1| type II modification methylase [Streptococcus pyogenes] gi|50261587|gb|AAT72355.1| methylase [Streptococcus pyogenes] gi|50903580|gb|AAT87295.1| Type II restriction-modification system methylation subunit [Streptococcus pyogenes MGAS10394] gi|114386439|gb|ABI74454.1| DNA methyltransferase [Streptococcus pyogenes] Length = 408 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 43/82 (52%), Positives = 53/82 (64%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K+ DLF GIGG RL + T VE F+SE + ++ KTY NF +T GDI +I Sbjct: 101 FKMIDLFAGIGGTRLGFQLT---NEVETVFTSEWDKFAQKTYITNFGDTPE-GDITQIDE 156 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L+AGFPCQ FSQAG Sbjct: 157 NTIPDHDILVAGFPCQAFSQAG 178 >gi|323525262|ref|YP_004227415.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1001] gi|323382264|gb|ADX54355.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1001] Length = 428 Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 42/86 (48%), Positives = 48/86 (55%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIA 57 + DLF GIGGIR + F C F+SE N +S KTYQ N + GDI Sbjct: 73 FRFIDLFAGIGGIR----RGFEAHGGRCVFTSEWNEFSKKTYQQNHRDADGTHQFVGDIV 128 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 D+P HDVLLAGFPCQPFS AG Sbjct: 129 SFAENDVPAHDVLLAGFPCQPFSIAG 154 >gi|91782477|ref|YP_557683.1| C-5 cytosine-specific DNA methylase [Burkholderia xenovorans LB400] gi|91686431|gb|ABE29631.1| C-5 cytosine-specific DNA methylase [Burkholderia xenovorans LB400] Length = 418 Score = 81.3 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 41/86 (47%), Positives = 49/86 (56%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIA 57 ++ DLF GIGGIR + F C F+SE N +S KTYQ N+ + GDI Sbjct: 69 FRLVDLFAGIGGIR----RGFEAHGGRCVFTSEWNDFSKKTYQENYRDCDDAHQFVGDIV 124 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 +P HDVLLAGFPCQPFS AG Sbjct: 125 SFDVASVPSHDVLLAGFPCQPFSIAG 150 >gi|323968854|gb|EGB64190.1| DNA-cytosine methyltransferase [Escherichia coli TA007] Length = 272 Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 53/84 (63%), Gaps = 10/84 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---FPNTLIFGDIAKI 59 ++ DLF GIGG RL QT V FSSE + ++ KTY AN FP+ GDI KI Sbjct: 73 RMIDLFAGIGGTRLGFHQT---NAVNVVFSSEWDKFAQKTYHANYGDFPD----GDITKI 125 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +DIPDH++L+ GFPC FSQAG Sbjct: 126 DEKDIPDHEILVGGFPCVAFSQAG 149 >gi|257060181|ref|YP_003138069.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|256590347|gb|ACV01234.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 336 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 8/90 (8%) Query: 1 MLKITDLFCGIGGIR--LDLEQTFNHRNVE-----CFFSSEINPYSVKTYQANFPNTLIF 53 +LK +DLFCGIGG R LD+ + + R + C FSS+I+P + K Y+ NF F Sbjct: 15 ILKYSDLFCGIGGFRVALDIVCSTSKRWDKKIKPICVFSSDIDPDAQKNYELNFGEK-PF 73 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GDI KI+ Q IP+H++L AGFPCQPFS G Sbjct: 74 GDITKIEAQSIPNHNLLFAGFPCQPFSICG 103 >gi|219724141|ref|YP_002477179.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Borrelia burgdorferi 156a] gi|225575842|ref|YP_002724642.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 118a] gi|219693145|gb|ACL34349.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Borrelia burgdorferi 156a] gi|225546742|gb|ACN92742.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 118a] Length = 311 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLFCGIGG R+ L++ + +EC FS +I+ Y+ YQ NF + +GD+ +I Sbjct: 1 MFKFIDLFCGIGGFRVALQK----QGMECVFSCDIDKYAQTAYQKNFGDKP-YGDVTEIP 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IP H++L AGFPCQPFS +G Sbjct: 56 EDKIPRHEILCAGFPCQPFSISG 78 >gi|224796590|ref|YP_002641667.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 64b] gi|223929176|gb|ACN23896.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 64b] gi|312149869|gb|ADQ29935.1| DNA-cytosine methyltransferase [Borrelia burgdorferi N40] Length = 324 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLFCGIGG R+ L++ + +EC FS +I+ Y+ YQ NF + +GD+ +I Sbjct: 14 MFKFIDLFCGIGGFRVALQK----QGMECVFSCDIDKYAQTAYQKNFGDKP-YGDVTEIP 68 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IP H++L AGFPCQPFS +G Sbjct: 69 EDKIPRHEILCAGFPCQPFSISG 91 >gi|315637499|ref|ZP_07892709.1| modification methylase EcoRII [Arcobacter butzleri JV22] gi|315478217|gb|EFU68940.1| modification methylase EcoRII [Arcobacter butzleri JV22] Length = 326 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 2/81 (2%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGGIR E+ F + E F+SE++ Y+ Y N+ N +GDI KI + Sbjct: 21 KFIDLFAGIGGIRTGFEKVFKEES-EFVFASELDRYAQIAYFENY-NEKPYGDITKINEE 78 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIP+HD++LAGFPCQ FS AG Sbjct: 79 DIPNHDIVLAGFPCQAFSIAG 99 >gi|170691874|ref|ZP_02883038.1| DNA-cytosine methyltransferase [Burkholderia graminis C4D1M] gi|170143158|gb|EDT11322.1| DNA-cytosine methyltransferase [Burkholderia graminis C4D1M] Length = 438 Score = 80.5 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 42/86 (48%), Positives = 49/86 (56%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIA 57 + DLF GIGGIR + F +C F+SE N +S KTYQ N + GDI Sbjct: 83 FRFIDLFAGIGGIR----RGFEAHGGQCVFTSEWNEFSKKTYQQNHRDADDAHQFVGDIV 138 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 +IP HDVLLAGFPCQPFS AG Sbjct: 139 SFAEDEIPPHDVLLAGFPCQPFSIAG 164 >gi|326571776|gb|EGE21785.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC7] Length = 458 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGGIRL E+ C FSSE + ++ +TYQ N + + FGDI +I Sbjct: 121 KFIDLFAGIGGIRLGAERN----GGLCVFSSEFDKFAQQTYQLNH-HEMPFGDITQIDAN 175 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 ++P HD+LLAGFPCQPFS +G Sbjct: 176 NLPSHDLLLAGFPCQPFSYSG 196 >gi|307729019|ref|YP_003906243.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1003] gi|307583554|gb|ADN56952.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1003] Length = 428 Score = 80.1 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 42/86 (48%), Positives = 48/86 (55%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIA 57 + DLF GIGGIR + F C F+SE N +S KTYQ N + GDI Sbjct: 73 FRFIDLFAGIGGIR----RGFEAHGGRCVFTSEWNEFSKKTYQQNHRDPDDAHQFVGDIV 128 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 Q +P HDVLLAGFPCQPFS AG Sbjct: 129 SFPEQSVPSHDVLLAGFPCQPFSIAG 154 >gi|169334482|ref|ZP_02861675.1| hypothetical protein ANASTE_00885 [Anaerofustis stercorihominis DSM 17244] gi|169259199|gb|EDS73165.1| hypothetical protein ANASTE_00885 [Anaerofustis stercorihominis DSM 17244] Length = 337 Score = 80.1 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 2/83 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 ++ DLF GIGGIRL E F N+E F SE + Y+ KTY NF + I GDI +I Sbjct: 6 IRSIDLFAGIGGIRLGFENVFKD-NIETVFVSEWDKYAKKTYMENFNDDFEIAGDITEID 64 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IP+ D+ LAGFPCQ FS AG Sbjct: 65 ETSIPNFDICLAGFPCQAFSLAG 87 >gi|166367718|ref|YP_001659991.1| modification methylase [Microcystis aeruginosa NIES-843] gi|166090091|dbj|BAG04799.1| modification methylase [Microcystis aeruginosa NIES-843] Length = 159 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 55/84 (65%), Gaps = 3/84 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ++ DLFCG+GG R+ +E+ +N+E C FS +I+ + Y ANF + GDI +I Sbjct: 10 IRFIDLFCGLGGFRVAIERVCRQKNLESDCVFSCDIDKDARAIYHANFGDQPQ-GDITEI 68 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 DIP+HD+L+AGFPCQPFS G Sbjct: 69 AALDIPNHDILMAGFPCQPFSICG 92 >gi|226942156|ref|YP_002797230.1| Cytosine-specific methyltransferase [Laribacter hongkongensis HLHK9] gi|226717083|gb|ACO76221.1| Cytosine-specific methyltransferase [Laribacter hongkongensis HLHK9] Length = 420 Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 42/80 (52%), Positives = 48/80 (60%), Gaps = 6/80 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--IFGDIAKIKTQD 63 DLF GIGGIR Q F C F+SE + Y+ KTY N + GDI ++ D Sbjct: 75 DLFAGIGGIR----QAFEDVGGRCVFTSEWDSYAQKTYAENHRRDAHALNGDITQVGAAD 130 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 IP HDVLLAGFPCQPFS AG Sbjct: 131 IPAHDVLLAGFPCQPFSIAG 150 >gi|261337441|ref|ZP_05965325.1| modification methylase HpaII [Bifidobacterium gallicum DSM 20093] gi|270277829|gb|EFA23683.1| modification methylase HpaII [Bifidobacterium gallicum DSM 20093] Length = 442 Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 42/84 (50%), Positives = 50/84 (59%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--FPNTLIFGDIAKI 59 + DLF GIGGIR H FSSE N +S +TY+ N F T+ GDI ++ Sbjct: 73 FRTIDLFAGIGGIRRGFATAGGH----AVFSSEWNEFSTRTYRTNYGFAETMA-GDITQV 127 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 DIPD DV+LAGFPCQPFS AG Sbjct: 128 DANDIPDCDVVLAGFPCQPFSLAG 151 >gi|304373674|ref|YP_003858419.1| putative DNA-methyltransferase, type II restriction-modification system [Enterobacteria phage RB16] gi|299829630|gb|ADJ55423.1| putative DNA-methyltransferase, type II restriction-modification system [Enterobacteria phage RB16] Length = 302 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI DL G+GG+R + F VEC +SEI+ ++ +TY N+ + + GD+ I Sbjct: 1 MKIIDLCAGVGGVRFGFDNAFG--GVECLLTSEIDKHAQQTYIENWGDDNLQGDLFAIDE 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +PDHD+LLAGFPCQ FS+AG Sbjct: 59 NKVPDHDILLAGFPCQAFSKAG 80 >gi|56461628|ref|YP_156909.1| DNA cytosine methylase [Idiomarina loihiensis L2TR] gi|56180638|gb|AAV83360.1| DNA cytosine methylase [Idiomarina loihiensis L2TR] Length = 419 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF G+GGIRL E+ C FSSEI+ ++ TY N T+ +GDI KI Sbjct: 99 IKFIDLFAGVGGIRLAFEKA----GAACVFSSEIDTHAQLTYFTNH-GTVPYGDITKIDA 153 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP HD+L AGFPCQPFS G Sbjct: 154 DSIPSHDILCAGFPCQPFSHIG 175 >gi|1171048|sp|P25263|MTC1_HERAU RecName: Full=Modification methylase HgiCI; Short=M.HgiCI; AltName: Full=Cytosine-specific methyltransferase HgiCI gi|515372|emb|CAA38933.1| methyltransferase [Herpetosiphon aurantiacus] Length = 420 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/85 (52%), Positives = 52/85 (61%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 MLK DLF GIGG+RL EQ + +E C SSEI+ ++ TY NF GDI + Sbjct: 1 MLKFIDLFAGIGGMRLGFEQAMHELGIETACVLSSEIDKHAQTTYAMNFHEQSQ-GDITQ 59 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I QD P D LLAGFPCQPFS AG Sbjct: 60 I--QDFPSFDFLLAGFPCQPFSYAG 82 >gi|16923911|gb|AAL31632.1|AF438204_2 C5 DNA methyltransferase [Positive selection vector pMTet1] Length = 418 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGGIR Q+F +C FSSEI+P++ TY NF + FGDI K++ Sbjct: 106 KFIDLFSGIGGIR----QSFEVNGGKCVFSSEIDPFAKFTYYTNF-GVVPFGDITKVEAT 160 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IP+HD+L AGFP QP+S G Sbjct: 161 TIPEHDILCAGFPGQPWSHMG 181 >gi|238783073|ref|ZP_04627100.1| Modification methylase EcoRII [Yersinia bercovieri ATCC 43970] gi|238716074|gb|EEQ08059.1| Modification methylase EcoRII [Yersinia bercovieri ATCC 43970] Length = 475 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 47/102 (46%), Positives = 57/102 (55%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIF-GDIA 57 + DLF GIGGIR + F +C F+SE NPY+V+TY+AN+ P+ F DI Sbjct: 96 FRFIDLFAGIGGIR----KGFEAIGGQCVFTSEWNPYAVRTYKANWYCDPDEHRFNSDIR 151 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 +I Q IPDHDVLLAGFPCQPFS AG Sbjct: 152 EITLSETAEISDEEAYKYIDQHIPDHDVLLAGFPCQPFSLAG 193 >gi|254409526|ref|ZP_05023307.1| DNA-cytosine methyltransferase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196183523|gb|EDX78506.1| DNA-cytosine methyltransferase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 437 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/84 (53%), Positives = 52/84 (61%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ++ DLF GIGGIRL EQ N N EC +SEI+P Y+ NF N + GDI KI Sbjct: 4 IRFIDLFAGIGGIRLAFEQAANTLNYKTECVLASEISPDCQWVYKNNF-NHEVLGDIRKI 62 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +P HDVLLAGFPCQ FS AG Sbjct: 63 --NQLPPHDVLLAGFPCQSFSYAG 84 >gi|317182001|dbj|BAJ59785.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter pylori F57] Length = 434 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 3/85 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 +++ DLF G+GG+RL EQ + + +C SSEI +++ Y +F T GDI + Sbjct: 28 IVRFVDLFAGLGGLRLGFEQASSSIGLKSQCILSSEIKKSALQAYTDHFKETPQ-GDITQ 86 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I T DIP+ DVLLAGFPCQPFS AG Sbjct: 87 INTNDIPNFDVLLAGFPCQPFSNAG 111 >gi|159027151|emb|CAO86782.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 347 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M DLF GIGG R+ LE +C FSSEI+P+S K Y AN+ + DI K++ Sbjct: 1 MWTFIDLFAGIGGFRIALENL----GCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKLE 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + +PDHD+L GFPCQ FS AG Sbjct: 57 AKTVPDHDILCGGFPCQAFSIAG 79 >gi|315608882|ref|ZP_07883855.1| modification methylase EcoRII [Prevotella buccae ATCC 33574] gi|315249409|gb|EFU29425.1| modification methylase EcoRII [Prevotella buccae ATCC 33574] Length = 312 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/78 (55%), Positives = 49/78 (62%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGGIRL E H C FSSE + + KTY+ANF GDI KI+ +DIP Sbjct: 10 DLFAGIGGIRLGFESAGGH----CVFSSEFDENACKTYEANF-GEHPSGDITKIEAKDIP 64 Query: 66 DHDVLLAGFPCQPFSQAG 83 D D+LL GFPCQ FS G Sbjct: 65 DFDILLGGFPCQAFSIIG 82 >gi|166368121|ref|YP_001660394.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa NIES-843] gi|166090494|dbj|BAG05202.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa NIES-843] Length = 347 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M DLF G+GG R+ LE +C FSSEI+P+S K Y AN+ + DI K++ Sbjct: 1 MWTFIDLFAGVGGFRIALENL----GCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKLE 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + +PDHD+L GFPCQ FS AG Sbjct: 57 AKTVPDHDILCGGFPCQAFSIAG 79 >gi|119511452|ref|ZP_01630563.1| modification methylase NlaIV [Nodularia spumigena CCY9414] gi|119463917|gb|EAW44843.1| modification methylase NlaIV [Nodularia spumigena CCY9414] Length = 433 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/84 (51%), Positives = 53/84 (63%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ++ DLF GIGGIRL EQ N N+E C SSEIN + Y+ NF N GD+ I Sbjct: 4 IRFVDLFSGIGGIRLAFEQAANSLNIESECVLSSEINTDAQFVYETNF-NHKSLGDVRLI 62 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +P+H+VLLAGFPCQ FS AG Sbjct: 63 --EKLPEHEVLLAGFPCQSFSHAG 84 >gi|227485932|ref|ZP_03916248.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC 51172] gi|227235977|gb|EEI85992.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC 51172] Length = 358 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF G+GG L + + F+SEI+ ++ K+Y +NF ++GDI KI Sbjct: 5 IKIASLFSGVGGFEEGLR--LAKIDFDLVFASEIDRFAQKSYSSNFDTDNLYGDITKINE 62 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++IPDHD+LLAGFPCQ FS AG Sbjct: 63 KNIPDHDLLLAGFPCQSFSIAG 84 >gi|332673536|gb|AEE70353.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 83] Length = 434 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 3/85 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 +++ DLF G+GG+RL EQ + + +C SSEI +++ Y +F T GDI + Sbjct: 28 IVRFVDLFAGLGGLRLGFEQASSSIGLKSQCILSSEIKKSALQAYIDHFKETPQ-GDITQ 86 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I T DIP+ DVLLAGFPCQPFS AG Sbjct: 87 INTNDIPNFDVLLAGFPCQPFSNAG 111 >gi|152998369|ref|YP_001343204.1| DNA-cytosine methyltransferase [Marinomonas sp. MWYL1] gi|150839293|gb|ABR73269.1| DNA-cytosine methyltransferase [Marinomonas sp. MWYL1] Length = 417 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 11/85 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---FPNTLIFGDIAK 58 + DLF GIGG+RL +Q C FSSE + ++ TY+ N FP FGDI Sbjct: 96 FRFIDLFAGIGGVRLGFQQAGG----TCVFSSEFDKHAQLTYKKNHGEFP----FGDITL 147 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I + IP HDVLLAGFPCQPFS AG Sbjct: 148 ISPESIPAHDVLLAGFPCQPFSHAG 172 >gi|319778406|ref|YP_004129319.1| DNA (cytosine-5-)-methyltransferase [Taylorella equigenitalis MCE9] gi|317108430|gb|ADU91176.1| DNA (cytosine-5-)-methyltransferase [Taylorella equigenitalis MCE9] Length = 160 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 41/78 (52%), Positives = 51/78 (65%), Gaps = 2/78 (2%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDIP 65 +F GIG IRL EQ F ++ ++ + SEI+ +VKTY +NF N LI GD+ K DIP Sbjct: 1 MFAGIGCIRLGFEQAFGNK-LKTVYVSEIDSNAVKTYTSNFSSNKLIHGDVTKEVESDIP 59 Query: 66 DHDVLLAGFPCQPFSQAG 83 HD LLAGFPC FS AG Sbjct: 60 PHDFLLAGFPCHAFSAAG 77 >gi|159026805|emb|CAO86650.1| ngoBIM [Microcystis aeruginosa PCC 7806] Length = 331 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 3/84 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ++ DLF G+GG RL +EQ +N+E C FS +I+ + Y ANF + GDI +I Sbjct: 10 IRFIDLFSGLGGFRLAIEQVCRPKNLESDCVFSCDIDKDAQAIYHANFGDQ-PRGDITEI 68 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 DIP+HD+L+AGFPCQPFS G Sbjct: 69 AALDIPNHDILMAGFPCQPFSICG 92 >gi|119488852|ref|ZP_01621814.1| NgoIM [Lyngbya sp. PCC 8106] gi|119455013|gb|EAW36155.1| NgoIM [Lyngbya sp. PCC 8106] Length = 385 Score = 77.4 bits (189), Expect = 5e-13, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60 +K +LF GIGG RL ++ N+E ++++ + S + Y++NF N+++ DI +I Sbjct: 1 MKAIELFAGIGGFRLGMKGA----NIETVWANDSSELSCRVYESNFGQNSIVLADITQID 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIP HD L AGFPCQPFS AG Sbjct: 57 LSDIPHHDFLTAGFPCQPFSPAG 79 >gi|167746073|ref|ZP_02418200.1| hypothetical protein ANACAC_00768 [Anaerostipes caccae DSM 14662] gi|167654588|gb|EDR98717.1| hypothetical protein ANACAC_00768 [Anaerostipes caccae DSM 14662] Length = 312 Score = 77.4 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 33/82 (40%), Positives = 54/82 (65%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ LFCG GG L++ F+ ++++ + Y+V+TY+ANF + +I GDI +I+ Sbjct: 1 MRVLSLFCGCGG----LDKGFDETGYNIVWANDFDKYAVETYKANFGDNVILGDINEIEL 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +P+ DVL+ GFPCQPFS G Sbjct: 57 NSLPEFDVLIGGFPCQPFSMMG 78 >gi|259500984|ref|ZP_05743886.1| modification methylase EcoRII [Lactobacillus iners DSM 13335] gi|302190566|ref|ZP_07266820.1| DNA-cytosine methyltransferase [Lactobacillus iners AB-1] gi|259167678|gb|EEW52173.1| modification methylase EcoRII [Lactobacillus iners DSM 13335] Length = 336 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGG RL LE +C +S+E + ++ +TYQ NF +T GDI ++ Sbjct: 13 KFIDLFAGIGGFRLALESF----GAKCVYSNEWDKFAQETYQMNFGDTPE-GDITQVDET 67 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 68 SIPDHDILCAGFPCQPFSISG 88 >gi|309807025|ref|ZP_07701007.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 03V1-b] gi|308166645|gb|EFO68842.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 03V1-b] Length = 336 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGG RL LE +C +S+E + ++ +TYQ NF +T GDI ++ Sbjct: 13 KFIDLFAGIGGFRLALESF----GAKCVYSNEWDKFAQETYQMNFGDTP-GGDITQVDET 67 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 68 SIPDHDILCAGFPCQPFSISG 88 >gi|254443346|ref|ZP_05056822.1| C-5 cytosine-specific DNA methylase superfamily [Verrucomicrobiae bacterium DG1235] gi|198257654|gb|EDY81962.1| C-5 cytosine-specific DNA methylase superfamily [Verrucomicrobiae bacterium DG1235] Length = 349 Score = 77.4 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 5/79 (6%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 +D+F G GG R LE+ C FS E++ ++ +TYQANF T +GDI + + + Sbjct: 37 SDIFAGAGGGRFALERL----EGRCVFSCELDKFAQRTYQANFGET-PYGDIFDVSPKSV 91 Query: 65 PDHDVLLAGFPCQPFSQAG 83 P H++L AGFPCQPFS AG Sbjct: 92 PPHNILFAGFPCQPFSHAG 110 >gi|325912401|ref|ZP_08174796.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 143-D] gi|325475743|gb|EGC78914.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 143-D] Length = 336 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGG RL LE +C +S+E + ++ +TYQ NF +T GDI ++ Sbjct: 13 KFIDLFAGIGGFRLALESF----GAKCVYSNEWDRFAQETYQMNFGDTPE-GDITQVDET 67 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 68 SIPDHDILCAGFPCQPFSISG 88 >gi|238787820|ref|ZP_04631617.1| Modification methylase EcoRII [Yersinia frederiksenii ATCC 33641] gi|238724163|gb|EEQ15806.1| Modification methylase EcoRII [Yersinia frederiksenii ATCC 33641] Length = 475 Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 46/102 (45%), Positives = 56/102 (54%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIF-GDIA 57 + DLF GIGGIR + F +C F+SE NPY+V+TY+AN+ P F DI Sbjct: 96 FRFIDLFAGIGGIR----KGFEAIGGQCVFTSEWNPYAVRTYKANWYCDPVEHRFNSDIR 151 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 +I + IPDHDVLLAGFPCQPFS AG Sbjct: 152 EITLSENTEISDEEAYRNIDEHIPDHDVLLAGFPCQPFSLAG 193 >gi|296114735|ref|ZP_06833385.1| DNA-cytosine methyltransferase [Gluconacetobacter hansenii ATCC 23769] gi|295978659|gb|EFG85387.1| DNA-cytosine methyltransferase [Gluconacetobacter hansenii ATCC 23769] Length = 419 Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 + DLF GIGG+R+ E+ C F+SE + +S +TY N+P N I GDI Sbjct: 70 FRFIDLFAGIGGLRIGFEEIGG----RCVFTSEWDRFSRQTYALNYPDNHEISGDIRPFA 125 Query: 61 TQD--IPDHDVLLAGFPCQPFSQAG 83 IP+HDVLLAGFPCQPFS AG Sbjct: 126 EDPSLIPEHDVLLAGFPCQPFSIAG 150 >gi|157827820|ref|YP_001496884.1| site-specific DNA methylase [Rickettsia bellii OSU 85-389] gi|157803124|gb|ABV79847.1| Site-specific DNA methylase [Rickettsia bellii OSU 85-389] Length = 165 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLFCGIGG R LE +N+EC FSS+I+ + Y+ NF + GDI +I Sbjct: 1 MYKFIDLFCGIGGFRKALES----KNLECVFSSDIDKDVQEAYKRNFGDKP-HGDITEIP 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IP HD+L AGFPCQ FS +G Sbjct: 56 ANKIPKHDILCAGFPCQSFSISG 78 >gi|307152213|ref|YP_003887597.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306982441|gb|ADN14322.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 317 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 3/85 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 +++ DLFCGIGG R+ Q N+ +C FSS+I+P + + Y F GDI K Sbjct: 12 VIRYIDLFCGIGGFRIAASQVCLEYNIKPQCVFSSDIDPDAQQVYSKYFGEKPA-GDITK 70 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I IPDH +LLAGFPCQPFS G Sbjct: 71 IPADSIPDHHLLLAGFPCQPFSICG 95 >gi|67458530|ref|YP_246154.1| site-specific DNA methylase [Rickettsia felis URRWXCal2] gi|67004063|gb|AAY60989.1| Site-specific DNA methylase [Rickettsia felis URRWXCal2] Length = 105 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLFCGIGG R LE + +EC FSS+I+ + Y+ NF + +GDI +I Sbjct: 1 MYKFIDLFCGIGGFRKALEA----KGLECVFSSDIDKDVQEAYKRNFGDKP-YGDITEIS 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IP HD+L AGFPCQ FS +G Sbjct: 56 ENKIPKHDILCAGFPCQSFSISG 78 >gi|91206207|ref|YP_538562.1| site-specific DNA methylase [Rickettsia bellii RML369-C] gi|91069751|gb|ABE05473.1| Site-specific DNA methylase [Rickettsia bellii RML369-C] Length = 308 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLFCGIGG R LE +N+EC FSS+I+ + Y+ NF + GDI ++ Sbjct: 1 MYKFIDLFCGIGGFRKALES----KNLECVFSSDIDKDVQEAYKRNFGDKP-HGDITEMP 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IP HD+L AGFPCQ FS +G Sbjct: 56 ANKIPKHDILCAGFPCQSFSISG 78 >gi|323495143|ref|ZP_08100228.1| DNA-methyltransferase MKpn2kI [Vibrio brasiliensis LMG 20546] gi|323310583|gb|EGA63762.1| DNA-methyltransferase MKpn2kI [Vibrio brasiliensis LMG 20546] Length = 443 Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 12/82 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAKIKTQ 62 DLF GIGGIR Q F C F+SE + ++ KTY N+ PN GDI KI + Sbjct: 88 DLFAGIGGIR----QPFQELGGHCVFTSEWDKFAQKTYLHNYGEMPN----GDITKICVK 139 Query: 63 D-IPDHDVLLAGFPCQPFSQAG 83 + IP+HD+LL GFPCQ FSQAG Sbjct: 140 EQIPEHDILLGGFPCQAFSQAG 161 >gi|309803758|ref|ZP_07697844.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 11V1-d] gi|308164167|gb|EFO66428.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 11V1-d] Length = 336 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 13 KFIDLFAGIGGFRLALESF----GAQCVYSNEWDKFAQETYHMNFGDTPE-GDITQVDET 67 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 68 SIPDHDILCAGFPCQPFSISG 88 >gi|218439646|ref|YP_002377975.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] gi|218172374|gb|ACK71107.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] Length = 320 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 5/86 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQT---FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA 57 ++K DLFCGIGG RL + Q +N +++ C FSS+I+ + Y+ NF + L GDI Sbjct: 12 VIKYVDLFCGIGGFRLAVNQVSEGYNFKSI-CVFSSDIDGDAQTVYRENFGD-LPEGDIT 69 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 KI + IP H +LLAGFPCQPFS G Sbjct: 70 KIPAEMIPHHHLLLAGFPCQPFSICG 95 >gi|329920363|ref|ZP_08277095.1| modification methylase HhaI [Lactobacillus iners SPIN 1401G] gi|328936039|gb|EGG32492.1| modification methylase HhaI [Lactobacillus iners SPIN 1401G] Length = 336 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 13 KFIDLFAGIGGFRLALESF----GAKCVYSNEWDKFAQETYHMNFGDTPE-GDITQVDET 67 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 68 SIPDHDILCAGFPCQPFSISG 88 >gi|312872570|ref|ZP_07732638.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2062A-h1] gi|311091932|gb|EFQ50308.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2062A-h1] Length = 336 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 13 KFIDLFAGIGGFRLALESF----GAKCVYSNEWDKFAQETYHMNFGDTPE-GDITQVDET 67 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 68 SIPDHDILCAGFPCQPFSISG 88 >gi|256760956|ref|ZP_05501536.1| type II restriction-modification system methylation subunit [Enterococcus faecalis T3] gi|256682207|gb|EEU21902.1| type II restriction-modification system methylation subunit [Enterococcus faecalis T3] Length = 405 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 4/80 (5%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLF GIGG RL + T V+ FSSE + ++ KTY ANF GDI +I + Sbjct: 97 MIDLFAGIGGTRLGFQLT---GKVKSVFSSEWDKFAQKTYFANF-GEYPHGDITQIDEKV 152 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P+HD+L+AGFPCQ FSQAG Sbjct: 153 VPNHDILVAGFPCQAFSQAG 172 >gi|309808410|ref|ZP_07702309.1| putative modification methylase HhaI [Lactobacillus iners LactinV 01V1-a] gi|308168238|gb|EFO70357.1| putative modification methylase HhaI [Lactobacillus iners LactinV 01V1-a] Length = 198 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 13 KFIDLFAGIGGFRLALESF----GAKCVYSNEWDKFAQETYHMNFGDTPE-GDITQVDET 67 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 68 RIPDHDILCAGFPCQPFSISG 88 >gi|320326214|gb|EFW82269.1| cytosine-specific DNA-methyltransferase [Pseudomonas syringae pv. glycinea str. B076] Length = 448 Score = 75.5 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF G+GG L L++ EC F++E + + Y NF GDI + Sbjct: 4 FRFVDLFAGLGGFHLALDRLGG----ECVFAAEWKEHLREIYNVNF-GLYPAGDITSVSL 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIPDHDVL AGFPCQPFS+AG Sbjct: 59 KDIPDHDVLTAGFPCQPFSKAG 80 >gi|121997219|ref|YP_001002006.1| DNA-cytosine methyltransferase [Halorhodospira halophila SL1] gi|121588624|gb|ABM61204.1| DNA-cytosine methyltransferase [Halorhodospira halophila SL1] Length = 436 Score = 75.5 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 43/93 (46%), Positives = 52/93 (55%), Gaps = 19/93 (20%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIKT-- 61 DLF G+GGIR E H C FSSE + ++++TY+ANF N I DI +I Sbjct: 74 DLFAGVGGIRQGFESVGGH----CVFSSEWDRFALQTYRANFGNEGEEIQTDIRQITAVS 129 Query: 62 -----------QDIPDHDVLLAGFPCQPFSQAG 83 + IP HDVLLAGFPCQPFS AG Sbjct: 130 DDADENSRSIDERIPQHDVLLAGFPCQPFSLAG 162 >gi|312874943|ref|ZP_07734962.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2053A-b] gi|311089688|gb|EFQ48113.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2053A-b] Length = 336 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 13 KFIDLFAGIGGFRLALESF----GAKCVYSNEWDKFAQETYHMNFGDTPE-GDITQVDET 67 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 68 RIPDHDILCAGFPCQPFSISG 88 >gi|315653956|ref|ZP_07906872.1| modification methylase EcoRII [Lactobacillus iners ATCC 55195] gi|315488652|gb|EFU78298.1| modification methylase EcoRII [Lactobacillus iners ATCC 55195] Length = 336 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 13 KFIDLFAGIGGFRLALESF----GAKCVYSNEWDKFAQETYHMNFGDTPE-GDITQVDET 67 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 68 RIPDHDILCAGFPCQPFSISG 88 >gi|309809622|ref|ZP_07703479.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners SPIN 2503V10-D] gi|308170103|gb|EFO72139.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners SPIN 2503V10-D] Length = 336 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 13 KFIDLFAGIGGFRLALESF----GAKCVYSNEWDKFAQETYHMNFGDTPE-GDITQVDET 67 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 68 RIPDHDILCAGFPCQPFSISG 88 >gi|309804726|ref|ZP_07698791.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 09V1-c] gi|312871535|ref|ZP_07731628.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 3008A-a] gi|325913106|ref|ZP_08175476.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B] gi|308166118|gb|EFO68336.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 09V1-c] gi|311092930|gb|EFQ51281.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 3008A-a] gi|325477527|gb|EGC80669.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B] Length = 336 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 13 KFIDLFAGIGGFRLALESF----GAKCVYSNEWDKFAQETYHMNFGDTPE-GDITQVDET 67 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 68 RIPDHDILCAGFPCQPFSISG 88 >gi|312874304|ref|ZP_07734336.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2052A-d] gi|311090177|gb|EFQ48589.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2052A-d] Length = 336 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 13 KFIDLFAGIGGFRLALESF----GAKCVYSNEWDKFAQETYHMNFGDTPE-GDITQVDET 67 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 68 RIPDHDILCAGFPCQPFSISG 88 >gi|67922277|ref|ZP_00515790.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67855853|gb|EAM51099.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 226 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 8/89 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE-------CFFSSEINPYSVKTYQANFPNTLIFG 54 LK DLFCGIGG R+ LE +H + C FSS+I+ + K Y+ANF + G Sbjct: 16 LKYIDLFCGIGGFRIALELVCSHYKFKEHKIKPICVFSSDIDADAQKNYEANFKDKPQ-G 74 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI +I + IP+H++LLAGFPCQ FS G Sbjct: 75 DITQIPVELIPNHNLLLAGFPCQTFSICG 103 >gi|113478034|ref|YP_724095.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] gi|110169082|gb|ABG53622.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] Length = 413 Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60 LK +LF GIGG L + N++ ++++++ + YQ+NF ++++ DI KI Sbjct: 29 LKAIELFAGIGGFCLGMRAA----NIKTIWANDVSKLCCQVYQSNFGSSSIVLDDINKIN 84 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +IP+HD+L AGFPCQPFSQAG Sbjct: 85 LLEIPEHDILTAGFPCQPFSQAG 107 >gi|255279955|ref|ZP_05344510.1| modification methylase EcoRII [Bryantella formatexigens DSM 14469] gi|255269728|gb|EET62933.1| modification methylase EcoRII [Bryantella formatexigens DSM 14469] Length = 311 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIGG L++ F + ++++ + Y+V+TY+ANF ++ GDI +I Sbjct: 1 MKVVSLFSGIGG----LDRGFLDTGYDVIWANDFDKYAVQTYKANFGEHIVLGDINEIPL 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +IPD DVL+ GFPCQPFS G Sbjct: 57 DEIPDCDVLIGGFPCQPFSMMG 78 >gi|85709931|ref|ZP_01040996.1| Type II restriction-modification system methylation subunit [Erythrobacter sp. NAP1] gi|85688641|gb|EAQ28645.1| Type II restriction-modification system methylation subunit [Erythrobacter sp. NAP1] Length = 370 Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 11/81 (13%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAKIKTQ 62 DLF GIGG+R+ F+ EC FSSE + ++ TY+ NF PN GDI KI Sbjct: 26 DLFAGIGGMRI----PFDELGGECTFSSEWDKFAQDTYELNFGHRPN----GDITKIDAS 77 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 ++ HD+LL GFPCQ FS AG Sbjct: 78 EVGAHDILLGGFPCQAFSNAG 98 >gi|331002097|ref|ZP_08325616.1| hypothetical protein HMPREF0491_00478 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411191|gb|EGG90607.1| hypothetical protein HMPREF0491_00478 [Lachnospiraceae oral taxon 107 str. F0167] Length = 706 Score = 74.7 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 11/85 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 LK DLF GIGG RL E +C FSSEI+ ++ + Y+ NF P DI K Sbjct: 6 LKFIDLFAGIGGFRLGFEDA----GCKCVFSSEIDEHACEMYELNFGENPKC----DITK 57 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + +DIPD D+L AGFPCQ FS G Sbjct: 58 LNIKDIPDFDILCAGFPCQAFSICG 82 >gi|119484300|ref|ZP_01618917.1| modification methylase NlaIV [Lyngbya sp. PCC 8106] gi|119457774|gb|EAW38897.1| modification methylase NlaIV [Lyngbya sp. PCC 8106] Length = 449 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 MLK DLF GIGG+RL E+ + EC +SEI+ + + Y NF + + GDI + Sbjct: 1 MLKFIDLFAGIGGLRLGFERGIASLGLRGECLLASEIDAEASQVYSQNFLH-VPEGDIRQ 59 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 IK+ +P HDVLLAGFPCQ FS AG Sbjct: 60 IKS--LPKHDVLLAGFPCQSFSYAG 82 >gi|119493789|ref|ZP_01624358.1| type II restriction enzyme HaeII [Lyngbya sp. PCC 8106] gi|119452484|gb|EAW33671.1| type II restriction enzyme HaeII [Lyngbya sp. PCC 8106] Length = 689 Score = 74.7 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 40/78 (51%), Positives = 48/78 (61%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGGIRL E+ +C FSSE + + +TY+ANF + GDI I IP Sbjct: 14 DLFAGIGGIRLPFEELGG----KCVFSSEWDEAAQETYEANFGERPL-GDITTIDPGSIP 68 Query: 66 DHDVLLAGFPCQPFSQAG 83 HD+LLAGFPCQ FS G Sbjct: 69 HHDILLAGFPCQAFSIIG 86 >gi|46581246|ref|YP_012054.1| type II DNA modification methyltransferase [Desulfovibrio vulgaris str. Hildenborough] gi|46450667|gb|AAS97314.1| type II DNA modification methyltransferase, putative [Desulfovibrio vulgaris str. Hildenborough] gi|311234912|gb|ADP87766.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1] Length = 358 Score = 74.7 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 41/87 (47%), Positives = 48/87 (55%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF---------GDI 56 DLF GIGGIRL E C S+E + Y+ KTY+A F + F GDI Sbjct: 11 DLFAGIGGIRLGFEAAGG----RCVMSAEYDKYAQKTYRAFFGESPDFSEIMSVSPPGDI 66 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 K+ +PDHDVL GFPCQPFS AG Sbjct: 67 TKLPPHLVPDHDVLTGGFPCQPFSLAG 93 >gi|300717257|ref|YP_003742060.1| cytosine-specific methyltransferase [Erwinia billingiae Eb661] gi|299063093|emb|CAX60213.1| Cytosine-specific methyltransferase [Erwinia billingiae Eb661] Length = 466 Score = 74.7 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N YSV+TY+AN+ P+ F DI Sbjct: 93 FRFIDLFAGIGGIRSGFEAIGG----QCVFTSEWNKYSVRTYKANWYCDPDAHRFNQDIR 148 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 + + +PDHDVLLAGFPCQPFS AG Sbjct: 149 DVTLSGNPAVSEQQAYQHIDKQVPDHDVLLAGFPCQPFSLAG 190 >gi|114571596|ref|YP_758276.1| DNA-cytosine methyltransferase [Maricaulis maris MCS10] gi|114342058|gb|ABI67338.1| DNA-cytosine methyltransferase [Maricaulis maris MCS10] Length = 406 Score = 74.7 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + DLF GIGG+RL E +C F+SE + +S +TY+ANF + GDI Sbjct: 66 FRFIDLFAGIGGLRLGFEAIGG----KCVFTSEWDVHSQRTYRANFLDDDSHTFAGDIRP 121 Query: 59 IKT--QDIPDHDVLLAGFPCQPFSQAG 83 T +P+HDVLLAGFPCQPFS AG Sbjct: 122 YGTDPSKVPEHDVLLAGFPCQPFSLAG 148 >gi|153870185|ref|ZP_01999636.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] gi|152073352|gb|EDN70367.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] Length = 235 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/78 (51%), Positives = 48/78 (61%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGGIRL E +C FSSE + Y+ TY+ANF GDI KI + IP Sbjct: 8 DLFAGIGGIRLGFESI----GGKCVFSSEWDKYAQDTYEANFGERPE-GDITKINAKTIP 62 Query: 66 DHDVLLAGFPCQPFSQAG 83 +H++LL GFPCQ FS G Sbjct: 63 EHNILLGGFPCQAFSICG 80 >gi|193216537|ref|YP_001999779.1| cytosine-specific methyltransferase, related to HhaI [Mycoplasma arthritidis 158L3-1] gi|193001860|gb|ACF07075.1| cytosine-specific methyltransferase, related to HhaI [Mycoplasma arthritidis 158L3-1] Length = 327 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF G+GG R+ LE +C +S+E + ++ + Y+ NF N + GDI I Sbjct: 12 LKFIDLFAGLGGFRIALESC----GAKCVYSNEWDKHAQEVYKMNF-NEIPDGDITLINE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHDVL AGFPCQ FS +G Sbjct: 67 NDIPDHDVLCAGFPCQAFSISG 88 >gi|228469904|ref|ZP_04054843.1| cytosine-specific methyltransferase NlaX [Porphyromonas uenonis 60-3] gi|228308539|gb|EEK17327.1| cytosine-specific methyltransferase NlaX [Porphyromonas uenonis 60-3] Length = 395 Score = 74.7 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 39/90 (43%), Positives = 48/90 (53%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--------FPNTLIF 53 L DLF GIGG L + +C F+SE + Y+ +TY+AN F L Sbjct: 34 LTFIDLFAGIGGFHLAMHSV----GAQCVFASEWDQYARQTYEANYRKLAPELFSRGLFA 89 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GDI K+ IP D+L AGFPCQPFS AG Sbjct: 90 GDITKVDPASIPPFDILCAGFPCQPFSVAG 119 >gi|78778033|ref|YP_394348.1| DNA (cytosine-5-)-methyltransferase., Type II site-specific deoxyribonuclease [Sulfurimonas denitrificans DSM 1251] gi|78498573|gb|ABB45113.1| DNA (cytosine-5-)-methyltransferase., Type II site-specific deoxyribonuclease [Sulfurimonas denitrificans DSM 1251] Length = 657 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/86 (48%), Positives = 50/86 (58%), Gaps = 12/86 (13%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--------NTLIFGDIA 57 DLF GIGG Q + EC F+SEI+ Y+ KTY+ NF N L DI Sbjct: 10 DLFAGIGG----FHQAMHELGGECVFASEIDIYARKTYKYNFKKYSPELFENGLFNEDIK 65 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 I ++IPD D+L AGFPCQPFSQAG Sbjct: 66 TIMPEEIPDFDLLCAGFPCQPFSQAG 91 >gi|170769440|ref|ZP_02903893.1| DNA-cytosine methyltransferase [Escherichia albertii TW07627] gi|170121764|gb|EDS90695.1| DNA-cytosine methyltransferase [Escherichia albertii TW07627] Length = 472 Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 55/102 (53%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANYYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDAAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|259909642|ref|YP_002649998.1| DNA cytosine methylase [Erwinia pyrifoliae Ep1/96] gi|224965264|emb|CAX56796.1| Cytosine-specific methyltransferase [Erwinia pyrifoliae Ep1/96] gi|261863687|gb|ACY01298.1| unknown [Erwinia pyrifoliae] gi|283479721|emb|CAY75637.1| DNA cytosine methylase [Erwinia pyrifoliae DSM 12163] Length = 473 Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR E+ +C F+SE N +V+TY+AN+ N Sbjct: 96 FRFIDLFAGIGGIRKGFEEIGG----QCVFTSEWNKDAVRTYKANWYNDEEVHRFNFDIR 151 Query: 50 TLIFGDIAKIKTQD--------IPDHDVLLAGFPCQPFSQAG 83 + D +++ D IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDRPEVREDDAYRNIDKEIPDHDVLLAGFPCQPFSLAG 193 >gi|269122857|ref|YP_003305434.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] gi|268314183|gb|ACZ00557.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] Length = 329 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF G+GG RL LE EC +S+E + + K YQ NF + + GDI I Sbjct: 12 LKFIDLFAGLGGFRLSLESF----GAECVYSNEWDKNAQKVYQMNFGD-MPEGDITLIDE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +IPDHD+L AGFPCQ FS +G Sbjct: 67 NNIPDHDILCAGFPCQAFSISG 88 >gi|150400370|ref|YP_001324137.1| DNA-cytosine methyltransferase [Methanococcus vannielii SB] gi|150013073|gb|ABR55525.1| DNA-cytosine methyltransferase [Methanococcus vannielii SB] Length = 368 Score = 73.9 bits (180), Expect = 6e-12, Method: Composition-based stats. Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLE-------QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 K+ LF G GG+ L + Q + H E FS++I+ + +TY++NF ++ + Sbjct: 35 FKVISLFSGCGGMDLGFKGGFEIFKQHYEHNPYEIIFSNDISDKACRTYESNFCHSSVCA 94 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI IK +DIP+ D+++ GFPCQ FS AG Sbjct: 95 DIKDIKNEDIPNADIVIGGFPCQDFSHAG 123 >gi|26554428|ref|NP_758362.1| cytosine-specific DNA methylase [Mycoplasma penetrans HF-2] gi|26454438|dbj|BAC44766.1| cytosine-specific DNA methylase [Mycoplasma penetrans HF-2] Length = 426 Score = 73.9 bits (180), Expect = 6e-12, Method: Composition-based stats. Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 7/88 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKTYQANFP----NTLIFGD 55 +K DLF GIGG LE+ N+ N+EC F SEI+ ++KTY +NF + D Sbjct: 4 IKFIDLFAGIGGFHKALERVAKKNNFNIECVFVSEIDNEAIKTYSSNFSVDKEKIINIRD 63 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + + +Q +PDHD L AGFPCQ FS AG Sbjct: 64 LDESASQ-VPDHDFLFAGFPCQTFSNAG 90 >gi|288559284|ref|YP_003422770.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1] gi|288541994|gb|ADC45878.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1] Length = 339 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGG RL E +C FSS+I+ ++ +TY NF GDI++I IP Sbjct: 34 DLFSGIGGFRLAFESV----GGKCVFSSDIDKWANETYYMNF-GEYPHGDISEIPANQIP 88 Query: 66 DHDVLLAGFPCQPFSQAG 83 DHD+L AGFPCQPFS G Sbjct: 89 DHDILCAGFPCQPFSIGG 106 >gi|50513617|pdb|1SVU|A Chain A, Structure Of The Q237w Mutant Of Hhai Dna Methyltransferase: An Insight Into Protein-Protein Interactions gi|50513618|pdb|1SVU|B Chain B, Structure Of The Q237w Mutant Of Hhai Dna Methyltransferase: An Insight Into Protein-Protein Interactions Length = 327 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKPE-GDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|300869073|ref|ZP_07113674.1| Cytosine-specific methyltransferase (fragment) [Oscillatoria sp. PCC 6506] gi|300332930|emb|CBN58870.1| Cytosine-specific methyltransferase (fragment) [Oscillatoria sp. PCC 6506] Length = 345 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 39/82 (47%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGG R Q F + EC FS E++ + + Y NF N + FGDI + Sbjct: 1 MKFIDLFAGIGGFR----QGFENAGFECVFSCEVDKHCREVYSNNF-NEVPFGDIKDVNP 55 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +I D DVL+AGFPCQPFS G Sbjct: 56 HEIEDFDVLVAGFPCQPFSICG 77 >gi|118138268|pdb|2I9K|A Chain A, Engineered Extrahelical Base Destabilization Enhances Sequence Discrimination Of Dna Methyltransferase M.Hhai Length = 327 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKPE-GDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|12084381|pdb|1FJX|A Chain A, Structure Of Ternary Complex Of Hhai Methyltransferase Mutant (T250g) In Complex With Dna And Adohcy gi|85544394|pdb|2C7R|A Chain A, Hhai Dna Methyltransferase (T250g Mutant) Complex With Oligonucleotide Containing 2-Aminopurine As A Target Base (Gpgc:gmgc) And Sah Length = 327 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKPE-GDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|160877870|pdb|2Z6U|A Chain A, Ternary Structure Of The Glu119ala M.Hhai, C5-Cytosine Dna Methyltransferase, With Unmodified Dna And Adohcy Length = 327 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKPE-GDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|127455|sp|P05102|MTH1_HAEPH RecName: Full=Modification methylase HhaI; Short=M.HhaI; AltName: Full=Cytosine-specific methyltransferase HhaI gi|1065144|pdb|1MHT|A Chain A, Covalent Ternary Structure Of Hhai Methyltransferase, Dna And S-Adenosyl-L-Homocysteine gi|1942412|pdb|3MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Unmodified Dna And Adohcy gi|1942415|pdb|4MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Native Dna And Adohcy gi|2392799|pdb|5MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Hemimethylated Dna And Adohcy gi|3660437|pdb|6MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Adohcy And Dna Containing 4'-Thio-2'deoxycytidine At The Target gi|4139672|pdb|7MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX gi|4139675|pdb|8MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX gi|4139680|pdb|9MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX gi|4558252|pdb|10MH|A Chain A, Ternary Structure Of Hhai Methyltransferase With Adohcy And Hemimethylated Dna Containing 5,6-Dihydro-5-Azacytosine At The Target gi|4699814|pdb|2HMY|B Chain B, Binary Complex Of Hhai Methyltransferase With Adomet Formed In The Presence Of A Short Nonpsecific Dna Oligonucleotide gi|24158912|pdb|1M0E|A Chain A, Zebularine: A Novel Dna Methylation Inhibitor That Forms A Covalent Complex With Dna Methyltransferase gi|52695513|pdb|1SKM|A Chain A, Hhai Methyltransferase In Complex With Dna Containing An Abasic South Carbocyclic Sugar At Its Target Site gi|85544385|pdb|2C7O|A Chain A, Hhai Dna Methyltransferase Complex With 13mer Oligonucleotide Containing 2-Aminopurine Adjacent To The Target Base (Pcgc:gmgc) And Sah gi|85544388|pdb|2C7P|A Chain A, Hhai Dna Methyltransferase Complex With Oligonucleotide Containing 2-Aminopurine Opposite To The Target Base ( Gcgc:gmpc) And Sah gi|85544391|pdb|2C7Q|A Chain A, Hhai Dna Methyltransferase Complex With Oligonucleotide Containing 2-Aminopurine Outside The Recognition Sequence (Paired With G) And Sah gi|116667789|pdb|2HR1|A Chain A, Ternary Structure Of Wt M.Hhai C5-Cytosine Dna Methyltransferase With Unmodified Dna And Adohcy gi|157831356|pdb|1HMY|A Chain A, Crystal Structure Of The Hhal Dna Methyltransferase Complexed With S-Adenosyl-L-Methionine gi|290560089|pdb|3EEO|A Chain A, M. Hhai Co-Crystallized With Synthetic Dsdna Containing A Propane Diol In Place Of The Deoxycytidine Residue Targeted For Methylation. gi|148949|gb|AAA24989.1| DNA methylase [Haemophilus haemolyticus] Length = 327 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKPE-GDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|161761159|pdb|2ZCJ|A Chain A, Ternary Structure Of The Glu119gln M.Hhai, C5-Cytosine Dna Methyltransferase, With Unmodified Dna And Adohcy Length = 327 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKPE-GDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|158431504|pdb|2Z6Q|A Chain A, Ternary Structure Of Arg165ala M.Hhai C5-Cytosine Dna Methyltransferase With Unmodified Dna And Adohcy Length = 327 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKPE-GDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|189339547|pdb|2UZ4|A Chain A, Hhai Dna Methyltransferase R165n Mutant Complex With 13mer Gcgc-Gmgc Oligonucleotide And Sah Length = 327 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKPE-GDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|189096047|pdb|2UYC|A Chain A, Hhai Dna Methyltransferase R163n Mutant Complex With 13mer Gcgc-Gmgc Oligonucleotide And Sah Length = 327 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKPE-GDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|296282358|ref|ZP_06860356.1| DNA-cytosine methyltransferase [Citromicrobium bathyomarinum JL354] Length = 439 Score = 73.6 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKI- 59 + DLF GIGG+R+ + H C F+SE + ++ +TY+ NF N + GD+ + Sbjct: 90 FRFIDLFAGIGGLRIGFQGIGGH----CVFTSEWDRFAQETYRVNFRDNHKLHGDVREFA 145 Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83 + IP+HDVLL GFPCQPFS AG Sbjct: 146 ENPELIPEHDVLLGGFPCQPFSLAG 170 >gi|312873586|ref|ZP_07733633.1| modification methylase BanI [Lactobacillus iners LEAF 2052A-d] gi|311090839|gb|EFQ49236.1| modification methylase BanI [Lactobacillus iners LEAF 2052A-d] Length = 487 Score = 73.6 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 9/83 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANF---PNTLIFGDIAKIK 60 DLF G+GGIRL E+ + +C FSS+I ++ Y+ NF P DI KI Sbjct: 74 DLFSGLGGIRLGFEEALTDYGLTGKCVFSSDIKESAITAYKTNFGENPKC----DITKIN 129 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++P+ D LLAGFPCQ FSQAG Sbjct: 130 PTNLPNFDFLLAGFPCQAFSQAG 152 >gi|294155594|ref|YP_003559978.1| cytosine-specific DNA modification methyltransferase [Mycoplasma crocodyli MP145] gi|291600134|gb|ADE19630.1| cytosine-specific DNA modification methyltransferase [Mycoplasma crocodyli MP145] Length = 388 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 40/82 (48%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG Q ++ EC FSSEI+ Y + TY NF + F DI K+ Sbjct: 6 FKFIDLFSGIGG----FHQAMSYFGGECVFSSEIDKYCINTYFNNFNISSDF-DITKVNV 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +IP HD+L AGFPCQ FS+AG Sbjct: 61 NEIPKHDLLCAGFPCQAFSKAG 82 >gi|327254549|gb|EGE66165.1| modification methylase EcoRII [Escherichia coli STEC_7v] Length = 474 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52 + DLF GIGGIR + F + +C F+SE N +V+TY+AN+ N + Sbjct: 96 FRFIDLFAGIGGIR----KGFENIGGQCVFTSEWNKEAVRTYKANWFNDELNHKFNLDIR 151 Query: 53 ------FGDIAKIKT-----QDIPDHDVLLAGFPCQPFSQAG 83 D+++++ ++IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDRDDVSEVEAYNHIDKNIPDHDVLLAGFPCQPFSLAG 193 >gi|167465361|ref|ZP_02330450.1| DNA-cytosine methyltransferase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 432 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M +LF GIGG R L+Q C F+SEI+ ++ +Y+A + + GDI KI Sbjct: 1 MFTYVELFAGIGGFRSALDQLGG----ICTFASEIDKFATISYRAMYDGAPELCGDITKI 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 D+PDHD+L+ GFPCQ FS AG Sbjct: 57 DASDVPDHDLLVGGFPCQAFSVAG 80 >gi|331668651|ref|ZP_08369499.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA271] gi|331063845|gb|EGI35756.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA271] Length = 458 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 73 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 128 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 129 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 170 >gi|323152708|gb|EFZ38980.1| DNA-cytosine methyltransferase [Escherichia coli EPECa14] Length = 374 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|315290247|gb|EFU49625.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 153-1] Length = 478 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 93 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 148 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 149 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 190 >gi|331673470|ref|ZP_08374238.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA280] gi|331069668|gb|EGI41055.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA280] Length = 472 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|300923873|ref|ZP_07139889.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 182-1] gi|300419870|gb|EFK03181.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 182-1] Length = 477 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 92 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 148 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189 >gi|157145245|ref|YP_001452564.1| DNA cytosine methylase [Citrobacter koseri ATCC BAA-895] gi|157082450|gb|ABV12128.1| hypothetical protein CKO_00981 [Citrobacter koseri ATCC BAA-895] Length = 477 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 92 FRFVDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYYCDPQRHHFNEDIR 147 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 148 DITLSHRDGVSDSEAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189 >gi|229126345|ref|ZP_04255362.1| Cytosine-specific methyltransferase [Bacillus cereus BDRD-Cer4] gi|228657116|gb|EEL12937.1| Cytosine-specific methyltransferase [Bacillus cereus BDRD-Cer4] Length = 363 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ LF G GG+ L LEQ E ++++++ ++V+ Y+ N ++ GDI KI Sbjct: 8 LKVVSLFSGCGGLDLGLEQA----GFEILWANDVDKHAVEIYKHNI-GKIVEGDITKISE 62 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++IP DVL AGFPCQPFS AG Sbjct: 63 EEIPSCDVLTAGFPCQPFSSAG 84 >gi|300940416|ref|ZP_07155001.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 21-1] gi|300454810|gb|EFK18303.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 21-1] Length = 476 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 188 >gi|300899219|ref|ZP_07117494.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 198-1] gi|300357175|gb|EFJ73045.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 198-1] Length = 477 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 92 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 148 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189 >gi|301050676|ref|ZP_07197538.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 185-1] gi|300297633|gb|EFJ54018.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 185-1] Length = 477 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 92 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 148 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189 >gi|238919389|ref|YP_002932904.1| DNA cytosine methylase [Edwardsiella ictaluri 93-146] gi|238868958|gb|ACR68669.1| modification methylase [Edwardsiella ictaluri 93-146] Length = 471 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIA 57 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N DI Sbjct: 94 FRFIDLFAGIGGIR----KGFESIGGQCVFTSEWNKEAVRTYKANWYNDEDLHTFNMDIR 149 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 +I Q IPDHDVLLAGFPCQPFS AG Sbjct: 150 EITLSAESDISEHDAYKNINQHIPDHDVLLAGFPCQPFSLAG 191 >gi|82776352|ref|YP_402701.1| DNA cytosine methylase [Shigella dysenteriae Sd197] gi|309789422|ref|ZP_07684012.1| DNA-cytosine methyltransferase [Shigella dysenteriae 1617] gi|81240500|gb|ABB61210.1| DNA cytosine methylase [Shigella dysenteriae Sd197] gi|308922816|gb|EFP68333.1| DNA-cytosine methyltransferase [Shigella dysenteriae 1617] Length = 472 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHRFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|74312499|ref|YP_310918.1| DNA cytosine methylase [Shigella sonnei Ss046] gi|73855976|gb|AAZ88683.1| DNA cytosine methylase [Shigella sonnei Ss046] gi|323168918|gb|EFZ54598.1| DNA-cytosine methyltransferase [Shigella sonnei 53G] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|300994233|ref|ZP_07180788.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1] gi|300304943|gb|EFJ59463.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1] Length = 477 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 92 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 148 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189 >gi|284921868|emb|CBG34943.1| DNA-cytosine methyltransferase [Escherichia coli 042] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKDGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|315296465|gb|EFU55762.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 16-3] Length = 476 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 188 >gi|315286667|gb|EFU46100.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 110-3] Length = 475 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 90 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 145 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 146 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 187 >gi|331663456|ref|ZP_08364366.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA143] gi|331059255|gb|EGI31232.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA143] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|331658007|ref|ZP_08358969.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA206] gi|331056255|gb|EGI28264.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA206] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|300975476|ref|ZP_07173024.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 45-1] gi|300410366|gb|EFJ93904.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 45-1] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|293410317|ref|ZP_06653893.1| conserved hypothetical protein [Escherichia coli B354] gi|291470785|gb|EFF13269.1| conserved hypothetical protein [Escherichia coli B354] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKDGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|289423024|ref|ZP_06424844.1| putative site-specific DNA-methyltransferase [Peptostreptococcus anaerobius 653-L] gi|289156598|gb|EFD05243.1| putative site-specific DNA-methyltransferase [Peptostreptococcus anaerobius 653-L] Length = 706 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 11/85 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 LK DLF GIGG RL E +C FSSEI+ ++ + Y+ NF P DI + Sbjct: 6 LKFIDLFAGIGGFRLGFENA----GCKCVFSSEIDDHACEMYELNFGENPRC----DITQ 57 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + +DIPD D+L AGFPCQ FS G Sbjct: 58 LNPKDIPDFDILCAGFPCQAFSICG 82 >gi|82543581|ref|YP_407528.1| DNA cytosine methylase [Shigella boydii Sb227] gi|81244992|gb|ABB65700.1| DNA cytosine methylase [Shigella boydii Sb227] gi|332096894|gb|EGJ01883.1| DNA-cytosine methyltransferase [Shigella boydii 3594-74] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|157158517|ref|YP_001463262.1| DNA cytosine methylase [Escherichia coli E24377A] gi|157080547|gb|ABV20255.1| DNA-cytosine methyltransferase [Escherichia coli E24377A] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|187732725|ref|YP_001879611.1| DNA cytosine methylase [Shigella boydii CDC 3083-94] gi|293446340|ref|ZP_06662762.1| DNA-cytosine methyltransferase [Escherichia coli B088] gi|187429717|gb|ACD08991.1| DNA-cytosine methyltransferase [Shigella boydii CDC 3083-94] gi|291323170|gb|EFE62598.1| DNA-cytosine methyltransferase [Escherichia coli B088] gi|320175451|gb|EFW50550.1| DNA-cytosine methyltransferase [Shigella dysenteriae CDC 74-1112] gi|320184499|gb|EFW59303.1| DNA-cytosine methyltransferase [Shigella flexneri CDC 796-83] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|330911766|gb|EGH40276.1| DNA-cytosine methyltransferase [Escherichia coli AA86] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|323962004|gb|EGB57603.1| DNA-cytosine methyltransferase [Escherichia coli H489] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|320641809|gb|EFX11197.1| DNA cytosine methylase [Escherichia coli O157:H7 str. G5101] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAVEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|320182772|gb|EFW57655.1| DNA-cytosine methyltransferase [Shigella boydii ATCC 9905] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEDVSDEGAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|309795932|ref|ZP_07690345.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 145-7] gi|308120382|gb|EFO57644.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 145-7] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|331653374|ref|ZP_08354379.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M718] gi|331049472|gb|EGI21544.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M718] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|301029418|ref|ZP_07192512.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 196-1] gi|299877722|gb|EFI85933.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 196-1] Length = 476 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 188 >gi|238917714|ref|YP_002931231.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC 27750] gi|238873074|gb|ACR72784.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC 27750] Length = 311 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ F G+GG L++ F + ++++ + Y+V+TY+ANF ++ GDI +I Sbjct: 1 MKVVSFFSGLGG----LDKGFVDTGYDIIWANDFDKYAVQTYKANFGEHIVLGDINEIPL 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++IPD D+L+ GFPCQPFS G Sbjct: 57 EEIPDCDILIGGFPCQPFSMMG 78 >gi|218554541|ref|YP_002387454.1| DNA cytosine methylase [Escherichia coli IAI1] gi|260868553|ref|YP_003234955.1| DNA cytosine methylase [Escherichia coli O111:H- str. 11128] gi|218361309|emb|CAQ98893.1| DNA cytosine methylase [Escherichia coli IAI1] gi|257764909|dbj|BAI36404.1| DNA cytosine methylase [Escherichia coli O111:H- str. 11128] gi|323180787|gb|EFZ66327.1| DNA-cytosine methyltransferase [Escherichia coli 1180] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|189096062|pdb|2UYH|A Chain A, Hhai Dna Methyltransferase S87q-Q237s Mutant Complex With 13mer Gcgc-Gmgc Oligonucleotide And Sah Length = 327 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKPE-GDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS G Sbjct: 67 KTIPDHDILCAGFPCQAFSIQG 88 >gi|188494720|ref|ZP_03001990.1| DNA-cytosine methyltransferase [Escherichia coli 53638] gi|188489919|gb|EDU65022.1| DNA-cytosine methyltransferase [Escherichia coli 53638] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|91211180|ref|YP_541166.1| DNA cytosine methylase [Escherichia coli UTI89] gi|117624099|ref|YP_853012.1| DNA cytosine methylase [Escherichia coli APEC O1] gi|218558817|ref|YP_002391730.1| DNA cytosine methylase [Escherichia coli S88] gi|91072754|gb|ABE07635.1| DNA cytosine methylase [Escherichia coli UTI89] gi|115513223|gb|ABJ01298.1| DNA cytosine methylase [Escherichia coli APEC O1] gi|218365586|emb|CAR03313.1| DNA cytosine methylase [Escherichia coli S88] gi|294492656|gb|ADE91412.1| DNA-cytosine methyltransferase [Escherichia coli IHE3034] gi|307626564|gb|ADN70868.1| DNA cytosine methylase [Escherichia coli UM146] gi|323952452|gb|EGB48325.1| DNA-cytosine methyltransferase [Escherichia coli H252] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|24113334|ref|NP_707844.1| DNA cytosine methylase [Shigella flexneri 2a str. 301] gi|30063396|ref|NP_837567.1| DNA cytosine methylase [Shigella flexneri 2a str. 2457T] gi|110805927|ref|YP_689447.1| DNA cytosine methylase [Shigella flexneri 5 str. 8401] gi|24052347|gb|AAN43551.1| DNA cytosine methylase [Shigella flexneri 2a str. 301] gi|30041648|gb|AAP17376.1| DNA cytosine methylase [Shigella flexneri 2a str. 2457T] gi|110615475|gb|ABF04142.1| DNA cytosine methylase [Shigella flexneri 5 str. 8401] gi|281601397|gb|ADA74381.1| Cytosine-specific methyltransferase [Shigella flexneri 2002017] gi|313650184|gb|EFS14597.1| DNA-cytosine methyltransferase [Shigella flexneri 2a str. 2457T] gi|332756118|gb|EGJ86471.1| DNA-cytosine methyltransferase [Shigella flexneri 4343-70] gi|332757312|gb|EGJ87649.1| DNA-cytosine methyltransferase [Shigella flexneri 2747-71] gi|332757528|gb|EGJ87863.1| DNA-cytosine methyltransferase [Shigella flexneri K-671] gi|332766700|gb|EGJ96904.1| cytosine-specific methyltransferase [Shigella flexneri 2930-71] gi|333003060|gb|EGK22614.1| DNA-cytosine methyltransferase [Shigella flexneri VA-6] gi|333003307|gb|EGK22853.1| DNA-cytosine methyltransferase [Shigella flexneri K-218] gi|333004068|gb|EGK23602.1| DNA-cytosine methyltransferase [Shigella flexneri K-272] gi|333017687|gb|EGK36999.1| DNA-cytosine methyltransferase [Shigella flexneri K-304] gi|333017841|gb|EGK37148.1| DNA-cytosine methyltransferase [Shigella flexneri K-227] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|26248232|ref|NP_754272.1| DNA cytosine methylase [Escherichia coli CFT073] gi|227885611|ref|ZP_04003416.1| DNA cytosine methylase [Escherichia coli 83972] gi|237705920|ref|ZP_04536401.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA] gi|331647554|ref|ZP_08348646.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M605] gi|26108636|gb|AAN80839.1|AE016762_92 DNA-cytosine methyltransferase [Escherichia coli CFT073] gi|226900677|gb|EEH86936.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA] gi|227837184|gb|EEJ47650.1| DNA cytosine methylase [Escherichia coli 83972] gi|281179022|dbj|BAI55352.1| DNA cytosine methylase [Escherichia coli SE15] gi|307553973|gb|ADN46748.1| DNA cytosine methylase [Escherichia coli ABU 83972] gi|320194327|gb|EFW68958.1| DNA-cytosine methyltransferase [Escherichia coli WV_060327] gi|323956356|gb|EGB52099.1| DNA-cytosine methyltransferase [Escherichia coli H263] gi|324005878|gb|EGB75097.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 57-2] gi|331043278|gb|EGI15416.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M605] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|15802395|ref|NP_288421.1| DNA cytosine methylase [Escherichia coli O157:H7 EDL933] gi|15831953|ref|NP_310726.1| DNA cytosine methylase [Escherichia coli O157:H7 str. Sakai] gi|16129907|ref|NP_416470.1| DNA cytosine methyltransferase [Escherichia coli str. K-12 substr. MG1655] gi|89108792|ref|AP_002572.1| DNA cytosine methylase [Escherichia coli str. K-12 substr. W3110] gi|168752207|ref|ZP_02777229.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4113] gi|168758275|ref|ZP_02783282.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4401] gi|168771615|ref|ZP_02796622.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4486] gi|168777717|ref|ZP_02802724.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4196] gi|168783359|ref|ZP_02808366.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4076] gi|168789321|ref|ZP_02814328.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC869] gi|168801737|ref|ZP_02826744.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC508] gi|170081604|ref|YP_001730924.1| DNA cytosine methylase [Escherichia coli str. K-12 substr. DH10B] gi|195939267|ref|ZP_03084649.1| DNA cytosine methylase [Escherichia coli O157:H7 str. EC4024] gi|208810340|ref|ZP_03252216.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4206] gi|208816602|ref|ZP_03257722.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4045] gi|208821263|ref|ZP_03261583.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4042] gi|209400193|ref|YP_002271076.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4115] gi|209919382|ref|YP_002293466.1| DNA cytosine methylase [Escherichia coli SE11] gi|217328629|ref|ZP_03444710.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. TW14588] gi|218689956|ref|YP_002398168.1| DNA cytosine methylase [Escherichia coli ED1a] gi|238901165|ref|YP_002926961.1| DNA cytosine methylase [Escherichia coli BW2952] gi|253773091|ref|YP_003035922.1| DNA cytosine methylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254793611|ref|YP_003078448.1| DNA cytosine methylase [Escherichia coli O157:H7 str. TW14359] gi|256017846|ref|ZP_05431711.1| DNA cytosine methylase [Shigella sp. D9] gi|261227545|ref|ZP_05941826.1| DNA cytosine methylase [Escherichia coli O157:H7 str. FRIK2000] gi|261254631|ref|ZP_05947164.1| DNA cytosine methylase [Escherichia coli O157:H7 str. FRIK966] gi|293415271|ref|ZP_06657914.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185] gi|300818618|ref|ZP_07098826.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 107-1] gi|300920181|ref|ZP_07136630.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 115-1] gi|301327749|ref|ZP_07220953.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1] gi|301644580|ref|ZP_07244570.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 146-1] gi|307312454|ref|ZP_07592088.1| DNA-cytosine methyltransferase [Escherichia coli W] gi|312973821|ref|ZP_07787993.1| DNA-cytosine methyltransferase [Escherichia coli 1827-70] gi|332278872|ref|ZP_08391285.1| DNA cytosine methylase [Shigella sp. D9] gi|83305674|sp|P0AEE0|DCM_ECO57 RecName: Full=DNA-cytosine methyltransferase gi|83305675|sp|P0AED9|DCM_ECOLI RecName: Full=DNA-cytosine methyltransferase; AltName: Full=M.EcoDcm gi|12516070|gb|AAG56975.1|AE005418_3 DNA cytosine methylase [Escherichia coli O157:H7 str. EDL933] gi|41239|emb|CAA31705.1| unnamed protein product [Escherichia coli K-12] gi|145719|gb|AAA03723.1| DNA cytosine methylase [Escherichia coli] gi|1736630|dbj|BAA15788.1| DNA cytosine methylase [Escherichia coli str. K12 substr. W3110] gi|1788271|gb|AAC75027.1| DNA cytosine methyltransferase [Escherichia coli str. K-12 substr. MG1655] gi|13362167|dbj|BAB36122.1| DNA cytosine methylase [Escherichia coli O157:H7 str. Sakai] gi|169889439|gb|ACB03146.1| DNA cytosine methylase [Escherichia coli str. K-12 substr. DH10B] gi|187767102|gb|EDU30946.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4196] gi|188013903|gb|EDU52025.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4113] gi|188999305|gb|EDU68291.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4076] gi|189354901|gb|EDU73320.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4401] gi|189359668|gb|EDU78087.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4486] gi|189371047|gb|EDU89463.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC869] gi|189376137|gb|EDU94553.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC508] gi|208724856|gb|EDZ74563.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4206] gi|208730945|gb|EDZ79634.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4045] gi|208741386|gb|EDZ89068.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4042] gi|209161593|gb|ACI39026.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4115] gi|209766668|gb|ACI81646.1| DNA cytosine methylase [Escherichia coli] gi|209766670|gb|ACI81647.1| DNA cytosine methylase [Escherichia coli] gi|209766672|gb|ACI81648.1| DNA cytosine methylase [Escherichia coli] gi|209766676|gb|ACI81650.1| DNA cytosine methylase [Escherichia coli] gi|209912641|dbj|BAG77715.1| DNA cytosine methylase [Escherichia coli SE11] gi|217317976|gb|EEC26403.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. TW14588] gi|218427520|emb|CAR08415.2| DNA cytosine methylase [Escherichia coli ED1a] gi|238860813|gb|ACR62811.1| DNA cytosine methylase [Escherichia coli BW2952] gi|253324135|gb|ACT28737.1| DNA-cytosine methyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254593011|gb|ACT72372.1| DNA cytosine methylase [Escherichia coli O157:H7 str. TW14359] gi|260448927|gb|ACX39349.1| DNA-cytosine methyltransferase [Escherichia coli DH1] gi|291432919|gb|EFF05898.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185] gi|300412803|gb|EFJ96113.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 115-1] gi|300528790|gb|EFK49852.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 107-1] gi|300845711|gb|EFK73471.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1] gi|301077088|gb|EFK91894.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 146-1] gi|306907625|gb|EFN38128.1| DNA-cytosine methyltransferase [Escherichia coli W] gi|310332416|gb|EFP99651.1| DNA-cytosine methyltransferase [Escherichia coli 1827-70] gi|315061260|gb|ADT75587.1| DNA cytosine methylase [Escherichia coli W] gi|315136597|dbj|BAJ43756.1| DNA cytosine methylase [Escherichia coli DH1] gi|320191934|gb|EFW66581.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC1212] gi|320198651|gb|EFW73251.1| DNA-cytosine methyltransferase [Escherichia coli EC4100B] gi|320647167|gb|EFX16000.1| DNA cytosine methylase [Escherichia coli O157:H- str. 493-89] gi|320652452|gb|EFX20750.1| DNA cytosine methylase [Escherichia coli O157:H- str. H 2687] gi|320658054|gb|EFX25816.1| DNA cytosine methylase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658625|gb|EFX26319.1| DNA cytosine methylase [Escherichia coli O55:H7 str. USDA 5905] gi|320668523|gb|EFX35350.1| DNA cytosine methylase [Escherichia coli O157:H7 str. LSU-61] gi|323174657|gb|EFZ60277.1| DNA-cytosine methyltransferase [Escherichia coli LT-68] gi|323183944|gb|EFZ69331.1| DNA-cytosine methyltransferase [Escherichia coli 1357] gi|323378163|gb|ADX50431.1| DNA-cytosine methyltransferase [Escherichia coli KO11] gi|323948336|gb|EGB44323.1| DNA-cytosine methyltransferase [Escherichia coli H120] gi|326342371|gb|EGD66152.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. 1044] gi|326344875|gb|EGD68622.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. 1125] gi|332101224|gb|EGJ04570.1| DNA cytosine methylase [Shigella sp. D9] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|191169235|ref|ZP_03030988.1| DNA-cytosine methyltransferase [Escherichia coli B7A] gi|190900713|gb|EDV60509.1| DNA-cytosine methyltransferase [Escherichia coli B7A] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|110642066|ref|YP_669796.1| DNA cytosine methylase [Escherichia coli 536] gi|191173268|ref|ZP_03034798.1| DNA-cytosine methyltransferase [Escherichia coli F11] gi|110343658|gb|ABG69895.1| DNA-cytosine methyltransferase [Escherichia coli 536] gi|190906385|gb|EDV65994.1| DNA-cytosine methyltransferase [Escherichia coli F11] gi|222033699|emb|CAP76440.1| DNA-cytosine methyltransferase [Escherichia coli LF82] gi|312946553|gb|ADR27380.1| DNA cytosine methylase [Escherichia coli O83:H1 str. NRG 857C] gi|324013473|gb|EGB82692.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 60-1] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|193071315|ref|ZP_03052233.1| DNA-cytosine methyltransferase [Escherichia coli E110019] gi|331683510|ref|ZP_08384111.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H299] gi|192955357|gb|EDV85842.1| DNA-cytosine methyltransferase [Escherichia coli E110019] gi|331079725|gb|EGI50922.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H299] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|149369548|ref|ZP_01889400.1| C-5 cytosine-specific DNA-methylase [unidentified eubacterium SCB49] gi|149356975|gb|EDM45530.1| C-5 cytosine-specific DNA-methylase [unidentified eubacterium SCB49] Length = 421 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 44/86 (51%), Positives = 56/86 (65%), Gaps = 11/86 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 K DLF GIGG R+ L+ N+E C F+SE + YS +TY+ANF + FGDI + Sbjct: 97 FKFIDLFAGIGGFRMALQ------NLEGKCVFTSEWDKYSKQTYKANF-GEIPFGDITRP 149 Query: 60 KTQD-IPDH-DVLLAGFPCQPFSQAG 83 +T+ IPD+ DVL AGFPCQ FS AG Sbjct: 150 QTKSYIPDNFDVLCAGFPCQAFSIAG 175 >gi|331091354|ref|ZP_08340194.1| hypothetical protein HMPREF9477_00837 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404515|gb|EGG84059.1| hypothetical protein HMPREF9477_00837 [Lachnospiraceae bacterium 2_1_46FAA] Length = 391 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG Q ++ EC F+SEI+ Y+++TY+ N+ +I + Sbjct: 5 FKFIDLFAGIGG----FHQAMHNLGGECVFASEIDKYAIETYKTNYGVDAGI-NIRDVHE 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIP+HDVL AGFPCQ FS+AG Sbjct: 60 EDIPEHDVLCAGFPCQAFSKAG 81 >gi|306814216|ref|ZP_07448382.1| DNA cytosine methylase [Escherichia coli NC101] gi|305852375|gb|EFM52826.1| DNA cytosine methylase [Escherichia coli NC101] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|300904853|ref|ZP_07122678.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1] gi|301304244|ref|ZP_07210359.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1] gi|300403236|gb|EFJ86774.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1] gi|300840501|gb|EFK68261.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1] gi|315257206|gb|EFU37174.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|301018179|ref|ZP_07182696.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1] gi|300399832|gb|EFJ83370.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|260855934|ref|YP_003229825.1| DNA cytosine methylase [Escherichia coli O26:H11 str. 11368] gi|300822269|ref|ZP_07102410.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 119-7] gi|257754583|dbj|BAI26085.1| DNA cytosine methylase [Escherichia coli O26:H11 str. 11368] gi|300525152|gb|EFK46221.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 119-7] gi|309702249|emb|CBJ01566.1| DNA-cytosine methyltransferase [Escherichia coli ETEC H10407] gi|323937230|gb|EGB33510.1| DNA-cytosine methyltransferase [Escherichia coli E1520] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|215487159|ref|YP_002329590.1| DNA cytosine methylase [Escherichia coli O127:H6 str. E2348/69] gi|312967158|ref|ZP_07781376.1| DNA-cytosine methyltransferase [Escherichia coli 2362-75] gi|215265231|emb|CAS09622.1| DNA cytosine methylase [Escherichia coli O127:H6 str. E2348/69] gi|312288622|gb|EFR16524.1| DNA-cytosine methyltransferase [Escherichia coli 2362-75] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|170681403|ref|YP_001743285.1| DNA cytosine methylase [Escherichia coli SMS-3-5] gi|170519121|gb|ACB17299.1| DNA-cytosine methyltransferase [Escherichia coli SMS-3-5] gi|324119009|gb|EGC12898.1| DNA-cytosine methyltransferase [Escherichia coli E1167] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|193066646|ref|ZP_03047681.1| DNA-cytosine methyltransferase [Escherichia coli E22] gi|260844359|ref|YP_003222137.1| DNA cytosine methylase [Escherichia coli O103:H2 str. 12009] gi|192925721|gb|EDV80380.1| DNA-cytosine methyltransferase [Escherichia coli E22] gi|257759506|dbj|BAI31003.1| DNA cytosine methylase [Escherichia coli O103:H2 str. 12009] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|157161430|ref|YP_001458748.1| DNA cytosine methylase [Escherichia coli HS] gi|157067110|gb|ABV06365.1| DNA-cytosine methyltransferase [Escherichia coli HS] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|218705454|ref|YP_002412973.1| DNA cytosine methylase [Escherichia coli UMN026] gi|293405443|ref|ZP_06649435.1| DNA cytosine methylase [Escherichia coli FVEC1412] gi|298381087|ref|ZP_06990686.1| DNA cytosine methylase [Escherichia coli FVEC1302] gi|218432551|emb|CAR13444.1| DNA cytosine methylase [Escherichia coli UMN026] gi|291427651|gb|EFF00678.1| DNA cytosine methylase [Escherichia coli FVEC1412] gi|298278529|gb|EFI20043.1| DNA cytosine methylase [Escherichia coli FVEC1302] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|30019096|ref|NP_830727.1| Type II restriction-modification system methylation subunit [Bacillus cereus ATCC 14579] gi|29894639|gb|AAP07928.1| Type II restriction-modification system methylation subunit [Bacillus cereus ATCC 14579] Length = 373 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ LF G GG+ L LEQ E ++++++ ++V+ Y+ N ++ GDI KI Sbjct: 18 LKVVSLFSGCGGLDLGLEQA----GFEILWANDVDKHAVEIYKHNI-GKIVEGDITKISE 72 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++IP DVL AGFPCQPFS AG Sbjct: 73 EEIPSCDVLTAGFPCQPFSSAG 94 >gi|323186716|gb|EFZ72038.1| DNA-cytosine methyltransferase [Escherichia coli RN587/1] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|323158561|gb|EFZ44575.1| DNA-cytosine methyltransferase [Escherichia coli E128010] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|194433657|ref|ZP_03065933.1| DNA-cytosine methyltransferase [Shigella dysenteriae 1012] gi|194418086|gb|EDX34179.1| DNA-cytosine methyltransferase [Shigella dysenteriae 1012] gi|332095525|gb|EGJ00541.1| DNA-cytosine methyltransferase [Shigella dysenteriae 155-74] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEGAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|194430436|ref|ZP_03062919.1| DNA-cytosine methyltransferase [Escherichia coli B171] gi|194411515|gb|EDX27854.1| DNA-cytosine methyltransferase [Escherichia coli B171] Length = 472 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|218695565|ref|YP_002403232.1| DNA cytosine methylase [Escherichia coli 55989] gi|256022383|ref|ZP_05436248.1| DNA cytosine methylase [Escherichia sp. 4_1_40B] gi|218352297|emb|CAU98056.1| DNA cytosine methylase [Escherichia coli 55989] gi|323972739|gb|EGB67939.1| DNA-cytosine methyltransferase [Escherichia coli TA007] gi|332343686|gb|AEE57020.1| DNA-cytosine methyltransferase [Escherichia coli UMNK88] Length = 472 Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|331671799|ref|ZP_08372595.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli TA280] gi|331070788|gb|EGI42147.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli TA280] Length = 474 Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI---FG-DIA 57 + DLF GIGGIR + F + +C F+SE N +V+TY+AN+ N + F DI Sbjct: 96 FRFIDLFAGIGGIR----KGFENIGGQCVFTSEWNKEAVRTYKANWFNDELNHKFNLDIR 151 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDRDDVSEMEAYNHIDKNIPDHDVLLAGFPCQPFSLAG 193 >gi|282899236|ref|ZP_06307209.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii CS-505] gi|281195872|gb|EFA70796.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii CS-505] Length = 422 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 M++ DLF GIGG+RL +Q + VE C SSEI+ +V+TY+ NF + GDI + Sbjct: 1 MIRFIDLFAGIGGMRLGFQQACDVLGVEYECVLSSEIDKKAVETYKINFDDQPR-GDIRE 59 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I +P+ D +LAGFPCQPFS AG Sbjct: 60 IDI--MPEFDFMLAGFPCQPFSYAG 82 >gi|307138628|ref|ZP_07497984.1| DNA cytosine methylase [Escherichia coli H736] gi|331642581|ref|ZP_08343716.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H736] gi|331039379|gb|EGI11599.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H736] Length = 472 Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKDGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|294979850|pdb|3ME5|A Chain A, Crystal Structure Of Putative Dna Cytosine Methylase From Shigella Flexneri 2a Str. 301 Length = 482 Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 89 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 144 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 145 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 186 >gi|188533556|ref|YP_001907353.1| DNA cytosine methylase [Erwinia tasmaniensis Et1/99] gi|188028598|emb|CAO96460.1| DNA-cytosine methyltransferase [Erwinia tasmaniensis Et1/99] Length = 469 Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------------P 48 + DLF GIGGIR E +C F+SE N +SV+TY+AN+ Sbjct: 95 FRFIDLFAGIGGIRSGFEAIGG----QCVFTSEWNKHSVRTYKANWYCDETQHRFNQDIR 150 Query: 49 NTLIFGD-------IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + + GD + Q IPDHDVLLAGFPCQPFS AG Sbjct: 151 DVTLSGDPQVDDREAYQHIQQQIPDHDVLLAGFPCQPFSLAG 192 >gi|256822924|ref|YP_003146887.1| DNA-cytosine methyltransferase [Kangiella koreensis DSM 16069] gi|256796463|gb|ACV27119.1| DNA-cytosine methyltransferase [Kangiella koreensis DSM 16069] Length = 419 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/78 (50%), Positives = 46/78 (58%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGGIRL F C FSSE + TY+ NF FGDI + +++IP Sbjct: 101 DLFAGIGGIRLG----FQKYGGACVFSSEFEKAAQNTYKENF-GEHPFGDITTVPSENIP 155 Query: 66 DHDVLLAGFPCQPFSQAG 83 HD+LL GFPCQ FS AG Sbjct: 156 KHDILLGGFPCQAFSVAG 173 >gi|323968376|gb|EGB63783.1| DNA-cytosine methyltransferase [Escherichia coli M863] gi|327253092|gb|EGE64746.1| DNA-cytosine methyltransferase [Escherichia coli STEC_7v] Length = 472 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIF----- 53 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANYYCDPAVHHFNEDIR 142 Query: 54 ----------GDIAKIK--TQDIPDHDVLLAGFPCQPFSQAG 83 GD A + Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGIGDDAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|323977859|gb|EGB72945.1| DNA-cytosine methyltransferase [Escherichia coli TW10509] Length = 472 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIF----- 53 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANYYCDPAVHHFNEDIR 142 Query: 54 ----------GDIAKIK--TQDIPDHDVLLAGFPCQPFSQAG 83 GD A + Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGIGDDAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|224418923|ref|ZP_03656929.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT 98-5491] gi|253827874|ref|ZP_04870759.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT 98-5491] gi|313142438|ref|ZP_07804631.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT 98-5491] gi|253511280|gb|EES89939.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT 98-5491] gi|313131469|gb|EFR49086.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT 98-5491] Length = 328 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/78 (51%), Positives = 49/78 (62%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGGIR + F C FSSEI+ ++ +TY+AN+ GDI KI+ DIP Sbjct: 27 DLFAGIGGIR----RGFEIEGGTCVFSSEIDKFACQTYEANWGEKPS-GDITKIEACDIP 81 Query: 66 DHDVLLAGFPCQPFSQAG 83 D+LL GFPCQ FS AG Sbjct: 82 KFDILLGGFPCQAFSIAG 99 >gi|167035739|ref|YP_001670970.1| DNA cytosine methylase [Pseudomonas putida GB-1] gi|166862227|gb|ABZ00635.1| DNA-cytosine methyltransferase [Pseudomonas putida GB-1] Length = 447 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 45/98 (45%), Positives = 51/98 (52%), Gaps = 24/98 (24%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGD-IAKIKT 61 DLF GIGGIR EQ C F+SE N +V+TY+AN P + D I K+ Sbjct: 80 DLFAGIGGIRRGFEQ----HGGRCVFTSEWNDQAVRTYKANHYSDPEHHRYNDDIRKVTL 135 Query: 62 QD----------------IPDHDVLLAGFPCQPFSQAG 83 D IPDHDVLLAGFPCQPFS AG Sbjct: 136 SDNDDVSEQDVIASIHRQIPDHDVLLAGFPCQPFSIAG 173 >gi|322383485|ref|ZP_08057261.1| hypothetical protein PL1_3347 [Paenibacillus larvae subsp. larvae B-3650] gi|321152224|gb|EFX45054.1| hypothetical protein PL1_3347 [Paenibacillus larvae subsp. larvae B-3650] Length = 425 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M +LF GIGG R L+Q C F+SEI+ ++ +Y+A + + GDI KI Sbjct: 1 MFTYVELFAGIGGFRSALDQLGG----ICTFASEIDKFATISYRAMYDGAPELHGDITKI 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +D+P+HD+L+ GFPCQ FS AG Sbjct: 57 DAKDVPEHDLLVGGFPCQAFSVAG 80 >gi|56751653|ref|YP_172354.1| hypothetical protein syc1644_d [Synechococcus elongatus PCC 6301] gi|81301269|ref|YP_401477.1| DNA-cytosine methyltransferase [Synechococcus elongatus PCC 7942] gi|56686612|dbj|BAD79834.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81170150|gb|ABB58490.1| DNA-cytosine methyltransferase [Synechococcus elongatus PCC 7942] Length = 424 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 10/84 (11%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKIKTQD 63 DLF GIGG R+ E+ +C F+SE + + KTY+ANF I GDI +I + Sbjct: 75 DLFAGIGGTRMGFERAGG----KCVFTSEWDTSAQKTYRANFSVDEHPIIGDIHEITVEG 130 Query: 64 ----IPDHDVLLAGFPCQPFSQAG 83 +P+HDVL+AGFPCQPFS AG Sbjct: 131 KWDLLPEHDVLVAGFPCQPFSIAG 154 >gi|312281368|ref|YP_004022731.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181897|gb|ADQ42066.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 319 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +++ LF G+GGI L F + ++++I+ Y+ TY++NFP L+ GDI I Sbjct: 4 IRVVSLFSGVGGICL----AFKQAGFDVIWANDIDKYACITYRSNFPTVELVEGDIQSID 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + +IP+ D++ AGFPCQPFS AG Sbjct: 60 SNNIPECDIITAGFPCQPFSIAG 82 >gi|291283137|ref|YP_003499955.1| DNA-cytosine methyltransferase [Escherichia coli O55:H7 str. CB9615] gi|209766674|gb|ACI81649.1| DNA cytosine methylase [Escherichia coli] gi|290763010|gb|ADD56971.1| DNA-cytosine methyltransferase [Escherichia coli O55:H7 str. CB9615] Length = 472 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF G+GGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGVGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|331645413|ref|ZP_08346517.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli M605] gi|331045575|gb|EGI17701.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli M605] Length = 474 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI---FG-DIA 57 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N + F DI Sbjct: 96 FRFIDLFAGIGGIR----KGFESIGGQCVFTSEWNKEAVRTYKANWFNDELNHKFNLDIR 151 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDRDDVSEMEAYNHIDKNIPDHDVLLAGFPCQPFSLAG 193 >gi|167761084|ref|ZP_02433211.1| hypothetical protein CLOSCI_03482 [Clostridium scindens ATCC 35704] gi|167661318|gb|EDS05448.1| hypothetical protein CLOSCI_03482 [Clostridium scindens ATCC 35704] Length = 405 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 7/79 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDI 64 DLF GIGG Q + C F+SEI+ Y ++TYQ N+ ++ I DI + +DI Sbjct: 27 DLFSGIGG----FHQAMSSLGGRCVFASEIDKYCIETYQENYGMDSGI--DIRNVDEKDI 80 Query: 65 PDHDVLLAGFPCQPFSQAG 83 P HDVL AGFPCQ FS+AG Sbjct: 81 PPHDVLCAGFPCQAFSKAG 99 >gi|325499566|gb|EGC97425.1| DNA cytosine methylase [Escherichia fergusonii ECD227] Length = 473 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 96 FRFIDLFAGIGGIR----KGFEAIGGQCVFTSEWNKEAVRTYKANWYNDESSHTFNHDIR 151 Query: 50 --TLIFGDIAKIKT------QDIPDHDVLLAGFPCQPFSQAG 83 TL D K + IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSADDTVSEKQAYAHIQRHIPDHDVLLAGFPCQPFSLAG 193 >gi|324112381|gb|EGC06359.1| DNA-cytosine methyltransferase [Escherichia fergusonii B253] Length = 473 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 96 FRFIDLFAGIGGIR----KGFEAIGGQCVFTSEWNKEAVRTYKANWYNDESSHTFNHDIR 151 Query: 50 --TLIFGDIAKIKT------QDIPDHDVLLAGFPCQPFSQAG 83 TL D K + IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSADDTVSEKQAYAHIQRHIPDHDVLLAGFPCQPFSLAG 193 >gi|323191533|gb|EFZ76794.1| modification methylase EcoRII [Escherichia coli RN587/1] Length = 474 Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI---FG-DIA 57 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N + F DI Sbjct: 96 FRFIDLFAGIGGIR----KGFESIGGQCVFTSEWNKEAVRTYKANWFNDELNHKFNLDIR 151 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDRDDVSEMEAYNHIDKNIPDHDVLLAGFPCQPFSLAG 193 >gi|296538000|gb|ADH30019.1| EcoRII cytosine methylase [Escherichia coli O25b:H4 str. EC958] Length = 477 Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 96 FRFIDLFAGIGGIR----KGFETIGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 151 Query: 50 TLIFGDIAKIKTQD--------IPDHDVLLAGFPCQPFSQAG 83 + D ++ D +PDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 193 >gi|160431610|ref|YP_001551777.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Dublin] gi|298206539|ref|YP_003717476.1| EcoRII modification enzyme [Escherichia coli] gi|159885479|dbj|BAF93082.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Dublin] gi|296537944|gb|ADH29964.1| EcoRII modification enzyme [Escherichia coli O25b:H4 str. EC958] Length = 477 Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 96 FRFIDLFAGIGGIR----KGFETIGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 151 Query: 50 TLIFGDIAKIKTQD--------IPDHDVLLAGFPCQPFSQAG 83 + D ++ D +PDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 193 >gi|113706802|ref|YP_724464.1| DNA cytosine methylase [Escherichia coli] gi|190576899|ref|YP_001966231.1| M.EcoRII DNA methylase [Klebsiella pneumoniae] gi|194433606|ref|ZP_03065883.1| modification methylase EcoRII [Shigella dysenteriae 1012] gi|209901141|ref|YP_002286923.1| DNA cytosine methylase [Klebsiella pneumoniae] gi|209901236|ref|YP_002287017.1| DNA cytosine methylase [Klebsiella pneumoniae] gi|215528089|ref|YP_002332862.1| EcoRII cytosine methylase [Klebsiella pneumoniae] gi|302141639|ref|YP_003813098.1| EcoRII methylase [Klebsiella pneumoniae] gi|127448|sp|P05101|MTE2_ECOLX RecName: Full=Modification methylase EcoRII; Short=M.EcoRII; AltName: Full=Cytosine-specific methyltransferase EcoRII gi|41317|emb|CAA28725.1| unnamed protein product [Escherichia coli HB101] gi|109390538|gb|ABG33840.1| EcoRII modification enzyme [Escherichia coli] gi|110264483|gb|ABG56846.1| M.EcoRII DNA methylase [Klebsiella pneumoniae] gi|165928612|gb|ABY74380.1| EcoRII cytosine methylase [Klebsiella pneumoniae] gi|194418198|gb|EDX34290.1| modification methylase EcoRII [Shigella dysenteriae 1012] gi|197092209|gb|ACH42172.1| EcoRII cytosine methylase [Klebsiella pneumoniae] gi|209574187|gb|ACI63075.1| modification methylase [Klebsiella pneumoniae] gi|209574298|gb|ACI63184.1| modification methylase [Klebsiella pneumoniae] gi|296033904|gb|ADG84867.1| EcoRII methylase [Klebsiella pneumoniae] Length = 477 Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 96 FRFIDLFAGIGGIR----KGFETIGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 151 Query: 50 TLIFGDIAKIKTQD--------IPDHDVLLAGFPCQPFSQAG 83 + D ++ D +PDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 193 >gi|300724477|ref|YP_003713798.1| DNA cytosine methylase [Xenorhabdus nematophila ATCC 19061] gi|297631015|emb|CBJ91699.1| DNA cytosine methylase [Xenorhabdus nematophila ATCC 19061] Length = 476 Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIF-GDIA 57 + DLF GIGGIR E+ +C F+SE N +V+TY+AN+ P +F DI Sbjct: 96 FRFIDLFAGIGGIRKGFEEIGG----QCVFTSEWNKDAVRTYKANWYCDPEEHVFNSDIR 151 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I ++IP+HDVLLAGFPCQPFS AG Sbjct: 152 DITLSHDISVSDKEAYQNIDREIPNHDVLLAGFPCQPFSLAG 193 >gi|297622183|ref|YP_003675732.1| EcoRII cytosine-methyltransferase [Klebsiella oxytoca KOX105] gi|296492002|gb|ADH29504.1| EcoRII cytosine-methyltransferase [Klebsiella oxytoca KOX105] Length = 491 Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 110 FRFIDLFAGIGGIR----KGFETIGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 165 Query: 50 TLIFGDIAKIKTQD--------IPDHDVLLAGFPCQPFSQAG 83 + D ++ D +PDHDVLLAGFPCQPFS AG Sbjct: 166 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 207 >gi|218551294|ref|YP_002385086.1| DNA cytosine methylase [Escherichia fergusonii ATCC 35469] gi|218358836|emb|CAQ91493.1| DNA modification methylase [Escherichia fergusonii ATCC 35469] Length = 485 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 108 FRFIDLFAGIGGIR----KGFEAIGGQCVFTSEWNKEAVRTYKANWYNDESSHTFNHDIR 163 Query: 50 --TLIFGDIAKIKT------QDIPDHDVLLAGFPCQPFSQAG 83 TL D K + IPDHDVLLAGFPCQPFS AG Sbjct: 164 EVTLSADDTVSEKQAYAHIQRHIPDHDVLLAGFPCQPFSLAG 205 >gi|157368818|ref|YP_001476807.1| DNA cytosine methylase [Serratia proteamaculans 568] gi|157320582|gb|ABV39679.1| DNA-cytosine methyltransferase [Serratia proteamaculans 568] Length = 491 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIF-GDIA 57 + DLF GIGGIR E+ +C F+SE N +V+TY+AN+ P F DI Sbjct: 112 FRFIDLFAGIGGIRKGFEEIGG----QCVFTSEWNKEAVRTYKANWYCDPAHHKFNSDIR 167 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 +I ++IPDHDVLLAGFPCQPFS AG Sbjct: 168 EITLSENDDISDQEAYKNIDKEIPDHDVLLAGFPCQPFSLAG 209 >gi|133756232|ref|YP_001096382.1| DNA cytosine methylase [Escherichia coli] gi|110084067|gb|ABG49221.1| hypothetical protein [Escherichia coli] Length = 566 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 185 FRFIDLFAGIGGIR----KGFETIGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 240 Query: 50 TLIFGDIAKIKTQD--------IPDHDVLLAGFPCQPFSQAG 83 + D ++ D +PDHDVLLAGFPCQPFS AG Sbjct: 241 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 282 >gi|313158099|gb|EFR57504.1| putative DNA (cytosine-5-)-methyltransferase [Alistipes sp. HGB5] Length = 431 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/80 (52%), Positives = 52/80 (65%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF G+GG RL ++ H C FSSE N Y+ +TY ANF + FGDI K + ++ I Sbjct: 114 DLFAGMGGFRLAMQ----HYGGRCVFSSEWNKYAQQTYLANF-GEVPFGDITKDEIKEYI 168 Query: 65 PD-HDVLLAGFPCQPFSQAG 83 PD D+L AGFPCQPFS AG Sbjct: 169 PDGFDILCAGFPCQPFSIAG 188 >gi|303328045|ref|ZP_07358484.1| modification methylase MspI [Desulfovibrio sp. 3_1_syn3] gi|302861871|gb|EFL84806.1| modification methylase MspI [Desulfovibrio sp. 3_1_syn3] Length = 417 Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 37/83 (44%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M DLF G+GG L L + +C F+SEI+ Y+ NF + GDI K+ Sbjct: 6 MKTFIDLFAGLGGFHLGLSRA----GYQCVFASEIDGDLASLYERNFGLRPV-GDIRKVD 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +P HDVL AGFPCQPFS AG Sbjct: 61 VNHVPKHDVLCAGFPCQPFSSAG 83 >gi|283785730|ref|YP_003365595.1| DNA-cytosine methyltransferase [Citrobacter rodentium ICC168] gi|282949184|emb|CBG88792.1| DNA-cytosine methyltransferase [Citrobacter rodentium ICC168] Length = 477 Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P + F DI Sbjct: 92 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYYCDPASHRFNEDIR 147 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q +P HDVLLAGFPCQPFS AG Sbjct: 148 DITLSHREGISDRQAAEHIRQHVPQHDVLLAGFPCQPFSLAG 189 >gi|37524351|ref|NP_927695.1| DNA cytosine methylase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36783775|emb|CAE12633.1| DNA-cytosine methyltransferase [Photorhabdus luminescens subsp. laumondii TTO1] Length = 478 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 24/101 (23%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIF-GDIAK 58 + DLF GIGGIR E+ +C F+SE N +V+TY+AN+ P + F DI + Sbjct: 97 RFIDLFAGIGGIRKGFEEI----GGQCVFTSEWNKDAVRTYKANWYCDPESHKFNSDIRE 152 Query: 59 IK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I ++IPDHDVLLAGFPCQPFS AG Sbjct: 153 ITLSENSKIDEKEAYKNIDKEIPDHDVLLAGFPCQPFSLAG 193 >gi|292670064|ref|ZP_06603490.1| modification methylase EcoRII [Selenomonas noxia ATCC 43541] gi|292648252|gb|EFF66224.1| modification methylase EcoRII [Selenomonas noxia ATCC 43541] Length = 377 Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 2/79 (2%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDI 64 DLF GIGGIR + F + F SE + ++ KTY+AN+ ++ I GDI KI ++I Sbjct: 35 DLFAGIGGIRKGFDNAFGDA-IRTVFVSEWDEHAQKTYRANYNDSFEIAGDITKIAAEEI 93 Query: 65 PDHDVLLAGFPCQPFSQAG 83 D+ LAGFPCQ FS AG Sbjct: 94 APFDICLAGFPCQAFSMAG 112 >gi|296103580|ref|YP_003613726.1| DNA cytosine methylase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058039|gb|ADF62777.1| DNA cytosine methylase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 471 Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIF-GDIA 57 + DLF GIGGIR F +C F+SE N ++V+TY+AN+ P+ F DI Sbjct: 86 FRFIDLFAGIGGIR----HGFEAIGGQCVFTSEWNKHAVRTYKANWYCDPDAHQFNADIR 141 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 + Q+IP HDVLLAGFPCQPFS AG Sbjct: 142 DVTLSHKSGVSDEEAAEHIRQNIPAHDVLLAGFPCQPFSLAG 183 >gi|300951590|ref|ZP_07165422.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 116-1] gi|300449174|gb|EFK12794.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 116-1] Length = 478 Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 93 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 148 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I + IP+HDVLLAGFPCQPFS AG Sbjct: 149 DITLSHKEGVSDEAAAEHIRKHIPEHDVLLAGFPCQPFSLAG 190 >gi|300956520|ref|ZP_07168803.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 175-1] gi|300316661|gb|EFJ66445.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 175-1] Length = 477 Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 92 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I + IP+HDVLLAGFPCQPFS AG Sbjct: 148 DITLSHKEGVSDEAAAEHIRKHIPEHDVLLAGFPCQPFSLAG 189 >gi|291463698|pdb|3LX6|A Chain A, Structure Of Probable Cytosine-Specific Methyltransferase From Shigella Flexneri gi|291463699|pdb|3LX6|B Chain B, Structure Of Probable Cytosine-Specific Methyltransferase From Shigella Flexneri Length = 410 Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 27 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 82 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 83 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 124 >gi|317009733|gb|ADU80313.1| type II DNA modification enzyme [Helicobacter pylori India7] Length = 318 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD DVL++GFPCQ FS G Sbjct: 59 PNDLPDFDVLISGFPCQAFSING 81 >gi|53714966|ref|YP_100958.1| C-5 cytosine-specific DNA-methylase [Bacteroides fragilis YCH46] gi|52217831|dbj|BAD50424.1| C-5 cytosine-specific DNA-methylase [Bacteroides fragilis YCH46] Length = 431 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 43/80 (53%), Positives = 52/80 (65%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF G+GG RL ++ + +C FSSE N Y+ KTY ANF + FGDI K T+ I Sbjct: 117 DLFAGMGGFRLAMQA----QGGKCVFSSEWNKYAQKTYLANF-GEMPFGDITKEMTKSYI 171 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P + DVL AGFPCQPFS AG Sbjct: 172 PRNFDVLCAGFPCQPFSIAG 191 >gi|188527903|ref|YP_001910590.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Shi470] gi|188144143|gb|ACD48560.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Shi470] gi|308063905|gb|ADO05792.1| type II DNA modification enzyme [Helicobacter pylori Sat464] Length = 320 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ ++C +EIN +++TY+ F +T FGD+ +IK Sbjct: 5 ILTFMDFCSGIGGGRLGLEQC----RLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIK 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 61 PNDLPDFDALISGFPCQAFSING 83 >gi|170019707|ref|YP_001724661.1| DNA cytosine methylase [Escherichia coli ATCC 8739] gi|169754635|gb|ACA77334.1| DNA-cytosine methyltransferase [Escherichia coli ATCC 8739] gi|323940380|gb|EGB36571.1| DNA-cytosine methyltransferase [Escherichia coli E482] gi|332093084|gb|EGI98148.1| DNA-cytosine methyltransferase [Shigella boydii 5216-82] Length = 472 Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I + IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRKHIPEHDVLLAGFPCQPFSLAG 184 >gi|324018843|gb|EGB88062.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 117-3] Length = 472 Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I + IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVNDEAAAEHIRKHIPEHDVLLAGFPCQPFSLAG 184 >gi|331084584|ref|ZP_08333682.1| hypothetical protein HMPREF0992_02606 [Lachnospiraceae bacterium 6_1_63FAA] gi|330400654|gb|EGG80261.1| hypothetical protein HMPREF0992_02606 [Lachnospiraceae bacterium 6_1_63FAA] Length = 324 Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 3/83 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K F G+GGI E T + V +++EI+ Y +T++ NF + DI ++K Sbjct: 1 MFKCASFFAGVGGIDYGFESTGVFKTV---YANEIDSYPAQTFELNFDVKVDVRDIHEVK 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +++IPD D++LAGFPCQ FS AG Sbjct: 58 SEEIPDFDIMLAGFPCQAFSIAG 80 >gi|209527672|ref|ZP_03276170.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209491900|gb|EDZ92257.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 429 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 50/84 (59%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF GIGG+RL EQ +C SSEI+ + + YQANF T GDI I Sbjct: 4 VKFIDLFAGIGGLRLGFEQALESLGCIPDCLLSSEIDGDARQVYQANFSETPQ-GDIQTI 62 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +P H VLLAGFPCQ FS AG Sbjct: 63 PS--LPPHHVLLAGFPCQSFSYAG 84 >gi|168234623|ref|ZP_02659681.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736513|ref|YP_002117411.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712015|gb|ACF91236.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291717|gb|EDY31067.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 474 Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 96 FRFIDLFAGIGGIR----KGFEAIGGQCVFTSEWNKEAVRTYKANWYNDEDAHTFNLDIR 151 Query: 50 -TLIFGD--IAKIKT-----QDIPDHDVLLAGFPCQPFSQAG 83 + G+ I++ K Q IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSGEEGISEEKAYAHIDQHIPDHDVLLAGFPCQPFSLAG 193 >gi|161617789|ref|YP_001591754.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161367153|gb|ABX70921.1| hypothetical protein SPAB_05653 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 474 Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 96 FRFIDLFAGIGGIR----KGFEAIGGQCVFTSEWNKEAVRTYKANWYNDEDAHTFNLDIR 151 Query: 50 -TLIFGD--IAKIKT-----QDIPDHDVLLAGFPCQPFSQAG 83 + G+ I++ K Q IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSGEEGISEEKAYAHIDQHIPDHDVLLAGFPCQPFSLAG 193 >gi|323650448|gb|ADX97301.1| M.Fnu4HI [Fusobacterium nucleatum] Length = 351 Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 3/83 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K+ LF G+GGI L EQT + + V + +E + + +T++ NF N L DI ++ Sbjct: 1 MYKVASLFAGVGGIDLGFEQTGHFKTV---WXNEYDDKARETFRCNFSNKLNENDIREVD 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 Q+IPD D+LL+GFPC FS AG Sbjct: 58 VQEIPDIDILLSGFPCTSFSVAG 80 >gi|161505003|ref|YP_001572115.1| DNA cytosine methylase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866350|gb|ABX22973.1| hypothetical protein SARI_03133 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 474 Score = 70.9 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 96 FRFIDLFAGIGGIR----KGFEAIGGQCVFTSEWNKEAVRTYKANWYNDEDAHTFNLDIR 151 Query: 50 -TLIFGD--IAKIKT-----QDIPDHDVLLAGFPCQPFSQAG 83 + G+ I++ K Q IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSGEEGISEEKAYAHIDQHIPDHDVLLAGFPCQPFSLAG 193 >gi|48093754|gb|AAT40239.1| Eco128I DNA methylase [Escherichia coli] Length = 332 Score = 70.9 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 15 FRFIDLFAGIGGIR----KGFETIGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 70 Query: 50 TLIFGDIAKIKTQD--------IPDHDVLLAGFPCQPFSQAG 83 + D ++ D +PDHDVLLAGFPCQPFS AG Sbjct: 71 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 112 >gi|166366204|ref|YP_001658477.1| DNA cytosine methylase [Microcystis aeruginosa NIES-843] gi|166088577|dbj|BAG03285.1| DNA cytosine methylase [Microcystis aeruginosa NIES-843] Length = 346 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L D + GIGG RL LEQ +C FS+E NP VKTY NF ++ D+ + Sbjct: 18 LTFADFYAGIGGFRLGLEQI----GWQCVFSNENNPDCVKTYNHNFHESIKPQDVEALIP 73 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +PD +V GFPCQPFS+AG Sbjct: 74 SLLPDFEVFCGGFPCQPFSRAG 95 >gi|159029905|emb|CAO90959.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 346 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L D + GIGG RL LEQ +C FS+E NP VKTY NF ++ D+ + Sbjct: 18 LTFADFYAGIGGFRLGLEQI----GWQCVFSNENNPDCVKTYNHNFHESIKPQDVEALIP 73 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +PD +V GFPCQPFS+AG Sbjct: 74 SLLPDFEVFCGGFPCQPFSRAG 95 >gi|294646710|ref|ZP_06724334.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CC 2a] gi|294807186|ref|ZP_06766001.1| DNA (cytosine-5-)-methyltransferase [Bacteroides xylanisolvens SD CC 1b] gi|292637950|gb|EFF56344.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CC 2a] gi|294445609|gb|EFG14261.1| DNA (cytosine-5-)-methyltransferase [Bacteroides xylanisolvens SD CC 1b] Length = 445 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 42/80 (52%), Positives = 52/80 (65%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF G+GG RL ++ + +C FSSE N Y+ KTY ANF + FGDI K T+ I Sbjct: 117 DLFAGMGGFRLAMQA----QGGKCVFSSEWNKYAQKTYLANF-GEMPFGDITKEVTKSYI 171 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P + D+L AGFPCQPFS AG Sbjct: 172 PQYFDILCAGFPCQPFSIAG 191 >gi|329298618|ref|ZP_08255954.1| DNA cytosine methylase [Plautia stali symbiont] Length = 465 Score = 70.9 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 43/101 (42%), Positives = 51/101 (50%), Gaps = 23/101 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + DLF GIGGIR EQ +C F+SE N +V+TY+AN P F + Sbjct: 91 FQFIDLFAGIGGIRRGFEQIGG----QCVFTSEWNKEAVRTYKANHYSDPAQHQFNSDIR 146 Query: 59 IKTQ----------------DIPDHDVLLAGFPCQPFSQAG 83 + TQ IPDH VLLAGFPCQPFS AG Sbjct: 147 LITQPAGLPDEQAIYQHIDQTIPDHQVLLAGFPCQPFSLAG 187 >gi|284050345|ref|ZP_06380555.1| DNA (cytosine-5-)-methyltransferase [Arthrospira platensis str. Paraca] Length = 429 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 41/84 (48%), Positives = 51/84 (60%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF GIGG+RL EQ + +C SSEI+ + + YQANF T GDI I Sbjct: 4 VKFIDLFAGIGGLRLGFEQAVDSFGCIPDCLLSSEIDRDARQVYQANFSETPQ-GDIKTI 62 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +P H +LLAGFPCQ FS AG Sbjct: 63 SS--LPPHHILLAGFPCQSFSYAG 84 >gi|237713924|ref|ZP_04544405.1| C-5 cytosine-specific DNA-methylase [Bacteroides sp. D1] gi|262409168|ref|ZP_06085712.1| C-5 cytosine-specific DNA-methylase [Bacteroides sp. 2_1_22] gi|229446080|gb|EEO51871.1| C-5 cytosine-specific DNA-methylase [Bacteroides sp. D1] gi|262352915|gb|EEZ02011.1| C-5 cytosine-specific DNA-methylase [Bacteroides sp. 2_1_22] Length = 361 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 42/80 (52%), Positives = 52/80 (65%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF G+GG RL ++ + +C FSSE N Y+ KTY ANF + FGDI K T+ I Sbjct: 33 DLFAGMGGFRLAMQA----QGGKCVFSSEWNKYAQKTYLANF-GEMPFGDITKEVTKSYI 87 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P + D+L AGFPCQPFS AG Sbjct: 88 PQYFDILCAGFPCQPFSIAG 107 >gi|157147667|ref|YP_001454986.1| DNA cytosine methylase [Citrobacter koseri ATCC BAA-895] gi|157084872|gb|ABV14550.1| hypothetical protein CKO_03470 [Citrobacter koseri ATCC BAA-895] Length = 474 Score = 70.9 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 96 FRFIDLFAGIGGIR----KGFEAIGGQCVFTSEWNKEAVRTYKANWYNDEDAHTFNLDIR 151 Query: 50 -TLIFGD--IAKIKT-----QDIPDHDVLLAGFPCQPFSQAG 83 + G+ I++ K Q IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSGEEGISEEKAYAHIDQHIPDHDVLLAGFPCQPFSLAG 193 >gi|291569071|dbj|BAI91343.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39] Length = 429 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 41/84 (48%), Positives = 51/84 (60%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF GIGG+RL EQ + +C SSEI+ + + YQANF T GDI I Sbjct: 4 VKFIDLFAGIGGLRLGFEQAVDSFGCIPDCLLSSEIDRDARQVYQANFSETPQ-GDIKTI 62 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +P H +LLAGFPCQ FS AG Sbjct: 63 SS--LPPHHILLAGFPCQSFSYAG 84 >gi|254410261|ref|ZP_05024041.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196183297|gb|EDX78281.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 384 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 40/82 (48%), Positives = 48/82 (58%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGG R+ EQT +C +S EI+P + Y NF + GDI +I Sbjct: 4 IKFIDLFAGIGGFRIAFEQT----GYKCVYSCEIDPKCQEVYFNNFLDKPA-GDIREIDI 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPD DVL AGFPCQPFS G Sbjct: 59 NSIPDFDVLTAGFPCQPFSICG 80 >gi|313677762|ref|YP_004055758.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] gi|312944460|gb|ADR23650.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] Length = 378 Score = 70.9 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 7/86 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 LK FCG GG+ L L FN+ N E ++++ + Y+ + Y +NF + I Sbjct: 10 LKAASFFCGCGGMDLGLVGNFNYLNGNYSSLPFEIVYANDFDTYATEIYNSNFEHKCITK 69 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFS 80 DI + +IP+HD+LL GFPCQ FS Sbjct: 70 DIKDVSMSEIPEHDILLGGFPCQSFS 95 >gi|218699478|ref|YP_002407107.1| DNA cytosine methylase [Escherichia coli IAI39] gi|218369464|emb|CAR17229.1| DNA cytosine methylase [Escherichia coli IAI39] Length = 472 Score = 70.9 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + DLF GIGGIR + F +C F+ E N ++V+TY+AN P T F + + Sbjct: 87 FRFIDLFAGIGGIR----RGFESIGGQCVFTREWNKHAVRTYKANHYCDPATHHFNEDTR 142 Query: 59 IKT-----------------QDIPDHDVLLAGFPCQPFSQAG 83 T Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|172039424|ref|YP_001805925.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] gi|171700878|gb|ACB53859.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] Length = 729 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 41/82 (50%), Positives = 48/82 (58%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF GIGG RL E+ H C +S EIN + + Y NF L DI KI Sbjct: 6 LKFIDLFAGIGGFRLAFEKAGYH----CVYSCEINDHCRQVYYDNF-GELPDQDITKIIP 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++IPD D+L AGFPCQPFS G Sbjct: 61 KNIPDFDILTAGFPCQPFSICG 82 >gi|319779706|ref|YP_004130619.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9] gi|317109730|gb|ADU92476.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9] Length = 329 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L DLF GIGG R+ L+ +C FSSE + ++ +TY NF N + DI KI Sbjct: 12 LTFIDLFAGIGGFRVALQSL----GAKCVFSSEWDKFAKETYWLNF-NEIAHDDITKIDE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP+HD+L AGFPCQ FS +G Sbjct: 67 CTIPNHDILCAGFPCQAFSISG 88 >gi|322616984|gb|EFY13892.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618223|gb|EFY15115.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625894|gb|EFY22713.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626346|gb|EFY23156.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632761|gb|EFY29506.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639103|gb|EFY35796.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640419|gb|EFY37075.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647220|gb|EFY43719.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648528|gb|EFY44979.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655540|gb|EFY51848.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660318|gb|EFY56556.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662999|gb|EFY59206.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668184|gb|EFY64343.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674057|gb|EFY70151.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675591|gb|EFY71665.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682998|gb|EFY79014.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686692|gb|EFY82670.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195420|gb|EFZ80600.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198052|gb|EFZ83169.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204476|gb|EFZ89482.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207566|gb|EFZ92514.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210995|gb|EFZ95855.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217551|gb|EGA02270.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323226697|gb|EGA10894.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231573|gb|EGA15686.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236016|gb|EGA20095.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240586|gb|EGA24629.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245478|gb|EGA29478.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247596|gb|EGA31547.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254424|gb|EGA38240.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257764|gb|EGA41444.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262129|gb|EGA45692.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266252|gb|EGA49742.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270729|gb|EGA54168.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 476 Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|200390041|ref|ZP_03216652.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602486|gb|EDZ01032.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 476 Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|168239231|ref|ZP_02664289.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734985|ref|YP_002115026.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|204931362|ref|ZP_03222061.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|194710487|gb|ACF89708.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288080|gb|EDY27467.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204319845|gb|EDZ05054.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 476 Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|198242597|ref|YP_002215094.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937113|gb|ACH74446.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326622842|gb|EGE29187.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 476 Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|167552776|ref|ZP_02346527.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322616|gb|EDZ10455.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 476 Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|161613440|ref|YP_001587405.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|205352316|ref|YP_002226117.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856496|ref|YP_002243147.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|161362804|gb|ABX66572.1| hypothetical protein SPAB_01156 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|205272097|emb|CAR36949.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206708299|emb|CAR32602.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326627365|gb|EGE33708.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 476 Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|159795737|pdb|2Z6A|A Chain A, S-Adenosyl-L-Methionine-Dependent Methyl Transfer: Observable Precatalytic Intermediates During Dna Cytosine Methylation Length = 327 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKPE-GDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFP Q FS +G Sbjct: 67 KTIPDHDILCAGFPAQAFSISG 88 >gi|331643338|ref|ZP_08344469.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli H736] gi|331036809|gb|EGI09033.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli H736] Length = 491 Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 110 FRFIDLFAGIGGIR----KGFEAIGGQCVFTSEWNKDAVRTYKANWFNDEQVHKFNLDIR 165 Query: 50 TLIFGDIAKIKTQD--------IPDHDVLLAGFPCQPFSQAG 83 + D + D +PDHDVLLAGFPCQPFS AG Sbjct: 166 EVTLSDKTDVLETDAYAYIDEHVPDHDVLLAGFPCQPFSLAG 207 >gi|323960520|gb|EGB56149.1| DNA-cytosine methyltransferase [Escherichia coli H489] Length = 477 Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 96 FRFIDLFAGIGGIR----KGFEAIGGQCVFTSEWNKDAVRTYKANWFNDEQVHKFNLDIR 151 Query: 50 TLIFGDIAKIKTQD--------IPDHDVLLAGFPCQPFSQAG 83 + D + D +PDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDKTDVLETDAYAYIDEHVPDHDVLLAGFPCQPFSLAG 193 >gi|307139342|ref|ZP_07498698.1| DNA cytosine methylase [Escherichia coli H736] Length = 477 Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 96 FRFIDLFAGIGGIR----KGFEAIGGQCVFTSEWNKDAVRTYKANWFNDEQVHKFNLDIR 151 Query: 50 TLIFGDIAKIKTQD--------IPDHDVLLAGFPCQPFSQAG 83 + D + D +PDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDKTDVLETDAYAYIDEHVPDHDVLLAGFPCQPFSLAG 193 >gi|218701133|ref|YP_002408762.1| DNA cytosine methylase [Escherichia coli IAI39] gi|218371119|emb|CAR18947.1| Modification methylase EcoRII (M.EcoRII) (Cytosine-specific methyltransferase EcoRII) [Escherichia coli IAI39] Length = 491 Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLF GIGGIR + F +C F+SE N +V+TY+AN+ N Sbjct: 110 FRFIDLFAGIGGIR----KGFEAIGGQCVFTSEWNKDAVRTYKANWFNDEQVHKFNLDIR 165 Query: 50 TLIFGDIAKIKTQD--------IPDHDVLLAGFPCQPFSQAG 83 + D + D +PDHDVLLAGFPCQPFS AG Sbjct: 166 EVTLSDKTDVLETDAYAYIDEHVPDHDVLLAGFPCQPFSLAG 207 >gi|168259722|ref|ZP_02681695.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205351069|gb|EDZ37700.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 476 Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|168462467|ref|ZP_02696398.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194443436|ref|YP_002041256.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|238912436|ref|ZP_04656273.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194402099|gb|ACF62321.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195634356|gb|EDX52708.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 476 Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|168234164|ref|ZP_02659222.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168821682|ref|ZP_02833682.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194470868|ref|ZP_03076852.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197263635|ref|ZP_03163709.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|194457232|gb|EDX46071.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197241890|gb|EDY24510.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205331847|gb|EDZ18611.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205341769|gb|EDZ28533.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320085391|emb|CBY95172.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 476 Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|56413096|ref|YP_150171.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362022|ref|YP_002141659.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127353|gb|AAV76859.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093499|emb|CAR58960.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 476 Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|239627884|ref|ZP_04670915.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518030|gb|EEQ57896.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 325 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLFCGIGG R LE C FS + N + TYQ+N+ + + GDI KI+ +DIP Sbjct: 8 DLFCGIGGFRQALESV----GGTCVFSCDKNKNARLTYQSNYGD-MPDGDITKIEAKDIP 62 Query: 66 DHDVLLAGFPCQPFSQAG 83 ++L AGFPCQPFS AG Sbjct: 63 PFNILCAGFPCQPFSIAG 80 >gi|197251440|ref|YP_002146032.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197215143|gb|ACH52540.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 476 Score = 70.5 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|16765328|ref|NP_460943.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167993566|ref|ZP_02574660.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16420526|gb|AAL20902.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205328427|gb|EDZ15191.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261247157|emb|CBG24980.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993981|gb|ACY88866.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158505|emb|CBW18015.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912981|dbj|BAJ36955.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224636|gb|EFX49699.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130270|gb|ADX17700.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988880|gb|AEF07863.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 476 Score = 70.5 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|16760934|ref|NP_456551.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141374|ref|NP_804716.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213424982|ref|ZP_03357732.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|289829483|ref|ZP_06547095.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25286126|pir||AH0754 site-specific DNA-methyltransferase (cytosine-specific) (EC 2.1.1.73) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503231|emb|CAD05739.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137001|gb|AAO68565.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 476 Score = 70.5 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|168244842|ref|ZP_02669774.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194449372|ref|YP_002046042.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194407676|gb|ACF67895.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205336375|gb|EDZ23139.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 476 Score = 70.5 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|224583511|ref|YP_002637309.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468038|gb|ACN45868.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 476 Score = 70.5 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|332673919|gb|AEE70736.1| C-5 cytosine-specific DNA methylase [Helicobacter pylori 83] Length = 319 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTYNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81 >gi|146312197|ref|YP_001177271.1| DNA cytosine methylase [Enterobacter sp. 638] gi|145319073|gb|ABP61220.1| DNA-cytosine methyltransferase [Enterobacter sp. 638] Length = 471 Score = 70.5 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + DLF GIGGIR F +C F+SE N ++V+TY+AN+ P+T F + + Sbjct: 86 FRFVDLFAGIGGIR----HGFEAIGGQCVFTSEWNKHAVRTYKANWYCDPHTHQFNEDIR 141 Query: 59 IKT-----------------QDIPDHDVLLAGFPCQPFSQAG 83 T + IP HDVLLAGFPCQPFS AG Sbjct: 142 DVTLSHKSGVTDAEAADHIRRTIPAHDVLLAGFPCQPFSLAG 183 >gi|62180565|ref|YP_216982.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128198|gb|AAX65901.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715041|gb|EFZ06612.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 476 Score = 70.1 bits (170), Expect = 8e-11, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|315587009|gb|ADU41390.1| C-5 cytosine-specific DNA methylase [Helicobacter pylori 35A] Length = 313 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 37/77 (48%), Positives = 51/77 (66%), Gaps = 5/77 (6%) Query: 8 FC-GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 FC GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+PD Sbjct: 3 FCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLPD 58 Query: 67 HDVLLAGFPCQPFSQAG 83 DVL++GFPCQ FS G Sbjct: 59 FDVLISGFPCQAFSING 75 >gi|159025987|emb|CAO87894.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 329 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + D + GIGG RL LEQ +C FS+E NP VKTY NF ++ D+ + Sbjct: 1 MTFADFYAGIGGFRLGLEQI----GWQCVFSNENNPDCVKTYNHNFHESIKPQDVEALIP 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +PD +V GFPCQPFS+AG Sbjct: 57 SLLPDFEVFCGGFPCQPFSRAG 78 >gi|262043463|ref|ZP_06016586.1| DNA (cytosine-5-)-methyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039205|gb|EEW40353.1| DNA (cytosine-5-)-methyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 477 Score = 70.1 bits (170), Expect = 9e-11, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 92 FRFIDLFAGIGGIRSGFEAIGG----QCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 147 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I + IP HDVLLAGFPCQPFS AG Sbjct: 148 DITLSQRSDVSDEEAARHIRESIPQHDVLLAGFPCQPFSLAG 189 >gi|238895488|ref|YP_002920223.1| DNA cytosine methylase [Klebsiella pneumoniae NTUH-K2044] gi|330000908|ref|ZP_08303852.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. MS 92-3] gi|238547805|dbj|BAH64156.1| DNA cytosine methylase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328537840|gb|EGF64032.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. MS 92-3] Length = 477 Score = 70.1 bits (170), Expect = 9e-11, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 92 FRFIDLFAGIGGIRSGFEAIGG----QCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 147 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I + IP HDVLLAGFPCQPFS AG Sbjct: 148 DITLSQRSDVSDEEAARHIRESIPQHDVLLAGFPCQPFSLAG 189 >gi|152970972|ref|YP_001336081.1| DNA cytosine methylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955821|gb|ABR77851.1| DNA cytosine methylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 477 Score = 70.1 bits (170), Expect = 9e-11, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 92 FRFIDLFAGIGGIRSGFEAIGG----QCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 147 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I + IP HDVLLAGFPCQPFS AG Sbjct: 148 DITLSQRSDVSDEEAARHIRESIPQHDVLLAGFPCQPFSLAG 189 >gi|314055098|ref|YP_004063436.1| cytosine-specific methyltransferase [Ostreococcus tauri virus 2] gi|313574989|emb|CBI70002.1| cytosine-specific methyltransferase [Ostreococcus tauri virus 2] Length = 315 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + DLF G G LE T + EC F+++ + S + Y N +T + GD+ I + Sbjct: 4 RFIDLFAGTGAFTYALENTGKY---ECVFANDFDKSSKEIYTNNHDSTFVLGDLNDILVE 60 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIP+HD+L GFPCQPFS AG Sbjct: 61 DIPEHDLLCGGFPCQPFSIAG 81 >gi|310767946|gb|ADP12896.1| DNA cytosine methylase [Erwinia sp. Ejp617] Length = 467 Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ DI Sbjct: 93 FRFIDLFAGIGGIRSGFEAIGG----QCVFTSEWNKHAVRTYKANWYCDERQHRFNQDIR 148 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 + Q +PDHDVLLAGFPCQPFS AG Sbjct: 149 DVTLSGKPEITDRQAYQHIQQQVPDHDVLLAGFPCQPFSLAG 190 >gi|292488627|ref|YP_003531511.1| DNA cytosine methylase [Erwinia amylovora CFBP1430] gi|292899788|ref|YP_003539157.1| modification methylase EcoRII [Erwinia amylovora ATCC 49946] gi|291199636|emb|CBJ46755.1| modification methylase EcoRII [Erwinia amylovora ATCC 49946] gi|291554058|emb|CBA21160.1| DNA cytosine methylase [Erwinia amylovora CFBP1430] gi|312172770|emb|CBX81026.1| DNA cytosine methylase [Erwinia amylovora ATCC BAA-2158] Length = 469 Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ DI Sbjct: 95 FRFIDLFAGIGGIRSGFEAIGG----QCVFTSEWNKHAVRTYKANWYCDERQHRFNQDIR 150 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 + Q +PDHDVLLAGFPCQPFS AG Sbjct: 151 DVTLSGKPEISDRQAYQHIQQQVPDHDVLLAGFPCQPFSLAG 192 >gi|317480905|ref|ZP_07939986.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36] gi|316902990|gb|EFV24863.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36] Length = 441 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/83 (46%), Positives = 49/83 (59%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF G+GG L LE+ EC F+SEI Y+ N + GDI ++ Sbjct: 4 LKFIDLFAGLGGFHLALEKL----GCECVFASEIQTELRTLYERNH-GIICHGDINEVDI 58 Query: 62 Q-DIPDHDVLLAGFPCQPFSQAG 83 + DIP+HD+L GFPCQPFSQAG Sbjct: 59 EKDIPEHDILCGGFPCQPFSQAG 81 >gi|317048624|ref|YP_004116272.1| DNA-cytosine methyltransferase [Pantoea sp. At-9b] gi|316950241|gb|ADU69716.1| DNA-cytosine methyltransferase [Pantoea sp. At-9b] Length = 467 Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 43/101 (42%), Positives = 50/101 (49%), Gaps = 23/101 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + DLF GIGGIR EQ +C F+SE N +V+TY+AN P F + Sbjct: 93 FQFVDLFAGIGGIRRGFEQIGG----QCVFTSEWNKEAVRTYKANHYCDPQQHRFNSDIR 148 Query: 59 IKTQ----------------DIPDHDVLLAGFPCQPFSQAG 83 TQ IPDH VLLAGFPCQPFS AG Sbjct: 149 QVTQPAGLHDEQAIYQHIDRTIPDHQVLLAGFPCQPFSLAG 189 >gi|317177871|dbj|BAJ55660.1| Type II DNA modification enzyme [Helicobacter pylori F16] Length = 319 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81 >gi|161502886|ref|YP_001569998.1| DNA cytosine methylase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864233|gb|ABX20856.1| hypothetical protein SARI_00944 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 476 Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLEHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVGDDEAAEHIRQYIPQHDVLLAGFPCQPFSLAG 188 >gi|260886138|ref|ZP_05736578.2| modification methylase EcoRII [Prevotella tannerae ATCC 51259] gi|260850757|gb|EEX70626.1| modification methylase EcoRII [Prevotella tannerae ATCC 51259] Length = 427 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/83 (49%), Positives = 52/83 (62%), Gaps = 7/83 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF G+GG RL L++ C +SSE P + +TY AN+ + FGDI K T+ Sbjct: 106 KFIDLFAGVGGFRLALQRI----GGRCVYSSEFEPNAQQTYLANY-GEMPFGDITKESTK 160 Query: 63 D-IPDH-DVLLAGFPCQPFSQAG 83 IPD+ DVL AGFPCQPFS +G Sbjct: 161 SYIPDNFDVLCAGFPCQPFSISG 183 >gi|317012898|gb|ADU83506.1| type II DNA modification enzyme [Helicobacter pylori Lithuania75] Length = 318 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81 >gi|317014507|gb|ADU81943.1| type II DNA modification (methyltransferase) [Helicobacter pylori Gambia94/24] Length = 318 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLERC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD DVL++GFPCQ FS G Sbjct: 59 PNDLPDFDVLVSGFPCQAFSING 81 >gi|261838450|gb|ACX98216.1| type II m5C methylase [Helicobacter pylori 51] Length = 318 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81 >gi|208435018|ref|YP_002266684.1| type II DNA modification enzyme [Helicobacter pylori G27] gi|208432947|gb|ACI27818.1| type II DNA modification enzyme [Helicobacter pylori G27] Length = 318 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALVSGFPCQAFSING 81 >gi|157412142|ref|YP_001481483.1| DNA cytosine methylase [Escherichia coli APEC O1] gi|99867167|gb|ABF67812.1| cytosine methylase [Escherichia coli APEC O1] Length = 489 Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 44/98 (44%), Positives = 52/98 (53%), Gaps = 24/98 (24%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIF-GDIAKIKT 61 DLF GIGG+R F+ +C F+SE N YS +TY+AN+ N F DI I Sbjct: 110 DLFAGIGGLR----SGFDAIGGKCLFTSEWNTYSSRTYRANWYCDENEHRFNSDIRDITL 165 Query: 62 QD----------------IPDHDVLLAGFPCQPFSQAG 83 + IPDHDVLLAGFPCQPFS AG Sbjct: 166 SNRPEVTDDEAYKFIDASIPDHDVLLAGFPCQPFSIAG 203 >gi|322511205|gb|ADX06517.1| putative C-5 cytosine specific DNA methyltransferase [Organic Lake phycodnavirus] Length = 384 Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ DLF G G L + T V F +++ +S Y NF + L D+ ++K Sbjct: 72 LKMIDLFAGTGAFTLAFQLT---NAVNVVFGNDMVEHSKNIYDNNFNHKLTLKDLNEVKN 128 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIP HD+L GFPCQPFS AG Sbjct: 129 EDIPSHDILTGGFPCQPFSIAG 150 >gi|307637790|gb|ADN80240.1| DNA-cytosine methyl transferase [Helicobacter pylori 908] gi|325996388|gb|ADZ51793.1| DNA-cytosine methyltransferase [Helicobacter pylori 2018] gi|325997976|gb|ADZ50184.1| Type II DNA modification enzyme/ methyltransferase [Helicobacter pylori 2017] Length = 318 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLERC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD DVL++GFPCQ FS G Sbjct: 59 PNDLPDFDVLVSGFPCQAFSING 81 >gi|218247578|ref|YP_002372949.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|218168056|gb|ACK66793.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] Length = 727 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/84 (47%), Positives = 46/84 (54%), Gaps = 11/84 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAKI 59 K DLF GIGG RL EQ +C +S EIN Y K Y NF P+ D+ KI Sbjct: 7 KFIDLFAGIGGFRLAFEQA----QYQCVYSCEINEYCQKVYYNNFDECPD----NDVTKI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +P+ DVL AGFPCQPFS G Sbjct: 59 NPHTLPNFDVLTAGFPCQPFSICG 82 >gi|213650730|ref|ZP_03380783.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 405 Score = 69.3 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 20 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 75 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 76 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 117 >gi|257061088|ref|YP_003138976.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|256591254|gb|ACV02141.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 331 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/82 (47%), Positives = 45/82 (54%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL EQ +C +S EIN Y K Y NF + D+ +I Sbjct: 6 FKFIDLFAGIGGFRLAFEQA----QYQCVYSCEINEYCQKVYYNNF-DECPDNDVTQINP 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +PD DVL AGFPCQPFS G Sbjct: 61 DTLPDFDVLTAGFPCQPFSICG 82 >gi|226807724|ref|YP_002791420.1| Dcm [Enterobacter cloacae] gi|226810038|ref|YP_002791733.1| Dcm [Enterobacter cloacae] gi|226425951|gb|ACO54044.1| Dcm [Enterobacter cloacae] gi|226426265|gb|ACO54357.1| Dcm [Enterobacter cloacae] Length = 489 Score = 69.3 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 44/98 (44%), Positives = 52/98 (53%), Gaps = 24/98 (24%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIF-GDIAKIKT 61 DLF GIGG+R F+ +C F+SE N YS +TY+AN+ N F DI I Sbjct: 110 DLFAGIGGLR----SGFDAIGGKCLFTSEWNTYSSRTYRANWYCDENEHRFNSDIRDITL 165 Query: 62 QD----------------IPDHDVLLAGFPCQPFSQAG 83 + IPDHDVLLAGFPCQPFS AG Sbjct: 166 SNRPEVTDDEAYKFIDASIPDHDVLLAGFPCQPFSIAG 203 >gi|261340425|ref|ZP_05968283.1| DNA (cytosine-5-)-methyltransferase [Enterobacter cancerogenus ATCC 35316] gi|288317516|gb|EFC56454.1| DNA (cytosine-5-)-methyltransferase [Enterobacter cancerogenus ATCC 35316] Length = 477 Score = 69.3 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIF-GDIA 57 + DLF GIGGIR F +C F+SE N ++V+TY+AN+ P+ F DI Sbjct: 92 FRFIDLFAGIGGIR----HGFEAIGGQCVFTSEWNKHAVRTYKANWYCDPDEHHFNADIR 147 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 + Q IP HDVLLAGFPCQPFS AG Sbjct: 148 DVTLSHKSGVTDEEAAHHIRQAIPAHDVLLAGFPCQPFSLAG 189 >gi|259908144|ref|YP_002648500.1| DNA cytosine methylase [Erwinia pyrifoliae Ep1/96] gi|224963766|emb|CAX55267.1| DNA-cytosine methyltransferase [Erwinia pyrifoliae Ep1/96] gi|283478063|emb|CAY73979.1| DNA cytosine methylase [Erwinia pyrifoliae DSM 12163] Length = 467 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ DI Sbjct: 93 FRFIDLFAGIGGIRSGFEAIGG----QCAFTSEWNKHAVRTYKANWYCDERQHRFNQDIR 148 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 + Q +PDHDVLLAGFPCQPFS AG Sbjct: 149 DVTLSGKPEITDRQAYQHIQQQVPDHDVLLAGFPCQPFSLAG 190 >gi|317182374|dbj|BAJ60158.1| Type II DNA modification enzyme [Helicobacter pylori F57] Length = 318 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ ++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----RLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81 >gi|261839852|gb|ACX99617.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori 52] Length = 319 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----HLKCVGHAEINHGALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81 >gi|317180853|dbj|BAJ58639.1| Type II DNA modification enzyme [Helicobacter pylori F32] Length = 312 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 5/77 (6%) Query: 8 FC-GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 FC GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+PD Sbjct: 3 FCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTYNFGDLMRINPNDLPD 58 Query: 67 HDVLLAGFPCQPFSQAG 83 D L++GFPCQ FS G Sbjct: 59 FDALISGFPCQAFSING 75 >gi|308062397|gb|ADO04285.1| type II DNA modification enzyme [Helicobacter pylori Cuz20] Length = 318 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ ++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----RLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81 >gi|317178577|dbj|BAJ56365.1| Type II DNA modification enzyme [Helicobacter pylori F30] Length = 318 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ ++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----RLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81 >gi|290508755|ref|ZP_06548126.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. 1_1_55] gi|289778149|gb|EFD86146.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. 1_1_55] Length = 477 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + DLF GIGGIR F +C F+SE N ++V+TY+AN+ P F + + Sbjct: 92 FRFVDLFAGIGGIR----NGFEAIGGQCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 147 Query: 59 IKT-----------------QDIPDHDVLLAGFPCQPFSQAG 83 T + IP HDVLLAGFPCQPFS AG Sbjct: 148 DVTLSHRPDVSDEEAAQHIRETIPQHDVLLAGFPCQPFSLAG 189 >gi|288934555|ref|YP_003438614.1| DNA-cytosine methyltransferase [Klebsiella variicola At-22] gi|288889264|gb|ADC57582.1| DNA-cytosine methyltransferase [Klebsiella variicola At-22] Length = 466 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + DLF GIGGIR F +C F+SE N ++V+TY+AN+ P F + + Sbjct: 81 FRFVDLFAGIGGIR----NGFEAIGGQCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 136 Query: 59 IKT-----------------QDIPDHDVLLAGFPCQPFSQAG 83 T + IP HDVLLAGFPCQPFS AG Sbjct: 137 DVTLSHRPDVSDEEAAQHIRETIPQHDVLLAGFPCQPFSLAG 178 >gi|206577074|ref|YP_002237693.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae 342] gi|206566132|gb|ACI07908.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae 342] Length = 477 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + DLF GIGGIR F +C F+SE N ++V+TY+AN+ P F + + Sbjct: 92 FRFVDLFAGIGGIR----NGFEAIGGQCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 147 Query: 59 IKT-----------------QDIPDHDVLLAGFPCQPFSQAG 83 T + IP HDVLLAGFPCQPFS AG Sbjct: 148 DVTLSHRPDVSDEEAAQHIRETIPQHDVLLAGFPCQPFSLAG 189 >gi|300727022|ref|ZP_07060441.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Prevotella bryantii B14] gi|299775566|gb|EFI72157.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Prevotella bryantii B14] Length = 446 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 3/86 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFP-NTLIFGDIA 57 M+ DLF G+GGIR+ Q N +E C F+SEI ++ NFP +I DI Sbjct: 1 MIDYIDLFAGLGGIRIGFTQAANELGLESRCVFTSEIKDSALCALNHNFPGENIIKRDIT 60 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 K+ + +IP ++LL GFPCQ FS AG Sbjct: 61 KVASDEIPHFNILLGGFPCQAFSFAG 86 >gi|213053466|ref|ZP_03346344.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 320 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|217034658|ref|ZP_03440063.1| hypothetical protein HP9810_901g5 [Helicobacter pylori 98-10] gi|216942866|gb|EEC22357.1| hypothetical protein HP9810_901g5 [Helicobacter pylori 98-10] Length = 312 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 5/77 (6%) Query: 8 FC-GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 FC GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+PD Sbjct: 3 FCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTYNFGDLMRINPNDLPD 58 Query: 67 HDVLLAGFPCQPFSQAG 83 D L++GFPCQ FS G Sbjct: 59 FDALISGFPCQAFSING 75 >gi|300931174|ref|ZP_07146520.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 187-1] gi|300461007|gb|EFK24500.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 187-1] Length = 477 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGI + F +C F+SE N ++V+TY+AN P T F DI Sbjct: 92 FRFIDLFAGIGGIC----RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 148 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189 >gi|38347986|ref|NP_941235.1| DNA cytosine methylase [Serratia marcescens] gi|190410308|ref|YP_001965811.1| dcm [Klebsiella pneumoniae] gi|38259463|emb|CAE51691.1| DNA-cytosine methyltransferase [Serratia marcescens] gi|146151102|gb|ABQ02868.1| dcm [Klebsiella pneumoniae] Length = 475 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 44/98 (44%), Positives = 52/98 (53%), Gaps = 24/98 (24%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIF-GDIAKIKT 61 DLF GIGG+R F+ +C F+SE N YS +TY+AN+ N F DI I Sbjct: 96 DLFAGIGGLR----SGFDAIGGKCLFTSEWNTYSSRTYRANWYCDENEHRFNSDIRDITL 151 Query: 62 QD----------------IPDHDVLLAGFPCQPFSQAG 83 + IPDHDVLLAGFPCQPFS AG Sbjct: 152 SNRPEVTDDEAYKFIDASIPDHDVLLAGFPCQPFSIAG 189 >gi|311279100|ref|YP_003941331.1| DNA-cytosine methyltransferase [Enterobacter cloacae SCF1] gi|308748295|gb|ADO48047.1| DNA-cytosine methyltransferase [Enterobacter cloacae SCF1] Length = 492 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + DLF GIGGIR F +C F+SE N ++V+TY+AN+ P F D + Sbjct: 108 FRFIDLFAGIGGIR----HGFEAIGGQCVFTSEWNKHAVRTYKANWYCSPQDHQFNDDIR 163 Query: 59 IKTQD-----------------IPDHDVLLAGFPCQPFSQAG 83 T IP HDVLLAGFPCQPFS AG Sbjct: 164 SVTLSHQPNVTDGEAAEHIRGVIPQHDVLLAGFPCQPFSLAG 205 >gi|127420|sp|P19888|MTBA_BACAR RecName: Full=Modification methylase BanI; Short=M.BanI; AltName: Full=Cytosine-specific methyltransferase BanI gi|216242|dbj|BAA00613.1| BanI modification methylase [Aneurinibacillus aneurinilyticus] Length = 428 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/84 (47%), Positives = 49/84 (58%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH--RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF GIGGIR+ E+ EC SSEI+ + +TY NF GDI +I Sbjct: 3 IKFVDLFAGIGGIRIGFERAAKRFELETECVLSSEIDKKACETYALNFKEEPQ-GDIHEI 61 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + P+ D LLAGFPCQPFS AG Sbjct: 62 TS--FPEFDFLLAGFPCQPFSYAG 83 >gi|109947180|ref|YP_664408.1| C-5 cytosine-specific DNA methylase [Helicobacter acinonychis str. Sheeba] gi|109714401|emb|CAJ99409.1| C-5 cytosine-specific DNA methylase [Helicobacter acinonychis str. Sheeba] Length = 315 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 5/77 (6%) Query: 8 FC-GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 FC GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I D+PD Sbjct: 3 FCSGIGGGRLGLERC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLPD 58 Query: 67 HDVLLAGFPCQPFSQAG 83 DVL++GFPCQ FS G Sbjct: 59 FDVLISGFPCQAFSING 75 >gi|323222462|gb|EGA06833.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] Length = 203 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 24/101 (23%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG----- 54 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F Sbjct: 92 RFIDLFAGIGGIRRGFEAIGG----QCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIRD 147 Query: 55 ------------DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + A+ Q IP HDVLLAGFPCQPFS AG Sbjct: 148 ITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|308184861|ref|YP_003928994.1| type II DNA modification enzyme [Helicobacter pylori SJM180] gi|308060781|gb|ADO02677.1| type II DNA modification enzyme [Helicobacter pylori SJM180] Length = 318 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LE+ +++C +EIN ++KTY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLERC----HLKCVGHAEINHEALKTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALVSGFPCQAFSING 81 >gi|295098276|emb|CBK87366.1| DNA-methyltransferase (dcm) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 477 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIF-GDIA 57 + DLF GIGGIR F +C F+SE N ++V+TY+AN+ P+ F DI Sbjct: 92 FRFIDLFAGIGGIR----HGFEAIGGQCVFTSEWNKHAVRTYKANWYCDPDAHQFNADIR 147 Query: 58 KI----KT------------QDIPDHDVLLAGFPCQPFSQAG 83 + KT IP HDVLLAGFPCQPFS AG Sbjct: 148 DVTLSHKTGVSDEEAAEHIRNTIPAHDVLLAGFPCQPFSLAG 189 >gi|213864727|ref|ZP_03386846.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 237 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/101 (43%), Positives = 52/101 (51%), Gaps = 24/101 (23%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIAK 58 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 92 RFIDLFAGIGGIRRGFEAI----GGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIRD 147 Query: 59 IK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 148 ITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|156933419|ref|YP_001437335.1| DNA cytosine methylase [Cronobacter sakazakii ATCC BAA-894] gi|156531673|gb|ABU76499.1| hypothetical protein ESA_01237 [Cronobacter sakazakii ATCC BAA-894] Length = 481 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 98 FRFIDLFAGIGGIR----SGFEAAGGQCVFTSEWNKHAVRTYKANWYCDPQQHQFNEDIR 153 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 + IP HDVLLAGFPCQPFS AG Sbjct: 154 DVTLSHKPEISDEAAAEHIRACIPQHDVLLAGFPCQPFSLAG 195 >gi|291320332|ref|YP_003515594.1| modification methylase Bsp6I [Mycoplasma agalactiae] gi|290752665|emb|CBH40638.1| Modification methylase Bsp6I [Mycoplasma agalactiae] Length = 315 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 3/83 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K+ LF G+GGI L EQT + + +++E + ++ TY++NF + DI K+ Sbjct: 1 MYKVGSLFAGVGGIDLGFEQTGKFKTI---WANEFDKNAILTYKSNFSTFVSNEDIRKVD 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +DIP+ D++L+GFPC FS AG Sbjct: 58 VRDIPEVDIILSGFPCTSFSVAG 80 >gi|298735876|ref|YP_003728401.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] gi|298355065|emb|CBI65937.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] Length = 312 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 5/77 (6%) Query: 8 FC-GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 FC GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+PD Sbjct: 3 FCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLPD 58 Query: 67 HDVLLAGFPCQPFSQAG 83 D+L++GFPCQ FS G Sbjct: 59 FDMLVSGFPCQAFSING 75 >gi|213024641|ref|ZP_03339088.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 189 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 24/101 (23%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG----- 54 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F Sbjct: 92 RFIDLFAGIGGIRRGFEAIGG----QCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIRD 147 Query: 55 ------------DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + A+ Q IP HDVLLAGFPCQPFS AG Sbjct: 148 ITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|15645735|ref|NP_207912.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter pylori 26695] gi|2314272|gb|AAD08164.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter pylori 26695] Length = 312 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 5/77 (6%) Query: 8 FC-GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 FC GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+PD Sbjct: 3 FCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLPD 58 Query: 67 HDVLLAGFPCQPFSQAG 83 D L++GFPCQ FS G Sbjct: 59 FDALISGFPCQAFSING 75 >gi|313678561|ref|YP_004056301.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis PG45] gi|312950401|gb|ADR24996.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis PG45] Length = 315 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 3/83 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K+ LF G+GGI L EQT + + +++E + ++ TY++NF + DI K+ Sbjct: 1 MYKVGSLFAGVGGIDLGFEQTGKFKTI---WANEFDKNALLTYKSNFSTFVSNVDIRKVN 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD D++L+GFPC FS AG Sbjct: 58 VNDIPDVDIILSGFPCTSFSIAG 80 >gi|163937935|ref|YP_001642821.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis KBAB4] gi|163865790|gb|ABY46846.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis KBAB4] Length = 444 Score = 68.6 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K LF GIGG EQ N + C +SE++ Y+ Y+ + + GDI K+++ Sbjct: 9 FKYVSLFSGIGG----FEQALNGKGGICVMASEVDKYANTAYELIYGKKTV-GDITKVRS 63 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+P HD+L AGFPC FS AG Sbjct: 64 MDVPRHDILTAGFPCPTFSVAG 85 >gi|15612115|ref|NP_223767.1| type II DNA modification (methyltransferase [Helicobacter pylori J99] gi|4155654|gb|AAD06642.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter pylori J99] Length = 321 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLERC----HLKCVGHAEINHEAIRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+P+ DVL++GFPCQ FS G Sbjct: 59 PNDLPNFDVLVSGFPCQAFSING 81 >gi|332362221|gb|EGJ40021.1| DNA methylase [Streptococcus sanguinis SK1056] Length = 412 Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 I F G+GGI L EQT R V +++E + Y+ +TYQ N P+T + G DI ++ + Sbjct: 21 IAAFFSGVGGIELGFEQTNEFRVV---YANEFDKYARQTYQLNHPDTYLDGRDIHDVQPE 77 Query: 63 DIPDH--DVLLAGFPCQPFSQAG 83 DIP DV++ GFPCQ FS AG Sbjct: 78 DIPAERVDVIMGGFPCQAFSIAG 100 >gi|308061739|gb|ADO03627.1| DNA-cytosine methyltransferase [Helicobacter pylori Cuz20] Length = 704 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML DLF GIGG RL L+ ++C FS+E NP+++ YQANF + DI + Sbjct: 1 MLTYADLFAGIGGFRLALDSL----GLKCVFSAENNPHAIAMYQANFDDDST-CDITLLN 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +P+ D+L AGFPCQ FS G Sbjct: 56 PNTMPNFDILCAGFPCQAFSVCG 78 >gi|217032692|ref|ZP_03438178.1| hypothetical protein HPB128_202g26 [Helicobacter pylori B128] gi|216945622|gb|EEC24273.1| hypothetical protein HPB128_202g26 [Helicobacter pylori B128] Length = 211 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 5/77 (6%) Query: 8 FC-GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 FC GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+PD Sbjct: 3 FCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLPD 58 Query: 67 HDVLLAGFPCQPFSQAG 83 D+L++GFPCQ FS G Sbjct: 59 FDMLVSGFPCQAFSING 75 >gi|268610192|ref|ZP_06143919.1| cytosine-specific DNA methylase [Ruminococcus flavefaciens FD-1] Length = 475 Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 + DLF G+GG Q + EC ++E N VKTY+ N+ + GD+ KI Sbjct: 59 FRFIDLFAGVGG----FHQAMRYLGGECVMAAETNQECVKTYKLNYKIDEKEVRGDVNKI 114 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + I DVL AGFPCQPFS+AG Sbjct: 115 DPETIAPFDVLCAGFPCQPFSKAG 138 >gi|317011319|gb|ADU85066.1| type II DNA modification enzyme [Helicobacter pylori SouthAfrica7] Length = 321 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLERC----HLKCVGHAEINDEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+P+ DVL++GFPCQ FS G Sbjct: 59 PNDLPNFDVLISGFPCQAFSING 81 >gi|237732007|ref|ZP_04562488.1| DNA cytosine methylase [Citrobacter sp. 30_2] gi|226907546|gb|EEH93464.1| DNA cytosine methylase [Citrobacter sp. 30_2] Length = 476 Score = 68.2 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANNYCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q +P+HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHHDGVSDQQAAEHIRQHVPEHDVLLAGFPCQPFSLAG 188 >gi|322392562|ref|ZP_08066022.1| DNA methylase [Streptococcus peroris ATCC 700780] gi|321144554|gb|EFX39955.1| DNA methylase [Streptococcus peroris ATCC 700780] Length = 406 Score = 68.2 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 I F G+GGI L EQT R V +++E + Y+ +TYQ N P+T + G DI ++ + Sbjct: 15 IAAFFSGVGGIELGFEQTNEFRVV---YANEFDKYARQTYQLNHPDTYLDGRDIHDVQPE 71 Query: 63 DIPDH--DVLLAGFPCQPFSQAG 83 DIP DV++ GFPCQ FS AG Sbjct: 72 DIPAERVDVIMGGFPCQAFSIAG 94 >gi|260598469|ref|YP_003211040.1| DNA cytosine methylase [Cronobacter turicensis z3032] gi|260217646|emb|CBA31957.1| DNA-cytosine methyltransferase [Cronobacter turicensis z3032] Length = 450 Score = 68.2 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR F +C F+SE N ++V+TY+AN+ P F DI Sbjct: 67 FRFIDLFAGIGGIR----SGFEAAGGQCVFTSEWNKHAVRTYKANWYCDPQLHQFNEDIR 122 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 + IP HDVLLAGFPCQPFS AG Sbjct: 123 DVTLSHKPEVSDEAAADHIRACIPPHDVLLAGFPCQPFSLAG 164 >gi|170718974|ref|YP_001784137.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] gi|168827103|gb|ACA32474.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] Length = 323 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D GIGG RL LE +EC SE++P TYQ F + +GD+ KI Sbjct: 7 LKFMDFCSGIGGGRLGLELN----GMECIAHSELDPNPDLTYQLFFNDKNNYGDLTKINI 62 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+P+ DV+LAGFPCQ FS G Sbjct: 63 NDLPEFDVMLAGFPCQTFSIVG 84 >gi|167920593|ref|ZP_02507684.1| cytosine-specific DNA methylase [Burkholderia pseudomallei BCC215] Length = 454 Score = 68.2 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 11/85 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + DLF G+GG L L++ C +++E + Y+ NF P GDI Sbjct: 4 FRFVDLFAGLGGFHLALQRLGG----TCVYAAEWQEHLRDLYEVNFGLRPE----GDITL 55 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I +D+P HDVL AGFPCQPFS+AG Sbjct: 56 ISPKDVPSHDVLTAGFPCQPFSKAG 80 >gi|307710826|ref|ZP_07647254.1| DNA-cytosine methyltransferase family protein [Streptococcus mitis SK321] gi|307617432|gb|EFN96604.1| DNA-cytosine methyltransferase family protein [Streptococcus mitis SK321] Length = 406 Score = 68.2 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 I F G+GGI L EQT R V +++E + Y+ +TYQ N P+T + G DI ++ + Sbjct: 15 IAAFFSGVGGIELGFEQTNEFRVV---YANEFDKYARQTYQLNHPDTYLDGRDIHDVQPE 71 Query: 63 DIPDH--DVLLAGFPCQPFSQAG 83 DIP DV++ GFPCQ FS AG Sbjct: 72 DIPAERVDVIMGGFPCQAFSIAG 94 >gi|291085206|ref|ZP_06352388.2| DNA (cytosine-5-)-methyltransferase [Citrobacter youngae ATCC 29220] gi|291072321|gb|EFE10430.1| DNA (cytosine-5-)-methyltransferase [Citrobacter youngae ATCC 29220] Length = 476 Score = 67.8 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N ++V+TY+AN P F DI Sbjct: 91 FRFIDLFAGIGGIR----RGFEAIGGQCVFTSEWNKHAVRTYKANNYCDPLQHRFNEDIR 146 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q +P+HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHHDGVSDQQAAEHIRQHVPEHDVLLAGFPCQPFSLAG 188 >gi|322376119|ref|ZP_08050628.1| DNA modification methylase [Streptococcus sp. C300] gi|321278887|gb|EFX55931.1| DNA modification methylase [Streptococcus sp. C300] Length = 406 Score = 67.8 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 I F G+GGI L EQT R V +++E + Y+ +TYQ N P+T + G DI ++ + Sbjct: 15 IAAFFSGVGGIELGFEQTNEFRVV---YANEFDKYARQTYQLNHPDTYLDGRDIHDVQPE 71 Query: 63 DIPDH--DVLLAGFPCQPFSQAG 83 DIP DV++ GFPCQ FS AG Sbjct: 72 DIPAERVDVIMGGFPCQAFSIAG 94 >gi|308183225|ref|YP_003927352.1| type II DNA modification enzyme [Helicobacter pylori PeCan4] gi|308065410|gb|ADO07302.1| type II DNA modification enzyme [Helicobacter pylori PeCan4] Length = 318 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLERC----HLKCVGHAEINDEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+P+ DVL++GFPCQ FS G Sbjct: 59 PNDLPNFDVLVSGFPCQAFSING 81 >gi|210135280|ref|YP_002301719.1| type II R-M system methyltransferase [Helicobacter pylori P12] gi|210133248|gb|ACJ08239.1| type II R-M system methyltransferase [Helicobacter pylori P12] Length = 315 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 5/77 (6%) Query: 8 FC-GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 FC GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I D+PD Sbjct: 3 FCSGIGGGRLGLERC----HLKCVGHAEINHEALRTYELFFKDTYNFGDLMRINPNDLPD 58 Query: 67 HDVLLAGFPCQPFSQAG 83 D L++GFPCQ FS G Sbjct: 59 FDALISGFPCQAFSING 75 >gi|291530357|emb|CBK95942.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3] Length = 317 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF GIGGI L EQ + +++EI+ + KTYQ NFP T LI DI K+ Sbjct: 1 MKLGSLFAGIGGIELGFEQV----GFDIVWANEIDTDACKTYQFNFPKTKLIKSDIRKVN 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++ D++ AGFPCQPFS G Sbjct: 57 FSELEKIDIITAGFPCQPFSVCG 79 >gi|157151353|ref|YP_001449946.1| cytosine-specific methyltransferase [Streptococcus gordonii str. Challis substr. CH1] gi|157076147|gb|ABV10830.1| cytosine-specific methyltransferase [Streptococcus gordonii str. Challis substr. CH1] Length = 406 Score = 67.8 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 I F G+GGI L EQT R V +++E + Y+ +TYQ N P+T + G DI ++ + Sbjct: 15 IAAFFSGVGGIELGFEQTNEFRVV---YANEFDKYARQTYQLNHPDTYLDGRDIHDVQPE 71 Query: 63 DIPDH--DVLLAGFPCQPFSQAG 83 DIP DV++ GFPCQ FS AG Sbjct: 72 DIPAERVDVIMGGFPCQAFSIAG 94 >gi|306824635|ref|ZP_07457980.1| DNA methylase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433203|gb|EFM36174.1| DNA methylase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 410 Score = 67.8 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 6/83 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 I F G+GGI L EQT R V +++E + Y+ +TYQ N P+T + G DI ++ + Sbjct: 15 IAAFFSGVGGIELGFEQTNEFRVV---YANEFDKYARQTYQLNHPDTYLDGRDIHDVQPE 71 Query: 63 DIPDH--DVLLAGFPCQPFSQAG 83 DIP D+++ GFPCQ FS AG Sbjct: 72 DIPVERVDIIMGGFPCQAFSIAG 94 >gi|294678239|ref|YP_003578854.1| cytosine-specific DNA-methyltransferase [Rhodobacter capsulatus SB 1003] gi|294477059|gb|ADE86447.1| site-specific DNA-methyltransferase (cytosine-specific) [Rhodobacter capsulatus SB 1003] Length = 451 Score = 67.8 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 6/82 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF G+GG LE H C F+SE+N Y+ NF GDI + Sbjct: 4 LKFADLFAGLGGFHQALE-GLGH---TCVFASELNSGLADLYEKNF-GIRPHGDIRE-AI 57 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+P HD+L AGFPCQPFS+AG Sbjct: 58 DDVPPHDILCAGFPCQPFSKAG 79 >gi|2765225|emb|CAA73243.1| methylase [Lactococcus lactis subsp. cremoris] Length = 317 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 MLKI F G+GGI L E + +++E + Y+ T++ NF + DI ++ Sbjct: 1 MLKIASFFAGVGGIDLGFENA----GFKTIYANEFDNYAADTFEMNFDVKVDRRDINDVQ 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +IPD D++LAGFPCQ FS AG Sbjct: 57 ADEIPDFDIMLAGFPCQAFSIAG 79 >gi|5420107|emb|CAB46561.1| cytosine-specific methyltransferase [Streptococcus thermophilus] Length = 316 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML + F G+GGI L E+ + +++E + Y+ T++ NF T+ DI + Sbjct: 1 MLTVASFFAGVGGIDLGFEKA----GFKTIYANEFDNYAADTFELNFDVTVDRRDINTVP 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +DIP+ DV+LAGFPCQ FS AG Sbjct: 57 AEDIPNFDVMLAGFPCQAFSIAG 79 >gi|197302809|ref|ZP_03167861.1| hypothetical protein RUMLAC_01538 [Ruminococcus lactaris ATCC 29176] gi|197298046|gb|EDY32594.1| hypothetical protein RUMLAC_01538 [Ruminococcus lactaris ATCC 29176] Length = 333 Score = 67.8 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF G+GG R+ LE +C +S+E N K Y NF + + GDI ++ IP Sbjct: 16 DLFAGLGGFRIALESL----GAKCVYSNEWNVPVQKVYADNFGD-IPEGDITQVDENTIP 70 Query: 66 DHDVLLAGFPCQPFSQAG 83 DHD+L AGFPCQ FS +G Sbjct: 71 DHDILCAGFPCQAFSISG 88 >gi|313651376|gb|EFS15772.1| modification methylase EcoRII [Shigella flexneri 2a str. 2457T] Length = 463 Score = 67.4 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57 + DLF GIGG+R F+ +C F+SE N +S +TY AN+ DI Sbjct: 80 FRFIDLFAGIGGLR----SGFDAIGGKCVFTSEWNQFSRRTYSANWYCDETEHYFNSDIR 135 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 I + IPDHDVLLAGFPCQPFS AG Sbjct: 136 DITLSNLPDVSDDQAYASIDASIPDHDVLLAGFPCQPFSIAG 177 >gi|18466581|ref|NP_569389.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|160431784|ref|YP_001551898.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Choleraesuis] gi|16505897|emb|CAD09776.1| putative DNA modification methylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|159885325|dbj|BAF92929.1| putative DNA modification methylase [Salmonella enterica subsp. enterica serovar Choleraesuis] Length = 475 Score = 67.4 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57 + DLF GIGG+R F+ +C F+SE N +S +TY AN+ DI Sbjct: 92 FRFIDLFAGIGGLR----SGFDAIGGKCVFTSEWNQFSRRTYSANWYCDETEHYFNSDIR 147 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 I + IPDHDVLLAGFPCQPFS AG Sbjct: 148 DITLSNLPDVSDDQAYASIDASIPDHDVLLAGFPCQPFSIAG 189 >gi|260752101|ref|YP_003237616.1| putative DNA modification methylase [Escherichia coli O111:H- str. 11128] gi|257767571|dbj|BAI39065.1| putative DNA modification methylase [Escherichia coli O111:H- str. 11128] Length = 475 Score = 67.4 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57 + DLF GIGG+R F+ +C F+SE N +S +TY AN+ DI Sbjct: 92 FRFIDLFAGIGGLR----SGFDAIGGKCVFTSEWNQFSRRTYSANWYCDETEHYFNSDIR 147 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 I + IPDHDVLLAGFPCQPFS AG Sbjct: 148 DITLSNLPDVSDDQAYASIDASIPDHDVLLAGFPCQPFSIAG 189 >gi|169786848|ref|YP_001700742.1| modification methylase (cytosine-specific methyltransferase)(HpaIIM-like) [Acinetobacter baumannii SDF] gi|169150765|emb|CAP02959.1| modification methylase (Cytosine-specific methyltransferase)(HpaIIM-like) [Acinetobacter baumannii] Length = 366 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/84 (51%), Positives = 51/84 (60%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL F + C FSSEI+ + KTY ANF +T +GDI T Sbjct: 42 FKFIDLFAGIGGFRL----AFQNLGGRCVFSSEIDLAAQKTYTANFGDTP-YGDITLEST 96 Query: 62 QD-IPDH-DVLLAGFPCQPFSQAG 83 +D IPD+ D+L GFPCQ FS AG Sbjct: 97 KDAIPDNFDILCGGFPCQAFSIAG 120 >gi|108563484|ref|YP_627800.1| type II DNA modification enzyme [Helicobacter pylori HPAG1] gi|107837257|gb|ABF85126.1| type II DNA modification enzyme [Helicobacter pylori HPAG1] Length = 313 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 5/77 (6%) Query: 8 FC-GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 FC GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I D+PD Sbjct: 3 FCSGIGGGRLGLERC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLPD 58 Query: 67 HDVLLAGFPCQPFSQAG 83 D L++GFPCQ FS G Sbjct: 59 FDALISGFPCQAFSING 75 >gi|322510834|gb|ADX06148.1| putative C-5 cytosine-specific DNA methyltransferase [Organic Lake phycodnavirus 1] Length = 344 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLFCGIG +F +C S +I+ +TY++N+ L GDI +I+ Sbjct: 69 IKFIDLFCGIGSFHY----SFKKLGWDCVMSCDIDKAVKETYKSNY-GILPLGDITEIEP 123 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++I ++D+L AGFPCQPFSQ G Sbjct: 124 KNITNYDILCAGFPCQPFSQCG 145 >gi|327403407|ref|YP_004344245.1| DNA-cytosine methyltransferase [Fluviicola taffensis DSM 16823] gi|327318915|gb|AEA43407.1| DNA-cytosine methyltransferase [Fluviicola taffensis DSM 16823] Length = 422 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/84 (51%), Positives = 50/84 (59%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL L+ +C F+SE + + KTYQANF + FGDI K T Sbjct: 97 FKFIDLFAGIGGFRLALQNL----GGKCVFTSEWDEQAKKTYQANF-GEIPFGDITKDST 151 Query: 62 QD-IPD-HDVLLAGFPCQPFSQAG 83 + IPD DVL GFPCQ FS AG Sbjct: 152 KAFIPDGFDVLCGGFPCQAFSIAG 175 >gi|317010127|gb|ADU80707.1| DNA-cytosine methyltransferase [Helicobacter pylori India7] Length = 703 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML DLF GIGG RL L+ ++C FS+E NP+++ Y+ANF N DI + Sbjct: 1 MLTYADLFAGIGGFRLALDSL----GLKCVFSAENNPHAIAMYKANF-NDDSTCDITILN 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +P+ D+L AGFPCQ FS G Sbjct: 56 PNTMPNFDILCAGFPCQAFSVCG 78 >gi|207091758|ref|ZP_03239545.1| putative site-specific DNA-methyltransferase [Helicobacter pylori HPKX_438_AG0C1] Length = 703 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML DLF GIGG RL L+ ++C FS+E NP+++ Y+ANF N DI + Sbjct: 1 MLTYADLFAGIGGFRLALDSL----GLKCVFSAENNPHAIAMYKANF-NDDSTCDITILN 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +P+ D+L AGFPCQ FS G Sbjct: 56 PNTMPNFDILCAGFPCQAFSVCG 78 >gi|10957343|ref|NP_058367.1| DNA cytosine methylase [Salmonella typhi] gi|7800396|gb|AAF69992.1|AF250878_153 EcoRII cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi] gi|145849042|emb|CAM91602.1| ecoRII cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 475 Score = 67.0 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57 + DLF GIGG+R F+ +C F+SE N +S +TY AN+ DI Sbjct: 92 FRFIDLFAGIGGLR----SGFDAIGGKCVFTSEWNQFSRRTYSANWYCEDTEHHFNSDIR 147 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 I + IPDHDVLLAGFPCQPFS AG Sbjct: 148 DITLSNLPDVSEDQAYASIAASIPDHDVLLAGFPCQPFSIAG 189 >gi|127417|sp|P25262|MTB1_HERAU RecName: Full=Modification methylase HgiBI; Short=M.HgiBI; AltName: Full=Cytosine-specific methyltransferase HgiBI gi|43478|emb|CAA38927.1| methyltransferase [Herpetosiphon aurantiacus] Length = 437 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 9/84 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI---FGDIAKI 59 + DLF GIGG RL LE C S+EI+ ++K Y+ N+P + GDI I Sbjct: 5 RFIDLFAGIGGFRLGLEAV----GGVCVASAEIDQQAIKVYRQNWPTDGVDHNLGDITAI 60 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 Q +P HDVL+ G PCQP+S AG Sbjct: 61 --QQLPAHDVLVGGVPCQPWSIAG 82 >gi|331270911|ref|YP_004385622.1| putative cytosine-specific DNA methylotransferase [Clostridium botulinum BKT015925] gi|329127303|gb|AEB77247.1| putative cytosine-specific DNA methylotransferase [Clostridium botulinum BKT015925] Length = 318 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 8/82 (9%) Query: 1 MLKITDLFCG--IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 + K +LF G +GG+ LD + EC SE++ Y++K Y++NFPN + +GDI K Sbjct: 3 IFKYLELFAGSGLGGMVLD------NYGGECIGYSEVDKYAIKNYESNFPNKINYGDITK 56 Query: 59 IKTQDIPDHDVLLAGFPCQPFS 80 I +++P D+L+ G PCQ S Sbjct: 57 INEKELPKFDLLIGGSPCQNIS 78 >gi|23100788|ref|NP_694255.1| cytosine-specific DNA-methyltransferase [Oceanobacillus iheyensis HTE831] gi|22779022|dbj|BAC15289.1| cytosine-specific DNA-methyltransferase [Oceanobacillus iheyensis HTE831] Length = 370 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 4/80 (5%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF GIGGI + EQ +++E++ ++ +TY+ NF + LI D+ IK D Sbjct: 5 VASLFAGIGGIDIGFEQA----GARVIWANEMDKHACETYRQNFESKLIEDDVRNIKESD 60 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +PD D++ AG+PC FS AG Sbjct: 61 MPDADIITAGWPCVAFSIAG 80 >gi|258652183|ref|YP_003201339.1| DNA-cytosine methyltransferase [Nakamurella multipartita DSM 44233] gi|258555408|gb|ACV78350.1| DNA-cytosine methyltransferase [Nakamurella multipartita DSM 44233] Length = 467 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56 + DLF G+GG + L + C F++E++P Y N+ + DI Sbjct: 8 FRFVDLFAGLGGFHVALRELGG----ACVFAAELDPTLNALYAENY-QLEAWKDINDLAS 62 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++I +Q++PDHDVL AGFPCQPFS+AG Sbjct: 63 SRIISQEVPDHDVLTAGFPCQPFSKAG 89 >gi|127447|sp|P25266|MTE1_HERAU RecName: Full=Modification methylase HgiEI; Short=M.HgiEI; AltName: Full=Cytosine-specific methyltransferase HgiEI gi|43471|emb|CAA38944.1| methyltransferase [Herpetosiphon aurantiacus] Length = 437 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 9/84 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI---FGDIAKI 59 + DLF GIGG RL LE C S+EI+ ++K Y N+P + GDI +I Sbjct: 5 RFIDLFAGIGGFRLGLEAV----GGVCVASAEIDQQAIKVYWQNWPTDGVDHNLGDITQI 60 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 Q +P HDVL+ G PCQP+S AG Sbjct: 61 --QQLPAHDVLVGGVPCQPWSIAG 82 >gi|254779672|ref|YP_003057778.1| M.HpyAVIII, a type II cytosine specific DNA methyltransferase [Helicobacter pylori B38] gi|254001584|emb|CAX29633.1| M.HpyAVIII, a type II cytosine specific DNA methyltransferase [Helicobacter pylori B38] Length = 318 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLERC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++PD D L++GFPCQ FS G Sbjct: 59 PNNLPDFDALVSGFPCQAFSING 81 >gi|24527986|emb|CAD33713.1| putative DNA methylase [Escherichia coli] Length = 310 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L L+Q+ ++ ++++I +V TY+ N ++ GDIA I + Sbjct: 1 MKVVSLFSGAGGLDLGLKQS----GLDIIWANDIYEDAVDTYKRNIGEHIVLGDIANINS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 DIP+ DV++ GFPCQ FS A Sbjct: 57 SDIPNCDVVVGGFPCQGFSVA 77 >gi|207109252|ref|ZP_03243414.1| putative site-specific DNA-methyltransferase [Helicobacter pylori HPKX_438_CA4C1] Length = 210 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L DLF GIGG RL L+ ++C FS+E NP+++ Y+ANF N DI + Sbjct: 29 LLTYADLFAGIGGFRLALDSL----GLKCVFSAENNPHAIAMYKANF-NDDSTCDITILN 83 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +P+ D+L AGFPCQ FS G Sbjct: 84 PNTMPNFDILCAGFPCQAFSVCG 106 >gi|304398880|ref|ZP_07380750.1| DNA-cytosine methyltransferase [Pantoea sp. aB] gi|304353584|gb|EFM17961.1| DNA-cytosine methyltransferase [Pantoea sp. aB] Length = 458 Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 42/101 (41%), Positives = 50/101 (49%), Gaps = 23/101 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------------- 47 + DLF GIGGIR + F +C F+SE N +V+TY+AN Sbjct: 89 FRFIDLFAGIGGIR----KGFEAIGGKCVFTSEWNKEAVRTYKANHYSDPLEHHFNTDIR 144 Query: 48 ----PNTLIFGD-IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 P L D I + IPDH VLLAGFPCQPFS AG Sbjct: 145 QVTQPEGLTDDDAIYRAIDAAIPDHQVLLAGFPCQPFSLAG 185 >gi|159027646|emb|CAO89510.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 728 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF GIGG RL E +C +S EI+ K Y NF + DI KI Sbjct: 6 LRFIDLFAGIGGFRLAFESV----GYDCVYSCEIDENCRKVYFNNF-QEIPDQDIRKIAI 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+PD +VL AGFPCQPFS +G Sbjct: 61 HDLPDFEVLTAGFPCQPFSISG 82 >gi|311742739|ref|ZP_07716548.1| DNA (cytosine-5-)-methyltransferase [Aeromicrobium marinum DSM 15272] gi|311314367|gb|EFQ84275.1| DNA (cytosine-5-)-methyltransferase [Aeromicrobium marinum DSM 15272] Length = 428 Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--KIKTQD 63 DLF GIGG L + EC ++SEI+ + K YQ N+ N + GDI Sbjct: 12 DLFAGIGGFHAALSELGG----ECVYASEIDEAAAKIYQHNW-NMPVAGDIVPETDPVVK 66 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P HDVL AGFPCQPFS++G Sbjct: 67 VPPHDVLAAGFPCQPFSKSG 86 >gi|308185227|ref|YP_003929360.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SJM180] gi|308061147|gb|ADO03043.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SJM180] Length = 317 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF GIGG+ L F E ++++ + ++V+TY+AN +I GDI +I+ Sbjct: 1 MKIASLFSGIGGLDLG----FIQNGFEIVWANDFDKHAVETYKANIGQNIILGDI-EIEK 55 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 I HD+L+ GFPCQPFS G Sbjct: 56 DHICGHDILIGGFPCQPFSTLG 77 >gi|110643908|ref|YP_671638.1| putative type II 5-cytosoine methyltransferase [Escherichia coli 536] gi|110345500|gb|ABG71737.1| putative type II 5-cytosoine methyltransferase [Escherichia coli 536] Length = 315 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 4/82 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+K+ LF G GG+ L F + + ++++I+ +V TY+ N + ++ D+++I Sbjct: 1 MMKVVSLFSGAGGLDL----GFKNAGFQIVWANDIDSDAVLTYKKNIGDHIVLKDLSQID 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 DIPD DV++ GFPCQ FSQA Sbjct: 57 MDDIPDCDVVIGGFPCQGFSQA 78 >gi|304387412|ref|ZP_07369603.1| modification methylase EcoRII [Neisseria meningitidis ATCC 13091] gi|304338505|gb|EFM04624.1| modification methylase EcoRII [Neisseria meningitidis ATCC 13091] Length = 336 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF GIGG R+ +E C FSSE + + +TYQ NF N + +GDI +T+ I Sbjct: 24 DLFAGIGGFRIAMENVGGR----CVFSSEWDDKARQTYQVNF-NDIPYGDITLKETKAAI 78 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P DVL AGFPCQPFS AG Sbjct: 79 PSKFDVLTAGFPCQPFSIAG 98 >gi|15677157|ref|NP_274310.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis MC58] gi|161870164|ref|YP_001599334.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis 053442] gi|218768314|ref|YP_002342826.1| putative modification methylase [Neisseria meningitidis Z2491] gi|7226530|gb|AAF41666.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis MC58] gi|121052322|emb|CAM08652.1| putative modification methylase [Neisseria meningitidis Z2491] gi|161595717|gb|ABX73377.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis 053442] gi|254670478|emb|CBA06174.1| putative DNA modification methylase [Neisseria meningitidis alpha153] gi|308389411|gb|ADO31731.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis alpha710] gi|316984080|gb|EFV63058.1| modification methylase SsoII [Neisseria meningitidis H44/76] gi|319410559|emb|CBY90927.1| putative type II restriction-modification system enzyme Mod [Neisseria meningitidis WUE 2594] gi|325134466|gb|EGC57111.1| modification methylase EcoRII [Neisseria meningitidis M13399] gi|325136204|gb|EGC58812.1| modification methylase EcoRII [Neisseria meningitidis M0579] gi|325140483|gb|EGC63004.1| modification methylase EcoRII [Neisseria meningitidis CU385] gi|325144567|gb|EGC66866.1| modification methylase EcoRII [Neisseria meningitidis M01-240013] gi|325200082|gb|ADY95537.1| modification methylase EcoRII [Neisseria meningitidis H44/76] gi|325201996|gb|ADY97450.1| modification methylase EcoRII [Neisseria meningitidis M01-240149] gi|325205934|gb|ADZ01387.1| modification methylase EcoRII [Neisseria meningitidis M04-240196] gi|325208252|gb|ADZ03704.1| modification methylase EcoRII [Neisseria meningitidis NZ-05/33] Length = 337 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF GIGG R+ +E C FSSE + + +TYQ NF N + +GDI +T+ I Sbjct: 24 DLFAGIGGFRIAMENVGGR----CVFSSEWDDKARQTYQVNF-NDIPYGDITLKETKAAI 78 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P DVL AGFPCQPFS AG Sbjct: 79 PSKFDVLTAGFPCQPFSIAG 98 >gi|325130344|gb|EGC53110.1| modification methylase EcoRII [Neisseria meningitidis OX99.30304] Length = 337 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF GIGG R+ +E C FSSE + + +TYQ NF N + +GDI +T+ I Sbjct: 24 DLFAGIGGFRIAMENVGGR----CVFSSEWDDKARQTYQVNF-NDIPYGDITLKETKAAI 78 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P DVL AGFPCQPFS AG Sbjct: 79 PSKFDVLTAGFPCQPFSIAG 98 >gi|167837977|ref|ZP_02464836.1| modification methylase HaeII [Burkholderia thailandensis MSMB43] Length = 111 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF G+GG L L++ C +++E + Y+ NF GDI I Sbjct: 4 FRFVDLFAGLGGFHLALQRL----GGTCVYAAEWQEHLRDLYEVNF-GLRPEGDITLISP 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +D+P HDVL AGFPCQPFS+AG Sbjct: 59 KDVPSHDVLTAGFPCQPFSKAG 80 >gi|111607698|gb|ABH10736.1| DNA methyltransferase [Flavobacterium sp. 4H] Length = 408 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL L+ +C F+SE N + KTY+ NF + FGDI K + Sbjct: 95 FKFIDLFAGIGGFRLALQNV----GGKCVFTSEWNNEAQKTYRENF-GEVPFGDITKERN 149 Query: 62 QD-IPDH-DVLLAGFPCQPFSQAG 83 ++ IP+ D+L AGFPCQ FS AG Sbjct: 150 KNYIPEKFDILCAGFPCQAFSIAG 173 >gi|327399867|ref|YP_004346898.1| cytosine-specific methyltransferase [Lactobacillus amylovorus GRL 1112] gi|327182537|gb|AEA32972.1| cytosine-specific methyltransferase [Lactobacillus amylovorus GRL 1112] Length = 401 Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 4/81 (4%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 I F G+GGI L +QT R V +++E + + KTY N P T + G DI +K+ Sbjct: 12 IDAFFAGVGGIELGFKQTGEFRVV---YANEFDKNARKTYAENNPETPLDGRDIHDVKSD 68 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +IPD +V++ GFPCQ FS AG Sbjct: 69 EIPDSNVIMGGFPCQAFSIAG 89 >gi|327394286|dbj|BAK11708.1| modification methylase EcoRII [Pantoea ananatis AJ13355] Length = 459 Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 41/101 (40%), Positives = 50/101 (49%), Gaps = 23/101 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + DLF GIGGIR E+ +C F+SE N +++TY+AN P F + Sbjct: 89 FRFIDLFAGIGGIRRGFERIGG----KCVFTSEWNKEAIRTYRANHYSDPAEHHFNTDIR 144 Query: 59 IKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 TQ IPDH VLLAGFPCQPFS AG Sbjct: 145 QVTQPAGLTDEQAIYQSIDAAIPDHQVLLAGFPCQPFSLAG 185 >gi|291617874|ref|YP_003520616.1| EcoRIIM [Pantoea ananatis LMG 20103] gi|291152904|gb|ADD77488.1| EcoRIIM [Pantoea ananatis LMG 20103] Length = 459 Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 41/101 (40%), Positives = 50/101 (49%), Gaps = 23/101 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + DLF GIGGIR E+ +C F+SE N +++TY+AN P F + Sbjct: 89 FRFIDLFAGIGGIRRGFERIGG----KCVFTSEWNKEAIRTYRANHYSDPAEHHFNTDIR 144 Query: 59 IKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 TQ IPDH VLLAGFPCQPFS AG Sbjct: 145 QVTQPAGLTDEQAIYQSIDAAIPDHQVLLAGFPCQPFSLAG 185 >gi|220929948|ref|YP_002506857.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] gi|220000276|gb|ACL76877.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] Length = 338 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF G+GG R+ LE +C +S+E + K Y NF + + GDI +I Sbjct: 12 FKFIDLFAGLGGFRIALESL----GAKCVYSNEWDKPVRKVYTDNFGD-IPEGDITQINE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP+HD+L AGFPCQ FS +G Sbjct: 67 NSIPEHDILCAGFPCQAFSISG 88 >gi|329121769|ref|ZP_08250386.1| DNA (cytosine-5-)-methyltransferase [Dialister micraerophilus DSM 19965] gi|327468239|gb|EGF13725.1| DNA (cytosine-5-)-methyltransferase [Dialister micraerophilus DSM 19965] Length = 416 Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV---ECFFSSEINPYSVKTYQANFPNTLIFG-DIA 57 +K+ DLF G+GG L L + N V + S N ++ Y+ NFP T I DI Sbjct: 6 IKVVDLFAGVGGFHLGLSRASNRYEVVWANQYEPSRKNQFAYNIYKKNFPKTPISNEDIR 65 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82 KI +IP D+L+AGFPCQ +S A Sbjct: 66 KINKDEIPKMDLLVAGFPCQDYSVA 90 >gi|256819660|ref|YP_003140939.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271] gi|256581243|gb|ACU92378.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271] Length = 318 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF G+GG R L+ EC FSSE + ++ +TY+ N+ + FGDI +T Sbjct: 5 VKFIDLFAGVGGFRYALQNI----GAECVFSSEWDKFAQQTYKLNY-GEVPFGDITLQET 59 Query: 62 QD-IPDH-DVLLAGFPCQPFSQAG 83 +D IP+ D+L AGFPCQ FS AG Sbjct: 60 KDNIPNEFDILCAGFPCQAFSIAG 83 >gi|313668796|ref|YP_004049080.1| C-5 cytosine-specific DNA-methylase [Neisseria lactamica ST-640] gi|313006258|emb|CBN87720.1| C-5 cytosine-specific DNA-methylase [Neisseria lactamica 020-06] Length = 362 Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 40/80 (50%), Positives = 50/80 (62%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT-QDI 64 DLF GIGG R+ ++ EC FSSE + + +TY+ANF + FGDI +T Q I Sbjct: 40 DLFAGIGGFRIAMQNLGG----ECVFSSEWDEKAKQTYEANF-GEVPFGDITLEETKQCI 94 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P+ DVL AGFPCQ FS AG Sbjct: 95 PEQFDVLCAGFPCQAFSIAG 114 >gi|195867949|ref|ZP_03079946.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195660345|gb|EDX53605.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] Length = 319 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF GIGGI +Q + +++EI+ + KTY+ NF ++ L+ GDI I Sbjct: 4 IKVASLFAGIGGICYGFKQA----GAKIVWANEIDRDACKTYRYNFGDSYLVEGDIKNIG 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD D+L GFPCQ FS AG Sbjct: 60 PNDIPDIDILNGGFPCQAFSIAG 82 >gi|308187315|ref|YP_003931446.1| DNA cytosine methylase [Pantoea vagans C9-1] gi|308057825|gb|ADO09997.1| DNA cytosine methylase [Pantoea vagans C9-1] Length = 458 Score = 64.3 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 43/101 (42%), Positives = 53/101 (52%), Gaps = 23/101 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR + F +C F+SE N +V+TY+AN P F DI Sbjct: 89 FRFIDLFAGIGGIR----KGFEAIGGKCVFTSEWNKEAVRTYKANHYSDPLEHHFNTDIR 144 Query: 58 KIK-----TQD----------IPDHDVLLAGFPCQPFSQAG 83 ++ T D +PDH VLLAGFPCQPFS AG Sbjct: 145 QVTQPEGLTDDEEIYRAIDAAVPDHQVLLAGFPCQPFSLAG 185 >gi|209554428|ref|YP_002284952.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|209541929|gb|ACI60158.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] Length = 319 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF GIGGI +Q + +++EI+ + KTY+ NF ++ L+ GDI I Sbjct: 4 IKVASLFAGIGGICYGFKQA----GAKIVWANEIDRDACKTYRYNFGDSYLVEGDIKNIG 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD D+L GFPCQ FS AG Sbjct: 60 PNDIPDIDILNGGFPCQAFSIAG 82 >gi|171920707|ref|ZP_02931926.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185179015|ref|ZP_02964765.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024024|ref|ZP_02996783.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518336|ref|ZP_03003849.1| cytosine-specific methyltransferase NlaX [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524309|ref|ZP_03004347.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198273488|ref|ZP_03206024.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225550923|ref|ZP_03771872.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551062|ref|ZP_03772008.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903447|gb|EDT49736.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209104|gb|EDU06147.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188019052|gb|EDU57092.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997975|gb|EDU67072.1| cytosine-specific methyltransferase NlaX [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660089|gb|EDX53469.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198250008|gb|EDY74788.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225378877|gb|EEH01242.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225380077|gb|EEH02439.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 319 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF GIGGI +Q + +++EI+ + KTY+ NF ++ L+ GDI I Sbjct: 4 IKVASLFAGIGGICYGFKQA----GAKIVWANEIDRDACKTYRYNFGDSYLVEGDIKNIG 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD D+L GFPCQ FS AG Sbjct: 60 PNDIPDIDILNGGFPCQAFSIAG 82 >gi|313674544|ref|YP_004052540.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] gi|312941242|gb|ADR20432.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] Length = 420 Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG R+ ++ +C F+SE + + TY+ANF FGDI K +T Sbjct: 98 FKFIDLFAGIGGFRIAMQNLGG----KCIFTSEWDSKAKVTYRANFGEE-PFGDITKEET 152 Query: 62 QD-IPDH-DVLLAGFPCQPFSQAG 83 + IPD+ D+L AGFPCQ FS AG Sbjct: 153 KSYIPDNFDLLCAGFPCQAFSIAG 176 >gi|218900599|ref|YP_002449010.1| modification methylase HaeIII [Bacillus cereus G9842] gi|218543463|gb|ACK95857.1| modification methylase HaeIII [Bacillus cereus G9842] Length = 313 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L Q + + ++++I+ +V+TY+ N N ++ D+ ++ T Sbjct: 1 MKVISLFSGAGGLDLGFVQAGH----QIIWANDIDKDAVETYKKNLGNHIVLKDLKEVDT 56 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 DIPD D+++ GFPCQ FS A Sbjct: 57 NDIPDADIVIGGFPCQGFSVA 77 >gi|16077674|ref|NP_388488.1| DNA-methyltransferase [Bacillus subtilis subsp. subtilis str. 168] gi|221308443|ref|ZP_03590290.1| hypothetical protein Bsubs1_03408 [Bacillus subtilis subsp. subtilis str. 168] gi|221312765|ref|ZP_03594570.1| hypothetical protein BsubsN3_03384 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317688|ref|ZP_03598982.1| hypothetical protein BsubsJ_03343 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321964|ref|ZP_03603258.1| hypothetical protein BsubsS_03414 [Bacillus subtilis subsp. subtilis str. SMY] gi|81669152|sp|O34680|YDIP_BACSU RecName: Full=Probable BsuMI modification methylase subunit ydiP; Short=M2.BsuMI; AltName: Full=Cytosine-specific methyltransferase M2.BsuMI gi|2521998|dbj|BAA22751.1| ydiP [Bacillus subtilis] gi|2632920|emb|CAB12426.1| DNA-methyltransferase (cytosine-specific) [Bacillus subtilis subsp. subtilis str. 168] Length = 389 Score = 63.9 bits (154), Expect = 6e-09, Method: Composition-based stats. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 6/82 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIGGI L L Q+ + + C E++P + NFP I DI +I+ Sbjct: 1 MKVVSLFSGIGGIELGLHQSGHTTEIFC----EVDPLAKAVLSKNFPGVKIEDDINEIR- 55 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++P D++ AGFPCQ SQAG Sbjct: 56 -ELPSCDLVAAGFPCQDLSQAG 76 >gi|296126993|ref|YP_003634245.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563] gi|296018809|gb|ADG72046.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563] Length = 324 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGG R+ LE +C +S+E + ++ ++Y NF + + DI KI + IP Sbjct: 16 DLFAGIGGFRIALESL----GAKCVYSNEWDKFAKESYYKNFGD-IPDDDITKIDEKLIP 70 Query: 66 DHDVLLAGFPCQPFSQAG 83 HD+L AGFPCQ FS +G Sbjct: 71 AHDILCAGFPCQAFSISG 88 >gi|254410214|ref|ZP_05023994.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196183250|gb|EDX78234.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 392 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 6/79 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDI 64 +LFCGIGG R+ +Q RN+ ++++ P + + Y+ F + GDI ++ +I Sbjct: 11 ELFCGIGGFRIAADQ----RNIATIWANDRCPKACQVYRDRFGKAQLHQGDIYQL-VDEI 65 Query: 65 PDHDVLLAGFPCQPFSQAG 83 P HD+L AGFPCQPFS AG Sbjct: 66 PPHDLLTAGFPCQPFSSAG 84 >gi|224438066|ref|ZP_03659005.1| DNA-cytosine methyltransferase [Helicobacter cinaedi CCUG 18818] Length = 342 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 7/79 (8%) Query: 8 FC-GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKIKTQDI 64 FC GIGG RL LE ++C SEI+ ++KTY+ N N L GD+ +I Q + Sbjct: 25 FCSGIGGGRLGLESC----GLKCLGFSEIDRAAIKTYKTFFNTSNELELGDLTQINPQSL 80 Query: 65 PDHDVLLAGFPCQPFSQAG 83 PD D+L++GFPCQ FS G Sbjct: 81 PDFDLLISGFPCQSFSIVG 99 >gi|119510471|ref|ZP_01629604.1| DNA cytosine methylase [Nodularia spumigena CCY9414] gi|119464893|gb|EAW45797.1| DNA cytosine methylase [Nodularia spumigena CCY9414] Length = 727 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 39/82 (47%), Positives = 46/82 (56%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF GIGG RL E+ + EC FS EI+ + Y NF + DI KI Sbjct: 6 LKFGDLFAGIGGFRLAFEKA----DYECVFSCEIDQACQQVYLNNFGDKP-ECDIRKIDL 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + +P DVL AGFPCQPFS G Sbjct: 61 EKLPYFDVLTAGFPCQPFSICG 82 >gi|331677320|ref|ZP_08377999.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H591] gi|331075055|gb|EGI46371.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H591] Length = 415 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNH--RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 M+K DLF G GGIRL EQ + +C SSEI+ + +TY+ NF + DI Sbjct: 1 MIKFVDLFSGTGGIRLGFEQAMKEIGLSTKCVKSSEIDKKACETYKLNFDEE-SYCDIHD 59 Query: 59 IKTQDIPDH-DVLLAGFPCQPFSQAG 83 + DI + DVLLAGFPCQ FS AG Sbjct: 60 V---DIDESFDVLLAGFPCQAFSYAG 82 >gi|313144510|ref|ZP_07806703.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi CCUG 18818] gi|313129541|gb|EFR47158.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi CCUG 18818] Length = 323 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 7/79 (8%) Query: 8 FC-GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKIKTQDI 64 FC GIGG RL LE ++C SEI+ ++KTY+ N N L GD+ +I Q + Sbjct: 6 FCSGIGGGRLGLESC----GLKCLGFSEIDRAAIKTYKTFFNTSNELELGDLTQINPQSL 61 Query: 65 PDHDVLLAGFPCQPFSQAG 83 PD D+L++GFPCQ FS G Sbjct: 62 PDFDLLISGFPCQSFSIVG 80 >gi|150026305|ref|YP_001297131.1| Type II modification methyltransferase HpaII [Flavobacterium psychrophilum JIP02/86] gi|149772846|emb|CAL44330.1| Type II modification methyltransferase HpaII [Flavobacterium psychrophilum JIP02/86] Length = 425 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG R+ ++ +C F+SE + + KTY+AN+ + FGDI K + Sbjct: 95 FKFVDLFAGIGGFRMAMQNLGG----KCVFTSEWDKEAQKTYRANY-GEVPFGDITKQQI 149 Query: 62 QD-IPDH-DVLLAGFPCQPFSQAG 83 +D IP D+L AGFPCQ FS AG Sbjct: 150 KDYIPSEFDLLCAGFPCQAFSIAG 173 >gi|227357019|ref|ZP_03841390.1| DNA-cytosine methyltransferase [Proteus mirabilis ATCC 29906] gi|261345118|ref|ZP_05972762.1| DNA (cytosine-5-)-methyltransferase [Providencia rustigianii DSM 4541] gi|227162822|gb|EEI47782.1| DNA-cytosine methyltransferase [Proteus mirabilis ATCC 29906] gi|282566805|gb|EFB72340.1| DNA (cytosine-5-)-methyltransferase [Providencia rustigianii DSM 4541] Length = 301 Score = 63.5 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 4/80 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K++ F GIGG L LE++ + F EIN + N+P+ ++ DI +K Sbjct: 10 KVSSFFAGIGGFDLGLERS----GMNVVFQCEINKFCQSVLNKNWPDIPLYTDITNLKAN 65 Query: 63 DIPDHDVLLAGFPCQPFSQA 82 DIPD +V GFPCQ S A Sbjct: 66 DIPDSNVWCGGFPCQDVSSA 85 >gi|27497145|gb|AAO17336.1| methylase [Neisseria lactamica] Length = 384 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF GIGG R+ ++ EC FSSE + + +TY+ANF + FGDI +T+ I Sbjct: 62 DLFAGIGGFRIAMQNL----GGECVFSSEWDEKAKQTYEANF-GEVPFGDITLEETKQCI 116 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P+ DVL AGFPCQ FS AG Sbjct: 117 PEQFDVLCAGFPCQAFSIAG 136 >gi|313201769|ref|YP_004040427.1| modification methylase [Methylovorus sp. MP688] gi|312441085|gb|ADQ85191.1| putative modification methylase [Methylovorus sp. MP688] Length = 378 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +K +LF GIGG RL +++N+ F+++I + Y + F +++ GDI Sbjct: 1 MKAVELFSGIGGFRL----ACDNKNIRTVFANDIKTLACDVYASQFGTSVLHRGDIKDFF 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQPFS AG Sbjct: 57 DK-IPDHDLLTAGFPCQPFSSAG 78 >gi|261400408|ref|ZP_05986533.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970] gi|269209852|gb|EEZ76307.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970] Length = 362 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF GIGG R+ ++ EC FSSE + + +TY+ANF + FGDI +T+ I Sbjct: 40 DLFAGIGGFRIAMQNL----GGECVFSSEWDEKAKQTYEANF-GEVPFGDITLEETKQCI 94 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P+ DVL AGFPCQ FS AG Sbjct: 95 PEQFDVLCAGFPCQAFSIAG 114 >gi|67924690|ref|ZP_00518097.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67853467|gb|EAM48819.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 420 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 M+ DLF GIGG+RL LE N+E C SSEI+ + +TY NF + + GDI Sbjct: 1 MINFIDLFAGIGGMRLGLELACKKLNIETRCILSSEIDYKACETYALNF-DEIPQGDIKN 59 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I I + +LAG PCQPFS AG Sbjct: 60 I--DKISSFNFILAGSPCQPFSYAG 82 >gi|309378773|emb|CBX22599.1| putative DNA cytosine methyltransferase [Neisseria lactamica Y92-1009] Length = 342 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF GIGG R+ ++ EC FSSE + + +TY+ANF + FGDI +T+ I Sbjct: 20 DLFAGIGGFRIAMQNL----GGECVFSSEWDEKAKQTYEANF-GEVPFGDITLEETKQCI 74 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P+ DVL AGFPCQ FS AG Sbjct: 75 PEQFDVLCAGFPCQAFSIAG 94 >gi|24527985|emb|CAD33712.1| putative DNA methylase [Escherichia coli] Length = 314 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L F + + ++++I+ +V TY+ N + ++ D+++I Sbjct: 1 MKVVSLFSGAGGLDL----GFKNAGFQIVWANDIDSDAVLTYKKNIGDHIVLRDLSQIDM 56 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 DIPD DV++ GFPCQ FSQA Sbjct: 57 DDIPDCDVVIGGFPCQGFSQA 77 >gi|326798326|ref|YP_004316145.1| DNA-cytosine methyltransferase [Sphingobacterium sp. 21] gi|326549090|gb|ADZ77475.1| DNA-cytosine methyltransferase [Sphingobacterium sp. 21] Length = 409 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF GIGG RL + +C F+SE N + +TY+ANF + FGDI K T+ I Sbjct: 89 DLFAGIGGFRLACQNL----GGKCVFTSEWNESAKRTYEANFAE-VPFGDITKESTKAFI 143 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P DVL AGFPCQ FS AG Sbjct: 144 PKQFDVLCAGFPCQAFSIAG 163 >gi|303285300|ref|XP_003061940.1| predicted protein [Micromonas pusilla CCMP1545] gi|226456351|gb|EEH53652.1| predicted protein [Micromonas pusilla CCMP1545] Length = 341 Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 11/86 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDIA 57 ++LF G+GG + L F+SE+ P++ +TY AN P LI GDI Sbjct: 4 SELFAGVGGFGIALRSLGG----SVVFASEMCPHARRTYAANNVVEIGDAPPALIVGDIT 59 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + IP HD+L GFPCQ FSQ G Sbjct: 60 DVCEDIIPPHDILTGGFPCQSFSQRG 85 >gi|167854495|ref|ZP_02477276.1| cyclic 3',5'-adenosine monophosphate phosphodiesterase [Haemophilus parasuis 29755] gi|219872138|ref|YP_002476513.1| DNA-cytosine methyltransferase/C-5 cytosine-specific DNA methylase [Haemophilus parasuis SH0165] gi|167854250|gb|EDS25483.1| cyclic 3',5'-adenosine monophosphate phosphodiesterase [Haemophilus parasuis 29755] gi|219692342|gb|ACL33565.1| DNA-cytosine methyltransferase/C-5 cytosine-specific DNA methylase [Haemophilus parasuis SH0165] Length = 320 Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 8/90 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNT-LIF 53 ++ LF G GG+ L + F+ N E ++++IN + KT + NFP T ++ Sbjct: 5 FRVISLFSGAGGLDLGFKGGFDFLNKRYDENPFEVVWANDINEKACKTLKHNFPETPVVC 64 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GDI + +P+ DV+L GFPCQ FS AG Sbjct: 65 GDITLVDKSTLPEADVVLGGFPCQDFSLAG 94 >gi|282859944|ref|ZP_06269032.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010] gi|282587347|gb|EFB92564.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010] Length = 448 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/80 (50%), Positives = 50/80 (62%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF GIGG R+ + Q R C FSSE + + KTY N+ + FGDI + +T+ I Sbjct: 118 DLFAGIGGFRMAM-QNLGGR---CVFSSEWDIQAQKTYFLNY-GEVPFGDITQERTKAYI 172 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 PDH D+L AGFPCQ FS AG Sbjct: 173 PDHFDILCAGFPCQAFSLAG 192 >gi|322510825|gb|ADX06139.1| putative C-5 cytosine-specific DNA methyltransferase [Organic Lake phycodnavirus 1] Length = 390 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/92 (41%), Positives = 47/92 (51%), Gaps = 18/92 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV-------ECFFSSEINPYSVKTYQANF---PNTL 51 +K DLFCG+G FN N+ C +S+IN K Y+ N+ P Sbjct: 79 VKYIDLFCGLGA----FHTAFNRNNILQNEVKYTCVLASDINECVRKIYEENYGIKPE-- 132 Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GDI KI +PD D+L AGFPCQPFS AG Sbjct: 133 --GDINKINIDTMPDFDILCAGFPCQPFSIAG 162 >gi|252957|gb|AAA09969.1| methyltransferase [Herpetosiphon aurantiacus] Length = 437 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 5/82 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61 + DLF GIGG RL LE C S+EI+ ++K Y+ N+P ++ I T Sbjct: 5 RFIDLFAGIGGFRLGLEAVGGI----CVGSAEIDQQAIKVYRQNWPTDRSEHNLGDITTL 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 Q +P HD+++ G PCQP+S AG Sbjct: 61 QQLPAHDLVVGGVPCQPWSIAG 82 >gi|127435|sp|P25264|MTC2_HERAU RecName: Full=Modification methylase HgiCII; Short=M.HgiCII; AltName: Full=Cytosine-specific methyltransferase HgiCII gi|43464|emb|CAA38935.1| methyltransferase [Herpetosiphon aurantiacus] Length = 437 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 5/82 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61 + DLF GIGG RL LE C S+EI+ ++K Y+ N+P ++ I T Sbjct: 5 RFIDLFAGIGGFRLGLEAVGGI----CVGSAEIDQQAIKVYRQNWPTDRSEHNLGDITTL 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 Q +P HD+++ G PCQP+S AG Sbjct: 61 QQLPAHDLVVGGVPCQPWSIAG 82 >gi|295110826|emb|CBL24779.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162] Length = 312 Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L F + +++++ +V+TY+ N + +I DI+KIK Sbjct: 1 MKVVSLFSGAGGLDLG----FKMAGHDIIWANDMYADAVETYKKNIGDHIICEDISKIKA 56 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 +DIPD D+++ GFPCQ FS A Sbjct: 57 EDIPDCDIIIGGFPCQGFSVA 77 >gi|308184574|ref|YP_003928707.1| site-specific DNA methylase [Helicobacter pylori SJM180] gi|308060494|gb|ADO02390.1| site-specific DNA methylase [Helicobacter pylori SJM180] Length = 405 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L F E ++++ +V+TYQ N + +I+GDI KI + Sbjct: 7 KIISLFSGCGGLDL----GFIKEGFEVIWANDFFKEAVETYQKNIGSHIIYGDITKIPSG 62 Query: 63 DIPDH-DVLLAGFPCQPFSQA 82 DIP+ DVLL GFPCQ FS A Sbjct: 63 DIPNECDVLLGGFPCQGFSVA 83 >gi|305665822|ref|YP_003862109.1| DNA (cytosine-5-)-methyltransferase [Maribacter sp. HTCC2170] gi|88710593|gb|EAR02825.1| DNA (cytosine-5-)-methyltransferase [Maribacter sp. HTCC2170] Length = 408 Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 11/88 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54 LK+ +LF G+GG RL LE T N+ E +S++ P + K A+ FG Sbjct: 4 LKVIELFAGVGGFRLGLENTGNY---EVVWSNQWEP-ATKAQHASMVYEARFGSENHSNQ 59 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI+++ T +IPD D+L+ GFPCQ +S A Sbjct: 60 DISEVPTGEIPDADILVGGFPCQDYSVA 87 >gi|328947436|ref|YP_004364773.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447760|gb|AEB13476.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 439 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF GIGG RL ++ +C FSSE + + +TY N+ + FGDI K + +D I Sbjct: 100 DLFAGIGGFRLAMQSC----GGQCVFSSEWDDAAKQTYFENY-GEVPFGDITKTEIKDLI 154 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P DVL AGFPCQPFS +G Sbjct: 155 PKKFDVLCAGFPCQPFSYSG 174 >gi|57116673|gb|AAW33810.1| M.HinP1I methyltransferase [Haemophilus influenzae] Length = 322 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D GIGG RL LE +EC SE++ KTY+ F ++ GD+ ++ Sbjct: 4 LKFIDFCAGIGGGRLGLELN----GMECIAHSEVDLNPAKTYEIFFNDSRNLGDLTQLAP 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + +PD D+++AGFPCQ FS G Sbjct: 60 KSLPDFDLMIAGFPCQTFSIIG 81 >gi|2760954|gb|AAB95336.1| EaeI methyltransferase alpha subunit [Enterobacter aerogenes] Length = 309 Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 4/80 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K++ F GIGG L LE+ +E F EIN + K + N+PN + DI ++ Sbjct: 10 KVSSFFAGIGGFDLGLEKA----GMEVVFQCEINKFCQKVLRKNWPNVPLHTDITQLNAD 65 Query: 63 DIPDHDVLLAGFPCQPFSQA 82 +IP+ V GFPCQ S A Sbjct: 66 EIPESSVWCGGFPCQDVSSA 85 >gi|269978372|gb|ACZ55920.1| putative type I restriction-modification system specificity subunit S [Helicobacter pylori] Length = 263 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L F E ++++ +V+TYQ N + +++GDI KI + Sbjct: 11 KIISLFSGCGGLDL----GFIKEGFEVIWANDFFKEAVETYQKNIGSHIVYGDITKIPSG 66 Query: 63 DIPDH-DVLLAGFPCQPFSQA 82 DIP+ DVLL GFPCQ FS A Sbjct: 67 DIPNECDVLLGGFPCQGFSVA 87 >gi|260591129|ref|ZP_05856587.1| modification methylase AluI [Prevotella veroralis F0319] gi|260536994|gb|EEX19611.1| modification methylase AluI [Prevotella veroralis F0319] Length = 452 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 8/80 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI--AKIKTQD 63 DLF G+GG L L++ +C F+SE+ Y+ NF N G+I IKT D Sbjct: 14 DLFAGLGGFHLALQKL----GCKCVFASELQTDLQTLYERNF-NMKCSGNINDVNIKT-D 67 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 IP HD+L GFPCQPFSQAG Sbjct: 68 IPHHDILCGGFPCQPFSQAG 87 >gi|253569226|ref|ZP_04846636.1| cytosine-specific DNA methylase [Bacteroides sp. 1_1_6] gi|251841245|gb|EES69326.1| cytosine-specific DNA methylase [Bacteroides sp. 1_1_6] Length = 448 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 6/82 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + DLF G+GG L LE+ +C F+SE+ + Y N GDI ++ + Sbjct: 5 RFIDLFAGLGGFHLALEKL----GCKCVFASELQQELQELYYLNH-GIKCHGDINQVNIK 59 Query: 63 -DIPDHDVLLAGFPCQPFSQAG 83 DIP HD+L AGFPCQPFS+AG Sbjct: 60 NDIPSHDILCAGFPCQPFSKAG 81 >gi|113971536|ref|YP_735329.1| DNA-cytosine methyltransferase [Shewanella sp. MR-4] gi|113886220|gb|ABI40272.1| DNA-cytosine methyltransferase [Shewanella sp. MR-4] Length = 417 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/91 (43%), Positives = 46/91 (50%), Gaps = 14/91 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG L L + + FSSE + + TY N+ T FGDI + Sbjct: 82 FKFIDLFAGIGGFNLAL----TSQGGKAVFSSEWDKSAKITYFNNYGKTP-FGDINQFTA 136 Query: 62 QD---------IPDHDVLLAGFPCQPFSQAG 83 Q IPDHDVL GFPCQPFS AG Sbjct: 137 QGVSNEFIETMIPDHDVLAGGFPCQPFSHAG 167 >gi|57505223|ref|ZP_00371152.1| cytosine specific DNA methyltransferase (BSP6IM) [Campylobacter upsaliensis RM3195] gi|57016359|gb|EAL53144.1| cytosine specific DNA methyltransferase (BSP6IM) [Campylobacter upsaliensis RM3195] Length = 326 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 7/79 (8%) Query: 8 FC-GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKIKTQDI 64 FC GIGG RL LE +C SEI+ ++KTY+ F N L GD+ +I Q + Sbjct: 6 FCSGIGGGRLGLESC----GFKCLGFSEIDRAAIKTYKTFFDTSNELELGDLTQINPQSL 61 Query: 65 PDHDVLLAGFPCQPFSQAG 83 PD D+L++GFPCQ FS G Sbjct: 62 PDFDLLISGFPCQSFSIVG 80 >gi|220903552|ref|YP_002478864.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867851|gb|ACL48186.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 310 Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++I LF G GG+ L L Q + E ++++ + V TY+ N N + GDI KI Sbjct: 1 MRIVSLFSGAGGLDLGLIQAGH----EIVWANDFDKDCVATYKKNIGNHAVLGDIKKINA 56 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 IP +V++ GFPCQ FSQA Sbjct: 57 SQIPRGEVVVGGFPCQGFSQA 77 >gi|110643909|ref|YP_671639.1| putative type II 5-cytosoine methyltransferase [Escherichia coli 536] gi|110345501|gb|ABG71738.1| putative type II 5-cytosoine methyltransferase [Escherichia coli 536] Length = 305 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 +F G GG+ L L+Q+ ++ ++++I +V TY+ N ++ GDIA I + DIP+ Sbjct: 1 MFSGAGGLDLGLKQS----GLDIIWANDIYEDAVDTYKRNIGEHIVLGDIANINSSDIPN 56 Query: 67 HDVLLAGFPCQPFSQA 82 DV++ GFPCQ FS A Sbjct: 57 CDVVVGGFPCQGFSVA 72 >gi|20385949|gb|AAM21516.1|AF438205_2 GST-M.SPRX methyltransferase fusion protein [Mutation screening vector pSPRX] Length = 659 Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV----ECFFSSEINPYSVKTYQA--NFPNTLIFGD 55 L++ LF GIGG L RN+ E SEI+ Y+VK++ A N L FGD Sbjct: 230 LRVMSLFSGIGGFEAAL------RNIGVGYELVGFSEIDKYAVKSFCAIHNVDEQLNFGD 283 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++KI + +P+ D+L+ G PCQ FS AG Sbjct: 284 VSKIDKKKLPEFDILVGGSPCQSFSVAG 311 >gi|291543181|emb|CBL16291.1| Site-specific DNA methylase [Ruminococcus bromii L2-63] Length = 149 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ D+F GIGG R LE EC EI+ Y+ + Y+A + L F D KI Sbjct: 3 IRYFDMFAGIGGFRSGLEAI---GGFECVGYCEIDKYAKQAYEAMYDTGGELYFDDARKI 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +PD D+L+ GFPCQ FS AG Sbjct: 60 VLEQLPDFDLLVGGFPCQSFSIAG 83 >gi|323968851|gb|EGB64187.1| DNA-cytosine methyltransferase [Escherichia coli TA007] Length = 282 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 7/56 (12%) Query: 31 FSSEINPYSVKTYQAN---FPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 FSSE + ++ KTY AN FP+ GDI KI +DIPDH++L+ GFPC FSQAG Sbjct: 1 FSSEWDKFAQKTYHANYGDFPD----GDITKIDEKDIPDHEILVGGFPCVAFSQAG 52 >gi|2599488|gb|AAB84141.1| FauI DNA methyltransferase [Flavobacterium aquatile] Length = 343 Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFN----HRNVECF---FSSEINPYSVKTYQANFPNTLIFG 54 LK+ LFCG GG+ + ++ F H + F ++ + + Y+ K Y NF + Sbjct: 10 LKVASLFCGCGGMDVGIQGDFKFLKKHYDTLPFKVVYAVDNDAYATKIYNDNFAHKCETK 69 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFS 80 D+ I ++PDHD+LL GFPCQ FS Sbjct: 70 DVRDIVPSEVPDHDILLGGFPCQSFS 95 >gi|127459|sp|P15446|MTH2_HAEPA RecName: Full=Modification methylase HpaII; Short=M.HpaII; AltName: Full=Cytosine-specific methyltransferase HpaII gi|43630|emb|CAA35705.1| unnamed protein product [Haemophilus parainfluenzae] gi|305377|gb|AAA20481.1| HpaII modification methyltransferase [Haemophilus parainfluenzae] Length = 358 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF GIGG R+ ++ +C FSSE + + KTY+ANF + L +GDI +T+ I Sbjct: 36 DLFAGIGGFRIAMQNL----GGKCIFSSEWDEQAQKTYEANFGD-LPYGDITLEETKAFI 90 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P+ D+L AGFPCQ FS AG Sbjct: 91 PEKFDILCAGFPCQAFSIAG 110 >gi|145638078|ref|ZP_01793692.1| putative type II 5-cytosoine methyltransferase [Haemophilus influenzae PittHH] gi|145268726|gb|EDK08715.1| putative type II 5-cytosoine methyltransferase [Haemophilus influenzae PittHH] Length = 226 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 6/82 (7%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 L + LF G GG+ L +Q FN ++++ + +V+TY+ N + GDI KI Sbjct: 6 LTVISLFSGAGGLDLGFKQAGFN-----LIWANDFDKDAVETYKENIGKECVLGDITKIP 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 + +IP+ DV++ GFPCQ FS A Sbjct: 61 SSEIPNADVMIGGFPCQGFSMA 82 >gi|295110825|emb|CBL24778.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162] Length = 311 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF G GG+ L L Q N E ++++I+ +V TY+ N + ++ DI I Sbjct: 1 MKIISLFSGAGGLDLGLIQAGN----EVIWANDIDKDAVATYRENIGDHIVCDDIKNINI 56 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 D+P+ DV++ GFPCQ FS A Sbjct: 57 YDLPEADVVVGGFPCQGFSLA 77 >gi|325912423|ref|ZP_08174818.1| modification methylase HhaI [Lactobacillus iners UPII 143-D] gi|325475765|gb|EGC78936.1| modification methylase HhaI [Lactobacillus iners UPII 143-D] Length = 314 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%) Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +C +SSE + Y+ +TY+ NF + + GDI +I ++IPDHD+L AGFPCQ FS +G Sbjct: 13 QCVYSSEWDKYAQETYKMNFGD-VPEGDITQIDEKNIPDHDILCAGFPCQAFSISG 67 >gi|48243617|gb|AAT40769.1| putative DNA methylase [Haemophilus influenzae] Length = 293 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 6/82 (7%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 L + LF G GG+ L +Q FN ++++ + +V+TY+ N + GDI KI Sbjct: 5 LTVISLFSGAGGLDLGFKQAGFN-----LIWANDFDKDAVETYKENIGKECVLGDITKIP 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 + +IP+ DV++ GFPCQ FS A Sbjct: 60 SSEIPNADVMIGGFPCQGFSMA 81 >gi|228472108|ref|ZP_04056874.1| cytosine-specific methyltransferase NlaX [Capnocytophaga gingivalis ATCC 33624] gi|228276311|gb|EEK15035.1| cytosine-specific methyltransferase NlaX [Capnocytophaga gingivalis ATCC 33624] Length = 367 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI DLF GIGG L ++ ++ E +FS EI+ ++ Y+ NFP+ GDI ++ Sbjct: 1 MKIIDLFSGIGGFALGFQRA-GYQFTEHYFS-EIDKQAIANYKYNFPHAKYIGDITTLQP 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DI D++ G PCQ FS AG Sbjct: 59 ADIAGADIITFGSPCQDFSLAG 80 >gi|166368611|ref|YP_001660884.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] gi|166090984|dbj|BAG05692.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] Length = 464 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 12/87 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDIA 57 + DLF GIGG R+ LE+ C SEI+ +++ YQ NF N + FGD++ Sbjct: 33 RFIDLFAGIGGFRIALEKLGGR----CLGYSEIDKQAIQVYQQNFISYLNSNEIAFGDVS 88 Query: 58 KIKTQDIPDH-DVLLAGFPCQPFSQAG 83 KI ++PD+ D ++ G PCQP+S AG Sbjct: 89 KI--SNLPDNLDFIVGGVPCQPWSVAG 113 >gi|57506196|ref|ZP_00372116.1| C-5 cytosine-specific DNA methylase [Campylobacter upsaliensis RM3195] gi|57015523|gb|EAL52317.1| C-5 cytosine-specific DNA methylase [Campylobacter upsaliensis RM3195] Length = 315 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF GIGGI L F + ++ E++ + TY+AN + +I D+AK+ Sbjct: 1 MKIGSLFAGIGGIELG----FKKAGFKTAWAVELDSKACITYKANHKHKIINNDLAKVDL 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + + D+L AGFPCQ FS AG Sbjct: 57 KSLSKIDILTAGFPCQAFSVAG 78 >gi|326567273|gb|EGE17393.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 12P80B1] gi|326568220|gb|EGE18302.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC8] Length = 354 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFN-------HRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 LK+ LF G GG+ L FN + E F+++I + +TYQ NF + +I Sbjct: 22 LKVISLFSGCGGMDLGFIGNFNSLGNFYPKQPFEIIFANDIFEKACQTYQHNFNHNIICQ 81 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI+ I DIP D+++ GFPCQ FS AG Sbjct: 82 DISTIDDGDIPKADIVIGGFPCQDFSLAG 110 >gi|332879681|ref|ZP_08447373.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682372|gb|EGJ55277.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 299 Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI DLF GIGG L ++ + E +FS EI+ +++ Y+ NFPN GDI I+ Sbjct: 1 MKIIDLFSGIGGFSLGFQRA-GYNFTEHYFS-EIDKHAIANYKYNFPNAKHIGDITTIQP 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ D++ G PC FS AG Sbjct: 59 ANLAGADIITFGSPCVDFSVAG 80 >gi|326566077|gb|EGE16234.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC1] Length = 354 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFN-------HRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 LK+ LF G GG+ L FN + E F+++I + +TYQ NF + +I Sbjct: 22 LKVISLFSGCGGMDLGFIGDFNSLGNFYPKQPFEIIFANDIFEKACQTYQHNFNHNIICQ 81 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI+ I DIP D+++ GFPCQ FS AG Sbjct: 82 DISTIDDTDIPKADIVIGGFPCQDFSLAG 110 >gi|326559503|gb|EGE09926.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 7169] Length = 354 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFN-------HRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 LK+ LF G GG+ L FN + E F+++I + +TYQ NF + +I Sbjct: 22 LKVISLFSGCGGMDLGFIGNFNSLGNFYPKQPFEIIFANDIFEKACQTYQHNFNHNIICQ 81 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI+ I DIP D+++ GFPCQ FS AG Sbjct: 82 DISTIDDGDIPKADIVIGGFPCQDFSLAG 110 >gi|326563801|gb|EGE14052.1| type II DNA modification enzyme [Moraxella catarrhalis 46P47B1] gi|326566814|gb|EGE16953.1| type II DNA modification enzyme [Moraxella catarrhalis 103P14B1] gi|326576727|gb|EGE26634.1| type II DNA modification enzyme [Moraxella catarrhalis 101P30B1] Length = 327 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D GIG RL LE + C SEI+ S TYQ F + GD+ ++ + Sbjct: 3 LKFMDFCSGIGAGRLGLENA----GMCCVAHSEIDLNSDLTYQLFFNDYSNLGDLTQLNS 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+PD DV+LAGFPCQ FS G Sbjct: 59 DDLPDFDVMLAGFPCQTFSIVG 80 >gi|326567346|gb|EGE17461.1| type II DNA modification enzyme [Moraxella catarrhalis BC1] Length = 327 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D GIG RL LE + C SEI+ S TYQ F + GD+ ++ + Sbjct: 3 LKFMDFCSGIGAGRLGLENA----GMCCVAHSEIDLNSDLTYQLFFNDYSNLGDLTQLNS 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+PD DV+LAGFPCQ FS G Sbjct: 59 DDLPDFDVMLAGFPCQTFSIVG 80 >gi|268611036|ref|ZP_06144763.1| prophage LambdaSa2, type II DNA modification methyltransferase, putative [Ruminococcus flavefaciens FD-1] Length = 425 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAK 58 M++ D+F GIGG R LE+ EC EI+ ++ + Y+A + + + + D K Sbjct: 1 MIRYLDMFAGIGGFRSGLERV---GGFECVGYCEIDKFAKQAYEALYDTSKEVYYDDATK 57 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I +D+PD D++ GFPCQ FS AG Sbjct: 58 IVPEDLPDIDLICGGFPCQSFSIAG 82 >gi|306828113|ref|ZP_07461376.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pyogenes ATCC 10782] gi|304429650|gb|EFM32696.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pyogenes ATCC 10782] Length = 214 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 10/87 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNV----ECFFSSEINPYSVKTYQANFPNTLIFGDI 56 MLK+ + F GIG R+ L RN+ E +EI+ +++K+Y+A GDI Sbjct: 3 MLKVFEAFAGIGTQRMAL------RNIGIPHEVVAIAEIDKFAIKSYEAIHGPVNNLGDI 56 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +KI DIPDHD+ FPCQ S AG Sbjct: 57 SKINPDDIPDHDLFTYSFPCQDISVAG 83 >gi|159026722|emb|CAO89036.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 455 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 12/87 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDIA 57 + DLF GIGG R+ LE+ C SEI+ +++ YQ NF + + FGD++ Sbjct: 25 RFVDLFAGIGGFRIALEKLGGR----CLGYSEIDKQAIQVYQQNFISYLNSDEIAFGDVS 80 Query: 58 KIKTQDIPDH-DVLLAGFPCQPFSQAG 83 KI ++PD+ D+++ G PCQP+S AG Sbjct: 81 KI--SNLPDNLDLIVGGVPCQPWSVAG 105 >gi|265751236|ref|ZP_06087299.1| DcmB protein [Bacteroides sp. 3_1_33FAA] gi|270294601|ref|ZP_06200803.1| DNA-cytosine methyltransferase [Bacteroides sp. D20] gi|263238132|gb|EEZ23582.1| DcmB protein [Bacteroides sp. 3_1_33FAA] gi|270276068|gb|EFA21928.1| DNA-cytosine methyltransferase [Bacteroides sp. D20] Length = 466 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ F G GG+ L EQ E +++E + KTYQ N PNT L DI K+K Sbjct: 1 MKVASFFAGCGGLDLGFEQA----GYEVVWANEFDEAIHKTYQFNHPNTYLCKSDIRKLK 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +DIPD D + G PCQ +S+ G Sbjct: 57 GEDIPDCDGFIGGPPCQSWSEGG 79 >gi|254282099|ref|ZP_04957067.1| modification methylase SsoII [gamma proteobacterium NOR51-B] gi|219678302|gb|EED34651.1| modification methylase SsoII [gamma proteobacterium NOR51-B] Length = 356 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 40/94 (42%), Positives = 49/94 (52%), Gaps = 20/94 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY---QANFPNTLIFGDIAK 58 K DLF GIGG RL LE R+V F+SE + + + Y ++P FGDI K Sbjct: 28 FKFIDLFAGIGGFRLGLEAQ-GGRSV---FASEWDKTAKEYYFRNHGDYP----FGDINK 79 Query: 59 IK---------TQDIPDHDVLLAGFPCQPFSQAG 83 Q +PDHD+L GFPCQPFS AG Sbjct: 80 FTGEHLSDEQVDQLVPDHDLLAGGFPCQPFSIAG 113 >gi|167751358|ref|ZP_02423485.1| hypothetical protein EUBSIR_02344 [Eubacterium siraeum DSM 15702] gi|167655604|gb|EDR99733.1| hypothetical protein EUBSIR_02344 [Eubacterium siraeum DSM 15702] Length = 316 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 + I LF GIGGI L EQ ++++IN + KTY+ NFPN ++ DI + Sbjct: 1 MTIGSLFAGIGGIDLGFEQA----GFRAIWANDINKNACKTYRYNFPNVNLYECDIRSLD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + DVL AGFPCQPFS G Sbjct: 57 PSILQPVDVLTAGFPCQPFSVCG 79 >gi|84497092|ref|ZP_00995914.1| cytosine-specific DNA methylase [Janibacter sp. HTCC2649] gi|84381980|gb|EAP97862.1| cytosine-specific DNA methylase [Janibacter sp. HTCC2649] Length = 499 Score = 60.5 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 15/89 (16%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ--- 62 DLF GIGG +H C + SEI+ + +TY N+ + L + T Sbjct: 39 DLFAGIGG----FHAMLDHAGGRCVYVSEIDREARQTYVRNWVDPLPTAQQPIVNTDITI 94 Query: 63 --------DIPDHDVLLAGFPCQPFSQAG 83 D+P+HDVL AGFPCQPFS++G Sbjct: 95 ATPDDAPVDVPNHDVLAAGFPCQPFSKSG 123 >gi|256819720|ref|YP_003140999.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271] gi|256581303|gb|ACU92438.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271] Length = 389 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DLF GIGG L ++ H F SEI+ +++ Y+ NFPN GDI + Sbjct: 1 MKLIDLFSGIGGFSLGFQRAGYHFTEHYF--SEIDKHAIANYKNNFPNAKYIGDITTLHG 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D D++ G PCQ FS AG Sbjct: 59 GDFTGIDIITFGSPCQDFSLAG 80 >gi|219122422|ref|XP_002181544.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406820|gb|EEC46758.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 495 Score = 60.5 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 5/76 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 +LF GIGG + LE EC F SEI+ Y NF GDI +++ +D P Sbjct: 145 ELFAGIGGFGVALESLGG----ECVFCSEIDEVCRTVYALNFSTKNQHGDIYEVRDRDFP 200 Query: 66 DH-DVLLAGFPCQPFS 80 D+L+ GFPCQPFS Sbjct: 201 SQLDLLVGGFPCQPFS 216 >gi|309378580|emb|CBX22758.1| DNA cytosine methyltransferase M.NlaIV [Neisseria lactamica Y92-1009] Length = 380 Score = 60.5 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 25/44 (56%), Positives = 34/44 (77%) Query: 40 VKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ + N+P+ + +GDI KI+T DIPD D+LLAGFPCQ FS AG Sbjct: 1 MEVLKQNYPDEVPYGDIPKIETGDIPDFDILLAGFPCQAFSFAG 44 >gi|187778292|ref|ZP_02994765.1| hypothetical protein CLOSPO_01884 [Clostridium sporogenes ATCC 15579] gi|187771917|gb|EDU35719.1| hypothetical protein CLOSPO_01884 [Clostridium sporogenes ATCC 15579] Length = 355 Score = 60.5 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K D+FCGIG +R+ EQ + EC +S E + + K Y F GDI K + Sbjct: 1 MKFIDMFCGIGTVRMGFEQAGH----ECVYSIEWDKWKRKIYSIIFGGEPEGGDITKCRA 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++P D G PCQ FS AG Sbjct: 57 NELPKSDCWCFGAPCQDFSVAG 78 >gi|239625135|ref|ZP_04668166.1| EaeI methyltransferase alpha subunit [Clostridiales bacterium 1_7_47_FAA] gi|239519365|gb|EEQ59231.1| EaeI methyltransferase alpha subunit [Clostridiales bacterium 1_7_47FAA] Length = 301 Score = 60.1 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ F GIGGI L LE++ +E + EI + K + ++PN + DI K+ Sbjct: 1 MRAASFFSGIGGIDLGLEKS----GIEIVYQCEILSFGQKVLKKHWPNIPLSQDITKLTG 56 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 +DIPD ++ GFPCQ S A Sbjct: 57 KDIPDAEIFAGGFPCQDLSLA 77 >gi|167854713|ref|ZP_02477492.1| cell division protein MukB [Haemophilus parasuis 29755] gi|167854127|gb|EDS25362.1| cell division protein MukB [Haemophilus parasuis 29755] Length = 361 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF GIGG RL +E+ + C FSSEI+ + KTY NF +GDI +T+ I Sbjct: 41 DLFAGIGGFRLAMEKLGGY----CVFSSEIDENAQKTYATNFGEKP-YGDITLEETKRLI 95 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P D+L AGFPCQ FS AG Sbjct: 96 PTTFDILCAGFPCQAFSIAG 115 >gi|298504551|gb|ADI83274.1| DNA cytosine methyltransferase [Geobacter sulfurreducens KN400] Length = 428 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ DLFCG GG+ L + NH + +++ N Y+ +TY NF N + GDI +I + Sbjct: 36 RVIDLFCGAGGMTLGFTKFTNHVFTPVW-ANDFNAYAARTYNRNFGNHCVVGDIVEILER 94 Query: 63 D---IPDHDVLLAGFPCQPFS 80 IP DV++ G PCQ FS Sbjct: 95 PETVIPKADVVIGGPPCQGFS 115 >gi|225076313|ref|ZP_03719512.1| hypothetical protein NEIFLAOT_01354 [Neisseria flavescens NRL30031/H210] gi|224952437|gb|EEG33646.1| hypothetical protein NEIFLAOT_01354 [Neisseria flavescens NRL30031/H210] Length = 359 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF GIGG R+ ++ +C FSSE + + +TY ANF + FGDI +T+ I Sbjct: 41 DLFAGIGGFRIAMQSL----GGKCLFSSEWDDKAQQTYAANF-GEIPFGDITTEETKSHI 95 Query: 65 P-DHDVLLAGFPCQPFSQAG 83 P + D+L AGFPCQ FS AG Sbjct: 96 PKEFDILCAGFPCQAFSIAG 115 >gi|82752078|ref|YP_417819.1| DNA modification methylase [Staphylococcus aureus RF122] gi|82657609|emb|CAI82057.1| DNA modification methylase [Staphylococcus aureus RF122] Length = 402 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 4/78 (5%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIP 65 F G+GGI L QT R V +++E + + TY+ NF N +L DI +KT +IP Sbjct: 18 FFSGVGGIELGFHQTNKFRVV---YANEFDKNAQITYENNFNNVSLDCRDIHDVKTSEIP 74 Query: 66 DHDVLLAGFPCQPFSQAG 83 DV++ GFPCQ FS AG Sbjct: 75 MSDVIVGGFPCQAFSIAG 92 >gi|332710136|ref|ZP_08430089.1| DNA-methyltransferase [Lyngbya majuscula 3L] gi|332351094|gb|EGJ30681.1| DNA-methyltransferase [Lyngbya majuscula 3L] Length = 370 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 L T LF G GG+ + E F H +S++I+ +SVKT + N P + DI ++ Sbjct: 3 LSFTSLFSGAGGLDIGFEMAGFQH-----LYSTDIDTWSVKTLRNNRPEWDVEEADIREL 57 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +D+PD DV+LAG PCQ FS G Sbjct: 58 SERDLPDSDVILAGVPCQGFSLGG 81 >gi|41019146|sp|P09389|MTBB_BPSPB RecName: Full=Modification methylase SPBetaI; Short=M.SPBetaI; AltName: Full=Cytosine-specific methyltransferase SPBetaI Length = 257 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 37/88 (42%), Positives = 48/88 (54%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV----ECFFSSEINPYSVKTYQA--NFPNTLIFGD 55 L++ LF GIG L RN+ E SEI+ Y++K+Y A N TL GD Sbjct: 4 LRVMSLFSGIGAFEAAL------RNIGVDYELIGFSEIDKYAIKSYCAIHNVSETLNVGD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I+K K +IP D+L +GFPC FS AG Sbjct: 58 ISKAKKDNIPYFDLLTSGFPCPTFSVAG 85 >gi|208289|gb|AAA72678.1| Mtase protein (ttg start codon) [synthetic construct] Length = 474 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 37/88 (42%), Positives = 48/88 (54%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV----ECFFSSEINPYSVKTYQA--NFPNTLIFGD 55 L++ LF GIG L RN+ E SEI+ Y++K+Y A N TL GD Sbjct: 4 LRVMSLFSGIGAFEAAL------RNIGVDYELIGFSEIDKYAIKSYCAIHNVSETLNVGD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I+K K +IP D+L +GFPC FS AG Sbjct: 58 ISKAKKDNIPYFDLLTSGFPCPTFSVAG 85 >gi|9630267|ref|NP_046694.1| modification methylase [Bacillus phage SPBc2] gi|16079084|ref|NP_389907.1| SP-beta prophage DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. subtilis str. 168] gi|221309931|ref|ZP_03591778.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis str. 168] gi|221314254|ref|ZP_03596059.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319176|ref|ZP_03600470.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis str. JH642] gi|221323451|ref|ZP_03604745.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis str. SMY] gi|56405062|sp|P68585|MTBP_BACSU RecName: Full=Phi-3T prophage-derived modification methylase Phi3TI; Short=M.Phi3TI; AltName: Full=Cytosine-specific methyltransferase Phi3TI gi|56405063|sp|P68586|MTBP_BPPHT RecName: Full=Modification methylase Phi3TI; Short=M.Phi3TI; AltName: Full=Cytosine-specific methyltransferase Phi3TI gi|7433506|pir||T12906 modification methylase - Bacillus subtilis phage SPBc2 gi|215471|gb|AAA32352.1| methyltransferase (ttg start codon) [Bacillus phage phi3T] gi|2634418|emb|CAB13917.1| putative SP-beta prophage DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. subtilis str. 168] gi|3025620|gb|AAC13115.1| modification methylase [Bacillus phage SPbeta] Length = 443 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 37/88 (42%), Positives = 48/88 (54%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV----ECFFSSEINPYSVKTYQA--NFPNTLIFGD 55 L++ LF GIG L RN+ E SEI+ Y++K+Y A N TL GD Sbjct: 4 LRVMSLFSGIGAFEAAL------RNIGVDYELIGFSEIDKYAIKSYCAIHNVSETLNVGD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I+K K +IP D+L +GFPC FS AG Sbjct: 58 ISKAKKDNIPYFDLLTSGFPCPTFSVAG 85 >gi|315446158|ref|YP_004079037.1| DNA-methyltransferase Dcm [Mycobacterium sp. Spyr1] gi|315264461|gb|ADU01203.1| DNA-methyltransferase Dcm [Mycobacterium sp. Spyr1] Length = 365 Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 LK+ DLF G GG + F + + FS E+N ++ TY ANF IF GDI + Sbjct: 5 LKLIDLFAGCGG----MTAGFKPQGFDPVFSVELNLHAAATYAANFGEDHIFWGDIDEAL 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++P+ DV++ G PCQ FS G Sbjct: 61 KGEVPEADVVIGGPPCQGFSNLG 83 >gi|332881189|ref|ZP_08448845.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680863|gb|EGJ53804.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 367 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI DLF GIGG L ++ +++ E +FS EI+ +++ Y+ NFPN GDI I+ Sbjct: 1 MKIIDLFSGIGGFSLGFQRA-SYQFTEHYFS-EIDKHAIANYKYNFPNAKHIGDITTIQP 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ D++ G PC FS AG Sbjct: 59 ANLAGADIITFGSPCVDFSVAG 80 >gi|218900598|ref|YP_002449009.1| modification methylase HaeIII [Bacillus cereus G9842] gi|218544695|gb|ACK97089.1| modification methylase HaeIII [Bacillus cereus G9842] Length = 313 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++K+ LF G GG+ L Q + E +++++ + +TY+ N N ++ D+ ++ Sbjct: 3 IMKVISLFSGAGGMDLGFIQAGH----EIIWANDLYEDAAETYKKNIGNHIVLKDLKEVD 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 T +IPD D+++ GFPCQ FS A Sbjct: 59 TNNIPDGDIVIGGFPCQGFSVA 80 >gi|237742049|ref|ZP_04572530.1| modification methylase HpaII [Fusobacterium sp. 4_1_13] gi|229429697|gb|EEO39909.1| modification methylase HpaII [Fusobacterium sp. 4_1_13] Length = 385 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 9/85 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----K 58 K DLF GIGGIR E T N+ S+EI+ Y+ +TY+ F N F D++ K Sbjct: 8 KTIDLFSGIGGIRKGFELTGFFENI---ISAEIDKYACETYKHLF-NENPFNDVSSEEFK 63 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 IK + + ++D+LLAGFPCQ FS AG Sbjct: 64 IKLESL-EYDILLAGFPCQSFSIAG 87 >gi|1171045|sp|P09915|MTBR_BPRH1 RecName: Full=Modification methylase Rho11sI; Short=M.Rho11sI; AltName: Full=Bsu P11s; AltName: Full=Cytosine-specific methyltransferase Rho11sI gi|579194|emb|CAA28869.1| unnamed protein product [Bacillus phage rho11s] Length = 503 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV----ECFFSSEINPYSVKTYQA--NFPNTLIFGD 55 L++ LF GIG L RN+ E SEI+ Y++K+Y A N L FGD Sbjct: 4 LRVMSLFSGIGAFEAAL------RNIGVEYELVGFSEIDKYAIKSYCAIHNADEQLNFGD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++KI + +P+ D+L+ G PCQ FS AG Sbjct: 58 VSKIDKKKLPEFDLLVGGSPCQSFSVAG 85 >gi|329769727|ref|ZP_08261128.1| hypothetical protein HMPREF0433_00892 [Gemella sanguinis M325] gi|328838089|gb|EGF87707.1| hypothetical protein HMPREF0433_00892 [Gemella sanguinis M325] Length = 406 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 6/83 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 + F G+GGI L E+T R V +++EI+ + TY+ NFPN + DI ++K + Sbjct: 12 VAAFFSGVGGIELGFEKTNKFRVV---YANEIDKNARITYKLNFPNVFLDPRDIHEVKPE 68 Query: 63 DIPDH--DVLLAGFPCQPFSQAG 83 +I + DV++ GFPCQ FS AG Sbjct: 69 EIKEEKLDVIVGGFPCQAFSIAG 91 >gi|313667088|gb|ADR72987.1| M2.BsmFI [Geobacillus stearothermophilus] Length = 365 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 4/80 (5%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF G GG+ L F + ++ +I+ +V TY+ N + +I GDI KI+ +D Sbjct: 5 VVSLFSGGGGLDLG----FKNSGFNIIWAIDIDKDAVSTYKENLGDHIILGDITKIQEKD 60 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 IP DV++ G PCQ FS G Sbjct: 61 IPKADVVIGGPPCQSFSLVG 80 >gi|261326799|emb|CBH09772.1| cytosine-specific DNA methylase, putative [Trypanosoma brucei gambiense DAL972] Length = 621 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 21/96 (21%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------------FPNTL 51 ++LF GIG R+ LE+ +C F+ E P++ Y AN P T Sbjct: 229 SELFAGIGMFRVGLERIGG----KCVFAVECAPHARSVYHANHHLPRRSSCGNEALPATR 284 Query: 52 ----IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + GDI + + P HDVL AGFPCQ F++AG Sbjct: 285 RPVPLVGDITTVPSHYFPHHDVLTAGFPCQSFAKAG 320 >gi|194017229|ref|ZP_03055841.1| site-specific DNA-methyltransferase [Bacillus pumilus ATCC 7061] gi|194011097|gb|EDW20667.1| site-specific DNA-methyltransferase [Bacillus pumilus ATCC 7061] Length = 327 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K +LF GIGGI L E +E E PY K NFPN +F D+ + Sbjct: 1 MKSIELFAGIGGIALAAEWA----GIETVAFCEREPYCQKLLNQNFPNVPVFDDVRTLNR 56 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 Q + D D++ GFPCQP+S AG Sbjct: 57 QLLEDKGVIEPNGTIDIISGGFPCQPYSSAG 87 >gi|127431|sp|P00476|MTBS_BPSPR RecName: Full=Modification methylase SPRI; Short=M.SPRI; AltName: Full=Cytosine-specific methyltransferase SPRI gi|224091|prf||1010250A methyltransferase Length = 439 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV----ECFFSSEINPYSVKTYQA--NFPNTLIFGD 55 L++ LF GIG L RN+ E SEI+ Y+VK++ A N L FGD Sbjct: 4 LRVMSLFSGIGAFEAAL------RNIGVGYELVGFSEIDKYAVKSFCAIHNVDEQLNFGD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++KI + +P+ D+L+ G PCQ FS AG Sbjct: 58 VSKIDKKKLPEFDLLVGGSPCQSFSVAG 85 >gi|216171|gb|AAA32604.1| DNA methyltransferase [Bacillus phage SPR] Length = 439 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV----ECFFSSEINPYSVKTYQA--NFPNTLIFGD 55 L++ LF GIG L RN+ E SEI+ Y+VK++ A N L FGD Sbjct: 4 LRVMSLFSGIGAFEAAL------RNIGVGYELVGFSEIDKYAVKSFCAIHNVDEQLNFGD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++KI + +P+ D+L+ G PCQ FS AG Sbjct: 58 VSKIDKKKLPEFDLLVGGSPCQSFSVAG 85 >gi|9622224|gb|AAF89681.1| cytosine-specific methyltransferase [Bacillus sp. LU11] Length = 365 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF G GG+ L F + ++ +I+ +V TY+ N + +I GDI KI+ +D Sbjct: 5 VVSLFSGGGGLDLG----FKNSGFNIIWAIDIDKDAVLTYKENLGDHIILGDITKIQEKD 60 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 IP+ DV++ G PCQ FS G Sbjct: 61 IPEADVVIGGPPCQSFSLVG 80 >gi|160939012|ref|ZP_02086363.1| hypothetical protein CLOBOL_03906 [Clostridium bolteae ATCC BAA-613] gi|158437975|gb|EDP15735.1| hypothetical protein CLOBOL_03906 [Clostridium bolteae ATCC BAA-613] Length = 168 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ D FCG GG+ + F + E + + + Y+V++Y+AN + + DI ++ Sbjct: 5 LKVNDFFCGCGGMGI----AFKNAGYEIAGAWDFDKYAVESYRANVGDHVQKADIKELHQ 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIP DV GFPCQ S AG Sbjct: 61 ADIPQADVWAFGFPCQDLSVAG 82 >gi|90408525|ref|ZP_01216682.1| DNA-methyltransferase (cytosine-specific) [Psychromonas sp. CNPT3] gi|90310344|gb|EAS38472.1| DNA-methyltransferase (cytosine-specific) [Psychromonas sp. CNPT3] Length = 380 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 20/101 (19%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRN-VECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 K+ LF G+GG+ L + FN + + +++E++ ++KTY+ NF + +I GDI KI Sbjct: 4 KVGSLFAGVGGVCLGFKSAFNEKGGYQLIWANELDEQAIKTYRCNFEHNMIPGDIEKIVK 63 Query: 60 ----------------KTQDIPDH-DVLLAGFPCQPFSQAG 83 K Q + DVL AGFPCQ FS AG Sbjct: 64 PERAKADGEEALFAQKKMQMLAQPIDVLTAGFPCQAFSIAG 104 >gi|311064356|ref|YP_003971081.1| cytosine methyl transferase Dcm [Bifidobacterium bifidum PRL2010] gi|310866675|gb|ADP36044.1| Dcm Cytosine methyl transferase [Bifidobacterium bifidum PRL2010] Length = 326 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 4/80 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ LF G GG+ L F + ++++ + +V+TY+AN + + DI+++ Sbjct: 14 RVVSLFSGAGGLDLG----FKLAGFQLAWANDFDKDAVETYRANIDDHCVCADISEVSDH 69 Query: 63 DIPDHDVLLAGFPCQPFSQA 82 DIPD D+++ GFPCQ FS A Sbjct: 70 DIPDCDIMIGGFPCQGFSMA 89 >gi|220903553|ref|YP_002478865.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867852|gb|ACL48187.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 308 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L F +++++ +VKTY+ N + ++ DI+++ T Sbjct: 1 MKVVSLFSGAGGLDLG----FKMAGHSIIWANDVYEDAVKTYRMNIGDHILCKDISQVTT 56 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 ++PD D+++ GFPCQ FS A Sbjct: 57 AEVPDSDIIIGGFPCQGFSVA 77 >gi|25011412|ref|NP_735807.1| hypothetical protein gbs1370 [Streptococcus agalactiae NEM316] gi|24412950|emb|CAD47029.1| unknown [Streptococcus agalactiae NEM316] Length = 450 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 +K DLF GIGG RL LE + EC EI+ ++ K+Y+A F + F DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGLES----QGHECLGFCEIDKFARKSYKAIFETEGEVEFHDIRQV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 57 TDQDFRKFRGQVDIICVGFPCQAFSLAG 84 >gi|257870038|ref|ZP_05649691.1| DNA methylase [Enterococcus gallinarum EG2] gi|257804202|gb|EEV33024.1| DNA methylase [Enterococcus gallinarum EG2] Length = 401 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 4/81 (4%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + F G+GGI L EQT R V +++E + + TY N+P T L DI ++ ++ Sbjct: 15 VAAFFSGVGGIELGFEQTGKFRVV---YANEFDKNAQITYAENYPQTPLDKRDIHEVDSK 71 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 ++P D+++ GFPCQ FS AG Sbjct: 72 EVPVSDLIVGGFPCQAFSIAG 92 >gi|317056067|ref|YP_004104534.1| DNA-cytosine methyltransferase [Ruminococcus albus 7] gi|315448336|gb|ADU21900.1| DNA-cytosine methyltransferase [Ruminococcus albus 7] Length = 425 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAK 58 M+K D+F GIGG R LE+ EC E + ++ + Y+A + L F D K Sbjct: 1 MIKFFDIFAGIGGFRSGLEKVGGF---ECVGYCECDKFAKQAYEALYDTRKELYFDDARK 57 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I +++PD D++ GFPCQ FS AG Sbjct: 58 IDPEELPDIDLICGGFPCQSFSIAG 82 >gi|331027909|ref|YP_004421459.1| DNA methylase [Synechococcus phage S-CBS2] gi|294805522|gb|ADF42361.1| DNA methylase [Synechococcus phage S-CBS2] Length = 286 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 24/54 (44%), Positives = 35/54 (64%) Query: 30 FFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +F+SEI+ Y+++ Q N+PNT G I +K + +P D+L G PCQ FS AG Sbjct: 27 YFASEIDKYAIQVTQKNYPNTKQIGSITDVKGEYLPKIDLLFGGSPCQSFSNAG 80 >gi|332162719|ref|YP_004299296.1| Cytosine-specific methyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666949|gb|ADZ43593.1| Cytosine-specific methyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859459|emb|CBX69803.1| hypothetical protein YEW_FM23370 [Yersinia enterocolitica W22703] Length = 365 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 7/88 (7%) Query: 3 KITDLFCGIGGIRLD-------LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 K+ LF G GG+ L L + + E +++E NP +VKTY+ NF + ++ GD Sbjct: 61 KLISLFSGCGGMDLGFCGDFSVLNKKYKKTKFEIIWANEFNPNAVKTYKKNFSHNIVEGD 120 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I ++ + DVL+ GFPCQ S G Sbjct: 121 IWELIDSVPTECDVLIGGFPCQDISING 148 >gi|169823657|ref|YP_001691160.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328] gi|167832277|dbj|BAG09192.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328] Length = 332 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 6/83 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKT 61 K+ LF G+GGI + E+ E +++EI+ + +TY+ NFP + DI ++ Sbjct: 4 KVISLFAGVGGIDIGFEKA----GFETIYANEIDEKARQTYKLNFPEVFLDSRDIRDVQK 59 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 DIP + V+++GFPCQ FS AG Sbjct: 60 DDIPHEASVVVSGFPCQSFSIAG 82 >gi|322514130|ref|ZP_08067198.1| modification methylase NgoPII [Actinobacillus ureae ATCC 25976] gi|322120016|gb|EFX92002.1| modification methylase NgoPII [Actinobacillus ureae ATCC 25976] Length = 356 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LFCG GG+ L E+ E ++E + T++AN P T LI GDI IK Sbjct: 1 MKVISLFCGCGGLDLGFEKA----GFEVPVANEYDKTIWATFKANHPKTRLIEGDIRNIK 56 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 +D PD D ++ G PCQ +S+AG Sbjct: 57 EEDFPDEIDGIIGGPPCQSWSEAG 80 >gi|78778049|ref|YP_394364.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM 1251] gi|78498589|gb|ABB45129.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM 1251] Length = 435 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------ 54 ++ +LF G+GG RL LE+T +++ +S++ P S KT A+ FG Sbjct: 26 IRTVELFAGVGGFRLGLEKTSLENKSYSVVWSNQWEP-STKTQHASDIYCARFGYENHSN 84 Query: 55 -DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI+ + IPDHD+L+ GFPCQ +S A Sbjct: 85 DDISTVDASVIPDHDLLVGGFPCQDYSVA 113 >gi|238793797|ref|ZP_04637418.1| Cytosine-specific methyltransferase [Yersinia intermedia ATCC 29909] gi|238726861|gb|EEQ18394.1| Cytosine-specific methyltransferase [Yersinia intermedia ATCC 29909] Length = 365 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 7/88 (7%) Query: 3 KITDLFCGIGGIRLD-------LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 K+ LF G GG+ L L + + E +++E NP +VKTY+ NF + ++ GD Sbjct: 61 KLISLFSGCGGMDLGFCGNFSFLNKEYKKTKFEIIWANEFNPNAVKTYKKNFSHNIVEGD 120 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I ++ + DVL+ GFPCQ S G Sbjct: 121 IWELIDSVPTECDVLIGGFPCQDISING 148 >gi|326560963|gb|EGE11328.1| type II DNA modification enzyme [Moraxella catarrhalis 7169] gi|326575187|gb|EGE25115.1| type II DNA modification enzyme [Moraxella catarrhalis CO72] Length = 322 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 5/77 (6%) Query: 8 FC-GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 FC GIG RL LE + C SEI+ S TYQ F + GD+ ++ + D+PD Sbjct: 3 FCSGIGAGRLGLENA----GMCCVAHSEIDLNSDLTYQLFFNDYSNLGDLTQLNSDDLPD 58 Query: 67 HDVLLAGFPCQPFSQAG 83 DV+LAGFPCQ FS G Sbjct: 59 FDVMLAGFPCQTFSIVG 75 >gi|291525029|emb|CBK90616.1| DNA-methyltransferase (dcm) [Eubacterium rectale DSM 17629] Length = 337 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ D FCG GG+ + F + E + + + Y+V++Y+AN + + DI ++ Sbjct: 5 LKVNDFFCGCGGMGI----AFKNAGYEIAGAWDFDKYAVESYRANVGDHVQKADIKELHQ 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIP DV GFPCQ S AG Sbjct: 61 ADIPQADVWAFGFPCQDLSVAG 82 >gi|239625877|ref|ZP_04668908.1| methyltransferase [Clostridiales bacterium 1_7_47_FAA] gi|239520107|gb|EEQ59973.1| methyltransferase [Clostridiales bacterium 1_7_47FAA] Length = 338 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ D FCG GG+ + F + E + + + Y+V++Y+AN + + DI ++ Sbjct: 5 LKVNDFFCGCGGMGI----AFKNAGYEIAGAWDFDKYAVESYRANVGDHVQKADIKELHQ 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIP DV GFPCQ S AG Sbjct: 61 ADIPQADVWAFGFPCQDLSVAG 82 >gi|311977229|gb|ADQ20489.1| M.AspCNI [Acinetobacter sp. 1690] Length = 327 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 4/79 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF G GG+ L Q + ++++IN ++ KTY N + ++ GDI +I Sbjct: 4 LTAISLFSGCGGMDLGFVQA----GFDVLWANDINGFACKTYAHNIGDHIVHGDITEIDY 59 Query: 62 QDIPDHDVLLAGFPCQPFS 80 Q IP D+++ GFPCQ FS Sbjct: 60 QSIPTADIIIGGFPCQDFS 78 >gi|309389435|gb|ADO77315.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228] Length = 328 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 38/90 (42%), Positives = 46/90 (51%), Gaps = 11/90 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKI 59 ML DLF G GG+ E+ E FS E NP +TY+ NFP N LI DIA I Sbjct: 1 MLNYIDLFSGAGGMSCGFEKA----GFENIFSLEFNPEFAETYKKNFPKNNLIVKDIADI 56 Query: 60 KTQDIP------DHDVLLAGFPCQPFSQAG 83 ++ D DV++ G PCQ FS AG Sbjct: 57 SEPEVKKIIGETDVDVIVGGPPCQGFSLAG 86 >gi|219870523|ref|YP_002474898.1| Type II modification methyltransferase HpaII/DNA (cytosine-5-)-methyltransferase [Haemophilus parasuis SH0165] gi|219690727|gb|ACL31950.1| Type II modification methyltransferase HpaII/DNA (cytosine-5-)-methyltransferase [Haemophilus parasuis SH0165] Length = 350 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI- 64 DLF G GG RL +E+ + C FSSEI+ + KTY NF +GDI +T+ + Sbjct: 30 DLFAGFGGFRLAMEKLGGY----CVFSSEIDENAQKTYATNFGEKP-YGDITLEETKRLI 84 Query: 65 -PDHDVLLAGFPCQPFSQAG 83 D+L AGFPCQ FS AG Sbjct: 85 PTTFDILCAGFPCQAFSIAG 104 >gi|320108256|ref|YP_004183846.1| DNA-cytosine methyltransferase [Terriglobus saanensis SP1PR4] gi|319926777|gb|ADV83852.1| DNA-cytosine methyltransferase [Terriglobus saanensis SP1PR4] Length = 347 Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 4/80 (5%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF GIGGI L E+ R V + EINPY + NFP+ + DI + + Sbjct: 6 VGSLFAGIGGIDLGFERA-GFRTV---WQVEINPYCQRVLAKNFPHAERYADIRECGAHN 61 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 + DV++ GFPCQ S AG Sbjct: 62 LKPVDVIVGGFPCQDISNAG 81 >gi|125974805|ref|YP_001038715.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC 27405] gi|125715030|gb|ABN53522.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC 27405] Length = 334 Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 4/80 (5%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF G GG+ + LE + ++++I+ + TY+ ++ GDIAKI D Sbjct: 17 VASLFAGAGGLDMGLELA----GFKTVWANDIDKDACATYRLWSQADVVQGDIAKIDYSD 72 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +PD DV+ GFPCQ FS AG Sbjct: 73 VPDTDVITGGFPCQGFSLAG 92 >gi|72386611|ref|XP_843730.1| cytosine-specific DNA methylase [Trypanosoma brucei TREU927] gi|62175408|gb|AAX69550.1| cytosine-specific DNA methylase, putative [Trypanosoma brucei] gi|70800262|gb|AAZ10171.1| cytosine-specific DNA methylase, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 621 Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 21/96 (21%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------------FPNTL 51 ++LF G+G R+ LE+ +C F+ E P++ Y AN P T Sbjct: 229 SELFAGMGMFRVGLERIGG----KCVFAVECAPHARSVYHANHHLPRRNSCGNEALPATR 284 Query: 52 ----IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + GDI + + P HDVL AGFPCQ F++AG Sbjct: 285 RPVPLVGDITTVPSHYFPHHDVLTAGFPCQSFAKAG 320 >gi|216165|gb|AAA32601.1| methyltransferase (ttg start codon) [Bacillus phage SPbeta] Length = 143 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/88 (42%), Positives = 48/88 (54%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV----ECFFSSEINPYSVKTYQA--NFPNTLIFGD 55 L++ LF GIG L RN+ E SEI+ Y++K+Y A N TL GD Sbjct: 4 LRVMSLFSGIGAFEAAL------RNIGVDYELIGFSEIDKYAIKSYCAIHNVSETLNVGD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I+K K +IP D+L +GFPC FS AG Sbjct: 58 ISKAKKDNIPYFDLLTSGFPCPTFSVAG 85 >gi|291087089|ref|ZP_06345376.2| modification methylase HpaII [Clostridium sp. M62/1] gi|291076158|gb|EFE13522.1| modification methylase HpaII [Clostridium sp. M62/1] Length = 490 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 17/90 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DL GIGGIR E + NV S+EI+ Y+ +TY+ +FGD A+ Sbjct: 20 MRTIDLCSGIGGIRRGFELAGDFENV---LSAEIDKYACQTYEH------LFGDDARNDV 70 Query: 62 QD--------IPDHDVLLAGFPCQPFSQAG 83 + D+DVLLAGFPCQPFS+ G Sbjct: 71 TNDEFRKLVCRTDYDVLLAGFPCQPFSKIG 100 >gi|319779704|ref|YP_004130617.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9] gi|317109728|gb|ADU92474.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9] Length = 339 Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 5/76 (6%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 +DLF G+GG R+ F +C FS E N ++ +TY NF L + DI I + Sbjct: 15 SDLFAGMGGFRV----AFESLGAKCVFSCENNTFAKETYWINF-KELTYDDIYTIPMDIV 69 Query: 65 PDHDVLLAGFPCQPFS 80 PDHD++ AGFP + S Sbjct: 70 PDHDIMCAGFPPETIS 85 >gi|49476998|ref|YP_035184.1| modification methylase HpaII (cytosine-specific methyltransferase HpaII) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328554|gb|AAT59200.1| modification methylase HpaII (Cytosine-specific methyltransferase HpaII) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 373 Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 7/84 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAKI 59 K DLF GIGGIR E T NV S+EI+ Y+ +TY+ + P + K Sbjct: 4 KTLDLFAGIGGIRRGFELTGRFENV---LSAEIDQYACQTYEHLYSENPKNDVTSAEFKE 60 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K + + +DVLL GFPCQ FS AG Sbjct: 61 KVEKL-TYDVLLGGFPCQAFSTAG 83 >gi|229131851|ref|ZP_04260720.1| Modification methylase Sau3AI [Bacillus cereus BDRD-ST196] gi|228651598|gb|EEL07564.1| Modification methylase Sau3AI [Bacillus cereus BDRD-ST196] Length = 427 Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N + + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NENFDVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ Q+IP+HD+L+ GFPCQ +S A Sbjct: 58 KDIAE-AWQEIPEHDLLVGGFPCQDYSVA 85 >gi|17228429|ref|NP_484977.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] gi|17130280|dbj|BAB72891.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] Length = 477 Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K F G G+ L E+ +E + E++ Y +T AN P+ + GDIA Sbjct: 73 VKAISFFSGAMGLDLGFEKA----GIEILLACEVDKYCRQTIVANKPDIALLGDIAAYSA 128 Query: 62 QDIPDH--------DVLLAGFPCQPFSQAG 83 QDI DH D++L G PCQ FS AG Sbjct: 129 QDILDHANLAKEDVDIMLGGPPCQAFSTAG 158 >gi|302870498|ref|YP_003839135.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC 27029] gi|302573357|gb|ADL49559.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC 27029] Length = 383 Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 4/74 (5%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 +F G GG+ L EQT + V ++++I P++V+TY+ N ++ DIA++ D+P Sbjct: 13 MFSGCGGMDLGAEQT---KRVGVVWANDIEPWAVETYRRNLGRHIVAEDIAELDVPDVP- 68 Query: 67 HDVLLAGFPCQPFS 80 D+LLAG PCQ +S Sbjct: 69 CDILLAGPPCQDYS 82 >gi|325298663|ref|YP_004258580.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] gi|324318216|gb|ADY36107.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] Length = 463 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 +K+ F G GG+ L EQ +E ++++I +TYQ N PNT++ DI ++ Sbjct: 1 MKVASFFSGCGGLDLGFEQA----GIEVIWANDIEASIHETYQYNHPNTILCKSDIRELH 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD D + G PCQ +S+ G Sbjct: 57 ASDIPDCDGFIGGPPCQSWSEGG 79 >gi|119512301|ref|ZP_01631388.1| DNA modification methylase [Nodularia spumigena CCY9414] gi|119463081|gb|EAW44031.1| DNA modification methylase [Nodularia spumigena CCY9414] Length = 502 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 8/80 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKIKTQD 63 DLF GIGG ++ L H SEIN ++KTY NF + GDI KIK + Sbjct: 10 DLFAGIGGFKMALSNNGGH----SLGFSEINQDAIKTYCDNFQIEPSYNLGDITKIK--E 63 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P HD+L AG PCQ +S AG Sbjct: 64 LPPHDLLTAGVPCQSWSIAG 83 >gi|325298704|ref|YP_004258621.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] gi|324318257|gb|ADY36148.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] Length = 399 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 36/92 (39%), Positives = 45/92 (48%), Gaps = 12/92 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHR-------NVECFFSSEINPYSVKTYQANFPNT-----L 51 I LF G GG+ L F R N E F+++ + + Y AN T Sbjct: 5 IASLFSGCGGLDLGFTGGFTFRGQFYDRLNTEILFANDFDQDAQSCYNANPLLTNNGANC 64 Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + DI I +IPD D+LLAGFPCQPFS AG Sbjct: 65 LLADIRDIDANEIPDFDILLAGFPCQPFSNAG 96 >gi|228919775|ref|ZP_04083134.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839862|gb|EEM85144.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 442 Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 16 MVKVVELFAGVGGFRLGLEA---NENFEIIWGNQWEPLTKAQHAFNCYATQFENKGIHEN 72 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA++ + IP+HD+L+ GFPCQ +S A Sbjct: 73 KDIAEVWPE-IPEHDLLVGGFPCQDYSVA 100 >gi|229195244|ref|ZP_04322018.1| Modification methylase Sau3AI [Bacillus cereus m1293] gi|228588270|gb|EEK46314.1| Modification methylase Sau3AI [Bacillus cereus m1293] Length = 442 Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 16 MVKVVELFAGVGGFRLGLEA---NENFEIIWGNQWEPLTKAQHAFNCYATQFENKGIHEN 72 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA++ + IP+HD+L+ GFPCQ +S A Sbjct: 73 KDIAEVWPE-IPEHDLLVGGFPCQDYSVA 100 >gi|157311258|ref|YP_001469302.1| gp69 [Mycobacterium phage Tweety] gi|148540887|gb|ABQ86138.1| gp69 [Mycobacterium phage Tweety] Length = 261 Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF G GG+ + +EQ F R V + E+NP + K +P GDI + Sbjct: 1 MKIGSLFSGAGGLDIAVEQFFGARTV---WHCELNPAAAKVLAHRWPGVPNLGDITAVDW 57 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + D+L GFPCQ S AG Sbjct: 58 STVEPVDILAGGFPCQDVSAAG 79 >gi|294673665|ref|YP_003574281.1| prophage PRU01 DNA methylase, C-5 cytosine-specific family [Prevotella ruminicola 23] gi|294471747|gb|ADE81136.1| prophage PRU01, DNA methylase, C-5 cytosine-specific family [Prevotella ruminicola 23] Length = 330 Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF G GG+ L E+ E ++E +P +T++AN P T LI GDI IK Sbjct: 1 MKVISLFSGCGGLDLGFERA----GFEVPVANEFDPSIWETFEANHPKTKLIRGDIRNIK 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 D P D D ++ G PCQ +S+AG Sbjct: 57 ESDFPKDVDGIIGGPPCQSWSEAG 80 >gi|171911440|ref|ZP_02926910.1| DNA-cytosine methyltransferase [Verrucomicrobium spinosum DSM 4136] Length = 292 Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 4/77 (5%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGG L E+ +C +S EINP + FP++ F D+ + ++ Sbjct: 18 LFAGIGGFELGFERA----GFQCSWSVEINPINRAVLADRFPHSRQFEDVRECGAHNLSP 73 Query: 67 HDVLLAGFPCQPFSQAG 83 DVL AGFPCQ S AG Sbjct: 74 VDVLTAGFPCQDISAAG 90 >gi|301020988|ref|ZP_07185039.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1] gi|3660493|emb|CAA57706.1| M.EcoHK31I alpha polypeptide [Escherichia coli] gi|300398362|gb|EFJ81900.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1] Length = 309 Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 4/80 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K++ F GIGG L LE+ +E F EIN + K + N+ + DI ++ Sbjct: 10 KVSSFFAGIGGFDLGLEKA----GMEVVFQCEINKFCQKVLRKNWSKVPLHTDITRLNAD 65 Query: 63 DIPDHDVLLAGFPCQPFSQA 82 +IP+ +V GFPCQ S A Sbjct: 66 EIPESNVWCGGFPCQDVSSA 85 >gi|328553026|gb|AEB23518.1| SP-beta prophage DNA (cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens TA208] Length = 503 Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV----ECFFSSEINPYSVKTYQA--NFPNTLIFGD 55 L++ LF GIG L RN+ E SEI+ Y++K+Y A N FGD Sbjct: 4 LRVMSLFSGIGAFEAAL------RNIGVEYELVGFSEIDKYAIKSYCAIHNVDEQSNFGD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++KI + +P+ D+L+ G PCQ FS AG Sbjct: 58 VSKIDKKKLPEFDLLVGGSPCQSFSVAG 85 >gi|239999928|ref|ZP_04719852.1| NgoIM [Neisseria gonorrhoeae 35/02] gi|240116859|ref|ZP_04730921.1| NgoIM [Neisseria gonorrhoeae PID1] gi|240127204|ref|ZP_04739865.1| NgoIM [Neisseria gonorrhoeae SK-93-1035] Length = 278 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 1/41 (2%) Query: 43 YQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 Y+ANF FGDI I DIPDHD+LLAGFPCQPFS AG Sbjct: 2 YEANF-GEKPFGDINGIDPSDIPDHDILLAGFPCQPFSIAG 41 >gi|262038316|ref|ZP_06011702.1| modification methylase spri [Leptotrichia goodfellowii F0264] gi|261747667|gb|EEY35120.1| modification methylase spri [Leptotrichia goodfellowii F0264] Length = 318 Score = 57.4 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 5/77 (6%) Query: 8 FC-GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 FC GIGG RL E+ C EI+ + KTYQ + + +GD+ K+ +++PD Sbjct: 8 FCSGIGGGRLGFEKN----GFICVGHCEIDEKADKTYQLFYNDGRNYGDLMKVNPKELPD 63 Query: 67 HDVLLAGFPCQPFSQAG 83 + L+AGFPCQ FS G Sbjct: 64 FNYLIAGFPCQTFSIVG 80 >gi|322411818|gb|EFY02726.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 451 Score = 57.4 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL L ++ EC EI+ +++K+Y+A + + F DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGL----TNQGHECIGFCEIDKFAMKSYKAIYETEGEIEFHDIRQV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 57 TDQDFKQLRGQVDIICGGFPCQAFSLAG 84 >gi|125974232|ref|YP_001038142.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC 27405] gi|125714457|gb|ABN52949.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC 27405] Length = 483 Score = 57.4 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 6/80 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIKTQD 63 D F GIGG RL LE H+ C E + ++VK+Y+A F D+ K+K++D Sbjct: 5 DFFAGIGGFRLGLELA-GHK---CIGFCEKDKFAVKSYRAMFDTEGEWYADDVTKLKSED 60 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 IP D+ GFPCQ S AG Sbjct: 61 IPYADIWCFGFPCQDISVAG 80 >gi|329767116|ref|ZP_08258644.1| hypothetical protein HMPREF0428_00341 [Gemella haemolysans M341] gi|328837841|gb|EGF87466.1| hypothetical protein HMPREF0428_00341 [Gemella haemolysans M341] Length = 396 Score = 57.0 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 6/80 (7%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDIP 65 F G+GGI L E+T R V +++EI+ + TY+ NFP+ + DI ++K ++I Sbjct: 5 FFSGVGGIELGFEKTNKFRVV---YANEIDKNARITYKLNFPDVFLDPRDIHEVKPEEIK 61 Query: 66 DH--DVLLAGFPCQPFSQAG 83 + DV++ GFPCQ FS AG Sbjct: 62 EEKLDVIVGGFPCQAFSIAG 81 >gi|261364680|ref|ZP_05977563.1| modification methylase Eco47II [Neisseria mucosa ATCC 25996] gi|288566964|gb|EFC88524.1| modification methylase Eco47II [Neisseria mucosa ATCC 25996] Length = 419 Score = 57.0 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 6/85 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 + K+ +LF G GG+ + +EQ E +EI+ + KT + N PN ++ GDIAK+ Sbjct: 75 LYKLLELFAGAGGLAIGMEQA----GFESVLLNEIDAAACKTLRKNRPNWNVVEGDIAKL 130 Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83 D D+L GFPCQ FS AG Sbjct: 131 DFTPYRDQIDILSGGFPCQAFSYAG 155 >gi|261252209|ref|ZP_05944782.1| DNA-cytosine methyltransferase [Vibrio orientalis CIP 102891] gi|260935600|gb|EEX91589.1| DNA-cytosine methyltransferase [Vibrio orientalis CIP 102891] Length = 584 Score = 57.0 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 51/112 (45%), Gaps = 38/112 (33%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLI------ 52 DLF GIGG+R + F +C F+SE + + +TY AN P L Sbjct: 99 DLFAGIGGLR----RGFEDIGGKCRFTSEWDDKARRTYLANHYVDKDELPYFLDESTENP 154 Query: 53 -----FGDIAKIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 F DI KI + IP+HDVLLAGFPCQPFS AG Sbjct: 155 MKNRDFMDITKITLSGESSVSEKEKLNHIRKHIPEHDVLLAGFPCQPFSLAG 206 >gi|116627564|ref|YP_820183.1| site-specific DNA methylase [Streptococcus thermophilus LMD-9] gi|116100841|gb|ABJ65987.1| Site-specific DNA methylase [Streptococcus thermophilus LMD-9] Length = 406 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG+ L F + ++++ +V+TY+ N N ++ GDI KI + Sbjct: 4 LNLLSLFSGAGGMDL----GFKNAGFNILWANDFQKDAVETYKNNIGNHIVLGDITKIDS 59 Query: 62 QDIP--DHDVLLAGFPCQPFSQA 82 +IP D DV++ GFPCQ FS A Sbjct: 60 SEIPGTDIDVVIGGFPCQGFSIA 82 >gi|328912201|gb|AEB63797.1| Modification methylase Rho11sI [Bacillus amyloliquefaciens LL3] Length = 503 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV----ECFFSSEINPYSVKTYQA--NFPNTLIFGD 55 L++ LF GIG L RN+ E SEI+ Y++K+Y A N L +GD Sbjct: 4 LRVMSLFSGIGAFEAAL------RNIGVEYELVGFSEIDKYAIKSYCAIHNVDEQLNYGD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++KI +P+ D+L+ G PCQ FS AG Sbjct: 58 VSKIDKTFLPEFDLLVGGSPCQSFSVAG 85 >gi|261379604|ref|ZP_05984177.1| modification methylase EcoRII [Neisseria subflava NJ9703] gi|284798084|gb|EFC53431.1| modification methylase EcoRII [Neisseria subflava NJ9703] Length = 320 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF GIGG L++ +C F+SE + + KTY+ N N GDI K + +D I Sbjct: 10 DLFAGIGGFHFALKEL----RGKCVFASEWDKNAQKTYEVNH-NLKPLGDITKQEIKDQI 64 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P+ D+L AGFPCQ FS AG Sbjct: 65 PEKFDILCAGFPCQAFSIAG 84 >gi|149190453|ref|ZP_01868724.1| DNA-cytosine methyltransferase [Vibrio shilonii AK1] gi|148835707|gb|EDL52673.1| DNA-cytosine methyltransferase [Vibrio shilonii AK1] Length = 373 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K+ F GIGG L E+ +E F E+N + K + ++P+ + DI + Sbjct: 81 FKVASFFAGIGGFDLGCERA----GMEVVFQCEVNSFCQKVLKKHWPSIPLHSDIKTLSA 136 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 DIPD ++ GFPCQ S A Sbjct: 137 SDIPDANIWCGGFPCQDVSLA 157 >gi|293371777|ref|ZP_06618187.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f] gi|292633229|gb|EFF51800.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f] Length = 459 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ F G GG+ L EQ E +++E + +TYQ N PNT L DI +K Sbjct: 1 MKVASFFAGCGGLDLGFEQA----GYEVIWANEFDEGIHETYQFNHPNTYLCKSDIRTLK 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD D + G PCQ +S+ G Sbjct: 57 AADIPDCDGFIGGPPCQSWSEGG 79 >gi|219871000|ref|YP_002475375.1| cytosine specific DNA methyltransferase (BSP6IM) [Haemophilus parasuis SH0165] gi|219691204|gb|ACL32427.1| cytosine specific DNA methyltransferase (BSP6IM) [Haemophilus parasuis SH0165] Length = 295 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/57 (49%), Positives = 36/57 (63%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++C SEI+P TYQ F + GD+ +I Q +PD DV+LAGFPCQ FS AG Sbjct: 1 MQCVGHSEIDPEPDTTYQIFFNDRNNLGDLTQIDIQKLPDFDVMLAGFPCQTFSIAG 57 >gi|320156908|ref|YP_004189287.1| DNA-cytosine methyltransferase [Vibrio vulnificus MO6-24/O] gi|319932220|gb|ADV87084.1| DNA-cytosine methyltransferase [Vibrio vulnificus MO6-24/O] Length = 552 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 38/112 (33%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----------FPNT----- 50 DLF GIGG+R + F + +C F+SE + + +TY AN F N+ Sbjct: 102 DLFAGIGGLR----KGFENVGGKCVFTSEWDEKARRTYLANHYVDESELPYFLNSEQDDG 157 Query: 51 ---LIFGDIAKIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 F DI +I + IP HDVLLAGFPCQPFS AG Sbjct: 158 MKNTNFMDITQITLSGDPEATELQQQASILKHIPKHDVLLAGFPCQPFSLAG 209 >gi|197303495|ref|ZP_03168534.1| hypothetical protein RUMLAC_02217 [Ruminococcus lactaris ATCC 29176] gi|197297493|gb|EDY32054.1| hypothetical protein RUMLAC_02217 [Ruminococcus lactaris ATCC 29176] Length = 496 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIA 57 + K DL GIGGIR E T NV S+EI+PY+ TY+ F P + + Sbjct: 2 IYKTIDLCAGIGGIRRGFEMTGLFENV---LSAEIDPYAALTYKHLFGEDPTNDLTSEDF 58 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 K + + ++DVLLAGFPCQ FS+ G Sbjct: 59 KNEVVNT-EYDVLLAGFPCQAFSRVG 83 >gi|305666023|ref|YP_003862310.1| putative DNA modification methylase [Maribacter sp. HTCC2170] gi|88710798|gb|EAR03030.1| putative DNA modification methylase (N.MgoV) [Maribacter sp. HTCC2170] Length = 493 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 8/80 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKIKTQD 63 DLF GIGG RL L++ EC SEIN ++ Y NF + + G+I KI ++ Sbjct: 8 DLFSGIGGFRLGLQRN----GGECIGFSEINKDAIDFYCENFGDDRSENLGNITKI--EN 61 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P HD+L AG PCQ +S AG Sbjct: 62 LPQHDLLTAGVPCQSWSIAG 81 >gi|225862882|ref|YP_002748260.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102] gi|225789623|gb|ACO29840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102] Length = 360 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 12/90 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 + ++ DLFCG GGI + F E +IN +V+T+ NFP++ + DI KI Sbjct: 2 VARVIDLFCGCGGI----SEGFRLSGFEIVGGLDINEDAVETFNKNFPDSQAYCADIEKI 57 Query: 60 KTQDIP-------DHDVLLAGFPCQPFSQA 82 K DIP D DV++ G PCQ FS A Sbjct: 58 KNDDIPFMFDLLGDIDVIVGGPPCQGFSSA 87 >gi|218248203|ref|YP_002373574.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|257060473|ref|YP_003138361.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|218168681|gb|ACK67418.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|256590639|gb|ACV01526.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 460 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 12/84 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-----FGDIAKIK 60 DLF GIGG R+ L+ +C SEI+ ++K YQ NF N L FGDI +I Sbjct: 27 DLFAGIGGFRIALKSLGG----KCLGFSEIDKQAIKVYQHNFINYLTSDEREFGDITQIP 82 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 ++P + D+++ G PCQP+S AG Sbjct: 83 --NLPQNVDIIVGGVPCQPWSVAG 104 >gi|330718183|ref|ZP_08312783.1| cytosine-specific methyltransferase [Leuconostoc fallax KCTC 3537] Length = 414 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 I F G+GGI L E +R V +++E + + T++ NF + + D IK D Sbjct: 5 IVSFFAGVGGIDLGFEDAGEYRTV---YANEFDKNAQHTFETNFKSRGTYLDRRDIKQVD 61 Query: 64 I-------PDHDVLLAGFPCQPFSQAG 83 P+ VLLAGFPCQPFS AG Sbjct: 62 AKEVKAKAPNASVLLAGFPCQPFSIAG 88 >gi|254883949|ref|ZP_05256659.1| site-specific DNA methylase [Bacteroides sp. 4_3_47FAA] gi|254836742|gb|EET17051.1| site-specific DNA methylase [Bacteroides sp. 4_3_47FAA] Length = 420 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G+ ++ L++ E +++SEI+ ++++ Q NFP+T+ GD+ ++ Sbjct: 1 MKVLSLFDGMSCGQIALKRL--GIRTETYYASEIDRHAIRQTQLNFPDTIQLGDVTQVDV 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + + D+L+ G PCQ FS AG Sbjct: 59 RQLEPIDLLIGGSPCQSFSFAG 80 >gi|332970702|gb|EGK09683.1| DNA (cytosine-5-)-methyltransferase [Kingella kingae ATCC 23330] Length = 197 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%) Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80 E ++++ +PY+VK Y ANF + D+ I ++P+HD+LL GFPCQ FS Sbjct: 22 EIAYAADYDPYAVKIYNANFSHQAEIKDVRDIVAGELPEHDILLGGFPCQSFS 74 >gi|229095557|ref|ZP_04226542.1| Modification methylase Sau3AI [Bacillus cereus Rock3-29] gi|228687859|gb|EEL41752.1| Modification methylase Sau3AI [Bacillus cereus Rock3-29] Length = 427 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE ++N E + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NKNFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ ++P+HD+L+ GFPCQ +S A Sbjct: 58 RDIAE-AWPEVPEHDLLVGGFPCQDYSVA 85 >gi|206600250|ref|YP_002241856.1| gp69 [Mycobacterium phage Ramsey] gi|206287338|gb|ACI12681.1| gp69 [Mycobacterium phage Ramsey] Length = 447 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF G GG+ + +EQ F R V + E+NP + K +P GDI + Sbjct: 1 MKIGSLFSGAGGLDIAVEQFFGARTV---WHCELNPDASKVLAHRWPGVPNLGDITAVDW 57 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + D+L GFPCQ S AG Sbjct: 58 STVEPVDILAGGFPCQDVSAAG 79 >gi|328948537|ref|YP_004365874.1| DNA (cytosine-5-)-methyltransferase [Treponema succinifaciens DSM 2489] gi|328448861|gb|AEB14577.1| DNA (cytosine-5-)-methyltransferase [Treponema succinifaciens DSM 2489] Length = 129 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF G GG+ L E+ E ++E + T++ N PNT LI GDI IK Sbjct: 1 MKVISLFSGCGGLDLGFEKA----GFEIPIANEFDSSIWATFEKNHPNTKLIRGDIRNIK 56 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 +D PD D ++ G PCQ +S+AG Sbjct: 57 EEDFPDEIDGIIGGPPCQSWSEAG 80 >gi|317008995|gb|ADU79575.1| DNA-cytosine methyltransferase [Helicobacter pylori India7] Length = 309 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIGG E F E +++E++ + TY+ANF + L+ DI + Sbjct: 1 MKVGSLFAGIGG----FECAFLQAGFEIGWANELDKDACNTYRANFKHKLLEQDIKDLNP 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ D ++ AGFPCQ FS AG Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78 >gi|294083958|ref|YP_003550715.1| cytosine-specific methyltransferase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663530|gb|ADE38631.1| Cytosine-specific methyltransferase [Candidatus Puniceispirillum marinum IMCC1322] Length = 407 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 MLK DL GIGG L E + + + + + K ++P+ I D+ ++ Sbjct: 1 MLKHLDLASGIGGFSLGFEWAGLSQPI---MFCDTDEWCRKVLNKHWPDVPIVNDVKELA 57 Query: 61 TQ--DIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AG+PCQPFS AG Sbjct: 58 NEPSQIPDHDILSAGYPCQPFSVAG 82 >gi|317181696|dbj|BAJ59480.1| DNA-cytosine methyltransferase [Helicobacter pylori F57] Length = 309 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIGG E F E +++E++ + TY+ANF + L+ DI + Sbjct: 1 MKVGSLFAGIGG----FECAFLQAGFEIGWANELDKDACNTYRANFKHKLLEQDIKDLNP 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ D ++ AGFPCQ FS AG Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78 >gi|308061704|gb|ADO03592.1| DNA-cytosine methyltransferase [Helicobacter pylori Cuz20] gi|308063214|gb|ADO05101.1| DNA-cytosine methyltransferase [Helicobacter pylori Sat464] gi|317180749|dbj|BAJ58535.1| DNA-cytosine methyltransferase [Helicobacter pylori F32] Length = 309 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIGG E F E +++E++ + TY+ANF + L+ DI + Sbjct: 1 MKVGSLFAGIGG----FECAFLQAGFEIGWANELDKDACNTYRANFKHKLLEQDIKDLNP 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ D ++ AGFPCQ FS AG Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78 >gi|261839203|gb|ACX98968.1| DNA-cytosine methyltransferase [Helicobacter pylori 52] Length = 309 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIGG E F E +++E++ + TY+ANF + L+ DI + Sbjct: 1 MKVGSLFAGIGG----FECAFLQAGFEIGWANELDKDACNTYRANFKHKLLEQDIKDLNP 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ D ++ AGFPCQ FS AG Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78 >gi|224436796|ref|ZP_03657794.1| modification methylase HaeIII [Helicobacter cinaedi CCUG 18818] gi|313143285|ref|ZP_07805478.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi CCUG 18818] gi|313128316|gb|EFR45933.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi CCUG 18818] Length = 305 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L F E F+++I+ + ++YQ N N ++ DI ++ Sbjct: 4 IKVISLFSGCGGLDLG----FIKAGFEIVFANDIDKEACESYQKNIGNHIVCKDIYTLEV 59 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 ++IP+ D+L+ GFPC F+ A Sbjct: 60 EEIPNADILIGGFPCLGFTIA 80 >gi|325860528|ref|ZP_08173633.1| modification methylase HaeIII [Prevotella denticola CRIS 18C-A] gi|325481968|gb|EGC84996.1| modification methylase HaeIII [Prevotella denticola CRIS 18C-A] Length = 403 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 13/95 (13%) Query: 2 LKITDLFCGIGGIRLD-------LEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---- 50 +KI LF G GG+ L + +++ E F+++ + + Y +N T Sbjct: 5 IKIASLFSGCGGLDLGFIGGFDFMGKSYPKLPTEIVFANDFDTDAATCYNSNSLLTKNNH 64 Query: 51 --LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + DI + ++IPD+D+LLAGFPCQPFS AG Sbjct: 65 AKCLLRDIRSVNVEEIPDYDILLAGFPCQPFSNAG 99 >gi|307244197|ref|ZP_07526312.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus stomatis DSM 17678] gi|306492347|gb|EFM64385.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus stomatis DSM 17678] Length = 534 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 15/86 (17%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK---- 58 K+ LF G GG+ L +Q E ++++ + + + Y+ NF G+I K Sbjct: 197 KLVSLFSGCGGMDLGFKQA----GYEIVYANDFDSDAQRVYEKNF------GEIDKRSIL 246 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 + ++IPD D+L AGFPCQPFS AG Sbjct: 247 DVDEKEIPDCDILTAGFPCQPFSNAG 272 >gi|225375779|ref|ZP_03753000.1| hypothetical protein ROSEINA2194_01411 [Roseburia inulinivorans DSM 16841] gi|225212376|gb|EEG94730.1| hypothetical protein ROSEINA2194_01411 [Roseburia inulinivorans DSM 16841] Length = 431 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 ++ DLF GIGG R L + N C E++ Y+ K YQ F D I Sbjct: 6 IQFFDLFSGIGGFREGLRRA---GNFVCVGHCEVDTYADKNYQLLFDTEGEWYCNDARTI 62 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + + +PD D+L AGFPCQ FS AG Sbjct: 63 EPERMPDFDLLCAGFPCQAFSIAG 86 >gi|188527161|ref|YP_001909848.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi470] gi|188143401|gb|ACD47818.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi470] Length = 309 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIGG E F E +++E++ + TY+ANF + L+ DI + Sbjct: 1 MKVGSLFAGIGG----FECAFLQAGFEIDWANELDKDACNTYRANFKHKLLEQDIKDLNP 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ D ++ AGFPCQ FS AG Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78 >gi|228957327|ref|ZP_04119088.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802360|gb|EEM49216.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pakistani str. T13001] Length = 427 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ +IP+HD+L+ GFPCQ +S A Sbjct: 58 RDIAE-AWPEIPEHDLLVGGFPCQDYSVA 85 >gi|229078249|ref|ZP_04210814.1| Modification methylase Sau3AI [Bacillus cereus Rock4-2] gi|228705049|gb|EEL57470.1| Modification methylase Sau3AI [Bacillus cereus Rock4-2] Length = 427 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ +IP+HD+L+ GFPCQ +S A Sbjct: 58 RDIAE-AWPEIPEHDLLVGGFPCQDYSVA 85 >gi|229101666|ref|ZP_04232385.1| Modification methylase Sau3AI [Bacillus cereus Rock3-28] gi|228681735|gb|EEL35893.1| Modification methylase Sau3AI [Bacillus cereus Rock3-28] Length = 427 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ +IP+HD+L+ GFPCQ +S A Sbjct: 58 RDIAE-AWPEIPEHDLLVGGFPCQDYSVA 85 >gi|229108527|ref|ZP_04238142.1| Modification methylase Sau3AI [Bacillus cereus Rock1-15] gi|228674934|gb|EEL30163.1| Modification methylase Sau3AI [Bacillus cereus Rock1-15] Length = 427 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ +IP+HD+L+ GFPCQ +S A Sbjct: 58 RDIAE-AWPEIPEHDLLVGGFPCQDYSVA 85 >gi|229171704|ref|ZP_04299279.1| Modification methylase Sau3AI [Bacillus cereus MM3] gi|228611850|gb|EEK69097.1| Modification methylase Sau3AI [Bacillus cereus MM3] Length = 430 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ +IP+HD+L+ GFPCQ +S A Sbjct: 58 RDIAE-AWPEIPEHDLLVGGFPCQDYSVA 85 >gi|325130663|gb|EGC53404.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304] gi|325134723|gb|EGC57362.1| DNA-cytosine methyltransferase [Neisseria meningitidis M13399] gi|325144843|gb|EGC67131.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240013] gi|325205668|gb|ADZ01121.1| DNA-cytosine methyltransferase [Neisseria meningitidis M04-240196] Length = 316 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 7/88 (7%) Query: 3 KITDLFCGIGGIRLD-------LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 KI LF G GG+ L L +T++ + + +++EI+ ++V+TY+ N N ++ GD Sbjct: 15 KIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHGD 74 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I + + D+++ GFPCQ S G Sbjct: 75 IWQYLDEIPTSADIIIGGFPCQDISING 102 >gi|254805366|ref|YP_003083587.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|254668908|emb|CBA07091.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|308389730|gb|ADO32050.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha710] Length = 389 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 7/88 (7%) Query: 3 KITDLFCGIGGIRLD-------LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 KI LF G GG+ L L +T++ + + +++EI+ ++V+TY+ N N ++ GD Sbjct: 88 KIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHGD 147 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I + + D+++ GFPCQ S G Sbjct: 148 IWQYLDEIPTSADIIIGGFPCQDISING 175 >gi|332361316|gb|EGJ39120.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus sanguinis SK1056] Length = 454 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG R+ LE + EC EI+ ++ K+YQA + + DI ++ Sbjct: 4 MKFLDLFAGIGGFRMGLES----QGHECIGYCEIDKFARKSYQAIYDTEGEIELHDIRQV 59 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 60 TDQDFRQLRGQVDIICGGFPCQAFSLAG 87 >gi|319745928|gb|EFV98213.1| type II DNA modification methyltransferase [Streptococcus agalactiae ATCC 13813] Length = 454 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL L ++ EC EI+ ++ K+Y+A + + F DI ++ Sbjct: 4 MKFLDLFAGIGGFRLGL----TNQGHECIGFCEIDKFARKSYKAIYETEGEIEFHDIRQV 59 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 60 TDQDFKQLRGQVDIICGGFPCQAFSLAG 87 >gi|157311261|ref|YP_001469305.1| gp72 [Mycobacterium phage Tweety] gi|148540890|gb|ABQ86141.1| gp72 [Mycobacterium phage Tweety] Length = 370 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++I LF G GG+ L +E+ F R V + EI+P + K +P+ FG + I Sbjct: 1 MRIGSLFSGAGGLDLAVEEVFGGRTV---WHCEIDPAASKVLAHRWPSVPNFGSVTDIDW 57 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + DVL GFPCQ S AG Sbjct: 58 STVEPVDVLCGGFPCQDLSCAG 79 >gi|296313785|ref|ZP_06863726.1| modification methylase NgoPII [Neisseria polysaccharea ATCC 43768] gi|296839714|gb|EFH23652.1| modification methylase NgoPII [Neisseria polysaccharea ATCC 43768] Length = 330 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +KI LF G GG+ L E+ E ++E + T++AN P T LI GDI IK Sbjct: 1 MKIISLFSGCGGLDLGFEKA----GFEVPVANEYDKTIWSTFKANHPKTHLIEGDIRSIK 56 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 +D PD D ++ G PCQ +S+AG Sbjct: 57 EEDFPDEIDGIIGGPPCQSWSEAG 80 >gi|154502686|ref|ZP_02039746.1| hypothetical protein RUMGNA_00499 [Ruminococcus gnavus ATCC 29149] gi|153796569|gb|EDN78989.1| hypothetical protein RUMGNA_00499 [Ruminococcus gnavus ATCC 29149] Length = 458 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 ++ DLF GIGG R L + C E++ Y+ K Y+ F D I Sbjct: 35 IRFFDLFSGIGGFREGLRRA---GGFTCVGHCEVDAYADKNYRLLFDTEGEWFCNDARTI 91 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T+ +PD D+L AGFPCQ FS AG Sbjct: 92 ETERMPDFDLLCAGFPCQAFSIAG 115 >gi|153815491|ref|ZP_01968159.1| hypothetical protein RUMTOR_01726 [Ruminococcus torques ATCC 27756] gi|145847133|gb|EDK24051.1| hypothetical protein RUMTOR_01726 [Ruminococcus torques ATCC 27756] Length = 439 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 ++ DLF GIGG R L + C E++ Y+ K Y+ F D I Sbjct: 16 IRFFDLFSGIGGFREGLRRA---GGFTCVGHCEVDAYADKNYRLLFDTEGEWFCNDARTI 72 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T+ +PD D+L AGFPCQ FS AG Sbjct: 73 ETERMPDFDLLCAGFPCQAFSIAG 96 >gi|332968936|gb|EGK07982.1| DNA-cytosine methyltransferase [Desmospora sp. 8437] Length = 379 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 ++ DLF G GG+ + + E ++++ N Y+VKTY NF N + GDI + Sbjct: 5 FRVIDLFSGAGGMSAGFSN-LSKGDFEPVWANDYNAYAVKTYNRNFDNHCVHGDIVDLLG 63 Query: 60 -KTQDIPDHDVLLAGFPCQPFS 80 T +IP D+++ G PCQ FS Sbjct: 64 DTTVEIPKADLVIGGPPCQGFS 85 >gi|288958310|ref|YP_003448651.1| DNA (cytosine-5-)-methyltransferase [Azospirillum sp. B510] gi|288910618|dbj|BAI72107.1| DNA (cytosine-5-)-methyltransferase [Azospirillum sp. B510] Length = 375 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ DLFCG GG+ L Q R V F+ + + ++ +TY+ NF + +I GDI +I++ Sbjct: 31 KLIDLFCGAGGLTLGFVQA-GFRPV---FAIDDDRHAAETYRLNFGDHIICGDIRQIES- 85 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 P DV++ G PCQ FS+ G Sbjct: 86 -FPAADVVIGGPPCQGFSRLG 105 >gi|225858823|ref|YP_002740333.1| methyl transferase [Streptococcus pneumoniae 70585] gi|225720620|gb|ACO16474.1| methyl transferase [Streptococcus pneumoniae 70585] Length = 451 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A F + + DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGMEA----QGHECLGFCEIDKFARTSYKAMFKTEEEIEYHDIKEV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 DI DV+ GFPCQ FS AG Sbjct: 57 TDHDIRQFRGQVDVICGGFPCQAFSLAG 84 >gi|293975|gb|AAB59071.1| cytosine methylase [Neisseria gonorrhoeae] Length = 341 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +KI LF G GG+ L E+ E ++E + T++AN P T LI GDI KIK Sbjct: 12 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 67 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 +D P+ D ++ G PCQ +S+AG Sbjct: 68 EEDFPEEIDGIIGGPPCQSWSEAG 91 >gi|289422787|ref|ZP_06424624.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus anaerobius 653-L] gi|289156786|gb|EFD05414.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus anaerobius 653-L] Length = 536 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI---- 56 M DLF G GG+ L QT + + + E NP +TY+ N P +FGD+ Sbjct: 1 MFNTIDLFAGAGGLSLGFMQT---KKFDIKVAYEFNPSMQETYKKNHPGVAVFGDVRDAN 57 Query: 57 -AKIKTQDIPDHDVLLAGFPCQPFSQA 82 A+IK + D DV++ G PCQ FS A Sbjct: 58 YAEIK-EKYGDIDVVIGGPPCQGFSNA 83 >gi|268604583|ref|ZP_06138750.1| cytosine methylase [Neisseria gonorrhoeae PID1] gi|268588714|gb|EEZ53390.1| cytosine methylase [Neisseria gonorrhoeae PID1] Length = 341 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +KI LF G GG+ L E+ E ++E + T++AN P T LI GDI KIK Sbjct: 12 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 67 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 +D P+ D ++ G PCQ +S+AG Sbjct: 68 EEDFPEEIDGIIGGPPCQSWSEAG 91 >gi|1399076|gb|AAB03209.1| NgoII cytosine methylase M.NgoII [Neisseria gonorrhoeae] Length = 341 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +KI LF G GG+ L E+ E ++E + T++AN P T LI GDI KIK Sbjct: 12 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 67 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 +D P+ D ++ G PCQ +S+AG Sbjct: 68 EEDFPEEIDGIIGGPPCQSWSEAG 91 >gi|59802113|ref|YP_208825.1| DcmB [Neisseria gonorrhoeae FA 1090] gi|268593822|ref|ZP_06127989.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae 35/02] gi|268597735|ref|ZP_06131902.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae FA19] gi|291042825|ref|ZP_06568566.1| site-specific DNA-methyltransferase M.NgoPII [Neisseria gonorrhoeae DGI2] gi|293398154|ref|ZP_06642359.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|44873|emb|CAA30038.1| unnamed protein product [Neisseria gonorrhoeae] gi|44888|emb|CAA36888.1| NgoPII restriction and modification [Neisseria gonorrhoeae] gi|293960|gb|AAA17019.1| cytosine methylase [Neisseria gonorrhoeae] gi|59719008|gb|AAW90413.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae FA 1090] gi|268547211|gb|EEZ42629.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae 35/02] gi|268551523|gb|EEZ46542.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae FA19] gi|291013259|gb|EFE05225.1| site-specific DNA-methyltransferase M.NgoPII [Neisseria gonorrhoeae DGI2] gi|291611417|gb|EFF40487.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|227054|prf||1613419B NgoPII methylase Length = 341 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +KI LF G GG+ L E+ E ++E + T++AN P T LI GDI KIK Sbjct: 12 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 67 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 +D P+ D ++ G PCQ +S+AG Sbjct: 68 EEDFPEEIDGIIGGPPCQSWSEAG 91 >gi|319746106|gb|EFV98380.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus agalactiae ATCC 13813] Length = 458 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL L ++ EC EI+ ++ K+Y+A + + F DI ++ Sbjct: 4 MKFLDLFAGIGGFRLGL----TNQGHECIGFCEIDKFARKSYKAIYKTEGEIEFHDIRQV 59 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 60 TDQDFRQLRGQVDIICGGFPCQAFSLAG 87 >gi|228913600|ref|ZP_04077228.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228846011|gb|EEM91034.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 427 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ ++P+HD+L+ GFPCQ +S A Sbjct: 58 RDIAE-AWPEVPEHDLLVGGFPCQDYSVA 85 >gi|228944657|ref|ZP_04107027.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228815117|gb|EEM61368.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 427 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ ++P+HD+L+ GFPCQ +S A Sbjct: 58 RDIAE-AWPEVPEHDLLVGGFPCQDYSVA 85 >gi|307152045|ref|YP_003887429.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306982273|gb|ADN14154.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 323 Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+K+ LF G GG+ L F + ++++I+ + +TY+ N + +I D+ I Sbjct: 1 MIKVISLFSGCGGMDLG----FKWAGYQIIWANDIDHDACETYKRNIGDHIIKDDVKNIN 56 Query: 61 TQDIPDHDVLLAGFPCQPFS 80 + +PD D++L GFPCQ FS Sbjct: 57 FEQLPDCDLILGGFPCQDFS 76 >gi|325132717|gb|EGC55400.1| DNA-cytosine methyltransferase [Neisseria meningitidis M6190] gi|325136737|gb|EGC59337.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579] gi|325138603|gb|EGC61162.1| DNA-cytosine methyltransferase [Neisseria meningitidis ES14902] gi|325142796|gb|EGC65168.1| DNA-cytosine methyltransferase [Neisseria meningitidis 961-5945] gi|325198710|gb|ADY94166.1| DNA-cytosine methyltransferase [Neisseria meningitidis G2136] gi|325201728|gb|ADY97182.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149] gi|325204572|gb|ADZ00026.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240355] gi|325208528|gb|ADZ03980.1| DNA-cytosine methyltransferase [Neisseria meningitidis NZ-05/33] Length = 316 Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 9/89 (10%) Query: 3 KITDLFCGIGGIRLD-------LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 KI LF G GG+ L L +T++ + + +++EI+ ++V+TY+ N N ++ GD Sbjct: 15 KIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHGD 74 Query: 56 IAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 I + +IP D+++ GFPCQ S G Sbjct: 75 IWQ-HLDEIPTSADIIIGGFPCQDISING 102 >gi|261392162|emb|CAX49670.1| putative modification methylase (cytosine-specific methyltransferase) [Neisseria meningitidis 8013] gi|309378365|emb|CBX23011.1| putative DNA cytosine methyltransferase [Neisseria lactamica Y92-1009] Length = 389 Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 9/89 (10%) Query: 3 KITDLFCGIGGIRLD-------LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 KI LF G GG+ L L +T++ + + +++EI+ ++V+TY+ N N ++ GD Sbjct: 88 KIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHGD 147 Query: 56 IAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 I + +IP D+++ GFPCQ S G Sbjct: 148 IWQ-HLDEIPTSADIIIGGFPCQDISING 175 >gi|225075681|ref|ZP_03718880.1| hypothetical protein NEIFLAOT_00697 [Neisseria flavescens NRL30031/H210] gi|224952952|gb|EEG34161.1| hypothetical protein NEIFLAOT_00697 [Neisseria flavescens NRL30031/H210] Length = 389 Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 9/89 (10%) Query: 3 KITDLFCGIGGIRLD-------LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 KI LF G GG+ L L +T++ + + +++EI+ ++V+TY+ N N ++ GD Sbjct: 88 KIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHGD 147 Query: 56 IAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 I + +IP D+++ GFPCQ S G Sbjct: 148 IWQ-HLDEIPTSADIIIGGFPCQDISING 175 >gi|121635255|ref|YP_975500.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis FAM18] gi|313668027|ref|YP_004048311.1| C-5 cytosine-specific DNA methylase [Neisseria lactamica ST-640] gi|120866961|emb|CAM10721.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis FAM18] gi|313005489|emb|CBN86924.1| C-5 cytosine-specific DNA methylase [Neisseria lactamica 020-06] Length = 383 Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 9/89 (10%) Query: 3 KITDLFCGIGGIRLD-------LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 KI LF G GG+ L L +T++ + + +++EI+ ++V+TY+ N N ++ GD Sbjct: 82 KIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHGD 141 Query: 56 IAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 I + +IP D+++ GFPCQ S G Sbjct: 142 IWQ-HLDEIPTSADIIIGGFPCQDISING 169 >gi|283797105|ref|ZP_06346258.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. M62/1] gi|291075522|gb|EFE12886.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. M62/1] Length = 535 Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML + LF GIGG L H + ++SEI P+ ++ + FP+ GDI K+ Sbjct: 1 MLTLGSLFDGIGGFPL----AGIHNGITPLWASEIEPFPIQVTKLRFPDMEHVGDITKLD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +P DV+ G PCQ S AG Sbjct: 57 GGKLPPVDVICGGSPCQDLSVAG 79 >gi|332523411|ref|ZP_08399663.1| modification methylase HpaII [Streptococcus porcinus str. Jelinkova 176] gi|332314675|gb|EGJ27660.1| modification methylase HpaII [Streptococcus porcinus str. Jelinkova 176] Length = 451 Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL L + + EC EI+ ++ K+Y+A + + F DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGLTR----QGHECIGFCEIDKFARKSYKAIYKTEGEIEFHDIRQV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 57 TDQDFRQLRGQVDIICGGFPCQAFSLAG 84 >gi|312863775|ref|ZP_07724013.1| DNA (cytosine-5-)-methyltransferase [Streptococcus vestibularis F0396] gi|311101311|gb|EFQ59516.1| DNA (cytosine-5-)-methyltransferase [Streptococcus vestibularis F0396] Length = 454 Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL L + + EC EI+ ++ K+Y+A + + F DI ++ Sbjct: 4 MKFLDLFAGIGGFRLGLTR----QGHECIGFCEIDKFARKSYKAIYKTEGEIEFHDIRQV 59 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 60 TDQDFRQLRGQVDIICGGFPCQAFSLAG 87 >gi|126660265|ref|ZP_01731380.1| putative DNA modification methylase (N.MgoV) [Cyanothece sp. CCY0110] gi|126618440|gb|EAZ89194.1| putative DNA modification methylase (N.MgoV) [Cyanothece sp. CCY0110] Length = 458 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 12/84 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDIAKIK 60 D F GIGG R+ LE+ +C SEI+ ++K YQ NF L GDI+KI Sbjct: 32 DFFAGIGGFRIPLEKL----GGKCLGYSEIDKEAIKVYQQNFISYYNSEELNLGDISKIN 87 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 + +P + D+ + G PCQP+S AG Sbjct: 88 S--LPKNVDLFVGGVPCQPWSVAG 109 >gi|146298415|ref|YP_001193006.1| DNA-cytosine methyltransferase [Flavobacterium johnsoniae UW101] gi|146152833|gb|ABQ03687.1| DNA-cytosine methyltransferase [Flavobacterium johnsoniae UW101] Length = 329 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 4/80 (5%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + L+ G+GGI L F E +++E + + TY+ NF + LI GD+ + Sbjct: 5 VGSLYAGVGGICL----GFKKAGFELEWANEFDKNACITYKNNFEHNLIEGDVMALDVTS 60 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 + ++L AGFPCQPFS AG Sbjct: 61 LKKINILTAGFPCQPFSVAG 80 >gi|901818|gb|AAA69959.1| 5C-DNA methyltransferase [Bacillus phage H2] Length = 503 Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV----ECFFSSEINPYSVKTYQA--NFPNTLIFGD 55 L++ LF GIG L RN+ E SEI+ Y++K+Y A N FGD Sbjct: 4 LRVMSLFSGIGAFEAAL------RNIGVEYELVGFSEIDKYAIKSYCAIHNVDEQSNFGD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++KI + +P+ D+L+ G PCQ FS G Sbjct: 58 VSKIDKKKLPEFDLLVGGSPCQSFSVRG 85 >gi|329960681|ref|ZP_08299024.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fluxus YIT 12057] gi|328532554|gb|EGF59348.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fluxus YIT 12057] Length = 572 Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 10/89 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54 +++ +LF G+GG R+ LE + + ++++ P S K A+ FG Sbjct: 5 IRVVELFAGVGGFRIGLEGASD--AYQTIWNNQWEP-STKRQDASLVYKARFGSKGHSNR 61 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI + T++IPDHD+L+ GFPCQ +S A Sbjct: 62 DINTVPTKEIPDHDLLVGGFPCQDYSVAA 90 >gi|319757724|gb|ADV69666.1| DNA-cytosine methyltransferase [Streptococcus suis JS14] Length = 451 Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGG RL +E + EC EI+ ++ +Y+A F NT G+I Sbjct: 1 MKFLDLFAGIGGFRLGMEA----QGHECLGFCEIDKFARTSYKAMF-NTE--GEIEYHDI 53 Query: 62 QDIPDHD---------VLLAGFPCQPFSQAG 83 +++ DHD V+ GFPCQ FS AG Sbjct: 54 KEVTDHDFRQFRGQVEVICGGFPCQAFSLAG 84 >gi|325270473|ref|ZP_08137075.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM 16608] gi|324987196|gb|EGC19177.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM 16608] Length = 365 Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 7/85 (8%) Query: 3 KITDLFCGIGGIRLD-------LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 K+ LFCG GG L L + ++ E ++ + + ++V TY NF + + D Sbjct: 7 KVASLFCGCGGSDLGIVGGFEYLGKRYDELPFEIAYAVDFDKWAVDTYNKNFRHKAVCAD 66 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFS 80 + ++ + D DVL+ GFPCQ FS Sbjct: 67 VTEVDFDETADVDVLIGGFPCQSFS 91 >gi|20094956|ref|NP_614803.1| site-specific DNA methylase [Methanopyrus kandleri AV19] gi|19888204|gb|AAM02733.1| Site-specific DNA methylase [Methanopyrus kandleri AV19] Length = 315 Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 K+ DLFCG GG + F + E NP TY+ NFP +I DI ++ + Sbjct: 4 KVVDLFCGAGG----FSRGFKEAGFKILGGVENNPAPAATYRENFPEAEVIERDIQRVDS 59 Query: 62 QDIPDH----DVLLAGFPCQPFSQA 82 ++I D DV++ G PC+PF+ A Sbjct: 60 EEIVDELGEPDVIIGGPPCEPFTAA 84 >gi|1781029|emb|CAA67412.1| orf1 [Methanopyrus kandleri] Length = 146 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 K+ DLFCG GG + F + E NP TY+ NFP +I DI ++ + Sbjct: 4 KVVDLFCGAGG----FSRGFKEAGFKILGGVENNPAPAATYRENFPEAEVIERDIQRVDS 59 Query: 62 QDIPDH----DVLLAGFPCQPFSQA 82 ++I D DV++ G PC+PF+ A Sbjct: 60 EEIVDELGEPDVIIGGPPCEPFTAA 84 >gi|328947038|ref|YP_004364375.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447362|gb|AEB13078.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 466 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT-QDI 64 DLF G+GG L +++ +C F+SE+ Y+ N+ FGDI K+ +DI Sbjct: 30 DLFAGLGGFHLAMQKL----GGKCVFASELKEDLRILYKENY-GIDCFGDINKVDIDKDI 84 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P D+L AGFPCQPFS+AG Sbjct: 85 PKKFDMLCAGFPCQPFSKAG 104 >gi|292670760|ref|ZP_06604186.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] gi|292647381|gb|EFF65353.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] Length = 476 Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF GIGG L H V ++SEI P+ +FPN FGDI +I Sbjct: 1 MTLGSLFDGIGGWLL----AARHAGVTPVWASEIEPFPCSVTARHFPNVKQFGDITQIDP 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +I D++ AG PCQ S AG Sbjct: 57 DEIDPVDIICAGSPCQDLSIAG 78 >gi|327534643|gb|AEA93477.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis OG1RF] Length = 334 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 ++ DLF GIGG RL +E +H C EI+ Y+ K+YQA + DI + Sbjct: 1 MEFLDLFAGIGGFRLGMEMAGHH----CIGFCEIDKYARKSYQAIHQTKGEIELHDITSV 56 Query: 60 KT---QDIPDHDVLLAGFPCQPFSQAG 83 Q I D+L GFPCQ FS AG Sbjct: 57 SNEFIQSIGHTDILCGGFPCQAFSIAG 83 >gi|153939897|ref|YP_001391385.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum F str. Langeland] gi|152935793|gb|ABS41291.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum F str. Langeland] gi|295319412|gb|ADF99789.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum F str. 230613] Length = 547 Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 35/86 (40%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M KI DLF G GG+ L E T E E N + KTY N N + DI K+ Sbjct: 1 MYKIVDLFAGAGGLSLGFEMT---EKFEIVAFVENNKNAAKTYLKNHSNIKNYEDILKLD 57 Query: 61 TQDI----PDHDVLLAGFPCQPFSQA 82 DI P+ DV++ G PCQ FS A Sbjct: 58 FNDILSSNPNIDVVIGGPPCQGFSNA 83 >gi|70606458|ref|YP_255328.1| site-specific DNA methylase [Sulfolobus acidocaldarius DSM 639] gi|68567106|gb|AAY80035.1| site-specific DNA methylase [Sulfolobus acidocaldarius DSM 639] Length = 319 Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +K+ DLF G GG L FN E S +IN + +TY NFPNT++ DI I Sbjct: 4 VKVIDLFSGAGGFSLG----FNREPFEIKLSVDINHAAARTYSINFPNTVVIEDDIRNIT 59 Query: 61 TQDIP-----DHDVLLAGFPCQPFSQA 82 +DI + D+++ PC+PF+ A Sbjct: 60 GRDIRYLIGGEPDIIIGSPPCEPFTGA 86 >gi|228969793|ref|ZP_04130554.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar sotto str. T04001] gi|228789920|gb|EEM37741.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar sotto str. T04001] Length = 246 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DLF GIGGI L + +E EI P++ K ++P IF DI + Sbjct: 1 MKMLDLFSGIGGISLAADWA----GIETTAFCEIEPFNQKVLNKHWPKVPIFSDIRTLTK 56 Query: 62 QDIPDHDV-------LLAGFPCQPFSQAG 83 Q + + V + GFPCQP+S AG Sbjct: 57 QSLEERGVDVGTISIVAGGFPCQPYSVAG 85 >gi|194099965|ref|YP_002003104.1| Modification methylase NgoPII [Neisseria gonorrhoeae NCCP11945] gi|239997973|ref|ZP_04717897.1| Modification methylase NgoPII [Neisseria gonorrhoeae 35/02] gi|240015049|ref|ZP_04721962.1| Modification methylase NgoPII [Neisseria gonorrhoeae DGI18] gi|240017498|ref|ZP_04724038.1| Modification methylase NgoPII [Neisseria gonorrhoeae FA6140] gi|240122118|ref|ZP_04735080.1| Modification methylase NgoPII [Neisseria gonorrhoeae PID24-1] gi|240124411|ref|ZP_04737367.1| Modification methylase NgoPII [Neisseria gonorrhoeae PID332] gi|240124717|ref|ZP_04737603.1| Modification methylase NgoPII [Neisseria gonorrhoeae SK-92-679] gi|254494673|ref|ZP_05107844.1| modification methylase HaeIII [Neisseria gonorrhoeae 1291] gi|260439589|ref|ZP_05793405.1| Modification methylase NgoPII [Neisseria gonorrhoeae DGI2] gi|268599983|ref|ZP_06134150.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae MS11] gi|268602320|ref|ZP_06136487.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae PID18] gi|268683040|ref|ZP_06149902.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae PID332] gi|268683292|ref|ZP_06150154.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae SK-92-679] gi|268687469|ref|ZP_06154331.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|462655|sp|P08455|MTP2_NEIGO RecName: Full=Modification methylase NgoPII; Short=M.NgoPII; AltName: Full=Cytosine-specific methyltransferase NgoPII gi|193935255|gb|ACF31079.1| Modification methylase NgoPII [Neisseria gonorrhoeae NCCP11945] gi|226513713|gb|EEH63058.1| modification methylase HaeIII [Neisseria gonorrhoeae 1291] gi|268584114|gb|EEZ48790.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae MS11] gi|268586451|gb|EEZ51127.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae PID18] gi|268623324|gb|EEZ55724.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae PID332] gi|268623576|gb|EEZ55976.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae SK-92-679] gi|268627753|gb|EEZ60153.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|317165417|gb|ADV08958.1| DcmB [Neisseria gonorrhoeae TCDC-NG08107] Length = 330 Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +KI LF G GG+ L E+ E ++E + T++AN P T LI GDI KIK Sbjct: 1 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 56 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 +D P+ D ++ G PCQ +S+AG Sbjct: 57 EEDFPEEIDGIIGGPPCQSWSEAG 80 >gi|323693327|ref|ZP_08107545.1| hypothetical protein HMPREF9475_02408 [Clostridium symbiosum WAL-14673] gi|323502810|gb|EGB18654.1| hypothetical protein HMPREF9475_02408 [Clostridium symbiosum WAL-14673] Length = 536 Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M DLF G GG+ L QT + + + E NP +TY+ N P +FGD+ Sbjct: 1 MFNTIDLFAGAGGLSLGFMQT---KKFDIKVAYEFNPAMQETYKKNHPGVAVFGDVRDAN 57 Query: 61 TQDIPDH----DVLLAGFPCQPFSQA 82 +I + DV++ G PCQ FS A Sbjct: 58 YAEIKEKYGNIDVVIGGPPCQGFSNA 83 >gi|269121452|ref|YP_003309629.1| DNA-cytosine methyltransferase [Sebaldella termitidis ATCC 33386] gi|268615330|gb|ACZ09698.1| DNA-cytosine methyltransferase [Sebaldella termitidis ATCC 33386] Length = 372 Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--FGDIAKI 59 +K+ +LF GIG R LE+ H V F SEI+ +++ +Y+A + L GDI KI Sbjct: 1 MKVIELFAGIGSPRKALEKLNIHHKVIAF--SEIDRFAIDSYRAIHNDFLTPNLGDIEKI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K ++P+ D+L+ G PCQ S AG Sbjct: 59 K--ELPETDLLIYGSPCQDISIAG 80 >gi|300867524|ref|ZP_07112175.1| putative Modification methylase HgiDII [Oscillatoria sp. PCC 6506] gi|300334518|emb|CBN57345.1| putative Modification methylase HgiDII [Oscillatoria sp. PCC 6506] Length = 361 Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 12/88 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 +L DLFCG GG+ E NH N+ + + NP KTY+ N PN ++ DIA + Sbjct: 18 LLTAVDLFCGCGGVT---EGLTNH-NIRVVAAVDNNPIVCKTYKINHPNVNLYESDIALL 73 Query: 60 KTQDI-------PDHDVLLAGFPCQPFS 80 DI D D+L+ PCQPFS Sbjct: 74 DPMDIRQNDLKGADVDILVVCAPCQPFS 101 >gi|153854028|ref|ZP_01995361.1| hypothetical protein DORLON_01352 [Dorea longicatena DSM 13814] gi|149753410|gb|EDM63341.1| hypothetical protein DORLON_01352 [Dorea longicatena DSM 13814] Length = 468 Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 ++ DLF GIGG R L + N C E++ Y+ K Y+ F D I Sbjct: 43 IQFFDLFSGIGGFREGLRRA---GNFVCVGHCEVDTYADKNYRLLFDTEGEWYCNDTRTI 99 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + + +PD D+L AGFPCQ FS AG Sbjct: 100 EPERMPDFDLLCAGFPCQAFSIAG 123 >gi|227536485|ref|ZP_03966534.1| site-specific DNA-methyltransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227243562|gb|EEI93577.1| site-specific DNA-methyltransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 349 Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 7/85 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTF-NHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ML+ LF GIGG D+ ++ +NV FS E +P+ + +PNT + DI Sbjct: 1 MLRHGSLFSGIGG--FDIAASWMGWQNV---FSCEKDPFCRTVLKHYWPNTAHYEDIYDF 55 Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83 + H D++ GFPCQPFSQAG Sbjct: 56 RATHFRGHIDIISGGFPCQPFSQAG 80 >gi|312874669|ref|ZP_07734692.1| modification methylase HaeIII [Lactobacillus iners LEAF 2053A-b] gi|311089796|gb|EFQ48217.1| modification methylase HaeIII [Lactobacillus iners LEAF 2053A-b] Length = 331 Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L F E ++E + KTY+ N LI GDI KI + Sbjct: 1 MKLISLFSGAGGLDLG----FKKAGYEIVAANEFDKTIWKTYEKNHATRLIKGDICKIPS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + P+ D ++ G PCQ +S+AG Sbjct: 57 DEFPECDGIIGGPPCQSWSEAG 78 >gi|302866239|ref|YP_003834876.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC 27029] gi|302569098|gb|ADL45300.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC 27029] Length = 368 Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 L + DLF G GG+ + F++ S E + + TY ANF + DI KIK Sbjct: 8 LSMIDLFAGCGGMTVG----FHNEGFRPILSVEWDRAAASTYAANFGKEHTRWEDIEKIK 63 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +IPD DV++ G PCQ FS G Sbjct: 64 DDEIPDADVIIGGPPCQGFSNLG 86 >gi|254285523|ref|ZP_04960487.1| modification methylase Eco47II [Vibrio cholerae AM-19226] gi|150424385|gb|EDN16322.1| modification methylase Eco47II [Vibrio cholerae AM-19226] Length = 417 Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 6/83 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK- 60 K+ +LF G GG+ + +EQ ++ +E++ ++ T + N P+ +I GDIAK+ Sbjct: 79 KLVELFAGGGGLAIGMEQA----GLKSILLNEMDKHACNTLRHNRPDWNVIEGDIAKVDF 134 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 TQ + DVL GFPCQ FS AG Sbjct: 135 TQIKEEVDVLTGGFPCQAFSYAG 157 >gi|7243959|gb|AAB21481.2| cytosine DNA methyltransferase homolog [Neisseria gonorrhoeae] Length = 347 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 6/80 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 17 KILSLFSGCGGLYLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 72 Query: 63 D--IPDHDVLLAGFPCQPFS 80 D IPD D++L GFPCQ FS Sbjct: 73 DPTIPDCDIILGGFPCQDFS 92 >gi|228982443|ref|ZP_04142702.1| Cytosine-specific methyltransferase [Bacillus thuringiensis Bt407] gi|228776626|gb|EEM24934.1| Cytosine-specific methyltransferase [Bacillus thuringiensis Bt407] Length = 418 Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 12/82 (14%) Query: 6 DLFCGIG----GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLFCG G G++L ++ + NPY+VKTY + DI KI Sbjct: 20 DLFCGAGVGACGVKL--------AGYHMAYAVDNNPYAVKTYNKMIGPHAVLADIRKINP 71 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD ++A C+ FS AG Sbjct: 72 NDIPDHDFMIATPVCKSFSVAG 93 >gi|322411604|gb|EFY02512.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 451 Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL L + + EC EI+ ++ K+Y+A + + F DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGLIR----QGHECIGFCEIDKFARKSYKAIYETKGEIEFHDIRQV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 57 TDQDFRQLRGQVDIICGGFPCQAFSLAG 84 >gi|256397638|ref|YP_003119202.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928] gi|256363864|gb|ACU77361.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928] Length = 389 Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 LK+ DLFCG GG E+T + E + +I P SV T+Q N L + GDI K++ Sbjct: 4 LKVMDLFCGTGGFSKGFEKT---GSFEVVYGIDILPLSVATFQLNHEAALALSGDIRKVR 60 Query: 61 TQDIPDH--------DVLLAGFPCQPFS 80 +I + DV++ G PCQ FS Sbjct: 61 RSEIAEKLNLARDEVDVIIGGPPCQGFS 88 >gi|325972432|ref|YP_004248623.1| DNA-cytosine methyltransferase [Spirochaeta sp. Buddy] gi|324027670|gb|ADY14429.1| DNA-cytosine methyltransferase [Spirochaeta sp. Buddy] Length = 402 Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 9/86 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTL-IFGDIA 57 + +LF G+GG R+ LE + + F+++ P ++ Y +F + DIA Sbjct: 7 VVELFAGVGGFRVGLEASGVWK---VAFANQWEPGKKNQWAFDCYTKHFSEGIHSNADIA 63 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 K++ +DIPDH +L+ GFPCQ +S A Sbjct: 64 KVEAKDIPDHSLLVGGFPCQDYSVAA 89 >gi|260890952|ref|ZP_05902215.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254] gi|260859505|gb|EEX74005.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254] Length = 452 Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 8/84 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ LF G GG+ L + + E ++++ +V+TY+ N N ++ GDI I ++ Sbjct: 10 KVISLFSGAGGMDLGIIKA----GFEVIWANDFEKDAVETYRRNIGNHIVLGDITMISSK 65 Query: 63 DIP----DHDVLLAGFPCQPFSQA 82 +IP + D+++ GFPCQ FS A Sbjct: 66 EIPLKKGEVDLIIGGFPCQGFSIA 89 >gi|254442311|ref|ZP_05055787.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae bacterium DG1235] gi|198256619|gb|EDY80927.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae bacterium DG1235] Length = 338 Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 6/62 (9%) Query: 28 ECFFSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81 EC SEINP + +TY+ + L GD+ KI D PD DV+L GFPCQ FS Sbjct: 29 ECVGYSEINPKAKRTYRMLHELDTLWEPQLDLGDLTKINPNDAPDFDVMLGGFPCQTFSI 88 Query: 82 AG 83 G Sbjct: 89 VG 90 >gi|303231468|ref|ZP_07318199.1| modification methylase HhaI family protein [Veillonella atypica ACS-049-V-Sch6] gi|302513905|gb|EFL55916.1| modification methylase HhaI family protein [Veillonella atypica ACS-049-V-Sch6] Length = 411 Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 6/83 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 I F G+GGI L EQT R V +++E + + TY+ NFP+ + DI + + Sbjct: 11 IAAFFSGVGGIELGFEQTNKFRVV---YANEFDKNANITYKLNFPDIQLDNRDIHIVSSS 67 Query: 63 DIPDH--DVLLAGFPCQPFSQAG 83 DI DV++ GFPCQ FS AG Sbjct: 68 DIKTEKIDVIVGGFPCQAFSIAG 90 >gi|225869346|ref|YP_002745294.1| C-5 cytosine-specific DNA methylase [Streptococcus equi subsp. zooepidemicus] gi|225702622|emb|CAX00673.1| C-5 cytosine-specific DNA methylase [Streptococcus equi subsp. zooepidemicus] Length = 451 Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL L + H+ C EI+ ++ K+Y+A + + F DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGLTRQ-GHK---CIGFCEIDKFARKSYKAIYETKGEIEFHDIRQV 56 Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 57 TDQDFRQLRGQMDIICGGFPCQAFSLAG 84 >gi|170718749|ref|YP_001783936.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] gi|168826878|gb|ACA32249.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] Length = 372 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 6/80 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 16 KILSLFSGCGGLDLGFHQA----GYETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 71 Query: 63 D--IPDHDVLLAGFPCQPFS 80 D IPD D++L GFPCQ FS Sbjct: 72 DPTIPDCDIILGGFPCQDFS 91 >gi|323127564|gb|ADX24861.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 96 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 +K DLF GIGG RL L + EC EI+ ++ K+Y+A + + F DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGL----TRQGHECIGFCEIDKFARKSYKAIYETEGEIEFHDIRQV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 57 TDQDFRQLRGQVDIICGGFPCQAFSLAG 84 >gi|59800809|ref|YP_207521.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA 1090] gi|254493277|ref|ZP_05106448.1| modification methylase NgoFVII [Neisseria gonorrhoeae 1291] gi|260440968|ref|ZP_05794784.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae DGI2] gi|268594414|ref|ZP_06128581.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae 35/02] gi|268596411|ref|ZP_06130578.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA19] gi|268598542|ref|ZP_06132709.1| modification methylase NgoFVII [Neisseria gonorrhoeae MS11] gi|268600894|ref|ZP_06135061.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID18] gi|268681681|ref|ZP_06148543.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID332] gi|268683908|ref|ZP_06150770.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-92-679] gi|291044296|ref|ZP_06570005.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae DGI2] gi|293399487|ref|ZP_06643640.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|59717704|gb|AAW89109.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA 1090] gi|226512317|gb|EEH61662.1| modification methylase NgoFVII [Neisseria gonorrhoeae 1291] gi|268547803|gb|EEZ43221.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae 35/02] gi|268550199|gb|EEZ45218.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA19] gi|268582673|gb|EEZ47349.1| modification methylase NgoFVII [Neisseria gonorrhoeae MS11] gi|268585025|gb|EEZ49701.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID18] gi|268621965|gb|EEZ54365.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID332] gi|268624192|gb|EEZ56592.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-92-679] gi|291011190|gb|EFE03186.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae DGI2] gi|291610056|gb|EFF39178.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] Length = 374 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 6/80 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 17 KILSLFSGCGGLDLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 72 Query: 63 D--IPDHDVLLAGFPCQPFS 80 D IPD D++L GFPCQ FS Sbjct: 73 DPTIPDCDIILGGFPCQDFS 92 >gi|268686152|ref|ZP_06153014.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-93-1035] gi|268626436|gb|EEZ58836.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-93-1035] Length = 374 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 6/80 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 17 KILSLFSGCGGLDLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 72 Query: 63 D--IPDHDVLLAGFPCQPFS 80 D IPD D++L GFPCQ FS Sbjct: 73 DPTIPDCDIILGGFPCQDFS 92 >gi|159037548|ref|YP_001536801.1| C-5 cytosine-specific DNA methylase [Salinispora arenicola CNS-205] gi|157916383|gb|ABV97810.1| C-5 cytosine-specific DNA methylase [Salinispora arenicola CNS-205] Length = 98 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----A 57 L + DLF GIGG+ L L++ + EINPY ++P D+ A Sbjct: 6 LHVLDLFAGIGGLSLGLQRA----GMRIVGHVEINPYCRAVLARHWPEVSCHDDVRTAAA 61 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D P DV+ G+PCQP S AG Sbjct: 62 WWRSTDRPRVDVVAGGYPCQPESLAG 87 >gi|11386930|sp|Q59606|MTF7_NEIGO RecName: Full=Modification methylase NgoFVII; Short=M.NgoFVII; AltName: Full=Cytosine-specific methyltransferase NgoFVII; Short=M.NgoVII gi|1165245|gb|AAA86270.1| M.NgoVII [Neisseria gonorrhoeae] Length = 374 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 6/80 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 17 KILSLFSGCGGLDLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 72 Query: 63 D--IPDHDVLLAGFPCQPFS 80 D IPD D++L GFPCQ FS Sbjct: 73 DPTIPDCDIILGGFPCQDFS 92 >gi|240117500|ref|ZP_04731562.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae PID1] gi|268603200|ref|ZP_06137367.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID1] gi|268587331|gb|EEZ52007.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID1] Length = 374 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 6/80 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 17 KILSLFSGCGGLDLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 72 Query: 63 D--IPDHDVLLAGFPCQPFS 80 D IPD D++L GFPCQ FS Sbjct: 73 DPTIPDCDIILGGFPCQDFS 92 >gi|332655061|ref|ZP_08420802.1| modification methylase NgoFVII (Cytosine-specificmethyltransferase NgoFVII) (M.NgoFVII) (M.NgoVII) [Ruminococcaceae bacterium D16] gi|332515921|gb|EGJ45530.1| modification methylase NgoFVII (Cytosine-specificmethyltransferase NgoFVII) (M.NgoFVII) (M.NgoVII) [Ruminococcaceae bacterium D16] Length = 369 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 7/81 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI--- 59 K+ +F G GG+ L F+ ++++ ++VK+++ANF + + + DI KI Sbjct: 12 KVVSIFSGCGGLDLG----FHMEGYNTIWANDFAEWAVKSFRANFGDVIKYEDITKINPY 67 Query: 60 KTQDIPDHDVLLAGFPCQPFS 80 + + IP+ D++L GFPCQ FS Sbjct: 68 EDKSIPECDLVLGGFPCQDFS 88 >gi|317504402|ref|ZP_07962385.1| modification methylase Sau3AI [Prevotella salivae DSM 15606] gi|315664482|gb|EFV04166.1| modification methylase Sau3AI [Prevotella salivae DSM 15606] Length = 579 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK-----TYQANFPNT-LIFGD 55 +K+ +LF G+GG R+ LE + + E ++++ P ++ Y+A F + D Sbjct: 9 IKVVELFAGVGGFRIGLEGASD--DYETIWNNQWEPSTIHQDASLVYRARFGSKGHCNED 66 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 I + T +IP+HD+L+ GFPCQ +S A Sbjct: 67 INNVDTANIPNHDLLVGGFPCQDYSVA 93 >gi|309809233|ref|ZP_07703103.1| modification methylase HaeIII [Lactobacillus iners SPIN 2503V10-D] gi|308170467|gb|EFO72490.1| modification methylase HaeIII [Lactobacillus iners SPIN 2503V10-D] Length = 340 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L F E ++E + KTY+ N LI GDI KI + Sbjct: 1 MKLISLFSGAGGLDL----GFKKAGYEIVVANEFDKTIWKTYEKNNATKLIKGDICKIPS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + P D ++ G PCQ +S+AG Sbjct: 57 DEFPKCDGIIGGPPCQSWSEAG 78 >gi|319744643|gb|EFV96990.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus agalactiae ATCC 13813] Length = 451 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGG RL LE H+ C EI+ ++ +Y+A F NT G+I Sbjct: 1 MKFLDLFAGIGGFRLGLESQ-GHK---CLGFCEIDKFARTSYKAMF-NTE--GEIEYHDI 53 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 +++ DH D++ GFPCQ FS AG Sbjct: 54 KEVTDHDFRQFRGQVDIICGGFPCQAFSLAG 84 >gi|269214273|ref|ZP_05986228.2| modification methylase NgoPII [Neisseria lactamica ATCC 23970] gi|269210330|gb|EEZ76785.1| modification methylase NgoPII [Neisseria lactamica ATCC 23970] Length = 330 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +KI LF G GG+ L E+ E ++E + T++AN P T LI GDI KIK Sbjct: 1 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 56 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 +D P+ D ++ G PCQ +S+AG Sbjct: 57 EEDFPEGIDGIIGGPPCQSWSEAG 80 >gi|319744417|gb|EFV96775.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus agalactiae ATCC 13813] Length = 450 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL L + + EC EI+ ++ K+Y+A + + F DI ++ Sbjct: 4 MKFLDLFAGIGGFRLGLTR----QGHECIGFCEIDKFARKSYKAIYETKGEIEFHDIRQV 59 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 +D D++ GFPCQ FS AG Sbjct: 60 TDEDFRQLRGQVDIICGGFPCQAFSLAG 87 >gi|254411906|ref|ZP_05025682.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196181628|gb|EDX76616.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 456 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 12/85 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDIAKI 59 DLF GIGG R+ LE+ +C SEI+ +V Y+ NF + L GDI I Sbjct: 31 VDLFAGIGGFRIPLEEL----GGKCLGYSEIDKEAVNVYKKNFISYINADELYLGDI--I 84 Query: 60 KTQDIP-DHDVLLAGFPCQPFSQAG 83 +P + D+L+ G PCQP+S AG Sbjct: 85 ALHKLPFEVDILVGGVPCQPWSIAG 109 >gi|327463103|gb|EGF09424.1| modification methylase ScrFIA [Streptococcus sanguinis SK1] Length = 346 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 7/86 (8%) Query: 2 LKITDLFCGIGGIRLD-------LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 LKI LF G GG + L+Q + +E ++++I+ + K ++ NF T Sbjct: 4 LKIASLFSGGGGTDIGFAGGFDFLDQHYADNQIEIVYANDIDDSANKMFEKNFGITPDNR 63 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFS 80 ++ ++K+ +IP D+L GFPCQ FS Sbjct: 64 NVREVKSNEIPSFDILTGGFPCQSFS 89 >gi|80159730|ref|YP_398474.1| putative DNA methylase [Clostridium phage c-st] gi|78675320|dbj|BAE47742.1| putative DNA methylase [Clostridium phage c-st] Length = 370 Score = 53.5 bits (127), Expect = 8e-06, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K D F G G R +E + EC EI + +TY+ N+ T F D+A++ Sbjct: 1 MKFIDFFSGAGMFRKGMEDAGH----ECIGYVEIQKQARETYETNYDTTKEWTFHDVAQL 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 K +DIP+ D+ GFPC+ S A Sbjct: 57 KAEDIPNADIWCFGFPCKNMSTA 79 >gi|260591850|ref|ZP_05857308.1| type II DNA modification methyltransferase [Prevotella veroralis F0319] gi|260536134|gb|EEX18751.1| type II DNA modification methyltransferase [Prevotella veroralis F0319] Length = 166 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG L++ F++ ++E +P T++ANFP+T LI GDI +K Sbjct: 1 MNLISLFSGAGG----LDKGFHNAGFRTMVANEFDPKICPTFKANFPDTKLIEGDIRNVK 56 Query: 61 TQDIPDHDV-LLAGFPCQPFSQAG 83 + P H ++ G PCQ +S+AG Sbjct: 57 DGEFPKHVAGIIGGPPCQSWSEAG 80 >gi|40218563|gb|AAR83217.1| chromosome partitioning protein parB [Streptococcus pyogenes] gi|50261608|gb|AAT72376.1| methylase [Streptococcus pyogenes] Length = 388 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 L D F GIGG R LE + C E + ++V++YQA + DI K+ Sbjct: 4 LTFIDFFAGIGGFRRGLELA----GMTCIGYCEKDKFAVRSYQAMYDTEGEWYSDDITKL 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K DIP D+ AG PCQ S AG Sbjct: 60 KPNDIPKADIWTAGSPCQNVSIAG 83 >gi|50914489|ref|YP_060461.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10394] gi|50903563|gb|AAT87278.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10394] Length = 422 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 L D F GIGG R LE + C E + ++V++YQA + DI K+ Sbjct: 4 LTFIDFFAGIGGFRRGLELA----GMTCIGYCEKDKFAVRSYQAMYDTEGEWYSDDITKL 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K DIP D+ AG PCQ S AG Sbjct: 60 KPNDIPKADIWTAGSPCQNVSIAG 83 >gi|291525775|emb|CBK91362.1| DNA-methyltransferase (dcm) [Eubacterium rectale DSM 17629] Length = 510 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ LF GIGG L T N ++ ++SEI+P+ + FP GDI K+ Sbjct: 4 LKLGSLFDGIGG--FPLAATMN--DIRPVWASEIDPFPMAVTAYRFPEMKHMGDITKLHG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++P DV+ G PCQ S AG Sbjct: 60 ANLPVVDVIAGGSPCQDLSVAG 81 >gi|126698504|ref|YP_001087401.1| putative DNA methylase [Clostridium difficile 630] gi|115249941|emb|CAJ67761.1| putative phage DNA modification methylase [Clostridium difficile] Length = 357 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIA 57 ML DLF GIGG RL +E+ H+ C E + ++ +Y A + DI Sbjct: 1 MLTFLDLFAGIGGFRLGMEKA-GHK---CLGHCEYDKFANLSYNAMHKPKEDEWFERDIR 56 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 +I+T++IP DV GFPCQ S AG Sbjct: 57 EIRTENIPRADVWCFGFPCQDISVAG 82 >gi|159030022|emb|CAO90403.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 412 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 6/82 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + +LF G GG+ L LE ++ EIN V T + N P +I DI KIK Sbjct: 71 VIELFAGCGGMALGLENA----GLKTQLLVEINQDCVNTLRLNRPQWNVINQDIKKIKFS 126 Query: 63 DIPDH-DVLLAGFPCQPFSQAG 83 D D D++ GFPCQPFS AG Sbjct: 127 DFRDKIDIVAGGFPCQPFSYAG 148 >gi|308176203|ref|YP_003915609.1| DNA (cytosine-5-)-methyltransferase-like protein [Arthrobacter arilaitensis Re117] gi|307743666|emb|CBT74638.1| DNA (cytosine-5-)-methyltransferase-like protein [Arthrobacter arilaitensis Re117] Length = 391 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF G GG+ L +E F E + SEIN + + ++P+ GDI I Sbjct: 32 LRVGSLFSGYGGLDLAVEYQFI---AETIWFSEINEPVARVFSHHWPDVPNLGDITAIDW 88 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +P D++ GFPCQ S G Sbjct: 89 TTVPSVDIVCGGFPCQDVSTVG 110 >gi|209901299|ref|YP_002290938.1| putative DNA methylase [Clostridium phage phiCD27] gi|199612180|gb|ACH91353.1| putative DNA methylase [Clostridium phage phiCD27] Length = 276 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIA 57 ML DLF GIGG RL +E+ H+ C E + ++ +Y A + DI Sbjct: 1 MLTFLDLFAGIGGFRLGMEKA-GHK---CLGHCEYDKFANLSYNAMHKPKEDEWFERDIR 56 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 +I+T++IP DV GFPCQ S AG Sbjct: 57 EIRTENIPRADVWCFGFPCQDISVAG 82 >gi|145641419|ref|ZP_01796998.1| cytosine specific DNA methyltransferase (BSP6IM) [Haemophilus influenzae R3021] gi|145273962|gb|EDK13829.1| cytosine specific DNA methyltransferase (BSP6IM) [Haemophilus influenzae 22.4-21] Length = 298 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 37/57 (64%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +EC SE++ KTY+ F ++L GD+ ++ + +PD D+++AGFPCQ FS G Sbjct: 1 MECIAHSEVDLNPAKTYEIFFNDSLNLGDLTQLAPKSLPDFDLMIAGFPCQTFSIIG 57 >gi|315150308|gb|EFT94324.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0012] Length = 334 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 ++ DLF GIGG RL +E +H C EI+ Y+ K+YQA + DI + Sbjct: 1 MEFLDLFAGIGGFRLGMEMAGHH----CIGFCEIDKYARKSYQAIHQTKGEIELHDITSV 56 Query: 60 KTQ---DIPDHDVLLAGFPCQPFSQAG 83 + I D+L GFPCQ FS AG Sbjct: 57 SNEFIRSIGHTDILCGGFPCQAFSIAG 83 >gi|210614083|ref|ZP_03290039.1| hypothetical protein CLONEX_02252 [Clostridium nexile DSM 1787] gi|210150861|gb|EEA81869.1| hypothetical protein CLONEX_02252 [Clostridium nexile DSM 1787] Length = 244 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKIKTQDI 64 +F GIGG R L + C EI+ Y+ ++Y+A N D KI+ +++ Sbjct: 1 MFSGIGGFREGLNRA---GGFSCVGHCEIDKYADRSYRAIFNTEGEWFCNDAKKIRPEEL 57 Query: 65 PDHDVLLAGFPCQPFSQAG 83 P+ D+L GFPCQ FS AG Sbjct: 58 PEFDLLCGGFPCQAFSVAG 76 >gi|109947509|ref|YP_664737.1| methylase [Helicobacter acinonychis str. Sheeba] gi|109714730|emb|CAJ99738.1| methylase [Helicobacter acinonychis str. Sheeba] Length = 177 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ LF GIGG E F E +++E++ + TY+ANF + L+ DI + Sbjct: 1 MEVGSLFAGIGG----FECMFLQAGFEIGWANELDKDACNTYRANFKHKLLEQDIKDLNP 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ D ++ AGFPCQ FS AG Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78 >gi|302873674|ref|YP_003842307.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|307686602|ref|ZP_07629048.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|302576531|gb|ADL50543.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] Length = 448 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 8/87 (9%) Query: 1 MLKITDL-FC-GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDI 56 M+ +T L FC GIGG RL LE T H+ C E + ++VK+Y+A F DI Sbjct: 1 MISMTFLDFCAGIGGFRLGLELT-GHK---CIGFCEKDKFAVKSYKAMFETEGEWYANDI 56 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++K+ +IP D+ GFPCQ S AG Sbjct: 57 TELKSDEIPYADIWCFGFPCQDISVAG 83 >gi|325069077|ref|ZP_08127750.1| cytosine-specific DNA modification methyltransferase [Actinomyces oris K20] Length = 448 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 10/84 (11%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK---- 60 TDLF GIGG L +C ++ EI+ + + Y+ N+ GDI Sbjct: 8 TDLFAGIGGFHAALSGMGG----QCTYAVEIDKDAARIYEQNW-GVGALGDITVDAGEHG 62 Query: 61 -TQDIPDHDVLLAGFPCQPFSQAG 83 ++ I HD+L AGFPCQPFS++G Sbjct: 63 VSERIQPHDILAAGFPCQPFSKSG 86 >gi|306833678|ref|ZP_07466805.1| DNA (cytosine-5-)-methyltransferase [Streptococcus bovis ATCC 700338] gi|304424448|gb|EFM27587.1| DNA (cytosine-5-)-methyltransferase [Streptococcus bovis ATCC 700338] Length = 451 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGG RL +E + EC EI+ ++ +Y+A F NT G++ Sbjct: 1 MKFLDLFAGIGGFRLGMEA----QGHECLGFCEIDKFARTSYKAIF-NTE--GEMEYHDI 53 Query: 62 QDIPDHD---------VLLAGFPCQPFSQAG 83 +++ DHD V+ GFPCQ FS AG Sbjct: 54 KEVTDHDFRQFRGQVEVICGGFPCQAFSLAG 84 >gi|223933016|ref|ZP_03625010.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591] gi|223898333|gb|EEF64700.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591] Length = 451 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGG RL +E H+ C EI+ ++ +Y+A F NT G+I Sbjct: 1 MKFLDLFAGIGGFRLGMESQ-GHK---CLGFCEIDKFARTSYKAMF-NTE--GEIEYHDI 53 Query: 62 QDIPDHD---------VLLAGFPCQPFSQAG 83 +++ DHD V+ GFPCQ FS AG Sbjct: 54 KEVTDHDFRQFRGQVEVICGGFPCQAFSLAG 84 >gi|91976449|ref|YP_569108.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB5] gi|91682905|gb|ABE39207.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB5] Length = 490 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF GIGG ++ F + EI+ + + ++P T +F DI KI Sbjct: 27 LRVASLFAGIGG----FDKAFESVSASVVAQCEIDSFCRAVLRRHWPQTKLFEDITKINP 82 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 + P D+ AGFPCQ S A Sbjct: 83 AEFPAADIWTAGFPCQDVSLA 103 >gi|255530844|ref|YP_003091216.1| DNA-cytosine methyltransferase [Pedobacter heparinus DSM 2366] gi|255343828|gb|ACU03154.1| DNA-cytosine methyltransferase [Pedobacter heparinus DSM 2366] Length = 350 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 21/97 (21%) Query: 2 LKITDLFCGIGGIR-------LDLEQTFNHRNVECFFSSEINPYSVKTYQANF------- 47 ++ +LF GIGG R +D +Q F EC SEI+ ++ TY AN+ Sbjct: 1 MRYIELFSGIGGFRNAADHLTVDTDQPF-----ECIAFSEIDRHAKSTYLANYNTEGEVQ 55 Query: 48 -PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + + F D K +++PD D+LL GFPCQ FS G Sbjct: 56 MDDIISFTD-EKKNIENLPDFDLLLGGFPCQAFSLLG 91 >gi|229824483|ref|ZP_04450552.1| hypothetical protein GCWU000282_01806 [Catonella morbi ATCC 51271] gi|229786084|gb|EEP22198.1| hypothetical protein GCWU000282_01806 [Catonella morbi ATCC 51271] Length = 406 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 I F G+GGI L EQT V +++E + + TY N+P+T + DI ++ Sbjct: 14 IAAFFSGVGGIELGFEQTGKFHTV---YANEFDANARTTYALNYPDTFLDPRDIHEVSPD 70 Query: 63 DIPDH-DVLLAGFPCQPFSQAG 83 +I + D+++ GFPCQ FS AG Sbjct: 71 EIGEQVDLVVGGFPCQAFSIAG 92 >gi|157419765|gb|ABV55454.1| DNA methylase [Streptococcus dysgalactiae subsp. equisimilis] Length = 451 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGG RL +E H+ C EI+ ++ +Y+A F NT G+I Sbjct: 1 MKFLDLFAGIGGFRLGMESQ-GHK---CLGFCEIDKFARTSYKAMF-NTE--GEIEYHDI 53 Query: 62 QDIPDHD---------VLLAGFPCQPFSQAG 83 +++ DHD ++ GFPCQ FS AG Sbjct: 54 KEVTDHDFRQFRGQVDIICGGFPCQAFSLAG 84 >gi|86142380|ref|ZP_01060890.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella blandensis MED217] gi|85831132|gb|EAQ49589.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella blandensis MED217] Length = 332 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 LK DLF G GG L F+++ + FS +I P +TY NFP + LI DI +K Sbjct: 5 LKYIDLFSGAGGFSLG----FDNKGFQNVFSVDIEPSFCETYNHNFPSHNLIHKDICDVK 60 Query: 61 TQDIP------DHDVLLAGFPCQPFSQAG 83 ++ + DV++ G PCQ FS AG Sbjct: 61 DAELKYLKEYDEIDVVIGGPPCQGFSIAG 89 >gi|319639602|ref|ZP_07994349.1| cytosine-specific methyltransferase [Neisseria mucosa C102] gi|317399173|gb|EFV79847.1| cytosine-specific methyltransferase [Neisseria mucosa C102] Length = 327 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 7/86 (8%) Query: 2 LKITDLFCGIGGIRLD-------LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 LK+ LFCG GG L L QT+ E ++ + + ++V+TY ANF + I Sbjct: 5 LKVVSLFCGCGGSDLGLLGGFEYLGQTYPKLPFEIVYALDFDKFAVQTYNANFEHPAICD 64 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFS 80 DI + Q++ D D+LL GFPCQ FS Sbjct: 65 DIKNLNIQELDDFDLLLGGFPCQSFS 90 >gi|319638577|ref|ZP_07993339.1| modification methylase NgoFVII [Neisseria mucosa C102] gi|317400326|gb|EFV80985.1| modification methylase NgoFVII [Neisseria mucosa C102] Length = 374 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 6/80 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 +I LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 17 RILSLFSGCGGLDLGFHQA----GYETVWANDFSHWACESFRKNIGDVIVEGDIEQIDPN 72 Query: 63 D--IPDHDVLLAGFPCQPFS 80 D IPD D++L GFPCQ FS Sbjct: 73 DPTIPDCDIILGGFPCQDFS 92 >gi|325678044|ref|ZP_08157681.1| putative DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8] gi|324110261|gb|EGC04440.1| putative DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8] Length = 324 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 8/88 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTF-------NHRNVECFFSSEINPYSVKTYQANF-PNTLI 52 M + LFCG GG + F + FS +I+ ++ TY+ANF + +I Sbjct: 1 MYNVVSLFCGCGGADMGTVGGFVFNKKKYKKHPCKLVFSCDIDQKAIDTYKANFNSDEVI 60 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFS 80 GD+ + ++++P D+L GFPCQ FS Sbjct: 61 CGDVCDLPSENVPPCDILTGGFPCQSFS 88 >gi|253755079|ref|YP_003028219.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407] gi|251817543|emb|CAZ55290.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407] Length = 451 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGG RL +E H+ C EI+ ++ +Y+A F NT G+I Sbjct: 1 MKFLDLFAGIGGFRLGMESQ-GHK---CLGFCEIDKFARTSYKAMF-NTE--GEIEYHDI 53 Query: 62 QDIPDHD---------VLLAGFPCQPFSQAG 83 +++ DHD ++ GFPCQ FS AG Sbjct: 54 KEVTDHDFRQFRGQVDIICGGFPCQAFSLAG 84 >gi|22537444|ref|NP_688295.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae 2603V/R] gi|76797962|ref|ZP_00780222.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae 18RS21] gi|77406085|ref|ZP_00783160.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae H36B] gi|313890485|ref|ZP_07824113.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus SPIN 20026] gi|22534321|gb|AAN00168.1|AE014251_12 C-5 cytosine-specific DNA methylase [Streptococcus agalactiae 2603V/R] gi|76586686|gb|EAO63184.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae 18RS21] gi|77175318|gb|EAO78112.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae H36B] gi|313121002|gb|EFR44113.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus SPIN 20026] gi|323127117|gb|ADX24414.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 451 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGG RL +E H+ C EI+ ++ +Y+A F NT G+I Sbjct: 1 MKFLDLFAGIGGFRLGMESQ-GHK---CLGFCEIDKFARTSYKAMF-NTE--GEIEYHDI 53 Query: 62 QDIPDHD---------VLLAGFPCQPFSQAG 83 +++ DHD ++ GFPCQ FS AG Sbjct: 54 KEVTDHDFRQFRGQVDIICGGFPCQAFSLAG 84 >gi|218439218|ref|YP_002377547.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] gi|218171946|gb|ACK70679.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] Length = 323 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+++ LF G GG+ L F E ++++I+ + +TYQ N + +I DI I Sbjct: 1 MIRVVSLFSGCGGMDLG----FIWAGYEIVWANDIDHDACETYQLNIGDHIIEDDIKNIN 56 Query: 61 TQDIPDHDVLLAGFPCQPFS 80 + +P+ D++L GFPCQ FS Sbjct: 57 FKHLPECDLILGGFPCQDFS 76 >gi|52841468|ref|YP_095267.1| modification methylase (Eco47II, Sau96I) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628579|gb|AAU27320.1| modification methylase (Eco47II, Sau96I) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 416 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 K+ +LF G GG+ L F++ ++C EI+ V+T + N P+ +I DIA + Sbjct: 81 FKVVELFAGAGGLALG----FHNAGLDCSMLVEIDKNPVETLRHNCPSWNVIHDDIANVD 136 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 Q I DV+ GFPCQ FS AG Sbjct: 137 FQGI-TADVVAGGFPCQAFSYAG 158 >gi|146318633|ref|YP_001198345.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 05ZYH33] gi|146320840|ref|YP_001200551.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 98HAH33] gi|253751755|ref|YP_003024896.1| C-5 cytosine-specific DNA methylase [Streptococcus suis SC84] gi|253755540|ref|YP_003028680.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407] gi|145689439|gb|ABP89945.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 05ZYH33] gi|145691646|gb|ABP92151.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 98HAH33] gi|251816044|emb|CAZ51664.1| C-5 cytosine-specific DNA methylase [Streptococcus suis SC84] gi|251818004|emb|CAZ55786.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407] Length = 451 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGG RL +E H+ C EI+ ++ +Y+A F NT G+I Sbjct: 1 MKFLDLFAGIGGFRLGMESQ-GHK---CLGFCEIDKFARTSYKAMF-NTE--GEIEYHDI 53 Query: 62 QDIPDHD---------VLLAGFPCQPFSQAG 83 +++ DHD ++ GFPCQ FS AG Sbjct: 54 KEVTDHDFRQFRGQVDIICGGFPCQAFSLAG 84 >gi|225076231|ref|ZP_03719430.1| hypothetical protein NEIFLAOT_01268 [Neisseria flavescens NRL30031/H210] gi|224952355|gb|EEG33564.1| hypothetical protein NEIFLAOT_01268 [Neisseria flavescens NRL30031/H210] Length = 374 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 6/80 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 +I LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 17 RILSLFSGCGGLDLGFHQA----GYETVWANDFSHWACESFRKNIGDVIVEGDIEQIDPN 72 Query: 63 D--IPDHDVLLAGFPCQPFS 80 D IPD D++L GFPCQ FS Sbjct: 73 DPTIPDCDIILGGFPCQDFS 92 >gi|160894995|ref|ZP_02075769.1| hypothetical protein CLOL250_02545 [Clostridium sp. L2-50] gi|156863426|gb|EDO56857.1| hypothetical protein CLOL250_02545 [Clostridium sp. L2-50] Length = 447 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 9/86 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHR--NVECFFSSEINPYSVKTYQANFPNT--LIFGDIA 57 ++ DLF GIGG R L HR C E + Y+ Y+ F D Sbjct: 20 IRFFDLFSGIGGFREGL-----HRAGGFTCVGHCEADAYADHNYRVLFDTEGEWFCNDAR 74 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 I+T+ +PD D+L AGFPCQ FS AG Sbjct: 75 NIETERMPDFDLLCAGFPCQAFSIAG 100 >gi|291514217|emb|CBK63427.1| DNA-methyltransferase (dcm) [Alistipes shahii WAL 8301] Length = 296 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 4/83 (4%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + + +LF GIGG L L Q F V + SEI+ ++V ++ NFP+ G + I Sbjct: 1 MNLLELFSGIGGFSLGLRQAGFTFDKV---YFSEIDRHAVANFKHNFPHAQHVGSVCDIT 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 I D++ G PCQ FS AG Sbjct: 58 GTSIERPDIITFGSPCQNFSAAG 80 >gi|237725529|ref|ZP_04556010.1| DNA (cytosine-5-)-methyltransferase [Bacteroides sp. D4] gi|229436216|gb|EEO46293.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei 5_1_36/D4] Length = 374 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 18/92 (19%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-------------NTLI 52 DLF GIGG + +C F+SE + Y+ +Y+AN+ N L Sbjct: 10 DLFAGIGGFHTAMHSV----GGKCVFASEWDKYARISYEANYKDIEPDLFQKDSYGNYLF 65 Query: 53 FG-DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 F DI + + IP DV GFPCQPFS AG Sbjct: 66 FNNDITEAIPESIPAFDVCCGGFPCQPFSIAG 97 >gi|218249004|ref|YP_002374375.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|218169482|gb|ACK68219.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] Length = 456 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 12/84 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDIAKIK 60 DLF GIGG R+ LEQ +C SEI+ ++K Y+ NF + GDI ++ Sbjct: 32 DLFSGIGGFRIPLEQL----GGKCLGYSEIDTEAIKVYRRNFIRYSNRDETYLGDITQL- 86 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 IP DV++ G PCQP+S AG Sbjct: 87 -NQIPFKVDVIVGGVPCQPWSIAG 109 >gi|160893669|ref|ZP_02074453.1| hypothetical protein CLOL250_01223 [Clostridium sp. L2-50] gi|156864654|gb|EDO58085.1| hypothetical protein CLOL250_01223 [Clostridium sp. L2-50] Length = 573 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 12/87 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVEC----FFSSEINPYSVKTYQANFPNTLIFGDI 56 M+ + LF GIGG L V C ++SEI P+ ++ + FP+ + GDI Sbjct: 1 MMTLGSLFDGIGGFPL--------AAVHCGGVPVWASEIEPFPMRVTKLRFPDMIHVGDI 52 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 K+ +P DV+ G PCQ S AG Sbjct: 53 TKLDGAKLPPVDVICGGSPCQDLSVAG 79 >gi|257062089|ref|YP_003139977.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|256592255|gb|ACV03142.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 456 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 12/84 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDIAKIK 60 DLF GIGG R+ LEQ +C SEI+ ++K Y+ NF + GDI ++ Sbjct: 32 DLFSGIGGFRIPLEQL----GGKCLGYSEIDTEAIKVYRRNFIRYSNRDETYLGDITQL- 86 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 IP DV++ G PCQP+S AG Sbjct: 87 -NQIPFKVDVIVGGVPCQPWSIAG 109 >gi|160931938|ref|ZP_02079330.1| hypothetical protein CLOLEP_00771 [Clostridium leptum DSM 753] gi|156868980|gb|EDO62352.1| hypothetical protein CLOLEP_00771 [Clostridium leptum DSM 753] Length = 379 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 ++ DLF GIGG R L Q C EI+ ++ ++Y+A F DI K Sbjct: 6 IRYLDLFSGIGGFREGLTQA---GGFTCAGHCEIDQHADRSYRALFDTEGEWFCDDIRKA 62 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +++PD ++L GFPCQ FS AG Sbjct: 63 DPEELPDVELLCGGFPCQAFSIAG 86 >gi|314942817|ref|ZP_07849633.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133C] gi|314953501|ref|ZP_07856416.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133A] gi|314992545|ref|ZP_07857964.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133B] gi|314997818|ref|ZP_07862728.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133a01] gi|313588159|gb|EFR67004.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133a01] gi|313592912|gb|EFR71757.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133B] gi|313594483|gb|EFR73328.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133A] gi|313598452|gb|EFR77297.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133C] Length = 144 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 ++ DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + + DI + Sbjct: 1 MRFLDLFAGIGGFRLGMEQASHH----CIGFCEIDKFARRSYKAIHDTSKEVEMHDITSV 56 Query: 60 K---TQDIPDHDVLLAGFPCQPFSQAG 83 Q + D+L GFPCQ FS AG Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83 >gi|314940603|ref|ZP_07847734.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|313640209|gb|EFS04790.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] Length = 83 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 ++ DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + + DI + Sbjct: 1 MRFLDLFAGIGGFRLGMEQASHH----CIGFCEIDKFARRSYKAIHDTSKEVEMHDITSV 56 Query: 60 K---TQDIPDHDVLLAGFPCQPFSQAG 83 Q + D+L GFPCQ FS AG Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83 >gi|192824080|ref|YP_001994542.1| gp84 [Mycobacterium phage KBG] gi|190610310|gb|ACE79832.1| gp84 [Mycobacterium phage KBG] Length = 237 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 + + LF GIGG+ L LE+ + EI+P+ + + ++P+ D+ Sbjct: 1 MNVLSLFAGIGGLELGLERL----GMRVVGQVEIDPFCQQVLEKHWPDVPKHDDVRTAVE 56 Query: 60 --KTQDIPDHDVLLAGFPCQPFSQAG 83 ++++ P DV+ GFPCQPFS AG Sbjct: 57 WWESEERPGVDVICGGFPCQPFSSAG 82 >gi|223932228|ref|ZP_03624232.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591] gi|223899209|gb|EEF65566.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591] Length = 451 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGG RL +E H+ C EI+ ++ +Y+A F NT G+I Sbjct: 1 MKFLDLFAGIGGFRLGMESQ-GHK---CVGFCEIDKFARTSYKAMF-NTE--GEIEYHDI 53 Query: 62 QDIPDHD---------VLLAGFPCQPFSQAG 83 +++ DHD ++ GFPCQ FS AG Sbjct: 54 KEVTDHDFRQFRGQVDIICGGFPCQAFSLAG 84 >gi|293371782|ref|ZP_06618192.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CMC 3f] gi|292633234|gb|EFF51805.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CMC 3f] Length = 161 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 +KI LF G GG+ L E+ + +++E + KTY+ N NT++ I I Sbjct: 1 MKIVSLFAGAGGLDLGFERA----GFDIVWANEYDKDIWKTYEKNHSNTILDKRSITDIP 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 T DIP+ D ++ G PCQ +S+AG Sbjct: 57 TTDIPECDGIIGGPPCQSWSEAG 79 >gi|210617281|ref|ZP_03291507.1| hypothetical protein CLONEX_03729 [Clostridium nexile DSM 1787] gi|210149385|gb|EEA80394.1| hypothetical protein CLONEX_03729 [Clostridium nexile DSM 1787] Length = 455 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 ++ DLF GIGG R L + C E++ Y+ K Y+ F D I Sbjct: 32 IQFFDLFSGIGGFREGLRRA---GGFTCVGHCEVDTYADKNYRLLFDTEGEWYCSDARTI 88 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + + +PD D+L AGFPCQ FS AG Sbjct: 89 EPERMPDFDLLCAGFPCQAFSIAG 112 >gi|330996255|ref|ZP_08320145.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] gi|329573759|gb|EGG55350.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] Length = 351 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 36/80 (45%), Positives = 40/80 (50%), Gaps = 9/80 (11%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGG L E T NV F EIN + + +FPN + DI K T P Sbjct: 10 LFSGIGGFDLAAEWT-GWTNV---FHCEINEFCTRILNHHFPNAEHYADITK--TDFTPW 63 Query: 67 H---DVLLAGFPCQPFSQAG 83 DVL GFPCQPFS AG Sbjct: 64 RGRIDVLSGGFPCQPFSLAG 83 >gi|256545597|ref|ZP_05472956.1| modification methylase HaeIII (cytosine-specificmethyltransferase HaeIII) [Anaerococcus vaginalis ATCC 51170] gi|256398722|gb|EEU12340.1| modification methylase HaeIII (cytosine-specificmethyltransferase HaeIII) [Anaerococcus vaginalis ATCC 51170] Length = 340 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L F E ++E + +TY+ N LI GDI KI + Sbjct: 1 MKLISLFSGAGGLDL----GFQKAGYEIVAANEFDKTIWETYEKNHEAKLIKGDIFKIPS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + P+ D ++ G PCQ +S+AG Sbjct: 57 DEFPECDGIIGGPPCQSWSEAG 78 >gi|331091171|ref|ZP_08340013.1| hypothetical protein HMPREF9477_00656 [Lachnospiraceae bacterium 2_1_46FAA] gi|330405393|gb|EGG84929.1| hypothetical protein HMPREF9477_00656 [Lachnospiraceae bacterium 2_1_46FAA] Length = 375 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 17/86 (19%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA-------K 58 DL GIGG+R E T NV ++EI+ Y+ TYQ ++GD A + Sbjct: 7 DLCAGIGGMRKGFELTGYFHNV---LAAEIDKYACMTYQH------LYGDDANHDLTSEE 57 Query: 59 IKTQ-DIPDHDVLLAGFPCQPFSQAG 83 K + D +DVLLAGFPCQ FS+AG Sbjct: 58 FKAELDTIQYDVLLAGFPCQTFSKAG 83 >gi|22538008|ref|NP_688859.1| prophage LambdaSa2, type II DNA modification methyltransferase [Streptococcus agalactiae 2603V/R] gi|22534910|gb|AAN00732.1|AE014276_13 prophage LambdaSa2, type II DNA modification methyltransferase, putative [Streptococcus agalactiae 2603V/R] Length = 437 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K DLF GIGG RL +EQ + EC EIN ++ +Y+ + + DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGMEQAGH----ECIGFCEINKFARASYKVIHDTEGEIELHDITRV 56 Query: 60 KTQ---DIPDHDVLLAGFPCQPFSQAG 83 + I DV+ GFPCQ FS AG Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83 >gi|296114087|ref|YP_003628025.1| cytosine-specific methyltransferase [Moraxella catarrhalis RH4] gi|295921781|gb|ADG62132.1| cytosine-specific methyltransferase [Moraxella catarrhalis RH4] gi|326560672|gb|EGE11040.1| cytosine-specific methyltransferase [Moraxella catarrhalis 46P47B1] Length = 318 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-I 64 DLF G+GG ++ EC F+SE + + KTY AN + +GDI +T++ I Sbjct: 8 DLFAGVGGFHFAMQAV----GGECVFASEWDLNAKKTYFANH-GFVPYGDITLDETKEKI 62 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P + DVL AGFPCQ FS AG Sbjct: 63 PQNFDVLCAGFPCQAFSVAG 82 >gi|258514764|ref|YP_003190986.1| DNA-cytosine methyltransferase [Desulfotomaculum acetoxidans DSM 771] gi|257778469|gb|ACV62363.1| DNA-cytosine methyltransferase [Desulfotomaculum acetoxidans DSM 771] Length = 703 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRL-DLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 L + LF GIGG L + Q F ++SEI P+ ++ + FP L GDI K+K Sbjct: 5 LSLGSLFDGIGGFPLAGVRQGF-----ASVWASEIEPFPIEVTKIRFPEMLHVGDITKLK 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++ DV+ G PCQ S AG Sbjct: 60 GAELAPVDVVCGGSPCQDLSVAG 82 >gi|15611502|ref|NP_223153.1| type II DNA modification (methyltransferase [Helicobacter pylori J99] gi|4154963|gb|AAD06007.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter pylori J99] Length = 351 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFS---THPYFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57 Query: 60 KTQDIPDH--DVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPRVPIDILLGGPPCQSYSTLG 83 >gi|312901958|ref|ZP_07761220.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0470] gi|311290894|gb|EFQ69450.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0470] Length = 380 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 ++ DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + + DI + Sbjct: 1 MRFLDLFAGIGGFRLGMEQASHH----CIGFCEIDKFARRSYKAIHDTSKEVEMHDITSV 56 Query: 60 K---TQDIPDHDVLLAGFPCQPFSQAG 83 Q + D+L GFPCQ FS AG Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83 >gi|147668731|ref|YP_001213549.1| DNA-cytosine methyltransferase [Dehalococcoides sp. BAV1] gi|146269679|gb|ABQ16671.1| DNA-cytosine methyltransferase [Dehalococcoides sp. BAV1] Length = 335 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 ++I LF G GG+ L E+ FN +++E + TYQ NFPNT L I +I Sbjct: 1 MQIISLFSGAGGLDLGFEKAGFN-----VVWANEYDKTIWDTYQHNFPNTNLDTRSITEI 55 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +IP D ++ G PCQ +S+AG Sbjct: 56 PSTEIPTSDGIIGGPPCQSWSEAG 79 >gi|167772229|ref|ZP_02444282.1| hypothetical protein ANACOL_03604 [Anaerotruncus colihominis DSM 17241] gi|167665332|gb|EDS09462.1| hypothetical protein ANACOL_03604 [Anaerotruncus colihominis DSM 17241] Length = 603 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M + LF GIGG L + +E ++SEI + ++ + FP+ L GDI K+ Sbjct: 1 MPTLGSLFDGIGGFPLAAVRN----GIEPVWASEIEAFPIEVTRKRFPSILHVGDITKLN 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++P D++ G PCQ S AG Sbjct: 57 GAELPPVDIITGGSPCQDLSVAG 79 >gi|161869727|ref|YP_001598894.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria meningitidis 053442] gi|161595280|gb|ABX72940.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria meningitidis 053442] Length = 374 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 6/80 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 17 KILSLFSGCGGLDLGFHQA----GYETVWANDFSHWACESFRKNIGDVIVEGDIEQIDPN 72 Query: 63 D--IPDHDVLLAGFPCQPFS 80 + IPD D++L GFPCQ FS Sbjct: 73 NPTIPDCDIILGGFPCQDFS 92 >gi|317013900|gb|ADU81336.1| type II DNA modification (methyltransferase) [Helicobacter pylori Gambia94/24] Length = 351 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H + E ++++I+ ++ +YQAN T I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFSV---HPHFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HYHNLPCVPIDILLGGPPCQSYSTLG 83 >gi|229100187|ref|ZP_04231087.1| hypothetical protein bcere0020_53880 [Bacillus cereus Rock3-29] gi|228683229|gb|EEL37207.1| hypothetical protein bcere0020_53880 [Bacillus cereus Rock3-29] Length = 306 Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 L DLF G+GG RL +EQ HR C E + ++ K+Y+A + + DI+ I Sbjct: 3 LTFIDLFAGLGGFRLGMEQA-GHR---CLGYVEWDKFARKSYEAIHDTGEEWTWNDISTI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 ++IP D GFPCQ S G Sbjct: 59 DYRNIPKSDCWTFGFPCQDISIGG 82 >gi|330723388|gb|AEC45758.1| DNA-cytosine methyltransferase family protein [Mycoplasma hyorhinis MCLD] Length = 407 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-----YQANFPNT--LIFG 54 +K+ +LF G+GG RL E+T + + ++++ P K Y +F N+ + Sbjct: 9 IKVVELFAGVGGFRLGFERT--SKLFKTIWANQWEPNKTKQWAFDCYTKHFGNSDNHVNE 66 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA + Q +P+HD+L+ GFPCQ +S A Sbjct: 67 DIANVIDQ-VPEHDLLVGGFPCQDYSVA 93 >gi|238765010|ref|ZP_04625947.1| DNA-cytosine methyltransferase [Yersinia kristensenii ATCC 33638] gi|238696779|gb|EEP89559.1| DNA-cytosine methyltransferase [Yersinia kristensenii ATCC 33638] Length = 338 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK-IK 60 K+ DLFCG GG+ + E + + + ++KTY ANF N + +I + I+ Sbjct: 7 FKVIDLFCGAGGLSAGFLKGKQANYFESILAIDNDTAAIKTYNANFGNHGVTANIDEWIE 66 Query: 61 TQDIPDHDVLLAGFPCQPFS 80 +IP D+++ G PCQ FS Sbjct: 67 ENEIPQADLVIGGPPCQGFS 86 >gi|304373002|ref|YP_003856211.1| DNA-cytosine methyltransferase family protein [Mycoplasma hyorhinis HUB-1] gi|304309193|gb|ADM21673.1| DNA-cytosine methyltransferase family protein [Mycoplasma hyorhinis HUB-1] Length = 407 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-----YQANFPNT--LIFG 54 +K+ +LF G+GG RL E+T + + ++++ P K Y +F N+ + Sbjct: 9 IKVVELFAGVGGFRLGFERT--SKLFKTIWANQWEPNKTKQWAFDCYTKHFGNSDNHVNE 66 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA + Q +P+HD+L+ GFPCQ +S A Sbjct: 67 DIANVIDQ-VPEHDLLVGGFPCQDYSVA 93 >gi|262283394|ref|ZP_06061160.1| cytosine-specific methyltransferase NlaX [Streptococcus sp. 2_1_36FAA] gi|262260885|gb|EEY79585.1| cytosine-specific methyltransferase NlaX [Streptococcus sp. 2_1_36FAA] Length = 460 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 21/93 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGG RL +E + +C E++ ++ K+Y+A IF +++ Sbjct: 1 MKFLDLFAGIGGFRLGMEAAGH----QCVGFCEVDGFARKSYKA------IFNTEKEVEL 50 Query: 62 QDI---PDH--------DVLLAGFPCQPFSQAG 83 DI PD D+L GFPCQ FS AG Sbjct: 51 HDIRSVPDESIRGLGQVDILCGGFPCQSFSLAG 83 >gi|291543286|emb|CBL16395.1| DNA-methyltransferase (dcm) [Ruminococcus sp. 18P13] Length = 369 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 5/80 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKIKTQD 63 DL GIGG L T ++R C +EI+ + K Y A + L +GD+ I ++ Sbjct: 7 DLCSGIGGFHSGLVNTGHYR---CVGHAEIDKNAEKAYNAIYGEEGGLNYGDLRTINPRE 63 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+L GFPCQ FS AG Sbjct: 64 LPHFDLLCGGFPCQSFSVAG 83 >gi|291530602|emb|CBK96187.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3] Length = 369 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 5/80 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKIKTQD 63 DL GIGG L T ++R C +EI+ + K Y A + L +GD+ I ++ Sbjct: 7 DLCSGIGGFHSGLVNTGHYR---CVGHAEIDKNAEKAYNAIYGEEGGLNYGDLRTINPRE 63 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+L GFPCQ FS AG Sbjct: 64 LPHFDLLCGGFPCQSFSVAG 83 >gi|145592627|ref|YP_001156924.1| C-5 cytosine-specific DNA methylase [Salinispora tropica CNB-440] gi|145301964|gb|ABP52546.1| C-5 cytosine-specific DNA methylase [Salinispora tropica CNB-440] Length = 236 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----A 57 L + +LF GIGG+ L L++ + EINP+ ++P D+ A Sbjct: 6 LNVLELFAGIGGLSLGLQRA----GLRIVGHVEINPFCRAVLHKHWPEVPCHDDVRTAAA 61 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D P DV+ G+PCQP S AG Sbjct: 62 WWRSTDRPRVDVVAGGYPCQPESTAG 87 >gi|260913722|ref|ZP_05920198.1| modification methylase NgoPII [Pasteurella dagmatis ATCC 43325] gi|260632261|gb|EEX50436.1| modification methylase NgoPII [Pasteurella dagmatis ATCC 43325] Length = 329 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF G GG+ L E+ E ++E + T++AN P T LI GDI IK Sbjct: 1 MKVISLFSGCGGLDLGFEKA----GFEIPVANEYDKTIWATFKANHPKTKLIEGDIRSIK 56 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 D P+ D ++ G PCQ +S+AG Sbjct: 57 EDDFPNEIDGIIGGPPCQSWSEAG 80 >gi|324323924|gb|ADY24967.1| modification methylase SPRI [Bacillus thuringiensis serovar finitimus YBT-020] Length = 290 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 L DLF G+GG R +EQ H+ C EI+P++ K+Y+A DI K+ Sbjct: 3 LTFLDLFSGVGGFRFGMEQA-GHK---CLGYVEIDPHARKSYEAIHQTEGEWSAHDITKV 58 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 +++ DV+ GFPCQ FS AG Sbjct: 59 SNKELRRFRGKVDVICGGFPCQAFSIAG 86 >gi|160939240|ref|ZP_02086591.1| hypothetical protein CLOBOL_04134 [Clostridium bolteae ATCC BAA-613] gi|158438203|gb|EDP15963.1| hypothetical protein CLOBOL_04134 [Clostridium bolteae ATCC BAA-613] Length = 366 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 32/81 (39%), Positives = 38/81 (46%), Gaps = 7/81 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAKIKTQ 62 D F GIG RL LEQ C EI+ Y+ +YQA DI K+ Q Sbjct: 5 DFFAGIGLFRLGLEQA----GWTCKGHCEIDKYANMSYQAMHHIKEGEWFEEDITKVSAQ 60 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +PD D+ GFPCQ S AG Sbjct: 61 SLPDVDLWTGGFPCQDVSMAG 81 >gi|86750436|ref|YP_486932.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2] gi|86573464|gb|ABD08021.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2] Length = 438 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 35/86 (40%), Positives = 43/86 (50%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDI--AK 58 + DLFCG GG L Q F S+ +P ++ TY+ANFP I GDI A Sbjct: 6 FSVVDLFCGAGG----LSQGFRDAGFRVVAGSDNDPDAMATYRANFPEAAGITGDIRSAP 61 Query: 59 IKTQDIP---DHDVLLAGFPCQPFSQ 81 IK Q + VL+ G PCQ FSQ Sbjct: 62 IKEQLLEAARRATVLIGGPPCQAFSQ 87 >gi|281424544|ref|ZP_06255457.1| modification methylase NgoFVII [Prevotella oris F0302] gi|281401381|gb|EFB32212.1| modification methylase NgoFVII [Prevotella oris F0302] Length = 131 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 50/82 (60%), Gaps = 6/82 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ LF G GG+ L EQ +++ + ++++ + +T++ +F + ++ GDI +I Sbjct: 6 IRVVSLFSGCGGLDLGFEQVGDYKTL---WANDFKHEACQTFRRHFGDIIVEGDIEQIDP 62 Query: 62 QD---IPDHDVLLAGFPCQPFS 80 + +PD D++L GFPCQ FS Sbjct: 63 YNNFSVPDCDLVLGGFPCQDFS 84 >gi|262283530|ref|ZP_06061296.1| cytosine-specific methyltransferase NlaX [Streptococcus sp. 2_1_36FAA] gi|262261021|gb|EEY79721.1| cytosine-specific methyltransferase NlaX [Streptococcus sp. 2_1_36FAA] Length = 411 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 21/93 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGG R +E + EC E++ ++ K+Y+A IF +++ Sbjct: 1 MKFLDLFSGIGGFRFGMEAAGH----ECIGFCEVDVFARKSYKA------IFNTEKEVEL 50 Query: 62 QDI---PDH--------DVLLAGFPCQPFSQAG 83 DI PD D+L GFPCQ FS AG Sbjct: 51 HDIRSVPDESIRGLGQVDILCGGFPCQSFSLAG 83 >gi|207092664|ref|ZP_03240451.1| type II DNA modification enzyme [Helicobacter pylori HPKX_438_AG0C1] gi|207108938|ref|ZP_03243100.1| type II DNA modification enzyme [Helicobacter pylori HPKX_438_CA4C1] Length = 160 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H + E ++++I+ ++ +YQAN +I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFS---THPHFELIWANDIDKDAILSYQANHKEVQIILCDIVQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|319412045|emb|CBY91978.1| C-5-cytosine-specific DNA methylase [Streptococcus pneumoniae] Length = 452 Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL +E + EC EI+ ++ K+Y++ F G+I Sbjct: 1 MRFIDLFSGIGGFRLGMESVRH----ECIGFCEIDKFARKSYKSFFQTE---GEIEFRDI 53 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 +D+ D DV+ GFPCQ FS AG Sbjct: 54 RDVSDDEFKKLRGKVDVICGGFPCQAFSIAG 84 >gi|183983894|ref|YP_001852185.1| phage DNA methylase [Mycobacterium marinum M] gi|183177220|gb|ACC42330.1| conserved hypothetical phage DNA methylase [Mycobacterium marinum M] Length = 291 Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++I LF G GG+ L +E F + E +P + K ++P GD+ +I Sbjct: 4 MRIGSLFSGAGGLDLAVEHIFG---ATVAWHCENDPAASKVLAHHWPGVPNLGDVTEIDW 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + D+L G+PCQPFS AG Sbjct: 61 AQVEPVDILCGGWPCQPFSLAG 82 >gi|289167633|ref|YP_003445902.1| methyl transferase [Streptococcus mitis B6] gi|288907200|emb|CBJ22035.1| methyl transferase [Streptococcus mitis B6] Length = 452 Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL +E + H EC EI+ ++ K+Y++ F G+I Sbjct: 1 MRFIDLFSGIGGFRLGME-SVGH---ECIGFCEIDKFARKSYKSIFQTE---GEIEFHDI 53 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 +D+ D DV+ GFPCQ FS AG Sbjct: 54 RDVSDDEFKKLRGKVDVICGGFPCQAFSIAG 84 >gi|15901190|ref|NP_345794.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae TIGR4] gi|14972819|gb|AAK75434.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae TIGR4] Length = 407 Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 16/92 (17%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+ + DLF GIGG R+ +E + EC EI+ ++ K+Y++ F G+I Sbjct: 1 MIWVLDLFAGIGGFRMGMEA----QGHECLGFCEIDKFARKSYKSIFQTE---GEIEFHD 53 Query: 61 TQDIPDH---------DVLLAGFPCQPFSQAG 83 +D+ D DV+ GFPCQ FS AG Sbjct: 54 IRDVSDDEFKKLRGKVDVICGGFPCQAFSIAG 85 >gi|331090242|ref|ZP_08339130.1| hypothetical protein HMPREF1025_02713 [Lachnospiraceae bacterium 3_1_46FAA] gi|330402188|gb|EGG81760.1| hypothetical protein HMPREF1025_02713 [Lachnospiraceae bacterium 3_1_46FAA] Length = 464 Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKI 59 L DL GIGG RL LE HR C E + ++ +Y+A + + D+ K+ Sbjct: 4 LTFLDLCSGIGGFRLGLESA-GHR---CIGYCEYDRFARASYEAMYDTEGEWKADDVTKL 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K++D+P D+ GFPCQ S AG Sbjct: 60 KSEDVPYADIWCFGFPCQDISVAG 83 >gi|317010732|gb|ADU84479.1| type II DNA modification (methyltransferase) [Helicobacter pylori SouthAfrica7] Length = 348 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 DCYNLPCTSIDILLGGPPCQSYSTLG 83 >gi|288904476|ref|YP_003429697.1| DNA methylase [Streptococcus gallolyticus UCN34] gi|288731201|emb|CBI12749.1| Putative DNA methylase [Streptococcus gallolyticus UCN34] Length = 366 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG R+ LE + HR C EI+P++ +Y+ + + F DI + Sbjct: 1 MKFFDLFAGIGGFRMGLE-SLGHR---CVGFCEIDPFARASYKVIYDTEGDIEFHDIRNV 56 Query: 60 KT---QDIPDHDVLLAGFPCQPFSQAG 83 T + I D++ GFPCQ FS AG Sbjct: 57 TTDAIRGIGRVDIICGGFPCQAFSIAG 83 >gi|308184264|ref|YP_003928397.1| type II DNA modification enzyme [Helicobacter pylori SJM180] gi|308060184|gb|ADO02080.1| type II DNA modification enzyme [Helicobacter pylori SJM180] Length = 188 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H + E ++++I+ ++ +YQAN I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFSV---HPHFELIWANDIDKDAILSYQANHKEAQTILCDIAQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|270157659|ref|ZP_06186316.1| DNA-cytosine methyltransferase family protein [Legionella longbeachae D-4968] gi|269989684|gb|EEZ95938.1| DNA-cytosine methyltransferase family protein [Legionella longbeachae D-4968] Length = 414 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 K+ +LF G GG+ L F++ + C EI+ + V+T + N P+ +I DIA + Sbjct: 81 FKVVELFAGAGGLALG----FHNAGLNCELLVEIDKFPVETLRKNCPSWNVICDDIANVN 136 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + + D++ GFPCQ FS AG Sbjct: 137 FRGV-KADIVAGGFPCQAFSYAG 158 >gi|160933407|ref|ZP_02080795.1| hypothetical protein CLOLEP_02253 [Clostridium leptum DSM 753] gi|156867284|gb|EDO60656.1| hypothetical protein CLOLEP_02253 [Clostridium leptum DSM 753] Length = 382 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIKTQD 63 DLF GIGG R L + C EI+ Y+ ++Y+A F D+ + + Sbjct: 9 DLFSGIGGFREGLSRA---GGFVCVGHCEIDKYADQSYRALFDTKGEWFREDVREADPDE 65 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +PD D+L GFPCQ FS AG Sbjct: 66 MPDFDLLCGGFPCQSFSIAG 85 >gi|148988377|ref|ZP_01819824.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae SP6-BS73] gi|147926058|gb|EDK77132.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae SP6-BS73] Length = 343 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 7/86 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFN-------HRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 LKI LF G GG + F+ +E ++++I + K ++ NF T Sbjct: 4 LKIASLFSGGGGTDIGFAGGFDFLGKHYADNQIEIVYANDIEDSANKMFEKNFGVTPDNR 63 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFS 80 +I +IK+ +IP D+L GFPCQ FS Sbjct: 64 NIREIKSDEIPSFDILTGGFPCQSFS 89 >gi|322376648|ref|ZP_08051141.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus sp. M334] gi|321282455|gb|EFX59462.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus sp. M334] Length = 452 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL +E + H EC EI+ ++ K+Y++ F G+I Sbjct: 1 MRFIDLFSGIGGFRLGME-SVGH---ECIGFCEIDKFARKSYKSIFQTE---GEIEFHDI 53 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 +D+ D DV+ GFPCQ FS AG Sbjct: 54 RDVSDDEFKKLRGKVDVVCGGFPCQAFSIAG 84 >gi|262402827|ref|ZP_06079388.1| type II restriction-modification system methylation subunit [Vibrio sp. RC586] gi|262351609|gb|EEZ00742.1| type II restriction-modification system methylation subunit [Vibrio sp. RC586] Length = 341 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 7/83 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61 + LF G GG+ L F+ FS++I TY+ N + LI DI KI Sbjct: 11 RTISLFSGCGGLDLG----FHKAGFNIVFSNDIEKNVESTYRYNLGDILI-KDITKIDID 65 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 +IP D DV+LAG PCQPFS AG Sbjct: 66 SEIPNDIDVILAGIPCQPFSSAG 88 >gi|120402107|ref|YP_951936.1| DNA-cytosine methyltransferase [Mycobacterium vanbaalenii PYR-1] gi|119954925|gb|ABM11930.1| DNA-cytosine methyltransferase [Mycobacterium vanbaalenii PYR-1] Length = 386 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 4/74 (5%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF G GG+ L E + R + ++ + +P++V+TYQ N ++ GD+ ++P Sbjct: 20 LFAGCGGMDLGAEAS---RAAKVVWAIDSDPWAVQTYQRNIGKHIVEGDVTTTPVPEVP- 75 Query: 67 HDVLLAGFPCQPFS 80 DVLLAG PCQ +S Sbjct: 76 CDVLLAGPPCQDYS 89 >gi|194335797|ref|YP_002017591.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme BU-1] gi|194308274|gb|ACF42974.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme BU-1] Length = 434 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 L++ DLF G GG+ F H + ++++ N + ++Y ANF + GDI I Sbjct: 35 LRVIDLFAGAGGLSAGFSHFFGH-HFTPVWANDFNSCAAESYNANFGHHCRVGDIVDILD 93 Query: 60 -KTQDIPDHDVLLAGFPCQPFS 80 T IP DV++ G PCQ FS Sbjct: 94 NPTTIIPKADVVIGGPPCQGFS 115 >gi|150007509|ref|YP_001302252.1| site-specific DNA-methyltransferase [Parabacteroides distasonis ATCC 8503] gi|149935933|gb|ABR42630.1| site-specific DNA-methyltransferase [Parabacteroides distasonis ATCC 8503] Length = 427 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 9/80 (11%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP- 65 LF G+GG L E E F EIN + K + +FP ++ + DI + T P Sbjct: 6 LFSGVGGFDLAAEWM----GWENLFHCEINEWCQKVLRFHFPKSIQYDDITR--TDFTPW 59 Query: 66 --DHDVLLAGFPCQPFSQAG 83 DVL GFPCQPFS AG Sbjct: 60 RGKVDVLTGGFPCQPFSTAG 79 >gi|293568986|ref|ZP_06680299.1| methyl transferase [Enterococcus faecium E1071] gi|291588419|gb|EFF20254.1| methyl transferase [Enterococcus faecium E1071] Length = 380 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 ++ DLF GIGG RL +EQ + +C EI+ ++ ++Y+A + + DI ++ Sbjct: 1 MRFLDLFAGIGGFRLGMEQAGH----QCIGFCEIDEFARRSYKAIHDTRKEVEMHDITRV 56 Query: 60 K---TQDIPDHDVLLAGFPCQPFSQAG 83 Q + DVL GFPCQ FS AG Sbjct: 57 SDEFVQSLGPVDVLCGGFPCQAFSIAG 83 >gi|166365618|ref|YP_001657891.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] gi|166087991|dbj|BAG02699.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] Length = 412 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 6/82 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + +LF G GG+ L LE ++ EIN V T + N P +I DI KIK Sbjct: 71 VIELFAGCGGMALGLENA----GLKTQLLVEINQDCVNTLRLNRPQWNVINQDIKKIKFS 126 Query: 63 DIPDH-DVLLAGFPCQPFSQAG 83 + D D++ GFPCQPFS AG Sbjct: 127 NFRDKIDIVAGGFPCQPFSYAG 148 >gi|317055417|ref|YP_004103884.1| DNA-cytosine methyltransferase [Ruminococcus albus 7] gi|315447686|gb|ADU21250.1| DNA-cytosine methyltransferase [Ruminococcus albus 7] Length = 543 Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 7/84 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ DLF G GG+ L QT + E + E NP KTY+ N P + GD+ Sbjct: 5 KVVDLFAGAGGLSLGFVQT---KKYEIKVAFENNPNMQKTYRRNHPKVDVRGDVCAADYS 61 Query: 63 DIPDH----DVLLAGFPCQPFSQA 82 +I DV++ G PCQ FS A Sbjct: 62 EIKRKYGTIDVVIGGPPCQGFSNA 85 >gi|325997344|gb|ADZ49552.1| Type II DNA modification enzyme [Helicobacter pylori 2017] Length = 159 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFSV---HPYFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83 >gi|325995748|gb|ADZ51153.1| DNA-cytosine methyltransferase [Helicobacter pylori 2018] Length = 160 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFSV---HPYFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83 >gi|238788388|ref|ZP_04632182.1| DNA-cytosine methyltransferase [Yersinia frederiksenii ATCC 33641] gi|238723634|gb|EEQ15280.1| DNA-cytosine methyltransferase [Yersinia frederiksenii ATCC 33641] Length = 380 Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK-IK 60 K+ DLFCG GG+ + E + + + +++TY ANF N + +I + I Sbjct: 11 FKVIDLFCGAGGLSAGFLKGKQANYFESILAIDNDTAAIRTYNANFGNHGVTANIDEWIA 70 Query: 61 TQDIPDHDVLLAGFPCQPFS 80 +IP D+++ G PCQ FS Sbjct: 71 ENEIPQADIVIGGPPCQGFS 90 >gi|289167787|ref|YP_003446056.1| site-specific DNA methylase [Streptococcus mitis B6] gi|288907354|emb|CBJ22191.1| site-specific DNA methylase [Streptococcus mitis B6] Length = 346 Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 7/86 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFN-------HRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 LKI LF G GG + F+ +E ++++I + K ++ NF T Sbjct: 4 LKIASLFSGGGGTDIGFAGGFDFLGKHYADNQIEIVYANDIEDSANKMFEKNFGVTPDNR 63 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFS 80 +I +IK+ +IP D+L GFPCQ FS Sbjct: 64 NIREIKSDEIPSFDILTGGFPCQSFS 89 >gi|307637157|gb|ADN79607.1| DNA cytosine methyltransferase [Helicobacter pylori 908] Length = 165 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFSV---HPYFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83 >gi|292486555|ref|YP_003529421.1| modification methylase [Erwinia amylovora CFBP1430] gi|291551968|emb|CBA19005.1| modification methylase [Erwinia amylovora CFBP1430] Length = 379 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 5/80 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + +F G GG+ L Q + ++++ + + TY+ N + +I GD+ + D Sbjct: 18 VVSMFSGCGGMDLGFVQA----GYDVVWANDFDADACLTYKRNIGD-IIHGDVTTLDVPD 72 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 + + DVL AGFPCQPFS AG Sbjct: 73 VKNLDVLTAGFPCQPFSNAG 92 >gi|294787738|ref|ZP_06752982.1| modification methylase NgoPII [Simonsiella muelleri ATCC 29453] gi|294484031|gb|EFG31714.1| modification methylase NgoPII [Simonsiella muelleri ATCC 29453] Length = 331 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF G GG+ L E+ E ++E + TY+AN P T LI GDI I+ Sbjct: 1 MKVISLFSGCGGLDLGFERA----GFEIPVANEYDKTIWATYKANHPKTQLIEGDIRHIQ 56 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 + PD D ++ G PCQ +S+AG Sbjct: 57 EINFPDEIDGIIGGPPCQSWSEAG 80 >gi|167751790|ref|ZP_02423917.1| hypothetical protein ALIPUT_00030 [Alistipes putredinis DSM 17216] gi|167660688|gb|EDS04818.1| hypothetical protein ALIPUT_00030 [Alistipes putredinis DSM 17216] Length = 318 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 33/78 (42%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGG L E N F+ EI+P+ K + +FPN + DI D Sbjct: 6 LFSGIGGFDLAAEWA-GWTNA---FNCEIDPFCRKVLKYHFPNAEQYEDIRTTDFTVWKD 61 Query: 67 H-DVLLAGFPCQPFSQAG 83 DVL GFPCQPFS AG Sbjct: 62 RIDVLTGGFPCQPFSLAG 79 >gi|167753338|ref|ZP_02425465.1| hypothetical protein ALIPUT_01612 [Alistipes putredinis DSM 17216] gi|167659269|gb|EDS03399.1| hypothetical protein ALIPUT_01612 [Alistipes putredinis DSM 17216] Length = 319 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 33/78 (42%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGG L E N F+ EI+P+ K + +FPN + DI D Sbjct: 6 LFSGIGGFDLAAEWA-GWTNA---FNCEIDPFCRKVLKYHFPNAEQYEDIRATDFTVWKD 61 Query: 67 H-DVLLAGFPCQPFSQAG 83 DVL GFPCQPFS AG Sbjct: 62 RIDVLTGGFPCQPFSLAG 79 >gi|292897792|ref|YP_003537161.1| cytosine-specific DNA methylase [Erwinia amylovora ATCC 49946] gi|291197640|emb|CBJ44735.1| putative modification methylase (cytosine-specific DNA methylase) [Erwinia amylovora ATCC 49946] Length = 372 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 5/80 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + +F G GG+ L Q + ++++ + + TY+ N + +I GD+ + D Sbjct: 11 VVSMFSGCGGMDLGFVQA----GYDVVWANDFDADACLTYKRNIGD-IIHGDVTTLDVPD 65 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 + + DVL AGFPCQPFS AG Sbjct: 66 VKNLDVLTAGFPCQPFSNAG 85 >gi|269964614|ref|ZP_06178852.1| hypothetical protein VMC_02820 [Vibrio alginolyticus 40B] gi|269830513|gb|EEZ84734.1| hypothetical protein VMC_02820 [Vibrio alginolyticus 40B] Length = 556 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 6/80 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 +LF G GG L LE+ +EC ++ +P + T + N PN L+ G+I+ + I Sbjct: 8 ELFAGCGGTALGLEKA----GMECVLLNDSDPRACDTLRTNRPNWNLVEGNISNVDFSTI 63 Query: 65 PDHDVLLAG-FPCQPFSQAG 83 H LL+G FP QPFS AG Sbjct: 64 STHVDLLSGSFPVQPFSLAG 83 >gi|119512221|ref|ZP_01631310.1| hypothetical protein N9414_08959 [Nodularia spumigena CCY9414] gi|119463119|gb|EAW44067.1| hypothetical protein N9414_08959 [Nodularia spumigena CCY9414] Length = 393 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 11/86 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQD 63 DLFCG GGI L Q S EI+P + T++ NFP F GDI + QD Sbjct: 63 VDLFCGAGGITQGLSQA----GFTPLASVEISPIASATHKKNFPQCHHFCGDIEQFSAQD 118 Query: 64 I------PDHDVLLAGFPCQPFSQAG 83 P+ +V++ G PCQ FS AG Sbjct: 119 WLQQIGSPEVNVVVGGPPCQGFSVAG 144 >gi|169823586|ref|YP_001691089.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328] gi|167832206|dbj|BAG09121.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328] Length = 330 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLD-LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + + LF G GG+ L ++ FN ++E + +TY+ N+ LI DI ++ Sbjct: 1 MDLISLFSGAGGLDLGFIKAGFN-----VLVANEYDKRIWETYEKNYETRLIKDDITNVR 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + ++PD D L+ G PCQ +S+AG Sbjct: 56 SNELPDCDGLIGGPPCQSWSEAG 78 >gi|225856779|ref|YP_002738290.1| methyl transferase [Streptococcus pneumoniae P1031] gi|225724445|gb|ACO20297.1| methyl transferase [Streptococcus pneumoniae P1031] Length = 452 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL +E + H EC EI+ ++ K+Y++ F G+I Sbjct: 1 MRFIDLFSGIGGFRLGME-SVGH---ECIGFCEIDKFARKSYKSIFQTE---GEIEFHDI 53 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 +D+ D D++ GFPCQ FS AG Sbjct: 54 RDVSDAEFKKLRGKVDIICGGFPCQAFSIAG 84 >gi|282598683|ref|YP_003358780.1| gp77 [Mycobacterium phage Peaches] gi|255928210|gb|ACU41828.1| gp77 [Mycobacterium phage Peaches] gi|302858592|gb|ADL71338.1| gp78 [Mycobacterium phage Eagle] Length = 177 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 8/83 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKIK 60 +I LF G GG+ L +E+ F + + + E+ + F PN GD++K+ Sbjct: 6 RIGSLFSGAGGLDLAVEEVFGGQTI---WQVEVEKAAATLLAKRFGVPN---LGDVSKVN 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++P D+L GFPCQ S AG Sbjct: 60 WHEVPAVDILCGGFPCQDVSPAG 82 >gi|312200922|ref|YP_004020983.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c] gi|311232258|gb|ADP85113.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c] Length = 384 Score = 50.8 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 6/80 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLFCG GG+ L Q + S + + S++T++ANFP I DI D Sbjct: 38 LIDLFCGAGGMTLGFMQA----GFQPILSIDHDLPSIETHRANFPGMSICTDIRDF--VD 91 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 P DV++ G PCQ FS+ G Sbjct: 92 FPSADVVVGGPPCQGFSRLG 111 >gi|168335325|ref|ZP_02693422.1| DNA-cytosine methyltransferase [Epulopiscium sp. 'N.t. morphotype B'] Length = 324 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ LF G GG+ L E+ E ++E + TY+ N LI GDI+KI + Sbjct: 1 MRLISLFAGAGGLDLGFEKA----GYEIAAANEYDKTIWATYEKNHKGPLIKGDISKIPS 56 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 D PD D ++ G PCQ +S AG Sbjct: 57 ADFPDGIDGIIGGPPCQSWSAAG 79 >gi|307570754|emb|CAR83933.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes L99] gi|307572166|emb|CAR85345.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes L99] Length = 426 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K DLF GIGG RL +E+ + EC EI+ ++ K+YQA + DI K+ Sbjct: 1 MKFLDLFAGIGGFRLGMERAGH----ECVGYVEIDKFARKSYQAIHDTEGEWTREDITKV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 ++ D++ GFPCQ FS AG Sbjct: 57 TDEEWRTLRGTVDIICGGFPCQSFSIAG 84 >gi|206975132|ref|ZP_03236046.1| modification methylase HaeIII [Bacillus cereus H3081.97] gi|206746553|gb|EDZ57946.1| modification methylase HaeIII [Bacillus cereus H3081.97] Length = 352 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 10/86 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + DLF G+GG+ L EQ E ++E + Y+ N NT +I GDIA++ + Sbjct: 5 VIDLFAGVGGLSLGFEQ----EGFEVVLANEYDESIANAYKKNHRNTKMIVGDIAELDIK 60 Query: 63 DI-----PDHDVLLAGFPCQPFSQAG 83 ++ DV++ G PCQ FSQ G Sbjct: 61 NVFCPYVGKIDVIIGGPPCQGFSQKG 86 >gi|462651|sp|P34906|MTF1_FUSNU RecName: Full=Modification methylase FnuDI; Short=M.FnuDI; AltName: Full=Cytosine-specific methyltransferase FnuDI gi|2961231|gb|AAC05695.1| FnuDI DNA modification methyltransferase [Fusobacterium nucleatum] Length = 344 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L E+ E ++E + +TY+ N LI DI +I + Sbjct: 1 MKLLSLFSGAGGLDLGFERA----GFEIIVANEYDKTIWETYEKNHKAKLIKKDIREILS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +++P D ++ G PCQ +S+AG Sbjct: 57 EELPKSDGIIGGPPCQSWSEAG 78 >gi|262381005|ref|ZP_06074143.1| site-specific DNA-methyltransferase [Bacteroides sp. 2_1_33B] gi|262296182|gb|EEY84112.1| site-specific DNA-methyltransferase [Bacteroides sp. 2_1_33B] Length = 306 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 9/80 (11%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP- 65 LF G+GG L E E F EIN + K + +FP ++ + DI + T P Sbjct: 6 LFSGVGGFDLAAEWM----GWENLFHCEINEWCQKVLRFHFPKSIQYDDITR--TDFTPW 59 Query: 66 --DHDVLLAGFPCQPFSQAG 83 DVL GFPCQPFS AG Sbjct: 60 RGKVDVLTGGFPCQPFSVAG 79 >gi|86159861|ref|YP_466646.1| DNA-cytosine methyltransferase [Anaeromyxobacter dehalogenans 2CP-C] gi|85776372|gb|ABC83209.1| DNA-cytosine methyltransferase [Anaeromyxobacter dehalogenans 2CP-C] Length = 380 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 7/84 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML + LF GIGG+ L + ++ +H + C E + + A FP GDI + Sbjct: 1 MLSVAGLFAGIGGLELGMARSGHHTKLLC----ENDACARAVLDARFPEVPKHGDIRTL- 55 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 + +P D ++ AGFPCQ SQAG Sbjct: 56 -ERLPKDTSLVTAGFPCQDLSQAG 78 >gi|323650451|gb|ADX97303.1| M.FseI [Frankia sp. Eul1b] Length = 374 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 6/80 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLFCG GG+ L Q + S + + S++T++ANFP I DI D Sbjct: 28 LIDLFCGAGGMTLGFMQA----GFQPILSIDHDLPSIETHRANFPGMSICTDIRDF--VD 81 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 P DV++ G PCQ FS+ G Sbjct: 82 FPSADVVVGGPPCQGFSRLG 101 >gi|312142618|ref|YP_003994064.1| DNA-cytosine methyltransferase [Halanaerobium sp. 'sapolanicus'] gi|311903269|gb|ADQ13710.1| DNA-cytosine methyltransferase [Halanaerobium sp. 'sapolanicus'] Length = 406 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 12/89 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFP-----NTLIF 53 + +LF G+GG RL LE++ + + ++ P ++ + Y NF N Sbjct: 5 VCELFAGVGGFRLGLEKS--SEEWKTVWMNQWEPTRKSQWAYECYIENFGKDKAINLFSN 62 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI+++ T IPDH++L+ GFPCQ +S A Sbjct: 63 TDISEVDTSVIPDHNLLVGGFPCQDYSVA 91 >gi|317181803|dbj|BAJ59587.1| Type II DNA modification enzyme [Helicobacter pylori F57] Length = 351 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKKTQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|150024829|ref|YP_001295655.1| modification methyltransferase Sau3AI [Flavobacterium psychrophilum JIP02/86] gi|149771370|emb|CAL42839.1| Probable modification methyltransferase Sau3AI [Flavobacterium psychrophilum JIP02/86] Length = 431 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 25/102 (24%) Query: 2 LKITDLFCGIGGIRLDLE------QTFNHR-----NVECFFSSEINP----------YSV 40 +K+ +LF G+GG RL LE + N++ + E +S++ P Y Sbjct: 5 IKVVELFAGVGGFRLGLEGWNNKSASSNYKENFESSYEIVWSNQWEPSTKVQHASMVYET 64 Query: 41 KTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 + + N N DI+ ++ IPDHD+L+ GFPCQ +S A Sbjct: 65 RWDKKNHCNQ----DISTVEVDIIPDHDLLVGGFPCQDYSVA 102 >gi|329123496|ref|ZP_08252060.1| modification methylase HaeIII [Haemophilus aegyptius ATCC 11116] gi|327471078|gb|EGF16533.1| modification methylase HaeIII [Haemophilus aegyptius ATCC 11116] Length = 133 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G GG+ L F ++E + KTY++N LI GDI+KI + Sbjct: 21 MNLISLFSGAGGLDLG----FQKAGFRIICANEYDKSIWKTYESNHSAKLIKGDISKISS 76 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + P D ++ G PCQ +S+ G Sbjct: 77 DEFPKCDGIIGGPPCQSWSEGG 98 >gi|124009653|ref|ZP_01694325.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134] gi|123984703|gb|EAY24688.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134] Length = 354 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 11/86 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF G+GG L Q NV F+ E NP+ + +P+T+ + DI + Sbjct: 1 MRHASLFSGLGGFDL-AAQRMGWTNV---FTVENNPFCQTILRHYWPDTIHYEDI---RQ 53 Query: 62 QDIPDH----DVLLAGFPCQPFSQAG 83 D H D+L GFPCQPFSQAG Sbjct: 54 TDFTPHYGQIDLLTGGFPCQPFSQAG 79 >gi|288922732|ref|ZP_06416903.1| C-5 cytosine-specific DNA methylase [Frankia sp. EUN1f] gi|288345909|gb|EFC80267.1| C-5 cytosine-specific DNA methylase [Frankia sp. EUN1f] Length = 174 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ L G GG+ L + Q R + ++ +P + + ++P+ GDI + Sbjct: 8 LRVGSLCSGYGGLDLAVHQVIGGR---LAWVADPDPGAARILARHWPDVPNHGDITAVDW 64 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + D+L AGFPCQP+S AG Sbjct: 65 TTVEPIDLLTAGFPCQPWSDAG 86 >gi|315574420|gb|EFU86611.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0309B] Length = 386 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIK--- 60 DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + + + DI + Sbjct: 9 DLFAGIGGFRLGMEQAGHH----CIGFCEIDDFARRSYKAIYDTSEEVEMYDITSVSDEF 64 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 Q + D+L GFPCQ FS AG Sbjct: 65 IQSLGPVDILCGGFPCQAFSIAG 87 >gi|294668765|ref|ZP_06733858.1| modification methylase BsuRI [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309282|gb|EFE50525.1| modification methylase BsuRI [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 313 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 9/85 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHR-NVECFFSSEINPYSVKTYQANFPNT-LIFGDIAK 58 M LF G GG T HR ++ +++I PY+ Y AN P T I D+ K Sbjct: 1 MATAVSLFSGCGG-----SDTGVHRLGIDILMANDIIPYARDVYLANLPQTDYILKDVRK 55 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 +++ P D+LL +PCQ FSQ G Sbjct: 56 LES--FPSADLLLGCYPCQGFSQGG 78 >gi|261839303|gb|ACX99068.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori 52] Length = 348 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKKTQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|188527268|ref|YP_001909955.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Shi470] gi|188143508|gb|ACD47925.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Shi470] Length = 348 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKETQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|317179147|dbj|BAJ56935.1| Type II DNA modification enzyme [Helicobacter pylori F30] Length = 351 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKETQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|227553877|ref|ZP_03983924.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis HH22] gi|307285310|ref|ZP_07565454.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0860] gi|227176989|gb|EEI57961.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis HH22] gi|306502887|gb|EFM72149.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0860] Length = 380 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIK--- 60 DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + + + DI + Sbjct: 5 DLFAGIGGFRLGMEQAGHH----CIGFCEIDDFARRSYKAIYDTSEEVEMYDITSVSDEF 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 Q + D+L GFPCQ FS AG Sbjct: 61 IQSLGPVDILCGGFPCQAFSIAG 83 >gi|325285907|ref|YP_004261697.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489] gi|324321361|gb|ADY28826.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489] Length = 414 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 K+ +LF G GG+ + LE+ ++C +EI+ ++ +T + N P+ ++ GDI Sbjct: 75 FKVLELFAGAGGLAVGLEKA----GIKCVALNEIDKWACQTLRENRPHWNVLEGDIKSFN 130 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 + + D++ GFPCQ FS AG Sbjct: 131 FSEYNNQVDIVTGGFPCQAFSYAG 154 >gi|315586449|gb|ADU40830.1| possible DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A] Length = 351 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H + E ++++I+ ++ +YQAN T I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPHFELIWANDIDKDAILSYQANHRKTQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 + P D+LL G PCQ +S G Sbjct: 58 NCHNFPCVSIDILLGGPPCQSYSTLG 83 >gi|315580106|gb|EFU92297.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0309A] Length = 382 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIK--- 60 DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + + + DI + Sbjct: 5 DLFAGIGGFRLGMEQAGHH----CIGFCEIDDFARRSYKAIYDTSEEVEMYDITSVSDEF 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 Q + D+L GFPCQ FS AG Sbjct: 61 IQSLGPVDILCGGFPCQAFSIAG 83 >gi|296448772|ref|ZP_06890624.1| DNA-cytosine methyltransferase [Methylosinus trichosporium OB3b] gi|296253709|gb|EFH00884.1| DNA-cytosine methyltransferase [Methylosinus trichosporium OB3b] Length = 297 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K LF GIGG+ L L + + EC +E P + A FP GDIA ++ Sbjct: 1 MKTVGLFAGIGGLELGLARAGH----ECLLVAENWPLAAGVLAARFPGLPNAGDIASLRR 56 Query: 62 QDIPD-HDVLLAGFPCQPFSQAG 83 +P +++ AGFPCQ SQAG Sbjct: 57 --LPGGTELVAAGFPCQDLSQAG 77 >gi|227517066|ref|ZP_03947115.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0104] gi|255975250|ref|ZP_05425836.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T2] gi|227075490|gb|EEI13453.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0104] gi|255968122|gb|EET98744.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T2] Length = 384 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIK--- 60 DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + + + DI + Sbjct: 9 DLFAGIGGFRLGMEQAGHH----CIGFCEIDDFARRSYKAIYDTSEEVEMYDITSVSDEF 64 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 Q + D+L GFPCQ FS AG Sbjct: 65 IQSLGPVDILCGGFPCQAFSIAG 87 >gi|332361999|gb|EGJ39801.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus sanguinis SK49] Length = 480 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGG RL +E + H EC EI+ ++ ++Y++ F G+I Sbjct: 29 MKFIDLFSGIGGFRLGME-SVGH---ECIGFCEIDKFARESYKSIFQTE---GEIEFHDI 81 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 +D+ D D++ GFPCQ FS AG Sbjct: 82 RDVSDDEFKKLRGKVDIICGGFPCQAFSIAG 112 >gi|327474139|gb|EGF19549.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus sanguinis SK408] Length = 480 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF GIGG RL +E + H EC EI+ ++ ++Y++ F G+I Sbjct: 29 LRFIDLFSGIGGFRLGME-SVGH---ECIGFCEIDKFARESYKSIFQTE---GEIEFHDI 81 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 +D+ D D++ GFPCQ FS AG Sbjct: 82 RDVSDDEFKKLRGKVDIICGGFPCQAFSIAG 112 >gi|317012300|gb|ADU82908.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Lithuania75] Length = 348 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKKTQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 DCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|126700764|ref|YP_001089661.1| putative DNA-methyltransferase [Clostridium difficile 630] gi|115252201|emb|CAJ70040.1| putative DNA-methyltransferase [Clostridium difficile] Length = 541 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M + DLF G GG+ L E T N+ F E N + KTY N P+ + DI ++ Sbjct: 1 MYNVIDLFAGAGGLSLGFEMT-KKFNMVAFV--EKNDNAAKTYLENHPSVKRYCDIKRLD 57 Query: 61 TQDIPDH----DVLLAGFPCQPFSQA 82 QDI + DV++ G PCQ FS A Sbjct: 58 FQDILNSVDKIDVVIGGPPCQGFSNA 83 >gi|317180646|dbj|BAJ58432.1| Type II DNA modification enzyme [Helicobacter pylori F32] Length = 348 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKETQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 DCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|303274236|ref|XP_003056440.1| cytosine-specific DNA methylase [Micromonas pusilla CCMP1545] gi|226462524|gb|EEH59816.1| cytosine-specific DNA methylase [Micromonas pusilla CCMP1545] Length = 1085 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 7/82 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K LF GIGG+ L LE+ + E E +P+ V+ Q FP + D+A+++ Sbjct: 1 MKTVSLFSGIGGLDLGLEEAGH----EVILQVENDPHCVQVLQRQFPGKALARDVAEVR- 55 Query: 62 QDIPDH-DVLLAGFPCQPFSQA 82 D+P+ ++L AGFPC S + Sbjct: 56 -DLPEETELLAAGFPCPDVSTS 76 >gi|91215328|ref|ZP_01252299.1| modification methylase (Eco47II, Sau96I) [Psychroflexus torquis ATCC 700755] gi|91186280|gb|EAS72652.1| modification methylase (Eco47II, Sau96I) [Psychroflexus torquis ATCC 700755] Length = 412 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 6/82 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + +LF G GG+ + LEQ+ ++C +EI+ ++ +T + N P+ ++ GDI + Sbjct: 78 VLELFAGAGGLAIGLEQS----GIKCTALNEIDKWACQTLRTNRPSWNILEGDIKNFDFR 133 Query: 63 DIPDH-DVLLAGFPCQPFSQAG 83 + D++ GFPCQ FS AG Sbjct: 134 QYENKVDIVTGGFPCQAFSYAG 155 >gi|322385307|ref|ZP_08058952.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus cristatus ATCC 51100] gi|321270566|gb|EFX53481.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus cristatus ATCC 51100] Length = 480 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL +E + H EC EI+ ++ ++Y++ F G+I Sbjct: 29 MRFIDLFSGIGGFRLGME-SVGH---ECIGFCEIDKFARESYKSIFQTE---GEIEFHDI 81 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 +D+ D DV+ GFPCQ FS AG Sbjct: 82 RDVSDDEFKKLRGKVDVICGGFPCQAFSIAG 112 >gi|158320884|ref|YP_001513391.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs] gi|158141083|gb|ABW19395.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs] Length = 329 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L E+ + ++E + +TY+ N LI GDI +I + Sbjct: 1 MKLISLFSGAGGMDLGFEKA----GFKVIAANEYDKTIWETYEKNHNAPLIKGDIREIAS 56 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 D PD D ++ G PCQ +S+AG Sbjct: 57 GDFPDDCDGIIGGPPCQSWSEAG 79 >gi|317009105|gb|ADU79685.1| type II DNA modification [Helicobacter pylori India7] Length = 348 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFS---THPYFELIWANDIDKDAILSYQANHKEAQTILCDIAQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83 >gi|310830456|ref|YP_003965557.1| Cytosine-specific methyltransferase [Paenibacillus polymyxa SC2] gi|309249923|gb|ADO59489.1| Cytosine-specific methyltransferase [Paenibacillus polymyxa SC2] Length = 156 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + DLFCG G F + + + Y+V TY N N I +I + + Sbjct: 36 LTMIDLFCGAG----IGASGFLLAGYKIISAVDNQKYAVDTYNRNIENHAICANIRFLNS 91 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++PD DV+ GFPCQPFS +G Sbjct: 92 NELPDADVISGGFPCQPFSFSG 113 >gi|238801891|ref|YP_002925094.1| putative DNA methylase [Streptococcus phage 5093] gi|238558577|gb|ACR45907.1| putative DNA methylase [Streptococcus phage 5093] Length = 319 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A N + DI ++ Sbjct: 1 MKFIDLFAGIGGFRLGMESAGH----ECVGFCEIDKFARASYKAIHNTEGEIELHDITQV 56 Query: 60 ---KTQDIPDHDVLLAGFPCQPFSQAG 83 + ++I D + GFPCQ FS AG Sbjct: 57 TDDEIREIGHVDAICGGFPCQAFSIAG 83 >gi|325288246|ref|YP_004264427.1| C-5 cytosine-specific DNA methylase [Syntrophobotulus glycolicus DSM 8271] gi|324963647|gb|ADY54426.1| C-5 cytosine-specific DNA methylase [Syntrophobotulus glycolicus DSM 8271] Length = 90 Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+ + LF GIGG L H + ++SEI + ++ + FP L GDI K+ Sbjct: 1 MMTMGSLFDGIGGFPL----VAVHNGITPLWASEIEAFPIEVTKIRFPEMLHVGDITKLD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81 +P DV+ G PCQ +++ Sbjct: 57 GAALPLVDVICGGSPCQDYAE 77 >gi|323512819|gb|ADX88273.1| putative DNA-methyltransferase, type II restriction-modification system (Enterobacteria phage RB16) [Vibrio phage ICP1_2006_D] gi|323513047|gb|ADX88500.1| putative DNA-methyltransferase, type II restriction-modification system (Enterobacteria phage RB16) [Vibrio phage ICP1_2006_C] Length = 332 Score = 50.1 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G+ R+ LE+ V +++SEI+ ++K QAN+P+ + GD+ K + Sbjct: 1 MNVLSLFDGMACCRIALERA--GIQVGNYYASEIDKNAIKVAQANWPDNIQLGDVTKWQE 58 Query: 62 Q--DIPDHDVLLAGFPCQPFSQAG 83 D D++ GFPCQ +S AG Sbjct: 59 WGIDWASIDLVTGGFPCQAWSIAG 82 >gi|312386601|emb|CBY05924.1| putative DNA methylase [Streptococcus pneumoniae] Length = 452 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL +E + H EC EI+ ++ ++Y++ F G+I Sbjct: 1 MRFIDLFSGIGGFRLGME-SVGH---ECIGFCEIDKFARESYKSIFQTE---GEIEFHDI 53 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 +D+ D DV+ GFPCQ FS AG Sbjct: 54 RDVSDDEFKKLRGKVDVICGGFPCQAFSIAG 84 >gi|311977245|gb|ADQ20501.1| M2.BfuAI [Lysinibacillus fusiformis] Length = 342 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 17/92 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55 +K+ DLFCG GG+ L F E + + NP KT++ NFP F D Sbjct: 1 MKVVDLFCGAGGLHLG----FQEAGFEIKLAVDSNPIVAKTHEFNFPEIPFFSDDINQLT 56 Query: 56 ----IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I+ ++I DVL+ G PCQ FS G Sbjct: 57 GFELFNLIEGEEI---DVLIGGPPCQGFSTIG 85 >gi|169832810|ref|YP_001694558.1| methyl transferase [Streptococcus pneumoniae Hungary19A-6] gi|168995312|gb|ACA35924.1| methyl transferase [Streptococcus pneumoniae Hungary19A-6] Length = 452 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL +E + H EC EI+ ++ ++Y++ F G+I Sbjct: 1 MRFIDLFSGIGGFRLGME-SVGH---ECIGFCEIDKFARESYKSIFQTE---GEIEFHDI 53 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 +D+ D DV+ GFPCQ FS AG Sbjct: 54 RDVSDDEFKKLRGKVDVICGGFPCQAFSIAG 84 >gi|168821212|ref|ZP_02833212.1| modification methylase HaeIII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205342142|gb|EDZ28906.1| modification methylase HaeIII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088731|emb|CBY98489.1| C-5 cytosine-specific DNA methylase family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 361 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 +++ LF G GG+ + + F++++ + KT FP+T I GDI++I Sbjct: 12 IRVLSLFSGCGGMDFGITSAGG----DIVFANDVVENACKTLGNYFPDTDIRHGDISQI- 66 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 Q PD D+++ G+PCQ FS AG Sbjct: 67 -QSFPDVDIVVGGYPCQSFSMAG 88 >gi|229187780|ref|ZP_04314910.1| Cytosine-specific methyltransferase [Bacillus cereus BGSC 6E1] gi|228595683|gb|EEK53373.1| Cytosine-specific methyltransferase [Bacillus cereus BGSC 6E1] Length = 365 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 L DLF GIGG RL +E H+ C EI+ ++ K+Y+A N DI + Sbjct: 3 LTFIDLFAGIGGFRLGMEAA-GHK---CLGYVEIDKFARKSYEAIHNTKGEWTAHDITTV 58 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 D+ DV+ GFPCQ FS AG Sbjct: 59 TNDDLRLLRGTVDVICGGFPCQAFSIAG 86 >gi|319776343|ref|YP_004138831.1| Modification methylase HaeIII [Haemophilus influenzae F3047] gi|127460|sp|P20589|MTH3_HAEAE RecName: Full=Modification methylase HaeIII; Short=M.HaeIII; AltName: Full=Cytosine-specific methyltransferase HaeIII gi|148915|gb|AAA24970.1| methyltransferase [Haemophilus aegyptius] gi|2961233|gb|AAC05696.1| HaeIII DNA modification methyltransferase [Haemophilus influenzae biotype aegyptius] gi|317450934|emb|CBY87160.1| Modification methylase HaeIII [Haemophilus influenzae F3047] Length = 330 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G GG+ L ++ ++E + KTY++N LI GDI+KI + Sbjct: 1 MNLISLFSGAGGLDLGFQKA----GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + P D ++ G PCQ +S+ G Sbjct: 57 DEFPKCDGIIGGPPCQSWSEGG 78 >gi|326204903|ref|ZP_08194756.1| DNA-cytosine methyltransferase [Clostridium papyrosolvens DSM 2782] gi|325984952|gb|EGD45795.1| DNA-cytosine methyltransferase [Clostridium papyrosolvens DSM 2782] Length = 569 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRL-DLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + + LF GIGG + + Q F ++SEI + + + FP L GDI K+K Sbjct: 5 ITVGSLFDGIGGFPMAGIRQGFIP-----VWASEIEAFPIAVTKLRFPQMLHVGDITKLK 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + +P DV+ G PCQ S AG Sbjct: 60 GETLPQVDVVCGGSPCQDLSVAG 82 >gi|319897026|ref|YP_004135221.1| modification methylase haeiii [Haemophilus influenzae F3031] gi|317432530|emb|CBY80890.1| Modification methylase HaeIII [Haemophilus influenzae F3031] Length = 330 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G GG+ L ++ ++E + KTY++N LI GDI+KI + Sbjct: 1 MNLISLFSGAGGLDLGFQKA----GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + P D ++ G PCQ +S+ G Sbjct: 57 DEFPKCDGIIGGPPCQSWSEGG 78 >gi|157265308|ref|YP_001467867.1| C5 cytosine-specific DNA methylase [Thermus phage P23-45] gi|157265426|ref|YP_001467984.1| C5 cytosine-specific DNA methylase [Thermus phage P74-26] gi|156905203|gb|ABU96847.1| C5 cytosine-specific DNA methylase [Thermus phage P23-45] gi|156905321|gb|ABU96964.1| C5 cytosine-specific DNA methylase [Thermus phage P74-26] Length = 368 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 7/87 (8%) Query: 4 ITDLFCGIGGIRLD-------LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI 56 + LF G GG+ L L +T+ + + + N +V TY AN D+ Sbjct: 10 VLSLFSGAGGMDLGFTGGFTFLGKTYPRTGFKVVKAYDNNRRAVDTYNANLDPVAELKDV 69 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ +IP DV++ GFPCQ FS AG Sbjct: 70 TTLQDHEIPSVDVVIGGFPCQDFSLAG 96 >gi|291543312|emb|CBL16421.1| DNA-methyltransferase (dcm) [Ruminococcus sp. 18P13] Length = 668 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L + ++ + SEI PY+V P+ +GD++K+ Sbjct: 6 LTLGSLFSGSGGFEL----AGIYAGIKPVWLSEIEPYAVLVTHNRLPDVKHYGDVSKLSG 61 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+P D++ G PCQ S AG Sbjct: 62 ADLPPVDIITFGSPCQDMSIAG 83 >gi|210134686|ref|YP_002301125.1| type II R-M system methyltransferase [Helicobacter pylori P12] gi|210132654|gb|ACJ07645.1| type II R-M system methyltransferase [Helicobacter pylori P12] Length = 160 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ + H + E ++++I+ ++ +YQAN I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSK---HPHFELIWANDIDKDAILSYQANHKEAQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83 >gi|1127162|pdb|1DCT|A Chain A, Dna (Cytosine-5) Methylase From Haeiii Covalently Bound To Dna gi|1127163|pdb|1DCT|B Chain B, Dna (Cytosine-5) Methylase From Haeiii Covalently Bound To Dna Length = 324 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G GG+ L ++ ++E + KTY++N LI GDI+KI + Sbjct: 1 MNLISLFSGAGGLDLGFQKA----GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + P D ++ G PCQ +S+ G Sbjct: 57 DEFPKCDGIIGGPPCQSWSEGG 78 >gi|240118874|ref|ZP_04732936.1| DcmB [Neisseria gonorrhoeae PID1] Length = 325 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 6/79 (7%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDIP 65 +F G GG+ L E+ E ++E + T++AN P T LI GDI KIK +D P Sbjct: 1 MFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIKEEDFP 56 Query: 66 DH-DVLLAGFPCQPFSQAG 83 + D ++ G PCQ +S+AG Sbjct: 57 EEIDGIIGGPPCQSWSEAG 75 >gi|240081638|ref|ZP_04726181.1| DcmB [Neisseria gonorrhoeae FA19] gi|240113919|ref|ZP_04728409.1| DcmB [Neisseria gonorrhoeae MS11] gi|240116652|ref|ZP_04730714.1| DcmB [Neisseria gonorrhoeae PID18] gi|240129088|ref|ZP_04741749.1| DcmB [Neisseria gonorrhoeae SK-93-1035] Length = 325 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 6/79 (7%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDIP 65 +F G GG+ L E+ E ++E + T++AN P T LI GDI KIK +D P Sbjct: 1 MFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIKEEDFP 56 Query: 66 DH-DVLLAGFPCQPFSQAG 83 + D ++ G PCQ +S+AG Sbjct: 57 EEIDGIIGGPPCQSWSEAG 75 >gi|254779148|ref|YP_003057253.1| M. Hpy99XI, type II cytosine specific DNA methyltransferase [Helicobacter pylori B38] gi|254001059|emb|CAX29005.1| M. Hpy99XI, type II cytosine specific DNA methyltransferase [Helicobacter pylori B38] Length = 348 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H + E ++++I+ ++ +YQAN I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSV---HSHFELIWANDIDKDAILSYQANHKEVQTILCDIVQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPRVSIDILLGGPPCQSYSTLG 83 >gi|183217290|gb|ACC59209.1| methyltransferase [Streptococcus pneumoniae] gi|321156848|emb|CBW38835.1| putative DNA methylase [Streptococcus pneumoniae] Length = 452 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL +E + H EC EI+ ++ ++Y++ F G+I Sbjct: 1 MRFIDLFSGIGGFRLGME-SVGH---ECIGFCEIDKFARESYKSIFQTE---GEIEFHDI 53 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 +D+ D DV+ GFPCQ FS AG Sbjct: 54 RDVSDDEFKKLRGKVDVICGGFPCQAFSIAG 84 >gi|255972594|ref|ZP_05423180.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T1] gi|256762698|ref|ZP_05503278.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T3] gi|257422413|ref|ZP_05599403.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis X98] gi|255963612|gb|EET96088.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T1] gi|256683949|gb|EEU23644.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T3] gi|257164237|gb|EEU94197.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis X98] Length = 351 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A T + DI I Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----ECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56 Query: 60 KTQ---DIPDHDVLLAGFPCQPFSQAG 83 + I DV+ GFPCQ FS AG Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83 >gi|4063721|gb|AAC98421.1| methyl transferase [Streptococcus pneumoniae] Length = 452 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL +E + H EC EI+ ++ ++Y++ F G+I Sbjct: 1 MRFIDLFSGIGGFRLGME-SVGH---ECIGFCEIDKFARESYKSIFQTE---GEIEFHDI 53 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 +D+ D DV+ GFPCQ FS AG Sbjct: 54 RDVSDDEFKKLRGKVDVICGGFPCQAFSIAG 84 >gi|254413040|ref|ZP_05026812.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196180204|gb|EDX75196.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 355 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 7/82 (8%) Query: 4 ITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKT 61 I LF G GG+ L Q FN +++E + +TYQ+N PNT + DI + + Sbjct: 11 IVSLFSGCGGLDLGFRQAGFN-----VVWANEYDKDIWQTYQSNHPNTFLDRRDIRHVPS 65 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPD ++ G PCQ +S+AG Sbjct: 66 ADIPDCFGIVGGPPCQSWSEAG 87 >gi|332075476|gb|EGI85945.1| modification methylase HpaII [Streptococcus pneumoniae GA41301] Length = 452 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL +E + H EC EI+ ++ ++Y++ F G+I Sbjct: 1 MRFIDLFSGIGGFRLGME-SVGH---ECIGFCEIDKFARESYKSIFQTE---GEIEFHDI 53 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 +D+ D DV+ GFPCQ FS AG Sbjct: 54 RDVSDDEFKKLRGEVDVICGGFPCQAFSIAG 84 >gi|20530828|gb|AAM27270.1|AF507962_1 methyl transferase [Lactococcus lactis] Length = 185 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K DLF GIGG RL LEQ + EC EI+ ++ ++Y+A N + DI + Sbjct: 1 MKFLDLFAGIGGFRLGLEQAGH----ECVGFCEIDKFARQSYKAIHNTEGEREYHDITTV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 ++ +++ GFPCQ FS AG Sbjct: 57 SNEEWRTLRGTVELICGGFPCQSFSIAG 84 >gi|30089875|ref|NP_839905.1| putative methylase [Lactococcus phage P335 sensu lato] gi|21954664|gb|AAM83053.1|AF489521_14 putative methylase [Lactococcus phage 4268] Length = 185 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K DLF GIGG RL LEQ + EC EI+ ++ ++Y+A N + DI + Sbjct: 1 MKFLDLFAGIGGFRLGLEQAGH----ECVGFCEIDKFARQSYKAIHNTEGEREYHDITTV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 ++ +++ GFPCQ FS AG Sbjct: 57 SNEEWRTLRGTVELICGGFPCQAFSIAG 84 >gi|168205340|ref|ZP_02631345.1| putative modification methylase Eco47II [Clostridium perfringens E str. JGS1987] gi|170663208|gb|EDT15891.1| putative modification methylase Eco47II [Clostridium perfringens E str. JGS1987] Length = 437 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNH-RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ++++ +F G G L+ F+ ++ + F+S+I + ++Y+ N N ++ I +I Sbjct: 118 IIRVVSMFSGAGM----LDYAFHKDQDFKIVFASDIMKEACESYRENIGNHIVNKSITEI 173 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 + +IP DV+L G PC+PFS A Sbjct: 174 NSNEIPVADVILGGVPCKPFSNA 196 >gi|126659133|ref|ZP_01730272.1| site-specific DNA-methyltransferase M.NgoVII [Cyanothece sp. CCY0110] gi|126619540|gb|EAZ90270.1| site-specific DNA-methyltransferase M.NgoVII [Cyanothece sp. CCY0110] Length = 346 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 37/59 (62%) Query: 22 FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80 F + + ++++I+ + +TY+ N N ++ DIA I +DIP D+++ GFPCQ FS Sbjct: 5 FVNAGYKIIWANDIDSDACQTYKNNIGNHIVKSDIANINLKDIPKCDIIIGGFPCQDFS 63 >gi|288906872|emb|CBJ21706.1| type II DNA modification methyltransferase [Streptococcus mitis B6] Length = 380 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K DLF GIGG RL +E H+ C EI+ ++ ++Y+A N + DI + Sbjct: 1 MKFLDLFAGIGGFRLGMESA-GHK---CIGFCEIDKFARESYKAIHNTKGEIELHDITAV 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I D++ GFPCQ FS AG Sbjct: 57 SDESIRGIGSVDIICGGFPCQAFSIAG 83 >gi|113478170|ref|YP_724231.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] gi|110169218|gb|ABG53758.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] Length = 379 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 4/78 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L F++ + ++ + + Y+ +T++ N N + I I Sbjct: 16 KIISLFSGCGGMDL----PFHYTGFKLVWAIDSDLYACRTFRRNISNIIENNQIENINIA 71 Query: 63 DIPDHDVLLAGFPCQPFS 80 ++P+ D+++ GFPCQ FS Sbjct: 72 EVPEADLIIGGFPCQDFS 89 >gi|218133430|ref|ZP_03462234.1| hypothetical protein BACPEC_01295 [Bacteroides pectinophilus ATCC 43243] gi|217990805|gb|EEC56811.1| hypothetical protein BACPEC_01295 [Bacteroides pectinophilus ATCC 43243] Length = 320 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKIKTQD 63 DL GIGG RL LE T H+ C E + ++ +Y+A + + D+ K+K +D Sbjct: 8 DLCSGIGGFRLGLE-TAGHK---CIGYCEYDKFARASYEAMYDTEGEWKAHDVTKLKPED 63 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+ GFPCQ S AG Sbjct: 64 VPYADIWCFGFPCQDISVAG 83 >gi|154504826|ref|ZP_02041564.1| hypothetical protein RUMGNA_02336 [Ruminococcus gnavus ATCC 29149] gi|153794709|gb|EDN77129.1| hypothetical protein RUMGNA_02336 [Ruminococcus gnavus ATCC 29149] Length = 422 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKIKTQD 63 DL GIGG RL LE T H+ C E + ++ +Y+A + + D+ K+K +D Sbjct: 8 DLCSGIGGFRLGLE-TAGHK---CIGYCEYDKFARASYEAMYDTEGEWKAHDVTKLKPED 63 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+ GFPCQ S AG Sbjct: 64 VPYADIWCFGFPCQDISVAG 83 >gi|15897209|ref|NP_341814.1| DNA modification methylase, type II R/M system [Sulfolobus solfataricus P2] gi|284174455|ref|ZP_06388424.1| DNA modification methylase, type II R/M system [Sulfolobus solfataricus 98/2] gi|13813404|gb|AAK40604.1| DNA modification methylase, type II R/M system [Sulfolobus solfataricus P2] gi|261601877|gb|ACX91480.1| DNA-cytosine methyltransferase [Sulfolobus solfataricus 98/2] Length = 325 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 ++KI DLF G GG L F +E + +IN + +TY NFPNT++ DI +I Sbjct: 3 LIKIIDLFSGAGGFSL----GFKKLGIEPKLAIDINHAATRTYSLNFPNTIVIEDDIREI 58 Query: 60 KTQDI-----PDHDVLLAGFPCQPFSQA 82 +I D DV++ G PC+ ++ A Sbjct: 59 SGGEILKNVGNDIDVVIGGPPCEGYTAA 86 >gi|62390655|ref|YP_226057.1| modification methylase [Corynebacterium glutamicum ATCC 13032] gi|21324545|dbj|BAB99169.1| Site-specific DNA methylase or type II 5-cytosine methyltransferase [Corynebacterium glutamicum ATCC 13032] gi|41325993|emb|CAF20156.1| MODIFICATION METHYLASE [Corynebacterium glutamicum ATCC 13032] Length = 363 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 7/80 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK--T 61 I F G GG+ L L++ + ++++ + +V+TY+ N + ++ GDI +I T Sbjct: 7 IVSTFSGCGGLDLGLQEV----GFDPIWANDFSEEAVQTYKHNIGDHIVHGDITEIDPFT 62 Query: 62 QD-IPDHDVLLAGFPCQPFS 80 D IPD D++ GFPCQ FS Sbjct: 63 DDTIPDGDLVTGGFPCQDFS 82 >gi|321156918|emb|CBW38908.1| putative DNA methylase [Streptococcus pneumoniae] Length = 452 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL +E + H EC EI+ ++ ++Y++ F G+I Sbjct: 1 MRFIDLFSGIGGFRLGME-SVGH---ECIGFCEIDKFARESYKSIFQTE---GEIEFHDI 53 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 +D+ D D++ GFPCQ FS AG Sbjct: 54 RDVSDDEFKKLRGKVDIICGGFPCQAFSIAG 84 >gi|332652901|ref|ZP_08418646.1| DNA (cytosine-5-)-methyltransferase [Ruminococcaceae bacterium D16] gi|332518047|gb|EGJ47650.1| DNA (cytosine-5-)-methyltransferase [Ruminococcaceae bacterium D16] Length = 542 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 7/81 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF G GG+ L QT + +++ F E +PY +TY+ N P + GD+ +DI Sbjct: 8 DLFAGAGGLSLGFMQTQKY-DIKVAF--ENSPYMQETYRQNHPGVEVQGDVCTADYEDIM 64 Query: 66 DH----DVLLAGFPCQPFSQA 82 DV++ G PCQ FS A Sbjct: 65 RRYGKIDVVIGGPPCQGFSNA 85 >gi|1808696|gb|AAC00045.1| putative type II 5-cytosoine methyltransferase [Corynebacterium glutamicum] Length = 363 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 7/80 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK--T 61 I F G GG+ L L++ + ++++ + +V+TY+ N + ++ GDI +I T Sbjct: 7 IVSTFSGCGGLDLGLQEV----GFDPIWANDFSEEAVQTYKHNIGDHIVHGDITEIDPFT 62 Query: 62 QD-IPDHDVLLAGFPCQPFS 80 D IPD D++ GFPCQ FS Sbjct: 63 DDTIPDGDLVTGGFPCQDFS 82 >gi|310657624|ref|YP_003935345.1| cytosine-specific methyltransferase [Clostridium sticklandii DSM 519] gi|308824402|emb|CBH20440.1| Cytosine-specific methyltransferase [Clostridium sticklandii] Length = 326 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 7/84 (8%) Query: 4 ITDLFCGIGGIRLDL-------EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI 56 + LFCG GG + L + ++ ++E ++++I+ + + ++ NF DI Sbjct: 1 MASLFCGCGGTDVGLLGGFKFLDNSYAKNDMEIVYANDIDINACRIFEENFDIMPDNRDI 60 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFS 80 ++ + ++P+ D+L GFPCQ FS Sbjct: 61 REVASNELPEFDILTGGFPCQSFS 84 >gi|146305026|ref|YP_001192342.1| DNA-cytosine methyltransferase [Metallosphaera sedula DSM 5348] gi|145703276|gb|ABP96418.1| DNA-cytosine methyltransferase [Metallosphaera sedula DSM 5348] Length = 313 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 10/86 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT 61 K+ DLF G GG + F + + EIN + +TY ANFP T++ DI +I Sbjct: 5 KVVDLFSGAGG----FGRGFKEVGFQIGVAVEINHAAARTYSANFPTTIVLEEDIREITG 60 Query: 62 QDI-----PDHDVLLAGFPCQPFSQA 82 ++I + DV++ PC+PF+ A Sbjct: 61 REIVREIGKEPDVVIGSPPCEPFTAA 86 >gi|261837889|gb|ACX97655.1| type II m5C methylase [Helicobacter pylori 51] Length = 348 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDNDAILSYQANHKETQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 DCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|228969065|ref|ZP_04129983.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar sotto str. T04001] gi|228790631|gb|EEM38314.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar sotto str. T04001] Length = 326 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 L DLF GIGG RL +EQ H+ C E + ++ K+Y+A N DI + Sbjct: 3 LTFIDLFAGIGGFRLGMEQA-GHK---CLGYVEWDKFARKSYEAIHNTKGEWTEHDITTV 58 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 D+ DV+ GFPCQ FS AG Sbjct: 59 TNDDLRLFRGQVDVICGGFPCQAFSIAG 86 >gi|154497795|ref|ZP_02036173.1| hypothetical protein BACCAP_01773 [Bacteroides capillosus ATCC 29799] gi|150273293|gb|EDN00438.1| hypothetical protein BACCAP_01773 [Bacteroides capillosus ATCC 29799] Length = 222 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAKIKTQD 63 +F GIGG R L + +C EI+ Y+ +Y+A + D +I D Sbjct: 1 MFAGIGGFRAGLARAGG---FQCVGHCEIDKYADASYRAIHDIREEERYYPDAREIDPGD 57 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +PD D+L GFPCQ FS AG Sbjct: 58 LPDFDLLCGGFPCQAFSLAG 77 >gi|15616070|ref|NP_244375.1| cytosine-specific methyltransferase [Bacillus halodurans C-125] gi|10176132|dbj|BAB07227.1| cytosine-specific methyltransferase [Bacillus halodurans C-125] Length = 326 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 4/77 (5%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF G GG+ + E+ + ++++I+ + T++ ++ GDI+KI IP Sbjct: 11 LFSGAGGLDMGFERI----GFKIIWANDIDEDACATHRLWSDAEVVQGDISKIDVSTIPS 66 Query: 67 HDVLLAGFPCQPFSQAG 83 D+LL G+PCQ FS AG Sbjct: 67 ADILLGGWPCQGFSLAG 83 >gi|315162212|gb|EFU06229.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0645] Length = 398 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A T + DI I Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----ECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56 Query: 60 KTQ---DIPDHDVLLAGFPCQPFSQAG 83 + I DV+ GFPCQ FS AG Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83 >gi|315035876|gb|EFT47808.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0027] Length = 298 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A T + DI I Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----ECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56 Query: 60 KTQ---DIPDHDVLLAGFPCQPFSQAG 83 + +I DV+ GFPCQ FS AG Sbjct: 57 SDEFIREIGSVDVICGGFPCQAFSIAG 83 >gi|182684309|ref|YP_001836056.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae CGSP14] gi|221232093|ref|YP_002511246.1| DNA methylase [Streptococcus pneumoniae ATCC 700669] gi|182629643|gb|ACB90591.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae CGSP14] gi|220674554|emb|CAR69117.1| putative DNA methylase [Streptococcus pneumoniae ATCC 700669] Length = 452 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL +E + H EC EI+ ++ ++Y++ F G+I Sbjct: 1 MRFIDLFSGIGGFRLGME-SVGH---ECIGFCEIDKFARESYKSIFQTE---GEIEFHDI 53 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 +D+ D D++ GFPCQ FS AG Sbjct: 54 RDVSDDEFKKLRGKVDIICGGFPCQAFSIAG 84 >gi|111220172|ref|YP_710966.1| putative DNA modification methylase [Frankia alni ACN14a] gi|111147704|emb|CAJ59362.1| putative DNA Modification methylase (Cytosine-specific methyltransferase) [Frankia alni ACN14a] Length = 401 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 I DLFCG GG+ L Q + + + S+ T++ANFP + DI + D Sbjct: 57 IIDLFCGAGGMSLGFVQA----GFSPILAIDHDQPSIDTHRANFPGDSLCVDIRDV--SD 110 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 P DV++ G PCQ FS+ G Sbjct: 111 FPAADVVIGGPPCQGFSRLG 130 >gi|307290179|ref|ZP_07570098.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0411] gi|306498807|gb|EFM68305.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0411] Length = 416 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A T + DI I Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----ECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56 Query: 60 KTQ---DIPDHDVLLAGFPCQPFSQAG 83 + I DV+ GFPCQ FS AG Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83 >gi|257081612|ref|ZP_05575973.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis E1Sol] gi|256989642|gb|EEU76944.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis E1Sol] Length = 398 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A T + DI I Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----ECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56 Query: 60 KTQ---DIPDHDVLLAGFPCQPFSQAG 83 + I DV+ GFPCQ FS AG Sbjct: 57 SDEFIRRIGSVDVICGGFPCQAFSIAG 83 >gi|225863800|ref|YP_002749178.1| cytosine-specific methyltransferase NlaX [Bacillus cereus 03BB102] gi|225788166|gb|ACO28383.1| cytosine-specific methyltransferase NlaX [Bacillus cereus 03BB102] Length = 576 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 + DLF GIGG RL +EQ H+ C E + ++ K+Y+A N DI + Sbjct: 1 MNFIDLFAGIGGFRLGMEQA-GHK---CLGYVEKDKFARKSYEAIHNTKGEWTAHDITAV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 D+ DV+ GFPCQ FS AG Sbjct: 57 TNDDLRLLRGQVDVICGGFPCQAFSIAG 84 >gi|208434405|ref|YP_002266071.1| type II DNA modification enzyme [Helicobacter pylori G27] gi|208432334|gb|ACI27205.1| type II DNA modification enzyme [Helicobacter pylori G27] Length = 348 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFSI---HPYFELIWANDIDRDAILSYQANHKEAQTILCDIAQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|323484104|ref|ZP_08089474.1| hypothetical protein HMPREF9474_01225 [Clostridium symbiosum WAL-14163] gi|323402546|gb|EGA94874.1| hypothetical protein HMPREF9474_01225 [Clostridium symbiosum WAL-14163] Length = 430 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 L DL GIGG RL LE H+ C E + Y+ +Y+A + D+ K+ Sbjct: 4 LTFLDLCSGIGGFRLGLEAA-GHK---CIGYCEYDKYARASYEAMYDAKGEWKADDVTKL 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K DIP D+ GFPCQ S AG Sbjct: 60 KPGDIPYADIWTFGFPCQDISIAG 83 >gi|124004276|ref|ZP_01689122.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134] gi|123990346|gb|EAY29845.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134] Length = 391 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 11/86 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF G+GG L E+ NV F+ E NP+ + +P+T + DI + Sbjct: 1 MRHASLFSGMGGFDLAAER-MGWVNV---FTVENNPFCQTILRHYWPDTTHYEDI---RQ 53 Query: 62 QDIPDH----DVLLAGFPCQPFSQAG 83 D H D+L GFPCQPFSQAG Sbjct: 54 TDFTPHYGQIDLLTGGFPCQPFSQAG 79 >gi|251811836|ref|ZP_04826309.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis BCM-HMP0060] gi|282875124|ref|ZP_06283997.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis SK135] gi|251804633|gb|EES57290.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis BCM-HMP0060] gi|281295889|gb|EFA88410.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis SK135] Length = 329 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 15/87 (17%) Query: 6 DLFCGIGGIRL--DLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 DLF G GG+ L DLE +NV FS E + + +TY+ NFPN LI DI +I T Sbjct: 7 DLFSGAGGMSLGFDLE---GFKNV---FSVEYDLQTAQTYRYNFPNHVLINKDIQEISTN 60 Query: 63 DIPD------HDVLLAGFPCQPFSQAG 83 +I DV++ G PCQ FS AG Sbjct: 61 EIKKIINNNTVDVIIGGPPCQGFSLAG 87 >gi|194396841|ref|YP_002037999.1| Tn5253 C-5 cytosine-specific DNA methylase [Streptococcus pneumoniae G54] gi|194356508|gb|ACF54956.1| Tn5253 C-5 cytosine-specific DNA methylase [Streptococcus pneumoniae G54] Length = 452 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL +E + H EC EI+ ++ ++Y++ F G+I Sbjct: 1 MRFIDLFSGIGGFRLGME-SVGH---ECIGFCEIDKFARESYKSIFQTE---GEIEFHDI 53 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 +D+ D D++ GFPCQ FS AG Sbjct: 54 RDVSDDEFKKLRGKVDIICGGFPCQAFSIAG 84 >gi|329768652|ref|ZP_08260136.1| hypothetical protein HMPREF0428_01833 [Gemella haemolysans M341] gi|328836366|gb|EGF86031.1| hypothetical protein HMPREF0428_01833 [Gemella haemolysans M341] Length = 427 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 + DLF GIGG RL +E+ H+ C EI+ ++ +Y+ N N + + DI ++ Sbjct: 1 MNFLDLFAGIGGFRLGMERA-GHK---CVGFCEIDKFARSSYKVMHNTENEIEYHDIKEV 56 Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83 ++ DV+ GFPCQ FS AG Sbjct: 57 TNEEFRKLRAKVDVICGGFPCQAFSIAG 84 >gi|229492462|ref|ZP_04386265.1| DNA-cytosine methyltransferase [Rhodococcus erythropolis SK121] gi|229320448|gb|EEN86266.1| DNA-cytosine methyltransferase [Rhodococcus erythropolis SK121] Length = 387 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 7/78 (8%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP- 65 LF GIGG+ L L + + + C EI+P + ++ F + + GD+ K++ +P Sbjct: 10 LFAGIGGLELGLSEHGWNTELLC----EIDPGAQAVLRSRFADVPLHGDVTKLRA--LPS 63 Query: 66 DHDVLLAGFPCQPFSQAG 83 D +++ AGFPCQ SQAG Sbjct: 64 DIELVAAGFPCQDLSQAG 81 >gi|226303815|ref|YP_002763773.1| modification methylase [Rhodococcus erythropolis PR4] gi|226182930|dbj|BAH31034.1| putative modification methylase [Rhodococcus erythropolis PR4] Length = 392 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 7/78 (8%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP- 65 LF GIGG+ L L + + + C EI+P + ++ F + + GD+ K++ +P Sbjct: 15 LFAGIGGLELGLSEHGWNTELLC----EIDPGAQAVLRSRFADVPLHGDVTKLRA--LPS 68 Query: 66 DHDVLLAGFPCQPFSQAG 83 D +++ AGFPCQ SQAG Sbjct: 69 DIELVAAGFPCQDLSQAG 86 >gi|290891561|ref|ZP_06554618.1| hypothetical protein AWRIB429_2008 [Oenococcus oeni AWRIB429] gi|290478814|gb|EFD87481.1| hypothetical protein AWRIB429_2008 [Oenococcus oeni AWRIB429] Length = 382 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K DLF GIGG RL LEQ + EC EI+ ++ ++Y+A N + DI + Sbjct: 1 MKFLDLFAGIGGFRLGLEQAGH----ECVGFCEIDKFARQSYKAIHNTEGEREYHDITTV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 ++ +++ GFPCQ FS AG Sbjct: 57 SNEEWRTLRGTVELICGGFPCQAFSIAG 84 >gi|182417652|ref|ZP_02948971.1| modification methylase Sau3AI [Clostridium butyricum 5521] gi|237668746|ref|ZP_04528730.1| modification methylase Sau3AI (Cytosine-specificmethyltransferase Sau3AI) (M.Sau3AI) [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378376|gb|EDT75907.1| modification methylase Sau3AI [Clostridium butyricum 5521] gi|237657094|gb|EEP54650.1| modification methylase Sau3AI (Cytosine-specificmethyltransferase Sau3AI) (M.Sau3AI) [Clostridium butyricum E4 str. BoNT E BL5262] Length = 426 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 12/89 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNT-----LIF 53 I +LF G+GG R+ E++ + ++++ P ++ + Y+++F + Sbjct: 6 ICELFAGVGGFRVGFEKS--SPEWKTVWANQWEPSKKIQHAFECYKSHFETSGGIDEFSN 63 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI+K+ + IPDH VL+ GFPCQ +S A Sbjct: 64 TDISKVPEEHIPDHTVLVGGFPCQDYSVA 92 >gi|167758237|ref|ZP_02430364.1| hypothetical protein CLOSCI_00575 [Clostridium scindens ATCC 35704] gi|167664134|gb|EDS08264.1| hypothetical protein CLOSCI_00575 [Clostridium scindens ATCC 35704] Length = 418 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GI ++ LE+ +E + + EI+ Y++K + N P+ + GD+ K Sbjct: 21 MKVLSLFDGISCGKVALERA--GIQIEEYVAFEIDKYAIKISKKNHPDIIQRGDVTKADF 78 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS AG Sbjct: 79 SEFEGFDIVIGGSPCQGFSFAG 100 >gi|218441171|ref|YP_002379500.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] gi|218173899|gb|ACK72632.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] Length = 415 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 DLF G GG+ L EQ + + EINP TY+ NFP T+I +A I+ ++I Sbjct: 14 DLFAGAGGMSLGFEQA----GFDVLAAVEINPIHCATYEYNFPFWTIICRSVADIRGEEI 69 Query: 65 --------PDHDVLLAGFPCQPFSQAG 83 + DV+ G PCQ FS G Sbjct: 70 RQLSALKNQEIDVVFGGPPCQGFSLMG 96 >gi|296330570|ref|ZP_06873048.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674618|ref|YP_003866290.1| putative C-5 cytosine-specific DNA methylase [Bacillus subtilis subsp. spizizenii str. W23] gi|296152252|gb|EFG93123.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412862|gb|ADM37981.1| putative C-5 cytosine-specific DNA methylase [Bacillus subtilis subsp. spizizenii str. W23] Length = 298 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K +LF GIGGI L E +E E P+ K NF IF D+ + Sbjct: 1 MKSIELFAGIGGIALAAEWA----GIETVAFCEREPFCQKVLNKNFRGVPIFDDVRTLNR 56 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 Q + + D++ GFPCQP+S AG Sbjct: 57 QLLEEKGVIEPGGTIDIISGGFPCQPYSIAG 87 >gi|1709158|sp|P50192|MTHA_HAEPH RecName: Full=Modification methylase HphIA; Short=M.HphIA; AltName: Full=Cytosine-specific methyltransferase HphIA; AltName: Full=M.Hphi(C) gi|732729|emb|CAA59690.1| site-specific DNA-methyltransferase (cytosine-specific) [Haemophilus parahaemolyticus] Length = 372 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 L DLF G GG L ++ H+ S EI P+ TY+ANFP+ + D+ + Sbjct: 45 LTYIDLFSGAGGFSLGFDRAGFHQ----LLSVEIEPHYCDTYRANFPDHQVLQQDLTTLS 100 Query: 61 TQDIPDH------DVLLAGFPCQPFSQAG 83 ++ H DV++ G PCQ FS AG Sbjct: 101 DDNLLRHINHRKVDVVIGGPPCQGFSMAG 129 >gi|294651999|ref|ZP_06729281.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter haemolyticus ATCC 19194] gi|292822115|gb|EFF81036.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter haemolyticus ATCC 19194] Length = 336 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 LKI LF G GG+ L ++ FN F++E + TY+ N PNT L I +I Sbjct: 3 LKIVSLFSGAGGLDLGFQKAGFN-----ITFANEFDKDIWATYEYNHPNTHLDKRSITEI 57 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K ++P+ D ++ G PCQ +S+ G Sbjct: 58 KENEVPECDGIIGGPPCQSWSEGG 81 >gi|331085742|ref|ZP_08334825.1| hypothetical protein HMPREF0987_01128 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406665|gb|EGG86170.1| hypothetical protein HMPREF0987_01128 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 425 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKI 59 L DL GIGG RL LE H+ C E + ++ +Y+A + + D+ K+ Sbjct: 4 LTFLDLCSGIGGFRLGLESA-GHK---CVGYCEYDKFARASYEAMYDTEGEWKADDVTKL 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K D+P D+ GFPCQ S AG Sbjct: 60 KPSDVPRADIWCFGFPCQDISVAG 83 >gi|327439466|dbj|BAK15831.1| site-specific DNA methylase [Solibacillus silvestris StLB046] Length = 286 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 44/88 (50%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K DLF GIGG RL +E +H EC E + Y+ K+Y+A N DI I Sbjct: 1 MKFLDLFAGIGGFRLGMEMA-DH---ECIGYVEWDEYARKSYEAIHNTNGEWTEHDITGI 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 + + DV+ GFPCQ FS AG Sbjct: 57 TDEQWREFKGEIDVICGGFPCQAFSVAG 84 >gi|260890220|ref|ZP_05901483.1| modification methylase EcoRII [Leptotrichia hofstadii F0254] gi|260859840|gb|EEX74340.1| modification methylase EcoRII [Leptotrichia hofstadii F0254] Length = 293 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 21/45 (46%), Positives = 29/45 (64%) Query: 39 SVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + KT+ N + L DI +K+ D+PD DV++ GFPCQ FS AG Sbjct: 7 AAKTFLKNNDSKLAVDDIHNVKSTDVPDTDVIVGGFPCQAFSIAG 51 >gi|260664324|ref|ZP_05865177.1| DNA-cytosine methyltransferase [Lactobacillus jensenii SJ-7A-US] gi|260562210|gb|EEX28179.1| DNA-cytosine methyltransferase [Lactobacillus jensenii SJ-7A-US] Length = 298 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKI 59 +K DLF G+GG R LE H+ C E + ++ K+YQA + F DI Sbjct: 1 MKFLDLFSGVGGFRTGLEAA-GHK---CVGFIEFDKFARKSYQAIYDTKDEFTKNDIRTT 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K ++PD + GFPCQ S AG Sbjct: 57 KGSELPDAGIWCFGFPCQDISIAG 80 >gi|56964613|ref|YP_176344.1| site-specific DNA-methyltransferase [Bacillus clausii KSM-K16] gi|56910856|dbj|BAD65383.1| site-specific DNA-methyltransferase [Bacillus clausii KSM-K16] Length = 286 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K +LF GIGGI L E +E E P+ K ++P+ IF DI + Sbjct: 1 MKSIELFAGIGGIALAAEWA----GIETVAFCEREPFCQKILNKHWPDVPIFDDIKTLDK 56 Query: 62 Q-------DIPDHDVLLAGFPCQPFSQAG 83 + D+ +++ GFPCQP+S AG Sbjct: 57 KALEERGIDVGAIELITGGFPCQPYSVAG 85 >gi|291165856|gb|EFE27903.1| modification methylase EcoRII [Filifactor alocis ATCC 35896] Length = 375 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 17/91 (18%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--- 57 + DL GIGGIR E T + +N+ ++EI+ Y+ TYQ ++G+ A Sbjct: 2 LFTTIDLCAGIGGIRKGFELTGHFKNL---VAAEIDRYACLTYQH------LYGEDADND 52 Query: 58 ----KIKTQ-DIPDHDVLLAGFPCQPFSQAG 83 + KT + +DVLLAGFPCQ FS+AG Sbjct: 53 LTSEEFKTALEGLHYDVLLAGFPCQTFSRAG 83 >gi|269122950|ref|YP_003305527.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] gi|268314276|gb|ACZ00650.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] Length = 328 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF G GG+ L F + ++E + +TY+ N LI GDI I + Sbjct: 1 MKIISLFSGAGGLDL----GFKKAGFDIVAANEFDKTIWETYEKNHKTHLIKGDICNIHS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 P+ D ++ G PCQ +S+AG Sbjct: 57 SMFPECDGIIGGPPCQSWSEAG 78 >gi|312903177|ref|ZP_07762357.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0635] gi|310633053|gb|EFQ16336.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0635] Length = 398 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A T + DI I Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----ECIGFCEIDKFARTSYKAIHDATGEVEMHDITTI 56 Query: 60 KTQ---DIPDHDVLLAGFPCQPFSQAG 83 + I DV+ GFPCQ FS AG Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83 >gi|535137|emb|CAA56493.1| type II DNA-methyltransferase [Bacillus phage phi3T] Length = 326 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 4/80 (5%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + +LFCG GG+ F E + +I+ +VK Y+ NF + + DI +I Sbjct: 16 VLELFCG-GGLG---ATGFKSAGYEIVKALDIDKNAVKAYRHNFGDYVEQADINEIDIDS 71 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +PD DV+ G PCQ FS AG Sbjct: 72 LPDTDVIFGGPPCQDFSVAG 91 >gi|149373126|ref|ZP_01892014.1| DcmB [unidentified eubacterium SCB49] gi|149354274|gb|EDM42843.1| DcmB [unidentified eubacterium SCB49] Length = 349 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59 +KI F G GG+ L +Q FN +++E + +TY+ N PNT++ I I Sbjct: 1 MKIVSFFAGAGGLDLGFQQAGFN-----VIWANEYDKEIWETYEKNHPNTILDKRSIVNI 55 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 ++P+ D ++ G PCQ +S+AG Sbjct: 56 PADEVPECDGIIGGPPCQSWSEAG 79 >gi|239624728|ref|ZP_04667759.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium 1_7_47_FAA] gi|239521114|gb|EEQ60980.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium 1_7_47FAA] Length = 554 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLF G GG+ L +QT V+ ++E N + KTY+ NF ++ D+ I + Sbjct: 25 VIDLFAGAGGLSLGFKQT---GQVKIIAAAENNLNARKTYKRNFKLARLYSDVRTIDYAE 81 Query: 64 IPDH----DVLLAGFPCQPFSQA 82 + D D+++ G PCQ FS A Sbjct: 82 LQDTVGPVDIVIGGPPCQGFSNA 104 >gi|323475189|gb|ADX85795.1| DNA-cytosine methyltransferase [Sulfolobus islandicus REY15A] gi|323477921|gb|ADX83159.1| DNA-cytosine methyltransferase [Sulfolobus islandicus HVE10/4] Length = 325 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +K+ DLF G GG L F +E + +IN + +TY NFPNT++ DI +I Sbjct: 4 IKVIDLFSGAGGFSL----GFKKLGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQIS 59 Query: 61 TQDIPDH-----DVLLAGFPCQPFSQA 82 ++I + DV++ G PC+ ++ A Sbjct: 60 GKEILKNVGDEIDVIIGGPPCEGYTAA 86 >gi|229579730|ref|YP_002838129.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.G.57.14] gi|228010445|gb|ACP46207.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.G.57.14] Length = 325 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +K+ DLF G GG L F +E + +IN + +TY NFPNT++ DI +I Sbjct: 4 IKVIDLFSGAGGFSL----GFKKLGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQIS 59 Query: 61 TQDIPDH-----DVLLAGFPCQPFSQA 82 ++I + DV++ G PC+ ++ A Sbjct: 60 GKEILKNVGDEIDVIIGGPPCEGYTAA 86 >gi|300124212|gb|ADJ68008.1| M.BanII [Aneurinibacillus aneurinilyticus] Length = 385 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 7/80 (8%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ--D 63 LF G GG ++ F + V+ ++EI+ Y+ TYQAN P T GDI + ++ + Sbjct: 10 LFSGAGG----MDVGFKNAGVKVLCANEIDKYASATYQANNPETKFKLGDIRDVYSELKE 65 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 + D++ G PCQ FS AG Sbjct: 66 FKNIDIIFGGPPCQGFSVAG 85 >gi|229585366|ref|YP_002843868.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.27] gi|228020416|gb|ACP55823.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.27] Length = 325 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +K+ DLF G GG L F +E + +IN + +TY NFPNT++ DI +I Sbjct: 4 IKVIDLFSGAGGFSL----GFKKLGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQIS 59 Query: 61 TQDIPDH-----DVLLAGFPCQPFSQA 82 ++I + DV++ G PC+ ++ A Sbjct: 60 GKEILKNVGDEIDVIIGGPPCEGYTAA 86 >gi|227828127|ref|YP_002829907.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.14.25] gi|227830834|ref|YP_002832614.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.S.2.15] gi|229581602|ref|YP_002840001.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.N.15.51] gi|238620327|ref|YP_002915153.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.4] gi|284998349|ref|YP_003420117.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.D.8.5] gi|227457282|gb|ACP35969.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.S.2.15] gi|227459923|gb|ACP38609.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.14.25] gi|228012318|gb|ACP48079.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.N.15.51] gi|238381397|gb|ACR42485.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.4] gi|284446245|gb|ADB87747.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.D.8.5] Length = 325 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +K+ DLF G GG L F +E + +IN + +TY NFPNT++ DI +I Sbjct: 4 IKVIDLFSGAGGFSL----GFKKLGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQIS 59 Query: 61 TQDIPDH-----DVLLAGFPCQPFSQA 82 ++I + DV++ G PC+ ++ A Sbjct: 60 GKEILKNVGDEIDVIIGGPPCEGYTAA 86 >gi|168490143|ref|ZP_02714342.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae SP195] gi|183571468|gb|EDT91996.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae SP195] gi|321157174|emb|CBW39159.1| Cytosine-specific DNA methyltransferase [Streptococcus phage 11865] Length = 360 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K DLF GIGG RL +E H+ C EI+ ++ ++Y+A N + DI + Sbjct: 1 MKFLDLFAGIGGFRLGMESA-GHK---CIGFCEIDKFARESYKAIHNTKGEIELHDITAV 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I D++ GFPCQ FS AG Sbjct: 57 SDESIRGIGSVDIICGGFPCQAFSIAG 83 >gi|168494837|ref|ZP_02718980.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|168494899|ref|ZP_02719042.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|168494952|ref|ZP_02719095.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|168494999|ref|ZP_02719142.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|183575153|gb|EDT95681.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|183575203|gb|EDT95731.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|183575231|gb|EDT95759.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|183575300|gb|EDT95828.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] Length = 360 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K DLF GIGG RL +E H+ C EI+ ++ ++Y+A N + DI + Sbjct: 1 MKFLDLFAGIGGFRLGMESA-GHK---CIGFCEIDKFARESYKAIHNTKGEIELHDITAV 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I D++ GFPCQ FS AG Sbjct: 57 SDESIRGIGSVDIICGGFPCQAFSIAG 83 >gi|332668060|ref|YP_004450848.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM 1100] gi|332336874|gb|AEE53975.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM 1100] Length = 395 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 7/81 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAKIKTQ 62 + F GIG +RL LEQ E ++++I+P K YQ +F N GDI ++ + Sbjct: 15 EFFAGIGLMRLGLEQA----GWEITYANDIDPIKDKIYQNHFQDPQNHFQLGDIHQLDVK 70 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +IP + A FPC S AG Sbjct: 71 EIPYVTLATASFPCTDLSLAG 91 >gi|308182632|ref|YP_003926759.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori PeCan4] gi|308064817|gb|ADO06709.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori PeCan4] Length = 351 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHEEVQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|78000013|ref|YP_358798.1| putative methylase [Lactobacillus phage Lc-Nu] gi|37826042|gb|AAR04663.1| putative methylase [Lactobacillus phage Lc-Nu] Length = 261 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ +LF GIGGI L + +E E Y Q ++P+ +F D+ K+ Sbjct: 1 MRSLELFAGIGGIALAEQMA----GIEVAGLCEYADYPRAILQKHWPDVPLFKDVTKLDR 56 Query: 62 QDI------PDH-DVLLAGFPCQPFSQAG 83 +++ PD D++ GFPCQPFS AG Sbjct: 57 EELTNAGISPDSIDIVSGGFPCQPFSIAG 85 >gi|218895988|ref|YP_002444399.1| cytosine-specific methyltransferase NlaX [Bacillus cereus G9842] gi|218540614|gb|ACK93008.1| cytosine-specific methyltransferase NlaX [Bacillus cereus G9842] Length = 348 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 43/95 (45%), Gaps = 12/95 (12%) Query: 1 MLKITDLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIA 57 +LK DLF GIGG R L + + E EI Y F +I D+ Sbjct: 2 ILKYLDLFAGIGGFRQALINSSLKNVKFEPIGYCEIEKKCQLVYNEIFGTDGEVIVDDVK 61 Query: 58 KIKTQD---------IPDHDVLLAGFPCQPFSQAG 83 KI + D +P+ D+LL GFPCQPFS G Sbjct: 62 KIFSPDMVNVDGSKKLPEFDLLLGGFPCQPFSNVG 96 >gi|19552978|ref|NP_600980.1| site-specific DNA methylase or [Corynebacterium glutamicum ATCC 13032] Length = 356 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 7/76 (9%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK--TQD-I 64 F G GG+ L L++ + ++++ + +V+TY+ N + ++ GDI +I T D I Sbjct: 4 FSGCGGLDLGLQEV----GFDPIWANDFSEEAVQTYKHNIGDHIVHGDITEIDPFTDDTI 59 Query: 65 PDHDVLLAGFPCQPFS 80 PD D++ GFPCQ FS Sbjct: 60 PDGDLVTGGFPCQDFS 75 >gi|284051619|ref|ZP_06381829.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] Length = 443 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 44/88 (50%), Gaps = 18/88 (20%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--------PNTLIFGDI 56 DLF GIGG R+ LE + +C SEI P S++ YQ NF PN GD+ Sbjct: 18 VDLFSGIGGFRIALE----NWGGQCLGYSEIEPNSIQVYQHNFIRYANRDEPN---LGDM 70 Query: 57 AKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 + P D++ G PCQP+S AG Sbjct: 71 RSL--HKFPFTVDLITGGVPCQPWSIAG 96 >gi|291570812|dbj|BAI93084.1| cytosine-specific DNA methyltransferase [Arthrospira platensis NIES-39] Length = 443 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 44/88 (50%), Gaps = 18/88 (20%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--------PNTLIFGDI 56 DLF GIGG R+ LE + +C SEI P S++ YQ NF PN GD+ Sbjct: 18 VDLFSGIGGFRIALE----NWGGQCLGYSEIEPNSIQVYQHNFIRYANRDEPN---LGDM 70 Query: 57 AKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 + P D++ G PCQP+S AG Sbjct: 71 RSL--HKFPFTVDLITGGVPCQPWSIAG 96 >gi|229551649|ref|ZP_04440374.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus rhamnosus LMS2-1] gi|229314967|gb|EEN80940.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus rhamnosus LMS2-1] Length = 283 Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ +LF GIGGI L + +E E Y Q ++P+ +F D+ K+ Sbjct: 1 MRSLELFAGIGGIALAEQMA----GIEVAGLCEYADYPRTILQKHWPDVPLFKDVTKLDR 56 Query: 62 QDI------PDH-DVLLAGFPCQPFSQAG 83 +++ PD D++ GFPCQPFS AG Sbjct: 57 EELTNAGISPDSIDIVSGGFPCQPFSIAG 85 >gi|158284395|ref|XP_306830.2| Anopheles gambiae str. PEST AGAP012836-PA [Anopheles gambiae str. PEST] gi|157021124|gb|EAA45924.2| AGAP012836-PA [Anopheles gambiae str. PEST] Length = 238 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 5/84 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKT 61 ++ +LF GIGG+R+ LEQ + E + ++NP + + Y+ NF T+ G+I + Sbjct: 16 RVLELFSGIGGMRMALEQA--GKEFEIVSAIDVNPIANEVYKHNFGAKTVRNGNILSLTA 73 Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83 + + D +L PCQPF++ G Sbjct: 74 EKVTKLKVDTILMSPPCQPFTRNG 97 >gi|124002907|ref|ZP_01687758.1| modification methylase PspPI [Microscilla marina ATCC 23134] gi|123991557|gb|EAY30965.1| modification methylase PspPI [Microscilla marina ATCC 23134] Length = 353 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF G+GG L E+ NV F+ E NP+ + +P+T + DI + T Sbjct: 1 MRHASLFSGMGGFDLAAER-MGWVNV---FTVENNPFCQTILRHYWPDTTHYEDIRQ--T 54 Query: 62 QDIPDH---DVLLAGFPCQPFSQAG 83 P + D+L GFPCQPFSQAG Sbjct: 55 NFTPHYGQIDLLTGGFPCQPFSQAG 79 >gi|295103751|emb|CBL01295.1| DNA-methyltransferase (dcm) [Faecalibacterium prausnitzii SL3/3] Length = 412 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF---FSSEINP-----YSVKTYQANFPN--TL 51 +++ +LF G+GG RL LEQ + CF ++++ P ++ + Y+ +F + Sbjct: 4 IRVVELFAGVGGFRLGLEQASS-----CFQTVWANQWEPSMRSQFAFECYERHFGHRPEH 58 Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 + DI K +IP HD+L+ GFPCQ +S A Sbjct: 59 VCQDIVTAKG-NIPPHDLLVGGFPCQDYSIA 88 >gi|298714740|emb|CBJ25639.1| Cytosine-C5 specific DNA methyltransferase [Ectocarpus siliculosus] Length = 412 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSS-EINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 + + GIGG+R+ LE+ ++E S EI+ + Y+ NFP ++ I + QD Sbjct: 57 EFYSGIGGLRVSLEKALEAVSLETSVGSFEISSVANSVYEHNFPGCSVTRRSIEHLSAQD 116 Query: 64 IP-DHDVLLAGFPCQPFSQAG 83 I D D+ L PCQPF + G Sbjct: 117 IEVDADIWLLSPPCQPFCRVG 137 >gi|4033737|gb|AAC97190.1| modification methylase M.NspI [Nostoc sp. PCC 7524] Length = 397 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 11/85 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAK------ 58 DLFCG GGI L Q + S EI+P + T+Q NFP+ F GDI + Sbjct: 64 DLFCGAGGITQGLVQA----GFQALASVEISPIASATHQRNFPHCHHFWGDIEQFYPKSW 119 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ P+ ++++ G PCQ FS AG Sbjct: 120 LQQIGYPEVNLVVGGPPCQGFSVAG 144 >gi|313675860|ref|YP_004053856.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] gi|312942558|gb|ADR21748.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] Length = 412 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 6/82 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + +LF G GG+ + LE+ ++C +EI+ ++ +T + N P+ ++ GDI + Sbjct: 76 VLELFAGAGGLAVGLEKA----GLKCQALNEIDKWACQTLRNNRPHWNVLEGDIKDFDFK 131 Query: 63 DIPDH-DVLLAGFPCQPFSQAG 83 ++ + DV+ GFPCQ FS AG Sbjct: 132 ELENQIDVVTGGFPCQAFSYAG 153 >gi|134097718|ref|YP_001103379.1| C-5 cytosine-specific DNA methylase [Saccharopolyspora erythraea NRRL 2338] gi|291006322|ref|ZP_06564295.1| C-5 cytosine-specific DNA methylase [Saccharopolyspora erythraea NRRL 2338] gi|133910341|emb|CAM00454.1| C-5 cytosine-specific DNA methylase [Saccharopolyspora erythraea NRRL 2338] Length = 248 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 L + LF GIGG+ L LE+ + E++P+ + ++P D+ Sbjct: 4 LTVLSLFAGIGGLELGLERA----GMRVVGQVELDPWCRQVLAHHWPEVPRHDDVRTAVD 59 Query: 60 --KTQDIPDHDVLLAGFPCQPFSQAG 83 +Q PD +++ GFPCQPFS G Sbjct: 60 WWHSQPRPDVELVAGGFPCQPFSTYG 85 >gi|282851890|ref|ZP_06261250.1| modification methylase Rho11sI family protein [Lactobacillus gasseri 224-1] gi|282556899|gb|EFB62501.1| modification methylase Rho11sI family protein [Lactobacillus gasseri 224-1] Length = 343 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59 + D F GIGG R LE+ H+ C E + ++ K+YQA + F DI ++ Sbjct: 1 MNFIDFFAGIGGFRSGLEKA-GHK---CVGFVEFDKFARKSYQAMYDTKGEFTGYDIRQV 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +D+P D+ G PCQ S AG Sbjct: 57 RGKDLPKADIWTFGSPCQDVSIAG 80 >gi|256958119|ref|ZP_05562290.1| C5 methyltransferase alpha subunit [Enterococcus faecalis DS5] gi|256948615|gb|EEU65247.1| C5 methyltransferase alpha subunit [Enterococcus faecalis DS5] Length = 298 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A T + DI I Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----ECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56 Query: 60 KTQ---DIPDHDVLLAGFPCQPFSQAG 83 + I DV+ GFPCQ FS AG Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83 >gi|213692102|ref|YP_002322688.1| C-5 cytosine-specific DNA methylase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523563|gb|ACJ52310.1| C-5 cytosine-specific DNA methylase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458217|dbj|BAJ68838.1| hypothetical phage protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 880 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP--YSVKTYQANFPNTLIFGDIAKIKT 61 I LF G GG+ L ++ + ++S+I P ++++Y A+ + GDI I Sbjct: 11 IGSLFSGYGGLDLGVDMALGG-GMRVAYTSDIEPGPCAIESYHAHGDDCPNLGDITGIDF 69 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + +PD DV++ G PCQ S AG Sbjct: 70 EKLPDTDVVVGGSPCQSLSLAG 91 >gi|108562885|ref|YP_627201.1| type II DNA modification enzyme [Helicobacter pylori HPAG1] gi|107836658|gb|ABF84527.1| type II DNA modification enzyme [Helicobacter pylori HPAG1] Length = 160 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFS---THPYFELIWANDIDKDAILSYQANHKEAQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83 >gi|79835495|gb|ABB52098.1| Mod [Arthrospira platensis] Length = 412 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 44/88 (50%), Gaps = 18/88 (20%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--------PNTLIFGDI 56 DLF GIGG R+ LE + +C SEI P S++ YQ NF PN GD+ Sbjct: 18 VDLFSGIGGFRIALE----NWGGQCLGYSEIEPNSIQVYQHNFIRYANRDEPN---LGDM 70 Query: 57 AKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 + P D++ G PCQP+S AG Sbjct: 71 RSL--HKFPFTVDLITGGVPCQPWSIAG 96 >gi|54022198|ref|YP_116440.1| putative DNA cytosine methyltransferase [Nocardia farcinica IFM 10152] gi|54013706|dbj|BAD55076.1| putative DNA cytosine methyltransferase [Nocardia farcinica IFM 10152] Length = 382 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 7/82 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ LF GIGG+ L L C EI+P + A FP+T + DI ++ Sbjct: 5 RMVGLFAGIGGLELGLAA----HGWTCELLCEIDPGAQAVLGARFPDTDLHADITALRA- 59 Query: 63 DIP-DHDVLLAGFPCQPFSQAG 83 +P +++ AGFPCQ SQAG Sbjct: 60 -VPAGTELVAAGFPCQDLSQAG 80 >gi|238855331|ref|ZP_04645644.1| methyl transferase [Lactobacillus jensenii 269-3] gi|282933726|ref|ZP_06339082.1| Phi-3T prophage-derived modification methylase Phi3TI [Lactobacillus jensenii 208-1] gi|313472896|ref|ZP_07813384.1| type II DNA modification methyltransferase [Lactobacillus jensenii 1153] gi|238832031|gb|EEQ24355.1| methyl transferase [Lactobacillus jensenii 269-3] gi|239528918|gb|EEQ67919.1| type II DNA modification methyltransferase [Lactobacillus jensenii 1153] gi|281302166|gb|EFA94412.1| Phi-3T prophage-derived modification methylase Phi3TI [Lactobacillus jensenii 208-1] Length = 343 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59 + D F GIGG R LE+ H+ C E + ++ K+YQA + F DI ++ Sbjct: 1 MNFIDFFAGIGGFRSGLEKA-GHK---CVGFVEFDKFARKSYQAMYDTKGEFTGYDIRQV 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +D+P D+ G PCQ S AG Sbjct: 57 RGKDLPTADIWTFGSPCQDVSIAG 80 >gi|315650298|ref|ZP_07903370.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315487409|gb|EFU77719.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 644 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG L Q V ++SEI P+ + FP L GDI K+ Sbjct: 16 MKLGALFSGSGGFEL-AGQLVGFTPV---WASEIEPFPILVTTKRFPRMLHLGDIKKLDG 71 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +P D++ G PCQ S AG Sbjct: 72 AKMPKVDIITGGSPCQDMSIAG 93 >gi|89892790|ref|YP_516277.1| hypothetical protein DSY0044 [Desulfitobacterium hafniense Y51] gi|89332238|dbj|BAE81833.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 721 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF GIGG L + + ++SEI + ++ + FP L GDI K+ Sbjct: 1 MTMGSLFDGIGGFPLAAVRN----GIAPVWASEIEAFPIEVTKIRFPEMLHVGDITKLNG 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +P DV+ G PCQ S AG Sbjct: 57 AKLPPVDVICGGSPCQDLSVAG 78 >gi|281491829|ref|YP_003353809.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp. lactis KF147] gi|281375540|gb|ADA65046.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp. lactis KF147] Length = 351 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTF----NH---RNVECFFSSEINPYSVKTYQANFPNTLIFG 54 +I LF G GG + F NH NVE F+++I + + ++ NF Sbjct: 4 FRIASLFSGGGGTDIGFSGGFDFLGNHYKNNNVEIVFANDIEEKANEFFEENFKLKPESR 63 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFS 80 I I + ++PD D+L GFPCQ FS Sbjct: 64 SIRDIDSSELPDFDILTGGFPCQSFS 89 >gi|167746072|ref|ZP_02418199.1| hypothetical protein ANACAC_00767 [Anaerostipes caccae DSM 14662] gi|167654587|gb|EDR98716.1| hypothetical protein ANACAC_00767 [Anaerostipes caccae DSM 14662] Length = 476 Score = 48.1 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 13/88 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIAKI 59 + DLFCG GG+ L F +++I P V TY N P+T +I GDI + Sbjct: 108 MIDLFCGAGGLSLG----FTQNGFITSLANDIEPCCVDTYAHNHPDTPRENIILGDINNV 163 Query: 60 -----KTQDIPDHDVLLAGFPCQPFSQA 82 + Q DV++ G PCQ FS A Sbjct: 164 IENITELQRFSSVDVVVGGPPCQGFSMA 191 >gi|153814253|ref|ZP_01966921.1| hypothetical protein RUMTOR_00462 [Ruminococcus torques ATCC 27756] gi|145848649|gb|EDK25567.1| hypothetical protein RUMTOR_00462 [Ruminococcus torques ATCC 27756] Length = 422 Score = 48.1 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 6/80 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKIKTQD 63 DL GIGG RL LE T H+ C E + ++ +Y+A + + D+ K+K D Sbjct: 8 DLCSGIGGFRLGLE-TAGHK---CIGYCEYDKFARASYEAMYDTEGEWKAHDVTKLKPGD 63 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+ GFPCQ S AG Sbjct: 64 VPYADIWCFGFPCQDISVAG 83 >gi|1709155|sp|P50196|MTE8_ECOLX RecName: Full=Modification methylase Eco47II; Short=M.Eco47II; AltName: Full=Cytosine-specific methyltransferase Eco47II gi|558571|emb|CAA57629.1| site-specific DNA-methyltransferase (cytosine-specific) [Escherichia coli] gi|1098127|prf||2115269B methyltransferase Eco47IIM Length = 417 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 6/82 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + +LF G GG+ L LE+ ++ +EI+ ++ KT + N P ++ GD++++ Sbjct: 83 VLELFAGAGGMALGLEKA----GLKSVLLNEIDSHACKTLRKNRPEWNVVEGDVSQVDFT 138 Query: 63 DIPDH-DVLLAGFPCQPFSQAG 83 + DVL GFPCQ FS AG Sbjct: 139 PYRNTVDVLAGGFPCQAFSYAG 160 >gi|327311917|ref|YP_004338814.1| DNA-cytosine methyltransferase [Thermoproteus uzoniensis 768-20] gi|326948396|gb|AEA13502.1| DNA-cytosine methyltransferase [Thermoproteus uzoniensis 768-20] Length = 312 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 9/85 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59 M + DLF G GG + F EI+ + +TY NFP ++ D+A I Sbjct: 1 MYNVVDLFAGGGG----FSRGFADAGFRVVLGVEIDANAARTYSYNFPRAVVLEEDVASI 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFS 80 +++ H DV++ G PC+PF+ Sbjct: 57 SYREVERHVGKVDVVIGGSPCEPFT 81 >gi|228471867|ref|ZP_04056638.1| cytosine-specific methyltransferase NlaX [Capnocytophaga gingivalis ATCC 33624] gi|228276797|gb|EEK15500.1| cytosine-specific methyltransferase NlaX [Capnocytophaga gingivalis ATCC 33624] Length = 186 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%) Query: 2 LKITDLFCGIGGIRL---DLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIF 53 L+I + F G GG L++ + E SEI+ ++ + N + Sbjct: 11 LRIFEGFAGYGGASFALRKLKEKYPQFKYEVVGYSEIDKFASSLFDVNHKGKQGNPIKNW 70 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GDI I ++PD D+ GFPCQPFS AG Sbjct: 71 GDITLIDPYELPDFDMFTGGFPCQPFSSAG 100 >gi|288801979|ref|ZP_06407420.1| modification methylase HaeIII (Cytosine-specific methyltransferase HaeIII) [Prevotella melaninogenica D18] gi|288335414|gb|EFC73848.1| modification methylase HaeIII (Cytosine-specific methyltransferase HaeIII) [Prevotella melaninogenica D18] Length = 336 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +++ LF G GG L++ F++ ++E + T++ANFP+T LI GDI I Sbjct: 1 MRLISLFSGAGG----LDKGFHNAGFRTIVANEFDKKICPTFRANFPDTKLIEGDIHDIP 56 Query: 61 TQDIPDHDV-LLAGFPCQPFSQAG 83 + P + V ++ G PCQ +S+AG Sbjct: 57 SDAFPMNPVGIIGGPPCQSWSEAG 80 >gi|238751088|ref|ZP_04612584.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380] gi|238710778|gb|EEQ03000.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380] Length = 362 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 +++ LF G GG+ +E + F+++I + KT FP++ I GDI+ I Sbjct: 12 IRVLSLFSGGGGMDFGIESAGG----KVVFANDIVENACKTLDKYFPDSDIRLGDISNI- 66 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 Q P DV++ G+PCQ FS AG Sbjct: 67 -QSFPCVDVVVGGYPCQSFSMAG 88 >gi|213586034|ref|ZP_03367860.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 112 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 43/92 (46%), Gaps = 24/92 (26%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG---- 54 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F Sbjct: 25 FRFIDLFAGIGGIRRGFEAI----GGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 80 Query: 55 -------------DIAKIKTQDIPDHDVLLAG 73 + A+ Q IP HDVLLAG Sbjct: 81 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAG 112 >gi|225017397|ref|ZP_03706589.1| hypothetical protein CLOSTMETH_01323 [Clostridium methylpentosum DSM 5476] gi|224949807|gb|EEG31016.1| hypothetical protein CLOSTMETH_01323 [Clostridium methylpentosum DSM 5476] Length = 485 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 7/81 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAKIKTQ 62 D F GIGG R + F + C EI+ Y+ ++Y+A + DI K+ Sbjct: 8 DFFAGIGGFR----KGFELCGMRCVGHCEIDKYADRSYRAIHDVKEDEWYAADITKVAPA 63 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 D+P D+ GFPCQ S AG Sbjct: 64 DLPRADLWAGGFPCQDISVAG 84 >gi|307153788|ref|YP_003889172.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306984016|gb|ADN15897.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 424 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDI 64 DLF G GG+ L EQ + S EI+P T++ NFP +T+I + +I ++I Sbjct: 13 DLFAGAGGMSLGFEQA----GFDVLASVEIDPIHCATHEYNFPFSTMICRSVTEITAREI 68 Query: 65 --------PDHDVLLAGFPCQPFSQAG 83 D DV+ G PCQ FS G Sbjct: 69 RNLSPIGTQDIDVVFGGPPCQGFSLIG 95 >gi|194337838|ref|YP_002019632.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme BU-1] gi|194310315|gb|ACF45015.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme BU-1] Length = 409 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKI 59 +K ++F G GG+ LE + F H E N ++ ++ NF P + FGDI Sbjct: 1 MKTLEIFSGAGGLAKGLELSGFEHTAF-----VEFNKHACESLSENFDPARVFFGDIKDF 55 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + D D++ G PCQPFS G Sbjct: 56 DLDSLEDIDIVAGGPPCQPFSLGG 79 >gi|50365124|ref|YP_053549.1| modification methylase Sau3AI (GATC cytosine-specific methyltransferase) [Mesoplasma florum L1] gi|50363680|gb|AAT75665.1| modification methylase Sau3AI (GATC cytosine-specific methyltransferase) [Mesoplasma florum L1] Length = 404 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 8/87 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFGDI 56 +K+ +LF G+GG L L+++ N E FS++ P ++ NF ++ + Sbjct: 5 IKVVELFAGVGGFSLALKKS--KGNYEVIFSNQWEPSTKNQFAFNALNKNFKKHILSNED 62 Query: 57 AKIKTQDIP-DHDVLLAGFPCQPFSQA 82 + + +P D D+L+ GFPCQ +S A Sbjct: 63 IQFAKEKLPNDFDLLVGGFPCQDYSVA 89 >gi|255520393|ref|ZP_05387630.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes FSL J1-175] Length = 451 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 + DLF GIGG RL +E + C EI+ Y+ K+YQA + DI K+ Sbjct: 1 MNFLDLFAGIGGFRLGMEAAGH----TCVGYVEIDKYARKSYQAIHDTEGEWTAHDITKV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 + + DV+ GFPCQ FS AG Sbjct: 57 TDDEWRELRGTVDVICGGFPCQSFSIAG 84 >gi|217964683|ref|YP_002350361.1| cytosine-specific methyltransferase [Listeria monocytogenes HCC23] gi|217333953|gb|ACK39747.1| cytosine-specific methyltransferase [Listeria monocytogenes HCC23] Length = 340 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K DLF GIGG RL +E+ + EC EI+ K+YQA + DI K+ Sbjct: 1 MKFLDLFAGIGGFRLGMERAGH----ECVGYVEIDKSPRKSYQAIHDTEGEWTREDITKV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 ++ D++ GFPCQ FS AG Sbjct: 57 TDEEWRTLRGTVDIICGGFPCQSFSIAG 84 >gi|268589649|ref|ZP_06123870.1| modification methylase Eco47II [Providencia rettgeri DSM 1131] gi|291314961|gb|EFE55414.1| modification methylase Eco47II [Providencia rettgeri DSM 1131] Length = 424 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 6/82 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK-T 61 + +LF G GG+ L LE+ + +EI+ ++ T + N P+ ++ GD+A I + Sbjct: 77 VLELFAGAGGMALGLEKA----GLSAVMLNEIDKHACNTLRLNRPDWNVVEGDVAGIDFS 132 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 Q DVL GFPCQ FS AG Sbjct: 133 QYKGKVDVLAGGFPCQAFSYAG 154 >gi|295104578|emb|CBL02122.1| DNA-methyltransferase (dcm) [Faecalibacterium prausnitzii SL3/3] Length = 293 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 3/74 (4%) Query: 11 IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP-DHDV 69 IGG L + ++ + +++EINP + KTY+ NF N ++ GDI++ K IP D+ Sbjct: 6 IGGFDF-LGKHYSKTGFKIIWANEINPAACKTYRDNFGNYIVEGDISE-KINTIPASADI 63 Query: 70 LLAGFPCQPFSQAG 83 ++ GFPCQ S G Sbjct: 64 VVGGFPCQDISING 77 >gi|260909972|ref|ZP_05916659.1| modification methylase EcoRII [Prevotella sp. oral taxon 472 str. F0295] gi|260635922|gb|EEX53925.1| modification methylase EcoRII [Prevotella sp. oral taxon 472 str. F0295] Length = 370 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 18/92 (19%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFG------- 54 DLF GIGG + +C F+SE + + +Y+AN+ P+ G Sbjct: 10 DLFAGIGGFHTAMRSVGG----KCVFASEWDKNARLSYEANYIESEPHLFKKGGNGQYLY 65 Query: 55 ---DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI ++P+ D+ GFPCQPFS AG Sbjct: 66 FNEDINHAIPSEMPNFDICCGGFPCQPFSVAG 97 >gi|298286911|sp|P13906|MTB1_BACSH RecName: Full=Modification methylase BspRI; Short=M.BspRI; AltName: Full=Cytosine-specific methyltransferase BspRI gi|258593908|emb|CAA33764.2| DNA(cytosine-5)methyltransferase [Lysinibacillus sphaericus] Length = 424 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 28/108 (25%) Query: 2 LKITDLFCGIGGIRLDLE--------------QTFNHRNV----------ECFFSSEINP 37 + LFCG GG+ L E + F R+V ++++I Sbjct: 58 FNVLSLFCGAGGLDLGFELAGLEQSLGTDKALEAFKDRDVYNAIRHESVFHTVYANDIFS 117 Query: 38 YSVKTYQANFPNTLIF--GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +++TY+ N PN + DI KIK + P ++++ GFPC FS+AG Sbjct: 118 EALQTYEKNMPNHVFIHEKDIRKIK--EFPSANLVIGGFPCPGFSEAG 163 >gi|632681|gb|AAB31678.1| DNA (cytosine-5)-methyltransferase, m5C-MTase {BspRI restriction-modification system} [Escherichia coli, Peptide, 424 aa] Length = 424 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 28/108 (25%) Query: 2 LKITDLFCGIGGIRLDLE--------------QTFNHRNV----------ECFFSSEINP 37 + LFCG GG+ L E + F R+V ++++I Sbjct: 58 FNVLSLFCGAGGLDLGFELAGLEQSLGTDKALEAFKDRDVYNAIRHESVFHTVYANDIFS 117 Query: 38 YSVKTYQANFPNTLIF--GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +++TY+ N PN + DI KIK + P ++++ GFPC FS+AG Sbjct: 118 EALQTYEKNMPNHVFIHEKDIRKIK--EFPSANLVIGGFPCPGFSEAG 163 >gi|307699864|ref|ZP_07636915.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris FB024-16] gi|307614902|gb|EFN94120.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris FB024-16] Length = 439 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 24/105 (22%) Query: 2 LKITDLFCGIGGIRLDLE----------QTFNHRNVECFFSSEINP-------YSVKTYQ 44 +++ +LF G+GG RL LE + N ++++ P ++ + YQ Sbjct: 9 IRVAELFAGVGGFRLGLEGWAGDATAPGTLPSAGNFTTIWANQWEPPGTLPRQFAARCYQ 68 Query: 45 ANF-PNTLIFGDIAKIKTQ------DIPDHDVLLAGFPCQPFSQA 82 ++F N++I DIA++ +IPD D+++ GFPCQ +S A Sbjct: 69 SHFGENSVINRDIARVMDDAEAGQIEIPDVDLVVGGFPCQDYSVA 113 >gi|126433434|ref|YP_001069125.1| DNA-cytosine methyltransferase [Mycobacterium sp. JLS] gi|126233234|gb|ABN96634.1| DNA-cytosine methyltransferase [Mycobacterium sp. JLS] Length = 349 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 22 FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDIPDHDVLLAGFPCQPFS 80 F + + FS E+N ++ TY ANF IF GDI + ++P DV++ G PCQ FS Sbjct: 5 FKPQGFDPVFSVELNLHAAATYAANFGEDHIFWGDIDEALKGEVPHADVVIGGPPCQGFS 64 Query: 81 QAG 83 G Sbjct: 65 NLG 67 >gi|300933957|ref|ZP_07149213.1| DNA-cytosine methyltransferase [Corynebacterium resistens DSM 45100] Length = 363 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 7/81 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI--- 59 K+ F G GG+ L L+ + ++++ + +V TY+ N ++ GDI +I Sbjct: 6 KVVSTFAGCGGLDLGLQDV----GFDIVWANDFSKEAVATYRHNINAHIVDGDITEIDPF 61 Query: 60 KTQDIPDHDVLLAGFPCQPFS 80 + IPD D++ GFPCQ FS Sbjct: 62 TDETIPDADLVTGGFPCQDFS 82 >gi|315174236|gb|EFU18253.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX1346] Length = 192 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 + DLF GIGG RL +EQ + +C EI+ ++ ++Y+A + + DI + Sbjct: 1 MTFLDLFAGIGGFRLGMEQAGH----QCIGFCEIDEFARRSYKAIHDTSKEVEMHDITSV 56 Query: 60 K---TQDIPDHDVLLAGFPCQPFSQAG 83 + + DVL GFPCQ FS AG Sbjct: 57 SDEFVRSLGPVDVLCGGFPCQAFSIAG 83 >gi|217033040|ref|ZP_03438509.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128] gi|298736593|ref|YP_003729119.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] gi|216945239|gb|EEC23921.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128] gi|298355783|emb|CBI66655.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] Length = 351 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ + H E ++++I+ ++ +YQAN I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSK---HPYFELIWANDIDKDAILSYQANHKEAQTILCDIVQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P ++LL G PCQ +S G Sbjct: 58 HCHNLPCVSINILLGGPPCQSYSTLG 83 >gi|284050655|ref|ZP_06380865.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] gi|79835464|gb|ABB52092.1| Mod [Arthrospira platensis] Length = 406 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ LF G GG+ L F+ E ++ + N + +T++ N T+ +I +I Sbjct: 17 KLVSLFSGCGGMDL----PFHRAGFEVVWAIDCNGAACRTFRRNISETIACNNIQEIDIT 72 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +P D++ GFPCQ FS G Sbjct: 73 KVPKADLITGGFPCQDFSMIG 93 >gi|291568714|dbj|BAI90986.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39] Length = 406 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ LF G GG+ L F+ E ++ + N + +T++ N T+ +I +I Sbjct: 17 KLVSLFSGCGGMDL----PFHRAGFEVVWAIDCNGAACRTFRRNISETIACNNIQEIDIT 72 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +P D++ GFPCQ FS G Sbjct: 73 KVPKADLITGGFPCQDFSMIG 93 >gi|258593909|emb|CAA33765.2| DNA(cytosine-5)methyltransferase [Lysinibacillus sphaericus] Length = 396 Score = 47.8 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 28/108 (25%) Query: 2 LKITDLFCGIGGIRLDLE--------------QTFNHRNV----------ECFFSSEINP 37 + LFCG GG+ L E + F R+V ++++I Sbjct: 30 FNVLSLFCGAGGLDLGFELAGLEQSLGTDKALEAFKDRDVYNAIRHESVFHTVYANDIFS 89 Query: 38 YSVKTYQANFPNTLIF--GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +++TY+ N PN + DI KIK + P ++++ GFPC FS+AG Sbjct: 90 EALQTYEKNMPNHVFIHEKDIRKIK--EFPSANLVIGGFPCPGFSEAG 135 >gi|237711274|ref|ZP_04541755.1| site-specific DNA-methyltransferase [Bacteroides sp. 9_1_42FAA] gi|229455118|gb|EEO60839.1| site-specific DNA-methyltransferase [Bacteroides sp. 9_1_42FAA] Length = 296 Score = 47.8 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + +LF GIGG + L+ + E F SEI +++ ++ NFP G + I Sbjct: 3 LLELFSGIGGFSMGLQAA--GYSFEKVFFSEIEKHAIANFKYNFPYAEHIGSVTDIAKVG 60 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 I D++ G PCQ FS G Sbjct: 61 IARPDIITFGSPCQNFSAVG 80 >gi|315657354|ref|ZP_07910236.1| modification methylase NgoPII [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491826|gb|EFU81435.1| modification methylase NgoPII [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 355 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 12/89 (13%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 + + LF G GG+ L EQ FN ++E +P +T++AN P+T LI GDI + Sbjct: 1 MNVISLFSGCGGLDLGFEQAGFN-----IPVANEFDPTIYETFKANHPHTHLIEGDIRGV 55 Query: 60 KTQDIP-----DHDVLLAGFPCQPFSQAG 83 +DI + D ++ G PCQ +S+AG Sbjct: 56 TIEDIAPFVDGEVDGIIGGPPCQSWSEAG 84 >gi|282901524|ref|ZP_06309446.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii CS-505] gi|281193567|gb|EFA68542.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii CS-505] Length = 436 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 14/88 (15%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQ-- 62 DLF G GG+ L +E E S EI+P + NFPN I DI+ + ++ Sbjct: 16 DLFSGAGGLSLGIESA----GFEVVISIEIDPVHSAIHNYNFPNCANICRDISNVSSEEL 71 Query: 63 -------DIPDHDVLLAGFPCQPFSQAG 83 DI + D+L G PCQ FSQ G Sbjct: 72 WNILNDKDINEVDLLAGGPPCQGFSQMG 99 >gi|296814510|ref|XP_002847592.1| site-specific DNA-methyltransferase HphI [Arthroderma otae CBS 113480] gi|238840617|gb|EEQ30279.1| site-specific DNA-methyltransferase HphI [Arthroderma otae CBS 113480] Length = 586 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDI 64 D FCG GG+ +Q ++ ++ + +P ++ +Y+ANFP++L D+A T I Sbjct: 298 DGFCGAGGVSRGAQQA----GLKLTWAFDHSPSAMNSYRANFPSSLAETSDVADFLTNSI 353 Query: 65 PD--HDVLLAGFPCQPFSQA 82 D DVL A PCQPFS A Sbjct: 354 WDIIVDVLHASPPCQPFSPA 373 >gi|315611977|ref|ZP_07886895.1| C-5 cytosine-specific DNA methylase [Streptococcus sanguinis ATCC 49296] gi|315315966|gb|EFU64000.1| C-5 cytosine-specific DNA methylase [Streptococcus sanguinis ATCC 49296] Length = 359 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A + + DI + Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----ECIGFCEIDKFARASYKAIHDTKGEIELHDITAV 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I D++ GFPCQ FS AG Sbjct: 57 SDESIRRIGRVDIICGGFPCQAFSIAG 83 >gi|298346143|ref|YP_003718830.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC 43063] gi|298236204|gb|ADI67336.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC 43063] Length = 355 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 12/89 (13%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 + + LF G GG+ L EQ FN ++E +P +T++AN P+T LI GDI + Sbjct: 1 MNVISLFSGCGGLDLGFEQAGFN-----IPVANEFDPTIYETFKANHPHTHLIEGDIRGV 55 Query: 60 KTQDIP-----DHDVLLAGFPCQPFSQAG 83 +DI + D ++ G PCQ +S+AG Sbjct: 56 TIEDIAPFVDGEVDGIIGGPPCQSWSEAG 84 >gi|242024278|ref|XP_002432555.1| Modification methylase HaeIII, putative [Pediculus humanus corporis] gi|212518015|gb|EEB19817.1| Modification methylase HaeIII, putative [Pediculus humanus corporis] Length = 267 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 50/84 (59%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59 + + +L+ GIGG+ L+++ +++ V+ +IN + + Y+ NFP TL+ G +I + Sbjct: 1 MNVIELYSGIGGMHFALKESGIDYKVVKAV---DINTTANEVYKLNFPKTLLLGKNIQSL 57 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +D D++L PCQP ++ G Sbjct: 58 QLEDFNGIDMILMSPPCQPHTRNG 81 >gi|304390097|ref|ZP_07372051.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326579|gb|EFL93823.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 355 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 12/89 (13%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 + + LF G GG+ L EQ FN ++E +P +T++AN P+T LI GDI + Sbjct: 1 MNVISLFSGCGGLDLGFEQAGFN-----IPVANEFDPTIYETFKANHPHTHLIEGDIRGV 55 Query: 60 KTQDIP-----DHDVLLAGFPCQPFSQAG 83 +DI + D ++ G PCQ +S+AG Sbjct: 56 TIEDIAPFVDGEVDGIIGGPPCQSWSEAG 84 >gi|238923038|ref|YP_002936551.1| DcmB [Eubacterium rectale ATCC 33656] gi|238874710|gb|ACR74417.1| DcmB [Eubacterium rectale ATCC 33656] Length = 672 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 12/89 (13%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 + I LF G GG+ L E FN ++E + T++AN PNT LI GDI ++ Sbjct: 1 MNIISLFSGCGGLDLGFESAGFN-----IPVANEFDKTIWATFKANHPNTHLIEGDIRQV 55 Query: 60 KTQDIPDH-----DVLLAGFPCQPFSQAG 83 +DI + D ++ G PCQ +S+AG Sbjct: 56 TKEDIEQYIDGEIDGIIGGPPCQSWSEAG 84 >gi|127487|sp|P09795|MTS1_SALIN RecName: Full=Modification methylase SinI; Short=M.SinI; AltName: Full=Cytosine-specific methyltransferase SinI gi|79032|pir||A32008 site-specific DNA-methyltransferase (cytosine-specific) (EC 2.1.1.73) - Salmonella sp gi|154350|gb|AAA27212.1| modification methylase (M.SinI) [Salmonella enterica subsp. enterica serovar Infantis] Length = 461 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 13/90 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K F G G+ L +EQ E +SEI+ + T +N PN + GDI T+ Sbjct: 76 KALSFFSGAMGLDLGIEQA----GFETLLASEIDKAARDTILSNRPNMALIGDIRDYTTE 131 Query: 63 DI---------PDHDVLLAGFPCQPFSQAG 83 DI + D+++ G PCQ FS AG Sbjct: 132 DILKLAGVSSGNEIDLIMGGPPCQAFSTAG 161 >gi|240145320|ref|ZP_04743921.1| DNA (cytosine-5-)-methyltransferase [Roseburia intestinalis L1-82] gi|257202585|gb|EEV00870.1| DNA (cytosine-5-)-methyltransferase [Roseburia intestinalis L1-82] Length = 504 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ LF GIGG L ++ + ++SEI + + FP GDI K+ + Sbjct: 4 KLGSLFDGIGGFPLAAKRN----GIRPVWASEIEKFPMAVTMHRFPEMKHMGDITKLHGE 59 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 ++P DV+ G PCQ S AG Sbjct: 60 NLPVVDVIAGGSPCQDLSIAG 80 >gi|153868905|ref|ZP_01998633.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] gi|152074513|gb|EDN71359.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] Length = 418 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 13/86 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + DLF G GG+ LE H F++EI P TY+ N PNT L+ GD+ ++ Sbjct: 33 LVDLFAGAGGLSCGLEMAGFH----PLFANEIEPVYANTYKHNHPNTDLVIGDVRQMCAS 88 Query: 63 DIPDH--------DVLLAGFPCQPFS 80 + + D+L G PCQ FS Sbjct: 89 TLRERLGVKQGEIDLLAGGPPCQGFS 114 >gi|110834520|ref|YP_693379.1| C-5 cytosine-specific DNA methylase family protein [Alcanivorax borkumensis SK2] gi|110647631|emb|CAL17107.1| C-5 cytosine-specific DNA methylase family protein [Alcanivorax borkumensis SK2] Length = 308 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 5/77 (6%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF G GG L Q + +++I PY+ Y ANFP T + I + Q P Sbjct: 3 LFTGCGGSDSGLHQA----GYDVLMANDILPYAKDFYLANFPET-DYQVIDVREIQSFPS 57 Query: 67 HDVLLAGFPCQPFSQAG 83 DVL+ +PCQ FSQ G Sbjct: 58 ADVLVGCYPCQGFSQGG 74 >gi|323143137|ref|ZP_08077837.1| DNA (cytosine-5-)-methyltransferase [Succinatimonas hippei YIT 12066] gi|322417087|gb|EFY07721.1| DNA (cytosine-5-)-methyltransferase [Succinatimonas hippei YIT 12066] Length = 541 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLF G GG+ L QT + F E +P TY+ N PN + GD+ D Sbjct: 5 VVDLFAGAGGLSLGFVQTGKYEMKVAF---ERDPNMQATYRLNHPNVELQGDVCGADYAD 61 Query: 64 IPDH----DVLLAGFPCQPFSQA 82 I DV++ G PCQ FS A Sbjct: 62 IQKRYGAIDVVIGGPPCQGFSNA 84 >gi|312385012|gb|EFR29606.1| hypothetical protein AND_01274 [Anopheles darlingi] Length = 348 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 L++ +LF GIGG+R+ LE+T R E + ++NP + Y NF G+I + Sbjct: 13 LRVLELFSGIGGMRMALERT--GRAFEIVSAIDVNPIANSVYTHNFGEKAARNGNILSLT 70 Query: 61 TQDIPDH--DVLLAGFPCQPFSQAG 83 + I D +L PCQPF++ G Sbjct: 71 AKTISKLAIDTVLMSPPCQPFTRNG 95 >gi|291537886|emb|CBL10997.1| DNA-methyltransferase (dcm) [Roseburia intestinalis XB6B4] Length = 473 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ LF GIGG L ++ + ++SEI + + FP GDI K+ + Sbjct: 4 KLGSLFDGIGGFPLAAKRN----GIRPVWASEIEKFPMAVTMYRFPEMKHMGDITKLHGE 59 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 ++P DV+ G PCQ S AG Sbjct: 60 NLPVVDVIAGGSPCQDLSIAG 80 >gi|225375653|ref|ZP_03752874.1| hypothetical protein ROSEINA2194_01278 [Roseburia inulinivorans DSM 16841] gi|225212510|gb|EEG94864.1| hypothetical protein ROSEINA2194_01278 [Roseburia inulinivorans DSM 16841] Length = 473 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ LF GIGG L ++ + ++SEI + + FP GDI K+ + Sbjct: 4 KLGSLFDGIGGFPLAAKRN----GIRPVWASEIEKFPMAVTMYRFPEMKHMGDITKLHGE 59 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 ++P DV+ G PCQ S AG Sbjct: 60 NLPVVDVIAGGSPCQDLSIAG 80 >gi|200388503|ref|ZP_03215115.1| modification methylase HaeIII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605601|gb|EDZ04146.1| modification methylase HaeIII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 361 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 +++ LF G GG+ + + F++++ + KT FP+T I DI++I Sbjct: 12 IRVLSLFSGCGGMDFGITSAGG----DIVFANDVVENACKTLGNYFPDTDIRHSDISQI- 66 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 Q PD D+++ G+PCQ FS AG Sbjct: 67 -QSFPDVDIVVGGYPCQSFSMAG 88 >gi|206972356|ref|ZP_03233302.1| modification methylase [Bacillus cereus AH1134] gi|206732681|gb|EDZ49857.1| modification methylase [Bacillus cereus AH1134] Length = 309 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%) Query: 2 LKITDLFCG-IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +K+ LF G I G+ L + + E S+E+ +VKT + N+ +T+I DI + Sbjct: 4 IKVGSLFSGAIDGMSLGFQMC--SKQYEVIISNELEATAVKTAKLNYNHTIIQQDIRNVS 61 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + + DV+L FPCQ +S+A Sbjct: 62 VEAFRECDVILGTFPCQEYSKAA 84 >gi|300867442|ref|ZP_07112096.1| Modification methylase MthTI [Oscillatoria sp. PCC 6506] gi|300334557|emb|CBN57264.1| Modification methylase MthTI [Oscillatoria sp. PCC 6506] Length = 350 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 7/82 (8%) Query: 4 ITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKT 61 I LF G GG+ L Q FN ++SE + +TY+ N P+T + DI I + Sbjct: 9 IVALFSGCGGLDLGFSQAGFN-----VIWASEYDKDIWETYENNHPDTFLDKRDIRAISS 63 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +IPD ++ G PCQ +S+AG Sbjct: 64 AEIPDCTGIIGGSPCQSWSEAG 85 >gi|323650438|gb|ADX97294.1| M.Cac8I [Clostridium acetobutylicum] Length = 398 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 15/93 (16%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNTLIFGDI 56 ++++ F G GG+ L F E +S++ + +V+TY N + + + GDI Sbjct: 25 LMRVISFFSGAGGMDLG----FTLAGHEIVWSNDFDKDAVQTYNENIGKYWKHESVLGDI 80 Query: 57 AKIKTQD-------IPDHDVLLAGFPCQPFSQA 82 K+ ++ IPD DV++ GFPCQ FS A Sbjct: 81 TKLLSKPFEEIDKIIPDGDVVIGGFPCQGFSIA 113 >gi|315654722|ref|ZP_07907628.1| modification methylase NgoPII [Mobiluncus curtisii ATCC 51333] gi|315491186|gb|EFU80805.1| modification methylase NgoPII [Mobiluncus curtisii ATCC 51333] Length = 360 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 12/89 (13%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 + + LF G GG+ L EQ FN ++E +P +T++AN P+T LI GDI + Sbjct: 6 MNVISLFSGCGGLDLGFEQAGFN-----IPVANEFDPTIYETFKANHPHTHLIEGDIRGV 60 Query: 60 KTQDIP---DHDV--LLAGFPCQPFSQAG 83 +DI D +V ++ G PCQ +S+AG Sbjct: 61 TIEDIAPFIDGEVAGIIGGPPCQSWSEAG 89 >gi|254450593|ref|ZP_05064030.1| modification methylase FnuDI [Octadecabacter antarcticus 238] gi|198264999|gb|EDY89269.1| modification methylase FnuDI [Octadecabacter antarcticus 238] Length = 365 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K LF G GG+ ++ + F++++ Y+ +T++ F +T I GDI +I Sbjct: 1 MKTISLFSGCGGMDFGIKAA----GCDVVFANDVMKYAAETHRKYFKDTDFIHGDIREI- 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + P D+++ G+PCQ FS G Sbjct: 56 -SNFPSTDLVVGGYPCQSFSMGG 77 >gi|124009862|ref|ZP_01694529.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134] gi|123984098|gb|EAY24464.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134] Length = 353 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF G+GG L E+ NV F+ E NP+ + +P++ + DI +I Sbjct: 1 MRHASLFSGLGGFDLAAER-MGWVNV---FTVENNPFCQTILRHYWPDSTHYEDIRQIDF 56 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 D+L GFPCQPFSQAG Sbjct: 57 SPYYGQIDLLTGGFPCQPFSQAG 79 >gi|170698721|ref|ZP_02889786.1| DNA-cytosine methyltransferase [Burkholderia ambifaria IOP40-10] gi|170136346|gb|EDT04609.1| DNA-cytosine methyltransferase [Burkholderia ambifaria IOP40-10] Length = 353 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 K+ F G GG+ L F++R E + EI+ TY+ N Sbjct: 32 FKVVSFFAGCGGLDLGFTGGFSYRGERFAKLPFEIERAYEIDARCKATYEQNIGPHFETC 91 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D++ + +P+ DVL+ GFPCQ FS G Sbjct: 92 DLSTADIESMPNADVLIGGFPCQEFSICG 120 >gi|111021129|ref|YP_704101.1| DNA (cytosine-5-)-methyltransferase [Rhodococcus jostii RHA1] gi|110820659|gb|ABG95943.1| probable DNA (cytosine-5-)-methyltransferase [Rhodococcus jostii RHA1] Length = 392 Score = 47.8 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 7/78 (8%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP- 65 LF GIGG+ L L + + + C EI+P + + F + + D+ K+++ +P Sbjct: 15 LFAGIGGLELGLREHGWNTELLC----EIDPGAQAVLRTQFTDVPVHSDVTKLRS--LPR 68 Query: 66 DHDVLLAGFPCQPFSQAG 83 D +++ AGFPCQ SQAG Sbjct: 69 DIELVAAGFPCQDLSQAG 86 >gi|330723541|gb|AEC45911.1| cytosine specific DNA methyltransferase [Mycoplasma hyorhinis MCLD] Length = 416 Score = 47.8 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 21/96 (21%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF G GG+ DL E S EI P +V+TY NF N ++ I+T+ Sbjct: 93 KFIDLFSGAGGLSCDLVMA----GFEPIASVEIMPDAVETYVYNFQNRKKKEEL--IETR 146 Query: 63 DI---------------PDHDVLLAGFPCQPFSQAG 83 DI D D+++ GFPCQ FS AG Sbjct: 147 DIRDVKVKEELYNKFKDTDIDLIVGGFPCQGFSMAG 182 >gi|228911341|ref|ZP_04075144.1| Phage-related DNA methylase [Bacillus thuringiensis IBL 200] gi|228848278|gb|EEM93129.1| Phage-related DNA methylase [Bacillus thuringiensis IBL 200] Length = 236 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 L D F G+GG RL +EQ HR C E + ++ +Y+A N DI I Sbjct: 3 LTFLDFFSGVGGFRLGMEQA-KHR---CIGYVEWDKFARASYEAIHNTEGEWTNHDINNI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 K+ IP DV GFPC S A Sbjct: 59 KSGTIPKADVWCFGFPCTDISIA 81 >gi|261368869|ref|ZP_05981752.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum variabile DSM 15176] gi|282568964|gb|EFB74499.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum variabile DSM 15176] Length = 565 Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 7/84 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ DLF G GG+ L QT + +++ F E +PY +TY+ N + GD+ Sbjct: 6 KVVDLFSGAGGLSLGFLQTKKY-DIKVAF--ENSPYMQETYKKNHTGVEVQGDVCAADYA 62 Query: 63 DIPDH----DVLLAGFPCQPFSQA 82 DI DV++ G PCQ FS A Sbjct: 63 DIVRRYGKIDVVIGGPPCQGFSNA 86 >gi|269986305|gb|EEZ92611.1| DNA-cytosine methyltransferase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 349 Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF G GG+ L F + F+++ + +TY+ NF + L I IK++D Sbjct: 5 LISLFSGCGGLDLG----FRNAGFGIVFANDNDKAVWETYEKNFGHKLDGRSIIDIKSED 60 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +PD D ++ G PCQ +S AG Sbjct: 61 LPDADGIIGGPPCQSWSLAG 80 >gi|312137784|ref|YP_004005120.1| DNA (cytosine-5-)-methyltransferase [Rhodococcus equi 103S] gi|311887123|emb|CBH46432.1| DNA (cytosine-5-)-methyltransferase [Rhodococcus equi 103S] Length = 387 Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 7/78 (8%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGG+ L L + C EI+P + + + F + + GD+ ++++ +P Sbjct: 10 LFAGIGGVELGLRSHGWETELLC----EIDPGAQQVLRTRFADVELHGDVTRLRS--LPQ 63 Query: 67 H-DVLLAGFPCQPFSQAG 83 +++ AGFPCQ SQAG Sbjct: 64 RTELVAAGFPCQDLSQAG 81 >gi|218902126|ref|YP_002449960.1| cytosine-specific methyltransferase NlaX [Bacillus cereus AH820] gi|218538919|gb|ACK91317.1| cytosine-specific methyltransferase NlaX [Bacillus cereus AH820] Length = 350 Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 K+ +F GIGG L +Q E +++E++ + TY+ + L D+ ++ Sbjct: 6 KLGSMFAGIGGTCLGFQQA----GAEIVWANEVDRNASITYRHFWKGEYLQEADVTEVDK 61 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP D+L+ GFPCQ FS AG Sbjct: 62 TTIPQLDILIGGFPCQAFSIAG 83 >gi|158291464|ref|XP_312975.4| AGAP004101-PA [Anopheles gambiae str. PEST] gi|157017559|gb|EAA08679.4| AGAP004101-PA [Anopheles gambiae str. PEST] Length = 345 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 5/84 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKT 61 ++ +LF GIGG+R+ LE+ + E + ++NP + + Y+ NF T+ G+I + Sbjct: 16 RVLELFSGIGGMRMALEEA--GKEFEIVSAIDVNPIANEVYKHNFGAETVRNGNILSLTA 73 Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83 + + D +L PCQPF++ G Sbjct: 74 EKVTKLKVDTILMSPPCQPFTRNG 97 >gi|326574028|gb|EGE23977.1| DcmB [Moraxella catarrhalis CO72] Length = 337 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +KI LF G GG+ L F + ++E + T++AN NT LI GDI I Sbjct: 1 MKIISLFSGCGGLDL----GFKKAGFKIAVANEYDKSIWATFKANHHNTKLIEGDIRHIL 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 +D P D D ++ G PCQ +S+AG Sbjct: 57 EEDFPNDIDGIIGGPPCQSWSEAG 80 >gi|967022|emb|CAA62381.1| DNA (cytosine-5-)-methyltransferase [Geobacillus stearothermophilus] gi|1262297|gb|AAA96793.1| m5C-multispecific methyltransferase [Geobacillus stearothermophilus] gi|1589631|prf||2211376A cytosine-C5-DNA methyltransferase Length = 534 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + +LF G G + + L ++++ + + Y+ N + ++ GDI I Sbjct: 14 LTVAELFAGGGLMAVGLRAA----GYNLVWANDFDKSACAAYRHNLGDHIVHGDITAIDP 69 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPD DV+ G PCQ +S AG Sbjct: 70 ADIPDTDVIAGGPPCQDYSVAG 91 >gi|313667095|gb|ADR72992.1| M2.BspMI [Bacillus sp. M(2010)] Length = 353 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 11/90 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 ML DLF G GG+ L L++ + S EIN + +T++ NFP +F GDI + Sbjct: 1 MLTAVDLFSGAGGLLLALKEA----GYQTLLSCEINESACETHKYNFPEIPLFQGDIQNL 56 Query: 60 KTQDI------PDHDVLLAGFPCQPFSQAG 83 I D D+++ G PCQ +S G Sbjct: 57 TEDKIIEYTKGTDVDLVVGGPPCQGYSMFG 86 >gi|291519163|emb|CBK74384.1| DNA-methyltransferase (dcm) [Butyrivibrio fibrisolvens 16/4] Length = 406 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 10/89 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSE---INPYSVKTYQANFPNTLIFG------ 54 I +LF G+GG RL E+ N F E N ++ Y +F + Sbjct: 5 ICELFAGVGGFRLGFERLNTGWNTTWFSQWEPEKKNQWAHDCYVEHFGDLPDLQGEFHTG 64 Query: 55 -DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI+ I +IPDH++L+ GFPCQ +S A Sbjct: 65 EDISIINKDNIPDHNLLVGGFPCQDYSVA 93 >gi|310819714|ref|YP_003952072.1| cytosine-specific methyltransferase [Stigmatella aurantiaca DW4/3-1] gi|309392786|gb|ADO70245.1| Cytosine-specific methyltransferase [Stigmatella aurantiaca DW4/3-1] Length = 421 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 13/90 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 K+ LF G GG L+ F E + E++ +T + N P+ T++ DI K++ Sbjct: 5 KVISLFSGAGG----LDYGFEAAGFETAVALEMDHACCETLRENRPSWTVMETDILKVRG 60 Query: 62 QD--------IPDHDVLLAGFPCQPFSQAG 83 +D I + DVL+ G PCQPFS+AG Sbjct: 61 KDVLKAAGLKIGEADVLIGGPPCQPFSKAG 90 >gi|119513855|ref|ZP_01632813.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia spumigena CCY9414] gi|119461493|gb|EAW42572.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia spumigena CCY9414] Length = 318 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 13/88 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 KI DLF G GG L F+ E + +I+ ++ TY+ N+PNT +I DI ++ Sbjct: 4 KIIDLFAGAGG----LTTGFDMEGFESLCAIDIDAKALATYKHNYPNTKIIHQDIRQVNP 59 Query: 62 QDI--------PDHDVLLAGFPCQPFSQ 81 D+ + VL+ G PCQ FS+ Sbjct: 60 SDLRLALGLRQEELTVLIGGPPCQGFSR 87 >gi|400283|sp|P31974|MTA1_CELCE RecName: Full=Modification methylase AluI; Short=M.AluI; AltName: Full=Cytosine-specific methyltransferase AluI gi|580712|emb|CAA77866.1| Alu I DNA-(cytosine C5)-methyltransferase [Cellulosimicrobium cellulans] gi|300124216|gb|ADJ68011.1| M.AluI [Cellulosimicrobium cellulans] Length = 521 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 20/89 (22%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGG L T C ++ EI+ + Y+ N+ N GDI T D Sbjct: 12 DLFAGIGGFHAALAATGG----VCEYAVEIDREAAAVYERNW-NKPALGDI----TDDAN 62 Query: 66 DH-----------DVLLAGFPCQPFSQAG 83 D DVL GFPCQPFS++G Sbjct: 63 DEGVTLRGYDGPIDVLTGGFPCQPFSKSG 91 >gi|308063322|gb|ADO05209.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Sat464] Length = 348 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQ N I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQVNHKEVQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|302789792|ref|XP_002976664.1| hypothetical protein SELMODRAFT_105635 [Selaginella moellendorffii] gi|300155702|gb|EFJ22333.1| hypothetical protein SELMODRAFT_105635 [Selaginella moellendorffii] Length = 334 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 L++ + + GIGG+R LE+ + VE F EIN + Y+ NF + G+I ++ Sbjct: 8 LRVLEFYSGIGGLRFSLEEAKIDATVVEAF---EINELANDVYERNFGHRPNQGNIQRLS 64 Query: 61 TQDIPDH--DVLLAGFPCQPFSQAG 83 D+ + D L PCQP+++ G Sbjct: 65 VSDLDKYEADAWLLSPPCQPYTRQG 89 >gi|166363188|ref|YP_001655461.1| cytosine-specific DNA methylase [Microcystis aeruginosa NIES-843] gi|166085561|dbj|BAG00269.1| cytosine-specific DNA methylase [Microcystis aeruginosa NIES-843] Length = 387 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 36/86 (41%), Positives = 44/86 (51%), Gaps = 13/86 (15%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQD 63 DLF G GGI L Q FN S+EI+P + T+Q NFPN F GDI TQ+ Sbjct: 63 DLFSGAGGITQGLLQAGFNP-----VASAEISPIASATHQKNFPNCHHFCGDIHDFNTQE 117 Query: 64 I------PDHDVLLAGFPCQPFSQAG 83 P +++ G PCQ FS AG Sbjct: 118 WLAKIGNPFIHLVVGGPPCQGFSVAG 143 >gi|323514189|gb|ADX89637.1| putative DNA-methyltransferase, type II restriction-modification system (Enterobacteria phage RB16) [Vibrio phage ICP1_2004_A] Length = 332 Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G+ R+ LE+ V +++SEI+ ++K QAN+P+ + GD+ K + Sbjct: 1 MNVLSLFDGMACCRIALERA--GIQVGNYYASEIDKNAIKVAQANWPDNIQLGDVTKWQE 58 Query: 62 Q--DIPDHDVLLAGFPCQPFSQAG 83 D ++ GFPCQ +S AG Sbjct: 59 WGIDWASIGLVTGGFPCQAWSIAG 82 >gi|308235652|ref|ZP_07666389.1| DcmB [Gardnerella vaginalis ATCC 14018] gi|311115197|ref|YP_003986418.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis ATCC 14019] gi|310946691|gb|ADP39395.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis ATCC 14019] Length = 333 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF G GG+ L E+ E ++E + T++ N P T LI GD+ K+ Sbjct: 1 MKVLSLFSGCGGLDLGFEKA----GFEIPVANEFDKTIWDTFKINHPKTHLIEGDVRKVS 56 Query: 61 TQDIPDH-----DVLLAGFPCQPFSQAG 83 DI ++ D ++ G PCQ +S+AG Sbjct: 57 KNDISEYLSGNLDGIIGGPPCQSWSEAG 84 >gi|18976421|ref|NP_577778.1| cytosine-specific DNA-methyltransferase [Pyrococcus furiosus DSM 3638] gi|18891953|gb|AAL80173.1| site-specific DNA-methyltransferase (cytosine-specific) [Pyrococcus furiosus DSM 3638] Length = 301 Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 M + DLF G GG L F + + E KTY NFP ++ DI + Sbjct: 1 MPSVIDLFAGAGGFSLG----FKLAGFKIISAVENFKPKAKTYSFNFPEVKVYVSDIKAL 56 Query: 60 KTQDIPDHDVLLAGFPCQPFS 80 +D P DV++ G PC+PF+ Sbjct: 57 NPKDFPKADVIIGGPPCEPFT 77 >gi|14520267|ref|NP_125742.1| modification methylase [Pyrococcus abyssi GE5] gi|5457482|emb|CAB48973.1| Citosine-specific modificatrion methylase [Pyrococcus abyssi GE5] Length = 309 Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 5/80 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ DLF G GG L F E + E KTY NFP +I DI I Sbjct: 8 MKVLDLFAGAGGFSLG----FKLVGFEIVAAIENFKPKAKTYSHNFPGVKVIAQDIKVIS 63 Query: 61 TQDIPDHDVLLAGFPCQPFS 80 +I D DV++ G PC+PF+ Sbjct: 64 PDEIGDVDVIIGGPPCEPFT 83 >gi|254293303|ref|YP_003059326.1| DNA-cytosine methyltransferase [Hirschia baltica ATCC 49814] gi|254041834|gb|ACT58629.1| DNA-cytosine methyltransferase [Hirschia baltica ATCC 49814] Length = 383 Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKT 61 ++ + F G G LE +F+ C F+++ +P +TY ANF P D+ + Sbjct: 14 RVLEFFAGGGFAIKGLEDSFH-----CVFANDNDPLKSRTYTANFGPTHFDTSDVWTLDA 68 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP+ ++ A FPCQ S AG Sbjct: 69 NHIPNAELAWASFPCQDISIAG 90 >gi|319956919|ref|YP_004168182.1| DNA-cytosine methyltransferase [Nitratifractor salsuginis DSM 16511] gi|319419323|gb|ADV46433.1| DNA-cytosine methyltransferase [Nitratifractor salsuginis DSM 16511] Length = 394 Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 3/83 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF GIG + F E FS EI+ ++ K+Y A + ++ D+ + Sbjct: 1 MKIATLFSGIGAPEMAARHIFPSH--EIVFSCEIDKFARKSYAAIYGEEPLYHDVHNVPA 58 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 H D+L+ G PCQ FS AG Sbjct: 59 IFYQGHIDLLVGGSPCQSFSVAG 81 >gi|212632918|ref|YP_002309443.1| site-specific DNA-methyltransferase [Shewanella piezotolerans WP3] gi|212554402|gb|ACJ26856.1| Site-specific DNA-methyltransferase (cytosine-specific) [Shewanella piezotolerans WP3] Length = 412 Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%) Query: 27 VECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 +E F +E++ ++ KT + N P+ ++ GDI+KI I D DVL GFPCQ FS AG Sbjct: 98 LESIFLNEMDKHACKTLRHNRPDWNVVEGDISKIDFSVIKQDVDVLTGGFPCQAFSYAG 156 >gi|316931670|ref|YP_004106652.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1] gi|315599384|gb|ADU41919.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1] Length = 390 Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF G+GG+ L L + + + SEI + + F GD+A +K+ Sbjct: 1 MKIAGLFAGVGGLELGLHRAGH----DTLVFSEIWEPAGAVLERRFGGVPNVGDVASLKS 56 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 +P D D++ AGFPCQ SQAG Sbjct: 57 --LPADVDLMTAGFPCQDLSQAG 77 >gi|294155572|ref|YP_003559956.1| cytosine-specific DNA modification methyltransferase [Mycoplasma crocodyli MP145] gi|291599876|gb|ADE19372.1| cytosine-specific DNA modification methyltransferase [Mycoplasma crocodyli MP145] Length = 415 Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 17/97 (17%) Query: 2 LKITDLFCGIGGIRLDLE---------QTFNHRNVECFFSSEINPYSVKTYQANFPNTLI 52 L + +LF G+GG R+ L + + N ++++ P S K + T Sbjct: 3 LSVVELFAGVGGFRVGLNHINSFDENGRAIENNNWNFVWANQYEPSSNKQHAFECYITR- 61 Query: 53 FGD-------IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 FGD I+K+ + IPDH++L+ GFPCQ +S A Sbjct: 62 FGDKNHSNDDISKVDKKVIPDHNLLVGGFPCQDYSVA 98 >gi|257882475|ref|ZP_05662128.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,502] gi|294620467|ref|ZP_06699776.1| methyl transferase [Enterococcus faecium E1679] gi|294623872|ref|ZP_06702700.1| methyl transferase [Enterococcus faecium U0317] gi|257818133|gb|EEV45461.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,502] gi|291593380|gb|EFF24945.1| methyl transferase [Enterococcus faecium E1679] gi|291596826|gb|EFF28049.1| methyl transferase [Enterococcus faecium U0317] Length = 380 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 9/83 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKIK--- 60 DLF GIGG RL +EQ + +C EI+ ++ ++Y+A + + DI + Sbjct: 5 DLFAGIGGFRLGMEQAGH----QCIGFCEIDEFARRSYKAIHDTRKEVEMHDITSVSDEF 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + + D+L GFPCQ FS AG Sbjct: 61 VRSLGPVDILCGGFPCQAFSIAG 83 >gi|307277185|ref|ZP_07558289.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX2134] gi|306506115|gb|EFM75281.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX2134] Length = 429 Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 15/92 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY--------SVKTYQANFPNTL-I 52 L + +LF G+GG R+ LE H N + F + N + + + Y FPN+ I Sbjct: 9 LNVLELFAGVGGFRVGLE----HSNADLFKTKWANQWEPSRKSQDAFEVYDYRFPNSENI 64 Query: 53 FGDIAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 +I +I ++ D D+++ GFPCQ +S A Sbjct: 65 NRNIEEISNEEFEQMDADIIVGGFPCQDYSVA 96 >gi|308814119|ref|XP_003084365.1| possible site-specific DNA-methyltransferase (ISS) [Ostreococcus tauri] gi|116056249|emb|CAL58430.1| possible site-specific DNA-methyltransferase (ISS) [Ostreococcus tauri] Length = 625 Score = 47.0 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF GIGG + LE+ HR V E +P + + FP+ + D+A++ Sbjct: 4 LRVASLFAGIGGFDVGLERA-GHRVV---LQVEKDPRCRRVLKRRFPDVALVRDVAEVLP 59 Query: 62 QDIPDHDVLLAGFPCQPFS 80 + D+L+AGFPC S Sbjct: 60 HALDGVDLLVAGFPCNDCS 78 >gi|163755904|ref|ZP_02163021.1| modification methylase (Eco47II, Sau96I) [Kordia algicida OT-1] gi|161324075|gb|EDP95407.1| modification methylase (Eco47II, Sau96I) [Kordia algicida OT-1] Length = 413 Score = 47.0 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 6/83 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 ++ +LF G GG+ + LE+ ++C +EI+ ++ +T + N P+ ++ G+I Sbjct: 76 RVLELFAGAGGLAIGLEKA----GIKCVALNEIDKWACQTLRENRPDWNVLEGNIKSFDF 131 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 D +++ GFPCQ FS AG Sbjct: 132 SKYKDKVEIVTGGFPCQAFSYAG 154 >gi|213622824|ref|ZP_03375607.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 324 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/22 (86%), Positives = 19/22 (86%) Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 Q IP HDVLLAGFPCQPFS AG Sbjct: 15 QHIPQHDVLLAGFPCQPFSLAG 36 >gi|116750223|ref|YP_846910.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB] gi|116699287|gb|ABK18475.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB] Length = 399 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI--- 59 ++ DLF G GG+ L H + ++++ N Y+V+TY +NF + GDI + Sbjct: 21 RLIDLFSGAGGMTLGFTSRMGHF-FQPVWANDFNMYAVQTYNSNFGTHCVPGDIVDLLRD 79 Query: 60 KTQDIPDHDVLLAGFPCQPFS 80 P +V++ G PCQ FS Sbjct: 80 PAAAPPRAEVVIGGPPCQGFS 100 >gi|302782830|ref|XP_002973188.1| hypothetical protein SELMODRAFT_98974 [Selaginella moellendorffii] gi|300158941|gb|EFJ25562.1| hypothetical protein SELMODRAFT_98974 [Selaginella moellendorffii] Length = 334 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 L++ + + GIGG+R LE+ + VE F EIN + Y+ NF + G+I ++ Sbjct: 4 LRVLEFYSGIGGLRFSLEEAKIDAMVVEVF---EINELANDVYERNFGHRPNQGNIQRLS 60 Query: 61 TQDIPDH--DVLLAGFPCQPFSQAG 83 D+ + D L PCQP+++ G Sbjct: 61 VSDLDKYEADAWLLSPPCQPYTRQG 85 >gi|330939305|gb|EGH42698.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. pisi str. 1704B] Length = 382 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 7/85 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKI 59 M + F G G R L + EC +++++ Y N+ + L+ GD+A++ Sbjct: 1 MASFYEFFAGGGMARAGLGAEW-----ECLLANDLSTQKAACYAENWGDDHLLIGDVAEL 55 Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83 T+D+P H D+ A FPCQ S AG Sbjct: 56 TTKDLPGHADLAWASFPCQDLSLAG 80 >gi|229148238|ref|ZP_04276541.1| Phage-related DNA methylase [Bacillus cereus BDRD-ST24] gi|228635250|gb|EEK91777.1| Phage-related DNA methylase [Bacillus cereus BDRD-ST24] Length = 180 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 L DLF G+G +R+ LEQ + C E N + KTY+A + DI Sbjct: 3 LTFIDLFAGVGMMRIGLEQAGH----TCIGFCEWNEPARKTYEAMHDTEGEWTEHDIRNA 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K IP D+ AGFPC S+ G Sbjct: 59 KGTTIPRADIWTAGFPCTDISKNG 82 >gi|187934831|ref|YP_001884812.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum B str. Eklund 17B] gi|187722984|gb|ACD24205.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum B str. Eklund 17B] Length = 424 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 12/89 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFP-----NTLIF 53 I +LF G+GG R+ E++ + + ++++ P ++ + Y+++F N Sbjct: 5 ICELFAGVGGFRVGFEKS--SSDWKTVWANQWEPSKKVQHAFECYRSHFETSGGINEFSN 62 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI+++ + IP H VL+ GFPCQ +S A Sbjct: 63 IDISQVPEEHIPGHTVLVGGFPCQDYSVA 91 >gi|291336805|gb|ADD96340.1| DNA cytosine 5 methyltransferase [uncultured organism MedDCM-OCT-S08-C700] Length = 287 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ D F GIGG E+ F E +PY K ++PN I DI + Sbjct: 4 LRLLDTFSGIGGFSYAAEKLVGGYETTQFV--ENDPYCQKVLNKHWPNVPIHDDIETYRA 61 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + + DV+ GFPCQ S AG Sbjct: 62 E-LYSADVICGGFPCQDISAAG 82 >gi|254228592|ref|ZP_04922017.1| Site-specific DNA methylase [Vibrio sp. Ex25] gi|262392607|ref|YP_003284461.1| DNA-cytosine methyltransferase [Vibrio sp. Ex25] gi|151938974|gb|EDN57807.1| Site-specific DNA methylase [Vibrio sp. Ex25] gi|262336201|gb|ACY49996.1| DNA-cytosine methyltransferase [Vibrio sp. Ex25] Length = 427 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L F GIGG L F ++ E F E+N + + ++ + GDI+ + Sbjct: 8 LNFNSFFAGIGGFDL----AFENQGFEPSFQCELNAFCQSVLKKHWGRVPLHGDISNLDA 63 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 +IP V GFPCQ S A Sbjct: 64 SEIPKATVWCGGFPCQDLSVA 84 >gi|169834211|ref|YP_001693507.1| hypothetical protein SPH_0083 [Streptococcus pneumoniae Hungary19A-6] gi|168996713|gb|ACA37325.1| hypothetical protein SPH_0083 [Streptococcus pneumoniae Hungary19A-6] Length = 255 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K DLF GIGG R+ +E + EC EI+ ++ +Y+A + + DI + Sbjct: 1 MKFLDLFAGIGGFRIGMESAGH----ECIGFCEIDKFARASYKAIHDTKGEIELHDITTV 56 Query: 60 K---TQDIPDHDVLLAGFPCQPFSQAG 83 + I DV+ GFPCQ FS AG Sbjct: 57 SDDTIRGIGHVDVICGGFPCQAFSIAG 83 >gi|325675056|ref|ZP_08154742.1| DNA (cytosine-5-)-methyltransferase [Rhodococcus equi ATCC 33707] gi|325554017|gb|EGD23693.1| DNA (cytosine-5-)-methyltransferase [Rhodococcus equi ATCC 33707] Length = 398 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 7/78 (8%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGG+ L L + C EI+P + + + F + GD+ ++++ +P Sbjct: 21 LFAGIGGVELGLRSHGWETELLC----EIDPGAQQVLRTRFAGVELHGDVTRLRS--LPQ 74 Query: 67 H-DVLLAGFPCQPFSQAG 83 +++ AGFPCQ SQAG Sbjct: 75 RTELVAAGFPCQDLSQAG 92 >gi|325690436|gb|EGD32439.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK115] Length = 390 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIKTQD 63 D F GIGG R LE T ++C E + ++ K+Y+A + DI I Sbjct: 7 DFFAGIGGFRCGLELT----GMKCIGYCEKDKFARKSYEAMYETKGEWFHDDITSINPAQ 62 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+ AG PCQ S AG Sbjct: 63 LPKADLWCAGSPCQNLSIAG 82 >gi|197106819|ref|YP_002132196.1| DNA-cytosine methyltransferase [Phenylobacterium zucineum HLK1] gi|196480239|gb|ACG79767.1| DNA-cytosine methyltransferase [Phenylobacterium zucineum HLK1] Length = 375 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 9/82 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIAKIKTQ 62 + F G G RL L + C F+++ +P TY+ANFP+ GD+ K+ Sbjct: 10 EFFAGGGMARLGLGARW-----ACAFANDFDPVKAATYRANFPDAESHFREGDVWKLGPV 64 Query: 63 DIPDH-DVLLAGFPCQPFSQAG 83 D+P D+ A PCQ FS AG Sbjct: 65 DLPGRADLAWASSPCQDFSLAG 86 >gi|325298662|ref|YP_004258579.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] gi|324318215|gb|ADY36106.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] Length = 336 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L F++ + ++E++ TY+ NFP+ LI GDI I Sbjct: 1 MTLISLFSGAGGLDL----GFHYAGFKTIIANELDAKICPTYRINFPDVKLIEGDIRNIP 56 Query: 61 TQDIPDHDV-LLAGFPCQPFSQAG 83 + + PD ++ G PCQ +S+AG Sbjct: 57 SSEFPDGITGIIGGPPCQSWSEAG 80 >gi|255692343|ref|ZP_05416018.1| DNA (cytosine-5-)-methyltransferase [Bacteroides finegoldii DSM 17565] gi|260621969|gb|EEX44840.1| DNA (cytosine-5-)-methyltransferase [Bacteroides finegoldii DSM 17565] Length = 297 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + +LF GIGG L+ + E + SEI ++ ++ NFP G + +I T + Sbjct: 3 LLELFSGIGGFSKGLQAA--GYSFEKVYFSEIEKNAIANFKYNFPYAEHIGSVTEIGTAE 60 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 I D++ G PCQ FS G Sbjct: 61 IGHPDIITFGSPCQNFSSVG 80 >gi|317054725|ref|YP_004103193.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus] gi|294869157|gb|ADF47149.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus] Length = 363 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 11/90 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 M KI DLF G GG+ EQ + + E + + KT+ N P T +F DI I Sbjct: 1 MPKIVDLFAGAGGMTEGFEQA----GYQSALAIEYDEMAAKTFSFNHPQTPVFIKDIRTI 56 Query: 60 KTQDIPDH------DVLLAGFPCQPFSQAG 83 + + + + DVL G PCQ FS AG Sbjct: 57 QEESVREALKYSPIDVLCGGPPCQGFSLAG 86 >gi|15088756|ref|NP_150145.1| putative DNA methylase [Streptococcus phage MM1] gi|15074902|emb|CAC48079.1| putative DNA methylase [Streptococcus phage MM1] gi|73747029|gb|AAZ82425.1| C5 methyltransferase alpha subunit [Streptococcus phage MM1 1998] Length = 385 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K DLF GIGG R+ +E + EC EI+ ++ +Y+A + + DI + Sbjct: 1 MKFLDLFAGIGGFRIGMESAGH----ECIGFCEIDKFARASYKAIHDTKGEIELHDITTV 56 Query: 60 K---TQDIPDHDVLLAGFPCQPFSQAG 83 + I DV+ GFPCQ FS AG Sbjct: 57 SDDTIRGIGHVDVICGGFPCQAFSIAG 83 >gi|158339669|ref|YP_001520676.1| C-5 cytosine-specific DNA methylase [Acaryochloris marina MBIC11017] gi|158309910|gb|ABW31526.1| C-5 cytosine-specific DNA methylase [Acaryochloris marina MBIC11017] Length = 382 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 12/86 (13%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ--- 62 D+FCG GG+ L F + + NP++VKT+ NFP + D I+ Sbjct: 3 DIFCGAGGMSLG----FQKAGCKILGGIDNNPHAVKTHHQNFPKCKLKLDATDIRDIENL 58 Query: 63 -----DIPDHDVLLAGFPCQPFSQAG 83 D + D+L+ G PCQ FS+ G Sbjct: 59 EDLGIDPKEVDILIGGPPCQVFSRVG 84 >gi|261415336|ref|YP_003249019.1| DNA-cytosine methyltransferase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371792|gb|ACX74537.1| DNA-cytosine methyltransferase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326638|gb|ADL25839.1| cytosine specific DNA methyltransferase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 418 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 13/86 (15%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 F G G+ + L + ++ +SEI P + +T N PN + GDI+ +DI Sbjct: 26 FFSGAMGLDIGLSKA----GIKVLLASEIEPNARRTILTNEPNIGLIGDISDYSAEDIRK 81 Query: 67 H---------DVLLAGFPCQPFSQAG 83 + DV++ G PCQ FS AG Sbjct: 82 YANLPKNQEIDVMVGGPPCQAFSTAG 107 >gi|217977517|ref|YP_002361664.1| DNA-cytosine methyltransferase [Methylocella silvestris BL2] gi|217502893|gb|ACK50302.1| DNA-cytosine methyltransferase [Methylocella silvestris BL2] Length = 393 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 28 ECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKTQDIPD-HDVLLAGFPCQPFSQAG 83 +C F+++ + Y N+ N IFGD+AKI+ D+P D+ A FPCQ S AG Sbjct: 27 QCVFANDFSKMKAAAYIQNWGSNHFIFGDVAKIRPADMPGVADLAWASFPCQDLSLAG 84 >gi|144952808|gb|ABP04058.1| DNA methyltransferase 2 [Macrobrachium rosenbergii] Length = 396 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+I +L+ GIGG+R+ +++ + S EIN +++ YQ NFP T +I + Sbjct: 10 LRILELYSGIGGMRVAAKES--GLQFDIVGSYEINTTALEVYQHNFPKTPKAYNIMGLTL 67 Query: 62 QDIP--DHDVLLAGFPCQPFSQAG 83 + DV++ PCQPF++ G Sbjct: 68 DHLESLSPDVIMMSPPCQPFTRQG 91 >gi|282897137|ref|ZP_06305139.1| C-5 cytosine-specific DNA methylase [Raphidiopsis brookii D9] gi|281197789|gb|EFA72683.1| C-5 cytosine-specific DNA methylase [Raphidiopsis brookii D9] Length = 435 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 14/88 (15%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQD- 63 DLF G GG+ L +E E S EI+P + NFPN I DI+ + +++ Sbjct: 16 DLFSGAGGLSLGIESA----GFEVVISIEIDPVHSAIHNYNFPNCANICRDISNVSSEEL 71 Query: 64 --------IPDHDVLLAGFPCQPFSQAG 83 I + D+L G PCQ FSQ G Sbjct: 72 WNILNDKHINEVDLLAGGPPCQGFSQMG 99 >gi|224044835|ref|XP_002192893.1| PREDICTED: tRNA aspartic acid methyltransferase 1 [Taeniopygia guttata] Length = 399 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L++ +L+ GIGG+ L ++ H E + ++N + Y+ NFP+T ++ + Sbjct: 4 LRVLELYSGIGGMHQALRESCRH--AEVVAAVDVNTLANAVYKHNFPSTPLWAKTIEGIT 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 +K D D++L PCQPF++ G Sbjct: 62 LKEFDRLSFDMILLSPPCQPFTRTG 86 >gi|226363491|ref|YP_002781273.1| modification methylase [Rhodococcus opacus B4] gi|226241980|dbj|BAH52328.1| modification methylase [Rhodococcus opacus B4] Length = 381 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 7/78 (8%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGG+ L L + + + C EI+P + + F + + D+ K+++ +P Sbjct: 4 LFAGIGGLELGLREHGWNTELLC----EIDPGAQAVLRTRFTDVPVHSDVTKLRS--LPQ 57 Query: 67 H-DVLLAGFPCQPFSQAG 83 + +++ AGFPCQ SQAG Sbjct: 58 NIELVAAGFPCQDLSQAG 75 >gi|307155289|ref|YP_003890673.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306985517|gb|ADN17398.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 387 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 11/85 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAK------ 58 DLF G GGI Q F ++ S EINP + TY NFP F GDIA+ Sbjct: 74 DLFAGAGGI----TQGFVQAGLKPIASLEINPIASATYVKNFPQCHHFCGDIAEFLPINW 129 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + P+ +++ G PCQ FS AG Sbjct: 130 LNQIGSPEIHLVVGGPPCQGFSVAG 154 >gi|298385398|ref|ZP_06994956.1| C-5 cytosine-specific DNA methylase superfamily [Bacteroides sp. 1_1_14] gi|298261539|gb|EFI04405.1| C-5 cytosine-specific DNA methylase superfamily [Bacteroides sp. 1_1_14] Length = 420 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 31 FSSEINPYSVKTYQANFPNTLIFGDIAKIK-TQDIPDHDVLLAGFPCQPFSQAG 83 F EINP+ + + FPN+ + DI K +Q DVL GFPCQPFS AG Sbjct: 28 FHCEINPFCNEILKYWFPNSEHYEDITKTDFSQWKGRIDVLTGGFPCQPFSLAG 81 >gi|313665643|ref|YP_004047514.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma leachii PG50] gi|312949997|gb|ADR24593.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma leachii PG50] Length = 327 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 10/86 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 I DLF G GG+ L F N E + E +V TY NF + DI + + Sbjct: 9 IIDLFAGAGGLTLG----FTQNNFEILDTVEFWQPAVDTYNYNFKKNITVKDITNLNVRQ 64 Query: 64 -IPDH-----DVLLAGFPCQPFSQAG 83 + D+ D+++ GFPCQ FS AG Sbjct: 65 CLQDNYKSKTDLVIGGFPCQGFSMAG 90 >gi|268680341|ref|YP_003304772.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM 6946] gi|268618372|gb|ACZ12737.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM 6946] Length = 335 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + I LF G GG+ L E+ + +++E + +T++ NFP+T L I I Sbjct: 1 MNIISLFSGAGGLDLGFEKA----GFKTVWANEYDKEIWETFEKNFPHTTLDRRSIRNIP 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + DIP+ L+ G PCQ +S+AG Sbjct: 57 SCDIPEAIGLIGGPPCQSWSEAG 79 >gi|229586279|ref|YP_002844780.1| Site-specific DNA methylase [Rickettsia africae ESF-5] gi|228021329|gb|ACP53037.1| Site-specific DNA methylase [Rickettsia africae ESF-5] Length = 65 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 4/55 (7%) Query: 29 CFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 CFF I+ + Y+ NF + +GDI +I IP HD+L AGFPCQ FS +G Sbjct: 2 CFF---IDKDVQEAYKRNFGDKP-YGDITEISETKIPKHDILCAGFPCQSFSISG 52 >gi|228474527|ref|ZP_04059258.1| site-specific DNA methylase [Staphylococcus hominis SK119] gi|228271190|gb|EEK12558.1| site-specific DNA methylase [Staphylococcus hominis SK119] Length = 414 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 8/81 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62 + LF G GG+ L F ++++ +V TY+ N + +++GDI KI + Sbjct: 6 VISLFAGAGGMDLG----FKKAGFNIIWANDFEKDAVTTYKNNIGDHIVYGDITKIDIKN 61 Query: 63 DIPDH---DVLLAGFPCQPFS 80 ++P+ D+++ GFPCQ FS Sbjct: 62 ELPNEEEIDLVIGGFPCQGFS 82 >gi|148380278|ref|YP_001254819.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum A str. ATCC 3502] gi|148289762|emb|CAL83870.1| putative C-5 cytosine-specific DNA methylase [Clostridium botulinum A str. ATCC 3502] Length = 340 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K+ LF GIG L +++ E EI+ Y+ Y N +L GD++KI Sbjct: 4 IKLLSLFSGIGAFEKALSNI--NQDHEIINYCEIDKYASYAYSVLHNANESLNLGDVSKI 61 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + D D+L G PCQ FS AG Sbjct: 62 NPDTLKDFDLLTHGSPCQSFSLAG 85 >gi|15920534|ref|NP_376203.1| modification methylase [Sulfolobus tokodaii str. 7] gi|15621317|dbj|BAB65312.1| 322aa long hypothetical modification methylase [Sulfolobus tokodaii str. 7] Length = 322 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 10/85 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 + DLF G GG L F + F+ +IN + +TY NFP TL+ DI I + Sbjct: 5 VVDLFSGAGGFSLG----FKKLGFDIRFAIDINHAAARTYATNFPTTLVIEDDIRNITGR 60 Query: 63 DIP-----DHDVLLAGFPCQPFSQA 82 DI D+++ PC+P++ A Sbjct: 61 DIEYLIGRKVDIVIGSPPCEPYTGA 85 >gi|328782909|ref|XP_393991.3| PREDICTED: tRNA (cytosine-5-)-methyltransferase [Apis mellifera] Length = 360 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 5/86 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59 M+++ +L+ GIGG+ L+++ ++ + +IN + Y+ NFPN L+ +I + Sbjct: 1 MMRVLELYSGIGGMHYALQESGIKGDIVA--AVDINTVANSIYKYNFPNVLLLNCNIQSL 58 Query: 60 KTQDIPDH--DVLLAGFPCQPFSQAG 83 Q+I + D +L PCQP+++ G Sbjct: 59 SAQEINNLNIDTILMSPPCQPYTRIG 84 >gi|307210936|gb|EFN87251.1| tRNA (cytosine-5-)-methyltransferase [Harpegnathos saltator] Length = 238 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 +K+ +L+ GIGG+ L ++ V + +INP + Y+ NFP T++ +I I Sbjct: 1 MKVLELYSGIGGMHFALLESGIPAKV--VAAIDINPVANDVYRHNFPETVLMNRNIQSIS 58 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 Q + D D +L PCQPF++ G Sbjct: 59 AQTLNKLDVDAILMSPPCQPFTRLG 83 >gi|91205699|ref|YP_538054.1| cytosine-C5 specific DNA methylase-like protein [Rickettsia bellii RML369-C] gi|91069243|gb|ABE04965.1| Cytosine-C5 specific DNA methylase-like protein [Rickettsia bellii RML369-C] Length = 147 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 25/107 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFN-HRNV----------------------ECFFSSEINPY 38 +K+ LF G GG+ L E FN H + E F ++I Sbjct: 31 IKVISLFSGCGGLDLGFEGNFNIHESCIKDDDFIKSKNGNTVILKDNPFEIVFCNDIMQE 90 Query: 39 SVKTYQANFPNTLIFG--DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + ++ANF N L + I ++K +P D+++ GFPCQ FS AG Sbjct: 91 AKVAWEANFSNKLEYSTKSIRELKGYLLPKADLVIGGFPCQDFSLAG 137 >gi|284046510|ref|YP_003396850.1| DNA-cytosine methyltransferase [Conexibacter woesei DSM 14684] gi|283950731|gb|ADB53475.1| DNA-cytosine methyltransferase [Conexibacter woesei DSM 14684] Length = 424 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L DLFCG GG L Q + +++ +P + TY+ NFP T L+ GD+ + Sbjct: 7 LTAVDLFCGAGG----LSQGLADAGMHVVAAADHDPDACATYRRNFPRTVLVEGDLTSRE 62 Query: 61 TQDI-------PDHDVLLAGFPCQPFSQ 81 + D D+L G PCQ +SQ Sbjct: 63 KHEALLDALQGSDLDLLAGGPPCQAYSQ 90 >gi|154795669|gb|ABS86795.1| putative DNA methylase [Helicobacter cetorum] Length = 381 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57 LK+ DLF G+GG + F + N ++EI+ +Y+ N NT++ D Sbjct: 4 LKVLDLFAGVGG----FSKGFENANFNIVLANEIDKEIAYSYKENHKNTIMIDSDINDFL 59 Query: 58 K----IKTQDI---PDHDVLLAGFPCQPFSQAG 83 K ++T+D D DV++ G PCQ FS AG Sbjct: 60 KHYHNLETKDKEKCKDIDVIIGGSPCQGFSMAG 92 >gi|39933426|ref|NP_945702.1| site-specific DNA-methyltransferase [Rhodopseudomonas palustris CGA009] gi|192288783|ref|YP_001989388.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1] gi|39647272|emb|CAE25793.1| possible site-specific DNA-methyltransferase [Rhodopseudomonas palustris CGA009] gi|192282532|gb|ACE98912.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1] Length = 390 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G+GG+ L L + + + SEI + + F GD+A +K+ Sbjct: 1 MKVAGLFAGVGGLELGLHRAGH----DTLVFSEIWDPAGAVLERRFGGVPNVGDVASLKS 56 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 +P D D++ AGFPCQ SQAG Sbjct: 57 --LPADVDLMTAGFPCQDLSQAG 77 >gi|291561285|emb|CBL40084.1| DNA-methyltransferase (dcm) [butyrate-producing bacterium SS3/4] Length = 247 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 9/88 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQA--NFPNTLIFGDI 56 M++ LF GIG E+ ++ + E E++ Y+ K Y + P ++ GDI Sbjct: 1 MIRYLSLFSGIGA----FEKALDNLGIPYELLAYCEVDKYASKAYSLLHHVPESMNLGDI 56 Query: 57 AKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 K+ + +P D D+L GFPCQ S AG Sbjct: 57 TKVDEKALPTDIDLLTYGFPCQDISIAG 84 >gi|255073161|ref|XP_002500255.1| DNA methyltransferase [Micromonas sp. RCC299] gi|226515517|gb|ACO61513.1| DNA methyltransferase [Micromonas sp. RCC299] Length = 599 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 17/92 (18%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------------PNTL 51 ++LF G+GG + L ++ V F+SE+ ++ +TY A+ P + Sbjct: 267 SELFAGVGGFGVAL-RSLGGTPV---FASELCGHARRTYLAHHGGSWGDDGGTDARPPLV 322 Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GDI + +P HD+L GFPCQ FS+ G Sbjct: 323 CCGDITDVCETSMPPHDLLTGGFPCQSFSRRG 354 >gi|21241348|ref|NP_640930.1| cytosine methyltransferase [Xanthomonas axonopodis pv. citri str. 306] gi|21106676|gb|AAM35466.1| cytosine methyltransferase [Xanthomonas axonopodis pv. citri str. 306] Length = 106 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 + LF G GG+ ++ FS++I + KT + FP++ + GDIA + Sbjct: 17 VISLFSGCGGMDFGIKAAGGR----IVFSNDILADACKTLEKYFPDSTVSCGDIAAL--H 70 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + P+ DV++ G+PCQ FS AG Sbjct: 71 EFPEADVVVGGYPCQSFSMAG 91 >gi|308229535|gb|ADO24183.1| M.AscI [Arthrobacter sp. NEB 688] Length = 400 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 29 CFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 C +++ +P V+ Y+AN+PN + DI + DIP + A FPC SQAG Sbjct: 37 CQLANDNDPKKVRAYEANYPNVPVSALDIRDLSASDIPPATLATASFPCIDLSQAG 92 >gi|322372404|ref|ZP_08046940.1| modification methylase DdeI [Streptococcus sp. C150] gi|321277446|gb|EFX54515.1| modification methylase DdeI [Streptococcus sp. C150] Length = 387 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 14/97 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN------VECFFSSEINPYSVKTYQANFPN-TLIF 53 M+++ DLF G GG+ + T + N F++E N + + ++ N+P T+I Sbjct: 1 MIEVIDLFSGAGGLTFGFQNTIKNNNFVFRNDFNIRFANEFNRDAAEAFRLNYPKITMIE 60 Query: 54 GDIAKI-----KTQDIPDH--DVLLAGFPCQPFSQAG 83 DIA I K++ I D+++ G PCQ FS G Sbjct: 61 DDIANIDESFLKSKGISSKGVDLVIGGPPCQSFSTVG 97 >gi|315639354|ref|ZP_07894516.1| DNA (cytosine-5-)-methyltransferase [Campylobacter upsaliensis JV21] gi|315480680|gb|EFU71322.1| DNA (cytosine-5-)-methyltransferase [Campylobacter upsaliensis JV21] Length = 320 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF G GG+ L F E F+++I+ + ++Y+ N ++ DI + ++ Sbjct: 5 VISLFSGCGGLDLG----FIKAGFEVVFANDIDKEACESYEKNIGKHILCKDIYTLDVKE 60 Query: 64 IPDHDVLLAGFPCQPFSQA 82 IP+ D+L+ GFPC F+ A Sbjct: 61 IPNADLLIGGFPCLGFTIA 79 >gi|309379756|emb|CBX21532.1| putative DNA cytosine methyltransferase M.NlaII [Neisseria lactamica Y92-1009] Length = 419 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 11/90 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-----SVKTYQANFPNT----LI 52 +K+ +LF G+GG R+ LE N E ++++ P + + Y +FPN+ + Sbjct: 1 MKVLELFAGVGGFRIGLENA-NKDLFETKWANQWEPSRKSQDAFEVYDYHFPNSENINIS 59 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI K ++ D D+++ GFPCQ +S A Sbjct: 60 IADITNEKFSEM-DADMIVGGFPCQDYSVA 88 >gi|307169339|gb|EFN62060.1| tRNA (cytosine-5-)-methyltransferase [Camponotus floridanus] Length = 362 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 +K+ +L+ GIGG+ L ++ + + +INP + Y+ NFP T++ +I + Sbjct: 1 MKVLELYSGIGGMHYALRES--EITAKVVAAIDINPVANAVYRENFPETILMNRNIESLN 58 Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83 Q++ D +L PCQPF++ G Sbjct: 59 AQELNKLGLDAILMSPPCQPFTRLG 83 >gi|329769196|ref|ZP_08260616.1| hypothetical protein HMPREF0433_00380 [Gemella sanguinis M325] gi|328839415|gb|EGF88993.1| hypothetical protein HMPREF0433_00380 [Gemella sanguinis M325] Length = 415 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 16/97 (16%) Query: 2 LKITDLFCGIGGIRLDLEQT--FNHRNVECF--------FSSEINP-----YSVKTYQAN 46 L + +LF G+GG R+ L FN + + ++++ P ++ + Y Sbjct: 3 LDVVELFAGVGGFRVGLNNITEFNKKTGKALEKNGWNFVWANQYEPSTKAQHAFECYSER 62 Query: 47 FPNTLIFG-DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 F + DI K+ + IPDH +L+ GFPCQ +S A Sbjct: 63 FQDGECSNEDINKVDKKSIPDHSLLVGGFPCQDYSVA 99 >gi|153007575|ref|YP_001368790.1| DNA (cytosine-5-)-methyltransferase [Ochrobactrum anthropi ATCC 49188] gi|151559463|gb|ABS12961.1| DNA (cytosine-5-)-methyltransferase [Ochrobactrum anthropi ATCC 49188] Length = 283 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 7/86 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ DLF GIGG L LE+T V EI + + ++P + D+ ++ Sbjct: 4 LRVLDLFSGIGGFSLGLERTGGFETVA---FCEIEEFPRRVLAKHWPEVPCYHDVRELTA 60 Query: 62 QDIPDH----DVLLAGFPCQPFSQAG 83 + DV+ GFPCQ S AG Sbjct: 61 AKLASDGIAIDVICGGFPCQDISTAG 86 >gi|197301928|ref|ZP_03166992.1| hypothetical protein RUMLAC_00650 [Ruminococcus lactaris ATCC 29176] gi|197298996|gb|EDY33532.1| hypothetical protein RUMLAC_00650 [Ruminococcus lactaris ATCC 29176] Length = 134 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 13/92 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M +LF G GG+ L +E+ + +E N + T + N PN +I GD+A+I Sbjct: 1 MFTTIELFAGAGGLALGIEKA----GFKTLALNEFNADACATLRKNRPNWNVIEGDVAEI 56 Query: 60 KTQDIPDH--------DVLLAGFPCQPFSQAG 83 D+ ++ D+L G PCQ FS AG Sbjct: 57 SGLDLEEYFSVRKGELDLLSGGAPCQAFSYAG 88 >gi|157827940|ref|YP_001494182.1| site-specific DNA methylase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932629|ref|YP_001649418.1| hypothetical protein RrIowa_0090 [Rickettsia rickettsii str. Iowa] gi|157800421|gb|ABV75674.1| Site-specific DNA methylase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907716|gb|ABY72012.1| hypothetical protein RrIowa_0090 [Rickettsia rickettsii str. Iowa] Length = 65 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 4/55 (7%) Query: 29 CFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 CFF I+ + Y+ NF + +GDI +I IP HD+L AGFPCQ FS +G Sbjct: 2 CFF---IDKDVQEAYKRNFGDKP-YGDIMEISETKIPKHDILCAGFPCQSFSISG 52 >gi|313123965|ref|YP_004034224.1| modification methylase rho11Si family protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280528|gb|ADQ61247.1| Modification methylase Rho11sI family protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 349 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59 +K DLF GIGG LE+ + C E + ++ ++YQA + ++ DI + Sbjct: 1 MKFIDLFAGIGGFHTGLEKAGH----TCVGWVEWDKFARQSYQAIYDTDGLYTATDIQDV 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K D+PD D+ G PC S AG Sbjct: 57 KGVDLPDADLWTFGSPCTDISLAG 80 >gi|261400519|ref|ZP_05986644.1| modification methylase Sau3AI [Neisseria lactamica ATCC 23970] gi|269209782|gb|EEZ76237.1| modification methylase Sau3AI [Neisseria lactamica ATCC 23970] Length = 383 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 11/90 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-----SVKTYQANFPNT----LI 52 +K+ +LF G+GG R+ LE N E ++++ P + + Y +FPN+ + Sbjct: 1 MKVLELFAGVGGFRIGLENA-NKDLFETKWANQWEPSRKSQDAFEVYDYHFPNSENINIS 59 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI K ++ D D+++ GFPCQ +S A Sbjct: 60 IADITNEKFSEM-DADMIVGGFPCQDYSVA 88 >gi|193071751|ref|ZP_03052649.1| DNA-cytosine methyltransferase [Escherichia coli E110019] gi|192954951|gb|EDV85456.1| DNA-cytosine methyltransferase [Escherichia coli E110019] Length = 374 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 9/84 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFGDIA 57 ++ DLFCG GG L F H + +F S + N ++ TY ANF + +I Sbjct: 9 FRVIDLFCGAGG----LSYGFLHGEMSDYFESILAIDNNAAAINTYNANFGLHGVQANIE 64 Query: 58 KIKTQD-IPDHDVLLAGFPCQPFS 80 + + + +P+ DV++ G PCQ FS Sbjct: 65 EWASSNTVPEADVVIGGPPCQGFS 88 >gi|288927044|ref|ZP_06420936.1| site-specific DNA-methyltransferase [Prevotella buccae D17] gi|288336182|gb|EFC74571.1| site-specific DNA-methyltransferase [Prevotella buccae D17] Length = 385 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK-TQDIP 65 LF GIG L +N+ F EI + K + FPN++ + DI K T+ Sbjct: 10 LFSGIGAPEL-AAHWMGWKNL---FHCEIQEFQRKVLEYWFPNSVSYEDITKTDFTEWRG 65 Query: 66 DHDVLLAGFPCQPFSQAG 83 D+L GFPCQPFS AG Sbjct: 66 KVDILTGGFPCQPFSVAG 83 >gi|91201234|emb|CAJ74294.1| similar to site-specific DNA-methyltransferase (cytosine-specific) [Candidatus Kuenenia stuttgartiensis] Length = 313 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV-------ECFFSSEINPYSVKTYQANFPNTLIFG 54 + + LF G GG+ L F+ V E +++E++ + +TY+ N ++ G Sbjct: 8 ITVVSLFAGCGGMDLGFSGGFDFLGVHYARTQFEIIWANELSGAACRTYRKNIGQHIVEG 67 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI + ++ + DV++ GFPCQ S G Sbjct: 68 DIWQAISEMPKNADVVIGGFPCQDISVNG 96 >gi|315222617|ref|ZP_07864506.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211] gi|315188303|gb|EFU22029.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211] Length = 348 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + + LF G GG+ L E+ FN ++E + +TY+ N LI GDI I Sbjct: 9 MNLISLFSGAGGLDLGFEKAGFN-----VVAANEYDKTIWETYEKNHDTKLIKGDICGIP 63 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++ P D ++ G PCQ +S+AG Sbjct: 64 SEMFPKCDGIIGGPPCQSWSEAG 86 >gi|83944557|ref|ZP_00957008.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. EE-36] gi|83844594|gb|EAP82480.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. EE-36] Length = 373 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDI 64 + F G G +R L + C F+++++P + Y+ N+ + L+ DIA + + ++ Sbjct: 5 EFFAGGGMVRAGLGVRW-----RCLFANDVSPKKARIYRRNWGGDALVLADIAALTSAEL 59 Query: 65 PD-HDVLLAGFPCQPFSQAG 83 PD D++ FPCQ S AG Sbjct: 60 PDVPDLVWGSFPCQDLSVAG 79 >gi|329767389|ref|ZP_08258914.1| hypothetical protein HMPREF0428_00611 [Gemella haemolysans M341] gi|328836078|gb|EGF85769.1| hypothetical protein HMPREF0428_00611 [Gemella haemolysans M341] Length = 144 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 9/86 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 ++ DLF G+GG L + F E ++E++ +Y+ N P +I DI+K+ Sbjct: 4 QVIDLFSGVGG----LSKGFFDSGFEIVLANEVDYSIANSYKKNHPKVKMINEDISKLDI 59 Query: 62 QDIPDH----DVLLAGFPCQPFSQAG 83 D+ + DV++ G PCQ FSQ G Sbjct: 60 DDVFNEYKNIDVIVGGPPCQGFSQKG 85 >gi|156552675|ref|XP_001599223.1| PREDICTED: similar to DNA cytosine-5 methyltransferase 3B2 [Nasonia vitripennis] Length = 1093 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI- 59 +++ LF GIG + L+ + N+EC+++SEI+P S++ N N +I GD+ I Sbjct: 824 IRVLSLFDGIGTGLVVLKHL--NVNIECYYASEIDPDSMQVSFFNHGNEIIQLGDVRNID 881 Query: 60 --KTQDIPDHDVLLAGFPCQPFSQA 82 K ++I D+L+ G PC S A Sbjct: 882 EKKIKEIAPIDLLIGGSPCNELSLA 906 >gi|8489198|gb|AAF75616.1|AF216814_7 5-methylcytosine methyltransferase [Lactococcus lactis subsp. lactis bv. diacetylactis] gi|3702801|gb|AAC77904.1| LlaKR2I methylase enzyme [Lactococcus lactis] Length = 420 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 15/92 (16%) Query: 2 LKITDLFCGIGGIRLDLEQT----FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA 57 +K+ +LF G+GG R+ LE F + + S + + + Y +FPN+ + Sbjct: 1 MKVLELFAGVGGFRIGLENADKNLFKTKWSNQWEPSRKSQDAFEVYDYHFPNS----ENI 56 Query: 58 KIKTQDIPDH-------DVLLAGFPCQPFSQA 82 I DIPD D+++ GFPCQ +S A Sbjct: 57 NISISDIPDEKFAEMDADIIVGGFPCQDYSVA 88 >gi|284053792|ref|ZP_06384002.1| cytosine-specific DNA methylase [Arthrospira platensis str. Paraca] gi|291570060|dbj|BAI92332.1| type II DNA modification methyltransferase [Arthrospira platensis NIES-39] Length = 418 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 11/85 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQD- 63 DLF G+GGI Q F S EINP + T+Q NFPN F GD+ Sbjct: 80 DLFSGVGGI----TQGFWQAGFNPVASVEINPIASATHQRNFPNCHHFCGDVNDFNPHQW 135 Query: 64 -----IPDHDVLLAGFPCQPFSQAG 83 P +++ G PCQ FS AG Sbjct: 136 LSKIGSPSVHLVVGGPPCQGFSVAG 160 >gi|29566487|ref|NP_818053.1| gp80 [Mycobacterium phage Che9d] gi|29425212|gb|AAN07998.1| gp80 [Mycobacterium phage Che9d] Length = 252 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 + + LF GIGG+ L LE+ + EINPY + ++P+ D+ Sbjct: 1 MNVLSLFSGIGGLELGLERA----GMTVVGQVEINPYCRQILAKHWPHVPRHDDVRTTVE 56 Query: 60 --KTQDIPDHDVLLAGFPCQPFSQAG 83 ++++ P D++ GFPCQ S AG Sbjct: 57 WWESEERPRVDLICGGFPCQDISNAG 82 >gi|108797795|ref|YP_637992.1| DNA-cytosine methyltransferase [Mycobacterium sp. MCS] gi|119866887|ref|YP_936839.1| DNA-cytosine methyltransferase [Mycobacterium sp. KMS] gi|108768214|gb|ABG06936.1| DNA-cytosine methyltransferase [Mycobacterium sp. MCS] gi|119692976|gb|ABL90049.1| DNA-cytosine methyltransferase [Mycobacterium sp. KMS] Length = 385 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 7/81 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF GIGG+ + L ++ + C EI+P + + P+ + D+ +++ Sbjct: 5 VAGLFAGIGGLEVGLSRSGWETTLLC----EIDPAARAVLSHHMPDVELQDDVRRLRA-- 58 Query: 64 IPDH-DVLLAGFPCQPFSQAG 83 +P D+L AGFPCQ SQAG Sbjct: 59 LPQSLDLLAAGFPCQDLSQAG 79 >gi|251792768|ref|YP_003007494.1| DNA-cytosine methyltransferase [Aggregatibacter aphrophilus NJ8700] gi|247534161|gb|ACS97407.1| DNA-cytosine methyltransferase [Aggregatibacter aphrophilus NJ8700] Length = 383 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIA----KIKTQDIPDHDVLLAGFPCQPFSQAG 83 SEI P+ Q ++PN GD+ KI ++IP DVL+ G PCQ +S AG Sbjct: 28 SEIEPFPCALLQHHYPNVPNLGDMQNLPQKILHREIPAPDVLIGGTPCQSYSYAG 82 >gi|57506146|ref|ZP_00372067.1| cytosine specific DNA methyltransferase (DDEM) [Campylobacter upsaliensis RM3195] gi|57015541|gb|EAL52334.1| cytosine specific DNA methyltransferase (DDEM) [Campylobacter upsaliensis RM3195] Length = 316 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF G GG+ L F E F+++I+ + ++Y+ N ++ DI + ++ Sbjct: 1 MISLFSGCGGLDLG----FIKAGFEIVFANDIDKEACESYEKNIGKHILCKDIYTLDMKE 56 Query: 64 IPDHDVLLAGFPCQPFSQA 82 IP+ D+L+ GFPC F+ A Sbjct: 57 IPNADILIGGFPCLGFTIA 75 >gi|160947479|ref|ZP_02094646.1| hypothetical protein PEPMIC_01413 [Parvimonas micra ATCC 33270] gi|158446613|gb|EDP23608.1| hypothetical protein PEPMIC_01413 [Parvimonas micra ATCC 33270] Length = 348 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + + LF G GG+ L E+ FN ++E + +TY+ N LI GDI I Sbjct: 9 MNLVSLFSGAGGLDLGFERAGFN-----IVVANEYDKTIWETYEKNHKTKLIKGDICGIP 63 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + P D ++ G PCQ +S+AG Sbjct: 64 SDMFPKCDGIIGGPPCQSWSEAG 86 >gi|254526757|ref|ZP_05138809.1| modification methylase EcoRII [Prochlorococcus marinus str. MIT 9202] gi|221538181|gb|EEE40634.1| modification methylase EcoRII [Prochlorococcus marinus str. MIT 9202] Length = 298 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/25 (76%), Positives = 21/25 (84%) Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + T+ IP HDVLLAGFPCQPFS AG Sbjct: 1 MDTKSIPSHDVLLAGFPCQPFSLAG 25 >gi|240127759|ref|ZP_04740420.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae SK-93-1035] Length = 347 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 2/61 (3%) Query: 22 FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD--IPDHDVLLAGFPCQPF 79 F+ E ++++ + ++ ++++ N + ++ GDI +I D IPD D++L GFPCQ F Sbjct: 5 FHQAGCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPNDPTIPDCDIILGGFPCQDF 64 Query: 80 S 80 S Sbjct: 65 S 65 >gi|240114016|ref|ZP_04728506.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae MS11] Length = 333 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 L DLF G GG+ L EQ + S E+ +TY+ NFP + L+ D+ + Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPRHQLLQKDLTTLT 60 Query: 61 TQDIPD------HDVLLAGFPCQPFSQAG 83 QD+ + D+++ G PCQ FS AG Sbjct: 61 EQDLTNCLNGQSVDLVIGGPPCQGFSMAG 89 >gi|322796386|gb|EFZ18927.1| hypothetical protein SINV_80475 [Solenopsis invicta] Length = 354 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 5/86 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 ++++ +L+ GIGG+ L ++ V + +INP + Y NFP T LI +I I Sbjct: 8 IMRVMELYSGIGGMHYALCESGIAAKV--VTAIDINPIANDVYHHNFPETVLINRNIQSI 65 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 Q++ + D++L PCQPF++ G Sbjct: 66 NAQELNKLNIDIILMSPPCQPFTRLG 91 >gi|194098099|ref|YP_002001147.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae NCCP11945] gi|239998556|ref|ZP_04718480.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae 35/02] gi|240013681|ref|ZP_04720594.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae DGI18] gi|240016120|ref|ZP_04722660.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA6140] gi|240080261|ref|ZP_04724804.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA19] gi|240112474|ref|ZP_04726964.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae MS11] gi|240115214|ref|ZP_04729276.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae PID18] gi|240120750|ref|ZP_04733712.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae PID24-1] gi|240123054|ref|ZP_04736010.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae PID332] gi|240125307|ref|ZP_04738193.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae SK-92-679] gi|193933389|gb|ACF29213.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae NCCP11945] gi|317163831|gb|ADV07372.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae TCDC-NG08107] Length = 347 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 2/61 (3%) Query: 22 FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD--IPDHDVLLAGFPCQPF 79 F+ E ++++ + ++ ++++ N + ++ GDI +I D IPD D++L GFPCQ F Sbjct: 5 FHQAGCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPNDPTIPDCDIILGGFPCQDF 64 Query: 80 S 80 S Sbjct: 65 S 65 >gi|157953266|ref|YP_001498157.1| hypothetical protein AR158_C075L [Paramecium bursaria Chlorella virus AR158] gi|156067914|gb|ABU43621.1| hypothetical protein AR158_C075L [Paramecium bursaria Chlorella virus AR158] Length = 343 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML+ DLF GIGG L ++ E + FP+ IF D+ Sbjct: 4 MLRSLDLFSGIGGNSYALRDI-----LKPIAYVEREQHLRDFLGRKFPDVPIFDDVVTFD 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 T+ + D D++ AGFPC FS AG Sbjct: 59 TRSVKDIDIITAGFPCTGFSTAG 81 >gi|53804329|ref|YP_114062.1| C-5 cytosine-specific DNA methylase family protein [Methylococcus capsulatus str. Bath] gi|53758090|gb|AAU92381.1| C-5 cytosine-specific DNA methylase family protein [Methylococcus capsulatus str. Bath] Length = 345 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 + LF G GG+ L F +++EIN + +TY+ N + + G Sbjct: 42 FSVISLFSGCGGMDLGFRGGFEFLGKRYAKLPFNVIWANEINEAACQTYRRNLGSHIHHG 101 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI ++ P+ DV++ GFPCQ S G Sbjct: 102 DIWQMMDSLPPEADVVIGGFPCQDISVNG 130 >gi|59802210|ref|YP_208922.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA 1090] gi|239997871|ref|ZP_04717795.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02] gi|240015148|ref|ZP_04722061.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI18] gi|240017596|ref|ZP_04724136.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA6140] gi|240081740|ref|ZP_04726283.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19] gi|240116752|ref|ZP_04730814.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae PID18] gi|240118973|ref|ZP_04733035.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae PID1] gi|240122219|ref|ZP_04735181.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae PID24-1] gi|240124509|ref|ZP_04737465.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae PID332] gi|240124618|ref|ZP_04737504.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae SK-92-679] gi|240129189|ref|ZP_04741850.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|260439487|ref|ZP_05793303.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2] gi|268593717|ref|ZP_06127884.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02] gi|268597838|ref|ZP_06132005.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19] gi|268683185|ref|ZP_06150047.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae SK-92-679] gi|291042721|ref|ZP_06568462.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2] gi|293398253|ref|ZP_06642458.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|2330911|gb|AAC45838.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae] gi|59719105|gb|AAW90510.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA 1090] gi|268547106|gb|EEZ42524.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02] gi|268551626|gb|EEZ46645.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19] gi|268623469|gb|EEZ55869.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae SK-92-679] gi|291013155|gb|EFE05121.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2] gi|291611516|gb|EFF40586.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|317165321|gb|ADV08862.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae TCDC-NG08107] Length = 333 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 L DLF G GG+ L EQ + S E+ +TY+ NFP + L+ D+ + Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPRHQLLQKDLTTLT 60 Query: 61 TQDIPD------HDVLLAGFPCQPFSQAG 83 QD+ + D+++ G PCQ FS AG Sbjct: 61 EQDLTNCLNGQSVDLVIGGPPCQGFSMAG 89 >gi|308172812|ref|YP_003919517.1| DNA (cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens DSM 7] gi|307605676|emb|CBI42047.1| DNA (cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens DSM 7] Length = 406 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 8/84 (9%) Query: 2 LKITDLFCG--IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 + + +LFCG +G I F + + + +VK Y+ NF + + DI+ + Sbjct: 105 MNVLELFCGGGLGAI------GFKAAGYNIVKALDFDKNAVKAYRHNFGDYVEQADISAV 158 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +PD DV+ G PCQ FS AG Sbjct: 159 DIDSLPDTDVIFGGPPCQDFSVAG 182 >gi|256375192|ref|YP_003098852.1| DNA-cytosine methyltransferase [Actinosynnema mirum DSM 43827] gi|255919495|gb|ACU35006.1| DNA-cytosine methyltransferase [Actinosynnema mirum DSM 43827] Length = 361 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQ 62 + DLF G GG + F E + E + ++ TY ANF + + DIA + Sbjct: 1 MIDLFAGCGG----MTSGFTSAGFEPVMAVEHDLHAASTYAANFGEDHVRWADIAAVPDS 56 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +P DV++ G PCQ FS G Sbjct: 57 AVPRVDVVVGGPPCQGFSTLG 77 >gi|157826842|ref|YP_001495906.1| cytosine-C5 specific DNA methylase [Rickettsia bellii OSU 85-389] gi|157802146|gb|ABV78869.1| Cytosine-C5 specific DNA methylase [Rickettsia bellii OSU 85-389] Length = 374 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 25/107 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFN-HRN----------------------VECFFSSEINPY 38 +K+ LF G GG+ L E FN H + E F ++I Sbjct: 31 IKVISLFSGCGGLDLGFEGNFNIHESCIKDDDFIKSKNGNTVILKDNPFEIVFCNDIMQE 90 Query: 39 SVKTYQANFPNTLIFG--DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + ++ANF N L + I ++K +P D+++ GFPCQ FS AG Sbjct: 91 AKVAWEANFSNKLEYSTKSIRELKGYLLPKADLVIGGFPCQDFSLAG 137 >gi|157952392|ref|YP_001497284.1| hypothetical protein NY2A_B088L [Paramecium bursaria Chlorella virus NY2A] gi|155122619|gb|ABT14487.1| hypothetical protein NY2A_B088L [Paramecium bursaria Chlorella virus NY2A] Length = 343 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML+ DLF GIGG L ++ E + FP+ IF D+ Sbjct: 4 MLRSLDLFSGIGGNSYALRDI-----LKPVAYVEREQHLRDFLGRKFPDVPIFDDVVTFD 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 T+ + D D++ AGFPC FS AG Sbjct: 59 TRSVKDIDIITAGFPCTGFSTAG 81 >gi|112818953|gb|ABI23560.1| DNA methyltransferase 2 [Artemia franciscana] Length = 379 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 4/85 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 +++ +LF G+GG+ + + N++ S EIN +VKTYQ NF + ++ +I + Sbjct: 4 IQVLELFAGLGGLHIAVNNQ-KDANIQVVKSFEINVNAVKTYQENFGHDVVSNRNILSLS 62 Query: 61 TQDIPDHDV--LLAGFPCQPFSQAG 83 T+++ +V + PCQPF++ G Sbjct: 63 TEELFRQNVNAIFMSPPCQPFTRLG 87 >gi|145630454|ref|ZP_01786235.1| modification methylase Bsp6I-like protein [Haemophilus influenzae R3021] gi|144984189|gb|EDJ91626.1| modification methylase Bsp6I-like protein [Haemophilus influenzae R3021] Length = 362 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIA----KIKTQDIPDHDVLLAGFPCQPFSQAG 83 SEI P+ ++PN GD+ KI ++IP DVL+ G PCQ FS AG Sbjct: 150 SEIEPFPCAVLAYHYPNIPNLGDMTTLPEKILNREIPAPDVLVGGTPCQAFSVAG 204 >gi|124005671|ref|ZP_01690510.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134] gi|123988739|gb|EAY28345.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134] Length = 352 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF G+GG L Q NV F+ E NP+ + +P+T+ + DI + T Sbjct: 1 MRHASLFSGLGGFDL-AAQRMGWVNV---FTVENNPFCQAILRHYWPDTIHYEDIRQ--T 54 Query: 62 QDIPDH---DVLLAGFPCQPFSQAG 83 P + D++ GFPCQPFS AG Sbjct: 55 NFHPYYGKVDIITGGFPCQPFSNAG 79 >gi|300863842|ref|ZP_07108767.1| Cytosine-specific methyltransferase (fragment) [Oscillatoria sp. PCC 6506] gi|300338190|emb|CBN53913.1| Cytosine-specific methyltransferase (fragment) [Oscillatoria sp. PCC 6506] Length = 237 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 11/86 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ- 62 DLFCG GG+ L Q + S E NP + T+Q NFP F GDI Q Sbjct: 63 VDLFCGAGGMTQGLVQA----GFQPVASVEANPIASATHQKNFPKCHHFCGDIKSFSPQQ 118 Query: 63 -----DIPDHDVLLAGFPCQPFSQAG 83 + P +++ G PCQ FS AG Sbjct: 119 WLSQINSPKVHLVVGGPPCQGFSVAG 144 >gi|170680813|ref|YP_001746263.1| DNA-cytosine methyltransferase family protein [Escherichia coli SMS-3-5] gi|307315390|ref|ZP_07594959.1| DNA-cytosine methyltransferase [Escherichia coli W] gi|33413740|gb|AAN28260.1| Mth [Enterobacteria phage WPhi] gi|170518531|gb|ACB16709.1| DNA-cytosine methyltransferase family protein [Escherichia coli SMS-3-5] gi|306905264|gb|EFN35809.1| DNA-cytosine methyltransferase [Escherichia coli W] gi|315063217|gb|ADT77544.1| DNA cytosine methylase [Escherichia coli W] gi|323380718|gb|ADX52986.1| DNA-cytosine methyltransferase [Escherichia coli KO11] Length = 312 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 9/85 (10%) Query: 1 MLKITDLFCGIGGIRLD-LEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAK 58 M + LF G GG L FN +++I PY+ Y N P T I GDI+ Sbjct: 1 MPTVVSLFSGCGGSDAGVLNAGFN-----VLMANDILPYARDVYLENHPETDYILGDISG 55 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + Q P ++L+ +PCQ FSQ G Sbjct: 56 L--QSFPSAELLIGCYPCQGFSQGG 78 >gi|328946815|gb|EGG40952.1| modification methylase DdeI [Streptococcus sanguinis SK1087] Length = 387 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 14/97 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQT-----FNHRN-VECFFSSEINPYSVKTYQANFPN-TLIF 53 M+++ DLF G GG+ + T F RN F++E N + + ++ N+P T+I Sbjct: 1 MIEVVDLFSGAGGLTFGFQNTIKNNKFVSRNDFNIRFANEFNHDAAEAFRQNYPRVTMIE 60 Query: 54 GDIAKI-----KTQDIPDH--DVLLAGFPCQPFSQAG 83 DIA I K++ I D+++ G PCQ FS G Sbjct: 61 EDIANIDKHFLKSKGISSKRVDLVIGGPPCQSFSTVG 97 >gi|1098476|gb|AAC37047.1| orf; homologous to Haemophilus parahaemolyticus hphIM(C) Accession Number M24625 [Neisseria meningitidis] Length = 276 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 L DLF G GG+ L EQ + S E+ +TY+ NFP + L+ D+ + Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLT 60 Query: 61 TQDIPD------HDVLLAGFPCQPFSQAG 83 QD+ + D+++ G PCQ FS AG Sbjct: 61 EQDLINCLNGQAVDLIIGGPPCQGFSMAG 89 >gi|325127899|gb|EGC50802.1| DNA-cytosine methyltransferase [Neisseria meningitidis N1568] Length = 411 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFP--NTLIFGDIA 57 +++ +F GIG + EQ F+ N+ FS +I+PY K+Y N+ DI Sbjct: 38 IRLATVFSGIGAV----EQAFHRLNLNHTIVFSGDIDPYVKKSYLGNYKLNEDFWHNDIT 93 Query: 58 KIKTQDIPDH-DVLLAGFPCQPFSQAG 83 + + + D+L+ G PCQ FS G Sbjct: 94 QFDARKFRNQVDILVGGSPCQAFSMVG 120 >gi|323356693|ref|YP_004223089.1| site-specific DNA methylase [Microbacterium testaceum StLB037] gi|323273064|dbj|BAJ73209.1| site-specific DNA methylase [Microbacterium testaceum StLB037] Length = 360 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 10/81 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI- 64 DLFCG GG+ L L+Q ++ +++P Y+ N I D+ +K D+ Sbjct: 12 DLFCGAGGLSLGLKQA----GIDVVAGIDLDPACQYPYEQNLKAQFILKDVGDVKGVDLQ 67 Query: 65 ---PDHDV-LLAG-FPCQPFS 80 P+ + LLAG PCQPFS Sbjct: 68 ALWPEGKLRLLAGCAPCQPFS 88 >gi|295100151|emb|CBK89240.1| DNA-methyltransferase (dcm) [Eubacterium cylindroides T2-87] Length = 405 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 16/92 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-------- 55 I +LF G+GG RL E+ + F S+ P +T AN FGD Sbjct: 5 ICELFAGVGGFRLGFERADSGWKTTWF--SQWEP-GARTQWANQCYVQHFGDSPDINGEF 61 Query: 56 -----IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 I+ + IPDH +L+ GFPCQ +S A Sbjct: 62 HTCEDISTVDKNAIPDHTLLVGGFPCQDYSVA 93 >gi|119485563|ref|ZP_01619838.1| modification methylase [Lyngbya sp. PCC 8106] gi|119456888|gb|EAW38015.1| modification methylase [Lyngbya sp. PCC 8106] Length = 317 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +++ DLF G GG+ L L+Q FN V F E ++K YQ NF + + G++ +++ Sbjct: 1 MRVVDLFAGCGGLSLGLQQAGFN--IVAAFDDWE---SAIKVYQKNFAHPIFSGNLQEVQ 55 Query: 61 TQ-DIP---DHDVLLAGFPCQPFSQAG 83 T D+ +V++ G PCQ FS AG Sbjct: 56 TAVDLIKPFSPNVIVGGPPCQDFSSAG 82 >gi|330835884|ref|YP_004410612.1| DNA-cytosine methyltransferase [Metallosphaera cuprina Ar-4] gi|329568023|gb|AEB96128.1| DNA-cytosine methyltransferase [Metallosphaera cuprina Ar-4] Length = 321 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 K+ DLF G GG + F + E + ++N + +TY +NFP T++ DI + Sbjct: 5 KVVDLFSGAGG----FAKGFKLQGFEISLAIDLNHAAARTYSSNFPTATVLEEDIRNVTG 60 Query: 62 QDI-----PDHDVLLAGFPCQPFSQA 82 +DI DV++ PC+PF+ A Sbjct: 61 KDIIGLIGSRPDVVIGSPPCEPFTGA 86 >gi|325845888|ref|ZP_08169086.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481794|gb|EGC84826.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 434 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 16/97 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFN----------HRNVECFFSSEINPYS-----VKTYQAN 46 L + +LF G+GG R+ L + N + + + ++++ P + + Y Sbjct: 3 LTVVELFAGVGGFRVGLNKVTNFDEKSGKAIENGDWKFLWANQWEPSTKSQPAFECYSKR 62 Query: 47 FPNTLIFG-DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 F ++ DI K+ + IP+H++L+ GFPCQ +S A Sbjct: 63 FNESMNSNIDINKVNKESIPNHNLLVGGFPCQDYSVA 99 >gi|257058000|ref|YP_003135888.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|256588166|gb|ACU99052.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 423 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L + +LF G GG+ L LE ++ EI+ V T Q N P +I D+ KI Sbjct: 73 LSVIELFAGCGGMALGLENA----GLKTELLVEIDRDCVNTLQKNRPYWPIIQEDVTKID 128 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 + D++L GFPCQ FS AG Sbjct: 129 FRSYQGKIDIVLGGFPCQAFSYAG 152 >gi|83859530|ref|ZP_00953050.1| DNA-cytosine methyltransferase [Oceanicaulis alexandrii HTCC2633] gi|83851889|gb|EAP89743.1| DNA-cytosine methyltransferase [Oceanicaulis alexandrii HTCC2633] Length = 394 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDI 64 + FCG G RL L + C F+++I+ Y+ NF + GD+ +K D+ Sbjct: 15 EFFCGGGMARLGLGAHW-----RCHFANDIDADKANAYRDNFGDDHFHQGDVCALKPSDL 69 Query: 65 P-DHDVLLAGFPCQPFSQAG 83 P + D+ A FPCQ S AG Sbjct: 70 PGEADLAWASFPCQDLSLAG 89 >gi|304388871|ref|ZP_07370921.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|302028149|gb|ADK90963.1| unknown [Neisseria meningitidis] gi|304337164|gb|EFM03348.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|316985914|gb|EFV64853.1| modification methylase HphIA [Neisseria meningitidis H44/76] gi|325143322|gb|EGC65656.1| cytosine-specificmethyltransferase HphIA [Neisseria meningitidis 961-5945] Length = 276 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 L DLF G GG+ L EQ + S E+ +TY+ NFP + L+ D+ + Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLT 60 Query: 61 TQDIPD------HDVLLAGFPCQPFSQAG 83 QD+ + D+++ G PCQ FS AG Sbjct: 61 EQDLINCLNGQAVDLIIGGPPCQGFSMAG 89 >gi|325144138|gb|EGC66445.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240013] gi|325200491|gb|ADY95946.1| DNA-cytosine methyltransferase [Neisseria meningitidis H44/76] Length = 406 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFP--NTLIFGDIA 57 +++ +F GIG + EQ F+ N+ FS +I+PY K+Y N+ DI Sbjct: 33 IRLATVFSGIGAV----EQAFHRLNLNHTIVFSGDIDPYVKKSYLGNYKLNEDFWHNDIT 88 Query: 58 KIKTQDIPDH-DVLLAGFPCQPFSQAG 83 + + + D+L+ G PCQ FS G Sbjct: 89 QFDARKFRNQVDILVGGSPCQAFSMVG 115 >gi|91213886|ref|YP_543872.1| hypothetical protein UTI89_C4938 [Escherichia coli UTI89] gi|110644679|ref|YP_672409.1| modification methylase [Escherichia coli 536] gi|191170832|ref|ZP_03032384.1| modification methylase HgiDII [Escherichia coli F11] gi|300974517|ref|ZP_07172633.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1] gi|91075460|gb|ABE10341.1| hypothetical protein UTI89_C4938 [Escherichia coli UTI89] gi|110346271|gb|ABG72508.1| modification methylase [Escherichia coli 536] gi|190909056|gb|EDV68643.1| modification methylase HgiDII [Escherichia coli F11] gi|300308872|gb|EFJ63392.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1] gi|307629406|gb|ADN73710.1| DNA-cytosine methyltransferase [Escherichia coli UM146] gi|315290903|gb|EFU50272.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 153-1] gi|324010993|gb|EGB80212.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 60-1] Length = 348 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 13/87 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + D FCG GG L Q + +I+ + +T++ANFP+ I DI KI+ Q Sbjct: 3 VIDFFCGCGGASEGLRQA----GFDIELGLDIDQQASETFKANFPDAKFIQDDIRKIEPQ 58 Query: 63 DIPD-------HDVLLAG-FPCQPFSQ 81 DI D +LL+ PCQPFSQ Sbjct: 59 DISDIIDIKAKRPLLLSACAPCQPFSQ 85 >gi|262171500|ref|ZP_06039178.1| modification methylase PspPI (Cytosine-specific methyltransferase PspPI) (M.PspPI) [Vibrio mimicus MB-451] gi|261892576|gb|EEY38562.1| modification methylase PspPI (Cytosine-specific methyltransferase PspPI) (M.PspPI) [Vibrio mimicus MB-451] Length = 416 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 6/83 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 K+ +LF G GG+ L +EQ ++ F +E++ Y+ +T + N P ++ GDI+KI Sbjct: 79 KLVELFAGGGGLALGMEQA----GLQSIFLNELDKYACETLRHNRPEWNVVEGDISKIDF 134 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 I + D+L GFPCQ FS AG Sbjct: 135 TTITEPVDILTGGFPCQAFSYAG 157 >gi|228478395|ref|ZP_04063003.1| modification methylase HaeIII [Streptococcus salivarius SK126] gi|228250074|gb|EEK09344.1| modification methylase HaeIII [Streptococcus salivarius SK126] Length = 387 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 14/97 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN------VECFFSSEINPYSVKTYQANFPN-TLIF 53 M+++ DLF G GG+ + T + N F++E N + + ++ N+P T+I Sbjct: 1 MIEVIDLFSGAGGLTFGFQNTIKNNNFVFRNDFNIRFANEFNRDAAEAFRLNYPEITMIE 60 Query: 54 GDIAKI-----KTQDIPDH--DVLLAGFPCQPFSQAG 83 DIA I K++ I D+++ G PCQ FS G Sbjct: 61 DDIANIDESFLKSKGISPKGVDLVIGGPPCQSFSTVG 97 >gi|257464589|ref|ZP_05628960.1| putative 5-methylcytosine methyltransferase [Actinobacillus minor 202] gi|257450249|gb|EEV24292.1| putative 5-methylcytosine methyltransferase [Actinobacillus minor 202] Length = 331 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 L DLF G GG L F+ S EI PY +TY+ANFP I D+ ++ Sbjct: 3 LTYIDLFSGAGGFSLG----FDRVGFCQLLSVEIEPYYCETYRANFPKHHILQRDLTELP 58 Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83 ++ DV++ G PCQ FS AG Sbjct: 59 DDELLVLLDNQKVDVVIGGPPCQGFSMAG 87 >gi|15676724|ref|NP_273868.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis MC58] gi|7226061|gb|AAF41239.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis MC58] gi|308389005|gb|ADO31325.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha710] gi|316984499|gb|EFV63467.1| modification methylase HpaII [Neisseria meningitidis H44/76] gi|325129944|gb|EGC52743.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304] gi|325140023|gb|EGC62552.1| DNA-cytosine methyltransferase [Neisseria meningitidis CU385] gi|325206334|gb|ADZ01787.1| DNA-cytosine methyltransferase [Neisseria meningitidis M04-240196] Length = 411 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFP--NTLIFGDIA 57 +++ +F GIG + EQ F+ N+ FS +I+PY K+Y N+ DI Sbjct: 38 IRLATVFSGIGAV----EQAFHRLNLNHTIVFSGDIDPYVKKSYLGNYKLNEDFWHNDIT 93 Query: 58 KIKTQDIPDH-DVLLAGFPCQPFSQAG 83 + + + D+L+ G PCQ FS G Sbjct: 94 QFDARKFRNQVDILVGGSPCQAFSMVG 120 >gi|68249848|ref|YP_248960.1| modification methylase Bsp6I-like [Haemophilus influenzae 86-028NP] gi|68058047|gb|AAX88300.1| modification methylase Bsp6I-like [Haemophilus influenzae 86-028NP] Length = 387 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIA----KIKTQDIPDHDVLLAGFPCQPFSQAG 83 SEI P+ ++PN GD+ KI ++IP DVL+ G PCQ FS AG Sbjct: 28 SEIEPFPCAVLAYHYPNIPNLGDMTTLPEKILNREIPAPDVLVGGTPCQAFSVAG 82 >gi|157952312|ref|YP_001497204.1| hypothetical protein NY2A_B008R [Paramecium bursaria Chlorella virus NY2A] gi|155122539|gb|ABT14407.1| hypothetical protein NY2A_B008R [Paramecium bursaria Chlorella virus NY2A] Length = 331 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHR--NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 L+ LF G GG TF + V+ SE++ ++KT+ +N P+ + GD++ I Sbjct: 4 LRAISLFAGAGG------DTFGMKLAGVDVVAFSELDADAMKTHNSNNPDCVALGDVSLI 57 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + + D++ AGFPCQ FS AG Sbjct: 58 DEAMLSQFVNIDIIFAGFPCQGFSNAG 84 >gi|254673893|emb|CBA09676.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha275] Length = 326 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 L DLF G GG+ L EQ + S E+ +TY+ NFP + L+ D+ + Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLT 60 Query: 61 TQDIPD------HDVLLAGFPCQPFSQAG 83 QD+ + D+++ G PCQ FS AG Sbjct: 61 EQDLINCLNGQAVDLIIGGPPCQGFSMAG 89 >gi|229844460|ref|ZP_04464600.1| modification methylase Bsp6I-like protein [Haemophilus influenzae 6P18H1] gi|229812709|gb|EEP48398.1| modification methylase Bsp6I-like protein [Haemophilus influenzae 6P18H1] Length = 387 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIA----KIKTQDIPDHDVLLAGFPCQPFSQAG 83 SEI P+ ++PN GD+ KI ++IP DVL+ G PCQ FS AG Sbjct: 28 SEIEPFPCAVLAYHYPNIPNLGDMTTLPEKILNREIPAPDVLVGGTPCQAFSVAG 82 >gi|255022454|ref|ZP_05294440.1| hypothetical protein LmonocyFSL_01025 [Listeria monocytogenes FSL J1-208] Length = 150 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 9/83 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKIK--- 60 DLF G+GG RL +E H+ C EI+ Y+ +Y A F DI I Sbjct: 15 DLFAGVGGFRLGMEAA-GHK---CVGYVEIDKYARTSYTAIHQTEGEFEGHDITSISDDV 70 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + I D++ GFPCQ FS AG Sbjct: 71 IRSIGRVDIITGGFPCQAFSIAG 93 >gi|240143787|ref|ZP_04742388.1| Phi-3T prophage-derived modification methylase Phi3TI [Roseburia intestinalis L1-82] gi|257204222|gb|EEV02507.1| Phi-3T prophage-derived modification methylase Phi3TI [Roseburia intestinalis L1-82] Length = 333 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 4/80 (5%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + D FCG GG+ + F + + + + + Y+V++Y N + + DI ++ QD Sbjct: 5 VNDFFCGCGGMGV----GFLNAGYKIAGAWDFDKYAVQSYDHNVGHHVKQADIKEMTWQD 60 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P V GFPCQ S AG Sbjct: 61 VPFAHVWAFGFPCQDLSVAG 80 >gi|332796494|ref|YP_004457994.1| DNA-cytosine methyltransferase [Acidianus hospitalis W1] gi|332694229|gb|AEE93696.1| DNA-cytosine methyltransferase [Acidianus hospitalis W1] Length = 323 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 LK+ DLF G GG L F ++ + +IN + + Y NFP+T++ DI + Sbjct: 3 LKVVDLFSGAGGFSLG----FKNQGFNIALAIDINHAAARAYAQNFPSTVVLEEDIRNVT 58 Query: 61 TQDIPD-----HDVLLAGFPCQPFSQA 82 ++I D D+L+ PC+ F+ A Sbjct: 59 GEEIIDILGSSPDILIGSPPCEGFTAA 85 >gi|119489697|ref|ZP_01622456.1| putative 5-methylcytosine methyltransferase [Lyngbya sp. PCC 8106] gi|119454434|gb|EAW35583.1| putative 5-methylcytosine methyltransferase [Lyngbya sp. PCC 8106] Length = 384 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 11/85 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDI 64 DLF G GG+ LEQ EC + + S++T+QAN + +I GD+ +I +DI Sbjct: 7 DLFSGAGGMSCGLEQA----GFECILGIDQDKASLETFQANHHHANIICGDLREITLEDI 62 Query: 65 PDH------DVLLAGFPCQPFSQAG 83 + D++ G PCQ FS G Sbjct: 63 YEQIDNQTVDLICGGPPCQGFSTIG 87 >gi|294782269|ref|ZP_06747595.1| modification methylase Sau3AI [Fusobacterium sp. 1_1_41FAA] gi|294480910|gb|EFG28685.1| modification methylase Sau3AI [Fusobacterium sp. 1_1_41FAA] Length = 423 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 15/96 (15%) Query: 2 LKITDLFCGIGGIRLDLE---------QTFNHRNVECFFSSEINP-----YSVKTYQANF 47 L + +LF G+GG R+ L + + E ++++ P Y+ Y F Sbjct: 3 LTVIELFAGVGGFRVGLNNIIKIDSQNKAVENGKWEFIWANQFEPSTKAQYAFDCYVTRF 62 Query: 48 PNTLIFG-DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 I DI K+K IP H +L+ GFPCQ +S A Sbjct: 63 GKENISNEDINKVKKNLIPKHSLLVGGFPCQDYSVA 98 >gi|221236677|ref|YP_002519114.1| DNA-cytosine methyltransferase [Caulobacter crescentus NA1000] gi|220965850|gb|ACL97206.1| DNA-cytosine methyltransferase [Caulobacter crescentus NA1000] Length = 381 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 8/81 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIAKI 59 + + F G G RL L + C F+++ +P TY+ANF + GD+ + Sbjct: 15 RFLEFFAGGGMARLGLGADW-----ACAFANDFDPVKAATYRANFADAGKHFQEGDVFAL 69 Query: 60 KTQDIPDHDVLLAGFPCQPFS 80 + +PD D+ A PCQ FS Sbjct: 70 SAERLPDADLAWASSPCQDFS 90 >gi|16127856|ref|NP_422420.1| DNA-cytosine methyltransferase [Caulobacter crescentus CB15] gi|13425378|gb|AAK25588.1| DNA-cytosine methyltransferase [Caulobacter crescentus CB15] Length = 374 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 8/81 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIAKI 59 + + F G G RL L + C F+++ +P TY+ANF + GD+ + Sbjct: 8 RFLEFFAGGGMARLGLGADW-----ACAFANDFDPVKAATYRANFADAGKHFQEGDVFAL 62 Query: 60 KTQDIPDHDVLLAGFPCQPFS 80 + +PD D+ A PCQ FS Sbjct: 63 SAERLPDADLAWASSPCQDFS 83 >gi|329122250|ref|ZP_08250838.1| DNA (cytosine-5-)-methyltransferase [Haemophilus aegyptius ATCC 11116] gi|327473811|gb|EGF19228.1| DNA (cytosine-5-)-methyltransferase [Haemophilus aegyptius ATCC 11116] Length = 387 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIA----KIKTQDIPDHDVLLAGFPCQPFSQAG 83 SEI P+ ++PN GD+ KI ++IP DVL+ G PCQ FS AG Sbjct: 28 SEIEPFPCAVLAYHYPNIPNLGDMTTLPEKILNREIPAPDVLVGGTPCQAFSVAG 82 >gi|325133150|gb|EGC55821.1| modification methylase HphIA [Neisseria meningitidis M6190] gi|325138766|gb|EGC61318.1| modification methylase HphIA [Neisseria meningitidis ES14902] gi|325197365|gb|ADY92821.1| modification methylase HphIA [Neisseria meningitidis G2136] gi|325203202|gb|ADY98655.1| modification methylase HphIA [Neisseria meningitidis M01-240355] Length = 332 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 L DLF G GG+ L EQ + S E+ +TY+ NFP + L+ D+ + Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLT 60 Query: 61 TQDIPD------HDVLLAGFPCQPFSQAG 83 QD+ + D+++ G PCQ FS AG Sbjct: 61 EQDLINCLNGQAVDLIIGGPPCQGFSMAG 89 >gi|296503162|ref|YP_003664862.1| type II restriction-modification system methylation subunit [Bacillus thuringiensis BMB171] gi|296324214|gb|ADH07142.1| Type II restriction-modification system methylation subunit [Bacillus thuringiensis BMB171] Length = 251 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DL GI GI + + + C EI ++ K + N+PN IF D+ K+ Sbjct: 1 MKMLDLCSGIAGISMAADWAGINTAAFC----EIEEFNQKVLRKNYPNIPIFPDLYKLTK 56 Query: 62 Q-------DIPDHDVLLAGFPCQPFSQAG 83 Q D+ V+ AG+PCQ S AG Sbjct: 57 QSLIDGGVDVDSIGVISAGYPCQGESMAG 85 >gi|87310990|ref|ZP_01093115.1| DNA-cytosine methyltransferase [Blastopirellula marina DSM 3645] gi|87286280|gb|EAQ78189.1| DNA-cytosine methyltransferase [Blastopirellula marina DSM 3645] Length = 385 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 6/80 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKIKTQD 63 + F GIG +RL LE+ E F+++I+ + Y+A+F GD+ ++ Sbjct: 11 EFFAGIGLVRLGLERA----GWEVRFANDIDAAKHRQYEAHFGADEAFALGDVHQLDAAA 66 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 IPD + A FPC S AG Sbjct: 67 IPDVTLATASFPCTDLSLAG 86 >gi|306817606|ref|ZP_07451349.1| modification methylase Eco47II [Mobiluncus mulieris ATCC 35239] gi|307699879|ref|ZP_07636930.1| DNA binding domain protein, excisionase family [Mobiluncus mulieris FB024-16] gi|304649648|gb|EFM46930.1| modification methylase Eco47II [Mobiluncus mulieris ATCC 35239] gi|307614917|gb|EFN94135.1| DNA binding domain protein, excisionase family [Mobiluncus mulieris FB024-16] Length = 424 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 8/81 (9%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 DLF G GG L LE F H SE++ +V T + N PN + GD+A + + Sbjct: 81 DLFAGAGGTALGLENAGFRH-----VLLSELDKDAVATLRLNRPNWNVSAGDVASLDFRA 135 Query: 64 IPDH-DVLLAGFPCQPFSQAG 83 D++ GFPCQ FS AG Sbjct: 136 FAGKVDLVEGGFPCQAFSYAG 156 >gi|269976186|ref|ZP_06183182.1| modification methylase Eco47II [Mobiluncus mulieris 28-1] gi|269935515|gb|EEZ92053.1| modification methylase Eco47II [Mobiluncus mulieris 28-1] Length = 424 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 8/81 (9%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 DLF G GG L LE F H SE++ +V T + N PN + GD+A + + Sbjct: 81 DLFAGAGGTALGLENAGFRH-----VLLSELDKDAVATLRLNRPNWNVSAGDVASLDFRA 135 Query: 64 IPDH-DVLLAGFPCQPFSQAG 83 D++ GFPCQ FS AG Sbjct: 136 FAGKVDLVEGGFPCQAFSYAG 156 >gi|227876656|ref|ZP_03994765.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC 35243] gi|227842553|gb|EEJ52753.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC 35243] Length = 424 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 8/81 (9%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 DLF G GG L LE F H SE++ +V T + N PN + GD+A + + Sbjct: 81 DLFAGAGGTALGLENAGFRH-----VLLSELDKDAVATLRLNRPNWNVSAGDVASLDFRA 135 Query: 64 IPDH-DVLLAGFPCQPFSQAG 83 D++ GFPCQ FS AG Sbjct: 136 FAGKVDLVEGGFPCQAFSYAG 156 >gi|304411687|ref|ZP_07393299.1| DNA-cytosine methyltransferase [Shewanella baltica OS183] gi|307306261|ref|ZP_07586006.1| DNA-cytosine methyltransferase [Shewanella baltica BA175] gi|304349875|gb|EFM14281.1| DNA-cytosine methyltransferase [Shewanella baltica OS183] gi|306911134|gb|EFN41561.1| DNA-cytosine methyltransferase [Shewanella baltica BA175] Length = 371 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 20/100 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIF---GDI 56 + I DLF G GG+ L + + C + E+NP + TY+ NF L+ GDI Sbjct: 26 VSIVDLFSGCGGLTLGALEAARKHQLTCNIKLAVELNPEAANTYEENFSENLLNLHKGDI 85 Query: 57 AKIKTQDIPDH---------------DVLLAGFPCQPFSQ 81 ++I T D+ DVLLAG PCQ S+ Sbjct: 86 SEIITNYPGDNISEIEEKVRFQNNNIDVLLAGPPCQGHSR 125 >gi|212710423|ref|ZP_03318551.1| hypothetical protein PROVALCAL_01485 [Providencia alcalifaciens DSM 30120] gi|212686843|gb|EEB46371.1| hypothetical protein PROVALCAL_01485 [Providencia alcalifaciens DSM 30120] Length = 330 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 7/83 (8%) Query: 3 KITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +I F G GG+ L EQ FN +++E + TY+ N P+T L I I Sbjct: 4 RIVSFFAGAGGLDLGFEQAGFN-----VIWANEFDKDIWATYKKNHPHTELDQRSITNIT 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + ++P+ D ++ G PCQ +S+AG Sbjct: 59 SDEVPECDGIIGGPPCQSWSEAG 81 >gi|145629891|ref|ZP_01785682.1| modification methylase Bsp6I-like protein [Haemophilus influenzae 22.1-21] gi|144977718|gb|EDJ87668.1| modification methylase Bsp6I-like protein [Haemophilus influenzae 22.1-21] Length = 411 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIA----KIKTQDIPDHDVLLAGFPCQPFSQAG 83 SEI P+ ++PN GD+ KI ++IP DVL+ G PCQ FS AG Sbjct: 15 SEIEPFPCAVLTYHYPNIPNLGDMTTLPEKILNREIPAPDVLVGGTPCQAFSIAG 69 >gi|148827577|ref|YP_001292330.1| hypothetical protein CGSHiGG_05020 [Haemophilus influenzae PittGG] gi|319775697|ref|YP_004138185.1| Cytosine-specific methyltransferase (pseudogene) [Haemophilus influenzae F3047] gi|319896763|ref|YP_004134957.1| cytosine-specific methyltransferase [Haemophilus influenzae F3031] gi|148718819|gb|ABQ99946.1| hypothetical protein CGSHiGG_05020 [Haemophilus influenzae PittGG] gi|317432266|emb|CBY80618.1| Cytosine-specific methyltransferase [Haemophilus influenzae F3031] gi|317450288|emb|CBY86504.1| Cytosine-specific methyltransferase (pseudogene) [Haemophilus influenzae F3047] Length = 424 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIA----KIKTQDIPDHDVLLAGFPCQPFSQAG 83 SEI P+ ++PN GD+ KI ++IP DVL+ G PCQ FS AG Sbjct: 28 SEIEPFPCAVLTYHYPNIPNLGDMTTLPEKILNREIPAPDVLVGGTPCQAFSIAG 82 >gi|265751237|ref|ZP_06087300.1| DNA-cytosine methyltransferase [Bacteroides sp. 3_1_33FAA] gi|270294602|ref|ZP_06200804.1| DNA-cytosine methyltransferase [Bacteroides sp. D20] gi|263238133|gb|EEZ23583.1| DNA-cytosine methyltransferase [Bacteroides sp. 3_1_33FAA] gi|270276069|gb|EFA21929.1| DNA-cytosine methyltransferase [Bacteroides sp. D20] Length = 335 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +++ LF G GG+ L + F ++I P T++ANFP LI GDI I Sbjct: 1 MELISLFSGAGGLDLGFHKAGFRTVTANEFDAKICP----TFRANFPEVNLIEGDIRDIP 56 Query: 61 TQDIPDHDV-LLAGFPCQPFSQAG 83 + + PD+ ++ G PCQ +S+AG Sbjct: 57 SCEFPDNITGIIGGPPCQSWSEAG 80 >gi|9632187|ref|NP_049039.1| hypothetical protein PBCV1_A683L [Paramecium bursaria Chlorella virus 1] gi|2447129|gb|AAC96987.1| nonfunctional M.CviAV cytosine DNA methyltransferase [Paramecium bursaria Chlorella virus 1] Length = 367 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 8/84 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFS-SEINPYSVKTYQANFPNTLIFGDIAKIK 60 + +LF GI GI L R + + EIN + K + F + +F D+ K Sbjct: 3 FRTLELFAGIAGISHGL------RGISTPVAFVEINEDAQKFLKTKFSDASVFNDVTKFT 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 D P D D++ AGFPC FS AG Sbjct: 57 KSDFPEDIDMITAGFPCTGFSIAG 80 >gi|289167263|ref|YP_003445530.1| type II DNA modification enzyme (methyltransferase cytosine-specific) [Streptococcus mitis B6] gi|288906828|emb|CBJ21662.1| type II DNA modification enzyme (methyltransferase cytosine-specific) [Streptococcus mitis B6] Length = 387 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 14/97 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQT-----FNHRN-VECFFSSEINPYSVKTYQANFPN-TLIF 53 M+++ DLF G GG+ + T F RN F++E N + + ++ N+P T+I Sbjct: 1 MIEVVDLFSGAGGLTFGFQNTIKNNKFVSRNDFNIRFANEFNHDAAEAFRQNYPGVTMIE 60 Query: 54 GDIAKI-----KTQDIPDH--DVLLAGFPCQPFSQAG 83 DIA I K++ I D+++ G PCQ FS G Sbjct: 61 EDIANIDEHFLKSKGISSKRVDLVIGGPPCQSFSTVG 97 >gi|169829195|ref|YP_001699353.1| modification methylase SPRI [Lysinibacillus sphaericus C3-41] gi|168993683|gb|ACA41223.1| Modification methylase SPRI [Lysinibacillus sphaericus C3-41] Length = 418 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 ++ D F GIGG RL +EQ + C E + ++ K+Y+A N DI + Sbjct: 1 MQFLDFFAGIGGFRLGMEQAGH----TCAGYVEWDKFARKSYEAIHNTEGEWTAHDITTV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 ++ D++ GFPCQ FS AG Sbjct: 57 SDEEFSKFRGTVDIICGGFPCQAFSVAG 84 >gi|547931|sp|P36216|MTC1_PBCVI RecName: Full=Modification methylase CviJI; Short=M.CviJI; AltName: Full=Cytosine-specific methyltransferase CviJI gi|323315|gb|AAA88826.1| cytosine methyltransferase [Paramecium bursaria Chlorella virus IL3A] gi|483782|gb|AAC55063.1| cytosine methyltransferase [Chlorella virus] Length = 367 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 8/84 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFS-SEINPYSVKTYQANFPNTLIFGDIAKIK 60 + +LF GI GI L R + + EIN + K + F + +F D+ K Sbjct: 3 FRTLELFAGIAGISHGL------RGISTPVAFVEINEDAQKFLKTKFSDASVFNDVTKFT 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 D P D D++ AGFPC FS AG Sbjct: 57 KSDFPEDIDMITAGFPCTGFSIAG 80 >gi|227431785|ref|ZP_03913812.1| possible DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352468|gb|EEJ42667.1| possible DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 448 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K DLF GIGG RL LE++ H V EI+ ++ ++YQA N DI K+ Sbjct: 1 MKFLDLFSGIGGFRLGLERS-GHTPVGYV---EIDKFARQSYQAMYNTDGEWTAEDINKV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 ++ +++ GFPCQ FS AG Sbjct: 57 TDEEWRKFNGTVELIAGGFPCQSFSIAG 84 >gi|228962260|ref|ZP_04123693.1| Phage-related DNA methylase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228797429|gb|EEM44609.1| Phage-related DNA methylase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 180 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 L DLF GIG R+ +E+ H+ C E N + +Y+A + DI + Sbjct: 3 LTFIDLFAGIGMFRIGMEKA-GHK---CIGWVEWNKPARTSYEAMHDTKGEWTENDIRNV 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 IP DV AGFPCQ S+ G Sbjct: 59 TGTGIPAADVWCAGFPCQDISKNG 82 >gi|304372874|ref|YP_003856083.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1] gi|304309065|gb|ADM21545.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1] Length = 413 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 44/96 (45%), Gaps = 21/96 (21%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF G GG+ L E S EI P +V+TY NF N ++ I+T+ Sbjct: 93 KFIDLFSGAGGLSCGLVMA----GFEPIASVEIMPDAVETYVYNFQNRKKKEEL--IETR 146 Query: 63 DI---------------PDHDVLLAGFPCQPFSQAG 83 DI D D+++ GFPCQ FS AG Sbjct: 147 DIRDVKVKEELYNKFKDTDIDLIVGGFPCQGFSMAG 182 >gi|330985029|gb|EGH83132.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 422 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 8/84 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKIK 60 + + F G G R L + +C F+++ +P + Y+ N+ L+ DI K+ Sbjct: 33 RFYEFFAGGGMARAGLGDGW-----DCLFANDFDPMKGRAYRDNWGGGLDLMVEDINKLT 87 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 T+ +PD D++ A FPCQ S AG Sbjct: 88 TEQLPDQADLVWASFPCQDLSLAG 111 >gi|323650463|gb|ADX97312.1| M.FspI [Fischerella muscicola SAG 1427-1] Length = 385 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 13/88 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 K+ DLF G GG L F+ E + +++ + TY+ N+PNT +I DI KI Sbjct: 4 KVIDLFAGAGG----LTTGFHMAGFESLCAIDVDAKPLATYKHNYPNTKIIHQDIRKINP 59 Query: 62 QDI--------PDHDVLLAGFPCQPFSQ 81 D+ + L+ G PCQ FS+ Sbjct: 60 SDLRLALGLQREELTALIGGPPCQGFSR 87 >gi|325979448|ref|YP_004289164.1| DNA (cytosine-5-)-methyltransferase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325179376|emb|CBZ49420.1| DNA (cytosine-5-)-methyltransferase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 333 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +K +LF G GG+ L +E+ E E + + +T + N PN +I D+A I Sbjct: 1 MKSIELFAGAGGLALGIEKA----GFETIGLIEFDSAAAETLKYNRPNWNVIHDDVANIS 56 Query: 61 TQDIPDH--------DVLLAGFPCQPFSQAG 83 D+ D+ D+L G PCQ FS AG Sbjct: 57 KLDLEDYFSIRKGELDLLSGGAPCQSFSYAG 87 >gi|116492328|ref|YP_804063.1| site-specific DNA methylase [Pediococcus pentosaceus ATCC 25745] gi|116102478|gb|ABJ67621.1| Site-specific DNA methylase [Pediococcus pentosaceus ATCC 25745] Length = 428 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-----SVKTYQANFPNTL-IFGD 55 LK+ +LF G+GG R+ LE N + +S++ P + + Y +FPN+ I + Sbjct: 5 LKVLELFAGVGGFRVGLEHA-NASLYKTLWSNQWEPGKKSQDAFEVYNYHFPNSENINEN 63 Query: 56 IAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 I++I + + D+++ GFPCQ +S A Sbjct: 64 ISEISNEKFKTMNADLIVGGFPCQDYSVA 92 >gi|283796860|ref|ZP_06346013.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. M62/1] gi|291075266|gb|EFE12630.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. M62/1] Length = 547 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G GG L F R + ++SEI P+ + NFP GDI K+ Sbjct: 5 ITMGSLFSGSGGFEL-AGSIFGIRPI---WASEIEPFPILVTTKNFPEMKHLGDINKLNG 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+ ++ G PCQ S AG Sbjct: 61 ADLEPVTIIAGGSPCQDMSIAG 82 >gi|332704951|ref|ZP_08425037.1| DNA-methyltransferase (dcm) [Lyngbya majuscula 3L] gi|332356303|gb|EGJ35757.1| DNA-methyltransferase (dcm) [Lyngbya majuscula 3L] Length = 360 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 5/76 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDI 64 DLF G GG+ L F+ + + EI+ +V TY+ NFP+T +I D+ I Sbjct: 9 DLFAGAGGLSLG----FHMAGWQITTAIEIDKSAVSTYRENFPSTNVIRSDVRAIDFTQF 64 Query: 65 PDHDVLLAGFPCQPFS 80 D+++ PCQPFS Sbjct: 65 QGIDLVVGSPPCQPFS 80 >gi|291539796|emb|CBL12907.1| Site-specific DNA methylase [Roseburia intestinalis XB6B4] Length = 107 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 12/83 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLFCG GG+ L LEQ+ N+ EIN + +TY N ++ DI I +I Sbjct: 12 DLFCGAGGLSLGLEQS----NITVPLGVEINAIAAQTYTNNLNGNVLQDDIRNITGHEIL 67 Query: 66 DH-------DVLLAGF-PCQPFS 80 + LLAG PCQ FS Sbjct: 68 EQLNLQVGELFLLAGCPPCQTFS 90 >gi|209524941|ref|ZP_03273486.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209494590|gb|EDZ94900.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 442 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 18/88 (20%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--------PNTLIFGDI 56 DLF GIGG R+ LE + +C SEI S++ Y+ NF PN GD+ Sbjct: 18 VDLFSGIGGFRIALE----NWGGKCLGYSEIAANSIQVYKQNFIRDANLDEPN---LGDM 70 Query: 57 AKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 + +P D++ G PCQP+S AG Sbjct: 71 RSL--HKLPFTVDLITGGVPCQPWSIAG 96 >gi|314055145|ref|YP_004063483.1| putative cytosine-specific methyltransferase [Ostreococcus tauri virus 2] gi|313575036|emb|CBI70049.1| putative cytosine-specific methyltransferase [Ostreococcus tauri virus 2] Length = 349 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDIP 65 LF G GG L + + ++ SE+ +T++ NF N+ LI GDI KI +D Sbjct: 9 LFSGCGGDTLGM----TNAGIDVVAYSELKTKFQETHELNFKNSKLIGGDINKITDEDFE 64 Query: 66 DH----DVLLAGFPCQPFSQAG 83 D++ GFPCQ FS AG Sbjct: 65 KLSGKIDIIFGGFPCQSFSNAG 86 >gi|312902257|ref|ZP_07761465.1| helix-turn-helix protein [Enterococcus faecalis TX0635] gi|283466064|emb|CBG92839.1| hypothetical protein [Enterococcus casseliflavus] gi|310634316|gb|EFQ17599.1| helix-turn-helix protein [Enterococcus faecalis TX0635] Length = 470 Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 16/91 (17%) Query: 4 ITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 + + F G GG+ L LE+ FN EI+ + T + N PN +I GDI I Sbjct: 137 LVETFAGAGGLSLGLEKAGFNS-----VADIEIDSTACSTLKLNRPNWNVIEGDINTIAQ 191 Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83 I +H DVL G+PCQ FS AG Sbjct: 192 NGIFNHEQFTFRGELDVLSGGYPCQSFSYAG 222 >gi|2558956|gb|AAC49849.1| Masc1 [Ascobolus immersus] Length = 537 Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 8/81 (9%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ--- 62 D FCG GG+ L Q +E ++ ++NP + Y+ NFPNT F A+ Q Sbjct: 231 DTFCGGGGVSLGARQA----GLEVKWAFDMNPNAGANYRRNFPNTDFFLAEAEQFIQLSV 286 Query: 63 DIPDH-DVLLAGFPCQPFSQA 82 I H D+L PCQ FS+A Sbjct: 287 GISQHVDILHLSPPCQTFSRA 307 >gi|224541047|ref|ZP_03681586.1| hypothetical protein CATMIT_00198 [Catenibacterium mitsuokai DSM 15897] gi|224526044|gb|EEF95149.1| hypothetical protein CATMIT_00198 [Catenibacterium mitsuokai DSM 15897] Length = 418 Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 21/102 (20%) Query: 2 LKITDLFCGIGGIRLDL---------EQTFNHRNVECFFSSEINP----------YSVKT 42 L + +LF G+GG R+ L ++ +RN + ++++ P Y + Sbjct: 3 LTVVELFAGVGGFRVGLNDIKSFDENDKAIENRNWKFVWANQFEPSTKTQPAYNCYCTRF 62 Query: 43 YQANFPNTLIFGDIAKIK--TQDIPDHDVLLAGFPCQPFSQA 82 + + NT I ++A + T IP+H +L+ GFPCQ +S A Sbjct: 63 GEEHTSNTDIQEEVAHLDEDTDYIPNHSLLVGGFPCQDYSVA 104 >gi|257867246|ref|ZP_05646899.1| DNA methyltransferase [Enterococcus casseliflavus EC30] gi|257873580|ref|ZP_05653233.1| DNA methyltransferase [Enterococcus casseliflavus EC10] gi|257801302|gb|EEV30232.1| DNA methyltransferase [Enterococcus casseliflavus EC30] gi|257807744|gb|EEV36566.1| DNA methyltransferase [Enterococcus casseliflavus EC10] Length = 470 Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 16/91 (17%) Query: 4 ITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 + + F G GG+ L LE+ FN EI+ + T + N PN +I GDI I Sbjct: 137 LVETFAGAGGLSLGLEKAGFNS-----VADIEIDSTACSTLKLNRPNWNVIEGDINTIAQ 191 Query: 62 QDIPDHD---------VLLAGFPCQPFSQAG 83 I +HD VL G+PCQ FS AG Sbjct: 192 NGIFNHDQFTFRGELDVLSGGYPCQSFSYAG 222 >gi|218895987|ref|YP_002444398.1| modification methylase DdeI [Bacillus cereus G9842] gi|218542827|gb|ACK95221.1| modification methylase DdeI [Bacillus cereus G9842] Length = 468 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 9/83 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAK-IK 60 DLFCG GG+ + LEQ N E F+ + + + K+Y N P ++ GDI + + Sbjct: 94 DLFCGAGGLSVGLEQY----NFEPIFALDFDLSASKSYLFNRPFLSESSFYNGDIKEFLL 149 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+P V++ G PCQ FS A Sbjct: 150 HNDLPKAPVIVGGPPCQGFSNAN 172 >gi|94968156|ref|YP_590204.1| DNA-cytosine methyltransferase [Candidatus Koribacter versatilis Ellin345] gi|94550206|gb|ABF40130.1| DNA-cytosine methyltransferase [Candidatus Koribacter versatilis Ellin345] Length = 359 Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 +L G GG L LEQ NH + EIN ++ +T + N PN ++ GD+ Sbjct: 47 ELCAGAGGQALGLEQAGINHVAL-----VEINKHACETLRLNRPNWKVVEGDLQTFDPSP 101 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D++ AG PC PFS AG Sbjct: 102 YKGADIVSAGLPCPPFSVAG 121 >gi|79835472|gb|ABB52097.1| Mod [Arthrospira platensis] Length = 321 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 11/85 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDI 64 DLF G+GGI Q F S EINP + T+Q NFPN F GD+ Sbjct: 80 DLFSGVGGI----TQGFWQAGFNPVASVEINPIASATHQRNFPNCHHFCGDVNDFNPHQW 135 Query: 65 ------PDHDVLLAGFPCQPFSQAG 83 P +++ G PCQ FS AG Sbjct: 136 LSKIGSPSVHLVVGGPPCQGFSVAG 160 >gi|269119458|ref|YP_003307635.1| DNA-cytosine methyltransferase [Sebaldella termitidis ATCC 33386] gi|268613336|gb|ACZ07704.1| DNA-cytosine methyltransferase [Sebaldella termitidis ATCC 33386] Length = 383 Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 M ++ + F GI L+ +H V F EI+ ++++ + N GDI+K+ Sbjct: 1 MPRVVEAFSGIRSQTQALKNLGIDHEVVATF---EIDKWAIEMAKLLHGNVNNLGDISKV 57 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +++P+HD+ FPCQ S AG Sbjct: 58 DPKEVPEHDLFTYTFPCQDISTAG 81 >gi|317127844|ref|YP_004094126.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] gi|315472792|gb|ADU29395.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] Length = 360 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 12/88 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 ++ DLF G GGI + F + + NP +V+T+ NF N+ I DI +IK Sbjct: 4 RVIDLFSGCGGI----SEGFRLAGFDILGGLDFNPDAVETFHQNFLNSRAICADIQEIKN 59 Query: 62 QDIP-------DHDVLLAGFPCQPFSQA 82 +I D DV++ G PCQ FS A Sbjct: 60 DEITYMFDLTGDIDVIVGGPPCQGFSSA 87 >gi|290343528|ref|YP_003494895.1| hypothetical protein OTV1_055 [Ostreococcus tauri virus 1] gi|260160943|emb|CAY39643.1| hypothetical protein OTV1_055 [Ostreococcus tauri virus 1] Length = 351 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 9/82 (10%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDIP 65 LF G GG L + V+ SE+ +T++ NF N+ LI GDI KI +D Sbjct: 11 LFSGCGGDTLGMVNA----GVDVVAYSELKTKFQETHELNFKNSKLIGGDINKITDEDFE 66 Query: 66 DH----DVLLAGFPCQPFSQAG 83 D++ GFPCQ FS AG Sbjct: 67 KLSGKIDIIFGGFPCQSFSNAG 88 >gi|228958671|ref|ZP_04120388.1| Prophage LambdaBa01, C-5 cytosine-specific DNA methylase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801009|gb|EEM47909.1| Prophage LambdaBa01, C-5 cytosine-specific DNA methylase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 251 Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DL GI GI + + C EI ++ K + N+PN IF D+ K+ Sbjct: 1 MKMLDLCSGIAGISMAADWAGIDTAAFC----EIEEFNQKVLRKNYPNIPIFPDLYKLTK 56 Query: 62 Q-------DIPDHDVLLAGFPCQPFSQAG 83 Q D+ V+ AG+PCQ S AG Sbjct: 57 QSLIDGGVDVDSIGVISAGYPCQGESMAG 85 >gi|325478716|gb|EGC81827.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus prevotii ACS-065-V-Col13] Length = 480 Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF G GG L F ++ ++SE+ P+ ++ Q N P GDI I Sbjct: 5 LRLGSLFDGSGG--FPLAAIFCE--IKPIWASEVEPFPIRVTQKNLPQVKHLGDINDIDG 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 I D++ G PCQ S AG Sbjct: 61 SGIEPVDIISFGSPCQDLSIAG 82 >gi|283834737|ref|ZP_06354478.1| modification methylase HgiDII [Citrobacter youngae ATCC 29220] gi|291068977|gb|EFE07086.1| modification methylase HgiDII [Citrobacter youngae ATCC 29220] Length = 351 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 13/88 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ D FCG GG + F + + + + +Y+ANFPNT I DI ++ Sbjct: 1 MKVIDFFCGCGGA----SKGFELAGFDIALGIDFDKSAADSYKANFPNTAFINSDIRNVR 56 Query: 61 TQDI----PDHD----VLLAGFPCQPFS 80 +DI PD + A PCQPFS Sbjct: 57 VRDIAEIVPDWKENDLIFCACAPCQPFS 84 >gi|51245886|ref|YP_065770.1| modification methylase [Desulfotalea psychrophila LSv54] gi|50876923|emb|CAG36763.1| probable modification methylase [Desulfotalea psychrophila LSv54] Length = 360 Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 15/97 (15%) Query: 2 LKITDLFCGIGGIRLDLEQ---TFNHRNVECF-----FSSEINPYSVKTYQANFPN---- 49 ++ +LFCG GGI L + +N+RN E F ++++ + + +TY N N Sbjct: 3 FELAELFCGPGGIALGAQLAGVVYNNRNNESFSIAPSWATDYDEATCRTYALNIHNSNEL 62 Query: 50 ---TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 T++ D+ ++ + + L GFPC FS G Sbjct: 63 DLDTVVCQDVRELDIEALRPRQALAFGFPCNDFSSVG 99 >gi|228469860|ref|ZP_04054799.1| modification methylase HaeIII [Porphyromonas uenonis 60-3] gi|228308495|gb|EEK17283.1| modification methylase HaeIII [Porphyromonas uenonis 60-3] Length = 359 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L F+ ++E + T++ NFP+ L+ GDI KI Sbjct: 3 MTLISLFSGAGGMDLG----FHKAGFTTILANEYDKTICPTFKHNFPDVPLLEGDIRKIP 58 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 + P H D ++ G PCQ +S+AG Sbjct: 59 ERLFPRHIDGIIGGPPCQSWSEAG 82 >gi|260910178|ref|ZP_05916855.1| site-specific DNA-methyltransferase [Prevotella sp. oral taxon 472 str. F0295] gi|260635682|gb|EEX53695.1| site-specific DNA-methyltransferase [Prevotella sp. oral taxon 472 str. F0295] Length = 403 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIG L RN+ F EIN + + +PN++ + DI ++ Sbjct: 11 LFSGIGAPEL-AATWMGWRNL---FHCEINDFCRTILRYWYPNSVSYEDIKTTNFEEWRG 66 Query: 67 H-DVLLAGFPCQPFSQAG 83 DVL GFPCQPFS AG Sbjct: 67 RVDVLTGGFPCQPFSAAG 84 >gi|75906326|ref|YP_320622.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] gi|75700051|gb|ABA19727.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] Length = 431 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 19/90 (21%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF------------ 53 DLF G GG+ L EQ + + EI+P ++ NFP + Sbjct: 21 DLFAGAGGMTLGFEQA----GFDVLAAVEIDPIHCAVHEYNFPFCSVLCKSVEETTGKEI 76 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D +KI QDI DV++ G PCQ FS G Sbjct: 77 RDRSKINNQDI---DVIICGSPCQGFSLMG 103 >gi|302348094|ref|YP_003815732.1| Cytosine-specific DNA methylase [Acidilobus saccharovorans 345-15] gi|302328506|gb|ADL18701.1| Cytosine-specific DNA methylase [Acidilobus saccharovorans 345-15] Length = 327 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 13/84 (15%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKIKT 61 DLF G GG + F + E +P KTY+ANFP T + D+++ Sbjct: 4 DLFSGAGG----FSRGFELAGFNVVAAVENDPPVAKTYKANFPETYLIADDIKDVSEPTI 59 Query: 62 QDIP-----DHDVLLAGFPCQPFS 80 +D+ D DV++A PC+PF+ Sbjct: 60 KDVSGYGRGDVDVVIASPPCEPFT 83 >gi|315613695|ref|ZP_07888602.1| modification methylase Sau3AI [Streptococcus sanguinis ATCC 49296] gi|315314386|gb|EFU62431.1| modification methylase Sau3AI [Streptococcus sanguinis ATCC 49296] Length = 421 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 15/92 (16%) Query: 2 LKITDLFCGIGGIRLDLE----QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA 57 +K+ +LF G+GG R+ LE Q F + + S + + + Y +FPN+ + Sbjct: 1 MKVLELFAGVGGFRIGLENADKQLFKTKWANQWEPSRKSQDAFEVYDYHFPNS----ENI 56 Query: 58 KIKTQDIPDH-------DVLLAGFPCQPFSQA 82 I DI D D+++ GFPCQ +S A Sbjct: 57 NISISDITDEQFSKMDADMIVGGFPCQDYSVA 88 >gi|304387865|ref|ZP_07370039.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|254670653|emb|CBA06706.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha153] gi|254672637|emb|CBA06420.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha275] gi|261392815|emb|CAX50396.1| putative type II restriction-modification system enzyme Mod [Neisseria meningitidis 8013] gi|304338130|gb|EFM04266.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|319410190|emb|CBY90526.1| putative type II restriction-modification system enzyme Mod [Neisseria meningitidis WUE 2594] gi|325134031|gb|EGC56686.1| DNA-cytosine methyltransferase [Neisseria meningitidis M13399] gi|325203903|gb|ADY99356.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240355] Length = 411 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFP--NTLIFGDIA 57 +++ +F GIG + EQ F+ N+ F+ +I+PY K+Y N+ DI Sbjct: 38 IRLATVFSGIGAV----EQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDIT 93 Query: 58 KIKTQDIPDH-DVLLAGFPCQPFSQAG 83 + + + D+L+ G PCQ FS G Sbjct: 94 QFDARKFRNQVDILVGGSPCQAFSMVG 120 >gi|121634611|ref|YP_974856.1| putative modification methylase [Neisseria meningitidis FAM18] gi|4887086|gb|AAD32180.1|AF125564_2 putative site specific DNA methyltransferase [Neisseria meningitidis] gi|120866317|emb|CAM10058.1| putative modification methylase [Neisseria meningitidis FAM18] gi|325132026|gb|EGC54724.1| DNA-cytosine methyltransferase [Neisseria meningitidis M6190] gi|325135954|gb|EGC58564.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579] gi|325137780|gb|EGC60355.1| DNA-cytosine methyltransferase [Neisseria meningitidis ES14902] gi|325142075|gb|EGC64502.1| DNA-cytosine methyltransferase [Neisseria meningitidis 961-5945] gi|325198036|gb|ADY93492.1| DNA-cytosine methyltransferase [Neisseria meningitidis G2136] gi|325202381|gb|ADY97835.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149] gi|325207867|gb|ADZ03319.1| DNA-cytosine methyltransferase [Neisseria meningitidis NZ-05/33] Length = 411 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFP--NTLIFGDIA 57 +++ +F GIG + EQ F+ N+ F+ +I+PY K+Y N+ DI Sbjct: 38 IRLATVFSGIGAV----EQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDIT 93 Query: 58 KIKTQDIPDH-DVLLAGFPCQPFSQAG 83 + + + D+L+ G PCQ FS G Sbjct: 94 QFDARKFRNQVDILVGGSPCQAFSMVG 120 >gi|16125285|ref|NP_419849.1| C-5 cytosine-specific DNA methylase [Caulobacter crescentus CB15] gi|221234022|ref|YP_002516458.1| DNA-cytosine methyltransferase [Caulobacter crescentus NA1000] gi|13422327|gb|AAK23017.1| C-5 cytosine-specific DNA methylase [Caulobacter crescentus CB15] gi|220963194|gb|ACL94550.1| DNA-cytosine methyltransferase [Caulobacter crescentus NA1000] Length = 335 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 13/88 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--FGDIAKIKT 61 + LFCG GG L+Q F E + + SVK+Y N P+ + D+++I Sbjct: 3 LLSLFCGAGG----LDQGFEEAGFEVGLALDRKLDSVKSYNLNRPSAAVARVKDLSEITI 58 Query: 62 QDIPD-------HDVLLAGFPCQPFSQA 82 QDI D ++ G PCQ FSQA Sbjct: 59 QDIDDLYGKEFSPSGVIGGPPCQSFSQA 86 >gi|307704025|ref|ZP_07640957.1| cytosine methyl transferase [Streptococcus mitis SK597] gi|307622416|gb|EFO01421.1| cytosine methyl transferase [Streptococcus mitis SK597] Length = 351 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 11/86 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLFCGIGG+ ++Q + +I+ S Y+ N IF D+ +I+ Sbjct: 3 INAVDLFCGIGGLTYGIQQA----GINVVAGYDIDEKSKFAYEYNNGAKFIFKDVREIED 58 Query: 62 QDI-----PDHD--VLLAGFPCQPFS 80 +I PD D VL+ PCQPFS Sbjct: 59 NEILGLYPPDTDIKVLIGCAPCQPFS 84 >gi|293371778|ref|ZP_06618188.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f] gi|292633230|gb|EFF51801.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f] Length = 337 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L F+ + ++E + T++ANF +T LI GDI I Sbjct: 1 MNLISLFSGAGGLDL----GFHKAGFKVVTANEFDAKICPTFRANFSDTNLIEGDIRDIP 56 Query: 61 TQDIPDHDV-LLAGFPCQPFSQAG 83 + + PD+ ++ G PCQ +S+AG Sbjct: 57 SSEFPDNIAGIIGGPPCQSWSEAG 80 >gi|293365989|ref|ZP_06612691.1| modification methylase Sau3AI [Streptococcus oralis ATCC 35037] gi|307702387|ref|ZP_07639344.1| DNA-cytosine methyltransferase [Streptococcus oralis ATCC 35037] gi|291315532|gb|EFE55983.1| modification methylase Sau3AI [Streptococcus oralis ATCC 35037] gi|307624064|gb|EFO03044.1| DNA-cytosine methyltransferase [Streptococcus oralis ATCC 35037] Length = 421 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 15/92 (16%) Query: 2 LKITDLFCGIGGIRLDLE----QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA 57 +K+ +LF G+GG R+ LE Q F + + S + + + Y +FPN+ + Sbjct: 1 MKVLELFAGVGGFRIGLENADKQLFKTKWANQWEPSRKSQDAFEVYDYHFPNS----ENI 56 Query: 58 KIKTQDIPDH-------DVLLAGFPCQPFSQA 82 I DI D D+++ GFPCQ +S A Sbjct: 57 NISISDITDEQFSKMDADMIVGGFPCQDYSVA 88 >gi|239918514|ref|YP_002958072.1| DNA-methyltransferase Dcm [Micrococcus luteus NCTC 2665] gi|281415284|ref|ZP_06247026.1| DNA-methyltransferase Dcm [Micrococcus luteus NCTC 2665] gi|239839721|gb|ACS31518.1| DNA-methyltransferase Dcm [Micrococcus luteus NCTC 2665] Length = 315 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ F GIGG L E + + EI + + + ++P +I + Sbjct: 13 LRMASFFTGIGGFDLGFENA----GIRTVYQCEIKDFCNQVLEYHWPEIPRGTNIELVNP 68 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 DIP+ D+ GFPCQ S A Sbjct: 69 DDIPEADIWTGGFPCQDISLA 89 >gi|321312120|ref|YP_004204407.1| cytosine-specific methyltransferase [Bacillus subtilis BSn5] gi|320018394|gb|ADV93380.1| cytosine-specific methyltransferase [Bacillus subtilis BSn5] Length = 380 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI- 59 K LF G GG+ + F V+ +++EI+ + TY+ N P+T L GDI+++ Sbjct: 5 FKAISLFSGAGGMDIG----FQKAGVDVVWANEIDKDACNTYELNNPDTYLRRGDISEVY 60 Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83 + ++ D+L G PCQ FS AG Sbjct: 61 EELKNYNGIDLLFGGPPCQGFSVAG 85 >gi|119493084|ref|ZP_01624009.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106] gi|119452829|gb|EAW34004.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106] Length = 441 Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 19/91 (20%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAK----- 58 DLF G GG+ L EQ + + EI+P +Q NFP +F DI+K Sbjct: 17 VDLFAGSGGMTLGFEQA----GFDVLAAVEIDPIHCAVHQYNFPLWSVFCEDISKLSSDK 72 Query: 59 ------IKTQDIPDHDVLLAGFPCQPFSQAG 83 IK QDI DV+ G PCQ FS G Sbjct: 73 IRIYSSIKNQDI---DVVFGGPPCQGFSLMG 100 >gi|163938820|ref|YP_001643704.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis KBAB4] gi|163861017|gb|ABY42076.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis KBAB4] Length = 350 Score = 43.9 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 5/82 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 K+ +F GIGG L +Q E +++E++ + TY+ + L D+ ++ Sbjct: 6 KLGSMFAGIGGTCLGFQQA----GAEIVWANEVDRNASITYRHFWKGEYLQEADVTEVDK 61 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 I D+L+ GFPCQ FS AG Sbjct: 62 TTISQLDILIGGFPCQAFSIAG 83 >gi|284989342|ref|YP_003407896.1| DNA-cytosine methyltransferase [Geodermatophilus obscurus DSM 43160] gi|284062587|gb|ADB73525.1| DNA-cytosine methyltransferase [Geodermatophilus obscurus DSM 43160] Length = 671 Score = 43.9 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 11/85 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK----- 60 DLF G GG+ L LEQ FS++ +P +V+T+ +F + D+A Sbjct: 52 DLFSGAGGMSLGLEQA----GFRVVFSADHDPEAVETHAHHFGGMSVDWDLADADAVERV 107 Query: 61 --TQDIPDHDVLLAGFPCQPFSQAG 83 T ++L G PCQPFS+AG Sbjct: 108 AATLRAVGVELLAGGPPCQPFSKAG 132 >gi|322499679|emb|CBZ34753.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 840 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 6/46 (13%) Query: 44 QANFPNT------LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + FP+ + GDI +I + P HDVL GFPCQ F++AG Sbjct: 415 EGGFPDATARSVPFLVGDITEIPSAFFPTHDVLTGGFPCQSFAKAG 460 >gi|325678040|ref|ZP_08157677.1| putative modification methylase BspRI [Ruminococcus albus 8] gi|324110257|gb|EGC04436.1| putative modification methylase BspRI [Ruminococcus albus 8] Length = 358 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 + + DLFCG GG + F + +I ++ TY NFPN + I DI+ +K Sbjct: 1 MNVFDLFCGCGG----FSKGFQSAGFDIKLGIDIWQDAITTYNHNFPNAVTITEDISNLK 56 Query: 61 TQDIPDH--------DVLLAGFPCQPFSQAG 83 +D+ DV++ G PCQ FS +G Sbjct: 57 GEDLLSRANLTADEVDVIIGGPPCQGFSLSG 87 >gi|146088814|ref|XP_001466154.1| modification methylase-like protein [Leishmania infantum JPCM5] gi|134070256|emb|CAM68593.1| modification methylase-like protein [Leishmania infantum JPCM5] Length = 840 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 6/46 (13%) Query: 44 QANFPNT------LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + FP+ + GDI +I + P HDVL GFPCQ F++AG Sbjct: 415 EGGFPDATARSVPFLVGDITEIPSAFFPTHDVLTGGFPCQSFAKAG 460 >gi|157870650|ref|XP_001683875.1| modification methylase-like protein [Leishmania major] gi|68126942|emb|CAJ05189.1| modification methylase-like protein [Leishmania major strain Friedlin] Length = 840 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 6/46 (13%) Query: 44 QANFPNT------LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + FP+ + GDI +I + P HDVL GFPCQ F++AG Sbjct: 415 EGGFPDATARSVPFLVGDITEIPSAFFPTHDVLTGGFPCQSFAKAG 460 >gi|126465817|ref|YP_001040926.1| DNA-cytosine methyltransferase [Staphylothermus marinus F1] gi|126014640|gb|ABN70018.1| DNA-cytosine methyltransferase [Staphylothermus marinus F1] Length = 323 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 10/87 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61 K DLFCG GG T R+V P + +TY+ NFP+++ I DI +I+ Sbjct: 6 KFIDLFCGAGGFAEGFILTNRFRSV--LGIDNFRP-AAQTYKINFPDSIVIMEDIKRIRN 62 Query: 62 QDI-----PDH-DVLLAGFPCQPFSQA 82 D+ P+ DV++ PC+PF+ A Sbjct: 63 DDLIEIIDPEEIDVVIGSPPCEPFTGA 89 >gi|206972340|ref|ZP_03233286.1| C-5 cytosine-specific DNA methylase [Bacillus cereus AH1134] gi|206732665|gb|EDZ49841.1| C-5 cytosine-specific DNA methylase [Bacillus cereus AH1134] Length = 503 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+I LF G G L F + + F+ E + +VKTY+ N ++ DI Sbjct: 182 LQIVSLFSGSGVFDLG----FKNEGFDIIFAIEKDEDAVKTYRHNLGEHVVCHDITTYPK 237 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 +DIP+ +++ G PCQ FS + Sbjct: 238 KDIPNAPIIIGGPPCQGFSNS 258 >gi|89097277|ref|ZP_01170167.1| hypothetical protein B14911_16900 [Bacillus sp. NRRL B-14911] gi|89088100|gb|EAR67211.1| hypothetical protein B14911_16900 [Bacillus sp. NRRL B-14911] Length = 416 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-----SVKTYQANFPNTL-IFGD 55 L + +LF G+GG R+ LE+ + + ++++ P + Y ++FP+++ D Sbjct: 5 LNVVELFAGVGGFRVGLERA-DKNFFDTVWANQWEPSKKAQDAFNCYNSHFPSSVNCNDD 63 Query: 56 IAKIKTQDIPDH--DVLLAGFPCQPFSQA 82 I K+ + D D+L+ GFPCQ +S A Sbjct: 64 IGKVSNKTFEDMNIDLLVGGFPCQDYSVA 92 >gi|221232587|ref|YP_002511741.1| DNA modification methylase [Streptococcus pneumoniae ATCC 700669] gi|220675049|emb|CAR69627.1| putative DNA modification methylase [Streptococcus pneumoniae ATCC 700669] Length = 421 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLE----QTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIF 53 +K+ +LF G+GG R+ LE Q F + + S + + + Y +FPN+ + Sbjct: 1 MKVLELFAGVGGFRIGLENADKQLFKTKWANQWEPSRKSQDAFEVYDYHFPNSKNINISI 60 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI + + D D+++ GFPCQ +S A Sbjct: 61 SDITDEQFSKM-DADMIVGGFPCQDYSVA 88 >gi|145356149|ref|XP_001422300.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582541|gb|ABP00617.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 778 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 4/79 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF GIGG+ L LE+ + + E + + + + +P+ + D+A + Sbjct: 3 LRVASLFSGIGGLDLGLERAGH----DVVLRVERDAHCRELLRRQYPDGALMDDVAAVMP 58 Query: 62 QDIPDHDVLLAGFPCQPFS 80 +D+ D+L AGFPC S Sbjct: 59 RDLDGVDLLAAGFPCNDCS 77 >gi|145346921|ref|XP_001417930.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578158|gb|ABO96223.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 820 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF G+GG+ L L+Q HR +E E + + + A FP + D+A++ Sbjct: 4 LRVASLFSGVGGLDLGLQQA-GHR-IELMV--ERDAHCKQVLSARFPGVALLNDVAEVLP 59 Query: 62 QDIPDHDVLLAGFPCQPFS 80 + + D ++AGFPC S Sbjct: 60 FMLENIDCVVAGFPCNDCS 78 >gi|50841408|gb|AAT84068.1| 5-cytosine DNA methyltransferase [Entamoeba invadens] Length = 324 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 3/83 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+I + F GIGG+R LE++ H N F + +IN + Y+ N+ ++ ++ + Sbjct: 9 LRILEFFSGIGGLRASLERSKVHTNT-TFCAIDINEIANTIYEGNYKEKVVVKNLDTVSV 67 Query: 62 QDIPDH--DVLLAGFPCQPFSQA 82 + I + +V PCQP++ + Sbjct: 68 EWIEEKRANVWFMSPPCQPYNNS 90 >gi|317127846|ref|YP_004094128.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] gi|315472794|gb|ADU29397.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] Length = 564 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAK 58 LK+ DLF G GG+ EQT + E + E N + KT++ N + F DI Sbjct: 4 LKVIDLFAGAGGLSAGFEQT---DSFEVIAAIENNKNARKTFRRNHKSLRKEFFFRDIKD 60 Query: 59 IKTQDIPDH-----DVLLAGFPCQPFSQA 82 +K + I + D+++ G PCQ FS A Sbjct: 61 LKYEQINELKKIGIDIVIGGPPCQGFSNA 89 >gi|254412384|ref|ZP_05026158.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196180694|gb|EDX75684.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 221 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 42/96 (43%), Gaps = 17/96 (17%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA-----NFPNTLIFGD 55 ML LF G GG+ + + Q E EI+PY KT ++ N LI D Sbjct: 1 MLSALSLFSGAGGMDIGVRQA----GFEILADIEIDPYCCKTIRSAMDRENLRTLLIEKD 56 Query: 56 IAKIKTQDI--------PDHDVLLAGFPCQPFSQAG 83 I ++ + D D+L G PCQ FSQAG Sbjct: 57 IKQVDPSHLIRELTIQPGDLDLLFGGSPCQSFSQAG 92 >gi|157825194|ref|YP_001492914.1| site-specific DNA methylase [Rickettsia akari str. Hartford] gi|157799152|gb|ABV74406.1| Site-specific DNA methylase [Rickettsia akari str. Hartford] Length = 93 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Query: 31 FSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80 FSS+I + Y+ N + L +G+I +I IP HD+L AGFP Q FS Sbjct: 3 FSSDIGKDVQEAYKRNLGDKL-YGNITEISAHKIPKHDILCAGFPYQSFS 51 >gi|156741374|ref|YP_001431503.1| DNA-cytosine methyltransferase [Roseiflexus castenholzii DSM 13941] gi|156232702|gb|ABU57485.1| DNA-cytosine methyltransferase [Roseiflexus castenholzii DSM 13941] Length = 387 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 8/85 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 L + F G G R+ L + C F+++I+P Y+ NF L+ DI ++ Sbjct: 4 LTFYEFFAGGGLARIGLGPQWT-----CLFANDIDPKKADVYRRNFSGAPELVVADIHRV 58 Query: 60 KTQDIPDHDVLL-AGFPCQPFSQAG 83 T +P +L A FPCQ S AG Sbjct: 59 TTDMLPGRALLAWASFPCQDLSLAG 83 >gi|313678719|ref|YP_004056459.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis PG45] gi|312950602|gb|ADR25197.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis PG45] Length = 324 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 10/86 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 I DLF G GG+ L F N + + E +V TY NF ++ DI + ++ Sbjct: 6 IIDLFAGAGGLTLG----FTQNNFDILDTIEFWQPAVDTYNFNFKKNVVAKDITDSEVRN 61 Query: 64 IPDH------DVLLAGFPCQPFSQAG 83 + D+++ GFPCQ FS AG Sbjct: 62 ELESNWKNKTDLVIGGFPCQGFSLAG 87 >gi|157953197|ref|YP_001498088.1| hypothetical protein AR158_C006R [Paramecium bursaria Chlorella virus AR158] gi|156067845|gb|ABU43552.1| hypothetical protein AR158_C006R [Paramecium bursaria Chlorella virus AR158] Length = 333 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 L+ LF G GG ++ ++ SE++ ++KT+ N P+ + GD++ I Sbjct: 4 LRAISLFAGAGGDTFGMKMA----GIDVVAFSELDIDAIKTHNRNNPDCVALGDVSLIDE 59 Query: 61 ---TQDIPDHDVLLAGFPCQPFSQAG 83 + + + D++ AGFPCQ FS AG Sbjct: 60 TMLSPFVDNVDIIFAGFPCQGFSNAG 85 >gi|86151502|ref|ZP_01069717.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni 260.94] gi|85841849|gb|EAQ59096.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni 260.94] Length = 187 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 11/90 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDI--AK 58 KI DLFCG GG EQ N + + + N ++++T++ N P++ +I GD+ A Sbjct: 3 FKILDLFCGAGGFSNGFEQNENFKTI---IGVDFNKFALETFKYNHPDSKVICGDLKDAL 59 Query: 59 IKTQDIPDH-----DVLLAGFPCQPFSQAG 83 +K+ I + ++++ G PCQ FS G Sbjct: 60 VKSYIIDEAQKNGINMIIGGPPCQGFSSKG 89 >gi|78047901|ref|YP_364076.1| putative cytosine-specific DNA methylase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036331|emb|CAJ24022.1| putative cytosine-specific DNA methylase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 333 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKI 59 M + F G G R L + +C +++ +P +Y AN+ + L GD+A + Sbjct: 1 MANFYEFFAGGGMARAGLGPDW-----QCLLANDFDPKKAASYAANWGTDHLRVGDVAAL 55 Query: 60 KTQDIP-DHDVLLAGFPCQPFSQAG 83 T D+P D+ A FPCQ S AG Sbjct: 56 TTADLPAGADLAWASFPCQDLSLAG 80 >gi|268680630|ref|YP_003305061.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM 6946] gi|268618661|gb|ACZ13026.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM 6946] Length = 398 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 45/113 (39%), Gaps = 31/113 (27%) Query: 2 LKITDLFCGIGGIRLDLEQTF---------------NHRNV--------ECFFSSEINPY 38 LK+ F G GG+ L LE F H+N + F+ +I P Sbjct: 4 LKVVSFFSGCGGLDLGLEGDFWVKAKSVKDKTWIKERHKNFVKLAPTAFQTVFACDIKPS 63 Query: 39 SVKTYQANFPNTLIFG--------DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + K ++ F +F AK T P+ DV+ GFPCQ FS AG Sbjct: 64 AKKAWEYYFQRDNVFHLESIVELVKKAKEGTFTFPNADVVTGGFPCQDFSVAG 116 >gi|314998281|ref|ZP_07863147.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133a01] gi|313587745|gb|EFR66590.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133a01] Length = 171 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 + DLF GIGG L +EQ + +C EI+ ++ ++Y+A + + DI + Sbjct: 1 MTFLDLFAGIGGFCLGMEQAGH----QCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSV 56 Query: 60 K---TQDIPDHDVLLAGFPCQPFSQAG 83 Q + D+L GFPCQ FS AG Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83 >gi|198430517|ref|XP_002128135.1| PREDICTED: similar to DNA methyltransferase 2 [Ciona intestinalis] Length = 343 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 LK+ +L+ GIGG+ L N +N E S +I+P + Y+ NFP T + I Sbjct: 5 LKVLELYSGIGGMHYALLGA-NLKNCEVVCSVDISPAASLVYKHNFPGTKHWERSIEGFS 63 Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83 +D + + L+ PCQPF++ G Sbjct: 64 AKDFDNMGFNTLMMSPPCQPFTRVG 88 >gi|309790027|ref|ZP_07684601.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6] gi|308227882|gb|EFO81536.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6] Length = 438 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 15/87 (17%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEIN--PYSVKTYQANFPNTLIFGDIAKIK--- 60 DLFCG GG+ L E F ++ I+ P +V T++ NF + I DI +I Sbjct: 61 DLFCGAGGMSLGFESG------NFFVAAGIDAEPAAVMTHKYNFLSKGIACDIREISDPR 114 Query: 61 ----TQDIPDHDVLLAGFPCQPFSQAG 83 T +P DV++ G PCQ F++ G Sbjct: 115 ELLATLGLPRVDVIIGGPPCQGFARIG 141 >gi|188588765|ref|YP_001921868.1| DNA-cytosine methyltransferase [Clostridium botulinum E3 str. Alaska E43] gi|188499046|gb|ACD52182.1| DNA-cytosine methyltransferase [Clostridium botulinum E3 str. Alaska E43] Length = 304 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DLFCG GG L ++ E + + ++K Y NF + + D+ I Sbjct: 1 MKVIDLFCGCGGFSLGMQNA----GFEIVAAYDNWEPAIKVYDENFNHPIYNIDLQNISL 56 Query: 62 QDIP-----DHDVLLAGFPCQPFSQAG 83 ++I + DV++ G PCQ +S AG Sbjct: 57 EEIESMKKLNPDVIIGGPPCQDYSSAG 83 >gi|161869767|ref|YP_001598934.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis 053442] gi|161595320|gb|ABX72980.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis 053442] Length = 411 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 17/91 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFP-------NTLI 52 +++ +F GIG + EQ F+ N+ F+ +I+PY K+Y N+ N + Sbjct: 38 IRLATVFSGIGAV----EQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDIT 93 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D +K + Q D+L+ G PCQ FS G Sbjct: 94 QFDASKFRNQV----DILVGGSPCQAFSMVG 120 >gi|239624756|ref|ZP_04667787.1| DNA-cytosine methyltransferase [Clostridiales bacterium 1_7_47_FAA] gi|239521142|gb|EEQ61008.1| DNA-cytosine methyltransferase [Clostridiales bacterium 1_7_47FAA] Length = 420 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 11/88 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + +LF G+GG RL L+ + E + S+ P K + A+ +GDI + QD Sbjct: 5 VCELFAGVGGFRLGLQHS--SPQWETVWFSQWEPGRKKQW-AHDCYVKHWGDIDERTGQD 61 Query: 64 I--------PDHDVLLAGFPCQPFSQAG 83 I PDH +L+ GFPCQ +S A Sbjct: 62 IASVDKTAIPDHTLLVGGFPCQNYSVAA 89 >gi|221120982|ref|XP_002166687.1| PREDICTED: similar to TRNA aspartic acid methyltransferase 1 [Hydra magnipapillata] Length = 388 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 LK+ + + GIGG+ L +VE F EIN + Y+ NFP TL+ +I + Sbjct: 5 LKVLEFYSGIGGVHYALTYAGVSVHVEAAF--EINTSANSVYRHNFPQTTLLQKNIEGLN 62 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 +D+ + DV PCQP+++ G Sbjct: 63 LEDLEHFNADVWTMSPPCQPYTRLG 87 >gi|218767941|ref|YP_002342453.1| putative modification methylase [Neisseria meningitidis Z2491] gi|6900408|emb|CAB72018.1| putative cytosine-specific methyltransferase [Neisseria meningitidis] gi|121051949|emb|CAM08255.1| putative modification methylase [Neisseria meningitidis Z2491] Length = 411 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 17/91 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFP-------NTLI 52 +++ +F GIG + EQ F+ N+ F+ +I+PY K+Y N+ N + Sbjct: 38 IRLATVFSGIGAV----EQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDIT 93 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D +K + Q D+L+ G PCQ FS G Sbjct: 94 QFDASKFRNQV----DILVGGSPCQAFSMVG 120 >gi|314994131|ref|ZP_07859441.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133B] gi|313591449|gb|EFR70294.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133B] Length = 130 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 + DLF GIGG L +EQ + +C EI+ ++ ++Y+A + + DI + Sbjct: 1 MTFLDLFAGIGGFCLGMEQAGH----QCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSV 56 Query: 60 K---TQDIPDHDVLLAGFPCQPFSQAG 83 Q + D+L GFPCQ FS AG Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83 >gi|86747598|ref|YP_484094.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2] gi|86570626|gb|ABD05183.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2] Length = 390 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF GIGG+ L L + + E SEI + + F GD+A + + Sbjct: 1 MKIAGLFAGIGGLELGLHRAGH----ETVILSEIWQPAGAVLEHRFKGAPNVGDVATLTS 56 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 +P +++ AGFPCQ SQAG Sbjct: 57 --LPSEVELMTAGFPCQDLSQAG 77 >gi|323487868|ref|ZP_08093126.1| type II modification methyltransferase [Planococcus donghaensis MPA1U2] gi|323398602|gb|EGA91390.1| type II modification methyltransferase [Planococcus donghaensis MPA1U2] Length = 420 Score = 43.5 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-----SVKTYQANFPNTLIFG-- 54 L++ +LF G+GG RL L++ NH + + ++ P + Y NF +T I Sbjct: 7 LRVIELFAGVGGFRLGLQKA-NHELFDIVWGNQWEPSRKAQDAFDCYSRNF-DTGIHSNE 64 Query: 55 DIAKIKTQDIPD--HDVLLAGFPCQPFSQA 82 DI K+ D D+L+ GFPCQ +S A Sbjct: 65 DITKVSDDTFHDLRADLLVGGFPCQDYSVA 94 >gi|53728781|ref|ZP_00135132.2| COG0270: Site-specific DNA methylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 354 Score = 43.5 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGD----IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 SEI P+ ++P+ GD + KI ++IP DVL+ G PCQ FS AG Sbjct: 28 SEIEPFPCAVLAYHYPDIPNLGDMTALVPKILNREIPAPDVLVGGTPCQAFSVAG 82 >gi|314940406|ref|ZP_07847565.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133a04] gi|313640387|gb|EFS04967.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133a04] Length = 130 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 + DLF GIGG L +EQ + +C EI+ ++ ++Y+A + + DI + Sbjct: 1 MTFLDLFAGIGGFCLGMEQAGH----QCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSV 56 Query: 60 K---TQDIPDHDVLLAGFPCQPFSQAG 83 Q + D+L GFPCQ FS AG Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83 >gi|317132209|ref|YP_004091523.1| DNA-cytosine methyltransferase [Ethanoligenens harbinense YUAN-3] gi|315470188|gb|ADU26792.1| DNA-cytosine methyltransferase [Ethanoligenens harbinense YUAN-3] Length = 438 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 9/80 (11%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAKIKT 61 DLFCG GG+ + LEQ R V + + + +V TY+ N P ++I DI +I Sbjct: 64 DLFCGAGGLSVGLEQE-GFRPVA---AVDKDQSAVLTYRFNRPWLTDGSIIHEDIREIVN 119 Query: 62 QDI-PDHDVLLAGFPCQPFS 80 QDI P V++ G PCQ FS Sbjct: 120 QDIFPHVPVVVGGPPCQGFS 139 >gi|213581465|ref|ZP_03363291.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 295 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/20 (85%), Positives = 18/20 (90%) Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P HDVLLAGFPCQPFS AG Sbjct: 1 MPQHDVLLAGFPCQPFSLAG 20 >gi|157953886|ref|YP_001498777.1| hypothetical protein AR158_C696R [Paramecium bursaria Chlorella virus AR158] gi|156068534|gb|ABU44241.1| hypothetical protein AR158_C696R [Paramecium bursaria Chlorella virus AR158] Length = 362 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK +LF GI GI L VE EIN + + FP+ +F D+ K Sbjct: 3 LKALELFAGIAGITHGLRGF-----VEPMAFVEINKDAQEFLSTKFPDKPVFDDVTKFSK 57 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 +D + D++ GFPC FS AG Sbjct: 58 RDFDEPIDMITGGFPCTGFSIAG 80 >gi|291618717|ref|YP_003521459.1| HsdRM [Pantoea ananatis LMG 20103] gi|291153747|gb|ADD78331.1| HsdRM [Pantoea ananatis LMG 20103] Length = 313 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 9/85 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAK 58 M + LF G GG + FN +++I PY+ Y AN P T + G + Sbjct: 1 MPTVVSLFSGCGGSDAGVVNAGFN-----VLMANDILPYARDVYLANHPETDYVLGSVDN 55 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 IK P D+L+ +PCQ FSQ G Sbjct: 56 IK--HFPKADLLVGCYPCQGFSQGG 78 >gi|288559285|ref|YP_003422771.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1] gi|288541995|gb|ADC45879.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1] Length = 342 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 9/85 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK-- 60 + DLFCGIGG + F + F +I +++T+Q N NT I D+ ++ Sbjct: 6 VIDLFCGIGG----FSKGFEMAGFDVLFGIDIWDIAIETFQHNHKNTEGILADLTELDDD 61 Query: 61 --TQDIPDHDVLLAGFPCQPFSQAG 83 Q DV++AG PCQ FS G Sbjct: 62 FFKQYTNKVDVIIAGPPCQGFSMCG 86 >gi|256078707|ref|XP_002575636.1| DNA (cytosine-5)-methyltransferase [Schistosoma mansoni] gi|238660878|emb|CAZ31869.1| DNA (cytosine-5)-methyltransferase, putative [Schistosoma mansoni] Length = 368 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 7/86 (8%) Query: 2 LKITDLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +++ +L+ GIGG+ + E T H E + EIN + Y+ NFPNTL + + Sbjct: 1 MRVLELYSGIGGMHIAFKESTVKH---EVVAAVEINGVATDVYKYNFPNTLTLNRVIESF 57 Query: 61 TQDIP---DHDVLLAGFPCQPFSQAG 83 + D + +V PCQPF++ G Sbjct: 58 SPDYVCSLNANVWSLCPPCQPFTRLG 83 >gi|323350984|ref|ZP_08086641.1| modification methylase HgiDII [Streptococcus sanguinis VMC66] gi|322122708|gb|EFX94417.1| modification methylase HgiDII [Streptococcus sanguinis VMC66] Length = 352 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 11/82 (13%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLFCG+GG+ +++T + +I+ S Y+ N T I D+ +I ++I Sbjct: 7 DLFCGVGGLTYGIQKT----GINVIAGYDIDEKSKFAYEYNNDATFILKDVKEIDDREIS 62 Query: 66 -------DHDVLLAGFPCQPFS 80 D VL+ PCQPFS Sbjct: 63 NLYPKDTDIKVLIGCAPCQPFS 84 >gi|308389149|gb|ADO31469.1| Cytosine-specific methyltransferase NlaX [Neisseria meningitidis alpha710] Length = 275 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF GIGG L EQ + + EI+ + FP+ F D+ + D Sbjct: 6 VGSLFAGIGGFDLGFEQA----GFQTAWQVEIDEVNRAVLADRFPHARQFADV-RTALPD 60 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 + DV++ GFPCQ S AG Sbjct: 61 LWSVDVIVGGFPCQDVSTAG 80 >gi|260583507|ref|ZP_05851255.1| modification methylase HphIA [Granulicatella elegans ATCC 700633] gi|260158133|gb|EEW93201.1| modification methylase HphIA [Granulicatella elegans ATCC 700633] Length = 103 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 9/86 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 ++ DLF G+GG L + F E ++E++ Y+ N P +I DI+K+ Sbjct: 4 QVIDLFFGVGG----LSKEFFDSGFEIVLANEVDYSIANFYKKNHPKVKMINEDISKLDI 59 Query: 62 QDIPDH----DVLLAGFPCQPFSQAG 83 D+ + DV++ G PCQ FSQ G Sbjct: 60 DDVFNEYKNIDVIVWGPPCQGFSQKG 85 >gi|238917713|ref|YP_002931230.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC 27750] gi|238873073|gb|ACR72783.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC 27750] Length = 477 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 19/93 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSS---EINPYSVKTYQANFPNT----LIFG 54 LK+ DLFCG GG+ L Q E F +S +I V TY N P T ++ G Sbjct: 102 LKMLDLFCGAGGLSLGFTQ-------EGFVTSLANDIQDCCVDTYAHNHPETPRDHIVLG 154 Query: 55 DIAK-IKTQDI----PDHDVLLAGFPCQPFSQA 82 DI +K D + D+++ G PCQ FS A Sbjct: 155 DIKDVVKNLDELLAGRNVDIVVGGPPCQGFSMA 187 >gi|127485|sp|P16668|MTS3_STAAU RecName: Full=Modification methylase Sau3AI; Short=M.Sau3AI; AltName: Full=Cytosine-specific methyltransferase Sau3AI gi|153100|gb|AAA26673.1| Sau3AIM protein [Staphylococcus aureus] Length = 412 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-D 55 +K+ +LF G+GG RL LE T N + ++++ P ++ Y F N + D Sbjct: 4 IKVVELFAGVGGFRLGLENTKNGI-FDITWANQWEPSRKIQHAFDCYSKRFKNGIHSNKD 62 Query: 56 IAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 IA++ +++ + D+++ GFPCQ +S A Sbjct: 63 IAQVSDEEMANTEADMIVGGFPCQDYSVA 91 >gi|258406639|ref|YP_003199380.1| transcriptional regulator, XRE family [Desulfohalobium retbaense DSM 5692] gi|257798866|gb|ACV69802.1| transcriptional regulator, XRE family [Desulfohalobium retbaense DSM 5692] Length = 468 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 L LF G GG L NV F E++P K Y+ NFPN+ + GDI +I+ Sbjct: 117 LNAISLFSGCGGFSLGFSAA--GFNVRGFL--ELDPGLRKIYRLNFPNSFEMGGDITQIQ 172 Query: 61 TQDIPDH-------DVLLAGFPCQPFSQAG 83 I ++ DV++ G PCQ FS +G Sbjct: 173 DAKIKNYKSLIGDIDVIIGGPPCQGFSLSG 202 >gi|303237411|ref|ZP_07323977.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] gi|302482361|gb|EFL45390.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] Length = 383 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 +LF G GG+ L E+ F+H +E+N + +T ++N PN ++ DI + Sbjct: 48 ELFAGAGGLALGFEKAGFHH-----VMLNELNREACETLRSNRPNWNVLEADIHNVDFSK 102 Query: 64 IPDH-DVLLAGFPCQPFSQAG 83 + D+L GFPCQ FS AG Sbjct: 103 WHNQIDLLTGGFPCQAFSYAG 123 >gi|308229532|gb|ADO24181.1| M.ApaI [Acetobacter pasteurianus subsp. pasteurianus] Length = 349 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +K DLF G GG+ L ++ H +E E N +V TY A+ P+ + DI I Sbjct: 1 MKALDLFSGPGGLSLGMK----HAGIEPVACVEKNKDAVSTYDAHTPDAEHYCSDIRSIS 56 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 + D++ G PCQPFS G Sbjct: 57 FERYRGLVDIVFGGPPCQPFSTGG 80 >gi|218245850|ref|YP_002371221.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|257058898|ref|YP_003136786.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|218166328|gb|ACK65065.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|256589064|gb|ACU99950.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 418 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 32/87 (36%), Positives = 41/87 (47%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 DLF G GG+ L EQ + S EI+P + NFP ++I DI I Q+I Sbjct: 10 DLFAGAGGMTLGFEQA----GFDVLASVEIDPIHCLVHHYNFPFWSIICRDIQTITGQEI 65 Query: 65 P------DH--DVLLAGFPCQPFSQAG 83 +H DV+ G PCQ FS G Sbjct: 66 RQLSKVGNHPIDVVFGGPPCQGFSLMG 92 >gi|167746050|ref|ZP_02418177.1| hypothetical protein ANACAC_00745 [Anaerostipes caccae DSM 14662] gi|167654565|gb|EDR98694.1| hypothetical protein ANACAC_00745 [Anaerostipes caccae DSM 14662] Length = 615 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L + + ++SEI P+ ++ P +GDI+K+ Sbjct: 6 LTLGSLFDGSGGFPLGGLIS----GITPLWASEIEPFPIRVTTKRLPQVKHYGDISKMNG 61 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+ D++ G PCQ S AG Sbjct: 62 ADLKPVDIITFGSPCQDMSIAG 83 >gi|3746579|gb|AAC64006.1| cytosine methyltransferase [Paramecium bursaria Chlorella virus NYs1] Length = 362 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK +LF GI GI L VE EIN + + FP+ +F D+ K Sbjct: 3 LKALELFAGIAGITHGLRGF-----VEPVAFVEINKDAQEFLSTKFPDKPVFDDVTKFSK 57 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 +D + D++ GFPC FS AG Sbjct: 58 RDFDEPIDMITGGFPCTGFSIAG 80 >gi|213618692|ref|ZP_03372518.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 151 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 4/45 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF 47 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ Sbjct: 92 RFIDLFAGIGGIRRGFEAI----GGQCVFTSEWNKHAVRTYKANY 132 >gi|29566860|ref|NP_818425.1| gp127 [Mycobacterium phage Omega] gi|29425585|gb|AAN12767.1| gp127 [Mycobacterium phage Omega] Length = 247 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L DLF GIGG L L++ + + EI+ + ++P+ + F DI + Sbjct: 3 LTHVDLFAGIGGFSLTLQRA----GAKTVANVEIDKNCRQILARHYPDAVQFDDIKNVSG 58 Query: 62 QD------IPDHDVLLAGFPCQPFS 80 D +P+ +L GFPCQ S Sbjct: 59 DDLRSVGFVPERGILTGGFPCQDIS 83 >gi|314942783|ref|ZP_07849602.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133C] gi|314953681|ref|ZP_07856564.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133A] gi|313594323|gb|EFR73168.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133A] gi|313598474|gb|EFR77319.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133C] Length = 380 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 9/83 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKIK--- 60 DLF GIGG L +EQ + +C EI+ ++ ++Y+A + + DI + Sbjct: 5 DLFAGIGGFCLGMEQAGH----QCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSVSDEF 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 Q + D+L GFPCQ FS AG Sbjct: 61 IQSLGPVDILCGGFPCQAFSIAG 83 >gi|229066883|ref|ZP_04201078.1| Prophage LambdaBa01, C-5 cytosine-specific DNA methylase [Bacillus cereus AH603] gi|228715383|gb|EEL67217.1| Prophage LambdaBa01, C-5 cytosine-specific DNA methylase [Bacillus cereus AH603] Length = 251 Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DL GI GI + + +E EI ++ K + N+PN IF D+ K+ Sbjct: 1 MKMLDLCSGIAGISMAADWA----GIETAAFCEIEEFNQKVLRKNYPNIPIFPDLYKLAK 56 Query: 62 Q-------DIPDHDVLLAGFPCQPFSQAG 83 Q D+ V+ AG+PCQ S G Sbjct: 57 QSLIDGGVDVDSIGVISAGYPCQGESLVG 85 >gi|167648711|ref|YP_001686374.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] gi|167351141|gb|ABZ73876.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] Length = 375 Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 9/82 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF---GDIAKIKTQ 62 + F G G RL L + + C F+++ +P TY+ N + GD+ KI Sbjct: 11 EFFAGGGMARLGLGEAWT-----CAFANDFDPVKAATYRDNHKDAATHFHEGDVWKIAAA 65 Query: 63 DIPDH-DVLLAGFPCQPFSQAG 83 D+P D+ A PCQ FS AG Sbjct: 66 DLPGQADLAWASSPCQDFSLAG 87 >gi|157953073|ref|YP_001497965.1| hypothetical protein NY2A_B769R [Paramecium bursaria Chlorella virus NY2A] gi|155123300|gb|ABT15168.1| hypothetical protein NY2A_B769R [Paramecium bursaria Chlorella virus NY2A] Length = 362 Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK +LF GI GI L VE EIN + + FP+ +F D+ K Sbjct: 3 LKALELFAGIAGITHGLRGF-----VEPVAFVEINKDAQEFLSTKFPDKPVFDDVTKFSK 57 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 +D + D++ GFPC FS AG Sbjct: 58 RDFDEPIDMITGGFPCTGFSIAG 80 >gi|69244913|ref|ZP_00603103.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium DO] gi|257883136|ref|ZP_05662789.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,502] gi|257891884|ref|ZP_05671537.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,410] gi|258616872|ref|ZP_05714642.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium DO] gi|289567034|ref|ZP_06447433.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium D344SRF] gi|293563825|ref|ZP_06678258.1| methyl transferase [Enterococcus faecium E1162] gi|294619669|ref|ZP_06699086.1| methyl transferase [Enterococcus faecium E1679] gi|68196079|gb|EAN10510.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium DO] gi|257818794|gb|EEV46122.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,502] gi|257828244|gb|EEV54870.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,410] gi|289161170|gb|EFD09071.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium D344SRF] gi|291594089|gb|EFF25546.1| methyl transferase [Enterococcus faecium E1679] gi|291604195|gb|EFF33696.1| methyl transferase [Enterococcus faecium E1162] Length = 380 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 9/83 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKIK--- 60 DLF GIGG L +EQ + +C EI+ ++ ++Y+A + + DI + Sbjct: 5 DLFAGIGGFCLGMEQAGH----QCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSVSDEF 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 Q + D+L GFPCQ FS AG Sbjct: 61 IQSLGPVDILCGGFPCQAFSIAG 83 >gi|157691352|ref|YP_001485814.1| DNA (cytosine-5-)-methyltransferase [Bacillus pumilus SAFR-032] gi|157680110|gb|ABV61254.1| possible DNA (cytosine-5-)-methyltransferase [Bacillus pumilus SAFR-032] Length = 261 Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 +LF GIGGI L E +E E N + K NFP +F D+ K+ + + Sbjct: 14 ELFAGIGGIALAAEMA----GIEVMVFCEQNDFCRKVLNKNFPGVPVFNDVKKLNRELLE 69 Query: 66 DH---------DVLLAGFPCQPFSQAG 83 + D++ G+PCQ S G Sbjct: 70 EEGLINRNESIDIISGGYPCQGESVIG 96 >gi|229056682|ref|ZP_04196086.1| Site-specific DNA-methyltransferase [Bacillus cereus AH603] gi|228720618|gb|EEL72179.1| Site-specific DNA-methyltransferase [Bacillus cereus AH603] Length = 602 Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 40/96 (41%), Gaps = 19/96 (19%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLIF 53 KI DLF G GG+ EQT E + EIN +V+TY N P Sbjct: 24 KIIDLFAGAGGLSNGFEQT---GKFEIVGAVEINKEAVETYICNHQNNKEIIIKPKNSEI 80 Query: 54 GDIAKIKTQDI-------PDHDVLLAGFPCQPFSQA 82 DI+ I Q P V++ G PCQ FS A Sbjct: 81 SDISSINFQKFMMQKGIDPSETVVIGGPPCQGFSNA 116 >gi|319757808|gb|ADV69750.1| hypothetical protein SSUJS14_0659 [Streptococcus suis JS14] Length = 424 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 L D F G+GG R LE +C E + ++ K+Y+A + DI I Sbjct: 3 LSFLDFFAGVGGFRRGLELA----GFKCIGYCEKDKFARKSYEAMYDTKGEWFHDDITSI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +P D+ AG PCQ S AG Sbjct: 59 DPTQLPKADLWTAGSPCQNVSIAG 82 >gi|209528195|ref|ZP_03276665.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209491380|gb|EDZ91765.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 315 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 38/85 (44%), Gaps = 11/85 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDI 64 DLF G GGI Q F S EINP + T+Q NFPN F GD+ Sbjct: 63 DLFSGAGGI----TQGFWQAGFNPVASVEINPIASATHQRNFPNCHHFCGDVNDFNPHQW 118 Query: 65 ------PDHDVLLAGFPCQPFSQAG 83 P +++ G PCQ FS AG Sbjct: 119 LSKIGSPSVHLVVGGPPCQGFSVAG 143 >gi|328766176|gb|EGF76234.1| hypothetical protein BATDEDRAFT_28720 [Batrachochytrium dendrobatidis JAM81] Length = 373 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 27/107 (25%) Query: 2 LKITDLFCGIGGIRLDLE------QTFNHRNVECF------------------FSSEINP 37 L + LF G GG+ L LE + +E F +S+++ Sbjct: 14 LTVLGLFSGCGGLDLGLELAGLAAAIGEEKALEAFKNKEKFDAIRGESIFHTIYSNDLFK 73 Query: 38 YSVKTYQANFPNTLIFG-DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + ++Y+ NFP+T DI KIK + P+ D++L GFPC FS+AG Sbjct: 74 EANESYKLNFPSTFQHELDIRKIK--EFPNADLVLGGFPCPGFSEAG 118 >gi|322492416|emb|CBZ27690.1| modification methylase-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 847 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 6/46 (13%) Query: 44 QANFPNT------LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + FP+ + GDI +I + P HDVL GFPCQ F++AG Sbjct: 422 EGGFPDATACSVPFLVGDITEIPSAFFPMHDVLTGGFPCQSFAKAG 467 >gi|299469435|emb|CBH51836.1| putative DNA (cytosine-5-)-methyltransferase [Campylobacter fetus subsp. fetus] Length = 105 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 19/101 (18%) Query: 2 LKITDLFCGIGGIRLDLEQ------------TFNHRNVECFFSS----EINPYSVKTYQA 45 ++I DLF GIGG L E T + FF + EI+ K + Sbjct: 4 MQILDLFSGIGGFSLGFESANFKDYDFLKLPTKQESVNDGFFKTTAFCEIDTNCHKVLKK 63 Query: 46 NFPNTLIFGDIAKIKTQDIP---DHDVLLAGFPCQPFSQAG 83 ++ + +IF D+ KI D+ D++ GFPCQ S AG Sbjct: 64 HWASAIIFNDVTKITKDDLAPLGKIDIITGGFPCQDLSIAG 104 >gi|70725582|ref|YP_252496.1| hypothetical protein SH0581 [Staphylococcus haemolyticus JCSC1435] gi|68446306|dbj|BAE03890.1| shlA1M [Staphylococcus haemolyticus JCSC1435] Length = 412 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANF-PNTLIFGD 55 LK+ +LF G+GG RL LE T + + ++++ P ++ Y + F + D Sbjct: 4 LKVAELFAGVGGFRLGLENT-KEKIFDVTWANQWEPSKKIQHAFDCYNSRFITGEHVNKD 62 Query: 56 IAKIKTQDIPD--HDVLLAGFPCQPFSQA 82 IA I ++I + D+++ GFPCQ +S A Sbjct: 63 IALISDEEIANTKADMVVGGFPCQDYSVA 91 >gi|67924379|ref|ZP_00517809.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67853772|gb|EAM49101.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 435 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDI 64 DLF G+GG+ L EQ + S EI+P ++ NFP T I + IK +I Sbjct: 10 DLFAGVGGMTLGFEQA----GFDVLASVEIDPIHCSIHRYNFPFWTTICASVTSIKASEI 65 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 + DV+ G PCQ FS G Sbjct: 66 RELSTIKNKPIDVVFGGPPCQGFSLMG 92 >gi|260431846|ref|ZP_05785817.1| C-5 cytosine-specific DNA methylase [Silicibacter lacuscaerulensis ITI-1157] gi|260415674|gb|EEX08933.1| C-5 cytosine-specific DNA methylase [Silicibacter lacuscaerulensis ITI-1157] Length = 381 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 29 CFFSSEINPYSVKTYQANFPN--TLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 C F+++I+ +Y+AN L+ D+AK+ +IP D++ A FPCQ S AG Sbjct: 25 CLFANDIDAKKAASYRANHDGGRELLLKDVAKVTVDEIPGSADLVWASFPCQDLSLAG 82 >gi|76788592|ref|YP_329366.1| prophage LambdaSa04, methyltransferase C-5 [Streptococcus agalactiae A909] gi|76563649|gb|ABA46233.1| prophage LambdaSa04, methyltransferase, C-5 cytosine-specific family [Streptococcus agalactiae A909] Length = 417 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 L D F G+GG R LE + C E + ++ K+Y+A + DI I Sbjct: 3 LTFLDFFAGVGGFRRGLELA----GMTCLGYCEKDKFARKSYEAMYDTEGEWFHDDITSI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +P D+ AG PCQ S AG Sbjct: 59 DPTRLPKADLWTAGSPCQNLSIAG 82 >gi|297527509|ref|YP_003669533.1| DNA-cytosine methyltransferase [Staphylothermus hellenicus DSM 12710] gi|297256425|gb|ADI32634.1| DNA-cytosine methyltransferase [Staphylothermus hellenicus DSM 12710] Length = 323 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61 K DLFCG GG T R++ P + +TY+ NFP+++ + DI +I+ Sbjct: 6 KFIDLFCGAGGFAEGFILTNRFRSI--LGIDNFRP-AAQTYKINFPDSIVVMEDIKRIRN 62 Query: 62 QDI-----PDH-DVLLAGFPCQPFSQA 82 D+ P+ DV++ PC+PF+ A Sbjct: 63 DDLIEIVDPEEIDVVIGSPPCEPFTGA 89 >gi|261495470|ref|ZP_05991917.1| modification methylase Bsp6I-like protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308804|gb|EEY10060.1| modification methylase Bsp6I-like protein [Mannheimia haemolytica serotype A2 str. OVINE] Length = 157 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Query: 30 FFSSEINPYSVKTYQANFPNTLIFGDI----AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + SEI P+ FP+ GD+ KI ++IP DVL+ G PCQ FS AG Sbjct: 27 LWFSEIEPFPCAVLAHRFPDVPNLGDMIALPEKILNREIPAPDVLVGGTPCQAFSMAG 84 >gi|118577457|ref|YP_899696.1| DNA-cytosine methyltransferase [Pelobacter propionicus DSM 2379] gi|118504962|gb|ABL01443.1| DNA-cytosine methyltransferase [Pelobacter propionicus DSM 2379] Length = 313 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 7/90 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFN-------HRNVECFFSSEINPYSVKTYQANFPNTLIF 53 M+ + LF G GG+ L F+ + +++E+N + +TY+ N + + Sbjct: 7 MITVVSLFSGCGGMDLGFSGGFDFLGEHYAKTQFKIIWANELNGAACRTYRKNIGHHIKE 66 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GDI + + D+++ GFPCQ S G Sbjct: 67 GDIWQTMPEMPQSADLVIGGFPCQDISVNG 96 >gi|312889577|ref|ZP_07749127.1| C-5 cytosine-specific DNA methylase [Mucilaginibacter paludis DSM 18603] gi|311297925|gb|EFQ75044.1| C-5 cytosine-specific DNA methylase [Mucilaginibacter paludis DSM 18603] Length = 79 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML LF GIGG D+ T+ + FS E +P+ K + +P T + DI + Sbjct: 1 MLTHASLFSGIGG--FDMAATW--KGWYNIFSCEKDPFCRKILKFYWPQTEQYEDIHQFD 56 Query: 61 TQDIPDH-DVLLAGFPCQPFSQA 82 ++L GFPCQPFS A Sbjct: 57 ATPYRGSINILSGGFPCQPFSSA 79 >gi|220930206|ref|YP_002507115.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] gi|220000534|gb|ACL77135.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] Length = 719 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L +E ++SEI P+ ++ P +GDI K+ Sbjct: 4 LTLGSLFDGSGGFPLGGLLC----GIEPLWASEIEPFPIRVTTKRIPQMKHYGDINKLNG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++P D++ G PC S AG Sbjct: 60 AELPPVDIITFGSPCTDMSVAG 81 >gi|288926887|ref|ZP_06420787.1| modification methylase HindV (Cytosine-specific methyltransferase HindV) [Prevotella buccae D17] gi|288336326|gb|EFC74707.1| modification methylase HindV (Cytosine-specific methyltransferase HindV) [Prevotella buccae D17] Length = 313 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DLFCG GG+ L E+ + F + ++ V Y+ NF + I D+ +K Sbjct: 1 MKVVDLFCGCGGLSLGFEKA--GMEIVAAFDNWVDALYV--YRNNFSHPAIRADLMNVKA 56 Query: 62 QDIP----DHDVLLAGFPCQPFSQAG 83 D+++ G PCQ FS AG Sbjct: 57 SIEAIRPFKPDMIIGGPPCQDFSSAG 82 >gi|157691446|ref|YP_001485908.1| DNA (cytosine-5-)-methyltransferase [Bacillus pumilus SAFR-032] gi|157680204|gb|ABV61348.1| DNA (cytosine-5-)-methyltransferase [Bacillus pumilus SAFR-032] Length = 548 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 9/87 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ DLF G GG+ L QT E + EIN + +TY N + DI I + Sbjct: 5 KVLDLFAGAGGLSLGFSQT---GRFETVMAVEINENAAQTYTKNHKIEVNTQDIRSINFK 61 Query: 63 DIPDHDVL------LAGFPCQPFSQAG 83 D + +L + G PCQ FS A Sbjct: 62 DYKKYPILKEVSLVIGGPPCQGFSNAN 88 >gi|320101441|ref|YP_004177033.1| DNA-cytosine methyltransferase [Desulfurococcus mucosus DSM 2162] gi|319753793|gb|ADV65551.1| DNA-cytosine methyltransferase [Desulfurococcus mucosus DSM 2162] Length = 323 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 10/87 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K D+F G GG L + +++ S P + +TY+ANFP+TL+ + K T Sbjct: 6 KYIDVFSGAGGFSLGFHLSGRFKSLLAVDS--FKP-AAETYKANFPHTLVVNEDVKDLTG 62 Query: 63 DI------PDH-DVLLAGFPCQPFSQA 82 +I PD DV++ PC+PF+ A Sbjct: 63 EILTGLVKPDEVDVVIGSPPCEPFTGA 89 >gi|312133558|ref|YP_004000897.1| dcm2 [Bifidobacterium longum subsp. longum BBMN68] gi|311772809|gb|ADQ02297.1| Dcm2 [Bifidobacterium longum subsp. longum BBMN68] Length = 429 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 27/106 (25%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV------------------KTY 43 ++I +LF G+GG RL L+ + + F+ P+ + Y Sbjct: 5 IRIAELFAGVGGFRLGLDGY--GKKGDAFYMEPAGPFHTVWANQWEPTGQESKQFAWRCY 62 Query: 44 QANF-PNTLIFGDIAKI------KTQDIPDHDVLLAGFPCQPFSQA 82 + F + + DIAK+ T+ IP+ D+L+ GFPCQ +S A Sbjct: 63 EKRFGEGSCVNEDIAKVLDEVDAGTRTIPEFDMLVGGFPCQDYSVA 108 >gi|209525887|ref|ZP_03274422.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209493696|gb|EDZ94016.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 406 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 4/78 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ LF G GG+ L F+ + ++ + N + +T++ N + +I +I+ Sbjct: 17 KLISLFSGCGGMDL----PFHRAGFQVVWAIDCNEAACQTFRRNISENIACDNIQEIEIT 72 Query: 63 DIPDHDVLLAGFPCQPFS 80 +P D++ GFPCQ FS Sbjct: 73 KVPQADLITGGFPCQDFS 90 >gi|328772423|gb|EGF82461.1| hypothetical protein BATDEDRAFT_3612 [Batrachochytrium dendrobatidis JAM81] Length = 344 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ + F GIGG+ LE+ + V F ++N ++ YQ NF I + Sbjct: 4 LRVLEFFSGIGGLHYGLERAESTATVLASF--DVNEHANSCYQHNFGIKPSNKSIDTLTA 61 Query: 62 QDIPDHD--VLLAGFPCQPFSQAG 83 +DI +D L PCQPF+Q G Sbjct: 62 KDIEKYDSNCWLLSPPCQPFTQGG 85 >gi|313575370|emb|CBR26899.1| hypothetical protein [Streptococcus phage phi-SsUD.1] Length = 419 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 L D F G+GG R LE +C E + ++ K+Y+A + DI I Sbjct: 3 LTFLDFFAGVGGFRRGLELA----GFKCIGYCEKDKFARKSYEAMYDTKGEWFHDDITSI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +P D+ AG PCQ S AG Sbjct: 59 DPTQLPKADLWCAGSPCQNVSIAG 82 >gi|262113733|emb|CAR95400.1| hypothetical protein [Streptococcus phage phi-m46.1] Length = 417 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 L D F G+GG R LE +C E + ++ K+Y+A + DI I Sbjct: 3 LTFLDFFAGVGGFRRGLELA----GFKCIGYCEKDKFARKSYEAMYDTKGEWFHDDITSI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +P D+ AG PCQ S AG Sbjct: 59 DPTQLPKADLWCAGSPCQNVSIAG 82 >gi|294673126|ref|YP_003573742.1| C-5 cytosine-specific family DNA methylase [Prevotella ruminicola 23] gi|294473536|gb|ADE82925.1| DNA methylase, C-5 cytosine-specific family [Prevotella ruminicola 23] Length = 342 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 9/85 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 KI +F G+GGI + F+H + F+++ + +++AN+P+ ++ IA + Sbjct: 4 KIVSIFSGVGGI----DTGFSHAGFQTVFANDNWQNACDSFKANYPDAEVVCASIADVDF 59 Query: 62 QDIP----DHDVLLAGFPCQPFSQA 82 ++I D D L+ G PC PFS++ Sbjct: 60 KEIKKKYGDIDGLVGGPPCPPFSKS 84 >gi|257867242|ref|ZP_05646895.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC30] gi|257873577|ref|ZP_05653230.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC10] gi|257801298|gb|EEV30228.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC30] gi|257807741|gb|EEV36563.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC10] Length = 373 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 9/88 (10%) Query: 1 MLKITDL-----FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 M++IT+L F GIG L ++ + + ++SEI ++ + FP+ + GD Sbjct: 15 MIRITNLTLGSLFDGIGVFPLAAQK----QGITLSWASEIEKAPIRITKKQFPHMIHLGD 70 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + K+ IP D++ G PCQ S G Sbjct: 71 LTKLHGGKIPPVDIVTFGSPCQNLSTIG 98 >gi|4033740|gb|AAC97192.1| modification methylase M.NspHI [Nostoc sp. ATCC 29106] Length = 397 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 11/86 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAK----- 58 DLFCG GGI L Q + S E + + T+Q NFP+ F GDI + Sbjct: 63 VDLFCGAGGITQGLIQA----GFQALASVETSSIASATHQRNFPHCHHFCGDIEQFSPKI 118 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 +K P+ ++++ G PCQ FS AG Sbjct: 119 WLKQIGSPEVNLVVGGPPCQGFSVAG 144 >gi|42779474|ref|NP_976721.1| DNA-cytosine methyltransferase [Bacillus cereus ATCC 10987] gi|42735390|gb|AAS39329.1| DNA-cytosine methyltransferase [Bacillus cereus ATCC 10987] Length = 719 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L +E ++SEI P+ ++ P +GDI K+ Sbjct: 4 LTLGSLFDGSGGFPLGGLLC----GIEPLWASEIEPFPIRVTTKRIPQMKHYGDINKLNG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++P D++ G PC S AG Sbjct: 60 AELPPVDIITFGSPCTDMSVAG 81 >gi|157953001|ref|YP_001497893.1| hypothetical protein NY2A_B697R [Paramecium bursaria Chlorella virus NY2A] gi|155123228|gb|ABT15096.1| hypothetical protein NY2A_B697R [Paramecium bursaria Chlorella virus NY2A] Length = 369 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L+ DLF GIGGI L + VE E N + + P +F D+ Sbjct: 2 VLRALDLFSGIGGITHGLREI-----VEPIAFVEKNDEARSFLKKKHPEIPVFDDVCSFD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D++LAG+PC FS AG Sbjct: 57 ATKWTHVDIILAGWPCTGFSNAG 79 >gi|167644366|ref|YP_001682029.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] gi|167644566|ref|YP_001682229.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] gi|167346796|gb|ABZ69531.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] gi|167346996|gb|ABZ69731.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] Length = 440 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 10/84 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDI--AKIK 60 + DLF G GG L + F S+ +P ++ TY NFP I+GD+ ++K Sbjct: 10 VVDLFAGAGG----LSEGFRQAGFSIIAGSDNDPDALATYATNFPEARSIWGDVRTPEVK 65 Query: 61 TQDIP---DHDVLLAGFPCQPFSQ 81 Q + +++ G PCQ FSQ Sbjct: 66 AQILDAARSASIIVGGPPCQAFSQ 89 >gi|328768493|gb|EGF78539.1| hypothetical protein BATDEDRAFT_13083 [Batrachochytrium dendrobatidis JAM81] Length = 350 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ + F GIGG+ LE+ + V F ++N ++ YQ NF I + Sbjct: 5 LRVLEFFSGIGGLHYGLERAESTATVLASF--DVNEHANSCYQHNFGIKPSNKSIDTLTA 62 Query: 62 QDIPDHD--VLLAGFPCQPFSQAG 83 +DI +D L PCQPF+Q G Sbjct: 63 KDIEKYDSNCWLLSPPCQPFTQGG 86 >gi|293395454|ref|ZP_06639738.1| modification methylase HgiDII [Serratia odorifera DSM 4582] gi|291422138|gb|EFE95383.1| modification methylase HgiDII [Serratia odorifera DSM 4582] Length = 354 Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 13/85 (15%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDI 64 D FCG GG L Q + +++ + +TY+ANFP+ IF DI + + + Sbjct: 5 DFFCGCGGASEGLRQA----GFDVVLGIDVDQQASETYKANFPDADFIFDDIRNVTVERV 60 Query: 65 P--------DHDVLLAGFPCQPFSQ 81 D +L A PCQPFSQ Sbjct: 61 ANSIAFKSADGLLLSACAPCQPFSQ 85 >gi|312902260|ref|ZP_07761468.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0635] gi|310634319|gb|EFQ17602.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0635] Length = 359 Score = 42.7 bits (99), Expect = 0.014, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 9/88 (10%) Query: 1 MLKITDL-----FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 M++IT+L F GIG L ++ + + ++SEI ++ + FP+ + GD Sbjct: 1 MIRITNLTLGSLFDGIGVFPLAAQK----QGITLSWASEIEKAPIRITKKQFPHMIHLGD 56 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + K+ IP D++ G PCQ S G Sbjct: 57 LTKLHGGKIPPVDIVTFGSPCQNLSTIG 84 >gi|283782595|ref|YP_003373349.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05] gi|283441341|gb|ADB13807.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05] Length = 424 Score = 42.7 bits (99), Expect = 0.014, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 24/105 (22%) Query: 2 LKITDLFCGIGGIRLDLE-QTFNHRN---------VECFFSSEINP-------YSVKTYQ 44 +K+ +LF G+GG RL LE T + N + ++++ P ++ + Y+ Sbjct: 5 IKVAELFAGVGGFRLGLEGYTPSEENNFTAEPAGPFKTVWANQWEPAGQESKQFAWRCYE 64 Query: 45 ANF-PNTLIFGDIAKIKTQ------DIPDHDVLLAGFPCQPFSQA 82 F + + DIA++ + DIP+ D+L+ GFPCQ +S A Sbjct: 65 KRFGKGSCVNEDIAEVLKKFEHGECDIPNFDMLVGGFPCQDYSVA 109 >gi|229133328|ref|ZP_04262157.1| Modification methylase Sau3AI [Bacillus cereus BDRD-ST196] gi|228650144|gb|EEL06150.1| Modification methylase Sau3AI [Bacillus cereus BDRD-ST196] Length = 413 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 12/91 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-----SVKTYQANFPNTLIF-- 53 M+ + +LF G+GG R+ LE+ NH V + ++ P + Y F + I Sbjct: 1 MINVIELFAGVGGFRIGLEK-MNHFQV--VWGNQWEPSKKAQDAFHCYAQRFQDKGIHCN 57 Query: 54 GDIAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 DIA + ++I D D+++ GFPCQ +S A Sbjct: 58 QDIATVTDEEIQKIDADMIVGGFPCQDYSVA 88 >gi|15894505|ref|NP_347854.1| DNA-methyltransferase (cytosine-specific) [Clostridium acetobutylicum ATCC 824] gi|15024146|gb|AAK79194.1|AE007635_8 DNA-methyltransferase (cytosine-specific) [Clostridium acetobutylicum ATCC 824] gi|325508636|gb|ADZ20272.1| DNA-methyltransferase (cytosine-specific) [Clostridium acetobutylicum EA 2018] Length = 314 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 12/87 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++K +LF GIG R + +++ EI+P VKTY F L++ K Sbjct: 6 IIKTLELFGGIGAPRKAFKNI--GIDIKAIDYVEIDPKPVKTYNEMFKKDLMY------K 57 Query: 61 TQDIPDH----DVLLAGFPCQPFSQAG 83 TQ++ + DVL+ G PCQ FS AG Sbjct: 58 TQNVIGYNLKPDVLIHGSPCQDFSIAG 84 >gi|222151724|ref|YP_002560880.1| type II modification methyltransferase [Macrococcus caseolyticus JCSC5402] gi|222120849|dbj|BAH18184.1| type II modification methyltransferase [Macrococcus caseolyticus JCSC5402] Length = 413 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-D 55 +K+ ++F G+GG R+ LE T N+ E ++++ P ++ Y NF + D Sbjct: 4 IKVAEMFAGVGGFRIGLENT-NNNMFEVTWANQWEPSRKVQHAFDCYSRNFKTGIHSNQD 62 Query: 56 IAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 I ++ ++ + D+++ GFPCQ +S A Sbjct: 63 ITEVPNAELAATNVDMIVGGFPCQDYSVA 91 >gi|126658774|ref|ZP_01729918.1| site-specific DNA-methyltransferase [Cyanothece sp. CCY0110] gi|126619872|gb|EAZ90597.1| site-specific DNA-methyltransferase [Cyanothece sp. CCY0110] Length = 461 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 13/85 (15%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI--- 64 F G G+ L +EQT + C EI+ Y +T N PN + GDI DI Sbjct: 77 FSGAMGLDLGIEQTGFDIKLAC----EIDKYCRQTITLNKPNIALVGDINSYSADDILSY 132 Query: 65 ------PDHDVLLAGFPCQPFSQAG 83 D D+++ G PCQ FS AG Sbjct: 133 AGLTRSDDIDLIVGGPPCQAFSTAG 157 >gi|283466067|emb|CBG92842.1| hypothetical protein [Enterococcus casseliflavus] Length = 359 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 9/88 (10%) Query: 1 MLKITDL-----FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 M++IT+L F GIG L ++ + + ++SEI ++ + FP+ + GD Sbjct: 1 MIRITNLTLGSLFDGIGVFPLAAQK----QGITLSWASEIEKAPIRITKKQFPHMIHLGD 56 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + K+ IP D++ G PCQ S G Sbjct: 57 LTKLHGGKIPPVDIVTFGSPCQNLSTIG 84 >gi|315654951|ref|ZP_07907856.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC 51333] gi|315490912|gb|EFU80532.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC 51333] Length = 508 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF G GG L + +E ++SEI P+ + P GDI I Sbjct: 5 LRLGSLFDGSGGFPLAATKV----GIEPVWASEIEPFPILVTTTRLPQMQHLGDICDIDG 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + DV+ G PCQ S AG Sbjct: 61 SQLEPVDVVTFGSPCQDLSVAG 82 >gi|294673411|ref|YP_003574027.1| C-5 cytosine-specific family DNA methylase [Prevotella ruminicola 23] gi|294473101|gb|ADE82490.1| DNA methylase, C-5 cytosine-specific family [Prevotella ruminicola 23] Length = 448 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 +K+ DLFCG GG+ L ++ N+ F + + +V Y ANF + +I D++ + Sbjct: 1 MKVVDLFCGCGGLSLGFQKA--GFNILAAFDNWDDAITV--YHANFKHPVIKQDLSNVDQ 56 Query: 60 KTQDIPDH--DVLLAGFPCQPFSQAG 83 + + + D+++ G PCQ FS AG Sbjct: 57 TVEKVKKYKPDMIIGGPPCQDFSSAG 82 >gi|153855943|ref|ZP_01996894.1| hypothetical protein DORLON_02919 [Dorea longicatena DSM 13814] gi|149751791|gb|EDM61722.1| hypothetical protein DORLON_02919 [Dorea longicatena DSM 13814] Length = 433 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 14/91 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-----------ANFPNTLI 52 I +LF G+GG RL ++ E + S+ P K + A+ Sbjct: 5 ICELFAGVGGFRLGFDKL--ESGWETTWFSQWEPGKKKQWAHDCYVYHYGDCADLKGEFH 62 Query: 53 FG-DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 G DI+++ +IP+H++L+ GFPCQ +S A Sbjct: 63 TGEDISQMNKNNIPNHNLLVGGFPCQDYSVA 93 >gi|229820628|ref|YP_002882154.1| C-5 cytosine-specific DNA methylase [Beutenbergia cavernae DSM 12333] gi|229566541|gb|ACQ80392.1| C-5 cytosine-specific DNA methylase [Beutenbergia cavernae DSM 12333] Length = 316 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF G GG+ L +E F+ E + SE+N + + ++P+ GDI + Sbjct: 12 LRVGPLFSGRGGLDLAVEHVFS---AETIWFSELNETVARIFGRHWPDAPNLGDITAMDR 68 Query: 62 QDIPDHDVLLAGFPCQ 77 + D+L FPCQ Sbjct: 69 RAAAPVDILTGVFPCQ 84 >gi|179506952|gb|ACB86652.1| EagI methylase [Pantoea agglomerans] Length = 401 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 13/84 (15%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDI 64 DLF G GG+ L+ + F++E+ P +TY N PN ++ GDI I ++ Sbjct: 9 DLFAGAGGLTCGLDMA----GFQSIFANELVPVYAETYSKNHPNAEMVVGDIRAIAESNL 64 Query: 65 --------PDHDVLLAGFPCQPFS 80 + D+L G PCQ FS Sbjct: 65 MKSLGLKAGELDLLAGGPPCQGFS 88 >gi|307293581|ref|ZP_07573425.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1] gi|306879732|gb|EFN10949.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1] Length = 418 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 19/94 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDI---- 56 +K LF G GG E E + E + Y+ TY+ NFP T +F GDI Sbjct: 1 MKAVSLFAGCGGFCEGAELA----GFEITVAVEWDKYACMTYRENFPKTPLFEGDIHDFL 56 Query: 57 -------AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 K K +D+ D++ G PCQ FSQ G Sbjct: 57 KPGSDHETKYKLKDL---DLVFGGPPCQGFSQIG 87 >gi|207108548|ref|ZP_03242710.1| type II DNA modification enzyme [Helicobacter pylori HPKX_438_CA4C1] Length = 171 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 17/31 (54%), Positives = 22/31 (70%) Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 FGD+ +I D+PD D L++GFPCQ FS G Sbjct: 5 FGDLMRINPNDLPDFDALISGFPCQAFSING 35 >gi|325294602|ref|YP_004281116.1| DNA-cytosine methyltransferase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065050|gb|ADY73057.1| DNA-cytosine methyltransferase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 342 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 ++I LF G GG+ L E ++++ + +TY NFP T + D+ I Sbjct: 1 MEIVSLFSGCGGLDLGFELA----GFSIVWANDNDKDVWETYTRNFPGTYLDKRDLRVIP 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD ++ G PCQ +S+AG Sbjct: 57 VSDIPDCVGIIGGPPCQSWSEAG 79 >gi|17229768|ref|NP_486316.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] gi|17131367|dbj|BAB73975.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] Length = 431 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 19/90 (21%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF------------ 53 DLF G GG+ L EQ + + EI+P ++ NFP + Sbjct: 21 DLFAGAGGMSLGFEQA----GFDVLAAVEIDPIHCAVHEYNFPFCSVLCKSVEETTGKEI 76 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D +KI Q+I DV++ G PCQ FS G Sbjct: 77 RDRSKINNQEI---DVIICGSPCQGFSLMG 103 >gi|254456253|ref|ZP_05069682.1| Cytosine-specific methyltransferase HphIA [Candidatus Pelagibacter sp. HTCC7211] gi|207083255|gb|EDZ60681.1| Cytosine-specific methyltransferase HphIA [Candidatus Pelagibacter sp. HTCC7211] Length = 342 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 6/85 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59 ML + D F G GG L Q F + + + +KT+ NF ++ D+ Sbjct: 1 MLSVNDFFSGCGG----LSQGFKEAGFKIQVAVDKEEAFLKTFSHNFKDSQTKNLDLGDS 56 Query: 60 KT-QDIPDHDVLLAGFPCQPFSQAG 83 KT DIP D+++AG PCQ FS G Sbjct: 57 KTLNDIPKSDIIIAGPPCQGFSITG 81 >gi|294794108|ref|ZP_06759245.1| DNA (cytosine-5-)-methyltransferase [Veillonella sp. 3_1_44] gi|294455678|gb|EFG24050.1| DNA (cytosine-5-)-methyltransferase [Veillonella sp. 3_1_44] Length = 527 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 11/90 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDI 56 MLK DLF G GG+ L E T + ++EIN + TY+ N P + DI Sbjct: 1 MLKTIDLFAGAGGLSLGFEMTGKFK---VLAAAEINKNAQATYKKNIVEGKPTFTMIEDI 57 Query: 57 AKIKTQDIPDH----DVLLAGFPCQPFSQA 82 ++ + DV++ G PCQ FS A Sbjct: 58 NGYDFMELNEKLGGIDVVIGGPPCQGFSNA 87 >gi|205360554|ref|ZP_02684441.2| modification methylase DdeI [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205348823|gb|EDZ35454.1| modification methylase DdeI [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 394 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 11/88 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 +K+ D F G GG L F+ E + E++ ++ +T++ N P +L+ DI++ Sbjct: 4 VKVLDTFAGAGGFSLG----FHMAGAEIIGAIEVDSWATETFKFNHPESLVIKKDISQFS 59 Query: 61 TQDIPDH------DVLLAGFPCQPFSQA 82 ++I + D++L G PCQ FS A Sbjct: 60 DEEILETFKNNKPDIILGGPPCQGFSIA 87 >gi|167571686|ref|ZP_02364560.1| C-5 cytosine-specific DNA methylase [Burkholderia oklahomensis C6786] Length = 382 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKI 59 M + F G G R L + EC F+++ + +Y AN+ + L D+A + Sbjct: 1 MYSFYEFFAGGGMARAGLGSDW-----ECQFANDFDSKKAISYAANWGDDHLNSDDVAAL 55 Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83 T D+P H D+ A FPCQ S AG Sbjct: 56 STADLPGHVDLAWASFPCQDLSLAG 80 >gi|153955901|ref|YP_001396666.1| hypothetical protein CKL_3292 [Clostridium kluyveri DSM 555] gi|219856251|ref|YP_002473373.1| hypothetical protein CKR_2908 [Clostridium kluyveri NBRC 12016] gi|146348759|gb|EDK35295.1| Phage-related protein [Clostridium kluyveri DSM 555] gi|219569975|dbj|BAH07959.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 302 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 9/82 (10%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGGI L E +C F+ Y + + ++P+ + D+ I + + + Sbjct: 19 LFTGIGGIDLAAEWAGFKTVGQCEFAD----YPTRVLEKHWPDVERWKDVRSITVESVRE 74 Query: 67 H-----DVLLAGFPCQPFSQAG 83 VL AGFPCQP S AG Sbjct: 75 RGIQEVTVLSAGFPCQPHSVAG 96 >gi|40063394|gb|AAR38205.1| C-5 cytosine-specific DNA methylase [uncultured marine bacterium 580] Length = 435 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 26/107 (24%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN---------------VECFFSSEINPYS-----VK 41 LK+ +LF G+GG RL LE +++ E +S++ P + Sbjct: 4 LKVAELFAGVGGFRLGLEGWKKNKDFFSASSDYKKKMPPLFEVVWSNQFEPLTKSQPASD 63 Query: 42 TYQANFPNTLIFG---DIAKIKTQD---IPDHDVLLAGFPCQPFSQA 82 Y+ F ++ DI + D IP HD+L+ GFPCQ +S A Sbjct: 64 IYEQRFNSSTSLHSRVDIEHLVKNDIHSIPFHDLLVGGFPCQDYSVA 110 >gi|325270791|ref|ZP_08137382.1| modification methylase Eco47II [Prevotella multiformis DSM 16608] gi|324986907|gb|EGC18899.1| modification methylase Eco47II [Prevotella multiformis DSM 16608] Length = 437 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 8/81 (9%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 +LF G GG+ L + + F H +EI P + +T + N P+ ++ DI ++ Sbjct: 77 ELFAGCGGLALGIHKAGFRH-----VLLNEIEPVACRTLRRNRPDWNVLNEDIHRVDFSP 131 Query: 64 IPDH-DVLLAGFPCQPFSQAG 83 + D+L GFPCQ FS AG Sbjct: 132 LSGKVDLLTGGFPCQAFSYAG 152 >gi|307565390|ref|ZP_07627879.1| C-5 cytosine-specific DNA methylase [Prevotella amnii CRIS 21A-A] gi|307345840|gb|EFN91188.1| C-5 cytosine-specific DNA methylase [Prevotella amnii CRIS 21A-A] Length = 492 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 11/87 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +++ LF GIG L +NV F EIN + FPN++ + +I K Sbjct: 4 IIRHASLFSGIGAPEL-AALWLGWQNV---FHCEINEFCNTILSYWFPNSINYENI---K 56 Query: 61 TQDIPDH----DVLLAGFPCQPFSQAG 83 T D D+L GFPCQPFS AG Sbjct: 57 TTDFSKWQGQIDILTGGFPCQPFSSAG 83 >gi|291529734|emb|CBK95320.1| DNA-methyltransferase (dcm) [Eubacterium rectale M104/1] Length = 339 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 8/83 (9%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 LKI +LF GIG R L+ + ++++ EI PY+V Y + F N D+ K Sbjct: 12 LKILELFGGIGAPRKALQNLGYQLKSIDYV---EILPYAVMAYNSIFDNGYKPQDVTKWN 68 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D DVL+ G PCQ +S+ G Sbjct: 69 L----DPDVLIHGSPCQDWSKNG 87 >gi|157165013|ref|YP_001467403.1| glutathionylspermidine synthase family protein [Campylobacter concisus 13826] gi|112801055|gb|EAT98399.1| conserved hypothetical protein [Campylobacter concisus 13826] gi|158605014|gb|ABW74816.1| conserved hypothetical protein [Campylobacter concisus 13826] Length = 203 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +KI +LF GIGG RL + V + E +P K Y +PN +I GD Sbjct: 1 MKILNLFAGIGGNRLLWDNVLPGVKVT---AVEFDPEIAKAYAKRYPNDNVIVGDAWDYA 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81 ++ D D + A PCQ S+ Sbjct: 58 AKNYLDFDFIWASPPCQTHSR 78 >gi|157953822|ref|YP_001498713.1| hypothetical protein AR158_C632R [Paramecium bursaria Chlorella virus AR158] gi|156068470|gb|ABU44177.1| hypothetical protein AR158_C632R [Paramecium bursaria Chlorella virus AR158] Length = 348 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L+ DLF GIGGI L + VE E N + + P +F D+ Sbjct: 2 VLRALDLFSGIGGITHGLREI-----VEPIAFVEKNDEARSFLKKKHPEIPVFDDVCSFD 56 Query: 61 -TQDIPDHDVLLAGFPCQPFSQAG 83 T+ I D++LAG+PC FS AG Sbjct: 57 ATKWIDKVDIILAGWPCTGFSNAG 80 >gi|317495998|ref|ZP_07954360.1| DNA-cytosine methyltransferase [Gemella moribillum M424] gi|316913902|gb|EFV35386.1| DNA-cytosine methyltransferase [Gemella moribillum M424] Length = 415 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 16/97 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE-C---------FFSSEINP-----YSVKTYQAN 46 L + +LF G+GG R+ L + R + C ++++ P ++ + Y Sbjct: 3 LDVVELFAGVGGFRVGLNNITDFRKKDGCAIEKNGWNFVWANQYEPSTKAQHAFECYSKR 62 Query: 47 FP-NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 F DI K+ + IP+H +L+ GFPCQ +S A Sbjct: 63 FQIGECSNEDINKVDKKTIPNHSLLVGGFPCQDYSVA 99 >gi|282860047|ref|ZP_06269129.1| C-5 cytosine-specific DNA methylase [Prevotella bivia JCVIHMP010] gi|282587175|gb|EFB92398.1| C-5 cytosine-specific DNA methylase [Prevotella bivia JCVIHMP010] Length = 526 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 11/87 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +++ LF GIG L +NV F EIN + FPN++ + IK Sbjct: 4 IIRHASLFSGIGAPEL-AALWLGWQNV---FHCEINEFCNTILSYWFPNSI---NYENIK 56 Query: 61 TQDIPDH----DVLLAGFPCQPFSQAG 83 T D D+L GFPCQPFS AG Sbjct: 57 TTDFSKWQGQIDILTGGFPCQPFSSAG 83 >gi|325268581|ref|ZP_08135211.1| prophage LambdaBa01 protein [Prevotella multiformis DSM 16608] gi|324989109|gb|EGC21062.1| prophage LambdaBa01 protein [Prevotella multiformis DSM 16608] Length = 444 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 11/87 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +++ LF GIG L +NV F EIN + FPN++ + +I K Sbjct: 4 IIRHASLFSGIGAPEL-AALWLGWQNV---FHCEINEFCNTILNYWFPNSINYENI---K 56 Query: 61 TQDIP----DHDVLLAGFPCQPFSQAG 83 T D D+L GFPCQPFS AG Sbjct: 57 TTDFSRWQGQIDILTGGFPCQPFSSAG 83 >gi|298346372|ref|YP_003719059.1| DNA-cytosine methyltransferase [Mobiluncus curtisii ATCC 43063] gi|298236433|gb|ADI67565.1| DNA-cytosine methyltransferase [Mobiluncus curtisii ATCC 43063] Length = 508 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF G GG L + +E ++SEI P+ + P GDI I Sbjct: 5 LRLGSLFDGSGGFPLAATKV----GIEPAWASEIEPFPILVTTTRLPQMQHLGDICNIDG 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + DV+ G PCQ S AG Sbjct: 61 SQLEPVDVVTFGSPCQDLSVAG 82 >gi|315053597|ref|XP_003176173.1| modification methylase HphIA [Arthroderma gypseum CBS 118893] gi|311338019|gb|EFQ97221.1| modification methylase HphIA [Arthroderma gypseum CBS 118893] Length = 581 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDI 64 D FCG GG+ +Q + ++ + +P ++ +Y+ANFP++L D+A T Sbjct: 280 DGFCGAGGVSRGAQQA----GLRLSWAFDHSPSAMNSYRANFPSSLAETSDVADFLTNRS 335 Query: 65 PDH--DVLLAGFPCQPFSQA 82 D DVL PCQPFS A Sbjct: 336 LDIRIDVLHLSPPCQPFSPA 355 >gi|124027997|ref|YP_001013317.1| site-specific DNA methylase [Hyperthermus butylicus DSM 5456] gi|123978691|gb|ABM80972.1| Site-specific DNA methylase [Hyperthermus butylicus DSM 5456] Length = 319 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 9/86 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L++ DLF G GG + F + NP ++++++ANFP + DI ++ Sbjct: 4 LRLVDLFSGAGG----FAEGFRRAGFRILLGVDNNPAAIRSFKANFPEAVALAMDIQEVT 59 Query: 61 TQDIPDH----DVLLAGFPCQPFSQA 82 + I DV++ PC+P++ A Sbjct: 60 GKLIESLVGPVDVVIGSPPCEPYTGA 85 >gi|60202518|gb|AAX14650.1| BbvCI methyltransferase 1 [Brevibacillus brevis] Length = 429 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L DLF G GG L F+ + E++ ++ +T++ NFP T ++ DI +I Sbjct: 19 LTAIDLFAGAGGFSLG----FSMAGFRVTHAIEVDKWAAETFEVNFPRTKVVTRDIQQIS 74 Query: 61 TQDIPD-----HDVLLAGFPCQPFSQA 82 ++I D V++ G PCQ FS + Sbjct: 75 DEEIKDIIDERPLVVIGGPPCQGFSHS 101 >gi|157953702|ref|YP_001498593.1| hypothetical protein AR158_C512R [Paramecium bursaria Chlorella virus AR158] gi|156068350|gb|ABU44057.1| hypothetical protein AR158_C512R [Paramecium bursaria Chlorella virus AR158] Length = 352 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 12/91 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGD 55 ++K LF G GG L ++ +E E + ++ T++ NF + + GD Sbjct: 4 IMKAISLFAGAGGDSLGMKMA----GIEVVAFLENDTDAIYTHKRNFDKCHHIGSSVGGD 59 Query: 56 IAKIKTQDIP---DHDVLLAGFPCQPFSQAG 83 I KI ++ D D++ AGFPCQ FS AG Sbjct: 60 ITKIPDEEFKKYGDVDIIFAGFPCQGFSNAG 90 >gi|195996059|ref|XP_002107898.1| hypothetical protein TRIADDRAFT_49657 [Trichoplax adhaerens] gi|190588674|gb|EDV28696.1| hypothetical protein TRIADDRAFT_49657 [Trichoplax adhaerens] Length = 254 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 49/86 (56%), Gaps = 5/86 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 ++++ + + GIGG+ L+++ + N + + +IN + Y+ NF NT ++ +I KI Sbjct: 8 VMQVVEFYSGIGGMHYALQES--NINAKILAAIDINTVANNVYRHNFGNTPVWQREIGKI 65 Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83 +++ + D+ PCQPF++ G Sbjct: 66 SLKELQELNGDLYTMSPPCQPFTRLG 91 >gi|30263689|ref|NP_846066.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. Ames] gi|47529099|ref|YP_020448.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49186533|ref|YP_029785.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. Sterne] gi|65321007|ref|ZP_00393966.1| COG0270: Site-specific DNA methylase [Bacillus anthracis str. A2012] gi|165872817|ref|ZP_02217444.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0488] gi|167636020|ref|ZP_02394326.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0442] gi|167639742|ref|ZP_02398011.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0193] gi|170689288|ref|ZP_02880483.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0465] gi|170706823|ref|ZP_02897281.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0389] gi|177652017|ref|ZP_02934563.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0174] gi|190569254|ref|ZP_03022149.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis Tsiankovskii-I] gi|227813418|ref|YP_002813427.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. CDC 684] gi|229604763|ref|YP_002867927.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0248] gi|254683612|ref|ZP_05147472.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. CNEVA-9066] gi|254721107|ref|ZP_05182898.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A1055] gi|254735716|ref|ZP_05193422.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. Western North America USA6153] gi|254739585|ref|ZP_05197280.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. Kruger B] gi|254751154|ref|ZP_05203193.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. Vollum] gi|254759471|ref|ZP_05211496.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. Australia 94] gi|30258324|gb|AAP27552.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. Ames] gi|47504247|gb|AAT32923.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49180460|gb|AAT55836.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. Sterne] gi|164711495|gb|EDR17045.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0488] gi|167512143|gb|EDR87520.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0193] gi|167528532|gb|EDR91294.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0442] gi|170128241|gb|EDS97110.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0389] gi|170666746|gb|EDT17514.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0465] gi|172082386|gb|EDT67451.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0174] gi|190559628|gb|EDV13618.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis Tsiankovskii-I] gi|227006861|gb|ACP16604.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. CDC 684] gi|229269171|gb|ACQ50808.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0248] Length = 259 Score = 42.4 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ DL GI GI + + C EI ++ K + N+PN IF D+ K+ Sbjct: 9 LKMLDLCSGIAGISMAADWAGIDTAAFC----EIEEFNQKVLRKNYPNIPIFPDLYKLMK 64 Query: 62 Q-------DIPDHDVLLAGFPCQPFSQAG 83 Q D+ V+ AG+PCQ S G Sbjct: 65 QSLIDGGVDVDSIGVISAGYPCQGESLVG 93 >gi|56899928|ref|YP_173301.1| phage-related DNA methylase, N-terminal region [Bacillus thuringiensis serovar konkukian str. 97-27] gi|56800362|gb|AAW31029.1| phage-related DNA methylase, N-terminal region [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 239 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 L D F GIGG RL +E+ +H+ C E + ++ K+Y++ N DI I Sbjct: 3 LTFIDFFAGIGGFRLGMEEA-SHK---CIGYVEWDKFARKSYESIHNTRGEWTEHDINNI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 IP DV GFPC S A Sbjct: 59 IPGAIPKADVWTFGFPCTDISIA 81 >gi|67924199|ref|ZP_00517640.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67853953|gb|EAM49271.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 358 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 +K +LF G GG+ L LE V E++ V T Q N N IF D++ I Sbjct: 72 IKTIELFAGCGGMALGLENA----GVRHELLVEVSKDCVNTLQKNRQNWTIFQEDVSNID 127 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 Q D++ GFPCQ FS AG Sbjct: 128 FQQYYGKIDIVSGGFPCQAFSYAG 151 >gi|317489194|ref|ZP_07947712.1| C-5 cytosine-specific DNA methylase [Eggerthella sp. 1_3_56FAA] gi|325832321|ref|ZP_08165320.1| DNA (cytosine-5-)-methyltransferase [Eggerthella sp. HGA1] gi|316911702|gb|EFV33293.1| C-5 cytosine-specific DNA methylase [Eggerthella sp. 1_3_56FAA] gi|325486157|gb|EGC88611.1| DNA (cytosine-5-)-methyltransferase [Eggerthella sp. HGA1] Length = 447 Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83 SEI+P+ FP+ GDI+K++ +++ DV++ G PCQ FS AG Sbjct: 28 SEIDPFCNAVLATRFPSVPNLGDISKVEWKEMRGEIDVVIGGSPCQSFSVAG 79 >gi|325069024|ref|ZP_08127697.1| modification methylase XorII [Actinomyces oris K20] Length = 201 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--I 59 +++ DLF G GG+ + + E++P + +Y+A FP T ++ + + Sbjct: 6 IRVLDLFAGAGGLTAGFHTASSR--FRSIAAVEMDPEAAASYRATFPKTEVYAGAIQDWL 63 Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83 IP DV++ G PCQ FS G Sbjct: 64 AEGKIPTGVDVVVGGPPCQGFSTLG 88 >gi|161528981|ref|YP_001582807.1| DNA-cytosine methyltransferase [Nitrosopumilus maritimus SCM1] gi|160340282|gb|ABX13369.1| DNA-cytosine methyltransferase [Nitrosopumilus maritimus SCM1] Length = 360 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 10/85 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + DLF G GG+ L F + + + E + + +TY NF T LI DI IK+ Sbjct: 8 VIDLFAGSGGLSLG----FKNAGFKVIAAVEFDKSAAETYSKNFKETKLIVDDIKNIKSN 63 Query: 63 DIP-----DHDVLLAGFPCQPFSQA 82 ++ + ++ G PCQP+S A Sbjct: 64 ELKKITSKERFCVIGGPPCQPYSNA 88 >gi|302531233|ref|ZP_07283575.1| DNA-cytosine methyltransferase [Streptomyces sp. AA4] gi|302440128|gb|EFL11944.1| DNA-cytosine methyltransferase [Streptomyces sp. AA4] Length = 371 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 9/83 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKIKT 61 + F GIG +RL LE + +S++I P Y+A+F + + GD+A ++ Sbjct: 11 EFFAGIGLVRLGLEPA----GFDVAWSNDIEPAKQAMYEAHFNDQGAHEYVLGDVAALRG 66 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 D+P + A FPC S AG Sbjct: 67 ADLPAGLSLAWASFPCTDLSLAG 89 >gi|328710652|ref|XP_001949338.2| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Acyrthosiphon pisum] Length = 328 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 +++ + F GIGG+ L++ N N E + +IN + Y+ FP+T + +I + Sbjct: 1 MRVIEFFSGIGGMHFALKEC-NLENFEVVLAVDINTVANAVYRHFFPSTNLRDLNILSLS 59 Query: 61 TQ--DIPDHDVLLAGFPCQPFSQAG 83 + D D+LL PCQPF++ G Sbjct: 60 PEQFDAYHPDILLMSPPCQPFTRNG 84 >gi|170757755|ref|YP_001781752.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] gi|169122967|gb|ACA46803.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] Length = 561 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 4/85 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAK 58 MLK+ LF GIG L+ E E++ Y+VK+Y + GDI K Sbjct: 1 MLKVRTLFSGIGSPERALKDL--QIPYELVDFCEVDKYAVKSYCSVHGVSEEKNLGDITK 58 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + +++P D+L+ GFPC S AG Sbjct: 59 VWGRNLPYADLLVWGFPCPDISVAG 83 >gi|188581100|ref|YP_001924545.1| DNA-cytosine methyltransferase [Methylobacterium populi BJ001] gi|179344598|gb|ACB80010.1| DNA-cytosine methyltransferase [Methylobacterium populi BJ001] Length = 446 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 16/89 (17%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQD 63 DLF G GG+ L EQ F+ R ++EI+P ++ NFPN + + + + Sbjct: 8 DLFSGAGGLSLGFEQAGFDVRA-----AAEIDPVHAAVHKFNFPNCAVLARSVVGLTAAE 62 Query: 64 IPDH---------DVLLAGFPCQPFSQAG 83 I + DV+ G PCQ FS G Sbjct: 63 IREAAALGPSDRVDVVFGGPPCQGFSMIG 91 >gi|325969823|ref|YP_004246015.1| DNA-cytosine methyltransferase [Vulcanisaeta moutnovskia 768-28] gi|323709026|gb|ADY02513.1| DNA-cytosine methyltransferase [Vulcanisaeta moutnovskia 768-28] Length = 329 Score = 42.4 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 10/84 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + DLF G GG + F + EI+ + +TY NFP+ ++ DI I+ + Sbjct: 5 VIDLFAGAGG----FSRGFLDAGFDVVLGIEIDINAARTYSYNFPDAVMLVDDIKNIRGE 60 Query: 63 DIPDH-----DVLLAGFPCQPFSQ 81 D+ + DV++ G PC+ F++ Sbjct: 61 DVIKYIGDKPDVVIGGSPCEAFTE 84 >gi|315656923|ref|ZP_07909810.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492878|gb|EFU82482.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 503 Score = 42.4 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L + ++ ++SE++P++++ + N P GDI + Sbjct: 4 LTLGSLFDGSGGFPLAAKMV----GIKPMWASEVDPFAIRVTKKNLPEVRHVGDINLLDG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + DV+ G PCQ S AG Sbjct: 60 GRLQPVDVITFGSPCQDLSIAG 81 >gi|329890824|ref|ZP_08269167.1| cytosine-specific methyltransferase NlaX [Brevundimonas diminuta ATCC 11568] gi|328846125|gb|EGF95689.1| cytosine-specific methyltransferase NlaX [Brevundimonas diminuta ATCC 11568] Length = 395 Score = 42.4 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAK 58 M + F G G R L + C F+++ + TYQAN+ L GDI Sbjct: 1 MADFYEFFAGAGMARAGLGDGWT-----CQFANDFDGKKGLTYQANWGTGGELHVGDIRN 55 Query: 59 IKTQDIP-DHDVLLAGFPCQPFSQAG 83 ++TQ +P + D++ FPCQ S AG Sbjct: 56 VETQQLPGEADLIWGSFPCQDLSLAG 81 >gi|60098349|emb|CAH65005.1| hypothetical protein RCJMB04_1a16 [Gallus gallus] Length = 102 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L++ +L+ GIGG+ L+++ E + ++N + + Y+ NFP+T ++ + Sbjct: 4 LRVLELYSGIGGMHQALKESCI--CAEVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGIT 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQA 82 +K D D++L PCQPF+++ Sbjct: 62 LKEFDRLSFDMILMSPPCQPFTRS 85 >gi|320007884|gb|ADW02734.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC 33331] Length = 660 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 11/85 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-- 63 DLF G GG+ L LE+ + + + +++T+ ANFP + D+ +D Sbjct: 46 DLFSGAGGLSLGLERA----GWTVAAAVDFDQRALRTHAANFPGMSLHMDLGNPDERDRL 101 Query: 64 ----IPDH-DVLLAGFPCQPFSQAG 83 P D++ G PCQPFS+AG Sbjct: 102 VEMLAPAKIDLVAGGPPCQPFSRAG 126 >gi|288919495|ref|ZP_06413826.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f] gi|288349098|gb|EFC83344.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f] Length = 642 Score = 42.0 bits (97), Expect = 0.024, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 17/92 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L + DLF G GG+ L LEQ + + +P + +T++ +F + D++ Sbjct: 31 LLVADLFSGAGGLSLGLEQA----GLRVVLGVDHDPEATETHRHHFAGLTLDQDLSDPGR 86 Query: 59 -------IKTQDIPDHDVLLAGFPCQPFSQAG 83 I++ + DV++ G PCQPFS+AG Sbjct: 87 VDEIAGLIRSLRL---DVVVGGPPCQPFSRAG 115 >gi|326564851|gb|EGE15057.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 103P14B1] Length = 288 Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 9/85 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62 I LF GIGG + E+ H + + EINP FP+ F D+ + Sbjct: 16 IGSLFAGIGGFDVGFEKAGFHTS----WQVEINPVCRAVLSDRFPHAKQFADVKTCLPEL 71 Query: 63 -DIPDH---DVLLAGFPCQPFSQAG 83 +P+ DV+ GFPCQ S AG Sbjct: 72 LSLPNGGQVDVIAGGFPCQDVSVAG 96 >gi|224418258|ref|ZP_03656264.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter canadensis MIT 98-5491] gi|253827583|ref|ZP_04870468.1| putative methylase [Helicobacter canadensis MIT 98-5491] gi|313141791|ref|ZP_07803984.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis MIT 98-5491] gi|253510989|gb|EES89648.1| putative methylase [Helicobacter canadensis MIT 98-5491] gi|313130822|gb|EFR48439.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis MIT 98-5491] Length = 589 Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 11/91 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 M +I DLFCG GG LEQ ++N + + ++ T+ NF + I GDI Sbjct: 1 MYRILDLFCGAGGFSYGLEQ---NKNFKTVIGLDFEKAAIDTFNHNFKQAIGICGDITNK 57 Query: 60 KTQDIPDH-------DVLLAGFPCQPFSQAG 83 + +D + ++++ G PCQ FS G Sbjct: 58 EVKDKVVNLAKELKVNMVIGGPPCQGFSLKG 88 >gi|319936414|ref|ZP_08010830.1| cytosine-specific methyltransferase [Coprobacillus sp. 29_1] gi|319808529|gb|EFW05081.1| cytosine-specific methyltransferase [Coprobacillus sp. 29_1] Length = 418 Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 17/95 (17%) Query: 4 ITDLFCGIGGIRLDLEQTF----NHRNVE-----CFFSSEINPYSVKTYQANFPNTLIFG 54 + +LF G+GG R+ L N R +E ++++ P S K A FG Sbjct: 5 VVELFAGVGGFRVGLNHITGFDENGRAIENGEWNFVWANQWEP-STKVQHAFDCYCKRFG 63 Query: 55 -------DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI+ + DIP+H +L+ GFPCQ +S A Sbjct: 64 NENHSNVDISLVNKSDIPNHTLLVGGFPCQDYSVA 98 >gi|115443362|ref|XP_001218488.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114188357|gb|EAU30057.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 2106 Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 14/78 (17%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT----------QD 63 +R E+ F R++ FS+EI P+ + NF IF D+A++K + Sbjct: 135 LRTHFERNFEFRHL---FSAEIVPFKQAYIERNFHPPFIFRDVAELKDRVAQTAYGSLEK 191 Query: 64 IPDH-DVLLAGFPCQPFS 80 IP + D+L+AGF C FS Sbjct: 192 IPKNADILIAGFSCVDFS 209 >gi|167461724|ref|ZP_02326813.1| site-specific DNA-methyltransferase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 345 Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 15/87 (17%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGGI L + T +E E + + + ++P+ I+ D+ + T+++ + Sbjct: 6 LFSGIGGIDLAAKWT----GIETVAFCEKESFPQQVLRKHWPDIPIYDDVCAL-TREVLE 60 Query: 67 HDVLL----------AGFPCQPFSQAG 83 D ++ AG+PCQPFS AG Sbjct: 61 QDGIITRNRTIDLISAGYPCQPFSNAG 87 >gi|119026251|ref|YP_910096.1| modification methylase Sau3AI [Bifidobacterium adolescentis ATCC 15703] gi|118765835|dbj|BAF40014.1| modification methylase Sau3AI [Bifidobacterium adolescentis ATCC 15703] Length = 424 Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 24/105 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHR----------NVECFFSSEINP-------YSVKTYQ 44 +K+ +LF G+GG RL L+ N + N +++ P ++ + Y+ Sbjct: 5 IKVVELFAGVGGFRLGLDGYSNPKYPDFEMKPAGNFHTVWANNWEPDGRPTKQFAWRCYE 64 Query: 45 ANF-PNTLIFGDIAKIKTQ------DIPDHDVLLAGFPCQPFSQA 82 F + + DIA + Q ++P+ D+L+ GFPCQ +S A Sbjct: 65 KRFGEGSCVNEDIAVVVEQIKNGERELPEFDMLVGGFPCQDYSVA 109 >gi|315644199|ref|ZP_07897369.1| DNA-cytosine methyltransferase [Paenibacillus vortex V453] gi|315280574|gb|EFU43863.1| DNA-cytosine methyltransferase [Paenibacillus vortex V453] Length = 485 Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 28/108 (25%) Query: 2 LKITDLFCGIGGIRLDLE--------------------QTFN---HRNV-ECFFSSEINP 37 + LF G GG+ + E FN H+++ +++++ Sbjct: 57 FNLVSLFSGCGGLDMGFELAGLAAVIGEEAAMEAFKDKDKFNEVRHKSIFHTIYTNDLFT 116 Query: 38 YSVKTYQANFPNTLI--FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + ++Y+ NFP +++ DI K+K + P DV++ GFPC FS+AG Sbjct: 117 EANESYKINFPQSVVQHRKDIRKVK--NFPKADVVVGGFPCPGFSEAG 162 >gi|18313899|ref|NP_560566.1| C-5 cytosine-specific DNA methylase [Pyrobaculum aerophilum str. IM2] gi|18161467|gb|AAL64748.1| C-5 cytosine-specific DNA methylase [Pyrobaculum aerophilum str. IM2] Length = 463 Score = 42.0 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 18/94 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------------- 47 ++ LF G GG+ L + + + + F++++N Y+ TY NF Sbjct: 4 FRVVSLFSGAGGLDLGFKMSGMY---QIIFANDVNLYATTTYAKNFEMKLLKCGGLTEAE 60 Query: 48 PNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFS 80 PN ++ D+ K+ + + DV++ G PCQ FS Sbjct: 61 PNVVLSCDVEKVLFSPLAGEADVVVGGPPCQDFS 94 >gi|157164649|ref|YP_001466261.1| putative two-component sensor [Campylobacter concisus 13826] gi|112801493|gb|EAT98837.1| modification methylase HphIA (Cytosine-specificmethyltransferase HphIA) (M.HphIA) (M.Hphi(C)) [Campylobacter concisus 13826] Length = 489 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 12/88 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAKIK 60 I DLFCG GG F+ +++I+ +++TY N P ++ I D K+ Sbjct: 118 IIDLFCGAGG----FSYGFSKMGYNILLANDIDKDALRTYSFNHPEINSSRIINDDVKLI 173 Query: 61 TQDIPDH-----DVLLAGFPCQPFSQAG 83 +Q+I + D+++ G PCQ FS A Sbjct: 174 SQNIHKYVNLQVDMIIGGPPCQSFSSAN 201 >gi|294463393|gb|ADE77228.1| unknown [Picea sitchensis] Length = 380 Score = 42.0 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH-RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++ + + GIGG+R LEQ+ H + VE F +IN + + Y+ NF ++ G+I + Sbjct: 12 FRVLEFYSGIGGMRFSLEQSGIHAKVVEAF---DINNIANEVYKHNFGHSPYQGNIQSLT 68 Query: 61 TQDIPDH--DVLLAGFPCQPFSQAG 83 + + L PCQP+++ G Sbjct: 69 ASQLDKFRANAWLLSPPCQPYTRQG 93 >gi|12583593|emb|CAC27339.1| Sth368IM methyltranferase [Streptococcus thermophilus] gi|15485439|emb|CAC67533.1| M.Sth368I methyltransferase [Streptococcus thermophilus] Length = 421 Score = 42.0 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQT----FNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--- 54 + + +LF G+GG R+ LE + F R + S + + + Y +FP++ G Sbjct: 1 MNVLELFAGVGGFRIGLENSDKNFFKTRWSNQWEPSRKSQDAFEVYNYHFPDSENIGYSI 60 Query: 55 -DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI+ K + D D+++ GFPCQ +S A Sbjct: 61 SDISDEKFASM-DADMIVGGFPCQDYSVA 88 >gi|2895947|gb|AAC40130.1| putative DNA cytosine methyltransferase DNMT2 [Mus musculus] Length = 415 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L++ +L+ GIGG+ L ++ H + ++N + + Y+ NFP+T L+ I I Sbjct: 4 LRVLELYSGIGGMHHALRES--HIPAHVVAAIDVNTVANEVYKHNFPHTHLLSKTIEGIS 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 +D +++L PCQPF++ G Sbjct: 62 LEDFDKLSFNMILMSPPCQPFTRIG 86 >gi|326921696|ref|XP_003207092.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Meleagris gallopavo] Length = 398 Score = 42.0 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L++ +L+ GIGG+ L+++ E + ++N + + Y+ NFP+T ++ + Sbjct: 4 LRVLELYSGIGGMHQALKESC--VCAEVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGIT 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 +K D D++L PCQPF++ G Sbjct: 62 LKEFDRLSFDMILMSPPCQPFTRIG 86 >gi|157952870|ref|YP_001497762.1| hypothetical protein NY2A_B566R [Paramecium bursaria Chlorella virus NY2A] gi|155123097|gb|ABT14965.1| hypothetical protein NY2A_B566R [Paramecium bursaria Chlorella virus NY2A] Length = 349 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56 +K LF G GG L ++ +E E + ++ T++ NF + + GDI Sbjct: 19 MKAISLFAGAGGDSLGMKMA----GIEVVAFLENDTDAIYTHKRNFDKCHHIGSSVGGDI 74 Query: 57 AKIKTQDIP---DHDVLLAGFPCQPFSQAG 83 KI ++ D D++ AGFPCQ FS AG Sbjct: 75 TKIPDEEFKKYGDVDIIFAGFPCQGFSNAG 104 >gi|229183237|ref|ZP_04310467.1| Site-specific DNA-methyltransferase [Bacillus cereus BGSC 6E1] gi|228600376|gb|EEK57966.1| Site-specific DNA-methyltransferase [Bacillus cereus BGSC 6E1] Length = 592 Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 19/96 (19%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLIF 53 KI DLF G GG+ EQT E + EIN +V+TY N P Sbjct: 14 KIIDLFAGAGGLSNGFEQT---GRFEIVGAVEINKEAVETYICNHQNNKEIIIKPKNSEI 70 Query: 54 GDIAKIKTQDI-------PDHDVLLAGFPCQPFSQA 82 DI+ I + P V++ G PCQ FS A Sbjct: 71 SDISSINFHEFMMQKGIDPSETVVIGGPPCQGFSNA 106 >gi|218244975|ref|YP_002370346.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|218165453|gb|ACK64190.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] Length = 423 Score = 42.0 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L + +LF G GG+ L LE ++ EI+ V T Q N P I D+ KI Sbjct: 73 LSVIELFAGCGGMALGLENA----GLKTELLVEIDRDCVNTLQKNRPYWPILQEDVTKID 128 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 + D++ GFPCQ FS AG Sbjct: 129 FRSYQGKIDIVSGGFPCQAFSYAG 152 >gi|163855343|ref|YP_001629641.1| putative DNA-cytosine methyltransferase [Bordetella petrii DSM 12804] gi|163259071|emb|CAP41370.1| putative DNA-cytosine methyltransferase [Bordetella petrii] Length = 197 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 26 NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQ 81 +E + +EI P+ +P GD+A I Q +P D+L+ G PCQ FS Sbjct: 34 GLEAAWFAEIEPFPSAVLAHRYPRVPNLGDMAAIARQVRAGTVPAPDILVGGTPCQSFSV 93 Query: 82 AG 83 AG Sbjct: 94 AG 95 >gi|26341152|dbj|BAC34238.1| unnamed protein product [Mus musculus] Length = 415 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L++ +L+ GIGG+ L ++ H + ++N + + Y+ NFP+T L+ I I Sbjct: 4 LRVLELYSGIGGMHHALRES--HIPAHVVAAIDVNTVANEVYKHNFPHTHLLSKTIEGIS 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 +D +++L PCQPF++ G Sbjct: 62 LEDFDKLSFNMILMSPPCQPFTRIG 86 >gi|161016803|ref|NP_034197.3| tRNA (cytosine-5-)-methyltransferase [Mus musculus] gi|20141317|sp|O55055|TRDMT_MOUSE RecName: Full=tRNA (cytosine-5-)-methyltransferase; AltName: Full=DNA (cytosine-5)-methyltransferase-like protein 2; Short=Dnmt2; AltName: Full=DNA methyltransferase homolog MmuIIP; Short=DNA MTase homolog MmuIIP; Short=M.MmuIIP; AltName: Full=Met-2 gi|2627433|gb|AAC53529.1| putative DNA methyltransferase [Mus musculus] gi|56971714|gb|AAH87892.1| TRNA aspartic acid methyltransferase 1 [Mus musculus] gi|123857912|emb|CAM15443.1| tRNA aspartic acid methyltransferase 1 [Mus musculus] gi|123858289|emb|CAM16855.1| tRNA aspartic acid methyltransferase 1 [Mus musculus] gi|148676105|gb|EDL08052.1| DNA methyltransferase 2 [Mus musculus] Length = 415 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L++ +L+ GIGG+ L ++ H + ++N + + Y+ NFP+T L+ I I Sbjct: 4 LRVLELYSGIGGMHHALRES--HIPAHVVAAIDVNTVANEVYKHNFPHTHLLSKTIEGIS 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 +D +++L PCQPF++ G Sbjct: 62 LEDFDKLSFNMILMSPPCQPFTRIG 86 >gi|299065029|emb|CBJ36133.1| DNA-cytosine methyltransferase [Ralstonia solanacearum CMR15] Length = 385 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKTQDI 64 + F G G R L + + +C F+++ + TY+ N+ + L+ GD+ ++K ++ Sbjct: 6 EFFAGGGMARAGLGEGW-----QCLFANDFDHKKGVTYRQNWGEDELLTGDVRQVKPNNL 60 Query: 65 PDHDVLLAG-FPCQPFSQAG 83 PD L+ G FPCQ S AG Sbjct: 61 PDRANLIWGSFPCQDLSLAG 80 >gi|213972219|ref|ZP_03400299.1| cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato T1] gi|289626827|ref|ZP_06459781.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|301386398|ref|ZP_07234816.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato Max13] gi|302062510|ref|ZP_07254051.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato K40] gi|213923026|gb|EEB56641.1| cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato T1] gi|330870292|gb|EGH05001.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 382 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKI 59 M + F G G R L + +C F+++ +P +Y N+ + L GD+A + Sbjct: 1 MANFYEFFAGGGMARAGLGPDW-----QCMFANDFDPKKAASYATNWGDDHLRVGDVAAL 55 Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83 T ++P D+ A FPCQ S AG Sbjct: 56 TTTELPGVVDLAWASFPCQDLSLAG 80 >gi|284052894|ref|ZP_06383104.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] gi|79835469|gb|ABB52095.1| Mod [Arthrospira platensis] gi|291565921|dbj|BAI88193.1| type II DNA modification methyltransferase [Arthrospira platensis NIES-39] Length = 314 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 ++ DLF G GG+ L F + + + EI ++K YQ NF + + D++K Sbjct: 1 MRTIDLFAGCGGLSLG----FQNAGFDMKAAFEIWKPAIKVYQRNFSHPIFQVDLSKESV 56 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I T +V++ G PCQ FS AG Sbjct: 57 INTLGEWKPEVIIGGPPCQDFSSAG 81 >gi|332158207|ref|YP_004423486.1| modification methylase [Pyrococcus sp. NA2] gi|331033670|gb|AEC51482.1| modification methylase [Pyrococcus sp. NA2] Length = 310 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 6/79 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + DLF G GG L F + + E KTY NFP +I DI + Sbjct: 12 VIDLFAGAGGFSLG----FKLAGFKIISAIENFKPKAKTYSQNFPEVNVIVSDIKLVNPL 67 Query: 63 DIPDH-DVLLAGFPCQPFS 80 D+ D DV++ G PC+PF+ Sbjct: 68 DVADKVDVIIGGPPCEPFT 86 >gi|145207311|gb|AAI14323.2| TRNA aspartic acid methyltransferase 1 [Danio rerio] Length = 381 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L++ +L+ GIGG+ L+++ E + ++N + Y+ NFP T L+ I + Sbjct: 7 LRVFELYSGIGGMHYALKESL--VPAEVVAAVDVNTTANLIYKHNFPTTQLLPKTIEGMT 64 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 QD + D++L PCQPF++ G Sbjct: 65 LQDFDRLNFDMILMSPPCQPFTRIG 89 >gi|90592696|ref|YP_529611.1| hypothetical protein CDBPCV119_gp60 [Clostridium phage phi CD119] gi|71482543|gb|AAX53484.1| hypothetical protein [Clostridium phage phi CD119] Length = 260 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 7/76 (9%) Query: 11 IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAKIKTQDIPDH 67 IGG RL +E+ H+ C E + ++ +Y A + DI +I+T++IP Sbjct: 18 IGGFRLGMEKA-GHK---CLGHCEYDKFANLSYNAMHKPKEDEWFERDIREIRTENIPRA 73 Query: 68 DVLLAGFPCQPFSQAG 83 DV GFPCQ S AG Sbjct: 74 DVWCFGFPCQDISVAG 89 >gi|89941477|ref|NP_001018153.1| tRNA (cytosine-5-)-methyltransferase [Danio rerio] gi|62433271|dbj|BAD95483.1| DNA methyltransferase [Danio rerio] Length = 381 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L++ +L+ GIGG+ L+++ E + ++N + Y+ NFP T L+ I + Sbjct: 7 LRVFELYSGIGGMHYALKESL--VPAEVVAAVDVNTTANLIYKHNFPTTQLLPKTIEGMT 64 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 QD + D++L PCQPF++ G Sbjct: 65 LQDFDRLNFDMILMSPPCQPFTRIG 89 >gi|302534627|ref|ZP_07286969.1| predicted protein [Streptomyces sp. C] gi|302443522|gb|EFL15338.1| predicted protein [Streptomyces sp. C] Length = 194 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 4/84 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L+I +L G GG+ + + R + +E P +P+ GDI +I Sbjct: 25 LLEILELCAGYGGLGMAVAPLVGGR---IAYVAESAPGPSAVLAERYPDAPNLGDIREID 81 Query: 61 -TQDIPDHDVLLAGFPCQPFSQAG 83 TQ + DV+ AGFPCQ S AG Sbjct: 82 WTQLVGKVDVITAGFPCQDISIAG 105 >gi|326381717|ref|ZP_08203411.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL B-59395] gi|326199964|gb|EGD57144.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL B-59395] Length = 356 Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 10/84 (11%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK---- 60 DLF G GG+ L+Q+ +EC +S+ ++KTY N P+ I D+ K+ Sbjct: 13 DLFAGAGGLSWGLQQS----GMECLLASDYWGDALKTYSHNMPDHPTIECDVRKLTMPKL 68 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 Q +P+ D ++ G PCQ +S G Sbjct: 69 AQLLPEKPDWVVGGPPCQGYSTVG 92 >gi|26325124|dbj|BAC26316.1| unnamed protein product [Mus musculus] Length = 415 Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L++ +L+ GIGG+ L ++ H + ++N + + Y+ NFP+T L+ I I Sbjct: 4 LRVLELYSGIGGMHHALRKS--HIPAHVVAAIDVNTVANEVYKHNFPHTHLLSKTIEGIS 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 +D +++L PCQPF++ G Sbjct: 62 LEDFDKLSFNMILMSPPCQPFTRIG 86 >gi|237739124|ref|ZP_04569605.1| C-5 cytosine-specific DNA methylase [Fusobacterium sp. 2_1_31] gi|229423724|gb|EEO38771.1| C-5 cytosine-specific DNA methylase [Fusobacterium sp. 2_1_31] Length = 361 Score = 41.6 bits (96), Expect = 0.033, Method: Composition-based stats. Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 15/92 (16%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 LK +LF G GG+ L +E+ FN + EI+ + T + N PN +I +IA I Sbjct: 29 LKAIELFAGAGGLALGVEKAGFNTIGL-----IEIDKNACNTLKLNRPNWNVINENIANI 83 Query: 60 KTQDIPDH--------DVLLAGFPCQPFSQAG 83 +++ D D+L G PCQ FS AG Sbjct: 84 SLKNLEDFFSIKKGELDLLSGGAPCQAFSYAG 115 >gi|52788777|gb|AAU87368.1| MnlI m5C-methyltransferase [Moraxella nonliquefaciens] Length = 351 Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 14/91 (15%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAK- 58 + I DLFCG GG+ EQ FN + N ++ TYQ N N+ I GD+ Sbjct: 1 MNILDLFCGAGGLSYGFEQAGFN-----AVLGVDFNEKALDTYQKNHKNSQILCGDLTSC 55 Query: 59 ------IKTQDIPDHDVLLAGFPCQPFSQAG 83 +K + +L G PCQ FS G Sbjct: 56 ELKDEIVKIAKTNNVRAVLGGPPCQGFSLKG 86 >gi|67514595|ref|NP_001020002.1| tRNA (cytosine-5-)-methyltransferase [Gallus gallus] gi|66766328|dbj|BAD99025.1| DNA methyltransferase 2 [Gallus gallus] Length = 398 Score = 41.6 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L++ +L+ GIGG+ L+++ E + ++N + + Y+ NFP+T ++ + Sbjct: 4 LRVLELYSGIGGMHQALKESC--ICAEVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGIT 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 +K D D++L PCQPF++ G Sbjct: 62 LKEFDRLSFDMILMSPPCQPFTRIG 86 >gi|79835453|gb|ABB52085.1| Mod [Arthrospira platensis] gi|291569776|dbj|BAI92048.1| type II DNA modification methyltransferase [Arthrospira platensis NIES-39] Length = 429 Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 11/84 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + D F G GG L + H + EI+ ++ +T+Q N PN LI GDI I + Sbjct: 42 VLDTFAGAGGFSLGFQWAGAH----IIGAIEIDEWAGETFQFNHPNAHLIKGDIKGITDE 97 Query: 63 DIPDH------DVLLAGFPCQPFS 80 I D ++L G PCQ FS Sbjct: 98 QILDTFGEIKPHIILGGIPCQGFS 121 >gi|119873163|ref|YP_931170.1| DNA-cytosine methyltransferase [Pyrobaculum islandicum DSM 4184] gi|119674571|gb|ABL88827.1| DNA-cytosine methyltransferase [Pyrobaculum islandicum DSM 4184] Length = 319 Score = 41.6 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59 M + D+F G GG L F + + EI+ + +TY AN NT++ D+A + Sbjct: 1 MYNVADIFSGAGGFGLG----FRKAGFKIKVAVEIDRDAARTYSANHQNTVVLQEDVANV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQA 82 +D+ + +++ PC+PF+ A Sbjct: 57 DYKDLVKYGGEIKIIIGSPPCEPFTAA 83 >gi|260579295|ref|ZP_05847178.1| modification methylase NaeI (cytosine-specificmethyltransferase NaeI) (M.NaeI) [Corynebacterium jeikeium ATCC 43734] gi|258602594|gb|EEW15888.1| modification methylase NaeI (cytosine-specificmethyltransferase NaeI) (M.NaeI) [Corynebacterium jeikeium ATCC 43734] Length = 372 Score = 41.6 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 8/85 (9%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 L ++ G GG L LE F HR V E++ ++V T +AN P ++ GD+ Sbjct: 36 LTSVEICAGAGGQALGLEAAGFIHRAV-----VELDGHAVSTLRANRPAWNIVHGDVLDF 90 Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83 D D+L G PC PFS AG Sbjct: 91 DISPFADDLDLLAGGVPCPPFSIAG 115 >gi|293596744|ref|ZP_05263998.2| DNA-methyltransferase [Listeria monocytogenes J2818] gi|293592003|gb|EFG00338.1| DNA-methyltransferase [Listeria monocytogenes J2818] Length = 327 Score = 41.6 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++I +LF GIG R LE +++ EI P++V+ Y F N + D+ K Sbjct: 8 MVQILELFGGIGAPRKALENL--GVDIKSLDYVEILPFAVQAYNNIFSNDYVAQDVTKWN 65 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+L+ G PCQ +S+ G Sbjct: 66 MS----VDLLIHGSPCQDWSKNG 84 >gi|23428398|gb|AAL15430.1| DNA methyltransferase A [Moraxella nonliquefaciens] Length = 351 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 14/91 (15%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAK- 58 + I DLFCG GG+ EQ FN + N ++ TYQ N N+ I GD+ Sbjct: 1 MNILDLFCGAGGLSYGFEQAGFN-----AVLGVDFNEKALDTYQKNHKNSQILCGDLTSC 55 Query: 59 ------IKTQDIPDHDVLLAGFPCQPFSQAG 83 +K + +L G PCQ FS G Sbjct: 56 ELKDEIVKIAKTNNVRAVLGGPPCQGFSLKG 86 >gi|68536951|ref|YP_251655.1| putative DNA restriction-modification system, DNA methylase [Corynebacterium jeikeium K411] gi|68264550|emb|CAI38038.1| putative DNA restriction-modification system, DNA methylase [Corynebacterium jeikeium K411] Length = 341 Score = 41.6 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 8/85 (9%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 L ++ G GG L LE F HR V E++ ++V T +AN P ++ GD+ Sbjct: 5 LTSVEICAGAGGQALGLEAAGFIHRAV-----VELDGHAVSTLRANRPAWNIVHGDVLDF 59 Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83 D D+L G PC PFS AG Sbjct: 60 DISPFADDLDLLAGGVPCPPFSIAG 84 >gi|325564165|gb|ADZ31422.1| M.PsuNI [Pseudomonas stutzeri] Length = 422 Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 19/89 (21%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI------ 59 LF G GG +E + V+ + E++ ++ +TY+ NFP+T +F GD+ Sbjct: 23 LFSGCGGFCEGIENS----GVKVKVAVELDKFACQTYRHNFPSTPLFEGDVHNFLADGSG 78 Query: 60 -----KTQDIPDHDVLLAGFPCQPFSQAG 83 + QD+ D++ G PCQ +SQ G Sbjct: 79 HEDEYRLQDV---DLVFGGPPCQGYSQIG 104 >gi|299820316|gb|ADJ54326.1| C5-cytosine specific methylase [archaeon enrichment culture clone 1(2010)] Length = 396 Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ DL+ G+GG+ L + + + EIN +V TY N AK Sbjct: 4 LKVLDLYSGLGGLSLGVAIALRPKEI---IGLEINKNAVDTYNLNLSRY-----NAKAFR 55 Query: 62 QDI----PD--HDVLLAGFPCQPFSQA 82 QD+ P+ +D+++ G PC+PFS A Sbjct: 56 QDVLQWQPEGHYDLIIGGSPCEPFSIA 82 >gi|328947595|ref|YP_004364932.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447919|gb|AEB13635.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 476 Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 13/86 (15%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI-- 64 F G G+ +E+ + +SEI P + KT N PN + GDI +DI Sbjct: 80 FFSGAMGLDYGIEKA----GIHPLLASEIEPNARKTILLNRPNIGLIGDINNYSAKDIRK 135 Query: 65 -------PDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS AG Sbjct: 136 FANISEKQEIDLVIGGPPCQAFSTAG 161 >gi|319787207|ref|YP_004146682.1| DNA-cytosine methyltransferase [Pseudoxanthomonas suwonensis 11-1] gi|317465719|gb|ADV27451.1| DNA-cytosine methyltransferase [Pseudoxanthomonas suwonensis 11-1] Length = 443 Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDI 64 DLF G GG+ L EQ + + EI+P + NFP+ + + + Q I Sbjct: 8 DLFAGAGGLSLGFEQA----GFDVVAAVEIDPVHAAVHAYNFPHCAVLPRSVTDLTAQHI 63 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 D DV+ G PCQ FS G Sbjct: 64 RDAAGIGTRKVDVVFGGAPCQGFSLIG 90 >gi|315230475|ref|YP_004070911.1| DNA-cytosine methyltransferase [Thermococcus barophilus MP] gi|315183503|gb|ADT83688.1| DNA-cytosine methyltransferase [Thermococcus barophilus MP] Length = 321 Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 M I DLF G GG + F + + E TY+ NFP ++ DI +I Sbjct: 1 MYTIIDLFAGAGG----FSRGFKEAGFKILAAIENFAPKADTYKFNFPEVRMYVEDIKRI 56 Query: 60 KT----QDIPDHDVLLAGFPCQPFSQA 82 T +D+ DV++ G PC+P++ A Sbjct: 57 HTIDVMRDVGVPDVIIGGPPCEPYTAA 83 >gi|313891845|ref|ZP_07825450.1| putative modification methylase HhaI [Dialister microaerophilus UPII 345-E] gi|313119839|gb|EFR43026.1| putative modification methylase HhaI [Dialister microaerophilus UPII 345-E] Length = 394 Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKIKTQD 63 DLF GIGG LE+ ++C E + ++ K+Y+A + ++ DI K + Sbjct: 9 DLFSGIGGFHSGLEKV----GMKCVGWCEKDKFAQKSYRALYDTERLWFADDIRKCRGWG 64 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P+ + GFPCQ S AG Sbjct: 65 MPNATLWSFGFPCQDISIAG 84 >gi|317481261|ref|ZP_07940332.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36] gi|316902594|gb|EFV24477.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36] Length = 461 Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83 E F E+N + + FPN+ + DIAK + D+L GFPCQPFS AG Sbjct: 25 ENAFHCEVNDFCNIILKYWFPNSEHYEDIAKTDFKKWRGKIDILTGGFPCQPFSVAG 81 >gi|299142721|ref|ZP_07035850.1| C-5 cytosine-specific DNA methylase superfamily [Prevotella oris C735] gi|298575750|gb|EFI47627.1| C-5 cytosine-specific DNA methylase superfamily [Prevotella oris C735] Length = 398 Score = 41.6 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +++ LF GIG L +NV F EIN + FPN++ + +I Sbjct: 4 IIRHASLFSGIGAPEL-AALWLGWQNV---FHCEINEFCNTILNYWFPNSINYENIKTTN 59 Query: 61 -TQDIPDHDVLLAGFPCQPFSQAG 83 +Q D+L GFPCQPFS AG Sbjct: 60 FSQWQGKIDILTGGFPCQPFSSAG 83 >gi|296501658|ref|YP_003663358.1| type II restriction-modification system methylation subunit [Bacillus thuringiensis BMB171] gi|296322710|gb|ADH05638.1| Type II restriction-modification system methylation subunit [Bacillus thuringiensis BMB171] Length = 602 Score = 41.6 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 19/96 (19%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLIF 53 KI DLF G GG+ EQT E + EIN +V+TY N P Sbjct: 24 KIIDLFAGAGGLSNGFEQT---GRFEIVGAVEINKEAVETYICNHQNNKEIIIKPKNSEI 80 Query: 54 GDIAKIKTQDI-------PDHDVLLAGFPCQPFSQA 82 DI+ I + P V++ G PCQ FS A Sbjct: 81 SDISSIDFNEFIMQKGIDPSETVVIGGPPCQGFSNA 116 >gi|222053814|ref|YP_002536176.1| DNA-cytosine methyltransferase [Geobacter sp. FRC-32] gi|221563103|gb|ACM19075.1| DNA-cytosine methyltransferase [Geobacter sp. FRC-32] Length = 381 Score = 41.2 bits (95), Expect = 0.041, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 8/86 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAK 58 M + F G G R+ L + + EC F+++ +P +Y+ F + + D+AK Sbjct: 1 MKTFYEFFAGGGMARIGLGKGW-----ECVFANDFDPKKAISYRTYFRGNDHFVVEDVAK 55 Query: 59 IKT-QDIPDHDVLLAGFPCQPFSQAG 83 I+T Q + D+ A FPCQ S AG Sbjct: 56 IQTSQLLGTADLTWASFPCQDLSLAG 81 >gi|291549830|emb|CBL26092.1| DNA-methyltransferase (dcm) [Ruminococcus torques L2-14] Length = 410 Score = 41.2 bits (95), Expect = 0.043, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 +LF G GG+ L +E+ E E + + ++ + N PN +I DIA I D+ Sbjct: 81 ELFAGAGGLALGIEKA----GFETLGLVEFDKDAAESLKTNRPNWRVIHDDIANISCMDL 136 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 ++ D+L G PCQ FS AG Sbjct: 137 EEYFGIKKGELDLLSGGAPCQAFSYAG 163 >gi|284928852|ref|YP_003421374.1| DNA-methyltransferase Dcm [cyanobacterium UCYN-A] gi|284809311|gb|ADB95016.1| DNA-methyltransferase Dcm [cyanobacterium UCYN-A] Length = 422 Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDI 64 DLF G+GG+ L EQ + S EI+P + NFP T I DI+ I + I Sbjct: 10 DLFAGVGGMTLGFEQA----GFDVLGSVEIDPIHCAAHHYNFPFWTTICSDISIINAKTI 65 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 + DV+ G PCQ FS G Sbjct: 66 RNLSCIGNREIDVVFGGPPCQGFSLIG 92 >gi|254901064|ref|ZP_05260988.1| DNA-methyltransferase (cytosine-specific) [Listeria monocytogenes J0161] Length = 320 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++I +LF GIG R LE +++ EI P++V+ Y F N + D+ K Sbjct: 1 MVQILELFGGIGAPRKALENL--GVDIKSLDYVEILPFAVQAYNNIFSNDYVAQDVTKWN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+L+ G PCQ +S+ G Sbjct: 59 MS----VDLLIHGSPCQDWSKNG 77 >gi|293369629|ref|ZP_06616207.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f] gi|292635333|gb|EFF53847.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f] Length = 296 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 8/83 (9%) Query: 4 ITDLFCGIGGIRLDLEQ---TFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + +LF GIGG LE TF+ + SEI+ +++ ++ NFP G + I Sbjct: 3 LLELFSGIGGFSKGLEAAGYTFDK-----VYFSEIDKHAIANFKYNFPYAEHIGTVTNIG 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 I ++ G PCQ FS G Sbjct: 58 EVGIERPHIVTFGSPCQNFSAIG 80 >gi|53712640|ref|YP_098632.1| site-specific DNA-methyltransferase (cytosine-specific) [Bacteroides fragilis YCH46] gi|52215505|dbj|BAD48098.1| site-specific DNA-methyltransferase (cytosine-specific) [Bacteroides fragilis YCH46] Length = 296 Score = 41.2 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 8/83 (9%) Query: 4 ITDLFCGIGGIRLDLEQ---TFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + +LF GIGG LE TF+ + SEI+ +++ ++ NFP G + I Sbjct: 3 LLELFSGIGGFSKGLEAAGYTFDK-----VYFSEIDKHAIANFKYNFPYAEHIGTVTNIG 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 I ++ G PCQ FS G Sbjct: 58 EVGIERPHIVTFGSPCQNFSAIG 80 >gi|209523295|ref|ZP_03271851.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209496446|gb|EDZ96745.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 387 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 11/85 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDI 64 DLF G GG+ LE EC + + +++T+Q N P I GD+ +I T+ I Sbjct: 12 DLFSGAGGMSCGLEMA----GFECLLGVDFDKSAIQTFQNNHPQAETICGDLREISTEQI 67 Query: 65 PDH------DVLLAGFPCQPFSQAG 83 + +++ G PCQ FS G Sbjct: 68 RELIGDRHINLICGGPPCQGFSTIG 92 >gi|209546991|ref|YP_002278909.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538235|gb|ACI58169.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 355 Score = 41.2 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Query: 34 EINPYSVKTYQANFPNTLIFG-DIAKIKTQDI-PDHD--VLLAGFPCQPFSQA 82 E +P + TY AN P + G DIAK+ T D+ P H VL G PCQ FS + Sbjct: 29 ENHPSACLTYSANHPGATLLGTDIAKVATIDVGPRHQPLVLFGGPPCQGFSTS 81 >gi|328955052|ref|YP_004372385.1| DNA-cytosine methyltransferase [Coriobacterium glomerans PW2] gi|328455376|gb|AEB06570.1| DNA-cytosine methyltransferase [Coriobacterium glomerans PW2] Length = 353 Score = 41.2 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 6/79 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKTQDI 64 + F G G + L F R+V ++++I+ Y+AN P+ L GDI+++ D+ Sbjct: 10 EFFAGSGLVGCGLAPWF--RSV---WANDISERKAAVYRANLDPSVLHVGDISRVSGADL 64 Query: 65 PDHDVLLAGFPCQPFSQAG 83 P + A FPCQ S AG Sbjct: 65 PAASLSWASFPCQDLSLAG 83 >gi|145593130|ref|YP_001157427.1| DNA-cytosine methyltransferase [Salinispora tropica CNB-440] gi|145302467|gb|ABP53049.1| DNA-cytosine methyltransferase [Salinispora tropica CNB-440] Length = 652 Score = 41.2 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 17/88 (19%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI--------- 56 DLF G GG+ L L + +++ +P SV+T++ ++P + D+ Sbjct: 55 DLFSGAGGLSLGLTEA----GFRVVLAADRDPESVETHRHHYPGLTLDYDLGESANIRRI 110 Query: 57 -AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 A +K I ++L G PCQPFS+AG Sbjct: 111 AALVKEAGI---ELLTGGPPCQPFSRAG 135 >gi|77409601|ref|ZP_00786278.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae COH1] gi|77171795|gb|EAO74987.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae COH1] Length = 333 Score = 41.2 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +K +LF G GG+ L +E+ + E + + +T + N PN +I D+A I Sbjct: 1 MKSIELFAGAGGLALGIEKA----GFDTIGLVEFDSAASETLKYNRPNWNVIHDDVANIS 56 Query: 61 TQDIPDH--------DVLLAGFPCQPFSQAG 83 D+ ++ D+L G PCQ FS AG Sbjct: 57 KLDLEEYFLIKKGELDLLSGGAPCQSFSYAG 87 >gi|291571391|dbj|BAI93663.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39] Length = 390 Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 11/85 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDI 64 DLF G GG+ LE EC + + +++T+Q N P I GD+ +I T+ I Sbjct: 11 DLFSGAGGMSCGLEMA----GFECLLGVDFDKSAIQTFQNNHPQAETICGDLREISTEQI 66 Query: 65 PDH------DVLLAGFPCQPFSQAG 83 + +++ G PCQ FS G Sbjct: 67 RELIGDRHINLICGGPPCQGFSTIG 91 >gi|79835459|gb|ABB52089.1| Mod [Arthrospira platensis] Length = 390 Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 11/85 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDI 64 DLF G GG+ LE EC + + +++T+Q N P I GD+ +I T+ I Sbjct: 11 DLFSGAGGMSCGLEMA----GFECLLGVDFDKSAIQTFQNNHPQAETICGDLREISTEQI 66 Query: 65 PDH------DVLLAGFPCQPFSQAG 83 + +++ G PCQ FS G Sbjct: 67 RELIGDRHINLICGGPPCQGFSTIG 91 >gi|310815203|ref|YP_003963167.1| modification methylase XorII [Ketogulonicigenium vulgare Y25] gi|308753938|gb|ADO41867.1| modification methylase XorII [Ketogulonicigenium vulgare Y25] Length = 437 Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 DLF G GG+ L EQ + + EI+P ++ NFP+ +I + + +DI Sbjct: 8 DLFSGAGGMSLGFEQA----GFDVVAAVEIDPVHAAVHKFNFPDCAVIPRSVTDVSGEDI 63 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 DV+ G PCQ FS G Sbjct: 64 RAEAGIGDQTVDVVFGGAPCQGFSLIG 90 >gi|15894780|ref|NP_348129.1| DNA-methyltransferase (cytosine-specific), ortholog of BSP6I Bsubtilis [Clostridium acetobutylicum ATCC 824] gi|15024448|gb|AAK79469.1|AE007660_12 DNA-methyltransferase (cytosine-specific), ortholog of BSP6I Bsubtilis [Clostridium acetobutylicum ATCC 824] gi|325508918|gb|ADZ20554.1| DNA-methyltransferase (cytosine-specific) [Clostridium acetobutylicum EA 2018] Length = 415 Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 50/129 (38%), Gaps = 50/129 (38%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + LF G+GGI L +T +R + +++EI+ Y+ +TY+ NF + LI GDI KI Sbjct: 8 VGSLFAGVGGICLGF-KTAEYRGLGYNLIWANEIDEYAGETYRHNFDHNLIAGDIEKIVD 66 Query: 62 QDIPDH-----------------------------------------------DVLLAGF 74 +I DVL GF Sbjct: 67 LNIIQSEQNRYINIMNEVATDEERIKYKVLIEKCEEEKQIYREKQKQILSSKIDVLNGGF 126 Query: 75 PCQPFSQAG 83 PCQ FS AG Sbjct: 127 PCQAFSIAG 135 >gi|320120362|gb|EFE28316.2| DNA (cytosine-5-)-methyltransferase [Filifactor alocis ATCC 35896] Length = 363 Score = 41.2 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIG L + ++ ++SEI + + +FPN GDI KIK Sbjct: 4 IKLGSLFDGIGVFPLAASRC----HIVPVWASEIEKVPMSITKRHFPNMEHLGDITKIKG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +I ++ G PCQ S AG Sbjct: 60 GEITPVHIITFGSPCQNLSLAG 81 >gi|296139305|ref|YP_003646548.1| DNA-cytosine methyltransferase [Tsukamurella paurometabola DSM 20162] gi|296027439|gb|ADG78209.1| DNA-cytosine methyltransferase [Tsukamurella paurometabola DSM 20162] Length = 385 Score = 41.2 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 9/86 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAK 58 + + F GIG + LE+ +++ +S++I+P Y+ +F + I GD+A Sbjct: 14 RAAEFFAGIGLAGIGLEKA----DIKVAWSNDISPVKYALYEKHFGEREGHRYIVGDLAT 69 Query: 59 IK-TQDIPDHDVLLAGFPCQPFSQAG 83 ++ +QD D DV A FPC S AG Sbjct: 70 LEASQDPIDIDVAWASFPCTDLSVAG 95 >gi|67539812|ref|XP_663680.1| hypothetical protein AN6076.2 [Aspergillus nidulans FGSC A4] gi|40738861|gb|EAA58051.1| hypothetical protein AN6076.2 [Aspergillus nidulans FGSC A4] gi|259479739|tpe|CBF70236.1| TPA: SNF2 family helicase, putative (AFU_orthologue; AFUA_2G09120) [Aspergillus nidulans FGSC A4] Length = 2379 Score = 41.2 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 12/79 (15%) Query: 14 IRLDLEQTFNHR-NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT----------Q 62 ++ +L++ FN + + FS+EI PY + NF L+F D+A++K + Sbjct: 341 VKENLQKYFNRDLDFKHLFSAEIVPYKQAYIERNFRPRLLFRDVAELKDRVARTAYGSLE 400 Query: 63 DIPDH-DVLLAGFPCQPFS 80 +P + D+L+AGF C FS Sbjct: 401 KVPKNADMLIAGFSCVDFS 419 >gi|312114242|ref|YP_004011838.1| DNA-cytosine methyltransferase [Rhodomicrobium vannielii ATCC 17100] gi|311219371|gb|ADP70739.1| DNA-cytosine methyltransferase [Rhodomicrobium vannielii ATCC 17100] Length = 363 Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 10/83 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLFCG GG L F+ + + + ++ N I D+A++K ++ Sbjct: 24 VVDLFCGAGG----LSHGFHSEGFDIVAGIDTDETCRYAFEHNNDAPFIRRDVAQLKGRE 79 Query: 64 IPD------HDVLLAGFPCQPFS 80 I D H VL+ PCQPFS Sbjct: 80 IEDLFVPGRHRVLVGCAPCQPFS 102 >gi|42766604|gb|AAS45432.1| At5g25480 [Arabidopsis thaliana] Length = 176 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 3 KITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ + + GIGG+R L + VE F EIN + YQ NF + G+I + Sbjct: 16 QVLEFYSGIGGMRYSLMASGIVSEVVEAF---EINDSANDVYQHNFKHRPYQGNIQSLTA 72 Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83 D+ + D L PCQP+++ G Sbjct: 73 ADLDKYNADAWLLSPPCQPYTRQG 96 >gi|328913308|gb|AEB64904.1| putative DNA (Cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens LL3] Length = 254 Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K +LF GIGGI L E +E E P+ K NFP IF D + Sbjct: 1 MKSIELFAGIGGIALAAEWA----GIETVAFCEREPFCQKVLNKNFPGVPIFDDACAVNR 56 Query: 62 QDIPDHDV---------LLAGFPCQPFSQAG 83 Q + + V L G+PCQ S G Sbjct: 57 QLLEEKGVIEPGGTISILSGGYPCQGESVIG 87 >gi|322505075|emb|CAM39116.2| modification methylase-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 843 Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + G+I +I P HDVL GFPCQ F++AG Sbjct: 438 LVGNITEIPNAFFPTHDVLTGGFPCQSFAKAG 469 >gi|317500279|ref|ZP_07958506.1| cytosine-specific methyltransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|331087487|ref|ZP_08336423.1| hypothetical protein HMPREF1025_00006 [Lachnospiraceae bacterium 3_1_46FAA] gi|316898322|gb|EFV20366.1| cytosine-specific methyltransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|330410467|gb|EGG89898.1| hypothetical protein HMPREF1025_00006 [Lachnospiraceae bacterium 3_1_46FAA] Length = 410 Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 +LF G GG+ L +E+ E E + + ++ + N PN +I DIA I D+ Sbjct: 81 ELFAGAGGLALGIEKA----GFEPLGLIEFDKDAAESLKTNRPNWRVIHDDIANISCLDL 136 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 D+ D+L G PCQ FS AG Sbjct: 137 EDYFGIKKGELDLLSGGAPCQAFSYAG 163 >gi|154338798|ref|XP_001565621.1| modification methylase-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 843 Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + G+I +I P HDVL GFPCQ F++AG Sbjct: 438 LVGNITEIPNAFFPTHDVLTGGFPCQSFAKAG 469 >gi|46580156|ref|YP_010964.1| C-5 cytosine-specific DNA methylase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46449573|gb|AAS96223.1| C-5 cytosine-specific DNA methylase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|311233853|gb|ADP86707.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1] Length = 369 Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 18/92 (19%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------PNTLIFGDI 56 K DLFCG GG L + +E + E N Y+ TY+ NF P L GDI Sbjct: 12 KAVDLFCGAGGFSL----AARNLGIEVVAALENNHYAAATYRHNFIEGSRRPPLLFEGDI 67 Query: 57 AKIKTQDIPDH--------DVLLAGFPCQPFS 80 I + D+++ G PCQ FS Sbjct: 68 LAISPEAFMQAANLTPGGVDIIMGGPPCQGFS 99 >gi|194098495|ref|YP_002001557.1| DNA modification methylase [Neisseria gonorrhoeae NCCP11945] gi|239998889|ref|ZP_04718813.1| DNA modification methylase [Neisseria gonorrhoeae 35/02] gi|240115566|ref|ZP_04729628.1| DNA modification methylase [Neisseria gonorrhoeae PID18] gi|240125661|ref|ZP_04738547.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679] gi|254493672|ref|ZP_05106843.1| DNA modification methylase [Neisseria gonorrhoeae 1291] gi|260440624|ref|ZP_05794440.1| DNA modification methylase [Neisseria gonorrhoeae DGI2] gi|268594728|ref|ZP_06128895.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae 35/02] gi|268601236|ref|ZP_06135403.1| DNA modification methylase [Neisseria gonorrhoeae PID18] gi|268684247|ref|ZP_06151109.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679] gi|291043935|ref|ZP_06569651.1| DNA modification methylase [Neisseria gonorrhoeae DGI2] gi|193933785|gb|ACF29609.1| DNA modification methylase [Neisseria gonorrhoeae NCCP11945] gi|226512712|gb|EEH62057.1| DNA modification methylase [Neisseria gonorrhoeae 1291] gi|268548117|gb|EEZ43535.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae 35/02] gi|268585367|gb|EEZ50043.1| DNA modification methylase [Neisseria gonorrhoeae PID18] gi|268624531|gb|EEZ56931.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679] gi|291012398|gb|EFE04387.1| DNA modification methylase [Neisseria gonorrhoeae DGI2] gi|317164179|gb|ADV07720.1| DNA modification methylase [Neisseria gonorrhoeae TCDC-NG08107] Length = 312 Score = 41.2 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 ++ G GG L LE+ F+H + EI P + +T + N P+ +I GD+ + + Sbjct: 7 EICAGAGGQALGLERAGFSHVAL-----IEIEPSACQTLRLNRPDWNVIEGDVRLFQGEG 61 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D+L G PC PFS+AG Sbjct: 62 YDGIDLLAGGVPCPPFSKAG 81 >gi|74317828|ref|YP_315568.1| C-5 cytosine-specific DNA methylase [Thiobacillus denitrificans ATCC 25259] gi|74057323|gb|AAZ97763.1| C-5 cytosine-specific DNA methylase [Thiobacillus denitrificans ATCC 25259] Length = 382 Score = 41.2 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 7/85 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKI 59 M + F G G R L + +C F+++ +P +Y N+ + L GD+ + Sbjct: 1 MPSFYEFFAGGGMARAGLGAEW-----DCLFANDFDPKKAASYAVNWDGDELRVGDVGTL 55 Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83 D+P D+ A FPCQ S AG Sbjct: 56 TVPDLPGRADLAWASFPCQDLSLAG 80 >gi|400287|sp|P31033|MTM4_NEIGO RecName: Full=Modification methylase NgoMIV; Short=M.NgoMIV; AltName: Full=Cytosine-specific methyltransferase NgoMIV Length = 312 Score = 41.2 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 ++ G GG L LE+ F+H + EI P + +T + N P+ +I GD+ + + Sbjct: 7 EICAGAGGQALGLERAGFSHVAL-----IEIEPSACQTLRLNRPDWNVIEGDVRLFQGEG 61 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D+L G PC PFS+AG Sbjct: 62 YDGIDLLAGGVPCPPFSKAG 81 >gi|59801274|ref|YP_207986.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA 1090] gi|240014199|ref|ZP_04721112.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae DGI18] gi|240016634|ref|ZP_04723174.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA6140] gi|240080823|ref|ZP_04725366.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA19] gi|240112810|ref|ZP_04727300.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae MS11] gi|240117858|ref|ZP_04731920.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae PID1] gi|240121762|ref|ZP_04734724.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae PID24-1] gi|240123416|ref|ZP_04736372.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae PID332] gi|240128118|ref|ZP_04740779.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae SK-93-1035] gi|268596944|ref|ZP_06131111.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA19] gi|268598881|ref|ZP_06133048.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae MS11] gi|268603557|ref|ZP_06137724.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae PID1] gi|268682037|ref|ZP_06148899.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae PID332] gi|268686505|ref|ZP_06153367.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|293399137|ref|ZP_06643302.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|5051442|emb|CAB44950.1| DNA modification methylase [Neisseria gonorrhoeae] gi|5262959|emb|CAB45015.2| DNA modification methylase [Neisseria gonorrhoeae] gi|59718169|gb|AAW89574.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA 1090] gi|268550732|gb|EEZ45751.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA19] gi|268583012|gb|EEZ47688.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae MS11] gi|268587688|gb|EEZ52364.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae PID1] gi|268622321|gb|EEZ54721.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae PID332] gi|268626789|gb|EEZ59189.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|291610551|gb|EFF39661.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] Length = 312 Score = 41.2 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 ++ G GG L LE+ F+H + EI P + +T + N P+ +I GD+ + + Sbjct: 7 EICAGAGGQALGLERAGFSHVAL-----IEIEPSACQTLRLNRPDWNVIEGDVRLFQGEG 61 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D+L G PC PFS+AG Sbjct: 62 YDGIDLLAGGVPCPPFSKAG 81 >gi|110800293|ref|YP_695463.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC 13124] gi|110674940|gb|ABG83927.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC 13124] Length = 407 Score = 41.2 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 12/90 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNT-LIFGDIA 57 + +LF G+GG L L + + E ++++ P ++ + Y +FP T + DIA Sbjct: 7 VCELFAGVGGFHLGLSKA--SADWEVLWANQWEPSRKVQHAFECYAKHFPKTNAVNEDIA 64 Query: 58 KIKTQ----DIPDHDVLLAGFPCQPFSQAG 83 + +P +++L+ GFPCQ +S A Sbjct: 65 LVNENPEAFGLPKYNLLVGGFPCQDYSVAA 94 >gi|284050355|ref|ZP_06380565.1| site-specific DNA-methyltransferase [Arthrospira platensis str. Paraca] Length = 371 Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 11/84 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + D F G GG L + H + EI+ ++ +T+Q N PN LI GDI I + Sbjct: 1 MLDTFAGAGGFSLGFQWAGAH----IIGAIEIDEWAGETFQFNHPNAHLIKGDIKGITDE 56 Query: 63 DIPDH------DVLLAGFPCQPFS 80 I D ++L G PCQ FS Sbjct: 57 QILDTFGEIKPHIILGGIPCQGFS 80 >gi|20068992|gb|AAM09644.1|AF458984_2 m6 adenine and m5 cytosine DNA methyltransferase [Acinetobacter lwoffii] Length = 952 Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 20/89 (22%) Query: 6 DLFCGIGGI-----RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 DLF G GG+ + L+ F + +CF S+ I +++AN P T +I+GDI++ Sbjct: 731 DLFAGAGGMSQGMFQAGLKPIFAN---DCFLSACI------SHKANHPETDVIYGDISEA 781 Query: 60 KT-QDIPDH----DVLLAGFPCQPFSQAG 83 T Q I + D+L G PCQ FSQAG Sbjct: 782 HTKQKIYQYANKIDILCGGPPCQGFSQAG 810 >gi|262118158|ref|YP_003275928.1| C-5 cytosine-specific DNA methylase [Gordonia bronchialis DSM 43247] gi|262088068|gb|ACY24035.1| C-5 cytosine-specific DNA methylase [Gordonia bronchialis DSM 43247] Length = 652 Score = 41.2 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 11/84 (13%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGDI-AK 58 DLF G GG+ L +E+ ++ N Y V+ ++AN P+ LI ++ A Sbjct: 28 DLFSGFGGLTLGIEKA----GFTTILAANHNQYKVEVHEANHPHVQHWIADLINPEVPAY 83 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQA 82 +D+P D+L+AG C SQA Sbjct: 84 HSVRDLPAADLLVAGVTCTNHSQA 107 >gi|19718332|ref|NP_604405.1| plasmid encoded methyltransferase Pem [Salmonella enteritidis] gi|19526586|gb|AAL87019.1| plasmid encoded methyltransferase Pem [Salmonella enterica subsp. enterica serovar Enteritidis] Length = 382 Score = 41.2 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 ++ ++F G GG+ LE F H E+N ++ + + NF +F GDI Sbjct: 1 MRSLEIFSGAGGLAKGLELAGFQHVGF-----VELNKHACDSLRLNFDEEKVFQGDIKNY 55 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 I D++ G PCQPFS G Sbjct: 56 DLSSIDKIDIVAGGPPCQPFSLGG 79 >gi|148826164|ref|YP_001290917.1| modification methylase [Haemophilus influenzae PittEE] gi|148716324|gb|ABQ98534.1| modification methylase [Haemophilus influenzae PittEE] gi|162532590|gb|ABY16693.1| probable methylase [Haemophilus influenzae] gi|309973308|gb|ADO96509.1| Probable cytosine-specific DNA methyltransferase [Haemophilus influenzae R2846] Length = 409 Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Query: 2 LKITDLFCGIGGIRLDLEQ-TFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAK 58 +++ +F GIG I +++ NH E F+ +I+P+ K+Y AN+ DI Sbjct: 35 IRLATVFSGIGAIEQAMKRLKLNH---EIIFAGDIDPHVKKSYLANYQLSEEHWHSDITT 91 Query: 59 IKTQDIPDH-DVLLAGFPCQPFSQAG 83 + D+L+ G PCQ FS G Sbjct: 92 FDATPYREQIDLLVGGSPCQAFSMVG 117 >gi|326772743|ref|ZP_08232027.1| modification methylase XorII [Actinomyces viscosus C505] gi|326637375|gb|EGE38277.1| modification methylase XorII [Actinomyces viscosus C505] Length = 364 Score = 40.8 bits (94), Expect = 0.054, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--I 59 +++ DLF G GG+ T + R + E++P + +Y+A FP T ++ + + Sbjct: 6 IRVLDLFAGAGGLTAGF-HTASSR-FRSIAAVEMDPEAAASYRATFPKTEVYAGAIQDWL 63 Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83 IP DV++ G PCQ FS G Sbjct: 64 AEGTIPTGVDVVVGGPPCQGFSTLG 88 >gi|238493629|ref|XP_002378051.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] gi|220696545|gb|EED52887.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] Length = 2055 Score = 40.8 bits (94), Expect = 0.054, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 18/89 (20%) Query: 4 ITDLFCGIGGIRLDLEQTFNHR-NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61 +TD+F +DL + FN FS+EI PY + NF L+F D+ ++K Sbjct: 144 LTDMF------SIDLRKHFNRDFKFRHLFSAEIVPYKQRYIDNNFHPRLLFRDVTQLKDR 197 Query: 62 ---------QDIP-DHDVLLAGFPCQPFS 80 + +P + D+L+AGF C FS Sbjct: 198 VAQTAYGSLEKVPRNPDMLIAGFSCVDFS 226 >gi|312200730|ref|YP_004020791.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c] gi|311232066|gb|ADP84921.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c] Length = 464 Score = 40.8 bits (94), Expect = 0.054, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 10/85 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIA---- 57 K+ DLFCG GG L + F E +++ +P + TY+ NF + GD+ Sbjct: 34 KLVDLFCGAGG----LSEGFRRVGFEVVAAADHDPDACATYERNFARAEVLCGDLRLPAL 89 Query: 58 KIKTQDI-PDHDVLLAGFPCQPFSQ 81 + + D+ D+++ G PCQ +SQ Sbjct: 90 RERLVDLAAGADMIVGGPPCQAYSQ 114 >gi|188991808|ref|YP_001903818.1| hypothetical protein xccb100_2413 [Xanthomonas campestris pv. campestris str. B100] gi|167733568|emb|CAP51773.1| hypothetical protein predicted by Glimmer/Critica [Xanthomonas campestris pv. campestris] Length = 271 Score = 40.8 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQA 82 +E + +EI P+ ++P+ GD+ I Q +P D+L+ G PCQ FS A Sbjct: 30 IEAAWFAEIEPFPSAVLAHHYPHVPNLGDMTMIARQVHAGTVPAPDILVGGTPCQSFSVA 89 Query: 83 G 83 G Sbjct: 90 G 90 >gi|315636653|ref|ZP_07891886.1| modification methylase Eco47II [Arcobacter butzleri JV22] gi|315479079|gb|EFU69779.1| modification methylase Eco47II [Arcobacter butzleri JV22] Length = 411 Score = 40.8 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83 +E +EI+ Y+V+T + N P+ I D++KI + D+L GFPCQ FS AG Sbjct: 94 IEHILLNEIDKYAVQTLKRNRPHWKIEHSDVSKIDFTSYKNKIDLLTGGFPCQAFSYAG 152 >gi|300118609|ref|ZP_07056347.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus SJ1] gi|298723998|gb|EFI64702.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus SJ1] Length = 602 Score = 40.8 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 19/96 (19%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLIF 53 KI DLF G GG+ EQT E + EIN +V TY N P Sbjct: 24 KIIDLFAGAGGLSNGFEQT---GRFEIVGAVEINKEAVATYICNHQNNKDIIIKPKNSEI 80 Query: 54 GDIAKIKTQDI-------PDHDVLLAGFPCQPFSQA 82 DI+ I + P V++ G PCQ FS A Sbjct: 81 SDISSIDFNEFITQKGIDPSETVVIGGPPCQGFSNA 116 >gi|218128915|ref|ZP_03457719.1| hypothetical protein BACEGG_00487 [Bacteroides eggerthii DSM 20697] gi|217988878|gb|EEC55195.1| hypothetical protein BACEGG_00487 [Bacteroides eggerthii DSM 20697] Length = 361 Score = 40.8 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ DLFCGIGG+ ++ + ++ +++ + Y+ N IF DI ++ Sbjct: 16 IEVVDLFCGIGGLSYGMKS----KGLKIKAGFDLDWTCLYAYETNNEAKFIFKDIRTVQK 71 Query: 62 QD-IPDHD-----VLLAGFPCQPFS 80 +D IP + VL PCQPFS Sbjct: 72 EDIIPFYSKKSIKVLAGCAPCQPFS 96 >gi|254804928|ref|YP_003083149.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|254668470|emb|CBA05754.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] Length = 312 Score = 40.8 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 ++ G GG L LE+ F+H + EI P + +T + N P+ +I GD+ + + Sbjct: 7 EICAGAGGQALGLERAGFSHVAL-----IEIEPSACQTLRLNRPDWNVIEGDVRLFQGKG 61 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D+L G PC PFS+AG Sbjct: 62 YDGIDLLAGGVPCPPFSKAG 81 >gi|309790719|ref|ZP_07685269.1| site-specific DNA-methyltransferase [Oscillochloris trichoides DG6] gi|308227250|gb|EFO80928.1| site-specific DNA-methyltransferase [Oscillochloris trichoides DG6] Length = 368 Score = 40.8 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 10/81 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLFCG+GG L + + +I+PY Y+ N T I D+A I ++ Sbjct: 21 DLFCGVGG----LTHGLIRQGLHITHGIDIDPYCRFPYENNNNATFIESDVANISGSELE 76 Query: 66 D-----HDVLLAG-FPCQPFS 80 + LLAG PCQPFS Sbjct: 77 NILGDAQLRLLAGCAPCQPFS 97 >gi|304311589|ref|YP_003811187.1| C-5 cytosine-specific DNA methylase [gamma proteobacterium HdN1] gi|301797322|emb|CBL45542.1| C-5 cytosine-specific DNA methylase [gamma proteobacterium HdN1] Length = 387 Score = 40.8 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKI 59 +K ++F G GG+ LE + F H E N ++ + NF + FGDI Sbjct: 1 MKSLEIFSGAGGLAKGLELSGFKHAAF-----VEYNKHACASLSENFDRKKVFFGDIQDF 55 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + + DV+ G PCQPFS G Sbjct: 56 DLTVLDNIDVVAGGPPCQPFSLGG 79 >gi|304389869|ref|ZP_07371828.1| possible DNA-cytosine methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327045|gb|EFL94284.1| possible DNA-cytosine methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 503 Score = 40.8 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L + ++ ++SE++P++ + + N P GDI + Sbjct: 4 LTLGSLFDGSGGFPLAAKMV----GIKPMWASEVDPFAFRVTKKNLPEVRHVGDINLLDG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + DV+ G PCQ S AG Sbjct: 60 GRLQPVDVITFGSPCQDLSIAG 81 >gi|126657178|ref|ZP_01728344.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. CCY0110] gi|126621449|gb|EAZ92160.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. CCY0110] Length = 433 Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDI 64 DLF G+GG+ L EQ + S EI+P + NFP T I + KI I Sbjct: 10 DLFAGVGGMTLGFEQA----GFDVLASVEIDPIHCSIHHYNFPFWTTICTSVTKITANQI 65 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 + DV+ G PCQ FS G Sbjct: 66 RELSKIKNKPIDVVFGGPPCQGFSLMG 92 >gi|294788934|ref|ZP_06754174.1| modification methylase HphIA [Simonsiella muelleri ATCC 29453] gi|294483036|gb|EFG30723.1| modification methylase HphIA [Simonsiella muelleri ATCC 29453] Length = 328 Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 L DLF G GG L F+ S E+ +TY+ NFP + D+ + Sbjct: 3 LTYIDLFSGAGGFSLG----FDRAGFRQLLSVELEKTYCETYRTNFPKHHVLQTDLTTLS 58 Query: 61 TQDIPDH------DVLLAGFPCQPFSQAG 83 + I + DV++ G PCQ FS AG Sbjct: 59 NEKILNELNGQAVDVVIGGPPCQGFSMAG 87 >gi|254933776|ref|ZP_05267135.1| DNA-cytosine methyltransferase [Listeria monocytogenes HPB2262] gi|293585336|gb|EFF97368.1| DNA-cytosine methyltransferase [Listeria monocytogenes HPB2262] Length = 325 Score = 40.8 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++I +LF GIG R LE +++ EI P++V+ Y F N + D+ K Sbjct: 1 MVQILELFGGIGAPRKALENL--GVDIKSLDYVEILPFAVQAYNNIFSNDYVPQDVTKWN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+L+ G PCQ +S+ G Sbjct: 59 MS----VDLLIHGSPCQDWSKNG 77 >gi|148658198|ref|YP_001278403.1| DNA-cytosine methyltransferase [Roseiflexus sp. RS-1] gi|148570308|gb|ABQ92453.1| DNA-cytosine methyltransferase [Roseiflexus sp. RS-1] Length = 395 Score = 40.8 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 L + F G G R L R C F+++I+ + YQ NF ++ DI I Sbjct: 4 LTFYEFFAGGGLARFGL-----GRQWTCLFANDIDEKKAEVYQRNFSGAPEMVVEDIRHI 58 Query: 60 KTQDIPDHDVLL-AGFPCQPFSQAG 83 T +P L A FPCQ S AG Sbjct: 59 TTAMLPGRATLAWASFPCQDLSLAG 83 >gi|332310450|gb|EGJ23545.1| DNA-methyltransferase (Dcm) [Listeria monocytogenes str. Scott A] Length = 325 Score = 40.8 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++I +LF GIG R LE +++ EI P++V+ Y F N + D+ K Sbjct: 1 MVQILELFGGIGAPRKALENL--GVDIKSLDYVEILPFAVQAYNNIFSNDYVPQDVTKWN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+L+ G PCQ +S+ G Sbjct: 59 MS----VDLLIHGSPCQDWSKNG 77 >gi|240142441|ref|YP_002966951.1| Site-specific DNA-methyltransferase [Methylobacterium extorquens AM1] gi|240012385|gb|ACS43610.1| Site-specific DNA-methyltransferase [Methylobacterium extorquens AM1] Length = 463 Score = 40.8 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 10/86 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLF G GG L F S EI+P + T+ ANFP + F D + Sbjct: 13 VLDLFSGCGGFSLG----FQAAGFRIAGSVEIDPSARATHAANFPEAVHFDDATTADPAE 68 Query: 64 I------PDHDVLLAGFPCQPFSQAG 83 + VL+ G PCQ +++ G Sbjct: 69 VGACLAGAPFTVLVGGPPCQAYARVG 94 >gi|237726505|ref|ZP_04556986.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. D4] gi|229435031|gb|EEO45108.1| C-5 cytosine-specific DNA methylase [Bacteroides dorei 5_1_36/D4] Length = 356 Score = 40.8 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ DLFCGIGG+ ++ + ++ +++ + Y+ N IF DI ++ Sbjct: 11 IEVVDLFCGIGGLSYGMKS----KGLKIRAGFDLDQTCLYAYETNNEAKFIFKDIRTVRK 66 Query: 62 QD-IPDHD-----VLLAGFPCQPFS 80 ++ IP + VL PCQPFS Sbjct: 67 EEIIPFYSKKSIKVLAGCAPCQPFS 91 >gi|169834887|ref|YP_001715830.1| modification methylase [Clostridium botulinum A3 str. Loch Maree] gi|169408994|gb|ACA57404.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum A3 str. Loch Maree] Length = 284 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 4/80 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+ F G GG+ L L Q + S EI+ T + NF + + DI+KI Sbjct: 1 MITAKSYFSGAGGMDLGLVQA----GINITHSYEIDSTCCNTLRTNFTHEIHQEDISKIT 56 Query: 61 TQDIPDHDVLLAGFPCQPFS 80 D D D+ + FPC +S Sbjct: 57 VLDQQDADIYVGTFPCTKYS 76 >gi|119719333|ref|YP_919828.1| DNA-cytosine methyltransferase [Thermofilum pendens Hrk 5] gi|119524453|gb|ABL77825.1| DNA-cytosine methyltransferase [Thermofilum pendens Hrk 5] Length = 320 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 14/89 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 L + DLF G GG + F + E++P + + ++ NFP +F D+ ++ Sbjct: 5 LTVLDLFAGAGG----FSRGFAEEGFSIVGAVEVDPLAAEAFRLNFPGARVFEEDVREVH 60 Query: 61 TQDI-------PDHDVLLAGFPCQPFSQA 82 ++DI P V++ G PC+ +S+A Sbjct: 61 SRDILLGLGFRP--RVIIGGPPCEAYSRA 87 >gi|153874403|ref|ZP_02002639.1| Modification methylase [Beggiatoa sp. PS] gi|152069134|gb|EDN67362.1| Modification methylase [Beggiatoa sp. PS] Length = 92 Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+K+ DLF GIGG+ L F + + + + +++ YQANF + + D++++ Sbjct: 1 MMKVIDLFAGIGGLSL----GFQNAGFKIVAAIDNWQAAMENYQANFNHDALLIDLSQMS 56 Query: 61 T-QDIPDH--DVLLAGFPCQPFSQAG 83 + D+ D+++ G PCQ F G Sbjct: 57 DYKKFKDYQPDIIIGGPPCQDFPVPG 82 >gi|284161497|ref|YP_003400120.1| DNA-cytosine methyltransferase [Archaeoglobus profundus DSM 5631] gi|284011494|gb|ADB57447.1| DNA-cytosine methyltransferase [Archaeoglobus profundus DSM 5631] Length = 310 Score = 40.8 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 9/84 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + D+F G GG + F E + E +TY+ NFP +I D+ +++ Sbjct: 1 MNVVDVFAGCGG----FSRGFKEEGFELVAAIENFKPVAETYKTNFPEVEVIVKDVKEVR 56 Query: 61 TQDIP----DHDVLLAGFPCQPFS 80 D+ D DVL+ PC+PF+ Sbjct: 57 GFDVERICGDVDVLIGSPPCEPFT 80 >gi|109947738|ref|YP_664966.1| site-specific DNA methyltransferase [Helicobacter acinonychis str. Sheeba] gi|109714959|emb|CAJ99967.1| site-specific DNA methyltransferase [Helicobacter acinonychis str. Sheeba] Length = 327 Score = 40.8 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L EQ + ++E + TY+ N NT L+ DI ++ Sbjct: 1 MNLLSLFAGAGGLDLGFEQA----GFKIVIANEYDKNITPTYRLNHKNTQLLEKDIKNLQ 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 T +I D ++ G PCQ +S+AG Sbjct: 57 TNEINFSVDGIIGGPPCQSWSEAG 80 >gi|58580230|ref|YP_199246.1| modification methylase XorII [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424824|gb|AAW73861.1| Modification methylase XorII [Xanthomonas oryzae pv. oryzae KACC10331] Length = 442 Score = 40.8 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 19/90 (21%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--------IFGD-- 55 DLF G GG+ L EQ + + +I+P ++ NFP + GD Sbjct: 26 DLFAGAGGLSLGFEQA----GFDLVAAVDIDPIHCAAHKFNFPKCATVCKSVVDVTGDEL 81 Query: 56 --IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 IA I +DI D+++ G PCQ FS G Sbjct: 82 RRIAGIGKRDI---DIVIGGAPCQGFSLIG 108 >gi|62297515|sp|P52311|MTX2_XANOR RecName: Full=Modification methylase XorII; Short=M.XorII; AltName: Full=Cytosine-specific methyltransferase XorII Length = 424 Score = 40.8 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 19/90 (21%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--------IFGD-- 55 DLF G GG+ L EQ + + +I+P ++ NFP + GD Sbjct: 8 DLFAGAGGLSLGFEQA----GFDLVAAVDIDPIHCAAHKFNFPKCATVCKSVVDVTGDEL 63 Query: 56 --IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 IA I +DI D+++ G PCQ FS G Sbjct: 64 RRIAGIGKRDI---DIVIGGAPCQGFSLIG 90 >gi|225158172|ref|ZP_03725067.1| DNA methyltransferase [Opitutaceae bacterium TAV2] gi|224802676|gb|EEG20930.1| DNA methyltransferase [Opitutaceae bacterium TAV2] Length = 414 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 4/77 (5%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGG L F + + EI+ + FP F DI ++ + Sbjct: 20 LFAGIGGFDLG----FKRAGMNDCWQIEIDENCRDLLRRRFPTCEKFADIREVDVSTLAP 75 Query: 67 HDVLLAGFPCQPFSQAG 83 DV+ GFPCQ S AG Sbjct: 76 VDVICGGFPCQDLSVAG 92 >gi|47207937|emb|CAF91437.1| unnamed protein product [Tetraodon nigroviridis] Length = 405 Score = 40.4 bits (93), Expect = 0.070, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 7/86 (8%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 +++ +L+ GIGG+ L+++ H+ V + +IN + Y+ NFP+T L+ I I Sbjct: 1 MRVLELYSGIGGMHYALKESEVCHQVVA---AVDINTTANDVYRHNFPSTALLNKTIEGI 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++ DV+L PCQPF++ G Sbjct: 58 TLEEFNQLSFDVILMSPPCQPFTRIG 83 >gi|331091845|ref|ZP_08340677.1| hypothetical protein HMPREF9477_01320 [Lachnospiraceae bacterium 2_1_46FAA] gi|330402744|gb|EGG82311.1| hypothetical protein HMPREF9477_01320 [Lachnospiraceae bacterium 2_1_46FAA] Length = 410 Score = 40.4 bits (93), Expect = 0.072, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 +LF G GG+ L +E+ E E + + ++ + N PN +I DIA I D+ Sbjct: 81 ELFAGAGGLALGIEKA----GFEPVGLIEFDKDAAESLKTNRPNWRVIHDDIANISCLDL 136 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 D+ D+L G PCQ FS AG Sbjct: 137 EDYFGIKKGELDLLSGGAPCQAFSYAG 163 >gi|186683211|ref|YP_001866407.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] gi|14594714|gb|AAK68647.1| cytosine-specific DNA methyltransferase [Nostoc punctiforme PCC 73102] gi|186465663|gb|ACC81464.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] Length = 421 Score = 40.4 bits (93), Expect = 0.072, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 DLF G GG+ L EQ + S EI+P T++ NFP +++ + ++I Sbjct: 14 DLFAGAGGMTLGFEQA----GFDVLASVEIDPIHCATHEFNFPYCSVLCQSVVDTTGEEI 69 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 DV++ G PCQ FS G Sbjct: 70 RSRSKIGDREIDVVICGSPCQGFSLIG 96 >gi|212716999|ref|ZP_03325127.1| hypothetical protein BIFCAT_01946 [Bifidobacterium catenulatum DSM 16992] gi|212660059|gb|EEB20634.1| hypothetical protein BIFCAT_01946 [Bifidobacterium catenulatum DSM 16992] Length = 392 Score = 40.4 bits (93), Expect = 0.073, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 11/84 (13%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIAKIKT 61 + F GIG RL LE++ + +S++I+ + Y+ NF +T L+ GD++++ Sbjct: 19 EFFAGIGLARLGLEES----GFQVEWSNDIDSAKCEMYRNNFTDTPGHTLVEGDMSELSG 74 Query: 62 QDIPDHDVLLA--GFPCQPFSQAG 83 D+P HD +A PC S AG Sbjct: 75 DDLP-HDASIAWGSSPCTDLSLAG 97 >gi|322382626|ref|ZP_08056496.1| DNA-methyltransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153407|gb|EFX45824.1| DNA-methyltransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 345 Score = 40.4 bits (93), Expect = 0.074, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 15/87 (17%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGGI DL + F E P V + ++P+ I+ D+ + T+++ + Sbjct: 6 LFSGIGGI--DLAAKWAGIETVAFCEKESFPQQV--LRKHWPDIPIYDDVCAL-TREVLE 60 Query: 67 HDVLL----------AGFPCQPFSQAG 83 D ++ AG+PCQPFS AG Sbjct: 61 QDGIITRNRTIDLISAGYPCQPFSNAG 87 >gi|167461751|ref|ZP_02326840.1| site-specific DNA-methyltransferase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 350 Score = 40.4 bits (93), Expect = 0.074, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 15/87 (17%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGGI DL + F E P V + ++P+ I+ D+ + T+++ + Sbjct: 6 LFSGIGGI--DLAAKWAGIETVAFCEKESFPQQV--LRKHWPDIPIYDDVCAL-TREVLE 60 Query: 67 HDVLL----------AGFPCQPFSQAG 83 D ++ AG+PCQPFS AG Sbjct: 61 QDGIITRNRTIDLISAGYPCQPFSNAG 87 >gi|78047842|ref|YP_364017.1| cytosine-specific DNA methyltransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036272|emb|CAJ23963.1| cytosine-specific DNA methyltransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 512 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQA 82 +E + +EI P+ ++P+ GD+ I Q +P D+L+ G PCQ FS A Sbjct: 30 LEAAWFAEIEPFPSAVLAHHYPHVPNLGDMTTIARQVHAGTVPAPDILVGGTPCQSFSVA 89 Query: 83 G 83 G Sbjct: 90 G 90 >gi|112983066|ref|NP_001036934.1| DNA cytosine-5 methyltransferase [Bombyx mori] gi|54888741|dbj|BAD67190.1| DNA cytosine-5 methyltransferase [Bombyx mori] Length = 336 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%) Query: 3 KITDLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +I +L+ GIGG+ E T + V +IN + Y+ NFP TL+F +I + Sbjct: 8 RILELYSGIGGMHCAWNESTIKGKVVAAI---DINTVANDVYKYNFPETLLFTKNIQSLT 64 Query: 61 TQDIPDH--DVLLAGFPCQPFSQAG 83 +I + D +L PCQPF++ G Sbjct: 65 PIEIEKYKIDTVLMSPPCQPFTRNG 89 >gi|324993630|gb|EGC25549.1| modification methylase HgiDII [Streptococcus sanguinis SK405] gi|324995058|gb|EGC26971.1| modification methylase HgiDII [Streptococcus sanguinis SK678] gi|327462899|gb|EGF09220.1| modification methylase HgiDII [Streptococcus sanguinis SK1] Length = 352 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 11/82 (13%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI- 64 DLFCG+GG+ ++Q + +I+ S Y+ N I DI +I+ +I Sbjct: 7 DLFCGVGGLTYGVQQA----GINVVAGYDIDDKSKFAYEYNNDAKFILKDIKEIEDDEIL 62 Query: 65 ------PDHDVLLAGFPCQPFS 80 D +L+ PCQPFS Sbjct: 63 ALYPKDTDIKILIGCAPCQPFS 84 >gi|332706962|ref|ZP_08427022.1| DNA-methyltransferase [Lyngbya majuscula 3L] gi|332354227|gb|EGJ33707.1| DNA-methyltransferase [Lyngbya majuscula 3L] Length = 450 Score = 40.4 bits (93), Expect = 0.078, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 13/86 (15%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI---------FGDIA 57 LFCG GG L +Q ++++ + +V+TY+ NF +L FG + Sbjct: 33 LFCGAGGCSLGFKQA----GYSIVYANDKDAAAVETYRINFTESLCSNEDIDNLDFGQVL 88 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + D+L+ G PCQ FS AG Sbjct: 89 SEIVMKPGELDILIGGPPCQGFSTAG 114 >gi|289177801|gb|ADC85047.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp. lactis BB-12] Length = 513 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 13/86 (15%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD--- 63 F G GG+ L E+ + C E N T N P+ + GDI KI + Sbjct: 139 FFSGAGGLDLGFERAGISAALYC----ENNRECRMTLHRNRPDVALLGDITKISADEVRR 194 Query: 64 ---IP---DHDVLLAGFPCQPFSQAG 83 IP + DV+ G PCQ FS AG Sbjct: 195 MARIPQGREIDVMFGGPPCQAFSTAG 220 >gi|240142254|ref|YP_002966764.1| putative site-specific DNA-methyltransferase [Methylobacterium extorquens AM1] gi|240012198|gb|ACS43423.1| putative site-specific DNA-methyltransferase [Methylobacterium extorquens AM1] Length = 384 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF G G + LE + EC E++ + + + FP + D++ + Sbjct: 1 MRTIGLFSGSGSLEAGLEAGGH----ECLMLCEVSEPARRVLASRFPGVPVAHDVSDLAR 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +P D+L AGFPCQ S +G Sbjct: 57 --LPSCDLLAAGFPCQDLSLSG 76 >gi|218134306|ref|ZP_03463110.1| hypothetical protein BACPEC_02199 [Bacteroides pectinophilus ATCC 43243] gi|217991681|gb|EEC57687.1| hypothetical protein BACPEC_02199 [Bacteroides pectinophilus ATCC 43243] Length = 622 Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 11/91 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIA-- 57 M +I DLF G GG+ +E+ H E + N +++T++ N P+T + GDI Sbjct: 269 MFRILDLFSGAGGMSYGMEKN-EHFTTEVAL--DFNEKALQTFKHNMPDTETVCGDITDE 325 Query: 58 KIKTQDI-----PDHDVLLAGFPCQPFSQAG 83 KIK + I ++++ G PCQ FS G Sbjct: 326 KIKAKVIELCKAKKVNMIIGGPPCQGFSLKG 356 >gi|183602700|ref|ZP_02964064.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis HN019] gi|219682526|ref|YP_002468909.1| modification methylase SinI [Bifidobacterium animalis subsp. lactis AD011] gi|241190098|ref|YP_002967492.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195504|ref|YP_002969059.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218118|gb|EDT88765.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis HN019] gi|219620176|gb|ACL28333.1| modification methylase SinI [Bifidobacterium animalis subsp. lactis AD011] gi|240248490|gb|ACS45430.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250058|gb|ACS46997.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793085|gb|ADG32620.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis V9] Length = 453 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 13/86 (15%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD--- 63 F G GG+ L E+ + C E N T N P+ + GDI KI + Sbjct: 79 FFSGAGGLDLGFERAGISAALYC----ENNRECRMTLHRNRPDVALLGDITKISADEVRR 134 Query: 64 ---IP---DHDVLLAGFPCQPFSQAG 83 IP + DV+ G PCQ FS AG Sbjct: 135 MARIPQGREIDVMFGGPPCQAFSTAG 160 >gi|332711623|ref|ZP_08431554.1| DNA-methyltransferase [Lyngbya majuscula 3L] gi|332349601|gb|EGJ29210.1| DNA-methyltransferase [Lyngbya majuscula 3L] Length = 427 Score = 40.4 bits (93), Expect = 0.082, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++ +LF G GG+ L E + EI+ V T + N P+ +I DIA + Sbjct: 81 FRVIELFAGCGGMALGFENA----GLTTKLLVEIDKDCVNTLKLNRPSWEIIPEDIANVD 136 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 + D+ D++ G PCQ FS AG Sbjct: 137 FTNYKDNVDIVAGGVPCQAFSYAG 160 >gi|283783021|ref|YP_003373775.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05] gi|283441534|gb|ADB14000.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05] Length = 357 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 10/86 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + DLF G+GG+ L E+ ++E + Y N T ++ GDI + Sbjct: 5 VIDLFSGVGGLSLGFEE----EGFSVLLANEYDESIANAYMKNHKTTKMVVGDITSLDLD 60 Query: 63 DI-----PDHDVLLAGFPCQPFSQAG 83 + DV++ G PCQ FSQ G Sbjct: 61 AVFGTYKNKIDVIIGGPPCQGFSQKG 86 >gi|187923153|ref|YP_001894795.1| DNA-cytosine methyltransferase [Burkholderia phytofirmans PsJN] gi|187714347|gb|ACD15571.1| DNA-cytosine methyltransferase [Burkholderia phytofirmans PsJN] Length = 317 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 9/85 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAK 58 M LF G GG L FN +++I PY+ Y N P T G +A Sbjct: 1 MPTAVSLFTGCGGSDAGLVSLGFN-----VLMANDILPYARDVYLHNHPETDYRLGSVAD 55 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 IK+ P ++L+ +PCQ FSQ G Sbjct: 56 IKS--FPKAELLVGCYPCQGFSQGG 78 >gi|291544930|emb|CBL18039.1| Site-specific DNA methylase [Ruminococcus sp. 18P13] Length = 362 Score = 40.4 bits (93), Expect = 0.084, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GI L L++ VEC+ + EI+ Y+V + NFP + G++ Sbjct: 1 MKVLSLFDGISCGMLALQRA--GIPVECYDAFEIDKYAVTVSKRNFPVIVHHGNVYDGDF 58 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 +D+LL G PC +S A Sbjct: 59 TQFKGYDLLLGGSPCTYWSIA 79 >gi|257069715|ref|YP_003155970.1| DNA-methyltransferase Dcm [Brachybacterium faecium DSM 4810] gi|256560533|gb|ACU86380.1| DNA-methyltransferase Dcm [Brachybacterium faecium DSM 4810] Length = 431 Score = 40.4 bits (93), Expect = 0.084, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI----- 59 DLF G GG+ L LEQ E S E +P ++ NFP F D++K+ Sbjct: 12 DLFAGAGGLSLGLEQA----GFEIAASVEYDPIHAAVHEFNFPYGKTFASDVSKVTGEQI 67 Query: 60 -KTQDIPDHDVLL--AGFPCQPFSQAG 83 + +I D ++ L G PCQ S G Sbjct: 68 RRESEIGDREIHLVAGGPPCQGISMIG 94 >gi|12229856|sp|P94147|MTA1_RUEGE RecName: Full=Modification methylase AgeI; Short=M.AgeI; AltName: Full=Cytosine-specific methyltransferase AgeI gi|8037880|gb|AAF71525.1|AF247972_2 AgeI methylase [Thalassobius gelatinovorus] gi|1695647|dbj|BAA11333.1| ageI metylase [Thalassobius gelatinovorus] gi|1588637|prf||2209243A AgeI methylase Length = 429 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 +K DLFCG GG L + F ++++ ++ TY+ N P+ + D I + Sbjct: 1 MKTIDLFCGAGG----LGEGFRQAGFSALYANDHETPALATYKENHPDAVCSTDSIETVD 56 Query: 61 TQDIPDH--------DVLLAGFPCQPFSQAG 83 + I + DV++ G PCQ FS G Sbjct: 57 PKKIREDLGVAPGQVDVVMGGPPCQGFSTYG 87 >gi|255640237|gb|ACU20409.1| unknown [Glycine max] Length = 385 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 3 KITDLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ + + GIGG+R L + N + V+ F EIN + YQ NF + G+I + Sbjct: 13 RVLEFYSGIGGMRYSLMKAQVNAQVVQAF---EINDTANDVYQHNFGHRPYQGNIQCLTA 69 Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83 D+ + D L PCQP+++ G Sbjct: 70 ADLDKYGADAWLLSPPCQPYTRQG 93 >gi|227875051|ref|ZP_03993196.1| possible DNA-cytosine methyltransferase [Mobiluncus mulieris ATCC 35243] gi|304390295|ref|ZP_07372248.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|306817338|ref|ZP_07451083.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC 35239] gi|227844329|gb|EEJ54493.1| possible DNA-cytosine methyltransferase [Mobiluncus mulieris ATCC 35243] gi|304326051|gb|EFL93296.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304649779|gb|EFM47059.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC 35239] Length = 468 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L Q + ++SEI P+ + P GD+ + Sbjct: 4 LTLGSLFDGSGGFPLAGIQA----GIRPVWASEIEPFPILVTTRRLPQLTHVGDVTTVNG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+ DV+ G PCQ S AG Sbjct: 60 ADVDAVDVITFGSPCQDLSVAG 81 >gi|255280633|ref|ZP_05345188.1| modification methylase DdeI [Bryantella formatexigens DSM 14469] gi|255269098|gb|EET62303.1| modification methylase DdeI [Bryantella formatexigens DSM 14469] Length = 378 Score = 40.4 bits (93), Expect = 0.085, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 13/92 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 MLK DLF G GGI + F C +++I+ + T+ N P + D+ ++ Sbjct: 1 MLKTIDLFAGAGGI----TEGFRKAGYVCVCANDIDEEAKHTFTYNHPTVPFVLKDVREV 56 Query: 60 KTQDI--------PDHDVLLAGFPCQPFSQAG 83 ++ + DV+ G PCQ FS AG Sbjct: 57 TAAELLAAANCTAAEIDVITGGPPCQGFSLAG 88 >gi|313668596|ref|YP_004048880.1| DNA cytosine methyltransferase [Neisseria lactamica ST-640] gi|313006058|emb|CBN87519.1| DNA cytosine methyltransferase [Neisseria lactamica 020-06] Length = 393 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 +K ++F G GG+ LE F H + E+N + + ++NF L++ GD+A Sbjct: 1 MKSLEIFSGAGGLAKGLELAGFQHASF-----IELNKDACNSLRSNFNPKLVYQGDVADF 55 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +V+ G PCQPFS G Sbjct: 56 DLSSQEGIEVIAGGPPCQPFSLGG 79 >gi|309380076|emb|CBX21487.1| putative DNA cytosine methyltransferase [Neisseria lactamica Y92-1009] Length = 377 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 +K ++F G GG+ LE F H + E+N + + ++NF L++ GD+A Sbjct: 1 MKSLEIFSGAGGLAKGLELAGFQHASF-----IELNKDACNSLRSNFNPKLVYQGDVADF 55 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +V+ G PCQPFS G Sbjct: 56 DLSSQEGIEVIAGGPPCQPFSLGG 79 >gi|296081999|emb|CBI21004.3| unnamed protein product [Vitis vinifera] Length = 366 Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 3 KITDLFCGIGGIRLDLEQ-TFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ + + GIGG+R L++ N + VE F +IN + YQ NF + G+I + Sbjct: 15 RVLEFYSGIGGMRYSLKRGGVNAKIVEAF---DINNIANDVYQHNFGHRPCQGNIQSLTA 71 Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83 D+ + L PCQP+++ G Sbjct: 72 ADLDRYRAHAWLLSPPCQPYTRQG 95 >gi|59801568|ref|YP_208280.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae FA 1090] gi|194097887|ref|YP_002000932.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae NCCP11945] gi|239998362|ref|ZP_04718286.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae 35/02] gi|240113683|ref|ZP_04728173.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae MS11] gi|240116425|ref|ZP_04730487.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae PID18] gi|240117164|ref|ZP_04731226.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae PID1] gi|240125114|ref|ZP_04738000.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae SK-92-679] gi|254494438|ref|ZP_05107609.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae 1291] gi|260441646|ref|ZP_05795462.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae DGI2] gi|268594223|ref|ZP_06128390.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae 35/02] gi|268599750|ref|ZP_06133917.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae MS11] gi|268602094|ref|ZP_06136261.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae PID18] gi|268602852|ref|ZP_06137019.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae PID1] gi|268683710|ref|ZP_06150572.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae SK-92-679] gi|291045024|ref|ZP_06570732.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae DGI2] gi|10444408|gb|AAG17898.1|AF297971_2 DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae] gi|59718463|gb|AAW89868.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae FA 1090] gi|193933177|gb|ACF29001.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae NCCP11945] gi|226513478|gb|EEH62823.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae 1291] gi|268547612|gb|EEZ43030.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae 35/02] gi|268583881|gb|EEZ48557.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae MS11] gi|268586225|gb|EEZ50901.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae PID18] gi|268586983|gb|EEZ51659.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae PID1] gi|268623994|gb|EEZ56394.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae SK-92-679] gi|291011027|gb|EFE03024.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae DGI2] gi|317163651|gb|ADV07192.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae TCDC-NG08107] Length = 377 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 +K ++F G GG+ LE F H + E+N + + ++NF L++ GD+A Sbjct: 1 MKSLEIFSGAGGLAKGLELAGFQHASF-----IELNKDACNSLRSNFNPKLVYQGDVADF 55 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +V+ G PCQPFS G Sbjct: 56 DLSSQEGIEVIAGGPPCQPFSLGG 79 >gi|282899425|ref|ZP_06307392.1| DNA-cytosine methyltransferase [Cylindrospermopsis raciborskii CS-505] gi|281195689|gb|EFA70619.1| DNA-cytosine methyltransferase [Cylindrospermopsis raciborskii CS-505] Length = 384 Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59 L +LF G GG+ LE H+ + E++ + T N+ + LI+ D+ K Sbjct: 6 LSCLELFAGAGGLAKGLEMAKIKHKAL-----IELDYNACLTLANNYNHQLIYNVDVRKF 60 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K +++ + D++ G PCQPFS G Sbjct: 61 KFEEVGEVDIIAGGPPCQPFSLGG 84 >gi|283852745|ref|ZP_06370009.1| C-5 cytosine-specific DNA methylase [Desulfovibrio sp. FW1012B] gi|283571826|gb|EFC19822.1| C-5 cytosine-specific DNA methylase [Desulfovibrio sp. FW1012B] Length = 264 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 27/50 (54%) Query: 34 EINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 E +P++ + +P +F D+ I Q+ D+++ GFPCQ S AG Sbjct: 40 ECDPFARSILERRWPGVPVFHDVRDIHAQNAKRVDIVIGGFPCQDISCAG 89 >gi|169834680|ref|YP_001693292.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] gi|169123228|gb|ACA47063.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] Length = 284 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 4/80 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+ F G GG+ L L Q + S EI+ T + NF + + DI+KI Sbjct: 1 MITAKSYFSGAGGMDLGLVQA----GINITHSYEIDSTCCNTLRTNFTHEIHQEDISKIT 56 Query: 61 TQDIPDHDVLLAGFPCQPFS 80 D D D+ + FPC +S Sbjct: 57 VLDQQDADIYVGTFPCTRYS 76 >gi|153814224|ref|ZP_01966892.1| hypothetical protein RUMTOR_00433 [Ruminococcus torques ATCC 27756] gi|145848620|gb|EDK25538.1| hypothetical protein RUMTOR_00433 [Ruminococcus torques ATCC 27756] Length = 702 Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 11/91 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIA-- 57 M +I DLF G GG+ +E+ H E + + N +++T++ N P+T + GDI Sbjct: 349 MFRILDLFSGAGGMSYGMEKN-EHFTTEV--ALDFNEKALQTFKHNMPDTETVCGDITDE 405 Query: 58 KIKTQDI-----PDHDVLLAGFPCQPFSQAG 83 KIK + I ++++ G PCQ FS G Sbjct: 406 KIKAKVIELCKAKKVNMIIGGPPCQGFSLKG 436 >gi|2894387|emb|CAA74997.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase (C2) [Bacillus pumilus] Length = 392 Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 13/90 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-------NTLIF 53 M+ DLF G GG L L+ ++ + E++ ++ +T++ NFP N + Sbjct: 1 MITSLDLFSGAGGFTLGLKNA----GIKTIGAIELDRFASETFRKNFPEIPHYQANITEY 56 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GD IK D++ G PCQ FS AG Sbjct: 57 GDSEIIKL--FKGVDIITGGPPCQGFSVAG 84 >gi|75812889|ref|YP_320506.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] gi|75705645|gb|ABA25317.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] Length = 415 Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 17/91 (18%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 LF G+GG L E E + + NP + TYQ NFP+ T++ DI ++ Q+I Sbjct: 13 SLFSGVGGFDLGFEAA----GFEIAIAIDNNPIVLATYQHNFPHATVLCKDIREVTAQEI 68 Query: 65 P--------DHD----VLLAGFPCQPFSQAG 83 D D + G PCQ FS AG Sbjct: 69 RACIQAKYVDWDGEIHTVFGGPPCQGFSVAG 99 >gi|14601777|ref|NP_148318.1| cytosine-specific DNA methylase [Aeropyrum pernix K1] gi|5105700|dbj|BAA81012.1| cytosine-specific DNA methylase [Aeropyrum pernix K1] Length = 327 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 13/86 (15%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDI 64 D+F G GG + F + + P + +TY+ANFP+T I D+ ++ ++I Sbjct: 9 DVFAGGGG----FSRGFEEAGFRVRVAIDNYPPAARTYKANFPHTAFIADDVKEVGLEEI 64 Query: 65 P--------DHDVLLAGFPCQPFSQA 82 + DV++A PC+PF+ A Sbjct: 65 SSVSGLSPGEVDVVIASPPCEPFTGA 90 >gi|220923821|ref|YP_002499123.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060] gi|219948428|gb|ACL58820.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060] Length = 358 Score = 40.0 bits (92), Expect = 0.092, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 +++ DLFCG GG+ L + S +I+P +YQ NF + + DI+ + Sbjct: 1 MRLIDLFCGCGGLSLGARNA----GFKVVSSVDIDPILTSSYQRNFRGSRPLIADISSLT 56 Query: 61 TQDIPDHDVLLAGF-----PCQPFSQAG 83 ++ H PCQ FS+AG Sbjct: 57 RSELLRHAGGHVDGVVGGPPCQGFSEAG 84 >gi|257453711|ref|ZP_05618997.1| modification methylase Eco47II [Enhydrobacter aerosaccus SK60] gi|257448894|gb|EEV23851.1| modification methylase Eco47II [Enhydrobacter aerosaccus SK60] Length = 415 Score = 40.0 bits (92), Expect = 0.093, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Query: 33 SEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83 +E + Y+ +T +AN P+ +I DI + + D+L GFPCQPFS AG Sbjct: 109 NEKDKYACQTLRANRPDWNVIEDDITNVDFSHLKGQVDLLTGGFPCQPFSYAG 161 >gi|288576182|ref|ZP_05978340.2| DNA (cytosine-5-)-methyltransferase [Neisseria mucosa ATCC 25996] gi|288566126|gb|EFC87686.1| DNA (cytosine-5-)-methyltransferase [Neisseria mucosa ATCC 25996] Length = 406 Score = 40.0 bits (92), Expect = 0.093, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFP--NTLIFGDIA 57 +++ +F GIG + EQ F N+ F+ +I+P+ K+Y N+ DI Sbjct: 33 IRLATVFSGIGAV----EQAFYRLNLNHTIVFAGDIDPHVKKSYLGNYQLDEGFWHDDIT 88 Query: 58 KIKTQDIPDH-DVLLAGFPCQPFSQAG 83 + + + D+L+ G PCQ FS G Sbjct: 89 QFDARKFRNQVDILVGGSPCQAFSMVG 115 >gi|172038906|ref|YP_001805407.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] gi|171700360|gb|ACB53341.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] Length = 427 Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQD 63 DLF G+GG+ L EQ + S E++P ++ NFP T I + +I Sbjct: 9 VDLFAGVGGMTLGFEQA----GFDVLASVELDPIHCSIHRYNFPFWTTICASVTRITANQ 64 Query: 64 IPDH--------DVLLAGFPCQPFSQAG 83 I + DV+ G PCQ FS G Sbjct: 65 IRELSSIQNQPIDVVFGGPPCQGFSLMG 92 >gi|66768381|ref|YP_243143.1| DNA methyltransferase [Xanthomonas campestris pv. campestris str. 8004] gi|66573713|gb|AAY49123.1| DNA methyltransferase [Xanthomonas campestris pv. campestris str. 8004] Length = 512 Score = 40.0 bits (92), Expect = 0.094, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQA 82 +E + +EI P+ ++P+ GD+ I Q +P D+L+ G PCQ FS A Sbjct: 30 LEAAWFAEIEPFPSAVLAHHYPHVPNLGDMTMIARQVHAGTVPAPDILVGGTPCQSFSVA 89 Query: 83 G 83 G Sbjct: 90 G 90 >gi|237731054|ref|ZP_04561535.1| DNA-cytosine methyltransferase [Citrobacter sp. 30_2] gi|226906593|gb|EEH92511.1| DNA-cytosine methyltransferase [Citrobacter sp. 30_2] Length = 411 Score = 40.0 bits (92), Expect = 0.096, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDI 64 + F G G R L + C F+++++P TY N+ D+ +I + D+ Sbjct: 24 EFFAGGGMARAGLGNPW-----RCLFANDMDPIKASTYIDNWGGEHFDTRDVREIPSNDL 78 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P H D+ A FPCQ S AG Sbjct: 79 PRHADLTWASFPCQDLSLAG 98 >gi|119490455|ref|ZP_01622916.1| cytosine specific DNA methyltransferase (DDEM) [Lyngbya sp. PCC 8106] gi|119453926|gb|EAW35081.1| cytosine specific DNA methyltransferase (DDEM) [Lyngbya sp. PCC 8106] Length = 399 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 12/89 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAK-I 59 LK DLFCG+GG+ L+ T R +E ++ + ++ Y+ N P T L+ D+++ + Sbjct: 3 LKALDLFCGMGGLSWGLKST---RKIEPIWAVDNCQTALNLYELNLPKTNLLNLDLSRQL 59 Query: 60 KTQDIPDH-------DVLLAGFPCQPFSQ 81 + + D+++ G PCQ F+Q Sbjct: 60 DVTSLIEKINFNGGIDLMVGGSPCQGFTQ 88 >gi|288941188|ref|YP_003443428.1| DNA-cytosine methyltransferase [Allochromatium vinosum DSM 180] gi|288896560|gb|ADC62396.1| DNA-cytosine methyltransferase [Allochromatium vinosum DSM 180] Length = 372 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLFCG+GG L + ++ +I+ Y+AN P I D+ + Sbjct: 15 IKAVDLFCGVGG----LTHGLSRGGIQVMAGIDIDASCRYPYEANNPARFIEHDVGTLPP 70 Query: 62 QDI------PDHDVLLAGFPCQPFS 80 I D+ +L PCQPFS Sbjct: 71 DLITPYYENADYTLLAGCAPCQPFS 95 >gi|166237008|gb|ABY86226.1| BsaHI DNA methyltransferase [Geobacillus stearothermophilus] Length = 323 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ DLF G GG + + F + E + E +++ Y+ NF + +I D++ ++ Sbjct: 1 MRVIDLFAGCGG----MSKGFENAGYEIVAAFENWKDAIEVYKKNFKHPVIEYDLSNVED 56 Query: 62 QDIPDH---DVLLAGFPCQPFSQAG 83 +I D+++ G PCQ +S AG Sbjct: 57 YNIFKQFKPDMIIGGPPCQDYSSAG 81 >gi|29366785|ref|NP_813725.1| gp9.1 [Streptomyces phage phiBT1] gi|29243105|emb|CAD80133.1| gp9.1 [Streptomyces phage phiBT1] Length = 166 Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust. Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + I +L G GG+ + +E + +E++ + + + FP+ GD+ + Sbjct: 1 MAILELCAGYGGLGIAVEALTGDK---VTVVAEVHKAACEVMKYRFPDAPNIGDVRHARW 57 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 +D+ D + AGFPCQ S AG Sbjct: 58 EDLRGEVDTITAGFPCQDISNAG 80 >gi|311104267|ref|YP_003977120.1| methyltransferase [Achromobacter xylosoxidans A8] gi|310758956|gb|ADP14405.1| cytosine-specific methyltransferase [Achromobacter xylosoxidans A8] Length = 536 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 26 NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQ 81 ++E + +EI P+ +P GD+ I Q +P D+L+ G PCQ FS Sbjct: 34 DLEAAWFAEIEPFPSAVLAHRYPRVPNLGDMTAIARQVRAGTVPAPDILVGGTPCQSFSV 93 Query: 82 AG 83 AG Sbjct: 94 AG 95 >gi|302870555|ref|YP_003839192.1| C-5 cytosine-specific DNA methylase [Micromonospora aurantiaca ATCC 27029] gi|302573414|gb|ADL49616.1| C-5 cytosine-specific DNA methylase [Micromonospora aurantiaca ATCC 27029] Length = 183 Score = 40.0 bits (92), Expect = 0.098, Method: Compositional matrix adjust. Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 +I + G GG+ + +E + + +E + ++ ++P+ GDI + Sbjct: 10 RIGSVCTGYGGLDMAVELVLGG---QLAWYAETDRHAATVLAHHWPDVDNLGDIRTVDWT 66 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D++ AGFPCQ S AG Sbjct: 67 QVAPVDIVTAGFPCQDISNAG 87 >gi|295691449|ref|YP_003595142.1| DNA-cytosine methyltransferase [Caulobacter segnis ATCC 21756] gi|295433352|gb|ADG12524.1| DNA-cytosine methyltransferase [Caulobacter segnis ATCC 21756] Length = 374 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 8/78 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAKIKTQ 62 + F G G R+ L + C F+++ +P TY+ANF GD+ + + Sbjct: 11 EFFAGGGMARIGLGNGWT-----CAFANDFDPVKAATYRANFGADEGHFQQGDVFALSAE 65 Query: 63 DIPDHDVLLAGFPCQPFS 80 +P D+ A PCQ FS Sbjct: 66 TLPTADLAWASSPCQDFS 83 >gi|297159196|gb|ADI08908.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1] Length = 664 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF G GG+ L L++ + + + +++T+ ANFP + D+ +D Sbjct: 46 DLFSGAGGLSLGLQRA----GWTTAAAVDFDERALETHAANFPGMSLRMDLGNPAERDRL 101 Query: 66 DH---------DVLLAGFPCQPFSQAG 83 + D++ G PCQPFS+AG Sbjct: 102 EQVLEPAKGKIDLVAGGPPCQPFSRAG 128 >gi|225164697|ref|ZP_03726934.1| DNA-cytosine methyltransferase [Opitutaceae bacterium TAV2] gi|224800687|gb|EEG19046.1| DNA-cytosine methyltransferase [Opitutaceae bacterium TAV2] Length = 372 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 + ++ G GG L L Q + EI+ + KT + N P+ +F D+ +I+ Sbjct: 5 FSVFEICAGAGGQALGLHQA----GFASAGAVEIDSDACKTLRLNRPDWNVFECDVREIR 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +D D+L G PC PFS AG Sbjct: 61 GRDFAGVDLLAGGVPCPPFSTAG 83 >gi|77918034|ref|YP_355849.1| C-5 cytosine-specific DNA methylase [Pelobacter carbinolicus DSM 2380] gi|77544117|gb|ABA87679.1| C-5 cytosine-specific DNA methylase [Pelobacter carbinolicus DSM 2380] Length = 405 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 13/92 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 MLK L+ G GG+ L LE E + EI+ ++ +T N PN I DI + Sbjct: 1 MLKTISLYTGAGGLDLGLEAA----GFETTVAVEIDKWACQTLCHNRPNWNPIEEDIHNV 56 Query: 60 KTQDIPD--------HDVLLAGFPCQPFSQAG 83 + + +L+ G PCQPFS+A Sbjct: 57 SCATLSEIGGFNSGEASLLIGGPPCQPFSKAA 88 >gi|317132208|ref|YP_004091522.1| DNA-cytosine methyltransferase [Ethanoligenens harbinense YUAN-3] gi|315470187|gb|ADU26791.1| DNA-cytosine methyltransferase [Ethanoligenens harbinense YUAN-3] Length = 346 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 9/92 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQ-TFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIA 57 +++ D F GIGG ++Q N EI+ + K Y + T D+ Sbjct: 4 VIRFFDCFAGIGGFYYGVQQIKSNKYEFRHVAYCEIDKSAQKFYDVACSSEGTQKIQDVK 63 Query: 58 KIKTQDIP------DHDVLLAGFPCQPFSQAG 83 IKT+ P D D+L AGFPCQ FS G Sbjct: 64 DIKTKKNPNGIMVSDFDILFAGFPCQSFSNVG 95 >gi|295673276|ref|XP_002797184.1| DNA repair protein rad8 [Paracoccidioides brasiliensis Pb01] gi|226282556|gb|EEH38122.1| DNA repair protein rad8 [Paracoccidioides brasiliensis Pb01] Length = 2095 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 11/66 (16%) Query: 26 NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD----------IP-DHDVLLAGF 74 N+ FS+EI+P+ Q NF +IF D+ ++ D +P D D+L+ GF Sbjct: 150 NIHHLFSAEIDPFKQSYIQRNFSPDIIFRDVNELIADDATTAFGSLRKVPADLDLLIVGF 209 Query: 75 PCQPFS 80 C FS Sbjct: 210 SCVDFS 215 >gi|307595752|ref|YP_003902069.1| DNA-cytosine methyltransferase [Vulcanisaeta distributa DSM 14429] gi|307550953|gb|ADN51018.1| DNA-cytosine methyltransferase [Vulcanisaeta distributa DSM 14429] Length = 321 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 10/84 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + DLF G GG + F + E++ + +T+ NFP +I DI + + Sbjct: 5 VVDLFAGAGG----FSRGFKDVGFDVALGVEVDINAARTFSYNFPEAVMITDDIRNVSGK 60 Query: 63 DIPDH-----DVLLAGFPCQPFSQ 81 DI + DV++ G PC+ F++ Sbjct: 61 DIIKYIGGRPDVIIGGSPCEAFTE 84 >gi|91784577|ref|YP_559783.1| C-5 cytosine-specific DNA methylase [Burkholderia xenovorans LB400] gi|40019222|emb|CAE92946.1| putative DNA methyltransferase [Pseudomonas putida] gi|91688531|gb|ABE31731.1| C-5 cytosine-specific DNA methylase [Burkholderia xenovorans LB400] Length = 533 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQA 82 +E + +EI P+ +P+ GD+ I Q +P D+L+ G PCQ FS A Sbjct: 39 LEAAWFAEIEPFPSAVLAHRYPHVPNLGDMTAIARQVRAGTVPAPDILVGGTPCQSFSVA 98 Query: 83 G 83 G Sbjct: 99 G 99 >gi|304390602|ref|ZP_07372555.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326358|gb|EFL93603.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 321 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ DLF G GG+ L EQ ++ V F P +V Y+ NF + + D+A + Sbjct: 25 MRVIDLFSGCGGMSLGFEQG-GYQVVAAF--DNWQP-AVDIYKENFQHPIHNIDLATDEA 80 Query: 62 QDIPDH---DVLLAGFPCQPFSQAG 83 +I + DV++ G PCQ +S AG Sbjct: 81 LEIIEQAKPDVIIGGPPCQDYSIAG 105 >gi|34451616|gb|AAQ72364.1| methylase fusion protein [Geobacillus stearothermophilus] Length = 1007 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 12/89 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT 61 K DLFCG GG L F ++ ++I + T + N P + GDI++ +T Sbjct: 774 KSIDLFCGAGG----LTAGFKEAGIQSVLCNDIEESACITLKINNPEIKVLCGDISQHET 829 Query: 62 QDI-------PDHDVLLAGFPCQPFSQAG 83 ++ D D++ G PCQ FS AG Sbjct: 830 KEHIVNVAINEDVDIICGGPPCQGFSMAG 858 >gi|323487872|ref|ZP_08093130.1| cytosine-specific methyltransferase [Planococcus donghaensis MPA1U2] gi|323398606|gb|EGA91394.1| cytosine-specific methyltransferase [Planococcus donghaensis MPA1U2] Length = 367 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 7/80 (8%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAK-IKT-QD 63 LF G GG ++ F + +++EI+ + TY+ N P T++ GD+ I+T ++ Sbjct: 10 LFTGAGG----MDVGFKSAGIHVEWANEIDKDACNTYETNNPETILAKGDLRNYIETLKE 65 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D D++ G PCQ FS AG Sbjct: 66 HRDIDIVFGGPPCQGFSVAG 85 >gi|239622757|ref|ZP_04665788.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239514754|gb|EEQ54621.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 390 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 12/85 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDIAKIK 60 + F GIG RL LE+ H +S++I+ + Y+ F N TLI GD+ ++ Sbjct: 20 EFFAGIGLARLGLEEAGFH----VAWSNDIDHAKCQMYRNQFGNNEQEHTLIEGDMGELH 75 Query: 61 TQDIPDHDVLLA--GFPCQPFSQAG 83 D+P HD+ +A PC S AG Sbjct: 76 GSDLP-HDISIAWGSSPCTDISLAG 99 >gi|10955252|ref|NP_052188.1| DNA-methyltransferase [Escherichia coli] gi|1237268|gb|AAC37145.1| eco29kIM [Escherichia coli] gi|2660513|emb|CAA04944.1| DNA-methyltransferase [Escherichia coli] Length = 382 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 ++ ++F G GG+ LE F H E+N ++ + + NF +F GDI Sbjct: 1 MRSLEIFSGAGGLAKGLELAGFQHVGF-----VELNKHACDSLRLNFDEEKVFQGDIKNY 55 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + D++ G PCQPFS G Sbjct: 56 DLSSLDKIDIVAGGPPCQPFSLGG 79 >gi|268611949|ref|ZP_06145676.1| DNA-cytosine methyltransferase [Ruminococcus flavefaciens FD-1] Length = 352 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GI L L++ VEC+ + EI+ Y+V + NFP + G++ Sbjct: 1 MKVLSLFDGISCGMLALQRA--GIPVECYDAFEIDKYAVTVSKRNFPVIVHHGNVYDGDF 58 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 +D+LL G PC +S A Sbjct: 59 TQFRGYDLLLGGSPCTYWSIA 79 >gi|296453364|ref|YP_003660507.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. longum JDM301] gi|296182795|gb|ADG99676.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. longum JDM301] Length = 392 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 11/84 (13%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIAKIKT 61 + F GIG RL LE+ + +S++I+ + Y+ NF +T L+ GD++++ Sbjct: 19 EFFAGIGLARLGLEEA----GFQVEWSNDIDAAKCEMYRNNFTDTPGHTLVEGDMSELSG 74 Query: 62 QDIPDHDVLLA--GFPCQPFSQAG 83 D+P HD +A PC S AG Sbjct: 75 DDLP-HDASIAWGSSPCTDLSLAG 97 >gi|225691140|gb|ACO06242.1| 5'-methylcytosine methyltransferase M.BbrI [Bifidobacterium breve UCC2003] Length = 392 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 11/84 (13%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIAKIKT 61 + F GIG RL LE+ + +S++I+ + Y+ NF +T L+ GD++++ Sbjct: 19 EFFAGIGLARLGLEEA----GFQVEWSNDIDAAKCEMYRNNFTDTPGHTLVEGDMSELSG 74 Query: 62 QDIPDHDVLLA--GFPCQPFSQAG 83 D+P HD +A PC S AG Sbjct: 75 DDLP-HDASIAWGSSPCTDLSLAG 97 >gi|163855756|ref|YP_001630054.1| putative DNA-cytosine methyltransferase [Bordetella petrii DSM 12804] gi|163259484|emb|CAP41784.1| putative DNA-cytosine methyltransferase [Bordetella petrii] Length = 201 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 26 NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQ 81 +E + +EI P+ +P+ GD+ I Q +P D+L+ G PCQ FS Sbjct: 38 GLEAAWFAEIEPFPSAVLAHRYPHVPNLGDMTAIARQVRAGTVPAPDILVGGTPCQSFSV 97 Query: 82 AG 83 AG Sbjct: 98 AG 99 >gi|40850587|gb|AAR96017.1| M2.BsaI [Geobacillus stearothermophilus] Length = 381 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 17/94 (18%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + DLF G GG+ L F + +++I+ +++ TY N N ++ GDI K Sbjct: 125 QFVDLFSGAGGLSLG----FLWAGWKPIIANDIDKWALTTYMNNIHNEVVLGDIRDEKVS 180 Query: 63 DI------------PDHDV-LLAGFPCQPFSQAG 83 + PD + +L G PCQ FS AG Sbjct: 181 ETIIQKCLIAKKSNPDRPLFVLGGPPCQGFSTAG 214 >gi|226292283|gb|EEH47703.1| DNA repair protein rad8 [Paracoccidioides brasiliensis Pb18] Length = 2038 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 11/66 (16%) Query: 26 NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD----------IP-DHDVLLAGF 74 N+ FS+EI+P+ Q NF +IF D+ ++ D +P D D+L+ GF Sbjct: 151 NIHHLFSAEIDPFKQSYIQRNFSPDIIFRDVNELIADDATTAFGSLRKVPADLDLLIVGF 210 Query: 75 PCQPFS 80 C FS Sbjct: 211 SCVDFS 216 >gi|113474395|ref|YP_720456.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] gi|110165443|gb|ABG49983.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] Length = 421 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 DLF G GG+ L EQ + S E++P ++ NFP +++ ++ ++ +I Sbjct: 8 DLFAGAGGMTLGFEQA----GFDIPISVELDPIHCAIHKFNFPFWSILCRNVVELTGNEI 63 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 + DV+ G PCQ FSQ G Sbjct: 64 REKLNIPNREIDVIFGGPPCQGFSQIG 90 >gi|320540918|ref|ZP_08040419.1| putative site-specific DNA methylase [Serratia symbiotica str. Tucson] gi|320029019|gb|EFW11197.1| putative site-specific DNA methylase [Serratia symbiotica str. Tucson] Length = 223 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 8/81 (9%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKIKTQD 63 + F G G R L + +C F+++ +P Y++N+ L+ DI I + Sbjct: 45 EFFAGGGMARAGLGAQW-----DCLFANDFSPMKGHAYRSNWSGGTDLLVEDINNITSAQ 99 Query: 64 IPDH-DVLLAGFPCQPFSQAG 83 +P D++ A FPCQ S AG Sbjct: 100 LPAQADLVWASFPCQDLSLAG 120 >gi|261338523|ref|ZP_05966407.1| modification methylase Sau3AI [Bifidobacterium gallicum DSM 20093] gi|270276533|gb|EFA22387.1| modification methylase Sau3AI [Bifidobacterium gallicum DSM 20093] Length = 423 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 24/105 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHR----------NVECFFSSEINP-------YSVKTYQ 44 ++I +LF G+GG RL L+ N + ++++ P ++ + Y+ Sbjct: 4 IRIAELFAGVGGFRLGLDGYDNPEHPDFHMEPAGDFRTVWANQWEPNGQDSKQFAWRCYE 63 Query: 45 ANF-PNTLIFGDIAKIKTQ------DIPDHDVLLAGFPCQPFSQA 82 F + + DIA + Q +IP+ D+L+ GFPCQ +S A Sbjct: 64 DRFGAGSCVNEDIAVVLDQVDAGEREIPEFDMLVGGFPCQDYSVA 108 >gi|172038386|ref|YP_001804887.1| site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] gi|171699840|gb|ACB52821.1| probable site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] Length = 461 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 13/85 (15%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI--- 64 F G G+ + +EQ + C EI+ Y +T N PN + GDI DI Sbjct: 77 FSGAMGLDIGIEQAGFDIKLAC----EIDKYCRQTIALNKPNIALVGDINSCSADDILSY 132 Query: 65 ------PDHDVLLAGFPCQPFSQAG 83 D D+++ G PCQ FS AG Sbjct: 133 AGLTRSDDIDLIVGGPPCQAFSTAG 157 >gi|226223282|ref|YP_002757389.1| type II DNA modification enzyme (methyltransferase) [Listeria monocytogenes Clip81459] gi|225875744|emb|CAS04447.1| Putative type II DNA modification enzyme (methyltransferase) [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 389 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 14/97 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHR------NVECFFSSEINPYSVKTYQANFPNTLIFG 54 M+++ DLF G GG+ L + + + F++E++ ++ + + NFP + Sbjct: 1 MIRVVDLFSGAGGLTLGFQNRIINNTFLPMSDYNILFANEVDKHASEAFSLNFPQIPMLN 60 Query: 55 DIAKIKTQDIPDH--------DVLLAGFPCQPFSQAG 83 T+D D+ D+++ G PCQ FS G Sbjct: 61 CSITELTEDYLDNHEIEYSNIDLVIGGPPCQSFSTVG 97 >gi|153940750|ref|YP_001392502.1| hypothetical protein CLI_3290 [Clostridium botulinum F str. Langeland] gi|152936646|gb|ABS42144.1| conserved domain protein [Clostridium botulinum F str. Langeland] Length = 338 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 3/83 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV-ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 L D F G+GG R +E +H+ V C + N S K + + DI +K Sbjct: 3 LTFIDFFAGVGGFRKGMEMA-DHKCVGHCEWDKFAN-MSYKEIHSPKEDEWFGTDIRNVK 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++P D GFPCQ S AG Sbjct: 61 ATELPRADCWCFGFPCQDISVAG 83 >gi|251781727|ref|YP_002996029.1| 5-methylcytosine methyltransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390356|dbj|BAH80815.1| 5-methylcytosine methyltransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 422 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 7/88 (7%) Query: 2 LKITDLFCGIGGIRLDLEQT----FNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDI 56 +KI +LF G+GG R+ LE F + + S + + + Y +F ++ I I Sbjct: 1 MKILELFAGVGGFRVGLENADKDLFQTKWANQWEPSRKSQDAFEVYDYHFSDSQNINISI 60 Query: 57 AKIKTQDIP--DHDVLLAGFPCQPFSQA 82 + I +D D D+++ GFPCQ +S A Sbjct: 61 SDITDEDFEKMDADMIVGGFPCQDYSVA 88 >gi|167997277|ref|XP_001751345.1| predicted protein [Physcomitrella patens subsp. patens] gi|162697326|gb|EDQ83662.1| predicted protein [Physcomitrella patens subsp. patens] Length = 812 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE-CFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 L + LF G+GGI Q + + +SSE+ +++ ++ P+ GD+ K+ Sbjct: 146 LVVLSLFDGLGGIW----QALTNLGIPFSGYSSEVLAPAIQVVKSRHPHVKHVGDVRKLN 201 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 IP+ D+++ GFPCQ S G Sbjct: 202 LSAIPEKVDLVVGGFPCQDLSIMG 225 >gi|323454079|gb|EGB09949.1| hypothetical protein AURANDRAFT_62427 [Aureococcus anophagefferens] Length = 634 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKI 59 ++ +LF GIGG R LE + EI + + Y ANF +L + ++ Sbjct: 184 VVTFAELFAGIGGFRAGLEAAAGAPPAP-AVACEILESARRIYAANFGAESLTAAPVQRL 242 Query: 60 KTQDIPDHDVLLAGFPCQPFS-QAG 83 +P D+L+AGFPCQ ++ QAG Sbjct: 243 DR--LPACDLLMAGFPCQSYTEQAG 265 >gi|223937258|ref|ZP_03629164.1| DNA-cytosine methyltransferase [bacterium Ellin514] gi|223894043|gb|EEF60498.1| DNA-cytosine methyltransferase [bacterium Ellin514] Length = 408 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 14/92 (15%) Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN--------TL 51 +L+ +LF G GG+ + L F R + E N ++ +T + N N L Sbjct: 7 ILRSLELFAGAGGLAIGLHHAGFKPRAL-----VEFNRHACETLRFNADNGFETLNGAKL 61 Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GD+ ++ +I DV+ G PCQPFS G Sbjct: 62 FAGDVREVDFAEIDAVDVVTGGPPCQPFSIGG 93 >gi|21553420|gb|AAM62513.1| DNA methyltransferase PMT1-like protein [Arabidopsis thaliana] Length = 383 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 3 KITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ + + GIGG+R L + VE F EIN + YQ NF + G+I + Sbjct: 16 QVLEFYSGIGGMRYSLMASGIVSEVVEAF---EINDSANDVYQHNFKHRPYQGNIQSLTA 72 Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83 D+ + D L PCQP+++ G Sbjct: 73 ADLDKYNADAWLLSPPCQPYTRQG 96 >gi|296206220|ref|XP_002750112.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase isoform 1 [Callithrix jacchus] Length = 391 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L++ +L+ G+GG+ L ++ V + ++N + + Y+ NFP+T L+ I I Sbjct: 4 LRVLELYSGVGGMHHALRESCIPAQVVA--AIDVNTVANEVYRFNFPHTQLLAKTIEGIT 61 Query: 61 TQ--DIPDHDVLLAGFPCQPFSQAG 83 Q D D++L PCQPF++ G Sbjct: 62 LQEFDRLSFDMILMSPPCQPFTRIG 86 >gi|328946253|gb|EGG40397.1| modification methylase Sau96I [Streptococcus sanguinis SK1087] Length = 333 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +K+ +LF G GG+ L +E+ E E + + +T ++N P+ +I DI KI Sbjct: 1 MKVIELFAGAGGLALGIERA----GFESIGLIEFDKAASETLKSNRPDWNVIHEDIEKIS 56 Query: 61 TQDIPDH--------DVLLAGFPCQPFSQAG 83 ++ + D+L G PCQ FS AG Sbjct: 57 PLNLEELFNIRKGELDLLSGGAPCQSFSYAG 87 >gi|223983703|ref|ZP_03633876.1| hypothetical protein HOLDEFILI_01157 [Holdemania filiformis DSM 12042] gi|223964334|gb|EEF68673.1| hypothetical protein HOLDEFILI_01157 [Holdemania filiformis DSM 12042] Length = 340 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 10/83 (12%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------AKIK 60 LF GIGG+ L E +C ++ PYSV + ++P F DI A + Sbjct: 9 LFSGIGGLDLAAEAAGFRTVCQCEWADY--PYSV--LEKHWPEVPRFRDITTFTKEAFFE 64 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + V+ GFPCQPFS AG Sbjct: 65 KTGLETVTVISGGFPCQPFSTAG 87 >gi|148555377|ref|YP_001262959.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1] gi|148500567|gb|ABQ68821.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1] Length = 412 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK LF GIGG+ E + + EI+ S + N +I DI + T Sbjct: 9 LKAISLFTGIGGLDFGFEAA----GFDTAVALEIDKASCRVLGDNRDWPIIGEDIHDVGT 64 Query: 62 Q--------DIPDHDVLLAGFPCQPFSQAG 83 ++ + D+L+ G PCQPFS++G Sbjct: 65 PRLLQAANLEVGEADILIGGPPCQPFSKSG 94 >gi|261820947|ref|YP_003259053.1| DNA-cytosine methyltransferase [Pectobacterium wasabiae WPP163] gi|261604960|gb|ACX87446.1| DNA-cytosine methyltransferase [Pectobacterium wasabiae WPP163] Length = 487 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQAG 83 SEI+P+ +P+ GD+ +I Q ++ D+L+ G PCQ FS AG Sbjct: 37 SEIDPFPCAVLAHRYPHVPNLGDMTRIANQVRVGEVIAPDILVGGTPCQAFSIAG 91 >gi|56385094|gb|AAV85978.1| 5' cytosine DNA methyl transferase-like protein [Pristionchus pacificus] Length = 313 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ + +CGIGGI L++T ++ F +IN + Y+ NFP+T + + I+ Sbjct: 10 VKVLEFYCGIGGIHFALKRTSIPFHIAAAF--DINTTTNVIYRHNFPSTKL--KESNIQG 65 Query: 62 QDIPDHDVLLAGF-----PCQPFSQAG 83 + D L A PCQPF+ G Sbjct: 66 VSVSSLDKLGAELWTMSPPCQPFTLKG 92 >gi|22256926|sp|O33481|MTP1_PSYTA RecName: Full=Modification methylase PspPI; Short=M.PspPI; AltName: Full=Cytosine-specific methyltransferase PspPI gi|2558610|emb|CAA68841.1| type II DNA m5C-methyltransferase [Psychrobacter sp.] Length = 416 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Query: 33 SEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83 +E + Y+ T +AN PN +I DI + + D+L GFPCQPFS AG Sbjct: 104 NEKDKYACATLRANRPNWNVIEDDIENVDFTHLNGKVDLLTGGFPCQPFSYAG 156 >gi|291460136|ref|ZP_06599526.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291417477|gb|EFE91196.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 319 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 10/83 (12%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGG+ L E ++ E+ Y + ++P+ + DI + + + Sbjct: 6 LFSGIGGLDLAAEWA----GIKTVGQCELADYPYSVLEKHWPDVPKWRDIRDLTKESFYE 61 Query: 67 H------DVLLAGFPCQPFSQAG 83 D++ GFPCQPFS AG Sbjct: 62 RTGLRTVDIISGGFPCQPFSFAG 84 >gi|209527695|ref|ZP_03276192.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209491867|gb|EDZ92225.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 314 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 ++ DLF G GG+ L E +++ F EI ++K YQ NF + + D+++ Sbjct: 1 MRTIDLFAGCGGLSLGFENA--GFDIKAAF--EIWQPAIKVYQRNFRHPIFQVDLSEESV 56 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I T +V++ G PCQ FS AG Sbjct: 57 IHTLREYKPEVIIGGPPCQDFSSAG 81 >gi|18420929|ref|NP_568474.1| DNMT2 (DNA METHYLTRANSFERASE-2); DNA binding [Arabidopsis thaliana] gi|332006070|gb|AED93453.1| DNA methyltransferase-2 [Arabidopsis thaliana] Length = 383 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 3 KITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ + + GIGG+R L + VE F EIN + YQ NF + G+I + Sbjct: 16 QVLEFYSGIGGMRYSLMASGIVSEVVEAF---EINDSANDVYQHNFKHRPYQGNIQSLTA 72 Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83 D+ + D L PCQP+++ G Sbjct: 73 ADLDKYNADAWLLSPPCQPYTRQG 96 >gi|154486241|ref|ZP_02027648.1| hypothetical protein BIFADO_00044 [Bifidobacterium adolescentis L2-32] gi|154084104|gb|EDN83149.1| hypothetical protein BIFADO_00044 [Bifidobacterium adolescentis L2-32] Length = 213 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K LF GI + QT V +EI P+ + ++PN GD+ K+ Sbjct: 1 MKYISLFSGIEAATVAW-QTLGWEPVA---YAEIEPFPKAVLKHHYPNVPDLGDMTKVNW 56 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 ++ DV++ G PCQ FS AG Sbjct: 57 KEYHHAADVVVGGSPCQAFSIAG 79 >gi|323694940|ref|ZP_08109090.1| type II DNA modification methyltransferase [Clostridium symbiosum WAL-14673] gi|323501030|gb|EGB16942.1| type II DNA modification methyltransferase [Clostridium symbiosum WAL-14673] Length = 338 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 10/83 (12%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------AKIK 60 LF GIGG+ L E +C ++ PYSV + ++P+ F DI A + Sbjct: 9 LFSGIGGLDLAAEAAGFETVCQCEWADY--PYSV--LERHWPDVPKFRDITTFTKEAFFE 64 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + ++ GFPCQPFS AG Sbjct: 65 KTGLETVTIISGGFPCQPFSTAG 87 >gi|300866085|ref|ZP_07110814.1| site-specific DNA-methyltransferase [Oscillatoria sp. PCC 6506] gi|300335911|emb|CBN55972.1| site-specific DNA-methyltransferase [Oscillatoria sp. PCC 6506] Length = 436 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 32/87 (36%), Positives = 41/87 (47%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DI--AKI 59 D F G GG+ L EQ + S EI+P T+ NFP +F DI A+I Sbjct: 14 DFFAGAGGMTLGFEQA----GFDVLASVEIDPIHCATHNFNFPFWSVFCQSIIDITGAEI 69 Query: 60 KTQD-IPDH--DVLLAGFPCQPFSQAG 83 + + I D DV+ G PCQ FS G Sbjct: 70 RQKSAIGDREIDVVFGGPPCQGFSLIG 96 >gi|147856667|emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera] Length = 1148 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 8/85 (9%) Query: 3 KITDLFCGIGGIRLDLEQ-TFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ + + GIGG+R L++ N + VE F +IN + YQ NF + G+I + Sbjct: 865 RVLEFYSGIGGMRYSLKRGGVNAKIVEAF---DINNIANDVYQHNFGHRPYQGNIQSLTA 921 Query: 62 QDIPD---HDVLLAGFPCQPFSQAG 83 D+ H LL+ PCQP+++ G Sbjct: 922 ADLDRYRAHAWLLSP-PCQPYTRQG 945 >gi|121592996|ref|YP_984892.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42] gi|120605076|gb|ABM40816.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42] Length = 449 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 16/97 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF---FSSEINPYSVKTYQA----------NFP 48 L++ +LF G+GG R LEQ F ++++ P S K + A + Sbjct: 12 LRVMELFAGVGGFRQGLEQVRTPAQQAAFKVVWANQYEPASKKQWAAEVYRARWGVQDLV 71 Query: 49 NTLIF---GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 N IF + A + + D DVL+ GFPCQ +S A Sbjct: 72 NEDIFEVLQEPALMASLDALCPDVLVGGFPCQDYSVA 108 >gi|241763153|ref|ZP_04761213.1| C-5 cytosine-specific DNA methylase [Acidovorax delafieldii 2AN] gi|241367778|gb|EER62032.1| C-5 cytosine-specific DNA methylase [Acidovorax delafieldii 2AN] Length = 536 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQA 82 +E + +EI P+ +P GD+ I Q +P D+L+ G PCQ FS A Sbjct: 38 LEAAWFAEIEPFPSAVLAHRYPRVPNLGDMTAIARQVRAGTVPAPDILVGGTPCQSFSVA 97 Query: 83 G 83 G Sbjct: 98 G 98 >gi|121593710|ref|YP_985606.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42] gi|121593834|ref|YP_985730.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42] gi|120605790|gb|ABM41530.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42] gi|120605914|gb|ABM41654.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42] Length = 539 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQA 82 +E + +EI P+ +P GD+ I Q +P D+L+ G PCQ FS A Sbjct: 38 LEAAWFAEIEPFPSAVLAHRYPRVPNLGDMTAIARQVRAGTVPAPDILVGGTPCQSFSVA 97 Query: 83 G 83 G Sbjct: 98 G 98 >gi|15838375|ref|NP_299063.1| DNA methyltransferase [Xylella fastidiosa 9a5c] gi|9106848|gb|AAF84583.1|AE003999_11 DNA methyltransferase [Xylella fastidiosa 9a5c] Length = 537 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQA 82 +E + +EI P+ +P GD+ I Q +P D+L+ G PCQ FS A Sbjct: 38 LEAAWFAEIEPFPSAVLAHRYPRVPNLGDMTAIARQVRAGTVPAPDILVGGTPCQSFSVA 97 Query: 83 G 83 G Sbjct: 98 G 98 >gi|78047961|ref|YP_364136.1| DNA methyltransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036391|emb|CAJ24082.1| DNA methyltransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 538 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQA 82 +E + +EI P+ +P GD+ I Q +P D+L+ G PCQ FS A Sbjct: 38 LEAAWFAEIEPFPSAVLAHRYPRVPNLGDMTAIARQVRAGTVPAPDILVGGTPCQSFSVA 97 Query: 83 G 83 G Sbjct: 98 G 98 >gi|156936516|ref|YP_001440431.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC BAA-894] gi|156534770|gb|ABU79595.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC BAA-894] Length = 415 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 13/84 (15%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDI 64 DLF G GG L + +++EI+P +TY N P T++ DI ++ I Sbjct: 20 DLFAGAGG----LSEGLREAGFTSLYANEISPRYAQTYAVNHPGTIVESRDIREVDAHKI 75 Query: 65 P--------DHDVLLAGFPCQPFS 80 + D++ G PCQ FS Sbjct: 76 RNLLGLKRGELDLIAGGPPCQGFS 99 >gi|168207191|ref|ZP_02633196.1| modification methylase ScrFIB [Clostridium perfringens E str. JGS1987] gi|170661387|gb|EDT14070.1| modification methylase ScrFIB [Clostridium perfringens E str. JGS1987] Length = 310 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 12/87 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+KI +LF GIG R L V+ EI+ +V++Y F L K K Sbjct: 1 MIKILELFGGIGSPRKALVNL--GVPVKAIDYVEIDKKAVRSYNEMFKKDL------KYK 52 Query: 61 TQDIPDH----DVLLAGFPCQPFSQAG 83 TQ + + D+L+ G PCQ FS AG Sbjct: 53 TQSVVGYNLKPDILIHGSPCQSFSIAG 79 >gi|115386470|ref|XP_001209776.1| predicted protein [Aspergillus terreus NIH2624] gi|114190774|gb|EAU32474.1| predicted protein [Aspergillus terreus NIH2624] Length = 597 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT--Q 62 D FCG GG+ + H ++ +++ ++++TY NFP T + D+ + Sbjct: 296 DAFCGAGGVSCGARKAGLHNE----WAVDVSQHALETYGLNFPTTDCWQADVNSFLSLNH 351 Query: 63 DIPDHDVLLAGFPCQPFSQA 82 D DVL PCQPFS A Sbjct: 352 DYLKVDVLHGSPPCQPFSPA 371 >gi|312278085|gb|ADQ62742.1| Cytosine-specific methyltransferase [Streptococcus thermophilus ND03] Length = 424 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-----SVKTYQANFPNTLIFGDI 56 + + +LF G+GG R+ LE N +S++ P + + Y +FP++ + Sbjct: 1 MNVLELFAGVGGFRIGLENA-NPDYFRTLWSNQWEPSRKSQDAFEVYNYHFPDS----EN 55 Query: 57 AKIKTQDIPDH-------DVLLAGFPCQPFSQA 82 I DI D D+++ GFPCQ +S A Sbjct: 56 INISIADITDEQFAEMNADMIVGGFPCQDYSVA 88 >gi|296243020|ref|YP_003650507.1| DNA-cytosine methyltransferase [Thermosphaera aggregans DSM 11486] gi|296095604|gb|ADG91555.1| DNA-cytosine methyltransferase [Thermosphaera aggregans DSM 11486] Length = 323 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 24/93 (25%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLFCG GG L T R + NP + TY+ NFP + K+ +D Sbjct: 6 VVDLFCGAGGFSLGFHLTRRFRTLLAI--DNYNPAGL-TYKLNFP-------MVKVLLED 55 Query: 64 IPDH--------------DVLLAGFPCQPFSQA 82 I D DVL+ PC+PF+ A Sbjct: 56 IKDVNDSLLRKILGGAKIDVLIGSPPCEPFTGA 88 >gi|331002102|ref|ZP_08325621.1| hypothetical protein HMPREF0491_00483 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411196|gb|EGG90612.1| hypothetical protein HMPREF0491_00483 [Lachnospiraceae oral taxon 107 str. F0167] Length = 309 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 19/86 (22%) Query: 6 DLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 +LF GIG IR L Q HR ++ EI+ VK+Y A + A K++DI Sbjct: 2 ELFGGIGAIRKALIRQNIPHRVIDYV---EIDKNCVKSYNALYK--------ANFKSKDI 50 Query: 65 -----PDH--DVLLAGFPCQPFSQAG 83 P+ D+L+ G PCQ FS+ G Sbjct: 51 VGYHAPNENIDLLMHGSPCQDFSRVG 76 >gi|323484993|ref|ZP_08090347.1| hypothetical protein HMPREF9474_02098 [Clostridium symbiosum WAL-14163] gi|323401735|gb|EGA94079.1| hypothetical protein HMPREF9474_02098 [Clostridium symbiosum WAL-14163] Length = 361 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIG L + + ++SEI + + +FP+ + GDI K+ Sbjct: 4 IKLGSLFDGIGVFPLAASRC----GIRPVWASEIEKAPISITKRHFPDMVHLGDITKVDG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP ++ G PCQ S G Sbjct: 60 GKIPPVHIITFGSPCQNLSLIG 81 >gi|291564095|emb|CBL42911.1| Site-specific DNA methylase [butyrate-producing bacterium SS3/4] Length = 361 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIG L + + ++SEI + + +FP+ + GDI K+ Sbjct: 4 IKLGSLFDGIGVFPLAASRC----GIRPVWASEIEKAPISITKRHFPDMVHLGDITKVDG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP ++ G PCQ S G Sbjct: 60 GKIPPVHIITFGSPCQNLSLIG 81 >gi|256419690|ref|YP_003120343.1| DNA-cytosine methyltransferase [Chitinophaga pinensis DSM 2588] gi|256034598|gb|ACU58142.1| DNA-cytosine methyltransferase [Chitinophaga pinensis DSM 2588] Length = 390 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 14/93 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIF----GD 55 +K+ DL+CG GG+ + E T + E + ++VKT+ N P N L D Sbjct: 4 IKVLDLYCGYGGLSMGFEFT---KAFEVVGGIDFYDWAVKTFYYNHPQLNKLKVINKPCD 60 Query: 56 IAKIKTQDIPDH-----DVLLAGFPCQPFSQAG 83 + ++T ++ D+++ G PCQ FS AG Sbjct: 61 MTNLETSEVLKDIGGKPDIIVGGPPCQGFSFAG 93 >gi|238923216|ref|YP_002936731.1| DNA-cytosine methyltransferase [Eubacterium rectale ATCC 33656] gi|238925032|ref|YP_002938548.1| DNA-cytosine methyltransferase [Eubacterium rectale ATCC 33656] gi|238874890|gb|ACR74597.1| DNA-cytosine methyltransferase [Eubacterium rectale ATCC 33656] gi|238876707|gb|ACR76414.1| DNA-cytosine methyltransferase [Eubacterium rectale ATCC 33656] Length = 361 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIG L + + ++SEI + + +FP+ + GDI K+ Sbjct: 4 IKLGSLFDGIGVFPLAASRC----GIRPVWASEIEKAPISITKRHFPDMVHLGDITKVDG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP ++ G PCQ S G Sbjct: 60 GKIPPVHIITFGSPCQNLSLIG 81 >gi|160893193|ref|ZP_02073981.1| hypothetical protein CLOL250_00739 [Clostridium sp. L2-50] gi|160945817|ref|ZP_02093043.1| hypothetical protein FAEPRAM212_03350 [Faecalibacterium prausnitzii M21/2] gi|156865276|gb|EDO58707.1| hypothetical protein CLOL250_00739 [Clostridium sp. L2-50] gi|158443548|gb|EDP20553.1| hypothetical protein FAEPRAM212_03350 [Faecalibacterium prausnitzii M21/2] Length = 361 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIG L + + ++SEI + + +FP+ + GDI K+ Sbjct: 4 IKLGSLFDGIGVFPLAASRC----GIRPVWASEIEKAPISITKRHFPDMVHLGDITKVDG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP ++ G PCQ S G Sbjct: 60 GKIPPVHIITFGSPCQNLSLIG 81 >gi|115345708|ref|YP_771887.1| DNA-cytosine methyltransferase, putative [Roseobacter denitrificans OCh 114] gi|115293028|gb|ABI93479.1| DNA-cytosine methyltransferase, putative [Roseobacter denitrificans OCh 114] Length = 394 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 7/82 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M K + F G G R L + + +C F+++ + TY+ N+ + +I DI I Sbjct: 10 MFKFYEFFAGGGMARAGLGEGW-----KCEFANDFDRKKGATYKKNWGDGEMIVDDIRNI 64 Query: 60 KTQDIPDH-DVLLAGFPCQPFS 80 D+P H D++ FPCQ S Sbjct: 65 GLDDLPGHADLVWGSFPCQDLS 86 >gi|313115273|ref|ZP_07800751.1| C-5 cytosine-specific DNA methylase [Faecalibacterium cf. prausnitzii KLE1255] gi|310622412|gb|EFQ05889.1| C-5 cytosine-specific DNA methylase [Faecalibacterium cf. prausnitzii KLE1255] Length = 338 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 10/83 (12%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------AKIK 60 LF GIGG+ L E +C ++ PYS+ + ++PN F DI A + Sbjct: 9 LFSGIGGLDLAAEAAGFETVCQCEWADY--PYSI--LEQHWPNVPKFRDITTFTKEAFFE 64 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + ++ GFPCQPFS G Sbjct: 65 KTGLETVTIISGGFPCQPFSSVG 87 >gi|291303703|ref|YP_003514981.1| C-5 cytosine-specific DNA methylase [Stackebrandtia nassauensis DSM 44728] gi|290572923|gb|ADD45888.1| C-5 cytosine-specific DNA methylase [Stackebrandtia nassauensis DSM 44728] Length = 552 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L I D FCG GG ++ VE ++ ++ ++ ANFP+ GDI K+ Sbjct: 3 LTIMDWFCGAGGSSQGIDAV---PGVEVTLAANHWQLALDSHAANFPHVDHKIGDIRKLP 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 QD P D A C+ FS A Sbjct: 60 VQDWPIADGFWASPECKKFSSA 81 >gi|326441740|ref|ZP_08216474.1| C-5 cytosine-specific DNA methylase [Streptomyces clavuligerus ATCC 27064] Length = 187 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 I L G GG+ L ++ R + ++ P + + ++P GDI+ + D Sbjct: 13 IGSLCSGYGGLDLGVQSVLGGRMA---WHADTAPGASRILARHWPGVPNLGDISVVSWAD 69 Query: 64 IPDHDVLLAGFPCQ 77 + VL AGFPCQ Sbjct: 70 VQGVCVLTAGFPCQ 83 >gi|291557370|emb|CBL34487.1| Site-specific DNA methylase [Eubacterium siraeum V10Sc8a] Length = 361 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIG L + + ++SEI + + +FP+ + GDI K+ Sbjct: 4 IKLGSLFDGIGVFPLAASRC----GIRPAWASEIEKAPISITKRHFPDMVHLGDITKVDG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP V+ G PCQ S G Sbjct: 60 GKIPPVHVITFGSPCQNLSLIG 81 >gi|224036442|pdb|3G7U|A Chain A, Crystal Structure Of Putative Dna Modification Methyltransferase Encoded Within Prophage Cp-933r (E.Coli) Length = 376 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 14/91 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 L + DLF G+GG+ L + + + EI+ +++ T+ NFP +L + D++ + Sbjct: 3 LNVIDLFSGVGGLSLGAARA----GFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLN 58 Query: 61 TQ--------DIPDHDVLLAGFPCQPFSQAG 83 + D+P D ++ G PCQ FS G Sbjct: 59 AEIIKGFFKNDMP-IDGIIGGPPCQGFSSIG 88 >gi|189350232|ref|YP_001945860.1| DNA (cytosine-5-)-methyltransferase [Burkholderia multivorans ATCC 17616] gi|189334254|dbj|BAG43324.1| DNA (cytosine-5-)-methyltransferase [Burkholderia multivorans ATCC 17616] Length = 380 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%) Query: 31 FSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 F SEI P+ ++P+ GD+ K D+L+ G PCQ FS AG Sbjct: 28 FVSEIEPFPCAVLAHHYPSVPNLGDMTNFKEWPDAAIDLLVGGTPCQSFSVAG 80 >gi|328543334|ref|YP_004303443.1| DNA methylase, C-5 cytosine-specific family [polymorphum gilvum SL003B-26A1] gi|326415695|gb|ADZ72758.1| DNA methylase, C-5 cytosine-specific family [Polymorphum gilvum SL003B-26A1] Length = 418 Score = 39.7 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 13/88 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT 61 + DLF G GG+ + F ++++P + +T++ NFP F G ++K+ Sbjct: 23 RCVDLFAGAGGLAVG----FRSAGWGIVAGNDVDPDAAQTFRLNFPEASFFEGPVSKLAA 78 Query: 62 QDI--------PDHDVLLAGFPCQPFSQ 81 ++ D D L+ G PCQ FS Sbjct: 79 DELLADCGIERGDLDCLVGGPPCQSFSH 106 >gi|228478248|ref|ZP_04062856.1| modification methylase Sau3AI [Streptococcus salivarius SK126] gi|228249927|gb|EEK09197.1| modification methylase Sau3AI [Streptococcus salivarius SK126] Length = 424 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-----SVKTYQANFPNTLIFGDI 56 + + +LF G+GG R+ LE N +S++ P + + Y +FP++ + Sbjct: 1 MNVLELFAGVGGFRIGLENA-NPDYFRTLWSNQWEPSRKSQDAFEVYNYHFPDS----EN 55 Query: 57 AKIKTQDIPDH-------DVLLAGFPCQPFSQA 82 I DI D D+++ GFPCQ +S A Sbjct: 56 INISIADITDEQFAEMNADMIVGGFPCQDYSVA 88 >gi|325270471|ref|ZP_08137073.1| modification methylase DdeI [Prevotella multiformis DSM 16608] gi|324987194|gb|EGC19175.1| modification methylase DdeI [Prevotella multiformis DSM 16608] Length = 398 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 11/87 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 + DLFCG GG+ E+ + ++ ++ TYQ N + + D++ I + Sbjct: 57 VLDLFCGCGGMSYGFEKA----GFDVLLGIDVWKDALVTYQHNHRSGGVLCADLSVITGK 112 Query: 63 DIPDH------DVLLAGFPCQPFSQAG 83 ++ H DV++ G PCQ FS AG Sbjct: 113 EVGQHLGGKQVDVIIGGPPCQGFSVAG 139 >gi|261339110|ref|ZP_05966968.1| hypothetical protein ENTCAN_05324 [Enterobacter cancerogenus ATCC 35316] gi|288318947|gb|EFC57885.1| modification methylase HgiDII [Enterobacter cancerogenus ATCC 35316] Length = 355 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 13/90 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 M K DLFCG GG+ L+Q N E + E N + +T++AN +F DI I Sbjct: 1 MFKAIDLFCGGGGLTEGLKQA----NFEVISAVENNISAAETFKANNRKCHLFQEDIRFI 56 Query: 60 KTQDIPDHD-------VLLAGF-PCQPFSQ 81 +Q+I D LLAG PCQ FS Sbjct: 57 SSQEIMDKVGIKSGELSLLAGCPPCQGFSS 86 >gi|160881053|ref|YP_001560021.1| DNA-cytosine methyltransferase [Clostridium phytofermentans ISDg] gi|160429719|gb|ABX43282.1| DNA-cytosine methyltransferase [Clostridium phytofermentans ISDg] Length = 537 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +K+ D FCG GG + F + F+ + +V TY+AN P +I D+ +I Sbjct: 1 MKVADFFCGAGG----FSEGFRQAGFDIVFAVDKWLPAVNTYKANKPMVNVIQDDVIRIS 56 Query: 61 T-------QDIPDHDVLLAGFPCQPFSQA 82 + +PD +V++ PC FS + Sbjct: 57 NLPDEEFEKLVPDTEVIIGSPPCVAFSNS 85 >gi|157961098|ref|YP_001501132.1| DNA-cytosine methyltransferase [Shewanella pealeana ATCC 700345] gi|157846098|gb|ABV86597.1| DNA-cytosine methyltransferase [Shewanella pealeana ATCC 700345] Length = 406 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 16/91 (17%) Query: 4 ITDLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKIK 60 + LF G GG+ + L E F +R S EI+ + KT + N P+ + GDI K+ Sbjct: 1 MISLFSGAGGLDIGLCEAGFTNR-----LSVEIDEDAQKTLKLNQPSLKLATPGDIHKLT 55 Query: 61 TQDI-------PDHDVLLAGFP-CQPFSQAG 83 ++ P LLAG P CQPFS++G Sbjct: 56 PSELLRQSGLQPKELTLLAGGPPCQPFSKSG 86 >gi|320094594|ref|ZP_08026360.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. oral taxon 178 str. F0338] gi|319978509|gb|EFW10086.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. oral taxon 178 str. F0338] Length = 365 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 15/91 (16%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61 +I LF G GG+ L +Q F+ +++P +++T++ NF +T+ + D+ ++ + Sbjct: 36 RIVSLFSGAGGLDLGFQQA----GFPLSFAVDLSPAAIETHRRNFQDTVAVEADLTELGS 91 Query: 62 QDIPDHDV----------LLAGFPCQPFSQA 82 + +H ++ G PCQ FS+A Sbjct: 92 DGVLEHLAPILEPGESIGVIGGPPCQGFSRA 122 >gi|303239111|ref|ZP_07325641.1| C-5 cytosine-specific DNA methylase [Acetivibrio cellulolyticus CD2] gi|302593449|gb|EFL63167.1| C-5 cytosine-specific DNA methylase [Acetivibrio cellulolyticus CD2] Length = 632 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L N + ++SEI P+ ++ P +GDI KI Sbjct: 5 LTLGSLFDGSGG--FPLGALLN--GIVPIWASEIEPFPIRVTTKRLPFVKHYGDIRKING 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +I D++ G PC S AG Sbjct: 61 AEIEPVDIITFGSPCTDMSVAG 82 >gi|9632084|ref|NP_048873.1| hypothetical protein PBCV1_A517L [Paramecium bursaria Chlorella virus 1] gi|1620188|gb|AAC96884.1| M.CviAII cytosine DNA methyltransferase [Paramecium bursaria Chlorella virus 1] Length = 344 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 8/85 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFS-SEINPYSVKTYQANFPNTLIFGDIAKI 59 ML+ DLF GIGGI T+ R + + E N + Q +P+ +F D+ Sbjct: 1 MLRALDLFSGIGGI------TYGLRGIVTPIAYVEKNEDARGFLQRKYPDVPVFDDVCTF 54 Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83 + D++ AG+PC FS AG Sbjct: 55 DAIEWKGKVDIITAGWPCTGFSTAG 79 >gi|296329951|ref|ZP_06872435.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676676|ref|YP_003868348.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. spizizenii str. W23] gi|296152990|gb|EFG93855.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414920|gb|ADM40039.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. spizizenii str. W23] Length = 488 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 9/90 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANF-PNTLIFGDI-- 56 L++ DLF G GG Q NH N+ E + EIN + T + + +I GDI Sbjct: 5 LRVLDLFAGGGGFSTGFLQA-NHPNLKFEIIRAVEINQAASDTLRGHLGSEKVIQGDITN 63 Query: 57 AKIKT---QDIPDHDVLLAGFPCQPFSQAG 83 + +K Q D DV++ G PCQ FS AG Sbjct: 64 SDVKKEIFQSCGDIDVVIGGPPCQTFSLAG 93 >gi|125718611|ref|YP_001035744.1| modification methylase [Streptococcus sanguinis SK36] gi|125498528|gb|ABN45194.1| Modification methylase, putative [Streptococcus sanguinis SK36] Length = 408 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 2/35 (5%) Query: 49 NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 N L+ DI+++ +QD+PD D+L FPCQ S +G Sbjct: 100 NNLV--DISEVHSQDLPDADILTYSFPCQDLSVSG 132 >gi|197124335|ref|YP_002136286.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K] gi|196174184|gb|ACG75157.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K] Length = 508 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 19/92 (20%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--------PNTLIFGDIA 57 DLFCG GG L F + +I+ + +TY+ NF P+ L GD+ Sbjct: 10 DLFCGAGGFSLG----FRAAGALSLAAVDIDEVAARTYRRNFGKLQPGMAPHVLS-GDLG 64 Query: 58 KIKTQDIPD--H----DVLLAGFPCQPFSQAG 83 ++ D+ H D+L+ G PCQ FS+ G Sbjct: 65 NLEEIDLGSIVHERTLDILIGGPPCQGFSRIG 96 >gi|223995915|ref|XP_002287631.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220976747|gb|EED95074.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 319 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Query: 52 IFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 I GDI ++ P D D+L+AGFPCQPFS G Sbjct: 218 IHGDIYEVPDSAFPKDLDLLVAGFPCQPFSTLG 250 >gi|269941524|emb|CBI49922.1| phage C-5 cytosine-specific DNA methylase [Staphylococcus aureus subsp. aureus TW20] Length = 332 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+K+ +LF G+G + L + F + + N + GD+ + Sbjct: 1 MIKVLELFSGVGSFSISLNTLGIEHEIVGFSETRKTATQLFCKLHNKKESENLGDVRNVS 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +D+ D D+L+ G PCQ F++AG Sbjct: 61 AKDL-DVDLLVFGSPCQSFTRAG 82 >gi|186683285|ref|YP_001866481.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] gi|186465737|gb|ACC81538.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] Length = 419 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 17/90 (18%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIP 65 LF G+GG L F E + + NP ++ TYQ NFP+ T++ DI ++ ++I Sbjct: 14 LFSGVGGFDLG----FKAAGFEIAIAIDNNPIALATYQHNFPHATVLCKDIREVTGEEIR 69 Query: 66 --------DHD----VLLAGFPCQPFSQAG 83 D D + G PCQ FS AG Sbjct: 70 ACIQAKYGDWDGEIHTVFDGPPCQGFSVAG 99 >gi|254465219|ref|ZP_05078630.1| modification methylase XorII [Rhodobacterales bacterium Y4I] gi|206686127|gb|EDZ46609.1| modification methylase XorII [Rhodobacterales bacterium Y4I] Length = 437 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 DLF G GG+ L EQ + + E++P ++ NFP +I + + D+ Sbjct: 8 DLFSGAGGMSLGFEQA----GFDIVAAVELDPVHAAVHKYNFPECAVIPNSVTDVSGADV 63 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 + DV+ G PCQ FS G Sbjct: 64 REAAGIGNKTVDVVFGGAPCQGFSLIG 90 >gi|297380299|gb|ADI35186.1| DNA-cytosine methyltransferase [Helicobacter pylori v225d] Length = 264 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 16/26 (61%), Positives = 20/26 (76%) Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 +IK D+PD DVL++GFPCQ FS G Sbjct: 2 RIKPNDLPDFDVLISGFPCQAFSING 27 >gi|266624606|ref|ZP_06117541.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM 13479] gi|288863534|gb|EFC95832.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM 13479] Length = 434 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGG + ++SE+ P ++ + + P + GDI K+ + +P Sbjct: 9 LFDGIGG----FPYAALFYGIRPVWASEVLPTAISVTKRHIPEMVHVGDITKLDGRKLPP 64 Query: 67 HDVLLAGFPCQPFSQAG 83 D++ G PCQ S +G Sbjct: 65 VDIITFGSPCQGLSISG 81 >gi|239624264|ref|ZP_04667295.1| DNA-cytosine methyltransferase [Clostridiales bacterium 1_7_47_FAA] gi|239520650|gb|EEQ60516.1| DNA-cytosine methyltransferase [Clostridiales bacterium 1_7_47FAA] Length = 470 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGG + ++SE+ P ++ + + P + GDI K+ + +P Sbjct: 45 LFDGIGG----FPYAALFYGIRPVWASEVLPTAISVTKRHIPEMVHVGDITKLDGRKLPP 100 Query: 67 HDVLLAGFPCQPFSQAG 83 D++ G PCQ S +G Sbjct: 101 VDIITFGSPCQGLSISG 117 >gi|326790943|ref|YP_004308764.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427] gi|326541707|gb|ADZ83566.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427] Length = 292 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF GI + LE+ V+ +++SEI S+K + N+P + GDI I T Sbjct: 1 MNVLSLFDGISCGMVALERA--GIKVDNYYASEIEQDSIKISKKNYPWIIQLGDITNI-T 57 Query: 62 QDIPDH----DVLLAGFPCQPFS 80 +++ D D+++ G PCQ S Sbjct: 58 KEMLDTIMPIDIVIGGSPCQDLS 80 >gi|317180612|dbj|BAJ58398.1| Type II modification enzyme [Helicobacter pylori F32] Length = 327 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L E+ V + I P TY+ N NT L+ DI ++ Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKIVVANEYDKNITP----TYRLNHKNTQLLEKDIKNLQ 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 T +I D ++ G PCQ +S+AG Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80 >gi|217034513|ref|ZP_03439924.1| hypothetical protein HP9810_873g29 [Helicobacter pylori 98-10] gi|216943054|gb|EEC22533.1| hypothetical protein HP9810_873g29 [Helicobacter pylori 98-10] Length = 327 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L E+ V + I P TY+ N NT L+ DI ++ Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKIVVANEYDKNITP----TYRLNHKNTQLLEKDIKNLQ 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 T +I D ++ G PCQ +S+AG Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80 >gi|13096616|pdb|1G55|A Chain A, Structure Of Human Dnmt2, An Enigmatic Dna Methyltransferase Homologue Length = 343 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L++ +L+ G+GG+ L ++ V + ++N + + Y+ NFP+T + + Sbjct: 3 LRVLELYSGVGGMHHALRESCIPAQVVA--AIDVNTVANEVYKYNFPHTQLLAKTIEGIT 60 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D D++L PCQPF++ G Sbjct: 61 LEEFDRLSFDMILMSPPCQPFTRIG 85 >gi|308063355|gb|ADO05242.1| site-specific DNA methyltransferase [Helicobacter pylori Sat464] Length = 327 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L E+ V + I P TY+ N NT L+ DI ++ Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKIVVANEYDKNITP----TYRLNHKNTQLLEKDIKNLQ 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 T +I D ++ G PCQ +S+AG Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80 >gi|217033005|ref|ZP_03438476.1| hypothetical protein HPB128_151g1 [Helicobacter pylori B128] gi|298736554|ref|YP_003729080.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] gi|216945262|gb|EEC23940.1| hypothetical protein HPB128_151g1 [Helicobacter pylori B128] gi|298355744|emb|CBI66616.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] Length = 327 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L E+ V + I P TY+ N NT L+ DI ++ Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKIVVANEYDKNITP----TYRLNHKNTQLLEKDIKNLQ 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 T +I D ++ G PCQ +S+AG Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80 >gi|188527304|ref|YP_001909991.1| site-specific DNA methyltransferase [Helicobacter pylori Shi470] gi|188143544|gb|ACD47961.1| site-specific DNA methyltransferase [Helicobacter pylori Shi470] Length = 327 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L E+ V + I P TY+ N NT L+ DI ++ Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKIVVANEYDKNITP----TYRLNHKNTRLLEKDIKNLQ 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 T +I D ++ G PCQ +S+AG Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80 >gi|296393591|ref|YP_003658475.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985] gi|296180738|gb|ADG97644.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985] Length = 372 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%) Query: 34 EINPYSVKTYQANFPNT-LIFGDIAKIKTQDIP---DHDVLLAGFPCQPFSQAG 83 E + + T +ANFP+T +I GD+ + +I + D++ G PCQPFS AG Sbjct: 33 EFDKNACATLRANFPDTPVIEGDVRGVDWSEIAAPGETDLVAGGPPCQPFSLAG 86 >gi|288932478|ref|YP_003436538.1| DNA-cytosine methyltransferase [Ferroglobus placidus DSM 10642] gi|288894726|gb|ADC66263.1| DNA-cytosine methyltransferase [Ferroglobus placidus DSM 10642] Length = 301 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI D+F G GG + F E + + ++V TY+ANF + D+ Sbjct: 1 MKIADIFAGAGG----FARGFVEEKFEVVVAVDSFKHAVNTYKANFDADVFQVDVKNFSG 56 Query: 62 QDIPDHDV--LLAGFPCQPFSQA 82 + + D+ V ++A PC+ F++A Sbjct: 57 KMLKDYGVEMIIASPPCEAFTKA 79 >gi|315586485|gb|ADU40866.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A] gi|317178791|dbj|BAJ56579.1| Type II modification enzyme [Helicobacter pylori F30] Length = 327 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L E+ V + I P TY+ N NT L+ DI ++ Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKIVVANEYDKNITP----TYRLNHKNTQLLEKDIKNLQ 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 T +I D ++ G PCQ +S+AG Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80 >gi|240142445|ref|YP_002966955.1| putative site-specific DNA-methyltransferase [Methylobacterium extorquens AM1] gi|240012389|gb|ACS43614.1| putative site-specific DNA-methyltransferase [Methylobacterium extorquens AM1] Length = 335 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 8/87 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + DLF GIGGI L LE+ R + F + + + ++P+ I D+ + Sbjct: 8 LTVLDLFSGIGGISLGLERAGPFRTIA--FCEALEARR-RILRRHWPDVPIHDDVRTLDG 64 Query: 62 QDI-----PDHDVLLAGFPCQPFSQAG 83 + DV+ GFPCQ S AG Sbjct: 65 RSFGAGSSRSVDVICGGFPCQDISLAG 91 >gi|171184904|ref|YP_001793823.1| DNA-cytosine methyltransferase [Thermoproteus neutrophilus V24Sta] gi|170934116|gb|ACB39377.1| DNA-cytosine methyltransferase [Thermoproteus neutrophilus V24Sta] Length = 462 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 18/92 (19%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------------P 48 + LF G GG+ L Q+ +R F++++ ++ TY N P Sbjct: 6 VVSLFSGAGGLDLGFVQSGRYR---MLFANDVLSSALTTYAKNLDLKLELCSSRRTEARP 62 Query: 49 NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80 + D+A++ + D DV++ G PCQ FS Sbjct: 63 GVALVCDVAEVDFAPLGDVDVIVGGPPCQDFS 94 >gi|291528318|emb|CBK93904.1| DNA-methyltransferase (dcm) [Eubacterium rectale M104/1] Length = 344 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 15/93 (16%) Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK 58 M +LF G GG+ L +E+ FN + E + + T + N PN +I DIA Sbjct: 1 MYTSIELFAGAGGLALGVEKAGFNTLGL-----IEFDKDAADTLKKNRPNWNVINDDIAN 55 Query: 59 IKTQDIPDH--------DVLLAGFPCQPFSQAG 83 I D+ + D+L G PCQ FS AG Sbjct: 56 ISCLDLEKYFSIKKGELDLLSGGAPCQAFSYAG 88 >gi|218135211|ref|ZP_03464015.1| hypothetical protein BACPEC_03116 [Bacteroides pectinophilus ATCC 43243] gi|217990596|gb|EEC56607.1| hypothetical protein BACPEC_03116 [Bacteroides pectinophilus ATCC 43243] Length = 344 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 15/93 (16%) Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK 58 M +LF G GG+ L +E+ FN + E + + T + N PN +I DIA Sbjct: 1 MYTSIELFAGAGGLALGVEKAGFNTLGL-----IEFDKDAADTLKKNRPNWNVINDDIAN 55 Query: 59 IKTQDIPDH--------DVLLAGFPCQPFSQAG 83 I D+ + D+L G PCQ FS AG Sbjct: 56 ISCLDLEKYFSIKKGELDLLSGGAPCQAFSYAG 88 >gi|207091855|ref|ZP_03239642.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori HPKX_438_AG0C1] Length = 109 Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAK--- 58 KI DLFCG GG LE + + + + ++ T++ N N + ++GDI + Sbjct: 4 KILDLFCGAGGFSAGLECL---KEFDALIGLDCDKQALITFENNHKNAIGVYGDITQTEI 60 Query: 59 ----IKTQDIPDHDVLLAGFPCQPFSQAG 83 IK + ++++ G PCQ FS G Sbjct: 61 KEKVIKLAQKLEINMIIGGPPCQGFSNKG 89 >gi|168018932|ref|XP_001761999.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686716|gb|EDQ73103.1| predicted protein [Physcomitrella patens subsp. patens] Length = 970 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQ---TFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 L + LF G+GGI L + F+ +SSE+ +++ ++ P GDI K Sbjct: 354 LVVLSLFDGLGGIWQALTKLGIPFSG------YSSEVLAPAIQVVKSRHPRVKHVGDIRK 407 Query: 59 IKTQDIPDH-DVLLAGFPCQPFSQAG 83 + +P+ D+++ GFPCQ S G Sbjct: 408 LNLSAVPEKVDLVVGGFPCQDLSIMG 433 >gi|325685533|gb|EGD27624.1| modification methylase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 395 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 24/49 (48%) Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + P +K A T DI K+ D+PD D+L FPCQ S AG Sbjct: 70 MTPVQLKRILAAINRTNNLVDITKVHATDLPDGDILTYSFPCQDLSIAG 118 >gi|254470861|ref|ZP_05084264.1| DNA-cytosine methyltransferase [Pseudovibrio sp. JE062] gi|211960003|gb|EEA95200.1| DNA-cytosine methyltransferase [Pseudovibrio sp. JE062] Length = 498 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 18/95 (18%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFG---DIAK 58 ++ DLF G GG+ L F+ + E + E++P++ +++ NF P DI Sbjct: 19 RVLDLFAGCGGLSLG----FHSKGFEIAGAVELDPHAARSHGMNFHPGLETHAQPVDITS 74 Query: 59 IKTQDIP--------DH--DVLLAGFPCQPFSQAG 83 + +++ DH D+++ G PCQ F++ G Sbjct: 75 VGPEELAKKLSLGDTDHAIDIIIGGPPCQAFARVG 109 >gi|293392447|ref|ZP_06636769.1| site-specific DNA methylase [Serratia odorifera DSM 4582] gi|291425101|gb|EFE98308.1| site-specific DNA methylase [Serratia odorifera DSM 4582] Length = 379 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 5/79 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKTQDI 64 + F GIG R +EQ ++ ++++ + Y+ ++ + L+ DI +K++D+ Sbjct: 16 EFFAGIGLSRAGMEQA----GIKTIWANDYDQNKKSMYEGHWKSHELLLADIHALKSEDL 71 Query: 65 PDHDVLLAGFPCQPFSQAG 83 P DV A PC S AG Sbjct: 72 PAADVAWASSPCTDLSLAG 90 >gi|225377327|ref|ZP_03754548.1| hypothetical protein ROSEINA2194_02974 [Roseburia inulinivorans DSM 16841] gi|225210858|gb|EEG93212.1| hypothetical protein ROSEINA2194_02974 [Roseburia inulinivorans DSM 16841] Length = 361 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIG L + + ++SEI + + +FP+ GDI K+ Sbjct: 4 IKLGSLFDGIGVFPLAASRC----GIRPVWASEIEKAPISITKRHFPDMAHLGDITKVDG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP V+ G PCQ S G Sbjct: 60 GKIPPVHVITFGSPCQNLSLIG 81 >gi|294667855|ref|ZP_06733064.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602358|gb|EFF45800.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 410 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 13/84 (15%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDI 64 DLF G GG L + +++EI+P +TY N P T + DI K+ + + Sbjct: 15 DLFAGAGG----LSEGLREAGFTSLYANEISPRYAQTYAVNHPGTQVDSQDIRKVDARKV 70 Query: 65 P--------DHDVLLAGFPCQPFS 80 + D++ G PCQ FS Sbjct: 71 RKLLGLKRGELDLIAGGPPCQGFS 94 >gi|297621903|ref|YP_003710040.1| C-5 cytosine-specific DNA methylase [Waddlia chondrophila WSU 86-1044] gi|297377204|gb|ADI39034.1| C-5 cytosine-specific DNA methylase [Waddlia chondrophila WSU 86-1044] Length = 410 Score = 38.9 bits (89), Expect = 0.20, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 33 SEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +EI+ S T + N P+ +I GDI I + D L GFPCQ FS AG Sbjct: 104 NEIDKSSCMTLRKNRPSWNVIEGDIKSIDFRQFKGIDFLSGGFPCQAFSYAG 155 >gi|302520934|ref|ZP_07273276.1| phage DNA methylase [Streptomyces sp. SPB78] gi|302429829|gb|EFL01645.1| phage DNA methylase [Streptomyces sp. SPB78] Length = 190 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 5/71 (7%) Query: 18 LEQTFNH-RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLA 72 L+Q H + +E +P + + A P+ GDI + Q ++P L A Sbjct: 23 LDQAVEHVTGLTTVAVAEKDPAASRLLAARVPHARNLGDITAVDWQHVAAELPRPAALTA 82 Query: 73 GFPCQPFSQAG 83 GFPCQ S AG Sbjct: 83 GFPCQDISNAG 93 >gi|225386628|ref|ZP_03756392.1| hypothetical protein CLOSTASPAR_00376 [Clostridium asparagiforme DSM 15981] gi|225047326|gb|EEG57572.1| hypothetical protein CLOSTASPAR_00376 [Clostridium asparagiforme DSM 15981] Length = 340 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 12/91 (13%) Query: 1 MLKIT--DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI-- 56 M K+T LF GIGG+ L E +C ++ P+SV + A +P+ F DI Sbjct: 1 MNKLTHVSLFSGIGGLDLAAEAAGFETVCQCEWAD--FPHSVLS--ARWPDVPRFRDITT 56 Query: 57 ----AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 A + + V+ GFPCQPFS AG Sbjct: 57 FTKEAFFEKTGLETVTVISGGFPCQPFSTAG 87 >gi|291402254|ref|XP_002717405.1| PREDICTED: tRNA aspartic acid methyltransferase 1 [Oryctolagus cuniculus] Length = 367 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L++ +L+ GIGG+ L+++ V + ++N + + Y+ NFP+TL+ + Sbjct: 4 LRVLELYSGIGGMHHALKESCVPAQV--VAAIDVNTVANEVYEYNFPHTLLLAKTIEGIT 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQ 81 ++ D +++L PCQPF++ Sbjct: 62 LEEFDKLSFNMILMSPPCQPFTR 84 >gi|255279956|ref|ZP_05344511.1| modification methylase AgeI [Bryantella formatexigens DSM 14469] gi|255269729|gb|EET62934.1| modification methylase AgeI [Bryantella formatexigens DSM 14469] Length = 475 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 13/89 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIAK 58 ++ DLFCG GG+ L F +++I V TY N P +I GDI Sbjct: 103 RLVDLFCGAGGLSLG----FVQEGFAVSLANDIEECCVDTYAHNHPEVPESHIIRGDIHD 158 Query: 59 IKTQ---DIPDH--DVLLAGFPCQPFSQA 82 + + + D D+++ G PCQ FS A Sbjct: 159 VAGELDDLLADRRVDIVIGGPPCQGFSMA 187 >gi|114629600|ref|XP_001151907.1| PREDICTED: DNA methyltransferase 2 isoform 5 [Pan troglodytes] gi|332833684|ref|XP_001151840.2| PREDICTED: tRNA (cytosine-5-)-methyltransferase isoform 4 [Pan troglodytes] gi|29126973|gb|AAH47733.1| TRNA aspartic acid methyltransferase 1 [Homo sapiens] Length = 391 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L++ +L+ G+GG+ L ++ V + ++N + + Y+ NFP+T + + Sbjct: 4 LRVLELYSGVGGMHHALRESCIPAQVVA--AIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D D++L PCQPF++ G Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIG 86 >gi|2895945|gb|AAC39764.1| putative DNA cytosine methyltransferase DNMT2 [Homo sapiens] Length = 391 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L++ +L+ G+GG+ L ++ V + ++N + + Y+ NFP+T + + Sbjct: 4 LRVLELYSGVGGMHHALRESCIPAQVVA--AIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D D++L PCQPF++ G Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIG 86 >gi|4758184|ref|NP_004403.1| tRNA (cytosine-5-)-methyltransferase [Homo sapiens] gi|17374834|sp|O14717|TRDMT_HUMAN RecName: Full=tRNA (cytosine-5-)-methyltransferase; AltName: Full=DNA (cytosine-5)-methyltransferase-like protein 2; Short=Dnmt2; AltName: Full=DNA methyltransferase homolog HsaIIP; Short=DNA MTase homolog HsaIIP; Short=M.HsaIIP; AltName: Full=PuMet gi|2627431|gb|AAC51939.1| putative DNA methyltransferase [Homo sapiens] gi|2894544|emb|CAA11272.1| DNA methyltransferase [Homo sapiens] gi|7576230|emb|CAB87964.1| tRNA aspartic acid methyltransferase 1 [Homo sapiens] gi|47496579|emb|CAG29312.1| DNMT2 [Homo sapiens] gi|119606623|gb|EAW86217.1| hCG23994, isoform CRA_a [Homo sapiens] gi|158256270|dbj|BAF84106.1| unnamed protein product [Homo sapiens] gi|167887559|gb|ACA05983.1| tRNA aspartic acid methyltransferase 1 variant 3 [Homo sapiens] gi|167887563|gb|ACA05987.1| tRNA aspartic acid methyltransferase 1 variant 4 [Homo sapiens] Length = 391 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L++ +L+ G+GG+ L ++ V + ++N + + Y+ NFP+T + + Sbjct: 4 LRVLELYSGVGGMHHALRESCIPAQVVA--AIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D D++L PCQPF++ G Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIG 86 >gi|323138162|ref|ZP_08073235.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242] gi|322396624|gb|EFX99152.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242] Length = 381 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 29 CFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83 C F+++ + ++Y+AN+ + GD+ +I T +P D++ A FPCQ S AG Sbjct: 27 CLFANDFDRKKAESYRANWGGGEMHVGDVREITTAQLPGRADLVWASFPCQDLSLAG 83 >gi|325696380|gb|EGD38271.1| modification methylase HgiDII [Streptococcus sanguinis SK160] Length = 358 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDI 64 DLF G GG L+++ + + EI+P +VKTY+ N P + DI + +I Sbjct: 8 DLFSGAGGTTSGLKKS----GINVQVAIEIDPVAVKTYKLNNPEVYVIDRDIKLVSGDEI 63 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 H +L+A PCQ FS G Sbjct: 64 KQHLKIGSDDKVMLVACPPCQGFSTIG 90 >gi|297812763|ref|XP_002874265.1| DNA methyltransferase-2 [Arabidopsis lyrata subsp. lyrata] gi|297320102|gb|EFH50524.1| DNA methyltransferase-2 [Arabidopsis lyrata subsp. lyrata] Length = 383 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 3 KITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ + + GIGG+R L + VE F EIN + YQ NF + G+I + Sbjct: 16 RVLEFYSGIGGMRYSLMASGVVAEVVEAF---EINDSANDVYQHNFKHRPYQGNIQSLTA 72 Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83 D+ + D L PCQP+++ G Sbjct: 73 VDLDKYNADAWLLSPPCQPYTRQG 96 >gi|77465763|ref|YP_355266.1| cytosine-specific DNA methylase [Rhodobacter sphaeroides 2.4.1] gi|77390181|gb|ABA81365.1| Cytosine-specific DNA methylase [Rhodobacter sphaeroides 2.4.1] Length = 443 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDI 64 DLF G GG+ L EQ + + EI+P ++ NFP+T +I + + ++I Sbjct: 7 DLFAGAGGLSLGFEQA----GFDVAAAVEIDPVHCAVHKFNFPDTAVIPRSVVGLTAEEI 62 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 + D + G PCQ FS G Sbjct: 63 RESAGIGNRPIDCVFGGPPCQGFSLIG 89 >gi|169826094|ref|YP_001696252.1| modification methylase BsuRI [Lysinibacillus sphaericus C3-41] gi|168990582|gb|ACA38122.1| Modification methylase BsuRI [Lysinibacillus sphaericus C3-41] Length = 426 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 24/104 (23%) Query: 4 ITDLFCGIGGIRLDLE--------------------QTFN---HRNV-ECFFSSEINPYS 39 + LF G GG+ L E + F+ H++V +++++ + Sbjct: 61 VVGLFSGCGGLDLGFELAGLIAEIGEENAMTAFKNKEKFDEIRHKSVFNTIYTNDMFKEA 120 Query: 40 VKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +TY+ NFP+ +I + K + P +++L GFPC FS+AG Sbjct: 121 NETYKLNFPDHIIQHEKDIRKVANFPMCNLMLGGFPCPGFSEAG 164 >gi|315650253|ref|ZP_07903326.1| modification methylase BbvI [Eubacterium saburreum DSM 3986] gi|315487498|gb|EFU77807.1| modification methylase BbvI [Eubacterium saburreum DSM 3986] Length = 349 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%) Query: 1 MLKITDLFCGIGGIRLD-LEQTFNHRNVECF--FSSEINPYSVKTYQANF----PNTLIF 53 + ++ +LFCG GGI + + N+ N ++++ + + KTY+ N P T+ Sbjct: 2 IFRLGELFCGPGGIGWGAINASINNPNYRIIHQWANDYDESTCKTYRYNICPNAPETVYH 61 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI + D L GFPC +S G Sbjct: 62 ADIRTFDMSQLAPIDALAFGFPCNDYSVVG 91 >gi|114629608|ref|XP_001151654.1| PREDICTED: DNA methyltransferase 2 isoform 1 [Pan troglodytes] Length = 377 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L++ +L+ G+GG+ L ++ V + ++N + + Y+ NFP+T + + Sbjct: 4 LRVLELYSGVGGMHHALRESCIPAQVVA--AIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D D++L PCQPF++ G Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIG 86 >gi|320321292|gb|EFW77421.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea str. B076] Length = 410 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 13/84 (15%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDI 64 DLF G GG L + +++EI+P +TY AN P+T + DI ++ + + Sbjct: 15 DLFAGAGG----LSEGLREAGFTSLYANEISPRYAQTYGANHPSTHVDNQDIREVDARKV 70 Query: 65 P--------DHDVLLAGFPCQPFS 80 + D++ G PCQ FS Sbjct: 71 RKSLGLKRGELDLIAGGPPCQGFS 94 >gi|119511191|ref|ZP_01630308.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414] gi|119464179|gb|EAW45099.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414] Length = 432 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDI 64 DLF G GG+ L EQ + S EI+P T++ NFP + + + +Q+I Sbjct: 10 DLFAGAGGMTLGFEQA----GFDVLASVEIDPIHCATHEFNFPFWRVLCKPVEETTSQEI 65 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 DV+ G PCQ FS G Sbjct: 66 RQSSSIGDREIDVVFGGPPCQGFSLIG 92 >gi|291618481|ref|YP_003521223.1| Bsp6IM [Pantoea ananatis LMG 20103] gi|291153511|gb|ADD78095.1| Bsp6IM [Pantoea ananatis LMG 20103] Length = 384 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 5/79 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDI 64 + F GIG R +EQ ++ ++++ + Y+ ++ + + DI +K++++ Sbjct: 16 EFFAGIGLARAGMEQA----GIKTVWANDYDVNKKAMYEGHWQSADFLLADIHSLKSEEL 71 Query: 65 PDHDVLLAGFPCQPFSQAG 83 PD DV A PC S AG Sbjct: 72 PDADVAWASSPCTDLSLAG 90 >gi|160873497|ref|YP_001552813.1| DNA-cytosine methyltransferase [Shewanella baltica OS195] gi|160859019|gb|ABX47553.1| DNA-cytosine methyltransferase [Shewanella baltica OS195] gi|315265725|gb|ADT92578.1| DNA-cytosine methyltransferase [Shewanella baltica OS678] Length = 385 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 24/96 (25%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------PNTLIFGD 55 +K DLF G GG+ L Q ++ + E++ + TY+AN P LI GD Sbjct: 1 MKAIDLFSGAGGLSLAAHQC----GIDVIAAIELDTAASITYRANLIEQLKAPTKLINGD 56 Query: 56 IAKIKTQDIP-----------DHDVLLAGFPCQPFS 80 I ++ D+P + ++LL G PCQ FS Sbjct: 57 INEV---DLPALMKELKLKSGELELLLGGPPCQGFS 89 >gi|86137701|ref|ZP_01056277.1| DNA modification methylase M.NGOI [Roseobacter sp. MED193] gi|85825293|gb|EAQ45492.1| DNA modification methylase M.NGOI [Roseobacter sp. MED193] Length = 319 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ML +L G GG L LE+ F+H + EI+ + T + N PN + + ++ Sbjct: 1 MLTSVELCAGAGGQALGLERAGFDHTAL-----VEIDKHCCATLRHNRPNWNVLEEDLRL 55 Query: 60 KTQDIPDH---DVLLAGFPCQPFSQAG 83 D + D+L G PC PFS AG Sbjct: 56 FKDDASAYKGIDLLAGGLPCPPFSVAG 82 >gi|331000405|ref|ZP_08324080.1| DNA (cytosine-5-)-methyltransferase [Parasutterella excrementihominis YIT 11859] gi|329571737|gb|EGG53417.1| DNA (cytosine-5-)-methyltransferase [Parasutterella excrementihominis YIT 11859] Length = 392 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 8/90 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHR-NVECFFSSEINPYSVKTYQANFPNTL------IFG 54 L + ++F G GGI L L QT + + + ++++ + + +TY+ N + I Sbjct: 31 LTVGEMFSGPGGIGLALNQTKRGKLSFKHLWATDYDSDTCETYRKNIFTGIHKEALSICK 90 Query: 55 DIAKIK-TQDIPDHDVLLAGFPCQPFSQAG 83 DI ++ +++P D L GFPC FS G Sbjct: 91 DIREVDIAKELPQADGFLYGFPCNDFSNVG 120 >gi|291301680|ref|YP_003512958.1| C-5 cytosine-specific DNA methylase [Stackebrandtia nassauensis DSM 44728] gi|290570900|gb|ADD43865.1| C-5 cytosine-specific DNA methylase [Stackebrandtia nassauensis DSM 44728] Length = 329 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%) Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 E + ++ +P + + P+ GDI +D D+L+AG PCQP S+AG Sbjct: 50 ELAWVADTDPDAARVLTHRHPHAPNLGDIRTAPWEDAEPVDILVAGVPCQPVSKAG 105 >gi|34451612|gb|AAQ72361.1| BsaWI methylase [Geobacillus stearothermophilus] Length = 411 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L I D F G GGI F E + E+ V+TY AN + +I DI + Sbjct: 5 LHIIDCFSGPGGIC----TGFRAAGFETLLAIELVESCVETYTANHKDVPVINKDIRDVT 60 Query: 61 TQDIPD------HDVLLAGFPCQPFSQAG 83 +++ D+L AG PC+ FS AG Sbjct: 61 EEEVKRIVGNRVVDILTAGMPCETFSTAG 89 >gi|321476287|gb|EFX87248.1| hypothetical protein DAPPUDRAFT_187425 [Daphnia pulex] Length = 341 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 ++I +L+ GIGG+ E + E FS +IN + Y+ NF T +I + Sbjct: 6 MRILELYSGIGGMHYAAE--LANVGAEVVFSVDINTSANAVYRHNFKQTNQQARNIESLS 63 Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83 ++I D+++ PCQPF++ G Sbjct: 64 AKEINKLRPDIIMMSPPCQPFTRVG 88 >gi|163941367|ref|YP_001646251.1| C-5 cytosine-specific DNA methylase [Bacillus weihenstephanensis KBAB4] gi|163863564|gb|ABY44623.1| C-5 cytosine-specific DNA methylase [Bacillus weihenstephanensis KBAB4] Length = 251 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DL GI GI + ++ EI ++ + N+PN IF D+ K+ Sbjct: 1 MKMLDLCSGIAGISM----AAGWAGIDTAAFCEIEEFNQSVLRKNYPNIPIFPDLYKLTK 56 Query: 62 Q-------DIPDHDVLLAGFPCQPFSQAG 83 Q D+ V+ AG+PCQ S G Sbjct: 57 QSLIDGGVDVDSIGVISAGYPCQGESLVG 85 >gi|327309192|ref|XP_003239287.1| hypothetical protein TERG_01268 [Trichophyton rubrum CBS 118892] gi|326459543|gb|EGD84996.1| hypothetical protein TERG_01268 [Trichophyton rubrum CBS 118892] Length = 622 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 9/81 (11%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDI 64 D FCG GG+ +Q ++ ++ + + ++ +Y+ANFP+ L ++A+ T + Sbjct: 320 DGFCGAGGVSRGAQQA----GLKLSWAFDKSESAINSYRANFPSCLTKHSEVAQFLTS-L 374 Query: 65 PDH---DVLLAGFPCQPFSQA 82 P DV+ PCQPFS A Sbjct: 375 PREILVDVMHVSPPCQPFSPA 395 >gi|156937913|ref|YP_001435709.1| DNA-cytosine methyltransferase [Ignicoccus hospitalis KIN4/I] gi|156566897|gb|ABU82302.1| DNA-cytosine methyltransferase [Ignicoccus hospitalis KIN4/I] Length = 315 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 9/82 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDI 64 DLF G GG L E E + + ++Y AN P L + D++K+ ++ I Sbjct: 7 DLFSGAGGFALGFEMA----GFEGVLGVDNDKAPARSYAANHPKALTLVEDVSKLSSKTI 62 Query: 65 P----DHDVLLAGFPCQPFSQA 82 D DV++ PC+P++ A Sbjct: 63 ERLVGDVDVVIGSPPCEPYTAA 84 >gi|237753192|ref|ZP_04583672.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis ATCC BAA-430] gi|229375459|gb|EEO25550.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis ATCC BAA-430] Length = 354 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 ++ DLFCG GG ++Q + E + + ++ T+ NFP +I GDI IK Sbjct: 7 RVLDLFCGAGGFSSGIDQ---NPYFETLLALDFEQSAINTFSHNFPKAQVICGDITDIKI 63 Query: 62 QDI-------PDHDVLLAGFPCQPFSQAG 83 ++ ++++ G PCQ FS G Sbjct: 64 KNTLIKQAKRLKVNMIIGGPPCQGFSLKG 92 >gi|15801798|ref|NP_287816.1| putative DNA modification methyltransferase encoded within prophage CP-933R [Escherichia coli O157:H7 EDL933] gi|15831207|ref|NP_309980.1| methyltransferase [Escherichia coli O157:H7 str. Sakai] gi|217329077|ref|ZP_03445157.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. TW14588] gi|12515382|gb|AAG56430.1|AE005370_3 putative DNA modification methyltransferase encoded within prophage CP-933R [Escherichia coli O157:H7 str. EDL933] gi|13361418|dbj|BAB35376.1| putative methyltransferase [Escherichia coli O157:H7 str. Sakai] gi|217317516|gb|EEC25944.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. TW14588] gi|323179669|gb|EFZ65230.1| modification methylase XorII [Escherichia coli 1180] gi|326343203|gb|EGD66970.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. 1044] Length = 383 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 14/91 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 + + DLF G+GG+ L + + + EI+ +++ T+ NFP +L + D++ + Sbjct: 1 MNVIDLFSGVGGLSLGAARA----GFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLN 56 Query: 61 TQ--------DIPDHDVLLAGFPCQPFSQAG 83 + D+P D ++ G PCQ FS G Sbjct: 57 AEIIKGFFKNDMP-IDGIIGGPPCQGFSSIG 86 >gi|91089179|ref|XP_974235.1| PREDICTED: similar to DNA cytosine-5 methyltransferase [Tribolium castaneum] Length = 579 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++I +L+ GIGG+ L+ + ++ + +INP + Y+ NFP+ L+ ++ + Sbjct: 251 MEILELYSGIGGMHWALKVSGVEGTIKA--AVDINPTANSVYKHNFPHINLLNRNVQSLT 308 Query: 61 TQDIPDHDV--LLAGFPCQPFSQAG 83 Q I V +L PCQPF++ G Sbjct: 309 PQFINKLGVNTILMSPPCQPFTRNG 333 >gi|323693680|ref|ZP_08107879.1| type II DNA modification methyltransferase [Clostridium symbiosum WAL-14673] gi|323502294|gb|EGB18157.1| type II DNA modification methyltransferase [Clostridium symbiosum WAL-14673] Length = 303 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 10/83 (12%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGGI L E +C E + ++ + ++P F DI + + + Sbjct: 9 LFSGIGGIDLAAEAAGFTTVCQC----EWADFPMEVLKKHWPQVPKFKDITTVTKEAFFE 64 Query: 67 HD------VLLAGFPCQPFSQAG 83 ++ GFPCQPFS AG Sbjct: 65 KTGRETTTLISGGFPCQPFSSAG 87 >gi|51892448|ref|YP_075139.1| site-specific DNA-methyltransferase [Symbiobacterium thermophilum IAM 14863] gi|51856137|dbj|BAD40295.1| site-specific DNA-methyltransferase [Symbiobacterium thermophilum IAM 14863] Length = 486 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 21/98 (21%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK-- 60 ++ DLF G GG+ L F E + E++P++ +++ NF F AK + Sbjct: 14 RVLDLFAGCGGLSLG----FQRAGFEILAAVEMDPHAARSHAINFHPGDRFDLHAKPRDI 69 Query: 61 TQDIPDH---------------DVLLAGFPCQPFSQAG 83 +Q+ PD D+++ G PCQ +++ G Sbjct: 70 SQEQPDQVLGELYPGERAEDLVDIIIGGPPCQAYARVG 107 >gi|227547415|ref|ZP_03977464.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212062|gb|EEI79958.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 433 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 24/105 (22%) Query: 2 LKITDLFCGIGGIRLDLE-------QTFNHR---NVECFFSSEINP-------YSVKTYQ 44 ++I +LF G+GG RL L+ F+ + + + ++++ P ++ + Y+ Sbjct: 13 IRIAELFAGVGGFRLGLDGYHDAAHPEFDMKPAGDFKTVWANQWEPNGQESKQFAWRCYE 72 Query: 45 ANF-PNTLIFGDIA------KIKTQDIPDHDVLLAGFPCQPFSQA 82 F + + DIA K + IP+ D+L+ GFPCQ +S A Sbjct: 73 KRFGEGSCVNEDIAVVLQEVKDGKRSIPEFDMLVGGFPCQDYSVA 117 >gi|303285424|ref|XP_003062002.1| DNA methyltransferase [Micromonas pusilla CCMP1545] gi|226456413|gb|EEH53714.1| DNA methyltransferase [Micromonas pusilla CCMP1545] Length = 338 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--IFGDIAKIKTQD 63 + +CG+GG+ L + V F ++NP++ TY NF + I ++A Sbjct: 16 EFYCGVGGLHYALLRARPDATVAAAF--DLNPHACDTYAFNFGDAARPIARNLASYPAAS 73 Query: 64 IPDH--DVLLAGFPCQPFSQAG 83 I H + L PCQPF++ G Sbjct: 74 IDAHAASLWLLSPPCQPFTRQG 95 >gi|198422315|ref|XP_002126359.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha [Ciona intestinalis] Length = 678 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ LF GI + L+Q ++ F +SEI+ +++ Q P + GDI K+ Sbjct: 386 IRVLSLFDGIATGVVALKQL--GLQIQKFVASEIDEAAIRLVQNRHPEVMHVGDITKLTD 443 Query: 62 QDIPDH---DVLLAGFPCQPFSQA 82 DI + D+++ G PC S A Sbjct: 444 DDITRYGPFDLVMGGSPCNDLSGA 467 >gi|23465149|ref|NP_695752.1| modification methylase Sau3AI [Bifidobacterium longum NCC2705] gi|189440221|ref|YP_001955302.1| site-specific DNA methylase [Bifidobacterium longum DJO10A] gi|23325769|gb|AAN24388.1| modification methylase Sau3AI [Bifidobacterium longum NCC2705] gi|189428656|gb|ACD98804.1| Site-specific DNA methylase [Bifidobacterium longum DJO10A] Length = 423 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 24/105 (22%) Query: 2 LKITDLFCGIGGIRLDLE-------QTFNHR---NVECFFSSEINP-------YSVKTYQ 44 ++I +LF G+GG RL L+ F+ + + + ++++ P ++ + Y+ Sbjct: 3 IRIAELFAGVGGFRLGLDGYHDAAHPEFDMKPAGDFKTVWANQWEPNGQESKQFAWRCYE 62 Query: 45 ANF-PNTLIFGDIA------KIKTQDIPDHDVLLAGFPCQPFSQA 82 F + + DIA K + IP+ D+L+ GFPCQ +S A Sbjct: 63 KRFGEGSCVNEDIAVVLQEVKDGKRSIPEFDMLVGGFPCQDYSVA 107 >gi|46019826|emb|CAE52348.1| putative cytosine-specific methyltransferase [Streptococcus thermophilus] Length = 365 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 17/91 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-----IFGDIAK 58 + DLF G GG L Q F + + ++KTY+ N +++ +F + + Sbjct: 6 VVDLFSGAGG----LSQGFKQAGFNILMGVDFDDPALKTYKHNLKDSVALKADLFDEESA 61 Query: 59 IKTQDIPDH------DVLLAGFPCQPFSQAG 83 IK DI ++ DV++AG PCQ FS G Sbjct: 62 IK--DIENNLNGNKIDVIIAGPPCQGFSLTG 90 >gi|121698875|ref|XP_001267835.1| C-5 cytosine-specific DNA methylase, putative [Aspergillus clavatus NRRL 1] gi|119395977|gb|EAW06409.1| C-5 cytosine-specific DNA methylase, putative [Aspergillus clavatus NRRL 1] Length = 2150 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 14/78 (17%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT----------QD 63 +R + F+ R++ FS+EI P+ + NF +F D+A++K + Sbjct: 136 LRKHFRKNFDFRHL---FSAEIVPFKQAYIERNFHPRFLFRDVAQLKDRVAQTAYGSLEK 192 Query: 64 IPDH-DVLLAGFPCQPFS 80 IP + D+L+AGF C FS Sbjct: 193 IPKNADLLIAGFSCVDFS 210 >gi|322377723|ref|ZP_08052213.1| modification methylase HgiDII [Streptococcus sp. M334] gi|321281488|gb|EFX58498.1| modification methylase HgiDII [Streptococcus sp. M334] Length = 351 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 11/86 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLFCG+GG+ ++Q + +I+ S Y+ N I DI I+ Sbjct: 3 INAVDLFCGVGGLTYGIQQA----GINVVAGYDIDEKSKFAYEYNNDAKFILKDINGIED 58 Query: 62 QDI-------PDHDVLLAGFPCQPFS 80 +I D VL+ PCQPFS Sbjct: 59 DEILGLYPSDTDIKVLIGCAPCQPFS 84 >gi|226330016|ref|ZP_03805534.1| hypothetical protein PROPEN_03929 [Proteus penneri ATCC 35198] gi|225200811|gb|EEG83165.1| hypothetical protein PROPEN_03929 [Proteus penneri ATCC 35198] Length = 325 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Query: 33 SEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83 +EI+ ++ T + N P +I GD+A I + DVL GFPCQ FS AG Sbjct: 3 NEIDKHACNTLRLNRPKWNVIEGDVAGIDFSEYKGKVDVLAGGFPCQAFSYAG 55 >gi|169794286|ref|YP_001712079.1| putative cytosine-specific methyltransferase [Acinetobacter baumannii AYE] gi|213159140|ref|YP_002321138.1| DNA cytosine methyltransferase [Acinetobacter baumannii AB0057] gi|215481844|ref|YP_002324026.1| Modification methylase HgiDII(Cytosine-specificmethyltransferase HgiDII) [Acinetobacter baumannii AB307-0294] gi|332850048|ref|ZP_08432435.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii 6013150] gi|332871527|ref|ZP_08440021.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii 6013113] gi|169147213|emb|CAM85072.1| putative cytosine-specific methyltransferase [Acinetobacter baumannii AYE] gi|213058300|gb|ACJ43202.1| DNA cytosine methyltransferase [Acinetobacter baumannii AB0057] gi|213986404|gb|ACJ56703.1| Modification methylase HgiDII(Cytosine-specificmethyltransferase HgiDII) [Acinetobacter baumannii AB307-0294] gi|332730897|gb|EGJ62203.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii 6013150] gi|332731381|gb|EGJ62673.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii 6013113] Length = 355 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 15/90 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 +K+ D F G GG L Q ++ + + + +TYQANFP L + DI ++ Sbjct: 1 MKVIDFFSGCGGASEGLRQA----GLDITIGLDFDIKAAETYQANFPEALFYNVDIRELD 56 Query: 61 TQDIP----------DHDVLLAGFPCQPFS 80 +++ + + +A PCQPFS Sbjct: 57 EKELAKAFKEKNREKEPLLFVACAPCQPFS 86 >gi|42779446|ref|NP_976693.1| DNA-cytosine methyltransferase family protein [Bacillus cereus ATCC 10987] gi|42735362|gb|AAS39301.1| DNA-cytosine methyltransferase family protein [Bacillus cereus ATCC 10987] Length = 350 Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%) Query: 1 MLKITDLFCGIGGIRLD-LEQTFNHRNVECF--FSSEINPYSVKTYQANF----PNTLIF 53 + ++ +LFCG GGI + + N ++++ + + +TY+ N PNT+ Sbjct: 2 IFRLGELFCGPGGIAWGAMNASIEDPNFAIVHQWANDYDADTCETYRLNICPDTPNTVYH 61 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI K + D L GFPC +S G Sbjct: 62 ADIRKFDMSKLAPIDALAFGFPCNDYSVVG 91 >gi|270012712|gb|EFA09160.1| DNA methyltransferase 2 [Tribolium castaneum] Length = 329 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++I +L+ GIGG+ L+ + ++ + +INP + Y+ NFP+ L+ ++ + Sbjct: 1 MEILELYSGIGGMHWALKVSGVEGTIKA--AVDINPTANSVYKHNFPHINLLNRNVQSLT 58 Query: 61 TQDIPDHDV--LLAGFPCQPFSQAG 83 Q I V +L PCQPF++ G Sbjct: 59 PQFINKLGVNTILMSPPCQPFTRNG 83 >gi|124486003|ref|YP_001030619.1| hypothetical protein Mlab_1183 [Methanocorpusculum labreanum Z] gi|124363544|gb|ABN07352.1| DNA-cytosine methyltransferase [Methanocorpusculum labreanum Z] Length = 352 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 14/86 (16%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI- 64 D FCG GGI L ++ +I+P +TY+ N N + DI I +I Sbjct: 13 DFFCGGGGITKGLSDA----GIKVLGGIDISPDLKRTYEENNHNKFVNFDIRTISGSNIY 68 Query: 65 --------PDHDVLLAG-FPCQPFSQ 81 + ++LLAG PCQPFS+ Sbjct: 69 KEFPEIEGDEDNLLLAGCAPCQPFSK 94 >gi|1709163|sp|P50188|MTN1_NOCAE RecName: Full=Modification methylase NaeI; Short=M.NaeI; AltName: Full=Cytosine-specific methyltransferase NaeI gi|775103|gb|AAC43325.1| NaeI modification methyltransferase [Lechevalieria aerocolonigenes] Length = 413 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKI 59 L++ ++ G GG L LE+ F+HR + E++ + T + N + +I GD+A Sbjct: 4 LEVVEICAGAGGQALGLEKAGFSHR-----LAVELDVNAAATLRKNLKSDVVITGDVADP 58 Query: 60 KTQDIPDH---DVLLAGFPCQPFSQAG 83 + +H +L G PC PFS AG Sbjct: 59 SVLNPMEHLGVSLLAGGVPCPPFSIAG 85 >gi|328958689|ref|YP_004376075.1| DNA-methyltransferase [Carnobacterium sp. 17-4] gi|328675013|gb|AEB31059.1| DNA-methyltransferase [Carnobacterium sp. 17-4] Length = 431 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-----SVKTYQANFPNTL-IFGD 55 I +LF G+GG R+ E + N + ++++ P + + Y ++P ++ I + Sbjct: 5 FNILELFAGVGGFRVGFENS-NESMFKTKWANQWEPAKKSQDAFEVYDYHYPESMNINEN 63 Query: 56 IAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 I +I + D D+++ GFPCQ +S A Sbjct: 64 IEEISDEAFQSMDADIIVGGFPCQDYSVA 92 >gi|313886494|ref|ZP_07820210.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas asaccharolytica PR426713P-I] gi|312924040|gb|EFR34833.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas asaccharolytica PR426713P-I] Length = 351 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 10/83 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLFCGIGG+ L + ++ +++ Y+ N I+ DI + ++ Sbjct: 5 VVDLFCGIGGLSYGLREA----GLQILAGYDLDQTCAFAYERNNNAQFIYKDIRMVSGKE 60 Query: 64 IP------DHDVLLAGFPCQPFS 80 + D VL PCQPFS Sbjct: 61 VSTLLAETDVKVLAGCAPCQPFS 83 >gi|306821027|ref|ZP_07454646.1| possible DNA (cytosine-5-)-methyltransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550968|gb|EFM38940.1| possible DNA (cytosine-5-)-methyltransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 317 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + + +LF GIG +R L Q H+ V+ EI+ VK+Y A + DI K Sbjct: 9 VNVLELFGGIGALRKALIRQKIPHKVVDYV---EIDKNCVKSYNALYNADFTPKDIVKYH 65 Query: 61 TQDIPDH--DVLLAGFPCQPFSQAG 83 P+ D+L+ G PCQ FS+ G Sbjct: 66 A---PNERVDLLMHGSPCQDFSRIG 87 >gi|317010333|gb|ADU84080.1| cytosine specific DNA methyltransferase [Helicobacter pylori SouthAfrica7] Length = 361 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDI--AKI 59 KI DLFCG GG LE+ + + + ++ T++ N N + I GDI A I Sbjct: 4 KILDLFCGAGGFSAGLERL---KEFSALIGLDCDKQALNTFENNHKNAVGICGDITQAGI 60 Query: 60 KTQDIP-----DHDVLLAGFPCQPFSQAG 83 K + I + ++++ G PCQ FS G Sbjct: 61 KEKVIELAKKLEINMIIGGPPCQGFSNKG 89 >gi|304390603|ref|ZP_07372556.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326359|gb|EFL93604.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 309 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 L+ DLF G GG+ L E + + E +++ Y+ANF + + D++ + Sbjct: 7 LRCVDLFSGCGGMSLGFEMA----GFDVVAAYENWAPALRVYRANFDHPAVEQDLSNVAE 62 Query: 61 -----TQDIPDHDVLLAGFPCQPFSQAG 83 TQ P D+++ G PCQ FS AG Sbjct: 63 SVESITQFEP--DLVIGGPPCQDFSTAG 88 >gi|254475144|ref|ZP_05088530.1| DNA-cytosine methyltransferase [Ruegeria sp. R11] gi|214029387|gb|EEB70222.1| DNA-cytosine methyltransferase [Ruegeria sp. R11] Length = 324 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 13/89 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK 58 ML +L G GG L LE+ F H + EI+ + T + N P ++ D+ K Sbjct: 1 MLTSVELCAGAGGQALGLEKAGFEHTAL-----VEIDKHCCATLRHNRPKWNVLEEDVRK 55 Query: 59 IKTQDIPDH----DVLLAGFPCQPFSQAG 83 K D+ D D+L G PC PFS AG Sbjct: 56 FK--DVADSYHGIDLLAGGLPCPPFSVAG 82 >gi|327535475|gb|AEA94309.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis OG1RF] Length = 363 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 10/92 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANF----PNTLIFG 54 K+ +LFCG GGI L + + ++ ++++ + + +TY N P T+I Sbjct: 3 FKLGELFCGPGGIALGAMTSQSDDGIYKIDHAWANDFDKDTCQTYINNICPEKPETVICE 62 Query: 55 DIAKI---KTQDIPDHDVLLAGFPCQPFSQAG 83 DI K+ K + I D D L GFPC FS G Sbjct: 63 DIRKLDFRKLKRISDIDGLAFGFPCNDFSIVG 94 >gi|325971313|ref|YP_004247504.1| DNA-cytosine methyltransferase [Spirochaeta sp. Buddy] gi|324026551|gb|ADY13310.1| DNA-cytosine methyltransferase [Spirochaeta sp. Buddy] Length = 516 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 12/87 (13%) Query: 3 KITDLFCGIGGIRLDLEQTF-NHRNVECFFSSEINPYSVKTYQANFPNT------LIFGD 55 ++ DLF G GG L Q F N N + E N Y+ +T + N T L + D Sbjct: 4 RVLDLFAGAGG----LSQGFKNAGNFSIAVAIENNKYAQETCRENHKETTMLSDVLDYSD 59 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 + KT+ + DV++ G PCQ FS A Sbjct: 60 FSDFKTK-YGEFDVVIGGPPCQGFSNA 85 >gi|319645695|ref|ZP_07999926.1| DNA-cytosine methyltransferase [Bacillus sp. BT1B_CT2] gi|317392242|gb|EFV73038.1| DNA-cytosine methyltransferase [Bacillus sp. BT1B_CT2] Length = 327 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 18/89 (20%) Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFG 54 M+KI +LF GIG R L +H+ ++ EI+ +V+ Y A + P +++ Sbjct: 1 MIKILELFGGIGAPRKALVNLGVDHKAIDYV---EIDEKAVRAYNALYDHRYKPQSVVGY 57 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D+ DVL+ G PCQ FS+AG Sbjct: 58 DLRP---------DVLVHGSPCQDFSRAG 77 >gi|220926789|ref|YP_002502091.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060] gi|219951396|gb|ACL61788.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060] Length = 358 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 10/86 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + DLFCG GG+ L ++ S + +P +Y N P + LI D+A + + Sbjct: 2 LIDLFCGCGGLSLGARSA----GLKVTLSVDNDPILTSSYTFNHPQSRLILADVADLSGR 57 Query: 63 DIPDH-----DVLLAGFPCQPFSQAG 83 + D ++ G PCQ FS+ G Sbjct: 58 YLRRAAGGYIDGIVGGPPCQGFSEIG 83 >gi|86134515|ref|ZP_01053097.1| DNA (cytosine-5-)-methyltransferase [Polaribacter sp. MED152] gi|85821378|gb|EAQ42525.1| DNA (cytosine-5-)-methyltransferase [Polaribacter sp. MED152] Length = 583 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 9/86 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 L + D FCG GG Q + +E F P ++ TY NF DI K K Sbjct: 4 LTVIDFFCGAGGFSEGFRQV-GFKILEGF--DNWQP-AINTYNYNFDTESKLTDILKFKD 59 Query: 61 ----TQDIPDHDVLLAGFPCQPFSQA 82 ++PD D+++ PC FS + Sbjct: 60 SLEEIDNLPDSDIIIGSPPCVSFSSS 85 >gi|145218883|ref|YP_001129592.1| DNA-cytosine methyltransferase [Prosthecochloris vibrioformis DSM 265] gi|145205047|gb|ABP36090.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265] Length = 377 Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 13/90 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55 L +LFCG GG+ + L + H ++EI P T+ N P T + D Sbjct: 5 LNAVELFCGAGGLSIGLSRAGFH----IALANEIEPDFAATFSLNHPETKMLNEDIHDID 60 Query: 56 IAK--IKTQDIPDHDVLLAGFPCQPFSQAG 83 A+ +KT I D ++ G PCQ FS G Sbjct: 61 FARESLKT-GITDVTLVSGGPPCQGFSTVG 89 >gi|194098027|ref|YP_002001075.1| methylase [Neisseria gonorrhoeae NCCP11945] gi|239998490|ref|ZP_04718414.1| methylase [Neisseria gonorrhoeae 35/02] gi|240013615|ref|ZP_04720528.1| methylase [Neisseria gonorrhoeae DGI18] gi|240016054|ref|ZP_04722594.1| methylase [Neisseria gonorrhoeae FA6140] gi|240080196|ref|ZP_04724739.1| methylase [Neisseria gonorrhoeae FA19] gi|240112409|ref|ZP_04726899.1| methylase [Neisseria gonorrhoeae MS11] gi|240115149|ref|ZP_04729211.1| methylase [Neisseria gonorrhoeae PID18] gi|240117433|ref|ZP_04731495.1| methylase [Neisseria gonorrhoeae PID1] gi|240120685|ref|ZP_04733647.1| methylase [Neisseria gonorrhoeae PID24-1] gi|240122989|ref|ZP_04735945.1| methylase [Neisseria gonorrhoeae PID332] gi|240125241|ref|ZP_04738127.1| methylase [Neisseria gonorrhoeae SK-92-679] gi|240127695|ref|ZP_04740356.1| methylase [Neisseria gonorrhoeae SK-93-1035] gi|254493209|ref|ZP_05106380.1| methylase [Neisseria gonorrhoeae 1291] gi|260441033|ref|ZP_05794849.1| methylase [Neisseria gonorrhoeae DGI2] gi|268594349|ref|ZP_06128516.1| methylase [Neisseria gonorrhoeae 35/02] gi|268596345|ref|ZP_06130512.1| methylase [Neisseria gonorrhoeae FA19] gi|268598472|ref|ZP_06132639.1| methylase [Neisseria gonorrhoeae MS11] gi|268600825|ref|ZP_06134992.1| methylase [Neisseria gonorrhoeae PID18] gi|268603130|ref|ZP_06137297.1| methylase [Neisseria gonorrhoeae PID1] gi|268681611|ref|ZP_06148473.1| methylase [Neisseria gonorrhoeae PID332] gi|268683839|ref|ZP_06150701.1| methylase [Neisseria gonorrhoeae SK-92-679] gi|268686080|ref|ZP_06152942.1| methylase [Neisseria gonorrhoeae SK-93-1035] gi|291044365|ref|ZP_06570074.1| methylase [Neisseria gonorrhoeae DGI2] gi|293399551|ref|ZP_06643704.1| methylase [Neisseria gonorrhoeae F62] gi|193933317|gb|ACF29141.1| methylase [Neisseria gonorrhoeae NCCP11945] gi|226512249|gb|EEH61594.1| methylase [Neisseria gonorrhoeae 1291] gi|268547738|gb|EEZ43156.1| methylase [Neisseria gonorrhoeae 35/02] gi|268550133|gb|EEZ45152.1| methylase [Neisseria gonorrhoeae FA19] gi|268582603|gb|EEZ47279.1| methylase [Neisseria gonorrhoeae MS11] gi|268584956|gb|EEZ49632.1| methylase [Neisseria gonorrhoeae PID18] gi|268587261|gb|EEZ51937.1| methylase [Neisseria gonorrhoeae PID1] gi|268621895|gb|EEZ54295.1| methylase [Neisseria gonorrhoeae PID332] gi|268624123|gb|EEZ56523.1| methylase [Neisseria gonorrhoeae SK-92-679] gi|268626364|gb|EEZ58764.1| methylase [Neisseria gonorrhoeae SK-93-1035] gi|291011259|gb|EFE03255.1| methylase [Neisseria gonorrhoeae DGI2] gi|291610120|gb|EFF39242.1| methylase [Neisseria gonorrhoeae F62] gi|317163768|gb|ADV07309.1| methylase [Neisseria gonorrhoeae TCDC-NG08107] Length = 112 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 8/71 (11%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--KIKTQD 63 DLF GIGG R+ ++ + E FSSE + + TY+ANF + FGDI +IK Q Sbjct: 44 DLFAGIGGFRIAMQ----NLGGEYVFSSEWDEKAKLTYEANF-GEVPFGDITLEEIK-QY 97 Query: 64 IPDHDVLLAGF 74 IP +L GF Sbjct: 98 IPKQFDVLCGF 108 >gi|171779450|ref|ZP_02920414.1| hypothetical protein STRINF_01295 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282067|gb|EDT47498.1| hypothetical protein STRINF_01295 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 133 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 +K DLF GIGG RL L + EC EI+ ++ K+Y+A + + F DI ++ Sbjct: 4 MKFLDLFAGIGGFRLGL----TRQGHECIGFCEIDKFARKSYKAIYETEGEIEFHDIRQV 59 Query: 60 KTQD 63 QD Sbjct: 60 TDQD 63 >gi|169825537|ref|YP_001695712.1| modification methylase [Lysinibacillus sphaericus C3-41] gi|168994814|gb|ACA42353.1| Modification methylase [Lysinibacillus sphaericus C3-41] Length = 296 Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDH 67 F G GG+ L + + ++ S EI+ + T + NF + + DI KI D D Sbjct: 19 FSGAGGLDLGIIEA----GIDVIESFEIDKKACNTLRNNFKHIINETDITKITVLDQQDA 74 Query: 68 DVLLAGFPCQPFS 80 DV + FPC +S Sbjct: 75 DVYIGTFPCTKYS 87 >gi|251788110|ref|YP_003002831.1| DNA-cytosine methyltransferase [Dickeya zeae Ech1591] gi|247536731|gb|ACT05352.1| DNA-cytosine methyltransferase [Dickeya zeae Ech1591] Length = 490 Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 8/87 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI- 59 ML+ + GI + L E ++ + SE++P+ +P+ GDI +I Sbjct: 9 MLQYGSVCSGIEAVSLAWEPL----GLQAAWFSEVDPFPNAVLAHRYPHIPNLGDITRIA 64 Query: 60 ---KTQDIPDHDVLLAGFPCQPFSQAG 83 + ++ D+L+ G PCQ FS AG Sbjct: 65 DRVQNGEVTAPDILVGGTPCQAFSIAG 91 >gi|225862883|ref|YP_002748261.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102] gi|225787129|gb|ACO27346.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102] Length = 367 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 11/88 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61 KI DLF G+GG L E E F+ + ++ TY N + + DIA + Sbjct: 5 KIMDLFSGVGGFSLGFEMA----GYETIFAIDFWKDAIATYNLNRKKDIAVHMDIANLTN 60 Query: 62 QDI----PDHDV--LLAGFPCQPFSQAG 83 + + +HD+ ++ G PCQ FS G Sbjct: 61 EHLRKLKEEHDIEGIIGGPPCQGFSTVG 88 >gi|251789087|ref|YP_003003808.1| DNA-cytosine methyltransferase [Dickeya zeae Ech1591] gi|247537708|gb|ACT06329.1| DNA-cytosine methyltransferase [Dickeya zeae Ech1591] Length = 411 Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDI 64 + F G G R L + + +C F+++++P TY N+ + D+ ++ ++ Sbjct: 24 EFFAGGGMARAGLGKQW-----QCLFANDMDPIKASTYIDNWGDEHFDIRDVREVAPDEL 78 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P H D+ A FPCQ S AG Sbjct: 79 PLHADLSWASFPCQDLSLAG 98 >gi|304407248|ref|ZP_07388901.1| DNA-cytosine methyltransferase [Paenibacillus curdlanolyticus YK9] gi|304343689|gb|EFM09530.1| DNA-cytosine methyltransferase [Paenibacillus curdlanolyticus YK9] Length = 401 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 11/90 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 M K+ DLF G GG L + F + S EI+ + T + N P T + D+ ++ Sbjct: 1 MYKVLDLFSGCGG----LGEGFLQAGFDIAASVEIDEKACATQKFNHPETQVLQADLTQL 56 Query: 60 KTQD------IPDHDVLLAGFPCQPFSQAG 83 +D I + D+++ G PCQ FS G Sbjct: 57 APRDLSLATGITNFDLIIGGPPCQGFSLIG 86 >gi|228917967|ref|NP_142059.2| modification methylase [Pyrococcus horikoshii OT3] Length = 312 Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + DLF G GG L + + R V S P +TY NFP ++ DI + + Sbjct: 12 VIDLFAGAGGFSLGFKLS-GFRIVSAIES--FRP-KAETYSINFPEAKVVVRDIKAVNPR 67 Query: 63 DIPDH-DVLLAGFPCQPFS 80 +I + DV++ G PC+PF+ Sbjct: 68 EIAEKVDVIIGGPPCEPFT 86 >gi|315917403|ref|ZP_07913643.1| type II restriction-modification system methylation subunit [Fusobacterium gonidiaformans ATCC 25563] gi|313691278|gb|EFS28113.1| type II restriction-modification system methylation subunit [Fusobacterium gonidiaformans ATCC 25563] Length = 320 Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 13/87 (14%) Query: 2 LKITDLFCGIGGIRLD-LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +KI +LF GIG IR + Q H+ ++ EI+ VK+Y A + NT D Sbjct: 7 IKIIELFGGIGAIRKAFIRQKIPHQVIDYV---EIDKNCVKSYNALY-NT----DFKPKS 58 Query: 61 TQDI--PDH--DVLLAGFPCQPFSQAG 83 D PD D+L+ G PCQ FS++G Sbjct: 59 ILDFHPPDERIDLLMHGSPCQDFSRSG 85 >gi|289423000|ref|ZP_06424820.1| modification methylase ScrFIB [Peptostreptococcus anaerobius 653-L] gi|289156574|gb|EFD05219.1| modification methylase ScrFIB [Peptostreptococcus anaerobius 653-L] Length = 329 Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 19/90 (21%) Query: 2 LKITDLFCGIGGIRLD-LEQTFNHRNVECFFSSEINPYSVKTYQA----NF-PNTLIFGD 55 +KI +LF GIG IR + Q H+ ++ EI+ VK+Y A NF P ++++ Sbjct: 18 IKIIELFGGIGAIRKAFIRQKIPHQVIDYV---EIDKNCVKSYNALYNTNFKPKSILYFH 74 Query: 56 IAKIKTQDIPDH--DVLLAGFPCQPFSQAG 83 PD D+L+ G PCQ FS++G Sbjct: 75 P--------PDEKIDLLMHGSPCQDFSRSG 96 >gi|229824476|ref|ZP_04450545.1| hypothetical protein GCWU000282_01799 [Catonella morbi ATCC 51271] gi|229786077|gb|EEP22191.1| hypothetical protein GCWU000282_01799 [Catonella morbi ATCC 51271] Length = 414 Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%) Query: 49 NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 N L+ DI KI QD+P+ D+L FPCQ S +G Sbjct: 103 NNLV--DITKIHAQDLPEADILTYSFPCQDLSISG 135 >gi|323456007|gb|EGB11874.1| hypothetical protein AURANDRAFT_70672 [Aureococcus anophagefferens] Length = 3210 Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 14/68 (20%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT----------QDIP---DH-DVLLA 72 VE FSSE+ P+ Q NF L+F D+ ++ +D+P DH DVL+A Sbjct: 333 VEHIFSSEVEPFKQAYIQRNFAPPLLFRDVRELGNKRAHTAFGALEDVPQDRDHFDVLIA 392 Query: 73 GFPCQPFS 80 G C +S Sbjct: 393 GTSCVDYS 400 >gi|209875617|ref|XP_002139251.1| DNA (cytosine-5)-methyltransferase domain-containing protein [Cryptosporidium muris RN66] gi|209554857|gb|EEA04902.1| DNA (cytosine-5)-methyltransferase domain-containing protein [Cryptosporidium muris RN66] Length = 422 Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 10/91 (10%) Query: 1 MLKITDLFCGIGGIRLDL----EQTFNHR---NVECFFSSEINPYSVKTYQANFPNTLI- 52 ML +T L GIGG+ L L E+ H +++ + E+N Y+ +F +T + Sbjct: 1 MLNLTSLD-GIGGLHLSLKYAIEKLVEHGQAIDIKVIKAFELNENCNNIYKRHFKDTQVC 59 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I + DIP ++ L G PCQPF++ G Sbjct: 60 TKSIESLNIDDIPKANIWLLG-PCQPFTRGG 89 >gi|302504717|ref|XP_003014317.1| C-5 cytosine methyltransferase DmtA [Arthroderma benhamiae CBS 112371] gi|291177885|gb|EFE33677.1| C-5 cytosine methyltransferase DmtA [Arthroderma benhamiae CBS 112371] Length = 644 Score = 38.1 bits (87), Expect = 0.35, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 9/81 (11%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDI 64 D FCG GG+ +Q ++ ++ + + ++ +Y+ANFP+ L ++A+ T + Sbjct: 281 DGFCGAGGVSRGAQQA----GLKLSWAFDKSESAINSYRANFPSCLAEHSEVAQFLTS-L 335 Query: 65 PDH---DVLLAGFPCQPFSQA 82 P DV+ PCQPFS A Sbjct: 336 PRELLVDVMHVSPPCQPFSPA 356 >gi|283457186|ref|YP_003361755.1| site-specific DNA methylase [Rothia mucilaginosa DY-18] gi|283133170|dbj|BAI63935.1| site-specific DNA methylase [Rothia mucilaginosa DY-18] Length = 439 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--------CFFSSEINP-------YSVKTYQ-- 44 +++ +LF G+GG RL E +N + ++++ P ++ + YQ Sbjct: 12 IRVIELFAGVGGFRLGFE-GYNANGMTLPSAGPFTTVWANQWEPPGTVGRQFAARCYQER 70 Query: 45 ----ANFPNTLIFG--DIAKIKTQDIPDHDVLLAGFPCQPFS 80 AN N I D + +IPD D+L GFPCQ +S Sbjct: 71 FGEEANLENRDIHAVLDDVEAGLYEIPDADLLCGGFPCQDYS 112 >gi|296112182|ref|YP_003622593.1| putative C-5 cytosine-specific DNA methylase [Thiomonas sp. 3As] gi|294341994|emb|CAZ90422.1| putative C-5 cytosine-specific DNA methylase [Thiomonas sp. 3As] Length = 304 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 +K DLF G GG Q VE +++ P +V + AN P + D+ + Sbjct: 1 MKAIDLFSGAGGFTEGARQA----GVEVCWAANHWPAAVACHSANHPEAVHACQDLEQAD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 + +P HDVL+A CQ S A Sbjct: 57 WRAVPAHDVLMASPACQGHSPA 78 >gi|302654293|ref|XP_003018954.1| C-5 cytosine methyltransferase DmtA [Trichophyton verrucosum HKI 0517] gi|291182644|gb|EFE38309.1| C-5 cytosine methyltransferase DmtA [Trichophyton verrucosum HKI 0517] Length = 582 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 9/81 (11%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDI 64 D FCG GG+ +Q ++ ++ + + ++ +Y+ANFP+ L ++A+ T + Sbjct: 280 DGFCGAGGVSRGAQQA----GLKLSWAFDKSESAINSYRANFPSCLAEHSEVAQFLTS-L 334 Query: 65 PDH---DVLLAGFPCQPFSQA 82 P DV+ PCQPFS A Sbjct: 335 PRELLVDVMHVSPPCQPFSPA 355 >gi|170077471|ref|YP_001734109.1| site-specific DNA-methyltransferase [Synechococcus sp. PCC 7002] gi|169885140|gb|ACA98853.1| site-specific DNA-methyltransferase [Synechococcus sp. PCC 7002] Length = 413 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 16/90 (17%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDI 64 DLF G GG+ L LE + + EI+P ++ NFP + F DI ++ ++ Sbjct: 9 DLFAGCGGMSLGLEAA----GFDVVAAVEIDPVHALVHEVNFPYGVTFCRDIRHLQWPEM 64 Query: 65 -----------PDHDVLLAGFPCQPFSQAG 83 D D+L G PCQ FS G Sbjct: 65 RQAIERRGYSTADIDLLTGGPPCQGFSVMG 94 >gi|323454936|gb|EGB10805.1| hypothetical protein AURANDRAFT_62303 [Aureococcus anophagefferens] Length = 1635 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 4/73 (5%) Query: 15 RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP----DHDVL 70 R L + F R EI+ +++ +A P+ L GD A+++ +++P + ++ Sbjct: 836 RGQLSKAFALRGARIVAVGEIDETALEMLRAEHPDALAMGDTARLEYRNVPWSRHAYRIV 895 Query: 71 LAGFPCQPFSQAG 83 GFPCQ + G Sbjct: 896 CGGFPCQMVAPQG 908 >gi|323447623|gb|EGB03537.1| hypothetical protein AURANDRAFT_67921 [Aureococcus anophagefferens] Length = 675 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 4/73 (5%) Query: 15 RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP----DHDVL 70 R L + F R EI+ +++ +A P+ L GD A+++ +++P + ++ Sbjct: 217 RGQLSKAFALRGARIVAVGEIDETALEMLRAEHPDALAMGDTARLEYRNVPWSRHAYRIV 276 Query: 71 LAGFPCQPFSQAG 83 GFPCQ + G Sbjct: 277 CGGFPCQMVAPQG 289 >gi|127440|sp|P24600|MTD1_HERAU RecName: Full=Modification methylase HgiDI; Short=M.HgiDI; AltName: Full=Cytosine-specific methyltransferase HgiDI gi|43482|emb|CAA38938.1| methyltransferase [Herpetosiphon aurantiacus] Length = 309 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 +K DLF G GG+ L Q E + + ++ TYQ NF + + D+A+I Sbjct: 1 MKTIDLFAGCGGMSLGFMQA----GFEIVAAVDNWRPAINTYQQNFTHPIHELDLAQIDA 56 Query: 61 -TQDIPDH--DVLLAGFPCQPFSQAG 83 I H ++++ G PCQ FS AG Sbjct: 57 AVSLIKTHSPELIIGGPPCQDFSSAG 82 >gi|309379397|emb|CBX21964.1| putative DNA cytosine methyltransferase [Neisseria lactamica Y92-1009] Length = 195 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFP--NTLIFGDIA 57 +++ +F GIG + EQ F N+ F+ +I+ + K+Y N+ DI Sbjct: 38 IRLATVFSGIGAV----EQAFYRLNLNHTIVFAGDIDSHVKKSYLGNYKLNEDFWHNDIT 93 Query: 58 KIKTQDIPDH-DVLLAGFPCQPFSQAG 83 + + + D+L+ G PCQ FS G Sbjct: 94 QFDARKFRNQVDILVGGSPCQAFSMVG 120 >gi|308803765|ref|XP_003079195.1| possible site-specific DNA-methyltransferase (ISS) [Ostreococcus tauri] gi|116057650|emb|CAL53853.1| possible site-specific DNA-methyltransferase (ISS) [Ostreococcus tauri] Length = 840 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80 +E +P+ + A FP + D+A++ + D D +LAGFPC S Sbjct: 42 AEKDPHCKQVLAARFPGVALLNDVAEVLPSMLTDIDCILAGFPCNDCS 89 >gi|170719133|ref|YP_001784281.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] gi|168827262|gb|ACA32633.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] Length = 408 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANF--PNTLIFGDIA 57 +++ F GIG I EQ F + F+ +I+P+ K+Y AN+ DI Sbjct: 34 IRLATTFSGIGAI----EQAFKRLELNHCIVFAGDIDPHVKKSYLANYDLSEEHWHSDIT 89 Query: 58 KIKTQDIPDH-DVLLAGFPCQPFSQAG 83 D D+L+ G PCQ FS G Sbjct: 90 TFDAIPYRDQVDILVGGSPCQAFSMVG 116 >gi|257466246|ref|ZP_05630557.1| Type II restriction-modification system methylation subunit [Fusobacterium gonidiaformans ATCC 25563] Length = 327 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 13/87 (14%) Query: 2 LKITDLFCGIGGIRLD-LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +KI +LF GIG IR + Q H+ ++ EI+ VK+Y A + NT D Sbjct: 14 IKIIELFGGIGAIRKAFIRQKIPHQVIDYV---EIDKNCVKSYNALY-NT----DFKPKS 65 Query: 61 TQDI--PDH--DVLLAGFPCQPFSQAG 83 D PD D+L+ G PCQ FS++G Sbjct: 66 ILDFHPPDERIDLLMHGSPCQDFSRSG 92 >gi|167630968|ref|YP_001681467.1| DNA-cytosine methyltransferase [Heliobacterium modesticaldum Ice1] gi|167593708|gb|ABZ85456.1| DNA-cytosine methyltransferase [Heliobacterium modesticaldum Ice1] Length = 667 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L N + ++SEI P+ ++ P +GDI+ I Sbjct: 5 LTLGSLFDGSGG--FPLGAVLN--GITPVWASEIEPFPIRVTTRRLPQMKHYGDISCING 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +I D++ G PC S AG Sbjct: 61 TEIEPVDIISFGSPCTDMSVAG 82 >gi|254825117|ref|ZP_05230118.1| DNA-cytosine methyltransferase [Listeria monocytogenes FSL J1-194] gi|293594360|gb|EFG02121.1| DNA-cytosine methyltransferase [Listeria monocytogenes FSL J1-194] Length = 326 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 16/87 (18%) Query: 2 LKITDLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 LKI +LF GIG R L H++++ EI+ +V+ Y A + T I+ Sbjct: 4 LKILELFGGIGAPRKALINLGIEHKSIDYV---EIDEKAVRAYNALYDKT--------IQ 52 Query: 61 TQDIPDH----DVLLAGFPCQPFSQAG 83 Q + + D+L+ G PCQ FS+AG Sbjct: 53 PQSVVGYNLRPDLLIHGSPCQDFSRAG 79 >gi|26990617|ref|NP_746042.1| DNA-cytosine methyltransferase [Pseudomonas putida KT2440] gi|24985601|gb|AAN69506.1|AE016584_14 DNA-cytosine methyltransferase [Pseudomonas putida KT2440] Length = 553 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIK----TQDIPDHDVLLAGFPCQPFSQAG 83 +EI P+ ++P T GD+ ++ + IP +VL+ G PCQ FS AG Sbjct: 30 AEIEPFPCAVLAHHYPATPNHGDMTRLAAMVLSGKIPAPEVLVGGTPCQAFSVAG 84 >gi|458402|gb|AAA50432.1| M-XorII [Xanthomonas oryzae] Length = 424 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 19/90 (21%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------------F 53 DLF G GG+ L EQ + + +I+P ++ NFP Sbjct: 8 DLFAGAGGLSLGFEQA----GFDLVAAVDIDPIHCAAHKFNFPKCATVCKSVVDVTRSEL 63 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 IA I +DI D+++ G PCQ FS G Sbjct: 64 RRIAGIGKRDI---DIVIGGAPCQGFSLIG 90 >gi|42783651|ref|NP_980898.1| DNA-cytosine methyltransferase family protein [Bacillus cereus ATCC 10987] gi|42739580|gb|AAS43506.1| DNA-cytosine methyltransferase family protein [Bacillus cereus ATCC 10987] Length = 362 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 15/87 (17%) Query: 7 LFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 F G GG+ + + + F+ R S E+ P +T + N PN ++ GDI + + Sbjct: 6 FFAGAGGLDMGIHKAGFDVR-----VSVELEPVYCETLRTNHPNWNVVEGDIMTYTPEQV 60 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS AG Sbjct: 61 LEQADLQEGEVDLMIGGSPCQSFSTAG 87 >gi|258574543|ref|XP_002541453.1| predicted protein [Uncinocarpus reesii 1704] gi|237901719|gb|EEP76120.1| predicted protein [Uncinocarpus reesii 1704] Length = 726 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 11/63 (17%) Query: 30 FFSSEINPYSVKTYQANFPNTLIFGDIAKI----------KTQDIPDH-DVLLAGFPCQP 78 FS+EI P+ Q NF ++F D++++ + +P + D+L+AGF C Sbjct: 176 LFSAEIEPFKQSYIQRNFSPDILFRDVSELVNNEATTAFGSVRTVPTNPDLLVAGFSCVD 235 Query: 79 FSQ 81 FSQ Sbjct: 236 FSQ 238 >gi|190571759|ref|YP_001966438.1| M2.LlaJI [Lactococcus lactis] gi|46487640|gb|AAS99178.1| M2.LlaJI [Lactococcus lactis] Length = 379 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L+ LF +G L++ V+ ++EI+ + YQ +PNT +I GDI + Sbjct: 4 LRGLSLFANVGIAEAFLDEI----GVDIKIANEIDKERARFYQDVYPNTNMICGDITEDT 59 Query: 61 TQDI-------PDHDVLLAGFPCQPFSQAG 83 T+D+ D D ++A PCQ S+AG Sbjct: 60 TRDLIVDLAIKEDVDFVIATPPCQGMSEAG 89 >gi|228471277|ref|ZP_04056083.1| modification methylase HgiDII [Porphyromonas uenonis 60-3] gi|228306919|gb|EEK16017.1| modification methylase HgiDII [Porphyromonas uenonis 60-3] Length = 351 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 10/83 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLFCGIGG+ L + ++ +++ Y+ N I+ DI + ++ Sbjct: 5 VVDLFCGIGGLSYGLREA----GLQILAGYDLDQTCAFAYERNNNAQFIYKDIRLVSGKE 60 Query: 64 IP------DHDVLLAGFPCQPFS 80 + D VL PCQPFS Sbjct: 61 VSTLLAETDVKVLAGCAPCQPFS 83 >gi|26990694|ref|NP_746119.1| DNA-cytosine methyltransferase [Pseudomonas putida KT2440] gi|24985686|gb|AAN69583.1|AE016592_2 DNA-cytosine methyltransferase [Pseudomonas putida KT2440] Length = 348 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 16/92 (17%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKT 61 K+ LFCG GG+ L F + F+++ + Y+V+TY N P D+ + Sbjct: 24 KLVSLFCGAGGLDLG----FIDAGFDVVFAADHDRYAVETYNHNHPGQRASKVDLLETSP 79 Query: 62 QDIPDHDVLLAGF-----------PCQPFSQA 82 +++ VL GF PCQ FS+A Sbjct: 80 EELYKRSVLEPGFEGAIHGIIGGPPCQGFSRA 111 >gi|288919493|ref|ZP_06413824.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f] gi|288349096|gb|EFC83342.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f] Length = 640 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 11/85 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI- 64 DLF G GG+ L LEQ + + N +V+T++ANF + D+++ ++ Sbjct: 45 DLFSGAGGLSLGLEQA----GWTVVTAVDDNLRAVETHRANFRGRAVQLDLSEPAARNEL 100 Query: 65 ------PDHDVLLAGFPCQPFSQAG 83 D++ G PCQP+S+AG Sbjct: 101 LASLAGVKIDLVAGGPPCQPYSRAG 125 >gi|281425045|ref|ZP_06255958.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Prevotella oris F0302] gi|281400889|gb|EFB31720.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Prevotella oris F0302] Length = 412 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 31 FSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83 F EI+ + +PN++ + +I K DVL GFPCQPFS AG Sbjct: 30 FHCEISKFCNTILNYWYPNSIGYENIKKTDFSKWQGKIDVLTGGFPCQPFSSAG 83 >gi|213691014|ref|YP_002321600.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522475|gb|ACJ51222.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457065|dbj|BAJ67686.1| putative DNA methylase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 390 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 12/85 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDIAKIK 60 + F GIG RL LE+ H +S++I+ + Y+ F N TLI GD+ ++ Sbjct: 20 EFFAGIGLARLGLEEAGFH----VAWSNDIDHAKCQMYRNQFGNNEQEHTLIEGDMGELH 75 Query: 61 TQDIPDHDVLLA--GFPCQPFSQAG 83 D+P H++ +A PC S AG Sbjct: 76 GSDLP-HNISIAWGSSPCTDISLAG 99 >gi|254932546|ref|ZP_05265905.1| cytosine methyl transferase [Listeria monocytogenes HPB2262] gi|293584103|gb|EFF96135.1| cytosine methyl transferase [Listeria monocytogenes HPB2262] gi|332310737|gb|EGJ23832.1| DNA (Cytosine-5-)-methyltransferase [Listeria monocytogenes str. Scott A] Length = 351 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 11/87 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++ DLFCG+GG+ +++T + +I +Y+ N I DI +I Sbjct: 2 IVNAVDLFCGVGGLTCGVQKT----GINVIAGYDIAKECQYSYEYNNKARFIHKDIKEIS 57 Query: 61 TQDIP-------DHDVLLAGFPCQPFS 80 +I D +L+ PCQPFS Sbjct: 58 DDEISALYPENTDIRLLMGCAPCQPFS 84 >gi|18202008|sp|O31073|MTS1_STRAH RecName: Full=Modification methylase SacI; Short=M.SacI; AltName: Full=Cytosine-specific methyltransferase SacI gi|2605794|gb|AAC97118.1| SacI methylase [Streptomyces achromogenes] Length = 390 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 17/99 (17%) Query: 2 LKITDLFCGIGGIRLDLE--------QTFNHRNVECFFSSEINPYSVKTYQANFPNT-LI 52 L + LF G GG+ +E Q + + +++ ++ T ANFP+T + Sbjct: 5 LPVISLFSGAGGLDCAIESCAEPPLVQDGSGSPLRVAVATDYEQTALDTLSANFPHTKTL 64 Query: 53 FGDIAKIKTQDI--------PDHDVLLAGFPCQPFSQAG 83 GDI I T ++ D +++ G PC PFS++G Sbjct: 65 CGDIQTIPTAELLEAGGLKPGDPTLVIGGPPCTPFSKSG 103 >gi|12275200|emb|CAC22275.1| cytosine methyl transferase [Listeria monocytogenes] Length = 352 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 11/87 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++ DLFCG+GG+ +++T + +I +Y+ N I DI +I Sbjct: 2 IVNAVDLFCGVGGLTCGVQKT----GINVIAGYDIAKECQYSYEYNNKARFIHKDIKEIS 57 Query: 61 TQDIP-------DHDVLLAGFPCQPFS 80 +I D +L+ PCQPFS Sbjct: 58 DDEISALYPENTDIRLLMGCAPCQPFS 84 >gi|2894386|emb|CAA74996.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase (C1) [Bacillus pumilus] Length = 398 Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 8/79 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT--- 61 DLF G GG+ L E E + EI+ ++V TY+ N N+ +I DI +I Sbjct: 12 DLFAGAGGMSLGFENA----GFEIPLAVEIDDWAVDTYRKNRENSNVIKNDILEIDNAFF 67 Query: 62 QDIPDHDVLLAGFPCQPFS 80 + D ++ G PCQ FS Sbjct: 68 KQFSGIDAVIGGPPCQGFS 86 >gi|330936955|gb|EGH41063.1| HsdRM [Pseudomonas syringae pv. pisi str. 1704B] Length = 313 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 7/84 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M LF G GG + + + +++I Y+ + Y AN P T I G + I Sbjct: 1 MPSAVSLFSGCGGSDAGILRA----GFDVLMANDIMHYAREVYLANHPETDYIRGSVTTI 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 ++ P ++L+ +PCQ FSQ G Sbjct: 57 --ENFPAAELLVGCYPCQGFSQGG 78 >gi|317157659|ref|XP_001826363.2| C-5 cytosine-specific DNA methylase [Aspergillus oryzae RIB40] Length = 2165 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 14/78 (17%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT----------QD 63 +R + F R++ FS+EI PY + NF L+F D+ ++K + Sbjct: 129 LRKHFNRDFKFRHL---FSAEIVPYKQRYIDNNFHPRLLFRDVTQLKDRVAQTAYGSLEK 185 Query: 64 IP-DHDVLLAGFPCQPFS 80 +P + D+L+AGF C FS Sbjct: 186 VPRNPDMLIAGFSCVDFS 203 >gi|301382137|ref|ZP_07230555.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato Max13] Length = 320 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAK----IKTQDIPDHDVLLAGFPCQPFSQA 82 +E + +EI+P+ ++P T GD+ K + I DVL+ G PCQ FS A Sbjct: 31 MEPVWFAEIDPFPSAVLAHHYPRTPNLGDMTKLGALVLAGKIDAPDVLVGGTPCQAFSVA 90 Query: 83 G 83 G Sbjct: 91 G 91 >gi|290968468|ref|ZP_06560007.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1 str. 28L] gi|290781464|gb|EFD94053.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1 str. 28L] Length = 699 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 15/92 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNT-LIFGDI-- 56 +I DLFCG GG+ + H+N + +IN +T++ N P + LI GDI Sbjct: 338 FRILDLFCGAGGMSYGM-----HKNSHFVTKVALDINEKLAQTFKENIPESELIIGDIQD 392 Query: 57 AKIKTQDI-----PDHDVLLAGFPCQPFSQAG 83 IK + I ++++ G PCQ FS G Sbjct: 393 KAIKEKIINLSKKNKVNMIIGGPPCQGFSLKG 424 >gi|213968059|ref|ZP_03396204.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato T1] gi|213927039|gb|EEB60589.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato T1] Length = 584 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAK----IKTQDIPDHDVLLAGFPCQPFSQA 82 +E + +EI+P+ ++P T GD+ K + I DVL+ G PCQ FS A Sbjct: 31 MEPVWFAEIDPFPSAVLAHHYPRTPNLGDMTKLGALVLAGKIDAPDVLVGGTPCQAFSVA 90 Query: 83 G 83 G Sbjct: 91 G 91 >gi|311977248|gb|ADQ20503.1| M.BbvI [Brevibacillus brevis] Length = 367 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 15/93 (16%) Query: 6 DLFCGIGGIRLDL-EQTFNHRNV-ECF-----FSSEINPYSVKTYQANF----PNTLIFG 54 +LFCG GG+ L E + H E F ++++I+ ++ +T++ N P++++ G Sbjct: 7 ELFCGPGGLALGAKEAKYMHPETGEVFEFEHAWANDIDEWACETFRTNICPDRPDSVVCG 66 Query: 55 DIAKIKTQDIPDH----DVLLAGFPCQPFSQAG 83 D+ ++ + + + D GFPC +S G Sbjct: 67 DVRELDIKSLGEKFGEIDAFTFGFPCNDYSIVG 99 >gi|284051998|ref|ZP_06382208.1| cytosine-specific methyltransferase [Arthrospira platensis str. Paraca] gi|79835461|gb|ABB52090.1| Mod [Arthrospira platensis] gi|291568828|dbj|BAI91100.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39] Length = 411 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 15/89 (16%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 DLF G GG+ L LE + + E + + NFP I GDI+++K+ +I Sbjct: 9 DLFAGCGGMSLGLEAA----GFDVAVAVEFDAVHCLVHHFNFPYCHTICGDISQVKSAEI 64 Query: 65 PDH----------DVLLAGFPCQPFSQAG 83 D D++ G PCQ FS G Sbjct: 65 LDQLQLKYGHTEVDLIAGGPPCQGFSHIG 93 >gi|462647|sp|P34905|MTB1_BREBE RecName: Full=Modification methylase BbvI; Short=M.BbvI; AltName: Full=Cytosine-specific methyltransferase BbvI Length = 374 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 15/93 (16%) Query: 6 DLFCGIGGIRLDL-EQTFNHRNV-ECF-----FSSEINPYSVKTYQANF----PNTLIFG 54 +LFCG GG+ L E + H E F ++++I+ ++ +T++ N P++++ G Sbjct: 7 ELFCGPGGLALGAKEAKYMHPETGEVFEFEHAWANDIDEWACETFRTNICPDRPDSVVCG 66 Query: 55 DIAKIKTQDIPDH----DVLLAGFPCQPFSQAG 83 D+ ++ + + + D GFPC +S G Sbjct: 67 DVRELDIKSLGEKFGEIDAFTFGFPCNDYSIVG 99 >gi|153933427|ref|YP_001385281.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|153933974|ref|YP_001384769.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|153935154|ref|YP_001386762.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|153935271|ref|YP_001386815.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|153937696|ref|YP_001388073.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|152929471|gb|ABS34971.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|152930018|gb|ABS35518.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|152931068|gb|ABS36567.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|152931185|gb|ABS36684.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|152933610|gb|ABS39109.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] Length = 315 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 12/87 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++I +LF GIG R L V+ EI+ +V++Y A F L + K Sbjct: 1 MIQILELFGGIGAPRKALINL--GVPVKAIDYVEIDEKAVRSYNAIFHKDLAY------K 52 Query: 61 TQDIPDH----DVLLAGFPCQPFSQAG 83 TQ + + D+L+ G PCQ FS AG Sbjct: 53 TQSVVGYNLKPDILIHGSPCQDFSIAG 79 >gi|167771959|ref|ZP_02444012.1| hypothetical protein ANACOL_03332 [Anaerotruncus colihominis DSM 17241] gi|167665757|gb|EDS09887.1| hypothetical protein ANACOL_03332 [Anaerotruncus colihominis DSM 17241] Length = 520 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 28/53 (52%) Query: 31 FSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++SE+ + ++ + FP+ GDI +I I D++ G PCQ S AG Sbjct: 30 WASEVEKFPIEVTKKRFPHMEHLGDITRIDGAKIRPVDIITFGSPCQDLSVAG 82 >gi|296206224|ref|XP_002750114.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase isoform 3 [Callithrix jacchus] Length = 345 Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L++ +L+ G+GG+ L ++ V + ++N + + Y+ NFP+T L+ I I Sbjct: 4 LRVLELYSGVGGMHHALRESCIPAQVVA--AIDVNTVANEVYRFNFPHTQLLAKTIEGIT 61 Query: 61 TQ--DIPDHDVLLAGFPCQPFSQ 81 Q D D++L PCQPF++ Sbjct: 62 LQEFDRLSFDMILMSPPCQPFTR 84 >gi|296206222|ref|XP_002750113.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase isoform 2 [Callithrix jacchus] Length = 367 Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L++ +L+ G+GG+ L ++ V + ++N + + Y+ NFP+T L+ I I Sbjct: 4 LRVLELYSGVGGMHHALRESCIPAQVVA--AIDVNTVANEVYRFNFPHTQLLAKTIEGIT 61 Query: 61 TQ--DIPDHDVLLAGFPCQPFSQ 81 Q D D++L PCQPF++ Sbjct: 62 LQEFDRLSFDMILMSPPCQPFTR 84 >gi|302531731|ref|ZP_07284073.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302440626|gb|EFL12442.1| conserved hypothetical protein [Streptomyces sp. AA4] Length = 357 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 16/89 (17%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAKIKTQD 63 +F G+GG+ L E+ E + E + + T + NFP+ ++I DI + T + Sbjct: 10 VFSGVGGLDLGAEKA----GFEVRAAVERDVNAADTMRKNFPHLAGSVICADILDVPTTE 65 Query: 64 I---------PDHDVLLAGFPCQPFSQAG 83 I D+L+ G PC PFS++G Sbjct: 66 IMAAAGLSRRERPDLLIGGPPCTPFSKSG 94 >gi|73948982|ref|XP_848593.1| PREDICTED: similar to DNA (cytosine-5)-methyltransferase-like protein 2 (Dnmt2) (DNA methyltransferase homolog HsaIIP) (DNA MTase homolog HsaIIP) (M.HsaIIP) (PuMet) isoform 2 [Canis familiaris] Length = 391 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L++ +L+ GIGG+ L ++ V + ++N + + Y+ NFP+T + + Sbjct: 4 LRVLELYSGIGGMHQALRESCIPAQVVA--AIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D +++L PCQPF++ G Sbjct: 62 LEEFDKLSFNMILMSPPCQPFTRIG 86 >gi|313667096|gb|ADR72993.1| M1.BspMI [Bacillus sp. M(2010)] Length = 348 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L + DLF G GG+ + E+ + ++IN KT++ NFPN DI ++ Sbjct: 3 LLVVDLFSGAGGLHIGFEKA--GFEIGLCIDNDIN--VEKTHKYNFPNIPFMNVDIKELS 58 Query: 61 TQDIP------DHDVLLAGFPCQPFSQAG 83 + + + DVL+ G PCQ FS G Sbjct: 59 SDQVRNIIGNREVDVLIGGPPCQGFSTIG 87 >gi|308061350|gb|ADO03238.1| cytosine specific DNA methyltransferase [Helicobacter pylori Cuz20] Length = 355 Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 KI DLFCG GG LE+ + + + + ++ T++ N N T + GDI +I+ Sbjct: 4 KILDLFCGAGGFSAGLERL---KEFDALIGLDCDKQALITFENNHKNATGVCGDITQIEI 60 Query: 62 QD-------IPDHDVLLAGFPCQPFSQAG 83 ++ ++++ G PCQ FS G Sbjct: 61 KEKVIKLAQTLKINMIIGGPPCQGFSNKG 89 >gi|57867437|ref|YP_189088.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis RP62A] gi|57638095|gb|AAW54883.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis RP62A] Length = 335 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++K+ +LF G+G + L + F + + N + GD+ + Sbjct: 4 LIKVLELFSGVGSFSISLNTLGIEHEIVGFSETRKTATQLFCKLHNKKESENLGDVRNVS 63 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +D+ D D+L+ G PCQ F++AG Sbjct: 64 AKDL-DVDLLVFGSPCQSFTRAG 85 >gi|326428358|gb|EGD73928.1| hypothetical protein PTSG_05624 [Salpingoeca sp. ATCC 50818] Length = 512 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 L++ + + GIGG+ L+ V F +IN + K Y+ NFP T ++ I Sbjct: 18 LRVLEFYSGIGGMHAALKVADPTARVLRAF--DINDTANKVYRHNFPETPVWQRLIESIP 75 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + + + D+ L PCQPF++ G Sbjct: 76 RERFEGKLQADMYLMSPPCQPFTRTG 101 >gi|255548992|ref|XP_002515552.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis] gi|223545496|gb|EEF47001.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis] Length = 404 Score = 37.7 bits (86), Expect = 0.49, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 8/85 (9%) Query: 3 KITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +I + + GIGG+R L + N + +E F +IN + Y+ NF + G+I + Sbjct: 14 RILEFYSGIGGMRYSLMKAGVNAKVMEAF---DINNIANDAYEHNFGHRPYQGNIQSLTA 70 Query: 62 QDIPD---HDVLLAGFPCQPFSQAG 83 D+ H LL+ PCQP+++ G Sbjct: 71 ADLDSYAAHAWLLSP-PCQPYTRQG 94 >gi|225681023|gb|EEH19307.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 2092 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 11/62 (17%) Query: 30 FFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD----------IP-DHDVLLAGFPCQP 78 FS+EI+P+ Q NF +IF D+ ++ D +P D D+L+ GF C Sbjct: 155 LFSAEIDPFKQSYIQRNFSPDIIFRDVNELIADDATTAFGSLRKVPADLDLLIVGFSCVD 214 Query: 79 FS 80 FS Sbjct: 215 FS 216 >gi|332217175|ref|XP_003257732.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase [Nomascus leucogenys] Length = 393 Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ +L+ G+GG+ L ++ V + ++N + + Y+ NFP+T + + T Sbjct: 4 VRVLELYSGVGGMHHALRESCIPAQVVA--AIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 62 QDIPDH---DVLLAGFPCQPFSQAG 83 + D D++L PCQPF++ G Sbjct: 62 LEEFDRLSCDMILMSPPCQPFTRIG 86 >gi|296170222|ref|ZP_06851815.1| DNA (cytosine-5-)-methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895098|gb|EFG74816.1| DNA (cytosine-5-)-methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 388 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 9/86 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAK 58 K + F GIG R+ LE+ + ++++ P Y F +T GDI K Sbjct: 13 KAIEFFAGIGLARMGLEKA----GFQVTWANDYEPDKRAMYVGQFGESEGHTFALGDIGK 68 Query: 59 IKTQDIP-DHDVLLAGFPCQPFSQAG 83 +K D+P D + A PC S AG Sbjct: 69 VKAADLPTDAALAWASSPCTDLSLAG 94 >gi|188575624|ref|YP_001912553.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520076|gb|ACD58021.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv. oryzae PXO99A] Length = 395 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 13/83 (15%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDIP 65 +F G GG L + +++EI+P +TY AN P T + DI K+ + I Sbjct: 1 MFAGAGG----LSEGLREAGFTSLYANEISPRYAQTYAANHPATQVDSRDIRKVDARKIR 56 Query: 66 --------DHDVLLAGFPCQPFS 80 + D++ G PCQ FS Sbjct: 57 NLLGLKRGELDLIAGGPPCQGFS 79 >gi|323969240|gb|EGB64542.1| DNA adenine methylase [Escherichia coli TA007] Length = 754 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQAG 83 +EI P+ +P+ GD+ K+ + +I DVL+ G PCQ FS AG Sbjct: 31 AEIEPFPSAVLAHRWPHVANLGDMTKLAKKVLAGEIESPDVLVGGTPCQAFSIAG 85 >gi|323949009|gb|EGB44903.1| DNA adenine methylase [Escherichia coli H252] Length = 762 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQAG 83 +EI P+ +P+ GD+ K+ + +I DVL+ G PCQ FS AG Sbjct: 34 AEIEPFPSAVLAHRWPHVANLGDMTKLAKKVLAGEIESPDVLVGGTPCQAFSIAG 88 >gi|312964273|ref|ZP_07778577.1| DNA adenine methylase family protein [Escherichia coli 2362-75] gi|312290986|gb|EFR18860.1| DNA adenine methylase family protein [Escherichia coli 2362-75] Length = 672 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQAG 83 +EI P+ +P+ GD+ K+ + +I DVL+ G PCQ FS AG Sbjct: 31 AEIEPFPSAVLAHRWPHVANLGDMTKLAKKVLAGEIESPDVLVGGTPCQAFSIAG 85 >gi|331646824|ref|ZP_08347925.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M605] gi|331044366|gb|EGI16495.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M605] Length = 862 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQAG 83 +EI P+ +P+ GD+ K+ + +I DVL+ G PCQ FS AG Sbjct: 31 AEIEPFPSAVLAHRWPHVANLGDMTKLAKKVLAGEIESPDVLVGGTPCQAFSIAG 85 >gi|296242618|ref|YP_003650105.1| DNA-cytosine methyltransferase [Thermosphaera aggregans DSM 11486] gi|296095202|gb|ADG91153.1| DNA-cytosine methyltransferase [Thermosphaera aggregans DSM 11486] Length = 461 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 17/88 (19%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PN-------TLIFG 54 LF G GG LDL + R E +++I + VKTY NF P +I G Sbjct: 4 LFSGAGG--LDLGFVMSGR-FEILAANDIEEHMVKTYSINFGARIIPRLQPRLYPQVILG 60 Query: 55 DIAKIKTQDIPDH--DVLLAGFPCQPFS 80 D++K+ + D +V++ G PCQ FS Sbjct: 61 DVSKVDFSLLKDEGINVVVGGPPCQDFS 88 >gi|218188646|gb|EEC71073.1| hypothetical protein OsI_02832 [Oryza sativa Indica Group] Length = 353 Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRN-VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K+ + + GIGG+R L + VE F +IN + Y+ NF + G+I + Sbjct: 8 KVLEFYSGIGGMRYSLAASGARAEVVEAF---DINDVANDVYELNFGHRPYQGNIQTLTA 64 Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83 D+ + L PCQP+++ G Sbjct: 65 SDLDKYKAQAWLLSPPCQPYTRQG 88 >gi|323186482|gb|EFZ71828.1| DNA adenine methylase family protein [Escherichia coli 1357] Length = 754 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQAG 83 +EI P+ +P+ GD+ K+ + +I DVL+ G PCQ FS AG Sbjct: 31 AEIEPFPSAVLAHRWPHVANLGDMTKLAQKVLAGEIESPDVLVGGTPCQAFSIAG 85 >gi|228950066|ref|ZP_04112251.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228809593|gb|EEM56029.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 445 Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 10/84 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKT 61 ++ +F G GG L+ F+ + + E++P + TY+ N P T ++ DI +K Sbjct: 14 EVIGIFAGCGG----LDTGFSKSDFNVQLAIELDPDACNTYKKNHPETEVWNRDIKTVKG 69 Query: 62 QDIPDHD-----VLLAGFPCQPFS 80 +I +LL G PCQ FS Sbjct: 70 DEIRKLVGNKPLILLGGSPCQSFS 93 >gi|328914001|gb|AEB65597.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens LL3] Length = 600 Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 23/99 (23%) Query: 3 KITDLFCGIGGIRLDLEQT--FNHRNVECFFSSEINPYSVKTYQANF---------PNTL 51 K+ DLF G GG+ EQT F E + EIN +++TY N P+ Sbjct: 12 KLVDLFAGAGGLSKGFEQTGCF-----ETIGAVEINQAAIETYVYNHGGNRDIIIRPDES 66 Query: 52 IFGDIAKI------KTQDI-PDHDVLLAGFPCQPFSQAG 83 DI+KI K+++I P+ ++ G PCQ FS A Sbjct: 67 DTSDISKIDFRKWKKSKNIDPNLLTIIGGPPCQGFSNAN 105 >gi|323485262|ref|ZP_08090612.1| cytosine-specific methyltransferase [Clostridium symbiosum WAL-14163] gi|323401440|gb|EGA93788.1| cytosine-specific methyltransferase [Clostridium symbiosum WAL-14163] Length = 335 Score = 37.7 bits (86), Expect = 0.52, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 12/86 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSS----EINPYSVKTYQANFPNTLIFGDIA 57 L+I +LF GIG R+ L RN+ S EI+ +V++Y A F + Sbjct: 7 LQILELFGGIGSPRVAL------RNIGVSVKSIDYVEIDEKAVRSYNAMFEQESAYSPQT 60 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + PD +L+ G PCQ FS AG Sbjct: 61 VVGWNLQPD--ILIHGSPCQDFSIAG 84 >gi|308175642|ref|YP_003922347.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens DSM 7] gi|307608506|emb|CBI44877.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens DSM 7] gi|328555623|gb|AEB26115.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens TA208] Length = 597 Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 23/99 (23%) Query: 3 KITDLFCGIGGIRLDLEQT--FNHRNVECFFSSEINPYSVKTYQANF---------PNTL 51 K+ DLF G GG+ EQT F E + EIN +++TY N P+ Sbjct: 9 KLVDLFAGAGGLSKGFEQTGCF-----ETIGAVEINQAAIETYVYNHGGNRDIIIRPDES 63 Query: 52 IFGDIAKI------KTQDI-PDHDVLLAGFPCQPFSQAG 83 DI+KI K+++I P+ ++ G PCQ FS A Sbjct: 64 DTSDISKIDFRKWKKSKNIDPNLLTIIGGPPCQGFSNAN 102 >gi|302876780|ref|YP_003845413.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|307687461|ref|ZP_07629907.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|302579637|gb|ADL53649.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] Length = 578 Score = 37.7 bits (86), Expect = 0.52, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%) Query: 30 FFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++SEI P+ V+ P GDI + + D++ G PCQ S AG Sbjct: 29 LWASEIEPFPVRVTTKRLPQVEHLGDITTLNGSTLAPVDIITFGSPCQDMSVAG 82 >gi|325286536|ref|YP_004262326.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489] gi|324321990|gb|ADY29455.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489] Length = 414 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 38/94 (40%), Gaps = 17/94 (18%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 L DLFCG GG+ E F +F + TY+ NF + I GDI + Sbjct: 96 LTSADLFCGAGGMAKGFEMAGFTQVGGLDWFKE-----AGMTYRENFEHPHILGDITERS 150 Query: 61 TQDI-----------PDHDVLLAGFPCQPFSQAG 83 +D VL GFPCQ FS +G Sbjct: 151 VKDKFINTVKSSLNGKPLTVLSGGFPCQGFSMSG 184 >gi|229143653|ref|ZP_04272076.1| DNA-cytosine methyltransferase [Bacillus cereus BDRD-ST24] gi|228639832|gb|EEK96239.1| DNA-cytosine methyltransferase [Bacillus cereus BDRD-ST24] Length = 538 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 14/91 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIF-GDIAK 58 +K+ DLFCG GG + F E + +I ++ T+ N N + F GDI + Sbjct: 1 MKVIDLFCGAGG----FSEGFERAGFEIVRAYDIWAPAILTHNQNHGNGKQIAFKGDIYE 56 Query: 59 IKTQD-------IPDHDVLLAGFPCQPFSQA 82 I D IPD +V++ PC FS + Sbjct: 57 ISMLDNEEFEKWIPDTEVIIGSPPCIAFSNS 87 >gi|326483421|gb|EGE07431.1| C-5 cytosine methyltransferase DmtA [Trichophyton equinum CBS 127.97] Length = 584 Score = 37.7 bits (86), Expect = 0.54, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 9/81 (11%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDI 64 D FCG GG+ +Q ++ ++ + ++ +Y+ANFP+ L ++A+ T + Sbjct: 282 DGFCGAGGVSRGAQQA----GLKLLWAFDKWESAINSYRANFPSCLAEHSEVAQFLTS-L 336 Query: 65 PDH---DVLLAGFPCQPFSQA 82 P DV+ PCQPFS A Sbjct: 337 PREILVDVMHVSPPCQPFSPA 357 >gi|188526860|ref|YP_001909547.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori Shi470] gi|188143100|gb|ACD47517.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori Shi470] Length = 355 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDI--AKI 59 KI DLFCG GG LE + + + + ++ T++ N N + I GDI A+I Sbjct: 4 KILDLFCGAGGFSAGLECL---KEFDALIGLDCDKQALITFENNHKNAMGICGDITQAEI 60 Query: 60 KTQDIP-----DHDVLLAGFPCQPFSQAG 83 K + I + ++++ G PCQ FS G Sbjct: 61 KEKVIKLAQTLEINMIIGGPPCQGFSNKG 89 >gi|222618843|gb|EEE54975.1| hypothetical protein OsJ_02581 [Oryza sativa Japonica Group] Length = 353 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRN-VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K+ + + GIGG+R L + VE F +IN + Y+ NF + G+I + Sbjct: 8 KVLEFYSGIGGMRYSLAASGARAEVVEAF---DINDVANDVYELNFGHRPYQGNIQTLTA 64 Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83 D+ + L PCQP+++ G Sbjct: 65 SDLDKYKAQAWLLSPPCQPYTRQG 88 >gi|167851523|ref|ZP_02477031.1| DNA-cytosine methyltransferase [Burkholderia pseudomallei B7210] Length = 352 Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLFCG GG L F V +++P Y+AN + DI+K+ Sbjct: 9 ISCVDLFCGAGG----LTHGFILEGVPVVAGIDMDPACRFPYEANNQARFVERDISKVTM 64 Query: 62 QDI------PDHDVLLAGFPCQPFS 80 ++ D VL PCQPFS Sbjct: 65 AELNALFGDADLTVLAGCAPCQPFS 89 >gi|317506898|ref|ZP_07964670.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] gi|316254826|gb|EFV14124.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] Length = 331 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 L + ++ G GG LE F H + EI+ + T Q N P+ + GD+ ++ Sbjct: 7 LSVLEICAGAGGQSSGLEMAGFGHA-----LAVEIDKDAAATLQLNRPSWDVHEGDVREV 61 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D+L G PC PFS AG Sbjct: 62 NGREYKGVDLLAGGVPCPPFSIAG 85 >gi|160934346|ref|ZP_02081733.1| hypothetical protein CLOLEP_03217 [Clostridium leptum DSM 753] gi|156867019|gb|EDO60391.1| hypothetical protein CLOLEP_03217 [Clostridium leptum DSM 753] Length = 433 Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 +LF G GG+ L +E+ + E + + T + N PN +I DIA I D+ Sbjct: 105 ELFAGAGGLALGIEEA----GFDTIGLIEFDKAASDTLKCNRPNWRVINDDIANISCLDL 160 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 ++ D+L G PCQ FS AG Sbjct: 161 EEYFNIKKGELDLLSGGAPCQAFSYAG 187 >gi|324516189|gb|ADY46452.1| tRNA (cytosine-5-)-methyltransferase [Ascaris suum] Length = 193 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ +LF GIGG L+++ E + +IN + Y+ NFP T + + T Sbjct: 12 LRCLELFSGIGGFHYALKESGT--RFEMLAAFDINDVANAIYKHNFPCTTVHQCNIQALT 69 Query: 62 QDIPDH---DVLLAGFPCQPFSQAG 83 + D D+ PCQPF++ G Sbjct: 70 SEFYDRQCADLWTMSPPCQPFTKKG 94 >gi|254460591|ref|ZP_05074007.1| C-5 cytosine-specific DNA methylase [Rhodobacterales bacterium HTCC2083] gi|206677180|gb|EDZ41667.1| C-5 cytosine-specific DNA methylase [Rhodobacteraceae bacterium HTCC2083] Length = 384 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 7/83 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 K + F G G + L + +C +++I+P +TY+ N+ L+ GD+A++ Sbjct: 10 KFAEFFSGGGMVHAALGAQW-----DCVLANDIDPMKCETYRQNWGGAHLLEGDVAELPE 64 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 + D++ A PCQ FS AG Sbjct: 65 GTLHQPLDLIWASSPCQDFSLAG 87 >gi|116871711|ref|YP_848492.1| cytosine methyl transferase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740589|emb|CAK19709.1| cytosine methyl transferase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 351 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 11/87 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++ DLFCG+GG+ +++T + +I +Y+ N I DI I Sbjct: 2 IVNAVDLFCGVGGLTCGVQKT----GINVIAGYDIAKECQYSYEYNNKARFIHKDIKDIS 57 Query: 61 TQDIP-------DHDVLLAGFPCQPFS 80 +I D +L+ PCQPFS Sbjct: 58 DNEISALYPENTDIRLLMGCAPCQPFS 84 >gi|332655271|ref|ZP_08421011.1| putative type II DNA modification methyltransferase [Ruminococcaceae bacterium D16] gi|332515776|gb|EGJ45386.1| putative type II DNA modification methyltransferase [Ruminococcaceae bacterium D16] Length = 298 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 10/83 (12%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGGI L E +C E + +++P F DI + + + Sbjct: 8 LFSGIGGIDLAAEAAGFTSVCQC----EWAAFPAAVLASHWPEVPRFQDITTVTKEAFFE 63 Query: 67 HD------VLLAGFPCQPFSQAG 83 ++ GFPCQPFS AG Sbjct: 64 KTGLRTVTLISGGFPCQPFSTAG 86 >gi|330989663|gb|EGH87766.1| cytosine-specific methyltransferase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 512 Score = 37.4 bits (85), Expect = 0.60, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT----QDIPDHDVLLAGFPCQPFSQA 82 +E + +EI P+ ++P T GD+ K+ I DVL+ G PCQ FS A Sbjct: 31 MEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGALALAGKIKAPDVLVGGTPCQAFSVA 90 Query: 83 G 83 G Sbjct: 91 G 91 >gi|330958885|gb|EGH59145.1| cytosine-specific DNA methyltransferase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 458 Score = 37.4 bits (85), Expect = 0.60, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAK----IKTQDIPDHDVLLAGFPCQPFSQA 82 +E + +EI P+ ++P T GD+ K + I DVL+ G PCQ FS A Sbjct: 31 MEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGALVLAGKIEAPDVLVGGTPCQAFSVA 90 Query: 83 G 83 G Sbjct: 91 G 91 >gi|331090172|ref|ZP_08339060.1| hypothetical protein HMPREF1025_02643 [Lachnospiraceae bacterium 3_1_46FAA] gi|330402118|gb|EGG81690.1| hypothetical protein HMPREF1025_02643 [Lachnospiraceae bacterium 3_1_46FAA] Length = 681 Score = 37.4 bits (85), Expect = 0.60, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%) Query: 31 FSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++SEI P+ ++ P +GD++++ I D++ G PCQ S AG Sbjct: 31 WASEIEPFPIRVTTKRLPFMKHYGDVSRMDGGKIEPVDIITFGSPCQDMSIAG 83 >gi|313669224|ref|YP_004049508.1| DNA modification methylase [Neisseria lactamica ST-640] gi|313006686|emb|CBN88152.1| putative DNA modification methylase [Neisseria lactamica 020-06] Length = 330 Score = 37.4 bits (85), Expect = 0.60, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF G GG+ L EQ E + E ++ Y+ NF + + D+ +T Sbjct: 1 MKCIDLFAGCGGLSLGFEQA----GFEVCAAFEKWDKAIDIYRKNFNHPVYETDLTDEQT 56 Query: 62 --QDIPDH--DVLLAGFPCQPFSQAG 83 I ++ D+++ G PCQ FS AG Sbjct: 57 AISQISNYQPDLIMGGPPCQDFSSAG 82 >gi|294637303|ref|ZP_06715601.1| DNA (cytosine-5-)-methyltransferase [Edwardsiella tarda ATCC 23685] gi|291089511|gb|EFE22072.1| DNA (cytosine-5-)-methyltransferase [Edwardsiella tarda ATCC 23685] Length = 722 Score = 37.4 bits (85), Expect = 0.60, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKI----KTQDIPDHDVLLAGFPCQPFSQAG 83 +EI + +P+ + GD+ KI + D+ DVL+ G PCQ FS AG Sbjct: 28 AEIEEFPSAVLAQRWPSVVNLGDMTKIAAAVRAGDVEAPDVLVGGTPCQAFSVAG 82 >gi|315506801|ref|YP_004085688.1| DNA-cytosine methyltransferase [Micromonospora sp. L5] gi|315413420|gb|ADU11537.1| DNA-cytosine methyltransferase [Micromonospora sp. L5] Length = 412 Score = 37.4 bits (85), Expect = 0.61, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 ++ ++ G GG L LE+ F H + E++ + KT + N P+ I GD+A Sbjct: 4 FEVIEICAGAGGQALGLEKAGFEHA-----LAVELDSNACKTLEENRPSWKIAQGDVADE 58 Query: 60 KTQDIPDH---DVLLAGFPCQPFSQAG 83 + DH +L G PC PFS AG Sbjct: 59 EVWRPADHQGVSLLAGGVPCPPFSIAG 85 >gi|309378924|emb|CBX22511.1| putative DNA cytosine methyltransferase [Neisseria lactamica Y92-1009] Length = 330 Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF G GG+ L EQ E + E ++ Y+ NF + + D+ +T Sbjct: 1 MKCIDLFAGCGGLSLGFEQA----GFEVCAAFEKWDKAIDIYRKNFNHPVYETDLTDEQT 56 Query: 62 --QDIPDH--DVLLAGFPCQPFSQAG 83 I ++ D+++ G PCQ FS AG Sbjct: 57 AISQISNYQPDLIMGGPPCQDFSSAG 82 >gi|261401478|ref|ZP_05987603.1| modification methylase HindV [Neisseria lactamica ATCC 23970] gi|269208450|gb|EEZ74905.1| modification methylase HindV [Neisseria lactamica ATCC 23970] Length = 330 Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF G GG+ L EQ E + E ++ Y+ NF + + D+ +T Sbjct: 1 MKCIDLFAGCGGLSLGFEQA----GFEVCAAFEKWDKAIDIYRKNFNHPVYETDLTDEQT 56 Query: 62 --QDIPDH--DVLLAGFPCQPFSQAG 83 I ++ D+++ G PCQ FS AG Sbjct: 57 AISQISNYQPDLIMGGPPCQDFSSAG 82 >gi|72080942|ref|YP_288000.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae 7448] Length = 393 Score = 37.4 bits (85), Expect = 0.61, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 19/92 (20%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIF--GDI--A 57 DLF G GG+ L S +I +V+TY NF N +F GDI + Sbjct: 73 DLFSGAGGLSCGLVMA----GFLPLASLKIMKQAVETYAYNFKKRSKNKELFKLGDIRDS 128 Query: 58 KIKTQDIPDH------DVLLAGFPCQPFSQAG 83 KIK++ DH D++ GFPCQ FS AG Sbjct: 129 KIKSE-FYDHFKDQELDLIAGGFPCQGFSMAG 159 >gi|172039658|ref|YP_001806159.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] gi|171701112|gb|ACB54093.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] Length = 321 Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 +K+ DLF G GG+ L F + + + VK YQ NF + + D+++ Sbjct: 3 MKVIDLFAGCGGLSLG----FQNAGYTILAAYDNWEPVVKIYQKNFKHPIYKWDLSRYEL 58 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ + D+++ G PCQ FS AG Sbjct: 59 YLEEFKSLNPDLIMGGPPCQDFSSAG 84 >gi|21242948|ref|NP_642530.1| cytosine-specific DNA methyltransferase [Xanthomonas axonopodis pv. citri str. 306] gi|21108450|gb|AAM37066.1| cytosine-specific DNA methyltransferase [Xanthomonas axonopodis pv. citri str. 306] Length = 487 Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAK----IKTQDIPDHDVLLAGFPCQPFSQAG 83 SE + ++ +P+ GD+ + I+ + +P D+L+ G PCQ FS AG Sbjct: 38 SETDAFASAVLAHRYPHVPNLGDMTRLAQRIRDRSVPAPDILVGGTPCQSFSVAG 92 >gi|326469309|gb|EGD93318.1| hypothetical protein TESG_00865 [Trichophyton tonsurans CBS 112818] Length = 584 Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 9/81 (11%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDI 64 D FCG GG+ +Q ++ ++ + ++ +Y+ANFP+ L ++A+ T + Sbjct: 282 DGFCGAGGVSRGAQQA----GLKLLWAFDKWESAINSYRANFPSCLAEHSEVAQFLTS-L 336 Query: 65 PDH---DVLLAGFPCQPFSQA 82 P DV+ PCQPFS A Sbjct: 337 PREILVDVIHVSPPCQPFSPA 357 >gi|220924842|ref|YP_002500144.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060] gi|219949449|gb|ACL59841.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060] Length = 361 Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 10/86 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + DLFCG GG+ L + S +I+ +Y+ N P L D+A + Sbjct: 5 VVDLFCGCGGLSLGARNA----GFKIGLSVDIDAVLTSSYKENHPGAHLRLMDVAALTGS 60 Query: 63 DIPD-----HDVLLAGFPCQPFSQAG 83 D+ D ++ G PCQ FS+ G Sbjct: 61 DVRTVVGGRVDGIIGGPPCQGFSEIG 86 >gi|163738696|ref|ZP_02146110.1| DNA-cytosine methyltransferase [Phaeobacter gallaeciensis BS107] gi|163741592|ref|ZP_02148983.1| DNA modification methylase M.NGOI [Phaeobacter gallaeciensis 2.10] gi|161385326|gb|EDQ09704.1| DNA modification methylase M.NGOI [Phaeobacter gallaeciensis 2.10] gi|161388024|gb|EDQ12379.1| DNA-cytosine methyltransferase [Phaeobacter gallaeciensis BS107] Length = 324 Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK 58 ML +L G GG L LE+ F+H + EI+ + T + N P ++ D+ Sbjct: 1 MLTSVELCAGAGGQALGLEKAGFDHTAL-----VEIDKHCCATLRHNRPQWNVLEEDVRA 55 Query: 59 IKTQDIPDH--DVLLAGFPCQPFSQAG 83 K + H D+L G PC PFS AG Sbjct: 56 FKEEADAYHGIDLLAGGLPCPPFSVAG 82 >gi|320040099|gb|EFW22033.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 2095 Score = 37.4 bits (85), Expect = 0.63, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 11/63 (17%) Query: 30 FFSSEINPYSVKTYQANFPNTLIFGDIAKI----------KTQDIPDH-DVLLAGFPCQP 78 FS+EI P+ Q NF ++F D+ ++ + +P + D+L+AGF C Sbjct: 176 LFSAEIEPFKQSYIQRNFSPAILFRDVNELVNDEATTAFGSMRKVPTNLDLLVAGFSCVD 235 Query: 79 FSQ 81 FSQ Sbjct: 236 FSQ 238 >gi|308062920|gb|ADO04807.1| cytosine specific DNA methyltransferase [Helicobacter pylori Sat464] Length = 355 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61 KI DLFCG GG LE + + + + ++ T++ N N + I GDI +I+ Sbjct: 4 KILDLFCGAGGFSAGLECL---KEFDALIGLDCDKQALITFENNHKNAIGICGDITQIEI 60 Query: 62 QD-------IPDHDVLLAGFPCQPFSQAG 83 ++ + ++++ G PCQ FS G Sbjct: 61 KEKVIKLAQTLEINMIIGGPPCQGFSNKG 89 >gi|261393337|emb|CAX50970.1| putative type II restriction-modification system enzyme Mod [Neisseria meningitidis 8013] Length = 330 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF G GG+ L EQ E + E ++ Y+ NF + + D+ +T Sbjct: 1 MKCIDLFAGCGGLSLGFEQA----GFEVCAAFEKWDKAIDIYRKNFNHPVYETDLTDEQT 56 Query: 62 --QDIPDH--DVLLAGFPCQPFSQAG 83 I ++ D+++ G PCQ FS AG Sbjct: 57 AISQISNYQPDLIMGGPPCQDFSSAG 82 >gi|320009547|gb|ADW04397.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC 33331] Length = 431 Score = 37.4 bits (85), Expect = 0.63, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 16/92 (17%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI 59 L++ ++ G GG L LE+ F H + E++P + +T + N P + GD+A Sbjct: 4 LQVAEICAGAGGQALGLERAGFEHA-----VAVELDPTAAQTLKRNMPGCDVRTGDVADR 58 Query: 60 KTQDIPDH--------DVLLAGFPCQPFSQAG 83 D P+ D++ G PC PF+ AG Sbjct: 59 SIWD-PEQFCAEHGTPDLIAGGVPCPPFTIAG 89 >gi|303312199|ref|XP_003066111.1| DNA repair helicase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240105773|gb|EER23966.1| DNA repair helicase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 2149 Score = 37.4 bits (85), Expect = 0.63, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 11/63 (17%) Query: 30 FFSSEINPYSVKTYQANFPNTLIFGDIAKI----------KTQDIPDH-DVLLAGFPCQP 78 FS+EI P+ Q NF ++F D+ ++ + +P + D+L+AGF C Sbjct: 176 LFSAEIEPFKQSYIQRNFSPAILFRDVNELVNDEATTAFGSMRKVPTNLDLLVAGFSCVD 235 Query: 79 FSQ 81 FSQ Sbjct: 236 FSQ 238 >gi|163855609|ref|YP_001629907.1| putative C-5 cytosine-specific DNA methylase [Bordetella petrii DSM 12804] gi|163259337|emb|CAP41637.1| putative C-5 cytosine-specific DNA methylase [Bordetella petrii] Length = 189 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKTQDI----PDHDVLLAGFPCQPFSQAG 83 SEI+P+ ++P+ GD+ I Q + P D+L+ G PCQ FS AG Sbjct: 33 SEIDPFPNAVLAHHYPDVPNLGDMTGIADQILAGTAPAPDILVGGTPCQAFSVAG 87 >gi|119193294|ref|XP_001247253.1| hypothetical protein CIMG_01024 [Coccidioides immitis RS] Length = 2097 Score = 37.4 bits (85), Expect = 0.63, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 11/63 (17%) Query: 30 FFSSEINPYSVKTYQANFPNTLIFGDIAKI----------KTQDIPDH-DVLLAGFPCQP 78 FS+EI P+ Q NF ++F D+ ++ + +P + D+L+AGF C Sbjct: 210 LFSAEIEPFKQSYIQRNFSPAILFRDVNELVNDEATTAFGSMRKVPTNPDLLVAGFSCVD 269 Query: 79 FSQ 81 FSQ Sbjct: 270 FSQ 272 >gi|288929280|ref|ZP_06423125.1| modification methylase HphIA (Cytosine-specific methyltransferase HphIA) [Prevotella sp. oral taxon 317 str. F0108] gi|288329382|gb|EFC67968.1| modification methylase HphIA (Cytosine-specific methyltransferase HphIA) [Prevotella sp. oral taxon 317 str. F0108] Length = 370 Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 + DLF G GG + E+ H + EI+ TY N N L+ DI + + Sbjct: 6 VIDLFAGCGGFSIGFEKAGFH----VTKAVEIDKQIAHTYSMNHANVLMLNDDIGSVDNE 61 Query: 63 ---DIPDHDVLLAGFPCQPFSQAG 83 + +V++ G PCQ FS AG Sbjct: 62 YNFTRGEAEVIVGGPPCQGFSMAG 85 >gi|218884576|ref|YP_002428958.1| Cytosine-specific DNA methylase [Desulfurococcus kamchatkensis 1221n] gi|218766192|gb|ACL11591.1| Cytosine-specific DNA methylase [Desulfurococcus kamchatkensis 1221n] Length = 324 Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K D+F G GG L T +++ P ++ TY+ NFP+ L+ + K + Sbjct: 6 KYIDVFSGAGGFSLGFHLTGRFKSLLAI--DNFKPAAL-TYKTNFPHALVVNEDVKELDK 62 Query: 63 DI------PDH-DVLLAGFPCQPFSQA 82 ++ PD DV++ PC+PF+ A Sbjct: 63 ELLTGIVKPDEIDVIIGSPPCEPFTGA 89 >gi|167646223|ref|YP_001683886.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] gi|167348653|gb|ABZ71388.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] Length = 387 Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 8/86 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAK 58 M + F G G R L + C F+++ + TYQ N+ L GD+ + Sbjct: 1 MPSFYEFFAGGGMARAGLGDEWT-----CLFANDFDAKKGMTYQRNWGADGELHIGDVKQ 55 Query: 59 IKTQDIP-DHDVLLAGFPCQPFSQAG 83 +KT+ + + D++ FPCQ S AG Sbjct: 56 VKTKQLRGEPDLVWGSFPCQDLSLAG 81 >gi|309776146|ref|ZP_07671137.1| CPG DNA methylase [Erysipelotrichaceae bacterium 3_1_53] gi|308916097|gb|EFP61846.1| CPG DNA methylase [Erysipelotrichaceae bacterium 3_1_53] Length = 456 Score = 37.4 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%) Query: 17 DLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPC 76 +++ F+ +N + + P +K Y + G+I+ I D+P+ D+L FPC Sbjct: 86 EMDVGFDFKNDRHTITEKTRPAILKKYYLANILSGNLGNISHIHAADLPEVDLLTYSFPC 145 Query: 77 QPFSQAG 83 Q S+AG Sbjct: 146 QDLSKAG 152 >gi|293417389|ref|ZP_06660013.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185] gi|291430909|gb|EFF03905.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185] Length = 345 Score = 37.4 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DLFCG GG+ L+Q ++ +I Y++N I DI+ + Sbjct: 3 VKVVDLFCGAGGLTHGLKQA----GLDVVAGIDIESACRVAYESNNSALFIEKDISLVTK 58 Query: 62 QDIPDH------DVLLAGFPCQPFSQ 81 ++ D VL PCQPFS+ Sbjct: 59 DELNDLFEGAQVRVLAGCAPCQPFSR 84 >gi|160945835|ref|ZP_02093061.1| hypothetical protein FAEPRAM212_03368 [Faecalibacterium prausnitzii M21/2] gi|158443566|gb|EDP20571.1| hypothetical protein FAEPRAM212_03368 [Faecalibacterium prausnitzii M21/2] Length = 298 Score = 37.4 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 10/83 (12%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGGI L E +C E + +++P F DI + + + Sbjct: 8 LFSGIGGIDLAAEAAGFTSVCQC----EWAAFPAAVLASHWPEVPRFQDITTVTKEAFFE 63 Query: 67 HD------VLLAGFPCQPFSQAG 83 ++ GFPCQPFS AG Sbjct: 64 KTGLRTVTLISGGFPCQPFSTAG 86 >gi|33323568|gb|AAQ07538.1|AF503408_62 Dam [Enterobacteria phage P7] Length = 672 Score = 37.4 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAK----IKTQDIPDHDVLLAGFPCQPFSQAG 83 +EI P+ +P+ GD+ K ++ +I DVL+ G PCQ FS AG Sbjct: 31 AEIEPFPSAVLAHRWPHVANLGDMTKLAQKVQAGEIEAPDVLVGGTPCQAFSIAG 85 >gi|302134308|ref|ZP_07260298.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 584 Score = 37.4 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAK----IKTQDIPDHDVLLAGFPCQPFSQA 82 +E + +EI P+ ++P T GD+ K + I DVL+ G PCQ FS A Sbjct: 31 MEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGALVLAGKIDAPDVLVGGTPCQAFSVA 90 Query: 83 G 83 G Sbjct: 91 G 91 >gi|302058959|ref|ZP_07250500.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato K40] Length = 498 Score = 37.4 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAK----IKTQDIPDHDVLLAGFPCQPFSQA 82 +E + +EI P+ ++P T GD+ K + I DVL+ G PCQ FS A Sbjct: 31 MEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGALVLAGKIDAPDVLVGGTPCQAFSVA 90 Query: 83 G 83 G Sbjct: 91 G 91 >gi|213967437|ref|ZP_03395585.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato T1] gi|213927738|gb|EEB61285.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato T1] Length = 498 Score = 37.4 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAK----IKTQDIPDHDVLLAGFPCQPFSQA 82 +E + +EI P+ ++P T GD+ K + I DVL+ G PCQ FS A Sbjct: 31 MEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGALVLAGKIDAPDVLVGGTPCQAFSVA 90 Query: 83 G 83 G Sbjct: 91 G 91 >gi|266622011|ref|ZP_06114946.1| site-specific DNA-methyltransferase [Clostridium hathewayi DSM 13479] gi|288866294|gb|EFC98592.1| site-specific DNA-methyltransferase [Clostridium hathewayi DSM 13479] Length = 298 Score = 37.4 bits (85), Expect = 0.67, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 10/83 (12%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGGI L E +C E Y + ++P F DI + + + Sbjct: 9 LFTGIGGIDLAAEAAGFTTVCQC----EWADYPTAVLEKHWPLVPRFRDITTVTKEAFIE 64 Query: 67 HD------VLLAGFPCQPFSQAG 83 +L GFPCQPFS G Sbjct: 65 KTGRKEITLLSGGFPCQPFSSVG 87 >gi|313886989|ref|ZP_07820689.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas asaccharolytica PR426713P-I] gi|312923515|gb|EFR34324.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas asaccharolytica PR426713P-I] Length = 349 Score = 37.4 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 10/83 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLFCGIGG+ L+ +E +++ Y+ N I+ DI + + Sbjct: 5 VVDLFCGIGGLSYGLKTA----GLEVLAGYDLDQTCAFAYEKNNNAQFIYKDIRSVCGGE 60 Query: 64 IP------DHDVLLAGFPCQPFS 80 + D VL PCQPFS Sbjct: 61 VSSLLDGVDIKVLAGCAPCQPFS 83 >gi|319939117|ref|ZP_08013481.1| modification methylase BsuRI [Streptococcus anginosus 1_2_62CV] gi|319812167|gb|EFW08433.1| modification methylase BsuRI [Streptococcus anginosus 1_2_62CV] Length = 434 Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 25/43 (58%) Query: 41 KTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +TY+ NFP +I K P++++ + GFPC FS+AG Sbjct: 126 ETYKKNFPPNIIQHQKDIRKVAHFPNNELTVGGFPCPGFSEAG 168 >gi|194303019|ref|YP_002014288.1| gp72 [Mycobacterium phage Boomer] gi|194153067|gb|ACF34134.1| gp72 [Mycobacterium phage Boomer] Length = 475 Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 ML + D+FCG GG Q +E ++ +V+T+ AN P T I D+++I Sbjct: 1 MLTLLDMFCGAGGSSTGAVQV---PGIEVRVAANHWKLAVETHGANHPTTDHICADLSQI 57 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 + P+ D+L A C S A Sbjct: 58 DPRLFPNTDILWASPSCTKHSIA 80 >gi|170063953|ref|XP_001867327.1| DNA (cytosine-5)-methyltransferase [Culex quinquefasciatus] gi|167881402|gb|EDS44785.1| DNA (cytosine-5)-methyltransferase [Culex quinquefasciatus] Length = 345 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKT 61 ++ +LF GIGG+ + + + + EINP + Y NF P +I + Sbjct: 17 RVLELFSGIGGMHYAIRRA--GKPFRVVAAMEINPVANTIYNHNFGPGAATNSNILSLTP 74 Query: 62 QDIPD--HDVLLAGFPCQPFSQAG 83 + I +V+L PCQPF++ G Sbjct: 75 ERIDQLGANVILMSPPCQPFTRNG 98 >gi|145592040|ref|YP_001154042.1| DNA-cytosine methyltransferase [Pyrobaculum arsenaticum DSM 13514] gi|145283808|gb|ABP51390.1| DNA-cytosine methyltransferase [Pyrobaculum arsenaticum DSM 13514] Length = 318 Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 4/53 (7%) Query: 34 EINPYSVKTYQANFPNTLIFG-DIAKIKTQDIPDH---DVLLAGFPCQPFSQA 82 +++ +V+TY AN NT++ DI ++ +D+ + DVL+ PC+PF+ A Sbjct: 30 DVDRDAVRTYSANHVNTVVLQRDIREVSYEDLVKYGEADVLIGSPPCEPFTSA 82 >gi|109522148|ref|YP_655825.1| gp64 [Mycobacterium phage PMC] gi|91980848|gb|ABE67565.1| gp64 [Mycobacterium phage PMC] Length = 475 Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 ML + D+FCG GG Q +E ++ +V+T+ AN P T I D+++I Sbjct: 1 MLTLLDMFCGAGGSSTGAVQV---PGIEVRVAANHWKLAVETHGANHPTTDHICADLSQI 57 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 + P+ D+L A C S A Sbjct: 58 DPRLFPNTDILWASPSCTKHSIA 80 >gi|325093103|gb|EGC46413.1| SNF2 family helicase [Ajellomyces capsulatus H88] Length = 2239 Score = 37.4 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 14/72 (19%) Query: 20 QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----------KTQDIPDH-D 68 Q FN R++ FS+EI+P+ Q NF +IF D+ ++ + +P D Sbjct: 209 QKFNMRHL---FSAEIDPFKQSYIQRNFSPDIIFRDVNELIADEAVTAFGSLRKVPSTLD 265 Query: 69 VLLAGFPCQPFS 80 +L+ GF C FS Sbjct: 266 LLVVGFSCVDFS 277 >gi|260796005|ref|XP_002592995.1| hypothetical protein BRAFLDRAFT_275730 [Branchiostoma floridae] gi|229278219|gb|EEN49006.1| hypothetical protein BRAFLDRAFT_275730 [Branchiostoma floridae] Length = 386 Score = 37.4 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L++ + + G+GG+ + ++ V + +IN + Y+ NFP+ L+ DI IK Sbjct: 11 LRVVEFYSGVGGMHYAVLESKVPATVVA--ALDINTTANAVYRHNFPHVNLLQRDITGIK 68 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 + + DV + PCQPF++ G Sbjct: 69 LPEFQSWNADVFMMSPPCQPFTRVG 93 >gi|302551692|ref|ZP_07304034.1| modification methylase NaeI [Streptomyces viridochromogenes DSM 40736] gi|302469310|gb|EFL32403.1| modification methylase NaeI [Streptomyces viridochromogenes DSM 40736] Length = 415 Score = 37.4 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 9/86 (10%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK-- 58 + ++ G GG L LE F+H + E++ +V T +AN ++ GD+A Sbjct: 1 MSAVEICAGAGGQSLGLELAGFDHA-----VAVELDENAVNTLRANRDWRVVHGDVADED 55 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 K D D+L G PC PFS AG Sbjct: 56 LWKPGKYIDIDLLAGGVPCPPFSIAG 81 >gi|257440558|ref|ZP_05616313.1| type II DNA modification methyltransferase [Faecalibacterium prausnitzii A2-165] gi|257196997|gb|EEU95281.1| type II DNA modification methyltransferase [Faecalibacterium prausnitzii A2-165] Length = 297 Score = 37.4 bits (85), Expect = 0.71, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGGI L E +C +++ + +++P F DI + + + Sbjct: 8 LFSGIGGIDLAAEAAGFTSVCQCEWAA----FPAAVLASHWPEVPRFQDITTVTKEAFFE 63 Query: 67 HD------VLLAGFPCQPFSQAG 83 ++ GFPCQPFS AG Sbjct: 64 KTGLRTVTLISGGFPCQPFSTAG 86 >gi|54020626|ref|YP_116141.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae 232] gi|53987799|gb|AAV28000.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232] Length = 416 Score = 37.4 bits (85), Expect = 0.71, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 43/92 (46%), Gaps = 19/92 (20%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIF--GDI--A 57 DLF G GG+ L S EI + +TY NF N +F GDI + Sbjct: 96 DLFSGAGGLSCGLVMA----GFLPLASLEIMKQAFETYAYNFKKRSKNKELFKLGDIRDS 151 Query: 58 KIKTQDIPDH------DVLLAGFPCQPFSQAG 83 KIK++ DH D++ GFPCQ FS AG Sbjct: 152 KIKSE-FYDHFKDQELDLIAGGFPCQGFSMAG 182 >gi|228473386|ref|ZP_04058140.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga gingivalis ATCC 33624] gi|228275288|gb|EEK14086.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga gingivalis ATCC 33624] Length = 358 Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 9/85 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 ML D+F G GG+ L E ++ + EINP + K++ N + GDI I Sbjct: 1 MLYGIDIFSGAGGLSLGAEMA----GIQICYGIEINPSAAKSFTRNHKGAKVLQGDIKDI 56 Query: 60 KTQDIPDHD----VLLAGFPCQPFS 80 + + +++ G PCQ FS Sbjct: 57 DPSKLKEGIDPVFIIMGGPPCQGFS 81 >gi|295104078|emb|CBL01622.1| Site-specific DNA methylase [Faecalibacterium prausnitzii SL3/3] Length = 298 Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGGI L E +C +++ + +++P F DI + + + Sbjct: 8 LFSGIGGIDLAAEAAGFTSVCQCEWAA----FPAAVLASHWPEVPRFQDITTVTKEAFFE 63 Query: 67 HD------VLLAGFPCQPFSQAG 83 ++ GFPCQPFS AG Sbjct: 64 KTGLRTVTLISGGFPCQPFSTAG 86 >gi|168697993|ref|ZP_02730270.1| DNA methyltransferase [Gemmata obscuriglobus UQM 2246] Length = 489 Score = 37.4 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%) Query: 31 FSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 F SEI+ + ++P+T GD I D+L+ G PCQ FS AG Sbjct: 26 FFSEIDNFPRAVLAHHYPHTPCHGDFTTIGKDTYDPIDLLVGGTPCQSFSVAG 78 >gi|134287405|ref|YP_001110788.1| putative cytosine-C5 specific DNA methylase [Clostridium phage phiC2] gi|93117243|gb|ABE99533.1| putative cytosine-C5 specific DNA methylase [Clostridium phage phiC2] Length = 316 Score = 37.4 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 16/29 (55%), Positives = 20/29 (68%) Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI +I+T++IP DV GFPCQ S AG Sbjct: 37 DIREIRTENIPRADVWCFGFPCQDISVAG 65 >gi|17225517|gb|AAL37447.1|AF328915_1 cytosine-specific DNA methyltransferase [Helicobacter pylori] Length = 361 Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 KI DLFCG GG LE + + + + ++ T++ N N T I GDI +I+ Sbjct: 4 KILDLFCGAGGFSAGLECL---KEFDALIGLDCDKQALITFENNHKNATGICGDITQIEI 60 Query: 62 QD-------IPDHDVLLAGFPCQPFSQAG 83 ++ + ++++ G PCQ FS G Sbjct: 61 KEKVIKLAQTLEINMIIGGPPCQGFSNKG 89 >gi|326573696|gb|EGE23654.1| DNA-cytosine methyltransferase [Moraxella catarrhalis O35E] Length = 408 Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Query: 2 LKITDLFCGIGGIRLDLEQ-TFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAK 58 +++ +F GIG I L++ NH V F+++I+ + K+Y AN+ DI Sbjct: 34 IRLATVFSGIGAIEQALKRLNLNHSIV---FANDIDNFVKKSYLANYELDEKNWHSDITT 90 Query: 59 IKTQDIPDH-DVLLAGFPCQPFSQAG 83 + D+L+ G PCQ FS G Sbjct: 91 FDATPYKNQVDILVGGSPCQAFSMVG 116 >gi|240275730|gb|EER39243.1| DNA repair protein RAD8 [Ajellomyces capsulatus H143] Length = 1838 Score = 37.4 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 14/72 (19%) Query: 20 QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----------KTQDIPDH-D 68 Q FN R++ FS+EI+P+ Q NF +IF D+ ++ + +P D Sbjct: 148 QKFNMRHL---FSAEIDPFKQSYIQRNFSPDIIFRDVNELIADEAVTAFGSLRKVPSTLD 204 Query: 69 VLLAGFPCQPFS 80 +L+ GF C FS Sbjct: 205 LLVVGFSCVDFS 216 >gi|108562472|ref|YP_626788.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1] gi|107836245|gb|ABF84114.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1] Length = 355 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAK--- 58 KI DLFCG GG LE+ + + + ++ T++ N N + + GDI + Sbjct: 4 KILDLFCGAGGFSAGLERL---EEFDALIGLDCDKQALITFENNHKNAIGVCGDITQTEI 60 Query: 59 ----IKTQDIPDHDVLLAGFPCQPFSQAG 83 IK + ++++ G PCQ FS G Sbjct: 61 KEKVIKLAKKLEINMIIGGPPCQGFSNKG 89 >gi|238059022|ref|ZP_04603734.1| DNA-cytosine methyltransferase [Micromonospora sp. ATCC 39149] gi|237886458|gb|EEP75286.1| DNA-cytosine methyltransferase [Micromonospora sp. ATCC 39149] Length = 442 Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 16/85 (18%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDI 64 DLF G GG L Q F E +S+I+P + T+ NFP I GD I+ ++ Sbjct: 3 DLFAGAGG----LSQGFQQAGFEIAGASDIDPDACATFALNFPGAQAICGD---IRRPEL 55 Query: 65 PDHDVLLAGF--------PCQPFSQ 81 +H + + PCQ FSQ Sbjct: 56 HEHIIEVGRGVDVVVGGPPCQAFSQ 80 >gi|160943738|ref|ZP_02090969.1| hypothetical protein FAEPRAM212_01233 [Faecalibacterium prausnitzii M21/2] gi|158444912|gb|EDP21915.1| hypothetical protein FAEPRAM212_01233 [Faecalibacterium prausnitzii M21/2] Length = 298 Score = 37.0 bits (84), Expect = 0.78, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGGI L E +C +++ + +++P F DI + + + Sbjct: 8 LFSGIGGIDLAAEAAGFTSVCQCEWAA----FPAAVLASHWPEVPHFQDITTVTKEAFFE 63 Query: 67 HD------VLLAGFPCQPFSQAG 83 ++ GFPCQPFS AG Sbjct: 64 KTGLRTVTLISGGFPCQPFSTAG 86 >gi|46200907|ref|ZP_00207896.1| COG0270: Site-specific DNA methylase [Magnetospirillum magnetotacticum MS-1] Length = 561 Score = 37.0 bits (84), Expect = 0.78, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 31 FSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83 F +EI P+ ++P+ GD+ I Q DVL+ G PCQ FS AG Sbjct: 50 FFAEIEPFPSAVLAHHYPHVPNLGDMTAIDGQAWRGKIDVLVGGTPCQAFSVAG 103 >gi|316970903|gb|EFV54759.1| putative PWWP domain protein [Trichinella spiralis] Length = 613 Score = 37.0 bits (84), Expect = 0.80, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI- 59 +++ LF GI ++ L++ N+E ++S EI+ ++ + N N +++ GD+ I Sbjct: 326 IRVLSLFDGIATGKIALDEL--GINIEIYYSCEIDQEALLVTKVNHENQIVYLGDVRGIT 383 Query: 60 --KTQDIPDHDVLLAGFPCQPFSQA 82 K ++I D+L+ G PC S A Sbjct: 384 REKLEEISPIDLLIGGSPCNDVSIA 408 >gi|332970699|gb|EGK09680.1| modification methylase HphIA [Kingella kingae ATCC 23330] Length = 149 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 11/87 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQ 62 + DLFCG GG+ L F + + ++KTY A NT I D+ + Sbjct: 7 VLDLFCGCGGLSLG----FIQAGFDVKLGIDAWQDAIKTYTATHQNTQGIVADLFTTTPE 62 Query: 63 DIPDH------DVLLAGFPCQPFSQAG 83 I DV++ G PCQ FS AG Sbjct: 63 QISQQTQINQIDVIIGGPPCQGFSIAG 89 >gi|300957407|ref|ZP_07169621.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 175-1] gi|300315842|gb|EFJ65626.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 175-1] Length = 343 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLFCG GG+ L+Q+ ++ +I ++ N I DI +K Sbjct: 3 IKAVDLFCGAGGLTHGLKQS----GIDVVAGYDIEETCRFAFEFNNNAVFINQDITVLKG 58 Query: 62 QDIPDH----DV-LLAG-FPCQPFSQAG 83 + I H DV +LAG PCQPFS G Sbjct: 59 EQILSHFKDSDVTILAGCAPCQPFSTYG 86 >gi|257440380|ref|ZP_05616135.1| type II DNA modification methyltransferase [Faecalibacterium prausnitzii A2-165] gi|257197226|gb|EEU95510.1| type II DNA modification methyltransferase [Faecalibacterium prausnitzii A2-165] Length = 298 Score = 37.0 bits (84), Expect = 0.80, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 10/83 (12%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGGI L E +C E + +++P F DI + + + Sbjct: 8 LFSGIGGIDLAAEAAGFTSVCQC----EWAAFPAAVLASHWPEVPRFQDITTVTKEAFFE 63 Query: 67 HD------VLLAGFPCQPFSQAG 83 ++ GFPCQPFS AG Sbjct: 64 KTGLRTVTLISGGFPCQPFSTAG 86 >gi|170079525|ref|YP_001736159.1| cytosine-specific methyltransferase [Synechococcus sp. PCC 7002] gi|169887194|gb|ACB00904.1| Cytosine-specific methyltransferase [Synechococcus sp. PCC 7002] Length = 270 Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 10/91 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE----CFFSSEINPYSV----KTYQANFPNTLI 52 ML+ +LF GIGG + + F + +E C + ++V Y FP I Sbjct: 1 MLRHCELFGGIGGFSHAVAKYFP-KTIETTTYCDIDEQARSFAVPGGSAVYSEFFPKVTI 59 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI Q + D++ GFPC SQAG Sbjct: 60 HKDIRTYYPQQ-KEFDLITCGFPCTGTSQAG 89 >gi|70731152|ref|YP_260893.1| DNA-cytosine methyltransferase [Pseudomonas fluorescens Pf-5] gi|68345451|gb|AAY93057.1| DNA-cytosine methyltransferase [Pseudomonas fluorescens Pf-5] Length = 551 Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQAG 83 +EI P+ ++P GD+ K+ Q I D+L+ G PCQ FS AG Sbjct: 30 AEIEPFPSTVLAHHYPEIPNHGDMTKLGAQVLAGKIAAPDILVGGTPCQAFSVAG 84 >gi|257386518|ref|YP_003176291.1| DNA-cytosine methyltransferase [Halomicrobium mukohataei DSM 12286] gi|257168825|gb|ACV46584.1| DNA-cytosine methyltransferase [Halomicrobium mukohataei DSM 12286] Length = 452 Score = 37.0 bits (84), Expect = 0.82, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L DLFCG GG L Q + E + + + TY+AN + GDI + + Sbjct: 6 LTAIDLFCGAGG----LSQGLHDAGFETLWGIDHEENTKPTYEANHDCEMTVGDIREEEP 61 Query: 62 QDI----PDHDVLLAGFPCQPFSQAG 83 D+ + D++ G PC FS G Sbjct: 62 PDLGLEEGELDLVAGGPPCPTFSLVG 87 >gi|168467807|ref|ZP_02701644.1| Dmt [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195629099|gb|EDX48473.1| Dmt [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 819 Score = 37.0 bits (84), Expect = 0.82, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKT----QDIPDHDVLLAGFPCQPFSQAG 83 SEI P+ +P GD+ KI ++ D+L+ G PCQ FS AG Sbjct: 31 SEIEPFPCAVLAERWPEVPNLGDMTKIAASIAANEVAAPDLLVGGTPCQAFSIAG 85 >gi|114629604|ref|XP_001151712.1| PREDICTED: DNA methyltransferase 2 isoform 2 [Pan troglodytes] gi|119606625|gb|EAW86219.1| hCG23994, isoform CRA_c [Homo sapiens] gi|167887562|gb|ACA05986.1| tRNA aspartic acid methyltransferase 1 variant 1 [Homo sapiens] Length = 345 Score = 37.0 bits (84), Expect = 0.82, Method: Compositional matrix adjust. Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L++ +L+ G+GG+ L ++ V + ++N + + Y+ NFP+T + + Sbjct: 4 LRVLELYSGVGGMHHALRESCIPAQVVA--AIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQ 81 ++ D D++L PCQPF++ Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTR 84 >gi|296114006|ref|YP_003627944.1| DNA-cytosine methyltransferase [Moraxella catarrhalis RH4] gi|295921700|gb|ADG62051.1| DNA-cytosine methyltransferase [Moraxella catarrhalis RH4] Length = 410 Score = 37.0 bits (84), Expect = 0.83, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Query: 2 LKITDLFCGIGGIRLDLEQ-TFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAK 58 +++ +F GIG I L++ NH V F+++I+ + K+Y AN+ DI Sbjct: 36 IRLATVFSGIGAIEQALKRLNLNHSIV---FANDIDNFVKKSYLANYELDEKNWHSDITT 92 Query: 59 IKTQDIPDH-DVLLAGFPCQPFSQAG 83 + DVL+ G PCQ FS G Sbjct: 93 FDATPYKNQVDVLVGGSPCQAFSMVG 118 >gi|304383753|ref|ZP_07366212.1| modification methylase HgiDII [Prevotella marshii DSM 16973] gi|304335277|gb|EFM01548.1| modification methylase HgiDII [Prevotella marshii DSM 16973] Length = 360 Score = 37.0 bits (84), Expect = 0.83, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ DLFCGIGG+ ++ + +I+ Y+ N I+ DI + Sbjct: 14 IEVIDLFCGIGGLSFGMKS----KGFNILAGYDIDATCRYAYETNNNAKFIYKDIKTVSP 69 Query: 62 QDIPDH------DVLLAGFPCQPFS 80 +I VL PCQPFS Sbjct: 70 DEIRTAYGKGSIRVLAGCAPCQPFS 94 >gi|144575557|gb|AAZ53977.2| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae 7448] Length = 339 Score = 37.0 bits (84), Expect = 0.83, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 19/92 (20%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIF--GDI--A 57 DLF G GG+ L S +I +V+TY NF N +F GDI + Sbjct: 19 DLFSGAGGLSCGLVMA----GFLPLASLKIMKQAVETYAYNFKKRSKNKELFKLGDIRDS 74 Query: 58 KIKTQDIPDH------DVLLAGFPCQPFSQAG 83 KIK++ DH D++ GFPCQ FS AG Sbjct: 75 KIKSE-FYDHFKDQELDLIAGGFPCQGFSMAG 105 >gi|254467362|ref|ZP_05080773.1| DNA-cytosine methyltransferase [Rhodobacterales bacterium Y4I] gi|206688270|gb|EDZ48752.1| DNA-cytosine methyltransferase [Rhodobacterales bacterium Y4I] Length = 319 Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK 58 ML +L G GG L LE F+H + EI+ + T + N P ++ D+ K Sbjct: 1 MLTSVELCAGAGGQALGLEAAGFDHTAL-----VEIDKHCCATLRHNRPAWNVLEEDVRK 55 Query: 59 IK--TQDIPDHDVLLAGFPCQPFSQAG 83 K D D+L G PC PFS AG Sbjct: 56 FKEVAGDYKGIDLLAGGLPCPPFSVAG 82 >gi|118431236|ref|NP_147563.2| DNA (cytosine-5-)-methyltransferase [Aeropyrum pernix K1] gi|116062559|dbj|BAA79854.2| DNA (cytosine-5-)-methyltransferase [Aeropyrum pernix K1] Length = 469 Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 21/92 (22%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----------------PNT 50 LF G GG+ L Q+ R V F++EI + TY N P T Sbjct: 9 LFSGAGGLDLGFVQSGRFRIV---FANEILLPAAVTYSRNLGLRLEVCGDEPRVEAQPGT 65 Query: 51 LIFGDIAKIKTQDIP--DHDVLLAGFPCQPFS 80 ++ D+AK+ + D DV++ G PCQ FS Sbjct: 66 IMACDVAKLDFTGLSGVDADVIIGGPPCQDFS 97 >gi|332029105|gb|EGI69118.1| tRNA (cytosine-5-)-methyltransferase [Acromyrmex echinatior] Length = 309 Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Query: 34 EINPYSVKTYQANFPNTLIFG-DIAKIKTQDIP--DHDVLLAGFPCQPFSQAG 83 +INP + Y NFP T++ +I I Q++ + D++ PCQPF++ G Sbjct: 15 DINPVANDVYHHNFPETVLMNRNIQSINAQELNKLNVDIMFMSPPCQPFTRLG 67 >gi|325857409|ref|ZP_08172464.1| DNA (cytosine-5-)-methyltransferase [Prevotella denticola CRIS 18C-A] gi|325483119|gb|EGC86099.1| DNA (cytosine-5-)-methyltransferase [Prevotella denticola CRIS 18C-A] Length = 320 Score = 37.0 bits (84), Expect = 0.87, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI--AKI 59 +K+ DLFCG GG+ L +Q + + + + Y+ NF + + D+ A Sbjct: 1 MKVVDLFCGCGGLSLGFQQA----GFDIIAAYDNWEAATDVYRLNFSHPVHKADLMNAAR 56 Query: 60 KTQDIPDH--DVLLAGFPCQPFSQAG 83 ++ I + ++++ G PCQ +S AG Sbjct: 57 ASESIMQYSPEMIIGGPPCQDYSSAG 82 >gi|255081819|ref|XP_002508128.1| DNA methyltransferase [Micromonas sp. RCC299] gi|226523404|gb|ACO69386.1| DNA methyltransferase [Micromonas sp. RCC299] Length = 404 Score = 37.0 bits (84), Expect = 0.87, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57 L+ + +CG+GG+ L + V F +INP Y+ NF I+G Sbjct: 31 LRAVEFYCGVGGLHYSLLRARPDAKVVAAF--DINPNGNDVYEHNFGVRPSQKNIYG--L 86 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + + D D + L PCQPF++ G Sbjct: 87 PVASFDRLDAGLWLLSPPCQPFTRQG 112 >gi|170719036|ref|YP_001784193.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] gi|168827165|gb|ACA32536.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] Length = 365 Score = 37.0 bits (84), Expect = 0.87, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIA----KIKTQDIPDHDVLLAGFPCQPFSQAG 83 +EI P+ +P GD+ KI ++I DVL+ G PCQ FS AG Sbjct: 28 AEIEPFPSALLAYRYPEIPNLGDMTALPEKILNREIKAPDVLVGGTPCQAFSVAG 82 >gi|242253856|ref|NP_001156357.1| tRNA (cytosine-5-)-methyltransferase [Sus scrofa] gi|226222432|gb|ACO38647.1| DNA methyltransferase 2 [Sus scrofa] Length = 408 Score = 37.0 bits (84), Expect = 0.87, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L++ +L+ GIGG+ L ++ V + ++N + + Y+ NFP+T + + Sbjct: 4 LRVLELYSGIGGMHQALRESCIPAQVVA--AIDVNTVANEVYKYNFPHTQLLAKTIEGVT 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D +++L PCQPF++ G Sbjct: 62 LEEFDRLSFNMVLMSPPCQPFTRIG 86 >gi|121594541|ref|YP_986437.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42] gi|120606621|gb|ABM42361.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42] Length = 366 Score = 37.0 bits (84), Expect = 0.87, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLFCG GG L F + +++P Y+AN + DI+K+ Sbjct: 23 ISCVDLFCGAGG----LTHGFVLEGLPVVAGIDLDPACRFPYEANNQARFVERDISKVTA 78 Query: 62 QDIP----DHDV-LLAG-FPCQPFS 80 ++ D D+ +LAG PCQPFS Sbjct: 79 SELKALFGDADLTILAGCAPCQPFS 103 >gi|298486609|ref|ZP_07004667.1| DNA methyltransferase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158824|gb|EFH99886.1| DNA methyltransferase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 589 Score = 37.0 bits (84), Expect = 0.88, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAK----IKTQDIPDHDVLLAGFPCQPFSQA 82 +E + +E+ P+ ++P T GD+ K + I DVL+ G PCQ FS A Sbjct: 31 MEPVWFAEVEPFPSAVLAHHYPRTPNLGDMTKLGALVLAGKIKAPDVLVGGTPCQAFSVA 90 Query: 83 G 83 G Sbjct: 91 G 91 >gi|167462714|ref|ZP_02327803.1| possible DNA (cytosine-5-)-methyltransferase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382689|ref|ZP_08056545.1| DNA-methyltransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153341|gb|EFX45773.1| DNA-methyltransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 260 Score = 37.0 bits (84), Expect = 0.88, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 15/92 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K LF GIGGI L + +E E + K + ++PNT I+ D+ + T Sbjct: 1 MKKLSLFSGIGGIDLAAKWA----GIETVAFCEKEHFPQKVLRRHWPNTPIYDDVCTL-T 55 Query: 62 QDIPDHDVLL----------AGFPCQPFSQAG 83 +++ + D ++ AG+PCQ S AG Sbjct: 56 REVLERDGIIGTGRTIDLISAGYPCQGESYAG 87 >gi|114629602|ref|XP_001151777.1| PREDICTED: DNA methyltransferase 2 isoform 3 [Pan troglodytes] gi|119606624|gb|EAW86218.1| hCG23994, isoform CRA_b [Homo sapiens] gi|167887560|gb|ACA05984.1| tRNA aspartic acid methyltransferase 1 variant 2 [Homo sapiens] Length = 367 Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust. Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L++ +L+ G+GG+ L ++ V + ++N + + Y+ NFP+T + + Sbjct: 4 LRVLELYSGVGGMHHALRESCIPAQVVA--AIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQ 81 ++ D D++L PCQPF++ Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTR 84 >gi|291544225|emb|CBL17334.1| DNA-methyltransferase (dcm) [Ruminococcus sp. 18P13] Length = 407 Score = 37.0 bits (84), Expect = 0.90, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 15/88 (17%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 +LF G GG+ L +E+ FN + E++ + T + N P +I DIA + D Sbjct: 78 ELFAGAGGLALGVEKAGFNTLGL-----VEVDKDASDTLRKNRPEWRVINDDIANVSCLD 132 Query: 64 IPDH--------DVLLAGFPCQPFSQAG 83 + ++ D+L G PCQ FS AG Sbjct: 133 LQEYFGLKQGELDLLSGGAPCQSFSYAG 160 >gi|119716511|ref|YP_923476.1| DNA-cytosine methyltransferase [Nocardioides sp. JS614] gi|119537172|gb|ABL81789.1| DNA-cytosine methyltransferase [Nocardioides sp. JS614] Length = 399 Score = 37.0 bits (84), Expect = 0.93, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 23/96 (23%) Query: 6 DLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANF----------------P 48 +LF G GG+ + L E F H +E+N + T +AN P Sbjct: 19 ELFSGGGGLAMALHEAGFRH-----LLLNELNKRACATLRANNAVDYLPDETPPATLADP 73 Query: 49 NTLIFGDIAKIK-TQDIPDHDVLLAGFPCQPFSQAG 83 LI G I ++ T + D DV+ G PCQPFS G Sbjct: 74 WPLIEGGIGEVDFTPFLGDVDVVAGGVPCQPFSLGG 109 >gi|113461565|ref|YP_719634.1| DNA-cytosine methyltransferase [Haemophilus somnus 129PT] gi|112823608|gb|ABI25697.1| DNA-cytosine methyltransferase [Haemophilus somnus 129PT] Length = 365 Score = 37.0 bits (84), Expect = 0.94, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIA----KIKTQDIPDHDVLLAGFPCQPFSQAG 83 +EI P+ +P GD+ KI ++I DVL+ G PCQ FS AG Sbjct: 28 AEIEPFPSALLAYRYPEIPNLGDMTALPEKILNREIKAPDVLVGGTPCQAFSVAG 82 >gi|332995746|gb|AEF05801.1| DNA-cytosine methyltransferase [Alteromonas sp. SN2] Length = 369 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Query: 28 ECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPDH-DVLLAGFPCQPFS 80 +C F+++ + V TY+ N+ N T++ DI ++ D+ D++ A FPCQ S Sbjct: 11 KCLFANDFDYKKVNTYKKNWGNETIVQSDIKTLQCSDLKGAADLVWASFPCQDLS 65 >gi|85709919|ref|ZP_01040984.1| site-specific DNA-methyltransferase [Erythrobacter sp. NAP1] gi|85688629|gb|EAQ28633.1| site-specific DNA-methyltransferase [Erythrobacter sp. NAP1] Length = 356 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 22/90 (24%) Query: 3 KITDLFCGIGGIRLDLEQT-FNHR-----NVECFFSSEINPYSVKTYQANFPNTLIFGDI 56 ++ DLFCG+G + L+Q F R + C F+ E N S T+ A D+ Sbjct: 13 EVVDLFCGVGALSHGLKQAGFAIRAGYDTDRRCKFAFETNNDS--TFHAR--------DV 62 Query: 57 AKIKTQDIPDH------DVLLAGFPCQPFS 80 +K+ +++ H VL PCQPFS Sbjct: 63 SKLTAKEVRAHFSGDKPSVLAGCAPCQPFS 92 >gi|331703222|ref|YP_004399909.1| cytosine specific DNA methyltransferase Sau96I [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801777|emb|CBW53930.1| Cytosine specific DNA methyltransferase Sau96I [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 342 Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 9/59 (15%) Query: 34 EINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPDH--------DVLLAGFPCQPFSQAG 83 E + +V+T + N PN +IF D+ K+ +D+ D+L G PCQ FS AG Sbjct: 33 EFDKQAVETLKFNRPNWNIIFEDVQKVSQRDLKKEFNLKERELDLLSGGAPCQSFSYAG 91 >gi|304383358|ref|ZP_07365824.1| site-specific DNA-methyltransferase [Prevotella marshii DSM 16973] gi|304335526|gb|EFM01790.1| site-specific DNA-methyltransferase [Prevotella marshii DSM 16973] Length = 478 Score = 37.0 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIG L +NV F EI+ + +PN++ + +I + Sbjct: 10 LFSGIGAPEL-AAFWLGWQNV---FHCEISEFCNTILNYWYPNSIGYENIKQADFSKWQG 65 Query: 67 H-DVLLAGFPCQPFSQAG 83 DVL GFPCQPFS AG Sbjct: 66 KIDVLTGGFPCQPFSSAG 83 >gi|228964036|ref|ZP_04125166.1| hypothetical protein bthur0004_8960 [Bacillus thuringiensis serovar sotto str. T04001] gi|228795688|gb|EEM43165.1| hypothetical protein bthur0004_8960 [Bacillus thuringiensis serovar sotto str. T04001] Length = 478 Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 7/88 (7%) Query: 3 KITDLFCGIGGIRLD-LEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIA--K 58 K+ DLF G GG L+ + + S +I+ + KT + ++ GDI + Sbjct: 5 KVLDLFAGGGGFSTGFLQAKYQENEFDISKSLDIDKEACKTLSNHLSEKRVVNGDITDNR 64 Query: 59 IKTQ---DIPDHDVLLAGFPCQPFSQAG 83 IK Q + D DV++ G PCQ FS AG Sbjct: 65 IKEQIFLECEDVDVIIGGPPCQTFSLAG 92 >gi|167046802|ref|YP_001661472.1| DNA methyltransferase [Acinetobacter venetianus] gi|83833711|gb|ABC47668.1| DNA methyltransferase [Acinetobacter venetianus] Length = 737 Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI- 59 L LF G GG+ + ++ ++ C +S+I + TY N+P+ F DI +I Sbjct: 8 LNFISLFTGAGGLDIGFKEAGHN----CLLASDIMKEAELTYSYNYPSVPFFREDIRQIP 63 Query: 60 -----KTQDIPDHDVLLAGFPCQPFSQAG 83 K + DV++ G PCQ FS G Sbjct: 64 LDKFKKVIGDKEVDVIIGGPPCQGFSNMG 92 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 18/93 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY----------QANFPNTL 51 L+ DLF G+GG L+ ++C ++ + Y+V+ Y +A+ + Sbjct: 371 LRFADLFSGVGGFTEGLKSA----GLDCILGADFDRYAVEAYRKNHTDHECLEADLSDEE 426 Query: 52 IFGDIA-KIKTQDIPDHDVLLAGFPCQPFSQAG 83 I +IA ++K Q + D+++ G PCQ FS G Sbjct: 427 IQHNIAMRLKEQKV---DLVVGGPPCQGFSIFG 456 >gi|32441269|ref|NP_861528.1| tRNA (cytosine-5-)-methyltransferase [Bos taurus] gi|75046080|sp|Q7YS61|TRDMT_BOVIN RecName: Full=tRNA (cytosine-5-)-methyltransferase; AltName: Full=DNA (cytosine-5)-methyltransferase-like protein 2; Short=Dnmt2 gi|31074159|gb|AAP20550.1| DNA cytosine-5 methyltransferase 2 [Bos taurus] gi|296481442|gb|DAA23557.1| tRNA (cytosine-5-)-methyltransferase [Bos taurus] Length = 391 Score = 37.0 bits (84), Expect = 0.98, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L+ +L+ GIGG+ L ++ V + ++N + + Y+ NFP+T + + Sbjct: 4 LRALELYSGIGGMHQALRESCIPAQVVA--AVDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D +++L PCQPF++ G Sbjct: 62 LEEFDRLSFNMILMSPPCQPFTRIG 86 >gi|317179558|dbj|BAJ57346.1| cytosine specific DNA methyltransferase [Helicobacter pylori F30] Length = 355 Score = 37.0 bits (84), Expect = 0.99, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 KI DLFCG GG LE + + + + ++ T++ N N T + GDI +I+ Sbjct: 4 KILDLFCGAGGFSAGLECL---KEFDALIGLDCDKQALITFENNHKNATGVCGDITQIEI 60 Query: 62 QD-------IPDHDVLLAGFPCQPFSQAG 83 ++ + ++++ G PCQ FS G Sbjct: 61 KEKVIKLAQTLEINMIIGGPPCQGFSNKG 89 >gi|261837515|gb|ACX97281.1| cytosine-methyltransferase [Helicobacter pylori 51] Length = 355 Score = 37.0 bits (84), Expect = 1.00, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 KI DLFCG GG LE + + + + ++ T++ N N T + GDI +I+ Sbjct: 4 KILDLFCGAGGFSAGLECL---KEFDALIGLDCDKQALITFENNHKNATGVCGDITQIEI 60 Query: 62 QD-------IPDHDVLLAGFPCQPFSQAG 83 ++ + ++++ G PCQ FS G Sbjct: 61 KEKVIKLAQTLEINMIIGGPPCQGFSNKG 89 >gi|182436696|ref|YP_001824415.1| hypothetical protein SGR_2903 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465212|dbj|BAG19732.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 359 Score = 37.0 bits (84), Expect = 1.00, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKI---KTQDIPDHDVLLAGFPCQPFSQAG 83 +E +PY+ + A+ P GDI + + +D+ +++ AGFPC+ S AG Sbjct: 43 AENDPYAAAVFAAHHPGVPNLGDITRADWERVRDLYRPEIVGAGFPCRNISNAG 96 >gi|114330146|ref|YP_746368.1| DNA-cytosine methyltransferase [Nitrosomonas eutropha C91] gi|114307160|gb|ABI58403.1| DNA-cytosine methyltransferase [Nitrosomonas eutropha C91] Length = 497 Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKTQD----IPDHDVLLAGFPCQPFSQAG 83 SEI P+ +P+ GD+ +I Q + D+L+ G PCQ FS AG Sbjct: 37 SEIEPFPCAVLAHRYPDVPNLGDMTQIAEQVRAGLVVAPDILVGGTPCQTFSIAG 91 >gi|254416651|ref|ZP_05030402.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196176617|gb|EDX71630.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 428 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 27/101 (26%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIA------- 57 DLF G+GG L +EQ + + E +P Y+ NFP T + D+ Sbjct: 12 DLFAGVGGFSLGIEQA----GFDVAIAVEKDPIHAAVYKFNFPQTHVLCADVTELTGTHI 67 Query: 58 ---------------KIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ +D D +++ G PCQ FS G Sbjct: 68 QKALRNWCDRQKRPVRVSDRDRMDINLVFGGPPCQGFSVMG 108 >gi|315222611|ref|ZP_07864500.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211] gi|315188297|gb|EFU22023.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211] Length = 317 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 13/87 (14%) Query: 2 LKITDLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 L + +LF GIG I+ L Q H+ ++ EI+ VK+Y A + NT D Sbjct: 6 LNVLELFGGIGAIKKALIRQKIPHKTLDYV---EIDKNCVKSYNALY-NT----DFKPKS 57 Query: 61 TQDI--PDH--DVLLAGFPCQPFSQAG 83 D PD D+L+ G PCQ FS++G Sbjct: 58 ILDFHPPDKRIDLLMHGSPCQDFSRSG 84 >gi|127429|sp|P06530|MTBR_BACSU RecName: Full=Modification methylase BsuRI; Short=M.BsuRI; AltName: Full=Cytosine-specific methyltransferase BsuRI gi|40247|emb|CAA26731.1| unnamed protein product [Bacillus subtilis] Length = 436 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 28/108 (25%) Query: 2 LKITDLFCGIGGIRLDLE--------------------QTFNH-RNVECF---FSSEINP 37 + + LF G GG+ L E FN RN F +++++ Sbjct: 59 INVLSLFSGCGGLDLGFELAGLAAVIGEQAAMEAFKDKDRFNELRNKSIFHTIYTNDLFK 118 Query: 38 YSVKTYQANFPNTLI--FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + +TY+ NFP +I DI ++K P +++L GFPC FS+AG Sbjct: 119 EANQTYKTNFPGHVIQHEKDIRQVKY--FPKCNLILGGFPCPGFSEAG 164 >gi|322691196|ref|YP_004220766.1| phage protein [Bifidobacterium longum subsp. longum JCM 1217] gi|320456052|dbj|BAJ66674.1| hypothetical phage protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 509 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K LF G G+ + + + + + E P ++ ++ A P GDI KI + Sbjct: 7 KTISLFSGYLGLDIGVSKAIGEGELVGWSDIEPGPLALGSHHA--PKARRLGDITKIDWE 64 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 D +V+ GF CQ S AG Sbjct: 65 KYKDIEVMAGGFCCQSLSLAG 85 >gi|228918462|ref|ZP_04081908.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228949261|ref|ZP_04111525.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810387|gb|EEM56744.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228841185|gb|EEM86381.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 413 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 12/91 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-----SVKTYQANFPNTLIF-- 53 M+ + +LF G+GG R+ LE+ + + V + ++ P + Y F + I Sbjct: 1 MINVIELFAGVGGFRIGLEKIGHFQIV---WGNQWEPSKKAQDAFHCYAQRFQDKGIHCN 57 Query: 54 GDIAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 DIA + ++I + ++++ GFPCQ +S A Sbjct: 58 QDIATVTDEEIQKIEAEMIVGGFPCQDYSVA 88 >gi|302187943|ref|ZP_07264616.1| C-5 cytosine-specific DNA methylase family protein [Pseudomonas syringae pv. syringae 642] Length = 307 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDI 64 DLF G+GG + V+ +++ P +V+ + AN P+ + + D+ + + Sbjct: 6 DLFAGLGGWSSGARRA----GVKVLWAANHWPVAVEWHSANHPDAIHVCQDLHQADWSTV 61 Query: 65 PDHDVLLAGFPCQPFSQA 82 P HD++LA CQ S+A Sbjct: 62 PAHDIMLASPCCQGHSKA 79 >gi|257421714|ref|ZP_05598704.1| predicted protein [Enterococcus faecalis X98] gi|257163538|gb|EEU93498.1| predicted protein [Enterococcus faecalis X98] Length = 286 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDH 67 F G GG+ L + Q + S EI+ T + NF + + DI+KI D D Sbjct: 9 FSGAGGMDLGMLQA----GINVVESFEIDKKCCATLRKNFNHKVNECDISKITVLDQQDA 64 Query: 68 DVLLAGFPCQPFS 80 DV + FPC +S Sbjct: 65 DVYIGTFPCTKYS 77 >gi|78221478|ref|YP_383225.1| C-5 cytosine-specific DNA methylase [Geobacter metallireducens GS-15] gi|78192733|gb|ABB30500.1| C-5 cytosine-specific DNA methylase [Geobacter metallireducens GS-15] Length = 331 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 15/89 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ +LFCGIGG +E NV + + +P ++ TY+ NFP K+ Sbjct: 27 LRTLELFCGIGGFSAAVEGG----NVRIVGAFDQDPAALDTYRLNFPGH----GARKVDL 78 Query: 62 QDIPDHDVLLAGF-------PCQPFSQAG 83 + + ++ G PCQP+ + G Sbjct: 79 ERVSAWELTAGGVDLWWLSPPCQPYCERG 107 >gi|61554791|gb|AAX46615.1| DNA methyltransferase 2 isoform a [Bos taurus] Length = 377 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L+ +L+ GIGG+ L ++ V + ++N + + Y+ NFP+T + + Sbjct: 4 LRALELYSGIGGMHQALRESCIPAQVVA--AVDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D +++L PCQPF++ G Sbjct: 62 LEEFDRLSFNMILMSPPCQPFTRIG 86 >gi|155122046|gb|ABT13914.1| hypothetical protein MT325_m360R [Paramecium bursaria chlorella virus MT325] Length = 342 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 6/84 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML DLF GIGGI L VE E N + PN +F D+ Sbjct: 1 MLHAIDLFSGIGGITHGLRGI-----VEPIAYVEKNDDARGFLARKHPNVPVFDDVCTFD 55 Query: 61 -TQDIPDHDVLLAGFPCQPFSQAG 83 T + D++ G+PC FS AG Sbjct: 56 ATPYLGKVDIITGGWPCTGFSTAG 79 >gi|268607976|ref|ZP_06141707.1| cytosine-specific DNA-methyltransferase Sau96I [Ruminococcus flavefaciens FD-1] Length = 407 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 15/88 (17%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 +LF G GG+ L +E+ FN + E++ + T + N P +I DIA + D Sbjct: 78 ELFAGAGGLALGVEKAGFNTLGL-----VEVDKDASDTLRRNRPEWRVINDDIANVSCLD 132 Query: 64 IPDH--------DVLLAGFPCQPFSQAG 83 + ++ D+L G PCQ FS AG Sbjct: 133 LQEYFGLKQGELDLLSGGAPCQSFSYAG 160 >gi|167747653|ref|ZP_02419780.1| hypothetical protein ANACAC_02374 [Anaerostipes caccae DSM 14662] gi|239625035|ref|ZP_04668066.1| modification methylase Rho11sI [Clostridiales bacterium 1_7_47_FAA] gi|167653015|gb|EDR97144.1| hypothetical protein ANACAC_02374 [Anaerostipes caccae DSM 14662] gi|239521421|gb|EEQ61287.1| modification methylase Rho11sI [Clostridiales bacterium 1_7_47FAA] Length = 504 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Query: 34 EINPYSVKTYQA--NFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 E + Y+VK+Y A + GDI K+ + +P + + G PCQ FS +G Sbjct: 10 EFDKYAVKSYCAIHGVDESANLGDITKVDEKKLPYFNFICGGSPCQDFSLSG 61 >gi|33338827|gb|AAQ14149.1| Dmt, incomplete [Enterobacteria phage P1] Length = 638 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQAG 83 +EI P+ +P+ GD+ K+ + +I DVL+ G PCQ FS AG Sbjct: 31 AEIEPFPSAVLAHRWPHVANLGDMTKLAKKVLAGEIESPDVLVWGTPCQAFSIAG 85 >gi|46401691|ref|YP_006537.1| Dmt [Enterobacteria phage P1] gi|33338718|gb|AAQ14041.1| Dmt [Enterobacteria phage P1] Length = 754 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQAG 83 +EI P+ +P+ GD+ K+ + +I DVL+ G PCQ FS AG Sbjct: 31 AEIEPFPSAVLAHRWPHVANLGDMTKLAKKVLAGEIESPDVLVWGTPCQAFSIAG 85 >gi|155370467|ref|YP_001426001.1| hypothetical protein FR483_N369L [Paramecium bursaria Chlorella virus FR483] gi|155123787|gb|ABT15654.1| hypothetical protein FR483_N369L [Paramecium bursaria Chlorella virus FR483] Length = 342 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 6/84 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML DLF GIGGI L VE E N + PN +F D+ Sbjct: 1 MLHAIDLFSGIGGITHGLRGI-----VEPVAYVEKNDDARGFLAQKHPNVPVFDDVCTFD 55 Query: 61 -TQDIPDHDVLLAGFPCQPFSQAG 83 T + D++ G+PC FS AG Sbjct: 56 ATPYLGKVDIITGGWPCTGFSTAG 79 >gi|167621147|ref|ZP_02389778.1| site-specific DNA-methyltransferase [Burkholderia thailandensis Bt4] Length = 355 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 10/81 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI- 64 DLFCG+GG+ L + ++ +I+ ++AN + D+ K+K ++I Sbjct: 18 DLFCGVGGLTHGLVRG----GIQVSAGIDIDTSCKFPFEANNSAVFLERDVGKLKAEEIA 73 Query: 65 PDHD----VLLAG-FPCQPFS 80 P ++ LLAG PCQPFS Sbjct: 74 PFYEGADITLLAGCAPCQPFS 94 >gi|167560986|ref|ZP_02353902.1| site-specific DNA-methyltransferase [Burkholderia oklahomensis EO147] Length = 355 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 10/81 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI- 64 DLFCG+GG+ L + ++ +I+ ++AN + D+ K+K ++I Sbjct: 18 DLFCGVGGLTHGLVRG----GIQVSAGIDIDTSCKFPFEANNSAVFLERDVGKLKAEEIA 73 Query: 65 PDHD----VLLAG-FPCQPFS 80 P ++ LLAG PCQPFS Sbjct: 74 PFYEGADITLLAGCAPCQPFS 94 >gi|282880843|ref|ZP_06289537.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS 5C-B1] gi|281305284|gb|EFA97350.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS 5C-B1] Length = 374 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 29/106 (27%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----- 55 + + D+F G+GG+ + E+ FN ++EI+ ++Y+ N +T++ + Sbjct: 1 MNVVDIFSGVGGLSVGFEKAGFN-----VVLANEIDEQIAQSYKRNHTHTIMVNEDIRSF 55 Query: 56 -------IAKIKT-----------QDIPDHDVLLAGFPCQPFSQAG 83 I+K Q++ D +V++ G PCQ FS AG Sbjct: 56 VDHFDDSISKATERLNSNCKEKLYQELNDINVVIGGPPCQGFSMAG 101 >gi|18202059|sp|O52702|MTA1_ACEPA RecName: Full=Modification methylase ApaLI; Short=M.ApaLI; AltName: Full=Cytosine-specific methyltransferase ApaLI gi|2865599|gb|AAC97180.1| ApaLI methyltransferase [Acetobacter pasteurianus] Length = 429 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 18/90 (20%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF G GG F+ ++ F +EIN + +TYQ N + D++ + Sbjct: 7 VVSLFAGAGG----FSSGFSQAGLKPLFGAEINADACQTYQENVGSPCHQLDLSTVD--- 59 Query: 64 IPDHD----------VLLAGFPCQPFSQAG 83 P H V++ G PCQ FS AG Sbjct: 60 -PSHIEMLTGGKRPFVVIGGPPCQGFSTAG 88 >gi|1644234|dbj|BAA11339.1| ApaLI methylase [Acetobacter pasteurianus] Length = 429 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 18/90 (20%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF G GG F+ ++ F +EIN + +TYQ N + D++ + Sbjct: 7 VVSLFAGAGG----FSSGFSQAGLKPLFGAEINADACQTYQENVGSPCHQLDLSTVD--- 59 Query: 64 IPDHD----------VLLAGFPCQPFSQAG 83 P H V++ G PCQ FS AG Sbjct: 60 -PSHIEMLTGGKRPFVVIGGPPCQGFSTAG 88 >gi|113477918|ref|YP_723979.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] gi|110168966|gb|ABG53506.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] Length = 337 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 4 ITDLFCGIGGIRLDLE-QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + D+F G GG+ L E Q F E +N TY N IA Sbjct: 21 VIDIFAGCGGLSLGFEAQGFTTHGFE------MNADCCATYNKNLKGNCT--QIALTSET 72 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +P V++ G PCQPFS G Sbjct: 73 KLPPGKVIIGGPPCQPFSVGG 93 >gi|326775654|ref|ZP_08234919.1| C-5 cytosine-specific DNA methylase [Streptomyces cf. griseus XylebKG-1] gi|326655987|gb|EGE40833.1| C-5 cytosine-specific DNA methylase [Streptomyces cf. griseus XylebKG-1] Length = 324 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKTQDI----PDHDVLLAGFPCQPFSQAG 83 +E +P++ + P G I +I D+ PD D L+AG+PCQ S G Sbjct: 35 AEKDPWAAQVMAGLLPGVENLGSIDEINYADVAATYPDLDTLIAGWPCQGISNNG 89 >gi|210621902|ref|ZP_03292899.1| hypothetical protein CLOHIR_00844 [Clostridium hiranonis DSM 13275] gi|210154533|gb|EEA85539.1| hypothetical protein CLOHIR_00844 [Clostridium hiranonis DSM 13275] Length = 438 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 28/102 (27%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--------------------- 44 DLFCG GG L Q H FSS+I+ TY+ Sbjct: 6 DLFCGAGGCSEGLIQAGFH----ILFSSDISEMVEVTYKNRHEQLGLIQGKNTWFERSDI 61 Query: 45 ANFPNTLIFGDIAKI---KTQDIPDHDVLLAGFPCQPFSQAG 83 + IF I + K Q IP+ D+L+ G CQ FS+AG Sbjct: 62 RDLTGETIFKCIESLDIFKNQKIPEIDLLIGGPSCQGFSRAG 103 >gi|228989002|ref|ZP_04149032.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228770724|gb|EEM19259.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 445 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 12/84 (14%) Query: 4 ITDLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKT 61 + +F G GG+ + E FN + + E++P + TY+ N P T ++ DI +K Sbjct: 15 VIGIFAGCGGLDMGFFECDFNVQ-----LAIELDPDACNTYKKNHPETEVWNRDIKTVKG 69 Query: 62 QDIPDHD-----VLLAGFPCQPFS 80 +I +LL G PCQ FS Sbjct: 70 DEIRKQVGNKPLILLGGSPCQSFS 93 >gi|217032842|ref|ZP_03438321.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128] gi|298737011|ref|YP_003729541.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] gi|216945425|gb|EEC24089.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128] gi|298356205|emb|CBI67077.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] Length = 361 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAK--- 58 KI DLFCG GG LE+ + + + ++ T++ N N + + GDI + Sbjct: 4 KILDLFCGAGGFSAGLERL---EEFDALIGLDCDKQALITFENNHKNAIGVCGDITQAAI 60 Query: 59 ----IKTQDIPDHDVLLAGFPCQPFSQAG 83 IK ++++ G PCQ FS G Sbjct: 61 KEKVIKLAQTLGINMIIGGPPCQGFSNKG 89 >gi|315604954|ref|ZP_07880010.1| modification methylase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313349|gb|EFU61410.1| modification methylase [Actinomyces sp. oral taxon 180 str. F0310] Length = 322 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 18/91 (19%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 L ++ G GG L LEQ F+H V EI+ ++ T + N P +I GD+ Sbjct: 3 LTSIEICAGAGGQALGLEQAGFDHLAV-----VEIDHHACNTLRENRPQWNVIEGDVVPW 57 Query: 60 KTQDIPDH-------DVLLAGFPCQPFSQAG 83 I DH D++ G PC PFS AG Sbjct: 58 ----IRDHAHEYRGVDLVAGGVPCPPFSYAG 84 >gi|240143270|ref|ZP_04741871.1| modification methylase BspRI [Roseburia intestinalis L1-82] gi|257204748|gb|EEV03033.1| modification methylase BspRI [Roseburia intestinalis L1-82] Length = 432 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-KTQDIPDHDVLLAGFPC 76 ++ N+ + ++I + +TY N I+ D + I K ++ P D++L GFPC Sbjct: 98 FDENINNNVFNTIYVNDIFDEARETYAQN-AGKYIYMDKSDIRKIKEFPKADIVLGGFPC 156 Query: 77 QPFSQAG 83 FS+AG Sbjct: 157 PGFSEAG 163 >gi|157112484|ref|XP_001657555.1| DNA (cytosine-5)-methyltransferase [Aedes aegypti] gi|108878059|gb|EAT42284.1| DNA (cytosine-5)-methyltransferase [Aedes aegypti] Length = 344 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKT 61 ++ +LF GIGG+ +E++ + + + +INP + Y NF N +I + Sbjct: 16 QVLELFSGIGGMHFAIERS--GKRYKVVSAIDINPVANAIYNHNFGANKASNSNILSLTP 73 Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83 I +V+L PCQPFS+ G Sbjct: 74 DRIQKLGVNVILMSPPCQPFSRNG 97 >gi|29566171|ref|NP_817742.1| gp65 [Mycobacterium phage Che9c] gi|29424896|gb|AAN12623.1| gp65 [Mycobacterium phage Che9c] Length = 513 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 ML +TDLFCG GG VE +S +V+T+ N P+ + D+++I Sbjct: 1 MLTLTDLFCGAGG---SSTGAIEIPGVEVRVASNHWDLAVETHNTNHPDADHVCADLSQI 57 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 + P D+L A C S A Sbjct: 58 DPRRFPRTDILWASPECTNHSVA 80 >gi|330998524|ref|ZP_08322345.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] gi|329568255|gb|EGG50071.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] Length = 379 Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 M+ ++F G GG+ +E + F E N + KT + N+ ++F DI Sbjct: 1 MINSLEIFSGAGGLAKGIEMAGARH--QAFV--EWNGDACKTLRWNYSPDIVFETDIRDF 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + + DV+ G PCQPFS G Sbjct: 57 QFSQFSNIDVIAGGPPCQPFSLGG 80 >gi|301321505|gb|ADK68895.1| Site-specific DNA methylase [Gordonia sp. KTR9] Length = 331 Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L +TD+F G GG + Q V ++ P +V T+Q N P+T I +++++ Sbjct: 18 LTMTDIFSGAGGSSEGMTQA----GVSVQVAANHWPVAVATHQVNHPDTEHILANLSEVD 73 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + P D+L A C +++G Sbjct: 74 WRSFPSTDILWASPSCVWHARSG 96 >gi|328947445|ref|YP_004364782.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447769|gb|AEB13485.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 445 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 33 SEINPYSVKTYQANFPNTLIFGDI----AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 SEI + + +PN GD+ KI T +I D++ G PCQ FS AG Sbjct: 31 SEIAEFQSNFLRIKYPNIKNLGDMNLIGKKIATAEIDSPDLICGGTPCQAFSLAG 85 >gi|205374924|ref|ZP_03227716.1| DNA-cytosine methyltransferase [Bacillus coahuilensis m4-4] Length = 323 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ DLF G GG+ L F + E + E ++ Y+ NF + + D++ +K Sbjct: 1 MRVIDLFSGCGGMSL----GFQNAGFEIVSAFENWDEAIDIYRKNFQHPICKYDLSDVKD 56 Query: 62 QD---IPDHDVLLAGFPCQPFSQAG 83 + + D+++ G PCQ +S AG Sbjct: 57 YNDFSKLNPDIIIGGPPCQDYSSAG 81 >gi|301766512|ref|XP_002918675.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Ailuropoda melanoleuca] Length = 391 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L+ +L+ GIGG+ L ++ +V + ++N + + Y+ NFP+T + + Sbjct: 4 LRALELYSGIGGMHQALRESCVPAHVVA--AIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D + +L PCQPF++ G Sbjct: 62 LEEFDKLSFNTILMSPPCQPFTRIG 86 >gi|226349837|ref|YP_002776950.1| modification methylase [Rhodococcus opacus B4] gi|226245752|dbj|BAH47019.1| modification methylase [Rhodococcus opacus B4] Length = 428 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 10/86 (11%) Query: 3 KITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++ ++ G GG L LE+ F+H+ + E++ + T + N P+ + GD+A Sbjct: 15 QVVEICAGAGGQALGLEKAGFSHK-----LAVELDTNACATLKLNRPDWDVEEGDVADPT 69 Query: 61 TQDIPDH---DVLLAGFPCQPFSQAG 83 +H D+L G PC PFS AG Sbjct: 70 VWKPSEHEGVDLLAGGVPCPPFSIAG 95 >gi|291566149|dbj|BAI88421.1| type II DNA modification methyltransferase [Arthrospira platensis NIES-39] Length = 379 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKTQD 63 +LF G GG+ LE H+ + EI+ + T N+ P + + DI + + Sbjct: 5 ELFAGAGGLAKGLEMAGIEHKAL-----VEIDHNACLTLAGNYKPELIYYVDIRSLNFAE 59 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D++ G PCQPFS G Sbjct: 60 FGHIDLISGGPPCQPFSMGG 79 >gi|284052085|ref|ZP_06382295.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] Length = 382 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKTQD 63 +LF G GG+ LE H+ + EI+ + T N+ P + + DI + + Sbjct: 8 ELFAGAGGLAKGLEMAGIEHKAL-----VEIDHNACLTLAGNYKPELIYYVDIRSLNFAE 62 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D++ G PCQPFS G Sbjct: 63 FGHIDLISGGPPCQPFSMGG 82 >gi|238922582|ref|YP_002936095.1| cytosine-specific methyltransferase [Eubacterium rectale ATCC 33656] gi|238874254|gb|ACR73961.1| cytosine-specific methyltransferase [Eubacterium rectale ATCC 33656] Length = 443 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 15/92 (16%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------NTLIFGDI 56 KI DLF G GG+ L E+ + E+ P + KT N T I GDI Sbjct: 4 KIIDLFSGCGGLALGFEKA----GFDIVAGIELMPEACKTISYNLSWRYGKKETHICGDI 59 Query: 57 AKIKTQDIPDH-----DVLLAGFPCQPFSQAG 83 +I+ + +++ G PCQ +S AG Sbjct: 60 TEIEASVFKNSFGDEGCIVIGGPPCQAYSMAG 91 >gi|111656823|ref|ZP_01407675.1| hypothetical protein SpneT_02001911 [Streptococcus pneumoniae TIGR4] gi|148994722|ref|ZP_01823806.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae SP9-BS68] gi|148999034|ref|ZP_01826467.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae SP11-BS70] gi|307067986|ref|YP_003876952.1| site-specific DNA methylase [Streptococcus pneumoniae AP200] gi|147755157|gb|EDK62211.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae SP11-BS70] gi|147927053|gb|EDK78094.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae SP9-BS68] gi|306409523|gb|ADM84950.1| Site-specific DNA methylase [Streptococcus pneumoniae AP200] gi|332074668|gb|EGI85142.1| modification methylase HpaII [Streptococcus pneumoniae GA17545] gi|332200781|gb|EGJ14853.1| modification methylase HpaII [Streptococcus pneumoniae GA41317] gi|332201799|gb|EGJ15869.1| modification methylase HpaII [Streptococcus pneumoniae GA47368] Length = 392 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 12/65 (18%) Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDH---------DVLLAGFPCQP 78 EC EI+ ++ K+Y++ F G+I +D+ D DV+ GFPCQ Sbjct: 9 ECLGFCEIDKFARKSYKSIFQTE---GEIEFHDIRDVSDDEFKKLRGKVDVICGGFPCQA 65 Query: 79 FSQAG 83 FS AG Sbjct: 66 FSIAG 70 >gi|78189586|ref|YP_379924.1| C-5 cytosine-specific DNA methylase [Chlorobium chlorochromatii CaD3] gi|78171785|gb|ABB28881.1| C-5 cytosine-specific DNA methylase [Chlorobium chlorochromatii CaD3] Length = 359 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 10/81 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI- 64 DLFCGIGG+ L+++ ++ +I+ +++ N I DI K++ +++ Sbjct: 11 DLFCGIGGLTYGLKKS----GIQVKAGIDIDESCRYSFEENCGTKFINKDIQKLQKEELN 66 Query: 65 -----PDHDVLLAGFPCQPFS 80 + +L+ PCQPFS Sbjct: 67 SIYGNAEIKILVGCAPCQPFS 87 >gi|307941961|ref|ZP_07657314.1| modification methylase NgoPII [Roseibium sp. TrichSKD4] gi|307774867|gb|EFO34075.1| modification methylase NgoPII [Roseibium sp. TrichSKD4] Length = 390 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K LF G GG+ L E + + + + Y+V +Y N D+ ++ + Sbjct: 1 MKAISLFSGCGGMDLGFENA----GISILAAYDSDSYAVSSYNRNVKLCARRIDVNRLDS 56 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 IP + D+L+A PCQ FS AG Sbjct: 57 --IPSNFDILIATPPCQGFSTAG 77 >gi|317051620|ref|YP_004112736.1| DNA-cytosine methyltransferase [Desulfurispirillum indicum S5] gi|316946704|gb|ADU66180.1| DNA-cytosine methyltransferase [Desulfurispirillum indicum S5] Length = 306 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDI 64 DLF G+GG + +++ P +VK + N P+T D+ + + + Sbjct: 5 DLFAGLGGWSTGARMA----GIHILWAANHWPEAVKWHAKNHPDTAHACQDLHQANWEQV 60 Query: 65 PDHDVLLAGFPCQPFSQA 82 P HD+LLA CQ S+A Sbjct: 61 PSHDILLASPCCQGHSRA 78 >gi|317057160|ref|YP_004105627.1| XRE family transcriptional regulator [Ruminococcus albus 7] gi|315449429|gb|ADU22993.1| transcriptional regulator, XRE family [Ruminococcus albus 7] Length = 407 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 13/87 (14%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 +LF G GG+ L +E+ E++ + T + N P +I DIA I D+ Sbjct: 78 ELFAGAGGLALGVEKA----GFITLGLVEVDKDASDTLRRNRPEWRVINDDIANISCLDL 133 Query: 65 PDH--------DVLLAGFPCQPFSQAG 83 D+ D+L G PCQ FS AG Sbjct: 134 QDYFGLKKGELDLLSGGAPCQSFSYAG 160 >gi|282859820|ref|ZP_06268914.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010] gi|282587440|gb|EFB92651.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010] Length = 356 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 23/91 (25%) Query: 2 LKITDLFCGIGGIR-------LDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 +K+ DLFCGIGG+ D+ +++ + C F+ E+N ++ Sbjct: 6 IKVVDLFCGIGGLSNGFFQEGFDVVAGYDN-DKSCKFAYEVNNHA----------KFHLA 54 Query: 55 DIAKIKTQDIPDH-----DVLLAGFPCQPFS 80 DI K+ ++I +L+ PCQPFS Sbjct: 55 DITKVTGKEINQQFGDSLKILVGCAPCQPFS 85 >gi|242316067|ref|ZP_04815083.1| modification methylase HgiDII [Burkholderia pseudomallei 1106b] gi|242139306|gb|EES25708.1| modification methylase HgiDII [Burkholderia pseudomallei 1106b] Length = 349 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLFCG GG L F ++ +++P Y+AN + D++ + T Sbjct: 9 ISCVDLFCGAGG----LTHGFVLEDLPVVAGIDLDPACRYPYEANNRAKFVERDVSTVTT 64 Query: 62 QDIP----DHDV-LLAG-FPCQPFS 80 +++ D ++ +LAG PCQPFS Sbjct: 65 EELETLFGDAELTILAGCAPCQPFS 89 >gi|126453573|ref|YP_001067912.1| modification methylase HgiDII [Burkholderia pseudomallei 1106a] gi|126227215|gb|ABN90755.1| modification methylase HgiDII [Burkholderia pseudomallei 1106a] Length = 344 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLFCG GG L F ++ +++P Y+AN + D++ + T Sbjct: 4 ISCVDLFCGAGG----LTHGFVLEDLPVVAGIDLDPACRYPYEANNRAKFVERDVSTVTT 59 Query: 62 QDIP----DHDV-LLAG-FPCQPFS 80 +++ D ++ +LAG PCQPFS Sbjct: 60 EELETLFGDAELTILAGCAPCQPFS 84 >gi|325270514|ref|ZP_08137114.1| modification methylase HindV [Prevotella multiformis DSM 16608] gi|324987090|gb|EGC19073.1| modification methylase HindV [Prevotella multiformis DSM 16608] Length = 320 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI--AKI 59 +K DLFCG GG+ L +Q + V + + + + Y+ NF + + D+ A Sbjct: 1 MKAVDLFCGCGGLSLGFQQA-GYNVVAAYDNWDA---ATDVYRLNFSHPVHKADLMDAGK 56 Query: 60 KTQDIPDH--DVLLAGFPCQPFSQAG 83 ++ I + ++++ G PCQ +S AG Sbjct: 57 ASESIARYAPEIIIGGPPCQDYSSAG 82 >gi|229825108|ref|ZP_04451177.1| hypothetical protein GCWU000182_00458 [Abiotrophia defectiva ATCC 49176] gi|331003746|ref|ZP_08327240.1| hypothetical protein HMPREF0491_02102 [Lachnospiraceae oral taxon 107 str. F0167] gi|229790480|gb|EEP26594.1| hypothetical protein GCWU000182_00458 [Abiotrophia defectiva ATCC 49176] gi|330412129|gb|EGG91524.1| hypothetical protein HMPREF0491_02102 [Lachnospiraceae oral taxon 107 str. F0167] Length = 305 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 12/91 (13%) Query: 1 MLKIT--DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 M K+T LF GIGGI L E +C E + + ++P F DI Sbjct: 1 MKKLTHFSLFTGIGGIDLAAEAAGFSTICQC----EWADFPTAVLKKHWPKVPRFQDITT 56 Query: 59 IKTQDIPDHD------VLLAGFPCQPFSQAG 83 + + + ++ GFPCQPFS G Sbjct: 57 VTKEAFIEKTGQESVTLISGGFPCQPFSAIG 87 >gi|197105892|ref|YP_002131269.1| DNA (cytosine-5-)-methyltransferase protein [Phenylobacterium zucineum HLK1] gi|196479312|gb|ACG78840.1| DNA (cytosine-5-)-methyltransferase protein [Phenylobacterium zucineum HLK1] Length = 508 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 18/95 (18%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFG---DIAK 58 ++ DLF G GG+ L F+ + + + E +P + ++ ANF P G DI + Sbjct: 34 RVLDLFSGCGGLSLG----FHAQGFDIVAAVEFDPAAAASHGANFHPEDPRHGRPRDITR 89 Query: 59 IKTQDIPDH----------DVLLAGFPCQPFSQAG 83 + + + DVL+ G PCQ F++ G Sbjct: 90 LTPEQLALELDLGPVEQAVDVLVGGPPCQAFARVG 124 >gi|210630626|ref|ZP_03296529.1| hypothetical protein COLSTE_00414 [Collinsella stercoris DSM 13279] gi|210160401|gb|EEA91372.1| hypothetical protein COLSTE_00414 [Collinsella stercoris DSM 13279] Length = 402 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 19/91 (20%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI--------- 56 DLF G GG+ L F + S++I P +KT+ AN I GDI Sbjct: 142 DLFAGAGGLALG----FVWAGWQPVVSNDIVPDFLKTHAANIDGATICGDISDPEILNSI 197 Query: 57 ----AKIKTQDIPDHDV-LLAGFPCQPFSQA 82 AK + +D PD + +L G PCQ FS A Sbjct: 198 CDAAAKFR-KDNPDSPLFVLGGPPCQGFSTA 227 >gi|42560766|ref|NP_975217.1| cytosine-specific DNA-methyltransferase Sau96I [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492262|emb|CAE76859.1| Cytosine-specific DNA-methyltransferase Sau96I [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320716|gb|ADK69359.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 341 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 9/59 (15%) Query: 34 EINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPDH--------DVLLAGFPCQPFSQAG 83 E + +V+T + N PN ++F D+ K+ +D+ D+L G PCQ FS AG Sbjct: 33 EFDKQAVETLKFNSPNWNIVFEDVQKVSQRDLKKEFNLKERELDLLSGGAPCQSFSYAG 91 >gi|284054995|ref|ZP_06385205.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] Length = 74 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDI 64 DLF G GG+ LE EC + + +++T+Q N P I GD+ +I T+ I Sbjct: 11 DLFSGAGGMSCGLEMA----GFECLLGVDFDKSAIQTFQNNHPQAETICGDLREISTEQI 66 Query: 65 PD 66 + Sbjct: 67 RE 68 >gi|257387778|ref|YP_003177551.1| DNA methyltransferase [Halomicrobium mukohataei DSM 12286] gi|257170085|gb|ACV47844.1| DNA methyltransferase [Halomicrobium mukohataei DSM 12286] Length = 239 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 13/77 (16%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DL G+GG E N R V E P I D+ ++ D+P Sbjct: 15 DLCAGLGGFSSAFEDAENWRVVTVEIEEEFEPD-------------ICADVLNLRPADLP 61 Query: 66 DHDVLLAGFPCQPFSQA 82 D++LA PC FS+A Sbjct: 62 AADIVLASPPCTTFSKA 78 >gi|270265139|ref|ZP_06193402.1| hypothetical protein SOD_k01780 [Serratia odorifera 4Rx13] gi|270041073|gb|EFA14174.1| hypothetical protein SOD_k01780 [Serratia odorifera 4Rx13] Length = 350 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 13/84 (15%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDI 64 DLFCG GG+ L+ + E+ + TY+ N P+ +++ DI + Q I Sbjct: 7 DLFCGAGGLTCGLKDA----GFKVLAGVEVEAVAADTYRTNHPDHVLYEADIRTLDPQKI 62 Query: 65 --------PDHDVLLAGFPCQPFS 80 D D+L PCQ FS Sbjct: 63 MQELHLQPGDLDLLAGCPPCQGFS 86 >gi|299531463|ref|ZP_07044871.1| DNA-cytosine methyltransferase [Comamonas testosteroni S44] gi|298720626|gb|EFI61575.1| DNA-cytosine methyltransferase [Comamonas testosteroni S44] Length = 435 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 11/83 (13%) Query: 7 LFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIAKIK 60 LF G GG+ L E+ F+H S EI +T ++N P ++ GD+ Sbjct: 123 LFAGGGGLDLGFERAGFSHTA-----SFEILDVCGETLRSNRPEWTVYSGAEAGDVRTAP 177 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + D++ G PCQPFS AG Sbjct: 178 FSNFRGVDIVHGGPPCQPFSIAG 200 >gi|307140960|ref|ZP_07500316.1| DNA-cytosine methyltransferase [Escherichia coli H736] gi|331645014|ref|ZP_08346131.1| DNA cytosine methyltransferase M.NgoMIII [Escherichia coli H736] gi|331035989|gb|EGI08227.1| DNA cytosine methyltransferase M.NgoMIII [Escherichia coli H736] Length = 413 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 15/92 (16%) Query: 2 LKITDLFCGIGGIRLDLE-QTFNHRNVECFFSSEINPYSVKTYQANFPN--------TLI 52 +K +LF G GG+ + E F H V E + ++ T + N N L Sbjct: 12 MKSVELFAGAGGLAMGCEIAGFEHLAV-----VEWDKWACDTVRENKKNGFPLLSDWDLF 66 Query: 53 FGDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83 GD+ + IP D+L G PCQPFS G Sbjct: 67 EGDVREFDWSKIPKGIDLLAGGPPCQPFSIGG 98 >gi|113478056|ref|YP_724117.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] gi|110169104|gb|ABG53644.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] Length = 345 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 10/81 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLFCG GG+ E+ NV +I+P Y+ N I + I++ ++ Sbjct: 8 DLFCGAGGLTHGFEKAGLPVNV----GYDIDPVCKFPYEYNNKAKFILKSVEDIESMELA 63 Query: 66 DH------DVLLAGFPCQPFS 80 H VL PCQPFS Sbjct: 64 KHFPICHLKVLAGCSPCQPFS 84 >gi|225849813|ref|YP_002730047.1| putative modification methylase FnuDI [Persephonella marina EX-H1] gi|225646519|gb|ACO04705.1| putative modification methylase FnuDI [Persephonella marina EX-H1] Length = 307 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 6/79 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DLFCG+GG L + +IN + K ++ N I D+ Sbjct: 1 MKVLDLFCGMGGFSYGLSKAGYE-----ITGVDINKWVEKIFEKNCIGKAIIKDLKNDFI 55 Query: 62 QDIPDHDVLLAGFPCQPFS 80 D + D+++ G PC+P+S Sbjct: 56 FD-ENPDIIVGGSPCKPWS 73 >gi|212695555|ref|ZP_03303683.1| hypothetical protein ANHYDRO_00072 [Anaerococcus hydrogenalis DSM 7454] gi|212677433|gb|EEB37040.1| hypothetical protein ANHYDRO_00072 [Anaerococcus hydrogenalis DSM 7454] Length = 321 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 17/89 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +KI +LF GIG IR + F + + E EI+ VK+Y A ++G+ K Sbjct: 4 VKILELFGGIGAIR----KAFINLKIPYEVVDYVEIDKACVKSYNA------LYGENYKP 53 Query: 60 KT---QDIPDH--DVLLAGFPCQPFSQAG 83 K+ IP+ D+++ G PCQ FS+ G Sbjct: 54 KSVVGYKIPNEKIDLIMHGSPCQDFSRIG 82 >gi|328769954|gb|EGF79997.1| hypothetical protein BATDEDRAFT_35320 [Batrachochytrium dendrobatidis JAM81] Length = 621 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ + F GIGG+ LE V F +INP + Y NF + I + Sbjct: 5 VRALEFFSGIGGMHFGLEWAAIDAKVVAAF--DINPQANACYNHNFGLEPVEKSIQDLNP 62 Query: 62 QDIPDHDV--LLAGFPCQPFSQAG 83 +++ +D L PCQP+++ G Sbjct: 63 KELERYDANCWLMSPPCQPYTRTG 86 >gi|153852755|ref|ZP_01994192.1| hypothetical protein DORLON_00174 [Dorea longicatena DSM 13814] gi|149754397|gb|EDM64328.1| hypothetical protein DORLON_00174 [Dorea longicatena DSM 13814] Length = 367 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 14/20 (70%), Positives = 16/20 (80%) Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +PD D+L AGFPCQ FS AG Sbjct: 1 MPDFDLLCAGFPCQAFSIAG 20 >gi|313668701|ref|YP_004048985.1| modification methylase [Neisseria lactamica ST-640] gi|313006163|emb|CBN87625.1| putative modification methylase [Neisseria lactamica 020-06] Length = 372 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 9/85 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIF--GDIAKI 59 + +F GIG + EQ F N+ F+ +I+ + K+Y N+ F DI + Sbjct: 1 MATVFSGIGAV----EQAFYRLNLNHTIVFAGDIDSHVKKSYLGNYKLNEDFWHNDITQF 56 Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83 + + D+L+ G PCQ FS G Sbjct: 57 DARKFRNQVDILVGGSPCQAFSMVG 81 >gi|146309050|ref|YP_001189515.1| DNA-cytosine methyltransferase [Pseudomonas mendocina ymp] gi|145577251|gb|ABP86783.1| DNA-cytosine methyltransferase [Pseudomonas mendocina ymp] Length = 365 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 10/89 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML + DLF G GG+ L +Q + +I+P ++ NFP+ Sbjct: 1 MLTLLDLFSGCGGLTLGAKQA----GFTTELAVDIDPILSSSFGLNFPSVPFLNADVTTL 56 Query: 61 TQD-----IPDH-DVLLAGFPCQPFSQAG 83 T D +P D ++ G PCQ FS G Sbjct: 57 TSDRLKALLPSGVDGVIGGPPCQAFSGMG 85 >gi|41584550|gb|AAS09913.1| BsmBI M1-M2 methyltransferase fusion protein [Geobacillus stearothermophilus] Length = 1068 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 17/91 (18%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--IFGDI--AKIKT 61 DLF G GG L F +E + EI+ + +TY N + + I GDI +I+ Sbjct: 796 DLFAGAGG----LSYGFELAGLEGMAALEIDKDAAETYAKNHSSNIDVIVGDIRSPEIQN 851 Query: 62 QDIPD---------HDVLLAGFPCQPFSQAG 83 Q I D++ G PCQ FS AG Sbjct: 852 QLIESVKNKLKGRTLDLIAGGLPCQGFSTAG 882 >gi|290892537|ref|ZP_06555530.1| site-specific DNA-methyltransferase BsuRI [Listeria monocytogenes FSL J2-071] gi|290557846|gb|EFD91367.1| site-specific DNA-methyltransferase BsuRI [Listeria monocytogenes FSL J2-071] Length = 409 Score = 35.8 bits (81), Expect = 1.7, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 32/53 (60%) Query: 31 FSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +S+++ + +TY ANF + ++ ++ K + P ++++ GFPC FS AG Sbjct: 110 YSNDMFKEANETYLANFQSNILKQELDIRKIPNFPKCELMIGGFPCPGFSAAG 162 >gi|94263940|ref|ZP_01287743.1| DNA (cytosine-5-)-methyltransferase [delta proteobacterium MLMS-1] gi|93455685|gb|EAT05864.1| DNA (cytosine-5-)-methyltransferase [delta proteobacterium MLMS-1] Length = 366 Score = 35.8 bits (81), Expect = 1.7, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 13/87 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---------NTLIFG 54 + D FCG GG + F ++ F+ + P + T++ NFP N L Sbjct: 12 VFDFFCGCGGT----SRGFQKAGIDVAFALDTGPDAKSTFERNFPGTFFCHKSINELNAS 67 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81 D+ I + + PCQPF++ Sbjct: 68 DLEPILQAHKNGYKLFCGCAPCQPFTR 94 >gi|114776547|ref|ZP_01451592.1| 23S rRNA (uracil-5-)-methyltransferase [Mariprofundus ferrooxydans PV-1] gi|114553377|gb|EAU55775.1| 23S rRNA (uracil-5-)-methyltransferase [Mariprofundus ferrooxydans PV-1] Length = 415 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 +I DLFCGIG + L L F +E+NP SV+ Q N Sbjct: 274 RIADLFCGIGNLSLPLAVATGAE----LFGAELNPASVRAAQTN 313 >gi|307152624|ref|YP_003888008.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306982852|gb|ADN14733.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 708 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 6/80 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLF G GG+ L E E++ + TYQ N + + T Sbjct: 34 VIDLFAGCGGLALGFEAAGFKTT-----GYEMSEEACATYQYNLHGRCENITLTRYPTL- 87 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 I + V++AG PCQPFS+ G Sbjct: 88 IDNPKVIIAGPPCQPFSKGG 107 >gi|239929797|ref|ZP_04686750.1| putative 5-methylcytosine methyltransferase [Streptomyces ghanaensis ATCC 14672] gi|291438128|ref|ZP_06577518.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291341023|gb|EFE67979.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 356 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI DLF G GG+ + E+ V E + + T +A T + GD+ Sbjct: 5 KIVDLFAGPGGLDVAAEKL----GVPTV-GIEWDSAACATRRAAGLET-VEGDVRLYGPS 58 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 D P+ DVL G PCQ F+ AG Sbjct: 59 DFPEADVLAGGPPCQTFTVAG 79 >gi|217965593|ref|YP_002351271.1| modification methylase (cytosine-specific methyltransferase) [Listeria monocytogenes HCC23] gi|217334863|gb|ACK40657.1| modification methylase (cytosine-specific methyltransferase) [Listeria monocytogenes HCC23] gi|307569856|emb|CAR83035.1| methyltransferase [Listeria monocytogenes L99] Length = 411 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 32/53 (60%) Query: 31 FSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +S+++ + +TY ANF + ++ ++ K + P ++++ GFPC FS AG Sbjct: 110 YSNDMFKEANETYLANFQSNILKQELDIRKIPNFPKCELMIGGFPCPGFSAAG 162 >gi|154173655|ref|YP_001409100.1| cytosine-specific methyltransferase NlaX [Campylobacter curvus 525.92] gi|112802981|gb|EAU00325.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Campylobacter curvus 525.92] Length = 352 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 13/89 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFG 54 + + +F GIG + F ++ F+ EI+ ++ ++Y AN F + Sbjct: 6 IALATIFSGIGSAEFAAREVFAEYDMA--FACEIDKFARQSYLANHAIDEKHFHCNIKEL 63 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D AKI T + DVL+ G PCQ FS AG Sbjct: 64 D-AKIYTDKV---DVLIGGSPCQDFSLAG 88 >gi|291515626|emb|CBK64836.1| DNA-methyltransferase (dcm) [Alistipes shahii WAL 8301] Length = 360 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ DLFCGIGG+ ++ + +++ Y+ N I+ DI + Sbjct: 14 IEVIDLFCGIGGLSFGMKS----KGFNILAGYDLDATCRYAYETNNNAKFIYKDIKTVSP 69 Query: 62 QDIPDH------DVLLAGFPCQPFS 80 +I VL PCQPFS Sbjct: 70 DEIRTAYGKGSIRVLAGCAPCQPFS 94 >gi|325679553|ref|ZP_08159133.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8] gi|324108840|gb|EGC03076.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8] Length = 708 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 11/88 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDI--AKIK 60 + DLF G GG +E+ + R + + N +++T++ N P+T ++ GDI + +K Sbjct: 351 VLDLFSGAGGFSYGIEKNEHFRTA---IALDFNEQALQTFKHNMPDTEIVHGDITDSAVK 407 Query: 61 TQDI-----PDHDVLLAGFPCQPFSQAG 83 + I ++++ G PCQ FS G Sbjct: 408 ERIISLSKEKKVNMVIGGPPCQGFSLKG 435 >gi|317127845|ref|YP_004094127.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] gi|315472793|gb|ADU29396.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] Length = 363 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 11/88 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAK 58 KI DLF G+GG L E E + + +++TY N N + D++K Sbjct: 5 KIIDLFSGVGGFSLGFEMA----GYETVLAIDFWKDAIETYNHNRENKVAEVMSIHDLSK 60 Query: 59 IKTQDI-PDHDV--LLAGFPCQPFSQAG 83 + + + DH + ++ G PCQ FS G Sbjct: 61 ERLEKLKSDHTIEGIIGGPPCQGFSTVG 88 >gi|182437151|ref|YP_001824870.1| putative SacI methylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465667|dbj|BAG20187.1| putative SacI methylase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 363 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 16/89 (17%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAKIKTQD 63 LF G GG+ L +E E + E N +V T + NF + +I DI ++ T++ Sbjct: 20 LFSGAGGLDLGVEAA----GYEVRAAVEHNADAVATMEKNFSHLQSEVIQRDILEVPTKE 75 Query: 64 I---------PDHDVLLAGFPCQPFSQAG 83 + D+L+ G PC PFS++G Sbjct: 76 LLGAAGLKGRERPDLLVGGPPCTPFSKSG 104 >gi|219848287|ref|YP_002462720.1| DNA-cytosine methyltransferase [Chloroflexus aggregans DSM 9485] gi|219542546|gb|ACL24284.1| DNA-cytosine methyltransferase [Chloroflexus aggregans DSM 9485] Length = 362 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 13/87 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 + DLF G GG+ F + + E +P + +TY N P ++ DI I Sbjct: 9 MIDLFAGCGGV----TTGFKAKGFNVLAAVEFDPVTAQTYHLNHPEVALYVQDIRDISPN 64 Query: 63 DIPDH--------DVLLAGFPCQPFSQ 81 ++ VL PCQPFS+ Sbjct: 65 EMMARCRLERGHLTVLSVCAPCQPFSK 91 >gi|75812610|ref|YP_320229.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] gi|75705366|gb|ABA25040.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] Length = 253 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 34/89 (38%), Gaps = 12/89 (13%) Query: 1 MLKITDLFCGIGGI------RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 M + LF GIGG+ L F R EI+PYS + P T I Sbjct: 1 MKSVLSLFSGIGGLCHHGIAAAGLSHKFQVRQF-----VEISPYSQSVLRYEQPQTPIHS 55 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI D+L GFPC S +G Sbjct: 56 DITTYHCNR-GQFDILCGGFPCAGTSNSG 83 >gi|308183851|ref|YP_003927984.1| cytosine specific DNA methyltransferase [Helicobacter pylori SJM180] gi|308059771|gb|ADO01667.1| cytosine specific DNA methyltransferase [Helicobacter pylori SJM180] Length = 355 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAK--I 59 KI DLFCG GG LE + + + + ++ T++ N N + + GDI + I Sbjct: 4 KILDLFCGAGGFSAGLEYL---KEFDALIGLDCDKQALITFENNHKNAIGVCGDITQTEI 60 Query: 60 KTQDIP-----DHDVLLAGFPCQPFSQAG 83 K + I + ++++ G PCQ FS G Sbjct: 61 KEKVIELAKKLEINMIIGGPPCQGFSNKG 89 >gi|315268237|gb|ADT95090.1| DNA-cytosine methyltransferase [Shewanella baltica OS678] Length = 350 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLFCG GG+ L++ ++ +I P Y+ N I +A++ Sbjct: 3 IRAIDLFCGAGGLTHGLQRA----GIDVIAGYDIEPQCRYAYEKNNKAVFIQESVAELTE 58 Query: 62 QDIP----DHDV-LLAG-FPCQPFS 80 + D D+ ++AG PCQPFS Sbjct: 59 DEFSHYYGDADIRVMAGCAPCQPFS 83 >gi|71899200|ref|ZP_00681363.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Ann-1] gi|71731058|gb|EAO33126.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Ann-1] Length = 387 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 10/81 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLFCG+GG+ L + + +I+P ++AN + D+A++K + Sbjct: 18 DLFCGVGGLTHGLARG----GISVAAGIDIDPNCQFPFEANNAALFLECDVARLKAAAVK 73 Query: 66 DH----DV-LLAG-FPCQPFS 80 D+ LLAG PCQPFS Sbjct: 74 GFYQAADITLLAGCAPCQPFS 94 >gi|300791025|ref|YP_003771316.1| DNA (cytosine-5-)-methyltransferase [Amycolatopsis mediterranei U32] gi|299800539|gb|ADJ50914.1| DNA (cytosine-5-)-methyltransferase [Amycolatopsis mediterranei U32] Length = 435 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 19/95 (20%) Query: 3 KITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 ++ +L G GG L LE+ F HR + E++ + T Q N P + Sbjct: 11 EVVELCAGAGGQALGLERAGFKHR-----LAVELDSNAFTTLQTNIPGKIEINEEEREIV 65 Query: 54 --GDIAKIKTQDIPDHD---VLLAGFPCQPFSQAG 83 GD+A + DH +L G PC PF+ AG Sbjct: 66 QQGDVADPAVFNPEDHREVALLAGGVPCPPFTIAG 100 >gi|330802352|ref|XP_003289182.1| hypothetical protein DICPUDRAFT_153508 [Dictyostelium purpureum] gi|325080758|gb|EGC34300.1| hypothetical protein DICPUDRAFT_153508 [Dictyostelium purpureum] Length = 378 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ + + GIGG+ L+++ E S +IN ++ Y+ F +I + Sbjct: 18 LRVLEFYSGIGGMHYGLKES--GVKFEVVQSFDINTNAILNYKYTFNENTSQKNIESLTV 75 Query: 62 QDIPD--HDVLLAGFPCQPFSQAG 83 ++I + + L PCQPF+++G Sbjct: 76 EEIDNFKSNAWLMSPPCQPFTRSG 99 >gi|71893964|ref|YP_279410.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae J] gi|71852091|gb|AAZ44699.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae J] Length = 329 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 43/92 (46%), Gaps = 19/92 (20%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIF--GDI--A 57 DLF G GG+ L S EI +V+TY NF N +F DI + Sbjct: 19 DLFSGAGGLSCGLVMA----GFLPLASLEIMKQAVETYAYNFKKRSKNKELFKLSDIRDS 74 Query: 58 KIKTQDIPDH------DVLLAGFPCQPFSQAG 83 KIK++ DH D++ GFPCQ FS AG Sbjct: 75 KIKSE-FYDHFKDQELDLIAGGFPCQGFSMAG 105 >gi|312200624|ref|YP_004020685.1| C-5 cytosine-specific DNA methylase [Frankia sp. EuI1c] gi|311231960|gb|ADP84815.1| C-5 cytosine-specific DNA methylase [Frankia sp. EuI1c] Length = 391 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 +++ L GIG + L LE+ + E +P+ + ++P D+ Sbjct: 1 MRVLSLCSGIGALDLGLERA----GLTTVGQVERDPFCQRVLARHWPEVPRHDDVLTTTE 56 Query: 61 ----TQDIPDHDVLLAGFPCQPFSQAG 83 D P DV+ GFPCQP S AG Sbjct: 57 WWTAQPDRPTVDVVAGGFPCQPASVAG 83 >gi|325279948|ref|YP_004252490.1| DNA-cytosine methyltransferase [Odoribacter splanchnicus DSM 20712] gi|324311757|gb|ADY32310.1| DNA-cytosine methyltransferase [Odoribacter splanchnicus DSM 20712] Length = 359 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 14/89 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L+ D FCG GG+ L Q VE ++ TY+AN P T G DI K++ Sbjct: 4 LRAIDFFCGGGGMTCGLRQA----GVEVMAGVDLAEECESTYEANNPGTKFVGADITKLE 59 Query: 61 TQDIP---------DHDVLLAGFPCQPFS 80 D+ VL+ PCQ +S Sbjct: 60 ENYFEKQFGLIRNDDNLVLVGCSPCQYYS 88 >gi|261838928|gb|ACX98693.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori 52] Length = 355 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAK--- 58 KI DLFCG GG LE + + + ++ T++ N N + + GDI + Sbjct: 4 KILDLFCGAGGFSTGLECL---EEFDALIGLDCDKQALITFENNHKNAIGVCGDITQTEI 60 Query: 59 ----IKTQDIPDHDVLLAGFPCQPFSQAG 83 IK + ++++ G PCQ FS G Sbjct: 61 KEKVIKLAQTLEINMIIGGPPCQGFSNKG 89 >gi|313677760|ref|YP_004055756.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] gi|312944458|gb|ADR23648.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] Length = 346 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 11/87 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGDIA 57 + DLFCG GG L Q F + + +++T+ N N+ L+ D Sbjct: 7 VIDLFCGCGG----LSQGFIEADYNVILGIDHWKDAIETFNYNHKNSKGIVADLLNLDPQ 62 Query: 58 KIKTQ-DIPDHDVLLAGFPCQPFSQAG 83 +IKT+ I + D+++ G PCQ FS AG Sbjct: 63 EIKTRYAIENVDLIVGGPPCQGFSIAG 89 >gi|28198487|ref|NP_778801.1| site-specific DNA-methyltransferase [Xylella fastidiosa Temecula1] gi|182681164|ref|YP_001829324.1| DNA-cytosine methyltransferase [Xylella fastidiosa M23] gi|28056571|gb|AAO28450.1| site-specific DNA-methyltransferase [Xylella fastidiosa Temecula1] gi|182631274|gb|ACB92050.1| DNA-cytosine methyltransferase [Xylella fastidiosa M23] gi|307579611|gb|ADN63580.1| DNA-cytosine methyltransferase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 355 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 10/81 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI- 64 DLFCG+GG+ L + + +I+P ++AN + D+A++K + Sbjct: 18 DLFCGVGGLTHGLARG----GISVAAGIDIDPNCQFPFEANNAALFLECDVARLKAAAVR 73 Query: 65 -----PDHDVLLAGFPCQPFS 80 D +L PCQPFS Sbjct: 74 GFYQAADITLLAGCAPCQPFS 94 >gi|317488614|ref|ZP_07947157.1| C-5 cytosine-specific DNA methylase [Eggerthella sp. 1_3_56FAA] gi|316912266|gb|EFV33832.1| C-5 cytosine-specific DNA methylase [Eggerthella sp. 1_3_56FAA] Length = 308 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAK 58 ++ DLFCG GG L F E + ++ TY AN P+ L GD++ Sbjct: 7 VQTIDLFCGCGG----LTAGFRAAGFENLVGFDNWQAALDTYSANNPDQGEMLDLGDLSA 62 Query: 59 I--KTQDIPDHDVLLAGFPCQPFSQAG 83 + + D ++ G PCQ FS AG Sbjct: 63 SLERLAEYKGIDGVIGGPPCQDFSSAG 89 >gi|156050777|ref|XP_001591350.1| hypothetical protein SS1G_07976 [Sclerotinia sclerotiorum 1980] gi|154692376|gb|EDN92114.1| hypothetical protein SS1G_07976 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1392 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 25/95 (26%) Query: 6 DLFCGIGGIRLDLEQ---TFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAK 58 DLFCG G LE+ N V+ F ++ V+TY N + + FG + Sbjct: 657 DLFCGGGNFGRGLEEGGAVHNKWAVDLFSAA------VQTYSTNLKDPEGTDMFFGSVND 710 Query: 59 IKTQ---------DIP---DHDVLLAGFPCQPFSQ 81 + Q IP D DV+LAG PCQ FS+ Sbjct: 711 LLVQAFEGNPQKFRIPSPGDVDVILAGSPCQGFSR 745 >gi|3913215|sp|Q44258|CBAC_COMTE RecName: Full=1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase gi|2073552|gb|AAC45718.1| 1-carboxy-3-chloro-3,4-dihydroxycyclohexa-1,5-diene dehydrogenase [Conidiobolus coronatus] Length = 397 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Query: 25 RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQ 77 R V+ +S+ +P S++ ++A+FP + GDI + PD +V+ G P Q Sbjct: 23 RRVQLVAASDTDPLSLRQFKADFPAAAVHGDIESLCKN--PDVEVVYIGTPHQ 73 >gi|310657622|ref|YP_003935343.1| cytosine-specific methyltransferase [Clostridium sticklandii DSM 519] gi|308824400|emb|CBH20438.1| Cytosine-specific methyltransferase [Clostridium sticklandii] Length = 344 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 13/90 (14%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 + + DLFCG GG+ EQ FN + + +++T++ N N+ I GDI +I Sbjct: 1 MNLIDLFCGCGGLSYGFEQAGFN-----VLLGIDNDKAALETFKLNHKNSKTICGDIREI 55 Query: 60 KTQDIPDH------DVLLAGFPCQPFSQAG 83 +I + D+++ G PCQ S +G Sbjct: 56 TFDEINNVIGNKKIDLIVGGPPCQGMSLSG 85 >gi|72255517|ref|NP_001026813.1| tRNA (cytosine-5-)-methyltransferase [Rattus norvegicus] gi|115311703|sp|Q4G073|TRDMT_RAT RecName: Full=tRNA (cytosine-5-)-methyltransferase; AltName: Full=DNA (cytosine-5)-methyltransferase-like protein 2; Short=Dnmt2 gi|71051331|gb|AAH98700.1| TRNA aspartic acid methyltransferase 1 [Rattus norvegicus] gi|149021112|gb|EDL78719.1| DNA methyltransferase 2 [Rattus norvegicus] Length = 391 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L++ +L+ GIGG+ L ++ +V + +++ + + Y+ NFP+T L+ I I Sbjct: 4 LRVLELYSGIGGMHHALRESRVPAHVVA--AIDVSTVANEVYKHNFPHTHLLAKTIEGIS 61 Query: 61 TQ--DIPDHDVLLAGFPCQPFSQAG 83 + D +++L PCQPF++ G Sbjct: 62 LEEFDKLSFNMILMSPPCQPFTRIG 86 >gi|123965679|ref|YP_001010760.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT 9515] gi|123200045|gb|ABM71653.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT 9515] Length = 689 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 14/85 (16%) Query: 6 DLFCGIGGIRLDLEQTFNHR-NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT-QD 63 DLF G GG+ L L HR N + + +I S+ T++ +F D++K K + Sbjct: 56 DLFSGAGGLSLGL-----HRANFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVVNE 110 Query: 64 IPDH-------DVLLAGFPCQPFSQ 81 I D ++ G PCQPFS+ Sbjct: 111 IADKLNECGEISLIAGGPPCQPFSR 135 >gi|330465519|ref|YP_004403262.1| DNA-cytosine methyltransferase [Verrucosispora maris AB-18-032] gi|328808490|gb|AEB42662.1| DNA-cytosine methyltransferase [Verrucosispora maris AB-18-032] Length = 392 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 10/84 (11%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDIAKIK 60 + F GIG +RL LE + +S++I P + Y +F +T GDIA ++ Sbjct: 20 EFFAGIGLVRLGLEDA----GFKVIWSNDIEPDKKEMYVRHFNDPEGTHTYKRGDIADVR 75 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 + D + A FPC S AG Sbjct: 76 GPQMVDELSLAWASFPCTDLSLAG 99 >gi|94990422|ref|YP_598522.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10270] gi|94543930|gb|ABF33978.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10270] Length = 110 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 10/80 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL L + EC EI+ ++ ++Y+A + + F DI ++ Sbjct: 4 MKFLDLFAGIGGFRLGLINQCH----ECIGFCEIDKFARQSYKAIYETEGEIEFHDIRQV 59 Query: 60 KTQDIPDH----DVLLAGFP 75 QD D++ GF Sbjct: 60 TDQDFRQLRGQVDIICGGFS 79 >gi|309789605|ref|ZP_07684186.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6] gi|308228341|gb|EFO81988.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6] Length = 342 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 9/83 (10%) Query: 2 LKITDLFCGIGGIRLDLE-QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + + DLF G GG+ L E Q E +P + +TY N + +++ I Sbjct: 21 ISVLDLFAGCGGLALGFEAQGLKTHGFE------KDPDAAQTYCNNLGSPCEHVELS-ID 73 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 T P DV++ G PCQPFS G Sbjct: 74 TV-YPQADVVIGGPPCQPFSVGG 95 >gi|330940085|gb|EGH43270.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. pisi str. 1704B] Length = 502 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAK----IKTQDIPDHDVLLAGFPCQPFSQA 82 +E + +EI P+ ++P T GD+ K + I DVL+ G PCQ F A Sbjct: 26 MEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGALVLAGKIKAPDVLVGGTPCQAFRVA 85 Query: 83 G 83 G Sbjct: 86 G 86 >gi|67540936|ref|XP_664242.1| hypothetical protein AN6638.2 [Aspergillus nidulans FGSC A4] gi|28208637|gb|AAO37378.1|AF428247_1 c5 cytosine methyltransferase DmtA [Emericella nidulans] gi|40738977|gb|EAA58167.1| hypothetical protein AN6638.2 [Aspergillus nidulans FGSC A4] gi|259480219|tpe|CBF71150.1| TPA: C5 cytosine methyltransferase DmtAPutative uncharacterized protein ; [Source:UniProtKB/TrEMBL;Acc:Q876R1] [Aspergillus nidulans FGSC A4] Length = 615 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKT--Q 62 D FCG GG+ E ++ ++ ++ P++ TY+ NFPN G DI T + Sbjct: 313 DGFCGAGGVSCGAEAA----GLDIKWAFDLCPHAAATYRLNFPNVECEGSDIFSFMTSNE 368 Query: 63 DIPDHDVLLAGFPCQPFSQA 82 + D+ PCQ FS A Sbjct: 369 EFMRVDISHGSPPCQTFSPA 388 >gi|320180750|gb|EFW55676.1| DNA-cytosine methyltransferase [Shigella boydii ATCC 9905] Length = 340 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 24/93 (25%) Query: 2 LKITDLFCGIGGIR-------LDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 +K+ DLFCG GG+ LD+ + EC F Y+ N + I Sbjct: 3 VKVIDLFCGAGGLTHGLQLAGLDVVAGIDLEG-ECRFP----------YERNNKSKFIEQ 51 Query: 55 DIAKIKTQDI----PDHDV-LLAG-FPCQPFSQ 81 DIAK+ +++ D V +LAG PCQPFS+ Sbjct: 52 DIAKVTKEELLRLYGDASVKVLAGCAPCQPFSK 84 >gi|301328257|ref|ZP_07221377.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1] gi|300845286|gb|EFK73046.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1] Length = 341 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 24/93 (25%) Query: 2 LKITDLFCGIGGIR-------LDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 +K+ DLFCG GG+ LD+ + EC F Y+ N + I Sbjct: 4 VKVIDLFCGAGGLTHGLQLAGLDVVAGIDLEG-ECRFP----------YERNNKSKFIEQ 52 Query: 55 DIAKIKTQDI----PDHDV-LLAG-FPCQPFSQ 81 DIAK+ +++ D V +LAG PCQPFS+ Sbjct: 53 DIAKVTKEELLRLYGDASVKVLAGCAPCQPFSK 85 >gi|15675067|ref|NP_269241.1| putative methyl transferase [Streptococcus pyogenes M1 GAS] gi|71910613|ref|YP_282163.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS5005] gi|306827418|ref|ZP_07460705.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pyogenes ATCC 10782] gi|13622222|gb|AAK33962.1| putative methyl transferase [Streptococcus pyogenes M1 GAS] gi|71853395|gb|AAZ51418.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS5005] gi|304430565|gb|EFM33587.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pyogenes ATCC 10782] Length = 107 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 10/80 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL L + EC EI+ ++ ++Y+A + + F DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGLINQCH----ECIGFCEIDKFARQSYKAIYETEGEIEFHDIRQV 56 Query: 60 KTQDIPDH----DVLLAGFP 75 QD D++ GF Sbjct: 57 TDQDFRQLRGQVDIICGGFS 76 >gi|262280408|ref|ZP_06058192.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus RUH2202] gi|262258186|gb|EEY76920.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus RUH2202] Length = 354 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 15/90 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 +K+ D F G GG L Q ++ + + + +TY+ANFP + DI ++ Sbjct: 1 MKVIDFFSGCGGASEGLRQA----GLDIAIGLDFDKKASETYEANFPEAKFYNVDIRELD 56 Query: 61 TQDIP----------DHDVLLAGFPCQPFS 80 +++ + +L+A PCQPFS Sbjct: 57 EKELAAAFKDINQKEEPLLLVACAPCQPFS 86 >gi|94994344|ref|YP_602442.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10750] gi|94547852|gb|ABF37898.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10750] Length = 119 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 10/80 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 +K DLF GIGG RL L + EC EI+ ++ ++Y+A + + F DI ++ Sbjct: 4 MKFLDLFAGIGGFRLGLINQCH----ECIGFCEIDKFARQSYKAIYETEGEIEFHDIRQV 59 Query: 60 KTQDIPDH----DVLLAGFP 75 QD D++ GF Sbjct: 60 TDQDFRQLRGQVDIICGGFS 79 >gi|313665138|ref|YP_004047009.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma leachii PG50] gi|312949950|gb|ADR24546.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma leachii PG50] Length = 342 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 9/59 (15%) Query: 34 EINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPDH--------DVLLAGFPCQPFSQAG 83 E + +V+T + N PN +IF D+ K +D+ D+L G PCQ FS AG Sbjct: 33 EFDKQAVETLKFNRPNWNIIFEDVQKASQRDLKKEFNLKERELDLLSGGAPCQSFSYAG 91 >gi|325955715|ref|YP_004293189.1| modification methylase BsuRI [Lactobacillus acidophilus 30SC] gi|325334695|gb|ADZ08248.1| modification methylase BsuRI [Lactobacillus acidophilus 30SC] Length = 406 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 15 RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGF 74 R +L + + NV +S+++ + TY+ NF + K P D++L GF Sbjct: 95 RRELSKLLDSTNV--IYSNDLFASANATYKDNFSGNYVKDTRDVRKVISFPKADLVLGGF 152 Query: 75 PCQPFSQAG 83 PC FS AG Sbjct: 153 PCPGFSVAG 161 >gi|291521423|emb|CBK79716.1| DNA-methyltransferase (dcm) [Coprococcus catus GD/7] Length = 521 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 40/94 (42%), Gaps = 20/94 (21%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 MLK DLF G GG+ E T V ++E N + KTY N DI I Sbjct: 1 MLKTIDLFAGAGGLSYGFESTGEFLIVA---AAENNKNARKTYIENHKGR---NDIRLIP 54 Query: 61 TQDIPDH------------DVLLAGFPCQPFSQA 82 D+ D+ DV++ G PCQ FS A Sbjct: 55 --DVRDYDFSALASEFDGIDVVIGGPPCQGFSNA 86 >gi|213969524|ref|ZP_03397660.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato T1] gi|301385979|ref|ZP_07234397.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato Max13] gi|302059871|ref|ZP_07251412.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato K40] gi|302131547|ref|ZP_07257537.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925620|gb|EEB59179.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato T1] Length = 406 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDI 64 + F G G R L +N C ++++++ TY N+ + DI +KT+D+ Sbjct: 16 EFFAGGGMARAGLGDEWN-----CLYANDMDHIKAATYINNWGGSHFDERDIHDVKTEDL 70 Query: 65 -PDHDVLLAGFPCQPFSQAG 83 + D+ A FPCQ S AG Sbjct: 71 KSNSDLAWASFPCQDLSVAG 90 >gi|303236368|ref|ZP_07322958.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] gi|302483426|gb|EFL46431.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] Length = 357 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 12/88 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 I DLFCG GG L + F + +I ++ T++ N + D++ ++ Sbjct: 9 IIDLFCGCGG----LSKGFEEAGYKTLLGVDIEQNALNTFEKNHNGAVGLNLDLSASESF 64 Query: 63 DIPDH-------DVLLAGFPCQPFSQAG 83 D D DV++ G PCQ FS G Sbjct: 65 DKIDEVVKGRAIDVIIGGPPCQGFSLTG 92 >gi|210134246|ref|YP_002300685.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12] gi|210132214|gb|ACJ07205.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12] Length = 355 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDI--AKI 59 KI DLFCG GG LE + + + ++ T++ N N + + GDI A I Sbjct: 4 KILDLFCGAGGFSAGLECL---EEFDALIGLDCDKQALITFENNHKNAIGVCGDITQAAI 60 Query: 60 KTQDIP-----DHDVLLAGFPCQPFSQAG 83 K + I + ++++ G PCQ FS G Sbjct: 61 KEKVIKLAQKLEINMIIGGPPCQGFSNKG 89 >gi|329113622|ref|ZP_08242401.1| Modification methylase HpaII [Acetobacter pomorum DM001] gi|326697068|gb|EGE48730.1| Modification methylase HpaII [Acetobacter pomorum DM001] Length = 389 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 8/83 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAK 58 M + F G G R L + C F+++ + +YQAN+ L GD+ Sbjct: 8 MPSFYEFFAGGGMARAGLGDGWT-----CLFANDFDHKKGLSYQANWGTGGELRVGDVND 62 Query: 59 IKTQDIPD-HDVLLAGFPCQPFS 80 ++ +D+P D++ FPCQ S Sbjct: 63 VRVEDLPGVADLVWGSFPCQDLS 85 >gi|462658|sp|P34878|MTSB_LACLC RecName: Full=Modification methylase ScrFIB; Short=M.ScrFI-B; Short=M.ScrFIB; AltName: Full=Cytosine-specific methyltransferase ScrFIB gi|149495|gb|AAA16838.1| methyl-5-cytosine methylase [Lactococcus lactis] gi|2327032|gb|AAB66694.1| 5-methyl-cytosine-methyltransferase [Lactococcus lactis subsp. cremoris] gi|739995|prf||2004282A methyl-5-cytosine methyltransferase Length = 360 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 15/31 (48%), Positives = 17/31 (54%) Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 FGDI I + +PD D FPCQ S AG Sbjct: 104 FGDIRSIDPKKLPDFDFFTYSFPCQDISVAG 134 >gi|71274663|ref|ZP_00650951.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Dixon] gi|71899625|ref|ZP_00681779.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Ann-1] gi|71164395|gb|EAO14109.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Dixon] gi|71730577|gb|EAO32654.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Ann-1] Length = 329 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 ++ G GG L LE FNH + E+ P + T + N P +I D+ + Sbjct: 19 EMCAGAGGQALGLEMVGFNHAAL-----VELEPTACATLRLNRPAWNVIEDDLRRFDGLP 73 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D++ G PC PFS+AG Sbjct: 74 YQGIDLVAGGVPCPPFSKAG 93 >gi|241204300|ref|YP_002975396.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858190|gb|ACS55857.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 662 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L + +L G GG+ L LE H + F E + ++ T + N P ++ GDI ++ Sbjct: 296 LNVIELCAGAGGMSLGLEDAGFH-PLALF---EFDKHAAATLRLNRPLWNVVEGDIRQVD 351 Query: 61 TQDIPDH--DVLLAGFPCQPFSQAG 83 D+L+ G PCQPFS G Sbjct: 352 FTPYRSAGVDLLVGGLPCQPFSIDG 376 >gi|34014717|dbj|BAC81824.1| methylase [Acidocella facilis] Length = 443 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 19/90 (21%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---------LIFGDI 56 DLF G GG+ L EQ + + E++P ++ NFP T L +I Sbjct: 7 DLFAGAGGLSLGFEQA----GFDVVAAVEVDPVHCGVHKFNFPQTAVVPRSVVGLTAAEI 62 Query: 57 ---AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 A I + + D + G PCQ FS G Sbjct: 63 RLAAGIGNRPV---DCVFGGPPCQGFSMIG 89 >gi|283456339|ref|YP_003360903.1| cytosine methyl transferase [Bifidobacterium dentium Bd1] gi|283102973|gb|ADB10079.1| dcm Cytosine methyl transferase [Bifidobacterium dentium Bd1] Length = 509 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 13/86 (15%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI-- 64 F G GG+ L +EQ + C E + + N+P+ + GDI ++ + Sbjct: 138 FFTGAGGLDLGMEQAGISARLLCENMRE----ARMSIGVNWPDKALVGDITELDAVTVRR 193 Query: 65 -------PDHDVLLAGFPCQPFSQAG 83 + DV+ G PCQ FS AG Sbjct: 194 MAGLDEDTEIDVMFGGPPCQAFSTAG 219 >gi|171742574|ref|ZP_02918381.1| hypothetical protein BIFDEN_01687 [Bifidobacterium dentium ATCC 27678] gi|171278188|gb|EDT45849.1| hypothetical protein BIFDEN_01687 [Bifidobacterium dentium ATCC 27678] Length = 481 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 13/86 (15%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI-- 64 F G GG+ L +EQ + C E + + N+P+ + GDI ++ + Sbjct: 110 FFTGAGGLDLGMEQAGISARLLCENMRE----ARMSIGVNWPDKALVGDITELDAVTVRR 165 Query: 65 -------PDHDVLLAGFPCQPFSQAG 83 + DV+ G PCQ FS AG Sbjct: 166 MAGLDEDTEIDVMFGGPPCQAFSTAG 191 >gi|209525305|ref|ZP_03273847.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209494320|gb|EDZ94633.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 342 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 16/87 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + DLF G GG L F E E+ + TY N DI +T Sbjct: 25 LVVLDLFAGCGGFSLG----FKAAGFETI-GYEMLADAAATYTRNLQ------DICYCQT 73 Query: 62 ----QDIPDH-DVLLAGFPCQPFSQAG 83 QD+ +H DV++ G PCQPFS G Sbjct: 74 LEIGQDLCNHPDVIIGGPPCQPFSVGG 100 >gi|172037464|ref|YP_001803965.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] gi|171698918|gb|ACB51899.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] Length = 430 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 38/121 (31%) Query: 1 MLKITDLFCGIGGIRLDLEQTF--------------------------NHRNVECFFSSE 34 M ++ LF G GG+ L E F N N + F+++ Sbjct: 1 MKRLLSLFSGCGGMDLGFEGNFWIHEDCINETIHPNWIVKKKERWVLLNKTNFDIVFAND 60 Query: 35 INPYSVKTYQANFPNTLI--------FGDIAKIKTQ---DIPDH-DVLLAGFPCQPFSQA 82 I Y+ + + F ++ D+ K+ D P++ D++ GFPCQ FS + Sbjct: 61 IEKYAYNAWMSYFGKKILGKIFHLNSLVDLIKLSETGNFDFPNNIDIITGGFPCQDFSVS 120 Query: 83 G 83 G Sbjct: 121 G 121 >gi|148988375|ref|ZP_01819822.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae SP6-BS73] gi|147926056|gb|EDK77130.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae SP6-BS73] Length = 351 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 14/89 (15%) Query: 4 ITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK- 60 I DLF G GG+ E FN + + +++T+Q N N+ I GDIA I Sbjct: 6 IVDLFSGAGGLSYGFEMAGFN-----VLLGIDNDEKALETFQKNHQNSEILCGDIANISY 60 Query: 61 TQDIP------DHDVLLAGFPCQPFSQAG 83 +DI D+++ G PCQ S +G Sbjct: 61 EEDIKPIIGEQKIDIIVGGPPCQGMSLSG 89 >gi|62946466|ref|YP_227670.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] gi|17134568|dbj|BAB77127.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] Length = 253 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 12/89 (13%) Query: 1 MLKITDLFCGIGGI------RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 M I LF GIGG+ L F V+ F EI+PYS + P T I Sbjct: 1 MKSILSLFSGIGGLCHHGIAAAGLSHKFQ---VKQFV--EISPYSQSRLRHEQPQTPIHS 55 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI D++ G PCQ S AG Sbjct: 56 DITTYHCHR-GQFDIVAGGLPCQGTSNAG 83 >gi|289167785|ref|YP_003446054.1| site-specific DNA methylase [Streptococcus mitis B6] gi|288907352|emb|CBJ22189.1| site-specific DNA methylase [Streptococcus mitis B6] Length = 351 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 14/89 (15%) Query: 4 ITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK- 60 I DLF G GG+ E FN + + +++T+Q N N+ I GDIA I Sbjct: 6 IVDLFSGAGGLSYGFEMAGFN-----VLLGIDNDEKALETFQKNHQNSEILCGDIANISY 60 Query: 61 TQDIP------DHDVLLAGFPCQPFSQAG 83 +DI D+++ G PCQ S +G Sbjct: 61 EEDIKPIIGEQKIDIIVGGPPCQGMSLSG 89 >gi|332023953|gb|EGI64171.1| DNA (cytosine-5)-methyltransferase PliMCI [Acromyrmex echinatior] Length = 1449 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L++ D+F G GG+ + Q E ++ E + Y+ N P T++F Sbjct: 942 LRMLDIFAGCGGLSEGMHQA---GVAESLWAIEKESSAANAYRLNNPKTMVFSEDCNKLL 998 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 GD Q +P D ++L G PCQ FS Sbjct: 999 QRVMDGDRVDNNGQKLPQKGDVELLCGGPPCQGFS 1033 >gi|266620546|ref|ZP_06113481.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM 13479] gi|288867840|gb|EFD00139.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM 13479] Length = 521 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 10/89 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 MLK DLF G GG+ E T V ++E N + KTY N I ++ Sbjct: 1 MLKTIDLFAGAGGLSYGFESTGEFLIVA---AAENNKNARKTYIENHKGRNDIRMIPDVR 57 Query: 61 TQDIPDH-------DVLLAGFPCQPFSQA 82 D DV++ G PCQ FS A Sbjct: 58 GYDFSALASEFDGIDVVIGGPPCQGFSNA 86 >gi|148555450|ref|YP_001263032.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1] gi|148500640|gb|ABQ68894.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1] Length = 400 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 18/96 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55 + + F G GG+ L E + +++V F EIN KT + N P +FG D Sbjct: 72 IPLVSFFTGCGGMDLGFE-SVGYQHVAAF---EINELFCKTLRRNRPEWKVFGPPVHSGD 127 Query: 56 I-------AKIKTQ-DIPDHDVLLAGFPCQPFSQAG 83 + A ++T P V G PCQPFS A Sbjct: 128 VSMFENVAAALRTVIKAPFEGVFAGGPPCQPFSIAA 163 >gi|321469202|gb|EFX80183.1| hypothetical protein DAPPUDRAFT_346987 [Daphnia pulex] Length = 1400 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 18/94 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----IA 57 LK D+F G GG+ L Q+ + +++ E P + + ++ N P+ +F D I Sbjct: 926 LKTLDIFAGCGGLSEGLHQS---GVAKTYWAIECEPTAAQAFRLNNPDAAVFTDDCNTIL 982 Query: 58 KIKT--------QDIPDHD---VLLAGFPCQPFS 80 K+ Q +P D +L G PCQ FS Sbjct: 983 KMAIDGQLEQNGQVLPPKDGVELLCGGPPCQGFS 1016 >gi|153932387|ref|YP_001385110.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|153937602|ref|YP_001388579.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|152928431|gb|ABS33931.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|152933516|gb|ABS39015.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] Length = 350 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 7/90 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY---SVKTYQANF----PNTLIF 53 + ++ +LFCG GG+ + N N Y + TY N P ++I Sbjct: 2 IFQLGELFCGPGGLGYGAKTAEIKNNKYKIVHKWANDYDRDTCDTYIHNICPDDPESVIC 61 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D+ K+ + D L GFPC FS G Sbjct: 62 QDVRKLDIDSLESIDALAFGFPCNDFSVVG 91 >gi|296392544|ref|YP_003657428.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985] gi|296179691|gb|ADG96597.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985] Length = 314 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 10/87 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ DLF G GG+ L E E + + P ++ Y+ NF + + D+ + Sbjct: 11 RLLDLFAGCGGLSLGFESA----GFEVALAVDNWPEALAVYRRNFRHRAVELDLGDVDLA 66 Query: 63 D------IPDHDVLLAGFPCQPFSQAG 83 + D ++ G PCQ FS AG Sbjct: 67 SSALRECAAEVDGIIGGPPCQDFSSAG 93 >gi|281416239|ref|YP_003347588.1| DNA cytosine methyltransferase [Enterococcus phage phiFL3A] gi|270209504|gb|ACZ64045.1| DNA cytosine methyltransferase [Enterococcus phage phiFL3A] gi|270209572|gb|ACZ64112.1| DNA cytosine methyltransferase [Enterococcus phage phiFL3B] Length = 317 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 1 MLKITDLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 M++I +LF GIG R L H++++ E N +V++Y A F + + + + Sbjct: 1 MIQILELFGGIGAPRKALINLGIPHKSIDYV---EWNEKAVRSYNAMFEKEIKYQPQSVV 57 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 PD +L+ G PCQ FS G Sbjct: 58 GWNLKPD--ILVHGSPCQDFSIGG 79 >gi|229490017|ref|ZP_04383870.1| modification methylase DdeI [Rhodococcus erythropolis SK121] gi|229323118|gb|EEN88886.1| modification methylase DdeI [Rhodococcus erythropolis SK121] Length = 431 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 7/57 (12%) Query: 34 EINPYSVKTYQANFPNTLIFGD----IAKIKTQDI---PDHDVLLAGFPCQPFSQAG 83 E+ P + T+ NFP G+ I + + +D+ D DVL G PCQ FS AG Sbjct: 119 EVVPEARATFDRNFPGARCLGEDIRAIDEARVKDLLAQVDIDVLAGGPPCQGFSLAG 175 >gi|226307434|ref|YP_002767394.1| modification methylase [Rhodococcus erythropolis PR4] gi|226186551|dbj|BAH34655.1| putative modification methylase [Rhodococcus erythropolis PR4] Length = 444 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 7/57 (12%) Query: 34 EINPYSVKTYQANFPNTLIFGD----IAKIKTQDI---PDHDVLLAGFPCQPFSQAG 83 E+ P + T+ NFP G+ I + + +D+ D DVL G PCQ FS AG Sbjct: 132 EVVPEARATFDRNFPGARCLGEDIRAIDEARVKDLLAQVDIDVLAGGPPCQGFSLAG 188 >gi|312601558|gb|ADQ90813.1| Cytosine-specific methyltransferase [Mycoplasma hyopneumoniae 168] Length = 406 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 17/91 (18%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIF--GDI--A 57 DLF G G+ L S EI +V+TY NF N +F GDI + Sbjct: 96 DLFSGAAGLSCGLVMA----GFLPLASLEIMKQAVETYAYNFKKRSKNKELFKLGDIRDS 151 Query: 58 KIKTQ---DIPDH--DVLLAGFPCQPFSQAG 83 KIK++ D D++ GFPCQ FS AG Sbjct: 152 KIKSEFYNHFKDQELDLIAGGFPCQGFSMAG 182 >gi|182677759|ref|YP_001831905.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica ATCC 9039] gi|182633642|gb|ACB94416.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica ATCC 9039] Length = 488 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 32/103 (31%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------------I 52 ++FCGIGG L + F+ E F++++ P ++ + NF T + Sbjct: 38 EVFCGIGG----LSRGFHSLGFEPKFANDVWPLALYNFLMNFDATYAATSGTHHGDILGL 93 Query: 53 FGDIAKIKTQDI---------------PDHDVLLAGFPCQPFS 80 G + I DI + DVLL G PCQ FS Sbjct: 94 VGSVEDISISDILPKISSSSGEGSLKVGEIDVLLGGPPCQGFS 136 >gi|116203489|ref|XP_001227555.1| hypothetical protein CHGG_09628 [Chaetomium globosum CBS 148.51] gi|88175756|gb|EAQ83224.1| hypothetical protein CHGG_09628 [Chaetomium globosum CBS 148.51] Length = 2354 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------FGD 55 L+ DLFCG G LE+ VE ++++I ++ TY AN P++ GD Sbjct: 1662 LRGMDLFCGSGNFGRGLEEG---GAVEVKWANDIWDRAIHTYMANSPDSTAKPFLGSVGD 1718 Query: 56 IAKIKTQ-----DIP---DHDVLLAGFPCQPFS 80 + ++ + ++P D D + AG PC FS Sbjct: 1719 LLQLALEGKYADNVPRPGDVDFISAGSPCPGFS 1751 >gi|145631945|ref|ZP_01787699.1| putative 5-methylcytosine methyltransferase [Haemophilus influenzae R3021] gi|145639068|ref|ZP_01794676.1| ABC transporter ATPase component [Haemophilus influenzae PittII] gi|144982396|gb|EDJ89970.1| putative 5-methylcytosine methyltransferase [Haemophilus influenzae R3021] gi|145272040|gb|EDK11949.1| ABC transporter ATPase component [Haemophilus influenzae PittII] Length = 79 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 12/76 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--------TLIF 53 L DLF G GG+ L F++ S E+ P +TY+ NFP+ T + Sbjct: 3 LTYLDLFSGAGGLSLG----FDYAEFRQLLSIELEPVYCETYRVNFPHHRVLQQDLTQLS 58 Query: 54 GDIAKIKTQDIPDHDV 69 + A + DIP+ + Sbjct: 59 NEQASLYRSDIPNRGI 74 >gi|15644682|ref|NP_206852.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori 26695] gi|2313124|gb|AAD07117.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori 26695] Length = 355 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAK--- 58 KI DLFCG GG LE + + + ++ T++ N N + + GDI + Sbjct: 4 KILDLFCGAGGFSAGLECL---EEFDALIGLDCDKQALITFENNHKNAIGVCGDITQTEI 60 Query: 59 ----IKTQDIPDHDVLLAGFPCQPFSQAG 83 IK + ++++ G PCQ FS G Sbjct: 61 KEKVIKLAKKLEINMIIGGPPCQGFSNKG 89 >gi|238018550|ref|ZP_04598976.1| hypothetical protein VEIDISOL_00377 [Veillonella dispar ATCC 17748] gi|237865021|gb|EEP66311.1| hypothetical protein VEIDISOL_00377 [Veillonella dispar ATCC 17748] Length = 452 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 14/94 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++KI +F G+GG + LE + + + +S++ P S KT A F D+ I Sbjct: 22 VMKIFSMFDGVGGFIVGLENS-SKEVFQTLYSNQYEP-SRKTQDAYEVGLYRFPDMEHIP 79 Query: 61 TQD--IPDH----------DVLLAGFPCQPFSQA 82 T IP+ D+++ GFPCQ +S A Sbjct: 80 TDVALIPNEKFGEMKSNGVDMIVGGFPCQDYSVA 113 >gi|196048067|ref|ZP_03115245.1| DNA-cytosine methyltransferase [Bacillus cereus 03BB108] gi|196021323|gb|EDX60052.1| DNA-cytosine methyltransferase [Bacillus cereus 03BB108] Length = 427 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 6/53 (11%) Query: 34 EINPYSVKTYQANFPNTLIFGDIAKIKTQD----IPDHD--VLLAGFPCQPFS 80 EIN + KTY+ N P+T+++ K T D I ++ +LL G PCQ FS Sbjct: 34 EINSDACKTYKVNHPDTIVWNRDIKTVTGDEILSITKNNPIILLGGSPCQSFS 86 >gi|241832196|ref|XP_002414890.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis] gi|215509102|gb|EEC18555.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis] Length = 361 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L++ +L+ GIGG+ + ++N + TY NFP T L+ ++ + Sbjct: 19 LRVLELYSGIGGMHFACPPD----KTRVVAAVDVNTTANATYAFNFPETRLLQRNVQSLT 74 Query: 61 TQ--DIPDHDVLLAGFPCQPFSQAG 83 + D DVL PCQPF++ G Sbjct: 75 ARELDALRPDVLTMSPPCQPFTRQG 99 >gi|127453|sp|P25267|MTG1_HERAU RecName: Full=Modification methylase HgiGI; Short=M.HgiGI; AltName: Full=Cytosine-specific methyltransferase HgiGI gi|43475|emb|CAA38947.1| methyltransferase [Herpetosiphon aurantiacus] Length = 126 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF G GG+ L F E + + ++ TYQ NF + + D+A++ Sbjct: 1 MKTIDLFAGCGGMSLG----FMQAGFEIVAAVDNWRPAITTYQQNFIHPIHELDLAEVDE 56 Query: 62 Q----DIPDHDVLLAGFPCQPFSQAG 83 ++++ G PCQ FS AG Sbjct: 57 AISLIKTYSPELIIGGPPCQDFSSAG 82 >gi|269129048|ref|YP_003302418.1| DNA-cytosine methyltransferase [Thermomonospora curvata DSM 43183] gi|268314006|gb|ACZ00381.1| DNA-cytosine methyltransferase [Thermomonospora curvata DSM 43183] Length = 418 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 L + ++ G GG L LE F H + E++ + T + N P I GD A + Sbjct: 4 LNVVEICAGAGGQSLGLELAGFKHA-----LAVELDANACNTLRLNRPEWKIAEGDAASL 58 Query: 60 KTQDIPDH---DVLLAGFPCQPFSQAG 83 + D+ D+L G PC PF+ AG Sbjct: 59 DVWNPADYQEIDLLAGGVPCPPFTIAG 85 >gi|254039141|ref|ZP_04873191.1| DNA-cytosine methyltransferase [Escherichia sp. 1_1_43] gi|226838577|gb|EEH70606.1| DNA-cytosine methyltransferase [Escherichia sp. 1_1_43] Length = 349 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+K+ DLFCG GG+ L+++ + +I+ Y+ N + + + I+ Sbjct: 1 MIKVVDLFCGAGGLTHGLQKS----GLNVVAGYDIDAACRFAYETNNKSLFVQKSVTDIE 56 Query: 61 TQDIPDH------DVLLAGFPCQPFS 80 ++ + VL PCQPFS Sbjct: 57 DGELVKYFEGAKVRVLAGCAPCQPFS 82 >gi|225019628|ref|ZP_03708820.1| hypothetical protein CLOSTMETH_03581 [Clostridium methylpentosum DSM 5476] gi|224947595|gb|EEG28804.1| hypothetical protein CLOSTMETH_03581 [Clostridium methylpentosum DSM 5476] Length = 390 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 8/87 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M KI DLF G GG+ + F + E + Y+ NF + + D++ ++ Sbjct: 1 MKKIVDLFAGCGGLSMG----FQDAGFNIVGAFEFWDIAADCYEKNFEHPVYRMDLSDVE 56 Query: 61 TQ----DIPDHDVLLAGFPCQPFSQAG 83 + ++++ G PCQ FS AG Sbjct: 57 KSVEKIKLLKPEIIIGGPPCQDFSHAG 83 >gi|251773224|gb|EES53775.1| Site-specific DNA methylase-like protein [Leptospirillum ferrodiazotrophum] Length = 154 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 ++ G GG L LEQ F+H + E++ ++ + + N P +I G++ K Sbjct: 6 EICAGAGGQALGLEQAGFDHSAL-----VELDHHACASLRLNRPGWNVIEGNLQSFKGTP 60 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D+L G PC PFS+ G Sbjct: 61 FKGIDLLAGGVPCPPFSKDG 80 >gi|323139578|ref|ZP_08074623.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242] gi|322395197|gb|EFX97753.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242] Length = 381 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 29 CFFSSEINPYSVKTYQANFPN--TLIFGDIAKIKTQDIPD-HDVLLAGFPCQPFS 80 C F+++ + +YQAN+ L+ GD+ K+ +P D++ FPCQ S Sbjct: 24 CQFANDFDHKKALSYQANWGTGGELLVGDVRKVTASQLPGCADLIWGSFPCQDLS 78 >gi|29832079|ref|NP_826713.1| type II restriction-modification system DNA cytosine-specific methylase [Streptomyces avermitilis MA-4680] gi|29609197|dbj|BAC73248.1| putative type II restriction-modification system DNA cytosine-specific methylase [Streptomyces avermitilis MA-4680] Length = 515 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L +TDLFCG GG V+ F++ ++ ++QAN P+ DI++++ Sbjct: 49 LSLTDLFCGAGGSSTGAAMV---PGVQVAFAANHARDAIDSHQANHPDADHDLADISEVE 105 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 P D+L A C S A Sbjct: 106 PTRYPRTDLLWASPACTAHSLA 127 >gi|315029938|gb|EFT41870.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX4000] Length = 317 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 1 MLKITDLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 M++I +LF GIG R L H++++ E N +V++Y A F + + + + Sbjct: 1 MIQILELFGGIGAPRKALINLGIPHKSIDYV---EWNEKAVRSYNAMFEKEIKYQPQSVV 57 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 PD +L+ G PCQ FS G Sbjct: 58 GWNLKPD--ILVHGSPCQDFSIGG 79 >gi|302873652|ref|YP_003842285.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|307686624|ref|ZP_07629070.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|302576509|gb|ADL50521.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] Length = 445 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 29/103 (28%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF---------GDI 56 DLFCG GG+ L Q H FSS+IN +TY + GD+ Sbjct: 6 DLFCGAGGMSEGLIQAGFH----ILFSSDINEDVQRTYMNRHEQLGLLQGVNTHYHRGDV 61 Query: 57 AKIKTQ---------------DIP-DHDVLLAGFPCQPFSQAG 83 ++ + +P D D + G PCQ FS+AG Sbjct: 62 RELTGEFIRNSIQNLAIFAEGSVPEDIDAIFGGPPCQGFSRAG 104 >gi|310828705|ref|YP_003961062.1| hypothetical protein ELI_3130 [Eubacterium limosum KIST612] gi|308740439|gb|ADO38099.1| Phage-related protein [Eubacterium limosum KIST612] Length = 262 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 10/83 (12%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGGI L E +C F+ + K + ++P+ + D+ + + Sbjct: 11 LFTGIGGIDLAAEWAGFETVGQCEFAD----FPTKVLKKHWPDVPRWRDVKDVTRESFEQ 66 Query: 67 H------DVLLAGFPCQPFSQAG 83 D++ GFPCQP S G Sbjct: 67 WTGLQTVDLISGGFPCQPHSVIG 89 >gi|297570127|ref|YP_003691471.1| DNA-cytosine methyltransferase [Desulfurivibrio alkaliphilus AHT2] gi|296926042|gb|ADH86852.1| DNA-cytosine methyltransferase [Desulfurivibrio alkaliphilus AHT2] Length = 363 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 10/84 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ DLFCG+G L + ++ +++ ++ N + D+ K+ Sbjct: 18 EVVDLFCGVGA----LSHGLRNAGLKILAGYDVDARCKYAFETNNSASFFSRDVGKLTAA 73 Query: 63 DIPDH------DVLLAGFPCQPFS 80 ++ H VL PCQPFS Sbjct: 74 ELKSHFSGNVPSVLAGCAPCQPFS 97 >gi|239812977|ref|YP_002941924.1| DNA-cytosine methyltransferase [Geobacillus sp. WCH70] gi|239809042|gb|ACS26105.1| DNA-cytosine methyltransferase [Geobacillus sp. WCH70] Length = 370 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 16/94 (17%) Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK 58 M F G GG+ L +++ FN S EI +T + NF ++ GDI + Sbjct: 1 MANAISFFAGAGGLDLGIKRAGFN-----ILLSVEIEETYCQTLRQNFEGLNVVCGDIME 55 Query: 59 IKTQDI------PDH---DVLLAGFPCQPFSQAG 83 + + +H D+++ G PCQ FS AG Sbjct: 56 YSRERVYQEAGLAEHEEVDLMIGGSPCQSFSTAG 89 >gi|237742048|ref|ZP_04572529.1| site-specific DNA-methyltransferase [Fusobacterium sp. 4_1_13] gi|229429696|gb|EEO39908.1| site-specific DNA-methyltransferase [Fusobacterium sp. 4_1_13] Length = 440 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 32/104 (30%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ------------------ANF 47 DLFCG GG+ + Q H FS+EI+ + +TY+ A+ Sbjct: 14 DLFCGAGGMSEGILQAGFH----IIFSNEISKDASETYRKRHEQLGLEQGKNTWLEVADI 69 Query: 48 PNTLIFGDIAKIKTQDIPDH--------DVLLAGFPCQPFSQAG 83 N I G K K ++ D D + G PCQ FS+AG Sbjct: 70 KN--ITGTYIKKKISELKDFKENKNIEIDAIFGGPPCQGFSRAG 111 >gi|162461489|ref|NP_001105173.1| DNA methyl transferase4 [Zea mays] gi|13936240|gb|AAK40306.1| DNA methyltransferase ZMET4 [Zea mays] gi|194697288|gb|ACF82728.1| unknown [Zea mays] Length = 357 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 3 KITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ + + GIGG+R L + VE F +IN + Y+ NF + G+I + Sbjct: 8 RVLEFYSGIGGLRYSLMASGVRAEVVEAF---DINDVANDVYEHNFGHRPCQGNIQTLTA 64 Query: 62 QDIPDHD--VLLAGFPCQPFSQAG 83 D+ + L PCQP+++ G Sbjct: 65 SDLDKYKAHAWLLSPPCQPYTRQG 88 >gi|237728463|ref|ZP_04558944.1| DNA-cytosine methyltransferase [Citrobacter sp. 30_2] gi|226909941|gb|EEH95859.1| DNA-cytosine methyltransferase [Citrobacter sp. 30_2] Length = 318 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 ++ G GG L LE F+H + E+ P + T + N P +I D+ + + Sbjct: 8 EMCAGAGGQALGLEMAGFDHAAL-----VELEPAACATLRLNRPAWNVIEDDLRRFDGRP 62 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D++ G PC PFS+AG Sbjct: 63 YQGIDLVAGGVPCPPFSKAG 82 >gi|163761361|ref|ZP_02168435.1| C-5 cytosine-specific DNA methylase family protein [Hoeflea phototrophica DFL-43] gi|162281356|gb|EDQ31653.1| C-5 cytosine-specific DNA methylase family protein [Hoeflea phototrophica DFL-43] Length = 376 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 18/93 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------PNTLIFG- 54 LK+ DLF G GG L + E F+ E + + T++ N N +++ Sbjct: 3 LKVVDLFAGAGGFSLAAVRA----GCEIVFAVEFDKNAATTFRNNIGADHRSKNVVVYNR 58 Query: 55 DIAKIKTQDIP-------DHDVLLAGFPCQPFS 80 DI + + D D+LL G PCQ FS Sbjct: 59 DITSLSASALAKKHFPASDCDLLLGGPPCQGFS 91 >gi|121582558|ref|YP_974087.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42] gi|120608614|gb|ABM44352.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42] Length = 318 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 ++ G GG L LE F+H + E+ P + T + N P +I D+ + + Sbjct: 8 EMCAGAGGQALGLEMAGFDHAAL-----VELEPAACATLRLNRPAWNVIEDDLRRFDGRP 62 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D++ G PC PFS+AG Sbjct: 63 YQGIDLVAGGVPCPPFSKAG 82 >gi|316934943|ref|YP_004109925.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1] gi|315602657|gb|ADU45192.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1] Length = 495 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 23/100 (23%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTL----IF 53 ++ DLF G GG+ L F+ E S EI+ + +++ NF P + + Sbjct: 23 RVLDLFSGCGGLSLG----FHSAGYEIAASVEIDELAARSHAINFYKGQAPELIERQAVA 78 Query: 54 GDIAKIKTQDIPDH----------DVLLAGFPCQPFSQAG 83 DI KI D+ D+++ G PCQ +++ G Sbjct: 79 RDITKIDPDDLTSDLGLGPSKLAFDLIVGGPPCQAYARVG 118 >gi|2522459|gb|AAC45757.1| M.BssHII methylase [Geobacillus stearothermophilus] Length = 375 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 12/89 (13%) Query: 7 LFCGIGGIRLDLEQ-TFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKIKTQD 63 LF G GG+ + EQ T+ +E + + + T + + +++ GDI++I+ Sbjct: 164 LFSGAGGLDIGAEQATYKSMKIETLVTLDNWKDACDTLRGFYQGRTSVLQGDISEIQDPK 223 Query: 64 IPDH---------DVLLAGFPCQPFSQAG 83 + H D++ G PCQ FSQAG Sbjct: 224 LLWHQESQHDQIPDIVFGGPPCQAFSQAG 252 >gi|317401187|gb|EFV81833.1| hypothetical protein HMPREF0005_01193 [Achromobacter xylosoxidans C54] Length = 571 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 13/90 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--FGDIAKI 59 L DLF G GG L E + C + + N +++T++AN + D+ K Sbjct: 41 LTFLDLFSGCGGFSLGFEAA----GLVCKAAVDSNEAAIETFKANHTKGALGLVRDLTKF 96 Query: 60 KTQDIPDH-------DVLLAGFPCQPFSQA 82 +D+ +V++ G PCQ FS+A Sbjct: 97 SPKDLDKLLGGSVRINVIVGGPPCQGFSKA 126 >gi|152982884|ref|YP_001351698.1| site-specific DNA methylase [Janthinobacterium sp. Marseille] gi|151282961|gb|ABR91371.1| Site-specific DNA methylase [Janthinobacterium sp. Marseille] Length = 425 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 8/81 (9%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKIKTQD 63 + F G G R L + +N C F+++ + + Y+ N+ L+ D+ KI T+ Sbjct: 50 EFFAGGGMARAGLGERWN-----CQFANDNSAMKGQVYRKNWHGGPELVIEDVNKITTRH 104 Query: 64 IPDH-DVLLAGFPCQPFSQAG 83 + D++ A FPCQ S AG Sbjct: 105 LSGTPDLIWASFPCQDLSLAG 125 >gi|79835466|gb|ABB52093.1| Mod [Arthrospira platensis] gi|291569838|dbj|BAI92110.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39] Length = 345 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 16/87 (18%) Query: 2 LKITDLFCGIGGIRLDLE----QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA 57 L + DLF G GG L + QT + + Y+ + TL G Sbjct: 25 LVVLDLFAGCGGFSLGFKAAGFQTIGYE----MLADAAATYTRNLQDPCYCQTLEIG--- 77 Query: 58 KIKTQDIPDH-DVLLAGFPCQPFSQAG 83 QD+ +H DV++ G PCQPFS G Sbjct: 78 ----QDLCNHPDVIIGGPPCQPFSVGG 100 >gi|319776379|ref|YP_004138867.1| putative 5-methylcytosine methyltransferase [Haemophilus influenzae F3047] gi|329123543|ref|ZP_08252106.1| modification methylase HphIA [Haemophilus aegyptius ATCC 11116] gi|317450970|emb|CBY87199.1| Putative 5-methylcytosine methyltransferase [Haemophilus influenzae F3047] gi|327470359|gb|EGF15817.1| modification methylase HphIA [Haemophilus aegyptius ATCC 11116] Length = 79 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 12/76 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--------TLIF 53 L DLF G GG+ L F++ S E+ P +TY+ NFP+ T + Sbjct: 3 LTYLDLFSGAGGLSLG----FDYAGFRQLLSIELEPVYCETYRVNFPHHRVLQQDLTQLS 58 Query: 54 GDIAKIKTQDIPDHDV 69 + A + DIP+ + Sbjct: 59 NEQASLYHSDIPNRGI 74 >gi|313683546|ref|YP_004061284.1| DNA-cytosine methyltransferase [Sulfuricurvum kujiense DSM 16994] gi|313156406|gb|ADR35084.1| DNA-cytosine methyltransferase [Sulfuricurvum kujiense DSM 16994] Length = 332 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 15/92 (16%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFP------NTLIFG 54 L +L G GG L L F HR EI Y+ T + N +I G Sbjct: 5 LTSIELCAGAGGQALGLHLAGFKHR-----LLIEIENYACNTLRMNNKLHALGWEEIIEG 59 Query: 55 DIAKIKTQDIPDH---DVLLAGFPCQPFSQAG 83 D+ + D+ ++ D++ G PC PFS+AG Sbjct: 60 DLLEFAKSDLSNYSNIDLVAGGVPCPPFSKAG 91 >gi|295114912|emb|CBL35759.1| Site-specific DNA methylase [butyrate-producing bacterium SM4/1] Length = 217 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 20/95 (21%) Query: 2 LKITDLFCGIGGIRLDLEQ---TFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDI- 56 +++ DLFCG GG+ L + + ++R V ++++P +++ Y+ NF P+ +I I Sbjct: 65 IRVVDLFCGCGGMSLGIAEACRALDYRFVP-VLGADMDPVALQVYKENFKPHHVISEPIE 123 Query: 57 --------AKIKTQD------IPDHDVLLAGFPCQ 77 A+I + + + D+L+ G PCQ Sbjct: 124 NQIDSEIGAEISEAEKSFINLVGEVDILIGGPPCQ 158 >gi|311221492|gb|ADP76553.1| DNA methyltransferase [Helicobacter pylori] Length = 587 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAK--- 58 KI DLFCG GG LE + + + ++ T++ N N + + GDI + Sbjct: 4 KILDLFCGAGGFSAGLECL---EEFDALIGLDCDKQALITFENNHKNAIGVCGDITQTEI 60 Query: 59 ----IKTQDIPDHDVLLAGFPCQPFSQAG 83 IK + ++++ G PCQ FS G Sbjct: 61 KEKVIKLAKKLEINMIIGGPPCQGFSNKG 89 >gi|298492225|ref|YP_003722402.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708] gi|298234143|gb|ADI65279.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708] Length = 434 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 19/90 (21%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF------------ 53 DLF G GG+ L EQ + S E++P ++ NFP + Sbjct: 10 DLFAGAGGMTLGFEQA----GFDVLVSVELDPIHCAIHKFNFPFWKVLCKSVEETTGSEI 65 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + + I Q+I DV+ G PCQ FS G Sbjct: 66 RNSSDIGNQEI---DVVFGGPPCQGFSLIG 92 >gi|158335733|ref|YP_001516905.1| DNA-cytosine methyltransferase [Acaryochloris marina MBIC11017] gi|158305974|gb|ABW27591.1| DNA-cytosine methyltransferase [Acaryochloris marina MBIC11017] Length = 397 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L +LF G GG+ LE+ V+ E N + T N+ L+ DI K Sbjct: 4 LSCLELFTGAGGLAKGLEKA----GVQHTAFVEWNKDACITLANNYSAQLVHNVDIRTFK 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D++ G PCQPFS G Sbjct: 60 FSQFGHVDIVSGGPPCQPFSMGG 82 >gi|226305778|ref|YP_002765738.1| hypothetical protein RER_22910 [Rhodococcus erythropolis PR4] gi|226184895|dbj|BAH32999.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length = 513 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M+ +TDLFCG GG Q V ++ +++T+ N P T D++++ Sbjct: 1 MITMTDLFCGAGGSSTGAVQV---PGVSVRMAANHWDLAIETHNTNHPTTDHACADLSQV 57 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 + P D+L A C SQA Sbjct: 58 DPRLFPRTDLLWASPECTNHSQA 80 >gi|70734372|ref|YP_260119.1| DNA-cytosine methyltransferase [Pseudomonas fluorescens Pf-5] gi|68348671|gb|AAY96277.1| DNA-cytosine methyltransferase [Pseudomonas fluorescens Pf-5] Length = 394 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60 L+ + F G G R L + +C F+++++ TY N+ + DI ++ Sbjct: 5 LRFFEFFAGGGMARAGLGNQW-----QCLFANDMDRIKASTYIQNWGKDHFDSRDIREVN 59 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 ++D+ + D+ A FPCQ S AG Sbjct: 60 SEDLERNGDLAWASFPCQDLSVAG 83 >gi|126740127|ref|ZP_01755817.1| DNA modification methylase M.NGOI [Roseobacter sp. SK209-2-6] gi|126718946|gb|EBA15658.1| DNA modification methylase M.NGOI [Roseobacter sp. SK209-2-6] Length = 319 Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK 58 ML +L G GG L LE+ F+H + EI+ + T + N P+ ++ D+ Sbjct: 1 MLTSVELCAGAGGQALGLEKAGFDHTAL-----VEIDKHCCATLRHNRPSWNVLEEDVRN 55 Query: 59 IK--TQDIPDHDVLLAGFPCQPFSQAG 83 K + D+L G PC PFS AG Sbjct: 56 FKEVAGNYRGIDLLAGGLPCPPFSVAG 82 >gi|17225548|gb|AAL37469.1|AF328924_2 cytosine-specific DNA methyltransferase [Helicobacter pylori] Length = 107 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 11/89 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAK--I 59 KI DLFCG GG LE + + + + ++ T++ N N + + GDI + I Sbjct: 4 KILDLFCGAGGFSAGLEYL---KEFDALIGLDCDKQALITFENNHKNAIGVCGDITQTEI 60 Query: 60 KTQDIP-----DHDVLLAGFPCQPFSQAG 83 K + I + ++++ G PCQ F G Sbjct: 61 KEKVIELAKKLEINMIIGGPPCQGFYNKG 89 >gi|221108933|ref|XP_002155714.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase 1, partial [Hydra magnipapillata] Length = 1138 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54 L+ D+F G GG+ L+Q V ++ E P + + Y+ N P+ ++F Sbjct: 643 LRTLDIFAGCGGLSEGLDQV---GVVNSCWAIEFEPSAAQAYRLNNPSAIVFNQDCNNVL 699 Query: 55 -DIAKIKTQD-----IP---DHDVLLAGFPCQPFS 80 I + K +D +P + D+L G PCQ FS Sbjct: 700 KQIMEGKEKDDLGQRLPRRGEVDLLCGGPPCQGFS 734 >gi|323139132|ref|ZP_08074189.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242] gi|322395603|gb|EFX98147.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242] Length = 421 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 29 CFFSSEINPYSVKTYQANFPN--TLIFGDIAKIKTQDIPD-HDVLLAGFPCQPFS 80 C F+++ + +YQAN+ L+ GD+ K+ +P D++ FPCQ S Sbjct: 64 CLFANDFDHKKGLSYQANWGTGGELLVGDVRKVTPSQLPGCADLVWGSFPCQDLS 118 >gi|317509458|ref|ZP_07967076.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] gi|316252287|gb|EFV11739.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] Length = 321 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 10/87 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI---FGDIAKI 59 ++ DLF G GG+ L E E + + P ++ Y+ NF + I GD+ Sbjct: 11 RLLDLFSGCGGLSLGFEAA----GFEVAAAVDNWPEALAVYRRNFRHPAIELDLGDVDLA 66 Query: 60 K---TQDIPDHDVLLAGFPCQPFSQAG 83 K ++ D ++ G PCQ FS AG Sbjct: 67 KAVLSEWTAGVDGIIGGPPCQDFSSAG 93 >gi|311977244|gb|ADQ20500.1| M1.BfuAI [Lysinibacillus fusiformis] Length = 357 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 7/62 (11%) Query: 29 CFFSSEINPYSVKTYQANFPNTLIFGD----IAKIKTQDIPDH---DVLLAGFPCQPFSQ 81 FS EI+ +V+T+ NFP+ +F D + K K ++ + D+++ G PCQ FS Sbjct: 26 VLFSVEIDKAAVRTHLENFPDIPVFDDDIRNLTKEKMVELTKNSEIDLVVGGPPCQGFSV 85 Query: 82 AG 83 G Sbjct: 86 FG 87 >gi|108805045|ref|YP_644982.1| DNA (cytosine-5-)-methyltransferase [Rubrobacter xylanophilus DSM 9941] gi|108766288|gb|ABG05170.1| DNA (cytosine-5-)-methyltransferase [Rubrobacter xylanophilus DSM 9941] Length = 405 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 21/93 (22%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI--------- 56 DLF G GG+ L F + +++++ ++ TY+ N + ++ GDI Sbjct: 154 DLFSGAGGLSLG----FQWAGWQPVVANDVDEAALLTYRDNIHDVIVLGDIREHHVIDAI 209 Query: 57 ------AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 A+ + ++P +L G PCQ FS AG Sbjct: 210 IQKCEEARDASPNMP--FFVLGGPPCQGFSTAG 240 >gi|254671709|emb|CBA09495.1| modification methylase [Neisseria meningitidis alpha153] Length = 351 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 13/88 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D FCG GG+ ++ ++ + P +TY+AN I D+ +++ Sbjct: 6 LKAVDFFCGGGGMSYGMQSA----GIQVLAGIDYEPSCKETYEANINAKFIQADVFELQP 61 Query: 62 QDIP--------DHDVLLAG-FPCQPFS 80 + + D D++L G PCQ +S Sbjct: 62 ETLEKELGLKKNDDDLILIGCSPCQYWS 89 >gi|115638547|ref|XP_787412.2| PREDICTED: similar to DNA methyltransferase 3A [Strongylocentrotus purpuratus] gi|115931470|ref|XP_001187128.1| PREDICTED: similar to DNA methyltransferase 3A [Strongylocentrotus purpuratus] Length = 1447 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 8/84 (9%) Query: 2 LKITDLFCGIG-GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 +++ LF G+G G+ + E F+ VEC+++SE++ ++ + GD+ KI Sbjct: 1163 IRVLSLFDGLGTGMLVLRELGFD---VECYYASEVSEEAITVAAVRLKGQIQQIGDVQKI 1219 Query: 60 KTQDIPD---HDVLLAGFPCQPFS 80 +++ D+L+ G PC S Sbjct: 1220 TPKELKSWGPFDILIGGSPCNDLS 1243 >gi|254804174|ref|YP_003082395.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|304388624|ref|ZP_07370688.1| possible DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|254667716|emb|CBA03597.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|304337441|gb|EFM03611.1| possible DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] Length = 351 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 13/88 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D FCG GG+ ++ ++ + P +TY+AN I D+ +++ Sbjct: 6 LKAVDFFCGGGGMSYGMQSA----GIQVLAGIDYEPSCKETYEANINAKFIQADVFELQP 61 Query: 62 QDIP--------DHDVLLAG-FPCQPFS 80 + + D D++L G PCQ +S Sbjct: 62 ETLEKELGLKKNDDDLILIGCSPCQYWS 89 >gi|157412795|ref|YP_001483661.1| site-specific DNA methylase [Prochlorococcus marinus str. MIT 9215] gi|157387370|gb|ABV50075.1| Site-specific DNA methylase [Prochlorococcus marinus str. MIT 9215] Length = 698 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 14/85 (16%) Query: 6 DLFCGIGGIRLDLEQTFNHR-NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT-QD 63 DLF G GG+ L L HR N + + +I S+ T++ +F D++K K + Sbjct: 56 DLFSGAGGLSLGL-----HRANFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINE 110 Query: 64 IPDH-------DVLLAGFPCQPFSQ 81 I + ++ G PCQPFS+ Sbjct: 111 ISEQLNKCGEISLIAGGPPCQPFSR 135 >gi|123967970|ref|YP_001008828.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. AS9601] gi|123198080|gb|ABM69721.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. AS9601] Length = 698 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 14/85 (16%) Query: 6 DLFCGIGGIRLDLEQTFNHR-NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT-QD 63 DLF G GG+ L L HR N + + +I S+ T++ +F D++K K + Sbjct: 56 DLFSGAGGLSLGL-----HRANFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINE 110 Query: 64 IPDH-------DVLLAGFPCQPFSQ 81 I + ++ G PCQPFS+ Sbjct: 111 ISEQLNKCGEISLIAGGPPCQPFSR 135 >gi|91069833|gb|ABE10765.1| C-5 cytosine-specific DNA methylase [uncultured Prochlorococcus marinus clone ASNC1092] Length = 686 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 14/85 (16%) Query: 6 DLFCGIGGIRLDLEQTFNHR-NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT-QD 63 DLF G GG+ L L HR N + + +I S+ T++ +F D++K K + Sbjct: 56 DLFSGAGGLSLGL-----HRANFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINE 110 Query: 64 IPDH-------DVLLAGFPCQPFSQ 81 I + ++ G PCQPFS+ Sbjct: 111 ISEQLNKCGEISLIAGGPPCQPFSR 135 >gi|78778763|ref|YP_396875.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT 9312] gi|78712262|gb|ABB49439.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT 9312] Length = 686 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 14/85 (16%) Query: 6 DLFCGIGGIRLDLEQTFNHR-NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT-QD 63 DLF G GG+ L L HR N + + +I S+ T++ +F D++K K + Sbjct: 56 DLFSGAGGLSLGL-----HRANFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINE 110 Query: 64 IPDH-------DVLLAGFPCQPFSQ 81 I + ++ G PCQPFS+ Sbjct: 111 ISEQLNKCGEISLIAGGPPCQPFSR 135 >gi|121635670|ref|YP_975915.1| modification methylase (cytosine-specific DNA methylase) [Neisseria meningitidis FAM18] gi|218767413|ref|YP_002341925.1| modification methylase (cytosine-specific DNA methylase) [Neisseria meningitidis Z2491] gi|120867376|emb|CAM11148.1| modification methylase (cytosine-specific DNA methylase) [Neisseria meningitidis FAM18] gi|121051421|emb|CAM07714.1| modification methylase (cytosine-specific DNA methylase) [Neisseria meningitidis Z2491] gi|261393340|emb|CAX50974.1| putative cytosine-specific methyltransferase [Neisseria meningitidis 8013] gi|319409676|emb|CBY89977.1| putative cytosine-specific methyltransferase [Neisseria meningitidis WUE 2594] gi|325131421|gb|EGC54130.1| modification methylase [Neisseria meningitidis M6190] Length = 351 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 13/88 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D FCG GG+ ++ ++ + P +TY+AN I D+ +++ Sbjct: 6 LKAVDFFCGGGGMSYGMQSA----GIQVLAGIDYEPSCKETYEANINAKFIQADVFELQP 61 Query: 62 QDIP--------DHDVLLAG-FPCQPFS 80 + + D D++L G PCQ +S Sbjct: 62 ETLEKELGLKKNDDDLILIGCSPCQYWS 89 >gi|283956744|ref|ZP_06374220.1| hypothetical protein C1336_000290019 [Campylobacter jejuni subsp. jejuni 1336] gi|283791719|gb|EFC30512.1| hypothetical protein C1336_000290019 [Campylobacter jejuni subsp. jejuni 1336] Length = 330 Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 14/87 (16%) Query: 6 DLFCGIGGIRLDLEQT--FNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFGDI 56 DLF G GG L ++ FN S + NP +Y+ NF + L F D Sbjct: 8 DLFSGAGGFSLGFLKSGAFN-----ILLSIDNNPKLSISYEKNFDFIKHINRDILSFSDK 62 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 K Q + +V++ G PCQ FS AG Sbjct: 63 DIQKLQQKYNFEVIIGGPPCQGFSLAG 89 >gi|295687890|ref|YP_003591583.1| DNA-cytosine methyltransferase [Caulobacter segnis ATCC 21756] gi|295429793|gb|ADG08965.1| DNA-cytosine methyltransferase [Caulobacter segnis ATCC 21756] Length = 379 Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI----FGDIA 57 +K+ +LFCG GG + + E + +++ +Y+ NFP T + G++ Sbjct: 1 MKLVELFCGTGG----FSRGAHAAGFEVAVAYDLDKTLTSSYEINFPQTKLRHEDVGELT 56 Query: 58 --KIKTQDIPDHDVLLAGFPCQPFSQAG 83 KI+ + + L G PCQ FS G Sbjct: 57 GDKIRAEVGDEVFGLFGGPPCQGFSDIG 84 >gi|27733906|ref|NP_775697.1| putative C5-methyltransferase [Leuconostoc citreum] gi|27552370|emb|CAD38156.1| putative C5-methyltransferase [Leuconostoc citreum] Length = 403 Score = 34.3 bits (77), Expect = 5.6, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 23/43 (53%) Query: 41 KTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +TY F ++ D K P++D+++ GFPC FS AG Sbjct: 112 QTYTDMFSENIVKHDKDIRKVAIFPNNDIMIGGFPCPGFSSAG 154 >gi|71903439|ref|YP_280242.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS6180] gi|94988546|ref|YP_596647.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS9429] gi|94992369|ref|YP_600468.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS2096] gi|71802534|gb|AAX71887.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS6180] gi|94542054|gb|ABF32103.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS9429] gi|94545877|gb|ABF35924.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS2096] Length = 110 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 ++ DLF GIGG RL L + EC EI+ ++ ++Y+A + + F DI ++ Sbjct: 4 MQFLDLFAGIGGFRLGLINQCH----ECIGFCEIDKFARQSYKAIYETEGEIEFHDIRQV 59 Query: 60 KTQDIPDH----DVLLAGFP 75 QD D++ GF Sbjct: 60 TDQDFRQLRGQVDIICGGFS 79 >gi|169834659|ref|YP_001693426.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] gi|169123207|gb|ACA47042.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] Length = 490 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Query: 41 KTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +TY N + ++ DI+K+ + +IP VL+ G PCQ FS + Sbjct: 210 ETYGKNLGSHILHEDISKV-SNNIPHATVLIGGSPCQGFSNSN 251 >gi|238759658|ref|ZP_04620818.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236] gi|238702086|gb|EEP94643.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236] Length = 369 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLFCG GG+ L ++ + +I Y+ N T I D+ + Sbjct: 25 IKAVDLFCGAGGLTHGLIKS----GINVVAGYDIEESCRFAYEHNNNATFINQDVTSLSG 80 Query: 62 QDIPDH-----DVLLAG-FPCQPFS 80 ++ H LLAG PCQPFS Sbjct: 81 DEVLRHLKNADYTLLAGCAPCQPFS 105 >gi|291535263|emb|CBL08375.1| DNA-methyltransferase (dcm) [Roseburia intestinalis M50/1] Length = 350 Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 17/93 (18%) Query: 3 KITDLFCGIGGIRL--------DLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNT 50 ++ +LFCG GGI + + + H+ ++++ + + +TY+ N P T Sbjct: 4 RLGELFCGPGGIAWGATHADIGNSDYSIVHQ-----WANDYDASTCETYRRNICPDAPQT 58 Query: 51 LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + DI K + D L GFPC +S G Sbjct: 59 VYHEDIRKFDMSKLAPIDALAFGFPCNDYSVVG 91 >gi|260580130|ref|ZP_05847960.1| site-specific DNA-methyltransferase (cytosine-specific) [Haemophilus influenzae RdAW] gi|260093414|gb|EEW77347.1| site-specific DNA-methyltransferase (cytosine-specific) [Haemophilus influenzae RdAW] Length = 304 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 +K DLF G GG+ L E E + E +++ Y+ NF + + D+ K Sbjct: 1 MKCVDLFSGCGGLSLGFELA----GFEICAAFENWEKAIEIYKNNFSHPIYNIDLRNEKE 56 Query: 61 -TQDIPDH--DVLLAGFPCQPFSQAG 83 + I + D+++ G PCQ FS AG Sbjct: 57 AVEKIKKYSPDLIMGGPPCQDFSSAG 82 >gi|16272974|ref|NP_439200.1| modification methylase [Haemophilus influenzae Rd KW20] gi|1171050|sp|P45000|MTH5_HAEIN RecName: Full=Modification methylase HindV; Short=M.HindV; AltName: Full=Cytosine-specific methyltransferase HindV gi|1574073|gb|AAC22700.1| modification methylase [Haemophilus influenzae Rd KW20] Length = 304 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 +K DLF G GG+ L E E + E +++ Y+ NF + + D+ K Sbjct: 1 MKCVDLFSGCGGLSLGFELA----GFEICAAFENWEKAIEIYKNNFSHPIYNIDLRNEKE 56 Query: 61 -TQDIPDH--DVLLAGFPCQPFSQAG 83 + I + D+++ G PCQ FS AG Sbjct: 57 AVEKIKKYSPDLIMGGPPCQDFSSAG 82 >gi|50949214|emb|CAF31654.1| putative C5-methyltransferase [Cloning vector pGID052] Length = 307 Score = 34.3 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 23/43 (53%) Query: 41 KTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +TY F ++ D K P++D+++ GFPC FS AG Sbjct: 112 QTYTDMFSENIVKHDKDIRKVAIFPNNDIMIGGFPCPGFSSAG 154 >gi|255283692|ref|ZP_05348247.1| C-5 cytosine-specific DNA methylase family protein [Bryantella formatexigens DSM 14469] gi|255265757|gb|EET58962.1| C-5 cytosine-specific DNA methylase family protein [Bryantella formatexigens DSM 14469] Length = 461 Score = 34.3 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 19/98 (19%) Query: 4 ITDLFCGIGGIRLDL------EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--- 54 + +LF G+GG R L E + + S+ P T A+ FG Sbjct: 5 VCELFAGVGGFRCGLNNIRTAEDYGKEEKWDTVWFSQWEPAEKSTQYAHDCYVYRFGTRL 64 Query: 55 ----------DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 +I + +PD ++L+ GFPCQ +S A Sbjct: 65 DKNGEDTTNYNIEDVDKTTLPDFNLLVGGFPCQDYSVA 102 >gi|262192113|ref|ZP_06050275.1| DNA-cytosine methyltransferase [Vibrio cholerae CT 5369-93] gi|262032024|gb|EEY50600.1| DNA-cytosine methyltransferase [Vibrio cholerae CT 5369-93] Length = 393 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 22/97 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------L 51 +K DLF G GG L + H V + E + + TY+ NF Sbjct: 3 IKAIDLFAGAGGFTL----SAIHAGVSVLAAIEFDEAAANTYKENFIKAGKHNIDLRAGK 58 Query: 52 IFGDIAKIKTQDIPDH--------DVLLAGFPCQPFS 80 FGDI + ++ D D++L G PCQ FS Sbjct: 59 DFGDINNVDPLELRDSLGLKKGELDLILGGPPCQGFS 95 >gi|269792571|ref|YP_003317475.1| DNA-cytosine methyltransferase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100206|gb|ACZ19193.1| DNA-cytosine methyltransferase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 350 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 13/91 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF------FSSEINPYSVKTYQANF----PNTLI 52 ++ +LFCG GG+ N R+ + ++++ + + +TY+ N P ++ Sbjct: 4 RLGELFCGPGGLAYG---AINARSADGKHFIVHEWANDYDKDTCETYRYNICPDRPESVY 60 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI K+ + D L GFPC FS G Sbjct: 61 HEDIRKLNMDKLTPIDALAFGFPCNDFSVVG 91 >gi|23097628|ref|NP_691094.1| site-specific DNA-methyltransferase [Oceanobacillus iheyensis HTE831] gi|22775851|dbj|BAC12129.1| site-specific DNA-methyltransferase (cytosine-specific) [Oceanobacillus iheyensis HTE831] Length = 596 Score = 33.9 bits (76), Expect = 6.9, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 19/96 (19%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LI-------F 53 K+ DLF G GG+ QT E + EIN + KTY N LI Sbjct: 13 KLIDLFAGAGGLSNGFIQT---GKFEVLGAVEINKSAAKTYVENHNKNEDLIIKSGNSGM 69 Query: 54 GDIAKI-------KTQDIPDHDVLLAGFPCQPFSQA 82 D++KI + + D V++ G PCQ FS A Sbjct: 70 SDVSKIDFANFILEKKTSGDEIVVIGGPPCQGFSNA 105 >gi|309789600|ref|ZP_07684181.1| BsaWI methylase [Oscillochloris trichoides DG6] gi|308228336|gb|EFO81983.1| BsaWI methylase [Oscillochloris trichoides DG6] Length = 436 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 15/89 (16%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDI 64 ++F G GG+ L L + H + E VKTY+ N P T+ I D+ I ++ + Sbjct: 18 EMFTGPGGLSLGLRSSGFH----VVGAVEKVESCVKTYRRNHPETIVIHDDVRNITSEQV 73 Query: 65 ----------PDHDVLLAGFPCQPFSQAG 83 D++ G PC+ FS AG Sbjct: 74 ISIVLKVTGKKTVDLVAGGPPCETFSTAG 102 >gi|307191164|gb|EFN74862.1| DNA (cytosine-5)-methyltransferase 3A [Camponotus floridanus] Length = 704 Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 4/58 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIF----GDIAKIKTQDIPDHDVLLAGFPCQPFS 80 V+ +++SEI+ ++ A+F + + + DI K K Q+I D+L+ G PC S Sbjct: 424 VDVYYASEIDKNALTISSAHFGDRITYLGDVRDITKEKIQEIAPIDLLIGGSPCNDLS 481 >gi|183230936|ref|XP_655267.2| DNA (cytosine-5)-methyltransferase [Entamoeba histolytica HM-1:IMSS] gi|45505012|gb|AAS66974.1| 5-cytosine DNA methyltransferase [Entamoeba histolytica] gi|169802689|gb|EAL49892.2| DNA (cytosine-5)-methyltransferase, putative [Entamoeba histolytica HM-1:IMSS] Length = 322 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 3/83 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + + F GIGG+R E++ + N F +IN + K Y NF + ++ I Sbjct: 6 VNVIEFFSGIGGLRSSYERSSININA-TFIPFDINEIANKIYSKNFKEEVQVKNLDSISI 64 Query: 62 QDIP--DHDVLLAGFPCQPFSQA 82 + I + + PCQP++ + Sbjct: 65 KQIESLNCNTWFMSPPCQPYNNS 87 >gi|17548155|ref|NP_521557.1| DNA modification cytosine-specific methyltransferase [Ralstonia solanacearum GMI1000] gi|17430462|emb|CAD16935.1| probable site-specific dna methylase protein [Ralstonia solanacearum GMI1000] Length = 364 Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 13/88 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--FPNTLIFGDIAKIKT 61 + LFCG GG L++ F E + +I P S+++Y N P DI IK Sbjct: 2 LLSLFCGAGG----LDKGFEQAGFEVGLAFDIRPDSIESYNRNRRAPIRGYCRDIRDIKP 57 Query: 62 QDIPD-------HDVLLAGFPCQPFSQA 82 + + + ++ G PCQ FS+A Sbjct: 58 KALDELFGETFRPSGIIGGPPCQSFSRA 85 >gi|319639604|ref|ZP_07994351.1| cytosine-specific methyltransferase [Neisseria mucosa C102] gi|317399175|gb|EFV79849.1| cytosine-specific methyltransferase [Neisseria mucosa C102] Length = 348 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 11/87 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQ 62 + DLFCG GG+ L Q + + ++ TY A T I D+ I + Sbjct: 10 VLDLFCGCGGLSLGFIQA----GFDVKLGIDYWQDAITTYTATHKGTQGIVADLFNITPE 65 Query: 63 DIPDH------DVLLAGFPCQPFSQAG 83 I DV++ G PCQ FS AG Sbjct: 66 QISQQTQIKQLDVIIGGPPCQGFSIAG 92 >gi|225026529|ref|ZP_03715721.1| hypothetical protein EUBHAL_00778 [Eubacterium hallii DSM 3353] gi|224956143|gb|EEG37352.1| hypothetical protein EUBHAL_00778 [Eubacterium hallii DSM 3353] Length = 461 Score = 33.9 bits (76), Expect = 8.4, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 19/98 (19%) Query: 4 ITDLFCGIGGIRLDL------EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--- 54 + +LF G+GG R L E + + ++ P T A+ FG Sbjct: 5 VCELFAGVGGFRCGLNNIKTAEDYGKEEKWDTVWFNQWEPSEKTTQYAHDCYVYRFGPRL 64 Query: 55 ----------DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 +I + IPD ++L+ GFPCQ +S A Sbjct: 65 DINGEDTTNYNIEDVDKAKIPDFNLLVGGFPCQDYSVA 102 >gi|253997214|ref|YP_003049278.1| DNA-cytosine methyltransferase [Methylotenera mobilis JLW8] gi|253983893|gb|ACT48751.1| DNA-cytosine methyltransferase [Methylotenera mobilis JLW8] Length = 358 Score = 33.5 bits (75), Expect = 8.6, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 13/95 (13%) Query: 2 LKITDLFCGIGGIRLDLE-----------QTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 LKI +LFCG GGI E T H + S + Y AN T Sbjct: 4 LKIGELFCGPGGIAYGAELANLELIGQTATTLKHAWAVDYHQSTVKTYLKNIKGANEHTT 63 Query: 51 LI--FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 L D+ + I + D GFPC FS+ G Sbjct: 64 LCSDVRDLNIPELSKISEIDGFAYGFPCNDFSRVG 98 >gi|14330659|emb|CAC41108.1| site-specific DNA-methyltransferase (cytosine-specific) [Klebsiella pneumoniae] Length = 375 Score = 33.5 bits (75), Expect = 8.7, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 19/85 (22%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFG----DI 56 FCG GG+ L L+Q + + +IN +V+TY N N +++ G + Sbjct: 16 FCGAGGMSLGLKQA----GFDVRLAFDINENAVETYNKNIGNHCEKLDASIVSGKFLLEK 71 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQ 81 A IKT+ D+ G PCQ FS+ Sbjct: 72 AGIKTR----LDLFSGGPPCQGFSK 92 >gi|110765384|ref|XP_001122269.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Apis mellifera] Length = 1427 Score = 33.5 bits (75), Expect = 9.4, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 LK D+F G GG+ L Q V+ ++ E + + Y+ N PNT +F Sbjct: 956 LKTLDVFAGCGGLSEGLRQA---GIVDNQWAIEKDEPAACAYRLNNPNTTVFCEDCNVLL 1012 Query: 54 -----GDIAKIKTQDIPDH---DVLLAGFPCQPFS 80 GD+ Q +P ++L G PCQ FS Sbjct: 1013 RKVMNGDLCDNNGQRLPQKGEVELLCGGPPCQGFS 1047 >gi|149210133|ref|XP_001522441.1| hypothetical protein MGCH7_ch7g548 [Magnaporthe oryzae 70-15] gi|86196503|gb|EAQ71141.1| hypothetical protein MGCH7_ch7g548 [Magnaporthe oryzae 70-15] Length = 877 Score = 33.5 bits (75), Expect = 9.7, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 6/79 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAK-IKTQD 63 D+FCG GG Q ++ E ++ TY+ NFP +F GDI ++ D Sbjct: 457 DMFCGAGGA----SQGARAAGFRLGYAVEHWNHAAATYRHNFPEVNLFEGDIFDFLQRND 512 Query: 64 IPDHDVLLAGFPCQPFSQA 82 + D+L PCQ +S A Sbjct: 513 LDFVDILHLSPPCQYWSPA 531 >gi|327438866|dbj|BAK15231.1| site-specific DNA methylase [Solibacillus silvestris StLB046] Length = 392 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 12/95 (12%) Query: 1 MLKITDLFCGIGGIRLDLE-------QTFNHRNVECFFSSEINPYSVKTYQANF-----P 48 + K +LF G GG+ L + +T +E +S++ + + +TY N Sbjct: 2 IFKKGELFNGPGGLSLAAKNTVVIHPETLEEFRIEHTWSNDFDQNACRTYALNICGDEND 61 Query: 49 NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++I G + K++ +P+ GFPC +S G Sbjct: 62 PSVICGPVEKLQINQLPEIQCFAFGFPCNDYSLVG 96 Searching..................................................done Results from round 2 >gi|313667524|ref|YP_004047808.1| cytosine-specific methyltransferase [Neisseria lactamica ST-640] gi|309378245|emb|CBX23130.1| DNA cytosine methyltransferase M.NlaX [Neisseria lactamica Y92-1009] gi|313004986|emb|CBN86414.1| cytosine-specific methyltransferase [Neisseria lactamica 020-06] Length = 313 Score = 154 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 53/83 (63%), Positives = 60/83 (72%), Gaps = 2/83 (2%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M KI DLF GIGGIRL EQ F+ V C FSSEI+ Y+V+TYQAN + GDI + Sbjct: 1 MFKIIDLFAGIGGIRLGFEQAFD--GVRCVFSSEIDKYAVQTYQANHGGETVCGDITQTD 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFSQAG Sbjct: 59 VADIPDHDILLAGFPCQPFSQAG 81 >gi|319407456|emb|CBI81106.1| Cytosine-specific methyltransferase NlaX [Bartonella sp. 1-1C] Length = 307 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 49/83 (59%), Positives = 61/83 (73%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M +I DLF GIGGIRL E F N +C F+SEI+ YS++TY+ NF N + GDI +I Sbjct: 1 MYRIIDLFAGIGGIRLGFESAFGLNNTQCIFTSEIDKYSIQTYKLNFNNDYVHGDITQIH 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++IP HD+LLAGFPCQPFSQAG Sbjct: 61 EEEIPKHDILLAGFPCQPFSQAG 83 >gi|261400948|ref|ZP_05987073.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970] gi|269209191|gb|EEZ75646.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970] Length = 313 Score = 152 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 53/83 (63%), Positives = 60/83 (72%), Gaps = 2/83 (2%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M KI DLF GIGGIRL EQ F+ V C FSSEI+ Y+V+TYQAN + GDI + Sbjct: 1 MFKIIDLFAGIGGIRLGFEQAFDD--VRCVFSSEIDKYAVQTYQANHGGETVCGDITQTD 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFSQAG Sbjct: 59 VADIPDHDILLAGFPCQPFSQAG 81 >gi|254780516|ref|YP_003064929.1| type II modification methyltransferase [Candidatus Liberibacter asiaticus str. psy62] gi|254040193|gb|ACT56989.1| type II modification methyltransferase [Candidatus Liberibacter asiaticus str. psy62] Length = 83 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 83/83 (100%), Positives = 83/83 (100%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK Sbjct: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 TQDIPDHDVLLAGFPCQPFSQAG Sbjct: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 >gi|127471|sp|P24581|MTNX_NEILA RecName: Full=Cytosine-specific methyltransferase NlaX; Short=M.NlaX gi|45004|emb|CAA38357.1| cytosine-specific methyltransferase of NlaIII [Neisseria lactamica] Length = 313 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 52/83 (62%), Positives = 59/83 (71%), Gaps = 2/83 (2%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M KI DLF GIGGIRL EQ F+ V C FSSEI+ Y+V+TYQAN + GDI + Sbjct: 1 MFKIIDLFAGIGGIRLGFEQAFDD--VRCVFSSEIDKYAVQTYQANHGGETVCGDITQTD 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+L AGFPCQPFSQAG Sbjct: 59 VADIPDHDILSAGFPCQPFSQAG 81 >gi|332188292|ref|ZP_08390019.1| DNA-cytosine methyltransferase family protein [Sphingomonas sp. S17] gi|332011688|gb|EGI53766.1| DNA-cytosine methyltransferase family protein [Sphingomonas sp. S17] Length = 423 Score = 149 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 46/83 (55%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 DLF GIGGIRL E C F+SE + Y+ KTY NF I GDI K+ Sbjct: 71 FTFIDLFAGIGGIRLGFEAA----GGRCVFTSEWDKYAQKTYIENFGEEHEIAGDITKVD 126 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHDVLLAGFPCQPFS AG Sbjct: 127 ADDIPDHDVLLAGFPCQPFSLAG 149 >gi|150026187|ref|YP_001297013.1| type II modification methyltransferase [Flavobacterium psychrophilum JIP02/86] gi|149772728|emb|CAL44211.1| Probable type II modification methyltransferase [Flavobacterium psychrophilum JIP02/86] Length = 335 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 50/82 (60%), Positives = 61/82 (74%), Gaps = 1/82 (1%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI DLF GIGGIRL E + N+EC F+SE N YS +TY AN+PN ++ GDI +I Sbjct: 7 IKIIDLFAGIGGIRLGFELASKN-NIECVFTSEWNKYSEQTYLANYPNEIVHGDITQISE 65 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP+HD+LLAGFPCQPFSQAG Sbjct: 66 TQIPEHDILLAGFPCQPFSQAG 87 >gi|328947602|ref|YP_004364939.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447926|gb|AEB13642.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 431 Score = 146 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 45/83 (54%), Positives = 53/83 (63%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 DLF GIGGIR EQ +C F+SE + ++ KTY N+P I GDI K+ Sbjct: 75 FTFIDLFAGIGGIRKGFEQA----GGKCVFTSEWDEFAQKTYSNNYPSKCPINGDITKVN 130 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +DIPDHDVLLAGFPCQPFS AG Sbjct: 131 AEDIPDHDVLLAGFPCQPFSIAG 153 >gi|315498495|ref|YP_004087299.1| transcriptional regulator, xre family [Asticcacaulis excentricus CB 48] gi|315416507|gb|ADU13148.1| transcriptional regulator, XRE family [Asticcacaulis excentricus CB 48] Length = 410 Score = 145 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 47/83 (56%), Positives = 55/83 (66%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60 DLF GIGG+R ++ H C F+SE N Y+ +TY ANF N I GDI +I+ Sbjct: 66 FTFIDLFAGIGGLRRGFDEIGGH----CVFTSEWNKYAQQTYAANFRDNHPIHGDITQIE 121 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 T DIPDHDVLLAGFPCQPFS AG Sbjct: 122 TADIPDHDVLLAGFPCQPFSIAG 144 >gi|323650698|gb|ADX97433.1| M1.BspACI [Bacillus psychrodurans] Length = 320 Score = 144 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 44/82 (53%), Positives = 56/82 (68%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG R+ LE+ +C FSS+I+ Y+ +TY+ NF GDI KIK+ Sbjct: 4 FKFIDLFSGIGGFRIALEE----NGGQCVFSSDIDKYARETYKENFGEEPS-GDITKIKS 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++IPDHD+L AGFPCQPFS AG Sbjct: 59 EEIPDHDILCAGFPCQPFSIAG 80 >gi|462657|sp|P34877|MTSA_LACLC RecName: Full=Modification methylase ScrFIA; Short=M.ScrFI-A; Short=M.ScrFIA; AltName: Full=Cytosine-specific methyltransferase ScrFIA gi|149493|gb|AAA25220.1| SCRFI methylase [Lactococcus lactis] gi|2327034|gb|AAB66696.1| 5-methyl-cytosine methyltransferase [Lactococcus lactis subsp. cremoris] Length = 389 Score = 143 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K+ DLF GIGG RL QT V+ FSSEI+ +++KTY+ANF + GDI KI Sbjct: 79 YKMIDLFAGIGGTRLGFHQT---EKVKSVFSSEIDKFAIKTYKANFGDEP-HGDITKIDE 134 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIPDHD+L+ GFPCQ FSQAG Sbjct: 135 KDIPDHDILVGGFPCQAFSQAG 156 >gi|217980150|ref|YP_002364200.1| DNA-cytosine methyltransferase [Thauera sp. MZ1T] gi|217508321|gb|ACK55106.1| DNA-cytosine methyltransferase [Thauera sp. MZ1T] Length = 419 Score = 143 bits (362), Expect = 9e-33, Method: Composition-based stats. Identities = 45/83 (54%), Positives = 52/83 (62%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 DLF G+GGIR+ E C F+SE + Y+ KTY NFP + GDI KI+ Sbjct: 66 FTFIDLFAGVGGIRMGFEA----HGGRCVFTSEWDSYAQKTYAENFPAEHPLNGDITKIE 121 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHDVLLAGFPCQPFS AG Sbjct: 122 AADIPDHDVLLAGFPCQPFSIAG 144 >gi|254429380|ref|ZP_05043087.1| DNA-cytosine methyltransferase superfamily [Alcanivorax sp. DG881] gi|196195549|gb|EDX90508.1| DNA-cytosine methyltransferase superfamily [Alcanivorax sp. DG881] Length = 435 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 K DLF GIGG+R+ E +C F+SE + Y+ +TY NF ++ + GDI ++ Sbjct: 86 FKFVDLFAGIGGLRMAFESA----GGQCVFTSEWDSYAQRTYLGNFGDSHQLNGDITEVN 141 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHDVLLAGFPCQPFS AG Sbjct: 142 AADIPDHDVLLAGFPCQPFSIAG 164 >gi|254251049|ref|ZP_04944367.1| Site-specific DNA methylase [Burkholderia dolosa AUO158] gi|124893658|gb|EAY67538.1| Site-specific DNA methylase [Burkholderia dolosa AUO158] Length = 530 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 43/83 (51%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 DLF GIGGIR+ E C F+SE + Y+ KTY NFP+ I GDI + Sbjct: 172 FTFIDLFAGIGGIRMAFE----LNGGRCVFTSEWDSYAQKTYHVNFPDGMPIHGDITDVD 227 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IP HDVLLAGFPCQPFS AG Sbjct: 228 ETSIPSHDVLLAGFPCQPFSIAG 250 >gi|268595734|ref|ZP_06129901.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae 35/02] gi|291044897|ref|ZP_06570606.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293397972|ref|ZP_06642178.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|268549123|gb|EEZ44541.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae 35/02] gi|291011791|gb|EFE03787.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291611918|gb|EFF40987.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] Length = 320 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 46/83 (55%), Positives = 52/83 (62%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLF GIGGIRL E+ FSSE + Y+ + Y+ANF FGDI I Sbjct: 6 MYKTIDLFSGIGGIRLGFEK----YGCTNVFSSEWDKYARQVYEANFGEKP-FGDINGID 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 61 PSDIPDHDILLAGFPCQPFSIAG 83 >gi|194099739|ref|YP_002002874.1| NgoIM [Neisseria gonorrhoeae NCCP11945] gi|240013125|ref|ZP_04720038.1| NgoIM [Neisseria gonorrhoeae DGI18] gi|240015568|ref|ZP_04722108.1| NgoIM [Neisseria gonorrhoeae FA6140] gi|240114103|ref|ZP_04728593.1| NgoIM [Neisseria gonorrhoeae MS11] gi|240114658|ref|ZP_04728720.1| NgoIM [Neisseria gonorrhoeae PID18] gi|240120196|ref|ZP_04733158.1| NgoIM [Neisseria gonorrhoeae PID24-1] gi|240122493|ref|ZP_04735449.1| NgoIM [Neisseria gonorrhoeae PID332] gi|240126658|ref|ZP_04739544.1| NgoIM [Neisseria gonorrhoeae SK-92-679] gi|254492718|ref|ZP_05105889.1| modification methylase NgoBI [Neisseria gonorrhoeae 1291] gi|260441536|ref|ZP_05795352.1| NgoIM [Neisseria gonorrhoeae DGI2] gi|268600171|ref|ZP_06134338.1| modification methylase NgoBI [Neisseria gonorrhoeae MS11] gi|268600304|ref|ZP_06134471.1| modification methylase NgoBI [Neisseria gonorrhoeae PID18] gi|268602536|ref|ZP_06136703.1| modification methylase NgoBI [Neisseria gonorrhoeae PID1] gi|268681085|ref|ZP_06147947.1| modification methylase NgoBI [Neisseria gonorrhoeae PID332] gi|268685237|ref|ZP_06152099.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-92-679] gi|268685565|ref|ZP_06152427.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-93-1035] gi|193935029|gb|ACF30853.1| NgoIM [Neisseria gonorrhoeae NCCP11945] gi|226511758|gb|EEH61103.1| modification methylase NgoBI [Neisseria gonorrhoeae 1291] gi|268584302|gb|EEZ48978.1| modification methylase NgoBI [Neisseria gonorrhoeae MS11] gi|268584435|gb|EEZ49111.1| modification methylase NgoBI [Neisseria gonorrhoeae PID18] gi|268586667|gb|EEZ51343.1| modification methylase NgoBI [Neisseria gonorrhoeae PID1] gi|268621369|gb|EEZ53769.1| modification methylase NgoBI [Neisseria gonorrhoeae PID332] gi|268625521|gb|EEZ57921.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-92-679] gi|268625849|gb|EEZ58249.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-93-1035] gi|317165226|gb|ADV08767.1| NgoIM [Neisseria gonorrhoeae TCDC-NG08107] Length = 315 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 46/83 (55%), Positives = 52/83 (62%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLF GIGGIRL E+ FSSE + Y+ + Y+ANF FGDI I Sbjct: 1 MYKTIDLFSGIGGIRLGFEK----YGCTNVFSSEWDKYARQVYEANFGEKP-FGDINGID 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 56 PSDIPDHDILLAGFPCQPFSIAG 78 >gi|220930232|ref|YP_002507141.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] gi|220000560|gb|ACL77161.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] Length = 416 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 46/82 (56%), Positives = 53/82 (64%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L DLF GIGGIRL E + +C FSSE + Y+ +TY+AN+ GDI KI Sbjct: 101 LTFIDLFAGIGGIRLGFE----DKYTKCVFSSEWDKYAAQTYEANYGEKP-HGDITKINE 155 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHDVLLAGFPCQPFS G Sbjct: 156 NDIPDHDVLLAGFPCQPFSNIG 177 >gi|153955289|ref|YP_001396054.1| DNA methylase [Clostridium kluyveri DSM 555] gi|146348147|gb|EDK34683.1| Predicted DNA methylase [Clostridium kluyveri DSM 555] Length = 416 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 46/82 (56%), Positives = 53/82 (64%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L DLF GIGGIRL E + +C FSSE + Y+ +TY+AN+ GDI KI Sbjct: 101 LTFIDLFAGIGGIRLGFE----DKYTKCVFSSEWDKYAAQTYEANYGEKP-HGDITKINE 155 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHDVLLAGFPCQPFS G Sbjct: 156 NDIPDHDVLLAGFPCQPFSNIG 177 >gi|12229862|sp|Q59603|MTB1_NEIGO RecName: Full=Modification methylase NgoBI; Short=M.NgoBI; AltName: Full=Cytosine-specific methyltransferase NgoBI; Short=M.NgoI gi|5924404|gb|AAB03206.2| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae] Length = 317 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 46/83 (55%), Positives = 52/83 (62%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLF GIGGIRL E+ FSSE + Y+ + Y+ANF FGDI I Sbjct: 1 MYKTIDLFSGIGGIRLGFEK----YGCTNVFSSEWDKYARQVYEANFGEKP-FGDINGID 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 56 PSDIPDHDILLAGFPCQPFSIAG 78 >gi|323486195|ref|ZP_08091524.1| cytosine-specific methyltransferase [Clostridium symbiosum WAL-14163] gi|323400521|gb|EGA92890.1| cytosine-specific methyltransferase [Clostridium symbiosum WAL-14163] Length = 382 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 42/82 (51%), Positives = 55/82 (67%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF GIGG+R+ E+ +C +SSE N YS +TY ANF GDI +++ Sbjct: 55 FRFIDLFAGIGGMRIAYERA----GGKCVYSSEWNKYSQQTYFANFGEQP-EGDITQVEA 109 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIPDHD+L+AGFPCQPFS AG Sbjct: 110 EDIPDHDILVAGFPCQPFSIAG 131 >gi|268597921|ref|ZP_06132088.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA19] gi|268551709|gb|EEZ46728.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA19] Length = 320 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 46/83 (55%), Positives = 52/83 (62%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLF GIGGIRL E+ FSSE + Y+ + Y+ANF FGDI I Sbjct: 6 MYKTIDLFSGIGGIRLGFEK----YGCTNVFSSEWDKYARQVYEANFGEKP-FGDINGID 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 61 PSDIPDHDILLAGFPCQPFSIAG 83 >gi|219855710|ref|YP_002472832.1| hypothetical protein CKR_2367 [Clostridium kluyveri NBRC 12016] gi|219569434|dbj|BAH07418.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 419 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 46/82 (56%), Positives = 53/82 (64%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L DLF GIGGIRL E + +C FSSE + Y+ +TY+AN+ GDI KI Sbjct: 104 LTFIDLFAGIGGIRLGFE----DKYTKCVFSSEWDKYAAQTYEANYGEKP-HGDITKINE 158 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHDVLLAGFPCQPFS G Sbjct: 159 NDIPDHDVLLAGFPCQPFSNIG 180 >gi|59802299|ref|YP_209011.1| NgoIM [Neisseria gonorrhoeae FA 1090] gi|240081825|ref|ZP_04726368.1| NgoIM [Neisseria gonorrhoeae FA19] gi|59719194|gb|AAW90599.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA 1090] Length = 315 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 46/83 (55%), Positives = 52/83 (62%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLF GIGGIRL E+ FSSE + Y+ + Y+ANF FGDI I Sbjct: 1 MYKTIDLFSGIGGIRLGFEK----YGCTNVFSSEWDKYARQVYEANFGEKP-FGDINGID 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 56 PSDIPDHDILLAGFPCQPFSIAG 78 >gi|163732386|ref|ZP_02139832.1| hypothetical protein RLO149_03007 [Roseobacter litoralis Och 149] gi|161394684|gb|EDQ19007.1| hypothetical protein RLO149_03007 [Roseobacter litoralis Och 149] Length = 410 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 40/83 (48%), Positives = 54/83 (65%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 DLF GIGG+R +E C F+SE + ++ +TY ANFP+ I GDI +I Sbjct: 63 FSFIDLFAGIGGLRKAMESA----GGRCVFTSEWDRFAQQTYDANFPDNRPIAGDITEID 118 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +++P+HDVL+AGFPCQPFS AG Sbjct: 119 AEELPEHDVLVAGFPCQPFSIAG 141 >gi|328948822|ref|YP_004366159.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328449146|gb|AEB14862.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 437 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 53/84 (63%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF GIGGIR E + EC F+SEI P++V+ + N PN + GDI KI Sbjct: 7 IKFIDLFAGIGGIRKGFESACADLGIKTECVFTSEIKPHAVEVLKQNHPNETVRGDITKI 66 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T +IPD D LL GFPCQ FS AG Sbjct: 67 ETAEIPDFDFLLGGFPCQAFSAAG 90 >gi|312898460|ref|ZP_07757850.1| DNA (cytosine-5-)-methyltransferase [Megasphaera micronuciformis F0359] gi|310620379|gb|EFQ03949.1| DNA (cytosine-5-)-methyltransferase [Megasphaera micronuciformis F0359] Length = 400 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 44/82 (53%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGG+RL EQ H C +S+E N YS +TY ANF GDI K+ Sbjct: 53 FTFIDLFAGIGGMRLAYEQAGGH----CVYSNEWNKYSQQTYFANFGEQPD-GDITKVDE 107 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L+AGFPCQPFS AG Sbjct: 108 NSIPDHDILVAGFPCQPFSIAG 129 >gi|172036128|ref|YP_001802629.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] gi|171697582|gb|ACB50563.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] Length = 349 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++K DLF GIGG+RL + F +C FSSE + Y+ KTY+ANF FGDI +I Sbjct: 38 IIKFVDLFAGIGGMRLGFSRPFT----QCVFSSEWDKYAQKTYEANFQEKP-FGDINEIH 92 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 QDIPDHD+L+ GFPCQPFS G Sbjct: 93 LQDIPDHDILIGGFPCQPFSTIG 115 >gi|166368844|ref|YP_001661117.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa NIES-843] gi|166091217|dbj|BAG05925.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa NIES-843] Length = 338 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 45/83 (54%), Positives = 54/83 (65%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+K DLF GIGG R+ E + +C FSSE N +S KTY+ANF ++ GDI I Sbjct: 1 MVKFIDLFAGIGGFRIAFE----NLGCQCVFSSEWNKFSRKTYEANFNDSP-EGDITLIP 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS AG Sbjct: 56 ALTIPDHDILTAGFPCQPFSIAG 78 >gi|296126560|ref|YP_003633812.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563] gi|296018376|gb|ADG71613.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563] Length = 311 Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats. Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 6/83 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M + DLF G+GG L + C F+SEI+ + +TY+ NFP+T++ GDI +I Sbjct: 1 MYRFIDLFAGVGGFHLAF------NSENCVFASEIDINARETYKLNFPDTVLEGDITEID 54 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++IP+HD+L AGFPCQPFS AG Sbjct: 55 EKNIPEHDILCAGFPCQPFSVAG 77 >gi|260554958|ref|ZP_05827179.1| DNA-methyltransferase MKpn2kI [Acinetobacter baumannii ATCC 19606] gi|260411500|gb|EEX04797.1| DNA-methyltransferase MKpn2kI [Acinetobacter baumannii ATCC 19606] Length = 413 Score = 139 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 45/82 (54%), Positives = 53/82 (64%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGGIRL +Q +C FSSE + ++ KTY ANF L GDI +I+ Sbjct: 59 FTFIDLFAGIGGIRLPFQQLKG----KCVFSSEWDKFAQKTYAANFG-ELPSGDITQIRA 113 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LL GFPCQ FSQAG Sbjct: 114 ADIPDHDILLGGFPCQAFSQAG 135 >gi|148244085|ref|YP_001220322.1| DNA-cytosine methyltransferase [Acidiphilium cryptum JF-5] gi|146400648|gb|ABQ29180.1| DNA-cytosine methyltransferase [Acidiphilium cryptum JF-5] Length = 487 Score = 139 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 45/84 (53%), Positives = 52/84 (61%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 DLF GIGG+R E C F+SE + YS TY AN+P + I GDI KI Sbjct: 132 FTFIDLFAGIGGLRRGFEA----IGGRCVFTSEWDKYSQATYAANYPYDDHTISGDITKI 187 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +DIP+HDVLLAGFPCQPFS AG Sbjct: 188 GEKDIPEHDVLLAGFPCQPFSIAG 211 >gi|167751356|ref|ZP_02423483.1| hypothetical protein EUBSIR_02342 [Eubacterium siraeum DSM 15702] gi|167655602|gb|EDR99731.1| hypothetical protein EUBSIR_02342 [Eubacterium siraeum DSM 15702] Length = 475 Score = 139 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 2/83 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 + DLF GIGGIRL E+ F ++ +E F SE + Y+ KTY+ANF + I GDI KI Sbjct: 141 FRSIDLFAGIGGIRLGFERAFKNQ-IETVFVSEWDEYAQKTYRANFEDDFEIAGDITKID 199 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+P+ D+ LAGFPCQ FS AG Sbjct: 200 ESDVPEFDICLAGFPCQAFSLAG 222 >gi|259500984|ref|ZP_05743886.1| modification methylase EcoRII [Lactobacillus iners DSM 13335] gi|302190566|ref|ZP_07266820.1| DNA-cytosine methyltransferase [Lactobacillus iners AB-1] gi|259167678|gb|EEW52173.1| modification methylase EcoRII [Lactobacillus iners DSM 13335] Length = 336 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL LE +C +S+E + ++ +TYQ NF +T GDI ++ Sbjct: 12 YKFIDLFAGIGGFRLALES----FGAKCVYSNEWDKFAQETYQMNFGDTP-EGDITQVDE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 67 TSIPDHDILCAGFPCQPFSISG 88 >gi|78777762|ref|YP_394077.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM 1251] gi|78498302|gb|ABB44842.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM 1251] Length = 328 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 44/82 (53%), Positives = 55/82 (67%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF GIGGIRL EQ F + +E F+SEI+ Y+ +TY ANF T GDI +I Sbjct: 20 FRAIDLFAGIGGIRLGFEQAFGEK-IEFVFASEIDKYARETYYANFGETP-HGDITQIDE 77 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++IP D+LLAGFPCQ FS AG Sbjct: 78 KNIPPFDILLAGFPCQAFSVAG 99 >gi|300813374|ref|ZP_07093725.1| Modification methylase HpaII [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512517|gb|EFK39666.1| Modification methylase HpaII [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 347 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 47/84 (55%), Positives = 55/84 (65%), Gaps = 2/84 (2%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 M K DLF GIGGIRL +Q F + ++E F SE + + +TY ANF IFGDI KI Sbjct: 1 MFKSIDLFAGIGGIRLGFDQAFGN-DIETVFVSEWDKKAQETYIANFGEKPKIFGDITKI 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 DIP HD+LLAGFPCQ FS AG Sbjct: 60 DEIDIPIHDILLAGFPCQAFSLAG 83 >gi|289423024|ref|ZP_06424844.1| putative site-specific DNA-methyltransferase [Peptostreptococcus anaerobius 653-L] gi|289156598|gb|EFD05243.1| putative site-specific DNA-methyltransferase [Peptostreptococcus anaerobius 653-L] Length = 706 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF GIGG RL E +C FSSEI+ ++ + Y+ NF DI ++ Sbjct: 6 LKFIDLFAGIGGFRLGFENA----GCKCVFSSEIDDHACEMYELNFGENPRC-DITQLNP 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIPD D+L AGFPCQ FS G Sbjct: 61 KDIPDFDILCAGFPCQAFSICG 82 >gi|54293106|ref|YP_125521.1| hypothetical protein lpl0145 [Legionella pneumophila str. Lens] gi|53752938|emb|CAH14374.1| hypothetical protein lpl0145 [Legionella pneumophila str. Lens] Length = 417 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 45/84 (53%), Positives = 51/84 (60%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 DLF GIGGIRL E EC F+SE + YS TY+ NF + I GDI K+ Sbjct: 67 FSFIDLFAGIGGIRLGFES----IGGECIFTSEWDKYSQITYRKNFRNDHHPIIGDITKV 122 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 IP+HDVLLAGFPCQPFS AG Sbjct: 123 DVNFIPEHDVLLAGFPCQPFSLAG 146 >gi|313892290|ref|ZP_07825883.1| modification methylase HpaII [Dialister microaerophilus UPII 345-E] gi|313119428|gb|EFR42627.1| modification methylase HpaII [Dialister microaerophilus UPII 345-E] Length = 329 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 2/84 (2%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 M K DLF GIGGIRL EQ F + ++ F SE + + +TY+ANF + + I GDI I Sbjct: 1 MYKSIDLFAGIGGIRLGFEQAFKNE-IKTVFVSEWDKKAQETYRANFKDDIEIRGDINTI 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +DIP H++LLAGFPCQ FS AG Sbjct: 60 DEKDIPKHNILLAGFPCQAFSLAG 83 >gi|127427|sp|P17044|MTBF_BACSU RecName: Full=Modification methylase BsuFI; Short=M.BsuFI; AltName: Full=Cytosine-specific methyltransferase BsuFI gi|39984|emb|CAA35888.1| unnamed protein product [Bacillus subtilis] Length = 409 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 45/82 (54%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L DLF GIGGIRL E + +C FSSE + Y+ +TY+AN+ GDI KI Sbjct: 101 LTFIDLFAGIGGIRLGFE----DKYTKCVFSSEWDKYAAQTYEANYGEKP-HGDITKINE 155 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPD DVLLAGFPCQPFS G Sbjct: 156 NDIPDQDVLLAGFPCQPFSNIG 177 >gi|329920363|ref|ZP_08277095.1| modification methylase HhaI [Lactobacillus iners SPIN 1401G] gi|328936039|gb|EGG32492.1| modification methylase HhaI [Lactobacillus iners SPIN 1401G] Length = 336 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 12 YKFIDLFAGIGGFRLALES----FGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 67 TSIPDHDILCAGFPCQPFSISG 88 >gi|296313699|ref|ZP_06863640.1| modification methylase NgoBI [Neisseria polysaccharea ATCC 43768] gi|296839717|gb|EFH23655.1| modification methylase NgoBI [Neisseria polysaccharea ATCC 43768] Length = 315 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 46/83 (55%), Positives = 52/83 (62%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLF GIGGIRL E+ FSSE + Y+ + Y+ANF FGDI I Sbjct: 1 MYKTIDLFSGIGGIRLGFEK----YGCTNVFSSEWDKYARQMYEANFGEKP-FGDINGID 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 56 PSDIPDHDILLAGFPCQPFSIAG 78 >gi|254804105|ref|YP_003082326.1| putative type II DNA modification methyltransferase [Neisseria meningitidis alpha14] gi|254667647|emb|CBA03458.1| putative type II DNA modification methyltransferase [Neisseria meningitidis alpha14] Length = 315 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 46/83 (55%), Positives = 52/83 (62%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLF GIGGIRL E+ FSSE + Y+ + Y+ANF FGDI I Sbjct: 1 MYKTIDLFSGIGGIRLGFEK----YGCTNVFSSEWDKYARQMYEANFGEKP-FGDINGID 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 56 PSDIPDHDILLAGFPCQPFSIAG 78 >gi|126464142|ref|YP_001045255.1| DNA-cytosine methyltransferase [Rhodobacter sphaeroides ATCC 17029] gi|126105953|gb|ABN78483.1| DNA-cytosine methyltransferase [Rhodobacter sphaeroides ATCC 17029] Length = 417 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + DLF GIGG+R + H C F+SE + ++ +TY+AN+ P + GDI K Sbjct: 62 FRFIDLFAGIGGLRRGFDAVGGH----CVFTSEWDRFAQQTYRANYHDGPAHVFKGDITK 117 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ +IP+HDVLLAGFPCQPFS AG Sbjct: 118 VEMHEIPEHDVLLAGFPCQPFSIAG 142 >gi|312872570|ref|ZP_07732638.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2062A-h1] gi|311091932|gb|EFQ50308.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2062A-h1] Length = 336 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 12 YKFIDLFAGIGGFRLALES----FGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 67 TSIPDHDILCAGFPCQPFSISG 88 >gi|224543136|ref|ZP_03683675.1| hypothetical protein CATMIT_02336 [Catenibacterium mitsuokai DSM 15897] gi|224523923|gb|EEF93028.1| hypothetical protein CATMIT_02336 [Catenibacterium mitsuokai DSM 15897] Length = 430 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 44/84 (52%), Positives = 52/84 (61%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF GIGGIR E + R V EC F+SEI PY++K + N PN I GDI ++ Sbjct: 5 IKFVDLFAGIGGIRKGFELACSDRGVKTECVFTSEIKPYAIKVLKQNHPNETITGDITQV 64 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 IPD D LL GFPCQ FS AG Sbjct: 65 DATKIPDFDFLLGGFPCQAFSAAG 88 >gi|54297036|ref|YP_123405.1| hypothetical protein lpp1078 [Legionella pneumophila str. Paris] gi|53750821|emb|CAH12229.1| hypothetical protein lpp1078 [Legionella pneumophila str. Paris] Length = 320 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 48/82 (58%), Positives = 55/82 (67%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIR+ ++ N EC FSSEI+PY KTY+ANF FGDI KI Sbjct: 6 FKFIDLFAGIGGIRIPFDK----LNGECVFSSEIDPYCQKTYEANFGEKP-FGDITKISP 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 QD+PDHD+LL GFPCQ FS G Sbjct: 61 QDVPDHDILLGGFPCQAFSIIG 82 >gi|309803758|ref|ZP_07697844.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 11V1-d] gi|308164167|gb|EFO66428.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 11V1-d] Length = 336 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 12 YKFIDLFAGIGGFRLALES----FGAQCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 67 TSIPDHDILCAGFPCQPFSISG 88 >gi|291530358|emb|CBK95943.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3] Length = 696 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 44/83 (53%), Positives = 54/83 (65%), Gaps = 2/83 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 K DLF GIGGIRL EQ F + + F SE + Y+ +TY+ANF + I GDI +I Sbjct: 4 YKSIDLFAGIGGIRLGFEQAFGNS-INTVFVSEWDKYAQETYKANFRDKFDIAGDITQID 62 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +DIPD D+ LAGFPCQ FS AG Sbjct: 63 ERDIPDFDICLAGFPCQAFSLAG 85 >gi|331002097|ref|ZP_08325616.1| hypothetical protein HMPREF0491_00478 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411191|gb|EGG90607.1| hypothetical protein HMPREF0491_00478 [Lachnospiraceae oral taxon 107 str. F0167] Length = 706 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF GIGG RL E +C FSSEI+ ++ + Y+ NF DI K+ Sbjct: 6 LKFIDLFAGIGGFRLGFEDA----GCKCVFSSEIDEHACEMYELNFGENPKC-DITKLNI 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIPD D+L AGFPCQ FS G Sbjct: 61 KDIPDFDILCAGFPCQAFSICG 82 >gi|149184876|ref|ZP_01863193.1| hypothetical protein ED21_17522 [Erythrobacter sp. SD-21] gi|148830987|gb|EDL49421.1| hypothetical protein ED21_17522 [Erythrobacter sp. SD-21] Length = 410 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 DLF GIGG+R + F+ C F+SE + Y+ TY N+P+ I GDI K+ Sbjct: 64 FTFIDLFAGIGGLR----RAFDGIGGRCVFTSEWDKYAQLTYHTNYPDNRPIAGDITKVP 119 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +IP HDVLLAGFPCQPFS AG Sbjct: 120 VDEIPVHDVLLAGFPCQPFSIAG 142 >gi|210631776|ref|ZP_03297018.1| hypothetical protein COLSTE_00903 [Collinsella stercoris DSM 13279] gi|210159896|gb|EEA90867.1| hypothetical protein COLSTE_00903 [Collinsella stercoris DSM 13279] Length = 390 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGGIR+ ++ EC FS E + ++ KTY+ N+ T GDI ++ Sbjct: 73 FTFIDLFAGIGGIRMPFQE----LGGECVFSCEWDKFAQKTYRMNYGETP-AGDIREVAA 127 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPD DVLLAGFPCQPFS AG Sbjct: 128 SDIPDFDVLLAGFPCQPFSLAG 149 >gi|315608882|ref|ZP_07883855.1| modification methylase EcoRII [Prevotella buccae ATCC 33574] gi|315249409|gb|EFU29425.1| modification methylase EcoRII [Prevotella buccae ATCC 33574] Length = 312 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 43/82 (52%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGGIRL E H C FSSE + + KTY+ANF GDI KI+ Sbjct: 6 FSFIDLFAGIGGIRLGFESAGGH----CVFSSEFDENACKTYEANFGEHPS-GDITKIEA 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIPD D+LL GFPCQ FS G Sbjct: 61 KDIPDFDILLGGFPCQAFSIIG 82 >gi|290969050|ref|ZP_06560585.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1 str. 28L] gi|290781006|gb|EFD93599.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1 str. 28L] Length = 333 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 46/84 (54%), Positives = 54/84 (64%), Gaps = 2/84 (2%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 M + DLF GIGGIRL EQ F + F+SE N S +TY ANF + IFGDI I Sbjct: 1 MYRAIDLFAGIGGIRLGFEQAFG-AEMTTVFTSEWNKKSQETYLANFGEEIHIFGDITAI 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 ++IP HD+LLAGFPCQ FS AG Sbjct: 60 DERNIPPHDILLAGFPCQAFSLAG 83 >gi|315653956|ref|ZP_07906872.1| modification methylase EcoRII [Lactobacillus iners ATCC 55195] gi|315488652|gb|EFU78298.1| modification methylase EcoRII [Lactobacillus iners ATCC 55195] Length = 336 Score = 137 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 12 YKFIDLFAGIGGFRLALES----FGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 67 TRIPDHDILCAGFPCQPFSISG 88 >gi|312874943|ref|ZP_07734962.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2053A-b] gi|311089688|gb|EFQ48113.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2053A-b] Length = 336 Score = 137 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 12 YKFIDLFAGIGGFRLALES----FGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 67 TRIPDHDILCAGFPCQPFSISG 88 >gi|312874304|ref|ZP_07734336.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2052A-d] gi|311090177|gb|EFQ48589.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 2052A-d] Length = 336 Score = 137 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 12 YKFIDLFAGIGGFRLALES----FGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 67 TRIPDHDILCAGFPCQPFSISG 88 >gi|309809622|ref|ZP_07703479.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners SPIN 2503V10-D] gi|308170103|gb|EFO72139.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners SPIN 2503V10-D] Length = 336 Score = 137 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 12 YKFIDLFAGIGGFRLALES----FGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 67 TRIPDHDILCAGFPCQPFSISG 88 >gi|309804726|ref|ZP_07698791.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 09V1-c] gi|312871535|ref|ZP_07731628.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 3008A-a] gi|325913106|ref|ZP_08175476.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B] gi|308166118|gb|EFO68336.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 09V1-c] gi|311092930|gb|EFQ51281.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF 3008A-a] gi|325477527|gb|EGC80669.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B] Length = 336 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 12 YKFIDLFAGIGGFRLALES----FGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 67 TRIPDHDILCAGFPCQPFSISG 88 >gi|309807025|ref|ZP_07701007.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 03V1-b] gi|308166645|gb|EFO68842.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV 03V1-b] Length = 336 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL LE +C +S+E + ++ +TYQ NF +T GDI ++ Sbjct: 12 YKFIDLFAGIGGFRLALES----FGAKCVYSNEWDKFAQETYQMNFGDTP-GGDITQVDE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 67 TSIPDHDILCAGFPCQPFSISG 88 >gi|189423370|ref|YP_001950547.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ] gi|189419629|gb|ACD94027.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ] Length = 415 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 47/84 (55%), Positives = 51/84 (60%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 M DLF GIGGIRL + C F+SE N +S KTY NF N I GDI Sbjct: 67 MFTFIDLFAGIGGIRLGFQSA----GGRCVFTSEWNDWSQKTYVENFGNEHAIVGDIVPY 122 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +DIPDHDVLLAGFPCQPFS AG Sbjct: 123 PAEDIPDHDVLLAGFPCQPFSIAG 146 >gi|254445875|ref|ZP_05059351.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae bacterium DG1235] gi|198260183|gb|EDY84491.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae bacterium DG1235] Length = 321 Score = 137 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF GIGG R+ LE+ EC FSSEI+ ++ TY+ NF + GDI KI Sbjct: 7 FRFIDLFAGIGGFRIGLER----LGGECVFSSEIDRHAAATYERNFGHKP-AGDITKIDA 61 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++PDH+V+ GFPCQPFS +G Sbjct: 62 SEVPDHEVICGGFPCQPFSVSG 83 >gi|325912401|ref|ZP_08174796.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 143-D] gi|325475743|gb|EGC78914.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 143-D] Length = 336 Score = 137 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL LE +C +S+E + ++ +TYQ NF +T GDI ++ Sbjct: 12 YKFIDLFAGIGGFRLALES----FGAKCVYSNEWDRFAQETYQMNFGDTP-EGDITQVDE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 67 TSIPDHDILCAGFPCQPFSISG 88 >gi|325913633|ref|ZP_08175995.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B] gi|325476992|gb|EGC80142.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B] Length = 372 Score = 137 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 45/82 (54%), Positives = 55/82 (67%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGGIRL E + +N EC +SSE + Y+ KTYQANF + GDI K+ Sbjct: 56 IKFIDLFAGIGGIRLGFE--GDSKNTECVYSSEWDKYAQKTYQANFG-VMPDGDITKVSA 112 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP+ +VLLAGFPCQPFS G Sbjct: 113 SSIPNFNVLLAGFPCQPFSSIG 134 >gi|119355933|ref|YP_910577.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM 266] gi|119353282|gb|ABL64153.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM 266] Length = 425 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 43/83 (51%), Positives = 52/83 (62%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 DLF GIGG+R E+ C F+SE + YS +TY ANF + I GDI KI Sbjct: 67 FTFIDLFAGIGGMRKAFEE----LGGRCVFTSEWDKYSRQTYCANFDCDHEIGGDITKID 122 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +DIP HD+L+AGFPCQPFS AG Sbjct: 123 ARDIPSHDILVAGFPCQPFSIAG 145 >gi|50914506|ref|YP_060478.1| Type II restriction-modification system methylation subunit [Streptococcus pyogenes MGAS10394] gi|40218542|gb|AAR83196.1| type II modification methylase [Streptococcus pyogenes] gi|50261587|gb|AAT72355.1| methylase [Streptococcus pyogenes] gi|50903580|gb|AAT87295.1| Type II restriction-modification system methylation subunit [Streptococcus pyogenes MGAS10394] gi|114386439|gb|ABI74454.1| DNA methyltransferase [Streptococcus pyogenes] Length = 408 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 43/82 (52%), Positives = 53/82 (64%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K+ DLF GIGG RL + T VE F+SE + ++ KTY NF +T GDI +I Sbjct: 101 FKMIDLFAGIGGTRLGFQLTNE---VETVFTSEWDKFAQKTYITNFGDTP-EGDITQIDE 156 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L+AGFPCQ FSQAG Sbjct: 157 NTIPDHDILVAGFPCQAFSQAG 178 >gi|238922589|ref|YP_002936102.1| modification methylase [Eubacterium rectale ATCC 33656] gi|238874261|gb|ACR73968.1| modification methylase [Eubacterium rectale ATCC 33656] Length = 392 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGG+RL E + C +S+E N YS +TY ANF GDI K+ Sbjct: 65 FTFIDLFAGIGGMRLAYE----NVGGRCVYSNEWNKYSQQTYYANFGEQP-EGDITKVDA 119 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L+AGFPCQPFS AG Sbjct: 120 KTIPDHDILVAGFPCQPFSIAG 141 >gi|283471715|emb|CAQ50926.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Staphylococcus aureus subsp. aureus ST398] Length = 397 Score = 136 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K+ DLF GIGG RL + H NV+C FSSE + +S KTY+ANF T GDI +I Sbjct: 86 YKMIDLFAGIGGTRLGFQ---LHGNVKCVFSSEWDKFSAKTYKANFGETP-KGDITQIIA 141 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +IP HD+L+AGFPCQ FSQAG Sbjct: 142 DEIPTHDILVAGFPCQAFSQAG 163 >gi|149926993|ref|ZP_01915251.1| C-5 cytosine-specific DNA methylase [Limnobacter sp. MED105] gi|149824214|gb|EDM83434.1| C-5 cytosine-specific DNA methylase [Limnobacter sp. MED105] Length = 435 Score = 136 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 DLF G+GGIR + F ++ +C F+SE + Y+ KTY+ N+ + I GDI K+ Sbjct: 85 FTFIDLFAGVGGIR----RAFENQGGKCVFTSEWDSYAQKTYRENYQRDHHEISGDITKV 140 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 T DIP+HDVLLAGFPCQPFS AG Sbjct: 141 NTVDIPNHDVLLAGFPCQPFSIAG 164 >gi|325989685|ref|YP_004249384.1| cytosine-specific methyltransferase [Mycoplasma suis KI3806] gi|323574770|emb|CBZ40430.1| Cytosine-specific methyltransferase [Mycoplasma suis] Length = 326 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K+ DLF GIGG RL T V+ FSSEI+ ++ +TY++NF + + GDI +I + Sbjct: 19 YKMIDLFAGIGGTRLGFHLTGE---VKVVFSSEIDKFAKQTYKSNFSDEPL-GDIREINS 74 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIP+HD+L+AGFPCQ FSQAG Sbjct: 75 EDIPNHDILVAGFPCQAFSQAG 96 >gi|86136173|ref|ZP_01054752.1| hypothetical protein MED193_18659 [Roseobacter sp. MED193] gi|85827047|gb|EAQ47243.1| hypothetical protein MED193_18659 [Roseobacter sp. MED193] Length = 399 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 42/83 (50%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLF GIGG+R+ E C F+SE N +S +TY ANF + GDI +I Sbjct: 50 FSFIDLFAGIGGLRVGFEAA----GGTCVFTSEWNRFSQETYSANFGDEHPLSGDITEIS 105 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +IP HDVLLAGFPCQPFS AG Sbjct: 106 EAEIPAHDVLLAGFPCQPFSIAG 128 >gi|326571776|gb|EGE21785.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC7] Length = 458 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIRL E+ C FSSE + ++ +TYQ N + + FGDI +I Sbjct: 120 FKFIDLFAGIGGIRLGAER----NGGLCVFSSEFDKFAQQTYQLNH-HEMPFGDITQIDA 174 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++P HD+LLAGFPCQPFS +G Sbjct: 175 NNLPSHDLLLAGFPCQPFSYSG 196 >gi|319893523|ref|YP_004150398.1| DNA-cytosine methyltransferase [Staphylococcus pseudintermedius HKU10-03] gi|317163219|gb|ADV06762.1| DNA-cytosine methyltransferase [Staphylococcus pseudintermedius HKU10-03] Length = 394 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 44/82 (53%), Positives = 56/82 (68%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K+ DLF GIGG RL + + NV+ FSSE + +S KTY+ANF + GDI +IK Sbjct: 86 YKMIDLFAGIGGTRLGFQ---LNGNVKSVFSSEWDKFSQKTYKANFG-EIPAGDITEIKE 141 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIP+HD+L+ GFPCQ FSQAG Sbjct: 142 GDIPNHDILVGGFPCQAFSQAG 163 >gi|325973250|ref|YP_004250314.1| cytosine-specific DNA modification methylase, HpaII-like protein [Mycoplasma suis str. Illinois] gi|323651852|gb|ADX97934.1| cytosine-specific DNA modification methylase, HpaII-like protein [Mycoplasma suis str. Illinois] Length = 326 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL T V+ FSSEI+ ++ KTY++NF + + GDI +I + Sbjct: 19 YRMIDLFAGIGGTRLGFHLTGE---VKVVFSSEIDKFAKKTYKSNFSDEPL-GDIREINS 74 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIP+HD+L+AGFPCQ FSQAG Sbjct: 75 EDIPNHDILVAGFPCQAFSQAG 96 >gi|159027151|emb|CAO86782.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 347 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M DLF GIGG R+ LE + +C FSSEI+P+S K Y AN+ + DI K++ Sbjct: 1 MWTFIDLFAGIGGFRIALE----NLGCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKLE 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + +PDHD+L GFPCQ FS AG Sbjct: 57 AKTVPDHDILCGGFPCQAFSIAG 79 >gi|170729237|ref|YP_001763263.1| DNA-cytosine methyltransferase [Shewanella woodyi ATCC 51908] gi|169814584|gb|ACA89168.1| DNA-cytosine methyltransferase [Shewanella woodyi ATCC 51908] Length = 416 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 45/82 (54%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG+RL +Q + C FSSE + ++ TYQ N L FGDI I Sbjct: 96 FKFIDLFAGIGGVRLGFQQ----NDGACVFSSEFDKHAQATYQTNHG-ELPFGDITAINP 150 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHDVLLAGFPCQPFS AG Sbjct: 151 THIPDHDVLLAGFPCQPFSHAG 172 >gi|321310755|ref|YP_004193084.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str. Langford 1] gi|319802599|emb|CBY93245.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str. Langford 1] Length = 362 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K+ DLF GIGG RL +T V FSSEI+ +S+KTY+ANF T GDI KI + Sbjct: 55 YKMIDLFAGIGGTRLGFYKTGK---VNVVFSSEIDKFSIKTYKANFGETPS-GDITKIGS 110 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIPDHD+L+ GFPCQ FSQAG Sbjct: 111 EDIPDHDILVGGFPCQSFSQAG 132 >gi|152998369|ref|YP_001343204.1| DNA-cytosine methyltransferase [Marinomonas sp. MWYL1] gi|150839293|gb|ABR73269.1| DNA-cytosine methyltransferase [Marinomonas sp. MWYL1] Length = 417 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF GIGG+RL +Q C FSSE + ++ TY+ N FGDI I Sbjct: 96 FRFIDLFAGIGGVRLGFQQA----GGTCVFSSEFDKHAQLTYKKNHG-EFPFGDITLISP 150 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IP HDVLLAGFPCQPFS AG Sbjct: 151 ESIPAHDVLLAGFPCQPFSHAG 172 >gi|323650700|gb|ADX97434.1| M2.BspACI [Bacillus psychrodurans] Length = 444 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LKI LF GIGG LE++ + + + FSSEI+ ++ +Y+ANFPN + GDI KI Sbjct: 86 LKIVSLFSGIGGFEAGLEES--NVSGKIVFSSEIDRFAKISYEANFPNHNLHGDITKIDA 143 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +D+P+HD+L+ GFPCQ FS AG Sbjct: 144 KDVPNHDLLIGGFPCQAFSIAG 165 >gi|308126237|ref|ZP_05908633.2| DNA (cytosine-5-)-methyltransferase [Vibrio parahaemolyticus AQ4037] gi|308107574|gb|EFO45114.1| DNA (cytosine-5-)-methyltransferase [Vibrio parahaemolyticus AQ4037] Length = 426 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 44/82 (53%), Positives = 53/82 (64%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGGIRL ++ +C F+SEI+ ++ +TY ANF GDI KI Sbjct: 85 FTFIDLFAGIGGIRLPFQE----VGGKCVFTSEIDKFAQQTYLANFG-EYPKGDITKISA 139 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIP+HDVLLAGFPCQ FSQAG Sbjct: 140 SDIPNHDVLLAGFPCQAFSQAG 161 >gi|317501747|ref|ZP_07959934.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|316896869|gb|EFV18953.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium 8_1_57FAA] Length = 499 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 45/84 (53%), Positives = 56/84 (66%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ++ DLF G+GGIRL E+ +E C FSSEI Y++K YQ F N ++GDI +I Sbjct: 67 IRFIDLFAGLGGIRLGFEEGLREVGLEAKCVFSSEIKKYAIKAYQGYFGNEKVYGDITQI 126 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T IPD D LLAGFPCQPFS AG Sbjct: 127 ETDTIPDFDFLLAGFPCQPFSSAG 150 >gi|308229518|gb|ADO24171.1| M.AciI [Arthrobacter citreus] Length = 703 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 55/82 (67%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K+ LF GIGG L L+ ++ + FSSEI+ ++ ++Y ANFPN + GDI KI Sbjct: 22 YKVVSLFSGIGGFELGLK--YSSLSSHVIFSSEIDKFAQQSYLANFPNHNLVGDITKIDE 79 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 Q+IPDHD+L+ GFPCQ FS AG Sbjct: 80 QEIPDHDILMGGFPCQAFSIAG 101 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGG RL LE+ C FSS+I+ Y+ +TY NF GDI KI + Sbjct: 385 FSFIDLFSGIGGFRLALEK----NGGTCLFSSDIDKYARETYFNNFGEMPS-GDITKIAS 439 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++IP HD+L AGFPCQPFS AG Sbjct: 440 ENIPFHDILCAGFPCQPFSIAG 461 >gi|224418923|ref|ZP_03656929.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT 98-5491] gi|253827874|ref|ZP_04870759.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT 98-5491] gi|313142438|ref|ZP_07804631.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT 98-5491] gi|253511280|gb|EES89939.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT 98-5491] gi|313131469|gb|EFR49086.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT 98-5491] Length = 328 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 40/82 (48%), Positives = 48/82 (58%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGGIR E C FSSEI+ ++ +TY+AN+ GDI KI+ Sbjct: 23 YTFIDLFAGIGGIRRGFE----IEGGTCVFSSEIDKFACQTYEANWGEKPS-GDITKIEA 77 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIP D+LL GFPCQ FS AG Sbjct: 78 CDIPKFDILLGGFPCQAFSIAG 99 >gi|118138268|pdb|2I9K|A Chain A, Engineered Extrahelical Base Destabilization Enhances Sequence Discrimination Of Dna Methyltransferase M.Hhai Length = 327 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|1171048|sp|P25263|MTC1_HERAU RecName: Full=Modification methylase HgiCI; Short=M.HgiCI; AltName: Full=Cytosine-specific methyltransferase HgiCI gi|515372|emb|CAA38933.1| methyltransferase [Herpetosiphon aurantiacus] Length = 420 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 45/85 (52%), Positives = 53/85 (62%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 MLK DLF GIGG+RL EQ + +E C SSEI+ ++ TY NF + GDI + Sbjct: 1 MLKFIDLFAGIGGMRLGFEQAMHELGIETACVLSSEIDKHAQTTYAMNF-HEQSQGDITQ 59 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I QD P D LLAGFPCQPFS AG Sbjct: 60 I--QDFPSFDFLLAGFPCQPFSYAG 82 >gi|256822924|ref|YP_003146887.1| DNA-cytosine methyltransferase [Kangiella koreensis DSM 16069] gi|256796463|gb|ACV27119.1| DNA-cytosine methyltransferase [Kangiella koreensis DSM 16069] Length = 419 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGGIRL ++ C FSSE + TY+ NF FGDI + + Sbjct: 97 FTFIDLFAGIGGIRLGFQK----YGGACVFSSEFEKAAQNTYKENFGEHP-FGDITTVPS 151 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++IP HD+LL GFPCQ FS AG Sbjct: 152 ENIPKHDILLGGFPCQAFSVAG 173 >gi|269123998|ref|YP_003306575.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] gi|268315324|gb|ACZ01698.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] Length = 438 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 45/84 (53%), Positives = 55/84 (65%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+GGIR+ EQ FN + EC FSSEI +++ +Y F + I GDI +I Sbjct: 17 IKFIDLFAGLGGIRIGFEQAFNTLGISTECVFSSEIKKHAILSYTKYFGDYKIHGDIKEI 76 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 DIPD D LLAGFPCQPFS AG Sbjct: 77 SVDDIPDFDFLLAGFPCQPFSSAG 100 >gi|17863973|gb|AAL46998.1|AF448250_2 putative C-5 cytosine-specific DNA methylase [Bacteroides coprosuis DSM 18011] Length = 401 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 47/82 (57%), Positives = 56/82 (68%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIRL + EC FSSEI+ ++ KTY +N+ + GDI KIK Sbjct: 74 FKFIDLFAGIGGIRLPFQ----LNGGECVFSSEIDYHAQKTYYSNYGDYPS-GDITKIKA 128 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIPDHD+LLAGFPCQ FSQAG Sbjct: 129 EDIPDHDILLAGFPCQAFSQAG 150 >gi|56461628|ref|YP_156909.1| DNA cytosine methylase [Idiomarina loihiensis L2TR] gi|56180638|gb|AAV83360.1| DNA cytosine methylase [Idiomarina loihiensis L2TR] Length = 419 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF G+GGIRL E+ C FSSEI+ ++ TY N T+ +GDI KI Sbjct: 99 IKFIDLFAGVGGIRLAFEKA----GAACVFSSEIDTHAQLTYFTNHG-TVPYGDITKIDA 153 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP HD+L AGFPCQPFS G Sbjct: 154 DSIPSHDILCAGFPCQPFSHIG 175 >gi|119493789|ref|ZP_01624358.1| type II restriction enzyme HaeII [Lyngbya sp. PCC 8106] gi|119452484|gb|EAW33671.1| type II restriction enzyme HaeII [Lyngbya sp. PCC 8106] Length = 689 Score = 134 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 40/82 (48%), Positives = 48/82 (58%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGGIRL E+ +C FSSE + + +TY+ANF + GDI I Sbjct: 10 FTFIDLFAGIGGIRLPFEE----LGGKCVFSSEWDEAAQETYEANFGERPL-GDITTIDP 64 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP HD+LLAGFPCQ FS G Sbjct: 65 GSIPHHDILLAGFPCQAFSIIG 86 >gi|262402975|ref|ZP_06079535.1| DNA-methyltransferase MKpn2kI [Vibrio sp. RC586] gi|262350474|gb|EEY99607.1| DNA-methyltransferase MKpn2kI [Vibrio sp. RC586] Length = 410 Score = 134 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGGIRL ++ H C F+SE + ++ KTY AN+ GDI +I Sbjct: 53 FTFIDLFAGIGGIRLPFQKLNGH----CVFTSEWDKFAQKTYLANYGEMPS-GDITQISA 107 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DI DHD+LL GFPCQ FSQAG Sbjct: 108 KDIKDHDILLGGFPCQAFSQAG 129 >gi|161761159|pdb|2ZCJ|A Chain A, Ternary Structure Of The Glu119gln M.Hhai, C5-Cytosine Dna Methyltransferase, With Unmodified Dna And Adohcy Length = 327 Score = 134 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|127455|sp|P05102|MTH1_HAEPH RecName: Full=Modification methylase HhaI; Short=M.HhaI; AltName: Full=Cytosine-specific methyltransferase HhaI gi|1065144|pdb|1MHT|A Chain A, Covalent Ternary Structure Of Hhai Methyltransferase, Dna And S-Adenosyl-L-Homocysteine gi|1942412|pdb|3MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Unmodified Dna And Adohcy gi|1942415|pdb|4MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Native Dna And Adohcy gi|2392799|pdb|5MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Hemimethylated Dna And Adohcy gi|3660437|pdb|6MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Adohcy And Dna Containing 4'-Thio-2'deoxycytidine At The Target gi|4139672|pdb|7MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX gi|4139675|pdb|8MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX gi|4139680|pdb|9MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX gi|4558252|pdb|10MH|A Chain A, Ternary Structure Of Hhai Methyltransferase With Adohcy And Hemimethylated Dna Containing 5,6-Dihydro-5-Azacytosine At The Target gi|4699814|pdb|2HMY|B Chain B, Binary Complex Of Hhai Methyltransferase With Adomet Formed In The Presence Of A Short Nonpsecific Dna Oligonucleotide gi|24158912|pdb|1M0E|A Chain A, Zebularine: A Novel Dna Methylation Inhibitor That Forms A Covalent Complex With Dna Methyltransferase gi|52695513|pdb|1SKM|A Chain A, Hhai Methyltransferase In Complex With Dna Containing An Abasic South Carbocyclic Sugar At Its Target Site gi|85544385|pdb|2C7O|A Chain A, Hhai Dna Methyltransferase Complex With 13mer Oligonucleotide Containing 2-Aminopurine Adjacent To The Target Base (Pcgc:gmgc) And Sah gi|85544388|pdb|2C7P|A Chain A, Hhai Dna Methyltransferase Complex With Oligonucleotide Containing 2-Aminopurine Opposite To The Target Base ( Gcgc:gmpc) And Sah gi|85544391|pdb|2C7Q|A Chain A, Hhai Dna Methyltransferase Complex With Oligonucleotide Containing 2-Aminopurine Outside The Recognition Sequence (Paired With G) And Sah gi|116667789|pdb|2HR1|A Chain A, Ternary Structure Of Wt M.Hhai C5-Cytosine Dna Methyltransferase With Unmodified Dna And Adohcy gi|157831356|pdb|1HMY|A Chain A, Crystal Structure Of The Hhal Dna Methyltransferase Complexed With S-Adenosyl-L-Methionine gi|290560089|pdb|3EEO|A Chain A, M. Hhai Co-Crystallized With Synthetic Dsdna Containing A Propane Diol In Place Of The Deoxycytidine Residue Targeted For Methylation. gi|148949|gb|AAA24989.1| DNA methylase [Haemophilus haemolyticus] Length = 327 Score = 134 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|160877870|pdb|2Z6U|A Chain A, Ternary Structure Of The Glu119ala M.Hhai, C5-Cytosine Dna Methyltransferase, With Unmodified Dna And Adohcy Length = 327 Score = 134 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|255066464|ref|ZP_05318319.1| modification methylase EcoRII [Neisseria sicca ATCC 29256] gi|298369378|ref|ZP_06980696.1| modification methylase EcoRII [Neisseria sp. oral taxon 014 str. F0314] gi|255049344|gb|EET44808.1| modification methylase EcoRII [Neisseria sicca ATCC 29256] gi|298283381|gb|EFI24868.1| modification methylase EcoRII [Neisseria sp. oral taxon 014 str. F0314] Length = 357 Score = 134 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 43/82 (52%), Positives = 54/82 (65%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF GIGGIRL E+ +C FSSEI+ ++ TYQA + + GDI +I Sbjct: 50 FRFIDLFAGIGGIRLPFEE----LGGQCVFSSEIDKFAKTTYQAFYGDVP-HGDITQIAP 104 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +IPD D+LLAGFPCQPFSQAG Sbjct: 105 SEIPDFDLLLAGFPCQPFSQAG 126 >gi|50513617|pdb|1SVU|A Chain A, Structure Of The Q237w Mutant Of Hhai Dna Methyltransferase: An Insight Into Protein-Protein Interactions gi|50513618|pdb|1SVU|B Chain B, Structure Of The Q237w Mutant Of Hhai Dna Methyltransferase: An Insight Into Protein-Protein Interactions Length = 327 Score = 134 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|189339547|pdb|2UZ4|A Chain A, Hhai Dna Methyltransferase R165n Mutant Complex With 13mer Gcgc-Gmgc Oligonucleotide And Sah Length = 327 Score = 134 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|189096047|pdb|2UYC|A Chain A, Hhai Dna Methyltransferase R163n Mutant Complex With 13mer Gcgc-Gmgc Oligonucleotide And Sah Length = 327 Score = 134 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|158431504|pdb|2Z6Q|A Chain A, Ternary Structure Of Arg165ala M.Hhai C5-Cytosine Dna Methyltransferase With Unmodified Dna And Adohcy Length = 327 Score = 134 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|1709152|sp|P50185|MTD5_DACSA RecName: Full=Modification methylase DsaV; Short=M.DsaV; AltName: Full=Cytosine-specific methyltransferase DsaV gi|505694|gb|AAA86046.1| DsaV methyltransferase [Dactylococcopsis salina] Length = 351 Score = 134 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 42/82 (51%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF GIGG+R+ E+ +C FSSEI+ + +TY+ANF GDI K+ Sbjct: 6 LKFIDLFAGIGGMRIPFEE----LGGKCVFSSEIDKHCQRTYEANFGEMPT-GDITKLSA 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP HD+LLAGFPCQ FSQ G Sbjct: 61 DSIPYHDLLLAGFPCQAFSQGG 82 >gi|166368121|ref|YP_001660394.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa NIES-843] gi|166090494|dbj|BAG05202.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa NIES-843] Length = 347 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M DLF G+GG R+ LE + +C FSSEI+P+S K Y AN+ + DI K++ Sbjct: 1 MWTFIDLFAGVGGFRIALE----NLGCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKLE 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + +PDHD+L GFPCQ FS AG Sbjct: 57 AKTVPDHDILCGGFPCQAFSIAG 79 >gi|12084381|pdb|1FJX|A Chain A, Structure Of Ternary Complex Of Hhai Methyltransferase Mutant (T250g) In Complex With Dna And Adohcy gi|85544394|pdb|2C7R|A Chain A, Hhai Dna Methyltransferase (T250g Mutant) Complex With Oligonucleotide Containing 2-Aminopurine As A Target Base (Gpgc:gmgc) And Sah Length = 327 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS +G Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88 >gi|300869073|ref|ZP_07113674.1| Cytosine-specific methyltransferase (fragment) [Oscillatoria sp. PCC 6506] gi|300332930|emb|CBN58870.1| Cytosine-specific methyltransferase (fragment) [Oscillatoria sp. PCC 6506] Length = 345 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGG R E EC FS E++ + + Y NF N + FGDI + Sbjct: 1 MKFIDLFAGIGGFRQGFENA----GFECVFSCEVDKHCREVYSNNF-NEVPFGDIKDVNP 55 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +I D DVL+AGFPCQPFS G Sbjct: 56 HEIEDFDVLVAGFPCQPFSICG 77 >gi|189096062|pdb|2UYH|A Chain A, Hhai Dna Methyltransferase S87q-Q237s Mutant Complex With 13mer Gcgc-Gmgc Oligonucleotide And Sah Length = 327 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFPCQ FS G Sbjct: 67 KTIPDHDILCAGFPCQAFSIQG 88 >gi|294661528|ref|YP_003579981.1| hypothetical protein KP-KP15_gp115 [Klebsiella phage KP15] gi|292660689|gb|ADE34937.1| hypothetical protein [Klebsiella phage KP15] Length = 308 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI DL G+GG+RL ++ F VEC +SEI+ ++ +TY N+ + I GDI I Sbjct: 1 MKIIDLCAGVGGVRLGFDKAFG--GVECLLTSEIDKHAQQTYADNWGDENIQGDIFTIDE 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+PDHD+LLAGFPCQ FS+AG Sbjct: 59 NDVPDHDILLAGFPCQAFSKAG 80 >gi|255279955|ref|ZP_05344510.1| modification methylase EcoRII [Bryantella formatexigens DSM 14469] gi|255269728|gb|EET62933.1| modification methylase EcoRII [Bryantella formatexigens DSM 14469] Length = 311 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIGG+ + ++++ + Y+V+TY+ANF ++ GDI +I Sbjct: 1 MKVVSLFSGIGGLDRGF----LDTGYDVIWANDFDKYAVQTYKANFGEHIVLGDINEIPL 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +IPD DVL+ GFPCQPFS G Sbjct: 57 DEIPDCDVLIGGFPCQPFSMMG 78 >gi|229126345|ref|ZP_04255362.1| Cytosine-specific methyltransferase [Bacillus cereus BDRD-Cer4] gi|228657116|gb|EEL12937.1| Cytosine-specific methyltransferase [Bacillus cereus BDRD-Cer4] Length = 363 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ LF G GG+ L LEQ E ++++++ ++V+ Y+ N ++ GDI KI Sbjct: 8 LKVVSLFSGCGGLDLGLEQA----GFEILWANDVDKHAVEIYKHNIG-KIVEGDITKISE 62 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++IP DVL AGFPCQPFS AG Sbjct: 63 EEIPSCDVLTAGFPCQPFSSAG 84 >gi|167746073|ref|ZP_02418200.1| hypothetical protein ANACAC_00768 [Anaerostipes caccae DSM 14662] gi|167654588|gb|EDR98717.1| hypothetical protein ANACAC_00768 [Anaerostipes caccae DSM 14662] Length = 312 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ LFCG GG+ ++T ++++ + Y+V+TY+ANF + +I GDI +I+ Sbjct: 1 MRVLSLFCGCGGLDKGFDET----GYNIVWANDFDKYAVETYKANFGDNVILGDINEIEL 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +P+ DVL+ GFPCQPFS G Sbjct: 57 NSLPEFDVLIGGFPCQPFSMMG 78 >gi|255262721|ref|ZP_05342063.1| cytosine-specific methyltransferase NlaX [Thalassiobium sp. R2A62] gi|255105056|gb|EET47730.1| cytosine-specific methyltransferase NlaX [Thalassiobium sp. R2A62] Length = 421 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 42/82 (51%), Positives = 53/82 (64%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF GIGGIR+ ++ H C FSSE + +S K+Y AN+ GDI +I Sbjct: 80 FRFIDLFAGIGGIRMPFQELGGH----CVFSSEWDKFSQKSYAANYGEVPQ-GDITQIAA 134 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIP+HD+LLAGFPCQ FSQAG Sbjct: 135 NDIPEHDLLLAGFPCQAFSQAG 156 >gi|126658057|ref|ZP_01729209.1| DNA cytosine methylase [Cyanothece sp. CCY0110] gi|126620695|gb|EAZ91412.1| DNA cytosine methylase [Cyanothece sp. CCY0110] Length = 358 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 DLF GIGG+R+ ++++ +C FSSE + Y+ +TYQ NF FGDI KI QDIP Sbjct: 44 DLFAGIGGMRMGFSRSYS----QCVFSSEWDKYAQQTYQFNFGEKP-FGDINKINPQDIP 98 Query: 66 DHDVLLAGFPCQPFSQAG 83 DHD+L+ GFPCQPFS G Sbjct: 99 DHDILIGGFPCQPFSTIG 116 >gi|124024750|ref|YP_001013866.1| site-specific DNA methylase [Prochlorococcus marinus str. NATL1A] gi|123959818|gb|ABM74601.1| Site-specific DNA methylase [Prochlorococcus marinus str. NATL1A] Length = 305 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 44/82 (53%), Positives = 53/82 (64%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF GIGGIR+ E+ EC FSSE + YS TY+ANF + GDI KI Sbjct: 5 FRFIDLFAGIGGIRIPFEE----LGGECVFSSEWDKYSQITYEANFG-EIPKGDITKINA 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIP HD+L+ GFPCQ FSQAG Sbjct: 60 EDIPKHDLLVGGFPCQAFSQAG 81 >gi|219724141|ref|YP_002477179.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Borrelia burgdorferi 156a] gi|225575842|ref|YP_002724642.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 118a] gi|219693145|gb|ACL34349.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Borrelia burgdorferi 156a] gi|225546742|gb|ACN92742.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 118a] Length = 311 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLFCGIGG R+ L++ + +EC FS +I+ Y+ YQ NF + +GD+ +I Sbjct: 1 MFKFIDLFCGIGGFRVALQK----QGMECVFSCDIDKYAQTAYQKNFGDKP-YGDVTEIP 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IP H++L AGFPCQPFS +G Sbjct: 56 EDKIPRHEILCAGFPCQPFSISG 78 >gi|187923141|ref|YP_001894783.1| DNA-cytosine methyltransferase [Burkholderia phytofirmans PsJN] gi|187714335|gb|ACD15559.1| DNA-cytosine methyltransferase [Burkholderia phytofirmans PsJN] Length = 426 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAK 58 + DLF GIGGIR+ E +C F+SE N +S KTY+ N+P + GDI Sbjct: 71 FRFIDLFAGIGGIRMGFEA----HGGDCVFTSEWNDFSTKTYRENYPGGGEHALIGDIVS 126 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 +D+P HDVLL GFPCQPFS AG Sbjct: 127 FPAEDVPSHDVLLGGFPCQPFSIAG 151 >gi|254410261|ref|ZP_05024041.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196183297|gb|EDX78281.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 384 Score = 133 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 40/82 (48%), Positives = 48/82 (58%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF GIGG R+ EQT +C +S EI+P + Y NF + GDI +I Sbjct: 4 IKFIDLFAGIGGFRIAFEQT----GYKCVYSCEIDPKCQEVYFNNFLDKP-AGDIREIDI 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPD DVL AGFPCQPFS G Sbjct: 59 NSIPDFDVLTAGFPCQPFSICG 80 >gi|227485931|ref|ZP_03916247.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC 51172] gi|227235976|gb|EEI85991.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC 51172] Length = 318 Score = 133 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLFCGIGG R+ E + +C FSS+I+ Y+ +TY NF GDI K+ Sbjct: 1 MYKFIDLFCGIGGFRIAFE----NLGCKCVFSSDIDVYARETYNDNFG-EYPAGDIIKVD 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + IP+HD+L AGFPCQPFS AG Sbjct: 56 AETIPNHDILCAGFPCQPFSIAG 78 >gi|309808410|ref|ZP_07702309.1| putative modification methylase HhaI [Lactobacillus iners LactinV 01V1-a] gi|308168238|gb|EFO70357.1| putative modification methylase HhaI [Lactobacillus iners LactinV 01V1-a] Length = 198 Score = 133 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL LE +C +S+E + ++ +TY NF +T GDI ++ Sbjct: 12 YKFIDLFAGIGGFRLALES----FGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS +G Sbjct: 67 TRIPDHDILCAGFPCQPFSISG 88 >gi|30019096|ref|NP_830727.1| Type II restriction-modification system methylation subunit [Bacillus cereus ATCC 14579] gi|29894639|gb|AAP07928.1| Type II restriction-modification system methylation subunit [Bacillus cereus ATCC 14579] Length = 373 Score = 132 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ LF G GG+ L LEQ E ++++++ ++V+ Y+ N ++ GDI KI Sbjct: 18 LKVVSLFSGCGGLDLGLEQA----GFEILWANDVDKHAVEIYKHNIG-KIVEGDITKISE 72 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++IP DVL AGFPCQPFS AG Sbjct: 73 EEIPSCDVLTAGFPCQPFSSAG 94 >gi|153870185|ref|ZP_01999636.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] gi|152073352|gb|EDN70367.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] Length = 235 Score = 132 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 40/82 (48%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF GIGGIRL E +C FSSE + Y+ TY+ANF GDI KI Sbjct: 4 FEFIDLFAGIGGIRLGFES----IGGKCVFSSEWDKYAQDTYEANFGERP-EGDITKINA 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IP+H++LL GFPCQ FS G Sbjct: 59 KTIPEHNILLGGFPCQAFSICG 80 >gi|118576810|ref|YP_876553.1| C-5 cytosine-specific DNA methylase [Cenarchaeum symbiosum A] gi|118195331|gb|ABK78249.1| C-5 cytosine-specific DNA methylase [Cenarchaeum symbiosum A] Length = 325 Score = 132 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLFCGIGG+R+ LE+ C +S EIN + KTY+ANF + DI ++ Sbjct: 5 IRFIDLFCGIGGMRIGLERA----GGRCVYSCEINEPARKTYEANF-EPVTDKDITEVDA 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP+HDVL AGFPCQPFS AG Sbjct: 60 GSIPNHDVLAAGFPCQPFSLAG 81 >gi|288559284|ref|YP_003422770.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1] gi|288541994|gb|ADC45878.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1] Length = 339 Score = 132 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGG RL E +C FSS+I+ ++ +TY NF GDI++I Sbjct: 30 FTFIDLFSGIGGFRLAFES----VGGKCVFSSDIDKWANETYYMNFG-EYPHGDISEIPA 84 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS G Sbjct: 85 NQIPDHDILCAGFPCQPFSIGG 106 >gi|293363234|ref|ZP_06610118.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma alligatoris A21JP2] gi|292553093|gb|EFF41842.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma alligatoris A21JP2] Length = 428 Score = 132 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+GGIR+ EQ + + EC F+SEI +++K Y+ NF ++ I GDI+KI Sbjct: 13 IKFIDLFAGLGGIRIGFEQALKDKKIKSECVFTSEIKKHAIKAYKNNFKDSNINGDISKI 72 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + IP D LLAGFPCQPFS AG Sbjct: 73 DLEKIPYFDYLLAGFPCQPFSSAG 96 >gi|224796590|ref|YP_002641667.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 64b] gi|223929176|gb|ACN23896.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 64b] gi|312149869|gb|ADQ29935.1| DNA-cytosine methyltransferase [Borrelia burgdorferi N40] Length = 324 Score = 132 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLFCGIGG R+ L++ + +EC FS +I+ Y+ YQ NF + +GD+ +I Sbjct: 14 MFKFIDLFCGIGGFRVALQK----QGMECVFSCDIDKYAQTAYQKNFGDKP-YGDVTEIP 68 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IP H++L AGFPCQPFS +G Sbjct: 69 EDKIPRHEILCAGFPCQPFSISG 91 >gi|319776347|ref|YP_004138835.1| Cytosine-specific methyltransferase [Haemophilus influenzae F3047] gi|329123500|ref|ZP_08252064.1| modification methylase HaeII [Haemophilus aegyptius ATCC 11116] gi|317450938|emb|CBY87164.1| Cytosine-specific methyltransferase [Haemophilus influenzae F3047] gi|327471082|gb|EGF16537.1| modification methylase HaeII [Haemophilus aegyptius ATCC 11116] Length = 318 Score = 132 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 44/82 (53%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIRL E + FSSE + Y+ Y+ NF FGDI I Sbjct: 4 YKTIDLFAGIGGIRLGFEA----FGCKNVFSSEWDKYAQSMYEVNFGEKP-FGDINDISP 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 59 SDIPDHDILLAGFPCQPFSIAG 80 >gi|12229852|sp|O30868|MTH2_HAEAE RecName: Full=Modification methylase HaeII; Short=M.HaeII; AltName: Full=Cytosine-specific methyltransferase HaeII gi|2425087|gb|AAB70829.1| HaeII methylase [Haemophilus aegyptius ATCC 11116] Length = 318 Score = 132 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 44/82 (53%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIRL E + FSSE + Y+ Y+ NF FGDI I Sbjct: 4 YKTIDLFAGIGGIRLGFEA----FGCKNVFSSEWDKYAQSMYEVNFGEKP-FGDINDISP 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 59 SDIPDHDILLAGFPCQPFSIAG 80 >gi|148826843|ref|YP_001291596.1| modification methylase HaeII [Haemophilus influenzae PittGG] gi|148718085|gb|ABQ99212.1| modification methylase HaeII [Haemophilus influenzae PittGG] Length = 318 Score = 132 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 44/82 (53%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIRL E + FSSE + Y+ Y+ NF FGDI I Sbjct: 4 YKTIDLFAGIGGIRLGFEA----FGCKNVFSSEWDKYAQSMYEVNFGEKP-FGDINDISP 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 59 SDIPDHDILLAGFPCQPFSIAG 80 >gi|68250112|ref|YP_249224.1| modification methylase HaeII [Haemophilus influenzae 86-028NP] gi|68058311|gb|AAX88564.1| modification methylase HaeII [Haemophilus influenzae 86-028NP] Length = 318 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 44/82 (53%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIRL E + FSSE + Y+ Y+ NF FGDI I Sbjct: 4 YKTIDLFAGIGGIRLGFEA----FGCKNVFSSEWDKYAQSMYEVNFGEKP-FGDINDISP 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 59 SDIPDHDILLAGFPCQPFSIAG 80 >gi|296159065|ref|ZP_06841892.1| DNA-cytosine methyltransferase [Burkholderia sp. Ch1-1] gi|295890626|gb|EFG70417.1| DNA-cytosine methyltransferase [Burkholderia sp. Ch1-1] Length = 426 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAK 58 + DLF GIGGIR+ E +C F+SE N +S KTY+ N+P + GDI Sbjct: 71 FRFIDLFAGIGGIRMGFEA----HGGDCVFTSEWNDFSTKTYRENYPGDGEHALIGDIVS 126 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 +++P HDVLL GFPCQPFS AG Sbjct: 127 FPAEEVPGHDVLLGGFPCQPFSIAG 151 >gi|294788070|ref|ZP_06753314.1| modification methylase EcoRII [Simonsiella muelleri ATCC 29453] gi|294484363|gb|EFG32046.1| modification methylase EcoRII [Simonsiella muelleri ATCC 29453] Length = 355 Score = 132 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 58/82 (70%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF G+GGIR +Q F R +E FSSEI+ ++ +TY AN+ + + +GDI +I+ Sbjct: 41 LKAIDLFAGVGGIRTGFQQAFGER-IEFVFSSEIDKFARQTYAANY-HEIPYGDITQIQA 98 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++P HD++LAGFPCQ FS AG Sbjct: 99 HEVPTHDIILAGFPCQAFSVAG 120 >gi|15676920|ref|NP_274067.1| modification methylase NlaIV [Neisseria meningitidis MC58] gi|7226272|gb|AAF41432.1| modification methylase NlaIV [Neisseria meningitidis MC58] gi|325136241|gb|EGC58849.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579] gi|325202033|gb|ADY97487.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149] gi|325208214|gb|ADZ03666.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis NZ-05/33] Length = 423 Score = 132 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|154484133|ref|ZP_02026581.1| hypothetical protein EUBVEN_01844 [Eubacterium ventriosum ATCC 27560] gi|149735175|gb|EDM51061.1| hypothetical protein EUBVEN_01844 [Eubacterium ventriosum ATCC 27560] Length = 366 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 2/83 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 + DLF GIGGIR + F +N++ F SE + Y+ KTY+AN+ + I GDI KI Sbjct: 14 YRAIDLFAGIGGIRKGFDNAFG-KNIDTVFVSEWDEYAQKTYRANYKDKFEIAGDITKID 72 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +DIP+ D+ LAGFPCQ FS AG Sbjct: 73 EKDIPEFDICLAGFPCQAFSLAG 95 >gi|167854495|ref|ZP_02477276.1| cyclic 3',5'-adenosine monophosphate phosphodiesterase [Haemophilus parasuis 29755] gi|219872138|ref|YP_002476513.1| DNA-cytosine methyltransferase/C-5 cytosine-specific DNA methylase [Haemophilus parasuis SH0165] gi|167854250|gb|EDS25483.1| cyclic 3',5'-adenosine monophosphate phosphodiesterase [Haemophilus parasuis 29755] gi|219692342|gb|ACL33565.1| DNA-cytosine methyltransferase/C-5 cytosine-specific DNA methylase [Haemophilus parasuis SH0165] Length = 320 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 8/90 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLI-F 53 ++ LF G GG+ L + F+ N E ++++IN + KT + NFP T + Sbjct: 5 FRVISLFSGAGGLDLGFKGGFDFLNKRYDENPFEVVWANDINEKACKTLKHNFPETPVVC 64 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GDI + +P+ DV+L GFPCQ FS AG Sbjct: 65 GDITLVDKSTLPEADVVLGGFPCQDFSLAG 94 >gi|161870123|ref|YP_001599293.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis 053442] gi|225075874|ref|ZP_03719073.1| hypothetical protein NEIFLAOT_00897 [Neisseria flavescens NRL30031/H210] gi|296313674|ref|ZP_06863615.1| DNA (cytosine-5-)-methyltransferase [Neisseria polysaccharea ATCC 43768] gi|161595676|gb|ABX73336.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis 053442] gi|224952820|gb|EEG34029.1| hypothetical protein NEIFLAOT_00897 [Neisseria flavescens NRL30031/H210] gi|296839734|gb|EFH23672.1| DNA (cytosine-5-)-methyltransferase [Neisseria polysaccharea ATCC 43768] Length = 423 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|193216537|ref|YP_001999779.1| cytosine-specific methyltransferase, related to HhaI [Mycoplasma arthritidis 158L3-1] gi|193001860|gb|ACF07075.1| cytosine-specific methyltransferase, related to HhaI [Mycoplasma arthritidis 158L3-1] Length = 327 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF G+GG R+ LE +C +S+E + ++ + Y+ NF N + GDI I Sbjct: 12 LKFIDLFAGLGGFRIALESC----GAKCVYSNEWDKHAQEVYKMNF-NEIPDGDITLINE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHDVL AGFPCQ FS +G Sbjct: 67 NDIPDHDVLCAGFPCQAFSISG 88 >gi|325130383|gb|EGC53149.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304] Length = 425 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|218247578|ref|YP_002372949.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|218168056|gb|ACK66793.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] Length = 727 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 44/82 (53%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL EQ +C +S EIN Y K Y NF D+ KI Sbjct: 6 FKFIDLFAGIGGFRLAFEQA----QYQCVYSCEINEYCQKVYYNNFDECPD-NDVTKINP 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +P+ DVL AGFPCQPFS G Sbjct: 61 HTLPNFDVLTAGFPCQPFSICG 82 >gi|56751653|ref|YP_172354.1| hypothetical protein syc1644_d [Synechococcus elongatus PCC 6301] gi|81301269|ref|YP_401477.1| DNA-cytosine methyltransferase [Synechococcus elongatus PCC 7942] gi|56686612|dbj|BAD79834.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81170150|gb|ABB58490.1| DNA-cytosine methyltransferase [Synechococcus elongatus PCC 7942] Length = 424 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 DLF GIGG R+ E+ +C F+SE + + KTY+ANF I GDI +I Sbjct: 71 FTFIDLFAGIGGTRMGFERA----GGKCVFTSEWDTSAQKTYRANFSVDEHPIIGDIHEI 126 Query: 60 KTQD----IPDHDVLLAGFPCQPFSQAG 83 + +P+HDVL+AGFPCQPFS AG Sbjct: 127 TVEGKWDLLPEHDVLVAGFPCQPFSIAG 154 >gi|240128365|ref|ZP_04741026.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae SK-93-1035] gi|268686763|ref|ZP_06153625.1| DNA modification methylase [Neisseria gonorrhoeae SK-93-1035] gi|268627047|gb|EEZ59447.1| DNA modification methylase [Neisseria gonorrhoeae SK-93-1035] Length = 423 Score = 131 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|254673505|emb|CBA08927.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha275] Length = 273 Score = 131 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|304387455|ref|ZP_07369646.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|304338548|gb|EFM04667.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] Length = 273 Score = 131 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|189439219|ref|YP_001954300.1| site-specific DNA methylase [Bifidobacterium longum DJO10A] gi|189427654|gb|ACD97802.1| Site-specific DNA methylase [Bifidobacterium longum DJO10A] Length = 323 Score = 131 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 43/83 (51%), Positives = 56/83 (67%), Gaps = 2/83 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 ++I DLF GIGGIR+ + Q +SSE N YSV+TY+AN+ + + GDI K+ Sbjct: 4 IRIADLFAGIGGIRMGMVQALGDA-AHVVYSSEWNKYSVQTYEANWHDENPVAGDITKVD 62 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D+LLAGFPCQPFS AG Sbjct: 63 EHDVPDIDLLLAGFPCQPFSIAG 85 >gi|59801103|ref|YP_207815.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae FA 1090] gi|121634967|ref|YP_975212.1| DNA modification methylase [Neisseria meningitidis FAM18] gi|194098793|ref|YP_002001855.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae NCCP11945] gi|239999085|ref|ZP_04719009.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae 35/02] gi|240014008|ref|ZP_04720921.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae DGI18] gi|240016449|ref|ZP_04722989.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae FA6140] gi|240080568|ref|ZP_04725111.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae FA19] gi|240113063|ref|ZP_04727553.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae MS11] gi|240115818|ref|ZP_04729880.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae PID18] gi|240118116|ref|ZP_04732178.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae PID1] gi|240121574|ref|ZP_04734536.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae PID24-1] gi|240123666|ref|ZP_04736622.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae PID332] gi|240125856|ref|ZP_04738742.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae SK-92-679] gi|254493863|ref|ZP_05107034.1| DNA modification methylase [Neisseria gonorrhoeae 1291] gi|260440365|ref|ZP_05794181.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae DGI2] gi|268594923|ref|ZP_06129090.1| DNA modification methylase [Neisseria gonorrhoeae 35/02] gi|268596698|ref|ZP_06130865.1| DNA modification methylase [Neisseria gonorrhoeae FA19] gi|268599147|ref|ZP_06133314.1| DNA modification methylase [Neisseria gonorrhoeae MS11] gi|268601493|ref|ZP_06135660.1| DNA modification methylase [Neisseria gonorrhoeae PID18] gi|268603831|ref|ZP_06137998.1| DNA modification methylase [Neisseria gonorrhoeae PID1] gi|268682295|ref|ZP_06149157.1| DNA modification methylase [Neisseria gonorrhoeae PID332] gi|268684453|ref|ZP_06151315.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679] gi|291043662|ref|ZP_06569378.1| DNA modification methylase [Neisseria gonorrhoeae DGI2] gi|293398965|ref|ZP_06643130.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|59717998|gb|AAW89403.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae FA 1090] gi|120866673|emb|CAM10425.1| DNA modification methylase [Neisseria meningitidis FAM18] gi|193934083|gb|ACF29907.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae NCCP11945] gi|226512903|gb|EEH62248.1| DNA modification methylase [Neisseria gonorrhoeae 1291] gi|268548312|gb|EEZ43730.1| DNA modification methylase [Neisseria gonorrhoeae 35/02] gi|268550486|gb|EEZ45505.1| DNA modification methylase [Neisseria gonorrhoeae FA19] gi|268583278|gb|EEZ47954.1| DNA modification methylase [Neisseria gonorrhoeae MS11] gi|268585624|gb|EEZ50300.1| DNA modification methylase [Neisseria gonorrhoeae PID18] gi|268587962|gb|EEZ52638.1| DNA modification methylase [Neisseria gonorrhoeae PID1] gi|268622579|gb|EEZ54979.1| DNA modification methylase [Neisseria gonorrhoeae PID332] gi|268624737|gb|EEZ57137.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679] gi|291012125|gb|EFE04114.1| DNA modification methylase [Neisseria gonorrhoeae DGI2] gi|291610379|gb|EFF39489.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|317164377|gb|ADV07918.1| putative DNA modification methylase (N.MgoV) [Neisseria gonorrhoeae TCDC-NG08107] Length = 423 Score = 131 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|23466029|ref|NP_696632.1| modification methylase very EcoRII (cytosine-specificmethyltransferase [Bifidobacterium longum NCC2705] gi|23326750|gb|AAN25268.1| modification methylase very similar to EcoRII (cytosine-specificmethyltransferase [Bifidobacterium longum NCC2705] Length = 323 Score = 131 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 43/83 (51%), Positives = 56/83 (67%), Gaps = 2/83 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 ++I DLF GIGGIR+ + Q +SSE N YSV+TY+AN+ + + GDI K+ Sbjct: 4 IRIADLFAGIGGIRMGMVQALGDA-AHVVYSSEWNKYSVQTYEANWHDENPVAGDITKVD 62 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D+LLAGFPCQPFS AG Sbjct: 63 EHDVPDIDLLLAGFPCQPFSIAG 85 >gi|239621327|ref|ZP_04664358.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515788|gb|EEQ55655.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 343 Score = 131 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 43/83 (51%), Positives = 56/83 (67%), Gaps = 2/83 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 ++I DLF GIGGIR+ + Q +SSE N YSV+TY+AN+ + + GDI K+ Sbjct: 24 IRIADLFAGIGGIRMGMVQALGDA-AHVVYSSEWNKYSVQTYEANWHDENPVAGDITKVD 82 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D+LLAGFPCQPFS AG Sbjct: 83 EHDVPDIDLLLAGFPCQPFSIAG 105 >gi|226942156|ref|YP_002797230.1| Cytosine-specific methyltransferase [Laribacter hongkongensis HLHK9] gi|226717083|gb|ACO76221.1| Cytosine-specific methyltransferase [Laribacter hongkongensis HLHK9] Length = 420 Score = 131 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 42/84 (50%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 DLF GIGGIR Q F C F+SE + Y+ KTY N + GDI ++ Sbjct: 71 FTFIDLFAGIGGIR----QAFEDVGGRCVFTSEWDSYAQKTYAENHRRDAHALNGDITQV 126 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 DIP HDVLLAGFPCQPFS AG Sbjct: 127 GAADIPAHDVLLAGFPCQPFSIAG 150 >gi|218768275|ref|YP_002342787.1| DNA modification methylase [Neisseria meningitidis Z2491] gi|121052283|emb|CAM08611.1| DNA modification methylase [Neisseria meningitidis Z2491] Length = 423 Score = 131 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|299536257|ref|ZP_07049570.1| DNA-methyltransferase MKpn2kI [Lysinibacillus fusiformis ZC1] gi|298728243|gb|EFI68805.1| DNA-methyltransferase MKpn2kI [Lysinibacillus fusiformis ZC1] Length = 403 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 5/80 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLF GIGGIRL + + C F+SE + ++ KTY+ANF + GDI KI ++ Sbjct: 74 MIDLFAGIGGIRLAFQSQGGY----CCFTSEWDKFAAKTYRANFGDEPN-GDITKINEKE 128 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 IPDH++LLAGFPCQ FSQAG Sbjct: 129 IPDHNILLAGFPCQAFSQAG 148 >gi|327198092|ref|YP_004306459.1| gp47 [Burkholderia phage KL3] gi|310657226|gb|ADP02340.1| gp47 [Burkholderia phage KL3] Length = 422 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 44/83 (53%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 + DLF GIGGIRL E EC F+SE N +S KTY NF + F GDI Sbjct: 70 FRFIDLFAGIGGIRLGFEA----HGGECVFTSEWNDFSKKTYVDNFGDHHPFIGDIVPFA 125 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + +P HDVLLAGFPCQPFS AG Sbjct: 126 AESVPTHDVLLAGFPCQPFSIAG 148 >gi|159026805|emb|CAO86650.1| ngoBIM [Microcystis aeruginosa PCC 7806] Length = 331 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 3/84 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ++ DLF G+GG RL +EQ +N+E C FS +I+ + Y ANF + GDI +I Sbjct: 10 IRFIDLFSGLGGFRLAIEQVCRPKNLESDCVFSCDIDKDAQAIYHANFGDQPR-GDITEI 68 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 DIP+HD+L+AGFPCQPFS G Sbjct: 69 AALDIPNHDILMAGFPCQPFSICG 92 >gi|238783073|ref|ZP_04627100.1| Modification methylase EcoRII [Yersinia bercovieri ATCC 43970] gi|238716074|gb|EEQ08059.1| Modification methylase EcoRII [Yersinia bercovieri ATCC 43970] Length = 475 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 47/102 (46%), Positives = 56/102 (54%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE NPY+V+TY+AN+ P+ F DI Sbjct: 96 FRFIDLFAGIGGIRKGFEA----IGGQCVFTSEWNPYAVRTYKANWYCDPDEHRFNSDIR 151 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 +I Q IPDHDVLLAGFPCQPFS AG Sbjct: 152 EITLSETAEISDEEAYKYIDQHIPDHDVLLAGFPCQPFSLAG 193 >gi|12229863|sp|Q59605|MTB5_NEIGO RecName: Full=Modification methylase NgoBV; Short=M.NgoBV; AltName: Full=Cytosine-specific methyltransferase NgoBV; Short=M.NgoV gi|1165242|gb|AAA86268.1| M.NgoV DNA methylase [Neisseria gonorrhoeae] Length = 423 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|110643908|ref|YP_671638.1| putative type II 5-cytosoine methyltransferase [Escherichia coli 536] gi|110345500|gb|ABG71737.1| putative type II 5-cytosoine methyltransferase [Escherichia coli 536] Length = 315 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 4/82 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+K+ LF G GG+ L + + ++++I+ +V TY+ N + ++ D+++I Sbjct: 1 MMKVVSLFSGAGGLDLGFKNA----GFQIVWANDIDSDAVLTYKKNIGDHIVLKDLSQID 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 DIPD DV++ GFPCQ FSQA Sbjct: 57 MDDIPDCDVVIGGFPCQGFSQA 78 >gi|261400634|ref|ZP_05986759.1| DNA (cytosine-5-)-methyltransferase [Neisseria lactamica ATCC 23970] gi|313668389|ref|YP_004048673.1| DNA modification methylase [Neisseria lactamica ST-640] gi|1709164|sp|P50182|MTN4_NEILA RecName: Full=Modification methylase NlaIV; Short=M.NlaIV; AltName: Full=Cytosine-specific methyltransferase NlaIV gi|476227|gb|AAA53237.1| M.NlaIV [Neisseria lactamica] gi|269209540|gb|EEZ75995.1| DNA (cytosine-5-)-methyltransferase [Neisseria lactamica ATCC 23970] gi|313005851|emb|CBN87307.1| DNA modification methylase [Neisseria lactamica 020-06] Length = 423 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 42/84 (50%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF G+ GIR EQ ++V +C F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACKCVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T DIPD D+LLAGFPCQ FS AG Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87 >gi|282899236|ref|ZP_06307209.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii CS-505] gi|281195872|gb|EFA70796.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii CS-505] Length = 422 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 M++ DLF GIGG+RL +Q + EC SSEI+ +V+TY+ NF + GDI + Sbjct: 1 MIRFIDLFAGIGGMRLGFQQACDVLGVEYECVLSSEIDKKAVETYKINFDDQPR-GDIRE 59 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I +P+ D +LAGFPCQPFS AG Sbjct: 60 IDI--MPEFDFMLAGFPCQPFSYAG 82 >gi|296282358|ref|ZP_06860356.1| DNA-cytosine methyltransferase [Citromicrobium bathyomarinum JL354] Length = 439 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKI- 59 + DLF GIGG+R+ + H C F+SE + ++ +TY+ NF N + GD+ + Sbjct: 90 FRFIDLFAGIGGLRIGFQGIGGH----CVFTSEWDRFAQETYRVNFRDNHKLHGDVREFA 145 Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83 + IP+HDVLL GFPCQPFS AG Sbjct: 146 ENPELIPEHDVLLGGFPCQPFSLAG 170 >gi|228469904|ref|ZP_04054843.1| cytosine-specific methyltransferase NlaX [Porphyromonas uenonis 60-3] gi|228308539|gb|EEK17327.1| cytosine-specific methyltransferase NlaX [Porphyromonas uenonis 60-3] Length = 395 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 39/90 (43%), Positives = 49/90 (54%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--------FPNTLIF 53 L DLF GIGG L + + +C F+SE + Y+ +TY+AN F L Sbjct: 34 LTFIDLFAGIGGFHLAM----HSVGAQCVFASEWDQYARQTYEANYRKLAPELFSRGLFA 89 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GDI K+ IP D+L AGFPCQPFS AG Sbjct: 90 GDITKVDPASIPPFDILCAGFPCQPFSVAG 119 >gi|212716092|ref|ZP_03324220.1| hypothetical protein BIFCAT_01005 [Bifidobacterium catenulatum DSM 16992] gi|212661459|gb|EEB22034.1| hypothetical protein BIFCAT_01005 [Bifidobacterium catenulatum DSM 16992] Length = 453 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 41/83 (49%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 + DLF GIGGIR H FSSE N +S +TY+ N+ + GDI K+ Sbjct: 84 FRTIDLFAGIGGIRRGFASAGGHA----VFSSEWNEFSARTYRTNYGFTEQMAGDITKVD 139 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD DV+LAGFPCQPFS AG Sbjct: 140 VDDIPDCDVVLAGFPCQPFSVAG 162 >gi|312281368|ref|YP_004022731.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181897|gb|ADQ42066.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 319 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +++ LF G+GGI L +Q + ++++I+ Y+ TY++NFP L+ GDI I Sbjct: 4 IRVVSLFSGVGGICLAFKQA----GFDVIWANDIDKYACITYRSNFPTVELVEGDIQSID 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + +IP+ D++ AGFPCQPFS AG Sbjct: 60 SNNIPECDIITAGFPCQPFSIAG 82 >gi|320331203|gb|EFW87160.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea str. race 4] gi|330882725|gb|EGH16874.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 420 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 + DLF GIGGIR+ E EC F+SE N +S KTY N+ + F GDI Sbjct: 69 FRFVDLFAGIGGIRMGFEA----HGGECVFTSEWNDFSKKTYIENYGDRHQFVGDIVPFP 124 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +D+P+HDVLL GFPCQPFS AG Sbjct: 125 AEDVPNHDVLLGGFPCQPFSIAG 147 >gi|172039424|ref|YP_001805925.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] gi|171700878|gb|ACB53859.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] Length = 729 Score = 130 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 40/82 (48%), Positives = 47/82 (57%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF GIGG RL E+ C +S EIN + + Y NF L DI KI Sbjct: 6 LKFIDLFAGIGGFRLAFEKA----GYHCVYSCEINDHCRQVYYDNFG-ELPDQDITKIIP 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++IPD D+L AGFPCQPFS G Sbjct: 61 KNIPDFDILTAGFPCQPFSICG 82 >gi|209520785|ref|ZP_03269531.1| DNA-cytosine methyltransferase [Burkholderia sp. H160] gi|209498782|gb|EDZ98891.1| DNA-cytosine methyltransferase [Burkholderia sp. H160] Length = 432 Score = 130 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 40/91 (43%), Positives = 50/91 (54%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---------TLI 52 + DLF GIGGIR+ E EC F+SE N +S +TY+ N+ + Sbjct: 71 FRFIDLFAGIGGIRMGFE----THGGECVFTSEWNEFSTRTYRENYGENAGSGTDSAHAL 126 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GDI +D+P HDVLL GFPCQPFS AG Sbjct: 127 IGDIVAFPAEDVPSHDVLLGGFPCQPFSIAG 157 >gi|319644454|ref|ZP_07998887.1| hypothetical protein HMPREF9011_04490 [Bacteroides sp. 3_1_40A] gi|317384095|gb|EFV65072.1| hypothetical protein HMPREF9011_04490 [Bacteroides sp. 3_1_40A] Length = 139 Score = 130 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 2/84 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF GIGGIR LE + EC F+SEI +++K + N PN LI GDI ++ Sbjct: 5 IKFIDLFAGIGGIRCGLELAAHEAGYKTECVFTSEIKKHAIKVLKQNHPNELINGDITQV 64 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 ++IPD D+ AGFPCQ FS G Sbjct: 65 NEKEIPDFDICCAGFPCQSFSGGG 88 >gi|238917714|ref|YP_002931231.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC 27750] gi|238873074|gb|ACR72784.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC 27750] Length = 311 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ F G+GG+ + ++++ + Y+V+TY+ANF ++ GDI +I Sbjct: 1 MKVVSFFSGLGGLDKGF----VDTGYDIIWANDFDKYAVQTYKANFGEHIVLGDINEIPL 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++IPD D+L+ GFPCQPFS G Sbjct: 57 EEIPDCDILIGGFPCQPFSMMG 78 >gi|46581246|ref|YP_012054.1| type II DNA modification methyltransferase [Desulfovibrio vulgaris str. Hildenborough] gi|46450667|gb|AAS97314.1| type II DNA modification methyltransferase, putative [Desulfovibrio vulgaris str. Hildenborough] gi|311234912|gb|ADP87766.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1] Length = 358 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 41/91 (45%), Positives = 48/91 (52%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 DLF GIGGIRL E C S+E + Y+ KTY+A F + F Sbjct: 7 FSFIDLFAGIGGIRLGFEAA----GGRCVMSAEYDKYAQKTYRAFFGESPDFSEIMSVSP 62 Query: 54 -GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GDI K+ +PDHDVL GFPCQPFS AG Sbjct: 63 PGDITKLPPHLVPDHDVLTGGFPCQPFSLAG 93 >gi|119510471|ref|ZP_01629604.1| DNA cytosine methylase [Nodularia spumigena CCY9414] gi|119464893|gb|EAW45797.1| DNA cytosine methylase [Nodularia spumigena CCY9414] Length = 727 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 46/82 (56%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF GIGG RL E+ + EC FS EI+ + Y NF + DI KI Sbjct: 6 LKFGDLFAGIGGFRLAFEKA----DYECVFSCEIDQACQQVYLNNFGDKPEC-DIRKIDL 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + +P DVL AGFPCQPFS G Sbjct: 61 EKLPYFDVLTAGFPCQPFSICG 82 >gi|300724477|ref|YP_003713798.1| DNA cytosine methylase [Xenorhabdus nematophila ATCC 19061] gi|297631015|emb|CBJ91699.1| DNA cytosine methylase [Xenorhabdus nematophila ATCC 19061] Length = 476 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E+ +C F+SE N +V+TY+AN+ P +F DI Sbjct: 96 FRFIDLFAGIGGIRKGFEE----IGGQCVFTSEWNKDAVRTYKANWYCDPEEHVFNSDIR 151 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I ++IP+HDVLLAGFPCQPFS AG Sbjct: 152 DITLSHDISVSDKEAYQNIDREIPNHDVLLAGFPCQPFSLAG 193 >gi|295675907|ref|YP_003604431.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1002] gi|295435750|gb|ADG14920.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1002] Length = 430 Score = 129 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 40/89 (44%), Positives = 50/89 (56%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFG 54 + DLF GIGGIR+ E EC F+SE N +S +TY+ N+ + G Sbjct: 71 FRFIDLFAGIGGIRMGFEA----HGGECVFTSEWNDFSTRTYRENYGGNAASGSAHALIG 126 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI +D+P HDVLL GFPCQPFS AG Sbjct: 127 DIVAFPAEDVPSHDVLLGGFPCQPFSIAG 155 >gi|157737722|ref|YP_001490405.1| DNA (cytosine-5-)-methyltransferase [Arcobacter butzleri RM4018] gi|157699576|gb|ABV67736.1| DNA (Cytosine-5-)-methyltransferase [Arcobacter butzleri RM4018] Length = 326 Score = 129 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 42/82 (51%), Positives = 54/82 (65%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIR E+ F + E F+SE++ Y+ Y N+ N +GDI KIK Sbjct: 20 YKFIDLFAGIGGIRTGFEKVFKEES-EFVFASELDKYAQIAYFENY-NEKPYGDITKIKE 77 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIP+HD++LAGFPCQ FS AG Sbjct: 78 EDIPNHDIILAGFPCQAFSIAG 99 >gi|157827820|ref|YP_001496884.1| site-specific DNA methylase [Rickettsia bellii OSU 85-389] gi|157803124|gb|ABV79847.1| Site-specific DNA methylase [Rickettsia bellii OSU 85-389] Length = 165 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLFCGIGG R LE +N+EC FSS+I+ + Y+ NF + GDI +I Sbjct: 1 MYKFIDLFCGIGGFRKALES----KNLECVFSSDIDKDVQEAYKRNFGDKP-HGDITEIP 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IP HD+L AGFPCQ FS +G Sbjct: 56 ANKIPKHDILCAGFPCQSFSISG 78 >gi|298373723|ref|ZP_06983712.1| modification methylase EcoRII [Bacteroidetes oral taxon 274 str. F0058] gi|298274775|gb|EFI16327.1| modification methylase EcoRII [Bacteroidetes oral taxon 274 str. F0058] Length = 457 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 45/83 (54%), Positives = 53/83 (63%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 LK DLF G+GG L L +C F+SEI K Y+ NFP T I GDI KIK Sbjct: 12 LKFIDLFAGLGGFHLAL----KELGCKCVFASEIKDDLRKLYKINFPETPIIEGDITKIK 67 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +++IP HD+L AGFPCQPFSQAG Sbjct: 68 SEEIPSHDILCAGFPCQPFSQAG 90 >gi|91206207|ref|YP_538562.1| site-specific DNA methylase [Rickettsia bellii RML369-C] gi|91069751|gb|ABE05473.1| Site-specific DNA methylase [Rickettsia bellii RML369-C] Length = 308 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLFCGIGG R LE +N+EC FSS+I+ + Y+ NF + GDI ++ Sbjct: 1 MYKFIDLFCGIGGFRKALES----KNLECVFSSDIDKDVQEAYKRNFGDKP-HGDITEMP 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IP HD+L AGFPCQ FS +G Sbjct: 56 ANKIPKHDILCAGFPCQSFSISG 78 >gi|313158099|gb|EFR57504.1| putative DNA (cytosine-5-)-methyltransferase [Alistipes sp. HGB5] Length = 431 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 42/84 (50%), Positives = 51/84 (60%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF G+GG RL ++ H C FSSE N Y+ +TY ANF FGDI K + Sbjct: 110 FTFIDLFAGMGGFRLAMQ----HYGGRCVFSSEWNKYAQQTYLANFGEVP-FGDITKDEI 164 Query: 62 QD-IPD-HDVLLAGFPCQPFSQAG 83 ++ IPD D+L AGFPCQPFS AG Sbjct: 165 KEYIPDGFDILCAGFPCQPFSIAG 188 >gi|37524351|ref|NP_927695.1| DNA cytosine methylase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36783775|emb|CAE12633.1| DNA-cytosine methyltransferase [Photorhabdus luminescens subsp. laumondii TTO1] Length = 478 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E+ +C F+SE N +V+TY+AN+ P + F DI Sbjct: 96 FRFIDLFAGIGGIRKGFEE----IGGQCVFTSEWNKDAVRTYKANWYCDPESHKFNSDIR 151 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 +I ++IPDHDVLLAGFPCQPFS AG Sbjct: 152 EITLSENSKIDEKEAYKNIDKEIPDHDVLLAGFPCQPFSLAG 193 >gi|127464|sp|P11408|MTM1_MORSP RecName: Full=Modification methylase MspI; Short=M.MspI; AltName: Full=Cytosine-specific methyltransferase MspI gi|44539|emb|CAA32393.1| unnamed protein product [Moraxella sp.] Length = 418 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 43/82 (52%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIR Q+F +C FSSEI+P++ TY NF + FGDI K++ Sbjct: 105 FKFIDLFSGIGGIR----QSFEVNGGKCVFSSEIDPFAKFTYYTNFG-VVPFGDITKVEA 159 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP HD+L AGFPCQPFS G Sbjct: 160 TTIPQHDILCAGFPCQPFSHIG 181 >gi|238787820|ref|ZP_04631617.1| Modification methylase EcoRII [Yersinia frederiksenii ATCC 33641] gi|238724163|gb|EEQ15806.1| Modification methylase EcoRII [Yersinia frederiksenii ATCC 33641] Length = 475 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57 + DLF GIGGIR E +C F+SE NPY+V+TY+AN+ DI Sbjct: 96 FRFIDLFAGIGGIRKGFEA----IGGQCVFTSEWNPYAVRTYKANWYCDPVEHRFNSDIR 151 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 +I + IPDHDVLLAGFPCQPFS AG Sbjct: 152 EITLSENTEISDEEAYRNIDEHIPDHDVLLAGFPCQPFSLAG 193 >gi|296114735|ref|ZP_06833385.1| DNA-cytosine methyltransferase [Gluconacetobacter hansenii ATCC 23769] gi|295978659|gb|EFG85387.1| DNA-cytosine methyltransferase [Gluconacetobacter hansenii ATCC 23769] Length = 419 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKI- 59 + DLF GIGG+R+ E+ C F+SE + +S +TY N+P N I GDI Sbjct: 70 FRFIDLFAGIGGLRIGFEE----IGGRCVFTSEWDRFSRQTYALNYPDNHEISGDIRPFA 125 Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83 IP+HDVLLAGFPCQPFS AG Sbjct: 126 EDPSLIPEHDVLLAGFPCQPFSIAG 150 >gi|170691874|ref|ZP_02883038.1| DNA-cytosine methyltransferase [Burkholderia graminis C4D1M] gi|170143158|gb|EDT11322.1| DNA-cytosine methyltransferase [Burkholderia graminis C4D1M] Length = 438 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 42/86 (48%), Positives = 48/86 (55%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 + DLF GIGGIR E +C F+SE N +S KTYQ N + GDI Sbjct: 83 FRFIDLFAGIGGIRRGFEA----HGGQCVFTSEWNEFSKKTYQQNHRDADDAHQFVGDIV 138 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 +IP HDVLLAGFPCQPFS AG Sbjct: 139 SFAEDEIPPHDVLLAGFPCQPFSIAG 164 >gi|326559503|gb|EGE09926.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 7169] Length = 354 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 LK+ LF G GG+ L FN E F+++I + +TYQ NF + +I Sbjct: 22 LKVISLFSGCGGMDLGFIGNFNSLGNFYPKQPFEIIFANDIFEKACQTYQHNFNHNIICQ 81 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI+ I DIP D+++ GFPCQ FS AG Sbjct: 82 DISTIDDGDIPKADIVIGGFPCQDFSLAG 110 >gi|119026301|ref|YP_910146.1| DNA-methyltransferase MKpn2kI [Bifidobacterium adolescentis ATCC 15703] gi|118765885|dbj|BAF40064.1| DNA-methyltransferase MKpn2kI [Bifidobacterium adolescentis ATCC 15703] Length = 383 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 45/82 (54%), Positives = 53/82 (64%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF GIGG RL ++T V+ FSSEIN +S KTY ANF GDI +I Sbjct: 73 YRSIDLFAGIGGTRLGFQETGR---VKVVFSSEINKFSAKTYHANFG-EYPAGDITQIAA 128 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+L+ GFPCQ FSQAG Sbjct: 129 SDIPDHDILVGGFPCQAFSQAG 150 >gi|269122857|ref|YP_003305434.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] gi|268314183|gb|ACZ00557.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] Length = 329 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 40/82 (48%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF G+GG RL LE EC +S+E + + K YQ NF + GDI I Sbjct: 12 LKFIDLFAGLGGFRLSLES----FGAECVYSNEWDKNAQKVYQMNFGDMP-EGDITLIDE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +IPDHD+L AGFPCQ FS +G Sbjct: 67 NNIPDHDILCAGFPCQAFSISG 88 >gi|1871451|dbj|BAA11167.1| C5-cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi] gi|3421011|emb|CAA76526.1| M.Ecl18kI (DNA-methyltransferase) [Enterobacter cloacae] Length = 379 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL QT V FSSE + ++ KTY AN+ + GDI KI Sbjct: 72 YRMIDLFAGIGGTRLGFHQT---NAVNVVFSSEWDKFAQKTYHANYGD-FPDGDITKIDE 127 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIPDH++L+ GFPC FSQAG Sbjct: 128 KDIPDHEILVGGFPCVAFSQAG 149 >gi|326567273|gb|EGE17393.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 12P80B1] gi|326568220|gb|EGE18302.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC8] Length = 354 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 LK+ LF G GG+ L FN E F+++I + +TYQ NF + +I Sbjct: 22 LKVISLFSGCGGMDLGFIGNFNSLGNFYPKQPFEIIFANDIFEKACQTYQHNFNHNIICQ 81 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI+ I DIP D+++ GFPCQ FS AG Sbjct: 82 DISTIDDGDIPKADIVIGGFPCQDFSLAG 110 >gi|32470131|ref|NP_863573.1| DNA-methyltransferase MKpn2kI [Klebsiella pneumoniae] gi|462656|sp|P34879|MTS2_SHISO RecName: Full=Modification methylase SsoII; Short=M.SsoII; AltName: Full=Cytosine-specific methyltransferase SsoII gi|11559818|gb|AAG38101.1|AF300473_2 DNA-methyltransferase MKpn2kI [Klebsiella pneumoniae] gi|294244|gb|AAA98279.1| C5-cytosine methylase [Plasmid P4] Length = 379 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL QT V FSSE + ++ KTY AN+ + GDI KI Sbjct: 72 YRMIDLFAGIGGTRLGFHQT---NAVNVVFSSEWDKFAQKTYHANYGD-FPDGDITKIDE 127 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIPDH++L+ GFPC FSQAG Sbjct: 128 KDIPDHEILVGGFPCVAFSQAG 149 >gi|326566077|gb|EGE16234.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC1] Length = 354 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 LK+ LF G GG+ L FN E F+++I + +TYQ NF + +I Sbjct: 22 LKVISLFSGCGGMDLGFIGDFNSLGNFYPKQPFEIIFANDIFEKACQTYQHNFNHNIICQ 81 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI+ I DIP D+++ GFPCQ FS AG Sbjct: 82 DISTIDDTDIPKADIVIGGFPCQDFSLAG 110 >gi|1657420|gb|AAC45971.1| DNA cytosine methyltransferase M.SenPI [Salmonella enterica subsp. enterica serovar Enteritidis] Length = 379 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL QT V FSSE + ++ KTY AN+ + GDI KI Sbjct: 72 YRMIDLFAGIGGTRLGFHQT---NAVNVVFSSEWDKFAQKTYHANYGD-FPDGDITKIDE 127 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIPDH++L+ GFPC FSQAG Sbjct: 128 KDIPDHEILVGGFPCVAFSQAG 149 >gi|225571452|ref|ZP_03780448.1| hypothetical protein CLOHYLEM_07550 [Clostridium hylemonae DSM 15053] gi|225159928|gb|EEG72547.1| hypothetical protein CLOHYLEM_07550 [Clostridium hylemonae DSM 15053] Length = 377 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 3/84 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ++ DLFCGIGG R + F+ ++E C FSS+I+ Y+ +Y+ANF GDI KI Sbjct: 74 IRYIDLFCGIGGFRYASQYAFDKLDLEGKCVFSSDIDKYAQVSYEANFGERP-MGDITKI 132 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +IPD D+L GFPCQ FS G Sbjct: 133 EASEIPDFDILFGGFPCQAFSICG 156 >gi|195867949|ref|ZP_03079946.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195660345|gb|EDX53605.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] Length = 319 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF GIGGI +Q + +++EI+ + KTY+ NF ++ L+ GDI I Sbjct: 4 IKVASLFAGIGGICYGFKQA----GAKIVWANEIDRDACKTYRYNFGDSYLVEGDIKNIG 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD D+L GFPCQ FS AG Sbjct: 60 PNDIPDIDILNGGFPCQAFSIAG 82 >gi|150026305|ref|YP_001297131.1| Type II modification methyltransferase HpaII [Flavobacterium psychrophilum JIP02/86] gi|149772846|emb|CAL44330.1| Type II modification methyltransferase HpaII [Flavobacterium psychrophilum JIP02/86] Length = 425 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG R+ ++ + +C F+SE + + KTY+AN+ FGDI K + Sbjct: 95 FKFVDLFAGIGGFRMAMQ----NLGGKCVFTSEWDKEAQKTYRANYGEVP-FGDITKQQI 149 Query: 62 QD-IP-DHDVLLAGFPCQPFSQAG 83 +D IP + D+L AGFPCQ FS AG Sbjct: 150 KDYIPSEFDLLCAGFPCQAFSIAG 173 >gi|159795737|pdb|2Z6A|A Chain A, S-Adenosyl-L-Methionine-Dependent Methyl Transfer: Observable Precatalytic Intermediates During Dna Cytosine Methylation Length = 327 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF GDI ++ Sbjct: 12 LRFIDLFAGLGGFRLALESC----GAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AGFP Q FS +G Sbjct: 67 KTIPDHDILCAGFPAQAFSISG 88 >gi|209554428|ref|YP_002284952.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|209541929|gb|ACI60158.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] Length = 319 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF GIGGI +Q + +++EI+ + KTY+ NF ++ L+ GDI I Sbjct: 4 IKVASLFAGIGGICYGFKQA----GAKIVWANEIDRDACKTYRYNFGDSYLVEGDIKNIG 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD D+L GFPCQ FS AG Sbjct: 60 PNDIPDIDILNGGFPCQAFSIAG 82 >gi|330911766|gb|EGH40276.1| DNA-cytosine methyltransferase [Escherichia coli AA86] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|323962004|gb|EGB57603.1| DNA-cytosine methyltransferase [Escherichia coli H489] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|320641809|gb|EFX11197.1| DNA cytosine methylase [Escherichia coli O157:H7 str. G5101] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAVEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|315296465|gb|EFU55762.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 16-3] Length = 476 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 91 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 188 >gi|315290247|gb|EFU49625.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 153-1] Length = 478 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 93 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 148 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 149 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 190 >gi|315286667|gb|EFU46100.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 110-3] Length = 475 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 90 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 145 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 146 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 187 >gi|331673470|ref|ZP_08374238.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA280] gi|331069668|gb|EGI41055.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA280] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|331663456|ref|ZP_08364366.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA143] gi|331059255|gb|EGI31232.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA143] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|331653374|ref|ZP_08354379.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M718] gi|331049472|gb|EGI21544.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M718] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|300940416|ref|ZP_07155001.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 21-1] gi|300454810|gb|EFK18303.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 21-1] Length = 476 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 91 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 188 >gi|300923873|ref|ZP_07139889.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 182-1] gi|300419870|gb|EFK03181.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 182-1] Length = 477 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 92 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 148 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189 >gi|300975476|ref|ZP_07173024.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 45-1] gi|300410366|gb|EFJ93904.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 45-1] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|300904853|ref|ZP_07122678.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1] gi|301304244|ref|ZP_07210359.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1] gi|300403236|gb|EFJ86774.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1] gi|300840501|gb|EFK68261.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1] gi|315257206|gb|EFU37174.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|301018179|ref|ZP_07182696.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1] gi|300399832|gb|EFJ83370.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|301050676|ref|ZP_07197538.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 185-1] gi|300297633|gb|EFJ54018.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 185-1] Length = 477 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 92 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 148 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189 >gi|293410317|ref|ZP_06653893.1| conserved hypothetical protein [Escherichia coli B354] gi|291470785|gb|EFF13269.1| conserved hypothetical protein [Escherichia coli B354] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKDGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|260855934|ref|YP_003229825.1| DNA cytosine methylase [Escherichia coli O26:H11 str. 11368] gi|300822269|ref|ZP_07102410.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 119-7] gi|257754583|dbj|BAI26085.1| DNA cytosine methylase [Escherichia coli O26:H11 str. 11368] gi|300525152|gb|EFK46221.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 119-7] gi|309702249|emb|CBJ01566.1| DNA-cytosine methyltransferase [Escherichia coli ETEC H10407] gi|323937230|gb|EGB33510.1| DNA-cytosine methyltransferase [Escherichia coli E1520] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|218554541|ref|YP_002387454.1| DNA cytosine methylase [Escherichia coli IAI1] gi|260868553|ref|YP_003234955.1| DNA cytosine methylase [Escherichia coli O111:H- str. 11128] gi|218361309|emb|CAQ98893.1| DNA cytosine methylase [Escherichia coli IAI1] gi|257764909|dbj|BAI36404.1| DNA cytosine methylase [Escherichia coli O111:H- str. 11128] gi|323180787|gb|EFZ66327.1| DNA-cytosine methyltransferase [Escherichia coli 1180] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|170681403|ref|YP_001743285.1| DNA cytosine methylase [Escherichia coli SMS-3-5] gi|170519121|gb|ACB17299.1| DNA-cytosine methyltransferase [Escherichia coli SMS-3-5] gi|324119009|gb|EGC12898.1| DNA-cytosine methyltransferase [Escherichia coli E1167] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|91211180|ref|YP_541166.1| DNA cytosine methylase [Escherichia coli UTI89] gi|117624099|ref|YP_853012.1| DNA cytosine methylase [Escherichia coli APEC O1] gi|218558817|ref|YP_002391730.1| DNA cytosine methylase [Escherichia coli S88] gi|91072754|gb|ABE07635.1| DNA cytosine methylase [Escherichia coli UTI89] gi|115513223|gb|ABJ01298.1| DNA cytosine methylase [Escherichia coli APEC O1] gi|218365586|emb|CAR03313.1| DNA cytosine methylase [Escherichia coli S88] gi|294492656|gb|ADE91412.1| DNA-cytosine methyltransferase [Escherichia coli IHE3034] gi|307626564|gb|ADN70868.1| DNA cytosine methylase [Escherichia coli UM146] gi|323952452|gb|EGB48325.1| DNA-cytosine methyltransferase [Escherichia coli H252] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|82543581|ref|YP_407528.1| DNA cytosine methylase [Shigella boydii Sb227] gi|81244992|gb|ABB65700.1| DNA cytosine methylase [Shigella boydii Sb227] gi|332096894|gb|EGJ01883.1| DNA-cytosine methyltransferase [Shigella boydii 3594-74] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|74312499|ref|YP_310918.1| DNA cytosine methylase [Shigella sonnei Ss046] gi|73855976|gb|AAZ88683.1| DNA cytosine methylase [Shigella sonnei Ss046] gi|323168918|gb|EFZ54598.1| DNA-cytosine methyltransferase [Shigella sonnei 53G] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|26248232|ref|NP_754272.1| DNA cytosine methylase [Escherichia coli CFT073] gi|227885611|ref|ZP_04003416.1| DNA cytosine methylase [Escherichia coli 83972] gi|237705920|ref|ZP_04536401.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA] gi|331647554|ref|ZP_08348646.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M605] gi|26108636|gb|AAN80839.1|AE016762_92 DNA-cytosine methyltransferase [Escherichia coli CFT073] gi|226900677|gb|EEH86936.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA] gi|227837184|gb|EEJ47650.1| DNA cytosine methylase [Escherichia coli 83972] gi|281179022|dbj|BAI55352.1| DNA cytosine methylase [Escherichia coli SE15] gi|307553973|gb|ADN46748.1| DNA cytosine methylase [Escherichia coli ABU 83972] gi|320194327|gb|EFW68958.1| DNA-cytosine methyltransferase [Escherichia coli WV_060327] gi|323956356|gb|EGB52099.1| DNA-cytosine methyltransferase [Escherichia coli H263] gi|324005878|gb|EGB75097.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 57-2] gi|331043278|gb|EGI15416.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M605] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|15802395|ref|NP_288421.1| DNA cytosine methylase [Escherichia coli O157:H7 EDL933] gi|15831953|ref|NP_310726.1| DNA cytosine methylase [Escherichia coli O157:H7 str. Sakai] gi|16129907|ref|NP_416470.1| DNA cytosine methyltransferase [Escherichia coli str. K-12 substr. MG1655] gi|89108792|ref|AP_002572.1| DNA cytosine methylase [Escherichia coli str. K-12 substr. W3110] gi|168752207|ref|ZP_02777229.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4113] gi|168758275|ref|ZP_02783282.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4401] gi|168771615|ref|ZP_02796622.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4486] gi|168777717|ref|ZP_02802724.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4196] gi|168783359|ref|ZP_02808366.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4076] gi|168789321|ref|ZP_02814328.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC869] gi|168801737|ref|ZP_02826744.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC508] gi|170081604|ref|YP_001730924.1| DNA cytosine methylase [Escherichia coli str. K-12 substr. DH10B] gi|195939267|ref|ZP_03084649.1| DNA cytosine methylase [Escherichia coli O157:H7 str. EC4024] gi|208810340|ref|ZP_03252216.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4206] gi|208816602|ref|ZP_03257722.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4045] gi|208821263|ref|ZP_03261583.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4042] gi|209400193|ref|YP_002271076.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4115] gi|209919382|ref|YP_002293466.1| DNA cytosine methylase [Escherichia coli SE11] gi|217328629|ref|ZP_03444710.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. TW14588] gi|218689956|ref|YP_002398168.1| DNA cytosine methylase [Escherichia coli ED1a] gi|238901165|ref|YP_002926961.1| DNA cytosine methylase [Escherichia coli BW2952] gi|253773091|ref|YP_003035922.1| DNA cytosine methylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254793611|ref|YP_003078448.1| DNA cytosine methylase [Escherichia coli O157:H7 str. TW14359] gi|256017846|ref|ZP_05431711.1| DNA cytosine methylase [Shigella sp. D9] gi|261227545|ref|ZP_05941826.1| DNA cytosine methylase [Escherichia coli O157:H7 str. FRIK2000] gi|261254631|ref|ZP_05947164.1| DNA cytosine methylase [Escherichia coli O157:H7 str. FRIK966] gi|293415271|ref|ZP_06657914.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185] gi|300818618|ref|ZP_07098826.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 107-1] gi|300920181|ref|ZP_07136630.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 115-1] gi|301327749|ref|ZP_07220953.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1] gi|301644580|ref|ZP_07244570.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 146-1] gi|307312454|ref|ZP_07592088.1| DNA-cytosine methyltransferase [Escherichia coli W] gi|312973821|ref|ZP_07787993.1| DNA-cytosine methyltransferase [Escherichia coli 1827-70] gi|332278872|ref|ZP_08391285.1| DNA cytosine methylase [Shigella sp. D9] gi|83305674|sp|P0AEE0|DCM_ECO57 RecName: Full=DNA-cytosine methyltransferase gi|83305675|sp|P0AED9|DCM_ECOLI RecName: Full=DNA-cytosine methyltransferase; AltName: Full=M.EcoDcm gi|12516070|gb|AAG56975.1|AE005418_3 DNA cytosine methylase [Escherichia coli O157:H7 str. EDL933] gi|41239|emb|CAA31705.1| unnamed protein product [Escherichia coli K-12] gi|145719|gb|AAA03723.1| DNA cytosine methylase [Escherichia coli] gi|1736630|dbj|BAA15788.1| DNA cytosine methylase [Escherichia coli str. K12 substr. W3110] gi|1788271|gb|AAC75027.1| DNA cytosine methyltransferase [Escherichia coli str. K-12 substr. MG1655] gi|13362167|dbj|BAB36122.1| DNA cytosine methylase [Escherichia coli O157:H7 str. Sakai] gi|169889439|gb|ACB03146.1| DNA cytosine methylase [Escherichia coli str. K-12 substr. DH10B] gi|187767102|gb|EDU30946.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4196] gi|188013903|gb|EDU52025.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4113] gi|188999305|gb|EDU68291.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4076] gi|189354901|gb|EDU73320.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4401] gi|189359668|gb|EDU78087.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4486] gi|189371047|gb|EDU89463.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC869] gi|189376137|gb|EDU94553.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC508] gi|208724856|gb|EDZ74563.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4206] gi|208730945|gb|EDZ79634.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4045] gi|208741386|gb|EDZ89068.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4042] gi|209161593|gb|ACI39026.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC4115] gi|209766668|gb|ACI81646.1| DNA cytosine methylase [Escherichia coli] gi|209766670|gb|ACI81647.1| DNA cytosine methylase [Escherichia coli] gi|209766672|gb|ACI81648.1| DNA cytosine methylase [Escherichia coli] gi|209766676|gb|ACI81650.1| DNA cytosine methylase [Escherichia coli] gi|209912641|dbj|BAG77715.1| DNA cytosine methylase [Escherichia coli SE11] gi|217317976|gb|EEC26403.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. TW14588] gi|218427520|emb|CAR08415.2| DNA cytosine methylase [Escherichia coli ED1a] gi|238860813|gb|ACR62811.1| DNA cytosine methylase [Escherichia coli BW2952] gi|253324135|gb|ACT28737.1| DNA-cytosine methyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254593011|gb|ACT72372.1| DNA cytosine methylase [Escherichia coli O157:H7 str. TW14359] gi|260448927|gb|ACX39349.1| DNA-cytosine methyltransferase [Escherichia coli DH1] gi|291432919|gb|EFF05898.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185] gi|300412803|gb|EFJ96113.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 115-1] gi|300528790|gb|EFK49852.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 107-1] gi|300845711|gb|EFK73471.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1] gi|301077088|gb|EFK91894.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 146-1] gi|306907625|gb|EFN38128.1| DNA-cytosine methyltransferase [Escherichia coli W] gi|310332416|gb|EFP99651.1| DNA-cytosine methyltransferase [Escherichia coli 1827-70] gi|315061260|gb|ADT75587.1| DNA cytosine methylase [Escherichia coli W] gi|315136597|dbj|BAJ43756.1| DNA cytosine methylase [Escherichia coli DH1] gi|320191934|gb|EFW66581.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. EC1212] gi|320198651|gb|EFW73251.1| DNA-cytosine methyltransferase [Escherichia coli EC4100B] gi|320647167|gb|EFX16000.1| DNA cytosine methylase [Escherichia coli O157:H- str. 493-89] gi|320652452|gb|EFX20750.1| DNA cytosine methylase [Escherichia coli O157:H- str. H 2687] gi|320658054|gb|EFX25816.1| DNA cytosine methylase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658625|gb|EFX26319.1| DNA cytosine methylase [Escherichia coli O55:H7 str. USDA 5905] gi|320668523|gb|EFX35350.1| DNA cytosine methylase [Escherichia coli O157:H7 str. LSU-61] gi|323174657|gb|EFZ60277.1| DNA-cytosine methyltransferase [Escherichia coli LT-68] gi|323183944|gb|EFZ69331.1| DNA-cytosine methyltransferase [Escherichia coli 1357] gi|323378163|gb|ADX50431.1| DNA-cytosine methyltransferase [Escherichia coli KO11] gi|323948336|gb|EGB44323.1| DNA-cytosine methyltransferase [Escherichia coli H120] gi|326342371|gb|EGD66152.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. 1044] gi|326344875|gb|EGD68622.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. 1125] gi|332101224|gb|EGJ04570.1| DNA cytosine methylase [Shigella sp. D9] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|193066646|ref|ZP_03047681.1| DNA-cytosine methyltransferase [Escherichia coli E22] gi|260844359|ref|YP_003222137.1| DNA cytosine methylase [Escherichia coli O103:H2 str. 12009] gi|192925721|gb|EDV80380.1| DNA-cytosine methyltransferase [Escherichia coli E22] gi|257759506|dbj|BAI31003.1| DNA cytosine methylase [Escherichia coli O103:H2 str. 12009] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|191169235|ref|ZP_03030988.1| DNA-cytosine methyltransferase [Escherichia coli B7A] gi|190900713|gb|EDV60509.1| DNA-cytosine methyltransferase [Escherichia coli B7A] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|110642066|ref|YP_669796.1| DNA cytosine methylase [Escherichia coli 536] gi|191173268|ref|ZP_03034798.1| DNA-cytosine methyltransferase [Escherichia coli F11] gi|110343658|gb|ABG69895.1| DNA-cytosine methyltransferase [Escherichia coli 536] gi|190906385|gb|EDV65994.1| DNA-cytosine methyltransferase [Escherichia coli F11] gi|222033699|emb|CAP76440.1| DNA-cytosine methyltransferase [Escherichia coli LF82] gi|312946553|gb|ADR27380.1| DNA cytosine methylase [Escherichia coli O83:H1 str. NRG 857C] gi|324013473|gb|EGB82692.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 60-1] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|157161430|ref|YP_001458748.1| DNA cytosine methylase [Escherichia coli HS] gi|157067110|gb|ABV06365.1| DNA-cytosine methyltransferase [Escherichia coli HS] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|157158517|ref|YP_001463262.1| DNA cytosine methylase [Escherichia coli E24377A] gi|157080547|gb|ABV20255.1| DNA-cytosine methyltransferase [Escherichia coli E24377A] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|187732725|ref|YP_001879611.1| DNA cytosine methylase [Shigella boydii CDC 3083-94] gi|293446340|ref|ZP_06662762.1| DNA-cytosine methyltransferase [Escherichia coli B088] gi|187429717|gb|ACD08991.1| DNA-cytosine methyltransferase [Shigella boydii CDC 3083-94] gi|291323170|gb|EFE62598.1| DNA-cytosine methyltransferase [Escherichia coli B088] gi|320175451|gb|EFW50550.1| DNA-cytosine methyltransferase [Shigella dysenteriae CDC 74-1112] gi|320184499|gb|EFW59303.1| DNA-cytosine methyltransferase [Shigella flexneri CDC 796-83] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|323186716|gb|EFZ72038.1| DNA-cytosine methyltransferase [Escherichia coli RN587/1] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|331658007|ref|ZP_08358969.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA206] gi|331056255|gb|EGI28264.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA206] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|300899219|ref|ZP_07117494.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 198-1] gi|300357175|gb|EFJ73045.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 198-1] Length = 477 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 92 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 148 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189 >gi|294979850|pdb|3ME5|A Chain A, Crystal Structure Of Putative Dna Cytosine Methylase From Shigella Flexneri 2a Str. 301 Length = 482 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 89 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 144 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 145 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 186 >gi|24113334|ref|NP_707844.1| DNA cytosine methylase [Shigella flexneri 2a str. 301] gi|30063396|ref|NP_837567.1| DNA cytosine methylase [Shigella flexneri 2a str. 2457T] gi|110805927|ref|YP_689447.1| DNA cytosine methylase [Shigella flexneri 5 str. 8401] gi|24052347|gb|AAN43551.1| DNA cytosine methylase [Shigella flexneri 2a str. 301] gi|30041648|gb|AAP17376.1| DNA cytosine methylase [Shigella flexneri 2a str. 2457T] gi|110615475|gb|ABF04142.1| DNA cytosine methylase [Shigella flexneri 5 str. 8401] gi|281601397|gb|ADA74381.1| Cytosine-specific methyltransferase [Shigella flexneri 2002017] gi|313650184|gb|EFS14597.1| DNA-cytosine methyltransferase [Shigella flexneri 2a str. 2457T] gi|332756118|gb|EGJ86471.1| DNA-cytosine methyltransferase [Shigella flexneri 4343-70] gi|332757312|gb|EGJ87649.1| DNA-cytosine methyltransferase [Shigella flexneri 2747-71] gi|332757528|gb|EGJ87863.1| DNA-cytosine methyltransferase [Shigella flexneri K-671] gi|332766700|gb|EGJ96904.1| cytosine-specific methyltransferase [Shigella flexneri 2930-71] gi|333003060|gb|EGK22614.1| DNA-cytosine methyltransferase [Shigella flexneri VA-6] gi|333003307|gb|EGK22853.1| DNA-cytosine methyltransferase [Shigella flexneri K-218] gi|333004068|gb|EGK23602.1| DNA-cytosine methyltransferase [Shigella flexneri K-272] gi|333017687|gb|EGK36999.1| DNA-cytosine methyltransferase [Shigella flexneri K-304] gi|333017841|gb|EGK37148.1| DNA-cytosine methyltransferase [Shigella flexneri K-227] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|1171044|sp|P43420|MTB6_BACSF RecName: Full=Modification methylase Bsp6I; Short=M.Bsp6I; AltName: Full=Cytosine-specific methyltransferase Bsp6I gi|547481|emb|CAA57293.1| site-specific DNA-methyltransferase (cytosine-specific) [Bacillus sp.] gi|1098125|prf||2115268B methyltransferase Bsp6IM Length = 315 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 3/83 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML+I LF G+GGI L EQT E +++E + + TYQ+NF N LI DI IK Sbjct: 1 MLQIASLFAGVGGIDLGFEQTGY---FETVWANEYDKNAAITYQSNFKNKLIIDDIRNIK 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +D+PD DVLL+GFPC FS AG Sbjct: 58 VEDVPDFDVLLSGFPCTSFSVAG 80 >gi|171920707|ref|ZP_02931926.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185179015|ref|ZP_02964765.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024024|ref|ZP_02996783.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518336|ref|ZP_03003849.1| cytosine-specific methyltransferase NlaX [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524309|ref|ZP_03004347.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198273488|ref|ZP_03206024.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225550923|ref|ZP_03771872.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551062|ref|ZP_03772008.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903447|gb|EDT49736.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209104|gb|EDU06147.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188019052|gb|EDU57092.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997975|gb|EDU67072.1| cytosine-specific methyltransferase NlaX [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660089|gb|EDX53469.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198250008|gb|EDY74788.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225378877|gb|EEH01242.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225380077|gb|EEH02439.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 319 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF GIGGI +Q + +++EI+ + KTY+ NF ++ L+ GDI I Sbjct: 4 IKVASLFAGIGGICYGFKQA----GAKIVWANEIDRDACKTYRYNFGDSYLVEGDIKNIG 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD D+L GFPCQ FS AG Sbjct: 60 PNDIPDIDILNGGFPCQAFSIAG 82 >gi|320182772|gb|EFW57655.1| DNA-cytosine methyltransferase [Shigella boydii ATCC 9905] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEDVSDEGAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|215487159|ref|YP_002329590.1| DNA cytosine methylase [Escherichia coli O127:H6 str. E2348/69] gi|312967158|ref|ZP_07781376.1| DNA-cytosine methyltransferase [Escherichia coli 2362-75] gi|215265231|emb|CAS09622.1| DNA cytosine methylase [Escherichia coli O127:H6 str. E2348/69] gi|312288622|gb|EFR16524.1| DNA-cytosine methyltransferase [Escherichia coli 2362-75] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|284921868|emb|CBG34943.1| DNA-cytosine methyltransferase [Escherichia coli 042] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKDGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|306814216|ref|ZP_07448382.1| DNA cytosine methylase [Escherichia coli NC101] gi|305852375|gb|EFM52826.1| DNA cytosine methylase [Escherichia coli NC101] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|300994233|ref|ZP_07180788.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1] gi|300304943|gb|EFJ59463.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1] Length = 477 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 92 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 148 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189 >gi|319779706|ref|YP_004130619.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9] gi|317109730|gb|ADU92476.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9] Length = 329 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L DLF GIGG R+ L+ +C FSSE + ++ +TY NF N + DI KI Sbjct: 12 LTFIDLFAGIGGFRVALQS----LGAKCVFSSEWDKFAKETYWLNF-NEIAHDDITKIDE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP+HD+L AGFPCQ FS +G Sbjct: 67 CTIPNHDILCAGFPCQAFSISG 88 >gi|257061088|ref|YP_003138976.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|256591254|gb|ACV02141.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 331 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 44/82 (53%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL EQ +C +S EIN Y K Y NF D+ +I Sbjct: 6 FKFIDLFAGIGGFRLAFEQA----QYQCVYSCEINEYCQKVYYNNFDECPD-NDVTQINP 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +PD DVL AGFPCQPFS G Sbjct: 61 DTLPDFDVLTAGFPCQPFSICG 82 >gi|193071315|ref|ZP_03052233.1| DNA-cytosine methyltransferase [Escherichia coli E110019] gi|331683510|ref|ZP_08384111.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H299] gi|192955357|gb|EDV85842.1| DNA-cytosine methyltransferase [Escherichia coli E110019] gi|331079725|gb|EGI50922.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H299] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|194430436|ref|ZP_03062919.1| DNA-cytosine methyltransferase [Escherichia coli B171] gi|194411515|gb|EDX27854.1| DNA-cytosine methyltransferase [Escherichia coli B171] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|309795932|ref|ZP_07690345.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 145-7] gi|308120382|gb|EFO57644.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 145-7] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|301029418|ref|ZP_07192512.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 196-1] gi|299877722|gb|EFI85933.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 196-1] Length = 476 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 91 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 188 >gi|157414453|ref|YP_001481709.1| hypothetical protein C8J_0133 [Campylobacter jejuni subsp. jejuni 81116] gi|283955585|ref|ZP_06373079.1| hypothetical protein C1336_000030018 [Campylobacter jejuni subsp. jejuni 1336] gi|157385417|gb|ABV51732.1| hypothetical protein C8J_0133 [Campylobacter jejuni subsp. jejuni 81116] gi|283792928|gb|EFC31703.1| hypothetical protein C1336_000030018 [Campylobacter jejuni subsp. jejuni 1336] Length = 321 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF GIGGIR+ + F + +E FSSEI+ ++ +TY NF N L GDI +I Sbjct: 8 LKAIDLFAGIGGIRIGFKNIFQEK-LEFVFSSEIDKFACQTYFCNF-NELPHGDITQINE 65 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +IP H++LLAGFPCQ FS AG Sbjct: 66 NNIPKHNILLAGFPCQAFSIAG 87 >gi|218705454|ref|YP_002412973.1| DNA cytosine methylase [Escherichia coli UMN026] gi|293405443|ref|ZP_06649435.1| DNA cytosine methylase [Escherichia coli FVEC1412] gi|298381087|ref|ZP_06990686.1| DNA cytosine methylase [Escherichia coli FVEC1302] gi|218432551|emb|CAR13444.1| DNA cytosine methylase [Escherichia coli UMN026] gi|291427651|gb|EFF00678.1| DNA cytosine methylase [Escherichia coli FVEC1412] gi|298278529|gb|EFI20043.1| DNA cytosine methylase [Escherichia coli FVEC1302] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|323495143|ref|ZP_08100228.1| DNA-methyltransferase MKpn2kI [Vibrio brasiliensis LMG 20546] gi|323310583|gb|EGA63762.1| DNA-methyltransferase MKpn2kI [Vibrio brasiliensis LMG 20546] Length = 443 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 40/83 (48%), Positives = 49/83 (59%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGGIR Q F C F+SE + ++ KTY N+ GDI KI Sbjct: 84 FTYIDLFAGIGGIR----QPFQELGGHCVFTSEWDKFAQKTYLHNYGEMPN-GDITKICV 138 Query: 62 QD-IPDHDVLLAGFPCQPFSQAG 83 ++ IP+HD+LL GFPCQ FSQAG Sbjct: 139 KEQIPEHDILLGGFPCQAFSQAG 161 >gi|323158561|gb|EFZ44575.1| DNA-cytosine methyltransferase [Escherichia coli E128010] Length = 472 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|238919389|ref|YP_002932904.1| DNA cytosine methylase [Edwardsiella ictaluri 93-146] gi|238868958|gb|ACR68669.1| modification methylase [Edwardsiella ictaluri 93-146] Length = 471 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 94 FRFIDLFAGIGGIRKGFES----IGGQCVFTSEWNKEAVRTYKANWYNDEDLHTFNMDIR 149 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 +I Q IPDHDVLLAGFPCQPFS AG Sbjct: 150 EITLSAESDISEHDAYKNINQHIPDHDVLLAGFPCQPFSLAG 191 >gi|256760956|ref|ZP_05501536.1| type II restriction-modification system methylation subunit [Enterococcus faecalis T3] gi|256682207|gb|EEU21902.1| type II restriction-modification system methylation subunit [Enterococcus faecalis T3] Length = 405 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF GIGG RL + T V+ FSSE + ++ KTY ANF GDI +I Sbjct: 95 YTMIDLFAGIGGTRLGFQLTGK---VKSVFSSEWDKFAQKTYFANFG-EYPHGDITQIDE 150 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + +P+HD+L+AGFPCQ FSQAG Sbjct: 151 KVVPNHDILVAGFPCQAFSQAG 172 >gi|259909642|ref|YP_002649998.1| DNA cytosine methylase [Erwinia pyrifoliae Ep1/96] gi|224965264|emb|CAX56796.1| Cytosine-specific methyltransferase [Erwinia pyrifoliae Ep1/96] gi|261863687|gb|ACY01298.1| unknown [Erwinia pyrifoliae] gi|283479721|emb|CAY75637.1| DNA cytosine methylase [Erwinia pyrifoliae DSM 12163] Length = 473 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E+ +C F+SE N +V+TY+AN+ N DI Sbjct: 96 FRFIDLFAGIGGIRKGFEE----IGGQCVFTSEWNKDAVRTYKANWYNDEEVHRFNFDIR 151 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDRPEVREDDAYRNIDKEIPDHDVLLAGFPCQPFSLAG 193 >gi|188494720|ref|ZP_03001990.1| DNA-cytosine methyltransferase [Escherichia coli 53638] gi|188489919|gb|EDU65022.1| DNA-cytosine methyltransferase [Escherichia coli 53638] Length = 472 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|307138628|ref|ZP_07497984.1| DNA cytosine methylase [Escherichia coli H736] gi|331642581|ref|ZP_08343716.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H736] gi|331039379|gb|EGI11599.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H736] Length = 472 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKDGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|323152708|gb|EFZ38980.1| DNA-cytosine methyltransferase [Escherichia coli EPECa14] Length = 374 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|166367724|ref|YP_001659997.1| modification methylase NgoBI [Microcystis aeruginosa NIES-843] gi|166090097|dbj|BAG04805.1| modification methylase NgoBI [Microcystis aeruginosa NIES-843] Length = 330 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 3/84 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ++ DLFCG+GG R+ +EQ +N+E C FS +I+ + Y ANF + GDI +I Sbjct: 10 IRFVDLFCGLGGFRVAIEQVCRQKNLESDCVFSCDIDKDARSIYHANFGDQPQ-GDITEI 68 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 DIP+HD+L+AGFPCQPFS G Sbjct: 69 AALDIPNHDILMAGFPCQPFSICG 92 >gi|323968854|gb|EGB64190.1| DNA-cytosine methyltransferase [Escherichia coli TA007] Length = 272 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF GIGG RL QT V FSSE + ++ KTY AN+ + GDI KI Sbjct: 72 YRMIDLFAGIGGTRLGFHQT---NAVNVVFSSEWDKFAQKTYHANYGD-FPDGDITKIDE 127 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIPDH++L+ GFPC FSQAG Sbjct: 128 KDIPDHEILVGGFPCVAFSQAG 149 >gi|325499566|gb|EGC97425.1| DNA cytosine methylase [Escherichia fergusonii ECD227] Length = 473 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 96 FRFIDLFAGIGGIRKGFEA----IGGQCVFTSEWNKEAVRTYKANWYNDESSHTFNHDIR 151 Query: 58 KIKTQ----------------DIPDHDVLLAGFPCQPFSQAG 83 ++ IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSADDTVSEKQAYAHIQRHIPDHDVLLAGFPCQPFSLAG 193 >gi|324112381|gb|EGC06359.1| DNA-cytosine methyltransferase [Escherichia fergusonii B253] Length = 473 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 96 FRFIDLFAGIGGIRKGFEA----IGGQCVFTSEWNKEAVRTYKANWYNDESSHTFNHDIR 151 Query: 58 KIKTQ----------------DIPDHDVLLAGFPCQPFSQAG 83 ++ IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSADDTVSEKQAYAHIQRHIPDHDVLLAGFPCQPFSLAG 193 >gi|218551294|ref|YP_002385086.1| DNA cytosine methylase [Escherichia fergusonii ATCC 35469] gi|218358836|emb|CAQ91493.1| DNA modification methylase [Escherichia fergusonii ATCC 35469] Length = 485 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 108 FRFIDLFAGIGGIRKGFEA----IGGQCVFTSEWNKEAVRTYKANWYNDESSHTFNHDIR 163 Query: 58 KIKTQ----------------DIPDHDVLLAGFPCQPFSQAG 83 ++ IPDHDVLLAGFPCQPFS AG Sbjct: 164 EVTLSADDTVSEKQAYAHIQRHIPDHDVLLAGFPCQPFSLAG 205 >gi|194433657|ref|ZP_03065933.1| DNA-cytosine methyltransferase [Shigella dysenteriae 1012] gi|194418086|gb|EDX34179.1| DNA-cytosine methyltransferase [Shigella dysenteriae 1012] gi|332095525|gb|EGJ00541.1| DNA-cytosine methyltransferase [Shigella dysenteriae 155-74] Length = 472 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEGAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|324018843|gb|EGB88062.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 117-3] Length = 472 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I + IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVNDEAAAEHIRKHIPEHDVLLAGFPCQPFSLAG 184 >gi|300951590|ref|ZP_07165422.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 116-1] gi|300449174|gb|EFK12794.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 116-1] Length = 478 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 93 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 148 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I + IP+HDVLLAGFPCQPFS AG Sbjct: 149 DITLSHKEGVSDEAAAEHIRKHIPEHDVLLAGFPCQPFSLAG 190 >gi|300956520|ref|ZP_07168803.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 175-1] gi|300316661|gb|EFJ66445.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 175-1] Length = 477 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 92 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I + IP+HDVLLAGFPCQPFS AG Sbjct: 148 DITLSHKEGVSDEAAAEHIRKHIPEHDVLLAGFPCQPFSLAG 189 >gi|170769440|ref|ZP_02903893.1| DNA-cytosine methyltransferase [Escherichia albertii TW07627] gi|170121764|gb|EDS90695.1| DNA-cytosine methyltransferase [Escherichia albertii TW07627] Length = 472 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANYYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDAAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|170019707|ref|YP_001724661.1| DNA cytosine methylase [Escherichia coli ATCC 8739] gi|169754635|gb|ACA77334.1| DNA-cytosine methyltransferase [Escherichia coli ATCC 8739] gi|323940380|gb|EGB36571.1| DNA-cytosine methyltransferase [Escherichia coli E482] gi|332093084|gb|EGI98148.1| DNA-cytosine methyltransferase [Shigella boydii 5216-82] Length = 472 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I + IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRKHIPEHDVLLAGFPCQPFSLAG 184 >gi|288928693|ref|ZP_06422539.1| modification methylase NgoBI (Cytosine-specific methyltransferase NgoBI) [Prevotella sp. oral taxon 317 str. F0108] gi|288329677|gb|EFC68262.1| modification methylase NgoBI (Cytosine-specific methyltransferase NgoBI) [Prevotella sp. oral taxon 317 str. F0108] Length = 309 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 41/83 (49%), Positives = 52/83 (62%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++ DLF GIGGIR+ + +C FSSE + + KTY ANF + + GDI KI Sbjct: 1 MVRYVDLFAGIGGIRIPF----DELGAQCVFSSEWDKAACKTYAANFGD-IPSGDITKIA 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +DIP H +LLAGFPCQ FS G Sbjct: 56 AEDIPPHQLLLAGFPCQAFSIMG 78 >gi|218695565|ref|YP_002403232.1| DNA cytosine methylase [Escherichia coli 55989] gi|256022383|ref|ZP_05436248.1| DNA cytosine methylase [Escherichia sp. 4_1_40B] gi|218352297|emb|CAU98056.1| DNA cytosine methylase [Escherichia coli 55989] gi|323972739|gb|EGB67939.1| DNA-cytosine methyltransferase [Escherichia coli TA007] gi|332343686|gb|AEE57020.1| DNA-cytosine methyltransferase [Escherichia coli UMNK88] Length = 472 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|186476891|ref|YP_001858361.1| DNA-cytosine methyltransferase [Burkholderia phymatum STM815] gi|184193350|gb|ACC71315.1| DNA-cytosine methyltransferase [Burkholderia phymatum STM815] Length = 428 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 40/88 (45%), Positives = 50/88 (56%), Gaps = 12/88 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--------PNTLIFGD 55 DLF GIGGIR+ E +C F+SE N +S KTY+ NF P + GD Sbjct: 73 FIDLFAGIGGIRMGFEA----HGGQCVFTSEWNVFSQKTYRENFGEHCGDAAPQHTLIGD 128 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I + +P+HD+LL GFPCQPFS AG Sbjct: 129 IVTFPAEAVPEHDILLGGFPCQPFSIAG 156 >gi|331671799|ref|ZP_08372595.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli TA280] gi|331070788|gb|EGI42147.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli TA280] Length = 474 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E + +C F+SE N +V+TY+AN+ N + DI Sbjct: 96 FRFIDLFAGIGGIRKGFE----NIGGQCVFTSEWNKEAVRTYKANWFNDELNHKFNLDIR 151 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDRDDVSEMEAYNHIDKNIPDHDVLLAGFPCQPFSLAG 193 >gi|317497297|ref|ZP_07955620.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium 5_1_63FAA] gi|316895366|gb|EFV17525.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium 5_1_63FAA] Length = 385 Score = 127 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIR ++ + +SSE + ++ KTY+ NF + GDI + Sbjct: 72 FKQIDLFAGIGGIRQAFQRQGGYN----VYSSEWDKFAQKTYRINFG-EIPDGDITLVSE 126 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFSQAG Sbjct: 127 NDIPDHDILLAGFPCQPFSQAG 148 >gi|218900599|ref|YP_002449010.1| modification methylase HaeIII [Bacillus cereus G9842] gi|218543463|gb|ACK95857.1| modification methylase HaeIII [Bacillus cereus G9842] Length = 313 Score = 127 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L Q + + ++++I+ +V+TY+ N N ++ D+ ++ T Sbjct: 1 MKVISLFSGAGGLDLGFVQAGH----QIIWANDIDKDAVETYKKNLGNHIVLKDLKEVDT 56 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 DIPD D+++ GFPCQ FS A Sbjct: 57 NDIPDADIVIGGFPCQGFSVA 77 >gi|172038109|ref|YP_001804610.1| putative modification methylase [Cyanothece sp. ATCC 51142] gi|171699563|gb|ACB52544.1| putative modification methylase [Cyanothece sp. ATCC 51142] Length = 344 Score = 127 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 8/89 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE-------CFFSSEINPYSVKTYQANFPNTLIFG 54 LK DLFCGIGG R+ LE + ++ C FSS+I+P + K Y+ANF G Sbjct: 16 LKYIDLFCGIGGFRIALESVCSQYRLKDKKIESICVFSSDIDPDAKKNYEANFKEKPQ-G 74 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI KI + IP HD+LLAGFPCQPFS G Sbjct: 75 DITKIPIESIPKHDLLLAGFPCQPFSICG 103 >gi|331645413|ref|ZP_08346517.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli M605] gi|331045575|gb|EGI17701.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli M605] Length = 474 Score = 127 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N + DI Sbjct: 96 FRFIDLFAGIGGIRKGFES----IGGQCVFTSEWNKEAVRTYKANWFNDELNHKFNLDIR 151 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDRDDVSEMEAYNHIDKNIPDHDVLLAGFPCQPFSLAG 193 >gi|167465361|ref|ZP_02330450.1| DNA-cytosine methyltransferase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 432 Score = 127 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 M +LF GIGG R L+Q C F+SEI+ ++ +Y+A + + GDI KI Sbjct: 1 MFTYVELFAGIGGFRSALDQ----LGGICTFASEIDKFATISYRAMYDGAPELCGDITKI 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 D+PDHD+L+ GFPCQ FS AG Sbjct: 57 DASDVPDHDLLVGGFPCQAFSVAG 80 >gi|327254549|gb|EGE66165.1| modification methylase EcoRII [Escherichia coli STEC_7v] Length = 474 Score = 127 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E + +C F+SE N +V+TY+AN+ N + DI Sbjct: 96 FRFIDLFAGIGGIRKGFE----NIGGQCVFTSEWNKEAVRTYKANWFNDELNHKFNLDIR 151 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDRDDVSEVEAYNHIDKNIPDHDVLLAGFPCQPFSLAG 193 >gi|331668651|ref|ZP_08369499.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA271] gi|331063845|gb|EGI35756.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA271] Length = 458 Score = 127 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 73 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 128 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 129 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 170 >gi|24527985|emb|CAD33712.1| putative DNA methylase [Escherichia coli] Length = 314 Score = 127 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L + + ++++I+ +V TY+ N + ++ D+++I Sbjct: 1 MKVVSLFSGAGGLDLGFKNA----GFQIVWANDIDSDAVLTYKKNIGDHIVLRDLSQIDM 56 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 DIPD DV++ GFPCQ FSQA Sbjct: 57 DDIPDCDVVIGGFPCQGFSQA 77 >gi|169334482|ref|ZP_02861675.1| hypothetical protein ANASTE_00885 [Anaerofustis stercorihominis DSM 17244] gi|169259199|gb|EDS73165.1| hypothetical protein ANASTE_00885 [Anaerofustis stercorihominis DSM 17244] Length = 337 Score = 127 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 2/83 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 ++ DLF GIGGIRL E F N+E F SE + Y+ KTY NF + I GDI +I Sbjct: 6 IRSIDLFAGIGGIRLGFENVFKD-NIETVFVSEWDKYAKKTYMENFNDDFEIAGDITEID 64 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IP+ D+ LAGFPCQ FS AG Sbjct: 65 ETSIPNFDICLAGFPCQAFSLAG 87 >gi|329768652|ref|ZP_08260136.1| hypothetical protein HMPREF0428_01833 [Gemella haemolysans M341] gi|328836366|gb|EGF86031.1| hypothetical protein HMPREF0428_01833 [Gemella haemolysans M341] Length = 427 Score = 127 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 + DLF GIGG RL +E+ + +C EI+ ++ +Y+ N N + + DI ++ Sbjct: 1 MNFLDLFAGIGGFRLGMERAGH----KCVGFCEIDKFARSSYKVMHNTENEIEYHDIKEV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 ++ DV+ GFPCQ FS AG Sbjct: 57 TNEEFRKLRAKVDVICGGFPCQAFSIAG 84 >gi|307729019|ref|YP_003906243.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1003] gi|307583554|gb|ADN56952.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1003] Length = 428 Score = 127 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 42/86 (48%), Positives = 47/86 (54%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 + DLF GIGGIR E C F+SE N +S KTYQ N + GDI Sbjct: 73 FRFIDLFAGIGGIRRGFEA----HGGRCVFTSEWNEFSKKTYQQNHRDPDDAHQFVGDIV 128 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 Q +P HDVLLAGFPCQPFS AG Sbjct: 129 SFPEQSVPSHDVLLAGFPCQPFSIAG 154 >gi|323191533|gb|EFZ76794.1| modification methylase EcoRII [Escherichia coli RN587/1] Length = 474 Score = 127 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N + DI Sbjct: 96 FRFIDLFAGIGGIRKGFES----IGGQCVFTSEWNKEAVRTYKANWFNDELNHKFNLDIR 151 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDRDDVSEMEAYNHIDKNIPDHDVLLAGFPCQPFSLAG 193 >gi|254409526|ref|ZP_05023307.1| DNA-cytosine methyltransferase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196183523|gb|EDX78506.1| DNA-cytosine methyltransferase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 437 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 45/84 (53%), Positives = 52/84 (61%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ++ DLF GIGGIRL EQ N N EC +SEI+P Y+ NF N + GDI KI Sbjct: 4 IRFIDLFAGIGGIRLAFEQAANTLNYKTECVLASEISPDCQWVYKNNF-NHEVLGDIRKI 62 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +P HDVLLAGFPCQ FS AG Sbjct: 63 N--QLPPHDVLLAGFPCQSFSYAG 84 >gi|82776352|ref|YP_402701.1| DNA cytosine methylase [Shigella dysenteriae Sd197] gi|309789422|ref|ZP_07684012.1| DNA-cytosine methyltransferase [Shigella dysenteriae 1617] gi|81240500|gb|ABB61210.1| DNA cytosine methylase [Shigella dysenteriae Sd197] gi|308922816|gb|EFP68333.1| DNA-cytosine methyltransferase [Shigella dysenteriae 1617] Length = 472 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHRFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|238801891|ref|YP_002925094.1| putative DNA methylase [Streptococcus phage 5093] gi|238558577|gb|ACR45907.1| putative DNA methylase [Streptococcus phage 5093] Length = 319 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+ N + DI ++ Sbjct: 1 MKFIDLFAGIGGFRLGMESAGH----ECVGFCEIDKFARASYKAIHNTEGEIELHDITQV 56 Query: 60 KTQDIPD---HDVLLAGFPCQPFSQAG 83 +I + D + GFPCQ FS AG Sbjct: 57 TDDEIREIGHVDAICGGFPCQAFSIAG 83 >gi|238898088|ref|YP_002923769.1| DNA cytosine methylase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465848|gb|ACQ67622.1| DNA cytosine methylase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 401 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 43/83 (51%), Positives = 52/83 (62%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 + DLF GIGGIR+ + + EC F+SE N +S KTY N+ F GDI Sbjct: 49 FRFIDLFAGIGGIRMGFDA----QGGECVFTSEWNRFSKKTYIQNYGAPHPFVGDIVPYP 104 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +D+PDHDVLLAGFPCQPFS AG Sbjct: 105 AEDVPDHDVLLAGFPCQPFSIAG 127 >gi|218439218|ref|YP_002377547.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] gi|218171946|gb|ACK70679.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] Length = 323 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+++ LF G GG+ L E ++++I+ + +TYQ N + +I DI I Sbjct: 1 MIRVVSLFSGCGGMDLGFIWA----GYEIVWANDIDHDACETYQLNIGDHIIEDDIKNIN 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81 + +P+ D++L GFPCQ FS Sbjct: 57 FKHLPECDLILGGFPCQDFSM 77 >gi|323525262|ref|YP_004227415.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1001] gi|323382264|gb|ADX54355.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1001] Length = 428 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 42/86 (48%), Positives = 46/86 (53%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57 + DLF GIGGIR E C F+SE N +S KTYQ N GDI Sbjct: 73 FRFIDLFAGIGGIRRGFEA----HGGRCVFTSEWNEFSKKTYQQNHRDADGTHQFVGDIV 128 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 D+P HDVLLAGFPCQPFS AG Sbjct: 129 SFAENDVPAHDVLLAGFPCQPFSIAG 154 >gi|331091354|ref|ZP_08340194.1| hypothetical protein HMPREF9477_00837 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404515|gb|EGG84059.1| hypothetical protein HMPREF9477_00837 [Lachnospiraceae bacterium 2_1_46FAA] Length = 391 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 K DLF GIGG Q ++ EC F+SEI+ Y+++TY+ N+ + G +I + Sbjct: 5 FKFIDLFAGIGGFH----QAMHNLGGECVFASEIDKYAIETYKTNYG--VDAGINIRDVH 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +DIP+HDVL AGFPCQ FS+AG Sbjct: 59 EEDIPEHDVLCAGFPCQAFSKAG 81 >gi|261337441|ref|ZP_05965325.1| modification methylase HpaII [Bifidobacterium gallicum DSM 20093] gi|270277829|gb|EFA23683.1| modification methylase HpaII [Bifidobacterium gallicum DSM 20093] Length = 442 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 40/83 (48%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 + DLF GIGGIR H FSSE N +S +TY+ N+ + GDI ++ Sbjct: 73 FRTIDLFAGIGGIRRGFATAGGHA----VFSSEWNEFSTRTYRTNYGFAETMAGDITQVD 128 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD DV+LAGFPCQPFS AG Sbjct: 129 ANDIPDCDVVLAGFPCQPFSLAG 151 >gi|327403407|ref|YP_004344245.1| DNA-cytosine methyltransferase [Fluviicola taffensis DSM 16823] gi|327318915|gb|AEA43407.1| DNA-cytosine methyltransferase [Fluviicola taffensis DSM 16823] Length = 422 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 51/84 (60%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL L+ + +C F+SE + + KTYQANF + FGDI K T Sbjct: 97 FKFIDLFAGIGGFRLALQ----NLGGKCVFTSEWDEQAKKTYQANFG-EIPFGDITKDST 151 Query: 62 QD-IPD-HDVLLAGFPCQPFSQAG 83 + IPD DVL GFPCQ FS AG Sbjct: 152 KAFIPDGFDVLCGGFPCQAFSIAG 175 >gi|322383485|ref|ZP_08057261.1| hypothetical protein PL1_3347 [Paenibacillus larvae subsp. larvae B-3650] gi|321152224|gb|EFX45054.1| hypothetical protein PL1_3347 [Paenibacillus larvae subsp. larvae B-3650] Length = 425 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 M +LF GIGG R L+Q C F+SEI+ ++ +Y+A + + GDI KI Sbjct: 1 MFTYVELFAGIGGFRSALDQ----LGGICTFASEIDKFATISYRAMYDGAPELHGDITKI 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +D+P+HD+L+ GFPCQ FS AG Sbjct: 57 DAKDVPEHDLLVGGFPCQAFSVAG 80 >gi|119484300|ref|ZP_01618917.1| modification methylase NlaIV [Lyngbya sp. PCC 8106] gi|119457774|gb|EAW38897.1| modification methylase NlaIV [Lyngbya sp. PCC 8106] Length = 449 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 MLK DLF GIGG+RL E+ EC +SEI+ + + Y NF + GDI + Sbjct: 1 MLKFIDLFAGIGGLRLGFERGIASLGLRGECLLASEIDAEASQVYSQNF-LHVPEGDIRQ 59 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 IK+ +P HDVLLAGFPCQ FS AG Sbjct: 60 IKS--LPKHDVLLAGFPCQSFSYAG 82 >gi|315931535|gb|EFV10502.1| DNA (cytosine-5) methyltransferase [Campylobacter jejuni subsp. jejuni 327] Length = 284 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF GIGGIR+ + F + +E FSSEI+ ++ +TY NF N L GDI +I Sbjct: 8 LKAIDLFAGIGGIRIGFKNIFQEK-LEFVFSSEIDKFACQTYFCNF-NELPHGDITQINE 65 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +IP H++LLAGFPCQ FS AG Sbjct: 66 NNIPKHNILLAGFPCQAFSIAG 87 >gi|48243617|gb|AAT40769.1| putative DNA methylase [Haemophilus influenzae] Length = 293 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG+ L +Q ++++ + +V+TY+ N + GDI KI + Sbjct: 5 LTVISLFSGAGGLDLGFKQA----GFNLIWANDFDKDAVETYKENIGKECVLGDITKIPS 60 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 +IP+ DV++ GFPCQ FS A Sbjct: 61 SEIPNADVMIGGFPCQGFSMA 81 >gi|291283137|ref|YP_003499955.1| DNA-cytosine methyltransferase [Escherichia coli O55:H7 str. CB9615] gi|209766674|gb|ACI81649.1| DNA cytosine methylase [Escherichia coli] gi|290763010|gb|ADD56971.1| DNA-cytosine methyltransferase [Escherichia coli O55:H7 str. CB9615] Length = 472 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF G+GGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 87 FRFIDLFAGVGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|323650448|gb|ADX97301.1| M.Fnu4HI [Fusobacterium nucleatum] Length = 351 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 3/83 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K+ LF G+GGI L EQT + + + +E + + +T++ NF N L DI ++ Sbjct: 1 MYKVASLFAGVGGIDLGFEQTGH---FKTVWXNEYDDKARETFRCNFSNKLNENDIREVD 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 Q+IPD D+LL+GFPC FS AG Sbjct: 58 VQEIPDIDILLSGFPCTSFSVAG 80 >gi|157368818|ref|YP_001476807.1| DNA cytosine methylase [Serratia proteamaculans 568] gi|157320582|gb|ABV39679.1| DNA-cytosine methyltransferase [Serratia proteamaculans 568] Length = 491 Score = 126 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57 + DLF GIGGIR E+ +C F+SE N +V+TY+AN+ + DI Sbjct: 112 FRFIDLFAGIGGIRKGFEE----IGGQCVFTSEWNKEAVRTYKANWYCDPAHHKFNSDIR 167 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 +I ++IPDHDVLLAGFPCQPFS AG Sbjct: 168 EITLSENDDISDQEAYKNIDKEIPDHDVLLAGFPCQPFSLAG 209 >gi|156933419|ref|YP_001437335.1| DNA cytosine methylase [Cronobacter sakazakii ATCC BAA-894] gi|156531673|gb|ABU76499.1| hypothetical protein ESA_01237 [Cronobacter sakazakii ATCC BAA-894] Length = 481 Score = 126 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 98 FRFIDLFAGIGGIRSGFEAA----GGQCVFTSEWNKHAVRTYKANWYCDPQQHQFNEDIR 153 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 + IP HDVLLAGFPCQPFS AG Sbjct: 154 DVTLSHKPEISDEAAAEHIRACIPQHDVLLAGFPCQPFSLAG 195 >gi|315637499|ref|ZP_07892709.1| modification methylase EcoRII [Arcobacter butzleri JV22] gi|315478217|gb|EFU68940.1| modification methylase EcoRII [Arcobacter butzleri JV22] Length = 326 Score = 126 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIR E+ F + E F+SE++ Y+ Y N+ N +GDI KI Sbjct: 20 YKFIDLFAGIGGIRTGFEKVFKEES-EFVFASELDRYAQIAYFENY-NEKPYGDITKINE 77 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIP+HD++LAGFPCQ FS AG Sbjct: 78 EDIPNHDIVLAGFPCQAFSIAG 99 >gi|291463698|pdb|3LX6|A Chain A, Structure Of Probable Cytosine-Specific Methyltransferase From Shigella Flexneri gi|291463699|pdb|3LX6|B Chain B, Structure Of Probable Cytosine-Specific Methyltransferase From Shigella Flexneri Length = 410 Score = 126 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN P T F DI Sbjct: 27 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 82 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 83 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 124 >gi|225858823|ref|YP_002740333.1| methyl transferase [Streptococcus pneumoniae 70585] gi|225720620|gb|ACO16474.1| methyl transferase [Streptococcus pneumoniae 70585] Length = 451 Score = 126 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A F + + DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGMEA----QGHECLGFCEIDKFARTSYKAMFKTEEEIEYHDIKEV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 DI DV+ GFPCQ FS AG Sbjct: 57 TDHDIRQFRGQVDVICGGFPCQAFSLAG 84 >gi|323977859|gb|EGB72945.1| DNA-cytosine methyltransferase [Escherichia coli TW10509] Length = 472 Score = 126 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANYYCDPAVHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGIGDDAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|319746106|gb|EFV98380.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus agalactiae ATCC 13813] Length = 458 Score = 126 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 +K DLF GIGG RL L ++ EC EI+ ++ K+Y+A + + F DI ++ Sbjct: 4 MKFLDLFAGIGGFRLGL----TNQGHECIGFCEIDKFARKSYKAIYKTEGEIEFHDIRQV 59 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 60 TDQDFRQLRGQVDIICGGFPCQAFSLAG 87 >gi|294646710|ref|ZP_06724334.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CC 2a] gi|294807186|ref|ZP_06766001.1| DNA (cytosine-5-)-methyltransferase [Bacteroides xylanisolvens SD CC 1b] gi|292637950|gb|EFF56344.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CC 2a] gi|294445609|gb|EFG14261.1| DNA (cytosine-5-)-methyltransferase [Bacteroides xylanisolvens SD CC 1b] Length = 445 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 41/84 (48%), Positives = 49/84 (58%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK-IK 60 DLF G+GG RL ++ + +C FSSE N Y+ KTY ANF FGDI K + Sbjct: 113 FTFIDLFAGMGGFRLAMQA----QGGKCVFSSEWNKYAQKTYLANFGEMP-FGDITKEVT 167 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 IP D+L AGFPCQPFS AG Sbjct: 168 KSYIPQYFDILCAGFPCQPFSIAG 191 >gi|323968376|gb|EGB63783.1| DNA-cytosine methyltransferase [Escherichia coli M863] gi|327253092|gb|EGE64746.1| DNA-cytosine methyltransferase [Escherichia coli STEC_7v] Length = 472 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANYYCDPAVHHFNEDIR 142 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHKEGIGDDAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|114571596|ref|YP_758276.1| DNA-cytosine methyltransferase [Maricaulis maris MCS10] gi|114342058|gb|ABI67338.1| DNA-cytosine methyltransferase [Maricaulis maris MCS10] Length = 406 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + DLF GIGG+RL E +C F+SE + +S +TY+ANF + GDI Sbjct: 66 FRFIDLFAGIGGLRLGFEA----IGGKCVFTSEWDVHSQRTYRANFLDDDSHTFAGDIRP 121 Query: 59 I--KTQDIPDHDVLLAGFPCQPFSQAG 83 +P+HDVLLAGFPCQPFS AG Sbjct: 122 YGTDPSKVPEHDVLLAGFPCQPFSLAG 148 >gi|157145245|ref|YP_001452564.1| DNA cytosine methylase [Citrobacter koseri ATCC BAA-895] gi|157082450|gb|ABV12128.1| hypothetical protein CKO_00981 [Citrobacter koseri ATCC BAA-895] Length = 477 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 92 FRFVDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYYCDPQRHHFNEDIR 147 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 148 DITLSHRDGVSDSEAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189 >gi|307570754|emb|CAR83933.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes L99] gi|307572166|emb|CAR85345.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes L99] Length = 426 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 +K DLF GIGG RL +E+ + EC EI+ ++ K+YQA DI K+ Sbjct: 1 MKFLDLFAGIGGFRLGMERAGH----ECVGYVEIDKFARKSYQAIHDTEGEWTREDITKV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 ++ D++ GFPCQ FS AG Sbjct: 57 TDEEWRTLRGTVDIICGGFPCQSFSIAG 84 >gi|307152045|ref|YP_003887429.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306982273|gb|ADN14154.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 323 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 4/81 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+K+ LF G GG+ L + + ++++I+ + +TY+ N + +I D+ I Sbjct: 1 MIKVISLFSGCGGMDLGFKWA----GYQIIWANDIDHDACETYKRNIGDHIIKDDVKNIN 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81 + +PD D++L GFPCQ FS Sbjct: 57 FEQLPDCDLILGGFPCQDFSM 77 >gi|85709931|ref|ZP_01040996.1| Type II restriction-modification system methylation subunit [Erythrobacter sp. NAP1] gi|85688641|gb|EAQ28645.1| Type II restriction-modification system methylation subunit [Erythrobacter sp. NAP1] Length = 370 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGG+R+ ++ EC FSSE + ++ TY+ NF + GDI KI Sbjct: 22 FTFIDLFAGIGGMRIPFDE----LGGECTFSSEWDKFAQDTYELNFGHRPN-GDITKIDA 76 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ HD+LL GFPCQ FS AG Sbjct: 77 SEVGAHDILLGGFPCQAFSNAG 98 >gi|312863775|ref|ZP_07724013.1| DNA (cytosine-5-)-methyltransferase [Streptococcus vestibularis F0396] gi|311101311|gb|EFQ59516.1| DNA (cytosine-5-)-methyltransferase [Streptococcus vestibularis F0396] Length = 454 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 +K DLF GIGG RL L + + EC EI+ ++ K+Y+A + + F DI ++ Sbjct: 4 MKFLDLFAGIGGFRLGLTR----QGHECIGFCEIDKFARKSYKAIYKTEGEIEFHDIRQV 59 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 60 TDQDFRQLRGQVDIICGGFPCQAFSLAG 87 >gi|296538000|gb|ADH30019.1| EcoRII cytosine methylase [Escherichia coli O25b:H4 str. EC958] Length = 477 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 96 FRFIDLFAGIGGIRKGFE----TIGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 151 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D +PDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 193 >gi|160431610|ref|YP_001551777.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Dublin] gi|298206539|ref|YP_003717476.1| EcoRII modification enzyme [Escherichia coli] gi|159885479|dbj|BAF93082.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Dublin] gi|296537944|gb|ADH29964.1| EcoRII modification enzyme [Escherichia coli O25b:H4 str. EC958] Length = 477 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 96 FRFIDLFAGIGGIRKGFE----TIGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 151 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D +PDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 193 >gi|133756232|ref|YP_001096382.1| DNA cytosine methylase [Escherichia coli] gi|110084067|gb|ABG49221.1| hypothetical protein [Escherichia coli] Length = 566 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 185 FRFIDLFAGIGGIRKGFE----TIGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 240 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D +PDHDVLLAGFPCQPFS AG Sbjct: 241 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 282 >gi|145638078|ref|ZP_01793692.1| putative type II 5-cytosoine methyltransferase [Haemophilus influenzae PittHH] gi|145268726|gb|EDK08715.1| putative type II 5-cytosoine methyltransferase [Haemophilus influenzae PittHH] Length = 226 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG+ L +Q ++++ + +V+TY+ N + GDI KI + Sbjct: 6 LTVISLFSGAGGLDLGFKQA----GFNLIWANDFDKDAVETYKENIGKECVLGDITKIPS 61 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 +IP+ DV++ GFPCQ FS A Sbjct: 62 SEIPNADVMIGGFPCQGFSMA 82 >gi|167761084|ref|ZP_02433211.1| hypothetical protein CLOSCI_03482 [Clostridium scindens ATCC 35704] gi|167661318|gb|EDS05448.1| hypothetical protein CLOSCI_03482 [Clostridium scindens ATCC 35704] Length = 405 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 DLF GIGG Q + C F+SEI+ Y ++TYQ N+ ++ I DI + Sbjct: 23 FTFIDLFSGIGGFH----QAMSSLGGRCVFASEIDKYCIETYQENYGMDSGI--DIRNVD 76 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +DIP HDVL AGFPCQ FS+AG Sbjct: 77 EKDIPPHDVLCAGFPCQAFSKAG 99 >gi|307139342|ref|ZP_07498698.1| DNA cytosine methylase [Escherichia coli H736] Length = 477 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 96 FRFIDLFAGIGGIRKGFEA----IGGQCVFTSEWNKDAVRTYKANWFNDEQVHKFNLDIR 151 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D +PDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDKTDVLETDAYAYIDEHVPDHDVLLAGFPCQPFSLAG 193 >gi|113706802|ref|YP_724464.1| DNA cytosine methylase [Escherichia coli] gi|190576899|ref|YP_001966231.1| M.EcoRII DNA methylase [Klebsiella pneumoniae] gi|194433606|ref|ZP_03065883.1| modification methylase EcoRII [Shigella dysenteriae 1012] gi|209901141|ref|YP_002286923.1| DNA cytosine methylase [Klebsiella pneumoniae] gi|209901236|ref|YP_002287017.1| DNA cytosine methylase [Klebsiella pneumoniae] gi|215528089|ref|YP_002332862.1| EcoRII cytosine methylase [Klebsiella pneumoniae] gi|302141639|ref|YP_003813098.1| EcoRII methylase [Klebsiella pneumoniae] gi|127448|sp|P05101|MTE2_ECOLX RecName: Full=Modification methylase EcoRII; Short=M.EcoRII; AltName: Full=Cytosine-specific methyltransferase EcoRII gi|41317|emb|CAA28725.1| unnamed protein product [Escherichia coli HB101] gi|109390538|gb|ABG33840.1| EcoRII modification enzyme [Escherichia coli] gi|110264483|gb|ABG56846.1| M.EcoRII DNA methylase [Klebsiella pneumoniae] gi|165928612|gb|ABY74380.1| EcoRII cytosine methylase [Klebsiella pneumoniae] gi|194418198|gb|EDX34290.1| modification methylase EcoRII [Shigella dysenteriae 1012] gi|197092209|gb|ACH42172.1| EcoRII cytosine methylase [Klebsiella pneumoniae] gi|209574187|gb|ACI63075.1| modification methylase [Klebsiella pneumoniae] gi|209574298|gb|ACI63184.1| modification methylase [Klebsiella pneumoniae] gi|296033904|gb|ADG84867.1| EcoRII methylase [Klebsiella pneumoniae] Length = 477 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 96 FRFIDLFAGIGGIRKGFE----TIGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 151 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D +PDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 193 >gi|323960520|gb|EGB56149.1| DNA-cytosine methyltransferase [Escherichia coli H489] Length = 477 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 96 FRFIDLFAGIGGIRKGFEA----IGGQCVFTSEWNKDAVRTYKANWFNDEQVHKFNLDIR 151 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D +PDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSDKTDVLETDAYAYIDEHVPDHDVLLAGFPCQPFSLAG 193 >gi|297622183|ref|YP_003675732.1| EcoRII cytosine-methyltransferase [Klebsiella oxytoca KOX105] gi|296492002|gb|ADH29504.1| EcoRII cytosine-methyltransferase [Klebsiella oxytoca KOX105] Length = 491 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 110 FRFIDLFAGIGGIRKGFE----TIGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 165 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D +PDHDVLLAGFPCQPFS AG Sbjct: 166 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 207 >gi|227485932|ref|ZP_03916248.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC 51172] gi|227235977|gb|EEI85992.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC 51172] Length = 358 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF G+GG L + + F+SEI+ ++ K+Y +NF ++GDI KI Sbjct: 5 IKIASLFSGVGGFEEGLRLA--KIDFDLVFASEIDRFAQKSYSSNFDTDNLYGDITKINE 62 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++IPDHD+LLAGFPCQ FS AG Sbjct: 63 KNIPDHDLLLAGFPCQSFSIAG 84 >gi|262043463|ref|ZP_06016586.1| DNA (cytosine-5-)-methyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039205|gb|EEW40353.1| DNA (cytosine-5-)-methyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 477 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 92 FRFIDLFAGIGGIRSGFEA----IGGQCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 147 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I + IP HDVLLAGFPCQPFS AG Sbjct: 148 DITLSQRSDVSDEEAARHIRESIPQHDVLLAGFPCQPFSLAG 189 >gi|238895488|ref|YP_002920223.1| DNA cytosine methylase [Klebsiella pneumoniae NTUH-K2044] gi|330000908|ref|ZP_08303852.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. MS 92-3] gi|238547805|dbj|BAH64156.1| DNA cytosine methylase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328537840|gb|EGF64032.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. MS 92-3] Length = 477 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 92 FRFIDLFAGIGGIRSGFEA----IGGQCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 147 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I + IP HDVLLAGFPCQPFS AG Sbjct: 148 DITLSQRSDVSDEEAARHIRESIPQHDVLLAGFPCQPFSLAG 189 >gi|152970972|ref|YP_001336081.1| DNA cytosine methylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955821|gb|ABR77851.1| DNA cytosine methylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 477 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 92 FRFIDLFAGIGGIRSGFEA----IGGQCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 147 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I + IP HDVLLAGFPCQPFS AG Sbjct: 148 DITLSQRSDVSDEEAARHIRESIPQHDVLLAGFPCQPFSLAG 189 >gi|25011412|ref|NP_735807.1| hypothetical protein gbs1370 [Streptococcus agalactiae NEM316] gi|24412950|emb|CAD47029.1| unknown [Streptococcus agalactiae NEM316] Length = 450 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL LE + EC EI+ ++ K+Y+A F + F DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGLES----QGHECLGFCEIDKFARKSYKAIFETEGEVEFHDIRQV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 57 TDQDFRKFRGQVDIICVGFPCQAFSLAG 84 >gi|319745928|gb|EFV98213.1| type II DNA modification methyltransferase [Streptococcus agalactiae ATCC 13813] Length = 454 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL L ++ EC EI+ ++ K+Y+A + + F DI ++ Sbjct: 4 MKFLDLFAGIGGFRLGL----TNQGHECIGFCEIDKFARKSYKAIYETEGEIEFHDIRQV 59 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 60 TDQDFKQLRGQVDIICGGFPCQAFSLAG 87 >gi|111607698|gb|ABH10736.1| DNA methyltransferase [Flavobacterium sp. 4H] Length = 408 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-K 60 K DLF GIGG RL L+ + +C F+SE N + KTY+ NF FGDI K Sbjct: 95 FKFIDLFAGIGGFRLALQ----NVGGKCVFTSEWNNEAQKTYRENFGEVP-FGDITKERN 149 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 IP+ D+L AGFPCQ FS AG Sbjct: 150 KNYIPEKFDILCAGFPCQAFSIAG 173 >gi|159027646|emb|CAO89510.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 728 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF GIGG RL E +C +S EI+ K Y NF + DI KI Sbjct: 6 LRFIDLFAGIGGFRLAFES----VGYDCVYSCEIDENCRKVYFNNF-QEIPDQDIRKIAI 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+PD +VL AGFPCQPFS +G Sbjct: 61 HDLPDFEVLTAGFPCQPFSISG 82 >gi|331643338|ref|ZP_08344469.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli H736] gi|331036809|gb|EGI09033.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) (M.EcoRII) [Escherichia coli H736] Length = 491 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 110 FRFIDLFAGIGGIRKGFEA----IGGQCVFTSEWNKDAVRTYKANWFNDEQVHKFNLDIR 165 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D +PDHDVLLAGFPCQPFS AG Sbjct: 166 EVTLSDKTDVLETDAYAYIDEHVPDHDVLLAGFPCQPFSLAG 207 >gi|218701133|ref|YP_002408762.1| DNA cytosine methylase [Escherichia coli IAI39] gi|218371119|emb|CAR18947.1| Modification methylase EcoRII (M.EcoRII) (Cytosine-specific methyltransferase EcoRII) [Escherichia coli IAI39] Length = 491 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 110 FRFIDLFAGIGGIRKGFEA----IGGQCVFTSEWNKDAVRTYKANWFNDEQVHKFNLDIR 165 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D +PDHDVLLAGFPCQPFS AG Sbjct: 166 EVTLSDKTDVLETDAYAYIDEHVPDHDVLLAGFPCQPFSLAG 207 >gi|260598469|ref|YP_003211040.1| DNA cytosine methylase [Cronobacter turicensis z3032] gi|260217646|emb|CBA31957.1| DNA-cytosine methyltransferase [Cronobacter turicensis z3032] Length = 450 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 67 FRFIDLFAGIGGIRSGFEAA----GGQCVFTSEWNKHAVRTYKANWYCDPQLHQFNEDIR 122 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 + IP HDVLLAGFPCQPFS AG Sbjct: 123 DVTLSHKPEVSDEAAADHIRACIPPHDVLLAGFPCQPFSLAG 164 >gi|53714966|ref|YP_100958.1| C-5 cytosine-specific DNA-methylase [Bacteroides fragilis YCH46] gi|52217831|dbj|BAD50424.1| C-5 cytosine-specific DNA-methylase [Bacteroides fragilis YCH46] Length = 431 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 51/84 (60%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF G+GG RL ++ + +C FSSE N Y+ KTY ANF FGDI K T Sbjct: 113 FTFIDLFAGMGGFRLAMQA----QGGKCVFSSEWNKYAQKTYLANFGEMP-FGDITKEMT 167 Query: 62 QD-IP-DHDVLLAGFPCQPFSQAG 83 + IP + DVL AGFPCQPFS AG Sbjct: 168 KSYIPRNFDVLCAGFPCQPFSIAG 191 >gi|311977229|gb|ADQ20489.1| M.AspCNI [Acinetobacter sp. 1690] Length = 327 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 4/80 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF G GG+ L Q + ++++IN ++ KTY N + ++ GDI +I Sbjct: 4 LTAISLFSGCGGMDLGFVQA----GFDVLWANDINGFACKTYAHNIGDHIVHGDITEIDY 59 Query: 62 QDIPDHDVLLAGFPCQPFSQ 81 Q IP D+++ GFPCQ FS Sbjct: 60 QSIPTADIIIGGFPCQDFSM 79 >gi|161617789|ref|YP_001591754.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161367153|gb|ABX70921.1| hypothetical protein SPAB_05653 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 474 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 96 FRFIDLFAGIGGIRKGFEA----IGGQCVFTSEWNKEAVRTYKANWYNDEDAHTFNLDIR 151 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 ++ Q IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSGEEGISEEKAYAHIDQHIPDHDVLLAGFPCQPFSLAG 193 >gi|127420|sp|P19888|MTBA_BACAR RecName: Full=Modification methylase BanI; Short=M.BanI; AltName: Full=Cytosine-specific methyltransferase BanI gi|216242|dbj|BAA00613.1| BanI modification methylase [Aneurinibacillus aneurinilyticus] Length = 428 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 40/84 (47%), Positives = 50/84 (59%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF GIGGIR+ E+ + EC SSEI+ + +TY NF GDI +I Sbjct: 3 IKFVDLFAGIGGIRIGFERAAKRFELETECVLSSEIDKKACETYALNFKEEPQ-GDIHEI 61 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + P+ D LLAGFPCQPFS AG Sbjct: 62 TS--FPEFDFLLAGFPCQPFSYAG 83 >gi|168234623|ref|ZP_02659681.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736513|ref|YP_002117411.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712015|gb|ACF91236.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291717|gb|EDY31067.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 474 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 96 FRFIDLFAGIGGIRKGFEA----IGGQCVFTSEWNKEAVRTYKANWYNDEDAHTFNLDIR 151 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 ++ Q IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSGEEGISEEKAYAHIDQHIPDHDVLLAGFPCQPFSLAG 193 >gi|261340425|ref|ZP_05968283.1| DNA (cytosine-5-)-methyltransferase [Enterobacter cancerogenus ATCC 35316] gi|288317516|gb|EFC56454.1| DNA (cytosine-5-)-methyltransferase [Enterobacter cancerogenus ATCC 35316] Length = 477 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P+ F DI Sbjct: 92 FRFIDLFAGIGGIRHGFEA----IGGQCVFTSEWNKHAVRTYKANWYCDPDEHHFNADIR 147 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 + IP HDVLLAGFPCQPFS AG Sbjct: 148 DVTLSHKSGVTDEEAAHHIRQAIPAHDVLLAGFPCQPFSLAG 189 >gi|66391578|ref|YP_239103.1| hypothetical protein RB43ORF127c [Enterobacteria phage RB43] gi|62288666|gb|AAX78649.1| hypothetical protein RB43ORF127c [Enterobacteria phage RB43] Length = 302 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 36/82 (43%), Positives = 56/82 (68%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DL G+GG+R+ ++ F+ VEC ++EI+ ++ +TY AN+ + GD+ I Sbjct: 1 MKLIDLCAGVGGVRMGFDRAFD--GVECVLTAEIDKFAQQTYAANWGGDNLEGDLFAIDE 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +PDHD+LLAGFPCQ FS+AG Sbjct: 59 NKVPDHDILLAGFPCQAFSKAG 80 >gi|332523411|ref|ZP_08399663.1| modification methylase HpaII [Streptococcus porcinus str. Jelinkova 176] gi|332314675|gb|EGJ27660.1| modification methylase HpaII [Streptococcus porcinus str. Jelinkova 176] Length = 451 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 +K DLF GIGG RL L + + EC EI+ ++ K+Y+A + + F DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGLTR----QGHECIGFCEIDKFARKSYKAIYKTEGEIEFHDIRQV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 57 TDQDFRQLRGQVDIICGGFPCQAFSLAG 84 >gi|223932228|ref|ZP_03624232.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591] gi|223899209|gb|EEF65566.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591] Length = 451 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL +E + +C EI+ ++ +Y+A F + + DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGMES----QGHKCVGFCEIDKFARTSYKAMFNTEGEIEYHDIKEV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 D D++ GFPCQ FS AG Sbjct: 57 TDHDFRQFRGQVDIICGGFPCQAFSLAG 84 >gi|300931174|ref|ZP_07146520.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 187-1] gi|300461007|gb|EFK24500.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 187-1] Length = 477 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGI E +C F+SE N ++V+TY+AN P T F DI Sbjct: 92 FRFIDLFAGIGGICRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP+HDVLLAGFPCQPFS AG Sbjct: 148 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189 >gi|237713924|ref|ZP_04544405.1| C-5 cytosine-specific DNA-methylase [Bacteroides sp. D1] gi|262409168|ref|ZP_06085712.1| C-5 cytosine-specific DNA-methylase [Bacteroides sp. 2_1_22] gi|229446080|gb|EEO51871.1| C-5 cytosine-specific DNA-methylase [Bacteroides sp. D1] gi|262352915|gb|EEZ02011.1| C-5 cytosine-specific DNA-methylase [Bacteroides sp. 2_1_22] Length = 361 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 41/84 (48%), Positives = 49/84 (58%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK-IK 60 DLF G+GG RL ++ + +C FSSE N Y+ KTY ANF FGDI K + Sbjct: 29 FTFIDLFAGMGGFRLAMQA----QGGKCVFSSEWNKYAQKTYLANFGEMP-FGDITKEVT 83 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 IP D+L AGFPCQPFS AG Sbjct: 84 KSYIPQYFDILCAGFPCQPFSIAG 107 >gi|169786848|ref|YP_001700742.1| modification methylase (cytosine-specific methyltransferase)(HpaIIM-like) [Acinetobacter baumannii SDF] gi|169150765|emb|CAP02959.1| modification methylase (Cytosine-specific methyltransferase)(HpaIIM-like) [Acinetobacter baumannii] Length = 366 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 42/84 (50%), Positives = 50/84 (59%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL + + C FSSEI+ + KTY ANF +T +GDI T Sbjct: 42 FKFIDLFAGIGGFRLAFQ----NLGGRCVFSSEIDLAAQKTYTANFGDTP-YGDITLEST 96 Query: 62 QD-IPD-HDVLLAGFPCQPFSQAG 83 +D IPD D+L GFPCQ FS AG Sbjct: 97 KDAIPDNFDILCGGFPCQAFSIAG 120 >gi|161505003|ref|YP_001572115.1| DNA cytosine methylase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866350|gb|ABX22973.1| hypothetical protein SARI_03133 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 474 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 96 FRFIDLFAGIGGIRKGFEA----IGGQCVFTSEWNKEAVRTYKANWYNDEDAHTFNLDIR 151 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 ++ Q IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSGEEGISEEKAYAHIDQHIPDHDVLLAGFPCQPFSLAG 193 >gi|295110825|emb|CBL24778.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162] Length = 311 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF G GG+ L L Q N E ++++I+ +V TY+ N + ++ DI I Sbjct: 1 MKIISLFSGAGGLDLGLIQAGN----EVIWANDIDKDAVATYRENIGDHIVCDDIKNINI 56 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 D+P+ DV++ GFPCQ FS A Sbjct: 57 YDLPEADVVVGGFPCQGFSLA 77 >gi|291320332|ref|YP_003515594.1| modification methylase Bsp6I [Mycoplasma agalactiae] gi|290752665|emb|CBH40638.1| Modification methylase Bsp6I [Mycoplasma agalactiae] Length = 315 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 3/83 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K+ LF G+GGI L EQT + +++E + ++ TY++NF + DI K+ Sbjct: 1 MYKVGSLFAGVGGIDLGFEQTGK---FKTIWANEFDKNAILTYKSNFSTFVSNEDIRKVD 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +DIP+ D++L+GFPC FS AG Sbjct: 58 VRDIPEVDIILSGFPCTSFSVAG 80 >gi|157147667|ref|YP_001454986.1| DNA cytosine methylase [Citrobacter koseri ATCC BAA-895] gi|157084872|gb|ABV14550.1| hypothetical protein CKO_03470 [Citrobacter koseri ATCC BAA-895] Length = 474 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 96 FRFIDLFAGIGGIRKGFEA----IGGQCVFTSEWNKEAVRTYKANWYNDEDAHTFNLDIR 151 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 ++ Q IPDHDVLLAGFPCQPFS AG Sbjct: 152 EVTLSGEEGISEEKAYAHIDQHIPDHDVLLAGFPCQPFSLAG 193 >gi|294155594|ref|YP_003559978.1| cytosine-specific DNA modification methyltransferase [Mycoplasma crocodyli MP145] gi|291600134|gb|ADE19630.1| cytosine-specific DNA modification methyltransferase [Mycoplasma crocodyli MP145] Length = 388 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 40/82 (48%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG Q ++ EC FSSEI+ Y + TY NF + F DI K+ Sbjct: 6 FKFIDLFSGIGGFH----QAMSYFGGECVFSSEIDKYCINTYFNNFNISSDF-DITKVNV 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +IP HD+L AGFPCQ FS+AG Sbjct: 61 NEIPKHDLLCAGFPCQAFSKAG 82 >gi|319744417|gb|EFV96775.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus agalactiae ATCC 13813] Length = 450 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL L + + EC EI+ ++ K+Y+A + + F DI ++ Sbjct: 4 MKFLDLFAGIGGFRLGLTR----QGHECIGFCEIDKFARKSYKAIYETKGEIEFHDIRQV 59 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 +D D++ GFPCQ FS AG Sbjct: 60 TDEDFRQLRGQVDIICGGFPCQAFSLAG 87 >gi|322411604|gb|EFY02512.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 451 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL L + + EC EI+ ++ K+Y+A + + F DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGLIR----QGHECIGFCEIDKFARKSYKAIYETKGEIEFHDIRQV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 57 TDQDFRQLRGQVDIICGGFPCQAFSLAG 84 >gi|295110826|emb|CBL24779.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162] Length = 312 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L + + + +++++ +V+TY+ N + +I DI+KIK Sbjct: 1 MKVVSLFSGAGGLDLGFKMAGH----DIIWANDMYADAVETYKKNIGDHIICEDISKIKA 56 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 +DIPD D+++ GFPCQ FS A Sbjct: 57 EDIPDCDIIIGGFPCQGFSVA 77 >gi|290891561|ref|ZP_06554618.1| hypothetical protein AWRIB429_2008 [Oenococcus oeni AWRIB429] gi|290478814|gb|EFD87481.1| hypothetical protein AWRIB429_2008 [Oenococcus oeni AWRIB429] Length = 382 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 +K DLF GIGG RL LEQ + EC EI+ ++ ++Y+ N + DI + Sbjct: 1 MKFLDLFAGIGGFRLGLEQAGH----ECVGFCEIDKFARQSYKAIHNTEGEREYHDITTV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 ++ +++ GFPCQ FS AG Sbjct: 57 SNEEWRTLRGTVELICGGFPCQAFSIAG 84 >gi|331677320|ref|ZP_08377999.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H591] gi|331075055|gb|EGI46371.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H591] Length = 415 Score = 124 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 M+K DLF G GGIRL EQ + +C SSEI+ + +TY+ NF + + DI Sbjct: 1 MIKFVDLFSGTGGIRLGFEQAMKEIGLSTKCVKSSEIDKKACETYKLNF-DEESYCDIHD 59 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + + DVLLAGFPCQ FS AG Sbjct: 60 VDIDE--SFDVLLAGFPCQAFSYAG 82 >gi|149369548|ref|ZP_01889400.1| C-5 cytosine-specific DNA-methylase [unidentified eubacterium SCB49] gi|149356975|gb|EDM45530.1| C-5 cytosine-specific DNA-methylase [unidentified eubacterium SCB49] Length = 421 Score = 124 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG R+ L+ + +C F+SE + YS +TY+ANF + FGDI + +T Sbjct: 97 FKFIDLFAGIGGFRMALQ----NLEGKCVFTSEWDKYSKQTYKANFG-EIPFGDITRPQT 151 Query: 62 QD-IPD-HDVLLAGFPCQPFSQAG 83 + IPD DVL AGFPCQ FS AG Sbjct: 152 KSYIPDNFDVLCAGFPCQAFSIAG 175 >gi|24527986|emb|CAD33713.1| putative DNA methylase [Escherichia coli] Length = 310 Score = 124 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L L+Q+ ++ ++++I +V TY+ N ++ GDIA I + Sbjct: 1 MKVVSLFSGAGGLDLGLKQS----GLDIIWANDIYEDAVDTYKRNIGEHIVLGDIANINS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 DIP+ DV++ GFPCQ FS A Sbjct: 57 SDIPNCDVVVGGFPCQGFSVA 77 >gi|322411818|gb|EFY02726.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 451 Score = 124 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL L ++ EC EI+ +++K+Y+A + + F DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGL----TNQGHECIGFCEIDKFAMKSYKAIYETEGEIEFHDIRQV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 57 TDQDFKQLRGQVDIICGGFPCQAFSLAG 84 >gi|167035739|ref|YP_001670970.1| DNA cytosine methylase [Pseudomonas putida GB-1] gi|166862227|gb|ABZ00635.1| DNA-cytosine methyltransferase [Pseudomonas putida GB-1] Length = 447 Score = 124 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGD-IA 57 DLF GIGGIR EQ C F+SE N +V+TY+AN P + D I Sbjct: 76 FDFIDLFAGIGGIRRGFEQ----HGGRCVFTSEWNDQAVRTYKANHYSDPEHHRYNDDIR 131 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 K+ D IPDHDVLLAGFPCQPFS AG Sbjct: 132 KVTLSDNDDVSEQDVIASIHRQIPDHDVLLAGFPCQPFSIAG 173 >gi|295098276|emb|CBK87366.1| DNA-methyltransferase (dcm) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 477 Score = 124 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P+ F DI Sbjct: 92 FRFIDLFAGIGGIRHGFEA----IGGQCVFTSEWNKHAVRTYKANWYCDPDAHQFNADIR 147 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 + IP HDVLLAGFPCQPFS AG Sbjct: 148 DVTLSHKTGVSDEEAAEHIRNTIPAHDVLLAGFPCQPFSLAG 189 >gi|332361316|gb|EGJ39120.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus sanguinis SK1056] Length = 454 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 +K DLF GIGG R+ LE + EC EI+ ++ K+YQA + + DI ++ Sbjct: 4 MKFLDLFAGIGGFRMGLES----QGHECIGYCEIDKFARKSYQAIYDTEGEIELHDIRQV 59 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 60 TDQDFRQLRGQVDIICGGFPCQAFSLAG 87 >gi|289167633|ref|YP_003445902.1| methyl transferase [Streptococcus mitis B6] gi|288907200|emb|CBJ22035.1| methyl transferase [Streptococcus mitis B6] Length = 452 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ DLF GIGG RL +E + EC EI+ ++ K+Y++ F + F DI + Sbjct: 1 MRFIDLFSGIGGFRLGMESVGH----ECIGFCEIDKFARKSYKSIFQTEGEIEFHDIRDV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 + DV+ GFPCQ FS AG Sbjct: 57 SDDEFKKLRGKVDVICGGFPCQAFSIAG 84 >gi|310767946|gb|ADP12896.1| DNA cytosine methylase [Erwinia sp. Ejp617] Length = 467 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ DI Sbjct: 93 FRFIDLFAGIGGIRSGFEA----IGGQCVFTSEWNKHAVRTYKANWYCDERQHRFNQDIR 148 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 + Q +PDHDVLLAGFPCQPFS AG Sbjct: 149 DVTLSGKPEITDRQAYQHIQQQVPDHDVLLAGFPCQPFSLAG 190 >gi|292488627|ref|YP_003531511.1| DNA cytosine methylase [Erwinia amylovora CFBP1430] gi|292899788|ref|YP_003539157.1| modification methylase EcoRII [Erwinia amylovora ATCC 49946] gi|291199636|emb|CBJ46755.1| modification methylase EcoRII [Erwinia amylovora ATCC 49946] gi|291554058|emb|CBA21160.1| DNA cytosine methylase [Erwinia amylovora CFBP1430] gi|312172770|emb|CBX81026.1| DNA cytosine methylase [Erwinia amylovora ATCC BAA-2158] Length = 469 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ DI Sbjct: 95 FRFIDLFAGIGGIRSGFEA----IGGQCVFTSEWNKHAVRTYKANWYCDERQHRFNQDIR 150 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 + Q +PDHDVLLAGFPCQPFS AG Sbjct: 151 DVTLSGKPEISDRQAYQHIQQQVPDHDVLLAGFPCQPFSLAG 192 >gi|2760954|gb|AAB95336.1| EaeI methyltransferase alpha subunit [Enterobacter aerogenes] Length = 309 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K++ F GIGG L LE+ +E F EIN + K + N+PN + DI ++ Sbjct: 9 YKVSSFFAGIGGFDLGLEKA----GMEVVFQCEINKFCQKVLRKNWPNVPLHTDITQLNA 64 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 +IP+ V GFPCQ S A Sbjct: 65 DEIPESSVWCGGFPCQDVSSA 85 >gi|161502886|ref|YP_001569998.1| DNA cytosine methylase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864233|gb|ABX20856.1| hypothetical protein SARI_00944 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 476 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLEHRFNEDIR 146 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 I IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVGDDEAAEHIRQYIPQHDVLLAGFPCQPFSLAG 188 >gi|126698504|ref|YP_001087401.1| putative DNA methylase [Clostridium difficile 630] gi|115249941|emb|CAJ67761.1| putative phage DNA modification methylase [Clostridium difficile] Length = 357 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIA 57 ML DLF GIGG RL +E+ + +C E + ++ +Y A + DI Sbjct: 1 MLTFLDLFAGIGGFRLGMEKAGH----KCLGHCEYDKFANLSYNAMHKPKEDEWFERDIR 56 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 +I+T++IP DV GFPCQ S AG Sbjct: 57 EIRTENIPRADVWCFGFPCQDISVAG 82 >gi|121997219|ref|YP_001002006.1| DNA-cytosine methyltransferase [Halorhodospira halophila SL1] gi|121588624|gb|ABM61204.1| DNA-cytosine methyltransferase [Halorhodospira halophila SL1] Length = 436 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 52/97 (53%), Gaps = 19/97 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 DLF G+GGIR E H C FSSE + ++++TY+ANF N I DI +I Sbjct: 70 FSFIDLFAGVGGIRQGFESVGGH----CVFSSEWDRFALQTYRANFGNEGEEIQTDIRQI 125 Query: 60 KT-------------QDIPDHDVLLAGFPCQPFSQAG 83 + IP HDVLLAGFPCQPFS AG Sbjct: 126 TAVSDDADENSRSIDERIPQHDVLLAGFPCQPFSLAG 162 >gi|150400370|ref|YP_001324137.1| DNA-cytosine methyltransferase [Methanococcus vannielii SB] gi|150013073|gb|ABR55525.1| DNA-cytosine methyltransferase [Methanococcus vannielii SB] Length = 368 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFN-------HRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 K+ LF G GG+ L + F H E FS++I+ + +TY++NF ++ + Sbjct: 35 FKVISLFSGCGGMDLGFKGGFEIFKQHYEHNPYEIIFSNDISDKACRTYESNFCHSSVCA 94 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI IK +DIP+ D+++ GFPCQ FS AG Sbjct: 95 DIKDIKNEDIPNADIVIGGFPCQDFSHAG 123 >gi|198242597|ref|YP_002215094.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937113|gb|ACH74446.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326622842|gb|EGE29187.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 476 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|200390041|ref|ZP_03216652.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602486|gb|EDZ01032.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 476 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|300717257|ref|YP_003742060.1| cytosine-specific methyltransferase [Erwinia billingiae Eb661] gi|299063093|emb|CAX60213.1| Cytosine-specific methyltransferase [Erwinia billingiae Eb661] Length = 466 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N YSV+TY+AN+ P+ F DI Sbjct: 93 FRFIDLFAGIGGIRSGFEA----IGGQCVFTSEWNKYSVRTYKANWYCDPDAHRFNQDIR 148 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 + + +PDHDVLLAGFPCQPFS AG Sbjct: 149 DVTLSGNPAVSEQQAYQHIDKQVPDHDVLLAGFPCQPFSLAG 190 >gi|220929948|ref|YP_002506857.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] gi|220000276|gb|ACL76877.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] Length = 338 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF G+GG R+ LE +C +S+E + K Y NF + + GDI +I Sbjct: 12 FKFIDLFAGLGGFRIALES----LGAKCVYSNEWDKPVRKVYTDNFGD-IPEGDITQINE 66 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP+HD+L AGFPCQ FS +G Sbjct: 67 NSIPEHDILCAGFPCQAFSISG 88 >gi|313667088|gb|ADR72987.1| M2.BsmFI [Geobacillus stearothermophilus] Length = 365 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + LF G GG+ L + ++ +I+ +V TY+ N + +I GDI KI+ + Sbjct: 4 TVVSLFSGGGGLDLGF----KNSGFNIIWAIDIDKDAVSTYKENLGDHIILGDITKIQEK 59 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIP DV++ G PCQ FS G Sbjct: 60 DIPKADVVIGGPPCQSFSLVG 80 >gi|168259722|ref|ZP_02681695.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205351069|gb|EDZ37700.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 476 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|319744643|gb|EFV96990.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus agalactiae ATCC 13813] Length = 451 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL LE + +C EI+ ++ +Y+A F + + DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGLES----QGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 D D++ GFPCQ FS AG Sbjct: 57 TDHDFRQFRGQVDIICGGFPCQAFSLAG 84 >gi|16765328|ref|NP_460943.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167993566|ref|ZP_02574660.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16420526|gb|AAL20902.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205328427|gb|EDZ15191.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261247157|emb|CBG24980.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993981|gb|ACY88866.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158505|emb|CBW18015.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912981|dbj|BAJ36955.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224636|gb|EFX49699.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130270|gb|ADX17700.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988880|gb|AEF07863.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 476 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|161613440|ref|YP_001587405.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|205352316|ref|YP_002226117.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856496|ref|YP_002243147.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|161362804|gb|ABX66572.1| hypothetical protein SPAB_01156 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|205272097|emb|CAR36949.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206708299|emb|CAR32602.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326627365|gb|EGE33708.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 476 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|168462467|ref|ZP_02696398.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194443436|ref|YP_002041256.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|238912436|ref|ZP_04656273.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194402099|gb|ACF62321.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195634356|gb|EDX52708.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 476 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|167552776|ref|ZP_02346527.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322616|gb|EDZ10455.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 476 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|168239231|ref|ZP_02664289.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734985|ref|YP_002115026.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|204931362|ref|ZP_03222061.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|194710487|gb|ACF89708.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288080|gb|EDY27467.1| modification methylase EcoRII (Cytosine-specificmethyltransferase EcoRII) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204319845|gb|EDZ05054.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 476 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|168234164|ref|ZP_02659222.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168821682|ref|ZP_02833682.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194470868|ref|ZP_03076852.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197263635|ref|ZP_03163709.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|194457232|gb|EDX46071.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197241890|gb|EDY24510.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205331847|gb|EDZ18611.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205341769|gb|EDZ28533.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320085391|emb|CBY95172.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 476 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|56413096|ref|YP_150171.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362022|ref|YP_002141659.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127353|gb|AAV76859.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093499|emb|CAR58960.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 476 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|225856779|ref|YP_002738290.1| methyl transferase [Streptococcus pneumoniae P1031] gi|225724445|gb|ACO20297.1| methyl transferase [Streptococcus pneumoniae P1031] Length = 452 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ DLF GIGG RL +E + EC EI+ ++ K+Y++ F + F DI + Sbjct: 1 MRFIDLFSGIGGFRLGMESVGH----ECIGFCEIDKFARKSYKSIFQTEGEIEFHDIRDV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 + D++ GFPCQ FS AG Sbjct: 57 SDAEFKKLRGKVDIICGGFPCQAFSIAG 84 >gi|146318633|ref|YP_001198345.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 05ZYH33] gi|146320840|ref|YP_001200551.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 98HAH33] gi|253751755|ref|YP_003024896.1| C-5 cytosine-specific DNA methylase [Streptococcus suis SC84] gi|253755540|ref|YP_003028680.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407] gi|145689439|gb|ABP89945.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 05ZYH33] gi|145691646|gb|ABP92151.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 98HAH33] gi|251816044|emb|CAZ51664.1| C-5 cytosine-specific DNA methylase [Streptococcus suis SC84] gi|251818004|emb|CAZ55786.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407] Length = 451 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL +E + +C EI+ ++ +Y+A F + + DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGMES----QGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 D D++ GFPCQ FS AG Sbjct: 57 TDHDFRQFRGQVDIICGGFPCQAFSLAG 84 >gi|322616984|gb|EFY13892.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618223|gb|EFY15115.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625894|gb|EFY22713.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626346|gb|EFY23156.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632761|gb|EFY29506.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639103|gb|EFY35796.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640419|gb|EFY37075.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647220|gb|EFY43719.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648528|gb|EFY44979.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655540|gb|EFY51848.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660318|gb|EFY56556.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662999|gb|EFY59206.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668184|gb|EFY64343.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674057|gb|EFY70151.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675591|gb|EFY71665.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682998|gb|EFY79014.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686692|gb|EFY82670.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195420|gb|EFZ80600.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198052|gb|EFZ83169.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204476|gb|EFZ89482.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207566|gb|EFZ92514.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210995|gb|EFZ95855.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217551|gb|EGA02270.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323226697|gb|EGA10894.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231573|gb|EGA15686.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236016|gb|EGA20095.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240586|gb|EGA24629.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245478|gb|EGA29478.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247596|gb|EGA31547.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254424|gb|EGA38240.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257764|gb|EGA41444.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262129|gb|EGA45692.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266252|gb|EGA49742.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270729|gb|EGA54168.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 476 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|322376648|ref|ZP_08051141.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus sp. M334] gi|321282455|gb|EFX59462.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus sp. M334] Length = 452 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ DLF GIGG RL +E + EC EI+ ++ K+Y++ F + F DI + Sbjct: 1 MRFIDLFSGIGGFRLGMESVGH----ECIGFCEIDKFARKSYKSIFQTEGEIEFHDIRDV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 + DV+ GFPCQ FS AG Sbjct: 57 SDDEFKKLRGKVDVVCGGFPCQAFSIAG 84 >gi|218439646|ref|YP_002377975.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] gi|218172374|gb|ACK71107.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] Length = 320 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 3/84 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLFCGIGG RL + Q N + C FSS+I+ + Y+ NF + L GDI KI Sbjct: 13 IKYVDLFCGIGGFRLAVNQVSEGYNFKSICVFSSDIDGDAQTVYRENFGD-LPEGDITKI 71 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + IP H +LLAGFPCQPFS G Sbjct: 72 PAEMIPHHHLLLAGFPCQPFSICG 95 >gi|312386601|emb|CBY05924.1| putative DNA methylase [Streptococcus pneumoniae] Length = 452 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ DLF GIGG RL +E + EC EI+ ++ ++Y++ F + F DI + Sbjct: 1 MRFIDLFSGIGGFRLGMESVGH----ECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 + DV+ GFPCQ FS AG Sbjct: 57 SDDEFKKLRGKVDVICGGFPCQAFSIAG 84 >gi|169832810|ref|YP_001694558.1| methyl transferase [Streptococcus pneumoniae Hungary19A-6] gi|168995312|gb|ACA35924.1| methyl transferase [Streptococcus pneumoniae Hungary19A-6] Length = 452 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ DLF GIGG RL +E + EC EI+ ++ ++Y++ F + F DI + Sbjct: 1 MRFIDLFSGIGGFRLGMESVGH----ECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 + DV+ GFPCQ FS AG Sbjct: 57 SDDEFKKLRGKVDVICGGFPCQAFSIAG 84 >gi|197251440|ref|YP_002146032.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197215143|gb|ACH52540.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 476 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|16760934|ref|NP_456551.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141374|ref|NP_804716.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213424982|ref|ZP_03357732.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|289829483|ref|ZP_06547095.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25286126|pir||AH0754 site-specific DNA-methyltransferase (cytosine-specific) (EC 2.1.1.73) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503231|emb|CAD05739.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137001|gb|AAO68565.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 476 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|78778033|ref|YP_394348.1| DNA (cytosine-5-)-methyltransferase., Type II site-specific deoxyribonuclease [Sulfurimonas denitrificans DSM 1251] gi|78498573|gb|ABB45113.1| DNA (cytosine-5-)-methyltransferase., Type II site-specific deoxyribonuclease [Sulfurimonas denitrificans DSM 1251] Length = 657 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 42/90 (46%), Positives = 50/90 (55%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--------NTLIF 53 DLF GIGG Q + EC F+SEI+ Y+ KTY+ NF N L Sbjct: 6 FTFIDLFAGIGGFH----QAMHELGGECVFASEIDIYARKTYKYNFKKYSPELFENGLFN 61 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI I ++IPD D+L AGFPCQPFSQAG Sbjct: 62 EDIKTIMPEEIPDFDLLCAGFPCQPFSQAG 91 >gi|188533556|ref|YP_001907353.1| DNA cytosine methylase [Erwinia tasmaniensis Et1/99] gi|188028598|emb|CAO96460.1| DNA-cytosine methyltransferase [Erwinia tasmaniensis Et1/99] Length = 469 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57 + DLF GIGGIR E +C F+SE N +SV+TY+AN+ DI Sbjct: 95 FRFIDLFAGIGGIRSGFEA----IGGQCVFTSEWNKHSVRTYKANWYCDETQHRFNQDIR 150 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 + Q IPDHDVLLAGFPCQPFS AG Sbjct: 151 DVTLSGDPQVDDREAYQHIQQQIPDHDVLLAGFPCQPFSLAG 192 >gi|154149305|ref|YP_001405677.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Campylobacter hominis ATCC BAA-381] gi|153805314|gb|ABS52321.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Campylobacter hominis ATCC BAA-381] Length = 88 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 2/84 (2%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 M K DLF GIGGIRL +Q F +++ F SE++ +V+TY+ANF +++ + GDI K+ Sbjct: 1 MYKSIDLFAGIGGIRLGFDQAFGD-DIKTVFISELDEKAVETYKANFNDSIDVVGDITKV 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + IP+HD+LLAGFPCQ FS AG Sbjct: 60 DEKKIPEHDILLAGFPCQAFSLAG 83 >gi|332075476|gb|EGI85945.1| modification methylase HpaII [Streptococcus pneumoniae GA41301] Length = 452 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ DLF GIGG RL +E + EC EI+ ++ ++Y++ F + F DI + Sbjct: 1 MRFIDLFSGIGGFRLGMESVGH----ECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 + + DV+ GFPCQ FS AG Sbjct: 57 SDDEFKKLRGEVDVICGGFPCQAFSIAG 84 >gi|296103580|ref|YP_003613726.1| DNA cytosine methylase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058039|gb|ADF62777.1| DNA cytosine methylase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 471 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 54/102 (52%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P+ F DI Sbjct: 86 FRFIDLFAGIGGIRHGFEA----IGGQCVFTSEWNKHAVRTYKANWYCDPDAHQFNADIR 141 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 + Q+IP HDVLLAGFPCQPFS AG Sbjct: 142 DVTLSHKSGVSDEEAAEHIRQNIPAHDVLLAGFPCQPFSLAG 183 >gi|307152213|ref|YP_003887597.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306982441|gb|ADN14322.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 317 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 40/84 (47%), Positives = 50/84 (59%), Gaps = 3/84 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ++ DLFCGIGG R+ Q N++ C FSS+I+P + + Y F GDI KI Sbjct: 13 IRYIDLFCGIGGFRIAASQVCLEYNIKPQCVFSSDIDPDAQQVYSKYFGEKP-AGDITKI 71 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 IPDH +LLAGFPCQPFS G Sbjct: 72 PADSIPDHHLLLAGFPCQPFSICG 95 >gi|255591450|ref|XP_002535514.1| cytosine-specific methyltransferase, putative [Ricinus communis] gi|223522828|gb|EEF26867.1| cytosine-specific methyltransferase, putative [Ricinus communis] Length = 206 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 8/85 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAK 58 +I DLF GIGGIR+ E +C F+SE N +S KTYQ NF + + GDI Sbjct: 29 RIIDLFAGIGGIRMGFEA----HGGQCVFTSEWNDFSQKTYQENFRDGTAQHALIGDIVT 84 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + +P+HD+LL GFPCQPFS AG Sbjct: 85 FPAEAVPEHDILLGGFPCQPFSIAG 109 >gi|146312197|ref|YP_001177271.1| DNA cytosine methylase [Enterobacter sp. 638] gi|145319073|gb|ABP61220.1| DNA-cytosine methyltransferase [Enterobacter sp. 638] Length = 471 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P+T F DI Sbjct: 86 FRFVDLFAGIGGIRHGFEA----IGGQCVFTSEWNKHAVRTYKANWYCDPHTHQFNEDIR 141 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 + IP HDVLLAGFPCQPFS AG Sbjct: 142 DVTLSHKSGVTDAEAADHIRRTIPAHDVLLAGFPCQPFSLAG 183 >gi|224583511|ref|YP_002637309.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468038|gb|ACN45868.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 476 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|168244842|ref|ZP_02669774.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194449372|ref|YP_002046042.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194407676|gb|ACF67895.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205336375|gb|EDZ23139.1| modification methylase EcoRII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 476 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|9622224|gb|AAF89681.1| cytosine-specific methyltransferase [Bacillus sp. LU11] Length = 365 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + LF G GG+ L + ++ +I+ +V TY+ N + +I GDI KI+ + Sbjct: 4 TVVSLFSGGGGLDLGF----KNSGFNIIWAIDIDKDAVLTYKENLGDHIILGDITKIQEK 59 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIP+ DV++ G PCQ FS G Sbjct: 60 DIPEADVVIGGPPCQSFSLVG 80 >gi|256545597|ref|ZP_05472956.1| modification methylase HaeIII (cytosine-specificmethyltransferase HaeIII) [Anaerococcus vaginalis ATCC 51170] gi|256398722|gb|EEU12340.1| modification methylase HaeIII (cytosine-specificmethyltransferase HaeIII) [Anaerococcus vaginalis ATCC 51170] Length = 340 Score = 123 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L ++ E ++E + +TY+ N LI GDI KI + Sbjct: 1 MKLISLFSGAGGLDLGFQKA----GYEIVAANEFDKTIWETYEKNHEAKLIKGDIFKIPS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + P+ D ++ G PCQ +S+AG Sbjct: 57 DEFPECDGIIGGPPCQSWSEAG 78 >gi|322385307|ref|ZP_08058952.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus cristatus ATCC 51100] gi|321270566|gb|EFX53481.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus cristatus ATCC 51100] Length = 480 Score = 123 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ DLF GIGG RL +E + EC EI+ ++ ++Y++ F + F DI + Sbjct: 29 MRFIDLFSGIGGFRLGMESVGH----ECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 84 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 + DV+ GFPCQ FS AG Sbjct: 85 SDDEFKKLRGKVDVICGGFPCQAFSIAG 112 >gi|183217290|gb|ACC59209.1| methyltransferase [Streptococcus pneumoniae] gi|321156848|emb|CBW38835.1| putative DNA methylase [Streptococcus pneumoniae] Length = 452 Score = 123 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ DLF GIGG RL +E + EC EI+ ++ ++Y++ F + F DI + Sbjct: 1 MRFIDLFSGIGGFRLGMESVGH----ECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 + DV+ GFPCQ FS AG Sbjct: 57 SDDEFKKLRGKVDVICGGFPCQAFSIAG 84 >gi|268611036|ref|ZP_06144763.1| prophage LambdaSa2, type II DNA modification methyltransferase, putative [Ruminococcus flavefaciens FD-1] Length = 425 Score = 123 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAK 58 M++ D+F GIGG R LE+ EC EI+ ++ + Y+A + + + D K Sbjct: 1 MIRYLDMFAGIGGFRSGLERVG---GFECVGYCEIDKFAKQAYEALYDTSKEVYYDDATK 57 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I +D+PD D++ GFPCQ FS AG Sbjct: 58 IVPEDLPDIDLICGGFPCQSFSIAG 82 >gi|157419765|gb|ABV55454.1| DNA methylase [Streptococcus dysgalactiae subsp. equisimilis] Length = 451 Score = 123 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL +E + +C EI+ ++ +Y+A F + + DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGMES----QGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 D D++ GFPCQ FS AG Sbjct: 57 TDHDFRQFRGQVDIICGGFPCQAFSLAG 84 >gi|22537444|ref|NP_688295.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae 2603V/R] gi|76797962|ref|ZP_00780222.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae 18RS21] gi|77406085|ref|ZP_00783160.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae H36B] gi|313890485|ref|ZP_07824113.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus SPIN 20026] gi|22534321|gb|AAN00168.1|AE014251_12 C-5 cytosine-specific DNA methylase [Streptococcus agalactiae 2603V/R] gi|76586686|gb|EAO63184.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae 18RS21] gi|77175318|gb|EAO78112.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae H36B] gi|313121002|gb|EFR44113.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus SPIN 20026] gi|323127117|gb|ADX24414.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 451 Score = 123 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL +E + +C EI+ ++ +Y+A F + + DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGMES----QGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 D D++ GFPCQ FS AG Sbjct: 57 TDHDFRQFRGQVDIICGGFPCQAFSLAG 84 >gi|290508755|ref|ZP_06548126.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. 1_1_55] gi|289778149|gb|EFD86146.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. 1_1_55] Length = 477 Score = 123 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 92 FRFVDLFAGIGGIRNGFEA----IGGQCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 147 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 + + IP HDVLLAGFPCQPFS AG Sbjct: 148 DVTLSHRPDVSDEEAAQHIRETIPQHDVLLAGFPCQPFSLAG 189 >gi|288934555|ref|YP_003438614.1| DNA-cytosine methyltransferase [Klebsiella variicola At-22] gi|288889264|gb|ADC57582.1| DNA-cytosine methyltransferase [Klebsiella variicola At-22] Length = 466 Score = 123 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 81 FRFVDLFAGIGGIRNGFEA----IGGQCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 136 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 + + IP HDVLLAGFPCQPFS AG Sbjct: 137 DVTLSHRPDVSDEEAAQHIRETIPQHDVLLAGFPCQPFSLAG 178 >gi|206577074|ref|YP_002237693.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae 342] gi|206566132|gb|ACI07908.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae 342] Length = 477 Score = 123 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 92 FRFVDLFAGIGGIRNGFEA----IGGQCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 147 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 + + IP HDVLLAGFPCQPFS AG Sbjct: 148 DVTLSHRPDVSDEEAAQHIRETIPQHDVLLAGFPCQPFSLAG 189 >gi|225869346|ref|YP_002745294.1| C-5 cytosine-specific DNA methylase [Streptococcus equi subsp. zooepidemicus] gi|225702622|emb|CAX00673.1| C-5 cytosine-specific DNA methylase [Streptococcus equi subsp. zooepidemicus] Length = 451 Score = 123 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL L + + +C EI+ ++ K+Y+A + + F DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGLTR----QGHKCIGFCEIDKFARKSYKAIYETKGEIEFHDIRQV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 57 TDQDFRQLRGQMDIICGGFPCQAFSLAG 84 >gi|332361999|gb|EGJ39801.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus sanguinis SK49] Length = 480 Score = 123 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ ++Y++ F + F DI + Sbjct: 29 MKFIDLFSGIGGFRLGMESVGH----ECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 84 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 + D++ GFPCQ FS AG Sbjct: 85 SDDEFKKLRGKVDIICGGFPCQAFSIAG 112 >gi|283785730|ref|YP_003365595.1| DNA-cytosine methyltransferase [Citrobacter rodentium ICC168] gi|282949184|emb|CBG88792.1| DNA-cytosine methyltransferase [Citrobacter rodentium ICC168] Length = 477 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P + F DI Sbjct: 92 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYYCDPASHRFNEDIR 147 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q +P HDVLLAGFPCQPFS AG Sbjct: 148 DITLSHREGISDRQAAEHIRQHVPQHDVLLAGFPCQPFSLAG 189 >gi|4063721|gb|AAC98421.1| methyl transferase [Streptococcus pneumoniae] Length = 452 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ DLF GIGG RL +E + EC EI+ ++ ++Y++ F + F DI + Sbjct: 1 MRFIDLFSGIGGFRLGMESVGH----ECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 + DV+ GFPCQ FS AG Sbjct: 57 SDDEFKKLRGKVDVICGGFPCQAFSIAG 84 >gi|62180565|ref|YP_216982.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128198|gb|AAX65901.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715041|gb|EFZ06612.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 476 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|253755079|ref|YP_003028219.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407] gi|251817543|emb|CAZ55290.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407] Length = 451 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL +E + +C EI+ ++ +Y+A F + + DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGMES----QGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 D D++ GFPCQ FS AG Sbjct: 57 TDHDFRQFRGQVDIICGGFPCQAFSLAG 84 >gi|67458530|ref|YP_246154.1| site-specific DNA methylase [Rickettsia felis URRWXCal2] gi|67004063|gb|AAY60989.1| Site-specific DNA methylase [Rickettsia felis URRWXCal2] Length = 105 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K DLFCGIGG R LE + +EC FSS+I+ + Y+ NF + +GDI +I Sbjct: 1 MYKFIDLFCGIGGFRKALEA----KGLECVFSSDIDKDVQEAYKRNFGDKP-YGDITEIS 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IP HD+L AGFPCQ FS +G Sbjct: 56 ENKIPKHDILCAGFPCQSFSISG 78 >gi|312874669|ref|ZP_07734692.1| modification methylase HaeIII [Lactobacillus iners LEAF 2053A-b] gi|311089796|gb|EFQ48217.1| modification methylase HaeIII [Lactobacillus iners LEAF 2053A-b] Length = 331 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L ++ E ++E + KTY+ N LI GDI KI + Sbjct: 1 MKLISLFSGAGGLDLGFKKA----GYEIVAANEFDKTIWKTYEKNHATRLIKGDICKIPS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + P+ D ++ G PCQ +S+AG Sbjct: 57 DEFPECDGIIGGPPCQSWSEAG 78 >gi|284050345|ref|ZP_06380555.1| DNA (cytosine-5-)-methyltransferase [Arthrospira platensis str. Paraca] Length = 429 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 K DLF GIGG+RL EQ + +C SSEI+ + + YQANF T GDI I Sbjct: 5 KFIDLFAGIGGLRLGFEQAVDSFGCIPDCLLSSEIDRDARQVYQANFSETPQ-GDIKTIS 63 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + +P H +LLAGFPCQ FS AG Sbjct: 64 S--LPPHHILLAGFPCQSFSYAG 84 >gi|291569071|dbj|BAI91343.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39] Length = 429 Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 K DLF GIGG+RL EQ + +C SSEI+ + + YQANF T GDI I Sbjct: 5 KFIDLFAGIGGLRLGFEQAVDSFGCIPDCLLSSEIDRDARQVYQANFSETPQ-GDIKTIS 63 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + +P H +LLAGFPCQ FS AG Sbjct: 64 S--LPPHHILLAGFPCQSFSYAG 84 >gi|321156918|emb|CBW38908.1| putative DNA methylase [Streptococcus pneumoniae] Length = 452 Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ DLF GIGG RL +E + EC EI+ ++ ++Y++ F + F DI + Sbjct: 1 MRFIDLFSGIGGFRLGMESVGH----ECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 + D++ GFPCQ FS AG Sbjct: 57 SDDEFKKLRGKVDIICGGFPCQAFSIAG 84 >gi|323222462|gb|EGA06833.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] Length = 203 Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|194396841|ref|YP_002037999.1| Tn5253 C-5 cytosine-specific DNA methylase [Streptococcus pneumoniae G54] gi|194356508|gb|ACF54956.1| Tn5253 C-5 cytosine-specific DNA methylase [Streptococcus pneumoniae G54] Length = 452 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ DLF GIGG RL +E + EC EI+ ++ ++Y++ F + F DI + Sbjct: 1 MRFIDLFSGIGGFRLGMESVGH----ECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 + D++ GFPCQ FS AG Sbjct: 57 SDDEFKKLRGKVDIICGGFPCQAFSIAG 84 >gi|288906872|emb|CBJ21706.1| type II DNA modification methyltransferase [Streptococcus mitis B6] Length = 380 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 +K DLF GIGG RL +E + +C EI+ ++ ++Y+ N + DI + Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----KCIGFCEIDKFARESYKAIHNTKGEIELHDITAV 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I D++ GFPCQ FS AG Sbjct: 57 SDESIRGIGSVDIICGGFPCQAFSIAG 83 >gi|209901299|ref|YP_002290938.1| putative DNA methylase [Clostridium phage phiCD27] gi|199612180|gb|ACH91353.1| putative DNA methylase [Clostridium phage phiCD27] Length = 276 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIA 57 ML DLF GIGG RL +E+ + +C E + ++ +Y A + DI Sbjct: 1 MLTFLDLFAGIGGFRLGMEKAGH----KCLGHCEYDKFANLSYNAMHKPKEDEWFERDIR 56 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 +I+T++IP DV GFPCQ S AG Sbjct: 57 EIRTENIPRADVWCFGFPCQDISVAG 82 >gi|311064356|ref|YP_003971081.1| cytosine methyl transferase Dcm [Bifidobacterium bifidum PRL2010] gi|310866675|gb|ADP36044.1| Dcm Cytosine methyl transferase [Bifidobacterium bifidum PRL2010] Length = 326 Score = 122 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 4/80 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ LF G GG+ L + + ++++ + +V+TY+AN + + DI+++ Sbjct: 14 RVVSLFSGAGGLDLGFKLA----GFQLAWANDFDKDAVETYRANIDDHCVCADISEVSDH 69 Query: 63 DIPDHDVLLAGFPCQPFSQA 82 DIPD D+++ GFPCQ FS A Sbjct: 70 DIPDCDIMIGGFPCQGFSMA 89 >gi|213650730|ref|ZP_03380783.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 405 Score = 122 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 20 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 75 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 76 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 117 >gi|313678561|ref|YP_004056301.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis PG45] gi|312950401|gb|ADR24996.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis PG45] Length = 315 Score = 122 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 3/83 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K+ LF G+GGI L EQT + +++E + ++ TY++NF + DI K+ Sbjct: 1 MYKVGSLFAGVGGIDLGFEQTGK---FKTIWANEFDKNALLTYKSNFSTFVSNVDIRKVN 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD D++L+GFPC FS AG Sbjct: 58 VNDIPDVDIILSGFPCTSFSIAG 80 >gi|182684309|ref|YP_001836056.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae CGSP14] gi|221232093|ref|YP_002511246.1| DNA methylase [Streptococcus pneumoniae ATCC 700669] gi|182629643|gb|ACB90591.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae CGSP14] gi|220674554|emb|CAR69117.1| putative DNA methylase [Streptococcus pneumoniae ATCC 700669] Length = 452 Score = 122 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ DLF GIGG RL +E + EC EI+ ++ ++Y++ F + F DI + Sbjct: 1 MRFIDLFSGIGGFRLGMESVGH----ECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 + D++ GFPCQ FS AG Sbjct: 57 SDDEFKKLRGKVDIICGGFPCQAFSIAG 84 >gi|48093754|gb|AAT40239.1| Eco128I DNA methylase [Escherichia coli] Length = 332 Score = 122 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI Sbjct: 15 FRFIDLFAGIGGIRKGFE----TIGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 70 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 ++ D +PDHDVLLAGFPCQPFS AG Sbjct: 71 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 112 >gi|304373674|ref|YP_003858419.1| putative DNA-methyltransferase, type II restriction-modification system [Enterobacteria phage RB16] gi|299829630|gb|ADJ55423.1| putative DNA-methyltransferase, type II restriction-modification system [Enterobacteria phage RB16] Length = 302 Score = 122 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI DL G+GG+R + F VEC +SEI+ ++ +TY N+ + + GD+ I Sbjct: 1 MKIIDLCAGVGGVRFGFDNAFG--GVECLLTSEIDKHAQQTYIENWGDDNLQGDLFAIDE 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +PDHD+LLAGFPCQ FS+AG Sbjct: 59 NKVPDHDILLAGFPCQAFSKAG 80 >gi|256819660|ref|YP_003140939.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271] gi|256581243|gb|ACU92378.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271] Length = 318 Score = 122 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 7/83 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF G+GG R L+ + EC FSSE + ++ +TY+ N+ FGDI +T+ Sbjct: 6 KFIDLFAGVGGFRYALQ----NIGAECVFSSEWDKFAQQTYKLNYGEVP-FGDITLQETK 60 Query: 63 D-IP-DHDVLLAGFPCQPFSQAG 83 D IP + D+L AGFPCQ FS AG Sbjct: 61 DNIPNEFDILCAGFPCQAFSIAG 83 >gi|119488852|ref|ZP_01621814.1| NgoIM [Lyngbya sp. PCC 8106] gi|119455013|gb|EAW36155.1| NgoIM [Lyngbya sp. PCC 8106] Length = 385 Score = 122 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 +K +LF GIGG RL ++ N+E ++++ + S + Y++NF N+++ DI +I Sbjct: 1 MKAIELFAGIGGFRLGMKGA----NIETVWANDSSELSCRVYESNFGQNSIVLADITQID 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIP HD L AGFPCQPFS AG Sbjct: 57 LSDIPHHDFLTAGFPCQPFSPAG 79 >gi|308185227|ref|YP_003929360.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SJM180] gi|308061147|gb|ADO03043.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SJM180] Length = 317 Score = 122 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF GIGG+ L Q E ++++ + ++V+TY+AN +I GDI +I+ Sbjct: 1 MKIASLFSGIGGLDLGFIQ----NGFEIVWANDFDKHAVETYKANIGQNIILGDI-EIEK 55 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 I HD+L+ GFPCQPFS G Sbjct: 56 DHICGHDILIGGFPCQPFSTLG 77 >gi|303328045|ref|ZP_07358484.1| modification methylase MspI [Desulfovibrio sp. 3_1_syn3] gi|302861871|gb|EFL84806.1| modification methylase MspI [Desulfovibrio sp. 3_1_syn3] Length = 417 Score = 122 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 37/83 (44%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M DLF G+GG L L + +C F+SEI+ Y+ NF + GDI K+ Sbjct: 6 MKTFIDLFAGLGGFHLGLSRA----GYQCVFASEIDGDLASLYERNFGLRPV-GDIRKVD 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +P HDVL AGFPCQPFS AG Sbjct: 61 VNHVPKHDVLCAGFPCQPFSSAG 83 >gi|257081612|ref|ZP_05575973.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis E1Sol] gi|256989642|gb|EEU76944.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis E1Sol] Length = 398 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A T + DI I Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----ECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I DV+ GFPCQ FS AG Sbjct: 57 SDEFIRRIGSVDVICGGFPCQAFSIAG 83 >gi|292670064|ref|ZP_06603490.1| modification methylase EcoRII [Selenomonas noxia ATCC 43541] gi|292648252|gb|EFF66224.1| modification methylase EcoRII [Selenomonas noxia ATCC 43541] Length = 377 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 2/83 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 + DLF GIGGIR + F + F SE + ++ KTY+AN+ ++ I GDI KI Sbjct: 31 YRSIDLFAGIGGIRKGFDNAFGDA-IRTVFVSEWDEHAQKTYRANYNDSFEIAGDITKIA 89 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++I D+ LAGFPCQ FS AG Sbjct: 90 AEEIAPFDICLAGFPCQAFSMAG 112 >gi|220903552|ref|YP_002478864.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867851|gb|ACL48186.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 310 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++I LF G GG+ L L Q + E ++++ + V TY+ N N + GDI KI Sbjct: 1 MRIVSLFSGAGGLDLGLIQAGH----EIVWANDFDKDCVATYKKNIGNHAVLGDIKKINA 56 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 IP +V++ GFPCQ FSQA Sbjct: 57 SQIPRGEVVVGGFPCQGFSQA 77 >gi|209527672|ref|ZP_03276170.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209491900|gb|EDZ92257.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 429 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 42/83 (50%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 K DLF GIGG+RL EQ +C SSEI+ + + YQANF T GDI I Sbjct: 5 KFIDLFAGIGGLRLGFEQALESLGCIPDCLLSSEIDGDARQVYQANFSETPQ-GDIQTIP 63 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + +P H VLLAGFPCQ FS AG Sbjct: 64 S--LPPHHVLLAGFPCQSFSYAG 84 >gi|166367718|ref|YP_001659991.1| modification methylase [Microcystis aeruginosa NIES-843] gi|166090091|dbj|BAG04799.1| modification methylase [Microcystis aeruginosa NIES-843] Length = 159 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 39/84 (46%), Positives = 55/84 (65%), Gaps = 3/84 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ++ DLFCG+GG R+ +E+ +N+E C FS +I+ + Y ANF + GDI +I Sbjct: 10 IRFIDLFCGLGGFRVAIERVCRQKNLESDCVFSCDIDKDARAIYHANFGDQPQ-GDITEI 68 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 DIP+HD+L+AGFPCQPFS G Sbjct: 69 AALDIPNHDILMAGFPCQPFSICG 92 >gi|307290179|ref|ZP_07570098.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0411] gi|306498807|gb|EFM68305.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0411] Length = 416 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A T + DI I Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----ECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I DV+ GFPCQ FS AG Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83 >gi|260890952|ref|ZP_05902215.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254] gi|260859505|gb|EEX74005.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254] Length = 452 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 8/84 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ LF G GG+ L + + E ++++ +V+TY+ N N ++ GDI I ++ Sbjct: 10 KVISLFSGAGGMDLGIIKA----GFEVIWANDFEKDAVETYRRNIGNHIVLGDITMISSK 65 Query: 63 DIP----DHDVLLAGFPCQPFSQA 82 +IP + D+++ GFPCQ FS A Sbjct: 66 EIPLKKGEVDLIIGGFPCQGFSIA 89 >gi|15088756|ref|NP_150145.1| putative DNA methylase [Streptococcus phage MM1] gi|15074902|emb|CAC48079.1| putative DNA methylase [Streptococcus phage MM1] gi|73747029|gb|AAZ82425.1| C5 methyltransferase alpha subunit [Streptococcus phage MM1 1998] Length = 385 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 +K DLF GIGG R+ +E + EC EI+ ++ +Y+A + DI + Sbjct: 1 MKFLDLFAGIGGFRIGMESAGH----ECIGFCEIDKFARASYKAIHDTKGEIELHDITTV 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 I DV+ GFPCQ FS AG Sbjct: 57 SDDTIRGIGHVDVICGGFPCQAFSIAG 83 >gi|160933407|ref|ZP_02080795.1| hypothetical protein CLOLEP_02253 [Clostridium leptum DSM 753] gi|156867284|gb|EDO60656.1| hypothetical protein CLOLEP_02253 [Clostridium leptum DSM 753] Length = 382 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 + DLF GIGG R L + C EI+ Y+ ++Y+A F D+ + Sbjct: 5 ITYIDLFSGIGGFREGLSRAG---GFVCVGHCEIDKYADQSYRALFDTKGEWFREDVREA 61 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 ++PD D+L GFPCQ FS AG Sbjct: 62 DPDEMPDFDLLCGGFPCQSFSIAG 85 >gi|311279100|ref|YP_003941331.1| DNA-cytosine methyltransferase [Enterobacter cloacae SCF1] gi|308748295|gb|ADO48047.1| DNA-cytosine methyltransferase [Enterobacter cloacae SCF1] Length = 492 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 40/102 (39%), Positives = 50/102 (49%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ + DI Sbjct: 108 FRFIDLFAGIGGIRHGFEA----IGGQCVFTSEWNKHAVRTYKANWYCSPQDHQFNDDIR 163 Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83 + IP HDVLLAGFPCQPFS AG Sbjct: 164 SVTLSHQPNVTDGEAAEHIRGVIPQHDVLLAGFPCQPFSLAG 205 >gi|168494837|ref|ZP_02718980.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|168494899|ref|ZP_02719042.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|168494952|ref|ZP_02719095.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|168494999|ref|ZP_02719142.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|183575153|gb|EDT95681.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|183575203|gb|EDT95731.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|183575231|gb|EDT95759.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] gi|183575300|gb|EDT95828.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae CDC3059-06] Length = 360 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 +K DLF GIGG RL +E + +C EI+ ++ ++Y+ N + DI + Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----KCIGFCEIDKFARESYKAIHNTKGEIELHDITAV 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I D++ GFPCQ FS AG Sbjct: 57 SDESIRGIGSVDIICGGFPCQAFSIAG 83 >gi|327534643|gb|AEA93477.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis OG1RF] Length = 334 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ DLF GIGG RL +E +H C EI+ Y+ K+YQA + DI + Sbjct: 1 MEFLDLFAGIGGFRLGMEMAGHH----CIGFCEIDKYARKSYQAIHQTKGEIELHDITSV 56 Query: 60 K---TQDIPDHDVLLAGFPCQPFSQAG 83 Q I D+L GFPCQ FS AG Sbjct: 57 SNEFIQSIGHTDILCGGFPCQAFSIAG 83 >gi|315150308|gb|EFT94324.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0012] Length = 334 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ DLF GIGG RL +E +H C EI+ Y+ K+YQA + DI + Sbjct: 1 MEFLDLFAGIGGFRLGMEMAGHH----CIGFCEIDKYARKSYQAIHQTKGEIELHDITSV 56 Query: 60 KTQDIPDH---DVLLAGFPCQPFSQAG 83 + I D+L GFPCQ FS AG Sbjct: 57 SNEFIRSIGHTDILCGGFPCQAFSIAG 83 >gi|308184574|ref|YP_003928707.1| site-specific DNA methylase [Helicobacter pylori SJM180] gi|308060494|gb|ADO02390.1| site-specific DNA methylase [Helicobacter pylori SJM180] Length = 405 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 KI LF G GG+ L E ++++ +V+TYQ N + +I+GDI KI + Sbjct: 6 YKIISLFSGCGGLDLGF----IKEGFEVIWANDFFKEAVETYQKNIGSHIIYGDITKIPS 61 Query: 62 QDIP-DHDVLLAGFPCQPFSQA 82 DIP + DVLL GFPCQ FS A Sbjct: 62 GDIPNECDVLLGGFPCQGFSVA 83 >gi|255972594|ref|ZP_05423180.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T1] gi|256762698|ref|ZP_05503278.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T3] gi|257422413|ref|ZP_05599403.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis X98] gi|255963612|gb|EET96088.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T1] gi|256683949|gb|EEU23644.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T3] gi|257164237|gb|EEU94197.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis X98] Length = 351 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A T + DI I Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----ECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I DV+ GFPCQ FS AG Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83 >gi|46191283|ref|ZP_00120453.2| COG0270: Site-specific DNA methylase [Bifidobacterium longum DJO10A] Length = 315 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 2/77 (2%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDIPD 66 F GIGGIR+ + Q +SSE N YSV+TY+AN+ + + GDI K+ D+PD Sbjct: 2 FAGIGGIRMGMVQALGDA-AHVVYSSEWNKYSVQTYEANWHDENPVAGDITKVDEHDVPD 60 Query: 67 HDVLLAGFPCQPFSQAG 83 D+LLAGFPCQPFS AG Sbjct: 61 IDLLLAGFPCQPFSIAG 77 >gi|312903177|ref|ZP_07762357.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0635] gi|310633053|gb|EFQ16336.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0635] Length = 398 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A + DI I Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----ECIGFCEIDKFARTSYKAIHDATGEVEMHDITTI 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I DV+ GFPCQ FS AG Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83 >gi|168490143|ref|ZP_02714342.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae SP195] gi|183571468|gb|EDT91996.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus pneumoniae SP195] gi|321157174|emb|CBW39159.1| Cytosine-specific DNA methyltransferase [Streptococcus phage 11865] Length = 360 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 +K DLF GIGG RL +E + +C EI+ ++ ++Y+ N + DI + Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----KCIGFCEIDKFARESYKAIHNTKGEIELHDITAV 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I D++ GFPCQ FS AG Sbjct: 57 SDESIRGIGSVDIICGGFPCQAFSIAG 83 >gi|269122950|ref|YP_003305527.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] gi|268314276|gb|ACZ00650.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM 12112] Length = 328 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF G GG+ L ++ + ++E + +TY+ N LI GDI I + Sbjct: 1 MKIISLFSGAGGLDLGFKKA----GFDIVAANEFDKTIWETYEKNHKTHLIKGDICNIHS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 P+ D ++ G PCQ +S+AG Sbjct: 57 SMFPECDGIIGGPPCQSWSEAG 78 >gi|313674544|ref|YP_004052540.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] gi|312941242|gb|ADR20432.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] Length = 420 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG R+ ++ + +C F+SE + + TY+ANF FGDI K +T Sbjct: 98 FKFIDLFAGIGGFRIAMQ----NLGGKCIFTSEWDSKAKVTYRANFGEEP-FGDITKEET 152 Query: 62 QD-IPD-HDVLLAGFPCQPFSQAG 83 + IPD D+L AGFPCQ FS AG Sbjct: 153 KSYIPDNFDLLCAGFPCQAFSIAG 176 >gi|228969065|ref|ZP_04129983.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar sotto str. T04001] gi|228790631|gb|EEM38314.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar sotto str. T04001] Length = 326 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 L DLF GIGG RL +EQ + +C E + ++ K+Y+ N DI + Sbjct: 3 LTFIDLFAGIGGFRLGMEQAGH----KCLGYVEWDKFARKSYEAIHNTKGEWTEHDITTV 58 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 D+ DV+ GFPCQ FS AG Sbjct: 59 TNDDLRLFRGQVDVICGGFPCQAFSIAG 86 >gi|23100788|ref|NP_694255.1| cytosine-specific DNA-methyltransferase [Oceanobacillus iheyensis HTE831] gi|22779022|dbj|BAC15289.1| cytosine-specific DNA-methyltransferase [Oceanobacillus iheyensis HTE831] Length = 370 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 4/80 (5%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF GIGGI + EQ +++E++ ++ +TY+ NF + LI D+ IK D Sbjct: 5 VASLFAGIGGIDIGFEQA----GARVIWANEMDKHACETYRQNFESKLIEDDVRNIKESD 60 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +PD D++ AG+PC FS AG Sbjct: 61 MPDADIITAGWPCVAFSIAG 80 >gi|317182001|dbj|BAJ59785.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter pylori F57] Length = 434 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 3/85 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 +++ DLF G+GG+RL EQ + ++ C SSEI +++ Y +F T GDI + Sbjct: 28 IVRFVDLFAGLGGLRLGFEQASSSIGLKSQCILSSEIKKSALQAYTDHFKETPQ-GDITQ 86 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I T DIP+ DVLLAGFPCQPFS AG Sbjct: 87 INTNDIPNFDVLLAGFPCQPFSNAG 111 >gi|315162212|gb|EFU06229.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0645] Length = 398 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A T + DI I Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----ECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I DV+ GFPCQ FS AG Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83 >gi|291617874|ref|YP_003520616.1| EcoRIIM [Pantoea ananatis LMG 20103] gi|291152904|gb|ADD77488.1| EcoRIIM [Pantoea ananatis LMG 20103] Length = 459 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 41/101 (40%), Positives = 51/101 (50%), Gaps = 23/101 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E+ +C F+SE N +++TY+AN P F DI Sbjct: 89 FRFIDLFAGIGGIRRGFER----IGGKCVFTSEWNKEAIRTYRANHYSDPAEHHFNTDIR 144 Query: 58 KIK---------------TQDIPDHDVLLAGFPCQPFSQAG 83 ++ IPDH VLLAGFPCQPFS AG Sbjct: 145 QVTQPAGLTDEQAIYQSIDAAIPDHQVLLAGFPCQPFSLAG 185 >gi|16923911|gb|AAL31632.1|AF438204_2 C5 DNA methyltransferase [Positive selection vector pMTet1] Length = 418 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIR Q+F +C FSSEI+P++ TY NF + FGDI K++ Sbjct: 105 FKFIDLFSGIGGIR----QSFEVNGGKCVFSSEIDPFAKFTYYTNFG-VVPFGDITKVEA 159 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP+HD+L AGFP QP+S G Sbjct: 160 TTIPEHDILCAGFPGQPWSHMG 181 >gi|239627884|ref|ZP_04670915.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518030|gb|EEQ57896.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 325 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLFCGIGG R LE C FS + N + TYQ+N+ + GDI KI+ Sbjct: 4 FTFIDLFCGIGGFRQALES----VGGTCVFSCDKNKNARLTYQSNYGDMPD-GDITKIEA 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIP ++L AGFPCQPFS AG Sbjct: 59 KDIPPFNILCAGFPCQPFSIAG 80 >gi|265751236|ref|ZP_06087299.1| DcmB protein [Bacteroides sp. 3_1_33FAA] gi|270294601|ref|ZP_06200803.1| DNA-cytosine methyltransferase [Bacteroides sp. D20] gi|263238132|gb|EEZ23582.1| DcmB protein [Bacteroides sp. 3_1_33FAA] gi|270276068|gb|EFA21928.1| DNA-cytosine methyltransferase [Bacteroides sp. D20] Length = 466 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +K+ F G GG+ L EQ E +++E + KTYQ N PNT + DI K+K Sbjct: 1 MKVASFFAGCGGLDLGFEQA----GYEVVWANEFDEAIHKTYQFNHPNTYLCKSDIRKLK 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +DIPD D + G PCQ +S+ G Sbjct: 57 GEDIPDCDGFIGGPPCQSWSEGG 79 >gi|317056067|ref|YP_004104534.1| DNA-cytosine methyltransferase [Ruminococcus albus 7] gi|315448336|gb|ADU21900.1| DNA-cytosine methyltransferase [Ruminococcus albus 7] Length = 425 Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAK 58 M+K D+F GIGG R LE+ EC E + ++ + Y+A + L F D K Sbjct: 1 MIKFFDIFAGIGGFRSGLEKVG---GFECVGYCECDKFAKQAYEALYDTRKELYFDDARK 57 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I +++PD D++ GFPCQ FS AG Sbjct: 58 IDPEELPDIDLICGGFPCQSFSIAG 82 >gi|218900598|ref|YP_002449009.1| modification methylase HaeIII [Bacillus cereus G9842] gi|218544695|gb|ACK97089.1| modification methylase HaeIII [Bacillus cereus G9842] Length = 313 Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++K+ LF G GG+ L Q + E +++++ + +TY+ N N ++ D+ ++ Sbjct: 3 IMKVISLFSGAGGMDLGFIQAGH----EIIWANDLYEDAAETYKKNIGNHIVLKDLKEVD 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 T +IPD D+++ GFPCQ FS A Sbjct: 59 TNNIPDGDIVIGGFPCQGFSVA 80 >gi|218699478|ref|YP_002407107.1| DNA cytosine methylase [Escherichia coli IAI39] gi|218369464|emb|CAR17229.1| DNA cytosine methylase [Escherichia coli IAI39] Length = 472 Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG---- 54 + DLF GIGGIR E +C F+ E N ++V+TY+AN P T F Sbjct: 87 FRFIDLFAGIGGIRRGFES----IGGQCVFTREWNKHAVRTYKANHYCDPATHHFNEDTR 142 Query: 55 DIA-------------KIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI + Q IP+HDVLLAGFPCQPFS AG Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184 >gi|327394286|dbj|BAK11708.1| modification methylase EcoRII [Pantoea ananatis AJ13355] Length = 459 Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 41/101 (40%), Positives = 51/101 (50%), Gaps = 23/101 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E+ +C F+SE N +++TY+AN P F DI Sbjct: 89 FRFIDLFAGIGGIRRGFER----IGGKCVFTSEWNKEAIRTYRANHYSDPAEHHFNTDIR 144 Query: 58 KIK---------------TQDIPDHDVLLAGFPCQPFSQAG 83 ++ IPDH VLLAGFPCQPFS AG Sbjct: 145 QVTQPAGLTDEQAIYQSIDAAIPDHQVLLAGFPCQPFSLAG 185 >gi|125974232|ref|YP_001038142.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC 27405] gi|125714457|gb|ABN52949.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC 27405] Length = 483 Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 + D F GIGG RL LE + +C E + ++VK+Y+A F D+ K+ Sbjct: 1 MTFLDFFAGIGGFRLGLELAGH----KCIGFCEKDKFAVKSYRAMFDTEGEWYADDVTKL 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K++DIP D+ GFPCQ S AG Sbjct: 57 KSEDIPYADIWCFGFPCQDISVAG 80 >gi|302347057|ref|YP_003815355.1| putative modification methylase HhaI [Prevotella melaninogenica ATCC 25845] gi|302150379|gb|ADK96640.1| putative modification methylase HhaI [Prevotella melaninogenica ATCC 25845] Length = 453 Score = 121 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG L L + +C FSSE+ K YQ N+P I GDI KI Sbjct: 7 LQFIDLFAGLGGFHLALSK----LGCKCVFSSELKEDLRKLYQINYPGVRIEGDITKIAP 62 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIP HD++ AGFPCQPFSQAG Sbjct: 63 KDIPAHDIICAGFPCQPFSQAG 84 >gi|125974805|ref|YP_001038715.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC 27405] gi|125715030|gb|ABN53522.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC 27405] Length = 334 Score = 121 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + LF G GG+ + LE + ++++I+ + TY+ ++ GDIAKI Sbjct: 15 YTVASLFAGAGGLDMGLELA----GFKTVWANDIDKDACATYRLWSQADVVQGDIAKIDY 70 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+PD DV+ GFPCQ FS AG Sbjct: 71 SDVPDTDVITGGFPCQGFSLAG 92 >gi|259908144|ref|YP_002648500.1| DNA cytosine methylase [Erwinia pyrifoliae Ep1/96] gi|224963766|emb|CAX55267.1| DNA-cytosine methyltransferase [Erwinia pyrifoliae Ep1/96] gi|283478063|emb|CAY73979.1| DNA cytosine methylase [Erwinia pyrifoliae DSM 12163] Length = 467 Score = 121 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ DI Sbjct: 93 FRFIDLFAGIGGIRSGFEA----IGGQCAFTSEWNKHAVRTYKANWYCDERQHRFNQDIR 148 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 + Q +PDHDVLLAGFPCQPFS AG Sbjct: 149 DVTLSGKPEITDRQAYQHIQQQVPDHDVLLAGFPCQPFSLAG 190 >gi|291530357|emb|CBK95942.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3] Length = 317 Score = 121 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF GIGGI L EQ + +++EI+ + KTYQ NFP T LI DI K+ Sbjct: 1 MKLGSLFAGIGGIELGFEQ----VGFDIVWANEIDTDACKTYQFNFPKTKLIKSDIRKVN 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++ D++ AGFPCQPFS G Sbjct: 57 FSELEKIDIITAGFPCQPFSVCG 79 >gi|332673536|gb|AEE70353.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 83] Length = 434 Score = 121 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 3/85 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 +++ DLF G+GG+RL EQ + ++ C SSEI +++ Y +F T GDI + Sbjct: 28 IVRFVDLFAGLGGLRLGFEQASSSIGLKSQCILSSEIKKSALQAYIDHFKETPQ-GDITQ 86 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I T DIP+ DVLLAGFPCQPFS AG Sbjct: 87 INTNDIPNFDVLLAGFPCQPFSNAG 111 >gi|213053466|ref|ZP_03346344.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 320 Score = 121 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|319757724|gb|ADV69666.1| DNA-cytosine methyltransferase [Streptococcus suis JS14] Length = 451 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A F + + DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGMEA----QGHECLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 D +V+ GFPCQ FS AG Sbjct: 57 TDHDFRQFRGQVEVICGGFPCQAFSLAG 84 >gi|116627564|ref|YP_820183.1| site-specific DNA methylase [Streptococcus thermophilus LMD-9] gi|116100841|gb|ABJ65987.1| Site-specific DNA methylase [Streptococcus thermophilus LMD-9] Length = 406 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG+ L + ++++ +V+TY+ N N ++ GDI KI + Sbjct: 4 LNLLSLFSGAGGMDLGFKNA----GFNILWANDFQKDAVETYKNNIGNHIVLGDITKIDS 59 Query: 62 QDIP--DHDVLLAGFPCQPFSQA 82 +IP D DV++ GFPCQ FS A Sbjct: 60 SEIPGTDIDVVIGGFPCQGFSIA 82 >gi|27497145|gb|AAO17336.1| methylase [Neisseria lactamica] Length = 384 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA-KIK 60 DLF GIGG R+ ++ + EC FSSE + + +TY+ANF FGDI + Sbjct: 58 FTFIDLFAGIGGFRIAMQ----NLGGECVFSSEWDEKAKQTYEANFGEVP-FGDITLEET 112 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 Q IP+ DVL AGFPCQ FS AG Sbjct: 113 KQCIPEQFDVLCAGFPCQAFSIAG 136 >gi|319412045|emb|CBY91978.1| C-5-cytosine-specific DNA methylase [Streptococcus pneumoniae] Length = 452 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ DLF GIGG RL +E + EC EI+ ++ K+Y++ F + F DI + Sbjct: 1 MRFIDLFSGIGGFRLGMESVRH----ECIGFCEIDKFARKSYKSFFQTEGEIEFRDIRDV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 + DV+ GFPCQ FS AG Sbjct: 57 SDDEFKKLRGKVDVICGGFPCQAFSIAG 84 >gi|296126993|ref|YP_003634245.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563] gi|296018809|gb|ADG72046.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563] Length = 324 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 DLF GIGG R+ LE +C +S+E + ++ ++Y NF + + DI KI + Sbjct: 13 TFIDLFAGIGGFRIALES----LGAKCVYSNEWDKFAKESYYKNFGD-IPDDDITKIDEK 67 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 IP HD+L AGFPCQ FS +G Sbjct: 68 LIPAHDILCAGFPCQAFSISG 88 >gi|260886138|ref|ZP_05736578.2| modification methylase EcoRII [Prevotella tannerae ATCC 51259] gi|260850757|gb|EEX70626.1| modification methylase EcoRII [Prevotella tannerae ATCC 51259] Length = 427 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 41/84 (48%), Positives = 50/84 (59%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF G+GG RL L++ C +SSE P + +TY AN+ FGDI K T Sbjct: 105 FKFIDLFAGVGGFRLALQR----IGGRCVYSSEFEPNAQQTYLANYGEMP-FGDITKEST 159 Query: 62 QD-IPD-HDVLLAGFPCQPFSQAG 83 + IPD DVL AGFPCQPFS +G Sbjct: 160 KSYIPDNFDVLCAGFPCQPFSISG 183 >gi|261839203|gb|ACX98968.1| DNA-cytosine methyltransferase [Helicobacter pylori 52] Length = 309 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIGG Q E +++E++ + TY+ANF + L+ DI + Sbjct: 1 MKVGSLFAGIGGFECAFLQA----GFEIGWANELDKDACNTYRANFKHKLLEQDIKDLNP 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ D ++ AGFPCQ FS AG Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78 >gi|326798326|ref|YP_004316145.1| DNA-cytosine methyltransferase [Sphingobacterium sp. 21] gi|326549090|gb|ADZ77475.1| DNA-cytosine methyltransferase [Sphingobacterium sp. 21] Length = 409 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGG RL + +C F+SE N + +TY+ANF FGDI K T Sbjct: 85 FTFIDLFAGIGGFRL----ACQNLGGKCVFTSEWNESAKRTYEANFAEVP-FGDITKEST 139 Query: 62 QD-IPD-HDVLLAGFPCQPFSQAG 83 + IP DVL AGFPCQ FS AG Sbjct: 140 KAFIPKQFDVLCAGFPCQAFSIAG 163 >gi|293568986|ref|ZP_06680299.1| methyl transferase [Enterococcus faecium E1071] gi|291588419|gb|EFF20254.1| methyl transferase [Enterococcus faecium E1071] Length = 380 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 ++ DLF GIGG RL +EQ + +C EI+ ++ ++Y+A + DI ++ Sbjct: 1 MRFLDLFAGIGGFRLGMEQAGH----QCIGFCEIDEFARRSYKAIHDTRKEVEMHDITRV 56 Query: 60 K---TQDIPDHDVLLAGFPCQPFSQAG 83 Q + DVL GFPCQ FS AG Sbjct: 57 SDEFVQSLGPVDVLCGGFPCQAFSIAG 83 >gi|312901958|ref|ZP_07761220.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0470] gi|311290894|gb|EFQ69450.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0470] Length = 380 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 ++ DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + DI + Sbjct: 1 MRFLDLFAGIGGFRLGMEQASHH----CIGFCEIDKFARRSYKAIHDTSKEVEMHDITSV 56 Query: 60 KTQDIPD---HDVLLAGFPCQPFSQAG 83 + I D+L GFPCQ FS AG Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83 >gi|237732007|ref|ZP_04562488.1| DNA cytosine methylase [Citrobacter sp. 30_2] gi|226907546|gb|EEH93464.1| DNA cytosine methylase [Citrobacter sp. 30_2] Length = 476 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-FPNTLIFG---DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN + + L DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANNYCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q +P+HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHHDGVSDQQAAEHIRQHVPEHDVLLAGFPCQPFSLAG 188 >gi|291085206|ref|ZP_06352388.2| DNA (cytosine-5-)-methyltransferase [Citrobacter youngae ATCC 29220] gi|291072321|gb|EFE10430.1| DNA (cytosine-5-)-methyltransferase [Citrobacter youngae ATCC 29220] Length = 476 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-FPNTLIFG---DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN + + L DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANNYCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q +P+HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHHDGVSDQQAAEHIRQHVPEHDVLLAGFPCQPFSLAG 188 >gi|327474139|gb|EGF19549.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus sanguinis SK408] Length = 480 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 L+ DLF GIGG RL +E + EC EI+ ++ ++Y++ F + F DI + Sbjct: 29 LRFIDLFSGIGGFRLGMESVGH----ECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 84 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 + D++ GFPCQ FS AG Sbjct: 85 SDDEFKKLRGKVDIICGGFPCQAFSIAG 112 >gi|213024641|ref|ZP_03339088.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 189 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|315035876|gb|EFT47808.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0027] Length = 298 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A T + DI I Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----ECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56 Query: 60 KTQ---DIPDHDVLLAGFPCQPFSQAG 83 + +I DV+ GFPCQ FS AG Sbjct: 57 SDEFIREIGSVDVICGGFPCQAFSIAG 83 >gi|22538008|ref|NP_688859.1| prophage LambdaSa2, type II DNA modification methyltransferase [Streptococcus agalactiae 2603V/R] gi|22534910|gb|AAN00732.1|AE014276_13 prophage LambdaSa2, type II DNA modification methyltransferase, putative [Streptococcus agalactiae 2603V/R] Length = 437 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 +K DLF GIGG RL +EQ + EC EIN ++ +Y+ + DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGMEQAGH----ECIGFCEINKFARASYKVIHDTEGEIELHDITRV 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I DV+ GFPCQ FS AG Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83 >gi|91782477|ref|YP_557683.1| C-5 cytosine-specific DNA methylase [Burkholderia xenovorans LB400] gi|91686431|gb|ABE29631.1| C-5 cytosine-specific DNA methylase [Burkholderia xenovorans LB400] Length = 418 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 41/86 (47%), Positives = 48/86 (55%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 ++ DLF GIGGIR E C F+SE N +S KTYQ N+ + GDI Sbjct: 69 FRLVDLFAGIGGIRRGFEA----HGGRCVFTSEWNDFSKKTYQENYRDCDDAHQFVGDIV 124 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 +P HDVLLAGFPCQPFS AG Sbjct: 125 SFDVASVPSHDVLLAGFPCQPFSIAG 150 >gi|213864727|ref|ZP_03386846.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 237 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 I Q IP HDVLLAGFPCQPFS AG Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188 >gi|304398880|ref|ZP_07380750.1| DNA-cytosine methyltransferase [Pantoea sp. aB] gi|304353584|gb|EFM17961.1| DNA-cytosine methyltransferase [Pantoea sp. aB] Length = 458 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 42/101 (41%), Positives = 51/101 (50%), Gaps = 23/101 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN P F DI Sbjct: 89 FRFIDLFAGIGGIRKGFEA----IGGKCVFTSEWNKEAVRTYKANHYSDPLEHHFNTDIR 144 Query: 58 KIKTQD---------------IPDHDVLLAGFPCQPFSQAG 83 ++ + IPDH VLLAGFPCQPFS AG Sbjct: 145 QVTQPEGLTDDDAIYRAIDAAIPDHQVLLAGFPCQPFSLAG 185 >gi|217964683|ref|YP_002350361.1| cytosine-specific methyltransferase [Listeria monocytogenes HCC23] gi|217333953|gb|ACK39747.1| cytosine-specific methyltransferase [Listeria monocytogenes HCC23] Length = 340 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 +K DLF GIGG RL +E+ + EC EI+ K+YQA DI K+ Sbjct: 1 MKFLDLFAGIGGFRLGMERAGH----ECVGYVEIDKSPRKSYQAIHDTEGEWTREDITKV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 ++ D++ GFPCQ FS AG Sbjct: 57 TDEEWRTLRGTVDIICGGFPCQSFSIAG 84 >gi|5420107|emb|CAB46561.1| cytosine-specific methyltransferase [Streptococcus thermophilus] Length = 316 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML + F G+GGI L E+ + +++E + Y+ T++ NF T+ DI + Sbjct: 1 MLTVASFFAGVGGIDLGFEKA----GFKTIYANEFDNYAADTFELNFDVTVDRRDINTVP 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +DIP+ DV+LAGFPCQ FS AG Sbjct: 57 AEDIPNFDVMLAGFPCQAFSIAG 79 >gi|308061704|gb|ADO03592.1| DNA-cytosine methyltransferase [Helicobacter pylori Cuz20] gi|308063214|gb|ADO05101.1| DNA-cytosine methyltransferase [Helicobacter pylori Sat464] gi|317180749|dbj|BAJ58535.1| DNA-cytosine methyltransferase [Helicobacter pylori F32] Length = 309 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIGG Q E +++E++ + TY+ANF + L+ DI + Sbjct: 1 MKVGSLFAGIGGFECAFLQA----GFEIGWANELDKDACNTYRANFKHKLLEQDIKDLNP 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ D ++ AGFPCQ FS AG Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78 >gi|307244197|ref|ZP_07526312.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus stomatis DSM 17678] gi|306492347|gb|EFM64385.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus stomatis DSM 17678] Length = 534 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ LF G GG+ L +Q E ++++ + + + Y+ NF + I + + Sbjct: 197 KLVSLFSGCGGMDLGFKQA----GYEIVYANDFDSDAQRVYEKNFG-EIDKRSILDVDEK 251 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +IPD D+L AGFPCQPFS AG Sbjct: 252 EIPDCDILTAGFPCQPFSNAG 272 >gi|255520393|ref|ZP_05387630.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes FSL J1-175] Length = 451 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 + DLF GIGG RL +E + C EI+ Y+ K+YQA DI K+ Sbjct: 1 MNFLDLFAGIGGFRLGMEAAGH----TCVGYVEIDKYARKSYQAIHDTEGEWTAHDITKV 56 Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83 + + DV+ GFPCQ FS AG Sbjct: 57 TDDEWRELRGTVDVICGGFPCQSFSIAG 84 >gi|188527161|ref|YP_001909848.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi470] gi|188143401|gb|ACD47818.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi470] Length = 309 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIGG Q E +++E++ + TY+ANF + L+ DI + Sbjct: 1 MKVGSLFAGIGGFECAFLQA----GFEIDWANELDKDACNTYRANFKHKLLEQDIKDLNP 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ D ++ AGFPCQ FS AG Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78 >gi|322514130|ref|ZP_08067198.1| modification methylase NgoPII [Actinobacillus ureae ATCC 25976] gi|322120016|gb|EFX92002.1| modification methylase NgoPII [Actinobacillus ureae ATCC 25976] Length = 356 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LFCG GG+ L E+ E ++E + T++AN P T LI GDI IK Sbjct: 1 MKVISLFCGCGGLDLGFEKA----GFEVPVANEYDKTIWATFKANHPKTRLIEGDIRNIK 56 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 +D PD D ++ G PCQ +S+AG Sbjct: 57 EEDFPDEIDGIIGGPPCQSWSEAG 80 >gi|317008995|gb|ADU79575.1| DNA-cytosine methyltransferase [Helicobacter pylori India7] Length = 309 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIGG Q E +++E++ + TY+ANF + L+ DI + Sbjct: 1 MKVGSLFAGIGGFECAFLQA----GFEIGWANELDKDACNTYRANFKHKLLEQDIKDLNP 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ D ++ AGFPCQ FS AG Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78 >gi|317181696|dbj|BAJ59480.1| DNA-cytosine methyltransferase [Helicobacter pylori F57] Length = 309 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIGG Q E +++E++ + TY+ANF + L+ DI + Sbjct: 1 MKVGSLFAGIGGFECAFLQA----GFEIGWANELDKDACNTYRANFKHKLLEQDIKDLNP 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ D ++ AGFPCQ FS AG Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78 >gi|127459|sp|P15446|MTH2_HAEPA RecName: Full=Modification methylase HpaII; Short=M.HpaII; AltName: Full=Cytosine-specific methyltransferase HpaII gi|43630|emb|CAA35705.1| unnamed protein product [Haemophilus parainfluenzae] gi|305377|gb|AAA20481.1| HpaII modification methyltransferase [Haemophilus parainfluenzae] Length = 358 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA-KIK 60 DLF GIGG R+ ++ + +C FSSE + + KTY+ANF + L +GDI + Sbjct: 32 FTFIDLFAGIGGFRIAMQ----NLGGKCIFSSEWDEQAQKTYEANFGD-LPYGDITLEET 86 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 IP+ D+L AGFPCQ FS AG Sbjct: 87 KAFIPEKFDILCAGFPCQAFSIAG 110 >gi|268604583|ref|ZP_06138750.1| cytosine methylase [Neisseria gonorrhoeae PID1] gi|268588714|gb|EEZ53390.1| cytosine methylase [Neisseria gonorrhoeae PID1] Length = 341 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 +KI LF G GG+ L E+ E ++E + T++AN P LI GDI KIK Sbjct: 12 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 67 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 +D P + D ++ G PCQ +S+AG Sbjct: 68 EEDFPEEIDGIIGGPPCQSWSEAG 91 >gi|1399076|gb|AAB03209.1| NgoII cytosine methylase M.NgoII [Neisseria gonorrhoeae] Length = 341 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 +KI LF G GG+ L E+ E ++E + T++AN P LI GDI KIK Sbjct: 12 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 67 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 +D P + D ++ G PCQ +S+AG Sbjct: 68 EEDFPEEIDGIIGGPPCQSWSEAG 91 >gi|309378773|emb|CBX22599.1| putative DNA cytosine methyltransferase [Neisseria lactamica Y92-1009] Length = 342 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA-KIK 60 DLF GIGG R+ ++ + EC FSSE + + +TY+ANF FGDI + Sbjct: 16 FTFIDLFAGIGGFRIAMQ----NLGGECVFSSEWDEKAKQTYEANFGEVP-FGDITLEET 70 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 Q IP+ DVL AGFPCQ FS AG Sbjct: 71 KQCIPEQFDVLCAGFPCQAFSIAG 94 >gi|225863800|ref|YP_002749178.1| cytosine-specific methyltransferase NlaX [Bacillus cereus 03BB102] gi|225788166|gb|ACO28383.1| cytosine-specific methyltransferase NlaX [Bacillus cereus 03BB102] Length = 576 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 + DLF GIGG RL +EQ + +C E + ++ K+Y+ N DI + Sbjct: 1 MNFIDLFAGIGGFRLGMEQAGH----KCLGYVEKDKFARKSYEAIHNTKGEWTAHDITAV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 D+ DV+ GFPCQ FS AG Sbjct: 57 TNDDLRLLRGQVDVICGGFPCQAFSIAG 84 >gi|462651|sp|P34906|MTF1_FUSNU RecName: Full=Modification methylase FnuDI; Short=M.FnuDI; AltName: Full=Cytosine-specific methyltransferase FnuDI gi|2961231|gb|AAC05695.1| FnuDI DNA modification methyltransferase [Fusobacterium nucleatum] Length = 344 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L E+ E ++E + +TY+ N LI DI +I + Sbjct: 1 MKLLSLFSGAGGLDLGFERA----GFEIIVANEYDKTIWETYEKNHKAKLIKKDIREILS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +++P D ++ G PCQ +S+AG Sbjct: 57 EELPKSDGIIGGPPCQSWSEAG 78 >gi|262283394|ref|ZP_06061160.1| cytosine-specific methyltransferase NlaX [Streptococcus sp. 2_1_36FAA] gi|262260885|gb|EEY79585.1| cytosine-specific methyltransferase NlaX [Streptococcus sp. 2_1_36FAA] Length = 460 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 +K DLF GIGG RL +E + +C E++ ++ K+Y+A F + DI + Sbjct: 1 MKFLDLFAGIGGFRLGMEAAGH----QCVGFCEVDGFARKSYKAIFNTEKEVELHDIRSV 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I D+L GFPCQ FS AG Sbjct: 57 PDESIRGLGQVDILCGGFPCQSFSLAG 83 >gi|59802113|ref|YP_208825.1| DcmB [Neisseria gonorrhoeae FA 1090] gi|268593822|ref|ZP_06127989.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae 35/02] gi|268597735|ref|ZP_06131902.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae FA19] gi|291042825|ref|ZP_06568566.1| site-specific DNA-methyltransferase M.NgoPII [Neisseria gonorrhoeae DGI2] gi|293398154|ref|ZP_06642359.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|44873|emb|CAA30038.1| unnamed protein product [Neisseria gonorrhoeae] gi|44888|emb|CAA36888.1| NgoPII restriction and modification [Neisseria gonorrhoeae] gi|293960|gb|AAA17019.1| cytosine methylase [Neisseria gonorrhoeae] gi|59719008|gb|AAW90413.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae FA 1090] gi|268547211|gb|EEZ42629.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae 35/02] gi|268551523|gb|EEZ46542.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae FA19] gi|291013259|gb|EFE05225.1| site-specific DNA-methyltransferase M.NgoPII [Neisseria gonorrhoeae DGI2] gi|291611417|gb|EFF40487.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|227054|prf||1613419B NgoPII methylase Length = 341 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 +KI LF G GG+ L E+ E ++E + T++AN P LI GDI KIK Sbjct: 12 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 67 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 +D P + D ++ G PCQ +S+AG Sbjct: 68 EEDFPEEIDGIIGGPPCQSWSEAG 91 >gi|313668796|ref|YP_004049080.1| C-5 cytosine-specific DNA-methylase [Neisseria lactamica ST-640] gi|313006258|emb|CBN87720.1| C-5 cytosine-specific DNA-methylase [Neisseria lactamica 020-06] Length = 362 Score = 120 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA-KIK 60 DLF GIGG R+ ++ + EC FSSE + + +TY+ANF FGDI + Sbjct: 36 FTFIDLFAGIGGFRIAMQ----NLGGECVFSSEWDEKAKQTYEANFGEVP-FGDITLEET 90 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 Q IP+ DVL AGFPCQ FS AG Sbjct: 91 KQCIPEQFDVLCAGFPCQAFSIAG 114 >gi|308061739|gb|ADO03627.1| DNA-cytosine methyltransferase [Helicobacter pylori Cuz20] Length = 704 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML DLF GIGG RL L + ++C FS+E NP+++ YQANF + DI + Sbjct: 1 MLTYADLFAGIGGFRLAL----DSLGLKCVFSAENNPHAIAMYQANFDDDSTC-DITLLN 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +P+ D+L AGFPCQ FS G Sbjct: 56 PNTMPNFDILCAGFPCQAFSVCG 78 >gi|254282099|ref|ZP_04957067.1| modification methylase SsoII [gamma proteobacterium NOR51-B] gi|219678302|gb|EED34651.1| modification methylase SsoII [gamma proteobacterium NOR51-B] Length = 356 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 37/91 (40%), Positives = 46/91 (50%), Gaps = 14/91 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG RL LE + F+SE + + + Y N + FGDI K Sbjct: 28 FKFIDLFAGIGGFRLGLEA----QGGRSVFASEWDKTAKEYYFRNHGDYP-FGDINKFTG 82 Query: 62 QDI---------PDHDVLLAGFPCQPFSQAG 83 + + PDHD+L GFPCQPFS AG Sbjct: 83 EHLSDEQVDQLVPDHDLLAGGFPCQPFSIAG 113 >gi|169834211|ref|YP_001693507.1| hypothetical protein SPH_0083 [Streptococcus pneumoniae Hungary19A-6] gi|168996713|gb|ACA37325.1| hypothetical protein SPH_0083 [Streptococcus pneumoniae Hungary19A-6] Length = 255 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 +K DLF GIGG R+ +E + EC EI+ ++ +Y+A + DI + Sbjct: 1 MKFLDLFAGIGGFRIGMESAGH----ECIGFCEIDKFARASYKAIHDTKGEIELHDITTV 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 I DV+ GFPCQ FS AG Sbjct: 57 SDDTIRGIGHVDVICGGFPCQAFSIAG 83 >gi|293975|gb|AAB59071.1| cytosine methylase [Neisseria gonorrhoeae] Length = 341 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 +KI LF G GG+ L E+ E ++E + T++AN P LI GDI KIK Sbjct: 12 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 67 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 +D P + D ++ G PCQ +S+AG Sbjct: 68 EEDFPEEIDGIIGGPPCQSWSEAG 91 >gi|145629544|ref|ZP_01785342.1| condesin subunit E [Haemophilus influenzae 22.1-21] gi|144978387|gb|EDJ88151.1| condesin subunit E [Haemophilus influenzae 22.1-21] Length = 95 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 44/82 (53%), Positives = 49/82 (59%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIRL E + FSSE + Y+ Y+ NF FGDI I Sbjct: 4 YKTIDLFAGIGGIRLGFEA----FGCKNVFSSEWDKYAQSMYEVNFGEKP-FGDINDISP 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+LLAGFPCQPFS AG Sbjct: 59 SDIPDHDILLAGFPCQPFSIAG 80 >gi|261400408|ref|ZP_05986533.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970] gi|269209852|gb|EEZ76307.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970] Length = 362 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA-KIK 60 DLF GIGG R+ ++ + EC FSSE + + +TY+ANF FGDI + Sbjct: 36 FTFIDLFAGIGGFRIAMQ----NLGGECVFSSEWDEKAKQTYEANFGEVP-FGDITLEET 90 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 Q IP+ DVL AGFPCQ FS AG Sbjct: 91 KQCIPEQFDVLCAGFPCQAFSIAG 114 >gi|224436796|ref|ZP_03657794.1| modification methylase HaeIII [Helicobacter cinaedi CCUG 18818] gi|313143285|ref|ZP_07805478.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi CCUG 18818] gi|313128316|gb|EFR45933.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi CCUG 18818] Length = 305 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L + E F+++I+ + ++YQ N N ++ DI ++ Sbjct: 4 IKVISLFSGCGGLDLGFIKA----GFEIVFANDIDKEACESYQKNIGNHIVCKDIYTLEV 59 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 ++IP+ D+L+ GFPC F+ A Sbjct: 60 EEIPNADILIGGFPCLGFTIA 80 >gi|20530828|gb|AAM27270.1|AF507962_1 methyl transferase [Lactococcus lactis] Length = 185 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 +K DLF GIGG RL LEQ + EC EI+ ++ ++Y+ N + DI + Sbjct: 1 MKFLDLFAGIGGFRLGLEQAGH----ECVGFCEIDKFARQSYKAIHNTEGEREYHDITTV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 ++ +++ GFPCQ FS AG Sbjct: 57 SNEEWRTLRGTVELICGGFPCQSFSIAG 84 >gi|2765225|emb|CAA73243.1| methylase [Lactococcus lactis subsp. cremoris] Length = 317 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 MLKI F G+GGI L E + +++E + Y+ T++ NF + DI ++ Sbjct: 1 MLKIASFFAGVGGIDLGFENA----GFKTIYANEFDNYAADTFEMNFDVKVDRRDINDVQ 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +IPD D++LAGFPCQ FS AG Sbjct: 57 ADEIPDFDIMLAGFPCQAFSIAG 79 >gi|167751358|ref|ZP_02423485.1| hypothetical protein EUBSIR_02344 [Eubacterium siraeum DSM 15702] gi|167655604|gb|EDR99733.1| hypothetical protein EUBSIR_02344 [Eubacterium siraeum DSM 15702] Length = 316 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 + I LF GIGGI L EQ ++++IN + KTY+ NFPN ++ DI + Sbjct: 1 MTIGSLFAGIGGIDLGFEQA----GFRAIWANDINKNACKTYRYNFPNVNLYECDIRSLD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + DVL AGFPCQPFS G Sbjct: 57 PSILQPVDVLTAGFPCQPFSVCG 79 >gi|223933016|ref|ZP_03625010.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591] gi|223898333|gb|EEF64700.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591] Length = 451 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL +E + +C EI+ ++ +Y+A F + + DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGMES----QGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 D +V+ GFPCQ FS AG Sbjct: 57 TDHDFRQFRGQVEVICGGFPCQAFSLAG 84 >gi|10957343|ref|NP_058367.1| DNA cytosine methylase [Salmonella typhi] gi|7800396|gb|AAF69992.1|AF250878_153 EcoRII cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi] gi|145849042|emb|CAM91602.1| ecoRII cytosine methylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 475 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57 + DLF GIGG+R + +C F+SE N +S +TY AN+ DI Sbjct: 92 FRFIDLFAGIGGLRSGFDA----IGGKCVFTSEWNQFSRRTYSANWYCEDTEHHFNSDIR 147 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I IPDHDVLLAGFPCQPFS AG Sbjct: 148 DITLSNLPDVSEDQAYASIAASIPDHDVLLAGFPCQPFSIAG 189 >gi|315611977|ref|ZP_07886895.1| C-5 cytosine-specific DNA methylase [Streptococcus sanguinis ATCC 49296] gi|315315966|gb|EFU64000.1| C-5 cytosine-specific DNA methylase [Streptococcus sanguinis ATCC 49296] Length = 359 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A + DI + Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----ECIGFCEIDKFARASYKAIHDTKGEIELHDITAV 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I D++ GFPCQ FS AG Sbjct: 57 SDESIRRIGRVDIICGGFPCQAFSIAG 83 >gi|293371782|ref|ZP_06618192.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CMC 3f] gi|292633234|gb|EFF51805.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CMC 3f] Length = 161 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 +KI LF G GG+ L E+ + +++E + KTY+ N NT++ I I Sbjct: 1 MKIVSLFAGAGGLDLGFERA----GFDIVWANEYDKDIWKTYEKNHSNTILDKRSITDIP 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 T DIP+ D ++ G PCQ +S+AG Sbjct: 57 TTDIPECDGIIGGPPCQSWSEAG 79 >gi|325132717|gb|EGC55400.1| DNA-cytosine methyltransferase [Neisseria meningitidis M6190] gi|325136737|gb|EGC59337.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579] gi|325138603|gb|EGC61162.1| DNA-cytosine methyltransferase [Neisseria meningitidis ES14902] gi|325142796|gb|EGC65168.1| DNA-cytosine methyltransferase [Neisseria meningitidis 961-5945] gi|325198710|gb|ADY94166.1| DNA-cytosine methyltransferase [Neisseria meningitidis G2136] gi|325201728|gb|ADY97182.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149] gi|325204572|gb|ADZ00026.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240355] gi|325208528|gb|ADZ03980.1| DNA-cytosine methyltransferase [Neisseria meningitidis NZ-05/33] Length = 316 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 KI LF G GG+ L F N + +++EI+ ++V+TY+ N N ++ G Sbjct: 14 YKIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHG 73 Query: 55 DIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 DI + +IP D+++ GFPCQ S G Sbjct: 74 DIWQ-HLDEIPTSADIIIGGFPCQDISING 102 >gi|317010127|gb|ADU80707.1| DNA-cytosine methyltransferase [Helicobacter pylori India7] Length = 703 Score = 119 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML DLF GIGG RL L + ++C FS+E NP+++ Y+ANF + DI + Sbjct: 1 MLTYADLFAGIGGFRLAL----DSLGLKCVFSAENNPHAIAMYKANFNDDSTC-DITILN 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +P+ D+L AGFPCQ FS G Sbjct: 56 PNTMPNFDILCAGFPCQAFSVCG 78 >gi|320326214|gb|EFW82269.1| cytosine-specific DNA-methyltransferase [Pseudomonas syringae pv. glycinea str. B076] Length = 448 Score = 119 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF G+GG L L++ EC F++E + + Y NF GDI + Sbjct: 4 FRFVDLFAGLGGFHLALDR----LGGECVFAAEWKEHLREIYNVNFG-LYPAGDITSVSL 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIPDHDVL AGFPCQPFS+AG Sbjct: 59 KDIPDHDVLTAGFPCQPFSKAG 80 >gi|301020988|ref|ZP_07185039.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1] gi|3660493|emb|CAA57706.1| M.EcoHK31I alpha polypeptide [Escherichia coli] gi|300398362|gb|EFJ81900.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1] Length = 309 Score = 119 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K++ F GIGG L LE+ +E F EIN + K + N+ + DI ++ Sbjct: 9 YKVSSFFAGIGGFDLGLEKA----GMEVVFQCEINKFCQKVLRKNWSKVPLHTDITRLNA 64 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 +IP+ +V GFPCQ S A Sbjct: 65 DEIPESNVWCGGFPCQDVSSA 85 >gi|261392162|emb|CAX49670.1| putative modification methylase (cytosine-specific methyltransferase) [Neisseria meningitidis 8013] gi|309378365|emb|CBX23011.1| putative DNA cytosine methyltransferase [Neisseria lactamica Y92-1009] Length = 389 Score = 119 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 KI LF G GG+ L F N + +++EI+ ++V+TY+ N N ++ G Sbjct: 87 YKIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHG 146 Query: 55 DIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 DI + +IP D+++ GFPCQ S G Sbjct: 147 DIWQ-HLDEIPTSADIIIGGFPCQDISING 175 >gi|269214273|ref|ZP_05986228.2| modification methylase NgoPII [Neisseria lactamica ATCC 23970] gi|269210330|gb|EEZ76785.1| modification methylase NgoPII [Neisseria lactamica ATCC 23970] Length = 330 Score = 119 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 +KI LF G GG+ L E+ E ++E + T++AN P LI GDI KIK Sbjct: 1 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 56 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 +D P+ D ++ G PCQ +S+AG Sbjct: 57 EEDFPEGIDGIIGGPPCQSWSEAG 80 >gi|207091758|ref|ZP_03239545.1| putative site-specific DNA-methyltransferase [Helicobacter pylori HPKX_438_AG0C1] Length = 703 Score = 119 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML DLF GIGG RL L + ++C FS+E NP+++ Y+ANF + DI + Sbjct: 1 MLTYADLFAGIGGFRLAL----DSLGLKCVFSAENNPHAIAMYKANFNDDSTC-DITILN 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +P+ D+L AGFPCQ FS G Sbjct: 56 PNTMPNFDILCAGFPCQAFSVCG 78 >gi|15901190|ref|NP_345794.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae TIGR4] gi|14972819|gb|AAK75434.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae TIGR4] Length = 407 Score = 119 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 10/89 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAK 58 M+ + DLF GIGG R+ +E + EC EI+ ++ K+Y++ F + F DI Sbjct: 1 MIWVLDLFAGIGGFRMGMEA----QGHECLGFCEIDKFARKSYKSIFQTEGEIEFHDIRD 56 Query: 59 IKTQDIPD----HDVLLAGFPCQPFSQAG 83 + + DV+ GFPCQ FS AG Sbjct: 57 VSDDEFKKLRGKVDVICGGFPCQAFSIAG 85 >gi|308187315|ref|YP_003931446.1| DNA cytosine methylase [Pantoea vagans C9-1] gi|308057825|gb|ADO09997.1| DNA cytosine methylase [Pantoea vagans C9-1] Length = 458 Score = 119 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 23/101 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N +V+TY+AN P F DI Sbjct: 89 FRFIDLFAGIGGIRKGFEA----IGGKCVFTSEWNKEAVRTYKANHYSDPLEHHFNTDIR 144 Query: 58 KI-------KTQDI--------PDHDVLLAGFPCQPFSQAG 83 ++ ++I PDH VLLAGFPCQPFS AG Sbjct: 145 QVTQPEGLTDDEEIYRAIDAAVPDHQVLLAGFPCQPFSLAG 185 >gi|147668731|ref|YP_001213549.1| DNA-cytosine methyltransferase [Dehalococcoides sp. BAV1] gi|146269679|gb|ABQ16671.1| DNA-cytosine methyltransferase [Dehalococcoides sp. BAV1] Length = 335 Score = 119 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 ++I LF G GG+ L E+ +++E + TYQ NFPNT L I +I Sbjct: 1 MQIISLFSGAGGLDLGFEKA----GFNVVWANEYDKTIWDTYQHNFPNTNLDTRSITEIP 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + +IP D ++ G PCQ +S+AG Sbjct: 57 STEIPTSDGIIGGPPCQSWSEAG 79 >gi|158320884|ref|YP_001513391.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs] gi|158141083|gb|ABW19395.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs] Length = 329 Score = 119 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L E+ + ++E + +TY+ N LI GDI +I + Sbjct: 1 MKLISLFSGAGGMDLGFEKA----GFKVIAANEYDKTIWETYEKNHNAPLIKGDIREIAS 56 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 D P D D ++ G PCQ +S+AG Sbjct: 57 GDFPDDCDGIIGGPPCQSWSEAG 79 >gi|225075681|ref|ZP_03718880.1| hypothetical protein NEIFLAOT_00697 [Neisseria flavescens NRL30031/H210] gi|224952952|gb|EEG34161.1| hypothetical protein NEIFLAOT_00697 [Neisseria flavescens NRL30031/H210] Length = 389 Score = 119 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 KI LF G GG+ L F N + +++EI+ ++V+TY+ N N ++ G Sbjct: 87 YKIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHG 146 Query: 55 DIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 DI + +IP D+++ GFPCQ S G Sbjct: 147 DIWQ-HLDEIPTSADIIIGGFPCQDISING 175 >gi|309809233|ref|ZP_07703103.1| modification methylase HaeIII [Lactobacillus iners SPIN 2503V10-D] gi|308170467|gb|EFO72490.1| modification methylase HaeIII [Lactobacillus iners SPIN 2503V10-D] Length = 340 Score = 119 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L ++ E ++E + KTY+ N LI GDI KI + Sbjct: 1 MKLISLFSGAGGLDLGFKKA----GYEIVVANEFDKTIWKTYEKNNATKLIKGDICKIPS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + P D ++ G PCQ +S+AG Sbjct: 57 DEFPKCDGIIGGPPCQSWSEAG 78 >gi|30089875|ref|NP_839905.1| putative methylase [Lactococcus phage P335 sensu lato] gi|21954664|gb|AAM83053.1|AF489521_14 putative methylase [Lactococcus phage 4268] Length = 185 Score = 119 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 +K DLF GIGG RL LEQ + EC EI+ ++ ++Y+ N + DI + Sbjct: 1 MKFLDLFAGIGGFRLGLEQAGH----ECVGFCEIDKFARQSYKAIHNTEGEREYHDITTV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 ++ +++ GFPCQ FS AG Sbjct: 57 SNEEWRTLRGTVELICGGFPCQAFSIAG 84 >gi|194099965|ref|YP_002003104.1| Modification methylase NgoPII [Neisseria gonorrhoeae NCCP11945] gi|239997973|ref|ZP_04717897.1| Modification methylase NgoPII [Neisseria gonorrhoeae 35/02] gi|240015049|ref|ZP_04721962.1| Modification methylase NgoPII [Neisseria gonorrhoeae DGI18] gi|240017498|ref|ZP_04724038.1| Modification methylase NgoPII [Neisseria gonorrhoeae FA6140] gi|240122118|ref|ZP_04735080.1| Modification methylase NgoPII [Neisseria gonorrhoeae PID24-1] gi|240124411|ref|ZP_04737367.1| Modification methylase NgoPII [Neisseria gonorrhoeae PID332] gi|240124717|ref|ZP_04737603.1| Modification methylase NgoPII [Neisseria gonorrhoeae SK-92-679] gi|254494673|ref|ZP_05107844.1| modification methylase HaeIII [Neisseria gonorrhoeae 1291] gi|260439589|ref|ZP_05793405.1| Modification methylase NgoPII [Neisseria gonorrhoeae DGI2] gi|268599983|ref|ZP_06134150.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae MS11] gi|268602320|ref|ZP_06136487.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae PID18] gi|268683040|ref|ZP_06149902.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae PID332] gi|268683292|ref|ZP_06150154.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae SK-92-679] gi|268687469|ref|ZP_06154331.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|462655|sp|P08455|MTP2_NEIGO RecName: Full=Modification methylase NgoPII; Short=M.NgoPII; AltName: Full=Cytosine-specific methyltransferase NgoPII gi|193935255|gb|ACF31079.1| Modification methylase NgoPII [Neisseria gonorrhoeae NCCP11945] gi|226513713|gb|EEH63058.1| modification methylase HaeIII [Neisseria gonorrhoeae 1291] gi|268584114|gb|EEZ48790.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae MS11] gi|268586451|gb|EEZ51127.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae PID18] gi|268623324|gb|EEZ55724.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae PID332] gi|268623576|gb|EEZ55976.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae SK-92-679] gi|268627753|gb|EEZ60153.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|317165417|gb|ADV08958.1| DcmB [Neisseria gonorrhoeae TCDC-NG08107] Length = 330 Score = 119 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 +KI LF G GG+ L E+ E ++E + T++AN P LI GDI KIK Sbjct: 1 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 +D P + D ++ G PCQ +S+AG Sbjct: 57 EEDFPEEIDGIIGGPPCQSWSEAG 80 >gi|306833678|ref|ZP_07466805.1| DNA (cytosine-5-)-methyltransferase [Streptococcus bovis ATCC 700338] gi|304424448|gb|EFM27587.1| DNA (cytosine-5-)-methyltransferase [Streptococcus bovis ATCC 700338] Length = 451 Score = 119 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A F + + DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGMEA----QGHECLGFCEIDKFARTSYKAIFNTEGEMEYHDIKEV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 D +V+ GFPCQ FS AG Sbjct: 57 TDHDFRQFRGQVEVICGGFPCQAFSLAG 84 >gi|269978372|gb|ACZ55920.1| putative type I restriction-modification system specificity subunit S [Helicobacter pylori] Length = 263 Score = 119 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 KI LF G GG+ L E ++++ +V+TYQ N + +++GDI KI + Sbjct: 10 YKIISLFSGCGGLDLGF----IKEGFEVIWANDFFKEAVETYQKNIGSHIVYGDITKIPS 65 Query: 62 QDIP-DHDVLLAGFPCQPFSQA 82 DIP + DVLL GFPCQ FS A Sbjct: 66 GDIPNECDVLLGGFPCQGFSVA 87 >gi|225076231|ref|ZP_03719430.1| hypothetical protein NEIFLAOT_01268 [Neisseria flavescens NRL30031/H210] gi|224952355|gb|EEG33564.1| hypothetical protein NEIFLAOT_01268 [Neisseria flavescens NRL30031/H210] Length = 374 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 +I LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 17 RILSLFSGCGGLDLGFHQA----GYETVWANDFSHWACESFRKNIGDVIVEGDIEQIDPN 72 Query: 63 D--IPDHDVLLAGFPCQPFSQ 81 D IPD D++L GFPCQ FS Sbjct: 73 DPTIPDCDIILGGFPCQDFSM 93 >gi|315222617|ref|ZP_07864506.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211] gi|315188303|gb|EFU22029.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211] Length = 348 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G GG+ L E+ ++E + +TY+ N LI GDI I + Sbjct: 9 MNLISLFSGAGGLDLGFEKA----GFNVVAANEYDKTIWETYEKNHDTKLIKGDICGIPS 64 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + P D ++ G PCQ +S+AG Sbjct: 65 EMFPKCDGIIGGPPCQSWSEAG 86 >gi|325130663|gb|EGC53404.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304] gi|325134723|gb|EGC57362.1| DNA-cytosine methyltransferase [Neisseria meningitidis M13399] gi|325144843|gb|EGC67131.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240013] gi|325205668|gb|ADZ01121.1| DNA-cytosine methyltransferase [Neisseria meningitidis M04-240196] Length = 316 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 KI LF G GG+ L F N + +++EI+ ++V+TY+ N N ++ G Sbjct: 14 YKIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHG 73 Query: 55 DIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 DI + +IP D+++ GFPCQ S G Sbjct: 74 DIWQY-LDEIPTSADIIIGGFPCQDISING 102 >gi|256958119|ref|ZP_05562290.1| C5 methyltransferase alpha subunit [Enterococcus faecalis DS5] gi|256948615|gb|EEU65247.1| C5 methyltransferase alpha subunit [Enterococcus faecalis DS5] Length = 298 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG RL +E + EC EI+ ++ +Y+A T + DI I Sbjct: 1 MKFLDLFAGIGGFRLGMESAGH----ECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I DV+ GFPCQ FS AG Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83 >gi|325130344|gb|EGC53110.1| modification methylase EcoRII [Neisseria meningitidis OX99.30304] Length = 337 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA-KIK 60 DLF GIGG R+ +E + C FSSE + + +TYQ NF N + +GDI K Sbjct: 20 FTFIDLFAGIGGFRIAME----NVGGRCVFSSEWDDKARQTYQVNF-NDIPYGDITLKET 74 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 IP DVL AGFPCQPFS AG Sbjct: 75 KAAIPSKFDVLTAGFPCQPFSIAG 98 >gi|319638577|ref|ZP_07993339.1| modification methylase NgoFVII [Neisseria mucosa C102] gi|317400326|gb|EFV80985.1| modification methylase NgoFVII [Neisseria mucosa C102] Length = 374 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 +I LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 17 RILSLFSGCGGLDLGFHQA----GYETVWANDFSHWACESFRKNIGDVIVEGDIEQIDPN 72 Query: 63 D--IPDHDVLLAGFPCQPFSQ 81 D IPD D++L GFPCQ FS Sbjct: 73 DPTIPDCDIILGGFPCQDFSM 93 >gi|304387412|ref|ZP_07369603.1| modification methylase EcoRII [Neisseria meningitidis ATCC 13091] gi|304338505|gb|EFM04624.1| modification methylase EcoRII [Neisseria meningitidis ATCC 13091] Length = 336 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA-KIK 60 DLF GIGG R+ +E + C FSSE + + +TYQ NF N + +GDI K Sbjct: 20 FTFIDLFAGIGGFRIAME----NVGGRCVFSSEWDDKARQTYQVNF-NDIPYGDITLKET 74 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 IP DVL AGFPCQPFS AG Sbjct: 75 KAAIPSKFDVLTAGFPCQPFSIAG 98 >gi|254805366|ref|YP_003083587.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|254668908|emb|CBA07091.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|308389730|gb|ADO32050.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha710] Length = 389 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 KI LF G GG+ L F N + +++EI+ ++V+TY+ N N ++ G Sbjct: 87 YKIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHG 146 Query: 55 DIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 DI + +IP D+++ GFPCQ S G Sbjct: 147 DIWQY-LDEIPTSADIIIGGFPCQDISING 175 >gi|15677157|ref|NP_274310.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis MC58] gi|161870164|ref|YP_001599334.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis 053442] gi|218768314|ref|YP_002342826.1| putative modification methylase [Neisseria meningitidis Z2491] gi|7226530|gb|AAF41666.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis MC58] gi|121052322|emb|CAM08652.1| putative modification methylase [Neisseria meningitidis Z2491] gi|161595717|gb|ABX73377.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis 053442] gi|254670478|emb|CBA06174.1| putative DNA modification methylase [Neisseria meningitidis alpha153] gi|308389411|gb|ADO31731.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis alpha710] gi|316984080|gb|EFV63058.1| modification methylase SsoII [Neisseria meningitidis H44/76] gi|319410559|emb|CBY90927.1| putative type II restriction-modification system enzyme Mod [Neisseria meningitidis WUE 2594] gi|325134466|gb|EGC57111.1| modification methylase EcoRII [Neisseria meningitidis M13399] gi|325136204|gb|EGC58812.1| modification methylase EcoRII [Neisseria meningitidis M0579] gi|325140483|gb|EGC63004.1| modification methylase EcoRII [Neisseria meningitidis CU385] gi|325144567|gb|EGC66866.1| modification methylase EcoRII [Neisseria meningitidis M01-240013] gi|325200082|gb|ADY95537.1| modification methylase EcoRII [Neisseria meningitidis H44/76] gi|325201996|gb|ADY97450.1| modification methylase EcoRII [Neisseria meningitidis M01-240149] gi|325205934|gb|ADZ01387.1| modification methylase EcoRII [Neisseria meningitidis M04-240196] gi|325208252|gb|ADZ03704.1| modification methylase EcoRII [Neisseria meningitidis NZ-05/33] Length = 337 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA-KIK 60 DLF GIGG R+ +E + C FSSE + + +TYQ NF N + +GDI K Sbjct: 20 FTFIDLFAGIGGFRIAME----NVGGRCVFSSEWDDKARQTYQVNF-NDIPYGDITLKET 74 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 IP DVL AGFPCQPFS AG Sbjct: 75 KAAIPSKFDVLTAGFPCQPFSIAG 98 >gi|121635255|ref|YP_975500.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis FAM18] gi|313668027|ref|YP_004048311.1| C-5 cytosine-specific DNA methylase [Neisseria lactamica ST-640] gi|120866961|emb|CAM10721.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis FAM18] gi|313005489|emb|CBN86924.1| C-5 cytosine-specific DNA methylase [Neisseria lactamica 020-06] Length = 383 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 KI LF G GG+ L F N + +++EI+ ++V+TY+ N N ++ G Sbjct: 81 YKIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHG 140 Query: 55 DIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 DI + +IP D+++ GFPCQ S G Sbjct: 141 DIWQ-HLDEIPTSADIIIGGFPCQDISING 169 >gi|317048624|ref|YP_004116272.1| DNA-cytosine methyltransferase [Pantoea sp. At-9b] gi|316950241|gb|ADU69716.1| DNA-cytosine methyltransferase [Pantoea sp. At-9b] Length = 467 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 43/101 (42%), Positives = 52/101 (51%), Gaps = 23/101 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR EQ +C F+SE N +V+TY+AN P F DI Sbjct: 93 FQFVDLFAGIGGIRRGFEQ----IGGQCVFTSEWNKEAVRTYKANHYCDPQQHRFNSDIR 148 Query: 58 KIK---------------TQDIPDHDVLLAGFPCQPFSQAG 83 ++ + IPDH VLLAGFPCQPFS AG Sbjct: 149 QVTQPAGLHDEQAIYQHIDRTIPDHQVLLAGFPCQPFSLAG 189 >gi|329298618|ref|ZP_08255954.1| DNA cytosine methylase [Plautia stali symbiont] Length = 465 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 45/101 (44%), Positives = 51/101 (50%), Gaps = 23/101 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR EQ +C F+SE N +V+TY+AN P F DI Sbjct: 91 FQFIDLFAGIGGIRRGFEQ----IGGQCVFTSEWNKEAVRTYKANHYSDPAQHQFNSDIR 146 Query: 58 KIK---------------TQDIPDHDVLLAGFPCQPFSQAG 83 I Q IPDH VLLAGFPCQPFS AG Sbjct: 147 LITQPAGLPDEQAIYQHIDQTIPDHQVLLAGFPCQPFSLAG 187 >gi|229187780|ref|ZP_04314910.1| Cytosine-specific methyltransferase [Bacillus cereus BGSC 6E1] gi|228595683|gb|EEK53373.1| Cytosine-specific methyltransferase [Bacillus cereus BGSC 6E1] Length = 365 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 L DLF GIGG RL +E + +C EI+ ++ K+Y+ N DI + Sbjct: 3 LTFIDLFAGIGGFRLGMEAAGH----KCLGYVEIDKFARKSYEAIHNTKGEWTAHDITTV 58 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 D+ DV+ GFPCQ FS AG Sbjct: 59 TNDDLRLLRGTVDVICGGFPCQAFSIAG 86 >gi|67922277|ref|ZP_00515790.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67855853|gb|EAM51099.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 226 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 8/89 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE-------CFFSSEINPYSVKTYQANFPNTLIFG 54 LK DLFCGIGG R+ LE +H + C FSS+I+ + K Y+ANF + G Sbjct: 16 LKYIDLFCGIGGFRIALELVCSHYKFKEHKIKPICVFSSDIDADAQKNYEANFKDKPQ-G 74 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI +I + IP+H++LLAGFPCQ FS G Sbjct: 75 DITQIPVELIPNHNLLLAGFPCQTFSICG 103 >gi|312873586|ref|ZP_07733633.1| modification methylase BanI [Lactobacillus iners LEAF 2052A-d] gi|311090839|gb|EFQ49236.1| modification methylase BanI [Lactobacillus iners LEAF 2052A-d] Length = 487 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 3/84 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 + DLF G+GGIRL E+ +C FSS+I ++ Y+ NF DI KI Sbjct: 70 ITYIDLFSGLGGIRLGFEEALTDYGLTGKCVFSSDIKESAITAYKTNFGENPKC-DITKI 128 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 ++P+ D LLAGFPCQ FSQAG Sbjct: 129 NPTNLPNFDFLLAGFPCQAFSQAG 152 >gi|167854713|ref|ZP_02477492.1| cell division protein MukB [Haemophilus parasuis 29755] gi|167854127|gb|EDS25362.1| cell division protein MukB [Haemophilus parasuis 29755] Length = 361 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA-KIK 60 DLF GIGG RL +E+ + C FSSEI+ + KTY NF +GDI + Sbjct: 37 FTFIDLFAGIGGFRLAMEKLGGY----CVFSSEIDENAQKTYATNFGEKP-YGDITLEET 91 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 + IP D+L AGFPCQ FS AG Sbjct: 92 KRLIPTTFDILCAGFPCQAFSIAG 115 >gi|169829195|ref|YP_001699353.1| modification methylase SPRI [Lysinibacillus sphaericus C3-41] gi|168993683|gb|ACA41223.1| Modification methylase SPRI [Lysinibacillus sphaericus C3-41] Length = 418 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 ++ D F GIGG RL +EQ + C E + ++ K+Y+ N DI + Sbjct: 1 MQFLDFFAGIGGFRLGMEQAGH----TCAGYVEWDKFARKSYEAIHNTEGEWTAHDITTV 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 ++ D++ GFPCQ FS AG Sbjct: 57 SDEEFSKFRGTVDIICGGFPCQAFSVAG 84 >gi|197302809|ref|ZP_03167861.1| hypothetical protein RUMLAC_01538 [Ruminococcus lactaris ATCC 29176] gi|197298046|gb|EDY32594.1| hypothetical protein RUMLAC_01538 [Ruminococcus lactaris ATCC 29176] Length = 333 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 5/80 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 DLF G+GG R+ LE +C +S+E N K Y NF + + GDI ++ Sbjct: 14 FIDLFAGLGGFRIALES----LGAKCVYSNEWNVPVQKVYADNFGD-IPEGDITQVDENT 68 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQ FS +G Sbjct: 69 IPDHDILCAGFPCQAFSISG 88 >gi|294787738|ref|ZP_06752982.1| modification methylase NgoPII [Simonsiella muelleri ATCC 29453] gi|294484031|gb|EFG31714.1| modification methylase NgoPII [Simonsiella muelleri ATCC 29453] Length = 331 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF G GG+ L E+ E ++E + TY+AN P T LI GDI I+ Sbjct: 1 MKVISLFSGCGGLDLGFERA----GFEIPVANEYDKTIWATYKANHPKTQLIEGDIRHIQ 56 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 + PD D ++ G PCQ +S+AG Sbjct: 57 EINFPDEIDGIIGGPPCQSWSEAG 80 >gi|154504826|ref|ZP_02041564.1| hypothetical protein RUMGNA_02336 [Ruminococcus gnavus ATCC 29149] gi|153794709|gb|EDN77129.1| hypothetical protein RUMGNA_02336 [Ruminococcus gnavus ATCC 29149] Length = 422 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 + DL GIGG RL LE + +C E + ++ +Y+A + D+ K+ Sbjct: 4 MTFLDLCSGIGGFRLGLETAGH----KCIGYCEYDKFARASYEAMYDTEGEWKAHDVTKL 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K +D+P D+ GFPCQ S AG Sbjct: 60 KPEDVPYADIWCFGFPCQDISVAG 83 >gi|168335325|ref|ZP_02693422.1| DNA-cytosine methyltransferase [Epulopiscium sp. 'N.t. morphotype B'] Length = 324 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ LF G GG+ L E+ E ++E + TY+ N LI GDI+KI + Sbjct: 1 MRLISLFAGAGGLDLGFEKA----GYEIAAANEYDKTIWATYEKNHKGPLIKGDISKIPS 56 Query: 62 QDIPD-HDVLLAGFPCQPFSQAG 83 D PD D ++ G PCQ +S AG Sbjct: 57 ADFPDGIDGIIGGPPCQSWSAAG 79 >gi|160947479|ref|ZP_02094646.1| hypothetical protein PEPMIC_01413 [Parvimonas micra ATCC 33270] gi|158446613|gb|EDP23608.1| hypothetical protein PEPMIC_01413 [Parvimonas micra ATCC 33270] Length = 348 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G GG+ L E+ ++E + +TY+ N LI GDI I + Sbjct: 9 MNLVSLFSGAGGLDLGFERA----GFNIVVANEYDKTIWETYEKNHKTKLIKGDICGIPS 64 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 P D ++ G PCQ +S+AG Sbjct: 65 DMFPKCDGIIGGPPCQSWSEAG 86 >gi|257882475|ref|ZP_05662128.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,502] gi|294620467|ref|ZP_06699776.1| methyl transferase [Enterococcus faecium E1679] gi|294623872|ref|ZP_06702700.1| methyl transferase [Enterococcus faecium U0317] gi|257818133|gb|EEV45461.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,502] gi|291593380|gb|EFF24945.1| methyl transferase [Enterococcus faecium E1679] gi|291596826|gb|EFF28049.1| methyl transferase [Enterococcus faecium U0317] Length = 380 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 + DLF GIGG RL +EQ + +C EI+ ++ ++Y+A + DI + Sbjct: 1 MTFLDLFAGIGGFRLGMEQAGH----QCIGFCEIDEFARRSYKAIHDTRKEVEMHDITSV 56 Query: 60 KTQ---DIPDHDVLLAGFPCQPFSQAG 83 + + D+L GFPCQ FS AG Sbjct: 57 SDEFVRSLGPVDILCGGFPCQAFSIAG 83 >gi|261379604|ref|ZP_05984177.1| modification methylase EcoRII [Neisseria subflava NJ9703] gi|284798084|gb|EFC53431.1| modification methylase EcoRII [Neisseria subflava NJ9703] Length = 320 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGG L++ +C F+SE + + KTY+ N N GDI K + Sbjct: 6 FTFIDLFAGIGGFHFALKELRG----KCVFASEWDKNAQKTYEVNH-NLKPLGDITKQEI 60 Query: 62 QD-IPD-HDVLLAGFPCQPFSQAG 83 +D IP+ D+L AGFPCQ FS AG Sbjct: 61 KDQIPEKFDILCAGFPCQAFSIAG 84 >gi|238793797|ref|ZP_04637418.1| Cytosine-specific methyltransferase [Yersinia intermedia ATCC 29909] gi|238726861|gb|EEQ18394.1| Cytosine-specific methyltransferase [Yersinia intermedia ATCC 29909] Length = 365 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 K+ LF G GG+ L F+ N E +++E NP +VKTY+ NF + ++ G Sbjct: 60 YKLISLFSGCGGMDLGFCGNFSFLNKEYKKTKFEIIWANEFNPNAVKTYKKNFSHNIVEG 119 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI ++ + DVL+ GFPCQ S G Sbjct: 120 DIWELIDSVPTECDVLIGGFPCQDISING 148 >gi|293371777|ref|ZP_06618187.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f] gi|292633229|gb|EFF51800.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f] Length = 459 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +K+ F G GG+ L EQ E +++E + +TYQ N PNT + DI +K Sbjct: 1 MKVASFFAGCGGLDLGFEQA----GYEVIWANEFDEGIHETYQFNHPNTYLCKSDIRTLK 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD D + G PCQ +S+ G Sbjct: 57 AADIPDCDGFIGGPPCQSWSEGG 79 >gi|332162719|ref|YP_004299296.1| Cytosine-specific methyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666949|gb|ADZ43593.1| Cytosine-specific methyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859459|emb|CBX69803.1| hypothetical protein YEW_FM23370 [Yersinia enterocolitica W22703] Length = 365 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDL-------EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 K+ LF G GG+ L + + E +++E NP +VKTY+ NF + ++ G Sbjct: 60 YKLISLFSGCGGMDLGFCGDFSVLNKKYKKTKFEIIWANEFNPNAVKTYKKNFSHNIVEG 119 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI ++ + DVL+ GFPCQ S G Sbjct: 120 DIWELIDSVPTECDVLIGGFPCQDISING 148 >gi|294673665|ref|YP_003574281.1| prophage PRU01 DNA methylase, C-5 cytosine-specific family [Prevotella ruminicola 23] gi|294471747|gb|ADE81136.1| prophage PRU01, DNA methylase, C-5 cytosine-specific family [Prevotella ruminicola 23] Length = 330 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF G GG+ L E+ E ++E +P +T++AN P T LI GDI IK Sbjct: 1 MKVISLFSGCGGLDLGFERA----GFEVPVANEFDPSIWETFEANHPKTKLIRGDIRNIK 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 D P D D ++ G PCQ +S+AG Sbjct: 57 ESDFPKDVDGIIGGPPCQSWSEAG 80 >gi|325298663|ref|YP_004258580.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] gi|324318216|gb|ADY36107.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] Length = 463 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +K+ F G GG+ L EQ +E ++++I +TYQ N PNT++ DI ++ Sbjct: 1 MKVASFFSGCGGLDLGFEQA----GIEVIWANDIEASIHETYQYNHPNTILCKSDIRELH 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD D + G PCQ +S+ G Sbjct: 57 ASDIPDCDGFIGGPPCQSWSEGG 79 >gi|302873674|ref|YP_003842307.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|307686602|ref|ZP_07629048.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|302576531|gb|ADL50543.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] Length = 448 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 + D GIGG RL LE T + +C E + ++VK+Y+A F DI ++ Sbjct: 4 MTFLDFCAGIGGFRLGLELTGH----KCIGFCEKDKFAVKSYKAMFETEGEWYANDITEL 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K+ +IP D+ GFPCQ S AG Sbjct: 60 KSDEIPYADIWCFGFPCQDISVAG 83 >gi|220903553|ref|YP_002478865.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867852|gb|ACL48187.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 308 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG+ L + + +++++ +VKTY+ N + ++ DI+++ T Sbjct: 1 MKVVSLFSGAGGLDLGFKMAGHS----IIWANDVYEDAVKTYRMNIGDHILCKDISQVTT 56 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 ++PD D+++ GFPCQ FS A Sbjct: 57 AEVPDSDIIIGGFPCQGFSVA 77 >gi|331085742|ref|ZP_08334825.1| hypothetical protein HMPREF0987_01128 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406665|gb|EGG86170.1| hypothetical protein HMPREF0987_01128 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 425 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 L DL GIGG RL LE + +C E + ++ +Y+A + D+ K+ Sbjct: 4 LTFLDLCSGIGGFRLGLESAGH----KCVGYCEYDKFARASYEAMYDTEGEWKADDVTKL 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K D+P D+ GFPCQ S AG Sbjct: 60 KPSDVPRADIWCFGFPCQDISVAG 83 >gi|328947436|ref|YP_004364773.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447760|gb|AEB13476.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 439 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGG RL ++ +C FSSE + + +TY N+ FGDI K + Sbjct: 96 FTFIDLFAGIGGFRLAMQSC----GGQCVFSSEWDDAAKQTYFENYGEVP-FGDITKTEI 150 Query: 62 QD-IP-DHDVLLAGFPCQPFSQAG 83 +D IP DVL AGFPCQPFS +G Sbjct: 151 KDLIPKKFDVLCAGFPCQPFSYSG 174 >gi|18466581|ref|NP_569389.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|160431784|ref|YP_001551898.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Choleraesuis] gi|16505897|emb|CAD09776.1| putative DNA modification methylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|159885325|dbj|BAF92929.1| putative DNA modification methylase [Salmonella enterica subsp. enterica serovar Choleraesuis] Length = 475 Score = 117 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57 + DLF GIGG+R + +C F+SE N +S +TY AN+ DI Sbjct: 92 FRFIDLFAGIGGLRSGFDA----IGGKCVFTSEWNQFSRRTYSANWYCDETEHYFNSDIR 147 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I IPDHDVLLAGFPCQPFS AG Sbjct: 148 DITLSNLPDVSDDQAYASIDASIPDHDVLLAGFPCQPFSIAG 189 >gi|225076313|ref|ZP_03719512.1| hypothetical protein NEIFLAOT_01354 [Neisseria flavescens NRL30031/H210] gi|224952437|gb|EEG33646.1| hypothetical protein NEIFLAOT_01354 [Neisseria flavescens NRL30031/H210] Length = 359 Score = 117 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGG R+ ++ +C FSSE + + +TY ANF + FGDI +T Sbjct: 37 FTFIDLFAGIGGFRIAMQS----LGGKCLFSSEWDDKAQQTYAANFG-EIPFGDITTEET 91 Query: 62 Q-DIP-DHDVLLAGFPCQPFSQAG 83 + IP + D+L AGFPCQ FS AG Sbjct: 92 KSHIPKEFDILCAGFPCQAFSIAG 115 >gi|260752101|ref|YP_003237616.1| putative DNA modification methylase [Escherichia coli O111:H- str. 11128] gi|257767571|dbj|BAI39065.1| putative DNA modification methylase [Escherichia coli O111:H- str. 11128] Length = 475 Score = 117 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57 + DLF GIGG+R + +C F+SE N +S +TY AN+ DI Sbjct: 92 FRFIDLFAGIGGLRSGFDA----IGGKCVFTSEWNQFSRRTYSANWYCDETEHYFNSDIR 147 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I IPDHDVLLAGFPCQPFS AG Sbjct: 148 DITLSNLPDVSDDQAYASIDASIPDHDVLLAGFPCQPFSIAG 189 >gi|160931938|ref|ZP_02079330.1| hypothetical protein CLOLEP_00771 [Clostridium leptum DSM 753] gi|156868980|gb|EDO62352.1| hypothetical protein CLOLEP_00771 [Clostridium leptum DSM 753] Length = 379 Score = 117 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 ++ DLF GIGG R L Q C EI+ ++ ++Y+A F DI K Sbjct: 6 IRYLDLFSGIGGFREGLTQAG---GFTCAGHCEIDQHADRSYRALFDTEGEWFCDDIRKA 62 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +++PD ++L GFPCQ FS AG Sbjct: 63 DPEELPDVELLCGGFPCQAFSIAG 86 >gi|218133430|ref|ZP_03462234.1| hypothetical protein BACPEC_01295 [Bacteroides pectinophilus ATCC 43243] gi|217990805|gb|EEC56811.1| hypothetical protein BACPEC_01295 [Bacteroides pectinophilus ATCC 43243] Length = 320 Score = 117 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 + DL GIGG RL LE + +C E + ++ +Y+A + D+ K+ Sbjct: 4 MTFLDLCSGIGGFRLGLETAGH----KCIGYCEYDKFARASYEAMYDTEGEWKAHDVTKL 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K +D+P D+ GFPCQ S AG Sbjct: 60 KPEDVPYADIWCFGFPCQDISVAG 83 >gi|161869727|ref|YP_001598894.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria meningitidis 053442] gi|161595280|gb|ABX72940.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria meningitidis 053442] Length = 374 Score = 117 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 17 KILSLFSGCGGLDLGFHQA----GYETVWANDFSHWACESFRKNIGDVIVEGDIEQIDPN 72 Query: 63 D--IPDHDVLLAGFPCQPFSQ 81 + IPD D++L GFPCQ FS Sbjct: 73 NPTIPDCDIILGGFPCQDFSM 93 >gi|306824635|ref|ZP_07457980.1| DNA methylase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433203|gb|EFM36174.1| DNA methylase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 410 Score = 117 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 I F G+GGI L EQT +++E + Y+ +TYQ N P+T + G DI ++ Sbjct: 13 YNIAAFFSGVGGIELGFEQTNE---FRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQ 69 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 +DIP D+++ GFPCQ FS AG Sbjct: 70 PEDIPVERVDIIMGGFPCQAFSIAG 94 >gi|170718749|ref|YP_001783936.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] gi|168826878|gb|ACA32249.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] Length = 372 Score = 117 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 16 KILSLFSGCGGLDLGFHQA----GYETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 71 Query: 63 D--IPDHDVLLAGFPCQPFSQ 81 D IPD D++L GFPCQ FS Sbjct: 72 DPTIPDCDIILGGFPCQDFSM 92 >gi|240117500|ref|ZP_04731562.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae PID1] gi|268603200|ref|ZP_06137367.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID1] gi|268587331|gb|EEZ52007.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID1] Length = 374 Score = 117 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 17 KILSLFSGCGGLDLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 72 Query: 63 D--IPDHDVLLAGFPCQPFSQ 81 D IPD D++L GFPCQ FS Sbjct: 73 DPTIPDCDIILGGFPCQDFSM 93 >gi|169823657|ref|YP_001691160.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328] gi|167832277|dbj|BAG09192.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328] Length = 332 Score = 117 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 6/83 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT 61 K+ LF G+GGI + E+ E +++EI+ + +TY+ NFP + DI ++ Sbjct: 4 KVISLFAGVGGIDIGFEKA----GFETIYANEIDEKARQTYKLNFPEVFLDSRDIRDVQK 59 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 DIP + V+++GFPCQ FS AG Sbjct: 60 DDIPHEASVVVSGFPCQSFSIAG 82 >gi|59800809|ref|YP_207521.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA 1090] gi|254493277|ref|ZP_05106448.1| modification methylase NgoFVII [Neisseria gonorrhoeae 1291] gi|260440968|ref|ZP_05794784.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae DGI2] gi|268594414|ref|ZP_06128581.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae 35/02] gi|268596411|ref|ZP_06130578.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA19] gi|268598542|ref|ZP_06132709.1| modification methylase NgoFVII [Neisseria gonorrhoeae MS11] gi|268600894|ref|ZP_06135061.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID18] gi|268681681|ref|ZP_06148543.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID332] gi|268683908|ref|ZP_06150770.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-92-679] gi|291044296|ref|ZP_06570005.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae DGI2] gi|293399487|ref|ZP_06643640.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|59717704|gb|AAW89109.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA 1090] gi|226512317|gb|EEH61662.1| modification methylase NgoFVII [Neisseria gonorrhoeae 1291] gi|268547803|gb|EEZ43221.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae 35/02] gi|268550199|gb|EEZ45218.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA19] gi|268582673|gb|EEZ47349.1| modification methylase NgoFVII [Neisseria gonorrhoeae MS11] gi|268585025|gb|EEZ49701.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID18] gi|268621965|gb|EEZ54365.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID332] gi|268624192|gb|EEZ56592.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-92-679] gi|291011190|gb|EFE03186.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae DGI2] gi|291610056|gb|EFF39178.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] Length = 374 Score = 117 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 17 KILSLFSGCGGLDLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 72 Query: 63 D--IPDHDVLLAGFPCQPFSQ 81 D IPD D++L GFPCQ FS Sbjct: 73 DPTIPDCDIILGGFPCQDFSM 93 >gi|313651376|gb|EFS15772.1| modification methylase EcoRII [Shigella flexneri 2a str. 2457T] Length = 463 Score = 117 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57 + DLF GIGG+R + +C F+SE N +S +TY AN+ DI Sbjct: 80 FRFIDLFAGIGGLRSGFDA----IGGKCVFTSEWNQFSRRTYSANWYCDETEHYFNSDIR 135 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I IPDHDVLLAGFPCQPFS AG Sbjct: 136 DITLSNLPDVSDDQAYASIDASIPDHDVLLAGFPCQPFSIAG 177 >gi|268686152|ref|ZP_06153014.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-93-1035] gi|268626436|gb|EEZ58836.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-93-1035] Length = 374 Score = 117 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 17 KILSLFSGCGGLDLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 72 Query: 63 D--IPDHDVLLAGFPCQPFSQ 81 D IPD D++L GFPCQ FS Sbjct: 73 DPTIPDCDIILGGFPCQDFSM 93 >gi|11386930|sp|Q59606|MTF7_NEIGO RecName: Full=Modification methylase NgoFVII; Short=M.NgoFVII; AltName: Full=Cytosine-specific methyltransferase NgoFVII; Short=M.NgoVII gi|1165245|gb|AAA86270.1| M.NgoVII [Neisseria gonorrhoeae] Length = 374 Score = 117 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 17 KILSLFSGCGGLDLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 72 Query: 63 D--IPDHDVLLAGFPCQPFSQ 81 D IPD D++L GFPCQ FS Sbjct: 73 DPTIPDCDIILGGFPCQDFSM 93 >gi|282859944|ref|ZP_06269032.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010] gi|282587347|gb|EFB92564.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010] Length = 448 Score = 117 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGG R+ ++ + C FSSE + + KTY N+ FGDI + +T Sbjct: 114 FTFIDLFAGIGGFRMAMQ----NLGGRCVFSSEWDIQAQKTYFLNYGEVP-FGDITQERT 168 Query: 62 QD-IPDH-DVLLAGFPCQPFSQAG 83 + IPDH D+L AGFPCQ FS AG Sbjct: 169 KAYIPDHFDILCAGFPCQAFSLAG 192 >gi|317480905|ref|ZP_07939986.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36] gi|316902990|gb|EFV24863.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36] Length = 441 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 39/83 (46%), Positives = 49/83 (59%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF G+GG L LE+ EC F+SEI Y+ N + GDI ++ Sbjct: 4 LKFIDLFAGLGGFHLALEK----LGCECVFASEIQTELRTLYERNHG-IICHGDINEVDI 58 Query: 62 Q-DIPDHDVLLAGFPCQPFSQAG 83 + DIP+HD+L GFPCQPFSQAG Sbjct: 59 EKDIPEHDILCGGFPCQPFSQAG 81 >gi|322392562|ref|ZP_08066022.1| DNA methylase [Streptococcus peroris ATCC 700780] gi|321144554|gb|EFX39955.1| DNA methylase [Streptococcus peroris ATCC 700780] Length = 406 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 I F G+GGI L EQT +++E + Y+ +TYQ N P+T + G DI ++ Sbjct: 13 YNIAAFFSGVGGIELGFEQTNE---FRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQ 69 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 +DIP DV++ GFPCQ FS AG Sbjct: 70 PEDIPAERVDVIMGGFPCQAFSIAG 94 >gi|153939897|ref|YP_001391385.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum F str. Langeland] gi|152935793|gb|ABS41291.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum F str. Langeland] gi|295319412|gb|ADF99789.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum F str. 230613] Length = 547 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 35/86 (40%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M KI DLF G GG+ L E T E E N + KTY N N + DI K+ Sbjct: 1 MYKIVDLFAGAGGLSLGFEMT---EKFEIVAFVENNKNAAKTYLKNHSNIKNYEDILKLD 57 Query: 61 TQDI----PDHDVLLAGFPCQPFSQA 82 DI P+ DV++ G PCQ FS A Sbjct: 58 FNDILSSNPNIDVVIGGPPCQGFSNA 83 >gi|119511452|ref|ZP_01630563.1| modification methylase NlaIV [Nodularia spumigena CCY9414] gi|119463917|gb|EAW44843.1| modification methylase NlaIV [Nodularia spumigena CCY9414] Length = 433 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 53/84 (63%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ++ DLF GIGGIRL EQ N N+ EC SSEIN + Y+ NF N GD+ I Sbjct: 4 IRFVDLFSGIGGIRLAFEQAANSLNIESECVLSSEINTDAQFVYETNF-NHKSLGDVRLI 62 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +P+H+VLLAGFPCQ FS AG Sbjct: 63 --EKLPEHEVLLAGFPCQSFSHAG 84 >gi|256819720|ref|YP_003140999.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271] gi|256581303|gb|ACU92438.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271] Length = 389 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DLF GIGG L ++ H + SEI+ +++ Y+ NFPN GDI + Sbjct: 1 MKLIDLFSGIGGFSLGFQRAGYHFTEH--YFSEIDKHAIANYKNNFPNAKYIGDITTLHG 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D D++ G PCQ FS AG Sbjct: 59 GDFTGIDIITFGSPCQDFSLAG 80 >gi|332362221|gb|EGJ40021.1| DNA methylase [Streptococcus sanguinis SK1056] Length = 412 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 I F G+GGI L EQT +++E + Y+ +TYQ N P+T + G DI ++ Sbjct: 19 YNIAAFFSGVGGIELGFEQTNE---FRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQ 75 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 +DIP DV++ GFPCQ FS AG Sbjct: 76 PEDIPAERVDVIMGGFPCQAFSIAG 100 >gi|149373126|ref|ZP_01892014.1| DcmB [unidentified eubacterium SCB49] gi|149354274|gb|EDM42843.1| DcmB [unidentified eubacterium SCB49] Length = 349 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 +KI F G GG+ L +Q +++E + +TY+ N PNT++ I I Sbjct: 1 MKIVSFFAGAGGLDLGFQQA----GFNVIWANEYDKEIWETYEKNHPNTILDKRSIVNIP 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++P+ D ++ G PCQ +S+AG Sbjct: 57 ADEVPECDGIIGGPPCQSWSEAG 79 >gi|331084584|ref|ZP_08333682.1| hypothetical protein HMPREF0992_02606 [Lachnospiraceae bacterium 6_1_63FAA] gi|330400654|gb|EGG80261.1| hypothetical protein HMPREF0992_02606 [Lachnospiraceae bacterium 6_1_63FAA] Length = 324 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M K F G+GGI E T + +++EI+ Y +T++ NF + DI ++K Sbjct: 1 MFKCASFFAGVGGIDYGFESTGV---FKTVYANEIDSYPAQTFELNFDVKVDVRDIHEVK 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +++IPD D++LAGFPCQ FS AG Sbjct: 58 SEEIPDFDIMLAGFPCQAFSIAG 80 >gi|260913722|ref|ZP_05920198.1| modification methylase NgoPII [Pasteurella dagmatis ATCC 43325] gi|260632261|gb|EEX50436.1| modification methylase NgoPII [Pasteurella dagmatis ATCC 43325] Length = 329 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF G GG+ L E+ E ++E + T++AN P T LI GDI IK Sbjct: 1 MKVISLFSGCGGLDLGFEKA----GFEIPVANEYDKTIWATFKANHPKTKLIEGDIRSIK 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 D P + D ++ G PCQ +S+AG Sbjct: 57 EDDFPNEIDGIIGGPPCQSWSEAG 80 >gi|262283530|ref|ZP_06061296.1| cytosine-specific methyltransferase NlaX [Streptococcus sp. 2_1_36FAA] gi|262261021|gb|EEY79721.1| cytosine-specific methyltransferase NlaX [Streptococcus sp. 2_1_36FAA] Length = 411 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 +K DLF GIGG R +E + EC E++ ++ K+Y+A F + DI + Sbjct: 1 MKFLDLFSGIGGFRFGMEAAGH----ECIGFCEVDVFARKSYKAIFNTEKEVELHDIRSV 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 + I D+L GFPCQ FS AG Sbjct: 57 PDESIRGLGQVDILCGGFPCQSFSLAG 83 >gi|288904476|ref|YP_003429697.1| DNA methylase [Streptococcus gallolyticus UCN34] gi|288731201|emb|CBI12749.1| Putative DNA methylase [Streptococcus gallolyticus UCN34] Length = 366 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K DLF GIGG R+ LE + C EI+P++ +Y+ + + F DI + Sbjct: 1 MKFFDLFAGIGGFRMGLESLGH----RCVGFCEIDPFARASYKVIYDTEGDIEFHDIRNV 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQAG 83 T I D++ GFPCQ FS AG Sbjct: 57 TTDAIRGIGRVDIICGGFPCQAFSIAG 83 >gi|227357019|ref|ZP_03841390.1| DNA-cytosine methyltransferase [Proteus mirabilis ATCC 29906] gi|261345118|ref|ZP_05972762.1| DNA (cytosine-5-)-methyltransferase [Providencia rustigianii DSM 4541] gi|227162822|gb|EEI47782.1| DNA-cytosine methyltransferase [Proteus mirabilis ATCC 29906] gi|282566805|gb|EFB72340.1| DNA (cytosine-5-)-methyltransferase [Providencia rustigianii DSM 4541] Length = 301 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K++ F GIGG L LE++ + F EIN + N+P+ ++ DI +K Sbjct: 9 YKVSSFFAGIGGFDLGLERS----GMNVVFQCEINKFCQSVLNKNWPDIPLYTDITNLKA 64 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 DIPD +V GFPCQ S A Sbjct: 65 NDIPDSNVWCGGFPCQDVSSA 85 >gi|315580106|gb|EFU92297.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0309A] Length = 382 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 + DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + + DI + Sbjct: 1 MTFLDLFAGIGGFRLGMEQAGHH----CIGFCEIDDFARRSYKAIYDTSEEVEMYDITSV 56 Query: 60 KTQDIPD---HDVLLAGFPCQPFSQAG 83 + I D+L GFPCQ FS AG Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83 >gi|315574420|gb|EFU86611.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0309B] Length = 386 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 + DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + + DI + Sbjct: 5 MTFLDLFAGIGGFRLGMEQAGHH----CIGFCEIDDFARRSYKAIYDTSEEVEMYDITSV 60 Query: 60 KTQDIPD---HDVLLAGFPCQPFSQAG 83 + I D+L GFPCQ FS AG Sbjct: 61 SDEFIQSLGPVDILCGGFPCQAFSIAG 87 >gi|227553877|ref|ZP_03983924.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis HH22] gi|307285310|ref|ZP_07565454.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0860] gi|227176989|gb|EEI57961.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis HH22] gi|306502887|gb|EFM72149.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0860] Length = 380 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 + DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + + DI + Sbjct: 1 MTFLDLFAGIGGFRLGMEQAGHH----CIGFCEIDDFARRSYKAIYDTSEEVEMYDITSV 56 Query: 60 KTQDIPD---HDVLLAGFPCQPFSQAG 83 + I D+L GFPCQ FS AG Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83 >gi|153814253|ref|ZP_01966921.1| hypothetical protein RUMTOR_00462 [Ruminococcus torques ATCC 27756] gi|145848649|gb|EDK25567.1| hypothetical protein RUMTOR_00462 [Ruminococcus torques ATCC 27756] Length = 422 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 + DL GIGG RL LE + +C E + ++ +Y+A + D+ K+ Sbjct: 4 MTFLDLCSGIGGFRLGLETAGH----KCIGYCEYDKFARASYEAMYDTEGEWKAHDVTKL 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K D+P D+ GFPCQ S AG Sbjct: 60 KPGDVPYADIWCFGFPCQDISVAG 83 >gi|227517066|ref|ZP_03947115.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0104] gi|255975250|ref|ZP_05425836.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T2] gi|227075490|gb|EEI13453.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0104] gi|255968122|gb|EET98744.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T2] Length = 384 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 + DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + + DI + Sbjct: 5 MTFLDLFAGIGGFRLGMEQAGHH----CIGFCEIDDFARRSYKAIYDTSEEVEMYDITSV 60 Query: 60 KTQDIPD---HDVLLAGFPCQPFSQAG 83 + I D+L GFPCQ FS AG Sbjct: 61 SDEFIQSLGPVDILCGGFPCQAFSIAG 87 >gi|237725529|ref|ZP_04556010.1| DNA (cytosine-5-)-methyltransferase [Bacteroides sp. D4] gi|229436216|gb|EEO46293.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei 5_1_36/D4] Length = 374 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 18/96 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52 DLF GIGG + + +C F+SE + Y+ +Y+AN+ + Sbjct: 6 FTFIDLFAGIGGFHTAM----HSVGGKCVFASEWDKYARISYEANYKDIEPDLFQKDSYG 61 Query: 53 -----FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI + + IP DV GFPCQPFS AG Sbjct: 62 NYLFFNNDITEAIPESIPAFDVCCGGFPCQPFSIAG 97 >gi|307710826|ref|ZP_07647254.1| DNA-cytosine methyltransferase family protein [Streptococcus mitis SK321] gi|307617432|gb|EFN96604.1| DNA-cytosine methyltransferase family protein [Streptococcus mitis SK321] Length = 406 Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 I F G+GGI L EQT +++E + Y+ +TYQ N P+T + G DI ++ Sbjct: 13 YNIAAFFSGVGGIELGFEQTNE---FRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQ 69 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 +DIP DV++ GFPCQ FS AG Sbjct: 70 PEDIPAERVDVIMGGFPCQAFSIAG 94 >gi|57506196|ref|ZP_00372116.1| C-5 cytosine-specific DNA methylase [Campylobacter upsaliensis RM3195] gi|57015523|gb|EAL52317.1| C-5 cytosine-specific DNA methylase [Campylobacter upsaliensis RM3195] Length = 315 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF GIGGI L ++ + ++ E++ + TY+AN + +I D+AK+ Sbjct: 1 MKIGSLFAGIGGIELGFKKA----GFKTAWAVELDSKACITYKANHKHKIINNDLAKVDL 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + + D+L AGFPCQ FS AG Sbjct: 57 KSLSKIDILTAGFPCQAFSVAG 78 >gi|320108256|ref|YP_004183846.1| DNA-cytosine methyltransferase [Terriglobus saanensis SP1PR4] gi|319926777|gb|ADV83852.1| DNA-cytosine methyltransferase [Terriglobus saanensis SP1PR4] Length = 347 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + LF GIGGI L E+ + EINPY + NFP+ + DI + Sbjct: 4 FTVGSLFAGIGGIDLGFERA----GFRTVWQVEINPYCQRVLAKNFPHAERYADIRECGA 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ DV++ GFPCQ S AG Sbjct: 60 HNLKPVDVIVGGFPCQDISNAG 81 >gi|15616070|ref|NP_244375.1| cytosine-specific methyltransferase [Bacillus halodurans C-125] gi|10176132|dbj|BAB07227.1| cytosine-specific methyltransferase [Bacillus halodurans C-125] Length = 326 Score = 116 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LF G GG+ + E+ + ++++I+ + T++ ++ GDI+KI Sbjct: 6 FTAVSLFSGAGGLDMGFER----IGFKIIWANDIDEDACATHRLWSDAEVVQGDISKIDV 61 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP D+LL G+PCQ FS AG Sbjct: 62 STIPSADILLGGWPCQGFSLAG 83 >gi|113478034|ref|YP_724095.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] gi|110169082|gb|ABG53622.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] Length = 413 Score = 116 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 LK +LF GIGG L + N++ ++++++ + YQ+NF ++ ++ DI KI Sbjct: 29 LKAIELFAGIGGFCLGMRAA----NIKTIWANDVSKLCCQVYQSNFGSSSIVLDDINKIN 84 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +IP+HD+L AGFPCQPFSQAG Sbjct: 85 LLEIPEHDILTAGFPCQPFSQAG 107 >gi|324323924|gb|ADY24967.1| modification methylase SPRI [Bacillus thuringiensis serovar finitimus YBT-020] Length = 290 Score = 116 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 L DLF G+GG R +EQ + +C EI+P++ K+Y+A DI K+ Sbjct: 3 LTFLDLFSGVGGFRFGMEQAGH----KCLGYVEIDPHARKSYEAIHQTEGEWSAHDITKV 58 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 +++ DV+ GFPCQ FS AG Sbjct: 59 SNKELRRFRGKVDVICGGFPCQAFSIAG 86 >gi|322376119|ref|ZP_08050628.1| DNA modification methylase [Streptococcus sp. C300] gi|321278887|gb|EFX55931.1| DNA modification methylase [Streptococcus sp. C300] Length = 406 Score = 116 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 I F G+GGI L EQT +++E + Y+ +TYQ N P+T + G DI ++ Sbjct: 13 YNIAAFFSGVGGIELGFEQTNE---FRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQ 69 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 +DIP DV++ GFPCQ FS AG Sbjct: 70 PEDIPAERVDVIMGGFPCQAFSIAG 94 >gi|332665024|ref|YP_004447812.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM 1100] gi|332333838|gb|AEE50939.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM 1100] Length = 366 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 +++ LF G GG+ + + + ++++ + + +Y N N + GDI Sbjct: 1 MRVVSLFSGAGGLDIGFRKA----GFDIVWANDFDKNACASYSKNIGNHIRCGDINHYLD 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + DI + D+++ G PCQ FS AG Sbjct: 57 EISDIKNVDLVMGGPPCQGFSVAG 80 >gi|157151353|ref|YP_001449946.1| cytosine-specific methyltransferase [Streptococcus gordonii str. Challis substr. CH1] gi|157076147|gb|ABV10830.1| cytosine-specific methyltransferase [Streptococcus gordonii str. Challis substr. CH1] Length = 406 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 I F G+GGI L EQT +++E + Y+ +TYQ N P+T + G DI ++ Sbjct: 13 YNIAAFFSGVGGIELGFEQTNE---FRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQ 69 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 +DIP DV++ GFPCQ FS AG Sbjct: 70 PEDIPAERVDVIMGGFPCQAFSIAG 94 >gi|296313785|ref|ZP_06863726.1| modification methylase NgoPII [Neisseria polysaccharea ATCC 43768] gi|296839714|gb|EFH23652.1| modification methylase NgoPII [Neisseria polysaccharea ATCC 43768] Length = 330 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 +KI LF G GG+ L E+ E ++E + T++AN P LI GDI IK Sbjct: 1 MKIISLFSGCGGLDLGFEKA----GFEVPVANEYDKTIWSTFKANHPKTHLIEGDIRSIK 56 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 +D PD D ++ G PCQ +S+AG Sbjct: 57 EEDFPDEIDGIIGGPPCQSWSEAG 80 >gi|53804329|ref|YP_114062.1| C-5 cytosine-specific DNA methylase family protein [Methylococcus capsulatus str. Bath] gi|53758090|gb|AAU92381.1| C-5 cytosine-specific DNA methylase family protein [Methylococcus capsulatus str. Bath] Length = 345 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 + LF G GG+ L F +++EIN + +TY+ N + + G Sbjct: 42 FSVISLFSGCGGMDLGFRGGFEFLGKRYAKLPFNVIWANEINEAACQTYRRNLGSHIHHG 101 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI ++ P+ DV++ GFPCQ S G Sbjct: 102 DIWQMMDSLPPEADVVIGGFPCQDISVNG 130 >gi|282851890|ref|ZP_06261250.1| modification methylase Rho11sI family protein [Lactobacillus gasseri 224-1] gi|282556899|gb|EFB62501.1| modification methylase Rho11sI family protein [Lactobacillus gasseri 224-1] Length = 343 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59 + D F GIGG R LE+ + +C E + ++ K+YQA + F DI ++ Sbjct: 1 MNFIDFFAGIGGFRSGLEKAGH----KCVGFVEFDKFARKSYQAMYDTKGEFTGYDIRQV 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +D+P D+ G PCQ S AG Sbjct: 57 RGKDLPKADIWTFGSPCQDVSIAG 80 >gi|329121769|ref|ZP_08250386.1| DNA (cytosine-5-)-methyltransferase [Dialister micraerophilus DSM 19965] gi|327468239|gb|EGF13725.1| DNA (cytosine-5-)-methyltransferase [Dialister micraerophilus DSM 19965] Length = 416 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 8/87 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-D 55 +K+ DLF G+GG L L + N E ++++ P ++ Y+ NFP T I D Sbjct: 6 IKVVDLFAGVGGFHLGLSRASNR--YEVVWANQYEPSRKNQFAYNIYKKNFPKTPISNED 63 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 I KI +IP D+L+AGFPCQ +S A Sbjct: 64 IRKINKDEIPKMDLLVAGFPCQDYSVA 90 >gi|323650438|gb|ADX97294.1| M.Cac8I [Clostridium acetobutylicum] Length = 398 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 15/93 (16%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNTLIFGDI 56 ++++ F G GG+ L + E +S++ + +V+TY N + + + GDI Sbjct: 25 LMRVISFFSGAGGMDLGFTLAGH----EIVWSNDFDKDAVQTYNENIGKYWKHESVLGDI 80 Query: 57 AKIKTQD-------IPDHDVLLAGFPCQPFSQA 82 K+ ++ IPD DV++ GFPCQ FS A Sbjct: 81 TKLLSKPFEEIDKIIPDGDVVIGGFPCQGFSIA 113 >gi|225017397|ref|ZP_03706589.1| hypothetical protein CLOSTMETH_01323 [Clostridium methylpentosum DSM 5476] gi|224949807|gb|EEG31016.1| hypothetical protein CLOSTMETH_01323 [Clostridium methylpentosum DSM 5476] Length = 485 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAK 58 + D F GIGG R E + C EI+ Y+ ++Y+A + DI K Sbjct: 4 MTFLDFFAGIGGFRKGFELC----GMRCVGHCEIDKYADRSYRAIHDVKEDEWYAADITK 59 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + D+P D+ GFPCQ S AG Sbjct: 60 VAPADLPRADLWAGGFPCQDISVAG 84 >gi|257060181|ref|YP_003138069.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|256590347|gb|ACV01234.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 336 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 43/90 (47%), Positives = 56/90 (62%), Gaps = 8/90 (8%) Query: 1 MLKITDLFCGIGGIRLDLE-------QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53 +LK +DLFCGIGG R+ L+ + C FSS+I+P + K Y+ NF F Sbjct: 15 ILKYSDLFCGIGGFRVALDIVCSTSKRWDKKIKPICVFSSDIDPDAQKNYELNFGEKP-F 73 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GDI KI+ Q IP+H++L AGFPCQPFS G Sbjct: 74 GDITKIEAQSIPNHNLLFAGFPCQPFSICG 103 >gi|327439466|dbj|BAK15831.1| site-specific DNA methylase [Solibacillus silvestris StLB046] Length = 286 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 +K DLF GIGG RL +E + EC E + Y+ K+Y+ N DI I Sbjct: 1 MKFLDLFAGIGGFRLGMEMADH----ECIGYVEWDEYARKSYEAIHNTNGEWTEHDITGI 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 + + DV+ GFPCQ FS AG Sbjct: 57 TDEQWREFKGEIDVICGGFPCQAFSVAG 84 >gi|305665822|ref|YP_003862109.1| DNA (cytosine-5-)-methyltransferase [Maribacter sp. HTCC2170] gi|88710593|gb|EAR02825.1| DNA (cytosine-5-)-methyltransferase [Maribacter sp. HTCC2170] Length = 408 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFP-NTLIFGD 55 LK+ +LF G+GG RL LE T N E +S++ P ++ Y+A F D Sbjct: 4 LKVIELFAGVGGFRLGLENTG---NYEVVWSNQWEPATKAQHASMVYEARFGSENHSNQD 60 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 I+++ T +IPD D+L+ GFPCQ +S A Sbjct: 61 ISEVPTGEIPDADILVGGFPCQDYSVA 87 >gi|323484104|ref|ZP_08089474.1| hypothetical protein HMPREF9474_01225 [Clostridium symbiosum WAL-14163] gi|323402546|gb|EGA94874.1| hypothetical protein HMPREF9474_01225 [Clostridium symbiosum WAL-14163] Length = 430 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 L DL GIGG RL LE + +C E + Y+ +Y+A + D+ K+ Sbjct: 4 LTFLDLCSGIGGFRLGLEAAGH----KCIGYCEYDKYARASYEAMYDAKGEWKADDVTKL 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K DIP D+ GFPCQ S AG Sbjct: 60 KPGDIPYADIWTFGFPCQDISIAG 83 >gi|1127162|pdb|1DCT|A Chain A, Dna (Cytosine-5) Methylase From Haeiii Covalently Bound To Dna gi|1127163|pdb|1DCT|B Chain B, Dna (Cytosine-5) Methylase From Haeiii Covalently Bound To Dna Length = 324 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G GG+ L ++ ++E + KTY++N LI GDI+KI + Sbjct: 1 MNLISLFSGAGGLDLGFQKA----GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + P D ++ G PCQ +S+ G Sbjct: 57 DEFPKCDGIIGGPPCQSWSEGG 78 >gi|67924690|ref|ZP_00518097.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67853467|gb|EAM48819.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 420 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 M+ DLF GIGG+RL LE N+E C SSEI+ + +TY NF + + GDI Sbjct: 1 MINFIDLFAGIGGMRLGLELACKKLNIETRCILSSEIDYKACETYALNF-DEIPQGDIKN 59 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I I + +LAG PCQPFS AG Sbjct: 60 ID--KISSFNFILAGSPCQPFSYAG 82 >gi|212710423|ref|ZP_03318551.1| hypothetical protein PROVALCAL_01485 [Providencia alcalifaciens DSM 30120] gi|212686843|gb|EEB46371.1| hypothetical protein PROVALCAL_01485 [Providencia alcalifaciens DSM 30120] Length = 330 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 5/82 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 +I F G GG+ L EQ +++E + TY+ N P+T L I I + Sbjct: 4 RIVSFFAGAGGLDLGFEQA----GFNVIWANEFDKDIWATYKKNHPHTELDQRSITNITS 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++P+ D ++ G PCQ +S+AG Sbjct: 60 DEVPECDGIIGGPPCQSWSEAG 81 >gi|159025987|emb|CAO87894.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 329 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + D + GIGG RL LEQ +C FS+E NP VKTY NF ++ D+ + Sbjct: 1 MTFADFYAGIGGFRLGLEQ----IGWQCVFSNENNPDCVKTYNHNFHESIKPQDVEALIP 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +PD +V GFPCQPFS+AG Sbjct: 57 SLLPDFEVFCGGFPCQPFSRAG 78 >gi|254413040|ref|ZP_05026812.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196180204|gb|EDX75196.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 355 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQ 62 I LF G GG+ L Q +++E + +TYQ+N PNT + DI + + Sbjct: 11 IVSLFSGCGGLDLGFRQA----GFNVVWANEYDKDIWQTYQSNHPNTFLDRRDIRHVPSA 66 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIPD ++ G PCQ +S+AG Sbjct: 67 DIPDCFGIVGGPPCQSWSEAG 87 >gi|319776343|ref|YP_004138831.1| Modification methylase HaeIII [Haemophilus influenzae F3047] gi|127460|sp|P20589|MTH3_HAEAE RecName: Full=Modification methylase HaeIII; Short=M.HaeIII; AltName: Full=Cytosine-specific methyltransferase HaeIII gi|148915|gb|AAA24970.1| methyltransferase [Haemophilus aegyptius] gi|2961233|gb|AAC05696.1| HaeIII DNA modification methyltransferase [Haemophilus influenzae biotype aegyptius] gi|317450934|emb|CBY87160.1| Modification methylase HaeIII [Haemophilus influenzae F3047] Length = 330 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G GG+ L ++ ++E + KTY++N LI GDI+KI + Sbjct: 1 MNLISLFSGAGGLDLGFQKA----GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + P D ++ G PCQ +S+ G Sbjct: 57 DEFPKCDGIIGGPPCQSWSEGG 78 >gi|228472108|ref|ZP_04056874.1| cytosine-specific methyltransferase NlaX [Capnocytophaga gingivalis ATCC 33624] gi|228276311|gb|EEK15035.1| cytosine-specific methyltransferase NlaX [Capnocytophaga gingivalis ATCC 33624] Length = 367 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI DLF GIGG L ++ + SEI+ ++ Y+ NFP+ GDI ++ Sbjct: 1 MKIIDLFSGIGGFALGFQRAGYQFTEH--YFSEIDKQAIANYKYNFPHAKYIGDITTLQP 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DI D++ G PCQ FS AG Sbjct: 59 ADIAGADIITFGSPCQDFSLAG 80 >gi|332879681|ref|ZP_08447373.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682372|gb|EGJ55277.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 299 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI DLF GIGG L ++ N + SEI+ +++ Y+ NFPN GDI I+ Sbjct: 1 MKIIDLFSGIGGFSLGFQRAG--YNFTEHYFSEIDKHAIANYKYNFPNAKHIGDITTIQP 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ D++ G PC FS AG Sbjct: 59 ANLAGADIITFGSPCVDFSVAG 80 >gi|967022|emb|CAA62381.1| DNA (cytosine-5-)-methyltransferase [Geobacillus stearothermophilus] gi|1262297|gb|AAA96793.1| m5C-multispecific methyltransferase [Geobacillus stearothermophilus] gi|1589631|prf||2211376A cytosine-C5-DNA methyltransferase Length = 534 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + +LF G G + + L ++++ + + Y+ N + ++ GDI I Sbjct: 14 LTVAELFAGGGLMAVGLRAA----GYNLVWANDFDKSACAAYRHNLGDHIVHGDITAIDP 69 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIPD DV+ G PCQ +S AG Sbjct: 70 ADIPDTDVIAGGPPCQDYSVAG 91 >gi|332968936|gb|EGK07982.1| DNA-cytosine methyltransferase [Desmospora sp. 8437] Length = 379 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 ++ DLF G GG+ + E ++++ N Y+VKTY NF N + GDI + Sbjct: 5 FRVIDLFSGAGGMSAGFSNLSKG-DFEPVWANDYNAYAVKTYNRNFDNHCVHGDIVDLLG 63 Query: 60 -KTQDIPDHDVLLAGFPCQPFSQ 81 T +IP D+++ G PCQ FS Sbjct: 64 DTTVEIPKADLVIGGPPCQGFSL 86 >gi|319897026|ref|YP_004135221.1| modification methylase haeiii [Haemophilus influenzae F3031] gi|317432530|emb|CBY80890.1| Modification methylase HaeIII [Haemophilus influenzae F3031] Length = 330 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G GG+ L ++ ++E + KTY++N LI GDI+KI + Sbjct: 1 MNLISLFSGAGGLDLGFQKA----GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + P D ++ G PCQ +S+ G Sbjct: 57 DEFPKCDGIIGGPPCQSWSEGG 78 >gi|127417|sp|P25262|MTB1_HERAU RecName: Full=Modification methylase HgiBI; Short=M.HgiBI; AltName: Full=Cytosine-specific methyltransferase HgiBI gi|43478|emb|CAA38927.1| methyltransferase [Herpetosiphon aurantiacus] Length = 437 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAK 58 + DLF GIGG RL LE C S+EI+ ++K Y+ N+P GDI Sbjct: 4 FRFIDLFAGIGGFRLGLEA----VGGVCVASAEIDQQAIKVYRQNWPTDGVDHNLGDITA 59 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I Q +P HDVL+ G PCQP+S AG Sbjct: 60 I--QQLPAHDVLVGGVPCQPWSIAG 82 >gi|40218563|gb|AAR83217.1| chromosome partitioning protein parB [Streptococcus pyogenes] gi|50261608|gb|AAT72376.1| methylase [Streptococcus pyogenes] Length = 388 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 L D F GIGG R LE + C E + ++V++YQA + DI K+ Sbjct: 4 LTFIDFFAGIGGFRRGLELA----GMTCIGYCEKDKFAVRSYQAMYDTEGEWYSDDITKL 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K DIP D+ AG PCQ S AG Sbjct: 60 KPNDIPKADIWTAGSPCQNVSIAG 83 >gi|50914489|ref|YP_060461.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10394] gi|50903563|gb|AAT87278.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10394] Length = 422 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 L D F GIGG R LE + C E + ++V++YQA + DI K+ Sbjct: 4 LTFIDFFAGIGGFRRGLELA----GMTCIGYCEKDKFAVRSYQAMYDTEGEWYSDDITKL 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K DIP D+ AG PCQ S AG Sbjct: 60 KPNDIPKADIWTAGSPCQNVSIAG 83 >gi|254443346|ref|ZP_05056822.1| C-5 cytosine-specific DNA methylase superfamily [Verrucomicrobiae bacterium DG1235] gi|198257654|gb|EDY81962.1| C-5 cytosine-specific DNA methylase superfamily [Verrucomicrobiae bacterium DG1235] Length = 349 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +D+F G GG R LE+ C FS E++ ++ +TYQANF T +GDI + Sbjct: 34 FTFSDIFAGAGGGRFALER----LEGRCVFSCELDKFAQRTYQANFGETP-YGDIFDVSP 88 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + +P H++L AGFPCQPFS AG Sbjct: 89 KSVPPHNILFAGFPCQPFSHAG 110 >gi|149190453|ref|ZP_01868724.1| DNA-cytosine methyltransferase [Vibrio shilonii AK1] gi|148835707|gb|EDL52673.1| DNA-cytosine methyltransferase [Vibrio shilonii AK1] Length = 373 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K+ F GIGG L E+ +E F E+N + K + ++P+ + DI + Sbjct: 81 FKVASFFAGIGGFDLGCERA----GMEVVFQCEVNSFCQKVLKKHWPSIPLHSDIKTLSA 136 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 DIPD ++ GFPCQ S A Sbjct: 137 SDIPDANIWCGGFPCQDVSLA 157 >gi|292486555|ref|YP_003529421.1| modification methylase [Erwinia amylovora CFBP1430] gi|291551968|emb|CBA19005.1| modification methylase [Erwinia amylovora CFBP1430] Length = 379 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + +F G GG+ L Q + ++++ + + TY+ N + +I GD+ + Sbjct: 17 TVVSMFSGCGGMDLGFVQA----GYDVVWANDFDADACLTYKRNIGD-IIHGDVTTLDVP 71 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 D+ + DVL AGFPCQPFS AG Sbjct: 72 DVKNLDVLTAGFPCQPFSNAG 92 >gi|127435|sp|P25264|MTC2_HERAU RecName: Full=Modification methylase HgiCII; Short=M.HgiCII; AltName: Full=Cytosine-specific methyltransferase HgiCII gi|43464|emb|CAA38935.1| methyltransferase [Herpetosiphon aurantiacus] Length = 437 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAK 58 + DLF GIGG RL LE C S+EI+ ++K Y+ N+P GDI Sbjct: 4 FRFIDLFAGIGGFRLGLEA----VGGICVGSAEIDQQAIKVYRQNWPTDRSEHNLGDITT 59 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + Q +P HD+++ G PCQP+S AG Sbjct: 60 L--QQLPAHDLVVGGVPCQPWSIAG 82 >gi|314942817|ref|ZP_07849633.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133C] gi|314953501|ref|ZP_07856416.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133A] gi|314992545|ref|ZP_07857964.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133B] gi|314997818|ref|ZP_07862728.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133a01] gi|313588159|gb|EFR67004.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133a01] gi|313592912|gb|EFR71757.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133B] gi|313594483|gb|EFR73328.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133A] gi|313598452|gb|EFR77297.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133C] Length = 144 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 ++ DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + DI + Sbjct: 1 MRFLDLFAGIGGFRLGMEQASHH----CIGFCEIDKFARRSYKAIHDTSKEVEMHDITSV 56 Query: 60 KTQDIPD---HDVLLAGFPCQPFSQAG 83 + I D+L GFPCQ FS AG Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83 >gi|252957|gb|AAA09969.1| methyltransferase [Herpetosiphon aurantiacus] Length = 437 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAK 58 + DLF GIGG RL LE C S+EI+ ++K Y+ N+P GDI Sbjct: 4 FRFIDLFAGIGGFRLGLEA----VGGICVGSAEIDQQAIKVYRQNWPTDRSEHNLGDITT 59 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + Q +P HD+++ G PCQP+S AG Sbjct: 60 L--QQLPAHDLVVGGVPCQPWSIAG 82 >gi|313677762|ref|YP_004055758.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] gi|312944460|gb|ADR23650.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] Length = 378 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 7/87 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 LK FCG GG+ L L FN+ N E ++++ + Y+ + Y +NF + I Sbjct: 10 LKAASFFCGCGGMDLGLVGNFNYLNGNYSSLPFEIVYANDFDTYATEIYNSNFEHKCITK 69 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81 DI + +IP+HD+LL GFPCQ FS Sbjct: 70 DIKDVSMSEIPEHDILLGGFPCQSFSI 96 >gi|292897792|ref|YP_003537161.1| cytosine-specific DNA methylase [Erwinia amylovora ATCC 49946] gi|291197640|emb|CBJ44735.1| putative modification methylase (cytosine-specific DNA methylase) [Erwinia amylovora ATCC 49946] Length = 372 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + +F G GG+ L Q + ++++ + + TY+ N + +I GD+ + Sbjct: 10 TVVSMFSGCGGMDLGFVQA----GYDVVWANDFDADACLTYKRNIGD-IIHGDVTTLDVP 64 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 D+ + DVL AGFPCQPFS AG Sbjct: 65 DVKNLDVLTAGFPCQPFSNAG 85 >gi|238855331|ref|ZP_04645644.1| methyl transferase [Lactobacillus jensenii 269-3] gi|282933726|ref|ZP_06339082.1| Phi-3T prophage-derived modification methylase Phi3TI [Lactobacillus jensenii 208-1] gi|313472896|ref|ZP_07813384.1| type II DNA modification methyltransferase [Lactobacillus jensenii 1153] gi|238832031|gb|EEQ24355.1| methyl transferase [Lactobacillus jensenii 269-3] gi|239528918|gb|EEQ67919.1| type II DNA modification methyltransferase [Lactobacillus jensenii 1153] gi|281302166|gb|EFA94412.1| Phi-3T prophage-derived modification methylase Phi3TI [Lactobacillus jensenii 208-1] Length = 343 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59 + D F GIGG R LE+ + +C E + ++ K+YQA + F DI ++ Sbjct: 1 MNFIDFFAGIGGFRSGLEKAGH----KCVGFVEFDKFARKSYQAMYDTKGEFTGYDIRQV 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +D+P D+ G PCQ S AG Sbjct: 57 RGKDLPTADIWTFGSPCQDVSIAG 80 >gi|288958310|ref|YP_003448651.1| DNA (cytosine-5-)-methyltransferase [Azospirillum sp. B510] gi|288910618|dbj|BAI72107.1| DNA (cytosine-5-)-methyltransferase [Azospirillum sp. B510] Length = 375 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ DLFCG GG+ L Q F+ + + ++ +TY+ NF + +I GDI +I + Sbjct: 31 KLIDLFCGAGGLTLGFVQA----GFRPVFAIDDDRHAAETYRLNFGDHIICGDIRQI--E 84 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 P DV++ G PCQ FS+ G Sbjct: 85 SFPAADVVIGGPPCQGFSRLG 105 >gi|320156908|ref|YP_004189287.1| DNA-cytosine methyltransferase [Vibrio vulnificus MO6-24/O] gi|319932220|gb|ADV87084.1| DNA-cytosine methyltransferase [Vibrio vulnificus MO6-24/O] Length = 552 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 39/116 (33%), Positives = 48/116 (41%), Gaps = 38/116 (32%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------- 48 DLF GIGG+R E + +C F+SE + + +TY AN Sbjct: 98 FTFIDLFAGIGGLRKGFE----NVGGKCVFTSEWDEKARRTYLANHYVDESELPYFLNSE 153 Query: 49 -----NTLIFGDIAKIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 F DI +I + IP HDVLLAGFPCQPFS AG Sbjct: 154 QDDGMKNTNFMDITQITLSGDPEATELQQQASILKHIPKHDVLLAGFPCQPFSLAG 209 >gi|298504551|gb|ADI83274.1| DNA cytosine methyltransferase [Geobacter sulfurreducens KN400] Length = 428 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI--- 59 ++ DLFCG GG+ L + F + ++++ N Y+ +TY NF N + GDI +I Sbjct: 36 RVIDLFCGAGGMTLGFTK-FTNHVFTPVWANDFNAYAARTYNRNFGNHCVVGDIVEILER 94 Query: 60 KTQDIPDHDVLLAGFPCQPFSQ 81 IP DV++ G PCQ FS Sbjct: 95 PETVIPKADVVIGGPPCQGFSL 116 >gi|7243959|gb|AAB21481.2| cytosine DNA methyltransferase homolog [Neisseria gonorrhoeae] Length = 347 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I Sbjct: 17 KILSLFSGCGGLYLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 72 Query: 63 D--IPDHDVLLAGFPCQPFSQ 81 D IPD D++L GFPCQ FS Sbjct: 73 DPTIPDCDIILGGFPCQDFSM 93 >gi|167920593|ref|ZP_02507684.1| cytosine-specific DNA methylase [Burkholderia pseudomallei BCC215] Length = 454 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF G+GG L L++ C +++E + Y+ NF GDI I Sbjct: 4 FRFVDLFAGLGGFHLALQR----LGGTCVYAAEWQEHLRDLYEVNFGLRP-EGDITLISP 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +D+P HDVL AGFPCQPFS+AG Sbjct: 59 KDVPSHDVLTAGFPCQPFSKAG 80 >gi|159029905|emb|CAO90959.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 346 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L D + GIGG RL LEQ +C FS+E NP VKTY NF ++ D+ + Sbjct: 18 LTFADFYAGIGGFRLGLEQ----IGWQCVFSNENNPDCVKTYNHNFHESIKPQDVEALIP 73 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +PD +V GFPCQPFS+AG Sbjct: 74 SLLPDFEVFCGGFPCQPFSRAG 95 >gi|154502686|ref|ZP_02039746.1| hypothetical protein RUMGNA_00499 [Ruminococcus gnavus ATCC 29149] gi|153796569|gb|EDN78989.1| hypothetical protein RUMGNA_00499 [Ruminococcus gnavus ATCC 29149] Length = 458 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 ++ DLF GIGG R L + C E++ Y+ K Y+ F D I Sbjct: 35 IRFFDLFSGIGGFREGLRRAG---GFTCVGHCEVDAYADKNYRLLFDTEGEWFCNDARTI 91 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T+ +PD D+L AGFPCQ FS AG Sbjct: 92 ETERMPDFDLLCAGFPCQAFSIAG 115 >gi|127447|sp|P25266|MTE1_HERAU RecName: Full=Modification methylase HgiEI; Short=M.HgiEI; AltName: Full=Cytosine-specific methyltransferase HgiEI gi|43471|emb|CAA38944.1| methyltransferase [Herpetosiphon aurantiacus] Length = 437 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAK 58 + DLF GIGG RL LE C S+EI+ ++K Y N+P GDI + Sbjct: 4 FRFIDLFAGIGGFRLGLEA----VGGVCVASAEIDQQAIKVYWQNWPTDGVDHNLGDITQ 59 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I Q +P HDVL+ G PCQP+S AG Sbjct: 60 I--QQLPAHDVLVGGVPCQPWSIAG 82 >gi|192824080|ref|YP_001994542.1| gp84 [Mycobacterium phage KBG] gi|190610310|gb|ACE79832.1| gp84 [Mycobacterium phage KBG] Length = 237 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 + + LF GIGG+ L LE+ + EI+P+ + + ++P+ D+ Sbjct: 1 MNVLSLFAGIGGLELGLER----LGMRVVGQVEIDPFCQQVLEKHWPDVPKHDDVRTAVE 56 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++++ P DV+ GFPCQPFS AG Sbjct: 57 WWESEERPGVDVICGGFPCQPFSSAG 82 >gi|315639354|ref|ZP_07894516.1| DNA (cytosine-5-)-methyltransferase [Campylobacter upsaliensis JV21] gi|315480680|gb|EFU71322.1| DNA (cytosine-5-)-methyltransferase [Campylobacter upsaliensis JV21] Length = 320 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 6/83 (7%) Query: 2 LK--ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K + LF G GG+ L + E F+++I+ + ++Y+ N ++ DI + Sbjct: 1 MKPSVISLFSGCGGLDLGFIKA----GFEVVFANDIDKEACESYEKNIGKHILCKDIYTL 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 ++IP+ D+L+ GFPC F+ A Sbjct: 57 DVKEIPNADLLIGGFPCLGFTIA 79 >gi|332881189|ref|ZP_08448845.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680863|gb|EGJ53804.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 367 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI DLF GIGG L ++ + SEI+ +++ Y+ NFPN GDI I+ Sbjct: 1 MKIIDLFSGIGGFSLGFQRASYQFTEH--YFSEIDKHAIANYKYNFPNAKHIGDITTIQP 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ D++ G PC FS AG Sbjct: 59 ANLAGADIITFGSPCVDFSVAG 80 >gi|314055098|ref|YP_004063436.1| cytosine-specific methyltransferase [Ostreococcus tauri virus 2] gi|313574989|emb|CBI70002.1| cytosine-specific methyltransferase [Ostreococcus tauri virus 2] Length = 315 Score = 114 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + DLF G G LE T EC F+++ + S + Y N +T + GD+ I + Sbjct: 4 RFIDLFAGTGAFTYALENTGK---YECVFANDFDKSSKEIYTNNHDSTFVLGDLNDILVE 60 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 DIP+HD+L GFPCQPFS AG Sbjct: 61 DIPEHDLLCGGFPCQPFSIAG 81 >gi|157412142|ref|YP_001481483.1| DNA cytosine methylase [Escherichia coli APEC O1] gi|99867167|gb|ABF67812.1| cytosine methylase [Escherichia coli APEC O1] Length = 489 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 48/102 (47%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57 DLF GIGG+R + +C F+SE N YS +TY+AN+ DI Sbjct: 106 FSFIDLFAGIGGLRSGFDA----IGGKCLFTSEWNTYSSRTYRANWYCDENEHRFNSDIR 161 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I IPDHDVLLAGFPCQPFS AG Sbjct: 162 DITLSNRPEVTDDEAYKFIDASIPDHDVLLAGFPCQPFSIAG 203 >gi|166366204|ref|YP_001658477.1| DNA cytosine methylase [Microcystis aeruginosa NIES-843] gi|166088577|dbj|BAG03285.1| DNA cytosine methylase [Microcystis aeruginosa NIES-843] Length = 346 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L D + GIGG RL LEQ +C FS+E NP VKTY NF ++ D+ + Sbjct: 18 LTFADFYAGIGGFRLGLEQ----IGWQCVFSNENNPDCVKTYNHNFHESIKPQDVEALIP 73 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +PD +V GFPCQPFS+AG Sbjct: 74 SLLPDFEVFCGGFPCQPFSRAG 95 >gi|219870523|ref|YP_002474898.1| Type II modification methyltransferase HpaII/DNA (cytosine-5-)-methyltransferase [Haemophilus parasuis SH0165] gi|219690727|gb|ACL31950.1| Type II modification methyltransferase HpaII/DNA (cytosine-5-)-methyltransferase [Haemophilus parasuis SH0165] Length = 350 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA-KIK 60 DLF G GG RL +E+ + C FSSEI+ + KTY NF +GDI + Sbjct: 26 FTFIDLFAGFGGFRLAMEKLGGY----CVFSSEIDENAQKTYATNFGEKP-YGDITLEET 80 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 + IP D+L AGFPCQ FS AG Sbjct: 81 KRLIPTTFDILCAGFPCQAFSIAG 104 >gi|226807724|ref|YP_002791420.1| Dcm [Enterobacter cloacae] gi|226810038|ref|YP_002791733.1| Dcm [Enterobacter cloacae] gi|226425951|gb|ACO54044.1| Dcm [Enterobacter cloacae] gi|226426265|gb|ACO54357.1| Dcm [Enterobacter cloacae] Length = 489 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 48/102 (47%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57 DLF GIGG+R + +C F+SE N YS +TY+AN+ DI Sbjct: 106 FSFIDLFAGIGGLRSGFDA----IGGKCLFTSEWNTYSSRTYRANWYCDENEHRFNSDIR 161 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I IPDHDVLLAGFPCQPFS AG Sbjct: 162 DITLSNRPEVTDDEAYKFIDASIPDHDVLLAGFPCQPFSIAG 203 >gi|38347986|ref|NP_941235.1| DNA cytosine methylase [Serratia marcescens] gi|190410308|ref|YP_001965811.1| dcm [Klebsiella pneumoniae] gi|38259463|emb|CAE51691.1| DNA-cytosine methyltransferase [Serratia marcescens] gi|146151102|gb|ABQ02868.1| dcm [Klebsiella pneumoniae] Length = 475 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 48/102 (47%), Gaps = 24/102 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57 DLF GIGG+R + +C F+SE N YS +TY+AN+ DI Sbjct: 92 FSFIDLFAGIGGLRSGFDA----IGGKCLFTSEWNTYSSRTYRANWYCDENEHRFNSDIR 147 Query: 58 KIK----------------TQDIPDHDVLLAGFPCQPFSQAG 83 I IPDHDVLLAGFPCQPFS AG Sbjct: 148 DITLSNRPEVTDDEAYKFIDASIPDHDVLLAGFPCQPFSIAG 189 >gi|228469860|ref|ZP_04054799.1| modification methylase HaeIII [Porphyromonas uenonis 60-3] gi|228308495|gb|EEK17283.1| modification methylase HaeIII [Porphyromonas uenonis 60-3] Length = 359 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 + + LF G GG+ L + ++E + T++ NFP+ + GDI KI Sbjct: 3 MTLISLFSGAGGMDLGFHKA----GFTTILANEYDKTICPTFKHNFPDVPLLEGDIRKIP 58 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 + P H D ++ G PCQ +S+AG Sbjct: 59 ERLFPRHIDGIIGGPPCQSWSEAG 82 >gi|187778292|ref|ZP_02994765.1| hypothetical protein CLOSPO_01884 [Clostridium sporogenes ATCC 15579] gi|187771917|gb|EDU35719.1| hypothetical protein CLOSPO_01884 [Clostridium sporogenes ATCC 15579] Length = 355 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K D+FCGIG +R+ EQ + EC +S E + + K Y F GDI K + Sbjct: 1 MKFIDMFCGIGTVRMGFEQAGH----ECVYSIEWDKWKRKIYSIIFGGEPEGGDITKCRA 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++P D G PCQ FS AG Sbjct: 57 NELPKSDCWCFGAPCQDFSVAG 78 >gi|314942783|ref|ZP_07849602.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133C] gi|314953681|ref|ZP_07856564.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133A] gi|313594323|gb|EFR73168.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133A] gi|313598474|gb|EFR77319.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133C] Length = 380 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 + DLF GIGG L +EQ + +C EI+ ++ ++Y+A + DI + Sbjct: 1 MTFLDLFAGIGGFCLGMEQAGH----QCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSV 56 Query: 60 KTQDIPD---HDVLLAGFPCQPFSQAG 83 + I D+L GFPCQ FS AG Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83 >gi|300933957|ref|ZP_07149213.1| DNA-cytosine methyltransferase [Corynebacterium resistens DSM 45100] Length = 363 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 7/82 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61 K+ F G GG+ L L+ + ++++ + +V TY+ N ++ GDI +I Sbjct: 6 KVVSTFAGCGGLDLGLQ----DVGFDIVWANDFSKEAVATYRHNINAHIVDGDITEIDPF 61 Query: 62 --QDIPDHDVLLAGFPCQPFSQ 81 + IPD D++ GFPCQ FS Sbjct: 62 TDETIPDADLVTGGFPCQDFSM 83 >gi|228474527|ref|ZP_04059258.1| site-specific DNA methylase [Staphylococcus hominis SK119] gi|228271190|gb|EEK12558.1| site-specific DNA methylase [Staphylococcus hominis SK119] Length = 414 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 8/83 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61 + LF G GG+ L ++ ++++ +V TY+ N + +++GDI KI Sbjct: 5 NVISLFAGAGGMDLGFKKA----GFNIIWANDFEKDAVTTYKNNIGDHIVYGDITKIDIK 60 Query: 62 QDIP---DHDVLLAGFPCQPFSQ 81 ++P + D+++ GFPCQ FS Sbjct: 61 NELPNEEEIDLVIGGFPCQGFSV 83 >gi|325690436|gb|EGD32439.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK115] Length = 390 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 + D F GIGG R LE T ++C E + ++ K+Y+A + DI I Sbjct: 3 ITFLDFFAGIGGFRCGLELT----GMKCIGYCEKDKFARKSYEAMYETKGEWFHDDITSI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +P D+ AG PCQ S AG Sbjct: 59 NPAQLPKADLWCAGSPCQNLSIAG 82 >gi|69244913|ref|ZP_00603103.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium DO] gi|257883136|ref|ZP_05662789.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,502] gi|257891884|ref|ZP_05671537.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,410] gi|258616872|ref|ZP_05714642.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium DO] gi|289567034|ref|ZP_06447433.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium D344SRF] gi|293563825|ref|ZP_06678258.1| methyl transferase [Enterococcus faecium E1162] gi|294619669|ref|ZP_06699086.1| methyl transferase [Enterococcus faecium E1679] gi|68196079|gb|EAN10510.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium DO] gi|257818794|gb|EEV46122.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,502] gi|257828244|gb|EEV54870.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium 1,231,410] gi|289161170|gb|EFD09071.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium D344SRF] gi|291594089|gb|EFF25546.1| methyl transferase [Enterococcus faecium E1679] gi|291604195|gb|EFF33696.1| methyl transferase [Enterococcus faecium E1162] Length = 380 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 + DLF GIGG L +EQ + +C EI+ ++ ++Y+A + DI + Sbjct: 1 MTFLDLFAGIGGFCLGMEQAGH----QCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSV 56 Query: 60 KTQDIPD---HDVLLAGFPCQPFSQAG 83 + I D+L GFPCQ FS AG Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83 >gi|302866239|ref|YP_003834876.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC 27029] gi|302569098|gb|ADL45300.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC 27029] Length = 368 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 L + DLF G GG+ + ++ S E + + TY ANF + DI KIK Sbjct: 8 LSMIDLFAGCGGMTVGF----HNEGFRPILSVEWDRAAASTYAANFGKEHTRWEDIEKIK 63 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +IPD DV++ G PCQ FS G Sbjct: 64 DDEIPDADVIIGGPPCQGFSNLG 86 >gi|315174236|gb|EFU18253.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX1346] Length = 192 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 + DLF GIGG RL +EQ + +C EI+ ++ ++Y+A + DI + Sbjct: 1 MTFLDLFAGIGGFRLGMEQAGH----QCIGFCEIDEFARRSYKAIHDTSKEVEMHDITSV 56 Query: 60 KTQ---DIPDHDVLLAGFPCQPFSQAG 83 + + DVL GFPCQ FS AG Sbjct: 57 SDEFVRSLGPVDVLCGGFPCQAFSIAG 83 >gi|268680341|ref|YP_003304772.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM 6946] gi|268618372|gb|ACZ12737.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM 6946] Length = 335 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + I LF G GG+ L E+ + +++E + +T++ NFP+T L I I Sbjct: 1 MNIISLFSGAGGLDLGFEKA----GFKTVWANEYDKEIWETFEKNFPHTTLDRRSIRNIP 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + DIP+ L+ G PCQ +S+AG Sbjct: 57 SCDIPEAIGLIGGPPCQSWSEAG 79 >gi|262113733|emb|CAR95400.1| hypothetical protein [Streptococcus phage phi-m46.1] Length = 417 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 L D F G+GG R LE +C E + ++ K+Y+A + DI I Sbjct: 3 LTFLDFFAGVGGFRRGLELA----GFKCIGYCEKDKFARKSYEAMYDTKGEWFHDDITSI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +P D+ AG PCQ S AG Sbjct: 59 DPTQLPKADLWCAGSPCQNVSIAG 82 >gi|113971536|ref|YP_735329.1| DNA-cytosine methyltransferase [Shewanella sp. MR-4] gi|113886220|gb|ABI40272.1| DNA-cytosine methyltransferase [Shewanella sp. MR-4] Length = 417 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 40/91 (43%), Positives = 46/91 (50%), Gaps = 14/91 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGG L L + + FSSE + + TY N+ T FGDI + Sbjct: 82 FKFIDLFAGIGGFNLAL----TSQGGKAVFSSEWDKSAKITYFNNYGKTP-FGDINQFTA 136 Query: 62 Q---------DIPDHDVLLAGFPCQPFSQAG 83 Q IPDHDVL GFPCQPFS AG Sbjct: 137 QGVSNEFIETMIPDHDVLAGGFPCQPFSHAG 167 >gi|153815491|ref|ZP_01968159.1| hypothetical protein RUMTOR_01726 [Ruminococcus torques ATCC 27756] gi|145847133|gb|EDK24051.1| hypothetical protein RUMTOR_01726 [Ruminococcus torques ATCC 27756] Length = 439 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 ++ DLF GIGG R L + C E++ Y+ K Y+ F D I Sbjct: 16 IRFFDLFSGIGGFREGLRRAG---GFTCVGHCEVDAYADKNYRLLFDTEGEWFCNDARTI 72 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T+ +PD D+L AGFPCQ FS AG Sbjct: 73 ETERMPDFDLLCAGFPCQAFSIAG 96 >gi|257870038|ref|ZP_05649691.1| DNA methylase [Enterococcus gallinarum EG2] gi|257804202|gb|EEV33024.1| DNA methylase [Enterococcus gallinarum EG2] Length = 401 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKT 61 + F G+GGI L EQT +++E + + TY N+P T + DI ++ + Sbjct: 14 TVAAFFSGVGGIELGFEQTGK---FRVVYANEFDKNAQITYAENYPQTPLDKRDIHEVDS 70 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +++P D+++ GFPCQ FS AG Sbjct: 71 KEVPVSDLIVGGFPCQAFSIAG 92 >gi|313575370|emb|CBR26899.1| hypothetical protein [Streptococcus phage phi-SsUD.1] Length = 419 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 L D F G+GG R LE +C E + ++ K+Y+A + DI I Sbjct: 3 LTFLDFFAGVGGFRRGLELA----GFKCIGYCEKDKFARKSYEAMYDTKGEWFHDDITSI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +P D+ AG PCQ S AG Sbjct: 59 DPTQLPKADLWCAGSPCQNVSIAG 82 >gi|260664324|ref|ZP_05865177.1| DNA-cytosine methyltransferase [Lactobacillus jensenii SJ-7A-US] gi|260562210|gb|EEX28179.1| DNA-cytosine methyltransferase [Lactobacillus jensenii SJ-7A-US] Length = 298 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 +K DLF G+GG R LE + +C E + ++ K+YQA + + DI Sbjct: 1 MKFLDLFSGVGGFRTGLEAAGH----KCVGFIEFDKFARKSYQAIYDTKDEFTKNDIRTT 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K ++PD + GFPCQ S AG Sbjct: 57 KGSELPDAGIWCFGFPCQDISIAG 80 >gi|238923038|ref|YP_002936551.1| DcmB [Eubacterium rectale ATCC 33656] gi|238874710|gb|ACR74417.1| DcmB [Eubacterium rectale ATCC 33656] Length = 672 Score = 113 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 + I LF G GG+ L E ++E + T++AN PNT I GDI ++ Sbjct: 1 MNIISLFSGCGGLDLGFESA----GFNIPVANEFDKTIWATFKANHPNTHLIEGDIRQVT 56 Query: 61 TQDIP-----DHDVLLAGFPCQPFSQAG 83 +DI + D ++ G PCQ +S+AG Sbjct: 57 KEDIEQYIDGEIDGIIGGPPCQSWSEAG 84 >gi|329769727|ref|ZP_08261128.1| hypothetical protein HMPREF0433_00892 [Gemella sanguinis M325] gi|328838089|gb|EGF87707.1| hypothetical protein HMPREF0433_00892 [Gemella sanguinis M325] Length = 406 Score = 113 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 + F G+GGI L E+T +++EI+ + TY+ NFPN + DI ++K Sbjct: 10 YNVAAFFSGVGGIELGFEKTNK---FRVVYANEIDKNARITYKLNFPNVFLDPRDIHEVK 66 Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83 ++I + DV++ GFPCQ FS AG Sbjct: 67 PEEIKEEKLDVIVGGFPCQAFSIAG 91 >gi|327399867|ref|YP_004346898.1| cytosine-specific methyltransferase [Lactobacillus amylovorus GRL 1112] gi|327182537|gb|AEA32972.1| cytosine-specific methyltransferase [Lactobacillus amylovorus GRL 1112] Length = 401 Score = 113 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 5/81 (6%) Query: 5 TD-LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 D F G+GGI L +QT +++E + + KTY N P T + G DI +K+ Sbjct: 12 IDAFFAGVGGIELGFKQTGE---FRVVYANEFDKNARKTYAENNPETPLDGRDIHDVKSD 68 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +IPD +V++ GFPCQ FS AG Sbjct: 69 EIPDSNVIMGGFPCQAFSIAG 89 >gi|254671395|emb|CBA08869.1| hypothetical protein NME_1963 [Neisseria meningitidis alpha153] gi|316984659|gb|EFV63623.1| modification methylase NlaIV domain protein [Neisseria meningitidis H44/76] Length = 86 Score = 113 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 2/83 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K DLF + GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI Sbjct: 4 IKFIDLFSEMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 +T DIPD D+LLAGFPCQ FS A Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFA 86 >gi|300727022|ref|ZP_07060441.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Prevotella bryantii B14] gi|299775566|gb|EFI72157.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Prevotella bryantii B14] Length = 446 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 3/86 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNT-LIFGDIA 57 M+ DLF G+GGIR+ Q N +E C F+SEI ++ NFP +I DI Sbjct: 1 MIDYIDLFAGLGGIRIGFTQAANELGLESRCVFTSEIKDSALCALNHNFPGENIIKRDIT 60 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 K+ + +IP ++LL GFPCQ FS AG Sbjct: 61 KVASDEIPHFNILLGGFPCQAFSFAG 86 >gi|57505223|ref|ZP_00371152.1| cytosine specific DNA methyltransferase (BSP6IM) [Campylobacter upsaliensis RM3195] gi|57016359|gb|EAL53144.1| cytosine specific DNA methyltransferase (BSP6IM) [Campylobacter upsaliensis RM3195] Length = 326 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 + D GIGG RL LE +C SEI+ ++KTY+ F N L GD+ +I Sbjct: 1 MTFIDFCSGIGGGRLGLESC----GFKCLGFSEIDRAAIKTYKTFFDTSNELELGDLTQI 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 Q +PD D+L++GFPCQ FS G Sbjct: 57 NPQSLPDFDLLISGFPCQSFSIVG 80 >gi|294651999|ref|ZP_06729281.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter haemolyticus ATCC 19194] gi|292822115|gb|EFF81036.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter haemolyticus ATCC 19194] Length = 336 Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 LKI LF G GG+ L ++ F++E + TY+ N PNT + I +IK Sbjct: 3 LKIVSLFSGAGGLDLGFQKA----GFNITFANEFDKDIWATYEYNHPNTHLDKRSITEIK 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++P+ D ++ G PCQ +S+ G Sbjct: 59 ENEVPECDGIIGGPPCQSWSEGG 81 >gi|229100187|ref|ZP_04231087.1| hypothetical protein bcere0020_53880 [Bacillus cereus Rock3-29] gi|228683229|gb|EEL37207.1| hypothetical protein bcere0020_53880 [Bacillus cereus Rock3-29] Length = 306 Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 L DLF G+GG RL +EQ + C E + ++ K+Y+A + DI+ I Sbjct: 3 LTFIDLFAGLGGFRLGMEQAGH----RCLGYVEWDKFARKSYEAIHDTGEEWTWNDISTI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 ++IP D GFPCQ S G Sbjct: 59 DYRNIPKSDCWTFGFPCQDISIGG 82 >gi|331090242|ref|ZP_08339130.1| hypothetical protein HMPREF1025_02713 [Lachnospiraceae bacterium 3_1_46FAA] gi|330402188|gb|EGG81760.1| hypothetical protein HMPREF1025_02713 [Lachnospiraceae bacterium 3_1_46FAA] Length = 464 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 L DL GIGG RL LE + C E + ++ +Y+A + D+ K+ Sbjct: 4 LTFLDLCSGIGGFRLGLESAGH----RCIGYCEYDRFARASYEAMYDTEGEWKADDVTKL 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K++D+P D+ GFPCQ S AG Sbjct: 60 KSEDVPYADIWCFGFPCQDISVAG 83 >gi|321312120|ref|YP_004204407.1| cytosine-specific methyltransferase [Bacillus subtilis BSn5] gi|320018394|gb|ADV93380.1| cytosine-specific methyltransferase [Bacillus subtilis BSn5] Length = 380 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI- 59 K LF G GG+ + ++ V+ +++EI+ + TY+ N P+T L GDI+++ Sbjct: 5 FKAISLFSGAGGMDIGFQKA----GVDVVWANEIDKDACNTYELNNPDTYLRRGDISEVY 60 Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83 + ++ D+L G PCQ FS AG Sbjct: 61 EELKNYNGIDLLFGGPPCQGFSVAG 85 >gi|268610192|ref|ZP_06143919.1| cytosine-specific DNA methylase [Ruminococcus flavefaciens FD-1] Length = 475 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 + DLF G+GG Q + EC ++E N VKTY+ N+ + GD+ KI Sbjct: 59 FRFIDLFAGVGGFH----QAMRYLGGECVMAAETNQECVKTYKLNYKIDEKEVRGDVNKI 114 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + I DVL AGFPCQPFS+AG Sbjct: 115 DPETIAPFDVLCAGFPCQPFSKAG 138 >gi|118577457|ref|YP_899696.1| DNA-cytosine methyltransferase [Pelobacter propionicus DSM 2379] gi|118504962|gb|ABL01443.1| DNA-cytosine methyltransferase [Pelobacter propionicus DSM 2379] Length = 313 Score = 112 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 7/90 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIF 53 M+ + LF G GG+ L F+ + +++E+N + +TY+ N + + Sbjct: 7 MITVVSLFSGCGGMDLGFSGGFDFLGEHYAKTQFKIIWANELNGAACRTYRKNIGHHIKE 66 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GDI + + D+++ GFPCQ S G Sbjct: 67 GDIWQTMPEMPQSADLVIGGFPCQDISVNG 96 >gi|323127564|gb|ADX24861.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 96 Score = 112 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL L + + EC EI+ ++ K+Y+A + + F DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGLTR----QGHECIGFCEIDKFARKSYKAIYETEGEIEFHDIRQV 56 Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83 QD D++ GFPCQ FS AG Sbjct: 57 TDQDFRQLRGQVDIICGGFPCQAFSLAG 84 >gi|269986305|gb|EEZ92611.1| DNA-cytosine methyltransferase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 349 Score = 112 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LK--ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K + LF G GG+ L F+++ + +TY+ NF + L I I Sbjct: 1 MKCSLISLFSGCGGLDLGFRNA----GFGIVFANDNDKAVWETYEKNFGHKLDGRSIIDI 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K++D+PD D ++ G PCQ +S AG Sbjct: 57 KSEDLPDADGIIGGPPCQSWSLAG 80 >gi|325285907|ref|YP_004261697.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489] gi|324321361|gb|ADY28826.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489] Length = 414 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 K+ +LF G GG+ + LE+ ++C +EI+ ++ +T + N P+ ++ GDI Sbjct: 75 FKVLELFAGAGGLAVGLEKA----GIKCVALNEIDKWACQTLRENRPHWNVLEGDIKSFN 130 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 + + D++ GFPCQ FS AG Sbjct: 131 FSEYNNQVDIVTGGFPCQAFSYAG 154 >gi|110643909|ref|YP_671639.1| putative type II 5-cytosoine methyltransferase [Escherichia coli 536] gi|110345501|gb|ABG71738.1| putative type II 5-cytosoine methyltransferase [Escherichia coli 536] Length = 305 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 4/75 (5%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDH 67 F G GG+ L L+Q+ ++ ++++I +V TY+ N ++ GDIA I + DIP+ Sbjct: 2 FSGAGGLDLGLKQS----GLDIIWANDIYEDAVDTYKRNIGEHIVLGDIANINSSDIPNC 57 Query: 68 DVLLAGFPCQPFSQA 82 DV++ GFPCQ FS A Sbjct: 58 DVVVGGFPCQGFSVA 72 >gi|57506146|ref|ZP_00372067.1| cytosine specific DNA methyltransferase (DDEM) [Campylobacter upsaliensis RM3195] gi|57015541|gb|EAL52334.1| cytosine specific DNA methyltransferase (DDEM) [Campylobacter upsaliensis RM3195] Length = 316 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 4/79 (5%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF G GG+ L + E F+++I+ + ++Y+ N ++ DI + ++ Sbjct: 1 MISLFSGCGGLDLGFIKA----GFEIVFANDIDKEACESYEKNIGKHILCKDIYTLDMKE 56 Query: 64 IPDHDVLLAGFPCQPFSQA 82 IP+ D+L+ GFPC F+ A Sbjct: 57 IPNADILIGGFPCLGFTIA 75 >gi|329123496|ref|ZP_08252060.1| modification methylase HaeIII [Haemophilus aegyptius ATCC 11116] gi|327471078|gb|EGF16533.1| modification methylase HaeIII [Haemophilus aegyptius ATCC 11116] Length = 133 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G GG+ L ++ ++E + KTY++N LI GDI+KI + Sbjct: 21 MNLISLFSGAGGLDLGFQKA----GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISS 76 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + P D ++ G PCQ +S+ G Sbjct: 77 DEFPKCDGIIGGPPCQSWSEGG 98 >gi|313144510|ref|ZP_07806703.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi CCUG 18818] gi|313129541|gb|EFR47158.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi CCUG 18818] Length = 323 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 + D GIGG RL LE ++C SEI+ ++KTY+ N N L GD+ +I Sbjct: 1 MTFIDFCSGIGGGRLGLESC----GLKCLGFSEIDRAAIKTYKTFFNTSNELELGDLTQI 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 Q +PD D+L++GFPCQ FS G Sbjct: 57 NPQSLPDFDLLISGFPCQSFSIVG 80 >gi|169823586|ref|YP_001691089.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328] gi|167832206|dbj|BAG09121.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328] Length = 330 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G GG+ L + ++E + +TY+ N+ LI DI +++ Sbjct: 1 MDLISLFSGAGGLDLGFIKA----GFNVLVANEYDKRIWETYEKNYETRLIKDDITNVRS 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++PD D L+ G PCQ +S+AG Sbjct: 57 NELPDCDGLIGGPPCQSWSEAG 78 >gi|170718974|ref|YP_001784137.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] gi|168827103|gb|ACA32474.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] Length = 323 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D GIGG RL LE +EC SE++P TYQ F + +GD+ KI Sbjct: 7 LKFMDFCSGIGGGRLGLE----LNGMECIAHSELDPNPDLTYQLFFNDKNNYGDLTKINI 62 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+P+ DV+LAGFPCQ FS G Sbjct: 63 NDLPEFDVMLAGFPCQTFSIVG 84 >gi|328948537|ref|YP_004365874.1| DNA (cytosine-5-)-methyltransferase [Treponema succinifaciens DSM 2489] gi|328448861|gb|AEB14577.1| DNA (cytosine-5-)-methyltransferase [Treponema succinifaciens DSM 2489] Length = 129 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ LF G GG+ L E+ E ++E + T++ N PNT LI GDI IK Sbjct: 1 MKVISLFSGCGGLDLGFEKA----GFEIPIANEFDSSIWATFEKNHPNTKLIRGDIRNIK 56 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 +D PD D ++ G PCQ +S+AG Sbjct: 57 EEDFPDEIDGIIGGPPCQSWSEAG 80 >gi|224438066|ref|ZP_03659005.1| DNA-cytosine methyltransferase [Helicobacter cinaedi CCUG 18818] Length = 342 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 + D GIGG RL LE ++C SEI+ ++KTY+ N N L GD+ +I Sbjct: 20 MTFIDFCSGIGGGRLGLESC----GLKCLGFSEIDRAAIKTYKTFFNTSNELELGDLTQI 75 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 Q +PD D+L++GFPCQ FS G Sbjct: 76 NPQSLPDFDLLISGFPCQSFSIVG 99 >gi|329767116|ref|ZP_08258644.1| hypothetical protein HMPREF0428_00341 [Gemella haemolysans M341] gi|328837841|gb|EGF87466.1| hypothetical protein HMPREF0428_00341 [Gemella haemolysans M341] Length = 396 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 6/80 (7%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDIP 65 F G+GGI L E+T +++EI+ + TY+ NFP+ + DI ++K ++I Sbjct: 5 FFSGVGGIELGFEKTNK---FRVVYANEIDKNARITYKLNFPDVFLDPRDIHEVKPEEIK 61 Query: 66 D--HDVLLAGFPCQPFSQAG 83 + DV++ GFPCQ FS AG Sbjct: 62 EEKLDVIVGGFPCQAFSIAG 81 >gi|210617281|ref|ZP_03291507.1| hypothetical protein CLONEX_03729 [Clostridium nexile DSM 1787] gi|210149385|gb|EEA80394.1| hypothetical protein CLONEX_03729 [Clostridium nexile DSM 1787] Length = 455 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 ++ DLF GIGG R L + C E++ Y+ K Y+ F D I Sbjct: 32 IQFFDLFSGIGGFREGLRRAG---GFTCVGHCEVDTYADKNYRLLFDTEGEWYCSDARTI 88 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + + +PD D+L AGFPCQ FS AG Sbjct: 89 EPERMPDFDLLCAGFPCQAFSIAG 112 >gi|160939240|ref|ZP_02086591.1| hypothetical protein CLOBOL_04134 [Clostridium bolteae ATCC BAA-613] gi|158438203|gb|EDP15963.1| hypothetical protein CLOBOL_04134 [Clostridium bolteae ATCC BAA-613] Length = 366 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 + D F GIG RL LEQ C EI+ Y+ +YQA DI K Sbjct: 1 MYFLDFFAGIGLFRLGLEQA----GWTCKGHCEIDKYANMSYQAMHHIKEGEWFEEDITK 56 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + Q +PD D+ GFPCQ S AG Sbjct: 57 VSAQSLPDVDLWTGGFPCQDVSMAG 81 >gi|319757808|gb|ADV69750.1| hypothetical protein SSUJS14_0659 [Streptococcus suis JS14] Length = 424 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 L D F G+GG R LE +C E + ++ K+Y+A + DI I Sbjct: 3 LSFLDFFAGVGGFRRGLELA----GFKCIGYCEKDKFARKSYEAMYDTKGEWFHDDITSI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +P D+ AG PCQ S AG Sbjct: 59 DPTQLPKADLWTAGSPCQNVSIAG 82 >gi|311742739|ref|ZP_07716548.1| DNA (cytosine-5-)-methyltransferase [Aeromicrobium marinum DSM 15272] gi|311314367|gb|EFQ84275.1| DNA (cytosine-5-)-methyltransferase [Aeromicrobium marinum DSM 15272] Length = 428 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 11/86 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF GIGG L + EC ++SEI+ + K YQ N+ N + GDI + Sbjct: 8 FTFIDLFAGIGGFHAALSE----LGGECVYASEIDEAAAKIYQHNW-NMPVAGDI--VPE 60 Query: 62 QD----IPDHDVLLAGFPCQPFSQAG 83 D +P HDVL AGFPCQPFS++G Sbjct: 61 TDPVVKVPPHDVLAAGFPCQPFSKSG 86 >gi|109947509|ref|YP_664737.1| methylase [Helicobacter acinonychis str. Sheeba] gi|109714730|emb|CAJ99738.1| methylase [Helicobacter acinonychis str. Sheeba] Length = 177 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ LF GIGG E F E +++E++ + TY+ANF + L+ DI + Sbjct: 1 MEVGSLFAGIGGF----ECMFLQAGFEIGWANELDKDACNTYRANFKHKLLEQDIKDLNP 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ D ++ AGFPCQ FS AG Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78 >gi|227431785|ref|ZP_03913812.1| possible DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352468|gb|EEJ42667.1| possible DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 448 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKI 59 +K DLF GIGG RL LE++ + EI+ ++ ++YQA N DI K+ Sbjct: 1 MKFLDLFSGIGGFRLGLERSGH----TPVGYVEIDKFARQSYQAMYNTDGEWTAEDINKV 56 Query: 60 KTQDIPDHD----VLLAGFPCQPFSQAG 83 ++ + ++ GFPCQ FS AG Sbjct: 57 TDEEWRKFNGTVELIAGGFPCQSFSIAG 84 >gi|331270911|ref|YP_004385622.1| putative cytosine-specific DNA methylotransferase [Clostridium botulinum BKT015925] gi|329127303|gb|AEB77247.1| putative cytosine-specific DNA methylotransferase [Clostridium botulinum BKT015925] Length = 318 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 8/83 (9%) Query: 1 MLKITDLFCG--IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 + K +LF G +GG+ L ++ EC SE++ Y++K Y++NFPN + +GDI K Sbjct: 3 IFKYLELFAGSGLGGMVL------DNYGGECIGYSEVDKYAIKNYESNFPNKINYGDITK 56 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQ 81 I +++P D+L+ G PCQ S Sbjct: 57 INEKELPKFDLLIGGSPCQNISI 79 >gi|62390655|ref|YP_226057.1| modification methylase [Corynebacterium glutamicum ATCC 13032] gi|21324545|dbj|BAB99169.1| Site-specific DNA methylase or type II 5-cytosine methyltransferase [Corynebacterium glutamicum ATCC 13032] gi|41325993|emb|CAF20156.1| MODIFICATION METHYLASE [Corynebacterium glutamicum ATCC 13032] Length = 363 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 7/82 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61 I F G GG+ L L++ + ++++ + +V+TY+ N + ++ GDI +I Sbjct: 6 TIVSTFSGCGGLDLGLQE----VGFDPIWANDFSEEAVQTYKHNIGDHIVHGDITEIDPF 61 Query: 62 --QDIPDHDVLLAGFPCQPFSQ 81 IPD D++ GFPCQ FS Sbjct: 62 TDDTIPDGDLVTGGFPCQDFSM 83 >gi|326574028|gb|EGE23977.1| DcmB [Moraxella catarrhalis CO72] Length = 337 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +KI LF G GG+ L ++ + ++E + T++AN NT LI GDI I Sbjct: 1 MKIISLFSGCGGLDLGFKKA----GFKIAVANEYDKSIWATFKANHHNTKLIEGDIRHIL 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 +D P D D ++ G PCQ +S+AG Sbjct: 57 EEDFPNDIDGIIGGPPCQSWSEAG 80 >gi|218902126|ref|YP_002449960.1| cytosine-specific methyltransferase NlaX [Bacillus cereus AH820] gi|218538919|gb|ACK91317.1| cytosine-specific methyltransferase NlaX [Bacillus cereus AH820] Length = 350 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 K+ +F GIGG L +Q E +++E++ + TY+ + L D+ ++ Sbjct: 5 YKLGSMFAGIGGTCLGFQQA----GAEIVWANEVDRNASITYRHFWKGEYLQEADVTEVD 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IP D+L+ GFPCQ FS AG Sbjct: 61 KTTIPQLDILIGGFPCQAFSIAG 83 >gi|218248203|ref|YP_002373574.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|257060473|ref|YP_003138361.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|218168681|gb|ACK67418.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|256590639|gb|ACV01526.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 460 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDI 56 DLF GIGG R+ L +C SEI+ ++K YQ NF + FGDI Sbjct: 23 FTFIDLFAGIGGFRIAL----KSLGGKCLGFSEIDKQAIKVYQHNFINYLTSDEREFGDI 78 Query: 57 AKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 +I ++P + D+++ G PCQP+S AG Sbjct: 79 TQIP--NLPQNVDIIVGGVPCQPWSVAG 104 >gi|291543181|emb|CBL16291.1| Site-specific DNA methylase [Ruminococcus bromii L2-63] Length = 149 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ D+F GIGG R LE EC EI+ Y+ + Y+A + L F D KI Sbjct: 3 IRYFDMFAGIGGFRSGLEAIG---GFECVGYCEIDKYAKQAYEAMYDTGGELYFDDARKI 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +PD D+L+ GFPCQ FS AG Sbjct: 60 VLEQLPDFDLLVGGFPCQSFSIAG 83 >gi|1808696|gb|AAC00045.1| putative type II 5-cytosoine methyltransferase [Corynebacterium glutamicum] Length = 363 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 7/82 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61 I F G GG+ L L++ + ++++ + +V+TY+ N + ++ GDI +I Sbjct: 6 TIVSTFSGCGGLDLGLQE----VGFDPIWANDFSEEAVQTYKHNIGDHIVHGDITEIDPF 61 Query: 62 --QDIPDHDVLLAGFPCQPFSQ 81 IPD D++ GFPCQ FS Sbjct: 62 TDDTIPDGDLVTGGFPCQDFSM 83 >gi|82752078|ref|YP_417819.1| DNA modification methylase [Staphylococcus aureus RF122] gi|82657609|emb|CAI82057.1| DNA modification methylase [Staphylococcus aureus RF122] Length = 402 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 4/78 (5%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDIP 65 F G+GGI L QT +++E + + TY+ NF N L DI +KT +IP Sbjct: 18 FFSGVGGIELGFHQTNK---FRVVYANEFDKNAQITYENNFNNVSLDCRDIHDVKTSEIP 74 Query: 66 DHDVLLAGFPCQPFSQAG 83 DV++ GFPCQ FS AG Sbjct: 75 MSDVIVGGFPCQAFSIAG 92 >gi|153854028|ref|ZP_01995361.1| hypothetical protein DORLON_01352 [Dorea longicatena DSM 13814] gi|149753410|gb|EDM63341.1| hypothetical protein DORLON_01352 [Dorea longicatena DSM 13814] Length = 468 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 ++ DLF GIGG R L + N C E++ Y+ K Y+ F D I Sbjct: 43 IQFFDLFSGIGGFREGLRRAG---NFVCVGHCEVDTYADKNYRLLFDTEGEWYCNDTRTI 99 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + + +PD D+L AGFPCQ FS AG Sbjct: 100 EPERMPDFDLLCAGFPCQAFSIAG 123 >gi|325270473|ref|ZP_08137075.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM 16608] gi|324987196|gb|EGC19177.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM 16608] Length = 365 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 7/86 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 K+ LFCG GG L + F + E ++ + + ++V TY NF + + Sbjct: 6 YKVASLFCGCGGSDLGIVGGFEYLGKRYDELPFEIAYAVDFDKWAVDTYNKNFRHKAVCA 65 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFS 80 D+ ++ + D DVL+ GFPCQ FS Sbjct: 66 DVTEVDFDETADVDVLIGGFPCQSFS 91 >gi|183983894|ref|YP_001852185.1| phage DNA methylase [Mycobacterium marinum M] gi|183177220|gb|ACC42330.1| conserved hypothetical phage DNA methylase [Mycobacterium marinum M] Length = 291 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++I LF G GG+ L +E F + E +P + K ++P GD+ +I Sbjct: 4 MRIGSLFSGAGGLDLAVEHIF---GATVAWHCENDPAASKVLAHHWPGVPNLGDVTEIDW 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + D+L G+PCQPFS AG Sbjct: 61 AQVEPVDILCGGWPCQPFSLAG 82 >gi|291543286|emb|CBL16395.1| DNA-methyltransferase (dcm) [Ruminococcus sp. 18P13] Length = 369 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 5/82 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIKT 61 DL GIGG L T + C +EI+ + K Y A + L +GD+ I Sbjct: 5 FIDLCSGIGGFHSGLVNTGH---YRCVGHAEIDKNAEKAYNAIYGEEGGLNYGDLRTINP 61 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +++P D+L GFPCQ FS AG Sbjct: 62 RELPHFDLLCGGFPCQSFSVAG 83 >gi|210614083|ref|ZP_03290039.1| hypothetical protein CLONEX_02252 [Clostridium nexile DSM 1787] gi|210150861|gb|EEA81869.1| hypothetical protein CLONEX_02252 [Clostridium nexile DSM 1787] Length = 244 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 5/78 (6%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKIKTQDIP 65 F GIGG R L + C EI+ Y+ ++Y+A F D KI+ +++P Sbjct: 2 FSGIGGFREGLNRAG---GFSCVGHCEIDKYADRSYRAIFNTEGEWFCNDAKKIRPEELP 58 Query: 66 DHDVLLAGFPCQPFSQAG 83 + D+L GFPCQ FS AG Sbjct: 59 EFDLLCGGFPCQAFSVAG 76 >gi|260909972|ref|ZP_05916659.1| modification methylase EcoRII [Prevotella sp. oral taxon 472 str. F0295] gi|260635922|gb|EEX53925.1| modification methylase EcoRII [Prevotella sp. oral taxon 472 str. F0295] Length = 370 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 18/96 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 DLF GIGG + +C F+SE + + +Y+AN+ + Sbjct: 6 FTFIDLFAGIGGFHTAMRS----VGGKCVFASEWDKNARLSYEANYIESEPHLFKKGGNG 61 Query: 54 ------GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI ++P+ D+ GFPCQPFS AG Sbjct: 62 QYLYFNEDINHAIPSEMPNFDICCGGFPCQPFSVAG 97 >gi|296114087|ref|YP_003628025.1| cytosine-specific methyltransferase [Moraxella catarrhalis RH4] gi|295921781|gb|ADG62132.1| cytosine-specific methyltransferase [Moraxella catarrhalis RH4] gi|326560672|gb|EGE11040.1| cytosine-specific methyltransferase [Moraxella catarrhalis 46P47B1] Length = 318 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA-KIK 60 DLF G+GG ++ EC F+SE + + KTY AN + +GDI Sbjct: 4 FTFIDLFAGVGGFHFAMQA----VGGECVFASEWDLNAKKTYFANHG-FVPYGDITLDET 58 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 + IP + DVL AGFPCQ FS AG Sbjct: 59 KEKIPQNFDVLCAGFPCQAFSVAG 82 >gi|322510834|gb|ADX06148.1| putative C-5 cytosine-specific DNA methyltransferase [Organic Lake phycodnavirus 1] Length = 344 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLFCGIG +F +C S +I+ +TY++N+ L GDI +I+ Sbjct: 69 IKFIDLFCGIGSFHY----SFKKLGWDCVMSCDIDKAVKETYKSNYG-ILPLGDITEIEP 123 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++I ++D+L AGFPCQPFSQ G Sbjct: 124 KNITNYDILCAGFPCQPFSQCG 145 >gi|313123965|ref|YP_004034224.1| modification methylase rho11Si family protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280528|gb|ADQ61247.1| Modification methylase Rho11sI family protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 349 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKI 59 +K DLF GIGG LE+ + C E + ++ ++YQA + ++ DI + Sbjct: 1 MKFIDLFAGIGGFHTGLEKAGH----TCVGWVEWDKFARQSYQAIYDTDGLYTATDIQDV 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K D+PD D+ G PC S AG Sbjct: 57 KGVDLPDADLWTFGSPCTDISLAG 80 >gi|91976449|ref|YP_569108.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB5] gi|91682905|gb|ABE39207.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB5] Length = 490 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF GIGG E EI+ + + ++P T +F DI KI Sbjct: 27 LRVASLFAGIGGFDKAFESVSAS----VVAQCEIDSFCRAVLRRHWPQTKLFEDITKINP 82 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 + P D+ AGFPCQ S A Sbjct: 83 AEFPAADIWTAGFPCQDVSLA 103 >gi|20385949|gb|AAM21516.1|AF438205_2 GST-M.SPRX methyltransferase fusion protein [Mutation screening vector pSPRX] Length = 659 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 L++ LF GIGG L E SEI+ Y+VK++ N L FGD++KI Sbjct: 230 LRVMSLFSGIGGFEAALRNIG--VGYELVGFSEIDKYAVKSFCAIHNVDEQLNFGDVSKI 287 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +P+ D+L+ G PCQ FS AG Sbjct: 288 DKKKLPEFDILVGGSPCQSFSVAG 311 >gi|291530602|emb|CBK96187.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3] Length = 369 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 5/82 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIKT 61 DL GIGG L T + C +EI+ + K Y A + L +GD+ I Sbjct: 5 FIDLCSGIGGFHSGLVNTGH---YRCVGHAEIDKNAEKAYNAIYGEEGGLNYGDLRTINP 61 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +++P D+L GFPCQ FS AG Sbjct: 62 RELPHFDLLCGGFPCQSFSVAG 83 >gi|157311261|ref|YP_001469305.1| gp72 [Mycobacterium phage Tweety] gi|148540890|gb|ABQ86141.1| gp72 [Mycobacterium phage Tweety] Length = 370 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++I LF G GG+ L +E+ F + EI+P + K +P+ FG + I Sbjct: 1 MRIGSLFSGAGGLDLAVEEVF---GGRTVWHCEIDPAASKVLAHRWPSVPNFGSVTDIDW 57 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + DVL GFPCQ S AG Sbjct: 58 STVEPVDVLCGGFPCQDLSCAG 79 >gi|228911341|ref|ZP_04075144.1| Phage-related DNA methylase [Bacillus thuringiensis IBL 200] gi|228848278|gb|EEM93129.1| Phage-related DNA methylase [Bacillus thuringiensis IBL 200] Length = 236 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 L D F G+GG RL +EQ + C E + ++ +Y+ N DI I Sbjct: 3 LTFLDFFSGVGGFRLGMEQAKH----RCIGYVEWDKFARASYEAIHNTEGEWTNHDINNI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 K+ IP DV GFPC S A Sbjct: 59 KSGTIPKADVWCFGFPCTDISIA 81 >gi|160894995|ref|ZP_02075769.1| hypothetical protein CLOL250_02545 [Clostridium sp. L2-50] gi|156863426|gb|EDO56857.1| hypothetical protein CLOL250_02545 [Clostridium sp. L2-50] Length = 447 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 ++ DLF GIGG R L + C E + Y+ Y+ F D I Sbjct: 20 IRFFDLFSGIGGFREGLHRAG---GFTCVGHCEADAYADHNYRVLFDTEGEWFCNDARNI 76 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +T+ +PD D+L AGFPCQ FS AG Sbjct: 77 ETERMPDFDLLCAGFPCQAFSIAG 100 >gi|325294602|ref|YP_004281116.1| DNA-cytosine methyltransferase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065050|gb|ADY73057.1| DNA-cytosine methyltransferase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 342 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 ++I LF G GG+ L E ++++ + +TY NFP T L D+ I Sbjct: 1 MEIVSLFSGCGGLDLGFELA----GFSIVWANDNDKDVWETYTRNFPGTYLDKRDLRVIP 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPD ++ G PCQ +S+AG Sbjct: 57 VSDIPDCVGIIGGPPCQSWSEAG 79 >gi|261252209|ref|ZP_05944782.1| DNA-cytosine methyltransferase [Vibrio orientalis CIP 102891] gi|260935600|gb|EEX91589.1| DNA-cytosine methyltransferase [Vibrio orientalis CIP 102891] Length = 584 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 50/116 (43%), Gaps = 38/116 (32%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLI------ 52 DLF GIGG+R E +C F+SE + + +TY AN + L Sbjct: 95 FTFIDLFAGIGGLRRGFE----DIGGKCRFTSEWDDKARRTYLANHYVDKDELPYFLDES 150 Query: 53 ---------FGDIAKIKT----------------QDIPDHDVLLAGFPCQPFSQAG 83 F DI KI + IP+HDVLLAGFPCQPFS AG Sbjct: 151 TENPMKNRDFMDITKITLSGESSVSEKEKLNHIRKHIPEHDVLLAGFPCQPFSLAG 206 >gi|91201234|emb|CAJ74294.1| similar to site-specific DNA-methyltransferase (cytosine-specific) [Candidatus Kuenenia stuttgartiensis] Length = 313 Score = 109 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 + + LF G GG+ L F+ E +++E++ + +TY+ N ++ G Sbjct: 8 ITVVSLFAGCGGMDLGFSGGFDFLGVHYARTQFEIIWANELSGAACRTYRKNIGQHIVEG 67 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI + ++ + DV++ GFPCQ S G Sbjct: 68 DIWQAISEMPKNADVVIGGFPCQDISVNG 96 >gi|253569226|ref|ZP_04846636.1| cytosine-specific DNA methylase [Bacteroides sp. 1_1_6] gi|251841245|gb|EES69326.1| cytosine-specific DNA methylase [Bacteroides sp. 1_1_6] Length = 448 Score = 109 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF G+GG L LE+ +C F+SE+ + Y N GDI ++ Sbjct: 4 YRFIDLFAGLGGFHLALEK----LGCKCVFASELQQELQELYYLNHG-IKCHGDINQVNI 58 Query: 62 -QDIPDHDVLLAGFPCQPFSQAG 83 DIP HD+L AGFPCQPFS+AG Sbjct: 59 KNDIPSHDILCAGFPCQPFSKAG 81 >gi|305666023|ref|YP_003862310.1| putative DNA modification methylase [Maribacter sp. HTCC2170] gi|88710798|gb|EAR03030.1| putative DNA modification methylase (N.MgoV) [Maribacter sp. HTCC2170] Length = 493 Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 8/84 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 DLF GIGG RL L++ EC SEIN ++ Y NF + + G+I KI Sbjct: 4 FSFIDLFSGIGGFRLGLQR----NGGECIGFSEINKDAIDFYCENFGDDRSENLGNITKI 59 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +++P HD+L AG PCQ +S AG Sbjct: 60 --ENLPQHDLLTAGVPCQSWSIAG 81 >gi|153007575|ref|YP_001368790.1| DNA (cytosine-5-)-methyltransferase [Ochrobactrum anthropi ATCC 49188] gi|151559463|gb|ABS12961.1| DNA (cytosine-5-)-methyltransferase [Ochrobactrum anthropi ATCC 49188] Length = 283 Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 7/86 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ DLF GIGG L LE+T E EI + + ++P + D+ ++ Sbjct: 4 LRVLDLFSGIGGFSLGLERTG---GFETVAFCEIEEFPRRVLAKHWPEVPCYHDVRELTA 60 Query: 62 QDIPD----HDVLLAGFPCQPFSQAG 83 + DV+ GFPCQ S AG Sbjct: 61 AKLASDGIAIDVICGGFPCQDISTAG 86 >gi|194335797|ref|YP_002017591.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme BU-1] gi|194308274|gb|ACF42974.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme BU-1] Length = 434 Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 L++ DLF G GG+ F H ++++ N + ++Y ANF + GDI I Sbjct: 35 LRVIDLFAGAGGLSAGFSHFFGHH-FTPVWANDFNSCAAESYNANFGHHCRVGDIVDILD 93 Query: 60 -KTQDIPDHDVLLAGFPCQPFSQ 81 T IP DV++ G PCQ FS Sbjct: 94 NPTTIIPKADVVIGGPPCQGFSL 116 >gi|317014507|gb|ADU81943.1| type II DNA modification (methyltransferase) [Helicobacter pylori Gambia94/24] Length = 318 Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLERC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD DVL++GFPCQ FS G Sbjct: 59 PNDLPDFDVLVSGFPCQAFSING 81 >gi|86142380|ref|ZP_01060890.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella blandensis MED217] gi|85831132|gb|EAQ49589.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella blandensis MED217] Length = 332 Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 LK DLF G GG L +++ + FS +I P +TY NFP + LI DI +K Sbjct: 5 LKYIDLFSGAGGFSLGF----DNKGFQNVFSVDIEPSFCETYNHNFPSHNLIHKDICDVK 60 Query: 61 TQDIP------DHDVLLAGFPCQPFSQAG 83 ++ + DV++ G PCQ FS AG Sbjct: 61 DAELKYLKEYDEIDVVIGGPPCQGFSIAG 89 >gi|225375779|ref|ZP_03753000.1| hypothetical protein ROSEINA2194_01411 [Roseburia inulinivorans DSM 16841] gi|225212376|gb|EEG94730.1| hypothetical protein ROSEINA2194_01411 [Roseburia inulinivorans DSM 16841] Length = 431 Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 ++ DLF GIGG R L + N C E++ Y+ K YQ F D I Sbjct: 6 IQFFDLFSGIGGFREGLRRAG---NFVCVGHCEVDTYADKNYQLLFDTEGEWYCNDARTI 62 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + + +PD D+L AGFPCQ FS AG Sbjct: 63 EPERMPDFDLLCAGFPCQAFSIAG 86 >gi|154497795|ref|ZP_02036173.1| hypothetical protein BACCAP_01773 [Bacteroides capillosus ATCC 29799] gi|150273293|gb|EDN00438.1| hypothetical protein BACCAP_01773 [Bacteroides capillosus ATCC 29799] Length = 222 Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAKIKTQDI 64 F GIGG R L + +C EI+ Y+ +Y+A + D +I D+ Sbjct: 2 FAGIGGFRAGLARAG---GFQCVGHCEIDKYADASYRAIHDIREEERYYPDAREIDPGDL 58 Query: 65 PDHDVLLAGFPCQPFSQAG 83 PD D+L GFPCQ FS AG Sbjct: 59 PDFDLLCGGFPCQAFSLAG 77 >gi|26554428|ref|NP_758362.1| cytosine-specific DNA methylase [Mycoplasma penetrans HF-2] gi|26454438|dbj|BAC44766.1| cytosine-specific DNA methylase [Mycoplasma penetrans HF-2] Length = 426 Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 5/87 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFP-NTLIFGDIAK 58 +K DLF GIGG LE+ N EC F SEI+ ++KTY +NF + +I Sbjct: 4 IKFIDLFAGIGGFHKALERVAKKNNFNIECVFVSEIDNEAIKTYSSNFSVDKEKIINIRD 63 Query: 59 IK--TQDIPDHDVLLAGFPCQPFSQAG 83 + +PDHD L AGFPCQ FS AG Sbjct: 64 LDESASQVPDHDFLFAGFPCQTFSNAG 90 >gi|15612115|ref|NP_223767.1| type II DNA modification (methyltransferase [Helicobacter pylori J99] gi|4155654|gb|AAD06642.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter pylori J99] Length = 321 Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLERC----HLKCVGHAEINHEAIRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+P+ DVL++GFPCQ FS G Sbjct: 59 PNDLPNFDVLVSGFPCQAFSING 81 >gi|207109252|ref|ZP_03243414.1| putative site-specific DNA-methyltransferase [Helicobacter pylori HPKX_438_CA4C1] Length = 210 Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L DLF GIGG RL L + ++C FS+E NP+++ Y+ANF + DI + Sbjct: 29 LLTYADLFAGIGGFRLAL----DSLGLKCVFSAENNPHAIAMYKANFNDDSTC-DITILN 83 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +P+ D+L AGFPCQ FS G Sbjct: 84 PNTMPNFDILCAGFPCQAFSVCG 106 >gi|76788592|ref|YP_329366.1| prophage LambdaSa04, methyltransferase C-5 [Streptococcus agalactiae A909] gi|76563649|gb|ABA46233.1| prophage LambdaSa04, methyltransferase, C-5 cytosine-specific family [Streptococcus agalactiae A909] Length = 417 Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 L D F G+GG R LE + C E + ++ K+Y+A + DI I Sbjct: 3 LTFLDFFAGVGGFRRGLELA----GMTCLGYCEKDKFARKSYEAMYDTEGEWFHDDITSI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +P D+ AG PCQ S AG Sbjct: 59 DPTRLPKADLWTAGSPCQNLSIAG 82 >gi|314940603|ref|ZP_07847734.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|313640209|gb|EFS04790.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] Length = 83 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 ++ DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + DI + Sbjct: 1 MRFLDLFAGIGGFRLGMEQASHH----CIGFCEIDKFARRSYKAIHDTSKEVEMHDITSV 56 Query: 60 KTQDIPD---HDVLLAGFPCQPFSQAG 83 + I D+L GFPCQ FS AG Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83 >gi|317009733|gb|ADU80313.1| type II DNA modification enzyme [Helicobacter pylori India7] Length = 318 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD DVL++GFPCQ FS G Sbjct: 59 PNDLPDFDVLISGFPCQAFSING 81 >gi|163937935|ref|YP_001642821.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis KBAB4] gi|163865790|gb|ABY46846.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis KBAB4] Length = 444 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K LF GIGG EQ N + C +SE++ Y+ Y+ + + GDI K+++ Sbjct: 9 FKYVSLFSGIGGF----EQALNGKGGICVMASEVDKYANTAYELIYGKKTV-GDITKVRS 63 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+P HD+L AGFPC FS AG Sbjct: 64 MDVPRHDILTAGFPCPTFSVAG 85 >gi|294083958|ref|YP_003550715.1| cytosine-specific methyltransferase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663530|gb|ADE38631.1| Cytosine-specific methyltransferase [Candidatus Puniceispirillum marinum IMCC1322] Length = 407 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI- 59 MLK DL GIGG L E + + + + K ++P+ I D+ ++ Sbjct: 1 MLKHLDLASGIGGFSLGFEWAGLS---QPIMFCDTDEWCRKVLNKHWPDVPIVNDVKELA 57 Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83 + IPDHD+L AG+PCQPFS AG Sbjct: 58 NEPSQIPDHDILSAGYPCQPFSVAG 82 >gi|325298704|ref|YP_004258621.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] gi|324318257|gb|ADY36148.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] Length = 399 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 45/96 (46%), Gaps = 13/96 (13%) Query: 1 MLKIT-DLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQAN-----F 47 M KI LF G GG+ L F R E F+++ + + Y AN Sbjct: 1 MPKIIASLFSGCGGLDLGFTGGFTFRGQFYDRLNTEILFANDFDQDAQSCYNANPLLTNN 60 Query: 48 PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + DI I +IPD D+LLAGFPCQPFS AG Sbjct: 61 GANCLLADIRDIDANEIPDFDILLAGFPCQPFSNAG 96 >gi|332655061|ref|ZP_08420802.1| modification methylase NgoFVII (Cytosine-specificmethyltransferase NgoFVII) (M.NgoFVII) (M.NgoVII) [Ruminococcaceae bacterium D16] gi|332515921|gb|EGJ45530.1| modification methylase NgoFVII (Cytosine-specificmethyltransferase NgoFVII) (M.NgoFVII) (M.NgoVII) [Ruminococcaceae bacterium D16] Length = 369 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 7/82 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61 K+ +F G GG+ L + ++++ ++VK+++ANF + + + DI KI Sbjct: 12 KVVSIFSGCGGLDLGF----HMEGYNTIWANDFAEWAVKSFRANFGDVIKYEDITKINPY 67 Query: 62 --QDIPDHDVLLAGFPCQPFSQ 81 + IP+ D++L GFPCQ FS Sbjct: 68 EDKSIPECDLVLGGFPCQDFSI 89 >gi|153940750|ref|YP_001392502.1| hypothetical protein CLI_3290 [Clostridium botulinum F str. Langeland] gi|152936646|gb|ABS42144.1| conserved domain protein [Clostridium botulinum F str. Langeland] Length = 338 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 L D F G+GG R +E + +C E + ++ +Y+ + DI Sbjct: 3 LTFIDFFAGVGGFRKGMEMADH----KCVGHCEWDKFANMSYKEIHSPKEDEWFGTDIRN 58 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 +K ++P D GFPCQ S AG Sbjct: 59 VKATELPRADCWCFGFPCQDISVAG 83 >gi|300867442|ref|ZP_07112096.1| Modification methylase MthTI [Oscillatoria sp. PCC 6506] gi|300334557|emb|CBN57264.1| Modification methylase MthTI [Oscillatoria sp. PCC 6506] Length = 350 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 5/81 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQ 62 I LF G GG+ L Q ++SE + +TY+ N P+T + DI I + Sbjct: 9 IVALFSGCGGLDLGFSQA----GFNVIWASEYDKDIWETYENNHPDTFLDKRDIRAISSA 64 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +IPD ++ G PCQ +S+AG Sbjct: 65 EIPDCTGIIGGSPCQSWSEAG 85 >gi|56899928|ref|YP_173301.1| phage-related DNA methylase, N-terminal region [Bacillus thuringiensis serovar konkukian str. 97-27] gi|56800362|gb|AAW31029.1| phage-related DNA methylase, N-terminal region [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 239 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 L D F GIGG RL +E+ + +C E + ++ K+Y+ N DI I Sbjct: 3 LTFIDFFAGIGGFRLGMEEASH----KCIGYVEWDKFARKSYESIHNTRGEWTEHDINNI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 IP DV GFPC S A Sbjct: 59 IPGAIPKADVWTFGFPCTDISIA 81 >gi|19552978|ref|NP_600980.1| site-specific DNA methylase or [Corynebacterium glutamicum ATCC 13032] Length = 356 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 7/77 (9%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT---QDI 64 F G GG+ L L++ + ++++ + +V+TY+ N + ++ GDI +I I Sbjct: 4 FSGCGGLDLGLQE----VGFDPIWANDFSEEAVQTYKHNIGDHIVHGDITEIDPFTDDTI 59 Query: 65 PDHDVLLAGFPCQPFSQ 81 PD D++ GFPCQ FS Sbjct: 60 PDGDLVTGGFPCQDFSM 76 >gi|29566487|ref|NP_818053.1| gp80 [Mycobacterium phage Che9d] gi|29425212|gb|AAN07998.1| gp80 [Mycobacterium phage Che9d] Length = 252 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 + + LF GIGG+ L LE+ + EINPY + ++P+ D+ Sbjct: 1 MNVLSLFSGIGGLELGLERA----GMTVVGQVEINPYCRQILAKHWPHVPRHDDVRTTVE 56 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++++ P D++ GFPCQ S AG Sbjct: 57 WWESEERPRVDLICGGFPCQDISNAG 82 >gi|206600250|ref|YP_002241856.1| gp69 [Mycobacterium phage Ramsey] gi|206287338|gb|ACI12681.1| gp69 [Mycobacterium phage Ramsey] Length = 447 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF G GG+ + +EQ F + E+NP + K +P GDI + Sbjct: 1 MKIGSLFSGAGGLDIAVEQFF---GARTVWHCELNPDASKVLAHRWPGVPNLGDITAVDW 57 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + D+L GFPCQ S AG Sbjct: 58 STVEPVDILAGGFPCQDVSAAG 79 >gi|307637790|gb|ADN80240.1| DNA-cytosine methyl transferase [Helicobacter pylori 908] gi|325996388|gb|ADZ51793.1| DNA-cytosine methyltransferase [Helicobacter pylori 2018] gi|325997976|gb|ADZ50184.1| Type II DNA modification enzyme/ methyltransferase [Helicobacter pylori 2017] Length = 318 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLERC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD DVL++GFPCQ FS G Sbjct: 59 PNDLPDFDVLVSGFPCQAFSING 81 >gi|78778049|ref|YP_394364.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM 1251] gi|78498589|gb|ABB45129.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM 1251] Length = 435 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 7/88 (7%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINP-----YSVKTYQANFP-NTLIFG 54 ++ +LF G+GG RL LE+T +++ +S++ P ++ Y A F Sbjct: 26 IRTVELFAGVGGFRLGLEKTSLENKSYSVVWSNQWEPSTKTQHASDIYCARFGYENHSND 85 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI+ + IPDHD+L+ GFPCQ +S A Sbjct: 86 DISTVDASVIPDHDLLVGGFPCQDYSVA 113 >gi|157311258|ref|YP_001469302.1| gp69 [Mycobacterium phage Tweety] gi|148540887|gb|ABQ86138.1| gp69 [Mycobacterium phage Tweety] Length = 261 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF G GG+ + +EQ F + E+NP + K +P GDI + Sbjct: 1 MKIGSLFSGAGGLDIAVEQFF---GARTVWHCELNPAAAKVLAHRWPGVPNLGDITAVDW 57 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + D+L GFPCQ S AG Sbjct: 58 STVEPVDILAGGFPCQDVSAAG 79 >gi|160893669|ref|ZP_02074453.1| hypothetical protein CLOL250_01223 [Clostridium sp. L2-50] gi|156864654|gb|EDO58085.1| hypothetical protein CLOL250_01223 [Clostridium sp. L2-50] Length = 573 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+ + LF GIGG L H ++SEI P+ ++ + FP+ + GDI K+ Sbjct: 1 MMTLGSLFDGIGGFPL----AAVHCGGVPVWASEIEPFPMRVTKLRFPDMIHVGDITKLD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +P DV+ G PCQ S AG Sbjct: 57 GAKLPPVDVICGGSPCQDLSVAG 79 >gi|289422787|ref|ZP_06424624.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus anaerobius 653-L] gi|289156786|gb|EFD05414.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus anaerobius 653-L] Length = 536 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M DLF G GG+ L QT + + + E NP +TY+ N P +FGD+ Sbjct: 1 MFNTIDLFAGAGGLSLGFMQT---KKFDIKVAYEFNPSMQETYKKNHPGVAVFGDVRDAN 57 Query: 61 TQDIP----DHDVLLAGFPCQPFSQA 82 +I D DV++ G PCQ FS A Sbjct: 58 YAEIKEKYGDIDVVIGGPPCQGFSNA 83 >gi|303231468|ref|ZP_07318199.1| modification methylase HhaI family protein [Veillonella atypica ACS-049-V-Sch6] gi|302513905|gb|EFL55916.1| modification methylase HhaI family protein [Veillonella atypica ACS-049-V-Sch6] Length = 411 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 I F G+GGI L EQT +++E + + TY+ NFP+ L DI + Sbjct: 9 YTIAAFFSGVGGIELGFEQTNK---FRVVYANEFDKNANITYKLNFPDIQLDNRDIHIVS 65 Query: 61 TQDI--PDHDVLLAGFPCQPFSQAG 83 + DI DV++ GFPCQ FS AG Sbjct: 66 SSDIKTEKIDVIVGGFPCQAFSIAG 90 >gi|309389435|gb|ADO77315.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228] Length = 328 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 38/90 (42%), Positives = 46/90 (51%), Gaps = 11/90 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKI 59 ML DLF G GG+ E+ E FS E NP +TY+ NFP N LI DIA I Sbjct: 1 MLNYIDLFSGAGGMSCGFEKA----GFENIFSLEFNPEFAETYKKNFPKNNLIVKDIADI 56 Query: 60 KTQDIP------DHDVLLAGFPCQPFSQAG 83 ++ D DV++ G PCQ FS AG Sbjct: 57 SEPEVKKIIGETDVDVIVGGPPCQGFSLAG 86 >gi|166368611|ref|YP_001660884.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] gi|166090984|dbj|BAG05692.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] Length = 464 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDI 56 + DLF GIGG R+ LE+ C SEI+ +++ YQ NF N + FGD+ Sbjct: 32 YRFIDLFAGIGGFRIALEK----LGGRCLGYSEIDKQAIQVYQQNFISYLNSNEIAFGDV 87 Query: 57 AKIKTQDIPDH-DVLLAGFPCQPFSQAG 83 +KI ++PD+ D ++ G PCQP+S AG Sbjct: 88 SKI--SNLPDNLDFIVGGVPCQPWSVAG 113 >gi|281424544|ref|ZP_06255457.1| modification methylase NgoFVII [Prevotella oris F0302] gi|281401381|gb|EFB32212.1| modification methylase NgoFVII [Prevotella oris F0302] Length = 131 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ LF G GG+ L EQ + + ++++ + +T++ +F + ++ GDI +I Sbjct: 6 IRVVSLFSGCGGLDLGFEQVGD---YKTLWANDFKHEACQTFRRHFGDIIVEGDIEQIDP 62 Query: 62 QD---IPDHDVLLAGFPCQPFSQ 81 + +PD D++L GFPCQ FS Sbjct: 63 YNNFSVPDCDLVLGGFPCQDFSI 85 >gi|315657354|ref|ZP_07910236.1| modification methylase NgoPII [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491826|gb|EFU81435.1| modification methylase NgoPII [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 355 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 + + LF G GG+ L EQ ++E +P +T++AN P+T I GDI + Sbjct: 1 MNVISLFSGCGGLDLGFEQA----GFNIPVANEFDPTIYETFKANHPHTHLIEGDIRGVT 56 Query: 61 TQDIP-----DHDVLLAGFPCQPFSQAG 83 +DI + D ++ G PCQ +S+AG Sbjct: 57 IEDIAPFVDGEVDGIIGGPPCQSWSEAG 84 >gi|304390097|ref|ZP_07372051.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326579|gb|EFL93823.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 355 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 + + LF G GG+ L EQ ++E +P +T++AN P+T I GDI + Sbjct: 1 MNVISLFSGCGGLDLGFEQA----GFNIPVANEFDPTIYETFKANHPHTHLIEGDIRGVT 56 Query: 61 TQDIP-----DHDVLLAGFPCQPFSQAG 83 +DI + D ++ G PCQ +S+AG Sbjct: 57 IEDIAPFVDGEVDGIIGGPPCQSWSEAG 84 >gi|308183225|ref|YP_003927352.1| type II DNA modification enzyme [Helicobacter pylori PeCan4] gi|308065410|gb|ADO07302.1| type II DNA modification enzyme [Helicobacter pylori PeCan4] Length = 318 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLERC----HLKCVGHAEINDEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+P+ DVL++GFPCQ FS G Sbjct: 59 PNDLPNFDVLVSGFPCQAFSING 81 >gi|298346143|ref|YP_003718830.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC 43063] gi|298236204|gb|ADI67336.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC 43063] Length = 355 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 + + LF G GG+ L EQ ++E +P +T++AN P+T I GDI + Sbjct: 1 MNVISLFSGCGGLDLGFEQA----GFNIPVANEFDPTIYETFKANHPHTHLIEGDIRGVT 56 Query: 61 TQDIP-----DHDVLLAGFPCQPFSQAG 83 +DI + D ++ G PCQ +S+AG Sbjct: 57 IEDIAPFVDGEVDGIIGGPPCQSWSEAG 84 >gi|167751790|ref|ZP_02423917.1| hypothetical protein ALIPUT_00030 [Alistipes putredinis DSM 17216] gi|167660688|gb|EDS04818.1| hypothetical protein ALIPUT_00030 [Alistipes putredinis DSM 17216] Length = 318 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + LF GIGG L E C EI+P+ K + +FPN + DI Sbjct: 1 MTHASLFSGIGGFDLAAEWAGWTNAFNC----EIDPFCRKVLKYHFPNAEQYEDIRTTDF 56 Query: 62 QDIPD-HDVLLAGFPCQPFSQAG 83 D DVL GFPCQPFS AG Sbjct: 57 TVWKDRIDVLTGGFPCQPFSLAG 79 >gi|163938820|ref|YP_001643704.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis KBAB4] gi|163861017|gb|ABY42076.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis KBAB4] Length = 350 Score = 107 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 K+ +F GIGG L +Q E +++E++ + TY+ + L D+ ++ Sbjct: 5 YKLGSMFAGIGGTCLGFQQA----GAEIVWANEVDRNASITYRHFWKGEYLQEADVTEVD 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 I D+L+ GFPCQ FS AG Sbjct: 61 KTTISQLDILIGGFPCQAFSIAG 83 >gi|240118874|ref|ZP_04732936.1| DcmB [Neisseria gonorrhoeae PID1] Length = 325 Score = 107 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 6/78 (7%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDIP- 65 F G GG+ L E+ E ++E + T++AN P LI GDI KIK +D P Sbjct: 2 FSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIKEEDFPE 57 Query: 66 DHDVLLAGFPCQPFSQAG 83 + D ++ G PCQ +S+AG Sbjct: 58 EIDGIIGGPPCQSWSEAG 75 >gi|240081638|ref|ZP_04726181.1| DcmB [Neisseria gonorrhoeae FA19] gi|240113919|ref|ZP_04728409.1| DcmB [Neisseria gonorrhoeae MS11] gi|240116652|ref|ZP_04730714.1| DcmB [Neisseria gonorrhoeae PID18] gi|240129088|ref|ZP_04741749.1| DcmB [Neisseria gonorrhoeae SK-93-1035] Length = 325 Score = 107 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 6/78 (7%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDIP- 65 F G GG+ L E+ E ++E + T++AN P LI GDI KIK +D P Sbjct: 2 FSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIKEEDFPE 57 Query: 66 DHDVLLAGFPCQPFSQAG 83 + D ++ G PCQ +S+AG Sbjct: 58 EIDGIIGGPPCQSWSEAG 75 >gi|317011319|gb|ADU85066.1| type II DNA modification enzyme [Helicobacter pylori SouthAfrica7] Length = 321 Score = 107 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLERC----HLKCVGHAEINDEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+P+ DVL++GFPCQ FS G Sbjct: 59 PNDLPNFDVLISGFPCQAFSING 81 >gi|291568714|dbj|BAI90986.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39] Length = 406 Score = 107 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ LF G GG+ L + E ++ + N + +T++ N T+ +I +I Sbjct: 17 KLVSLFSGCGGMDLPFHRA----GFEVVWAIDCNGAACRTFRRNISETIACNNIQEIDIT 72 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +P D++ GFPCQ FS G Sbjct: 73 KVPKADLITGGFPCQDFSMIG 93 >gi|159026722|emb|CAO89036.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 455 Score = 107 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDI 56 + DLF GIGG R+ LE+ C SEI+ +++ YQ NF + + FGD+ Sbjct: 24 YRFVDLFAGIGGFRIALEK----LGGRCLGYSEIDKQAIQVYQQNFISYLNSDEIAFGDV 79 Query: 57 AKIKTQDIPDH-DVLLAGFPCQPFSQAG 83 +KI ++PD+ D+++ G PCQP+S AG Sbjct: 80 SKI--SNLPDNLDLIVGGVPCQPWSVAG 105 >gi|308235652|ref|ZP_07666389.1| DcmB [Gardnerella vaginalis ATCC 14018] gi|311115197|ref|YP_003986418.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis ATCC 14019] gi|310946691|gb|ADP39395.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis ATCC 14019] Length = 333 Score = 107 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 +K+ LF G GG+ L E+ E ++E + T++ N P LI GD+ K+ Sbjct: 1 MKVLSLFSGCGGLDLGFEKA----GFEIPVANEFDKTIWDTFKINHPKTHLIEGDVRKVS 56 Query: 61 TQDIPDH-----DVLLAGFPCQPFSQAG 83 DI ++ D ++ G PCQ +S+AG Sbjct: 57 KNDISEYLSGNLDGIIGGPPCQSWSEAG 84 >gi|325860528|ref|ZP_08173633.1| modification methylase HaeIII [Prevotella denticola CRIS 18C-A] gi|325481968|gb|EGC84996.1| modification methylase HaeIII [Prevotella denticola CRIS 18C-A] Length = 403 Score = 107 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 13/95 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQAN---FPNTL 51 +KI LF G GG+ L F+ E F+++ + + Y +N N Sbjct: 5 IKIASLFSGCGGLDLGFIGGFDFMGKSYPKLPTEIVFANDFDTDAATCYNSNSLLTKNNH 64 Query: 52 ---IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + DI + ++IPD+D+LLAGFPCQPFS AG Sbjct: 65 AKCLLRDIRSVNVEEIPDYDILLAGFPCQPFSNAG 99 >gi|284050655|ref|ZP_06380865.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] gi|79835464|gb|ABB52092.1| Mod [Arthrospira platensis] Length = 406 Score = 107 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ LF G GG+ L + E ++ + N + +T++ N T+ +I +I Sbjct: 17 KLVSLFSGCGGMDLPFHRA----GFEVVWAIDCNGAACRTFRRNISETIACNNIQEIDIT 72 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +P D++ GFPCQ FS G Sbjct: 73 KVPKADLITGGFPCQDFSMIG 93 >gi|300124212|gb|ADJ68008.1| M.BanII [Aneurinibacillus aneurinilyticus] Length = 385 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI--KT 61 LF G GG+ + + V+ ++EI+ Y+ TYQAN P T GDI + + Sbjct: 8 ISLFSGAGGMDVGFKNA----GVKVLCANEIDKYASATYQANNPETKFKLGDIRDVYSEL 63 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ + D++ G PCQ FS AG Sbjct: 64 KEFKNIDIIFGGPPCQGFSVAG 85 >gi|109947738|ref|YP_664966.1| site-specific DNA methyltransferase [Helicobacter acinonychis str. Sheeba] gi|109714959|emb|CAJ99967.1| site-specific DNA methyltransferase [Helicobacter acinonychis str. Sheeba] Length = 327 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L EQ + ++E + TY+ N NT L+ DI ++ Sbjct: 1 MNLLSLFAGAGGLDLGFEQA----GFKIVIANEYDKNITPTYRLNHKNTQLLEKDIKNLQ 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 T +I D ++ G PCQ +S+AG Sbjct: 57 TNEINFSVDGIIGGPPCQSWSEAG 80 >gi|167837977|ref|ZP_02464836.1| modification methylase HaeII [Burkholderia thailandensis MSMB43] Length = 111 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF G+GG L L++ C +++E + Y+ NF GDI I Sbjct: 4 FRFVDLFAGLGGFHLALQR----LGGTCVYAAEWQEHLRDLYEVNFGLRP-EGDITLISP 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +D+P HDVL AGFPCQPFS+AG Sbjct: 59 KDVPSHDVLTAGFPCQPFSKAG 80 >gi|157265308|ref|YP_001467867.1| C5 cytosine-specific DNA methylase [Thermus phage P23-45] gi|157265426|ref|YP_001467984.1| C5 cytosine-specific DNA methylase [Thermus phage P74-26] gi|156905203|gb|ABU96847.1| C5 cytosine-specific DNA methylase [Thermus phage P23-45] gi|156905321|gb|ABU96964.1| C5 cytosine-specific DNA methylase [Thermus phage P74-26] Length = 368 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 7/88 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNH-------RNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 + LF G GG+ L F + + + N +V TY AN D Sbjct: 9 TVLSLFSGAGGMDLGFTGGFTFLGKTYPRTGFKVVKAYDNNRRAVDTYNANLDPVAELKD 68 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + ++ +IP DV++ GFPCQ FS AG Sbjct: 69 VTTLQDHEIPSVDVVIGGFPCQDFSLAG 96 >gi|1171045|sp|P09915|MTBR_BPRH1 RecName: Full=Modification methylase Rho11sI; Short=M.Rho11sI; AltName: Full=Bsu P11s; AltName: Full=Cytosine-specific methyltransferase Rho11sI gi|579194|emb|CAA28869.1| unnamed protein product [Bacillus phage rho11s] Length = 503 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANF--PNTLIFGDIA 57 L++ LF GIG E + E SEI+ Y++K+Y A L FGD++ Sbjct: 4 LRVMSLFSGIG----AFEAALRNIGVEYELVGFSEIDKYAIKSYCAIHNADEQLNFGDVS 59 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 KI + +P+ D+L+ G PCQ FS AG Sbjct: 60 KIDKKKLPEFDLLVGGSPCQSFSVAG 85 >gi|283797105|ref|ZP_06346258.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. M62/1] gi|291075522|gb|EFE12886.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. M62/1] Length = 535 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML + LF GIGG L H + ++SEI P+ ++ + FP+ GDI K+ Sbjct: 1 MLTLGSLFDGIGGFPL----AGIHNGITPLWASEIEPFPIQVTKLRFPDMEHVGDITKLD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +P DV+ G PCQ S AG Sbjct: 57 GGKLPPVDVICGGSPCQDLSVAG 79 >gi|317012898|gb|ADU83506.1| type II DNA modification enzyme [Helicobacter pylori Lithuania75] Length = 318 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81 >gi|314998281|ref|ZP_07863147.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133a01] gi|313587745|gb|EFR66590.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium TX0133a01] Length = 171 Score = 107 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 + DLF GIGG L +EQ + +C EI+ ++ ++Y+A + DI + Sbjct: 1 MTFLDLFAGIGGFCLGMEQAGH----QCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSV 56 Query: 60 KTQDIPD---HDVLLAGFPCQPFSQAG 83 + I D+L GFPCQ FS AG Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83 >gi|317177871|dbj|BAJ55660.1| Type II DNA modification enzyme [Helicobacter pylori F16] Length = 319 Score = 107 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81 >gi|218249004|ref|YP_002374375.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|218169482|gb|ACK68219.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] Length = 456 Score = 107 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDI 56 DLF GIGG R+ LEQ +C SEI+ ++K Y+ NF + GDI Sbjct: 28 FTFIDLFSGIGGFRIPLEQ----LGGKCLGYSEIDTEAIKVYRRNFIRYSNRDETYLGDI 83 Query: 57 AKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 ++ IP DV++ G PCQP+S AG Sbjct: 84 TQLN--QIPFKVDVIVGGVPCQPWSIAG 109 >gi|126660265|ref|ZP_01731380.1| putative DNA modification methylase (N.MgoV) [Cyanothece sp. CCY0110] gi|126618440|gb|EAZ89194.1| putative DNA modification methylase (N.MgoV) [Cyanothece sp. CCY0110] Length = 458 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDI 56 D F GIGG R+ LE+ +C SEI+ ++K YQ NF L GDI Sbjct: 28 FTFIDFFAGIGGFRIPLEK----LGGKCLGYSEIDKEAIKVYQQNFISYYNSEELNLGDI 83 Query: 57 AKIKTQDIPD-HDVLLAGFPCQPFSQAG 83 +KI + +P D+ + G PCQP+S AG Sbjct: 84 SKINS--LPKNVDLFVGGVPCQPWSVAG 109 >gi|323693327|ref|ZP_08107545.1| hypothetical protein HMPREF9475_02408 [Clostridium symbiosum WAL-14673] gi|323502810|gb|EGB18654.1| hypothetical protein HMPREF9475_02408 [Clostridium symbiosum WAL-14673] Length = 536 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M DLF G GG+ L QT + + + E NP +TY+ N P +FGD+ Sbjct: 1 MFNTIDLFAGAGGLSLGFMQT---KKFDIKVAYEFNPAMQETYKKNHPGVAVFGDVRDAN 57 Query: 61 TQDIPD----HDVLLAGFPCQPFSQA 82 +I + DV++ G PCQ FS A Sbjct: 58 YAEIKEKYGNIDVVIGGPPCQGFSNA 83 >gi|315446158|ref|YP_004079037.1| DNA-methyltransferase Dcm [Mycobacterium sp. Spyr1] gi|315264461|gb|ADU01203.1| DNA-methyltransferase Dcm [Mycobacterium sp. Spyr1] Length = 365 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 LK+ DLF G GG+ + + FS E+N ++ TY ANF + + +GDI + Sbjct: 5 LKLIDLFAGCGGMTAGF----KPQGFDPVFSVELNLHAAATYAANFGEDHIFWGDIDEAL 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++P+ DV++ G PCQ FS G Sbjct: 61 KGEVPEADVVIGGPPCQGFSNLG 83 >gi|295103751|emb|CBL01295.1| DNA-methyltransferase (dcm) [Faecalibacterium prausnitzii SL3/3] Length = 412 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPN--TLIFG 54 +++ +LF G+GG RL LEQ + + ++++ P ++ + Y+ +F + + Sbjct: 4 IRVVELFAGVGGFRLGLEQASSC--FQTVWANQWEPSMRSQFAFECYERHFGHRPEHVCQ 61 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI K IP HD+L+ GFPCQ +S A Sbjct: 62 DIVTAKGN-IPPHDLLVGGFPCQDYSIA 88 >gi|288801979|ref|ZP_06407420.1| modification methylase HaeIII (Cytosine-specific methyltransferase HaeIII) [Prevotella melaninogenica D18] gi|288335414|gb|EFC73848.1| modification methylase HaeIII (Cytosine-specific methyltransferase HaeIII) [Prevotella melaninogenica D18] Length = 336 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +++ LF G GG+ ++E + T++ANFP+T LI GDI I Sbjct: 1 MRLISLFSGAGGLDKGFHNA----GFRTIVANEFDKKICPTFRANFPDTKLIEGDIHDIP 56 Query: 61 TQDIPDHDV-LLAGFPCQPFSQAG 83 + P + V ++ G PCQ +S+AG Sbjct: 57 SDAFPMNPVGIIGGPPCQSWSEAG 80 >gi|257062089|ref|YP_003139977.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|256592255|gb|ACV03142.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 456 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDI 56 DLF GIGG R+ LEQ +C SEI+ ++K Y+ NF + GDI Sbjct: 28 FTFIDLFSGIGGFRIPLEQ----LGGKCLGYSEIDTEAIKVYRRNFIRYSNRDETYLGDI 83 Query: 57 AKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 ++ IP DV++ G PCQP+S AG Sbjct: 84 TQLN--QIPFKVDVIVGGVPCQPWSIAG 109 >gi|261364680|ref|ZP_05977563.1| modification methylase Eco47II [Neisseria mucosa ATCC 25996] gi|288566964|gb|EFC88524.1| modification methylase Eco47II [Neisseria mucosa ATCC 25996] Length = 419 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 6/85 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 + K+ +LF G GG+ + +EQ E +EI+ + KT + N PN ++ GDIAK+ Sbjct: 75 LYKLLELFAGAGGLAIGMEQA----GFESVLLNEIDAAACKTLRKNRPNWNVVEGDIAKL 130 Query: 60 KTQDIPD-HDVLLAGFPCQPFSQAG 83 D D+L GFPCQ FS AG Sbjct: 131 DFTPYRDQIDILSGGFPCQAFSYAG 155 >gi|317182374|dbj|BAJ60158.1| Type II DNA modification enzyme [Helicobacter pylori F57] Length = 318 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ ++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQCR----LKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81 >gi|2599488|gb|AAB84141.1| FauI DNA methyltransferase [Flavobacterium aquatile] Length = 343 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 7/87 (8%) Query: 2 LKITDLFCGIGGIRLD-------LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 LK+ LFCG GG+ + L++ ++ + ++ + + Y+ K Y NF + Sbjct: 10 LKVASLFCGCGGMDVGIQGDFKFLKKHYDTLPFKVVYAVDNDAYATKIYNDNFAHKCETK 69 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81 D+ I ++PDHD+LL GFPCQ FS Sbjct: 70 DVRDIVPSEVPDHDILLGGFPCQSFSI 96 >gi|80159730|ref|YP_398474.1| putative DNA methylase [Clostridium phage c-st] gi|78675320|dbj|BAE47742.1| putative DNA methylase [Clostridium phage c-st] Length = 370 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 +K D F G G R +E + EC EI + +TY+ N+ T F D+A++ Sbjct: 1 MKFIDFFSGAGMFRKGMEDAGH----ECIGYVEIQKQARETYETNYDTTKEWTFHDVAQL 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 K +DIP+ D+ GFPC+ S A Sbjct: 57 KAEDIPNADIWCFGFPCKNMSTA 79 >gi|254285523|ref|ZP_04960487.1| modification methylase Eco47II [Vibrio cholerae AM-19226] gi|150424385|gb|EDN16322.1| modification methylase Eco47II [Vibrio cholerae AM-19226] Length = 417 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 K+ +LF G GG+ + +EQ ++ +E++ ++ T + N P+ +I GDIAK+ Sbjct: 78 YKLVELFAGGGGLAIGMEQA----GLKSILLNEMDKHACNTLRHNRPDWNVIEGDIAKVD 133 Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83 I + DVL GFPCQ FS AG Sbjct: 134 FTQIKEEVDVLTGGFPCQAFSYAG 157 >gi|261838450|gb|ACX98216.1| type II m5C methylase [Helicobacter pylori 51] Length = 318 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81 >gi|322510825|gb|ADX06139.1| putative C-5 cytosine-specific DNA methyltransferase [Organic Lake phycodnavirus 1] Length = 390 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 K DLFCG+G + +N C +S+IN K Y+ N+ GDI KI Sbjct: 80 KYIDLFCGLGAFHTAFNRNNILQNEVKYTCVLASDINECVRKIYEENYG-IKPEGDINKI 138 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +PD D+L AGFPCQPFS AG Sbjct: 139 NIDTMPDFDILCAGFPCQPFSIAG 162 >gi|317180612|dbj|BAJ58398.1| Type II modification enzyme [Helicobacter pylori F32] Length = 327 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L E+ + ++E + TY+ N NT L+ DI ++ Sbjct: 1 MNLLSLFAGAGGLDLGFEKA----GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQ 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 T +I D ++ G PCQ +S+AG Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80 >gi|317504402|ref|ZP_07962385.1| modification methylase Sau3AI [Prevotella salivae DSM 15606] gi|315664482|gb|EFV04166.1| modification methylase Sau3AI [Prevotella salivae DSM 15606] Length = 579 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 8/87 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-D 55 +K+ +LF G+GG R+ LE + E ++++ P + Y+A F + D Sbjct: 9 IKVVELFAGVGGFRIGLEGASDD--YETIWNNQWEPSTIHQDASLVYRARFGSKGHCNED 66 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 I + T +IP+HD+L+ GFPCQ +S A Sbjct: 67 INNVDTANIPNHDLLVGGFPCQDYSVA 93 >gi|313201769|ref|YP_004040427.1| modification methylase [Methylovorus sp. MP688] gi|312441085|gb|ADQ85191.1| putative modification methylase [Methylovorus sp. MP688] Length = 378 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +K +LF GIGG RL +++N+ F+++I + Y + F +++ GDI Sbjct: 1 MKAVELFSGIGGFRL----ACDNKNIRTVFANDIKTLACDVYASQFGTSVLHRGDIKDF- 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IPDHD+L AGFPCQPFS AG Sbjct: 56 FDKIPDHDLLTAGFPCQPFSSAG 78 >gi|148988377|ref|ZP_01819824.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae SP6-BS73] gi|147926058|gb|EDK77132.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae SP6-BS73] Length = 343 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 7/87 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 LKI LF G GG + F+ +E ++++I + K ++ NF T Sbjct: 4 LKIASLFSGGGGTDIGFAGGFDFLGKHYADNQIEIVYANDIEDSANKMFEKNFGVTPDNR 63 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81 +I +IK+ +IP D+L GFPCQ FS Sbjct: 64 NIREIKSDEIPSFDILTGGFPCQSFSV 90 >gi|289167787|ref|YP_003446056.1| site-specific DNA methylase [Streptococcus mitis B6] gi|288907354|emb|CBJ22191.1| site-specific DNA methylase [Streptococcus mitis B6] Length = 346 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 7/87 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 LKI LF G GG + F+ +E ++++I + K ++ NF T Sbjct: 4 LKIASLFSGGGGTDIGFAGGFDFLGKHYADNQIEIVYANDIEDSANKMFEKNFGVTPDNR 63 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81 +I +IK+ +IP D+L GFPCQ FS Sbjct: 64 NIREIKSDEIPSFDILTGGFPCQSFSV 90 >gi|308184861|ref|YP_003928994.1| type II DNA modification enzyme [Helicobacter pylori SJM180] gi|308060781|gb|ADO02677.1| type II DNA modification enzyme [Helicobacter pylori SJM180] Length = 318 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LE+ +++C +EIN ++KTY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLERC----HLKCVGHAEINHEALKTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALVSGFPCQAFSING 81 >gi|254228592|ref|ZP_04922017.1| Site-specific DNA methylase [Vibrio sp. Ex25] gi|262392607|ref|YP_003284461.1| DNA-cytosine methyltransferase [Vibrio sp. Ex25] gi|151938974|gb|EDN57807.1| Site-specific DNA methylase [Vibrio sp. Ex25] gi|262336201|gb|ACY49996.1| DNA-cytosine methyltransferase [Vibrio sp. Ex25] Length = 427 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L F GIGG L E ++ E F E+N + + ++ + GDI+ + Sbjct: 8 LNFNSFFAGIGGFDLAFE----NQGFEPSFQCELNAFCQSVLKKHWGRVPLHGDISNLDA 63 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 +IP V GFPCQ S A Sbjct: 64 SEIPKATVWCGGFPCQDLSVA 84 >gi|308062397|gb|ADO04285.1| type II DNA modification enzyme [Helicobacter pylori Cuz20] Length = 318 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ ++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQCR----LKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81 >gi|146298415|ref|YP_001193006.1| DNA-cytosine methyltransferase [Flavobacterium johnsoniae UW101] gi|146152833|gb|ABQ03687.1| DNA-cytosine methyltransferase [Flavobacterium johnsoniae UW101] Length = 329 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + L+ G+GGI L ++ E +++E + + TY+ NF + LI GD+ + Sbjct: 4 TVGSLYAGVGGICLGFKKA----GFELEWANEFDKNACITYKNNFEHNLIEGDVMALDVT 59 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + ++L AGFPCQPFS AG Sbjct: 60 SLKKINILTAGFPCQPFSVAG 80 >gi|188527304|ref|YP_001909991.1| site-specific DNA methyltransferase [Helicobacter pylori Shi470] gi|188143544|gb|ACD47961.1| site-specific DNA methyltransferase [Helicobacter pylori Shi470] Length = 327 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L E+ + ++E + TY+ N NT L+ DI ++ Sbjct: 1 MNLLSLFAGAGGLDLGFEKA----GFKIVVANEYDKNITPTYRLNHKNTRLLEKDIKNLQ 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 T +I D ++ G PCQ +S+AG Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80 >gi|291525029|emb|CBK90616.1| DNA-methyltransferase (dcm) [Eubacterium rectale DSM 17629] Length = 337 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ D FCG GG+ + + E + + + Y+V++Y+AN + + DI ++ Sbjct: 5 LKVNDFFCGCGGMGIAFKNA----GYEIAGAWDFDKYAVESYRANVGDHVQKADIKELHQ 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIP DV GFPCQ S AG Sbjct: 61 ADIPQADVWAFGFPCQDLSVAG 82 >gi|217033005|ref|ZP_03438476.1| hypothetical protein HPB128_151g1 [Helicobacter pylori B128] gi|298736554|ref|YP_003729080.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] gi|216945262|gb|EEC23940.1| hypothetical protein HPB128_151g1 [Helicobacter pylori B128] gi|298355744|emb|CBI66616.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] Length = 327 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L E+ + ++E + TY+ N NT L+ DI ++ Sbjct: 1 MNLLSLFAGAGGLDLGFEKA----GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQ 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 T +I D ++ G PCQ +S+AG Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80 >gi|217034513|ref|ZP_03439924.1| hypothetical protein HP9810_873g29 [Helicobacter pylori 98-10] gi|216943054|gb|EEC22533.1| hypothetical protein HP9810_873g29 [Helicobacter pylori 98-10] Length = 327 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L E+ + ++E + TY+ N NT L+ DI ++ Sbjct: 1 MNLLSLFAGAGGLDLGFEKA----GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQ 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 T +I D ++ G PCQ +S+AG Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80 >gi|315586485|gb|ADU40866.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A] gi|317178791|dbj|BAJ56579.1| Type II modification enzyme [Helicobacter pylori F30] Length = 327 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L E+ + ++E + TY+ N NT L+ DI ++ Sbjct: 1 MNLLSLFAGAGGLDLGFEKA----GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQ 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 T +I D ++ G PCQ +S+AG Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80 >gi|317178577|dbj|BAJ56365.1| Type II DNA modification enzyme [Helicobacter pylori F30] Length = 318 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ ++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQCR----LKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81 >gi|308063355|gb|ADO05242.1| site-specific DNA methyltransferase [Helicobacter pylori Sat464] Length = 327 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L E+ + ++E + TY+ N NT L+ DI ++ Sbjct: 1 MNLLSLFAGAGGLDLGFEKA----GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQ 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 T +I D ++ G PCQ +S+AG Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80 >gi|229824483|ref|ZP_04450552.1| hypothetical protein GCWU000282_01806 [Catonella morbi ATCC 51271] gi|229786084|gb|EEP22198.1| hypothetical protein GCWU000282_01806 [Catonella morbi ATCC 51271] Length = 406 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 I F G+GGI L EQT +++E + + TY N+P+T + DI ++ Sbjct: 12 YNIAAFFSGVGGIELGFEQTGK---FHTVYANEFDANARTTYALNYPDTFLDPRDIHEVS 68 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 +I + D+++ GFPCQ FS AG Sbjct: 69 PDEIGEQVDLVVGGFPCQAFSIAG 92 >gi|319778406|ref|YP_004129319.1| DNA (cytosine-5-)-methyltransferase [Taylorella equigenitalis MCE9] gi|317108430|gb|ADU91176.1| DNA (cytosine-5-)-methyltransferase [Taylorella equigenitalis MCE9] Length = 160 Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 41/77 (53%), Positives = 50/77 (64%), Gaps = 2/77 (2%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDIPD 66 F GIG IRL EQ F ++ ++ + SEI+ +VKTY +NF N LI GD+ K DIP Sbjct: 2 FAGIGCIRLGFEQAFGNK-LKTVYVSEIDSNAVKTYTSNFSSNKLIHGDVTKEVESDIPP 60 Query: 67 HDVLLAGFPCQPFSQAG 83 HD LLAGFPC FS AG Sbjct: 61 HDFLLAGFPCHAFSAAG 77 >gi|239625877|ref|ZP_04668908.1| methyltransferase [Clostridiales bacterium 1_7_47_FAA] gi|239520107|gb|EEQ59973.1| methyltransferase [Clostridiales bacterium 1_7_47FAA] Length = 338 Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ D FCG GG+ + + E + + + Y+V++Y+AN + + DI ++ Sbjct: 5 LKVNDFFCGCGGMGIAFKNA----GYEIAGAWDFDKYAVESYRANVGDHVQKADIKELHQ 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIP DV GFPCQ S AG Sbjct: 61 ADIPQADVWAFGFPCQDLSVAG 82 >gi|208435018|ref|YP_002266684.1| type II DNA modification enzyme [Helicobacter pylori G27] gi|208432947|gb|ACI27818.1| type II DNA modification enzyme [Helicobacter pylori G27] Length = 318 Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALVSGFPCQAFSING 81 >gi|313675860|ref|YP_004053856.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] gi|312942558|gb|ADR21748.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] Length = 412 Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 6/82 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + +LF G GG+ + LE+ ++C +EI+ ++ +T + N P+ ++ GDI + Sbjct: 76 VLELFAGAGGLAVGLEKA----GLKCQALNEIDKWACQTLRNNRPHWNVLEGDIKDFDFK 131 Query: 63 DIPD-HDVLLAGFPCQPFSQAG 83 ++ + DV+ GFPCQ FS AG Sbjct: 132 ELENQIDVVTGGFPCQAFSYAG 153 >gi|255022454|ref|ZP_05294440.1| hypothetical protein LmonocyFSL_01025 [Listeria monocytogenes FSL J1-208] Length = 150 Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 9/86 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKIK 60 DLF G+GG RL +E + +C EI+ Y+ +Y A F DI I Sbjct: 12 TFVDLFAGVGGFRLGMEAAGH----KCVGYVEIDKYARTSYTAIHQTEGEFEGHDITSIS 67 Query: 61 TQ---DIPDHDVLLAGFPCQPFSQAG 83 I D++ GFPCQ FS AG Sbjct: 68 DDVIRSIGRVDIITGGFPCQAFSIAG 93 >gi|325678044|ref|ZP_08157681.1| putative DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8] gi|324110261|gb|EGC04440.1| putative DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8] Length = 324 Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 8/88 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFP-NTLI 52 M + LFCG GG + F + FS +I+ ++ TY+ANF + +I Sbjct: 1 MYNVVSLFCGCGGADMGTVGGFVFNKKKYKKHPCKLVFSCDIDQKAIDTYKANFNSDEVI 60 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFS 80 GD+ + ++++P D+L GFPCQ FS Sbjct: 61 CGDVCDLPSENVPPCDILTGGFPCQSFS 88 >gi|57116673|gb|AAW33810.1| M.HinP1I methyltransferase [Haemophilus influenzae] Length = 322 Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D GIGG RL LE +EC SE++ KTY+ F ++ GD+ ++ Sbjct: 4 LKFIDFCAGIGGGRLGLE----LNGMECIAHSEVDLNPAKTYEIFFNDSRNLGDLTQLAP 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + +PD D+++AGFPCQ FS G Sbjct: 60 KSLPDFDLMIAGFPCQTFSIIG 81 >gi|216171|gb|AAA32604.1| DNA methyltransferase [Bacillus phage SPR] Length = 439 Score = 106 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 L++ LF GIG L E SEI+ Y+VK++ N L FGD++KI Sbjct: 4 LRVMSLFSGIGAFEAALRNIG--VGYELVGFSEIDKYAVKSFCAIHNVDEQLNFGDVSKI 61 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +P+ D+L+ G PCQ FS AG Sbjct: 62 DKKKLPEFDLLVGGSPCQSFSVAG 85 >gi|127431|sp|P00476|MTBS_BPSPR RecName: Full=Modification methylase SPRI; Short=M.SPRI; AltName: Full=Cytosine-specific methyltransferase SPRI gi|224091|prf||1010250A methyltransferase Length = 439 Score = 106 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 L++ LF GIG L E SEI+ Y+VK++ N L FGD++KI Sbjct: 4 LRVMSLFSGIGAFEAALRNIG--VGYELVGFSEIDKYAVKSFCAIHNVDEQLNFGDVSKI 61 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +P+ D+L+ G PCQ FS AG Sbjct: 62 DKKKLPEFDLLVGGSPCQSFSVAG 85 >gi|16077674|ref|NP_388488.1| DNA-methyltransferase [Bacillus subtilis subsp. subtilis str. 168] gi|221308443|ref|ZP_03590290.1| hypothetical protein Bsubs1_03408 [Bacillus subtilis subsp. subtilis str. 168] gi|221312765|ref|ZP_03594570.1| hypothetical protein BsubsN3_03384 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317688|ref|ZP_03598982.1| hypothetical protein BsubsJ_03343 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321964|ref|ZP_03603258.1| hypothetical protein BsubsS_03414 [Bacillus subtilis subsp. subtilis str. SMY] gi|81669152|sp|O34680|YDIP_BACSU RecName: Full=Probable BsuMI modification methylase subunit ydiP; Short=M2.BsuMI; AltName: Full=Cytosine-specific methyltransferase M2.BsuMI gi|2521998|dbj|BAA22751.1| ydiP [Bacillus subtilis] gi|2632920|emb|CAB12426.1| DNA-methyltransferase (cytosine-specific) [Bacillus subtilis subsp. subtilis str. 168] Length = 389 Score = 106 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 6/82 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIGGI L L Q+ + + E++P + NFP I DI +I+ Sbjct: 1 MKVVSLFSGIGGIELGLHQSGHTTEI----FCEVDPLAKAVLSKNFPGVKIEDDINEIR- 55 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++P D++ AGFPCQ SQAG Sbjct: 56 -ELPSCDLVAAGFPCQDLSQAG 76 >gi|306828113|ref|ZP_07461376.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pyogenes ATCC 10782] gi|304429650|gb|EFM32696.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pyogenes ATCC 10782] Length = 214 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 2/83 (2%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 MLK+ + F GIG R+ L E +EI+ +++K+Y+A GDI+KI Sbjct: 3 MLKVFEAFAGIGTQRMALRNIGIPH--EVVAIAEIDKFAIKSYEAIHGPVNNLGDISKIN 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 DIPDHD+ FPCQ S AG Sbjct: 61 PDDIPDHDLFTYSFPCQDISVAG 83 >gi|188527903|ref|YP_001910590.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Shi470] gi|188144143|gb|ACD48560.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Shi470] gi|308063905|gb|ADO05792.1| type II DNA modification enzyme [Helicobacter pylori Sat464] Length = 320 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ ++C +EIN +++TY+ F +T FGD+ +IK Sbjct: 5 ILTFMDFCSGIGGGRLGLEQCR----LKCVGHAEINHEALRTYELFFKDTHNFGDLMRIK 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 61 PNDLPDFDALISGFPCQAFSING 83 >gi|315587009|gb|ADU41390.1| C-5 cytosine-specific DNA methylase [Helicobacter pylori 35A] Length = 313 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 4/78 (5%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+P Sbjct: 2 DFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLP 57 Query: 66 DHDVLLAGFPCQPFSQAG 83 D DVL++GFPCQ FS G Sbjct: 58 DFDVLISGFPCQAFSING 75 >gi|332673919|gb|AEE70736.1| C-5 cytosine-specific DNA methylase [Helicobacter pylori 83] Length = 319 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTYNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81 >gi|329960681|ref|ZP_08299024.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fluxus YIT 12057] gi|328532554|gb|EGF59348.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fluxus YIT 12057] Length = 572 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 8/87 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNT-LIFGD 55 +++ +LF G+GG R+ LE + + ++++ P + Y+A F + D Sbjct: 5 IRVVELFAGVGGFRIGLEGASDA--YQTIWNNQWEPSTKRQDASLVYKARFGSKGHSNRD 62 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 I + T++IPDHD+L+ GFPCQ +S A Sbjct: 63 INTVPTKEIPDHDLLVGGFPCQDYSVA 89 >gi|325298662|ref|YP_004258579.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] gi|324318215|gb|ADY36106.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170] Length = 336 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + + LF G GG+ L ++ + ++E++ TY+ NFP+ LI GDI I Sbjct: 1 MTLISLFSGAGGLDLGF----HYAGFKTIIANELDAKICPTYRINFPDVKLIEGDIRNIP 56 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 + + PD ++ G PCQ +S+AG Sbjct: 57 SSEFPDGITGIIGGPPCQSWSEAG 80 >gi|227536485|ref|ZP_03966534.1| site-specific DNA-methyltransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227243562|gb|EEI93577.1| site-specific DNA-methyltransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 349 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML+ LF GIGG + + + FS E +P+ + +PNT + DI + Sbjct: 1 MLRHGSLFSGIGGFDI----AASWMGWQNVFSCEKDPFCRTVLKHYWPNTAHYEDIYDFR 56 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 H D++ GFPCQPFSQAG Sbjct: 57 ATHFRGHIDIISGGFPCQPFSQAG 80 >gi|228962260|ref|ZP_04123693.1| Phage-related DNA methylase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228797429|gb|EEM44609.1| Phage-related DNA methylase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 180 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 L DLF GIG R+ +E+ + +C E N + +Y+A DI + Sbjct: 3 LTFIDLFAGIGMFRIGMEKAGH----KCIGWVEWNKPARTSYEAMHDTKGEWTENDIRNV 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 IP DV AGFPCQ S+ G Sbjct: 59 TGTGIPAADVWCAGFPCQDISKNG 82 >gi|260591129|ref|ZP_05856587.1| modification methylase AluI [Prevotella veroralis F0319] gi|260536994|gb|EEX19611.1| modification methylase AluI [Prevotella veroralis F0319] Length = 452 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF G+GG L L++ +C F+SE+ Y+ NF N G+I + Sbjct: 10 YTFIDLFAGLGGFHLALQK----LGCKCVFASELQTDLQTLYERNF-NMKCSGNINDVNI 64 Query: 62 Q-DIPDHDVLLAGFPCQPFSQAG 83 + DIP HD+L GFPCQPFSQAG Sbjct: 65 KTDIPHHDILCGGFPCQPFSQAG 87 >gi|238765010|ref|ZP_04625947.1| DNA-cytosine methyltransferase [Yersinia kristensenii ATCC 33638] gi|238696779|gb|EEP89559.1| DNA-cytosine methyltransferase [Yersinia kristensenii ATCC 33638] Length = 338 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK-IK 60 K+ DLFCG GG+ + E + + + ++KTY ANF N + +I + I+ Sbjct: 7 FKVIDLFCGAGGLSAGFLKGKQANYFESILAIDNDTAAIKTYNANFGNHGVTANIDEWIE 66 Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81 +IP D+++ G PCQ FS Sbjct: 67 ENEIPQADLVIGGPPCQGFSL 87 >gi|262038316|ref|ZP_06011702.1| modification methylase spri [Leptotrichia goodfellowii F0264] gi|261747667|gb|EEY35120.1| modification methylase spri [Leptotrichia goodfellowii F0264] Length = 318 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 D GIGG RL E+ C EI+ + KTYQ + + +GD+ K+ + Sbjct: 4 TFFDFCSGIGGGRLGFEK----NGFICVGHCEIDEKADKTYQLFYNDGRNYGDLMKVNPK 59 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 ++PD + L+AGFPCQ FS G Sbjct: 60 ELPDFNYLIAGFPCQTFSIVG 80 >gi|294678239|ref|YP_003578854.1| cytosine-specific DNA-methyltransferase [Rhodobacter capsulatus SB 1003] gi|294477059|gb|ADE86447.1| site-specific DNA-methyltransferase (cytosine-specific) [Rhodobacter capsulatus SB 1003] Length = 451 Score = 105 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 6/82 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK DLF G+GG LE C F+SE+N Y+ NF GDI + Sbjct: 4 LKFADLFAGLGGFHQALE----GLGHTCVFASELNSGLADLYEKNFG-IRPHGDIRE-AI 57 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+P HD+L AGFPCQPFS+AG Sbjct: 58 DDVPPHDILCAGFPCQPFSKAG 79 >gi|90408525|ref|ZP_01216682.1| DNA-methyltransferase (cytosine-specific) [Psychromonas sp. CNPT3] gi|90310344|gb|EAS38472.1| DNA-methyltransferase (cytosine-specific) [Psychromonas sp. CNPT3] Length = 380 Score = 105 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 20/102 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 K+ LF G+GG+ L + FN + + +++E++ ++KTY+ NF + +I GDI KI Sbjct: 3 YKVGSLFAGVGGVCLGFKSAFNEKGGYQLIWANELDEQAIKTYRCNFEHNMIPGDIEKIV 62 Query: 61 TQDIPDH-------------------DVLLAGFPCQPFSQAG 83 + DVL AGFPCQ FS AG Sbjct: 63 KPERAKADGEEALFAQKKMQMLAQPIDVLTAGFPCQAFSIAG 104 >gi|328553026|gb|AEB23518.1| SP-beta prophage DNA (cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens TA208] Length = 503 Score = 105 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQ--ANFPNTLIFGDIA 57 L++ LF GIG E + E SEI+ Y++K+Y N FGD++ Sbjct: 4 LRVMSLFSGIG----AFEAALRNIGVEYELVGFSEIDKYAIKSYCAIHNVDEQSNFGDVS 59 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 KI + +P+ D+L+ G PCQ FS AG Sbjct: 60 KIDKKKLPEFDLLVGGSPCQSFSVAG 85 >gi|228919775|ref|ZP_04083134.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839862|gb|EEM85144.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 442 Score = 105 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG- 54 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 16 MVKVVELFAGVGGFRLGLEA---NENFEIIWGNQWEPLTKAQHAFNCYATQFENKGIHEN 72 Query: 55 -DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA++ +IP+HD+L+ GFPCQ +S A Sbjct: 73 KDIAEVWP-EIPEHDLLVGGFPCQDYSVA 100 >gi|229195244|ref|ZP_04322018.1| Modification methylase Sau3AI [Bacillus cereus m1293] gi|228588270|gb|EEK46314.1| Modification methylase Sau3AI [Bacillus cereus m1293] Length = 442 Score = 105 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG- 54 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 16 MVKVVELFAGVGGFRLGLEA---NENFEIIWGNQWEPLTKAQHAFNCYATQFENKGIHEN 72 Query: 55 -DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA++ +IP+HD+L+ GFPCQ +S A Sbjct: 73 KDIAEVWP-EIPEHDLLVGGFPCQDYSVA 100 >gi|262402827|ref|ZP_06079388.1| type II restriction-modification system methylation subunit [Vibrio sp. RC586] gi|262351609|gb|EEZ00742.1| type II restriction-modification system methylation subunit [Vibrio sp. RC586] Length = 341 Score = 105 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 7/83 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + LF G GG+ L + FS++I TY+ N + LI DI KI Sbjct: 11 RTISLFSGCGGLDLGFHKA----GFNIVFSNDIEKNVESTYRYNLGDILIK-DITKIDID 65 Query: 63 -DIP-DHDVLLAGFPCQPFSQAG 83 +IP D DV+LAG PCQPFS AG Sbjct: 66 SEIPNDIDVILAGIPCQPFSSAG 88 >gi|163755904|ref|ZP_02163021.1| modification methylase (Eco47II, Sau96I) [Kordia algicida OT-1] gi|161324075|gb|EDP95407.1| modification methylase (Eco47II, Sau96I) [Kordia algicida OT-1] Length = 413 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++ +LF G GG+ + LE+ ++C +EI+ ++ +T + N P+ ++ G+I Sbjct: 75 YRVLELFAGAGGLAIGLEKA----GIKCVALNEIDKWACQTLRENRPDWNVLEGNIKSFD 130 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 D +++ GFPCQ FS AG Sbjct: 131 FSKYKDKVEIVTGGFPCQAFSYAG 154 >gi|167753338|ref|ZP_02425465.1| hypothetical protein ALIPUT_01612 [Alistipes putredinis DSM 17216] gi|167659269|gb|EDS03399.1| hypothetical protein ALIPUT_01612 [Alistipes putredinis DSM 17216] Length = 319 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + LF GIGG L E C EI+P+ K + +FPN + DI Sbjct: 1 MTHASLFSGIGGFDLAAEWAGWTNAFNC----EIDPFCRKVLKYHFPNAEQYEDIRATDF 56 Query: 62 QDIPD-HDVLLAGFPCQPFSQAG 83 D DVL GFPCQPFS AG Sbjct: 57 TVWKDRIDVLTGGFPCQPFSLAG 79 >gi|261326799|emb|CBH09772.1| cytosine-specific DNA methylase, putative [Trypanosoma brucei gambiense DAL972] Length = 621 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 21/99 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--------PNT--- 50 ++LF GIG R+ LE+ +C F+ E P++ Y AN N Sbjct: 226 FTFSELFAGIGMFRVGLER----IGGKCVFAVECAPHARSVYHANHHLPRRSSCGNEALP 281 Query: 51 ------LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + GDI + + P HDVL AGFPCQ F++AG Sbjct: 282 ATRRPVPLVGDITTVPSHYFPHHDVLTAGFPCQSFAKAG 320 >gi|328912201|gb|AEB63797.1| Modification methylase Rho11sI [Bacillus amyloliquefaciens LL3] Length = 503 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQ--ANFPNTLIFGDIA 57 L++ LF GIG E + E SEI+ Y++K+Y N L +GD++ Sbjct: 4 LRVMSLFSGIG----AFEAALRNIGVEYELVGFSEIDKYAIKSYCAIHNVDEQLNYGDVS 59 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 KI +P+ D+L+ G PCQ FS AG Sbjct: 60 KIDKTFLPEFDLLVGGSPCQSFSVAG 85 >gi|292670760|ref|ZP_06604186.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] gi|292647381|gb|EFF65353.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] Length = 476 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF GIGG L H V ++SEI P+ +FPN FGDI +I Sbjct: 1 MTLGSLFDGIGGWLL----AARHAGVTPVWASEIEPFPCSVTARHFPNVKQFGDITQIDP 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +I D++ AG PCQ S AG Sbjct: 57 DEIDPVDIICAGSPCQDLSIAG 78 >gi|239624728|ref|ZP_04667759.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium 1_7_47_FAA] gi|239521114|gb|EEQ60980.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium 1_7_47FAA] Length = 554 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + + DLF G GG+ L +QT V+ ++E N + KTY+ NF ++ D+ I Sbjct: 22 IYNVIDLFAGAGGLSLGFKQTGQ---VKIIAAAENNLNARKTYKRNFKLARLYSDVRTID 78 Query: 61 TQDIPD----HDVLLAGFPCQPFSQA 82 ++ D D+++ G PCQ FS A Sbjct: 79 YAELQDTVGPVDIVIGGPPCQGFSNA 104 >gi|229148238|ref|ZP_04276541.1| Phage-related DNA methylase [Bacillus cereus BDRD-ST24] gi|228635250|gb|EEK91777.1| Phage-related DNA methylase [Bacillus cereus BDRD-ST24] Length = 180 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 L DLF G+G +R+ LEQ + C E N + KTY+A DI Sbjct: 3 LTFIDLFAGVGMMRIGLEQAGH----TCIGFCEWNEPARKTYEAMHDTEGEWTEHDIRNA 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K IP D+ AGFPC S+ G Sbjct: 59 KGTTIPRADIWTAGFPCTDISKNG 82 >gi|238788388|ref|ZP_04632182.1| DNA-cytosine methyltransferase [Yersinia frederiksenii ATCC 33641] gi|238723634|gb|EEQ15280.1| DNA-cytosine methyltransferase [Yersinia frederiksenii ATCC 33641] Length = 380 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK-IK 60 K+ DLFCG GG+ + E + + + +++TY ANF N + +I + I Sbjct: 11 FKVIDLFCGAGGLSAGFLKGKQANYFESILAIDNDTAAIRTYNANFGNHGVTANIDEWIA 70 Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81 +IP D+++ G PCQ FS Sbjct: 71 ENEIPQADIVIGGPPCQGFSL 91 >gi|109947180|ref|YP_664408.1| C-5 cytosine-specific DNA methylase [Helicobacter acinonychis str. Sheeba] gi|109714401|emb|CAJ99409.1| C-5 cytosine-specific DNA methylase [Helicobacter acinonychis str. Sheeba] Length = 315 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 4/78 (5%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 D GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I D+P Sbjct: 2 DFCSGIGGGRLGLERC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLP 57 Query: 66 DHDVLLAGFPCQPFSQAG 83 D DVL++GFPCQ FS G Sbjct: 58 DFDVLISGFPCQAFSING 75 >gi|126700764|ref|YP_001089661.1| putative DNA-methyltransferase [Clostridium difficile 630] gi|115252201|emb|CAJ70040.1| putative DNA-methyltransferase [Clostridium difficile] Length = 541 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M + DLF G GG+ L E T + E N + KTY N P+ + DI ++ Sbjct: 1 MYNVIDLFAGAGGLSLGFEMT---KKFNMVAFVEKNDNAAKTYLENHPSVKRYCDIKRLD 57 Query: 61 TQDI----PDHDVLLAGFPCQPFSQA 82 QDI DV++ G PCQ FS A Sbjct: 58 FQDILNSVDKIDVVIGGPPCQGFSNA 83 >gi|251811836|ref|ZP_04826309.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis BCM-HMP0060] gi|282875124|ref|ZP_06283997.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis SK135] gi|251804633|gb|EES57290.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis BCM-HMP0060] gi|281295889|gb|EFA88410.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis SK135] Length = 329 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 DLF G GG+ L + + FS E + + +TY+ NFPN ++ DI +I Sbjct: 3 YNYIDLFSGAGGMSLGF----DLEGFKNVFSVEYDLQTAQTYRYNFPNHVLINKDIQEIS 58 Query: 61 TQDIPD------HDVLLAGFPCQPFSQAG 83 T +I DV++ G PCQ FS AG Sbjct: 59 TNEIKKIINNNTVDVIIGGPPCQGFSLAG 87 >gi|262381005|ref|ZP_06074143.1| site-specific DNA-methyltransferase [Bacteroides sp. 2_1_33B] gi|262296182|gb|EEY84112.1| site-specific DNA-methyltransferase [Bacteroides sp. 2_1_33B] Length = 306 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + LF G+GG L E E F EIN + K + +FP ++ + DI + Sbjct: 1 MTHGSLFSGVGGFDLAAE----WMGWENLFHCEINEWCQKVLRFHFPKSIQYDDITRTDF 56 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 DVL GFPCQPFS AG Sbjct: 57 TPWRGKVDVLTGGFPCQPFSVAG 79 >gi|535137|emb|CAA56493.1| type II DNA-methyltransferase [Bacillus phage phi3T] Length = 326 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + +LFCG G L F E + +I+ +VK Y+ NF + + DI +I Sbjct: 14 FTVLELFCGGG---LGAT-GFKSAGYEIVKALDIDKNAVKAYRHNFGDYVEQADINEIDI 69 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +PD DV+ G PCQ FS AG Sbjct: 70 DSLPDTDVIFGGPPCQDFSVAG 91 >gi|261839852|gb|ACX99617.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori 52] Length = 319 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLEQC----HLKCVGHAEINHGALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+PD D L++GFPCQ FS G Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81 >gi|219122422|ref|XP_002181544.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406820|gb|EEC46758.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 495 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +LF GIGG + LE EC F SEI+ Y NF GDI +++ Sbjct: 141 FSYAELFAGIGGFGVALES----LGGECVFCSEIDEVCRTVYALNFSTKNQHGDIYEVRD 196 Query: 62 QDIPDH-DVLLAGFPCQPFS 80 +D P D+L+ GFPCQPFS Sbjct: 197 RDFPSQLDLLVGGFPCQPFS 216 >gi|293371778|ref|ZP_06618188.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f] gi|292633230|gb|EFF51801.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f] Length = 337 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ L + + ++E + T++ANF +T LI GDI I Sbjct: 1 MNLISLFSGAGGLDLGFHKA----GFKVVTANEFDAKICPTFRANFSDTNLIEGDIRDIP 56 Query: 61 TQDIPDHD-VLLAGFPCQPFSQAG 83 + + PD+ ++ G PCQ +S+AG Sbjct: 57 SSEFPDNIAGIIGGPPCQSWSEAG 80 >gi|330723388|gb|AEC45758.1| DNA-cytosine methyltransferase family protein [Mycoplasma hyorhinis MCLD] Length = 407 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPN--TLIFG 54 +K+ +LF G+GG RL E+T + ++++ P ++ Y +F N + Sbjct: 9 IKVVELFAGVGGFRLGFERTSKL--FKTIWANQWEPNKTKQWAFDCYTKHFGNSDNHVNE 66 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA + +P+HD+L+ GFPCQ +S A Sbjct: 67 DIANV-IDQVPEHDLLVGGFPCQDYSVA 93 >gi|326567346|gb|EGE17461.1| type II DNA modification enzyme [Moraxella catarrhalis BC1] Length = 327 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D GIG RL LE + C SEI+ S TYQ F + GD+ ++ + Sbjct: 3 LKFMDFCSGIGAGRLGLENA----GMCCVAHSEIDLNSDLTYQLFFNDYSNLGDLTQLNS 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+PD DV+LAGFPCQ FS G Sbjct: 59 DDLPDFDVMLAGFPCQTFSIVG 80 >gi|326563801|gb|EGE14052.1| type II DNA modification enzyme [Moraxella catarrhalis 46P47B1] gi|326566814|gb|EGE16953.1| type II DNA modification enzyme [Moraxella catarrhalis 103P14B1] gi|326576727|gb|EGE26634.1| type II DNA modification enzyme [Moraxella catarrhalis 101P30B1] Length = 327 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D GIG RL LE + C SEI+ S TYQ F + GD+ ++ + Sbjct: 3 LKFMDFCSGIGAGRLGLENA----GMCCVAHSEIDLNSDLTYQLFFNDYSNLGDLTQLNS 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+PD DV+LAGFPCQ FS G Sbjct: 59 DDLPDFDVMLAGFPCQTFSIVG 80 >gi|304373002|ref|YP_003856211.1| DNA-cytosine methyltransferase family protein [Mycoplasma hyorhinis HUB-1] gi|304309193|gb|ADM21673.1| DNA-cytosine methyltransferase family protein [Mycoplasma hyorhinis HUB-1] Length = 407 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPN--TLIFG 54 +K+ +LF G+GG RL E+T + ++++ P ++ Y +F N + Sbjct: 9 IKVVELFAGVGGFRLGFERTSKL--FKTIWANQWEPNKTKQWAFDCYTKHFGNSDNHVNE 66 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA + +P+HD+L+ GFPCQ +S A Sbjct: 67 DIANV-IDQVPEHDLLVGGFPCQDYSVA 93 >gi|315654722|ref|ZP_07907628.1| modification methylase NgoPII [Mobiluncus curtisii ATCC 51333] gi|315491186|gb|EFU80805.1| modification methylase NgoPII [Mobiluncus curtisii ATCC 51333] Length = 360 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 + + LF G GG+ L EQ ++E +P +T++AN P+T I GDI + Sbjct: 6 MNVISLFSGCGGLDLGFEQA----GFNIPVANEFDPTIYETFKANHPHTHLIEGDIRGVT 61 Query: 61 TQDI-PDHD----VLLAGFPCQPFSQAG 83 +DI P D ++ G PCQ +S+AG Sbjct: 62 IEDIAPFIDGEVAGIIGGPPCQSWSEAG 89 >gi|325912423|ref|ZP_08174818.1| modification methylase HhaI [Lactobacillus iners UPII 143-D] gi|325475765|gb|EGC78936.1| modification methylase HhaI [Lactobacillus iners UPII 143-D] Length = 314 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%) Query: 26 NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +C +SSE + Y+ +TY+ NF + GDI +I ++IPDHD+L AGFPCQ FS +G Sbjct: 11 GAQCVYSSEWDKYAQETYKMNFGDVP-EGDITQIDEKNIPDHDILCAGFPCQAFSISG 67 >gi|17228429|ref|NP_484977.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] gi|17130280|dbj|BAB72891.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] Length = 477 Score = 104 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 12/89 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K F G G+ L E+ +E + E++ Y +T AN P+ + GDIA Q Sbjct: 74 KAISFFSGAMGLDLGFEKA----GIEILLACEVDKYCRQTIVANKPDIALLGDIAAYSAQ 129 Query: 63 DIPDH--------DVLLAGFPCQPFSQAG 83 DI DH D++L G PCQ FS AG Sbjct: 130 DILDHANLAKEDVDIMLGGPPCQAFSTAG 158 >gi|314994131|ref|ZP_07859441.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133B] gi|313591449|gb|EFR70294.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133B] Length = 130 Score = 104 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 + DLF GIGG L +EQ + +C EI+ ++ ++Y+A + DI + Sbjct: 1 MTFLDLFAGIGGFCLGMEQAGH----QCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSV 56 Query: 60 KTQDIPD---HDVLLAGFPCQPFSQAG 83 + I D+L GFPCQ FS AG Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83 >gi|308176203|ref|YP_003915609.1| DNA (cytosine-5-)-methyltransferase-like protein [Arthrobacter arilaitensis Re117] gi|307743666|emb|CBT74638.1| DNA (cytosine-5-)-methyltransferase-like protein [Arthrobacter arilaitensis Re117] Length = 391 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF G GG+ L +E F E + SEIN + + ++P+ GDI I Sbjct: 32 LRVGSLFSGYGGLDLAVEYQFIA---ETIWFSEINEPVARVFSHHWPDVPNLGDITAIDW 88 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +P D++ GFPCQ S G Sbjct: 89 TTVPSVDIVCGGFPCQDVSTVG 110 >gi|331082114|ref|ZP_08331242.1| hypothetical protein HMPREF0992_00166 [Lachnospiraceae bacterium 6_1_63FAA] gi|330405709|gb|EGG85239.1| hypothetical protein HMPREF0992_00166 [Lachnospiraceae bacterium 6_1_63FAA] Length = 523 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 35/110 (31%), Gaps = 32/110 (29%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------------- 47 +K D F GIGG R LE + C E + ++ +Y A Sbjct: 1 MKFLDFFAGIGGFRRGLELAGH----TCVGFCEFDKFATASYTAMHLMTEEQKNELKILP 56 Query: 48 --------------PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI + + +P D G PCQ FS AG Sbjct: 57 LKKRQKEILKEEYRNGEWYANDIRTVDARSLPKADCWCFGAPCQDFSVAG 106 >gi|209525887|ref|ZP_03274422.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209493696|gb|EDZ94016.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 406 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 4/79 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ LF G GG+ L + + ++ + N + +T++ N + +I +I+ Sbjct: 17 KLISLFSGCGGMDLPFHRA----GFQVVWAIDCNEAACQTFRRNISENIACDNIQEIEIT 72 Query: 63 DIPDHDVLLAGFPCQPFSQ 81 +P D++ GFPCQ FS Sbjct: 73 KVPQADLITGGFPCQDFSM 91 >gi|265751237|ref|ZP_06087300.1| DNA-cytosine methyltransferase [Bacteroides sp. 3_1_33FAA] gi|270294602|ref|ZP_06200804.1| DNA-cytosine methyltransferase [Bacteroides sp. D20] gi|263238133|gb|EEZ23583.1| DNA-cytosine methyltransferase [Bacteroides sp. 3_1_33FAA] gi|270276069|gb|EFA21929.1| DNA-cytosine methyltransferase [Bacteroides sp. D20] Length = 335 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +++ LF G GG+ L + ++E + T++ANFP LI GDI I Sbjct: 1 MELISLFSGAGGLDLGFHKA----GFRTVTANEFDAKICPTFRANFPEVNLIEGDIRDIP 56 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 + + PD ++ G PCQ +S+AG Sbjct: 57 SCEFPDNITGIIGGPPCQSWSEAG 80 >gi|239625135|ref|ZP_04668166.1| EaeI methyltransferase alpha subunit [Clostridiales bacterium 1_7_47_FAA] gi|239519365|gb|EEQ59231.1| EaeI methyltransferase alpha subunit [Clostridiales bacterium 1_7_47FAA] Length = 301 Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ F GIGGI L LE++ +E + EI + K + ++PN + DI K+ Sbjct: 1 MRAASFFSGIGGIDLGLEKS----GIEIVYQCEILSFGQKVLKKHWPNIPLSQDITKLTG 56 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 +DIPD ++ GFPCQ S A Sbjct: 57 KDIPDAEIFAGGFPCQDLSLA 77 >gi|254779672|ref|YP_003057778.1| M.HpyAVIII, a type II cytosine specific DNA methyltransferase [Helicobacter pylori B38] gi|254001584|emb|CAX29633.1| M.HpyAVIII, a type II cytosine specific DNA methyltransferase [Helicobacter pylori B38] Length = 318 Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L D GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I Sbjct: 3 ILTFMDFCSGIGGGRLGLERC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++PD D L++GFPCQ FS G Sbjct: 59 PNNLPDFDALVSGFPCQAFSING 81 >gi|298735876|ref|YP_003728401.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] gi|298355065|emb|CBI65937.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] Length = 312 Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 4/78 (5%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+P Sbjct: 2 DFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLP 57 Query: 66 DHDVLLAGFPCQPFSQAG 83 D D+L++GFPCQ FS G Sbjct: 58 DFDMLVSGFPCQAFSING 75 >gi|188527268|ref|YP_001909955.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Shi470] gi|188143508|gb|ACD47925.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Shi470] Length = 348 Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKETQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|317180646|dbj|BAJ58432.1| Type II DNA modification enzyme [Helicobacter pylori F32] Length = 348 Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKETQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 DCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|327463103|gb|EGF09424.1| modification methylase ScrFIA [Streptococcus sanguinis SK1] Length = 346 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 7/87 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 LKI LF G GG + F+ + +E ++++I+ + K ++ NF T Sbjct: 4 LKIASLFSGGGGTDIGFAGGFDFLDQHYADNQIEIVYANDIDDSANKMFEKNFGITPDNR 63 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81 ++ ++K+ +IP D+L GFPCQ FS Sbjct: 64 NVREVKSNEIPSFDILTGGFPCQSFSV 90 >gi|317179147|dbj|BAJ56935.1| Type II DNA modification enzyme [Helicobacter pylori F30] Length = 351 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKETQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|307293581|ref|ZP_07573425.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1] gi|306879732|gb|EFN10949.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1] Length = 418 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI- 59 +K LF G GG E E + E + Y+ TY+ NFP T +F GDI Sbjct: 1 MKAVSLFAGCGGFCEGAELA----GFEITVAVEWDKYACMTYRENFPKTPLFEGDIHDFL 56 Query: 60 -------KTQDIPDHDVLLAGFPCQPFSQAG 83 + D D++ G PCQ FSQ G Sbjct: 57 KPGSDHETKYKLKDLDLVFGGPPCQGFSQIG 87 >gi|225862882|ref|YP_002748260.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102] gi|225789623|gb|ACO29840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102] Length = 360 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 12/88 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT 61 ++ DLFCG GGI + E +IN +V+T+ NFP++ + DI KIK Sbjct: 4 RVIDLFCGCGGISEGFRLS----GFEIVGGLDINEDAVETFNKNFPDSQAYCADIEKIKN 59 Query: 62 QDIP-------DHDVLLAGFPCQPFSQA 82 DIP D DV++ G PCQ FS A Sbjct: 60 DDIPFMFDLLGDIDVIVGGPPCQGFSSA 87 >gi|150007509|ref|YP_001302252.1| site-specific DNA-methyltransferase [Parabacteroides distasonis ATCC 8503] gi|149935933|gb|ABR42630.1| site-specific DNA-methyltransferase [Parabacteroides distasonis ATCC 8503] Length = 427 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + LF G+GG L E E F EIN + K + +FP ++ + DI + Sbjct: 1 MTHGSLFSGVGGFDLAAE----WMGWENLFHCEINEWCQKVLRFHFPKSIQYDDITRTDF 56 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 DVL GFPCQPFS AG Sbjct: 57 TPWRGKVDVLTGGFPCQPFSTAG 79 >gi|239918514|ref|YP_002958072.1| DNA-methyltransferase Dcm [Micrococcus luteus NCTC 2665] gi|281415284|ref|ZP_06247026.1| DNA-methyltransferase Dcm [Micrococcus luteus NCTC 2665] gi|239839721|gb|ACS31518.1| DNA-methyltransferase Dcm [Micrococcus luteus NCTC 2665] Length = 315 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ F GIGG L E + + EI + + + ++P +I + Sbjct: 13 LRMASFFTGIGGFDLGFENA----GIRTVYQCEIKDFCNQVLEYHWPEIPRGTNIELVNP 68 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 DIP+ D+ GFPCQ S A Sbjct: 69 DDIPEADIWTGGFPCQDISLA 89 >gi|206975132|ref|ZP_03236046.1| modification methylase HaeIII [Bacillus cereus H3081.97] gi|206746553|gb|EDZ57946.1| modification methylase HaeIII [Bacillus cereus H3081.97] Length = 352 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 10/87 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 + DLF G+GG+ L EQ E ++E + Y+ N NT +I GDIA++ Sbjct: 4 TVIDLFAGVGGLSLGFEQ----EGFEVVLANEYDESIANAYKKNHRNTKMIVGDIAELDI 59 Query: 62 QDI-----PDHDVLLAGFPCQPFSQAG 83 +++ DV++ G PCQ FSQ G Sbjct: 60 KNVFCPYVGKIDVIIGGPPCQGFSQKG 86 >gi|1709155|sp|P50196|MTE8_ECOLX RecName: Full=Modification methylase Eco47II; Short=M.Eco47II; AltName: Full=Cytosine-specific methyltransferase Eco47II gi|558571|emb|CAA57629.1| site-specific DNA-methyltransferase (cytosine-specific) [Escherichia coli] gi|1098127|prf||2115269B methyltransferase Eco47IIM Length = 417 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + +LF G GG+ L LE+ ++ +EI+ ++ KT + N P ++ GD++++ Sbjct: 81 YTVLELFAGAGGMALGLEKA----GLKSVLLNEIDSHACKTLRKNRPEWNVVEGDVSQVD 136 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 + DVL GFPCQ FS AG Sbjct: 137 FTPYRNTVDVLAGGFPCQAFSYAG 160 >gi|314940406|ref|ZP_07847565.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133a04] gi|313640387|gb|EFS04967.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TX0133a04] Length = 130 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 + DLF GIGG L +EQ + +C EI+ ++ ++Y+A + DI + Sbjct: 1 MTFLDLFAGIGGFCLGMEQAGH----QCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSV 56 Query: 60 KTQDIPD---HDVLLAGFPCQPFSQAG 83 + I D+L GFPCQ FS AG Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83 >gi|281491829|ref|YP_003353809.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp. lactis KF147] gi|281375540|gb|ADA65046.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp. lactis KF147] Length = 351 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 7/87 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 +I LF G GG + F+ VE F+++I + + ++ NF Sbjct: 4 FRIASLFSGGGGTDIGFSGGFDFLGNHYKNNNVEIVFANDIEEKANEFFEENFKLKPESR 63 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81 I I + ++PD D+L GFPCQ FS Sbjct: 64 SIRDIDSSELPDFDILTGGFPCQSFSV 90 >gi|113478170|ref|YP_724231.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] gi|110169218|gb|ABG53758.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] Length = 379 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 4/79 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI LF G GG+ L ++ + ++ + + Y+ +T++ N N + I I Sbjct: 16 KIISLFSGCGGMDLPF----HYTGFKLVWAIDSDLYACRTFRRNISNIIENNQIENINIA 71 Query: 63 DIPDHDVLLAGFPCQPFSQ 81 ++P+ D+++ GFPCQ FS Sbjct: 72 EVPEADLIIGGFPCQDFSM 90 >gi|257464589|ref|ZP_05628960.1| putative 5-methylcytosine methyltransferase [Actinobacillus minor 202] gi|257450249|gb|EEV24292.1| putative 5-methylcytosine methyltransferase [Actinobacillus minor 202] Length = 331 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 L DLF G GG L ++ S EI PY +TY+ANFP I D+ ++ Sbjct: 3 LTYIDLFSGAGGFSLGFDR----VGFCQLLSVEIEPYYCETYRANFPKHHILQRDLTELP 58 Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83 ++ DV++ G PCQ FS AG Sbjct: 59 DDELLVLLDNQKVDVVIGGPPCQGFSMAG 87 >gi|168821212|ref|ZP_02833212.1| modification methylase HaeIII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205342142|gb|EDZ28906.1| modification methylase HaeIII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088731|emb|CBY98489.1| C-5 cytosine-specific DNA methylase family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 361 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +++ LF G GG+ + + F++++ + KT FP+T + GDI++I Sbjct: 12 IRVLSLFSGCGGMDFGITSA----GGDIVFANDVVENACKTLGNYFPDTDIRHGDISQI- 66 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 Q PD D+++ G+PCQ FS AG Sbjct: 67 -QSFPDVDIVVGGYPCQSFSMAG 88 >gi|317010732|gb|ADU84479.1| type II DNA modification (methyltransferase) [Helicobacter pylori SouthAfrica7] Length = 348 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 DCYNLPCTSIDILLGGPPCQSYSTLG 83 >gi|228957327|ref|ZP_04119088.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802360|gb|EEM49216.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pakistani str. T13001] Length = 427 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ +IP+HD+L+ GFPCQ +S A Sbjct: 58 RDIAEAWP-EIPEHDLLVGGFPCQDYSVA 85 >gi|229078249|ref|ZP_04210814.1| Modification methylase Sau3AI [Bacillus cereus Rock4-2] gi|228705049|gb|EEL57470.1| Modification methylase Sau3AI [Bacillus cereus Rock4-2] Length = 427 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ +IP+HD+L+ GFPCQ +S A Sbjct: 58 RDIAEAWP-EIPEHDLLVGGFPCQDYSVA 85 >gi|229171704|ref|ZP_04299279.1| Modification methylase Sau3AI [Bacillus cereus MM3] gi|228611850|gb|EEK69097.1| Modification methylase Sau3AI [Bacillus cereus MM3] Length = 430 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ +IP+HD+L+ GFPCQ +S A Sbjct: 58 RDIAEAWP-EIPEHDLLVGGFPCQDYSVA 85 >gi|91215328|ref|ZP_01252299.1| modification methylase (Eco47II, Sau96I) [Psychroflexus torquis ATCC 700755] gi|91186280|gb|EAS72652.1| modification methylase (Eco47II, Sau96I) [Psychroflexus torquis ATCC 700755] Length = 412 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 6/82 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + +LF G GG+ + LEQ+ ++C +EI+ ++ +T + N P+ ++ GDI + Sbjct: 78 VLELFAGAGGLAIGLEQS----GIKCTALNEIDKWACQTLRTNRPSWNILEGDIKNFDFR 133 Query: 63 DIP-DHDVLLAGFPCQPFSQAG 83 D++ GFPCQ FS AG Sbjct: 134 QYENKVDIVTGGFPCQAFSYAG 155 >gi|229108527|ref|ZP_04238142.1| Modification methylase Sau3AI [Bacillus cereus Rock1-15] gi|228674934|gb|EEL30163.1| Modification methylase Sau3AI [Bacillus cereus Rock1-15] Length = 427 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ +IP+HD+L+ GFPCQ +S A Sbjct: 58 RDIAEAWP-EIPEHDLLVGGFPCQDYSVA 85 >gi|268589649|ref|ZP_06123870.1| modification methylase Eco47II [Providencia rettgeri DSM 1131] gi|291314961|gb|EFE55414.1| modification methylase Eco47II [Providencia rettgeri DSM 1131] Length = 424 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + +LF G GG+ L LE+ +EI+ ++ T + N P+ ++ GD+A I Sbjct: 75 FTVLELFAGAGGMALGLEKAGLSA----VMLNEIDKHACNTLRLNRPDWNVVEGDVAGID 130 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 DVL GFPCQ FS AG Sbjct: 131 FSQYKGKVDVLAGGFPCQAFSYAG 154 >gi|229101666|ref|ZP_04232385.1| Modification methylase Sau3AI [Bacillus cereus Rock3-28] gi|228681735|gb|EEL35893.1| Modification methylase Sau3AI [Bacillus cereus Rock3-28] Length = 427 Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ +IP+HD+L+ GFPCQ +S A Sbjct: 58 RDIAEAWP-EIPEHDLLVGGFPCQDYSVA 85 >gi|237742049|ref|ZP_04572530.1| modification methylase HpaII [Fusobacterium sp. 4_1_13] gi|229429697|gb|EEO39909.1| modification methylase HpaII [Fusobacterium sp. 4_1_13] Length = 385 Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 9/86 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57 K DLF GIGGIR E T E S+EI+ Y+ +TY+ F N F D++ Sbjct: 7 YKTIDLFSGIGGIRKGFELTGF---FENIISAEIDKYACETYKHLF-NENPFNDVSSEEF 62 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 KIK + + ++D+LLAGFPCQ FS AG Sbjct: 63 KIKLESL-EYDILLAGFPCQSFSIAG 87 >gi|238751088|ref|ZP_04612584.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380] gi|238710778|gb|EEQ03000.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380] Length = 362 Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +++ LF G GG+ +E + F+++I + KT FP++ + GDI+ I Sbjct: 12 IRVLSLFSGGGGMDFGIESA----GGKVVFANDIVENACKTLDKYFPDSDIRLGDISNI- 66 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 Q P DV++ G+PCQ FS AG Sbjct: 67 -QSFPCVDVVVGGYPCQSFSMAG 88 >gi|15611502|ref|NP_223153.1| type II DNA modification (methyltransferase [Helicobacter pylori J99] gi|4154963|gb|AAD06007.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter pylori J99] Length = 351 Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFS---THPYFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57 Query: 60 KTQDIPDH--DVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPRVPIDILLGGPPCQSYSTLG 83 >gi|15645735|ref|NP_207912.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter pylori 26695] gi|2314272|gb|AAD08164.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter pylori 26695] Length = 312 Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 4/78 (5%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+P Sbjct: 2 DFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLP 57 Query: 66 DHDVLLAGFPCQPFSQAG 83 D D L++GFPCQ FS G Sbjct: 58 DFDALISGFPCQAFSING 75 >gi|168205340|ref|ZP_02631345.1| putative modification methylase Eco47II [Clostridium perfringens E str. JGS1987] gi|170663208|gb|EDT15891.1| putative modification methylase Eco47II [Clostridium perfringens E str. JGS1987] Length = 437 Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 3/82 (3%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++++ +F G G + + ++ + F+S+I + ++Y+ N N ++ I +I Sbjct: 118 IIRVVSMFSGAGMLDYAFHK---DQDFKIVFASDIMKEACESYRENIGNHIVNKSITEIN 174 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 + +IP DV+L G PC+PFS A Sbjct: 175 SNEIPVADVILGGVPCKPFSNA 196 >gi|317012300|gb|ADU82908.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Lithuania75] Length = 348 Score = 103 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKKTQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 DCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|261839303|gb|ACX99068.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori 52] Length = 348 Score = 103 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKKTQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|157691446|ref|YP_001485908.1| DNA (cytosine-5-)-methyltransferase [Bacillus pumilus SAFR-032] gi|157680204|gb|ABV61348.1| DNA (cytosine-5-)-methyltransferase [Bacillus pumilus SAFR-032] Length = 548 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 9/86 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ DLF G GG+ L QT E + EIN + +TY N + DI I + Sbjct: 5 KVLDLFAGAGGLSLGFSQTGR---FETVMAVEINENAAQTYTKNHKIEVNTQDIRSINFK 61 Query: 63 D------IPDHDVLLAGFPCQPFSQA 82 D + + +++ G PCQ FS A Sbjct: 62 DYKKYPILKEVSLVIGGPPCQGFSNA 87 >gi|330996255|ref|ZP_08320145.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] gi|329573759|gb|EGG55350.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] Length = 351 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 36/83 (43%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGG L E F EIN + + +FPN + DI K Sbjct: 5 LTHGSLFSGIGGFDLAAE----WTGWTNVFHCEINEFCTRILNHHFPNAEHYADITKTDF 60 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 DVL GFPCQPFS AG Sbjct: 61 TPWRGRIDVLSGGFPCQPFSLAG 83 >gi|317181803|dbj|BAJ59587.1| Type II DNA modification enzyme [Helicobacter pylori F57] Length = 351 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKKTQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|124009862|ref|ZP_01694529.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134] gi|123984098|gb|EAY24464.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134] Length = 353 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF G+GG L E+ F+ E NP+ + +P++ + DI +I Sbjct: 1 MRHASLFSGLGGFDLAAER----MGWVNVFTVENNPFCQTILRHYWPDSTHYEDIRQIDF 56 Query: 62 QD-IPDHDVLLAGFPCQPFSQAG 83 D+L GFPCQPFSQAG Sbjct: 57 SPYYGQIDLLTGGFPCQPFSQAG 79 >gi|119512301|ref|ZP_01631388.1| DNA modification methylase [Nodularia spumigena CCY9414] gi|119463081|gb|EAW44031.1| DNA modification methylase [Nodularia spumigena CCY9414] Length = 502 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 8/84 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKI 59 DLF GIGG ++ L H SEIN ++KTY NF + GDI KI Sbjct: 6 FTFIDLFAGIGGFKMALSNNGGHS----LGFSEINQDAIKTYCDNFQIEPSYNLGDITKI 61 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K ++P HD+L AG PCQ +S AG Sbjct: 62 K--ELPPHDLLTAGVPCQSWSIAG 83 >gi|256375192|ref|YP_003098852.1| DNA-cytosine methyltransferase [Actinosynnema mirum DSM 43827] gi|255919495|gb|ACU35006.1| DNA-cytosine methyltransferase [Actinosynnema mirum DSM 43827] Length = 361 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQ 62 + DLF G GG+ E + E + ++ TY ANF + + + DIA + Sbjct: 1 MIDLFAGCGGMTSGFTSA----GFEPVMAVEHDLHAASTYAANFGEDHVRWADIAAVPDS 56 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +P DV++ G PCQ FS G Sbjct: 57 AVPRVDVVVGGPPCQGFSTLG 77 >gi|328947038|ref|YP_004364375.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447362|gb|AEB13078.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 466 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF G+GG L +++ +C F+SE+ Y+ N+ FGDI K+ Sbjct: 26 FSFIDLFAGLGGFHLAMQK----LGGKCVFASELKEDLRILYKENYG-IDCFGDINKVDI 80 Query: 62 Q-DIPD-HDVLLAGFPCQPFSQAG 83 DIP D+L AGFPCQPFS+AG Sbjct: 81 DKDIPKKFDMLCAGFPCQPFSKAG 104 >gi|166237008|gb|ABY86226.1| BsaHI DNA methyltransferase [Geobacillus stearothermophilus] Length = 323 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ DLF G GG+ E E + E +++ Y+ NF + +I D++ ++ Sbjct: 1 MRVIDLFAGCGGMSKGFENA----GYEIVAAFENWKDAIEVYKKNFKHPVIEYDLSNVED 56 Query: 62 QDIPDH---DVLLAGFPCQPFSQAG 83 +I D+++ G PCQ +S AG Sbjct: 57 YNIFKQFKPDMIIGGPPCQDYSSAG 81 >gi|72386611|ref|XP_843730.1| cytosine-specific DNA methylase [Trypanosoma brucei TREU927] gi|62175408|gb|AAX69550.1| cytosine-specific DNA methylase, putative [Trypanosoma brucei] gi|70800262|gb|AAZ10171.1| cytosine-specific DNA methylase, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 621 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 21/99 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--------PNT--- 50 ++LF G+G R+ LE+ +C F+ E P++ Y AN N Sbjct: 226 FTFSELFAGMGMFRVGLER----IGGKCVFAVECAPHARSVYHANHHLPRRNSCGNEALP 281 Query: 51 ------LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + GDI + + P HDVL AGFPCQ F++AG Sbjct: 282 ATRRPVPLVGDITTVPSHYFPHHDVLTAGFPCQSFAKAG 320 >gi|229131851|ref|ZP_04260720.1| Modification methylase Sau3AI [Bacillus cereus BDRD-ST196] gi|228651598|gb|EEL07564.1| Modification methylase Sau3AI [Bacillus cereus BDRD-ST196] Length = 427 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N + + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NENFDVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ Q+IP+HD+L+ GFPCQ +S A Sbjct: 58 KDIAE-AWQEIPEHDLLVGGFPCQDYSVA 85 >gi|317013900|gb|ADU81336.1| type II DNA modification (methyltransferase) [Helicobacter pylori Gambia94/24] Length = 351 Score = 102 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H + E ++++I+ ++ +YQAN T I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFS---VHPHFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HYHNLPCVPIDILLGGPPCQSYSTLG 83 >gi|308172812|ref|YP_003919517.1| DNA (cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens DSM 7] gi|307605676|emb|CBI42047.1| DNA (cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens DSM 7] Length = 406 Score = 102 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + +LFCG G + + + + + +VK Y+ NF + + DI+ + Sbjct: 105 MNVLELFCGGGLGAIGFKAA----GYNIVKALDFDKNAVKAYRHNFGDYVEQADISAVDI 160 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +PD DV+ G PCQ FS AG Sbjct: 161 DSLPDTDVIFGGPPCQDFSVAG 182 >gi|225158172|ref|ZP_03725067.1| DNA methyltransferase [Opitutaceae bacterium TAV2] gi|224802676|gb|EEG20930.1| DNA methyltransferase [Opitutaceae bacterium TAV2] Length = 414 Score = 102 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 LF GIGG L ++ + +C + EI+ + FP F DI ++ Sbjct: 16 TFGSLFAGIGGFDLGFKRAGMN---DC-WQIEIDENCRDLLRRRFPTCEKFADIREVDVS 71 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + DV+ GFPCQ S AG Sbjct: 72 TLAPVDVICGGFPCQDLSVAG 92 >gi|150024829|ref|YP_001295655.1| modification methyltransferase Sau3AI [Flavobacterium psychrophilum JIP02/86] gi|149771370|emb|CAL42839.1| Probable modification methyltransferase Sau3AI [Flavobacterium psychrophilum JIP02/86] Length = 431 Score = 102 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 17/98 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHR-----------NVECFFSSEINP-----YSVKTYQA 45 +K+ +LF G+GG RL LE N + E +S++ P ++ Y+ Sbjct: 5 IKVVELFAGVGGFRLGLEGWNNKSASSNYKENFESSYEIVWSNQWEPSTKVQHASMVYET 64 Query: 46 NFPNTLIFG-DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 + DI+ ++ IPDHD+L+ GFPCQ +S A Sbjct: 65 RWDKKNHCNQDISTVEVDIIPDHDLLVGGFPCQDYSVA 102 >gi|308182632|ref|YP_003926759.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori PeCan4] gi|308064817|gb|ADO06709.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori PeCan4] Length = 351 Score = 102 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHEEVQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|212694208|ref|ZP_03302336.1| hypothetical protein BACDOR_03734 [Bacteroides dorei DSM 17855] gi|212663274|gb|EEB23848.1| hypothetical protein BACDOR_03734 [Bacteroides dorei DSM 17855] Length = 370 Score = 102 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 8/85 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF G GG+ + + H F++++ + TY+ N + +I GDI + Sbjct: 12 IRTISLFSGAGGLDIGAIKAGAH----VVFANDMMKEACLTYKENIGDHIIQGDINTL-F 66 Query: 62 QDIPDH---DVLLAGFPCQPFSQAG 83 +I D+++ G PCQ FS AG Sbjct: 67 DEIGKVDNPDLVIGGPPCQGFSVAG 91 >gi|255280633|ref|ZP_05345188.1| modification methylase DdeI [Bryantella formatexigens DSM 14469] gi|255269098|gb|EET62303.1| modification methylase DdeI [Bryantella formatexigens DSM 14469] Length = 378 Score = 102 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 13/92 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 MLK DLF G GGI + C +++I+ + T+ N P + D+ ++ Sbjct: 1 MLKTIDLFAGAGGITEGFRKA----GYVCVCANDIDEEAKHTFTYNHPTVPFVLKDVREV 56 Query: 60 KTQDI--------PDHDVLLAGFPCQPFSQAG 83 ++ + DV+ G PCQ FS AG Sbjct: 57 TAAELLAAANCTAAEIDVITGGPPCQGFSLAG 88 >gi|315586449|gb|ADU40830.1| possible DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A] Length = 351 Score = 102 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H + E ++++I+ ++ +YQAN T I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPHFELIWANDIDKDAILSYQANHRKTQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 + P D+LL G PCQ +S G Sbjct: 58 NCHNFPCVSIDILLGGPPCQSYSTLG 83 >gi|167772229|ref|ZP_02444282.1| hypothetical protein ANACOL_03604 [Anaerotruncus colihominis DSM 17241] gi|167665332|gb|EDS09462.1| hypothetical protein ANACOL_03604 [Anaerotruncus colihominis DSM 17241] Length = 603 Score = 102 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M + LF GIGG L + +E ++SEI + ++ + FP+ L GDI K+ Sbjct: 1 MPTLGSLFDGIGGFPLAAVR----NGIEPVWASEIEAFPIEVTRKRFPSILHVGDITKLN 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++P D++ G PCQ S AG Sbjct: 57 GAELPPVDIITGGSPCQDLSVAG 79 >gi|160939012|ref|ZP_02086363.1| hypothetical protein CLOBOL_03906 [Clostridium bolteae ATCC BAA-613] gi|158437975|gb|EDP15735.1| hypothetical protein CLOBOL_03906 [Clostridium bolteae ATCC BAA-613] Length = 168 Score = 102 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ D FCG GG+ + + E + + + Y+V++Y+AN + + DI ++ Sbjct: 5 LKVNDFFCGCGGMGIAFKNA----GYEIAGAWDFDKYAVESYRANVGDHVQKADIKELHQ 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIP DV GFPCQ S AG Sbjct: 61 ADIPQADVWAFGFPCQDLSVAG 82 >gi|182417652|ref|ZP_02948971.1| modification methylase Sau3AI [Clostridium butyricum 5521] gi|237668746|ref|ZP_04528730.1| modification methylase Sau3AI (Cytosine-specificmethyltransferase Sau3AI) (M.Sau3AI) [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378376|gb|EDT75907.1| modification methylase Sau3AI [Clostridium butyricum 5521] gi|237657094|gb|EEP54650.1| modification methylase Sau3AI (Cytosine-specificmethyltransferase Sau3AI) (M.Sau3AI) [Clostridium butyricum E4 str. BoNT E BL5262] Length = 426 Score = 102 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 12/90 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFP-----NTLI 52 I +LF G+GG R+ E++ + ++++ P ++ + Y+++F + Sbjct: 5 TICELFAGVGGFRVGFEKS--SPEWKTVWANQWEPSKKIQHAFECYKSHFETSGGIDEFS 62 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI+K+ + IPDH VL+ GFPCQ +S A Sbjct: 63 NTDISKVPEEHIPDHTVLVGGFPCQDYSVA 92 >gi|108563484|ref|YP_627800.1| type II DNA modification enzyme [Helicobacter pylori HPAG1] gi|107837257|gb|ABF85126.1| type II DNA modification enzyme [Helicobacter pylori HPAG1] Length = 313 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 4/78 (5%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 D GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I D+P Sbjct: 2 DFCSGIGGGRLGLERC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLP 57 Query: 66 DHDVLLAGFPCQPFSQAG 83 D D L++GFPCQ FS G Sbjct: 58 DFDALISGFPCQAFSING 75 >gi|254411906|ref|ZP_05025682.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196181628|gb|EDX76616.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 456 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDI 56 DLF GIGG R+ LE+ +C SEI+ +V Y+ NF + L GDI Sbjct: 28 FTFVDLFAGIGGFRIPLEE----LGGKCLGYSEIDKEAVNVYKKNFISYINADELYLGDI 83 Query: 57 AKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 I +P + D+L+ G PCQP+S AG Sbjct: 84 --IALHKLPFEVDILVGGVPCQPWSIAG 109 >gi|206972340|ref|ZP_03233286.1| C-5 cytosine-specific DNA methylase [Bacillus cereus AH1134] gi|206732665|gb|EDZ49841.1| C-5 cytosine-specific DNA methylase [Bacillus cereus AH1134] Length = 503 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+I LF G G L + + F+ E + +VKTY+ N ++ DI Sbjct: 182 LQIVSLFSGSGVFDLGF----KNEGFDIIFAIEKDEDAVKTYRHNLGEHVVCHDITTYPK 237 Query: 62 QDIPDHDVLLAGFPCQPFS 80 +DIP+ +++ G PCQ FS Sbjct: 238 KDIPNAPIIIGGPPCQGFS 256 >gi|1709158|sp|P50192|MTHA_HAEPH RecName: Full=Modification methylase HphIA; Short=M.HphIA; AltName: Full=Cytosine-specific methyltransferase HphIA; AltName: Full=M.Hphi(C) gi|732729|emb|CAA59690.1| site-specific DNA-methyltransferase (cytosine-specific) [Haemophilus parahaemolyticus] Length = 372 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L DLF G GG L ++ S EI P+ TY+ANFP+ ++ D+ + Sbjct: 45 LTYIDLFSGAGGFSLGFDRA----GFHQLLSVEIEPHYCDTYRANFPDHQVLQQDLTTLS 100 Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83 ++ DV++ G PCQ FS AG Sbjct: 101 DDNLLRHINHRKVDVVIGGPPCQGFSMAG 129 >gi|14520267|ref|NP_125742.1| modification methylase [Pyrococcus abyssi GE5] gi|5457482|emb|CAB48973.1| Citosine-specific modificatrion methylase [Pyrococcus abyssi GE5] Length = 309 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 5/80 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +K+ DLF G GG L E + E KTY NFP +I DI I Sbjct: 8 MKVLDLFAGAGGFSLGF----KLVGFEIVAAIENFKPKAKTYSHNFPGVKVIAQDIKVIS 63 Query: 61 TQDIPDHDVLLAGFPCQPFS 80 +I D DV++ G PC+PF+ Sbjct: 64 PDEIGDVDVIIGGPPCEPFT 83 >gi|317054725|ref|YP_004103193.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus] gi|294869157|gb|ADF47149.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus] Length = 363 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 11/90 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 M KI DLF G GG+ EQ + + E + + KT+ N P T +F DI I Sbjct: 1 MPKIVDLFAGAGGMTEGFEQA----GYQSALAIEYDEMAAKTFSFNHPQTPVFIKDIRTI 56 Query: 60 KTQDIPDH------DVLLAGFPCQPFSQAG 83 + + + + DVL G PCQ FS AG Sbjct: 57 QEESVREALKYSPIDVLCGGPPCQGFSLAG 86 >gi|317127846|ref|YP_004094128.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] gi|315472794|gb|ADU29397.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] Length = 564 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAK 58 LK+ DLF G GG+ EQT + E + E N + KT++ N F DI Sbjct: 4 LKVIDLFAGAGGLSAGFEQT---DSFEVIAAIENNKNARKTFRRNHKSLRKEFFFRDIKD 60 Query: 59 IKTQDIPD-----HDVLLAGFPCQPFSQA 82 +K + I + D+++ G PCQ FS A Sbjct: 61 LKYEQINELKKIGIDIVIGGPPCQGFSNA 89 >gi|291514217|emb|CBK63427.1| DNA-methyltransferase (dcm) [Alistipes shahii WAL 8301] Length = 296 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + +LF GIGG L L Q + + SEI+ ++V ++ NFP+ G + I Sbjct: 1 MNLLELFSGIGGFSLGLRQAG--FTFDKVYFSEIDRHAVANFKHNFPHAQHVGSVCDITG 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 I D++ G PCQ FS AG Sbjct: 59 TSIERPDIITFGSPCQNFSAAG 80 >gi|330718183|ref|ZP_08312783.1| cytosine-specific methyltransferase [Leuconostoc fallax KCTC 3537] Length = 414 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 12/91 (13%) Query: 2 LK--ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDI 56 +K I F G+GGI L E +++E + + T++ NF L DI Sbjct: 1 MKNDIVSFFAGVGGIDLGFEDAGE---YRTVYANEFDKNAQHTFETNFKSRGTYLDRRDI 57 Query: 57 AKIKTQDI----PDHDVLLAGFPCQPFSQAG 83 ++ +++ P+ VLLAGFPCQPFS AG Sbjct: 58 KQVDAKEVKAKAPNASVLLAGFPCQPFSIAG 88 >gi|229095557|ref|ZP_04226542.1| Modification methylase Sau3AI [Bacillus cereus Rock3-29] gi|228687859|gb|EEL41752.1| Modification methylase Sau3AI [Bacillus cereus Rock3-29] Length = 427 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE ++N E + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NKNFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ ++P+HD+L+ GFPCQ +S A Sbjct: 58 RDIAEAWP-EVPEHDLLVGGFPCQDYSVA 85 >gi|194017229|ref|ZP_03055841.1| site-specific DNA-methyltransferase [Bacillus pumilus ATCC 7061] gi|194011097|gb|EDW20667.1| site-specific DNA-methyltransferase [Bacillus pumilus ATCC 7061] Length = 327 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K +LF GIGGI L E +E E PY K NFPN +F D+ + Sbjct: 1 MKSIELFAGIGGIALAAEWA----GIETVAFCEREPYCQKLLNQNFPNVPVFDDVRTLNR 56 Query: 62 QDIPD---------HDVLLAGFPCQPFSQAG 83 Q + D D++ GFPCQP+S AG Sbjct: 57 QLLEDKGVIEPNGTIDIISGGFPCQPYSSAG 87 >gi|145592627|ref|YP_001156924.1| C-5 cytosine-specific DNA methylase [Salinispora tropica CNB-440] gi|145301964|gb|ABP52546.1| C-5 cytosine-specific DNA methylase [Salinispora tropica CNB-440] Length = 236 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L + +LF GIGG+ L L++ + EINP+ ++P D+ Sbjct: 6 LNVLELFAGIGGLSLGLQRA----GLRIVGHVEINPFCRAVLHKHWPEVPCHDDVRTAAA 61 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D P DV+ G+PCQP S AG Sbjct: 62 WWRSTDRPRVDVVAGGYPCQPESTAG 87 >gi|116750223|ref|YP_846910.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB] gi|116699287|gb|ABK18475.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB] Length = 399 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI--- 59 ++ DLF G GG+ L H + ++++ N Y+V+TY +NF + GDI + Sbjct: 21 RLIDLFSGAGGMTLGFTSRMGHF-FQPVWANDFNMYAVQTYNSNFGTHCVPGDIVDLLRD 79 Query: 60 KTQDIPDHDVLLAGFPCQPFSQ 81 P +V++ G PCQ FS Sbjct: 80 PAAAPPRAEVVIGGPPCQGFSL 101 >gi|124005671|ref|ZP_01690510.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134] gi|123988739|gb|EAY28345.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134] Length = 352 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF G+GG L ++ F+ E NP+ + +P+T+ + DI + Sbjct: 1 MRHASLFSGLGGFDLAAQR----MGWVNVFTVENNPFCQAILRHYWPDTIHYEDIRQTNF 56 Query: 62 QD-IPDHDVLLAGFPCQPFSQAG 83 D++ GFPCQPFS AG Sbjct: 57 HPYYGKVDIITGGFPCQPFSNAG 79 >gi|124009653|ref|ZP_01694325.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134] gi|123984703|gb|EAY24688.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134] Length = 354 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 ++ LF G+GG L ++ F+ E NP+ + +P+T+ + DI + Sbjct: 1 MRHASLFSGLGGFDLAAQR----MGWTNVFTVENNPFCQTILRHYWPDTIHYEDIRQTDF 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 T D+L GFPCQPFSQAG Sbjct: 57 TPHYGQIDLLTGGFPCQPFSQAG 79 >gi|302870498|ref|YP_003839135.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC 27029] gi|302573357|gb|ADL49559.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC 27029] Length = 383 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 4/76 (5%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 +F G GG+ L EQT + V ++++I P++V+TY+ N ++ DIA++ D+ Sbjct: 11 VSMFSGCGGMDLGAEQT---KRVGVVWANDIEPWAVETYRRNLGRHIVAEDIAELDVPDV 67 Query: 65 PDHDVLLAGFPCQPFS 80 P D+LLAG PCQ +S Sbjct: 68 P-CDILLAGPPCQDYS 82 >gi|261400519|ref|ZP_05986644.1| modification methylase Sau3AI [Neisseria lactamica ATCC 23970] gi|269209782|gb|EEZ76237.1| modification methylase Sau3AI [Neisseria lactamica ATCC 23970] Length = 383 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 11/90 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-- 54 +K+ +LF G+GG R+ LE E ++++ P + + Y +FPN+ Sbjct: 1 MKVLELFAGVGGFRIGLENANKDL-FETKWANQWEPSRKSQDAFEVYDYHFPNSENINIS 59 Query: 55 --DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI K ++ D D+++ GFPCQ +S A Sbjct: 60 IADITNEKFSEM-DADMIVGGFPCQDYSVA 88 >gi|254450593|ref|ZP_05064030.1| modification methylase FnuDI [Octadecabacter antarcticus 238] gi|198264999|gb|EDY89269.1| modification methylase FnuDI [Octadecabacter antarcticus 238] Length = 365 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K LF G GG+ ++ + F++++ Y+ +T++ F +T I GDI +I Sbjct: 1 MKTISLFSGCGGMDFGIKAA----GCDVVFANDVMKYAAETHRKYFKDTDFIHGDIREI- 55 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + P D+++ G+PCQ FS G Sbjct: 56 -SNFPSTDLVVGGYPCQSFSMGG 77 >gi|124004276|ref|ZP_01689122.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134] gi|123990346|gb|EAY29845.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134] Length = 391 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 ++ LF G+GG L E+ F+ E NP+ + +P+T + DI + Sbjct: 1 MRHASLFSGMGGFDLAAER----MGWVNVFTVENNPFCQTILRHYWPDTTHYEDIRQTDF 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 T D+L GFPCQPFSQAG Sbjct: 57 TPHYGQIDLLTGGFPCQPFSQAG 79 >gi|901818|gb|AAA69959.1| 5C-DNA methyltransferase [Bacillus phage H2] Length = 503 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQ--ANFPNTLIFGDIA 57 L++ LF GIG E + E SEI+ Y++K+Y N FGD++ Sbjct: 4 LRVMSLFSGIG----AFEAALRNIGVEYELVGFSEIDKYAIKSYCAIHNVDEQSNFGDVS 59 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 KI + +P+ D+L+ G PCQ FS G Sbjct: 60 KIDKKKLPEFDLLVGGSPCQSFSVRG 85 >gi|255530844|ref|YP_003091216.1| DNA-cytosine methyltransferase [Pedobacter heparinus DSM 2366] gi|255343828|gb|ACU03154.1| DNA-cytosine methyltransferase [Pedobacter heparinus DSM 2366] Length = 350 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 9/91 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDI- 56 ++ +LF GIGG R + + EC SEI+ ++ TY AN+ + DI Sbjct: 1 MRYIELFSGIGGFRNAADHLTVDTDQPFECIAFSEIDRHAKSTYLANYNTEGEVQMDDII 60 Query: 57 ----AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 K +++PD D+LL GFPCQ FS G Sbjct: 61 SFTDEKKNIENLPDFDLLLGGFPCQAFSLLG 91 >gi|291087089|ref|ZP_06345376.2| modification methylase HpaII [Clostridium sp. M62/1] gi|291076158|gb|EFE13522.1| modification methylase HpaII [Clostridium sp. M62/1] Length = 490 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DL GIGGIR E + E S+EI+ Y+ +TY+ F + D+ + Sbjct: 20 MRTIDLCSGIGGIRRGFELAGD---FENVLSAEIDKYACQTYEHLFGDDAR-NDVTNDEF 75 Query: 62 QDI---PDHDVLLAGFPCQPFSQAG 83 + + D+DVLLAGFPCQPFS+ G Sbjct: 76 RKLVCRTDYDVLLAGFPCQPFSKIG 100 >gi|296330570|ref|ZP_06873048.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674618|ref|YP_003866290.1| putative C-5 cytosine-specific DNA methylase [Bacillus subtilis subsp. spizizenii str. W23] gi|296152252|gb|EFG93123.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412862|gb|ADM37981.1| putative C-5 cytosine-specific DNA methylase [Bacillus subtilis subsp. spizizenii str. W23] Length = 298 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K +LF GIGGI L E +E E P+ K NF IF D+ + Sbjct: 1 MKSIELFAGIGGIALAAEWA----GIETVAFCEREPFCQKVLNKNFRGVPIFDDVRTLNR 56 Query: 62 QDIPD---------HDVLLAGFPCQPFSQAG 83 Q + + D++ GFPCQP+S AG Sbjct: 57 QLLEEKGVIEPGGTIDIISGGFPCQPYSIAG 87 >gi|228913600|ref|ZP_04077228.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228846011|gb|EEM91034.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 427 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ ++P+HD+L+ GFPCQ +S A Sbjct: 58 RDIAEAWP-EVPEHDLLVGGFPCQDYSVA 85 >gi|228944657|ref|ZP_04107027.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228815117|gb|EEM61368.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 427 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 11/89 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+K+ +LF G+GG RL LE + N E + ++ P ++ Y F N I Sbjct: 1 MVKVVELFAGVGGFRLGLEA---NENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DIA+ ++P+HD+L+ GFPCQ +S A Sbjct: 58 RDIAEAWP-EVPEHDLLVGGFPCQDYSVA 85 >gi|2894387|emb|CAA74997.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase (C2) [Bacillus pumilus] Length = 392 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 9/88 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59 M+ DLF G GG L L+ ++ + E++ ++ +T++ NFP + +I + Sbjct: 1 MITSLDLFSGAGGFTLGLKNA----GIKTIGAIELDRFASETFRKNFPEIPHYQANITEY 56 Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83 +I D++ G PCQ FS AG Sbjct: 57 GDSEIIKLFKGVDIITGGPPCQGFSVAG 84 >gi|317180853|dbj|BAJ58639.1| Type II DNA modification enzyme [Helicobacter pylori F32] Length = 312 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 4/78 (5%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+P Sbjct: 2 DFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTYNFGDLMRINPNDLP 57 Query: 66 DHDVLLAGFPCQPFSQAG 83 D D L++GFPCQ FS G Sbjct: 58 DFDALISGFPCQAFSING 75 >gi|254779148|ref|YP_003057253.1| M. Hpy99XI, type II cytosine specific DNA methyltransferase [Helicobacter pylori B38] gi|254001059|emb|CAX29005.1| M. Hpy99XI, type II cytosine specific DNA methyltransferase [Helicobacter pylori B38] Length = 348 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H + E ++++I+ ++ +YQAN I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFS---VHSHFELIWANDIDKDAILSYQANHKEVQTILCDIVQL 57 Query: 60 KTQDIPDH--DVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPRVSIDILLGGPPCQSYSTLG 83 >gi|200388503|ref|ZP_03215115.1| modification methylase HaeIII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605601|gb|EDZ04146.1| modification methylase HaeIII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 361 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +++ LF G GG+ + + F++++ + KT FP+T + DI++I Sbjct: 12 IRVLSLFSGCGGMDFGITSA----GGDIVFANDVVENACKTLGNYFPDTDIRHSDISQI- 66 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 Q PD D+++ G+PCQ FS AG Sbjct: 67 -QSFPDVDIVVGGYPCQSFSMAG 88 >gi|209528195|ref|ZP_03276665.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209491380|gb|EDZ91765.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 315 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLF G GGI Q S EINP + T+Q NFPN F GD+ Sbjct: 59 YNFIDLFSGAGGITQGFWQA----GFNPVASVEINPIASATHQRNFPNCHHFCGDVNDFN 114 Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83 P +++ G PCQ FS AG Sbjct: 115 PHQWLSKIGSPSVHLVVGGPPCQGFSVAG 143 >gi|188588765|ref|YP_001921868.1| DNA-cytosine methyltransferase [Clostridium botulinum E3 str. Alaska E43] gi|188499046|gb|ACD52182.1| DNA-cytosine methyltransferase [Clostridium botulinum E3 str. Alaska E43] Length = 304 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DLFCG GG L ++ E + + ++K Y NF + + D+ I Sbjct: 1 MKVIDLFCGCGGFSLGMQNA----GFEIVAAYDNWEPAIKVYDENFNHPIYNIDLQNISL 56 Query: 62 QDIP-----DHDVLLAGFPCQPFSQAG 83 ++I + DV++ G PCQ +S AG Sbjct: 57 EEIESMKKLNPDVIIGGPPCQDYSSAG 83 >gi|52841468|ref|YP_095267.1| modification methylase (Eco47II, Sau96I) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628579|gb|AAU27320.1| modification methylase (Eco47II, Sau96I) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 416 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 K+ +LF G GG+ L ++C EI+ V+T + N P+ +I DIA + Sbjct: 81 FKVVELFAGAGGLALGFHNA----GLDCSMLVEIDKNPVETLRHNCPSWNVIHDDIANVD 136 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 Q I DV+ GFPCQ FS AG Sbjct: 137 FQGI-TADVVAGGFPCQAFSYAG 158 >gi|284053792|ref|ZP_06384002.1| cytosine-specific DNA methylase [Arthrospira platensis str. Paraca] gi|291570060|dbj|BAI92332.1| type II DNA modification methyltransferase [Arthrospira platensis NIES-39] Length = 418 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLF G+GGI Q S EINP + T+Q NFPN F GD+ Sbjct: 76 YNFIDLFSGVGGITQGFWQA----GFNPVASVEINPIASATHQRNFPNCHHFCGDVNDFN 131 Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83 P +++ G PCQ FS AG Sbjct: 132 PHQWLSKIGSPSVHLVVGGPPCQGFSVAG 160 >gi|217034658|ref|ZP_03440063.1| hypothetical protein HP9810_901g5 [Helicobacter pylori 98-10] gi|216942866|gb|EEC22357.1| hypothetical protein HP9810_901g5 [Helicobacter pylori 98-10] Length = 312 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 4/78 (5%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+P Sbjct: 2 DFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTYNFGDLMRINPNDLP 57 Query: 66 DHDVLLAGFPCQPFSQAG 83 D D L++GFPCQ FS G Sbjct: 58 DFDALISGFPCQAFSING 75 >gi|124002907|ref|ZP_01687758.1| modification methylase PspPI [Microscilla marina ATCC 23134] gi|123991557|gb|EAY30965.1| modification methylase PspPI [Microscilla marina ATCC 23134] Length = 353 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 ++ LF G+GG L E+ F+ E NP+ + +P+T + DI + Sbjct: 1 MRHASLFSGMGGFDLAAER----MGWVNVFTVENNPFCQTILRHYWPDTTHYEDIRQTNF 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 T D+L GFPCQPFSQAG Sbjct: 57 TPHYGQIDLLTGGFPCQPFSQAG 79 >gi|119512221|ref|ZP_01631310.1| hypothetical protein N9414_08959 [Nodularia spumigena CCY9414] gi|119463119|gb|EAW44067.1| hypothetical protein N9414_08959 [Nodularia spumigena CCY9414] Length = 393 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLFCG GGI L Q S EI+P + T++ NFP F GDI + Sbjct: 60 YTFVDLFCGAGGITQGLSQA----GFTPLASVEISPIASATHKKNFPQCHHFCGDIEQFS 115 Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83 QD P+ +V++ G PCQ FS AG Sbjct: 116 AQDWLQQIGSPEVNVVVGGPPCQGFSVAG 144 >gi|217032692|ref|ZP_03438178.1| hypothetical protein HPB128_202g26 [Helicobacter pylori B128] gi|216945622|gb|EEC24273.1| hypothetical protein HPB128_202g26 [Helicobacter pylori B128] Length = 211 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 4/78 (5%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+P Sbjct: 2 DFCSGIGGGRLGLEQC----HLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLP 57 Query: 66 DHDVLLAGFPCQPFSQAG 83 D D+L++GFPCQ FS G Sbjct: 58 DFDMLVSGFPCQAFSING 75 >gi|126659133|ref|ZP_01730272.1| site-specific DNA-methyltransferase M.NgoVII [Cyanothece sp. CCY0110] gi|126619540|gb|EAZ90270.1| site-specific DNA-methyltransferase M.NgoVII [Cyanothece sp. CCY0110] Length = 346 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 4/68 (5%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAG 73 + L + ++++I+ + +TY+ N N ++ DIA I +DIP D+++ G Sbjct: 1 MDLGFVNA----GYKIIWANDIDSDACQTYKNNIGNHIVKSDIANINLKDIPKCDIIIGG 56 Query: 74 FPCQPFSQ 81 FPCQ FS Sbjct: 57 FPCQDFSL 64 >gi|170698721|ref|ZP_02889786.1| DNA-cytosine methyltransferase [Burkholderia ambifaria IOP40-10] gi|170136346|gb|EDT04609.1| DNA-cytosine methyltransferase [Burkholderia ambifaria IOP40-10] Length = 353 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54 K+ F G GG+ L F++R E + EI+ TY+ N Sbjct: 32 FKVVSFFAGCGGLDLGFTGGFSYRGERFAKLPFEIERAYEIDARCKATYEQNIGPHFETC 91 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D++ + +P+ DVL+ GFPCQ FS G Sbjct: 92 DLSTADIESMPNADVLIGGFPCQEFSICG 120 >gi|111220172|ref|YP_710966.1| putative DNA modification methylase [Frankia alni ACN14a] gi|111147704|emb|CAJ59362.1| putative DNA Modification methylase (Cytosine-specific methyltransferase) [Frankia alni ACN14a] Length = 401 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 I DLFCG GG+ L Q + + + S+ T++ANFP + DI + Sbjct: 56 TIIDLFCGAGGMSLGFVQA----GFSPILAIDHDQPSIDTHRANFPGDSLCVDIRDV--S 109 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 D P DV++ G PCQ FS+ G Sbjct: 110 DFPAADVVIGGPPCQGFSRLG 130 >gi|79835472|gb|ABB52097.1| Mod [Arthrospira platensis] Length = 321 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLF G+GGI Q S EINP + T+Q NFPN F GD+ Sbjct: 76 YNFIDLFSGVGGITQGFWQA----GFNPVASVEINPIASATHQRNFPNCHHFCGDVNDFN 131 Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83 P +++ G PCQ FS AG Sbjct: 132 PHQWLSKIGSPSVHLVVGGPPCQGFSVAG 160 >gi|317009105|gb|ADU79685.1| type II DNA modification [Helicobacter pylori India7] Length = 348 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFS---THPYFELIWANDIDKDAILSYQANHKEAQTILCDIAQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83 >gi|309379756|emb|CBX21532.1| putative DNA cytosine methyltransferase M.NlaII [Neisseria lactamica Y92-1009] Length = 419 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 11/90 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-- 54 +K+ +LF G+GG R+ LE E ++++ P + + Y +FPN+ Sbjct: 1 MKVLELFAGVGGFRIGLENANKDL-FETKWANQWEPSRKSQDAFEVYDYHFPNSENINIS 59 Query: 55 --DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI K ++ D D+++ GFPCQ +S A Sbjct: 60 IADITNEKFSEM-DADMIVGGFPCQDYSVA 88 >gi|84497092|ref|ZP_00995914.1| cytosine-specific DNA methylase [Janibacter sp. HTCC2649] gi|84381980|gb|EAP97862.1| cytosine-specific DNA methylase [Janibacter sp. HTCC2649] Length = 499 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 15/93 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFG 54 DLF GIGG +H C + SEI+ + +TY N+ + ++ Sbjct: 35 FTYVDLFAGIGGFH----AMLDHAGGRCVYVSEIDREARQTYVRNWVDPLPTAQQPIVNT 90 Query: 55 DIAKIKTQD----IPDHDVLLAGFPCQPFSQAG 83 DI D +P+HDVL AGFPCQPFS++G Sbjct: 91 DITIATPDDAPVDVPNHDVLAAGFPCQPFSKSG 123 >gi|322511205|gb|ADX06517.1| putative C-5 cytosine specific DNA methyltransferase [Organic Lake phycodnavirus] Length = 384 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ DLF G G L + T V F +++ +S Y NF + L D+ ++K Sbjct: 72 LKMIDLFAGTGAFTLAFQLT---NAVNVVFGNDMVEHSKNIYDNNFNHKLTLKDLNEVKN 128 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +DIP HD+L GFPCQPFS AG Sbjct: 129 EDIPSHDILTGGFPCQPFSIAG 150 >gi|310657624|ref|YP_003935345.1| cytosine-specific methyltransferase [Clostridium sticklandii DSM 519] gi|308824402|emb|CBH20440.1| Cytosine-specific methyltransferase [Clostridium sticklandii] Length = 326 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 7/85 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNH-------RNVECFFSSEINPYSVKTYQANFPNTLIFGDI 56 + LFCG GG + L F ++E ++++I+ + + ++ NF DI Sbjct: 1 MASLFCGCGGTDVGLLGGFKFLDNSYAKNDMEIVYANDIDINACRIFEENFDIMPDNRDI 60 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQ 81 ++ + ++P+ D+L GFPCQ FS Sbjct: 61 REVASNELPEFDILTGGFPCQSFSI 85 >gi|326204903|ref|ZP_08194756.1| DNA-cytosine methyltransferase [Clostridium papyrosolvens DSM 2782] gi|325984952|gb|EGD45795.1| DNA-cytosine methyltransferase [Clostridium papyrosolvens DSM 2782] Length = 569 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF GIGG + + ++SEI + + + FP L GDI K+K Sbjct: 5 ITVGSLFDGIGGFPM----AGIRQGFIPVWASEIEAFPIAVTKLRFPQMLHVGDITKLKG 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + +P DV+ G PCQ S AG Sbjct: 61 ETLPQVDVVCGGSPCQDLSVAG 82 >gi|159030022|emb|CAO90403.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 412 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + +LF G GG+ L LE ++ EIN V T + N P +I DI KIK Sbjct: 69 YTVIELFAGCGGMALGLENA----GLKTQLLVEINQDCVNTLRLNRPQWNVINQDIKKIK 124 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 D D D++ GFPCQPFS AG Sbjct: 125 FSDFRDKIDIVAGGFPCQPFSYAG 148 >gi|294794108|ref|ZP_06759245.1| DNA (cytosine-5-)-methyltransferase [Veillonella sp. 3_1_44] gi|294455678|gb|EFG24050.1| DNA (cytosine-5-)-methyltransferase [Veillonella sp. 3_1_44] Length = 527 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 11/90 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDI 56 MLK DLF G GG+ L E T + ++EIN + TY+ N P + DI Sbjct: 1 MLKTIDLFAGAGGLSLGFEMTGK---FKVLAAAEINKNAQATYKKNIVEGKPTFTMIEDI 57 Query: 57 AKIKTQDIPD----HDVLLAGFPCQPFSQA 82 ++ + DV++ G PCQ FS A Sbjct: 58 NGYDFMELNEKLGGIDVVIGGPPCQGFSNA 87 >gi|308063322|gb|ADO05209.1| type II DNA modification enzyme (methyltransferase) [Helicobacter pylori Sat464] Length = 348 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQ N I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQVNHKEVQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|291571391|dbj|BAI93663.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39] Length = 390 Score = 100 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 11/88 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 DLF G GG+ LE EC + + +++T+Q N P I GD+ +I T Sbjct: 8 TFIDLFSGAGGMSCGLEMA----GFECLLGVDFDKSAIQTFQNNHPQAETICGDLREIST 63 Query: 62 QDIPD------HDVLLAGFPCQPFSQAG 83 + I + +++ G PCQ FS G Sbjct: 64 EQIRELIGDRHINLICGGPPCQGFSTIG 91 >gi|209523295|ref|ZP_03271851.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209496446|gb|EDZ96745.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 387 Score = 100 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 11/88 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 DLF G GG+ LE EC + + +++T+Q N P I GD+ +I T Sbjct: 9 TFIDLFSGAGGMSCGLEMA----GFECLLGVDFDKSAIQTFQNNHPQAETICGDLREIST 64 Query: 62 QDIPD------HDVLLAGFPCQPFSQAG 83 + I + +++ G PCQ FS G Sbjct: 65 EQIRELIGDRHINLICGGPPCQGFSTIG 92 >gi|79835459|gb|ABB52089.1| Mod [Arthrospira platensis] Length = 390 Score = 100 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 11/88 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 DLF G GG+ LE EC + + +++T+Q N P I GD+ +I T Sbjct: 8 TFIDLFSGAGGMSCGLEMA----GFECLLGVDFDKSAIQTFQNNHPQAETICGDLREIST 63 Query: 62 QDIPD------HDVLLAGFPCQPFSQAG 83 + I + +++ G PCQ FS G Sbjct: 64 EQIRELIGDRHINLICGGPPCQGFSTIG 91 >gi|303285300|ref|XP_003061940.1| predicted protein [Micromonas pusilla CCMP1545] gi|226456351|gb|EEH53652.1| predicted protein [Micromonas pusilla CCMP1545] Length = 341 Score = 100 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFG 54 ++LF G+GG + L F+SE+ P++ +TY AN P LI G Sbjct: 1 FTFSELFAGVGGFGIALRSLGGS----VVFASEMCPHARRTYAANNVVEIGDAPPALIVG 56 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI + IP HD+L GFPCQ FSQ G Sbjct: 57 DITDVCEDIIPPHDILTGGFPCQSFSQRG 85 >gi|120402107|ref|YP_951936.1| DNA-cytosine methyltransferase [Mycobacterium vanbaalenii PYR-1] gi|119954925|gb|ABM11930.1| DNA-cytosine methyltransferase [Mycobacterium vanbaalenii PYR-1] Length = 386 Score = 100 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 4/76 (5%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 LF G GG+ L E + R + ++ + +P++V+TYQ N ++ GD+ ++ Sbjct: 18 VSLFAGCGGMDLGAEAS---RAAKVVWAIDSDPWAVQTYQRNIGKHIVEGDVTTTPVPEV 74 Query: 65 PDHDVLLAGFPCQPFS 80 P DVLLAG PCQ +S Sbjct: 75 P-CDVLLAGPPCQDYS 89 >gi|261837889|gb|ACX97655.1| type II m5C methylase [Helicobacter pylori 51] Length = 348 Score = 100 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDNDAILSYQANHKETQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 DCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|159037548|ref|YP_001536801.1| C-5 cytosine-specific DNA methylase [Salinispora arenicola CNS-205] gi|157916383|gb|ABV97810.1| C-5 cytosine-specific DNA methylase [Salinispora arenicola CNS-205] Length = 98 Score = 100 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 8/84 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----I 59 + DLF GIGG+ L L++ + EINPY ++P D+ Sbjct: 8 VLDLFAGIGGLSLGLQRA----GMRIVGHVEINPYCRAVLARHWPEVSCHDDVRTAAAWW 63 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D P DV+ G+PCQP S AG Sbjct: 64 RSTDRPRVDVVAGGYPCQPESLAG 87 >gi|210135280|ref|YP_002301719.1| type II R-M system methyltransferase [Helicobacter pylori P12] gi|210133248|gb|ACJ08239.1| type II R-M system methyltransferase [Helicobacter pylori P12] Length = 315 Score = 100 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 4/78 (5%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 D GIGG RL LE+ +++C +EIN +++TY+ F +T FGD+ +I D+P Sbjct: 2 DFCSGIGGGRLGLERC----HLKCVGHAEINHEALRTYELFFKDTYNFGDLMRINPNDLP 57 Query: 66 DHDVLLAGFPCQPFSQAG 83 D D L++GFPCQ FS G Sbjct: 58 DFDALISGFPCQAFSING 75 >gi|89892790|ref|YP_516277.1| hypothetical protein DSY0044 [Desulfitobacterium hafniense Y51] gi|89332238|dbj|BAE81833.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 721 Score = 100 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF GIGG L + + ++SEI + ++ + FP L GDI K+ Sbjct: 1 MTMGSLFDGIGGFPLAAVR----NGIAPVWASEIEAFPIEVTKIRFPEMLHVGDITKLNG 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +P DV+ G PCQ S AG Sbjct: 57 AKLPPVDVICGGSPCQDLSVAG 78 >gi|161789274|ref|YP_001595753.1| methyl transferase [Vibrio sp. 09022] gi|161761495|gb|ABX77139.1| methyl transferase [Vibrio sp. 09022] Length = 421 Score = 100 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K F G G+ L LE E + EI+ +T + N P + GDI Sbjct: 1 MKYLSFFSGALGLDLGLESA----GFEPLLACEIDKDCKETIKTNKPELPVIGDIRDYTA 56 Query: 62 QDIP---------DHDVLLAGFPCQPFSQAG 83 Q I + D+++ G PCQ FS AG Sbjct: 57 QQIREIAGLTQDEEVDLVVGGPPCQAFSTAG 87 >gi|127487|sp|P09795|MTS1_SALIN RecName: Full=Modification methylase SinI; Short=M.SinI; AltName: Full=Cytosine-specific methyltransferase SinI gi|79032|pir||A32008 site-specific DNA-methyltransferase (cytosine-specific) (EC 2.1.1.73) - Salmonella sp gi|154350|gb|AAA27212.1| modification methylase (M.SinI) [Salmonella enterica subsp. enterica serovar Infantis] Length = 461 Score = 100 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 13/90 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K F G G+ L +EQ E +SEI+ + T +N PN + GDI T+ Sbjct: 76 KALSFFSGAMGLDLGIEQA----GFETLLASEIDKAARDTILSNRPNMALIGDIRDYTTE 131 Query: 63 DI---------PDHDVLLAGFPCQPFSQAG 83 DI + D+++ G PCQ FS AG Sbjct: 132 DILKLAGVSSGNEIDLIMGGPPCQAFSTAG 161 >gi|269121452|ref|YP_003309629.1| DNA-cytosine methyltransferase [Sebaldella termitidis ATCC 33386] gi|268615330|gb|ACZ09698.1| DNA-cytosine methyltransferase [Sebaldella termitidis ATCC 33386] Length = 372 Score = 100 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 +K+ +LF GIG R LE+ H + SEI+ +++ +Y+A + T GDI KI Sbjct: 1 MKVIELFAGIGSPRKALEKLNIHH--KVIAFSEIDRFAIDSYRAIHNDFLTPNLGDIEKI 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K ++P+ D+L+ G PCQ S AG Sbjct: 59 K--ELPETDLLIYGSPCQDISIAG 80 >gi|166363188|ref|YP_001655461.1| cytosine-specific DNA methylase [Microcystis aeruginosa NIES-843] gi|166085561|dbj|BAG00269.1| cytosine-specific DNA methylase [Microcystis aeruginosa NIES-843] Length = 387 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLF G GGI L Q S+EI+P + T+Q NFPN F GDI Sbjct: 59 YNFIDLFSGAGGITQGLLQA----GFNPVASAEISPIASATHQKNFPNCHHFCGDIHDFN 114 Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83 TQ+ P +++ G PCQ FS AG Sbjct: 115 TQEWLAKIGNPFIHLVVGGPPCQGFSVAG 143 >gi|313891845|ref|ZP_07825450.1| putative modification methylase HhaI [Dialister microaerophilus UPII 345-E] gi|313119839|gb|EFR43026.1| putative modification methylase HhaI [Dialister microaerophilus UPII 345-E] Length = 394 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKIKT 61 DLF GIGG LE+ ++C E + ++ K+Y+A + ++ DI K + Sbjct: 7 FIDLFSGIGGFHSGLEK----VGMKCVGWCEKDKFAQKSYRALYDTERLWFADDIRKCRG 62 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +P+ + GFPCQ S AG Sbjct: 63 WGMPNATLWSFGFPCQDISIAG 84 >gi|317055417|ref|YP_004103884.1| DNA-cytosine methyltransferase [Ruminococcus albus 7] gi|315447686|gb|ADU21250.1| DNA-cytosine methyltransferase [Ruminococcus albus 7] Length = 543 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K+ DLF G GG+ L QT + E + E NP KTY+ N P + GD+ Sbjct: 4 YKVVDLFAGAGGLSLGFVQT---KKYEIKVAFENNPNMQKTYRRNHPKVDVRGDVCAADY 60 Query: 62 QDIPD----HDVLLAGFPCQPFSQA 82 +I DV++ G PCQ FS A Sbjct: 61 SEIKRKYGTIDVVIGGPPCQGFSNA 85 >gi|284051619|ref|ZP_06381829.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] Length = 443 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDI 56 DLF GIGG R+ LE + +C SEI P S++ YQ NF + GD+ Sbjct: 15 FTFVDLFSGIGGFRIALE----NWGGQCLGYSEIEPNSIQVYQHNFIRYANRDEPNLGDM 70 Query: 57 AKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 + P D++ G PCQP+S AG Sbjct: 71 RSL--HKFPFTVDLITGGVPCQPWSIAG 96 >gi|79835495|gb|ABB52098.1| Mod [Arthrospira platensis] Length = 412 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDI 56 DLF GIGG R+ LE + +C SEI P S++ YQ NF + GD+ Sbjct: 15 FTFVDLFSGIGGFRIALE----NWGGQCLGYSEIEPNSIQVYQHNFIRYANRDEPNLGDM 70 Query: 57 AKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 + P D++ G PCQP+S AG Sbjct: 71 RSL--HKFPFTVDLITGGVPCQPWSIAG 96 >gi|313667095|gb|ADR72992.1| M2.BspMI [Bacillus sp. M(2010)] Length = 353 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 11/90 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 ML DLF G GG+ L L++ + S EIN + +T++ NFP +F GDI + Sbjct: 1 MLTAVDLFSGAGGLLLALKEA----GYQTLLSCEINESACETHKYNFPEIPLFQGDIQNL 56 Query: 60 KTQDI------PDHDVLLAGFPCQPFSQAG 83 I D D+++ G PCQ +S G Sbjct: 57 TEDKIIEYTKGTDVDLVVGGPPCQGYSMFG 86 >gi|291570812|dbj|BAI93084.1| cytosine-specific DNA methyltransferase [Arthrospira platensis NIES-39] Length = 443 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDI 56 DLF GIGG R+ LE + +C SEI P S++ YQ NF + GD+ Sbjct: 15 FTFVDLFSGIGGFRIALE----NWGGQCLGYSEIEPNSIQVYQHNFIRYANRDEPNLGDM 70 Query: 57 AKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 + P D++ G PCQP+S AG Sbjct: 71 RSL--HKFPFTVDLITGGVPCQPWSIAG 96 >gi|134097718|ref|YP_001103379.1| C-5 cytosine-specific DNA methylase [Saccharopolyspora erythraea NRRL 2338] gi|291006322|ref|ZP_06564295.1| C-5 cytosine-specific DNA methylase [Saccharopolyspora erythraea NRRL 2338] gi|133910341|emb|CAM00454.1| C-5 cytosine-specific DNA methylase [Saccharopolyspora erythraea NRRL 2338] Length = 248 Score = 100 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L + LF GIGG+ L LE+ + E++P+ + ++P D+ Sbjct: 4 LTVLSLFAGIGGLELGLERA----GMRVVGQVELDPWCRQVLAHHWPEVPRHDDVRTAVD 59 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 +Q PD +++ GFPCQPFS G Sbjct: 60 WWHSQPRPDVELVAGGFPCQPFSTYG 85 >gi|208434405|ref|YP_002266071.1| type II DNA modification enzyme [Helicobacter pylori G27] gi|208432334|gb|ACI27205.1| type II DNA modification enzyme [Helicobacter pylori G27] Length = 348 Score = 100 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFS---IHPYFELIWANDIDRDAILSYQANHKEAQTILCDIAQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|56964613|ref|YP_176344.1| site-specific DNA-methyltransferase [Bacillus clausii KSM-K16] gi|56910856|dbj|BAD65383.1| site-specific DNA-methyltransferase [Bacillus clausii KSM-K16] Length = 286 Score = 100 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K +LF GIGGI L E +E E P+ K ++P+ IF DI + Sbjct: 1 MKSIELFAGIGGIALAAEWA----GIETVAFCEREPFCQKILNKHWPDVPIFDDIKTLDK 56 Query: 62 QDIPD--HDV-----LLAGFPCQPFSQAG 83 + + + DV + GFPCQP+S AG Sbjct: 57 KALEERGIDVGAIELITGGFPCQPYSVAG 85 >gi|307637157|gb|ADN79607.1| DNA cytosine methyltransferase [Helicobacter pylori 908] Length = 165 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFS---VHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83 >gi|90592696|ref|YP_529611.1| hypothetical protein CDBPCV119_gp60 [Clostridium phage phi CD119] gi|71482543|gb|AAX53484.1| hypothetical protein [Clostridium phage phi CD119] Length = 260 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 7/76 (9%) Query: 11 IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAKIKTQDIPDH 67 IGG RL +E+ + +C E + ++ +Y A + DI +I+T++IP Sbjct: 18 IGGFRLGMEKAGH----KCLGHCEYDKFANLSYNAMHKPKEDEWFERDIREIRTENIPRA 73 Query: 68 DVLLAGFPCQPFSQAG 83 DV GFPCQ S AG Sbjct: 74 DVWCFGFPCQDISVAG 89 >gi|325972432|ref|YP_004248623.1| DNA-cytosine methyltransferase [Spirochaeta sp. Buddy] gi|324027670|gb|ADY14429.1| DNA-cytosine methyltransferase [Spirochaeta sp. Buddy] Length = 402 Score = 99.8 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-D 55 + +LF G+GG R+ LE + + F+++ P ++ Y +F + D Sbjct: 5 YNVVELFAGVGGFRVGLEASGV---WKVAFANQWEPGKKNQWAFDCYTKHFSEGIHSNAD 61 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 IAK++ +DIPDH +L+ GFPCQ +S A Sbjct: 62 IAKVEAKDIPDHSLLVGGFPCQDYSVA 88 >gi|323512819|gb|ADX88273.1| putative DNA-methyltransferase, type II restriction-modification system (Enterobacteria phage RB16) [Vibrio phage ICP1_2006_D] gi|323513047|gb|ADX88500.1| putative DNA-methyltransferase, type II restriction-modification system (Enterobacteria phage RB16) [Vibrio phage ICP1_2006_C] Length = 332 Score = 99.8 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G+ R+ LE+ +++SEI+ ++K QAN+P+ + GD+ K + Sbjct: 1 MNVLSLFDGMACCRIALERAGIQVG--NYYASEIDKNAIKVAQANWPDNIQLGDVTKWQE 58 Query: 62 Q--DIPDHDVLLAGFPCQPFSQAG 83 D D++ GFPCQ +S AG Sbjct: 59 WGIDWASIDLVTGGFPCQAWSIAG 82 >gi|323487868|ref|ZP_08093126.1| type II modification methyltransferase [Planococcus donghaensis MPA1U2] gi|323398602|gb|EGA91390.1| type II modification methyltransferase [Planococcus donghaensis MPA1U2] Length = 420 Score = 99.8 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-D 55 L++ +LF G+GG RL L++ NH + + ++ P + Y NF + D Sbjct: 7 LRVIELFAGVGGFRLGLQKA-NHELFDIVWGNQWEPSRKAQDAFDCYSRNFDTGIHSNED 65 Query: 56 IAKIKTQDIPD--HDVLLAGFPCQPFSQA 82 I K+ D D+L+ GFPCQ +S A Sbjct: 66 ITKVSDDTFHDLRADLLVGGFPCQDYSVA 94 >gi|154795669|gb|ABS86795.1| putative DNA methylase [Helicobacter cetorum] Length = 381 Score = 99.8 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 15/93 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI- 59 LK+ DLF G+GG E N ++EI+ +Y+ N NT+ I DI Sbjct: 4 LKVLDLFAGVGGFSKGFENA----NFNIVLANEIDKEIAYSYKENHKNTIMIDSDINDFL 59 Query: 60 ---------KTQDIPDHDVLLAGFPCQPFSQAG 83 + D DV++ G PCQ FS AG Sbjct: 60 KHYHNLETKDKEKCKDIDVIIGGSPCQGFSMAG 92 >gi|308184264|ref|YP_003928397.1| type II DNA modification enzyme [Helicobacter pylori SJM180] gi|308060184|gb|ADO02080.1| type II DNA modification enzyme [Helicobacter pylori SJM180] Length = 188 Score = 99.8 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M K+ D+FCG GG+ H + E ++++I+ ++ +YQAN I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFS---VHPHFELIWANDIDKDAILSYQANHKEAQTILCDIAQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|260591850|ref|ZP_05857308.1| type II DNA modification methyltransferase [Prevotella veroralis F0319] gi|260536134|gb|EEX18751.1| type II DNA modification methyltransferase [Prevotella veroralis F0319] Length = 166 Score = 99.8 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + LF G GG+ ++E +P T++ANFP+T LI GDI +K Sbjct: 1 MNLISLFSGAGGLDKGFHNA----GFRTMVANEFDPKICPTFKANFPDTKLIEGDIRNVK 56 Query: 61 TQDIPDHD-VLLAGFPCQPFSQAG 83 + P H ++ G PCQ +S+AG Sbjct: 57 DGEFPKHVAGIIGGPPCQSWSEAG 80 >gi|49476998|ref|YP_035184.1| modification methylase HpaII (cytosine-specific methyltransferase HpaII) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328554|gb|AAT59200.1| modification methylase HpaII (Cytosine-specific methyltransferase HpaII) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 373 Score = 99.8 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K DLF GIGGIR E T E S+EI+ Y+ +TY+ + D+ + Sbjct: 3 YKTLDLFAGIGGIRRGFELTGR---FENVLSAEIDQYACQTYEHLYSENP-KNDVTSAEF 58 Query: 62 QDIPD---HDVLLAGFPCQPFSQAG 83 ++ + +DVLL GFPCQ FS AG Sbjct: 59 KEKVEKLTYDVLLGGFPCQAFSTAG 83 >gi|171911440|ref|ZP_02926910.1| DNA-cytosine methyltransferase [Verrucomicrobium spinosum DSM 4136] Length = 292 Score = 99.8 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 4/78 (5%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 LF GIGG L E+ +C +S EINP + FP++ F D+ + ++ Sbjct: 17 SLFAGIGGFELGFERA----GFQCSWSVEINPINRAVLADRFPHSRQFEDVRECGAHNLS 72 Query: 66 DHDVLLAGFPCQPFSQAG 83 DVL AGFPCQ S AG Sbjct: 73 PVDVLTAGFPCQDISAAG 90 >gi|154502385|ref|ZP_02039445.1| hypothetical protein RUMGNA_00198 [Ruminococcus gnavus ATCC 29149] gi|153797010|gb|EDN79430.1| hypothetical protein RUMGNA_00198 [Ruminococcus gnavus ATCC 29149] Length = 215 Score = 99.8 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 37/110 (33%), Gaps = 32/110 (29%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------------- 47 +K D F G+GG R +E + EC E + ++ +Y + Sbjct: 1 MKFIDFFAGVGGFRRGMELAGH----ECVGFCEFDKFATASYTSMHLLTQEQREFLDKMP 56 Query: 48 --------------PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI ++ DIP D GFPCQ S AG Sbjct: 57 LKQRQKEILKEEYRNGEWYANDIRRVYAGDIPKADCWCFGFPCQDISVAG 106 >gi|325997344|gb|ADZ49552.1| Type II DNA modification enzyme [Helicobacter pylori 2017] Length = 159 Score = 99.8 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFS---VHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83 >gi|312200922|ref|YP_004020983.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c] gi|311232258|gb|ADP85113.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c] Length = 384 Score = 99.4 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + DLFCG GG+ L Q + S + + S++T++ANFP I DI Sbjct: 37 TLIDLFCGAGGMTLGFMQA----GFQPILSIDHDLPSIETHRANFPGMSICTDIR--DFV 90 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 D P DV++ G PCQ FS+ G Sbjct: 91 DFPSADVVVGGPPCQGFSRLG 111 >gi|208289|gb|AAA72678.1| Mtase protein (ttg start codon) [synthetic construct] Length = 474 Score = 99.4 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 L++ LF GIG L + E SEI+ Y++K+Y A TL GDI+K Sbjct: 4 LRVMSLFSGIGAFEAALRNIG--VDYELIGFSEIDKYAIKSYCAIHNVSETLNVGDISKA 61 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K +IP D+L +GFPC FS AG Sbjct: 62 KKDNIPYFDLLTSGFPCPTFSVAG 85 >gi|9630267|ref|NP_046694.1| modification methylase [Bacillus phage SPBc2] gi|16079084|ref|NP_389907.1| SP-beta prophage DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. subtilis str. 168] gi|221309931|ref|ZP_03591778.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis str. 168] gi|221314254|ref|ZP_03596059.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319176|ref|ZP_03600470.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis str. JH642] gi|221323451|ref|ZP_03604745.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis str. SMY] gi|56405062|sp|P68585|MTBP_BACSU RecName: Full=Phi-3T prophage-derived modification methylase Phi3TI; Short=M.Phi3TI; AltName: Full=Cytosine-specific methyltransferase Phi3TI gi|56405063|sp|P68586|MTBP_BPPHT RecName: Full=Modification methylase Phi3TI; Short=M.Phi3TI; AltName: Full=Cytosine-specific methyltransferase Phi3TI gi|7433506|pir||T12906 modification methylase - Bacillus subtilis phage SPBc2 gi|215471|gb|AAA32352.1| methyltransferase (ttg start codon) [Bacillus phage phi3T] gi|2634418|emb|CAB13917.1| putative SP-beta prophage DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. subtilis str. 168] gi|3025620|gb|AAC13115.1| modification methylase [Bacillus phage SPbeta] Length = 443 Score = 99.4 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 L++ LF GIG L + E SEI+ Y++K+Y A TL GDI+K Sbjct: 4 LRVMSLFSGIGAFEAALRNIG--VDYELIGFSEIDKYAIKSYCAIHNVSETLNVGDISKA 61 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K +IP D+L +GFPC FS AG Sbjct: 62 KKDNIPYFDLLTSGFPCPTFSVAG 85 >gi|127440|sp|P24600|MTD1_HERAU RecName: Full=Modification methylase HgiDI; Short=M.HgiDI; AltName: Full=Cytosine-specific methyltransferase HgiDI gi|43482|emb|CAA38938.1| methyltransferase [Herpetosiphon aurantiacus] Length = 309 Score = 99.4 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF G GG+ L Q E + + ++ TYQ NF + + D+A+I Sbjct: 1 MKTIDLFAGCGGMSLGFMQA----GFEIVAAVDNWRPAINTYQQNFTHPIHELDLAQIDA 56 Query: 62 --QDIPDH--DVLLAGFPCQPFSQAG 83 I H ++++ G PCQ FS AG Sbjct: 57 AVSLIKTHSPELIIGGPPCQDFSSAG 82 >gi|296501658|ref|YP_003663358.1| type II restriction-modification system methylation subunit [Bacillus thuringiensis BMB171] gi|296322710|gb|ADH05638.1| Type II restriction-modification system methylation subunit [Bacillus thuringiensis BMB171] Length = 602 Score = 99.4 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 40/97 (41%), Gaps = 19/97 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLI 52 KI DLF G GG+ EQT E + EIN +V+TY N P Sbjct: 23 YKIIDLFAGAGGLSNGFEQTGR---FEIVGAVEINKEAVETYICNHQNNKEIIIKPKNSE 79 Query: 53 FGDIAKIKTQDI-------PDHDVLLAGFPCQPFSQA 82 DI+ I + P V++ G PCQ FS A Sbjct: 80 ISDISSIDFNEFIMQKGIDPSETVVIGGPPCQGFSNA 116 >gi|166365618|ref|YP_001657891.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] gi|166087991|dbj|BAG02699.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] Length = 412 Score = 99.4 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + +LF G GG+ L LE ++ EIN V T + N P +I DI KIK Sbjct: 69 YTVIELFAGCGGMALGLENA----GLKTQLLVEINQDCVNTLRLNRPQWNVINQDIKKIK 124 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 + D D++ GFPCQPFS AG Sbjct: 125 FSNFRDKIDIVAGGFPCQPFSYAG 148 >gi|258652183|ref|YP_003201339.1| DNA-cytosine methyltransferase [Nakamurella multipartita DSM 44233] gi|258555408|gb|ACV78350.1| DNA-cytosine methyltransferase [Nakamurella multipartita DSM 44233] Length = 467 Score = 99.4 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 + DLF G+GG + L + C F++E++P Y N+ + DI Sbjct: 8 FRFVDLFAGLGGFHVALRELGGA----CVFAAELDPTLNALYAENYQLEA-WKDINDLAS 62 Query: 59 --IKTQDIPDHDVLLAGFPCQPFSQAG 83 I +Q++PDHDVL AGFPCQPFS+AG Sbjct: 63 SRIISQEVPDHDVLTAGFPCQPFSKAG 89 >gi|325995748|gb|ADZ51153.1| DNA-cytosine methyltransferase [Helicobacter pylori 2018] Length = 160 Score = 99.4 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T I DIA++ Sbjct: 1 MYKVADIFCGAGGLSYGFS---VHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83 >gi|254410214|ref|ZP_05023994.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196183250|gb|EDX78234.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 392 Score = 99.4 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 6/82 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 +LFCGIGG R+ +Q RN+ ++++ P + + Y+ F L GDI ++ Sbjct: 8 TTVELFCGIGGFRIAADQ----RNIATIWANDRCPKACQVYRDRFGKAQLHQGDIYQL-V 62 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +IP HD+L AGFPCQPFS AG Sbjct: 63 DEIPPHDLLTAGFPCQPFSSAG 84 >gi|307153788|ref|YP_003889172.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306984016|gb|ADN15897.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 424 Score = 99.4 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQD 63 DLF G GG+ L EQ + S EI+P T++ NFP +T+I + +I ++ Sbjct: 12 VDLFAGAGGMSLGFEQA----GFDVLASVEIDPIHCATHEYNFPFSTMICRSVTEITARE 67 Query: 64 IP--------DHDVLLAGFPCQPFSQAG 83 I D DV+ G PCQ FS G Sbjct: 68 IRNLSPIGTQDIDVVFGGPPCQGFSLIG 95 >gi|323650451|gb|ADX97303.1| M.FseI [Frankia sp. Eul1b] Length = 374 Score = 99.4 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + DLFCG GG+ L Q + S + + S++T++ANFP I DI Sbjct: 27 TLIDLFCGAGGMTLGFMQA----GFQPILSIDHDLPSIETHRANFPGMSICTDIR--DFV 80 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 D P DV++ G PCQ FS+ G Sbjct: 81 DFPSADVVVGGPPCQGFSRLG 101 >gi|304372874|ref|YP_003856083.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1] gi|304309065|gb|ADM21545.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1] Length = 413 Score = 99.4 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 17/95 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGD 55 K DLF G GG+ L E S EI P +V+TY NF N + D Sbjct: 92 YKFIDLFSGAGGLSCGLVMA----GFEPIASVEIMPDAVETYVYNFQNRKKKEELIETRD 147 Query: 56 IAKIKTQD-----IPD--HDVLLAGFPCQPFSQAG 83 I +K ++ D D+++ GFPCQ FS AG Sbjct: 148 IRDVKVKEELYNKFKDTDIDLIVGGFPCQGFSMAG 182 >gi|240145320|ref|ZP_04743921.1| DNA (cytosine-5-)-methyltransferase [Roseburia intestinalis L1-82] gi|257202585|gb|EEV00870.1| DNA (cytosine-5-)-methyltransferase [Roseburia intestinalis L1-82] Length = 504 Score = 99.4 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ LF GIGG L ++ + ++SEI + + FP GDI K+ + Sbjct: 4 KLGSLFDGIGGFPLAAKR----NGIRPVWASEIEKFPMAVTMHRFPEMKHMGDITKLHGE 59 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 ++P DV+ G PCQ S AG Sbjct: 60 NLPVVDVIAGGSPCQDLSIAG 80 >gi|326560963|gb|EGE11328.1| type II DNA modification enzyme [Moraxella catarrhalis 7169] gi|326575187|gb|EGE25115.1| type II DNA modification enzyme [Moraxella catarrhalis CO72] Length = 322 Score = 99.4 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 43/78 (55%), Gaps = 4/78 (5%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 D GIG RL LE + C SEI+ S TYQ F + GD+ ++ + D+P Sbjct: 2 DFCSGIGAGRLGLENA----GMCCVAHSEIDLNSDLTYQLFFNDYSNLGDLTQLNSDDLP 57 Query: 66 DHDVLLAGFPCQPFSQAG 83 D DV+LAGFPCQ FS G Sbjct: 58 DFDVMLAGFPCQTFSIVG 75 >gi|307699864|ref|ZP_07636915.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris FB024-16] gi|307614902|gb|EFN94120.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris FB024-16] Length = 439 Score = 99.4 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 24/105 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHR----------NVECFFSSEINP-------YSVKTYQ 44 +++ +LF G+GG RL LE N ++++ P ++ + YQ Sbjct: 9 IRVAELFAGVGGFRLGLEGWAGDATAPGTLPSAGNFTTIWANQWEPPGTLPRQFAARCYQ 68 Query: 45 ANFP-NTLIFGDIAKIKTQ------DIPDHDVLLAGFPCQPFSQA 82 ++F N++I DIA++ +IPD D+++ GFPCQ +S A Sbjct: 69 SHFGENSVINRDIARVMDDAEAGQIEIPDVDLVVGGFPCQDYSVA 113 >gi|291521423|emb|CBK79716.1| DNA-methyltransferase (dcm) [Coprococcus catus GD/7] Length = 521 Score = 99.4 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 36/92 (39%), Gaps = 16/92 (17%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 MLK DLF G GG+ E T ++E N + KTY N DI I Sbjct: 1 MLKTIDLFAGAGGLSYGFESTGE---FLIVAAAENNKNARKTYIENHKG---RNDIRLIP 54 Query: 61 ----------TQDIPDHDVLLAGFPCQPFSQA 82 + DV++ G PCQ FS A Sbjct: 55 DVRDYDFSALASEFDGIDVVIGGPPCQGFSNA 86 >gi|258514764|ref|YP_003190986.1| DNA-cytosine methyltransferase [Desulfotomaculum acetoxidans DSM 771] gi|257778469|gb|ACV62363.1| DNA-cytosine methyltransferase [Desulfotomaculum acetoxidans DSM 771] Length = 703 Score = 99.1 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF GIGG L + ++SEI P+ ++ + FP L GDI K+K Sbjct: 5 LSLGSLFDGIGGFPL----AGVRQGFASVWASEIEPFPIEVTKIRFPEMLHVGDITKLKG 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ DV+ G PCQ S AG Sbjct: 61 AELAPVDVVCGGSPCQDLSVAG 82 >gi|254673893|emb|CBA09676.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha275] Length = 326 Score = 99.1 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L DLF G GG+ L EQ + S E+ +TY+ NFP+ L+ D+ + Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLT 60 Query: 61 TQDIPDH------DVLLAGFPCQPFSQAG 83 QD+ + D+++ G PCQ FS AG Sbjct: 61 EQDLINCLNGQAVDLIIGGPPCQGFSMAG 89 >gi|207092664|ref|ZP_03240451.1| type II DNA modification enzyme [Helicobacter pylori HPKX_438_AG0C1] gi|207108938|ref|ZP_03243100.1| type II DNA modification enzyme [Helicobacter pylori HPKX_438_CA4C1] Length = 160 Score = 99.1 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ D+FCG GG+ H + E ++++I+ ++ +YQAN +I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFS---THPHFELIWANDIDKDAILSYQANHKEVQIILCDIVQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPCVSIDILLGGPPCQSYSTLG 83 >gi|269964614|ref|ZP_06178852.1| hypothetical protein VMC_02820 [Vibrio alginolyticus 40B] gi|269830513|gb|EEZ84734.1| hypothetical protein VMC_02820 [Vibrio alginolyticus 40B] Length = 556 Score = 99.1 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +LF G GG L LE+ +EC ++ +P + T + N PN L+ G+I+ + Sbjct: 4 FTFVELFAGCGGTALGLEKA----GMECVLLNDSDPRACDTLRTNRPNWNLVEGNISNVD 59 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 I H D+L FP QPFS AG Sbjct: 60 FSTISTHVDLLSGSFPVQPFSLAG 83 >gi|300118609|ref|ZP_07056347.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus SJ1] gi|298723998|gb|EFI64702.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus SJ1] Length = 602 Score = 99.1 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 39/97 (40%), Gaps = 19/97 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLI 52 KI DLF G GG+ EQT E + EIN +V TY N P Sbjct: 23 YKIIDLFAGAGGLSNGFEQTGR---FEIVGAVEINKEAVATYICNHQNNKDIIIKPKNSE 79 Query: 53 FGDIAKIKTQDI-------PDHDVLLAGFPCQPFSQA 82 DI+ I + P V++ G PCQ FS A Sbjct: 80 ISDISSIDFNEFITQKGIDPSETVVIGGPPCQGFSNA 116 >gi|187934831|ref|YP_001884812.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum B str. Eklund 17B] gi|187722984|gb|ACD24205.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum B str. Eklund 17B] Length = 424 Score = 99.1 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 12/91 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFP-----NTL 51 I +LF G+GG R+ E++ + + ++++ P ++ + Y+++F N Sbjct: 3 YTICELFAGVGGFRVGFEKS--SSDWKTVWANQWEPSKKVQHAFECYRSHFETSGGINEF 60 Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI+++ + IP H VL+ GFPCQ +S A Sbjct: 61 SNIDISQVPEEHIPGHTVLVGGFPCQDYSVA 91 >gi|295100151|emb|CBK89240.1| DNA-methyltransferase (dcm) [Eubacterium cylindroides T2-87] Length = 405 Score = 99.1 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 14/92 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG--- 54 I +LF G+GG RL E+ + + S+ P ++ + Y +F ++ Sbjct: 4 TICELFAGVGGFRLGFERA--DSGWKTTWFSQWEPGARTQWANQCYVQHFGDSPDINGEF 61 Query: 55 ----DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI+ + IPDH +L+ GFPCQ +S A Sbjct: 62 HTCEDISTVDKNAIPDHTLLVGGFPCQDYSVA 93 >gi|217033040|ref|ZP_03438509.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128] gi|298736593|ref|YP_003729119.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] gi|216945239|gb|EEC23921.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128] gi|298355783|emb|CBI66655.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] Length = 351 Score = 99.1 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M K+ D+FCG GG+ + H E ++++I+ ++ +YQAN I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSK---HPYFELIWANDIDKDAILSYQANHKEAQTILCDIVQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P ++LL G PCQ +S G Sbjct: 58 HCHNLPCVSINILLGGPPCQSYSTLG 83 >gi|332704951|ref|ZP_08425037.1| DNA-methyltransferase (dcm) [Lyngbya majuscula 3L] gi|332356303|gb|EGJ35757.1| DNA-methyltransferase (dcm) [Lyngbya majuscula 3L] Length = 360 Score = 99.1 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQD 63 DLF G GG+ L + + EI+ +V TY+ NFP+T +I D+ I Sbjct: 8 IDLFAGAGGLSLGFHMA----GWQITTAIEIDKSAVSTYRENFPSTNVIRSDVRAIDFTQ 63 Query: 64 IPDHDVLLAGFPCQPFSQ 81 D+++ PCQPFS Sbjct: 64 FQGIDLVVGSPPCQPFSV 81 >gi|18976421|ref|NP_577778.1| cytosine-specific DNA-methyltransferase [Pyrococcus furiosus DSM 3638] gi|18891953|gb|AAL80173.1| site-specific DNA-methyltransferase (cytosine-specific) [Pyrococcus furiosus DSM 3638] Length = 301 Score = 99.1 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 M + DLF G GG L + + + E KTY NFP ++ DI + Sbjct: 1 MPSVIDLFAGAGGFSLGFKLA----GFKIISAVENFKPKAKTYSFNFPEVKVYVSDIKAL 56 Query: 60 KTQDIPDHDVLLAGFPCQPFS 80 +D P DV++ G PC+PF+ Sbjct: 57 NPKDFPKADVIIGGPPCEPFT 77 >gi|323487872|ref|ZP_08093130.1| cytosine-specific methyltransferase [Planococcus donghaensis MPA1U2] gi|323398606|gb|EGA91394.1| cytosine-specific methyltransferase [Planococcus donghaensis MPA1U2] Length = 367 Score = 99.1 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI 59 + K LF G GG+ + + + +++EI+ + TY+ N P T++ GD+ Sbjct: 4 IYKGISLFTGAGGMDVGFKSA----GIHVEWANEIDKDACNTYETNNPETILAKGDLRNY 59 Query: 60 --KTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D D++ G PCQ FS AG Sbjct: 60 IETLKEHRDIDIVFGGPPCQGFSVAG 85 >gi|218441171|ref|YP_002379500.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] gi|218173899|gb|ACK72632.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] Length = 415 Score = 99.1 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 DLF G GG+ L EQ + + EINP TY+ NFP T+I +A I+ ++ Sbjct: 13 VDLFAGAGGMSLGFEQA----GFDVLAAVEINPIHCATYEYNFPFWTIICRSVADIRGEE 68 Query: 64 IP--------DHDVLLAGFPCQPFSQAG 83 I + DV+ G PCQ FS G Sbjct: 69 IRQLSALKNQEIDVVFGGPPCQGFSLMG 96 >gi|270157659|ref|ZP_06186316.1| DNA-cytosine methyltransferase family protein [Legionella longbeachae D-4968] gi|269989684|gb|EEZ95938.1| DNA-cytosine methyltransferase family protein [Legionella longbeachae D-4968] Length = 414 Score = 98.7 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 K+ +LF G GG+ L + C EI+ + V+T + N P+ +I DIA + Sbjct: 81 FKVVELFAGAGGLALGFHNA----GLNCELLVEIDKFPVETLRKNCPSWNVICDDIANVN 136 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + + D++ GFPCQ FS AG Sbjct: 137 FRGV-KADIVAGGFPCQAFSYAG 158 >gi|218895988|ref|YP_002444399.1| cytosine-specific methyltransferase NlaX [Bacillus cereus G9842] gi|218540614|gb|ACK93008.1| cytosine-specific methyltransferase NlaX [Bacillus cereus G9842] Length = 348 Score = 98.7 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 43/95 (45%), Gaps = 12/95 (12%) Query: 1 MLKITDLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIA 57 +LK DLF GIGG R L + + E EI Y F +I D+ Sbjct: 2 ILKYLDLFAGIGGFRQALINSSLKNVKFEPIGYCEIEKKCQLVYNEIFGTDGEVIVDDVK 61 Query: 58 KIKTQD---------IPDHDVLLAGFPCQPFSQAG 83 KI + D +P+ D+LL GFPCQPFS G Sbjct: 62 KIFSPDMVNVDGSKKLPEFDLLLGGFPCQPFSNVG 96 >gi|312142618|ref|YP_003994064.1| DNA-cytosine methyltransferase [Halanaerobium sp. 'sapolanicus'] gi|311903269|gb|ADQ13710.1| DNA-cytosine methyltransferase [Halanaerobium sp. 'sapolanicus'] Length = 406 Score = 98.7 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 12/90 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG--- 54 + +LF G+GG RL LE++ + + ++ P ++ + Y NF Sbjct: 4 TVCELFAGVGGFRLGLEKSSEE--WKTVWMNQWEPTRKSQWAYECYIENFGKDKAINLFS 61 Query: 55 --DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI+++ T IPDH++L+ GFPCQ +S A Sbjct: 62 NTDISEVDTSVIPDHNLLVGGFPCQDYSVA 91 >gi|229183237|ref|ZP_04310467.1| Site-specific DNA-methyltransferase [Bacillus cereus BGSC 6E1] gi|228600376|gb|EEK57966.1| Site-specific DNA-methyltransferase [Bacillus cereus BGSC 6E1] Length = 592 Score = 98.7 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 40/97 (41%), Gaps = 19/97 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLI 52 KI DLF G GG+ EQT E + EIN +V+TY N P Sbjct: 13 YKIIDLFAGAGGLSNGFEQTGR---FEIVGAVEINKEAVETYICNHQNNKEIIIKPKNSE 69 Query: 53 FGDIAKIKTQDI-------PDHDVLLAGFPCQPFSQA 82 DI+ I + P V++ G PCQ FS A Sbjct: 70 ISDISSINFHEFMMQKGIDPSETVVIGGPPCQGFSNA 106 >gi|266620546|ref|ZP_06113481.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM 13479] gi|288867840|gb|EFD00139.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM 13479] Length = 521 Score = 98.7 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 36/92 (39%), Gaps = 16/92 (17%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 MLK DLF G GG+ E T ++E N + KTY N DI I Sbjct: 1 MLKTIDLFAGAGGLSYGFESTGE---FLIVAAAENNKNARKTYIENHKG---RNDIRMIP 54 Query: 61 ----------TQDIPDHDVLLAGFPCQPFSQA 82 + DV++ G PCQ FS A Sbjct: 55 DVRGYDFSALASEFDGIDVVIGGPPCQGFSNA 86 >gi|1098476|gb|AAC37047.1| orf; homologous to Haemophilus parahaemolyticus hphIM(C) Accession Number M24625 [Neisseria meningitidis] Length = 276 Score = 98.7 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L DLF G GG+ L EQ + S E+ +TY+ NFP+ L+ D+ + Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLT 60 Query: 61 TQDIPDH------DVLLAGFPCQPFSQAG 83 QD+ + D+++ G PCQ FS AG Sbjct: 61 EQDLINCLNGQAVDLIIGGPPCQGFSMAG 89 >gi|303237411|ref|ZP_07323977.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] gi|302482361|gb|EFL45390.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] Length = 383 Score = 98.7 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +LF G GG+ L E+ H +E+N + +T ++N PN ++ DI + Sbjct: 44 FTSIELFAGAGGLALGFEKAGFHH----VMLNELNREACETLRSNRPNWNVLEADIHNVD 99 Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83 D+L GFPCQ FS AG Sbjct: 100 FSKWHNQIDLLTGGFPCQAFSYAG 123 >gi|41019146|sp|P09389|MTBB_BPSPB RecName: Full=Modification methylase SPBetaI; Short=M.SPBetaI; AltName: Full=Cytosine-specific methyltransferase SPBetaI Length = 257 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 L++ LF GIG L + E SEI+ Y++K+Y A TL GDI+K Sbjct: 4 LRVMSLFSGIGAFEAALRNIG--VDYELIGFSEIDKYAIKSYCAIHNVSETLNVGDISKA 61 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K +IP D+L +GFPC FS AG Sbjct: 62 KKDNIPYFDLLTSGFPCPTFSVAG 85 >gi|229056682|ref|ZP_04196086.1| Site-specific DNA-methyltransferase [Bacillus cereus AH603] gi|228720618|gb|EEL72179.1| Site-specific DNA-methyltransferase [Bacillus cereus AH603] Length = 602 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 40/97 (41%), Gaps = 19/97 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLI 52 KI DLF G GG+ EQT E + EIN +V+TY N P Sbjct: 23 YKIIDLFAGAGGLSNGFEQTGK---FEIVGAVEINKEAVETYICNHQNNKEIIIKPKNSE 79 Query: 53 FGDIAKIKTQDI-------PDHDVLLAGFPCQPFSQA 82 DI+ I Q P V++ G PCQ FS A Sbjct: 80 ISDISSINFQKFMMQKGIDPSETVVIGGPPCQGFSNA 116 >gi|229585366|ref|YP_002843868.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.27] gi|228020416|gb|ACP55823.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.27] Length = 325 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 +K+ DLF G GG L ++ +E + +IN + +TY NFPNT+ I DI +I Sbjct: 4 IKVIDLFSGAGGFSLGFKK----LGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQIS 59 Query: 61 TQDI-----PDHDVLLAGFPCQPFSQA 82 ++I + DV++ G PC+ ++ A Sbjct: 60 GKEILKNVGDEIDVIIGGPPCEGYTAA 86 >gi|229579730|ref|YP_002838129.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.G.57.14] gi|228010445|gb|ACP46207.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.G.57.14] Length = 325 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 +K+ DLF G GG L ++ +E + +IN + +TY NFPNT+ I DI +I Sbjct: 4 IKVIDLFSGAGGFSLGFKK----LGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQIS 59 Query: 61 TQDI-----PDHDVLLAGFPCQPFSQA 82 ++I + DV++ G PC+ ++ A Sbjct: 60 GKEILKNVGDEIDVIIGGPPCEGYTAA 86 >gi|304388871|ref|ZP_07370921.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|302028149|gb|ADK90963.1| unknown [Neisseria meningitidis] gi|304337164|gb|EFM03348.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|316985914|gb|EFV64853.1| modification methylase HphIA [Neisseria meningitidis H44/76] gi|325143322|gb|EGC65656.1| cytosine-specificmethyltransferase HphIA [Neisseria meningitidis 961-5945] Length = 276 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L DLF G GG+ L EQ + S E+ +TY+ NFP+ L+ D+ + Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLT 60 Query: 61 TQDIPDH------DVLLAGFPCQPFSQAG 83 QD+ + D+++ G PCQ FS AG Sbjct: 61 EQDLINCLNGQAVDLIIGGPPCQGFSMAG 89 >gi|227828127|ref|YP_002829907.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.14.25] gi|227830834|ref|YP_002832614.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.S.2.15] gi|229581602|ref|YP_002840001.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.N.15.51] gi|238620327|ref|YP_002915153.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.4] gi|284998349|ref|YP_003420117.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.D.8.5] gi|227457282|gb|ACP35969.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.S.2.15] gi|227459923|gb|ACP38609.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.14.25] gi|228012318|gb|ACP48079.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.N.15.51] gi|238381397|gb|ACR42485.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.4] gi|284446245|gb|ADB87747.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.D.8.5] Length = 325 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 +K+ DLF G GG L ++ +E + +IN + +TY NFPNT+ I DI +I Sbjct: 4 IKVIDLFSGAGGFSLGFKK----LGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQIS 59 Query: 61 TQDI-----PDHDVLLAGFPCQPFSQA 82 ++I + DV++ G PC+ ++ A Sbjct: 60 GKEILKNVGDEIDVIIGGPPCEGYTAA 86 >gi|157953702|ref|YP_001498593.1| hypothetical protein AR158_C512R [Paramecium bursaria Chlorella virus AR158] gi|156068350|gb|ABU44057.1| hypothetical protein AR158_C512R [Paramecium bursaria Chlorella virus AR158] Length = 352 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 12/91 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-----D 55 ++K LF G GG L ++ +E E + ++ T++ NF G D Sbjct: 4 IMKAISLFAGAGGDSLGMKMA----GIEVVAFLENDTDAIYTHKRNFDKCHHIGSSVGGD 59 Query: 56 IAKIKTQDIP---DHDVLLAGFPCQPFSQAG 83 I KI ++ D D++ AGFPCQ FS AG Sbjct: 60 ITKIPDEEFKKYGDVDIIFAGFPCQGFSNAG 90 >gi|304390602|ref|ZP_07372555.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326358|gb|EFL93603.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 321 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ DLF G GG+ L EQ + + + +V Y+ NF + + D+A + Sbjct: 25 MRVIDLFSGCGGMSLGFEQG----GYQVVAAFDNWQPAVDIYKENFQHPIHNIDLATDEA 80 Query: 62 QDI---PDHDVLLAGFPCQPFSQAG 83 +I DV++ G PCQ +S AG Sbjct: 81 LEIIEQAKPDVIIGGPPCQDYSIAG 105 >gi|283782595|ref|YP_003373349.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05] gi|283441341|gb|ADB13807.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05] Length = 424 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 24/105 (22%) Query: 2 LKITDLFCGIGGIRLDLEQ----------TFNHRNVECFFSSEINP-------YSVKTYQ 44 +K+ +LF G+GG RL LE + ++++ P ++ + Y+ Sbjct: 5 IKVAELFAGVGGFRLGLEGYTPSEENNFTAEPAGPFKTVWANQWEPAGQESKQFAWRCYE 64 Query: 45 ANFP-NTLIFGDIAKIKTQ------DIPDHDVLLAGFPCQPFSQA 82 F + + DIA++ + DIP+ D+L+ GFPCQ +S A Sbjct: 65 KRFGKGSCVNEDIAEVLKKFEHGECDIPNFDMLVGGFPCQDYSVA 109 >gi|15894780|ref|NP_348129.1| DNA-methyltransferase (cytosine-specific), ortholog of BSP6I Bsubtilis [Clostridium acetobutylicum ATCC 824] gi|15024448|gb|AAK79469.1|AE007660_12 DNA-methyltransferase (cytosine-specific), ortholog of BSP6I Bsubtilis [Clostridium acetobutylicum ATCC 824] gi|325508918|gb|ADZ20554.1| DNA-methyltransferase (cytosine-specific) [Clostridium acetobutylicum EA 2018] Length = 415 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 34/130 (26%), Positives = 47/130 (36%), Gaps = 48/130 (36%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI- 59 + LF G+GGI L + + +++EI+ Y+ +TY+ NF + LI GDI KI Sbjct: 6 FTVGSLFAGVGGICLGFKTAEYRGLGYNLIWANEIDEYAGETYRHNFDHNLIAGDIEKIV 65 Query: 60 ---------------------KTQDIP-------------------------DHDVLLAG 73 + I DVL G Sbjct: 66 DLNIIQSEQNRYINIMNEVATDEERIKYKVLIEKCEEEKQIYREKQKQILSSKIDVLNGG 125 Query: 74 FPCQPFSQAG 83 FPCQ FS AG Sbjct: 126 FPCQAFSIAG 135 >gi|291561285|emb|CBL40084.1| DNA-methyltransferase (dcm) [butyrate-producing bacterium SS3/4] Length = 247 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 9/88 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQ--ANFPNTLIFGDI 56 M++ LF GIG E+ ++ E E++ Y+ K Y + P ++ GDI Sbjct: 1 MIRYLSLFSGIG----AFEKALDNLGIPYELLAYCEVDKYASKAYSLLHHVPESMNLGDI 56 Query: 57 AKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 K+ + +P D D+L GFPCQ S AG Sbjct: 57 TKVDEKALPTDIDLLTYGFPCQDISIAG 84 >gi|210134686|ref|YP_002301125.1| type II R-M system methyltransferase [Helicobacter pylori P12] gi|210132654|gb|ACJ07645.1| type II R-M system methyltransferase [Helicobacter pylori P12] Length = 160 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M K+ D+FCG GG+ + H + E ++++I+ ++ +YQAN I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFSK---HPHFELIWANDIDKDAILSYQANHKEAQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83 >gi|323475189|gb|ADX85795.1| DNA-cytosine methyltransferase [Sulfolobus islandicus REY15A] gi|323477921|gb|ADX83159.1| DNA-cytosine methyltransferase [Sulfolobus islandicus HVE10/4] Length = 325 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 +K+ DLF G GG L ++ +E + +IN + +TY NFPNT+ I DI +I Sbjct: 4 IKVIDLFSGAGGFSLGFKK----LGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQIS 59 Query: 61 TQDI-----PDHDVLLAGFPCQPFSQA 82 ++I + DV++ G PC+ ++ A Sbjct: 60 GKEILKNVGDEIDVIIGGPPCEGYTAA 86 >gi|307155289|ref|YP_003890673.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306985517|gb|ADN17398.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 387 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLF G GGI Q ++ S EINP + TY NFP F GDIA+ Sbjct: 70 YTFVDLFAGAGGITQGFVQA----GLKPIASLEINPIASATYVKNFPQCHHFCGDIAEFL 125 Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83 + P+ +++ G PCQ FS AG Sbjct: 126 PINWLNQIGSPEIHLVVGGPPCQGFSVAG 154 >gi|325069077|ref|ZP_08127750.1| cytosine-specific DNA modification methyltransferase [Actinomyces oris K20] Length = 448 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 TDLF GIGG L +C ++ EI+ + + Y+ N+ GDI + Sbjct: 5 FTYTDLFAGIGGFHAALS----GMGGQCTYAVEIDKDAARIYEQNWG-VGALGDIT-VDA 58 Query: 62 QD------IPDHDVLLAGFPCQPFSQAG 83 + I HD+L AGFPCQPFS++G Sbjct: 59 GEHGVSERIQPHDILAAGFPCQPFSKSG 86 >gi|157952870|ref|YP_001497762.1| hypothetical protein NY2A_B566R [Paramecium bursaria Chlorella virus NY2A] gi|155123097|gb|ABT14965.1| hypothetical protein NY2A_B566R [Paramecium bursaria Chlorella virus NY2A] Length = 349 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-----DI 56 +K LF G GG L ++ +E E + ++ T++ NF G DI Sbjct: 19 MKAISLFAGAGGDSLGMKMA----GIEVVAFLENDTDAIYTHKRNFDKCHHIGSSVGGDI 74 Query: 57 AKIKTQDIP---DHDVLLAGFPCQPFSQAG 83 KI ++ D D++ AGFPCQ FS AG Sbjct: 75 TKIPDEEFKKYGDVDIIFAGFPCQGFSNAG 104 >gi|291336805|gb|ADD96340.1| DNA cytosine 5 methyltransferase [uncultured organism MedDCM-OCT-S08-C700] Length = 287 Score = 98.3 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ D F GIGG E+ E E +PY K ++PN I DI + Sbjct: 4 LRLLDTFSGIGGFSYAAEKLVG--GYETTQFVENDPYCQKVLNKHWPNVPIHDDIETYRA 61 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++ DV+ GFPCQ S AG Sbjct: 62 -ELYSADVICGGFPCQDISAAG 82 >gi|319956919|ref|YP_004168182.1| DNA-cytosine methyltransferase [Nitratifractor salsuginis DSM 16511] gi|319419323|gb|ADV46433.1| DNA-cytosine methyltransferase [Nitratifractor salsuginis DSM 16511] Length = 394 Score = 97.9 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 3/83 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF GIG + F E FS EI+ ++ K+Y A + ++ D+ + Sbjct: 1 MKIATLFSGIGAPEMAARHIFPSH--EIVFSCEIDKFARKSYAAIYGEEPLYHDVHNVPA 58 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 H D+L+ G PCQ FS AG Sbjct: 59 IFYQGHIDLLVGGSPCQSFSVAG 81 >gi|315650298|ref|ZP_07903370.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315487409|gb|EFU77719.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 644 Score = 97.9 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G GG L ++SEI P+ + FP L GDI K+ Sbjct: 16 MKLGALFSGSGGFEL----AGQLVGFTPVWASEIEPFPILVTTKRFPRMLHLGDIKKLDG 71 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +P D++ G PCQ S AG Sbjct: 72 AKMPKVDIITGGSPCQDMSIAG 93 >gi|8489198|gb|AAF75616.1|AF216814_7 5-methylcytosine methyltransferase [Lactococcus lactis subsp. lactis bv. diacetylactis] gi|3702801|gb|AAC77904.1| LlaKR2I methylase enzyme [Lactococcus lactis] Length = 420 Score = 97.9 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFGDI 56 +K+ +LF G+GG R+ LE + + +S++ P + + Y +FPN+ Sbjct: 1 MKVLELFAGVGGFRIGLENADKNL-FKTKWSNQWEPSRKSQDAFEVYDYHFPNSENI--- 56 Query: 57 AKIKTQDIP-------DHDVLLAGFPCQPFSQA 82 I DIP D D+++ GFPCQ +S A Sbjct: 57 -NISISDIPDEKFAEMDADIIVGGFPCQDYSVA 88 >gi|300863842|ref|ZP_07108767.1| Cytosine-specific methyltransferase (fragment) [Oscillatoria sp. PCC 6506] gi|300338190|emb|CBN53913.1| Cytosine-specific methyltransferase (fragment) [Oscillatoria sp. PCC 6506] Length = 237 Score = 97.9 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 32/89 (35%), Positives = 39/89 (43%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLFCG GG+ L Q + S E NP + T+Q NFP F GDI Sbjct: 60 YTFVDLFCGAGGMTQGLVQA----GFQPVASVEANPIASATHQKNFPKCHHFCGDIKSFS 115 Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83 Q P +++ G PCQ FS AG Sbjct: 116 PQQWLSQINSPKVHLVVGGPPCQGFSVAG 144 >gi|325133150|gb|EGC55821.1| modification methylase HphIA [Neisseria meningitidis M6190] gi|325138766|gb|EGC61318.1| modification methylase HphIA [Neisseria meningitidis ES14902] gi|325197365|gb|ADY92821.1| modification methylase HphIA [Neisseria meningitidis G2136] gi|325203202|gb|ADY98655.1| modification methylase HphIA [Neisseria meningitidis M01-240355] Length = 332 Score = 97.9 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L DLF G GG+ L EQ + S E+ +TY+ NFP+ L+ D+ + Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLT 60 Query: 61 TQDIPDH------DVLLAGFPCQPFSQAG 83 QD+ + D+++ G PCQ FS AG Sbjct: 61 EQDLINCLNGQAVDLIIGGPPCQGFSMAG 89 >gi|20094956|ref|NP_614803.1| site-specific DNA methylase [Methanopyrus kandleri AV19] gi|19888204|gb|AAM02733.1| Site-specific DNA methylase [Methanopyrus kandleri AV19] Length = 315 Score = 97.9 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 K+ DLFCG GG ++ + E NP TY+ NFP +I DI ++ + Sbjct: 4 KVVDLFCGAGGFSRGFKEA----GFKILGGVENNPAPAATYRENFPEAEVIERDIQRVDS 59 Query: 62 QDIPDH----DVLLAGFPCQPFSQA 82 ++I D DV++ G PC+PF+ A Sbjct: 60 EEIVDELGEPDVIIGGPPCEPFTAA 84 >gi|225375653|ref|ZP_03752874.1| hypothetical protein ROSEINA2194_01278 [Roseburia inulinivorans DSM 16841] gi|225212510|gb|EEG94864.1| hypothetical protein ROSEINA2194_01278 [Roseburia inulinivorans DSM 16841] Length = 473 Score = 97.9 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ LF GIGG L ++ + ++SEI + + FP GDI K+ + Sbjct: 4 KLGSLFDGIGGFPLAAKR----NGIRPVWASEIEKFPMAVTMYRFPEMKHMGDITKLHGE 59 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 ++P DV+ G PCQ S AG Sbjct: 60 NLPVVDVIAGGSPCQDLSIAG 80 >gi|205360554|ref|ZP_02684441.2| modification methylase DdeI [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205348823|gb|EDZ35454.1| modification methylase DdeI [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 394 Score = 97.9 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 11/87 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61 K+ D F G GG L E + E++ ++ +T++ N P +L I DI++ Sbjct: 5 KVLDTFAGAGGFSLGFHMA----GAEIIGAIEVDSWATETFKFNHPESLVIKKDISQFSD 60 Query: 62 QDI------PDHDVLLAGFPCQPFSQA 82 ++I D++L G PCQ FS A Sbjct: 61 EEILETFKNNKPDIILGGPPCQGFSIA 87 >gi|295104578|emb|CBL02122.1| DNA-methyltransferase (dcm) [Faecalibacterium prausnitzii SL3/3] Length = 293 Score = 97.9 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 3/74 (4%) Query: 11 IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP-DHDV 69 IGG L + ++ + +++EINP + KTY+ NF N ++ GDI++ K IP D+ Sbjct: 6 IGGFDF-LGKHYSKTGFKIIWANEINPAACKTYRDNFGNYIVEGDISE-KINTIPASADI 63 Query: 70 LLAGFPCQPFSQAG 83 ++ GFPCQ S G Sbjct: 64 VVGGFPCQDISING 77 >gi|291537886|emb|CBL10997.1| DNA-methyltransferase (dcm) [Roseburia intestinalis XB6B4] Length = 473 Score = 97.9 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ LF GIGG L ++ + ++SEI + + FP GDI K+ + Sbjct: 4 KLGSLFDGIGGFPLAAKR----NGIRPVWASEIEKFPMAVTMYRFPEMKHMGDITKLHGE 59 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 ++P DV+ G PCQ S AG Sbjct: 60 NLPVVDVIAGGSPCQDLSIAG 80 >gi|226324849|ref|ZP_03800367.1| hypothetical protein COPCOM_02636 [Coprococcus comes ATCC 27758] gi|225207297|gb|EEG89651.1| hypothetical protein COPCOM_02636 [Coprococcus comes ATCC 27758] Length = 473 Score = 97.5 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 36/109 (33%), Gaps = 32/109 (29%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--------------- 47 K D F GIGG R +E + EC E + ++ +Y + Sbjct: 4 KFIDWFAGIGGFRRGMELAGH----ECVGFCEFDKFATASYISMHLLTDEQRKKLNELPQ 59 Query: 48 -------------PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D+ ++ DIP D GFPCQ S AG Sbjct: 60 KKRQKEILKDEYRNGEWYANDVRRVCADDIPKADCWCFGFPCQDISVAG 108 >gi|240142445|ref|YP_002966955.1| putative site-specific DNA-methyltransferase [Methylobacterium extorquens AM1] gi|240012389|gb|ACS43614.1| putative site-specific DNA-methyltransferase [Methylobacterium extorquens AM1] Length = 335 Score = 97.5 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 8/87 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + DLF GIGGI L LE+ E + + ++P+ I D+ + Sbjct: 8 LTVLDLFSGIGGISLGLERAGP---FRTIAFCEALEARRRILRRHWPDVPIHDDVRTLDG 64 Query: 62 QDI-----PDHDVLLAGFPCQPFSQAG 83 + DV+ GFPCQ S AG Sbjct: 65 RSFGAGSSRSVDVICGGFPCQDISLAG 91 >gi|310819714|ref|YP_003952072.1| cytosine-specific methyltransferase [Stigmatella aurantiaca DW4/3-1] gi|309392786|gb|ADO70245.1| Cytosine-specific methyltransferase [Stigmatella aurantiaca DW4/3-1] Length = 421 Score = 97.5 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 13/90 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 K+ LF G GG+ E E + E++ +T + N P+ T++ DI K++ Sbjct: 5 KVISLFSGAGGLDYGFEAA----GFETAVALEMDHACCETLRENRPSWTVMETDILKVRG 60 Query: 62 QD--------IPDHDVLLAGFPCQPFSQAG 83 +D I + DVL+ G PCQPFS+AG Sbjct: 61 KDVLKAAGLKIGEADVLIGGPPCQPFSKAG 90 >gi|240142441|ref|YP_002966951.1| Site-specific DNA-methyltransferase [Methylobacterium extorquens AM1] gi|240012385|gb|ACS43610.1| Site-specific DNA-methyltransferase [Methylobacterium extorquens AM1] Length = 463 Score = 97.5 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 10/86 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLF G GG L + S EI+P + T+ ANFP + F D + Sbjct: 13 VLDLFSGCGGFSLGFQAA----GFRIAGSVEIDPSARATHAANFPEAVHFDDATTADPAE 68 Query: 64 I------PDHDVLLAGFPCQPFSQAG 83 + VL+ G PCQ +++ G Sbjct: 69 VGACLAGAPFTVLVGGPPCQAYARVG 94 >gi|294788934|ref|ZP_06754174.1| modification methylase HphIA [Simonsiella muelleri ATCC 29453] gi|294483036|gb|EFG30723.1| modification methylase HphIA [Simonsiella muelleri ATCC 29453] Length = 328 Score = 97.5 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L DLF G GG L ++ S E+ +TY+ NFP + D+ + Sbjct: 3 LTYIDLFSGAGGFSLGFDRA----GFRQLLSVELEKTYCETYRTNFPKHHVLQTDLTTLS 58 Query: 61 TQDIPD------HDVLLAGFPCQPFSQAG 83 + I + DV++ G PCQ FS AG Sbjct: 59 NEKILNELNGQAVDVVIGGPPCQGFSMAG 87 >gi|108562885|ref|YP_627201.1| type II DNA modification enzyme [Helicobacter pylori HPAG1] gi|107836658|gb|ABF84527.1| type II DNA modification enzyme [Helicobacter pylori HPAG1] Length = 160 Score = 97.5 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M K+ D+FCG GG+ H E ++++I+ ++ +YQAN I DI ++ Sbjct: 1 MYKVADIFCGAGGLSYGFS---THPYFELIWANDIDKDAILSYQANHKEAQTILCDIMQL 57 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++P D+LL G PCQ +S G Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83 >gi|170077805|ref|YP_001734443.1| Type II cytosine-5 DNA methyltransferase [Synechococcus sp. PCC 7002] gi|462645|sp|P34882|MTAA_SYNP2 RecName: Full=Modification methylase AquI subunit alpha; Short=M.AquI subunit alpha; Short=M.AquiA; AltName: Full=Cytosine-specific methyltransferase AquI subunit alpha gi|2126509|pir||I39659 modification methylase AquI, alpha protein - Synechococcus sp. (PCC 7002) gi|142180|gb|AAA22067.1| M.AquI alpha protein [Synechococcus sp. PCC 7002] gi|169885474|gb|ACA99187.1| DNA-cytosine methyltransferase [Synechococcus sp. PCC 7002] Length = 248 Score = 97.5 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 13/90 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61 K+ LF G GG+ + + E +P T + N P+T I GDI I T Sbjct: 4 KLISLFSGAGGMDIGFHAA----GFSTAVAVEQDPSCCNTLRLNMPDTPVIEGDITSITT 59 Query: 62 QDIPDH--------DVLLAGFPCQPFSQAG 83 Q I + D+++ G PCQ FS AG Sbjct: 60 QVILEAAKVNPLEIDLVIGGPPCQSFSLAG 89 >gi|197303495|ref|ZP_03168534.1| hypothetical protein RUMLAC_02217 [Ruminococcus lactaris ATCC 29176] gi|197297493|gb|EDY32054.1| hypothetical protein RUMLAC_02217 [Ruminococcus lactaris ATCC 29176] Length = 496 Score = 97.5 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 13/89 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + K DL GIGGIR E T E S+EI+PY+ TY+ F + Sbjct: 2 IYKTIDLCAGIGGIRRGFEMTGL---FENVLSAEIDPYAALTYKHLFGEDPTN----DLT 54 Query: 61 TQDIP------DHDVLLAGFPCQPFSQAG 83 ++D ++DVLLAGFPCQ FS+ G Sbjct: 55 SEDFKNEVVNTEYDVLLAGFPCQAFSRVG 83 >gi|167746072|ref|ZP_02418199.1| hypothetical protein ANACAC_00767 [Anaerostipes caccae DSM 14662] gi|167654587|gb|EDR98716.1| hypothetical protein ANACAC_00767 [Anaerostipes caccae DSM 14662] Length = 476 Score = 97.5 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 13/88 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL----IFGDIAKI 59 + DLFCG GG+ L Q +++I P V TY N P+T I GDI + Sbjct: 108 MIDLFCGAGGLSLGFTQ----NGFITSLANDIEPCCVDTYAHNHPDTPRENIILGDINNV 163 Query: 60 -----KTQDIPDHDVLLAGFPCQPFSQA 82 + Q DV++ G PCQ FS A Sbjct: 164 IENITELQRFSSVDVVVGGPPCQGFSMA 191 >gi|89097277|ref|ZP_01170167.1| hypothetical protein B14911_16900 [Bacillus sp. NRRL B-14911] gi|89088100|gb|EAR67211.1| hypothetical protein B14911_16900 [Bacillus sp. NRRL B-14911] Length = 416 Score = 97.5 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-D 55 L + +LF G+GG R+ LE+ + + ++++ P + Y ++FP+++ D Sbjct: 5 LNVVELFAGVGGFRVGLERADKNF-FDTVWANQWEPSKKAQDAFNCYNSHFPSSVNCNDD 63 Query: 56 IAKIKTQDIPD--HDVLLAGFPCQPFSQA 82 I K+ + D D+L+ GFPCQ +S A Sbjct: 64 IGKVSNKTFEDMNIDLLVGGFPCQDYSVA 92 >gi|2894386|emb|CAA74996.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase (C1) [Bacillus pumilus] Length = 398 Score = 97.1 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 15/91 (16%) Query: 2 LKI-------TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIF 53 +K DLF G GG+ L E E + EI+ ++V TY+ N N +I Sbjct: 1 MKFPNKKVSPIDLFAGAGGMSLGFENA----GFEIPLAVEIDDWAVDTYRKNRENSNVIK 56 Query: 54 GDIAKIK---TQDIPDHDVLLAGFPCQPFSQ 81 DI +I + D ++ G PCQ FS Sbjct: 57 NDILEIDNAFFKQFSGIDAVIGGPPCQGFSI 87 >gi|240114016|ref|ZP_04728506.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae MS11] Length = 333 Score = 97.1 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 L DLF G GG+ L EQ + S E+ +TY+ NFP + L+ D+ + Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPRHQLLQKDLTTLT 60 Query: 61 TQDIPDH------DVLLAGFPCQPFSQAG 83 QD+ + D+++ G PCQ FS AG Sbjct: 61 EQDLTNCLNGQSVDLVIGGPPCQGFSMAG 89 >gi|77918034|ref|YP_355849.1| C-5 cytosine-specific DNA methylase [Pelobacter carbinolicus DSM 2380] gi|77544117|gb|ABA87679.1| C-5 cytosine-specific DNA methylase [Pelobacter carbinolicus DSM 2380] Length = 405 Score = 97.1 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 13/91 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 MLK L+ G GG+ L LE E + EI+ ++ +T N PN I DI + Sbjct: 1 MLKTISLYTGAGGLDLGLEAA----GFETTVAVEIDKWACQTLCHNRPNWNPIEEDIHNV 56 Query: 60 KTQDIP--------DHDVLLAGFPCQPFSQA 82 + + +L+ G PCQPFS+A Sbjct: 57 SCATLSEIGGFNSGEASLLIGGPPCQPFSKA 87 >gi|332710136|ref|ZP_08430089.1| DNA-methyltransferase [Lyngbya majuscula 3L] gi|332351094|gb|EGJ30681.1| DNA-methyltransferase [Lyngbya majuscula 3L] Length = 370 Score = 97.1 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L T LF G GG+ + E + +S++I+ +SVKT + N P + DI ++ Sbjct: 3 LSFTSLFSGAGGLDIGFEMA----GFQHLYSTDIDTWSVKTLRNNRPEWDVEEADIRELS 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +D+PD DV+LAG PCQ FS G Sbjct: 59 ERDLPDSDVILAGVPCQGFSLGG 81 >gi|59802210|ref|YP_208922.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA 1090] gi|239997871|ref|ZP_04717795.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02] gi|240015148|ref|ZP_04722061.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI18] gi|240017596|ref|ZP_04724136.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA6140] gi|240081740|ref|ZP_04726283.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19] gi|240116752|ref|ZP_04730814.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae PID18] gi|240118973|ref|ZP_04733035.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae PID1] gi|240122219|ref|ZP_04735181.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae PID24-1] gi|240124509|ref|ZP_04737465.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae PID332] gi|240124618|ref|ZP_04737504.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae SK-92-679] gi|240129189|ref|ZP_04741850.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|260439487|ref|ZP_05793303.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2] gi|268593717|ref|ZP_06127884.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02] gi|268597838|ref|ZP_06132005.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19] gi|268683185|ref|ZP_06150047.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae SK-92-679] gi|291042721|ref|ZP_06568462.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2] gi|293398253|ref|ZP_06642458.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|2330911|gb|AAC45838.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae] gi|59719105|gb|AAW90510.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA 1090] gi|268547106|gb|EEZ42524.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02] gi|268551626|gb|EEZ46645.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19] gi|268623469|gb|EEZ55869.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae SK-92-679] gi|291013155|gb|EFE05121.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2] gi|291611516|gb|EFF40586.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|317165321|gb|ADV08862.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae TCDC-NG08107] Length = 333 Score = 97.1 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 L DLF G GG+ L EQ + S E+ +TY+ NFP + L+ D+ + Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPRHQLLQKDLTTLT 60 Query: 61 TQDIPDH------DVLLAGFPCQPFSQAG 83 QD+ + D+++ G PCQ FS AG Sbjct: 61 EQDLTNCLNGQSVDLVIGGPPCQGFSMAG 89 >gi|119513855|ref|ZP_01632813.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia spumigena CCY9414] gi|119461493|gb|EAW42572.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia spumigena CCY9414] Length = 318 Score = 97.1 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 13/88 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 KI DLF G GG+ + E + +I+ ++ TY+ N+PNT +I DI ++ Sbjct: 4 KIIDLFAGAGGLTTGFDM----EGFESLCAIDIDAKALATYKHNYPNTKIIHQDIRQVNP 59 Query: 62 QDIP--------DHDVLLAGFPCQPFSQ 81 D+ + VL+ G PCQ FS+ Sbjct: 60 SDLRLALGLRQEELTVLIGGPPCQGFSR 87 >gi|294673411|ref|YP_003574027.1| C-5 cytosine-specific family DNA methylase [Prevotella ruminicola 23] gi|294473101|gb|ADE82490.1| DNA methylase, C-5 cytosine-specific family [Prevotella ruminicola 23] Length = 448 Score = 97.1 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DLFCG GG+ L ++ + + ++ Y ANF + +I D++ + Sbjct: 1 MKVVDLFCGCGGLSLGFQKA----GFNILAAFDNWDDAITVYHANFKHPVIKQDLSNVD- 55 Query: 62 QDIPDH-----DVLLAGFPCQPFSQAG 83 Q + D+++ G PCQ FS AG Sbjct: 56 QTVEKVKKYKPDMIIGGPPCQDFSSAG 82 >gi|15897209|ref|NP_341814.1| DNA modification methylase, type II R/M system [Sulfolobus solfataricus P2] gi|284174455|ref|ZP_06388424.1| DNA modification methylase, type II R/M system [Sulfolobus solfataricus 98/2] gi|13813404|gb|AAK40604.1| DNA modification methylase, type II R/M system [Sulfolobus solfataricus P2] gi|261601877|gb|ACX91480.1| DNA-cytosine methyltransferase [Sulfolobus solfataricus 98/2] Length = 325 Score = 97.1 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 10/88 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 ++KI DLF G GG L ++ +E + +IN + +TY NFPNT+ I DI +I Sbjct: 3 LIKIIDLFSGAGGFSLGFKK----LGIEPKLAIDINHAATRTYSLNFPNTIVIEDDIREI 58 Query: 60 KTQDI-----PDHDVLLAGFPCQPFSQA 82 +I D DV++ G PC+ ++ A Sbjct: 59 SGGEILKNVGNDIDVVIGGPPCEGYTAA 86 >gi|283457186|ref|YP_003361755.1| site-specific DNA methylase [Rothia mucilaginosa DY-18] gi|283133170|dbj|BAI63935.1| site-specific DNA methylase [Rothia mucilaginosa DY-18] Length = 439 Score = 97.1 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 24/103 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--------VECFFSSEINP-------YSVKTYQAN 46 +++ +LF G+GG RL E +N ++++ P ++ + YQ Sbjct: 12 IRVIELFAGVGGFRLGFE-GYNANGMTLPSAGPFTTVWANQWEPPGTVGRQFAARCYQER 70 Query: 47 FPNT--LIFGDIAKIKTQ------DIPDHDVLLAGFPCQPFSQ 81 F L DI + +IPD D+L GFPCQ +S Sbjct: 71 FGEEANLENRDIHAVLDDVEAGLYEIPDADLLCGGFPCQDYSV 113 >gi|167758237|ref|ZP_02430364.1| hypothetical protein CLOSCI_00575 [Clostridium scindens ATCC 35704] gi|167664134|gb|EDS08264.1| hypothetical protein CLOSCI_00575 [Clostridium scindens ATCC 35704] Length = 418 Score = 97.1 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GI ++ LE+ +E + + EI+ Y++K + N P+ + GD+ K Sbjct: 21 MKVLSLFDGISCGKVALERAG--IQIEEYVAFEIDKYAIKISKKNHPDIIQRGDVTKADF 78 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS AG Sbjct: 79 SEFEGFDIVIGGSPCQGFSFAG 100 >gi|319779704|ref|YP_004130617.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9] gi|317109728|gb|ADU92474.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9] Length = 339 Score = 96.8 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +DLF G+GG R+ E +C FS E N ++ +TY NF L + DI I Sbjct: 12 FTFSDLFAGMGGFRVAFES----LGAKCVFSCENNTFAKETYWINF-KELTYDDIYTIPM 66 Query: 62 QDIPDHDVLLAGFPCQPFSQ 81 +PDHD++ AGFP + S Sbjct: 67 DIVPDHDIMCAGFPPETISL 86 >gi|221232587|ref|YP_002511741.1| DNA modification methylase [Streptococcus pneumoniae ATCC 700669] gi|220675049|emb|CAR69627.1| putative DNA modification methylase [Streptococcus pneumoniae ATCC 700669] Length = 421 Score = 96.8 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 11/90 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-- 54 +K+ +LF G+GG R+ LE + ++++ P + + Y +FPN+ Sbjct: 1 MKVLELFAGVGGFRIGLENADKQL-FKTKWANQWEPSRKSQDAFEVYDYHFPNSKNINIS 59 Query: 55 --DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI + + D D+++ GFPCQ +S A Sbjct: 60 ISDITDEQFSKM-DADMIVGGFPCQDYSVA 88 >gi|325270791|ref|ZP_08137382.1| modification methylase Eco47II [Prevotella multiformis DSM 16608] gi|324986907|gb|EGC18899.1| modification methylase Eco47II [Prevotella multiformis DSM 16608] Length = 437 Score = 96.8 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +LF G GG+ L + + +EI P + +T + N P+ ++ DI ++ Sbjct: 73 FTSVELFAGCGGLALGIHKA----GFRHVLLNEIEPVACRTLRRNRPDWNVLNEDIHRVD 128 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 + D+L GFPCQ FS AG Sbjct: 129 FSPLSGKVDLLTGGFPCQAFSYAG 152 >gi|325678040|ref|ZP_08157677.1| putative modification methylase BspRI [Ruminococcus albus 8] gi|324110257|gb|EGC04436.1| putative modification methylase BspRI [Ruminococcus albus 8] Length = 358 Score = 96.8 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 + + DLFCG GG + + +I ++ TY NFPN + I DI+ +K Sbjct: 1 MNVFDLFCGCGGFSKGFQSA----GFDIKLGIDIWQDAITTYNHNFPNAVTITEDISNLK 56 Query: 61 TQDI--------PDHDVLLAGFPCQPFSQAG 83 +D+ + DV++ G PCQ FS +G Sbjct: 57 GEDLLSRANLTADEVDVIIGGPPCQGFSLSG 87 >gi|254883949|ref|ZP_05256659.1| site-specific DNA methylase [Bacteroides sp. 4_3_47FAA] gi|254836742|gb|EET17051.1| site-specific DNA methylase [Bacteroides sp. 4_3_47FAA] Length = 420 Score = 96.8 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G+ ++ L++ E +++SEI+ ++++ Q NFP+T+ GD+ ++ Sbjct: 1 MKVLSLFDGMSCGQIALKRLGIRT--ETYYASEIDRHAIRQTQLNFPDTIQLGDVTQVDV 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + + D+L+ G PCQ FS AG Sbjct: 59 RQLEPIDLLIGGSPCQSFSFAG 80 >gi|119489697|ref|ZP_01622456.1| putative 5-methylcytosine methyltransferase [Lyngbya sp. PCC 8106] gi|119454434|gb|EAW35583.1| putative 5-methylcytosine methyltransferase [Lyngbya sp. PCC 8106] Length = 384 Score = 96.8 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 12/91 (13%) Query: 1 MLK-ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK 58 M K DLF G GG+ LEQ EC + + S++T+QAN + +I GD+ + Sbjct: 1 MAKMFIDLFSGAGGMSCGLEQA----GFECILGIDQDKASLETFQANHHHANIICGDLRE 56 Query: 59 IKTQDIPD------HDVLLAGFPCQPFSQAG 83 I +DI + D++ G PCQ FS G Sbjct: 57 ITLEDIYEQIDNQTVDLICGGPPCQGFSTIG 87 >gi|172038386|ref|YP_001804887.1| site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] gi|171699840|gb|ACB52821.1| probable site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] Length = 461 Score = 96.8 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 F G G+ + +EQ + + EI+ Y +T N PN + GDI DI Sbjct: 74 ISFFSGAMGLDIGIEQA----GFDIKLACEIDKYCRQTIALNKPNIALVGDINSCSADDI 129 Query: 65 ---------PDHDVLLAGFPCQPFSQAG 83 D D+++ G PCQ FS AG Sbjct: 130 LSYAGLTRSDDIDLIVGGPPCQAFSTAG 157 >gi|4033737|gb|AAC97190.1| modification methylase M.NspI [Nostoc sp. PCC 7524] Length = 397 Score = 96.8 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLFCG GGI L Q + S EI+P + T+Q NFP+ F GDI + Sbjct: 60 YTFVDLFCGAGGITQGLVQA----GFQALASVEISPIASATHQRNFPHCHHFWGDIEQFY 115 Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83 + P+ ++++ G PCQ FS AG Sbjct: 116 PKSWLQQIGYPEVNLVVGGPPCQGFSVAG 144 >gi|310657622|ref|YP_003935343.1| cytosine-specific methyltransferase [Clostridium sticklandii DSM 519] gi|308824400|emb|CBH20438.1| Cytosine-specific methyltransferase [Clostridium sticklandii] Length = 344 Score = 96.4 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + + DLFCG GG+ EQ + + +++T++ N N I GDI +I Sbjct: 1 MNLIDLFCGCGGLSYGFEQA----GFNVLLGIDNDKAALETFKLNHKNSKTICGDIREIT 56 Query: 61 TQDIPDH------DVLLAGFPCQPFSQAG 83 +I + D+++ G PCQ S +G Sbjct: 57 FDEINNVIGNKKIDLIVGGPPCQGMSLSG 85 >gi|228969793|ref|ZP_04130554.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar sotto str. T04001] gi|228789920|gb|EEM37741.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar sotto str. T04001] Length = 246 Score = 96.4 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DLF GIGGI L + +E EI P++ K ++P IF DI + Sbjct: 1 MKMLDLFSGIGGISLAADWA----GIETTAFCEIEPFNQKVLNKHWPKVPIFSDIRTLTK 56 Query: 62 QDIPD--HDV-----LLAGFPCQPFSQAG 83 Q + + DV + GFPCQP+S AG Sbjct: 57 QSLEERGVDVGTISIVAGGFPCQPYSVAG 85 >gi|258406639|ref|YP_003199380.1| transcriptional regulator, XRE family [Desulfohalobium retbaense DSM 5692] gi|257798866|gb|ACV69802.1| transcriptional regulator, XRE family [Desulfohalobium retbaense DSM 5692] Length = 468 Score = 96.4 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L LF G GG L E++P K Y+ NFPN+ G DI +I+ Sbjct: 117 LNAISLFSGCGGFSLGFSAA----GFNVRGFLELDPGLRKIYRLNFPNSFEMGGDITQIQ 172 Query: 61 TQDIP-------DHDVLLAGFPCQPFSQAG 83 I D DV++ G PCQ FS +G Sbjct: 173 DAKIKNYKSLIGDIDVIIGGPPCQGFSLSG 202 >gi|116492328|ref|YP_804063.1| site-specific DNA methylase [Pediococcus pentosaceus ATCC 25745] gi|116102478|gb|ABJ67621.1| Site-specific DNA methylase [Pediococcus pentosaceus ATCC 25745] Length = 428 Score = 96.4 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPN-TLIFGD 55 LK+ +LF G+GG R+ LE + +S++ P + + Y +FPN I + Sbjct: 5 LKVLELFAGVGGFRVGLEHANASL-YKTLWSNQWEPGKKSQDAFEVYNYHFPNSENINEN 63 Query: 56 IAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 I++I + + D+++ GFPCQ +S A Sbjct: 64 ISEISNEKFKTMNADLIVGGFPCQDYSVA 92 >gi|126658774|ref|ZP_01729918.1| site-specific DNA-methyltransferase [Cyanothece sp. CCY0110] gi|126619872|gb|EAZ90597.1| site-specific DNA-methyltransferase [Cyanothece sp. CCY0110] Length = 461 Score = 96.4 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 F G G+ L +EQT + + EI+ Y +T N PN + GDI DI Sbjct: 74 ISFFSGAMGLDLGIEQT----GFDIKLACEIDKYCRQTITLNKPNIALVGDINSYSADDI 129 Query: 65 ---------PDHDVLLAGFPCQPFSQAG 83 D D+++ G PCQ FS AG Sbjct: 130 LSYAGLTRSDDIDLIVGGPPCQAFSTAG 157 >gi|311977245|gb|ADQ20501.1| M2.BfuAI [Lysinibacillus fusiformis] Length = 342 Score = 96.4 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +K+ DLFCG GG+ L ++ E + + NP KT++ NFP F DI ++ Sbjct: 1 MKVVDLFCGAGGLHLGFQEA----GFEIKLAVDSNPIVAKTHEFNFPEIPFFSDDINQLT 56 Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83 ++ + DVL+ G PCQ FS G Sbjct: 57 GFELFNLIEGEEIDVLIGGPPCQGFSTIG 85 >gi|293365989|ref|ZP_06612691.1| modification methylase Sau3AI [Streptococcus oralis ATCC 35037] gi|307702387|ref|ZP_07639344.1| DNA-cytosine methyltransferase [Streptococcus oralis ATCC 35037] gi|291315532|gb|EFE55983.1| modification methylase Sau3AI [Streptococcus oralis ATCC 35037] gi|307624064|gb|EFO03044.1| DNA-cytosine methyltransferase [Streptococcus oralis ATCC 35037] Length = 421 Score = 96.4 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 11/90 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-- 54 +K+ +LF G+GG R+ LE + ++++ P + + Y +FPN+ Sbjct: 1 MKVLELFAGVGGFRIGLENADKQL-FKTKWANQWEPSRKSQDAFEVYDYHFPNSENINIS 59 Query: 55 --DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI + + D D+++ GFPCQ +S A Sbjct: 60 ISDITDEQFSKM-DADMIVGGFPCQDYSVA 88 >gi|332711623|ref|ZP_08431554.1| DNA-methyltransferase [Lyngbya majuscula 3L] gi|332349601|gb|EGJ29210.1| DNA-methyltransferase [Lyngbya majuscula 3L] Length = 427 Score = 96.4 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++ +LF G GG+ L E + EI+ V T + N P+ +I DIA + Sbjct: 81 FRVIELFAGCGGMALGFENA----GLTTKLLVEIDKDCVNTLKLNRPSWEIIPEDIANVD 136 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 + D D++ G PCQ FS AG Sbjct: 137 FTNYKDNVDIVAGGVPCQAFSYAG 160 >gi|222151724|ref|YP_002560880.1| type II modification methyltransferase [Macrococcus caseolyticus JCSC5402] gi|222120849|dbj|BAH18184.1| type II modification methyltransferase [Macrococcus caseolyticus JCSC5402] Length = 413 Score = 96.4 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-D 55 +K+ ++F G+GG R+ LE T N+ E ++++ P ++ Y NF + D Sbjct: 4 IKVAEMFAGVGGFRIGLENTNNNM-FEVTWANQWEPSRKVQHAFDCYSRNFKTGIHSNQD 62 Query: 56 IAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 I ++ ++ + D+++ GFPCQ +S A Sbjct: 63 ITEVPNAELAATNVDMIVGGFPCQDYSVA 91 >gi|289177801|gb|ADC85047.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp. lactis BB-12] Length = 513 Score = 96.4 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63 F G GG+ L E+ + E N T N P+ + GDI KI + Sbjct: 137 LSFFSGAGGLDLGFERA----GISAALYCENNRECRMTLHRNRPDVALLGDITKISADEV 192 Query: 64 -----IP---DHDVLLAGFPCQPFSQAG 83 IP + DV+ G PCQ FS AG Sbjct: 193 RRMARIPQGREIDVMFGGPPCQAFSTAG 220 >gi|183602700|ref|ZP_02964064.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis HN019] gi|219682526|ref|YP_002468909.1| modification methylase SinI [Bifidobacterium animalis subsp. lactis AD011] gi|241190098|ref|YP_002967492.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195504|ref|YP_002969059.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218118|gb|EDT88765.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis HN019] gi|219620176|gb|ACL28333.1| modification methylase SinI [Bifidobacterium animalis subsp. lactis AD011] gi|240248490|gb|ACS45430.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250058|gb|ACS46997.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793085|gb|ADG32620.1| site-specific DNA-methyltransferase [Bifidobacterium animalis subsp. lactis V9] Length = 453 Score = 96.4 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63 F G GG+ L E+ + E N T N P+ + GDI KI + Sbjct: 77 LSFFSGAGGLDLGFERA----GISAALYCENNRECRMTLHRNRPDVALLGDITKISADEV 132 Query: 64 -----IP---DHDVLLAGFPCQPFSQAG 83 IP + DV+ G PCQ FS AG Sbjct: 133 RRMARIPQGREIDVMFGGPPCQAFSTAG 160 >gi|304407248|ref|ZP_07388901.1| DNA-cytosine methyltransferase [Paenibacillus curdlanolyticus YK9] gi|304343689|gb|EFM09530.1| DNA-cytosine methyltransferase [Paenibacillus curdlanolyticus YK9] Length = 401 Score = 96.4 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 11/90 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M K+ DLF G GG+ Q + S EI+ + T + N P T ++ D+ ++ Sbjct: 1 MYKVLDLFSGCGGLGEGFLQA----GFDIAASVEIDEKACATQKFNHPETQVLQADLTQL 56 Query: 60 KTQD------IPDHDVLLAGFPCQPFSQAG 83 +D I + D+++ G PCQ FS G Sbjct: 57 APRDLSLATGITNFDLIIGGPPCQGFSLIG 86 >gi|213692102|ref|YP_002322688.1| C-5 cytosine-specific DNA methylase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523563|gb|ACJ52310.1| C-5 cytosine-specific DNA methylase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458217|dbj|BAJ68838.1| hypothetical phage protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 880 Score = 96.4 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP--YSVKTYQANFPNTLIFGDIAKIKT 61 I LF G GG+ L ++ + ++S+I P ++++Y A+ + GDI I Sbjct: 11 IGSLFSGYGGLDLGVDMALGG-GMRVAYTSDIEPGPCAIESYHAHGDDCPNLGDITGIDF 69 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + +PD DV++ G PCQ S AG Sbjct: 70 EKLPDTDVVVGGSPCQSLSLAG 91 >gi|315613695|ref|ZP_07888602.1| modification methylase Sau3AI [Streptococcus sanguinis ATCC 49296] gi|315314386|gb|EFU62431.1| modification methylase Sau3AI [Streptococcus sanguinis ATCC 49296] Length = 421 Score = 96.4 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 11/90 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-- 54 +K+ +LF G+GG R+ LE + ++++ P + + Y +FPN+ Sbjct: 1 MKVLELFAGVGGFRIGLENADKQL-FKTKWANQWEPSRKSQDAFEVYDYHFPNSENINIS 59 Query: 55 --DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI + + D D+++ GFPCQ +S A Sbjct: 60 ISDITDEQFSKM-DADMIVGGFPCQDYSVA 88 >gi|157826842|ref|YP_001495906.1| cytosine-C5 specific DNA methylase [Rickettsia bellii OSU 85-389] gi|157802146|gb|ABV78869.1| Cytosine-C5 specific DNA methylase [Rickettsia bellii OSU 85-389] Length = 374 Score = 96.4 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 25/107 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFN-----------------------HRNVECFFSSEINPY 38 +K+ LF G GG+ L E FN E F ++I Sbjct: 31 IKVISLFSGCGGLDLGFEGNFNIHESCIKDDDFIKSKNGNTVILKDNPFEIVFCNDIMQE 90 Query: 39 SVKTYQANFPNTLIFG--DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + ++ANF N L + I ++K +P D+++ GFPCQ FS AG Sbjct: 91 AKVAWEANFSNKLEYSTKSIRELKGYLLPKADLVIGGFPCQDFSLAG 137 >gi|291525775|emb|CBK91362.1| DNA-methyltransferase (dcm) [Eubacterium rectale DSM 17629] Length = 510 Score = 96.0 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ LF GIGG L ++ ++SEI+P+ + FP GDI K+ Sbjct: 4 LKLGSLFDGIGGFPL----AATMNDIRPVWASEIDPFPMAVTAYRFPEMKHMGDITKLHG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++P DV+ G PCQ S AG Sbjct: 60 ANLPVVDVIAGGSPCQDLSVAG 81 >gi|330723541|gb|AEC45911.1| cytosine specific DNA methyltransferase [Mycoplasma hyorhinis MCLD] Length = 416 Score = 96.0 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 17/95 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGD 55 K DLF G GG+ DL E S EI P +V+TY NF N + D Sbjct: 92 YKFIDLFSGAGGLSCDLVMA----GFEPIASVEIMPDAVETYVYNFQNRKKKEELIETRD 147 Query: 56 IAKIKTQD-----IPD--HDVLLAGFPCQPFSQAG 83 I +K ++ D D+++ GFPCQ FS AG Sbjct: 148 IRDVKVKEELYNKFKDTDIDLIVGGFPCQGFSMAG 182 >gi|225862883|ref|YP_002748261.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102] gi|225787129|gb|ACO27346.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102] Length = 367 Score = 96.0 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 11/88 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKT 61 KI DLF G+GG L E E F+ + ++ TY N + + DIA + Sbjct: 5 KIMDLFSGVGGFSLGFEMA----GYETIFAIDFWKDAIATYNLNRKKDIAVHMDIANLTN 60 Query: 62 QDIP----DHDV--LLAGFPCQPFSQAG 83 + + +HD+ ++ G PCQ FS G Sbjct: 61 EHLRKLKEEHDIEGIIGGPPCQGFSTVG 88 >gi|228478395|ref|ZP_04063003.1| modification methylase HaeIII [Streptococcus salivarius SK126] gi|228250074|gb|EEK09344.1| modification methylase HaeIII [Streptococcus salivarius SK126] Length = 387 Score = 96.0 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 14/97 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN------VECFFSSEINPYSVKTYQANFPN-TLIF 53 M+++ DLF G GG+ + T + N F++E N + + ++ N+P T+I Sbjct: 1 MIEVIDLFSGAGGLTFGFQNTIKNNNFVFRNDFNIRFANEFNRDAAEAFRLNYPEITMIE 60 Query: 54 GDIAKIKTQDIPD-------HDVLLAGFPCQPFSQAG 83 DIA I + D+++ G PCQ FS G Sbjct: 61 DDIANIDESFLKSKGISPKGVDLVIGGPPCQSFSTVG 97 >gi|229133328|ref|ZP_04262157.1| Modification methylase Sau3AI [Bacillus cereus BDRD-ST196] gi|228650144|gb|EEL06150.1| Modification methylase Sau3AI [Bacillus cereus BDRD-ST196] Length = 413 Score = 96.0 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 12/91 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+ + +LF G+GG R+ LE+ + + + ++ P + Y F + I Sbjct: 1 MINVIELFAGVGGFRIGLEKMNH---FQVVWGNQWEPSKKAQDAFHCYAQRFQDKGIHCN 57 Query: 54 GDIAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 DIA + ++I D D+++ GFPCQ +S A Sbjct: 58 QDIATVTDEEIQKIDADMIVGGFPCQDYSVA 88 >gi|19718332|ref|NP_604405.1| plasmid encoded methyltransferase Pem [Salmonella enteritidis] gi|19526586|gb|AAL87019.1| plasmid encoded methyltransferase Pem [Salmonella enterica subsp. enterica serovar Enteritidis] Length = 382 Score = 96.0 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 ++ ++F G GG+ LE + E+N ++ + + NF +F GDI Sbjct: 1 MRSLEIFSGAGGLAKGLELA----GFQHVGFVELNKHACDSLRLNFDEEKVFQGDIKNYD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 I D++ G PCQPFS G Sbjct: 57 LSSIDKIDIVAGGPPCQPFSLGG 79 >gi|400283|sp|P31974|MTA1_CELCE RecName: Full=Modification methylase AluI; Short=M.AluI; AltName: Full=Cytosine-specific methyltransferase AluI gi|580712|emb|CAA77866.1| Alu I DNA-(cytosine C5)-methyltransferase [Cellulosimicrobium cellulans] gi|300124216|gb|ADJ68011.1| M.AluI [Cellulosimicrobium cellulans] Length = 521 Score = 96.0 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 14/88 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----- 58 DLF GIGG L T C ++ EI+ + Y+ N+ N GDI Sbjct: 10 FVDLFAGIGGFHAALAAT----GGVCEYAVEIDREAAAVYERNW-NKPALGDITDDANDE 64 Query: 59 ---IKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D P DVL GFPCQPFS++G Sbjct: 65 GVTLRGYDGP-IDVLTGGFPCQPFSKSG 91 >gi|158284395|ref|XP_306830.2| Anopheles gambiae str. PEST AGAP012836-PA [Anopheles gambiae str. PEST] gi|157021124|gb|EAA45924.2| AGAP012836-PA [Anopheles gambiae str. PEST] Length = 238 Score = 96.0 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 5/84 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKT 61 ++ +LF GIGG+R+ LEQ E + ++NP + + Y+ NF T+ G+I + Sbjct: 16 RVLELFSGIGGMRMALEQAGKE--FEIVSAIDVNPIANEVYKHNFGAKTVRNGNILSLTA 73 Query: 62 QDIP--DHDVLLAGFPCQPFSQAG 83 + + D +L PCQPF++ G Sbjct: 74 EKVTKLKVDTILMSPPCQPFTRNG 97 >gi|75812889|ref|YP_320506.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] gi|75705645|gb|ABA25317.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] Length = 415 Score = 96.0 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 17/92 (18%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 LF G+GG L E E + + NP + TYQ NFP+ T++ DI ++ Q+ Sbjct: 12 ISLFSGVGGFDLGFEAA----GFEIAIAIDNNPIVLATYQHNFPHATVLCKDIREVTAQE 67 Query: 64 IP------------DHDVLLAGFPCQPFSQAG 83 I + + G PCQ FS AG Sbjct: 68 IRACIQAKYVDWDGEIHTVFGGPPCQGFSVAG 99 >gi|193071751|ref|ZP_03052649.1| DNA-cytosine methyltransferase [Escherichia coli E110019] gi|192954951|gb|EDV85456.1| DNA-cytosine methyltransferase [Escherichia coli E110019] Length = 374 Score = 96.0 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 1/81 (1%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-K 60 ++ DLFCG GG+ E + + N ++ TY ANF + +I + Sbjct: 9 FRVIDLFCGAGGLSYGFLHGEMSDYFESILAIDNNAAAINTYNANFGLHGVQANIEEWAS 68 Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81 + +P+ DV++ G PCQ FS Sbjct: 69 SNTVPEADVVIGGPPCQGFSL 89 >gi|148380278|ref|YP_001254819.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum A str. ATCC 3502] gi|148289762|emb|CAL83870.1| putative C-5 cytosine-specific DNA methylase [Clostridium botulinum A str. ATCC 3502] Length = 340 Score = 96.0 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59 +K+ LF GIG L +++ E EI+ Y+ Y N +L GD++KI Sbjct: 4 IKLLSLFSGIGAFEKALSNI--NQDHEIINYCEIDKYASYAYSVLHNANESLNLGDVSKI 61 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + D D+L G PCQ FS AG Sbjct: 62 NPDTLKDFDLLTHGSPCQSFSLAG 85 >gi|70606458|ref|YP_255328.1| site-specific DNA methylase [Sulfolobus acidocaldarius DSM 639] gi|68567106|gb|AAY80035.1| site-specific DNA methylase [Sulfolobus acidocaldarius DSM 639] Length = 319 Score = 96.0 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 10/86 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 K+ DLF G GG L + E S +IN + +TY NFPNT +I DI I Sbjct: 5 KVIDLFSGAGGFSLGFNR----EPFEIKLSVDINHAAARTYSINFPNTVVIEDDIRNITG 60 Query: 62 QDIP-----DHDVLLAGFPCQPFSQA 82 +DI + D+++ PC+PF+ A Sbjct: 61 RDIRYLIGGEPDIIIGSPPCEPFTGA 86 >gi|323143137|ref|ZP_08077837.1| DNA (cytosine-5-)-methyltransferase [Succinatimonas hippei YIT 12066] gi|322417087|gb|EFY07721.1| DNA (cytosine-5-)-methyltransferase [Succinatimonas hippei YIT 12066] Length = 541 Score = 95.6 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLF G GG+ L QT E + E +P TY+ N PN + GD+ D Sbjct: 5 VVDLFAGAGGLSLGFVQTGK---YEMKVAFERDPNMQATYRLNHPNVELQGDVCGADYAD 61 Query: 64 IPD----HDVLLAGFPCQPFSQA 82 I DV++ G PCQ FS A Sbjct: 62 IQKRYGAIDVVIGGPPCQGFSNA 84 >gi|328946253|gb|EGG40397.1| modification methylase Sau96I [Streptococcus sanguinis SK1087] Length = 333 Score = 95.6 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +K+ +LF G GG+ L +E+ E E + + +T ++N P+ +I DI KI Sbjct: 1 MKVIELFAGAGGLALGIERA----GFESIGLIEFDKAASETLKSNRPDWNVIHEDIEKIS 56 Query: 61 TQDIP--------DHDVLLAGFPCQPFSQAG 83 ++ + D+L G PCQ FS AG Sbjct: 57 PLNLEELFNIRKGELDLLSGGAPCQSFSYAG 87 >gi|216165|gb|AAA32601.1| methyltransferase (ttg start codon) [Bacillus phage SPbeta] Length = 143 Score = 95.6 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 L++ LF GIG L + E SEI+ Y++K+Y A TL GDI+K Sbjct: 4 LRVMSLFSGIGAFEAALRNIG--VDYELIGFSEIDKYAIKSYCAIHNVSETLNVGDISKA 61 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K +IP D+L +GFPC FS AG Sbjct: 62 KKDNIPYFDLLTSGFPCPTFSVAG 85 >gi|257058000|ref|YP_003135888.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|256588166|gb|ACU99052.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 423 Score = 95.6 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L + +LF G GG+ L LE ++ EI+ V T Q N P +I D+ KI Sbjct: 73 LSVIELFAGCGGMALGLENA----GLKTELLVEIDRDCVNTLQKNRPYWPIIQEDVTKID 128 Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83 + D++L GFPCQ FS AG Sbjct: 129 FRSYQGKIDIVLGGFPCQAFSYAG 152 >gi|332652901|ref|ZP_08418646.1| DNA (cytosine-5-)-methyltransferase [Ruminococcaceae bacterium D16] gi|332518047|gb|EGJ47650.1| DNA (cytosine-5-)-methyltransferase [Ruminococcaceae bacterium D16] Length = 542 Score = 95.6 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DLF G GG+ L QT + + + E +PY +TY+ N P + GD+ Sbjct: 4 YTAVDLFAGAGGLSLGFMQT---QKYDIKVAFENSPYMQETYRQNHPGVEVQGDVCTADY 60 Query: 62 QDI----PDHDVLLAGFPCQPFSQA 82 +DI DV++ G PCQ FS A Sbjct: 61 EDIMRRYGKIDVVIGGPPCQGFSNA 85 >gi|255073161|ref|XP_002500255.1| DNA methyltransferase [Micromonas sp. RCC299] gi|226515517|gb|ACO61513.1| DNA methyltransferase [Micromonas sp. RCC299] Length = 599 Score = 95.6 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 17/95 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---------- 51 ++LF G+GG + L F+SE+ ++ +TY A+ + Sbjct: 264 FTFSELFAGVGGFGVAL----RSLGGTPVFASELCGHARRTYLAHHGGSWGDDGGTDARP 319 Query: 52 ---IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GDI + +P HD+L GFPCQ FS+ G Sbjct: 320 PLVCCGDITDVCETSMPPHDLLTGGFPCQSFSRRG 354 >gi|319936414|ref|ZP_08010830.1| cytosine-specific methyltransferase [Coprobacillus sp. 29_1] gi|319808529|gb|EFW05081.1| cytosine-specific methyltransferase [Coprobacillus sp. 29_1] Length = 418 Score = 95.2 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 15/95 (15%) Query: 3 KITDLFCGIGGIRLDLE---------QTFNHRNVECFFSSEINP-----YSVKTYQANFP 48 + +LF G+GG R+ L + + ++++ P ++ Y F Sbjct: 4 TVVELFAGVGGFRVGLNHITGFDENGRAIENGEWNFVWANQWEPSTKVQHAFDCYCKRFG 63 Query: 49 NTLIFG-DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 N DI+ + DIP+H +L+ GFPCQ +S A Sbjct: 64 NENHSNVDISLVNKSDIPNHTLLVGGFPCQDYSVA 98 >gi|205374924|ref|ZP_03227716.1| DNA-cytosine methyltransferase [Bacillus coahuilensis m4-4] Length = 323 Score = 95.2 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-K 60 +++ DLF G GG+ L + E + E ++ Y+ NF + + D++ + Sbjct: 1 MRVIDLFSGCGGMSLGFQNA----GFEIVSAFENWDEAIDIYRKNFQHPICKYDLSDVKD 56 Query: 61 TQDIPDH--DVLLAGFPCQPFSQAG 83 D D+++ G PCQ +S AG Sbjct: 57 YNDFSKLNPDIIIGGPPCQDYSSAG 81 >gi|322372404|ref|ZP_08046940.1| modification methylase DdeI [Streptococcus sp. C150] gi|321277446|gb|EFX54515.1| modification methylase DdeI [Streptococcus sp. C150] Length = 387 Score = 95.2 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 14/97 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN------VECFFSSEINPYSVKTYQANFPN-TLIF 53 M+++ DLF G GG+ + T + N F++E N + + ++ N+P T+I Sbjct: 1 MIEVIDLFSGAGGLTFGFQNTIKNNNFVFRNDFNIRFANEFNRDAAEAFRLNYPKITMIE 60 Query: 54 GDIAKIKTQDIPD-------HDVLLAGFPCQPFSQAG 83 DIA I + D+++ G PCQ FS G Sbjct: 61 DDIANIDESFLKSKGISSKGVDLVIGGPPCQSFSTVG 97 >gi|317132209|ref|YP_004091523.1| DNA-cytosine methyltransferase [Ethanoligenens harbinense YUAN-3] gi|315470188|gb|ADU26792.1| DNA-cytosine methyltransferase [Ethanoligenens harbinense YUAN-3] Length = 438 Score = 95.2 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 9/83 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAKI 59 DLFCG GG+ + LEQ + + + +V TY+ N P ++I DI +I Sbjct: 62 FIDLFCGAGGLSVGLEQ----EGFRPVAAVDKDQSAVLTYRFNRPWLTDGSIIHEDIREI 117 Query: 60 KTQDI-PDHDVLLAGFPCQPFSQ 81 QDI P V++ G PCQ FS Sbjct: 118 VNQDIFPHVPVVVGGPPCQGFSV 140 >gi|21241348|ref|NP_640930.1| cytosine methyltransferase [Xanthomonas axonopodis pv. citri str. 306] gi|21106676|gb|AAM35466.1| cytosine methyltransferase [Xanthomonas axonopodis pv. citri str. 306] Length = 106 Score = 95.2 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + LF G GG+ ++ FS++I + KT + FP+ T+ GDIA + Sbjct: 17 VISLFSGCGGMDFGIKAA----GGRIVFSNDILADACKTLEKYFPDSTVSCGDIAAL--H 70 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + P+ DV++ G+PCQ FS AG Sbjct: 71 EFPEADVVVGGYPCQSFSMAG 91 >gi|302387870|ref|YP_003823692.1| DNA-cytosine methyltransferase [Clostridium saccharolyticum WM1] gi|302198498|gb|ADL06069.1| DNA-cytosine methyltransferase [Clostridium saccharolyticum WM1] Length = 569 Score = 95.2 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 36/114 (31%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------- 48 + DLF GIGG R LE++ + C EI+ Y+ K+Y A + Sbjct: 1 MTFLDLFAGIGGFRRGLERSGH----TCVGHVEIDKYANKSYMAMYELAPCPYREDAGSN 56 Query: 49 -------------------NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI +I+ +IP ++ GFPC S AG Sbjct: 57 FSMMCKPEVRKNCDGKNCTGEWYAKDIKQIRAGEIPKAEIWTFGFPCTDISIAG 110 >gi|291543312|emb|CBL16421.1| DNA-methyltransferase (dcm) [Ruminococcus sp. 18P13] Length = 668 Score = 95.2 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L + ++ + SEI PY+V P+ +GD++K+ Sbjct: 6 LTLGSLFSGSGGFEL----AGIYAGIKPVWLSEIEPYAVLVTHNRLPDVKHYGDVSKLSG 61 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+P D++ G PCQ S AG Sbjct: 62 ADLPPVDIITFGSPCQDMSIAG 83 >gi|331027909|ref|YP_004421459.1| DNA methylase [Synechococcus phage S-CBS2] gi|294805522|gb|ADF42361.1| DNA methylase [Synechococcus phage S-CBS2] Length = 286 Score = 95.2 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G+ ++ L + + +F+SEI+ Y+++ Q N+PNT G I +K Sbjct: 1 MNVLSLFDGMSCGQIALNKLGIK--YDNYFASEIDKYAIQVTQKNYPNTKQIGSITDVKG 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + +P D+L G PCQ FS AG Sbjct: 59 EYLPKIDLLFGGSPCQSFSNAG 80 >gi|158291464|ref|XP_312975.4| AGAP004101-PA [Anopheles gambiae str. PEST] gi|157017559|gb|EAA08679.4| AGAP004101-PA [Anopheles gambiae str. PEST] Length = 345 Score = 95.2 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 5/84 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKT 61 ++ +LF GIGG+R+ LE+ E + ++NP + + Y+ NF T+ G+I + Sbjct: 16 RVLELFSGIGGMRMALEEAGKE--FEIVSAIDVNPIANEVYKHNFGAETVRNGNILSLTA 73 Query: 62 QDIP--DHDVLLAGFPCQPFSQAG 83 + + D +L PCQPF++ G Sbjct: 74 EKVTKLKVDTILMSPPCQPFTRNG 97 >gi|161528981|ref|YP_001582807.1| DNA-cytosine methyltransferase [Nitrosopumilus maritimus SCM1] gi|160340282|gb|ABX13369.1| DNA-cytosine methyltransferase [Nitrosopumilus maritimus SCM1] Length = 360 Score = 95.2 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 10/85 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + DLF G GG+ L + + + E + + +TY NF T LI DI IK+ Sbjct: 8 VIDLFAGSGGLSLGFKNA----GFKVIAAVEFDKSAAETYSKNFKETKLIVDDIKNIKSN 63 Query: 63 DIPDHD-----VLLAGFPCQPFSQA 82 ++ ++ G PCQP+S A Sbjct: 64 ELKKITSKERFCVIGGPPCQPYSNA 88 >gi|294155572|ref|YP_003559956.1| cytosine-specific DNA modification methyltransferase [Mycoplasma crocodyli MP145] gi|291599876|gb|ADE19372.1| cytosine-specific DNA modification methyltransferase [Mycoplasma crocodyli MP145] Length = 415 Score = 94.8 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 15/96 (15%) Query: 2 LKITDLFCGIGGIRLDLE---------QTFNHRNVECFFSSEINP-----YSVKTYQANF 47 L + +LF G+GG R+ L + + N ++++ P ++ + Y F Sbjct: 3 LSVVELFAGVGGFRVGLNHINSFDENGRAIENNNWNFVWANQYEPSSNKQHAFECYITRF 62 Query: 48 PNTLI-FGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 + DI+K+ + IPDH++L+ GFPCQ +S A Sbjct: 63 GDKNHSNDDISKVDKKVIPDHNLLVGGFPCQDYSVA 98 >gi|323514189|gb|ADX89637.1| putative DNA-methyltransferase, type II restriction-modification system (Enterobacteria phage RB16) [Vibrio phage ICP1_2004_A] Length = 332 Score = 94.8 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G+ R+ LE+ +++SEI+ ++K QAN+P+ + GD+ K + Sbjct: 1 MNVLSLFDGMACCRIALERAGIQVG--NYYASEIDKNAIKVAQANWPDNIQLGDVTKWQE 58 Query: 62 Q--DIPDHDVLLAGFPCQPFSQAG 83 D ++ GFPCQ +S AG Sbjct: 59 WGIDWASIGLVTGGFPCQAWSIAG 82 >gi|10955252|ref|NP_052188.1| DNA-methyltransferase [Escherichia coli] gi|1237268|gb|AAC37145.1| eco29kIM [Escherichia coli] gi|2660513|emb|CAA04944.1| DNA-methyltransferase [Escherichia coli] Length = 382 Score = 94.8 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 ++ ++F G GG+ LE + E+N ++ + + NF +F GDI Sbjct: 1 MRSLEIFSGAGGLAKGLELA----GFQHVGFVELNKHACDSLRLNFDEEKVFQGDIKNYD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + D++ G PCQPFS G Sbjct: 57 LSSLDKIDIVAGGPPCQPFSLGG 79 >gi|12583593|emb|CAC27339.1| Sth368IM methyltranferase [Streptococcus thermophilus] gi|15485439|emb|CAC67533.1| M.Sth368I methyltransferase [Streptococcus thermophilus] Length = 421 Score = 94.8 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-D 55 + + +LF G+GG R+ LE + + + +S++ P + + Y +FP++ G Sbjct: 1 MNVLELFAGVGGFRIGLENSDKNF-FKTRWSNQWEPSRKSQDAFEVYNYHFPDSENIGYS 59 Query: 56 IAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 I+ I + D D+++ GFPCQ +S A Sbjct: 60 ISDISDEKFASMDADMIVGGFPCQDYSVA 88 >gi|167046802|ref|YP_001661472.1| DNA methyltransferase [Acinetobacter venetianus] gi|83833711|gb|ABC47668.1| DNA methyltransferase [Acinetobacter venetianus] Length = 737 Score = 94.8 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L LF G GG+ + ++ ++ C +S+I + TY N+P+ F DI +I Sbjct: 8 LNFISLFTGAGGLDIGFKEAGHN----CLLASDIMKEAELTYSYNYPSVPFFREDIRQIP 63 Query: 61 TQDIP------DHDVLLAGFPCQPFSQAG 83 + DV++ G PCQ FS G Sbjct: 64 LDKFKKVIGDKEVDVIIGGPPCQGFSNMG 92 Score = 83.7 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 16/92 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G+GG L+ ++C ++ + Y+V+ Y+ N + A + Sbjct: 371 LRFADLFSGVGGFTEGLKSA----GLDCILGADFDRYAVEAYRKNHTDHECLE--ADLSD 424 Query: 62 QDIP----------DHDVLLAGFPCQPFSQAG 83 ++I D+++ G PCQ FS G Sbjct: 425 EEIQHNIAMRLKEQKVDLVVGGPPCQGFSIFG 456 >gi|10954474|ref|NP_039765.1| DNA cytosine-5 methylase subunit A [Methanothermobacter thermautotrophicus] gi|266583|sp|P29567|MTHT_METTF RecName: Full=Modification methylase MthTI; Short=M.MthTI; AltName: Full=Cytosine-specific methyltransferase MthTI gi|44641|emb|CAA48436.1| TIM [Methanothermobacter thermautotrophicus] gi|149743|gb|AAA73370.1| TIM [Methanothermobacter thermautotrophicus] Length = 330 Score = 94.8 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + I F G GG+ L + F+++ KT++ N + I +K Sbjct: 3 MDIASFFSGAGGLDLGFTKA----GFNIVFANDNWKGCWKTFEKNHGIKINKKPIEWLKP 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +IPD + G PCQ +S AG Sbjct: 59 SEIPDVVGFIGGPPCQSWSLAG 80 >gi|119493084|ref|ZP_01624009.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106] gi|119452829|gb|EAW34004.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106] Length = 441 Score = 94.8 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 DLF G GG+ L EQ + + EI+P +Q NFP ++ DI+K+ + Sbjct: 17 VDLFAGSGGMTLGFEQA----GFDVLAAVEIDPIHCAVHQYNFPLWSVFCEDISKLSSDK 72 Query: 64 IP--------DHDVLLAGFPCQPFSQAG 83 I D DV+ G PCQ FS G Sbjct: 73 IRIYSSIKNQDIDVVFGGPPCQGFSLMG 100 >gi|312133558|ref|YP_004000897.1| dcm2 [Bifidobacterium longum subsp. longum BBMN68] gi|311772809|gb|ADQ02297.1| Dcm2 [Bifidobacterium longum subsp. longum BBMN68] Length = 429 Score = 94.8 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 23/104 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN---------VECFFSSEINP-------YSVKTYQA 45 ++I +LF G+GG RL L+ + ++++ P ++ + Y+ Sbjct: 5 IRIAELFAGVGGFRLGLDGYGKKGDAFYMEPAGPFHTVWANQWEPTGQESKQFAWRCYEK 64 Query: 46 NFPN-TLIFGDIAKIKTQ------DIPDHDVLLAGFPCQPFSQA 82 F + + DIAK+ + IP+ D+L+ GFPCQ +S A Sbjct: 65 RFGEGSCVNEDIAKVLDEVDAGTRTIPEFDMLVGGFPCQDYSVA 108 >gi|218245850|ref|YP_002371221.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|257058898|ref|YP_003136786.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] gi|218166328|gb|ACK65065.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|256589064|gb|ACU99950.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802] Length = 418 Score = 94.8 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 DLF G GG+ L EQ + S EI+P + NFP ++I DI I Q+ Sbjct: 9 VDLFAGAGGMTLGFEQA----GFDVLASVEIDPIHCLVHHYNFPFWSIICRDIQTITGQE 64 Query: 64 IP--------DHDVLLAGFPCQPFSQAG 83 I DV+ G PCQ FS G Sbjct: 65 IRQLSKVGNHPIDVVFGGPPCQGFSLMG 92 >gi|308389149|gb|ADO31469.1| Cytosine-specific methyltransferase NlaX [Neisseria meningitidis alpha710] Length = 275 Score = 94.8 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + LF GIGG L EQ + + EI+ + FP+ F D+ Sbjct: 5 TVGSLFAGIGGFDLGFEQA----GFQTAWQVEIDEVNRAVLADRFPHARQFADVRTALP- 59 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 D+ DV++ GFPCQ S AG Sbjct: 60 DLWSVDVIVGGFPCQDVSTAG 80 >gi|146305026|ref|YP_001192342.1| DNA-cytosine methyltransferase [Metallosphaera sedula DSM 5348] gi|145703276|gb|ABP96418.1| DNA-cytosine methyltransferase [Metallosphaera sedula DSM 5348] Length = 313 Score = 94.8 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 10/86 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT 61 K+ DLF G GG + + EIN + +TY ANFP T++ DI +I Sbjct: 5 KVVDLFSGAGGFGRGF----KEVGFQIGVAVEINHAAARTYSANFPTTIVLEEDIREITG 60 Query: 62 QDI-----PDHDVLLAGFPCQPFSQA 82 ++I + DV++ PC+PF+ A Sbjct: 61 REIVREIGKEPDVVIGSPPCEPFTAA 86 >gi|288559285|ref|YP_003422771.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1] gi|288541995|gb|ADC45879.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1] Length = 342 Score = 94.8 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 9/86 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61 + DLFCGIGG E + F +I +++T+Q N NT I D+ ++ Sbjct: 5 TVIDLFCGIGGFSKGFEMA----GFDVLFGIDIWDIAIETFQHNHKNTEGILADLTELDD 60 Query: 62 QDIP----DHDVLLAGFPCQPFSQAG 83 DV++AG PCQ FS G Sbjct: 61 DFFKQYTNKVDVIIAGPPCQGFSMCG 86 >gi|194337838|ref|YP_002019632.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme BU-1] gi|194310315|gb|ACF45015.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme BU-1] Length = 409 Score = 94.8 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60 +K ++F G GG+ LE + E E N ++ ++ NF P + FGDI Sbjct: 1 MKTLEIFSGAGGLAKGLELS----GFEHTAFVEFNKHACESLSENFDPARVFFGDIKDFD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + D D++ G PCQPFS G Sbjct: 57 LDSLEDIDIVAGGPPCQPFSLGG 79 >gi|171779450|ref|ZP_02920414.1| hypothetical protein STRINF_01295 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282067|gb|EDT47498.1| hypothetical protein STRINF_01295 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 133 Score = 94.8 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 10/78 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL L + + EC EI+ ++ K+Y+A + + F DI ++ Sbjct: 4 MKFLDLFAGIGGFRLGLTR----QGHECIGFCEIDKFARKSYKAIYETEGEIEFHDIRQV 59 Query: 60 KTQDIP----DHDVLLAG 73 QD D++ G Sbjct: 60 TDQDFRQLRGQVDIICGG 77 >gi|237711274|ref|ZP_04541755.1| site-specific DNA-methyltransferase [Bacteroides sp. 9_1_42FAA] gi|229455118|gb|EEO60839.1| site-specific DNA-methyltransferase [Bacteroides sp. 9_1_42FAA] Length = 296 Score = 94.8 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + +LF GIGG + L+ + E F SEI +++ ++ NFP G + I Sbjct: 1 MVLLELFSGIGGFSMGLQAAG--YSFEKVFFSEIEKHAIANFKYNFPYAEHIGSVTDIAK 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 I D++ G PCQ FS G Sbjct: 59 VGIARPDIITFGSPCQNFSAVG 80 >gi|304390603|ref|ZP_07372556.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326359|gb|EFL93604.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 309 Score = 94.4 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 L+ DLF G GG+ L E + + E +++ Y+ANF + + D++ + Sbjct: 7 LRCVDLFSGCGGMSLGFEMA----GFDVVAAYENWAPALRVYRANFDHPAVEQDLSNVAE 62 Query: 60 KTQDIPDH--DVLLAGFPCQPFSQAG 83 + I D+++ G PCQ FS AG Sbjct: 63 SVESITQFEPDLVIGGPPCQDFSTAG 88 >gi|194098099|ref|YP_002001147.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae NCCP11945] gi|239998556|ref|ZP_04718480.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae 35/02] gi|240013681|ref|ZP_04720594.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae DGI18] gi|240016120|ref|ZP_04722660.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA6140] gi|240080261|ref|ZP_04724804.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae FA19] gi|240112474|ref|ZP_04726964.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae MS11] gi|240115214|ref|ZP_04729276.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae PID18] gi|240120750|ref|ZP_04733712.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae PID24-1] gi|240123054|ref|ZP_04736010.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae PID332] gi|240125307|ref|ZP_04738193.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae SK-92-679] gi|193933389|gb|ACF29213.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae NCCP11945] gi|317163831|gb|ADV07372.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae TCDC-NG08107] Length = 347 Score = 94.4 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 6/70 (8%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD--IPDHDVLL 71 + L Q E ++++ + ++ ++++ N + ++ GDI +I D IPD D++L Sbjct: 1 MDLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPNDPTIPDCDIIL 56 Query: 72 AGFPCQPFSQ 81 GFPCQ FS Sbjct: 57 GGFPCQDFSM 66 >gi|127439|sp|P05302|MTD1_DESNO RecName: Full=Modification methylase DdeI; Short=M.DdeI; AltName: Full=Cytosine-specific methyltransferase DdeI gi|79418|pir||S00543 site-specific DNA-methyltransferase (cytosine-specific) (EC 2.1.1.73) DdeI - Desulfovibrio desulfuricans gi|40795|emb|CAA68505.1| DdeI methylase [Desulfovibrio vulgaris] Length = 415 Score = 94.4 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + I DLF G GG + + E + ++ +TY N PN +I DI + Sbjct: 1 MNIIDLFAGCGGFSHGFKMA----GYNSILAIEKDLWASQTYSFNNPNVSVITEDITTLD 56 Query: 61 TQDIP----DHDVLLAGFPCQPFSQAG 83 D+ D D ++ G PCQ FS +G Sbjct: 57 PGDLKISVSDVDGIIGGPPCQGFSLSG 83 >gi|60202518|gb|AAX14650.1| BbvCI methyltransferase 1 [Brevibacillus brevis] Length = 429 Score = 94.4 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 L DLF G GG L + E++ ++ +T++ NFP ++ DI +I Sbjct: 19 LTAIDLFAGAGGFSLGFSMA----GFRVTHAIEVDKWAAETFEVNFPRTKVVTRDIQQIS 74 Query: 61 TQDIPD-HD----VLLAGFPCQPFS 80 ++I D D V++ G PCQ FS Sbjct: 75 DEEIKDIIDERPLVVIGGPPCQGFS 99 >gi|288926887|ref|ZP_06420787.1| modification methylase HindV (Cytosine-specific methyltransferase HindV) [Prevotella buccae D17] gi|288336326|gb|EFC74707.1| modification methylase HindV (Cytosine-specific methyltransferase HindV) [Prevotella buccae D17] Length = 313 Score = 94.4 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DLFCG GG+ L E+ +E + + ++ Y+ NF + I D+ +K Sbjct: 1 MKVVDLFCGCGGLSLGFEKA----GMEIVAAFDNWVDALYVYRNNFSHPAIRADLMNVKA 56 Query: 62 --QDIPDH--DVLLAGFPCQPFSQAG 83 + I D+++ G PCQ FS AG Sbjct: 57 SIEAIRPFKPDMIIGGPPCQDFSSAG 82 >gi|312278085|gb|ADQ62742.1| Cytosine-specific methyltransferase [Streptococcus thermophilus ND03] Length = 424 Score = 94.4 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 11/90 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-- 54 + + +LF G+GG R+ LE +S++ P + + Y +FP++ Sbjct: 1 MNVLELFAGVGGFRIGLENANPDY-FRTLWSNQWEPSRKSQDAFEVYNYHFPDSENINIS 59 Query: 55 --DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI + ++ + D+++ GFPCQ +S A Sbjct: 60 IADITDEQFAEM-NADMIVGGFPCQDYSVA 88 >gi|307277185|ref|ZP_07558289.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX2134] gi|306506115|gb|EFM75281.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX2134] Length = 429 Score = 94.4 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPN-TLIFGD 55 L + +LF G+GG R+ LE + + ++++ P + + Y FPN I + Sbjct: 9 LNVLELFAGVGGFRVGLEHSNADL-FKTKWANQWEPSRKSQDAFEVYDYRFPNSENINRN 67 Query: 56 IAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 I +I ++ D D+++ GFPCQ +S A Sbjct: 68 IEEISNEEFEQMDADIIVGGFPCQDYSVA 96 >gi|240127759|ref|ZP_04740420.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae SK-93-1035] Length = 347 Score = 94.4 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 6/70 (8%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD--IPDHDVLL 71 + L Q E ++++ + ++ ++++ N + ++ GDI +I D IPD D++L Sbjct: 1 MDLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPNDPTIPDCDIIL 56 Query: 72 AGFPCQPFSQ 81 GFPCQ FS Sbjct: 57 GGFPCQDFSM 66 >gi|261368869|ref|ZP_05981752.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum variabile DSM 15176] gi|282568964|gb|EFB74499.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum variabile DSM 15176] Length = 565 Score = 94.4 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K+ DLF G GG+ L QT + + + E +PY +TY+ N + GD+ Sbjct: 5 YKVVDLFSGAGGLSLGFLQT---KKYDIKVAFENSPYMQETYKKNHTGVEVQGDVCAADY 61 Query: 62 QDI----PDHDVLLAGFPCQPFSQA 82 DI DV++ G PCQ FS A Sbjct: 62 ADIVRRYGKIDVVIGGPPCQGFSNA 86 >gi|329769196|ref|ZP_08260616.1| hypothetical protein HMPREF0433_00380 [Gemella sanguinis M325] gi|328839415|gb|EGF88993.1| hypothetical protein HMPREF0433_00380 [Gemella sanguinis M325] Length = 415 Score = 94.4 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 16/95 (16%) Query: 4 ITDLFCGIGGIRLDLE----------QTFNHRNVECFFSSEINP-----YSVKTYQANFP 48 + +LF G+GG R+ L + ++++ P ++ + Y F Sbjct: 5 VVELFAGVGGFRVGLNNITEFNKKTGKALEKNGWNFVWANQYEPSTKAQHAFECYSERFQ 64 Query: 49 N-TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 + DI K+ + IPDH +L+ GFPCQ +S A Sbjct: 65 DGECSNEDINKVDKKSIPDHSLLVGGFPCQDYSVA 99 >gi|226223282|ref|YP_002757389.1| type II DNA modification enzyme (methyltransferase) [Listeria monocytogenes Clip81459] gi|225875744|emb|CAS04447.1| Putative type II DNA modification enzyme (methyltransferase) [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 389 Score = 94.4 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 14/97 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNV------ECFFSSEINPYSVKTYQANFPNTLIFG 54 M+++ DLF G GG+ L + + F++E++ ++ + + NFP + Sbjct: 1 MIRVVDLFSGAGGLTLGFQNRIINNTFLPMSDYNILFANEVDKHASEAFSLNFPQIPMLN 60 Query: 55 -DIAKIKTQDIPDH-------DVLLAGFPCQPFSQAG 83 I ++ + +H D+++ G PCQ FS G Sbjct: 61 CSITELTEDYLDNHEIEYSNIDLVIGGPPCQSFSTVG 97 >gi|127485|sp|P16668|MTS3_STAAU RecName: Full=Modification methylase Sau3AI; Short=M.Sau3AI; AltName: Full=Cytosine-specific methyltransferase Sau3AI gi|153100|gb|AAA26673.1| Sau3AIM protein [Staphylococcus aureus] Length = 412 Score = 94.4 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-D 55 +K+ +LF G+GG RL LE T N + ++++ P ++ Y F N + D Sbjct: 4 IKVVELFAGVGGFRLGLENTKNGI-FDITWANQWEPSRKIQHAFDCYSKRFKNGIHSNKD 62 Query: 56 IAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 IA++ +++ + D+++ GFPCQ +S A Sbjct: 63 IAQVSDEEMANTEADMIVGGFPCQDYSVA 91 >gi|78000013|ref|YP_358798.1| putative methylase [Lactobacillus phage Lc-Nu] gi|37826042|gb|AAR04663.1| putative methylase [Lactobacillus phage Lc-Nu] Length = 261 Score = 94.4 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ +LF GIGGI L + +E E Y Q ++P+ +F D+ K+ Sbjct: 1 MRSLELFAGIGGIALAEQMA----GIEVAGLCEYADYPRAILQKHWPDVPLFKDVTKLDR 56 Query: 62 QDI------PD-HDVLLAGFPCQPFSQAG 83 +++ PD D++ GFPCQPFS AG Sbjct: 57 EELTNAGISPDSIDIVSGGFPCQPFSIAG 85 >gi|228478248|ref|ZP_04062856.1| modification methylase Sau3AI [Streptococcus salivarius SK126] gi|228249927|gb|EEK09197.1| modification methylase Sau3AI [Streptococcus salivarius SK126] Length = 424 Score = 94.1 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 11/90 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG-- 54 + + +LF G+GG R+ LE +S++ P + + Y +FP++ Sbjct: 1 MNVLELFAGVGGFRIGLENANPDY-FRTLWSNQWEPSRKSQDAFEVYNYHFPDSENINIS 59 Query: 55 --DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI + ++ + D+++ GFPCQ +S A Sbjct: 60 IADITDEQFAEM-NADMIVGGFPCQDYSVA 88 >gi|229551649|ref|ZP_04440374.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus rhamnosus LMS2-1] gi|229314967|gb|EEN80940.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus rhamnosus LMS2-1] Length = 283 Score = 94.1 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ +LF GIGGI L + +E E Y Q ++P+ +F D+ K+ Sbjct: 1 MRSLELFAGIGGIALAEQMA----GIEVAGLCEYADYPRTILQKHWPDVPLFKDVTKLDR 56 Query: 62 QDI------PD-HDVLLAGFPCQPFSQAG 83 +++ PD D++ GFPCQPFS AG Sbjct: 57 EELTNAGISPDSIDIVSGGFPCQPFSIAG 85 >gi|255692343|ref|ZP_05416018.1| DNA (cytosine-5-)-methyltransferase [Bacteroides finegoldii DSM 17565] gi|260621969|gb|EEX44840.1| DNA (cytosine-5-)-methyltransferase [Bacteroides finegoldii DSM 17565] Length = 297 Score = 94.1 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + +LF GIGG L+ + E + SEI ++ ++ NFP G + +I T Sbjct: 1 MVLLELFSGIGGFSKGLQAAG--YSFEKVYFSEIEKNAIANFKYNFPYAEHIGSVTEIGT 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +I D++ G PCQ FS G Sbjct: 59 AEIGHPDIITFGSPCQNFSSVG 80 >gi|157164649|ref|YP_001466261.1| putative two-component sensor [Campylobacter concisus 13826] gi|112801493|gb|EAT98837.1| modification methylase HphIA (Cytosine-specificmethyltransferase HphIA) (M.HphIA) (M.Hphi(C)) [Campylobacter concisus 13826] Length = 489 Score = 94.1 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 12/88 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAKI 59 I DLFCG GG + +++I+ +++TY N P + I D K+ Sbjct: 117 TIIDLFCGAGGFSYGFSK----MGYNILLANDIDKDALRTYSFNHPEINSSRIINDDVKL 172 Query: 60 KTQDI-----PDHDVLLAGFPCQPFSQA 82 +Q+I D+++ G PCQ FS A Sbjct: 173 ISQNIHKYVNLQVDMIIGGPPCQSFSSA 200 >gi|284928852|ref|YP_003421374.1| DNA-methyltransferase Dcm [cyanobacterium UCYN-A] gi|284809311|gb|ADB95016.1| DNA-methyltransferase Dcm [cyanobacterium UCYN-A] Length = 422 Score = 94.1 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 DLF G+GG+ L EQ + S EI+P + NFP T I DI+ I + Sbjct: 9 IDLFAGVGGMTLGFEQA----GFDVLGSVEIDPIHCAAHHYNFPFWTTICSDISIINAKT 64 Query: 64 I--------PDHDVLLAGFPCQPFSQAG 83 I + DV+ G PCQ FS G Sbjct: 65 IRNLSCIGNREIDVVFGGPPCQGFSLIG 92 >gi|288927044|ref|ZP_06420936.1| site-specific DNA-methyltransferase [Prevotella buccae D17] gi|288336182|gb|EFC74571.1| site-specific DNA-methyltransferase [Prevotella buccae D17] Length = 385 Score = 94.1 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + LF GIG E + + F EI + K + FPN++ + DI K Sbjct: 5 ITHASLFSGIG----APELAAHWMGWKNLFHCEIQEFQRKVLEYWFPNSVSYEDITKTDF 60 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 + D+L GFPCQPFS AG Sbjct: 61 TEWRGKVDILTGGFPCQPFSVAG 83 >gi|325845888|ref|ZP_08169086.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481794|gb|EGC84826.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 434 Score = 94.1 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 16/97 (16%) Query: 2 LKITDLFCGIGGIRLDLEQ----------TFNHRNVECFFSSEINPY-----SVKTYQAN 46 L + +LF G+GG R+ L + + + + ++++ P + + Y Sbjct: 3 LTVVELFAGVGGFRVGLNKVTNFDEKSGKAIENGDWKFLWANQWEPSTKSQPAFECYSKR 62 Query: 47 FPNTLIFG-DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 F ++ DI K+ + IP+H++L+ GFPCQ +S A Sbjct: 63 FNESMNSNIDINKVNKESIPNHNLLVGGFPCQDYSVA 99 >gi|1781029|emb|CAA67412.1| orf1 [Methanopyrus kandleri] Length = 146 Score = 94.1 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 K+ DLFCG GG ++ + E NP TY+ NFP +I DI ++ + Sbjct: 4 KVVDLFCGAGGFSRGFKEA----GFKILGGVENNPAPAATYRENFPEAEVIERDIQRVDS 59 Query: 62 QDIPDH----DVLLAGFPCQPFSQA 82 ++I D DV++ G PC+PF+ A Sbjct: 60 EEIVDELGEPDVIIGGPPCEPFTAA 84 >gi|291519163|emb|CBK74384.1| DNA-methyltransferase (dcm) [Butyrivibrio fibrisolvens 16/4] Length = 406 Score = 93.7 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 15/95 (15%) Query: 1 MLKIT-DLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFG 54 M K +LF G+GG RL E+ + + S+ P ++ Y +F + Sbjct: 1 MQKTICELFAGVGGFRLGFERL--NTGWNTTWFSQWEPEKKNQWAHDCYVEHFGDLPDLQ 58 Query: 55 -------DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI+ I +IPDH++L+ GFPCQ +S A Sbjct: 59 GEFHTGEDISIINKDNIPDHNLLVGGFPCQDYSVA 93 >gi|325564165|gb|ADZ31422.1| M.PsuNI [Pseudomonas stutzeri] Length = 422 Score = 93.7 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI- 59 LF G GG +E + V+ + E++ ++ +TY+ NFP+T +F GD+ Sbjct: 18 YTAVSLFSGCGGFCEGIE----NSGVKVKVAVELDKFACQTYRHNFPSTPLFEGDVHNFL 73 Query: 60 -------KTQDIPDHDVLLAGFPCQPFSQAG 83 + D D++ G PCQ +SQ G Sbjct: 74 ADGSGHEDEYRLQDVDLVFGGPPCQGYSQIG 104 >gi|310830456|ref|YP_003965557.1| Cytosine-specific methyltransferase [Paenibacillus polymyxa SC2] gi|309249923|gb|ADO59489.1| Cytosine-specific methyltransferase [Paenibacillus polymyxa SC2] Length = 156 Score = 93.7 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + DLFCG G + F + + + Y+V TY N N I +I + + Sbjct: 36 LTMIDLFCGAG---IGA-SGFLLAGYKIISAVDNQKYAVDTYNRNIENHAICANIRFLNS 91 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++PD DV+ GFPCQPFS +G Sbjct: 92 NELPDADVISGGFPCQPFSFSG 113 >gi|223937258|ref|ZP_03629164.1| DNA-cytosine methyltransferase [bacterium Ellin514] gi|223894043|gb|EEF60498.1| DNA-cytosine methyltransferase [bacterium Ellin514] Length = 408 Score = 93.7 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 12/91 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--------TLI 52 +L+ +LF G GG+ + L +H + E N ++ +T + N N L Sbjct: 7 ILRSLELFAGAGGLAIGL----HHAGFKPRALVEFNRHACETLRFNADNGFETLNGAKLF 62 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GD+ ++ +I DV+ G PCQPFS G Sbjct: 63 AGDVREVDFAEIDAVDVVTGGPPCQPFSIGG 93 >gi|86750436|ref|YP_486932.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2] gi|86573464|gb|ABD08021.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2] Length = 438 Score = 93.7 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 + DLFCG GG+ S+ +P ++ TY+ANFP I GDI Sbjct: 6 FSVVDLFCGAGGLSQGFRDA----GFRVVAGSDNDPDAMATYRANFPEAAGITGDIRSAP 61 Query: 61 TQD-----IPDHDVLLAGFPCQPFSQ 81 ++ VL+ G PCQ FSQ Sbjct: 62 IKEQLLEAARRATVLIGGPPCQAFSQ 87 >gi|302348094|ref|YP_003815732.1| Cytosine-specific DNA methylase [Acidilobus saccharovorans 345-15] gi|302328506|gb|ADL18701.1| Cytosine-specific DNA methylase [Acidilobus saccharovorans 345-15] Length = 327 Score = 93.7 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 38/85 (44%), Gaps = 13/85 (15%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQD 63 DLF G GG E + E +P KTY+ANFP T LI DI + Sbjct: 3 IDLFSGAGGFSRGFELA----GFNVVAAVENDPPVAKTYKANFPETYLIADDIKDVSEPT 58 Query: 64 IP--------DHDVLLAGFPCQPFS 80 I D DV++A PC+PF+ Sbjct: 59 IKDVSGYGRGDVDVVIASPPCEPFT 83 >gi|251781727|ref|YP_002996029.1| 5-methylcytosine methyltransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390356|dbj|BAH80815.1| 5-methylcytosine methyltransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 422 Score = 93.7 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 11/90 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPN----TLI 52 +KI +LF G+GG R+ LE + ++++ P + + Y +F + + Sbjct: 1 MKILELFAGVGGFRVGLENADKDL-FQTKWANQWEPSRKSQDAFEVYDYHFSDSQNINIS 59 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI + + D D+++ GFPCQ +S A Sbjct: 60 ISDITDEDFEKM-DADMIVGGFPCQDYSVA 88 >gi|237739124|ref|ZP_04569605.1| C-5 cytosine-specific DNA methylase [Fusobacterium sp. 2_1_31] gi|229423724|gb|EEO38771.1| C-5 cytosine-specific DNA methylase [Fusobacterium sp. 2_1_31] Length = 361 Score = 93.7 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 LK +LF G GG+ L +E+ EI+ + T + N PN +I +IA I Sbjct: 29 LKAIELFAGAGGLALGVEKA----GFNTIGLIEIDKNACNTLKLNRPNWNVINENIANIS 84 Query: 61 TQDIPDH--------DVLLAGFPCQPFSQAG 83 +++ D D+L G PCQ FS AG Sbjct: 85 LKNLEDFFSIKKGELDLLSGGAPCQAFSYAG 115 >gi|282901524|ref|ZP_06309446.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii CS-505] gi|281193567|gb|EFA68542.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii CS-505] Length = 436 Score = 93.7 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 14/89 (15%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQ- 62 DLF G GG+ L +E E S EI+P + NFPN I DI+ + ++ Sbjct: 15 IDLFSGAGGLSLGIESA----GFEVVISIEIDPVHSAIHNYNFPNCANICRDISNVSSEE 70 Query: 63 --------DIPDHDVLLAGFPCQPFSQAG 83 DI + D+L G PCQ FSQ G Sbjct: 71 LWNILNDKDINEVDLLAGGPPCQGFSQMG 99 >gi|317489194|ref|ZP_07947712.1| C-5 cytosine-specific DNA methylase [Eggerthella sp. 1_3_56FAA] gi|325832321|ref|ZP_08165320.1| DNA (cytosine-5-)-methyltransferase [Eggerthella sp. HGA1] gi|316911702|gb|EFV33293.1| C-5 cytosine-specific DNA methylase [Eggerthella sp. 1_3_56FAA] gi|325486157|gb|EGC88611.1| DNA (cytosine-5-)-methyltransferase [Eggerthella sp. HGA1] Length = 447 Score = 93.7 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF GI + E SEI+P+ FP+ GDI+K++ Sbjct: 1 MRYVSLFSGI----EAASCAWGPLGWEAVAFSEIDPFCNAVLATRFPSVPNLGDISKVEW 56 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 +++ + DV++ G PCQ FS AG Sbjct: 57 KEMRGEIDVVIGGSPCQSFSVAG 79 >gi|238917713|ref|YP_002931230.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC 27750] gi|238873073|gb|ACR72783.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC 27750] Length = 477 Score = 93.7 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 13/90 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57 LK+ DLFCG GG+ L Q +++I V TY N P + ++ GDI Sbjct: 102 LKMLDLFCGAGGLSLGFTQ----EGFVTSLANDIQDCCVDTYAHNHPETPRDHIVLGDIK 157 Query: 58 KI--KTQDI---PDHDVLLAGFPCQPFSQA 82 + ++ + D+++ G PCQ FS A Sbjct: 158 DVVKNLDELLAGRNVDIVVGGPPCQGFSMA 187 >gi|127429|sp|P06530|MTBR_BACSU RecName: Full=Modification methylase BsuRI; Short=M.BsuRI; AltName: Full=Cytosine-specific methyltransferase BsuRI gi|40247|emb|CAA26731.1| unnamed protein product [Bacillus subtilis] Length = 436 Score = 93.7 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 28/108 (25%) Query: 2 LKITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINP 37 + + LF G GG+ L E N +++++ Sbjct: 59 INVLSLFSGCGGLDLGFELAGLAAVIGEQAAMEAFKDKDRFNELRNKSIFHTIYTNDLFK 118 Query: 38 YSVKTYQANFPNTLIFG--DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + +TY+ NFP +I DI ++K P +++L GFPC FS+AG Sbjct: 119 EANQTYKTNFPGHVIQHEKDIRQVKY--FPKCNLILGGFPCPGFSEAG 164 >gi|15920534|ref|NP_376203.1| modification methylase [Sulfolobus tokodaii str. 7] gi|15621317|dbj|BAB65312.1| 322aa long hypothetical modification methylase [Sulfolobus tokodaii str. 7] Length = 322 Score = 93.7 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQ 62 + DLF G GG L ++ + F+ +IN + +TY NFP TL I DI I + Sbjct: 5 VVDLFSGAGGFSLGFKK----LGFDIRFAIDINHAAARTYATNFPTTLVIEDDIRNITGR 60 Query: 63 DI-----PDHDVLLAGFPCQPFSQA 82 DI D+++ PC+P++ A Sbjct: 61 DIEYLIGRKVDIVIGSPPCEPYTGA 85 >gi|325979448|ref|YP_004289164.1| DNA (cytosine-5-)-methyltransferase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325179376|emb|CBZ49420.1| DNA (cytosine-5-)-methyltransferase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 333 Score = 93.3 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +K +LF G GG+ L +E+ E E + + +T + N PN +I D+A I Sbjct: 1 MKSIELFAGAGGLALGIEKA----GFETIGLIEFDSAAAETLKYNRPNWNVIHDDVANIS 56 Query: 61 TQDIPDH--------DVLLAGFPCQPFSQAG 83 D+ D+ D+L G PCQ FS AG Sbjct: 57 KLDLEDYFSIRKGELDLLSGGAPCQSFSYAG 87 >gi|283796860|ref|ZP_06346013.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. M62/1] gi|291075266|gb|EFE12630.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. M62/1] Length = 547 Score = 93.3 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G GG L + + ++SEI P+ + NFP GDI K+ Sbjct: 5 ITMGSLFSGSGGFEL----AGSIFGIRPIWASEIEPFPILVTTKNFPEMKHLGDINKLNG 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+ ++ G PCQ S AG Sbjct: 61 ADLEPVTIIAGGSPCQDMSIAG 82 >gi|209524941|ref|ZP_03273486.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209494590|gb|EDZ94900.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 442 Score = 93.3 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-----NTLIFGDI 56 DLF GIGG R+ LE + +C SEI S++ Y+ NF + GD+ Sbjct: 15 FTFVDLFSGIGGFRIALE----NWGGKCLGYSEIAANSIQVYKQNFIRDANLDEPNLGDM 70 Query: 57 AKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 + +P D++ G PCQP+S AG Sbjct: 71 RSL--HKLPFTVDLITGGVPCQPWSIAG 96 >gi|291007577|ref|ZP_06565550.1| DNA-cytosine methyltransferase [Saccharopolyspora erythraea NRRL 2338] Length = 418 Score = 93.3 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 15/97 (15%) Query: 2 LKITDLFCGIGGIRLDLEQ----TFNHRNVECFFSSEINPYSVKTYQANF-----PNTLI 52 + + DLF G GG + + E + + TY ANF I Sbjct: 8 INMIDLFAGCGGFTQGFREFRPPGGTTSPFRTVGAVEWDIAAASTYAANFAEEAGGTDHI 67 Query: 53 F-----GDIAKIKTQDIPD-HDVLLAGFPCQPFSQAG 83 + GDI I D DV+L G PCQ FS G Sbjct: 68 YAGREDGDIIHWNPGQIKDDVDVILGGPPCQGFSSLG 104 >gi|632681|gb|AAB31678.1| DNA (cytosine-5)-methyltransferase, m5C-MTase {BspRI restriction-modification system} [Escherichia coli, Peptide, 424 aa] Length = 424 Score = 93.3 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 28/108 (25%) Query: 2 LKITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINP 37 + LFCG GG+ L E + ++++I Sbjct: 58 FNVLSLFCGAGGLDLGFELAGLEQSLGTDKALEAFKDRDVYNAIRHESVFHTVYANDIFS 117 Query: 38 YSVKTYQANFPNT--LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +++TY+ N PN + DI KIK + P ++++ GFPC FS+AG Sbjct: 118 EALQTYEKNMPNHVFIHEKDIRKIK--EFPSANLVIGGFPCPGFSEAG 163 >gi|328914001|gb|AEB65597.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens LL3] Length = 600 Score = 93.3 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 19/97 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLI 52 K+ DLF G GG+ EQT E + EIN +++TY N P+ Sbjct: 11 FKLVDLFAGAGGLSKGFEQTGC---FETIGAVEINQAAIETYVYNHGGNRDIIIRPDESD 67 Query: 53 FGDIAKIKTQDIPD---HD----VLLAGFPCQPFSQA 82 DI+KI + D ++ G PCQ FS A Sbjct: 68 TSDISKIDFRKWKKSKNIDPNLLTIIGGPPCQGFSNA 104 >gi|255279956|ref|ZP_05344511.1| modification methylase AgeI [Bryantella formatexigens DSM 14469] gi|255269729|gb|EET62934.1| modification methylase AgeI [Bryantella formatexigens DSM 14469] Length = 475 Score = 93.3 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 13/89 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAK 58 ++ DLFCG GG+ L Q +++I V TY N P +I GDI Sbjct: 103 RLVDLFCGAGGLSLGFVQ----EGFAVSLANDIEECCVDTYAHNHPEVPESHIIRGDIHD 158 Query: 59 I--KTQDI---PDHDVLLAGFPCQPFSQA 82 + + D+ D+++ G PCQ FS A Sbjct: 159 VAGELDDLLADRRVDIVIGGPPCQGFSMA 187 >gi|308175642|ref|YP_003922347.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens DSM 7] gi|307608506|emb|CBI44877.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens DSM 7] gi|328555623|gb|AEB26115.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens TA208] Length = 597 Score = 93.3 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 19/97 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLI 52 K+ DLF G GG+ EQT E + EIN +++TY N P+ Sbjct: 8 FKLVDLFAGAGGLSKGFEQTGC---FETIGAVEINQAAIETYVYNHGGNRDIIIRPDESD 64 Query: 53 FGDIAKIKTQDIPD---HD----VLLAGFPCQPFSQA 82 DI+KI + D ++ G PCQ FS A Sbjct: 65 TSDISKIDFRKWKKSKNIDPNLLTIIGGPPCQGFSNA 101 >gi|298286911|sp|P13906|MTB1_BACSH RecName: Full=Modification methylase BspRI; Short=M.BspRI; AltName: Full=Cytosine-specific methyltransferase BspRI gi|258593908|emb|CAA33764.2| DNA(cytosine-5)methyltransferase [Lysinibacillus sphaericus] Length = 424 Score = 93.3 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 28/108 (25%) Query: 2 LKITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINP 37 + LFCG GG+ L E + ++++I Sbjct: 58 FNVLSLFCGAGGLDLGFELAGLEQSLGTDKALEAFKDRDVYNAIRHESVFHTVYANDIFS 117 Query: 38 YSVKTYQANFPNT--LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +++TY+ N PN + DI KIK + P ++++ GFPC FS+AG Sbjct: 118 EALQTYEKNMPNHVFIHEKDIRKIK--EFPSANLVIGGFPCPGFSEAG 163 >gi|283783021|ref|YP_003373775.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05] gi|283441534|gb|ADB14000.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05] Length = 357 Score = 93.3 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 10/87 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 + DLF G+GG+ L E+ ++E + Y N T ++ GDI + Sbjct: 4 TVIDLFSGVGGLSLGFEE----EGFSVLLANEYDESIANAYMKNHKTTKMVVGDITSLDL 59 Query: 62 QDI-----PDHDVLLAGFPCQPFSQAG 83 + DV++ G PCQ FSQ G Sbjct: 60 DAVFGTYKNKIDVIIGGPPCQGFSQKG 86 >gi|218244975|ref|YP_002370346.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] gi|218165453|gb|ACK64190.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801] Length = 423 Score = 93.3 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L + +LF G GG+ L LE ++ EI+ V T Q N P I D+ KI Sbjct: 73 LSVIELFAGCGGMALGLENA----GLKTELLVEIDRDCVNTLQKNRPYWPILQEDVTKID 128 Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83 + D++ GFPCQ FS AG Sbjct: 129 FRSYQGKIDIVSGGFPCQAFSYAG 152 >gi|228918462|ref|ZP_04081908.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228949261|ref|ZP_04111525.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810387|gb|EEM56744.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228841185|gb|EEM86381.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 413 Score = 93.3 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 12/91 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF-- 53 M+ + +LF G+GG R+ LE+ + + + ++ P + Y F + I Sbjct: 1 MINVIELFAGVGGFRIGLEKIGH---FQIVWGNQWEPSKKAQDAFHCYAQRFQDKGIHCN 57 Query: 54 GDIAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 DIA + ++I + ++++ GFPCQ +S A Sbjct: 58 QDIATVTDEEIQKIEAEMIVGGFPCQDYSVA 88 >gi|332796494|ref|YP_004457994.1| DNA-cytosine methyltransferase [Acidianus hospitalis W1] gi|332694229|gb|AEE93696.1| DNA-cytosine methyltransferase [Acidianus hospitalis W1] Length = 323 Score = 93.3 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 LK+ DLF G GG L ++ + +IN + + Y NFP+T++ DI + Sbjct: 3 LKVVDLFSGAGGFSLGF----KNQGFNIALAIDINHAAARAYAQNFPSTVVLEEDIRNVT 58 Query: 61 TQDIPDH-----DVLLAGFPCQPFSQA 82 ++I D D+L+ PC+ F+ A Sbjct: 59 GEEIIDILGSSPDILIGSPPCEGFTAA 85 >gi|313665643|ref|YP_004047514.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma leachii PG50] gi|312949997|gb|ADR24593.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma leachii PG50] Length = 327 Score = 92.9 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 10/87 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 I DLF G GG+ L Q N E + E +V TY NF + DI + + Sbjct: 8 TIIDLFAGAGGLTLGFTQ----NNFEILDTVEFWQPAVDTYNYNFKKNITVKDITNLNVR 63 Query: 63 D------IPDHDVLLAGFPCQPFSQAG 83 D+++ GFPCQ FS AG Sbjct: 64 QCLQDNYKSKTDLVIGGFPCQGFSMAG 90 >gi|289167263|ref|YP_003445530.1| type II DNA modification enzyme (methyltransferase cytosine-specific) [Streptococcus mitis B6] gi|288906828|emb|CBJ21662.1| type II DNA modification enzyme (methyltransferase cytosine-specific) [Streptococcus mitis B6] Length = 387 Score = 92.9 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 14/97 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNH------RNVECFFSSEINPYSVKTYQANFPN-TLIF 53 M+++ DLF G GG+ + T + + F++E N + + ++ N+P T+I Sbjct: 1 MIEVVDLFSGAGGLTFGFQNTIKNNKFVSRNDFNIRFANEFNHDAAEAFRQNYPGVTMIE 60 Query: 54 GDIAKIKTQDIPD-------HDVLLAGFPCQPFSQAG 83 DIA I + D+++ G PCQ FS G Sbjct: 61 EDIANIDEHFLKSKGISSKRVDLVIGGPPCQSFSTVG 97 >gi|310815203|ref|YP_003963167.1| modification methylase XorII [Ketogulonicigenium vulgare Y25] gi|308753938|gb|ADO41867.1| modification methylase XorII [Ketogulonicigenium vulgare Y25] Length = 437 Score = 92.9 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQD 63 DLF G GG+ L EQ + + EI+P ++ NFP+ + + + +D Sbjct: 7 IDLFSGAGGMSLGFEQA----GFDVVAAVEIDPVHAAVHKFNFPDCAVIPRSVTDVSGED 62 Query: 64 IP--------DHDVLLAGFPCQPFSQAG 83 I DV+ G PCQ FS G Sbjct: 63 IRAEAGIGDQTVDVVFGGAPCQGFSLIG 90 >gi|153868905|ref|ZP_01998633.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] gi|152074513|gb|EDN71359.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] Length = 418 Score = 92.9 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 13/87 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + DLF G GG+ LE F++EI P TY+ N PNT L+ GD+ ++ Sbjct: 33 LVDLFAGAGGLSCGLEMA----GFHPLFANEIEPVYANTYKHNHPNTDLVIGDVRQMCAS 88 Query: 63 DIP--------DHDVLLAGFPCQPFSQ 81 + + D+L G PCQ FS Sbjct: 89 TLRERLGVKQGEIDLLAGGPPCQGFSI 115 >gi|186686332|ref|YP_001869528.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] gi|186468784|gb|ACC84585.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] Length = 331 Score = 92.9 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 L++ DLF G GG+ L + + + ++ YQ NF + + D+ + Sbjct: 14 LRVVDLFAGCGGLSLGFQNA----GFNIVAAFDNWKPAIDVYQKNFSHEIFDYDLNNLRK 69 Query: 60 KTQDIPDH--DVLLAGFPCQPFSQAG 83 Q + ++++ G PCQ FS AG Sbjct: 70 NYQIFREICPEIIIGGPPCQDFSSAG 95 >gi|18313899|ref|NP_560566.1| C-5 cytosine-specific DNA methylase [Pyrobaculum aerophilum str. IM2] gi|18161467|gb|AAL64748.1| C-5 cytosine-specific DNA methylase [Pyrobaculum aerophilum str. IM2] Length = 463 Score = 92.9 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 18/95 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------------- 47 ++ LF G GG+ L + + + F++++N Y+ TY NF Sbjct: 4 FRVVSLFSGAGGLDLGFKMSGM---YQIIFANDVNLYATTTYAKNFEMKLLKCGGLTEAE 60 Query: 48 PNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQ 81 PN ++ D+ K+ + + DV++ G PCQ FS Sbjct: 61 PNVVLSCDVEKVLFSPLAGEADVVVGGPPCQDFSI 95 >gi|308229522|gb|ADO24174.1| M.AclI [Acinetobacter calcoaceticus] Length = 458 Score = 92.9 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 LK LF G GG+ L V E + + + Y+ NF +T DI + Sbjct: 121 LKAISLFSGCGGLCLGFSAA----GVRIAGFIEKDKHISQIYRDNFSSTPQLANDITSLS 176 Query: 61 TQDIP-------DHDVLLAGFPCQPFSQAG 83 +DI + D+++ G PCQ FS +G Sbjct: 177 HKDIEQYKDSIGEIDIVIGGPPCQGFSLSG 206 >gi|323650463|gb|ADX97312.1| M.FspI [Fischerella muscicola SAG 1427-1] Length = 385 Score = 92.9 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 13/88 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 K+ DLF G GG+ E + +++ + TY+ N+PNT +I DI KI Sbjct: 4 KVIDLFAGAGGLTTGFHMA----GFESLCAIDVDAKPLATYKHNYPNTKIIHQDIRKINP 59 Query: 62 QDIP--------DHDVLLAGFPCQPFSQ 81 D+ + L+ G PCQ FS+ Sbjct: 60 SDLRLALGLQREELTALIGGPPCQGFSR 87 >gi|296329951|ref|ZP_06872435.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676676|ref|YP_003868348.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. spizizenii str. W23] gi|296152990|gb|EFG93855.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414920|gb|ADM40039.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp. spizizenii str. W23] Length = 488 Score = 92.9 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFN-HRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKI 59 L++ DLF G GG Q + + E + EIN + T + + +I GDI Sbjct: 5 LRVLDLFAGGGGFSTGFLQANHPNLKFEIIRAVEINQAASDTLRGHLGSEKVIQGDITNS 64 Query: 60 KTQ-DI----PDHDVLLAGFPCQPFSQAG 83 + +I D DV++ G PCQ FS AG Sbjct: 65 DVKKEIFQSCGDIDVVIGGPPCQTFSLAG 93 >gi|197105892|ref|YP_002131269.1| DNA (cytosine-5-)-methyltransferase protein [Phenylobacterium zucineum HLK1] gi|196479312|gb|ACG78840.1| DNA (cytosine-5-)-methyltransferase protein [Phenylobacterium zucineum HLK1] Length = 508 Score = 92.9 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 18/95 (18%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFG---DIAK 58 ++ DLF G GG+ L + + + + E +P + ++ ANF P G DI + Sbjct: 34 RVLDLFSGCGGLSLGF----HAQGFDIVAAVEFDPAAAASHGANFHPEDPRHGRPRDITR 89 Query: 59 IKTQDIP----------DHDVLLAGFPCQPFSQAG 83 + + + DVL+ G PCQ F++ G Sbjct: 90 LTPEQLALELDLGPVEQAVDVLVGGPPCQAFARVG 124 >gi|323968851|gb|EGB64187.1| DNA-cytosine methyltransferase [Escherichia coli TA007] Length = 282 Score = 92.9 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 1/53 (1%) Query: 31 FSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 FSSE + ++ KTY AN+ + GDI KI +DIPDH++L+ GFPC FSQAG Sbjct: 1 FSSEWDKFAQKTYHANYGD-FPDGDITKIDEKDIPDHEILVGGFPCVAFSQAG 52 >gi|332668060|ref|YP_004450848.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM 1100] gi|332336874|gb|AEE53975.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM 1100] Length = 395 Score = 92.9 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 7/82 (8%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAKIKT 61 + F GIG +RL LEQ E ++++I+P K YQ +F N GDI ++ Sbjct: 14 AEFFAGIGLMRLGLEQA----GWEITYANDIDPIKDKIYQNHFQDPQNHFQLGDIHQLDV 69 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++IP + A FPC S AG Sbjct: 70 KEIPYVTLATASFPCTDLSLAG 91 >gi|331091171|ref|ZP_08340013.1| hypothetical protein HMPREF9477_00656 [Lachnospiraceae bacterium 2_1_46FAA] gi|330405393|gb|EGG84929.1| hypothetical protein HMPREF9477_00656 [Lachnospiraceae bacterium 2_1_46FAA] Length = 375 Score = 92.5 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 DL GIGG+R E T N ++EI+ Y+ TYQ + + D+ + Sbjct: 3 FTTIDLCAGIGGMRKGFELTGYFHN---VLAAEIDKYACMTYQHLYGDDANH-DLTSEEF 58 Query: 62 Q---DIPDHDVLLAGFPCQPFSQAG 83 + D +DVLLAGFPCQ FS+AG Sbjct: 59 KAELDTIQYDVLLAGFPCQTFSKAG 83 >gi|29028380|gb|AAO64731.1| EcoT38I methyltransferase [Escherichia coli] Length = 363 Score = 92.5 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 6/81 (7%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI--KTQ 62 LF G GG+ + ++++I+ + T++ N + + GDI ++ + Sbjct: 7 VSLFTGAGGMDVGFSNA----GFRTVWANDIDKDACDTFKLNHESPVFCGDIDEMLSELS 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + + + G PCQ FS AG Sbjct: 63 GLKNIGCVFGGPPCQGFSVAG 83 >gi|186683285|ref|YP_001866481.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] gi|186465737|gb|ACC81538.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] Length = 419 Score = 92.5 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 17/92 (18%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 LF G+GG L + E + + NP ++ TYQ NFP+ T++ DI ++ ++ Sbjct: 12 VSLFSGVGGFDLGFKAA----GFEIAIAIDNNPIALATYQHNFPHATVLCKDIREVTGEE 67 Query: 64 IP------------DHDVLLAGFPCQPFSQAG 83 I + + G PCQ FS AG Sbjct: 68 IRACIQAKYGDWDGEIHTVFDGPPCQGFSVAG 99 >gi|261415336|ref|YP_003249019.1| DNA-cytosine methyltransferase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371792|gb|ACX74537.1| DNA-cytosine methyltransferase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326638|gb|ADL25839.1| cytosine specific DNA methyltransferase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 418 Score = 92.5 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 F G G+ + L + ++ +SEI P + +T N PN + GDI+ +DI Sbjct: 24 LSFFSGAMGLDIGLSKA----GIKVLLASEIEPNARRTILTNEPNIGLIGDISDYSAEDI 79 Query: 65 P---------DHDVLLAGFPCQPFSQAG 83 + DV++ G PCQ FS AG Sbjct: 80 RKYANLPKNQEIDVMVGGPPCQAFSTAG 107 >gi|163761361|ref|ZP_02168435.1| C-5 cytosine-specific DNA methylase family protein [Hoeflea phototrophica DFL-43] gi|162281356|gb|EDQ31653.1| C-5 cytosine-specific DNA methylase family protein [Hoeflea phototrophica DFL-43] Length = 376 Score = 92.5 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 18/93 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------NTLIFG- 54 LK+ DLF G GG L + E F+ E + + T++ N N +++ Sbjct: 3 LKVVDLFAGAGGFSLAAVRA----GCEIVFAVEFDKNAATTFRNNIGADHRSKNVVVYNR 58 Query: 55 DIAKIKT-----QDIP--DHDVLLAGFPCQPFS 80 DI + + P D D+LL G PCQ FS Sbjct: 59 DITSLSASALAKKHFPASDCDLLLGGPPCQGFS 91 >gi|258593909|emb|CAA33765.2| DNA(cytosine-5)methyltransferase [Lysinibacillus sphaericus] Length = 396 Score = 92.5 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 28/108 (25%) Query: 2 LKITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINP 37 + LFCG GG+ L E + ++++I Sbjct: 30 FNVLSLFCGAGGLDLGFELAGLEQSLGTDKALEAFKDRDVYNAIRHESVFHTVYANDIFS 89 Query: 38 YSVKTYQANFPNT--LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +++TY+ N PN + DI KIK + P ++++ GFPC FS+AG Sbjct: 90 EALQTYEKNMPNHVFIHEKDIRKIK--EFPSANLVIGGFPCPGFSEAG 135 >gi|127453|sp|P25267|MTG1_HERAU RecName: Full=Modification methylase HgiGI; Short=M.HgiGI; AltName: Full=Cytosine-specific methyltransferase HgiGI gi|43475|emb|CAA38947.1| methyltransferase [Herpetosiphon aurantiacus] Length = 126 Score = 92.5 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF G GG+ L Q E + + ++ TYQ NF + + D+A++ Sbjct: 1 MKTIDLFAGCGGMSLGFMQA----GFEIVAAVDNWRPAITTYQQNFIHPIHELDLAEVDE 56 Query: 62 Q----DIPDHDVLLAGFPCQPFSQAG 83 ++++ G PCQ FS AG Sbjct: 57 AISLIKTYSPELIIGGPPCQDFSSAG 82 >gi|282897137|ref|ZP_06305139.1| C-5 cytosine-specific DNA methylase [Raphidiopsis brookii D9] gi|281197789|gb|EFA72683.1| C-5 cytosine-specific DNA methylase [Raphidiopsis brookii D9] Length = 435 Score = 92.5 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 14/89 (15%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQD 63 DLF G GG+ L +E E S EI+P + NFPN I DI+ + +++ Sbjct: 15 IDLFSGAGGLSLGIESA----GFEVVISIEIDPVHSAIHNYNFPNCANICRDISNVSSEE 70 Query: 64 ---------IPDHDVLLAGFPCQPFSQAG 83 I + D+L G PCQ FSQ G Sbjct: 71 LWNILNDKHINEVDLLAGGPPCQGFSQMG 99 >gi|282598683|ref|YP_003358780.1| gp77 [Mycobacterium phage Peaches] gi|255928210|gb|ACU41828.1| gp77 [Mycobacterium phage Peaches] gi|302858592|gb|ADL71338.1| gp78 [Mycobacterium phage Eagle] Length = 177 Score = 92.5 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 +I LF G GG+ L +E+ F + + E+ + F GD++K+ Sbjct: 6 RIGSLFSGAGGLDLAVEEVF---GGQTIWQVEVEKAAATLLAKRFG-VPNLGDVSKVNWH 61 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 ++P D+L GFPCQ S AG Sbjct: 62 EVPAVDILCGGFPCQDVSPAG 82 >gi|332706962|ref|ZP_08427022.1| DNA-methyltransferase [Lyngbya majuscula 3L] gi|332354227|gb|EGJ33707.1| DNA-methyltransferase [Lyngbya majuscula 3L] Length = 450 Score = 92.5 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 15/94 (15%) Query: 1 MLKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIA 57 ++K LFCG GG L +Q ++++ + +V+TY+ NF +L DI Sbjct: 25 LMKHTAISLFCGAGGCSLGFKQA----GYSIVYANDKDAAAVETYRINFTESLCSNEDID 80 Query: 58 KIKT----QDI----PDHDVLLAGFPCQPFSQAG 83 + +I + D+L+ G PCQ FS AG Sbjct: 81 NLDFGQVLSEIVMKPGELDILIGGPPCQGFSTAG 114 >gi|296392544|ref|YP_003657428.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985] gi|296179691|gb|ADG96597.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985] Length = 314 Score = 92.5 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 12/88 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAKI 59 ++ DLF G GG+ L E E + + P ++ Y+ NF + L GD+ + Sbjct: 11 RLLDLFAGCGGLSLGFESA----GFEVALAVDNWPEALAVYRRNFRHRAVELDLGDV-DL 65 Query: 60 KTQDIPDH----DVLLAGFPCQPFSQAG 83 + + + D ++ G PCQ FS AG Sbjct: 66 ASSALRECAAEVDGIIGGPPCQDFSSAG 93 >gi|197301928|ref|ZP_03166992.1| hypothetical protein RUMLAC_00650 [Ruminococcus lactaris ATCC 29176] gi|197298996|gb|EDY33532.1| hypothetical protein RUMLAC_00650 [Ruminococcus lactaris ATCC 29176] Length = 134 Score = 92.5 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 13/92 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M +LF G GG+ L +E+ + +E N + T + N PN +I GD+A+I Sbjct: 1 MFTTIELFAGAGGLALGIEKA----GFKTLALNEFNADACATLRKNRPNWNVIEGDVAEI 56 Query: 60 KTQDIPDH--------DVLLAGFPCQPFSQAG 83 D+ ++ D+L G PCQ FS AG Sbjct: 57 SGLDLEEYFSVRKGELDLLSGGAPCQAFSYAG 88 >gi|308814119|ref|XP_003084365.1| possible site-specific DNA-methyltransferase (ISS) [Ostreococcus tauri] gi|116056249|emb|CAL58430.1| possible site-specific DNA-methyltransferase (ISS) [Ostreococcus tauri] Length = 625 Score = 92.5 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF GIGG + LE+ + E +P + + FP+ + D+A++ Sbjct: 4 LRVASLFAGIGGFDVGLERAGH----RVVLQVEKDPRCRRVLKRRFPDVALVRDVAEVLP 59 Query: 62 QDIPDHDVLLAGFPCQPFS 80 + D+L+AGFPC S Sbjct: 60 HALDGVDLLVAGFPCNDCS 78 >gi|170077471|ref|YP_001734109.1| site-specific DNA-methyltransferase [Synechococcus sp. PCC 7002] gi|169885140|gb|ACA98853.1| site-specific DNA-methyltransferase [Synechococcus sp. PCC 7002] Length = 413 Score = 92.5 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 16/91 (17%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQD 63 DLF G GG+ L LE + + EI+P ++ NFP DI ++ + Sbjct: 8 IDLFAGCGGMSLGLEAA----GFDVVAAVEIDPVHALVHEVNFPYGVTFCRDIRHLQWPE 63 Query: 64 IP-----------DHDVLLAGFPCQPFSQAG 83 + D D+L G PCQ FS G Sbjct: 64 MRQAIERRGYSTADIDLLTGGPPCQGFSVMG 94 >gi|317127844|ref|YP_004094126.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] gi|315472792|gb|ADU29395.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] Length = 360 Score = 92.5 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 13/91 (14%) Query: 1 ML-KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAK 58 M+ ++ DLF G GGI + + NP +V+T+ NF N+ I DI + Sbjct: 1 MIPRVIDLFSGCGGISEGFRLA----GFDILGGLDFNPDAVETFHQNFLNSRAICADIQE 56 Query: 59 IKTQDI-------PDHDVLLAGFPCQPFSQA 82 IK +I D DV++ G PCQ FS A Sbjct: 57 IKNDEITYMFDLTGDIDVIVGGPPCQGFSSA 87 >gi|240143787|ref|ZP_04742388.1| Phi-3T prophage-derived modification methylase Phi3TI [Roseburia intestinalis L1-82] gi|257204222|gb|EEV02507.1| Phi-3T prophage-derived modification methylase Phi3TI [Roseburia intestinalis L1-82] Length = 333 Score = 92.1 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 D FCG GG+ + + + + + Y+V++Y N + + DI ++ QD+P Sbjct: 7 DFFCGCGGMGVGFLNA----GYKIAGAWDFDKYAVQSYDHNVGHHVKQADIKEMTWQDVP 62 Query: 66 DHDVLLAGFPCQPFSQAG 83 V GFPCQ S AG Sbjct: 63 FAHVWAFGFPCQDLSVAG 80 >gi|239624756|ref|ZP_04667787.1| DNA-cytosine methyltransferase [Clostridiales bacterium 1_7_47_FAA] gi|239521142|gb|EEQ61008.1| DNA-cytosine methyltransferase [Clostridiales bacterium 1_7_47FAA] Length = 420 Score = 92.1 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPN--TLIFGD 55 + +LF G+GG RL L+ + E + S+ P ++ Y ++ + D Sbjct: 4 TVCELFAGVGGFRLGLQHS--SPQWETVWFSQWEPGRKKQWAHDCYVKHWGDIDERTGQD 61 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 IA + IPDH +L+ GFPCQ +S A Sbjct: 62 IASVDKTAIPDHTLLVGGFPCQNYSVA 88 >gi|91205699|ref|YP_538054.1| cytosine-C5 specific DNA methylase-like protein [Rickettsia bellii RML369-C] gi|91069243|gb|ABE04965.1| Cytosine-C5 specific DNA methylase-like protein [Rickettsia bellii RML369-C] Length = 147 Score = 92.1 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 25/107 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFN-----------------------HRNVECFFSSEINPY 38 +K+ LF G GG+ L E FN E F ++I Sbjct: 31 IKVISLFSGCGGLDLGFEGNFNIHESCIKDDDFIKSKNGNTVILKDNPFEIVFCNDIMQE 90 Query: 39 SVKTYQANFPNTLIFG--DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + ++ANF N L + I ++K +P D+++ GFPCQ FS AG Sbjct: 91 AKVAWEANFSNKLEYSTKSIRELKGYLLPKADLVIGGFPCQDFSLAG 137 >gi|294782269|ref|ZP_06747595.1| modification methylase Sau3AI [Fusobacterium sp. 1_1_41FAA] gi|294480910|gb|EFG28685.1| modification methylase Sau3AI [Fusobacterium sp. 1_1_41FAA] Length = 423 Score = 92.1 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 15/96 (15%) Query: 2 LKITDLFCGIGGIRLDLE---------QTFNHRNVECFFSSEINP-----YSVKTYQANF 47 L + +LF G+GG R+ L + + E ++++ P Y+ Y F Sbjct: 3 LTVIELFAGVGGFRVGLNNIIKIDSQNKAVENGKWEFIWANQFEPSTKAQYAFDCYVTRF 62 Query: 48 PNTLIFG-DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 I DI K+K IP H +L+ GFPCQ +S A Sbjct: 63 GKENISNEDINKVKKNLIPKHSLLVGGFPCQDYSVA 98 >gi|307140960|ref|ZP_07500316.1| DNA-cytosine methyltransferase [Escherichia coli H736] gi|331645014|ref|ZP_08346131.1| DNA cytosine methyltransferase M.NgoMIII [Escherichia coli H736] gi|331035989|gb|EGI08227.1| DNA cytosine methyltransferase M.NgoMIII [Escherichia coli H736] Length = 413 Score = 92.1 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPN----TLIF 53 +K +LF G GG+ + E E E + ++ T + N FP L Sbjct: 12 MKSVELFAGAGGLAMGCEIA----GFEHLAVVEWDKWACDTVRENKKNGFPLLSDWDLFE 67 Query: 54 GDIAKIKTQDIPD-HDVLLAGFPCQPFSQAG 83 GD+ + IP D+L G PCQPFS G Sbjct: 68 GDVREFDWSKIPKGIDLLAGGPPCQPFSIGG 98 >gi|40850587|gb|AAR96017.1| M2.BsaI [Geobacillus stearothermophilus] Length = 381 Score = 92.1 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 17/93 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 DLF G GG+ L + +++I+ +++ TY N N ++ GDI K + Sbjct: 126 FVDLFSGAGGLSLGFLWA----GWKPIIANDIDKWALTTYMNNIHNEVVLGDIRDEKVSE 181 Query: 64 I------------PDHDV-LLAGFPCQPFSQAG 83 PD + +L G PCQ FS AG Sbjct: 182 TIIQKCLIAKKSNPDRPLFVLGGPPCQGFSTAG 214 >gi|319787207|ref|YP_004146682.1| DNA-cytosine methyltransferase [Pseudoxanthomonas suwonensis 11-1] gi|317465719|gb|ADV27451.1| DNA-cytosine methyltransferase [Pseudoxanthomonas suwonensis 11-1] Length = 443 Score = 92.1 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQD 63 DLF G GG+ L EQ + + EI+P + NFP+ + + + Q Sbjct: 7 IDLFAGAGGLSLGFEQA----GFDVVAAVEIDPVHAAVHAYNFPHCAVLPRSVTDLTAQH 62 Query: 64 IPD--------HDVLLAGFPCQPFSQAG 83 I D DV+ G PCQ FS G Sbjct: 63 IRDAAGIGTRKVDVVFGGAPCQGFSLIG 90 >gi|166163613|gb|ABY83631.1| DNA methyltransferase Cfr42I [Citrobacter freundii] Length = 402 Score = 92.1 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPN----TLIF 53 +K +LF G GG+ + E E E + ++ T + N FP L Sbjct: 1 MKSVELFAGAGGLAMGCEIA----GFEHLAVVEWDKWACDTVRENKKSGFPLLSDWDLFE 56 Query: 54 GDIAKIKTQDIPD-HDVLLAGFPCQPFSQAG 83 GD+ + IP D+L G PCQPFS G Sbjct: 57 GDVREFDWSKIPKGIDLLAGGPPCQPFSIGG 87 >gi|197124335|ref|YP_002136286.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K] gi|196174184|gb|ACG75157.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K] Length = 508 Score = 92.1 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 17/94 (18%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGD 55 DLFCG GG L + +I+ + +TY+ NF ++ GD Sbjct: 7 TFIDLFCGAGGFSLGFRAAGALS----LAAVDIDEVAARTYRRNFGKLQPGMAPHVLSGD 62 Query: 56 IAKIKTQDIPDH------DVLLAGFPCQPFSQAG 83 + ++ D+ D+L+ G PCQ FS+ G Sbjct: 63 LGNLEEIDLGSIVHERTLDILIGGPPCQGFSRIG 96 >gi|119485563|ref|ZP_01619838.1| modification methylase [Lyngbya sp. PCC 8106] gi|119456888|gb|EAW38015.1| modification methylase [Lyngbya sp. PCC 8106] Length = 317 Score = 92.1 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ DLF G GG+ L L+Q + + ++K YQ NF + + G++ +++T Sbjct: 1 MRVVDLFAGCGGLSLGLQQA----GFNIVAAFDDWESAIKVYQKNFAHPIFSGNLQEVQT 56 Query: 62 --QDIPDH--DVLLAGFPCQPFSQAG 83 I +V++ G PCQ FS AG Sbjct: 57 AVDLIKPFSPNVIVGGPPCQDFSSAG 82 >gi|327463101|gb|EGF09422.1| modification methylase DdeI [Streptococcus sanguinis SK1] Length = 351 Score = 92.1 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 I DLF G GG+ E + + +++T++ N N ++ GDI I Sbjct: 4 YNIIDLFSGAGGLSYGFEAA----GFNVLLGIDNDEKALETFRKNHKNSKVLCGDITNIS 59 Query: 61 -TQDIP------DHDVLLAGFPCQPFSQAG 83 +DI D+++ G PCQ S +G Sbjct: 60 YEEDIKPIIGEQKVDLIVGGPPCQGMSLSG 89 >gi|331091845|ref|ZP_08340677.1| hypothetical protein HMPREF9477_01320 [Lachnospiraceae bacterium 2_1_46FAA] gi|330402744|gb|EGG82311.1| hypothetical protein HMPREF9477_01320 [Lachnospiraceae bacterium 2_1_46FAA] Length = 410 Score = 92.1 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +LF G GG+ L +E+ E E + + ++ + N PN +I DIA I Sbjct: 77 FTTIELFAGAGGLALGIEKA----GFEPVGLIEFDKDAAESLKTNRPNWRVIHDDIANIS 132 Query: 61 TQDIPDH--------DVLLAGFPCQPFSQAG 83 D+ D+ D+L G PCQ FS AG Sbjct: 133 CLDLEDYFGIKKGELDLLSGGAPCQAFSYAG 163 >gi|254293303|ref|YP_003059326.1| DNA-cytosine methyltransferase [Hirschia baltica ATCC 49814] gi|254041834|gb|ACT58629.1| DNA-cytosine methyltransferase [Hirschia baltica ATCC 49814] Length = 383 Score = 92.1 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%) Query: 3 KITDLFCGIGGIRL-DLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60 ++ + F G GG + LE +F+ C F+++ +P +TY ANF P D+ + Sbjct: 14 RVLEFFAG-GGFAIKGLEDSFH-----CVFANDNDPLKSRTYTANFGPTHFDTSDVWTLD 67 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IP+ ++ A FPCQ S AG Sbjct: 68 ANHIPNAELAWASFPCQDISIAG 90 >gi|110800293|ref|YP_695463.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC 13124] gi|110674940|gb|ABG83927.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC 13124] Length = 407 Score = 92.1 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 12/90 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNT-LIFGDI 56 + +LF G+GG L L + + E ++++ P ++ + Y +FP T + DI Sbjct: 6 TVCELFAGVGGFHLGLSKA--SADWEVLWANQWEPSRKVQHAFECYAKHFPKTNAVNEDI 63 Query: 57 AKIKTQD----IPDHDVLLAGFPCQPFSQA 82 A + +P +++L+ GFPCQ +S A Sbjct: 64 ALVNENPEAFGLPKYNLLVGGFPCQDYSVA 93 >gi|242237482|ref|YP_002985663.1| DNA-cytosine methyltransferase [Dickeya dadantii Ech703] gi|242129539|gb|ACS83841.1| DNA-cytosine methyltransferase [Dickeya dadantii Ech703] Length = 465 Score = 91.7 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 F G G+ L +E+ + + EI+ Y +T N P+ + DI DI Sbjct: 78 LSFFSGAMGLDLGIEKA----GFDIRLACEIDKYCRQTISLNKPDIALLSDINDYSAMDI 133 Query: 65 ---------PDHDVLLAGFPCQPFSQAG 83 D D+++ G PCQ FS AG Sbjct: 134 IKAAKISPDTDIDLVMGGPPCQAFSTAG 161 >gi|16331413|ref|NP_442141.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803] gi|1001584|dbj|BAA10211.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803] Length = 424 Score = 91.7 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 15/90 (16%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQD 63 DLF G GG+ L LE + + E + + NFP I DIA + + Sbjct: 7 IDLFAGCGGMSLGLEAA----GFDIAAAVEFDAVHCLVHHHNFPYGVTICRDIALVSAGE 62 Query: 64 I----------PDHDVLLAGFPCQPFSQAG 83 I D D++ G PCQ FS G Sbjct: 63 ILRKLNNKGYSSDIDLIAGGPPCQGFSLMG 92 >gi|288922732|ref|ZP_06416903.1| C-5 cytosine-specific DNA methylase [Frankia sp. EUN1f] gi|288345909|gb|EFC80267.1| C-5 cytosine-specific DNA methylase [Frankia sp. EUN1f] Length = 174 Score = 91.7 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ L G GG+ L + Q + ++ +P + + ++P+ GDI + Sbjct: 8 LRVGSLCSGYGGLDLAVHQV---IGGRLAWVADPDPGAARILARHWPDVPNHGDITAVDW 64 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + D+L AGFPCQP+S AG Sbjct: 65 TTVEPIDLLTAGFPCQPWSDAG 86 >gi|317473510|ref|ZP_07932802.1| C-5 cytosine-specific DNA methylase [Anaerostipes sp. 3_2_56FAA] gi|316899021|gb|EFV21043.1| C-5 cytosine-specific DNA methylase [Anaerostipes sp. 3_2_56FAA] Length = 385 Score = 91.7 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DLF G GG+ L + + E + K Y+ NF + + D++ +K+ Sbjct: 1 MNTVDLFAGCGGMSLGFQNA----GFNLVAAFEFWDIAAKCYEENFNHPVFKSDLSNVKS 56 Query: 62 --QDIPDH--DVLLAGFPCQPFSQAG 83 + I ++++ G PCQ FS AG Sbjct: 57 AVEQIRRFSPELIIGGPPCQDFSHAG 82 >gi|218135211|ref|ZP_03464015.1| hypothetical protein BACPEC_03116 [Bacteroides pectinophilus ATCC 43243] gi|217990596|gb|EEC56607.1| hypothetical protein BACPEC_03116 [Bacteroides pectinophilus ATCC 43243] Length = 344 Score = 91.7 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 13/92 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M +LF G GG+ L +E+ E + + T + N PN +I DIA I Sbjct: 1 MYTSIELFAGAGGLALGVEKA----GFNTLGLIEFDKDAADTLKKNRPNWNVINDDIANI 56 Query: 60 KTQDIPDH--------DVLLAGFPCQPFSQAG 83 D+ + D+L G PCQ FS AG Sbjct: 57 SCLDLEKYFSIKKGELDLLSGGAPCQAFSYAG 88 >gi|291549830|emb|CBL26092.1| DNA-methyltransferase (dcm) [Ruminococcus torques L2-14] Length = 410 Score = 91.7 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +LF G GG+ L +E+ E E + + ++ + N PN +I DIA I Sbjct: 77 FTTIELFAGAGGLALGIEKA----GFETLGLVEFDKDAAESLKTNRPNWRVIHDDIANIS 132 Query: 61 TQDIPDH--------DVLLAGFPCQPFSQAG 83 D+ ++ D+L G PCQ FS AG Sbjct: 133 CMDLEEYFGIKKGELDLLSGGAPCQAFSYAG 163 >gi|210630924|ref|ZP_03296669.1| hypothetical protein COLSTE_00554 [Collinsella stercoris DSM 13279] gi|210160239|gb|EEA91210.1| hypothetical protein COLSTE_00554 [Collinsella stercoris DSM 13279] Length = 931 Score = 91.7 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 24/105 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH----------RNVECFFSSEINP-------YSVKTYQ 44 +++ +LF G+GG RL LE N ++++ P ++ + Y+ Sbjct: 511 IRVAELFAGVGGFRLGLEGYSNEDRPEFSMPAAGPFVTVWANQWEPQGAPTRQFAARCYE 570 Query: 45 ANFP-NTLIFGDIAKIKTQ------DIPDHDVLLAGFPCQPFSQA 82 F +++ DI + DIPD D+++ GFPCQ +S A Sbjct: 571 ERFGYGSVVNEDIHVVLDAYEAGKIDIPDVDMVVGGFPCQDYSVA 615 >gi|328958689|ref|YP_004376075.1| DNA-methyltransferase [Carnobacterium sp. 17-4] gi|328675013|gb|AEB31059.1| DNA-methyltransferase [Carnobacterium sp. 17-4] Length = 431 Score = 91.7 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTL-IFGD 55 I +LF G+GG R+ E + + ++++ P + + Y ++P ++ I + Sbjct: 5 FNILELFAGVGGFRVGFENSNESM-FKTKWANQWEPAKKSQDAFEVYDYHYPESMNINEN 63 Query: 56 IAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 I +I + D D+++ GFPCQ +S A Sbjct: 64 IEEISDEAFQSMDADIIVGGFPCQDYSVA 92 >gi|119026251|ref|YP_910096.1| modification methylase Sau3AI [Bifidobacterium adolescentis ATCC 15703] gi|118765835|dbj|BAF40014.1| modification methylase Sau3AI [Bifidobacterium adolescentis ATCC 15703] Length = 424 Score = 91.7 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 24/105 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHR----------NVECFFSSEINP-------YSVKTYQ 44 +K+ +LF G+GG RL L+ N + N +++ P ++ + Y+ Sbjct: 5 IKVVELFAGVGGFRLGLDGYSNPKYPDFEMKPAGNFHTVWANNWEPDGRPTKQFAWRCYE 64 Query: 45 ANFPN-TLIFGDIAKIKTQ------DIPDHDVLLAGFPCQPFSQA 82 F + + DIA + Q ++P+ D+L+ GFPCQ +S A Sbjct: 65 KRFGEGSCVNEDIAVVVEQIKNGERELPEFDMLVGGFPCQDYSVA 109 >gi|291528318|emb|CBK93904.1| DNA-methyltransferase (dcm) [Eubacterium rectale M104/1] Length = 344 Score = 91.7 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 13/92 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M +LF G GG+ L +E+ E + + T + N PN +I DIA I Sbjct: 1 MYTSIELFAGAGGLALGVEKA----GFNTLGLIEFDKDAADTLKKNRPNWNVINDDIANI 56 Query: 60 KTQDIPDH--------DVLLAGFPCQPFSQAG 83 D+ + D+L G PCQ FS AG Sbjct: 57 SCLDLEKYFSIKKGELDLLSGGAPCQAFSYAG 88 >gi|312200624|ref|YP_004020685.1| C-5 cytosine-specific DNA methylase [Frankia sp. EuI1c] gi|311231960|gb|ADP84815.1| C-5 cytosine-specific DNA methylase [Frankia sp. EuI1c] Length = 391 Score = 91.7 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ L GIG + L LE+ + E +P+ + ++P D+ Sbjct: 1 MRVLSLCSGIGALDLGLERA----GLTTVGQVERDPFCQRVLARHWPEVPRHDDVLTTTE 56 Query: 62 Q-----DIPDHDVLLAGFPCQPFSQAG 83 D P DV+ GFPCQP S AG Sbjct: 57 WWTAQPDRPTVDVVAGGFPCQPASVAG 83 >gi|317509458|ref|ZP_07967076.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] gi|316252287|gb|EFV11739.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] Length = 321 Score = 91.7 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 10/87 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDI--- 56 ++ DLF G GG+ L E E + + P ++ Y+ NF + L GD+ Sbjct: 11 RLLDLFSGCGGLSLGFEAA----GFEVAAAVDNWPEALAVYRRNFRHPAIELDLGDVDLA 66 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + ++ D ++ G PCQ FS AG Sbjct: 67 KAVLSEWTAGVDGIIGGPPCQDFSSAG 93 >gi|284052894|ref|ZP_06383104.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] gi|79835469|gb|ABB52095.1| Mod [Arthrospira platensis] gi|291565921|dbj|BAI88193.1| type II DNA modification methyltransferase [Arthrospira platensis NIES-39] Length = 314 Score = 91.7 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 ++ DLF G GG+ L + + + EI ++K YQ NF + + D++K Sbjct: 1 MRTIDLFAGCGGLSLGFQNA----GFDMKAAFEIWKPAIKVYQRNFSHPIFQVDLSKESV 56 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I T +V++ G PCQ FS AG Sbjct: 57 INTLGEWKPEVIIGGPPCQDFSSAG 81 >gi|329767389|ref|ZP_08258914.1| hypothetical protein HMPREF0428_00611 [Gemella haemolysans M341] gi|328836078|gb|EGF85769.1| hypothetical protein HMPREF0428_00611 [Gemella haemolysans M341] Length = 144 Score = 91.4 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + DLF G+GG+ E ++E++ +Y+ N P +I DI+K+ Sbjct: 5 VIDLFSGVGGLSKGF----FDSGFEIVLANEVDYSIANSYKKNHPKVKMINEDISKLDID 60 Query: 63 DI----PDHDVLLAGFPCQPFSQAG 83 D+ + DV++ G PCQ FSQ G Sbjct: 61 DVFNEYKNIDVIVGGPPCQGFSQKG 85 >gi|115345708|ref|YP_771887.1| DNA-cytosine methyltransferase, putative [Roseobacter denitrificans OCh 114] gi|115293028|gb|ABI93479.1| DNA-cytosine methyltransferase, putative [Roseobacter denitrificans OCh 114] Length = 394 Score = 91.4 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 7/82 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M K + F G G R L +C F+++ + TY+ N+ + +I DI I Sbjct: 10 MFKFYEFFAGGGMARAGL-----GEGWKCEFANDFDRKKGATYKKNWGDGEMIVDDIRNI 64 Query: 60 KTQDIPDH-DVLLAGFPCQPFS 80 D+P H D++ FPCQ S Sbjct: 65 GLDDLPGHADLVWGSFPCQDLS 86 >gi|325971313|ref|YP_004247504.1| DNA-cytosine methyltransferase [Spirochaeta sp. Buddy] gi|324026551|gb|ADY13310.1| DNA-cytosine methyltransferase [Spirochaeta sp. Buddy] Length = 516 Score = 91.4 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLF G GG+ + N + E N Y+ +T + N T + D+ + Sbjct: 3 YRVLDLFAGAGGLSQGFKNAG---NFSIAVAIENNKYAQETCRENHKETTMLSDV--LDY 57 Query: 62 QDIPD-------HDVLLAGFPCQPFSQA 82 D D DV++ G PCQ FS A Sbjct: 58 SDFSDFKTKYGEFDVVIGGPPCQGFSNA 85 >gi|213586034|ref|ZP_03367860.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 112 Score = 91.4 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 35/92 (38%), Positives = 43/92 (46%), Gaps = 24/92 (26%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 25 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 80 Query: 58 KIKT----------------QDIPDHDVLLAG 73 I Q IP HDVLLAG Sbjct: 81 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAG 112 >gi|308229532|gb|ADO24181.1| M.ApaI [Acetobacter pasteurianus subsp. pasteurianus] Length = 349 Score = 91.4 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +K DLF G GG+ L + H +E E N +V TY A+ P+ DI I Sbjct: 1 MKALDLFSGPGGLSLGM----KHAGIEPVACVEKNKDAVSTYDAHTPDAEHYCSDIRSIS 56 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 + D++ G PCQPFS G Sbjct: 57 FERYRGLVDIVFGGPPCQPFSTGG 80 >gi|328946815|gb|EGG40952.1| modification methylase DdeI [Streptococcus sanguinis SK1087] Length = 387 Score = 91.4 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 14/97 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNH------RNVECFFSSEINPYSVKTYQANFPN-TLIF 53 M+++ DLF G GG+ + T + + F++E N + + ++ N+P T+I Sbjct: 1 MIEVVDLFSGAGGLTFGFQNTIKNNKFVSRNDFNIRFANEFNHDAAEAFRQNYPRVTMIE 60 Query: 54 GDIAKIKTQDIPD-------HDVLLAGFPCQPFSQAG 83 DIA I + D+++ G PCQ FS G Sbjct: 61 EDIANIDKHFLKSKGISSKRVDLVIGGPPCQSFSTVG 97 >gi|34451616|gb|AAQ72364.1| methylase fusion protein [Geobacillus stearothermophilus] Length = 1007 Score = 91.4 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 12/89 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 K DLFCG GG+ ++ ++ ++I + T + N P ++ GDI++ +T Sbjct: 774 KSIDLFCGAGGLTAGFKEA----GIQSVLCNDIEESACITLKINNPEIKVLCGDISQHET 829 Query: 62 QD------I-PDHDVLLAGFPCQPFSQAG 83 ++ I D D++ G PCQ FS AG Sbjct: 830 KEHIVNVAINEDVDIICGGPPCQGFSMAG 858 >gi|317495998|ref|ZP_07954360.1| DNA-cytosine methyltransferase [Gemella moribillum M424] gi|316913902|gb|EFV35386.1| DNA-cytosine methyltransferase [Gemella moribillum M424] Length = 415 Score = 91.4 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 16/95 (16%) Query: 4 ITDLFCGIGGIRLDLEQ----------TFNHRNVECFFSSEINP-----YSVKTYQANFP 48 + +LF G+GG R+ L ++++ P ++ + Y F Sbjct: 5 VVELFAGVGGFRVGLNNITDFRKKDGCAIEKNGWNFVWANQYEPSTKAQHAFECYSKRFQ 64 Query: 49 -NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI K+ + IP+H +L+ GFPCQ +S A Sbjct: 65 IGECSNEDINKVDKKTIPNHSLLVGGFPCQDYSVA 99 >gi|319639602|ref|ZP_07994349.1| cytosine-specific methyltransferase [Neisseria mucosa C102] gi|317399173|gb|EFV79847.1| cytosine-specific methyltransferase [Neisseria mucosa C102] Length = 327 Score = 91.4 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 25/95 (26%) Query: 2 LKITDLFC----------------GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA 45 LK+ LFC G QT+ E ++ + + ++V+TY A Sbjct: 5 LKVVSLFCGCGGSDLGLLGGFEYLG---------QTYPKLPFEIVYALDFDKFAVQTYNA 55 Query: 46 NFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80 NF + I DI + Q++ D D+LL GFPCQ FS Sbjct: 56 NFEHPAICDDIKNLNIQELDDFDLLLGGFPCQSFS 90 >gi|317127845|ref|YP_004094127.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] gi|315472793|gb|ADU29396.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] Length = 363 Score = 91.4 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 11/88 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIAK 58 KI DLF G+GG L E E + + +++TY N N + D++K Sbjct: 5 KIIDLFSGVGGFSLGFEMA----GYETVLAIDFWKDAIETYNHNRENKVAEVMSIHDLSK 60 Query: 59 IKTQDIP-DHDV--LLAGFPCQPFSQAG 83 + + + DH + ++ G PCQ FS G Sbjct: 61 ERLEKLKSDHTIEGIIGGPPCQGFSTVG 88 >gi|153855943|ref|ZP_01996894.1| hypothetical protein DORLON_02919 [Dorea longicatena DSM 13814] gi|149751791|gb|EDM61722.1| hypothetical protein DORLON_02919 [Dorea longicatena DSM 13814] Length = 433 Score = 91.4 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 15/95 (15%) Query: 1 MLKIT-DLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIF- 53 M K +LF G+GG RL ++ E + S+ P ++ Y ++ + Sbjct: 1 MKKTICELFAGVGGFRLGFDKL--ESGWETTWFSQWEPGKKKQWAHDCYVYHYGDCADLK 58 Query: 54 ------GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI+++ +IP+H++L+ GFPCQ +S A Sbjct: 59 GEFHTGEDISQMNKNNIPNHNLLVGGFPCQDYSVA 93 >gi|67924379|ref|ZP_00517809.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67853772|gb|EAM49101.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 435 Score = 91.4 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 DLF G+GG+ L EQ + S EI+P ++ NFP T I + IK + Sbjct: 9 VDLFAGVGGMTLGFEQA----GFDVLASVEIDPIHCSIHRYNFPFWTTICASVTSIKASE 64 Query: 64 IPD--------HDVLLAGFPCQPFSQAG 83 I + DV+ G PCQ FS G Sbjct: 65 IRELSTIKNKPIDVVFGGPPCQGFSLMG 92 >gi|169826094|ref|YP_001696252.1| modification methylase BsuRI [Lysinibacillus sphaericus C3-41] gi|168990582|gb|ACA38122.1| Modification methylase BsuRI [Lysinibacillus sphaericus C3-41] Length = 426 Score = 91.4 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 28/108 (25%) Query: 2 LKITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINP 37 + LF G GG+ L E + +++++ Sbjct: 59 YNVVGLFSGCGGLDLGFELAGLIAEIGEENAMTAFKNKEKFDEIRHKSVFNTIYTNDMFK 118 Query: 38 YSVKTYQANFPNTLIFG--DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + +TY+ NFP+ +I DI K+ + P +++L GFPC FS+AG Sbjct: 119 EANETYKLNFPDHIIQHEKDIRKV--ANFPMCNLMLGGFPCPGFSEAG 164 >gi|70725582|ref|YP_252496.1| hypothetical protein SH0581 [Staphylococcus haemolyticus JCSC1435] gi|68446306|dbj|BAE03890.1| shlA1M [Staphylococcus haemolyticus JCSC1435] Length = 412 Score = 91.4 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANF-PNTLIFGD 55 LK+ +LF G+GG RL LE T + ++++ P ++ Y + F + D Sbjct: 4 LKVAELFAGVGGFRLGLENTKEKI-FDVTWANQWEPSKKIQHAFDCYNSRFITGEHVNKD 62 Query: 56 IAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 IA I ++I D+++ GFPCQ +S A Sbjct: 63 IALISDEEIANTKADMVVGGFPCQDYSVA 91 >gi|209527695|ref|ZP_03276192.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209491867|gb|EDZ92225.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 314 Score = 91.4 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 ++ DLF G GG+ L E + + EI ++K YQ NF + + D+++ Sbjct: 1 MRTIDLFAGCGGLSLGFENA----GFDIKAAFEIWQPAIKVYQRNFRHPIFQVDLSEESV 56 Query: 61 TQDIPDH--DVLLAGFPCQPFSQAG 83 + ++ +V++ G PCQ FS AG Sbjct: 57 IHTLREYKPEVIIGGPPCQDFSSAG 81 >gi|94990422|ref|YP_598522.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10270] gi|94543930|gb|ABF33978.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10270] Length = 110 Score = 91.0 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL L + EC EI+ ++ ++Y+A + + F DI ++ Sbjct: 4 MKFLDLFAGIGGFRLGLINQCH----ECIGFCEIDKFARQSYKAIYETEGEIEFHDIRQV 59 Query: 60 KTQDIP----DHDVLLAGF 74 QD D++ GF Sbjct: 60 TDQDFRQLRGQVDIICGGF 78 >gi|313678719|ref|YP_004056459.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis PG45] gi|312950602|gb|ADR25197.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis PG45] Length = 324 Score = 91.0 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 10/86 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA------ 57 I DLF G GG+ L Q N + + E +V TY NF ++ DI Sbjct: 6 IIDLFAGAGGLTLGFTQ----NNFDILDTIEFWQPAVDTYNFNFKKNVVAKDITDSEVRN 61 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++++ D+++ GFPCQ FS AG Sbjct: 62 ELESNWKNKTDLVIGGFPCQGFSLAG 87 >gi|306817606|ref|ZP_07451349.1| modification methylase Eco47II [Mobiluncus mulieris ATCC 35239] gi|307699879|ref|ZP_07636930.1| DNA binding domain protein, excisionase family [Mobiluncus mulieris FB024-16] gi|304649648|gb|EFM46930.1| modification methylase Eco47II [Mobiluncus mulieris ATCC 35239] gi|307614917|gb|EFN94135.1| DNA binding domain protein, excisionase family [Mobiluncus mulieris FB024-16] Length = 424 Score = 91.0 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 DLF G GG L LE SE++ +V T + N PN + GD+A + Sbjct: 77 FTSVDLFAGAGGTALGLENA----GFRHVLLSELDKDAVATLRLNRPNWNVSAGDVASLD 132 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 + D++ GFPCQ FS AG Sbjct: 133 FRAFAGKVDLVEGGFPCQAFSYAG 156 >gi|269976186|ref|ZP_06183182.1| modification methylase Eco47II [Mobiluncus mulieris 28-1] gi|269935515|gb|EEZ92053.1| modification methylase Eco47II [Mobiluncus mulieris 28-1] Length = 424 Score = 91.0 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 DLF G GG L LE SE++ +V T + N PN + GD+A + Sbjct: 77 FTSVDLFAGAGGTALGLENA----GFRHVLLSELDKDAVATLRLNRPNWNVSAGDVASLD 132 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 + D++ GFPCQ FS AG Sbjct: 133 FRAFAGKVDLVEGGFPCQAFSYAG 156 >gi|227876656|ref|ZP_03994765.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC 35243] gi|227842553|gb|EEJ52753.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC 35243] Length = 424 Score = 91.0 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 DLF G GG L LE SE++ +V T + N PN + GD+A + Sbjct: 77 FTSVDLFAGAGGTALGLENA----GFRHVLLSELDKDAVATLRLNRPNWNVSAGDVASLD 132 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 + D++ GFPCQ FS AG Sbjct: 133 FRAFAGKVDLVEGGFPCQAFSYAG 156 >gi|328947595|ref|YP_004364932.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447919|gb|AEB13635.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 476 Score = 91.0 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 F G G+ +E+ + +SEI P + KT N PN + GDI +DI Sbjct: 78 LSFFSGAMGLDYGIEKA----GIHPLLASEIEPNARKTILLNRPNIGLIGDINNYSAKDI 133 Query: 65 PDH---------DVLLAGFPCQPFSQAG 83 D+++ G PCQ FS AG Sbjct: 134 RKFANISEKQEIDLVIGGPPCQAFSTAG 161 >gi|315644199|ref|ZP_07897369.1| DNA-cytosine methyltransferase [Paenibacillus vortex V453] gi|315280574|gb|EFU43863.1| DNA-cytosine methyltransferase [Paenibacillus vortex V453] Length = 485 Score = 91.0 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 28/108 (25%) Query: 2 LKITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINP 37 + LF G GG+ + E + +++++ Sbjct: 57 FNLVSLFSGCGGLDMGFELAGLAAVIGEEAAMEAFKDKDKFNEVRHKSIFHTIYTNDLFT 116 Query: 38 YSVKTYQANFPNTLIFG--DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + ++Y+ NFP +++ DI K+K + P DV++ GFPC FS+AG Sbjct: 117 EANESYKINFPQSVVQHRKDIRKVK--NFPKADVVVGGFPCPGFSEAG 162 >gi|307210936|gb|EFN87251.1| tRNA (cytosine-5-)-methyltransferase [Harpegnathos saltator] Length = 238 Score = 91.0 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 +K+ +L+ GIGG+ L ++ + + +INP + Y+ NFP T++ +I I Sbjct: 1 MKVLELYSGIGGMHFALLESGIPA--KVVAAIDINPVANDVYRHNFPETVLMNRNIQSIS 58 Query: 61 TQDIPDHDV--LLAGFPCQPFSQAG 83 Q + DV +L PCQPF++ G Sbjct: 59 AQTLNKLDVDAILMSPPCQPFTRLG 83 >gi|299469435|emb|CBH51836.1| putative DNA (cytosine-5-)-methyltransferase [Campylobacter fetus subsp. fetus] Length = 105 Score = 91.0 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 19/101 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTF----------------NHRNVECFFSSEINPYSVKTYQA 45 ++I DLF GIGG L E N + EI+ K + Sbjct: 4 MQILDLFSGIGGFSLGFESANFKDYDFLKLPTKQESVNDGFFKTTAFCEIDTNCHKVLKK 63 Query: 46 NFPNTLIFGDIAKIKTQDIP---DHDVLLAGFPCQPFSQAG 83 ++ + +IF D+ KI D+ D++ GFPCQ S AG Sbjct: 64 HWASAIIFNDVTKITKDDLAPLGKIDIITGGFPCQDLSIAG 104 >gi|50365124|ref|YP_053549.1| modification methylase Sau3AI (GATC cytosine-specific methyltransferase) [Mesoplasma florum L1] gi|50363680|gb|AAT75665.1| modification methylase Sau3AI (GATC cytosine-specific methyltransferase) [Mesoplasma florum L1] Length = 404 Score = 91.0 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 8/87 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFGDI 56 +K+ +LF G+GG L L+++ N E FS++ P ++ NF ++ + Sbjct: 5 IKVVELFAGVGGFSLALKKSKG--NYEVIFSNQWEPSTKNQFAFNALNKNFKKHILSNED 62 Query: 57 AKIKTQDIP-DHDVLLAGFPCQPFSQA 82 + + +P D D+L+ GFPCQ +S A Sbjct: 63 IQFAKEKLPNDFDLLVGGFPCQDYSVA 89 >gi|77409601|ref|ZP_00786278.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae COH1] gi|77171795|gb|EAO74987.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae COH1] Length = 333 Score = 91.0 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +K +LF G GG+ L +E+ + E + + +T + N PN +I D+A I Sbjct: 1 MKSIELFAGAGGLALGIEKA----GFDTIGLVEFDSAASETLKYNRPNWNVIHDDVANIS 56 Query: 61 TQDIPDH--------DVLLAGFPCQPFSQAG 83 D+ ++ D+L G PCQ FS AG Sbjct: 57 KLDLEEYFLIKKGELDLLSGGAPCQSFSYAG 87 >gi|15675067|ref|NP_269241.1| putative methyl transferase [Streptococcus pyogenes M1 GAS] gi|71910613|ref|YP_282163.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS5005] gi|306827418|ref|ZP_07460705.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pyogenes ATCC 10782] gi|13622222|gb|AAK33962.1| putative methyl transferase [Streptococcus pyogenes M1 GAS] gi|71853395|gb|AAZ51418.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS5005] gi|304430565|gb|EFM33587.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pyogenes ATCC 10782] Length = 107 Score = 91.0 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL L + EC EI+ ++ ++Y+A + + F DI ++ Sbjct: 1 MKFLDLFAGIGGFRLGLINQCH----ECIGFCEIDKFARQSYKAIYETEGEIEFHDIRQV 56 Query: 60 KTQDIP----DHDVLLAGF 74 QD D++ GF Sbjct: 57 TDQDFRQLRGQVDIICGGF 75 >gi|328782909|ref|XP_393991.3| PREDICTED: tRNA (cytosine-5-)-methyltransferase [Apis mellifera] Length = 360 Score = 90.6 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 5/86 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59 M+++ +L+ GIGG+ L+++ + + +IN + Y+ NFPN L+ +I + Sbjct: 1 MMRVLELYSGIGGMHYALQESGIK--GDIVAAVDINTVANSIYKYNFPNVLLLNCNIQSL 58 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 Q+I + D +L PCQP+++ G Sbjct: 59 SAQEINNLNIDTILMSPPCQPYTRIG 84 >gi|299142721|ref|ZP_07035850.1| C-5 cytosine-specific DNA methylase superfamily [Prevotella oris C735] gi|298575750|gb|EFI47627.1| C-5 cytosine-specific DNA methylase superfamily [Prevotella oris C735] Length = 398 Score = 90.6 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +++ LF GIG E + F EIN + FPN++ + +I Sbjct: 4 IIRHASLFSGIG----APELAALWLGWQNVFHCEINEFCNTILNYWFPNSINYENIKTTN 59 Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83 D+L GFPCQPFS AG Sbjct: 60 FSQWQGKIDILTGGFPCQPFSSAG 83 >gi|312385012|gb|EFR29606.1| hypothetical protein AND_01274 [Anopheles darlingi] Length = 348 Score = 90.6 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L++ +LF GIGG+R+ LE+T E + ++NP + Y NF G+I + Sbjct: 13 LRVLELFSGIGGMRMALERTGRA--FEIVSAIDVNPIANSVYTHNFGEKAARNGNILSLT 70 Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83 + I D +L PCQPF++ G Sbjct: 71 AKTISKLAIDTVLMSPPCQPFTRNG 95 >gi|309378924|emb|CBX22511.1| putative DNA cytosine methyltransferase [Neisseria lactamica Y92-1009] Length = 330 Score = 90.6 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIK 60 +K DLF G GG+ L EQ E + E + ++ Y+ NF + + D+ + Sbjct: 1 MKCIDLFAGCGGLSLGFEQA----GFEVCAAFEKWDK-AIDIYRKNFNHPVYETDLTDEQ 55 Query: 61 T--QDIPDH--DVLLAGFPCQPFSQAG 83 T I ++ D+++ G PCQ FS AG Sbjct: 56 TAISQISNYQPDLIMGGPPCQDFSSAG 82 >gi|283834737|ref|ZP_06354478.1| modification methylase HgiDII [Citrobacter youngae ATCC 29220] gi|291068977|gb|EFE07086.1| modification methylase HgiDII [Citrobacter youngae ATCC 29220] Length = 351 Score = 90.6 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 13/88 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ D FCG GG E + + + + +Y+ANFPNT I DI ++ Sbjct: 1 MKVIDFFCGCGGASKGFELA----GFDIALGIDFDKSAADSYKANFPNTAFINSDIRNVR 56 Query: 61 TQDIPDH-------DVL-LAGFPCQPFS 80 +DI + D++ A PCQPFS Sbjct: 57 VRDIAEIVPDWKENDLIFCACAPCQPFS 84 >gi|284051998|ref|ZP_06382208.1| cytosine-specific methyltransferase [Arthrospira platensis str. Paraca] gi|79835461|gb|ABB52090.1| Mod [Arthrospira platensis] gi|291568828|dbj|BAI91100.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39] Length = 411 Score = 90.6 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 15/90 (16%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQD 63 DLF G GG+ L LE + + E + + NFP I GDI+++K+ + Sbjct: 8 IDLFAGCGGMSLGLEAA----GFDVAVAVEFDAVHCLVHHFNFPYCHTICGDISQVKSAE 63 Query: 64 IPD----------HDVLLAGFPCQPFSQAG 83 I D D++ G PCQ FS G Sbjct: 64 ILDQLQLKYGHTEVDLIAGGPPCQGFSHIG 93 >gi|79835453|gb|ABB52085.1| Mod [Arthrospira platensis] gi|291569776|dbj|BAI92048.1| type II DNA modification methyltransferase [Arthrospira platensis NIES-39] Length = 429 Score = 90.6 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 13/90 (14%) Query: 2 LK--ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK 58 +K + D F G GG L + H + EI+ ++ +T+Q N PN LI GDI Sbjct: 38 MKYSVLDTFAGAGGFSLGFQWAGAH----IIGAIEIDEWAGETFQFNHPNAHLIKGDIKG 93 Query: 59 IKTQDIPDH------DVLLAGFPCQPFSQA 82 I + I D ++L G PCQ FS Sbjct: 94 ITDEQILDTFGEIKPHIILGGIPCQGFSIC 123 >gi|261401478|ref|ZP_05987603.1| modification methylase HindV [Neisseria lactamica ATCC 23970] gi|269208450|gb|EEZ74905.1| modification methylase HindV [Neisseria lactamica ATCC 23970] Length = 330 Score = 90.6 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIK 60 +K DLF G GG+ L EQ E + E + ++ Y+ NF + + D+ + Sbjct: 1 MKCIDLFAGCGGLSLGFEQA----GFEVCAAFEKWDK-AIDIYRKNFNHPVYETDLTDEQ 55 Query: 61 T--QDIPDH--DVLLAGFPCQPFSQAG 83 T I ++ D+++ G PCQ FS AG Sbjct: 56 TAISQISNYQPDLIMGGPPCQDFSSAG 82 >gi|313669224|ref|YP_004049508.1| DNA modification methylase [Neisseria lactamica ST-640] gi|313006686|emb|CBN88152.1| putative DNA modification methylase [Neisseria lactamica 020-06] Length = 330 Score = 90.2 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIK 60 +K DLF G GG+ L EQ E + E + ++ Y+ NF + + D+ + Sbjct: 1 MKCIDLFAGCGGLSLGFEQA----GFEVCAAFEKWDK-AIDIYRKNFNHPVYETDLTDEQ 55 Query: 61 T--QDIPDH--DVLLAGFPCQPFSQAG 83 T I ++ D+++ G PCQ FS AG Sbjct: 56 TAISQISNYQPDLIMGGPPCQDFSSAG 82 >gi|29566860|ref|NP_818425.1| gp127 [Mycobacterium phage Omega] gi|29425585|gb|AAN12767.1| gp127 [Mycobacterium phage Omega] Length = 247 Score = 90.2 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L DLF GIGG L L++ + + EI+ + ++P+ + F DI + Sbjct: 3 LTHVDLFAGIGGFSLTLQRA----GAKTVANVEIDKNCRQILARHYPDAVQFDDIKNVSG 58 Query: 62 QDI------PDHDVLLAGFPCQPFS 80 D+ P+ +L GFPCQ S Sbjct: 59 DDLRSVGFVPERGILTGGFPCQDIS 83 >gi|167771959|ref|ZP_02444012.1| hypothetical protein ANACOL_03332 [Anaerotruncus colihominis DSM 17241] gi|167665757|gb|EDS09887.1| hypothetical protein ANACOL_03332 [Anaerotruncus colihominis DSM 17241] Length = 520 Score = 90.2 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF G GG L + ++SE+ + ++ + FP+ GDI +I Sbjct: 5 ITMGSLFDGSGGFPL----ASAIHGILPVWASEVEKFPIEVTKKRFPHMEHLGDITRIDG 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 I D++ G PCQ S AG Sbjct: 61 AKIRPVDIITFGSPCQDLSVAG 82 >gi|119873163|ref|YP_931170.1| DNA-cytosine methyltransferase [Pyrobaculum islandicum DSM 4184] gi|119674571|gb|ABL88827.1| DNA-cytosine methyltransferase [Pyrobaculum islandicum DSM 4184] Length = 319 Score = 90.2 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59 M + D+F G GG L + + + EI+ + +TY AN NT++ D+A + Sbjct: 1 MYNVADIFSGAGGFGLGFRKA----GFKIKVAVEIDRDAARTYSANHQNTVVLQEDVANV 56 Query: 60 KTQDI----PDHDVLLAGFPCQPFSQA 82 +D+ + +++ PC+PF+ A Sbjct: 57 DYKDLVKYGGEIKIIIGSPPCEPFTAA 83 >gi|282880843|ref|ZP_06289537.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS 5C-B1] gi|281305284|gb|EFA97350.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS 5C-B1] Length = 374 Score = 90.2 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 27/105 (25%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 + + D+F G+GG+ + E+ ++EI+ ++Y+ N +T+ + DI Sbjct: 1 MNVVDIFSGVGGLSVGFEKA----GFNVVLANEIDEQIAQSYKRNHTHTIMVNEDIRSFV 56 Query: 61 T----------------------QDIPDHDVLLAGFPCQPFSQAG 83 Q++ D +V++ G PCQ FS AG Sbjct: 57 DHFDDSISKATERLNSNCKEKLYQELNDINVVIGGPPCQGFSMAG 101 >gi|242024278|ref|XP_002432555.1| Modification methylase HaeIII, putative [Pediculus humanus corporis] gi|212518015|gb|EEB19817.1| Modification methylase HaeIII, putative [Pediculus humanus corporis] Length = 267 Score = 90.2 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 3/83 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 + + +L+ GIGG+ L+++ + + + +IN + + Y+ NFP TL+ G +I ++ Sbjct: 1 MNVIELYSGIGGMHFALKESG--IDYKVVKAVDINTTANEVYKLNFPKTLLLGKNIQSLQ 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +D D++L PCQP ++ G Sbjct: 59 LEDFNGIDMILMSPPCQPHTRNG 81 >gi|261393337|emb|CAX50970.1| putative type II restriction-modification system enzyme Mod [Neisseria meningitidis 8013] Length = 330 Score = 90.2 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIK 60 +K DLF G GG+ L EQ E + E + ++ Y+ NF + + D+ + Sbjct: 1 MKCIDLFAGCGGLSLGFEQA----GFEVCAAFEKWDK-AIDIYRKNFNHPVYETDLTDEQ 55 Query: 61 T--QDIPDH--DVLLAGFPCQPFSQAG 83 T I ++ D+++ G PCQ FS AG Sbjct: 56 TAISQISNYQPDLIMGGPPCQDFSSAG 82 >gi|291618717|ref|YP_003521459.1| HsdRM [Pantoea ananatis LMG 20103] gi|291153747|gb|ADD78331.1| HsdRM [Pantoea ananatis LMG 20103] Length = 313 Score = 90.2 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 7/84 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M + LF G GG + +++I PY+ Y AN P T + G + I Sbjct: 1 MPTVVSLFSGCGGSDAGVVNA----GFNVLMANDILPYARDVYLANHPETDYVLGSVDNI 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K P D+L+ +PCQ FSQ G Sbjct: 57 K--HFPKADLLVGCYPCQGFSQGG 78 >gi|228964036|ref|ZP_04125166.1| hypothetical protein bthur0004_8960 [Bacillus thuringiensis serovar sotto str. T04001] gi|228795688|gb|EEM43165.1| hypothetical protein bthur0004_8960 [Bacillus thuringiensis serovar sotto str. T04001] Length = 478 Score = 90.2 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAK- 58 K+ DLF G GG Q + + S +I+ + KT + ++ GDI Sbjct: 4 YKVLDLFAGGGGFSTGFLQAKYQENEFDISKSLDIDKEACKTLSNHLSEKRVVNGDITDN 63 Query: 59 -IKTQDI---PDHDVLLAGFPCQPFSQAG 83 IK Q D DV++ G PCQ FS AG Sbjct: 64 RIKEQIFLECEDVDVIIGGPPCQTFSLAG 92 >gi|327311917|ref|YP_004338814.1| DNA-cytosine methyltransferase [Thermoproteus uzoniensis 768-20] gi|326948396|gb|AEA13502.1| DNA-cytosine methyltransferase [Thermoproteus uzoniensis 768-20] Length = 312 Score = 90.2 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 9/85 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKI 59 M + DLF G GG EI+ + +TY NFP ++ D+A I Sbjct: 1 MYNVVDLFAGGGGFSRGFADA----GFRVVLGVEIDANAARTYSYNFPRAVVLEEDVASI 56 Query: 60 KTQDIPDH----DVLLAGFPCQPFS 80 +++ H DV++ G PC+PF+ Sbjct: 57 SYREVERHVGKVDVVIGGSPCEPFT 81 >gi|317500279|ref|ZP_07958506.1| cytosine-specific methyltransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|331087487|ref|ZP_08336423.1| hypothetical protein HMPREF1025_00006 [Lachnospiraceae bacterium 3_1_46FAA] gi|316898322|gb|EFV20366.1| cytosine-specific methyltransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|330410467|gb|EGG89898.1| hypothetical protein HMPREF1025_00006 [Lachnospiraceae bacterium 3_1_46FAA] Length = 410 Score = 90.2 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +LF G GG+ L +E+ E E + + ++ + N PN +I DIA I Sbjct: 77 FTTIELFAGAGGLALGIEKA----GFEPLGLIEFDKDAAESLKTNRPNWRVIHDDIANIS 132 Query: 61 TQDIPDH--------DVLLAGFPCQPFSQAG 83 D+ D+ D+L G PCQ FS AG Sbjct: 133 CLDLEDYFGIKKGELDLLSGGAPCQAFSYAG 163 >gi|238922582|ref|YP_002936095.1| cytosine-specific methyltransferase [Eubacterium rectale ATCC 33656] gi|238874254|gb|ACR73961.1| cytosine-specific methyltransferase [Eubacterium rectale ATCC 33656] Length = 443 Score = 90.2 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 16/95 (16%) Query: 1 ML-KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT--YQANF----PNTLIF 53 ML KI DLF G GG+ L E+ + E+ P + KT Y ++ T I Sbjct: 1 MLPKIIDLFSGCGGLALGFEKA----GFDIVAGIELMPEACKTISYNLSWRYGKKETHIC 56 Query: 54 GDIAKIKTQDIPDH--D---VLLAGFPCQPFSQAG 83 GDI +I+ + D +++ G PCQ +S AG Sbjct: 57 GDITEIEASVFKNSFGDEGCIVIGGPPCQAYSMAG 91 >gi|88854619|ref|ZP_01129286.1| C-5 cytosine-specific DNA methylase family protein [marine actinobacterium PHSC20C1] gi|88816427|gb|EAR26282.1| C-5 cytosine-specific DNA methylase family protein [marine actinobacterium PHSC20C1] Length = 352 Score = 90.2 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAK-IKT 61 + DLF G GG+ ++ E + E + + +Y+A F P+ + G I +++ Sbjct: 1 MIDLFAGAGGLTAGFKKA--SARYETVRAVEWDTAAAASYEATFGPDIVYSGSIQDWLES 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + +P D+++ G PCQ FS G Sbjct: 59 EKVPRADLIVGGPPCQGFSTLG 80 >gi|225019628|ref|ZP_03708820.1| hypothetical protein CLOSTMETH_03581 [Clostridium methylpentosum DSM 5476] gi|224947595|gb|EEG28804.1| hypothetical protein CLOSTMETH_03581 [Clostridium methylpentosum DSM 5476] Length = 390 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 8/87 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M KI DLF G GG+ + + + E + Y+ NF + + D++ ++ Sbjct: 1 MKKIVDLFAGCGGLSMGFQDA----GFNIVGAFEFWDIAADCYEKNFEHPVYRMDLSDVE 56 Query: 61 TQ----DIPDHDVLLAGFPCQPFSQAG 83 + ++++ G PCQ FS AG Sbjct: 57 KSVEKIKLLKPEIIIGGPPCQDFSHAG 83 >gi|260910178|ref|ZP_05916855.1| site-specific DNA-methyltransferase [Prevotella sp. oral taxon 472 str. F0295] gi|260635682|gb|EEX53695.1| site-specific DNA-methyltransferase [Prevotella sp. oral taxon 472 str. F0295] Length = 403 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + LF GIG E F EIN + + +PN++ + DI Sbjct: 6 ITHASLFSGIG----APELAATWMGWRNLFHCEINDFCRTILRYWYPNSVSYEDIKTTNF 61 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 ++ DVL GFPCQPFS AG Sbjct: 62 EEWRGRVDVLTGGFPCQPFSAAG 84 >gi|12229856|sp|P94147|MTA1_RUEGE RecName: Full=Modification methylase AgeI; Short=M.AgeI; AltName: Full=Cytosine-specific methyltransferase AgeI gi|8037880|gb|AAF71525.1|AF247972_2 AgeI methylase [Thalassobius gelatinovorus] gi|1695647|dbj|BAA11333.1| ageI metylase [Thalassobius gelatinovorus] gi|1588637|prf||2209243A AgeI methylase Length = 429 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 +K DLFCG GG+ Q ++++ ++ TY+ N P+ + D I + Sbjct: 1 MKTIDLFCGAGGLGEGFRQA----GFSALYANDHETPALATYKENHPDAVCSTDSIETVD 56 Query: 61 TQDIPD--------HDVLLAGFPCQPFSQAG 83 + I + DV++ G PCQ FS G Sbjct: 57 PKKIREDLGVAPGQVDVVMGGPPCQGFSTYG 87 >gi|325288246|ref|YP_004264427.1| C-5 cytosine-specific DNA methylase [Syntrophobotulus glycolicus DSM 8271] gi|324963647|gb|ADY54426.1| C-5 cytosine-specific DNA methylase [Syntrophobotulus glycolicus DSM 8271] Length = 90 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 4/79 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+ + LF GIGG L H + ++SEI + ++ + FP L GDI K+ Sbjct: 1 MMTMGSLFDGIGGFPL----VAVHNGITPLWASEIEAFPIEVTKIRFPEMLHVGDITKLD 56 Query: 61 TQDIPDHDVLLAGFPCQPF 79 +P DV+ G PCQ + Sbjct: 57 GAALPLVDVICGGSPCQDY 75 >gi|86159861|ref|YP_466646.1| DNA-cytosine methyltransferase [Anaeromyxobacter dehalogenans 2CP-C] gi|85776372|gb|ABC83209.1| DNA-cytosine methyltransferase [Anaeromyxobacter dehalogenans 2CP-C] Length = 380 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 7/84 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML + LF GIGG+ L + ++ +H + C E + + A FP GDI + Sbjct: 1 MLSVAGLFAGIGGLELGMARSGHHTKLLC----ENDACARAVLDARFPEVPKHGDIRTL- 55 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 + +P D ++ AGFPCQ SQAG Sbjct: 56 -ERLPKDTSLVTAGFPCQDLSQAG 78 >gi|332158207|ref|YP_004423486.1| modification methylase [Pyrococcus sp. NA2] gi|331033670|gb|AEC51482.1| modification methylase [Pyrococcus sp. NA2] Length = 310 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 6/79 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + DLF G GG L + + + E KTY NFP +I DI + Sbjct: 12 VIDLFAGAGGFSLGFKLA----GFKIISAIENFKPKAKTYSQNFPEVNVIVSDIKLVNPL 67 Query: 63 DIPD-HDVLLAGFPCQPFS 80 D+ D DV++ G PC+PF+ Sbjct: 68 DVADKVDVIIGGPPCEPFT 86 >gi|154486241|ref|ZP_02027648.1| hypothetical protein BIFADO_00044 [Bifidobacterium adolescentis L2-32] gi|154084104|gb|EDN83149.1| hypothetical protein BIFADO_00044 [Bifidobacterium adolescentis L2-32] Length = 213 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K LF GI + E +EI P+ + ++PN GD+ K+ Sbjct: 1 MKYISLFSGI----EAATVAWQTLGWEPVAYAEIEPFPKAVLKHHYPNVPDLGDMTKVNW 56 Query: 62 QDIPD-HDVLLAGFPCQPFSQAG 83 ++ DV++ G PCQ FS AG Sbjct: 57 KEYHHAADVVVGGSPCQAFSIAG 79 >gi|325268581|ref|ZP_08135211.1| prophage LambdaBa01 protein [Prevotella multiformis DSM 16608] gi|324989109|gb|EGC21062.1| prophage LambdaBa01 protein [Prevotella multiformis DSM 16608] Length = 444 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +++ LF GIG E + F EIN + FPN++ + +I Sbjct: 4 IIRHASLFSGIG----APELAALWLGWQNVFHCEINEFCNTILNYWFPNSINYENIKTTD 59 Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83 D+L GFPCQPFS AG Sbjct: 60 FSRWQGQIDILTGGFPCQPFSSAG 83 >gi|241204300|ref|YP_002975396.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858190|gb|ACS55857.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 662 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L + +L G GG+ L LE E + ++ T + N P ++ GDI ++ Sbjct: 296 LNVIELCAGAGGMSLGLEDA----GFHPLALFEFDKHAAATLRLNRPLWNVVEGDIRQVD 351 Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83 D+L+ G PCQPFS G Sbjct: 352 FTPYRSAGVDLLVGGLPCQPFSIDG 376 >gi|256397638|ref|YP_003119202.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928] gi|256363864|gb|ACU77361.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928] Length = 389 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 LK+ DLFCG GG E+T + E + +I P SV T+Q N L GDI K++ Sbjct: 4 LKVMDLFCGTGGFSKGFEKTGS---FEVVYGIDILPLSVATFQLNHEAALALSGDIRKVR 60 Query: 61 TQDIP--------DHDVLLAGFPCQPFS 80 +I + DV++ G PCQ FS Sbjct: 61 RSEIAEKLNLARDEVDVIIGGPPCQGFS 88 >gi|321476287|gb|EFX87248.1| hypothetical protein DAPPUDRAFT_187425 [Daphnia pulex] Length = 341 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 ++I +L+ GIGG+ E + E FS +IN + Y+ NF T +I + Sbjct: 6 MRILELYSGIGGMHYAAELA--NVGAEVVFSVDINTSANAVYRHNFKQTNQQARNIESLS 63 Query: 61 TQDIPDH--DVLLAGFPCQPFSQAG 83 ++I D+++ PCQPF++ G Sbjct: 64 AKEINKLRPDIIMMSPPCQPFTRVG 88 >gi|313667096|gb|ADR72993.1| M1.BspMI [Bacillus sp. M(2010)] Length = 348 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 11/87 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 + DLF G GG+ + E+ E + + KT++ NFPN DI ++ + Sbjct: 5 VVDLFSGAGGLHIGFEKA----GFEIGLCIDNDINVEKTHKYNFPNIPFMNVDIKELSSD 60 Query: 63 DI------PDHDVLLAGFPCQPFSQAG 83 + + DVL+ G PCQ FS G Sbjct: 61 QVRNIIGNREVDVLIGGPPCQGFSTIG 87 >gi|291165856|gb|EFE27903.1| modification methylase EcoRII [Filifactor alocis ATCC 35896] Length = 375 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 13/89 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + DL GIGGIR E T + +N ++EI+ Y+ TYQ + + Sbjct: 2 LFTTIDLCAGIGGIRKGFELTGHFKN---LVAAEIDRYACLTYQHLYGEDADN----DLT 54 Query: 61 TQDIP------DHDVLLAGFPCQPFSQAG 83 +++ +DVLLAGFPCQ FS+AG Sbjct: 55 SEEFKTALEGLHYDVLLAGFPCQTFSRAG 83 >gi|302383143|ref|YP_003818966.1| DNA-cytosine methyltransferase [Brevundimonas subvibrioides ATCC 15264] gi|302193771|gb|ADL01343.1| DNA-cytosine methyltransferase [Brevundimonas subvibrioides ATCC 15264] Length = 377 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ +LF G GG+ + + + E E + ++ +T N P + GD+ + Sbjct: 1 MRSVELFAGAGGLGIGVARA----GFEPAAVVEWDRWACETLLENKPWPVHRGDVREFSY 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + + +++ G PCQPFS G Sbjct: 57 DHLANIELVSGGPPCQPFSMGG 78 >gi|288929280|ref|ZP_06423125.1| modification methylase HphIA (Cytosine-specific methyltransferase HphIA) [Prevotella sp. oral taxon 317 str. F0108] gi|288329382|gb|EFC67968.1| modification methylase HphIA (Cytosine-specific methyltransferase HphIA) [Prevotella sp. oral taxon 317 str. F0108] Length = 370 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 8/84 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 + DLF G GG + E+ + EI+ TY N N L+ DI + + Sbjct: 6 VIDLFAGCGGFSIGFEKA----GFHVTKAVEIDKQIAHTYSMNHANVLMLNDDIGSVDNE 61 Query: 63 ---DIPDHDVLLAGFPCQPFSQAG 83 + +V++ G PCQ FS AG Sbjct: 62 YNFTRGEAEVIVGGPPCQGFSMAG 85 >gi|307565390|ref|ZP_07627879.1| C-5 cytosine-specific DNA methylase [Prevotella amnii CRIS 21A-A] gi|307345840|gb|EFN91188.1| C-5 cytosine-specific DNA methylase [Prevotella amnii CRIS 21A-A] Length = 492 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +++ LF GIG E + F EIN + FPN++ + +I Sbjct: 4 IIRHASLFSGIG----APELAALWLGWQNVFHCEINEFCNTILSYWFPNSINYENIKTTD 59 Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83 D+L GFPCQPFS AG Sbjct: 60 FSKWQGQIDILTGGFPCQPFSSAG 83 >gi|119483468|ref|ZP_01618882.1| site-specific DNA-methyltransferase [Lyngbya sp. PCC 8106] gi|119458235|gb|EAW39357.1| site-specific DNA-methyltransferase [Lyngbya sp. PCC 8106] Length = 407 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 11/88 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 K+ D+F G GG L + EI+ ++ +T N P T ++ DI I Sbjct: 5 FKVLDIFAGAGGFSLGFKMA----GGTLVGGIEIDQWAGETLAYNHPETQIVIRDIQTIS 60 Query: 61 TQD------IPDHDVLLAGFPCQPFSQA 82 ++ +V++ G PCQ FS Sbjct: 61 DEEAISLFKYNKPNVIIGGPPCQGFSVC 88 >gi|148252729|ref|YP_001237314.1| putative 5-methylcytosine methyltransferase [Bradyrhizobium sp. BTAi1] gi|146404902|gb|ABQ33408.1| putative 5-methylcytosine methyltransferase [Bradyrhizobium sp. BTAi1] Length = 381 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 18/89 (20%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------TLIFGDIAKI 59 DLF G GG L + + E + Y+ +TY+AN + L DI+K+ Sbjct: 26 DLFAGAGGFSLGAHLA----GINVAAAIEWDKYACQTYRANLIDTGLASTHLFEEDISKL 81 Query: 60 KTQDI--------PDHDVLLAGFPCQPFS 80 + D+LL G PCQ FS Sbjct: 82 APNRVKLVAGFHERPCDILLGGPPCQGFS 110 >gi|108805045|ref|YP_644982.1| DNA (cytosine-5-)-methyltransferase [Rubrobacter xylanophilus DSM 9941] gi|108766288|gb|ABG05170.1| DNA (cytosine-5-)-methyltransferase [Rubrobacter xylanophilus DSM 9941] Length = 405 Score = 89.8 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 17/93 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 DLF G GG+ L + + +++++ ++ TY+ N + ++ GDI + D Sbjct: 152 FADLFSGAGGLSLGFQWA----GWQPVVANDVDEAALLTYRDNIHDVIVLGDIREHHVID 207 Query: 64 --IPDHD-----------VLLAGFPCQPFSQAG 83 I + +L G PCQ FS AG Sbjct: 208 AIIQKCEEARDASPNMPFFVLGGPPCQGFSTAG 240 >gi|293369629|ref|ZP_06616207.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f] gi|292635333|gb|EFF53847.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f] Length = 296 Score = 89.4 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + +LF GIGG LE + + SEI+ +++ ++ NFP G + I Sbjct: 1 MVLLELFSGIGGFSKGLEAAG--YTFDKVYFSEIDKHAIANFKYNFPYAEHIGTVTNIGE 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 I ++ G PCQ FS G Sbjct: 59 VGIERPHIVTFGSPCQNFSAIG 80 >gi|291460136|ref|ZP_06599526.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291417477|gb|EFE91196.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 319 Score = 89.4 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + LF GIGG+ L E ++ E+ Y + ++P+ + DI + Sbjct: 1 MNHLSLFSGIGGLDLAAEWA----GIKTVGQCELADYPYSVLEKHWPDVPKWRDIRDLTK 56 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + D++ GFPCQPFS AG Sbjct: 57 ESFYERTGLRTVDIISGGFPCQPFSFAG 84 >gi|126657178|ref|ZP_01728344.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. CCY0110] gi|126621449|gb|EAZ92160.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. CCY0110] Length = 433 Score = 89.4 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 DLF G+GG+ L EQ + S EI+P + NFP T I + KI Sbjct: 9 VDLFAGVGGMTLGFEQA----GFDVLASVEIDPIHCSIHHYNFPFWTTICTSVTKITANQ 64 Query: 64 IPD--------HDVLLAGFPCQPFSQAG 83 I + DV+ G PCQ FS G Sbjct: 65 IRELSKIKNKPIDVVFGGPPCQGFSLMG 92 >gi|322796386|gb|EFZ18927.1| hypothetical protein SINV_80475 [Solenopsis invicta] Length = 354 Score = 89.4 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 5/86 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 ++++ +L+ GIGG+ L ++ + + +INP + Y NFP T LI +I I Sbjct: 8 IMRVMELYSGIGGMHYALCESGIAA--KVVTAIDINPIANDVYHHNFPETVLINRNIQSI 65 Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83 Q++ D++L PCQPF++ G Sbjct: 66 NAQELNKLNIDIILMSPPCQPFTRLG 91 >gi|23465149|ref|NP_695752.1| modification methylase Sau3AI [Bifidobacterium longum NCC2705] gi|189440221|ref|YP_001955302.1| site-specific DNA methylase [Bifidobacterium longum DJO10A] gi|23325769|gb|AAN24388.1| modification methylase Sau3AI [Bifidobacterium longum NCC2705] gi|189428656|gb|ACD98804.1| Site-specific DNA methylase [Bifidobacterium longum DJO10A] Length = 423 Score = 89.4 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 24/105 (22%) Query: 2 LKITDLFCGIGGIRLDL---------EQTFNHRN-VECFFSSEINP-------YSVKTYQ 44 ++I +LF G+GG RL L E + ++++ P ++ + Y+ Sbjct: 3 IRIAELFAGVGGFRLGLDGYHDAAHPEFDMKPAGDFKTVWANQWEPNGQESKQFAWRCYE 62 Query: 45 ANFPN-TLIFGDIAKIKTQ------DIPDHDVLLAGFPCQPFSQA 82 F + + DIA + + IP+ D+L+ GFPCQ +S A Sbjct: 63 KRFGEGSCVNEDIAVVLQEVKDGKRSIPEFDMLVGGFPCQDYSVA 107 >gi|330998524|ref|ZP_08322345.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] gi|329568255|gb|EGG50071.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] Length = 379 Score = 89.4 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKI 59 M+ ++F G GG+ +E E N + KT + N+ P+ + DI Sbjct: 1 MINSLEIFSGAGGLAKGIEMAGARHQ----AFVEWNGDACKTLRWNYSPDIVFETDIRDF 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + + DV+ G PCQPFS G Sbjct: 57 QFSQFSNIDVIAGGPPCQPFSLGG 80 >gi|227547415|ref|ZP_03977464.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212062|gb|EEI79958.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 433 Score = 89.4 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 24/105 (22%) Query: 2 LKITDLFCGIGGIRLDL---------EQTFNHRN-VECFFSSEINP-------YSVKTYQ 44 ++I +LF G+GG RL L E + ++++ P ++ + Y+ Sbjct: 13 IRIAELFAGVGGFRLGLDGYHDAAHPEFDMKPAGDFKTVWANQWEPNGQESKQFAWRCYE 72 Query: 45 ANFPN-TLIFGDIAKIKTQ------DIPDHDVLLAGFPCQPFSQA 82 F + + DIA + + IP+ D+L+ GFPCQ +S A Sbjct: 73 KRFGEGSCVNEDIAVVLQEVKDGKRSIPEFDMLVGGFPCQDYSVA 117 >gi|20068992|gb|AAM09644.1|AF458984_2 m6 adenine and m5 cytosine DNA methyltransferase [Acinetobacter lwoffii] Length = 952 Score = 89.4 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61 DLF G GG+ + Q ++ F+++ + +++AN P T +I+GDI++ T Sbjct: 728 TFGDLFAGAGGMSQGMFQA----GLKPIFANDCFLSACISHKANHPETDVIYGDISEAHT 783 Query: 62 QDI-----PDHDVLLAGFPCQPFSQAG 83 + D+L G PCQ FSQAG Sbjct: 784 KQKIYQYANKIDILCGGPPCQGFSQAG 810 >gi|53712640|ref|YP_098632.1| site-specific DNA-methyltransferase (cytosine-specific) [Bacteroides fragilis YCH46] gi|52215505|dbj|BAD48098.1| site-specific DNA-methyltransferase (cytosine-specific) [Bacteroides fragilis YCH46] Length = 296 Score = 89.4 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + +LF GIGG LE + + SEI+ +++ ++ NFP G + I Sbjct: 1 MVLLELFSGIGGFSKGLEAAG--YTFDKVYFSEIDKHAIANFKYNFPYAEHIGTVTNIGE 58 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 I ++ G PCQ FS G Sbjct: 59 VGIERPHIVTFGSPCQNFSAIG 80 >gi|316934943|ref|YP_004109925.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1] gi|315602657|gb|ADU45192.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1] Length = 495 Score = 89.4 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 23/100 (23%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---------TLIF 53 ++ DLF G GG+ L E S EI+ + +++ NF + Sbjct: 23 RVLDLFSGCGGLSLGFHSA----GYEIAASVEIDELAARSHAINFYKGQAPELIERQAVA 78 Query: 54 GDIAKIKTQDIPD----------HDVLLAGFPCQPFSQAG 83 DI KI D+ D+++ G PCQ +++ G Sbjct: 79 RDITKIDPDDLTSDLGLGPSKLAFDLIVGGPPCQAYARVG 118 >gi|18202059|sp|O52702|MTA1_ACEPA RecName: Full=Modification methylase ApaLI; Short=M.ApaLI; AltName: Full=Cytosine-specific methyltransferase ApaLI gi|2865599|gb|AAC97180.1| ApaLI methyltransferase [Acetobacter pasteurianus] Length = 429 Score = 89.4 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 10/86 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF G GG Q ++ F +EIN + +TYQ N + D++ + Sbjct: 7 VVSLFAGAGGFSSGFSQA----GLKPLFGAEINADACQTYQENVGSPCHQLDLSTVDPSH 62 Query: 64 IPDHD------VLLAGFPCQPFSQAG 83 I V++ G PCQ FS AG Sbjct: 63 IEMLTGGKRPFVVIGGPPCQGFSTAG 88 >gi|282860047|ref|ZP_06269129.1| C-5 cytosine-specific DNA methylase [Prevotella bivia JCVIHMP010] gi|282587175|gb|EFB92398.1| C-5 cytosine-specific DNA methylase [Prevotella bivia JCVIHMP010] Length = 526 Score = 89.4 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +++ LF GIG E + F EIN + FPN++ + +I Sbjct: 4 IIRHASLFSGIG----APELAALWLGWQNVFHCEINEFCNTILSYWFPNSINYENIKTTD 59 Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83 D+L GFPCQPFS AG Sbjct: 60 FSKWQGQIDILTGGFPCQPFSSAG 83 >gi|289167785|ref|YP_003446054.1| site-specific DNA methylase [Streptococcus mitis B6] gi|288907352|emb|CBJ22189.1| site-specific DNA methylase [Streptococcus mitis B6] Length = 351 Score = 89.4 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 I DLF G GG+ E + + +++T+Q N N ++ GDIA I Sbjct: 4 YNIVDLFSGAGGLSYGFEMA----GFNVLLGIDNDEKALETFQKNHQNSEILCGDIANIS 59 Query: 61 -TQDIP------DHDVLLAGFPCQPFSQAG 83 +DI D+++ G PCQ S +G Sbjct: 60 YEEDIKPIIGEQKIDIIVGGPPCQGMSLSG 89 >gi|328766176|gb|EGF76234.1| hypothetical protein BATDEDRAFT_28720 [Batrachochytrium dendrobatidis JAM81] Length = 373 Score = 89.4 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 27/107 (25%) Query: 2 LKITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINP 37 L + LF G GG+ L LE +S+++ Sbjct: 14 LTVLGLFSGCGGLDLGLELAGLAAAIGEEKALEAFKNKEKFDAIRGESIFHTIYSNDLFK 73 Query: 38 YSVKTYQANFPNTLIFG-DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + ++Y+ NFP+T DI KIK + P+ D++L GFPC FS+AG Sbjct: 74 EANESYKLNFPSTFQHELDIRKIK--EFPNADLVLGGFPCPGFSEAG 118 >gi|228471867|ref|ZP_04056638.1| cytosine-specific methyltransferase NlaX [Capnocytophaga gingivalis ATCC 33624] gi|228276797|gb|EEK15500.1| cytosine-specific methyltransferase NlaX [Capnocytophaga gingivalis ATCC 33624] Length = 186 Score = 89.4 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 8/90 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHR---NVECFFSSEINPYSVKTYQANFPNT-----LIF 53 L+I + F G GG L + E SEI+ ++ + N + Sbjct: 11 LRIFEGFAGYGGASFALRKLKEKYPQFKYEVVGYSEIDKFASSLFDVNHKGKQGNPIKNW 70 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 GDI I ++PD D+ GFPCQPFS AG Sbjct: 71 GDITLIDPYELPDFDMFTGGFPCQPFSSAG 100 >gi|1644234|dbj|BAA11339.1| ApaLI methylase [Acetobacter pasteurianus] Length = 429 Score = 89.4 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 10/86 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF G GG Q ++ F +EIN + +TYQ N + D++ + Sbjct: 7 VVSLFAGAGGFSSGFSQA----GLKPLFGAEINADACQTYQENVGSPCHQLDLSTVDPSH 62 Query: 64 IPDHD------VLLAGFPCQPFSQAG 83 I V++ G PCQ FS AG Sbjct: 63 IEMLTGGKRPFVVIGGPPCQGFSTAG 88 >gi|46580156|ref|YP_010964.1| C-5 cytosine-specific DNA methylase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46449573|gb|AAS96223.1| C-5 cytosine-specific DNA methylase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|311233853|gb|ADP86707.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1] Length = 369 Score = 89.4 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 18/92 (19%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------PNTLIFGDI 56 K DLFCG GG L + +E + E N Y+ TY+ NF P L GDI Sbjct: 12 KAVDLFCGAGGFSL----AARNLGIEVVAALENNHYAAATYRHNFIEGSRRPPLLFEGDI 67 Query: 57 AKIKTQDI--------PDHDVLLAGFPCQPFS 80 I + D+++ G PCQ FS Sbjct: 68 LAISPEAFMQAANLTPGGVDIIMGGPPCQGFS 99 >gi|148988375|ref|ZP_01819822.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae SP6-BS73] gi|147926056|gb|EDK77130.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae SP6-BS73] Length = 351 Score = 89.0 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 I DLF G GG+ E + + +++T+Q N N ++ GDIA I Sbjct: 4 YNIVDLFSGAGGLSYGFEMA----GFNVLLGIDNDEKALETFQKNHQNSEILCGDIANIS 59 Query: 61 -TQDIP------DHDVLLAGFPCQPFSQAG 83 +DI D+++ G PCQ S +G Sbjct: 60 YEEDIKPIIGEQKIDIIVGGPPCQGMSLSG 89 >gi|218134306|ref|ZP_03463110.1| hypothetical protein BACPEC_02199 [Bacteroides pectinophilus ATCC 43243] gi|217991681|gb|EEC57687.1| hypothetical protein BACPEC_02199 [Bacteroides pectinophilus ATCC 43243] Length = 622 Score = 89.0 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 11/91 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIA-- 57 M +I DLF G GG+ +E+ + + + + N +++T++ N P+T + GDI Sbjct: 269 MFRILDLFSGAGGMSYGMEK---NEHFTTEVALDFNEKALQTFKHNMPDTETVCGDITDE 325 Query: 58 KIKTQDIP-----DHDVLLAGFPCQPFSQAG 83 KIK + I ++++ G PCQ FS G Sbjct: 326 KIKAKVIELCKAKKVNMIIGGPPCQGFSLKG 356 >gi|158339669|ref|YP_001520676.1| C-5 cytosine-specific DNA methylase [Acaryochloris marina MBIC11017] gi|158309910|gb|ABW31526.1| C-5 cytosine-specific DNA methylase [Acaryochloris marina MBIC11017] Length = 382 Score = 89.0 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 12/88 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIAKI- 59 + D+FCG GG+ L ++ + + NP++VKT+ NFP L DI I Sbjct: 1 MLDIFCGAGGMSLGFQKA----GCKILGGIDNNPHAVKTHHQNFPKCKLKLDATDIRDIE 56 Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83 +D+ + D+L+ G PCQ FS+ G Sbjct: 57 NLEDLGIDPKEVDILIGGPPCQVFSRVG 84 >gi|153814224|ref|ZP_01966892.1| hypothetical protein RUMTOR_00433 [Ruminococcus torques ATCC 27756] gi|145848620|gb|EDK25538.1| hypothetical protein RUMTOR_00433 [Ruminococcus torques ATCC 27756] Length = 702 Score = 89.0 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 11/91 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIA-- 57 M +I DLF G GG+ +E+ + + + + N +++T++ N P+T + GDI Sbjct: 349 MFRILDLFSGAGGMSYGMEK---NEHFTTEVALDFNEKALQTFKHNMPDTETVCGDITDE 405 Query: 58 KIKTQDIP-----DHDVLLAGFPCQPFSQAG 83 KIK + I ++++ G PCQ FS G Sbjct: 406 KIKAKVIELCKAKKVNMIIGGPPCQGFSLKG 436 >gi|254470861|ref|ZP_05084264.1| DNA-cytosine methyltransferase [Pseudovibrio sp. JE062] gi|211960003|gb|EEA95200.1| DNA-cytosine methyltransferase [Pseudovibrio sp. JE062] Length = 498 Score = 89.0 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 18/95 (18%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAK 58 ++ DLF G GG+ L + + E + E++P++ +++ NF DI Sbjct: 19 RVLDLFAGCGGLSLGF----HSKGFEIAGAVELDPHAARSHGMNFHPGLETHAQPVDITS 74 Query: 59 IKTQDIPD----------HDVLLAGFPCQPFSQAG 83 + +++ D+++ G PCQ F++ G Sbjct: 75 VGPEELAKKLSLGDTDHAIDIIIGGPPCQAFARVG 109 >gi|331003101|ref|ZP_08326612.1| hypothetical protein HMPREF0491_01474 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412985|gb|EGG92361.1| hypothetical protein HMPREF0491_01474 [Lachnospiraceae oral taxon 107 str. F0167] Length = 356 Score = 89.0 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQD 63 DLF G GG L++ ++ + EI+ ++ +TY+ N P ++F DI I ++ Sbjct: 7 VDLFSGAGGTTSGLKKA----GIKVAVAVEIDKWAAQTYRHNNPEVVLFEADIRDISGKE 62 Query: 64 IPDH------D--VLLAGFPCQPFSQAG 83 I D+ D +L+A PCQ FS G Sbjct: 63 IIDNISLKSSDKLLLVACPPCQGFSTIG 90 >gi|209809294|ref|YP_002264832.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio salmonicida LFI1238] gi|208010856|emb|CAQ81257.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio salmonicida LFI1238] Length = 387 Score = 89.0 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 18/92 (19%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------PNTLIFGDI 56 K DLF G GG L + ++ VE + E + + TY+ NF P L+ DI Sbjct: 4 KAIDLFAGAGGFTL----SAHNAGVEVVAAIEFDKAAANTYKKNFILKDKKPIKLLNEDI 59 Query: 57 AKIKTQDIP--------DHDVLLAGFPCQPFS 80 + + + D++L G PCQ FS Sbjct: 60 NLVDPTGLRESLNLKAGELDLILGGPPCQGFS 91 >gi|77465763|ref|YP_355266.1| cytosine-specific DNA methylase [Rhodobacter sphaeroides 2.4.1] gi|77390181|gb|ABA81365.1| Cytosine-specific DNA methylase [Rhodobacter sphaeroides 2.4.1] Length = 443 Score = 89.0 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQD 63 DLF G GG+ L EQ + + EI+P ++ NFP+T + + + ++ Sbjct: 6 IDLFAGAGGLSLGFEQA----GFDVAAAVEIDPVHCAVHKFNFPDTAVIPRSVVGLTAEE 61 Query: 64 IPD--------HDVLLAGFPCQPFSQAG 83 I + D + G PCQ FS G Sbjct: 62 IRESAGIGNRPIDCVFGGPPCQGFSLIG 89 >gi|58580230|ref|YP_199246.1| modification methylase XorII [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424824|gb|AAW73861.1| Modification methylase XorII [Xanthomonas oryzae pv. oryzae KACC10331] Length = 442 Score = 88.7 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQD 63 DLF G GG+ L EQ + + +I+P ++ NFP + + + + Sbjct: 25 IDLFAGAGGLSLGFEQA----GFDLVAAVDIDPIHCAAHKFNFPKCATVCKSVVDVTGDE 80 Query: 64 I--------PDHDVLLAGFPCQPFSQAG 83 + D D+++ G PCQ FS G Sbjct: 81 LRRIAGIGKRDIDIVIGGAPCQGFSLIG 108 >gi|206972356|ref|ZP_03233302.1| modification methylase [Bacillus cereus AH1134] gi|206732681|gb|EDZ49857.1| modification methylase [Bacillus cereus AH1134] Length = 309 Score = 88.7 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 3/82 (3%) Query: 2 LKITDLFCG-IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +K+ LF G I G+ L + + E S+E+ +VKT + N+ +T+I DI + Sbjct: 4 IKVGSLFSGAIDGMSLGFQMC--SKQYEVIISNELEATAVKTAKLNYNHTIIQQDIRNVS 61 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 + + DV+L FPCQ +S+A Sbjct: 62 VEAFRECDVILGTFPCQEYSKA 83 >gi|41584550|gb|AAS09913.1| BsmBI M1-M2 methyltransferase fusion protein [Geobacillus stearothermophilus] Length = 1068 Score = 88.7 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 17/94 (18%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--IFGDIA--K 58 DLF G GG+ E +E + EI+ + +TY N + + I GDI + Sbjct: 793 TFVDLFAGAGGLSYGFELA----GLEGMAALEIDKDAAETYAKNHSSNIDVIVGDIRSPE 848 Query: 59 IKTQDIPDH---------DVLLAGFPCQPFSQAG 83 I+ Q I D++ G PCQ FS AG Sbjct: 849 IQNQLIESVKNKLKGRTLDLIAGGLPCQGFSTAG 882 >gi|156936516|ref|YP_001440431.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC BAA-894] gi|156534770|gb|ABU79595.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC BAA-894] Length = 415 Score = 88.7 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 13/89 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L DLF G GG+ L + +++EI+P +TY N P T++ DI ++ Sbjct: 16 LTSLDLFAGAGGLSEGLREA----GFTSLYANEISPRYAQTYAVNHPGTIVESRDIREVD 71 Query: 61 TQDIP--------DHDVLLAGFPCQPFSQ 81 I + D++ G PCQ FS Sbjct: 72 AHKIRNLLGLKRGELDLIAGGPPCQGFSI 100 >gi|315656923|ref|ZP_07909810.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492878|gb|EFU82482.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 503 Score = 88.7 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L ++ ++SE++P++++ + N P GDI + Sbjct: 4 LTLGSLFDGSGGFPL----AAKMVGIKPMWASEVDPFAIRVTKKNLPEVRHVGDINLLDG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + DV+ G PCQ S AG Sbjct: 60 GRLQPVDVITFGSPCQDLSIAG 81 >gi|224418258|ref|ZP_03656264.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter canadensis MIT 98-5491] gi|253827583|ref|ZP_04870468.1| putative methylase [Helicobacter canadensis MIT 98-5491] gi|313141791|ref|ZP_07803984.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis MIT 98-5491] gi|253510989|gb|EES89648.1| putative methylase [Helicobacter canadensis MIT 98-5491] gi|313130822|gb|EFR48439.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis MIT 98-5491] Length = 589 Score = 88.7 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 11/91 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 M +I DLFCG GG LEQ ++N + + ++ T+ NF + I GDI Sbjct: 1 MYRILDLFCGAGGFSYGLEQ---NKNFKTVIGLDFEKAAIDTFNHNFKQAIGICGDITNK 57 Query: 60 KTQDI-------PDHDVLLAGFPCQPFSQAG 83 + +D ++++ G PCQ FS G Sbjct: 58 EVKDKVVNLAKELKVNMVIGGPPCQGFSLKG 88 >gi|152994008|ref|YP_001359729.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1] gi|151425869|dbj|BAF73372.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1] Length = 362 Score = 88.7 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 D+F G GG+ + + + E + ++ TY+AN P+T + DI ++ Sbjct: 5 FTAVDIFSGAGGMSIGAVMA----GITPVLAVEFDEHAAATYKANHPHTNVLAKDIKGVE 60 Query: 61 T-QDIPDHDVLL-AGFPCQPFSQA 82 + + H LL G PCQ FS A Sbjct: 61 PLKHVEKHPFLLFGGPPCQGFSVA 84 >gi|300866085|ref|ZP_07110814.1| site-specific DNA-methyltransferase [Oscillatoria sp. PCC 6506] gi|300335911|emb|CBN55972.1| site-specific DNA-methyltransferase [Oscillatoria sp. PCC 6506] Length = 436 Score = 88.7 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 D F G GG+ L EQ + S EI+P T+ NFP ++ I I + Sbjct: 13 IDFFAGAGGMTLGFEQA----GFDVLASVEIDPIHCATHNFNFPFWSVFCQSIIDITGAE 68 Query: 64 I--------PDHDVLLAGFPCQPFSQAG 83 I + DV+ G PCQ FS G Sbjct: 69 IRQKSAIGDREIDVVFGGPPCQGFSLIG 96 >gi|325270471|ref|ZP_08137073.1| modification methylase DdeI [Prevotella multiformis DSM 16608] gi|324987194|gb|EGC19175.1| modification methylase DdeI [Prevotella multiformis DSM 16608] Length = 398 Score = 88.7 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60 + DLFCG GG+ E+ + ++ ++ TYQ N ++ D++ I Sbjct: 55 YNVLDLFCGCGGMSYGFEKA----GFDVLLGIDVWKDALVTYQHNHRSGGVLCADLSVIT 110 Query: 61 TQDIPDH------DVLLAGFPCQPFSQAG 83 +++ H DV++ G PCQ FS AG Sbjct: 111 GKEVGQHLGGKQVDVIIGGPPCQGFSVAG 139 >gi|304311589|ref|YP_003811187.1| C-5 cytosine-specific DNA methylase [gamma proteobacterium HdN1] gi|301797322|emb|CBL45542.1| C-5 cytosine-specific DNA methylase [gamma proteobacterium HdN1] Length = 387 Score = 88.7 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 +K ++F G GG+ LE + + E N ++ + NF + FGDI Sbjct: 1 MKSLEIFSGAGGLAKGLELS----GFKHAAFVEYNKHACASLSENFDRKKVFFGDIQDFD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + + DV+ G PCQPFS G Sbjct: 57 LTVLDNIDVVAGGPPCQPFSLGG 79 >gi|322382626|ref|ZP_08056496.1| DNA-methyltransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153407|gb|EFX45824.1| DNA-methyltransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 345 Score = 88.7 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF GIGGI L +E E + + + ++P+ I+ D+ + Sbjct: 1 MRKLSLFSGIGGIDL----AAKWAGIETVAFCEKESFPQQVLRKHWPDIPIYDDVCALTR 56 Query: 62 QDIPD---------HDVLLAGFPCQPFSQAG 83 + + D++ AG+PCQPFS AG Sbjct: 57 EVLEQDGIITRNRTIDLISAGYPCQPFSNAG 87 >gi|167461751|ref|ZP_02326840.1| site-specific DNA-methyltransferase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 350 Score = 88.7 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF GIGGI L +E E + + + ++P+ I+ D+ + Sbjct: 1 MRKLSLFSGIGGIDL----AAKWAGIETVAFCEKESFPQQVLRKHWPDIPIYDDVCALTR 56 Query: 62 QDIPD---------HDVLLAGFPCQPFSQAG 83 + + D++ AG+PCQPFS AG Sbjct: 57 EVLEQDGIITRNRTIDLISAGYPCQPFSNAG 87 >gi|320007884|gb|ADW02734.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC 33331] Length = 660 Score = 88.7 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 11/86 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLF G GG+ L LE+ + + + +++T+ ANFP + D+ +D Sbjct: 45 VDLFSGAGGLSLGLERA----GWTVAAAVDFDQRALRTHAANFPGMSLHMDLGNPDERDR 100 Query: 65 -------PDHDVLLAGFPCQPFSQAG 83 D++ G PCQPFS+AG Sbjct: 101 LVEMLAPAKIDLVAGGPPCQPFSRAG 126 >gi|62297515|sp|P52311|MTX2_XANOR RecName: Full=Modification methylase XorII; Short=M.XorII; AltName: Full=Cytosine-specific methyltransferase XorII Length = 424 Score = 88.7 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQD 63 DLF G GG+ L EQ + + +I+P ++ NFP + + + + Sbjct: 7 IDLFAGAGGLSLGFEQA----GFDLVAAVDIDPIHCAAHKFNFPKCATVCKSVVDVTGDE 62 Query: 64 I--------PDHDVLLAGFPCQPFSQAG 83 + D D+++ G PCQ FS G Sbjct: 63 LRRIAGIGKRDIDIVIGGAPCQGFSLIG 90 >gi|15801798|ref|NP_287816.1| putative DNA modification methyltransferase encoded within prophage CP-933R [Escherichia coli O157:H7 EDL933] gi|15831207|ref|NP_309980.1| methyltransferase [Escherichia coli O157:H7 str. Sakai] gi|217329077|ref|ZP_03445157.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. TW14588] gi|12515382|gb|AAG56430.1|AE005370_3 putative DNA modification methyltransferase encoded within prophage CP-933R [Escherichia coli O157:H7 str. EDL933] gi|13361418|dbj|BAB35376.1| putative methyltransferase [Escherichia coli O157:H7 str. Sakai] gi|217317516|gb|EEC25944.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. TW14588] gi|323179669|gb|EFZ65230.1| modification methylase XorII [Escherichia coli 1180] gi|326343203|gb|EGD66970.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. 1044] Length = 383 Score = 88.7 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + + DLF G+GG+ L + + + EI+ +++ T+ NFP + + D++ + Sbjct: 1 MNVIDLFSGVGGLSLGAARA----GFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLN 56 Query: 61 TQDIPDH-------DVLLAGFPCQPFSQAG 83 + I D ++ G PCQ FS G Sbjct: 57 AEIIKGFFKNDMPIDGIIGGPPCQGFSSIG 86 >gi|261338523|ref|ZP_05966407.1| modification methylase Sau3AI [Bifidobacterium gallicum DSM 20093] gi|270276533|gb|EFA22387.1| modification methylase Sau3AI [Bifidobacterium gallicum DSM 20093] Length = 423 Score = 88.3 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 24/105 (22%) Query: 2 LKITDLFCGIGGIRLDLE----------QTFNHRNVECFFSSEINP-------YSVKTYQ 44 ++I +LF G+GG RL L+ + ++++ P ++ + Y+ Sbjct: 4 IRIAELFAGVGGFRLGLDGYDNPEHPDFHMEPAGDFRTVWANQWEPNGQDSKQFAWRCYE 63 Query: 45 ANFP-NTLIFGDIA----KIKT--QDIPDHDVLLAGFPCQPFSQA 82 F + + DIA ++ ++IP+ D+L+ GFPCQ +S A Sbjct: 64 DRFGAGSCVNEDIAVVLDQVDAGEREIPEFDMLVGGFPCQDYSVA 108 >gi|312902257|ref|ZP_07761465.1| helix-turn-helix protein [Enterococcus faecalis TX0635] gi|283466064|emb|CBG92839.1| hypothetical protein [Enterococcus casseliflavus] gi|310634316|gb|EFQ17599.1| helix-turn-helix protein [Enterococcus faecalis TX0635] Length = 470 Score = 88.3 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 14/92 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + + F G GG+ L LE+ EI+ + T + N PN +I GDI I Sbjct: 135 YTLVETFAGAGGLSLGLEKA----GFNSVADIEIDSTACSTLKLNRPNWNVIEGDINTIA 190 Query: 61 TQDIPDH---------DVLLAGFPCQPFSQAG 83 I +H DVL G+PCQ FS AG Sbjct: 191 QNGIFNHEQFTFRGELDVLSGGYPCQSFSYAG 222 >gi|257867246|ref|ZP_05646899.1| DNA methyltransferase [Enterococcus casseliflavus EC30] gi|257873580|ref|ZP_05653233.1| DNA methyltransferase [Enterococcus casseliflavus EC10] gi|257801302|gb|EEV30232.1| DNA methyltransferase [Enterococcus casseliflavus EC30] gi|257807744|gb|EEV36566.1| DNA methyltransferase [Enterococcus casseliflavus EC10] Length = 470 Score = 88.3 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 14/92 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + + F G GG+ L LE+ EI+ + T + N PN +I GDI I Sbjct: 135 YTLVETFAGAGGLSLGLEKA----GFNSVADIEIDSTACSTLKLNRPNWNVIEGDINTIA 190 Query: 61 TQDIPDHD---------VLLAGFPCQPFSQAG 83 I +HD VL G+PCQ FS AG Sbjct: 191 QNGIFNHDQFTFRGELDVLSGGYPCQSFSYAG 222 >gi|167461724|ref|ZP_02326813.1| site-specific DNA-methyltransferase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 345 Score = 88.3 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF GIGGI L +E E + + + ++P+ I+ D+ + Sbjct: 1 MRKLSLFSGIGGIDL----AAKWTGIETVAFCEKESFPQQVLRKHWPDIPIYDDVCALTR 56 Query: 62 QDIPD---------HDVLLAGFPCQPFSQAG 83 + + D++ AG+PCQPFS AG Sbjct: 57 EVLEQDGIITRNRTIDLISAGYPCQPFSNAG 87 >gi|4033740|gb|AAC97192.1| modification methylase M.NspHI [Nostoc sp. ATCC 29106] Length = 397 Score = 88.3 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLFCG GGI L Q + S E + + T+Q NFP+ F GDI + Sbjct: 60 YNFVDLFCGAGGITQGLIQA----GFQALASVETSSIASATHQRNFPHCHHFCGDIEQFS 115 Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83 + P+ ++++ G PCQ FS AG Sbjct: 116 PKIWLKQIGSPEVNLVVGGPPCQGFSVAG 144 >gi|119511191|ref|ZP_01630308.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414] gi|119464179|gb|EAW45099.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414] Length = 432 Score = 88.3 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---------NTLIFGD 55 DLF G GG+ L EQ + S EI+P T++ NFP + Sbjct: 9 VDLFAGAGGMTLGFEQA----GFDVLASVEIDPIHCATHEFNFPFWRVLCKPVEETTSQE 64 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I + + + DV+ G PCQ FS G Sbjct: 65 IRQSSSIGDREIDVVFGGPPCQGFSLIG 92 >gi|71903439|ref|YP_280242.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS6180] gi|94988546|ref|YP_596647.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS9429] gi|94992369|ref|YP_600468.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS2096] gi|71802534|gb|AAX71887.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS6180] gi|94542054|gb|ABF32103.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS9429] gi|94545877|gb|ABF35924.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS2096] Length = 110 Score = 88.3 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 10/79 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ DLF GIGG RL L + EC EI+ ++ ++Y+A + + F DI ++ Sbjct: 4 MQFLDLFAGIGGFRLGLINQCH----ECIGFCEIDKFARQSYKAIYETEGEIEFHDIRQV 59 Query: 60 KTQDIP----DHDVLLAGF 74 QD D++ GF Sbjct: 60 TDQDFRQLRGQVDIICGGF 78 >gi|330835884|ref|YP_004410612.1| DNA-cytosine methyltransferase [Metallosphaera cuprina Ar-4] gi|329568023|gb|AEB96128.1| DNA-cytosine methyltransferase [Metallosphaera cuprina Ar-4] Length = 321 Score = 88.3 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 10/86 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 K+ DLF G GG + E + ++N + +TY +NFP T++ DI + Sbjct: 5 KVVDLFSGAGGFAKGF----KLQGFEISLAIDLNHAAARTYSSNFPTATVLEEDIRNVTG 60 Query: 62 QDI-----PDHDVLLAGFPCQPFSQA 82 +DI DV++ PC+PF+ A Sbjct: 61 KDIIGLIGSRPDVVIGSPPCEPFTGA 86 >gi|60202519|gb|AAX14651.1| BbvCI methyltransferase 2 [Brevibacillus brevis] Length = 396 Score = 88.3 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 12/90 (13%) Query: 2 LKIT--DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAK 58 +K D+F G GG L Q + E + EI+ ++ +TYQ N N L+ DI K Sbjct: 1 MKFVALDIFAGCGGFSSGLIQAGH----EVTSALEIDSWAAETYQFNHRNVNLLTEDITK 56 Query: 59 IKTQDIP-----DHDVLLAGFPCQPFSQAG 83 + + ++++ G PCQ FS +G Sbjct: 57 VDSTYFKVNFKDRVNLVVGGPPCQGFSVSG 86 >gi|197106819|ref|YP_002132196.1| DNA-cytosine methyltransferase [Phenylobacterium zucineum HLK1] gi|196480239|gb|ACG79767.1| DNA-cytosine methyltransferase [Phenylobacterium zucineum HLK1] Length = 375 Score = 88.3 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 9/86 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAK 58 + F G G RL L C F+++ +P TY+ANFP+ GD+ K Sbjct: 6 FSFYEFFAGGGMARLGL-----GARWACAFANDFDPVKAATYRANFPDAESHFREGDVWK 60 Query: 59 IKTQDIP-DHDVLLAGFPCQPFSQAG 83 + D+P D+ A PCQ FS AG Sbjct: 61 LGPVDLPGRADLAWASSPCQDFSLAG 86 >gi|153874403|ref|ZP_02002639.1| Modification methylase [Beggiatoa sp. PS] gi|152069134|gb|EDN67362.1| Modification methylase [Beggiatoa sp. PS] Length = 92 Score = 88.3 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI- 59 M+K+ DLF GIGG+ L + + + + +++ YQANF + + D++++ Sbjct: 1 MMKVIDLFAGIGGLSLGFQNA----GFKIVAAIDNWQAAMENYQANFNHDALLIDLSQMS 56 Query: 60 KTQDIPDH--DVLLAGFPCQPFSQAG 83 + D+ D+++ G PCQ F G Sbjct: 57 DYKKFKDYQPDIIIGGPPCQDFPVPG 82 >gi|111656823|ref|ZP_01407675.1| hypothetical protein SpneT_02001911 [Streptococcus pneumoniae TIGR4] gi|148994722|ref|ZP_01823806.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae SP9-BS68] gi|148999034|ref|ZP_01826467.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae SP11-BS70] gi|307067986|ref|YP_003876952.1| site-specific DNA methylase [Streptococcus pneumoniae AP200] gi|147755157|gb|EDK62211.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae SP11-BS70] gi|147927053|gb|EDK78094.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus pneumoniae SP9-BS68] gi|306409523|gb|ADM84950.1| Site-specific DNA methylase [Streptococcus pneumoniae AP200] gi|332074668|gb|EGI85142.1| modification methylase HpaII [Streptococcus pneumoniae GA17545] gi|332200781|gb|EGJ14853.1| modification methylase HpaII [Streptococcus pneumoniae GA41317] gi|332201799|gb|EGJ15869.1| modification methylase HpaII [Streptococcus pneumoniae GA47368] Length = 392 Score = 88.3 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 6/70 (8%) Query: 20 QTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKIKTQDIPD----HDVLLAG 73 + EC EI+ ++ K+Y++ F + F DI + + DV+ G Sbjct: 1 MGMEAQGHECLGFCEIDKFARKSYKSIFQTEGEIEFHDIRDVSDDEFKKLRGKVDVICGG 60 Query: 74 FPCQPFSQAG 83 FPCQ FS AG Sbjct: 61 FPCQAFSIAG 70 >gi|326564851|gb|EGE15057.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 103P14B1] Length = 288 Score = 88.3 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 9/86 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 I LF GIGG + E+ + EINP FP+ F D+ + Sbjct: 15 TIGSLFAGIGGFDVGFEKA----GFHTSWQVEINPVCRAVLSDRFPHAKQFADVKTCLPE 70 Query: 63 --DIPD---HDVLLAGFPCQPFSQAG 83 +P+ DV+ GFPCQ S AG Sbjct: 71 LLSLPNGGQVDVIAGGFPCQDVSVAG 96 >gi|116251696|ref|YP_767534.1| modification methylase [Rhizobium leguminosarum bv. viciae 3841] gi|115256344|emb|CAK07425.1| putative modification methylase [Rhizobium leguminosarum bv. viciae 3841] Length = 666 Score = 88.3 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L + +L G GGI L LE E + ++V T + N P ++ GDI ++ Sbjct: 293 LNVVELCAGAGGISLGLEDA----GYHPLALFEFDKHAVATLRLNRPLWNVVEGDIRQVD 348 Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83 D+L+ G PCQ +S G Sbjct: 349 FTAYRSVGVDLLVGGPPCQGYSIDG 373 >gi|254465219|ref|ZP_05078630.1| modification methylase XorII [Rhodobacterales bacterium Y4I] gi|206686127|gb|EDZ46609.1| modification methylase XorII [Rhodobacterales bacterium Y4I] Length = 437 Score = 88.3 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQD 63 DLF G GG+ L EQ + + E++P ++ NFP + + + D Sbjct: 7 VDLFSGAGGMSLGFEQA----GFDIVAAVELDPVHAAVHKYNFPECAVIPNSVTDVSGAD 62 Query: 64 IPD--------HDVLLAGFPCQPFSQAG 83 + + DV+ G PCQ FS G Sbjct: 63 VREAAGIGNKTVDVVFGGAPCQGFSLIG 90 >gi|284050355|ref|ZP_06380565.1| site-specific DNA-methyltransferase [Arthrospira platensis str. Paraca] Length = 371 Score = 88.3 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 11/86 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + D F G GG L + H + EI+ ++ +T+Q N PN LI GDI I + Sbjct: 1 MLDTFAGAGGFSLGFQWAGAH----IIGAIEIDEWAGETFQFNHPNAHLIKGDIKGITDE 56 Query: 63 DIPDH------DVLLAGFPCQPFSQA 82 I D ++L G PCQ FS Sbjct: 57 QILDTFGEIKPHIILGGIPCQGFSIC 82 >gi|317483873|ref|ZP_07942812.1| C-5 cytosine-specific DNA methylase [Bilophila wadsworthia 3_1_6] gi|316924890|gb|EFV46037.1| C-5 cytosine-specific DNA methylase [Bilophila wadsworthia 3_1_6] Length = 401 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 16/92 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----------FPNTL 51 +K +LF G GG+ L + E + ++ T + N +P L Sbjct: 1 MKSVELFAGAGGLALGVSLAGFTSGAVI----EWDKWACDTIRENQQRQNPLVADWP--L 54 Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D+ I D+L G PCQPFS G Sbjct: 55 HEQDVRLFDFSTIKGIDLLAGGPPCQPFSLGG 86 >gi|325857409|ref|ZP_08172464.1| DNA (cytosine-5-)-methyltransferase [Prevotella denticola CRIS 18C-A] gi|325483119|gb|EGC86099.1| DNA (cytosine-5-)-methyltransferase [Prevotella denticola CRIS 18C-A] Length = 320 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 20/92 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55 +K+ DLFCG GG+ L +Q + + + + Y+ NF + + D Sbjct: 1 MKVVDLFCGCGGLSLGFQQA----GFDIIAAYDNWEAATDVYRLNFSHPVHKADLMNAAR 56 Query: 56 ----IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I + + +++ G PCQ +S AG Sbjct: 57 ASESIMQYSPE------MIIGGPPCQDYSSAG 82 >gi|317401187|gb|EFV81833.1| hypothetical protein HMPREF0005_01193 [Achromobacter xylosoxidans C54] Length = 571 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 13/90 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 L DLF G GG L E + C + + N +++T++AN + D+ K Sbjct: 41 LTFLDLFSGCGGFSLGFEAA----GLVCKAAVDSNEAAIETFKANHTKGALGLVRDLTKF 96 Query: 60 KTQDIPD-------HDVLLAGFPCQPFSQA 82 +D+ +V++ G PCQ FS+A Sbjct: 97 SPKDLDKLLGGSVRINVIVGGPPCQGFSKA 126 >gi|296242618|ref|YP_003650105.1| DNA-cytosine methyltransferase [Thermosphaera aggregans DSM 11486] gi|296095202|gb|ADG91153.1| DNA-cytosine methyltransferase [Thermosphaera aggregans DSM 11486] Length = 461 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 17/92 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------NTL 51 + LF G GG+ L + E +++I + VKTY NF + Sbjct: 1 MLSLFSGAGGLDLGFVMSGR---FEILAANDIEEHMVKTYSINFGARIIPRLQPRLYPQV 57 Query: 52 IFGDIAKIKTQDIPD--HDVLLAGFPCQPFSQ 81 I GD++K+ + D +V++ G PCQ FS Sbjct: 58 ILGDVSKVDFSLLKDEGINVVVGGPPCQDFSI 89 >gi|307169339|gb|EFN62060.1| tRNA (cytosine-5-)-methyltransferase [Camponotus floridanus] Length = 362 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 +K+ +L+ GIGG+ L ++ + + +INP + Y+ NFP T++ +I + Sbjct: 1 MKVLELYSGIGGMHYALRES--EITAKVVAAIDINPVANAVYRENFPETILMNRNIESLN 58 Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83 Q++ D +L PCQPF++ G Sbjct: 59 AQELNKLGLDAILMSPPCQPFTRLG 83 >gi|170680813|ref|YP_001746263.1| DNA-cytosine methyltransferase family protein [Escherichia coli SMS-3-5] gi|307315390|ref|ZP_07594959.1| DNA-cytosine methyltransferase [Escherichia coli W] gi|33413740|gb|AAN28260.1| Mth [Enterobacteria phage WPhi] gi|170518531|gb|ACB16709.1| DNA-cytosine methyltransferase family protein [Escherichia coli SMS-3-5] gi|306905264|gb|EFN35809.1| DNA-cytosine methyltransferase [Escherichia coli W] gi|315063217|gb|ADT77544.1| DNA cytosine methylase [Escherichia coli W] gi|323380718|gb|ADX52986.1| DNA-cytosine methyltransferase [Escherichia coli KO11] Length = 312 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 7/84 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M + LF G GG + +++I PY+ Y N P T I GDI+ + Sbjct: 1 MPTVVSLFSGCGGSDAGVLNA----GFNVLMANDILPYARDVYLENHPETDYILGDISGL 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 Q P ++L+ +PCQ FSQ G Sbjct: 57 --QSFPSAELLIGCYPCQGFSQGG 78 >gi|329890824|ref|ZP_08269167.1| cytosine-specific methyltransferase NlaX [Brevundimonas diminuta ATCC 11568] gi|328846125|gb|EGF95689.1| cytosine-specific methyltransferase NlaX [Brevundimonas diminuta ATCC 11568] Length = 395 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 8/86 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAK 58 M + F G G R L C F+++ + TYQAN+ L GDI Sbjct: 1 MADFYEFFAGAGMARAGL-----GDGWTCQFANDFDGKKGLTYQANWGTGGELHVGDIRN 55 Query: 59 IKTQDIP-DHDVLLAGFPCQPFSQAG 83 ++TQ +P + D++ FPCQ S AG Sbjct: 56 VETQQLPGEADLIWGSFPCQDLSLAG 81 >gi|23097628|ref|NP_691094.1| site-specific DNA-methyltransferase [Oceanobacillus iheyensis HTE831] gi|22775851|dbj|BAC12129.1| site-specific DNA-methyltransferase (cytosine-specific) [Oceanobacillus iheyensis HTE831] Length = 596 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 19/97 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 K+ DLF G GG+ QT E + EIN + KTY N Sbjct: 12 YKLIDLFAGAGGLSNGFIQTGK---FEVLGAVEINKSAAKTYVENHNKNEDLIIKSGNSG 68 Query: 54 -GDIAKIKTQDI-------PDHDVLLAGFPCQPFSQA 82 D++KI + D V++ G PCQ FS A Sbjct: 69 MSDVSKIDFANFILEKKTSGDEIVVIGGPPCQGFSNA 105 >gi|290892537|ref|ZP_06555530.1| site-specific DNA-methyltransferase BsuRI [Listeria monocytogenes FSL J2-071] gi|290557846|gb|EFD91367.1| site-specific DNA-methyltransferase BsuRI [Listeria monocytogenes FSL J2-071] Length = 409 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 29/108 (26%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRN-------------------------VECFFSSEINP 37 + LF G GG+ L LE + +S+++ Sbjct: 57 NVVSLFSGAGGLDLGLELAGVYAKKEQKEQPLELLNNYPRYKEIRKESLFNIIYSNDMFK 116 Query: 38 YSVKTYQANFPNTLIFG--DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + +TY ANF + ++ DI KI + P ++++ GFPC FS AG Sbjct: 117 EANETYLANFQSNILKQELDIRKIP--NFPKCELMIGGFPCPGFSAAG 162 >gi|294668765|ref|ZP_06733858.1| modification methylase BsuRI [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309282|gb|EFE50525.1| modification methylase BsuRI [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 313 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 7/84 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M LF G GG + + ++ +++I PY+ Y AN P T I D+ K+ Sbjct: 1 MATAVSLFSGCGGSDTGVHR----LGIDILMANDIIPYARDVYLANLPQTDYILKDVRKL 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + P D+LL +PCQ FSQ G Sbjct: 57 --ESFPSADLLLGCYPCQGFSQGG 78 >gi|16272974|ref|NP_439200.1| modification methylase [Haemophilus influenzae Rd KW20] gi|1171050|sp|P45000|MTH5_HAEIN RecName: Full=Modification methylase HindV; Short=M.HindV; AltName: Full=Cytosine-specific methyltransferase HindV gi|1574073|gb|AAC22700.1| modification methylase [Haemophilus influenzae Rd KW20] Length = 304 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF G GG+ L E E + E +++ Y+ NF + + D+ K Sbjct: 1 MKCVDLFSGCGGLSLGFELA----GFEICAAFENWEKAIEIYKNNFSHPIYNIDLRNEKE 56 Query: 62 --QDIPDH--DVLLAGFPCQPFSQAG 83 + I + D+++ G PCQ FS AG Sbjct: 57 AVEKIKKYSPDLIMGGPPCQDFSSAG 82 >gi|458402|gb|AAA50432.1| M-XorII [Xanthomonas oryzae] Length = 424 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQD 63 DLF G GG+ L EQ + + +I+P ++ NFP + + + + Sbjct: 7 IDLFAGAGGLSLGFEQA----GFDLVAAVDIDPIHCAAHKFNFPKCATVCKSVVDVTRSE 62 Query: 64 I--------PDHDVLLAGFPCQPFSQAG 83 + D D+++ G PCQ FS G Sbjct: 63 LRRIAGIGKRDIDIVIGGAPCQGFSLIG 90 >gi|212633712|ref|YP_002310237.1| site-specific DNA-methyltransferase [Shewanella piezotolerans WP3] gi|212555196|gb|ACJ27650.1| Site-specific DNA-methyltransferase [Shewanella piezotolerans WP3] Length = 475 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 F G G+ L +E++ + + E++ Y +T N P+T + DI K ++ Sbjct: 76 LSFFSGAMGLDLGIEKS----GFDVRLACEVDKYCRQTIALNKPDTALLTDINKYSANEV 131 Query: 65 P---------DHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS AG Sbjct: 132 RLAAGLGKDEEIDLIMGGPPCQAFSTAG 159 >gi|320326171|gb|EFW82226.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea str. B076] Length = 404 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPN----TLIF 53 ++ +LF G GG+ + E E E + ++ T + N +P L Sbjct: 1 MRSVELFAGAGGLAMGCEIA----GFEHLAVVEWDKWACDTVRENQKRGYPILAGWNLHE 56 Query: 54 GDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 GD+ IP D ++L G PCQPFS G Sbjct: 57 GDVRAFDWSTIPQDIELLAGGPPCQPFSIGG 87 >gi|217965593|ref|YP_002351271.1| modification methylase (cytosine-specific methyltransferase) [Listeria monocytogenes HCC23] gi|217334863|gb|ACK40657.1| modification methylase (cytosine-specific methyltransferase) [Listeria monocytogenes HCC23] gi|307569856|emb|CAR83035.1| methyltransferase [Listeria monocytogenes L99] Length = 411 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 29/108 (26%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRN-------------------------VECFFSSEINP 37 + LF G GG+ L LE + +S+++ Sbjct: 57 NVVSLFSGAGGLDLGLELAGVYAKKEQKEQPLELLNNYPRYKEIRKESLFNIIYSNDMFK 116 Query: 38 YSVKTYQANFPNTLIFG--DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + +TY ANF + ++ DI KI + P ++++ GFPC FS AG Sbjct: 117 EANETYLANFQSNILKQELDIRKIP--NFPKCELMIGGFPCPGFSAAG 162 >gi|228982443|ref|ZP_04142702.1| Cytosine-specific methyltransferase [Bacillus thuringiensis Bt407] gi|228776626|gb|EEM24934.1| Cytosine-specific methyltransferase [Bacillus thuringiensis Bt407] Length = 418 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 4/79 (5%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG G ++ H ++ + NPY+VKTY + DI KI DI Sbjct: 19 VDLFCGAGVGACGVKLAGYHM----AYAVDNNPYAVKTYNKMIGPHAVLADIRKINPNDI 74 Query: 65 PDHDVLLAGFPCQPFSQAG 83 PDHD ++A C+ FS AG Sbjct: 75 PDHDFMIATPVCKSFSVAG 93 >gi|212632918|ref|YP_002309443.1| site-specific DNA-methyltransferase [Shewanella piezotolerans WP3] gi|212554402|gb|ACJ26856.1| Site-specific DNA-methyltransferase (cytosine-specific) [Shewanella piezotolerans WP3] Length = 412 Score = 87.9 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Query: 22 FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIP-DHDVLLAGFPCQPF 79 +E F +E++ ++ KT + N P+ ++ GDI+KI I D DVL GFPCQ F Sbjct: 93 MEQAGLESIFLNEMDKHACKTLRHNRPDWNVVEGDISKIDFSVIKQDVDVLTGGFPCQAF 152 Query: 80 SQAG 83 S AG Sbjct: 153 SYAG 156 >gi|172039658|ref|YP_001806159.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] gi|171701112|gb|ACB54093.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142] Length = 321 Score = 87.9 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--KI 59 +K+ DLF G GG+ L + + + VK YQ NF + + D++ ++ Sbjct: 3 MKVIDLFAGCGGLSLGFQNA----GYTILAAYDNWEPVVKIYQKNFKHPIYKWDLSRYEL 58 Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83 ++ + D+++ G PCQ FS AG Sbjct: 59 YLEEFKSLNPDLIMGGPPCQDFSSAG 84 >gi|17229768|ref|NP_486316.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] gi|17131367|dbj|BAB73975.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] Length = 431 Score = 87.9 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 19/91 (20%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 DLF G GG+ L EQ + + EI+P ++ NFP + Sbjct: 20 VDLFAGAGGMSLGFEQA----GFDVLAAVEIDPIHCAVHEYNFPFCSVLCKSVEETTGKE 75 Query: 54 -GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D +KI Q+I DV++ G PCQ FS G Sbjct: 76 IRDRSKINNQEI---DVIICGSPCQGFSLMG 103 >gi|304389869|ref|ZP_07371828.1| possible DNA-cytosine methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327045|gb|EFL94284.1| possible DNA-cytosine methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 503 Score = 87.5 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L ++ ++SE++P++ + + N P GDI + Sbjct: 4 LTLGSLFDGSGGFPL----AAKMVGIKPMWASEVDPFAFRVTKKNLPEVRHVGDINLLDG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + DV+ G PCQ S AG Sbjct: 60 GRLQPVDVITFGSPCQDLSIAG 81 >gi|298385398|ref|ZP_06994956.1| C-5 cytosine-specific DNA methylase superfamily [Bacteroides sp. 1_1_14] gi|298261539|gb|EFI04405.1| C-5 cytosine-specific DNA methylase superfamily [Bacteroides sp. 1_1_14] Length = 420 Score = 87.5 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 7/85 (8%) Query: 2 LKIT--DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K+ LF G + + F EINP+ + + FPN+ + DI K Sbjct: 1 MKLVHGSLFSG---FD-APSVAASWMGWKNAFHCEINPFCNEILKYWFPNSEHYEDITKT 56 Query: 60 KTQDIP-DHDVLLAGFPCQPFSQAG 83 DVL GFPCQPFS AG Sbjct: 57 DFSQWKGRIDVLTGGFPCQPFSLAG 81 >gi|284989342|ref|YP_003407896.1| DNA-cytosine methyltransferase [Geodermatophilus obscurus DSM 43160] gi|284062587|gb|ADB73525.1| DNA-cytosine methyltransferase [Geodermatophilus obscurus DSM 43160] Length = 671 Score = 87.5 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 11/86 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLF G GG+ L LEQ FS++ +P +V+T+ +F + D+A + Sbjct: 51 ADLFSGAGGMSLGLEQA----GFRVVFSADHDPEAVETHAHHFGGMSVDWDLADADAVER 106 Query: 65 -------PDHDVLLAGFPCQPFSQAG 83 ++L G PCQPFS+AG Sbjct: 107 VAATLRAVGVELLAGGPPCQPFSKAG 132 >gi|220930206|ref|YP_002507115.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] gi|220000534|gb|ACL77135.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10] Length = 719 Score = 87.5 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L +E ++SEI P+ ++ P +GDI K+ Sbjct: 4 LTLGSLFDGSGGFPLG----GLLCGIEPLWASEIEPFPIRVTTKRIPQMKHYGDINKLNG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++P D++ G PC S AG Sbjct: 60 AELPPVDIITFGSPCTDMSVAG 81 >gi|260580130|ref|ZP_05847960.1| site-specific DNA-methyltransferase (cytosine-specific) [Haemophilus influenzae RdAW] gi|260093414|gb|EEW77347.1| site-specific DNA-methyltransferase (cytosine-specific) [Haemophilus influenzae RdAW] Length = 304 Score = 87.5 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLF G GG+ L E E + E +++ Y+ NF + + D+ K Sbjct: 1 MKCVDLFSGCGGLSLGFELA----GFEICAAFENWEKAIEIYKNNFSHPIYNIDLRNEKE 56 Query: 62 --QDIPDH--DVLLAGFPCQPFSQAG 83 + I + D+++ G PCQ FS AG Sbjct: 57 AVEKIKKYSPDLIMGGPPCQDFSSAG 82 >gi|316931670|ref|YP_004106652.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1] gi|315599384|gb|ADU41919.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1] Length = 390 Score = 87.5 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF G+GG+ L L + + + SEI + + F GD+A +K+ Sbjct: 1 MKIAGLFAGVGGLELGLHRAGH----DTLVFSEIWEPAGAVLERRFGGVPNVGDVASLKS 56 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 +P D D++ AGFPCQ SQAG Sbjct: 57 --LPADVDLMTAGFPCQDLSQAG 77 >gi|209525992|ref|ZP_03274525.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209493518|gb|EDZ93840.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 430 Score = 87.5 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 15/90 (16%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQD 63 DLF G GG+ L LE + + E + + NFP I DI+K+ + + Sbjct: 20 IDLFAGCGGMSLGLEAA----GFDVAVAVEFDAVHCLVHHFNFPYCHTICRDISKVTSAE 75 Query: 64 IPD----------HDVLLAGFPCQPFSQAG 83 I + D++ G PCQ FS G Sbjct: 76 ILEQLQLKYQDTQVDLIAGGPPCQGFSHIG 105 >gi|75906326|ref|YP_320622.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] gi|75700051|gb|ABA19727.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] Length = 431 Score = 87.5 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 19/91 (20%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 DLF G GG+ L EQ + + EI+P ++ NFP + Sbjct: 20 VDLFAGAGGMTLGFEQA----GFDVLAAVEIDPIHCAVHEYNFPFCSVLCKSVEETTGKE 75 Query: 54 -GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D +KI QDI DV++ G PCQ FS G Sbjct: 76 IRDRSKINNQDI---DVIICGSPCQGFSLMG 103 >gi|42779474|ref|NP_976721.1| DNA-cytosine methyltransferase [Bacillus cereus ATCC 10987] gi|42735390|gb|AAS39329.1| DNA-cytosine methyltransferase [Bacillus cereus ATCC 10987] Length = 719 Score = 87.5 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L +E ++SEI P+ ++ P +GDI K+ Sbjct: 4 LTLGSLFDGSGGFPLG----GLLCGIEPLWASEIEPFPIRVTTKRIPQMKHYGDINKLNG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 ++P D++ G PC S AG Sbjct: 60 AELPPVDIITFGSPCTDMSVAG 81 >gi|158335733|ref|YP_001516905.1| DNA-cytosine methyltransferase [Acaryochloris marina MBIC11017] gi|158305974|gb|ABW27591.1| DNA-cytosine methyltransferase [Acaryochloris marina MBIC11017] Length = 397 Score = 87.5 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 5/80 (6%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQD 63 +LF G GG+ LE+ V+ E N + T N+ L+ DI K Sbjct: 7 LELFTGAGGLAKGLEKA----GVQHTAFVEWNKDACITLANNYSAQLVHNVDIRTFKFSQ 62 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D++ G PCQPFS G Sbjct: 63 FGHVDIVSGGPPCQPFSMGG 82 >gi|221232312|ref|YP_002511465.1| DNA methylase [Streptococcus pneumoniae ATCC 700669] gi|220674773|emb|CAR69346.1| putative DNA methylase [Streptococcus pneumoniae ATCC 700669] Length = 369 Score = 87.5 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 5/67 (7%) Query: 22 FNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKIKTQDIP---DHDVLLAGFPC 76 EC EI+ ++ +Y+A + DI + I DV+ GFPC Sbjct: 1 MESAGHECIGFCEIDKFARASYKAIHDTKGEIELHDITTVSDDTIRGIGHVDVICGGFPC 60 Query: 77 QPFSQAG 83 Q FS AG Sbjct: 61 QAFSIAG 67 >gi|171911881|ref|ZP_02927351.1| DNA-cytosine methyltransferase [Verrucomicrobium spinosum DSM 4136] Length = 330 Score = 87.5 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 9/80 (11%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63 DLF G GG+ L E + E + + +Y+ N + + Sbjct: 23 IDLFAGCGGLALGFESA----GISTIGF-EKDRDACASYRRNLGGECFE---TLLTPESQ 74 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 P D+++ G PCQPFS G Sbjct: 75 FPKCDLIIGGPPCQPFSVGG 94 >gi|39933426|ref|NP_945702.1| site-specific DNA-methyltransferase [Rhodopseudomonas palustris CGA009] gi|192288783|ref|YP_001989388.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1] gi|39647272|emb|CAE25793.1| possible site-specific DNA-methyltransferase [Rhodopseudomonas palustris CGA009] gi|192282532|gb|ACE98912.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1] Length = 390 Score = 87.5 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF G+GG+ L L + + + SEI + + F GD+A +K+ Sbjct: 1 MKVAGLFAGVGGLELGLHRAGH----DTLVFSEIWDPAGAVLERRFGGVPNVGDVASLKS 56 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 +P D D++ AGFPCQ SQAG Sbjct: 57 --LPADVDLMTAGFPCQDLSQAG 77 >gi|94994344|ref|YP_602442.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10750] gi|94547852|gb|ABF37898.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10750] Length = 119 Score = 87.5 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +K DLF GIGG RL L + EC EI+ ++ ++Y+A + + F DI ++ Sbjct: 4 MKFLDLFAGIGGFRLGLINQCH----ECIGFCEIDKFARQSYKAIYETEGEIEFHDIRQV 59 Query: 60 KTQDIP----DHDVLLAGF 74 QD D++ GF Sbjct: 60 TDQDFRQLRGQVDIICGGF 78 >gi|254412384|ref|ZP_05026158.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196180694|gb|EDX75684.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 221 Score = 87.5 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 17/96 (17%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-----ANFPNTLIFGD 55 ML LF G GG+ + + Q E EI+PY KT + N LI D Sbjct: 1 MLSALSLFSGAGGMDIGVRQA----GFEILADIEIDPYCCKTIRSAMDRENLRTLLIEKD 56 Query: 56 IAKIKTQDI--------PDHDVLLAGFPCQPFSQAG 83 I ++ + D D+L G PCQ FSQAG Sbjct: 57 IKQVDPSHLIRELTIQPGDLDLLFGGSPCQSFSQAG 92 >gi|307941961|ref|ZP_07657314.1| modification methylase NgoPII [Roseibium sp. TrichSKD4] gi|307774867|gb|EFO34075.1| modification methylase NgoPII [Roseibium sp. TrichSKD4] Length = 390 Score = 87.5 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K LF G GG+ L E + + + + Y+V +Y N D+ ++ + Sbjct: 1 MKAISLFSGCGGMDLGFENA----GISILAAYDSDSYAVSSYNRNVKLCARRIDVNRLDS 56 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 IP + D+L+A PCQ FS AG Sbjct: 57 --IPSNFDILIATPPCQGFSTAG 77 >gi|239812977|ref|YP_002941924.1| DNA-cytosine methyltransferase [Geobacillus sp. WCH70] gi|239809042|gb|ACS26105.1| DNA-cytosine methyltransferase [Geobacillus sp. WCH70] Length = 370 Score = 87.1 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 14/93 (15%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M F G GG+ L +++ S EI +T + NF ++ GDI + Sbjct: 1 MANAISFFAGAGGLDLGIKRA----GFNILLSVEIEETYCQTLRQNFEGLNVVCGDIMEY 56 Query: 60 KTQDI---------PDHDVLLAGFPCQPFSQAG 83 + + + D+++ G PCQ FS AG Sbjct: 57 SRERVYQEAGLAEHEEVDLMIGGSPCQSFSTAG 89 >gi|326381717|ref|ZP_08203411.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL B-59395] gi|326199964|gb|EGD57144.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL B-59395] Length = 356 Score = 87.1 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 10/87 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK- 60 DLF G GG+ L+Q+ +EC +S+ ++KTY N P+ I D+ K+ Sbjct: 10 TFIDLFAGAGGLSWGLQQS----GMECLLASDYWGDALKTYSHNMPDHPTIECDVRKLTM 65 Query: 61 ---TQDIPD-HDVLLAGFPCQPFSQAG 83 Q +P+ D ++ G PCQ +S G Sbjct: 66 PKLAQLLPEKPDWVVGGPPCQGYSTVG 92 >gi|121592996|ref|YP_984892.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42] gi|120605076|gb|ABM40816.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42] Length = 449 Score = 87.1 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 16/97 (16%) Query: 2 LKITDLFCGIGGIRLDLEQT---FNHRNVECFFSSEINP-----YSVKTYQANFP-NTLI 52 L++ +LF G+GG R LEQ + ++++ P ++ + Y+A + L+ Sbjct: 12 LRVMELFAGVGGFRQGLEQVRTPAQQAAFKVVWANQYEPASKKQWAAEVYRARWGVQDLV 71 Query: 53 FGDIAKIKTQ-------DIPDHDVLLAGFPCQPFSQA 82 DI ++ + D DVL+ GFPCQ +S A Sbjct: 72 NEDIFEVLQEPALMASLDALCPDVLVGGFPCQDYSVA 108 >gi|167644366|ref|YP_001682029.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] gi|167644566|ref|YP_001682229.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] gi|167346796|gb|ABZ69531.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] gi|167346996|gb|ABZ69731.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] Length = 440 Score = 87.1 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 10/84 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIA--KIK 60 + DLF G GG+ Q S+ +P ++ TY NFP I+GD+ ++K Sbjct: 10 VVDLFAGAGGLSEGFRQA----GFSIIAGSDNDPDALATYATNFPEARSIWGDVRTPEVK 65 Query: 61 TQDI---PDHDVLLAGFPCQPFSQ 81 Q + +++ G PCQ FSQ Sbjct: 66 AQILDAARSASIIVGGPPCQAFSQ 89 >gi|328710652|ref|XP_001949338.2| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Acyrthosiphon pisum] Length = 328 Score = 87.1 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 4/85 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 +++ + F GIGG+ L++ N N E + +IN + Y+ FP+T + +I + Sbjct: 1 MRVIEFFSGIGGMHFALKE-CNLENFEVVLAVDINTVANAVYRHFFPSTNLRDLNILSLS 59 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 + D+LL PCQPF++ G Sbjct: 60 PEQFDAYHPDILLMSPPCQPFTRNG 84 >gi|294673126|ref|YP_003573742.1| C-5 cytosine-specific family DNA methylase [Prevotella ruminicola 23] gi|294473536|gb|ADE82925.1| DNA methylase, C-5 cytosine-specific family [Prevotella ruminicola 23] Length = 342 Score = 87.1 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 9/83 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 KI +F G+GGI H + F+++ + +++AN+P+ ++ IA + Sbjct: 4 KIVSIFSGVGGIDTGFS----HAGFQTVFANDNWQNACDSFKANYPDAEVVCASIADVDF 59 Query: 62 QDIP----DHDVLLAGFPCQPFS 80 ++I D D L+ G PC PFS Sbjct: 60 KEIKKKYGDIDGLVGGPPCPPFS 82 >gi|40063394|gb|AAR38205.1| C-5 cytosine-specific DNA methylase [uncultured marine bacterium 580] Length = 435 Score = 87.1 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 26/107 (24%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV---------------ECFFSSEINP-----YSVK 41 LK+ +LF G+GG RL LE +++ E +S++ P + Sbjct: 4 LKVAELFAGVGGFRLGLEGWKKNKDFFSASSDYKKKMPPLFEVVWSNQFEPLTKSQPASD 63 Query: 42 TYQANFPNTLIFG---DIAKI---KTQDIPDHDVLLAGFPCQPFSQA 82 Y+ F ++ DI + IP HD+L+ GFPCQ +S A Sbjct: 64 IYEQRFNSSTSLHSRVDIEHLVKNDIHSIPFHDLLVGGFPCQDYSVA 110 >gi|167648711|ref|YP_001686374.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] gi|167351141|gb|ABZ73876.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] Length = 375 Score = 87.1 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAKIK 60 + F G G RL L + C F+++ +P TY+ N + GD+ KI Sbjct: 9 FYEFFAGGGMARLGLGEA-----WTCAFANDFDPVKAATYRDNHKDAATHFHEGDVWKIA 63 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 D+P D+ A PCQ FS AG Sbjct: 64 AADLPGQADLAWASSPCQDFSLAG 87 >gi|229143653|ref|ZP_04272076.1| DNA-cytosine methyltransferase [Bacillus cereus BDRD-ST24] gi|228639832|gb|EEK96239.1| DNA-cytosine methyltransferase [Bacillus cereus BDRD-ST24] Length = 538 Score = 87.1 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 14/89 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAK 58 +K+ DLFCG GG E+ E + +I ++ T+ N N GDI + Sbjct: 1 MKVIDLFCGAGGFSEGFERA----GFEIVRAYDIWAPAILTHNQNHGNGKQIAFKGDIYE 56 Query: 59 IK-------TQDIPDHDVLLAGFPCQPFS 80 I + IPD +V++ PC FS Sbjct: 57 ISMLDNEEFEKWIPDTEVIIGSPPCIAFS 85 >gi|219871000|ref|YP_002475375.1| cytosine specific DNA methyltransferase (BSP6IM) [Haemophilus parasuis SH0165] gi|219691204|gb|ACL32427.1| cytosine specific DNA methyltransferase (BSP6IM) [Haemophilus parasuis SH0165] Length = 295 Score = 87.1 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 28/57 (49%), Positives = 36/57 (63%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++C SEI+P TYQ F + GD+ +I Q +PD DV+LAGFPCQ FS AG Sbjct: 1 MQCVGHSEIDPEPDTTYQIFFNDRNNLGDLTQIDIQKLPDFDVMLAGFPCQTFSIAG 57 >gi|310828705|ref|YP_003961062.1| hypothetical protein ELI_3130 [Eubacterium limosum KIST612] gi|308740439|gb|ADO38099.1| Phage-related protein [Eubacterium limosum KIST612] Length = 262 Score = 86.7 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGGI L E E E + K + ++P+ + D+ + Sbjct: 6 LTHLSLFTGIGGIDLAAEWA----GFETVGQCEFADFPTKVLKKHWPDVPRWRDVKDVTR 61 Query: 62 QDIPD------HDVLLAGFPCQPFSQAG 83 + D++ GFPCQP S G Sbjct: 62 ESFEQWTGLQTVDLISGGFPCQPHSVIG 89 >gi|330900978|gb|EGH32397.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 340 Score = 86.7 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 17/92 (18%) Query: 2 LKI----TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DI 56 +K DLF G GG+ L+ E + EI+ + KT+ N + + G DI Sbjct: 1 MKFTFTAIDLFSGCGGLTQGLKDA----GYEVKGAVEIDSKARKTFTMNHADVPLVGEDI 56 Query: 57 AKIKTQD--------IPDHDVLLAGFPCQPFS 80 ++ + I + D+L PCQ FS Sbjct: 57 RQLSAETLMRESGLAIEELDLLAGCPPCQGFS 88 >gi|221236677|ref|YP_002519114.1| DNA-cytosine methyltransferase [Caulobacter crescentus NA1000] gi|220965850|gb|ACL97206.1| DNA-cytosine methyltransferase [Caulobacter crescentus NA1000] Length = 381 Score = 86.7 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 8/81 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAKI 59 + + F G G RL L + C F+++ +P TY+ANF GD+ + Sbjct: 15 RFLEFFAGGGMARLGL-----GADWACAFANDFDPVKAATYRANFADAGKHFQEGDVFAL 69 Query: 60 KTQDIPDHDVLLAGFPCQPFS 80 + +PD D+ A PCQ FS Sbjct: 70 SAERLPDADLAWASSPCQDFS 90 >gi|16127856|ref|NP_422420.1| DNA-cytosine methyltransferase [Caulobacter crescentus CB15] gi|13425378|gb|AAK25588.1| DNA-cytosine methyltransferase [Caulobacter crescentus CB15] Length = 374 Score = 86.7 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 8/81 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAKI 59 + + F G G RL L + C F+++ +P TY+ANF GD+ + Sbjct: 8 RFLEFFAGGGMARLGL-----GADWACAFANDFDPVKAATYRANFADAGKHFQEGDVFAL 62 Query: 60 KTQDIPDHDVLLAGFPCQPFS 80 + +PD D+ A PCQ FS Sbjct: 63 SAERLPDADLAWASSPCQDFS 83 >gi|29566291|ref|NP_817858.1| gp7 [Mycobacterium phage Corndog] gi|29425016|gb|AAN01939.1| gp7 [Mycobacterium phage Corndog] Length = 196 Score = 86.7 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 7/85 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 +I LF G G + +EQ + E + + +P GD+ ++ Sbjct: 8 RIGSLFSGSGMLDRAVEQA---TGGRVVWHCENDRAAKLVLAERWPGVPNLGDVRRVNWS 64 Query: 63 DIP----DHDVLLAGFPCQPFSQAG 83 I D+L GFPC S AG Sbjct: 65 RIRWSLGPVDILCGGFPCTDISPAG 89 >gi|325478716|gb|EGC81827.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus prevotii ACS-065-V-Col13] Length = 480 Score = 86.7 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF G GG L ++ ++SE+ P+ ++ Q N P GDI I Sbjct: 5 LRLGSLFDGSGGFPL----AAIFCEIKPIWASEVEPFPIRVTQKNLPQVKHLGDINDIDG 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 I D++ G PCQ S AG Sbjct: 61 SGIEPVDIISFGSPCQDLSIAG 82 >gi|172038906|ref|YP_001805407.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] gi|171700360|gb|ACB53341.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] Length = 427 Score = 86.7 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 DLF G+GG+ L EQ + S E++P ++ NFP T I + +I Sbjct: 9 VDLFAGVGGMTLGFEQA----GFDVLASVELDPIHCSIHRYNFPFWTTICASVTRITANQ 64 Query: 64 IPD--------HDVLLAGFPCQPFSQAG 83 I + DV+ G PCQ FS G Sbjct: 65 IRELSSIQNQPIDVVFGGPPCQGFSLMG 92 >gi|119719333|ref|YP_919828.1| DNA-cytosine methyltransferase [Thermofilum pendens Hrk 5] gi|119524453|gb|ABL77825.1| DNA-cytosine methyltransferase [Thermofilum pendens Hrk 5] Length = 320 Score = 86.7 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 14/89 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 L + DLF G GG + + E++P + + ++ NFP +F D+ ++ Sbjct: 5 LTVLDLFAGAGGFSRGFAE----EGFSIVGAVEVDPLAAEAFRLNFPGARVFEEDVREVH 60 Query: 61 TQDI-------PDHDVLLAGFPCQPFSQA 82 ++DI P V++ G PC+ +S+A Sbjct: 61 SRDILLGLGFRPR--VIIGGPPCEAYSRA 87 >gi|300867524|ref|ZP_07112175.1| putative Modification methylase HgiDII [Oscillatoria sp. PCC 6506] gi|300334518|emb|CBN57345.1| putative Modification methylase HgiDII [Oscillatoria sp. PCC 6506] Length = 361 Score = 86.7 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 12/88 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 +L DLFCG GG+ L + N+ + + NP KTY+ N PN ++ DIA + Sbjct: 18 LLTAVDLFCGCGGVTEGL----TNHNIRVVAAVDNNPIVCKTYKINHPNVNLYESDIALL 73 Query: 60 KTQDIP-------DHDVLLAGFPCQPFS 80 DI D D+L+ PCQPFS Sbjct: 74 DPMDIRQNDLKGADVDILVVCAPCQPFS 101 >gi|323694940|ref|ZP_08109090.1| type II DNA modification methyltransferase [Clostridium symbiosum WAL-14673] gi|323501030|gb|EGB16942.1| type II DNA modification methyltransferase [Clostridium symbiosum WAL-14673] Length = 338 Score = 86.7 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGG+ L E E E Y + ++P+ F DI Sbjct: 4 LTHVSLFSGIGGLDLAAEAA----GFETVCQCEWADYPYSVLERHWPDVPKFRDITTFTK 59 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + ++ GFPCQPFS AG Sbjct: 60 EAFFEKTGLETVTIISGGFPCQPFSTAG 87 >gi|192292294|ref|YP_001992899.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1] gi|192286043|gb|ACF02424.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1] Length = 500 Score = 86.7 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 18/95 (18%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAK 58 ++ DLF G GG+ L + E + E +P + K++ NF P + DI+ Sbjct: 21 RVLDLFSGCGGLSLGF----HAVGCEIVAAVEHDPDAAKSHGLNFHAGSPVHMEPRDISS 76 Query: 59 IKTQDIPD----------HDVLLAGFPCQPFSQAG 83 ++ DV++ G PCQ F++ G Sbjct: 77 TPPANLTKALGLGHHSLAFDVVIGGPPCQAFARVG 111 >gi|149373121|ref|ZP_01892009.1| site-specific DNA-methyltransferase [unidentified eubacterium SCB49] gi|149354269|gb|EDM42838.1| site-specific DNA-methyltransferase [unidentified eubacterium SCB49] Length = 735 Score = 86.7 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 14/96 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV-ECFFSSEINPYSVKTY--QANF----PNTLIFG 54 DLF G GG Q ++ + +++IN T+ + N + Sbjct: 119 FTFVDLFAGAGGFSEGFLQAEHNNKFFDFVVANDINENCELTHVVRYNHQLGLDAEFLKQ 178 Query: 55 DIAK-------IKTQDIPDHDVLLAGFPCQPFSQAG 83 DI + ++ + DV+ G PCQ FS AG Sbjct: 179 DITEPDFLDNLLEKINGRKIDVVCGGPPCQSFSLAG 214 >gi|218895987|ref|YP_002444398.1| modification methylase DdeI [Bacillus cereus G9842] gi|218542827|gb|ACK95221.1| modification methylase DdeI [Bacillus cereus G9842] Length = 468 Score = 86.7 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 9/84 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAKI 59 DLFCG GG+ + LEQ N E F+ + + + K+Y N P ++ GDI + Sbjct: 92 FIDLFCGAGGLSVGLEQ----YNFEPIFALDFDLSASKSYLFNRPFLSESSFYNGDIKEF 147 Query: 60 KT-QDIPDHDVLLAGFPCQPFSQA 82 D+P V++ G PCQ FS A Sbjct: 148 LLHNDLPKAPVIVGGPPCQGFSNA 171 >gi|291564095|emb|CBL42911.1| Site-specific DNA methylase [butyrate-producing bacterium SS3/4] Length = 361 Score = 86.7 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIG L + + ++SEI + + +FP+ + GDI K+ Sbjct: 4 IKLGSLFDGIGVFPLAASRC----GIRPVWASEIEKAPISITKRHFPDMVHLGDITKVDG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP ++ G PCQ S G Sbjct: 60 GKIPPVHIITFGSPCQNLSLIG 81 >gi|291544225|emb|CBL17334.1| DNA-methyltransferase (dcm) [Ruminococcus sp. 18P13] Length = 407 Score = 86.4 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 13/92 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 + +LF G GG+ L +E+ E++ + T + N P +I DIA + Sbjct: 73 IFSTIELFAGAGGLALGVEKA----GFNTLGLVEVDKDASDTLRKNRPEWRVINDDIANV 128 Query: 60 KTQDIPDH--------DVLLAGFPCQPFSQAG 83 D+ ++ D+L G PCQ FS AG Sbjct: 129 SCLDLQEYFGLKQGELDLLSGGAPCQSFSYAG 160 >gi|238923216|ref|YP_002936731.1| DNA-cytosine methyltransferase [Eubacterium rectale ATCC 33656] gi|238925032|ref|YP_002938548.1| DNA-cytosine methyltransferase [Eubacterium rectale ATCC 33656] gi|238874890|gb|ACR74597.1| DNA-cytosine methyltransferase [Eubacterium rectale ATCC 33656] gi|238876707|gb|ACR76414.1| DNA-cytosine methyltransferase [Eubacterium rectale ATCC 33656] Length = 361 Score = 86.4 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIG L + + ++SEI + + +FP+ + GDI K+ Sbjct: 4 IKLGSLFDGIGVFPLAASRC----GIRPVWASEIEKAPISITKRHFPDMVHLGDITKVDG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP ++ G PCQ S G Sbjct: 60 GKIPPVHIITFGSPCQNLSLIG 81 >gi|157953197|ref|YP_001498088.1| hypothetical protein AR158_C006R [Paramecium bursaria Chlorella virus AR158] gi|156067845|gb|ABU43552.1| hypothetical protein AR158_C006R [Paramecium bursaria Chlorella virus AR158] Length = 333 Score = 86.4 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ LF G GG ++ ++ SE++ ++KT+ N P+ + GD++ I Sbjct: 4 LRAISLFAGAGGDTFGMKMA----GIDVVAFSELDIDAIKTHNRNNPDCVALGDVSLIDE 59 Query: 62 QDIP----DHDVLLAGFPCQPFSQAG 83 + + D++ AGFPCQ FS AG Sbjct: 60 TMLSPFVDNVDIIFAGFPCQGFSNAG 85 >gi|160893193|ref|ZP_02073981.1| hypothetical protein CLOL250_00739 [Clostridium sp. L2-50] gi|160945817|ref|ZP_02093043.1| hypothetical protein FAEPRAM212_03350 [Faecalibacterium prausnitzii M21/2] gi|156865276|gb|EDO58707.1| hypothetical protein CLOL250_00739 [Clostridium sp. L2-50] gi|158443548|gb|EDP20553.1| hypothetical protein FAEPRAM212_03350 [Faecalibacterium prausnitzii M21/2] Length = 361 Score = 86.4 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIG L + + ++SEI + + +FP+ + GDI K+ Sbjct: 4 IKLGSLFDGIGVFPLAASRC----GIRPVWASEIEKAPISITKRHFPDMVHLGDITKVDG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP ++ G PCQ S G Sbjct: 60 GKIPPVHIITFGSPCQNLSLIG 81 >gi|323484993|ref|ZP_08090347.1| hypothetical protein HMPREF9474_02098 [Clostridium symbiosum WAL-14163] gi|323401735|gb|EGA94079.1| hypothetical protein HMPREF9474_02098 [Clostridium symbiosum WAL-14163] Length = 361 Score = 86.4 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIG L + + ++SEI + + +FP+ + GDI K+ Sbjct: 4 IKLGSLFDGIGVFPLAASRC----GIRPVWASEIEKAPISITKRHFPDMVHLGDITKVDG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP ++ G PCQ S G Sbjct: 60 GKIPPVHIITFGSPCQNLSLIG 81 >gi|284052085|ref|ZP_06382295.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] Length = 382 Score = 86.4 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKTQD 63 +LF G GG+ LE +E EI+ + T N+ P + + DI + + Sbjct: 7 LELFAGAGGLAKGLEMA----GIEHKALVEIDHNACLTLAGNYKPELIYYVDIRSLNFAE 62 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D++ G PCQPFS G Sbjct: 63 FGHIDLISGGPPCQPFSMGG 82 >gi|223983703|ref|ZP_03633876.1| hypothetical protein HOLDEFILI_01157 [Holdemania filiformis DSM 12042] gi|223964334|gb|EEF68673.1| hypothetical protein HOLDEFILI_01157 [Holdemania filiformis DSM 12042] Length = 340 Score = 86.4 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 32/88 (36%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGG+ L E E Y + ++P F DI Sbjct: 4 LTHVSLFSGIGGLDLAAEAA----GFRTVCQCEWADYPYSVLEKHWPEVPRFRDITTFTK 59 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + V+ GFPCQPFS AG Sbjct: 60 EAFFEKTGLETVTVISGGFPCQPFSTAG 87 >gi|134287405|ref|YP_001110788.1| putative cytosine-C5 specific DNA methylase [Clostridium phage phiC2] gi|93117243|gb|ABE99533.1| putative cytosine-C5 specific DNA methylase [Clostridium phage phiC2] Length = 316 Score = 86.4 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Query: 22 FNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAKIKTQDIPDHDVLLAGFPCQP 78 +C E + ++ +Y A + DI +I+T++IP DV GFPCQ Sbjct: 1 MEKAGHKCLGHCEYDKFANLSYNAMHKPKEDEWFERDIREIRTENIPRADVWCFGFPCQD 60 Query: 79 FSQAG 83 S AG Sbjct: 61 ISVAG 65 >gi|320321292|gb|EFW77421.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea str. B076] Length = 410 Score = 86.4 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 13/89 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L DLF G GG+ L + +++EI+P +TY AN P+T + DI ++ Sbjct: 11 LTSLDLFAGAGGLSEGLREA----GFTSLYANEISPRYAQTYGANHPSTHVDNQDIREVD 66 Query: 61 TQDIP--------DHDVLLAGFPCQPFSQ 81 + + + D++ G PCQ FS Sbjct: 67 ARKVRKSLGLKRGELDLIAGGPPCQGFSI 95 >gi|189459597|ref|ZP_03008382.1| hypothetical protein BACCOP_00223 [Bacteroides coprocola DSM 17136] gi|189433679|gb|EDV02664.1| hypothetical protein BACCOP_00223 [Bacteroides coprocola DSM 17136] Length = 387 Score = 86.4 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 16/94 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-----NTLIFGDI 56 + DLF G GG+ + + ++EI+ + T + N I GDI Sbjct: 137 MNFVDLFAGCGGMSEGFIMS----GFQLIAANEIDKSIMATNRYNHSQYAPAENFILGDI 192 Query: 57 AKIKTQDI-------PDHDVLLAGFPCQPFSQAG 83 + +T+ +V++ G PCQ FS AG Sbjct: 193 TQEETKARIMEACGNTPVNVVVGGPPCQGFSYAG 226 >gi|157952312|ref|YP_001497204.1| hypothetical protein NY2A_B008R [Paramecium bursaria Chlorella virus NY2A] gi|155122539|gb|ABT14407.1| hypothetical protein NY2A_B008R [Paramecium bursaria Chlorella virus NY2A] Length = 331 Score = 86.4 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ LF G GG ++ V+ SE++ ++KT+ +N P+ + GD++ I Sbjct: 4 LRAISLFAGAGGDTFGMKLA----GVDVVAFSELDADAMKTHNSNNPDCVALGDVSLIDE 59 Query: 62 QDIPDH---DVLLAGFPCQPFSQAG 83 + D++ AGFPCQ FS AG Sbjct: 60 AMLSQFVNIDIIFAGFPCQGFSNAG 84 >gi|288919495|ref|ZP_06413826.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f] gi|288349098|gb|EFC83344.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f] Length = 642 Score = 86.4 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 11/87 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-KTQ 62 + DLF G GG+ L LEQ + + +P + +T++ +F + D++ + Sbjct: 33 VADLFSGAGGLSLGLEQA----GLRVVLGVDHDPEATETHRHHFAGLTLDQDLSDPGRVD 88 Query: 63 DIP------DHDVLLAGFPCQPFSQAG 83 +I DV++ G PCQPFS+AG Sbjct: 89 EIAGLIRSLRLDVVVGGPPCQPFSRAG 115 >gi|284046510|ref|YP_003396850.1| DNA-cytosine methyltransferase [Conexibacter woesei DSM 14684] gi|283950731|gb|ADB53475.1| DNA-cytosine methyltransferase [Conexibacter woesei DSM 14684] Length = 424 Score = 86.4 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAK-- 58 L DLFCG GG+ L + +++ +P + TY+ NFP L+ GD+ Sbjct: 7 LTAVDLFCGAGGLSQGLADA----GMHVVAAADHDPDACATYRRNFPRTVLVEGDLTSRE 62 Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQ 81 + D D+L G PCQ +SQ Sbjct: 63 KHEALLDALQGSDLDLLAGGPPCQAYSQ 90 >gi|228950066|ref|ZP_04112251.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228809593|gb|EEM56029.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 445 Score = 86.4 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 10/84 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 + +F G GG+ ++ + + E++P + TY+ N P T ++ DI +K Sbjct: 15 VIGIFAGCGGLDTGFSKS----DFNVQLAIELDPDACNTYKKNHPETEVWNRDIKTVKGD 70 Query: 63 DIPDHD-----VLLAGFPCQPFSQ 81 +I +LL G PCQ FS Sbjct: 71 EIRKLVGNKPLILLGGSPCQSFSI 94 >gi|227112465|ref|ZP_03826121.1| putative C-5 cytosine-specific DNA methylase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 390 Score = 86.4 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 22/96 (22%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----------TLI 52 K DLF G GG L + V+ + E + + +TY+ NF Sbjct: 4 KAIDLFAGAGGFTL----SAIEAGVDVIAAVEFDKSAAETYRKNFIEGKKRKIELRSGPQ 59 Query: 53 FGDIAKIKTQDIP--------DHDVLLAGFPCQPFS 80 GDI I ++ + D++L G PCQ FS Sbjct: 60 KGDINNITPLELRQSLELERGELDIILGGPPCQGFS 95 >gi|224036442|pdb|3G7U|A Chain A, Crystal Structure Of Putative Dna Modification Methyltransferase Encoded Within Prophage Cp-933r (E.Coli) Length = 376 Score = 86.0 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 L + DLF G+GG+ L + + + EI+ +++ T+ NFP +L D++ + Sbjct: 3 LNVIDLFSGVGGLSLGAARA----GFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLN 58 Query: 61 TQDIPDH-------DVLLAGFPCQPFSQAG 83 + I D ++ G PCQ FS G Sbjct: 59 AEIIKGFFKNDMPIDGIIGGPPCQGFSSIG 88 >gi|94968156|ref|YP_590204.1| DNA-cytosine methyltransferase [Candidatus Koribacter versatilis Ellin345] gi|94550206|gb|ABF40130.1| DNA-cytosine methyltransferase [Candidatus Koribacter versatilis Ellin345] Length = 359 Score = 86.0 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 5/80 (6%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 +L G GG L LEQ + EIN ++ +T + N PN ++ GD+ Sbjct: 46 LELCAGAGGQALGLEQAGINH----VALVEINKHACETLRLNRPNWKVVEGDLQTFDPSP 101 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D++ AG PC PFS AG Sbjct: 102 YKGADIVSAGLPCPPFSVAG 121 >gi|323138162|ref|ZP_08073235.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242] gi|322396624|gb|EFX99152.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242] Length = 381 Score = 86.0 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 7/82 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKTQ 62 + F G G R L C F+++ + ++Y+AN+ + GD+ +I T Sbjct: 7 FYEFFAGGGMARAGL-----GPGWACLFANDFDRKKAESYRANWGGGEMHVGDVREITTA 61 Query: 63 DIP-DHDVLLAGFPCQPFSQAG 83 +P D++ A FPCQ S AG Sbjct: 62 QLPGRADLVWASFPCQDLSLAG 83 >gi|299065029|emb|CBJ36133.1| DNA-cytosine methyltransferase [Ralstonia solanacearum CMR15] Length = 385 Score = 86.0 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 7/85 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKI 59 M + F G G R L +C F+++ + TY+ N+ + L+ GD+ ++ Sbjct: 1 MGSFYEFFAGGGMARAGL-----GEGWQCLFANDFDHKKGVTYRQNWGEDELLTGDVRQV 55 Query: 60 KTQDIPD-HDVLLAGFPCQPFSQAG 83 K ++PD +++ FPCQ S AG Sbjct: 56 KPNNLPDRANLIWGSFPCQDLSLAG 80 >gi|225377327|ref|ZP_03754548.1| hypothetical protein ROSEINA2194_02974 [Roseburia inulinivorans DSM 16841] gi|225210858|gb|EEG93212.1| hypothetical protein ROSEINA2194_02974 [Roseburia inulinivorans DSM 16841] Length = 361 Score = 86.0 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIG L + + ++SEI + + +FP+ GDI K+ Sbjct: 4 IKLGSLFDGIGVFPLAASRC----GIRPVWASEIEKAPISITKRHFPDMAHLGDITKVDG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP V+ G PCQ S G Sbjct: 60 GKIPPVHVITFGSPCQNLSLIG 81 >gi|291566149|dbj|BAI88421.1| type II DNA modification methyltransferase [Arthrospira platensis NIES-39] Length = 379 Score = 86.0 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKTQD 63 +LF G GG+ LE +E EI+ + T N+ P + + DI + + Sbjct: 4 LELFAGAGGLAKGLEMA----GIEHKALVEIDHNACLTLAGNYKPELIYYVDIRSLNFAE 59 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D++ G PCQPFS G Sbjct: 60 FGHIDLISGGPPCQPFSMGG 79 >gi|270307689|ref|YP_003329747.1| DNA-cytosine methyltransferase [Dehalococcoides sp. VS] gi|270153581|gb|ACZ61419.1| DNA-cytosine methyltransferase [Dehalococcoides sp. VS] Length = 365 Score = 86.0 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 13/85 (15%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQD 63 DLFCG GG+ + L++ + + +P ++ TY++N + ++ DI K+K Sbjct: 20 IDLFCGCGGLTVGLKRA----GFRVIGAVDNDPIAITTYRSNHRDVKVWKKDITKLKIDT 75 Query: 64 IP--------DHDVLLAGFPCQPFS 80 + + D++ PCQ F+ Sbjct: 76 VKKRLKLRKGELDLVAGCPPCQGFT 100 >gi|298206640|ref|YP_003714819.1| site-specific DNA-methyltransferase [Croceibacter atlanticus HTCC2559] gi|83849270|gb|EAP87138.1| site-specific DNA-methyltransferase [Croceibacter atlanticus HTCC2559] Length = 735 Score = 86.0 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 14/96 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV-ECFFSSEINPYSVKTY--QANF----PNTLIFG 54 DLF G GG Q ++ + +++IN T+ + N + Sbjct: 119 FTFVDLFAGAGGFSEGFLQAEHNNKFFDFVVANDINENCELTHVVRYNHQLGLDAEFLKQ 178 Query: 55 DIAK-------IKTQDIPDHDVLLAGFPCQPFSQAG 83 DI + ++ + DV+ G PCQ FS AG Sbjct: 179 DITEPDFLDNLLEKINGRKIDVVCGGPPCQSFSLAG 214 >gi|268680630|ref|YP_003305061.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM 6946] gi|268618661|gb|ACZ13026.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM 6946] Length = 398 Score = 86.0 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 31/113 (27%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-----------------------VECFFSSEINPY 38 LK+ F G GG+ L LE F + + F+ +I P Sbjct: 4 LKVVSFFSGCGGLDLGLEGDFWVKAKSVKDKTWIKERHKNFVKLAPTAFQTVFACDIKPS 63 Query: 39 SVKTYQANF--PNTLIFGDIAKIKTQ------DIPDHDVLLAGFPCQPFSQAG 83 + K ++ F N I ++ + P+ DV+ GFPCQ FS AG Sbjct: 64 AKKAWEYYFQRDNVFHLESIVELVKKAKEGTFTFPNADVVTGGFPCQDFSVAG 116 >gi|54020626|ref|YP_116141.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae 232] gi|53987799|gb|AAV28000.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232] Length = 416 Score = 86.0 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 17/95 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------NTLIFGD 55 DLF G GG+ L S EI + +TY NF GD Sbjct: 92 YNFIDLFSGAGGLSCGLVMA----GFLPLASLEIMKQAFETYAYNFKKRSKNKELFKLGD 147 Query: 56 IAKIKTQ-DIPDH------DVLLAGFPCQPFSQAG 83 I K + + DH D++ GFPCQ FS AG Sbjct: 148 IRDSKIKSEFYDHFKDQELDLIAGGFPCQGFSMAG 182 >gi|47207937|emb|CAF91437.1| unnamed protein product [Tetraodon nigroviridis] Length = 405 Score = 86.0 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 +++ +L+ GIGG+ L+++ + + +IN + Y+ NFP+T + I I Sbjct: 1 MRVLELYSGIGGMHYALKES--EVCHQVVAAVDINTTANDVYRHNFPSTALLNKTIEGIT 58 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 ++ DV+L PCQPF++ G Sbjct: 59 LEEFNQLSFDVILMSPPCQPFTRIG 83 >gi|237753192|ref|ZP_04583672.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis ATCC BAA-430] gi|229375459|gb|EEO25550.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis ATCC BAA-430] Length = 354 Score = 86.0 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 11/90 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++ DLFCG GG ++Q + E + + ++ T+ NFP +I GDI IK Sbjct: 6 FRVLDLFCGAGGFSSGIDQ---NPYFETLLALDFEQSAINTFSHNFPKAQVICGDITDIK 62 Query: 61 TQDI-------PDHDVLLAGFPCQPFSQAG 83 ++ ++++ G PCQ FS G Sbjct: 63 IKNTLIKQAKRLKVNMIIGGPPCQGFSLKG 92 >gi|67924199|ref|ZP_00517640.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67853953|gb|EAM49271.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 358 Score = 86.0 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +K +LF G GG+ L LE + E++ V T Q N N T+ D++ I Sbjct: 72 IKTIELFAGCGGMALGLENAGVRHEL----LVEVSKDCVNTLQKNRQNWTIFQEDVSNID 127 Query: 61 TQD-IPDHDVLLAGFPCQPFSQAG 83 Q D++ GFPCQ FS AG Sbjct: 128 FQQYYGKIDIVSGGFPCQAFSYAG 151 >gi|328769954|gb|EGF79997.1| hypothetical protein BATDEDRAFT_35320 [Batrachochytrium dendrobatidis JAM81] Length = 621 Score = 86.0 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + + F GIGG+ LE + + + +INP + Y NF + I + + Sbjct: 6 RALEFFSGIGGMHFGLEWA--AIDAKVVAAFDINPQANACYNHNFGLEPVEKSIQDLNPK 63 Query: 63 DIPDHD--VLLAGFPCQPFSQAG 83 ++ +D L PCQP+++ G Sbjct: 64 ELERYDANCWLMSPPCQPYTRTG 86 >gi|113474395|ref|YP_720456.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] gi|110165443|gb|ABG49983.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] Length = 421 Score = 86.0 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 DLF G GG+ L EQ + S E++P ++ NFP +++ ++ ++ + Sbjct: 7 IDLFAGAGGMTLGFEQA----GFDIPISVELDPIHCAIHKFNFPFWSILCRNVVELTGNE 62 Query: 64 I--------PDHDVLLAGFPCQPFSQAG 83 I + DV+ G PCQ FSQ G Sbjct: 63 IREKLNIPNREIDVIFGGPPCQGFSQIG 90 >gi|326772743|ref|ZP_08232027.1| modification methylase XorII [Actinomyces viscosus C505] gi|326637375|gb|EGE38277.1| modification methylase XorII [Actinomyces viscosus C505] Length = 364 Score = 86.0 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +++ DLF G GG+ + + E++P + +Y+A FP T ++ G I Sbjct: 6 IRVLDLFAGAGGLTAGFHTASSR--FRSIAAVEMDPEAAASYRATFPKTEVYAGAIQDWL 63 Query: 61 TQ-DIP-DHDVLLAGFPCQPFSQAG 83 + IP DV++ G PCQ FS G Sbjct: 64 AEGTIPTGVDVVVGGPPCQGFSTLG 88 >gi|315654951|ref|ZP_07907856.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC 51333] gi|315490912|gb|EFU80532.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC 51333] Length = 508 Score = 86.0 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF G GG L +E ++SEI P+ + P GDI I Sbjct: 5 LRLGSLFDGSGGFPL----AATKVGIEPVWASEIEPFPILVTTTRLPQMQHLGDICDIDG 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + DV+ G PCQ S AG Sbjct: 61 SQLEPVDVVTFGSPCQDLSVAG 82 >gi|229492462|ref|ZP_04386265.1| DNA-cytosine methyltransferase [Rhodococcus erythropolis SK121] gi|229320448|gb|EEN86266.1| DNA-cytosine methyltransferase [Rhodococcus erythropolis SK121] Length = 387 Score = 86.0 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 7/78 (8%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP- 65 LF GIGG+ L L + EI+P + ++ F + + GD+ K++ +P Sbjct: 10 LFAGIGGLELGLSE----HGWNTELLCEIDPGAQAVLRSRFADVPLHGDVTKLRA--LPS 63 Query: 66 DHDVLLAGFPCQPFSQAG 83 D +++ AGFPCQ SQAG Sbjct: 64 DIELVAAGFPCQDLSQAG 81 >gi|226303815|ref|YP_002763773.1| modification methylase [Rhodococcus erythropolis PR4] gi|226182930|dbj|BAH31034.1| putative modification methylase [Rhodococcus erythropolis PR4] Length = 392 Score = 86.0 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 7/78 (8%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP- 65 LF GIGG+ L L + EI+P + ++ F + + GD+ K++ +P Sbjct: 15 LFAGIGGLELGLSE----HGWNTELLCEIDPGAQAVLRSRFADVPLHGDVTKLRA--LPS 68 Query: 66 DHDVLLAGFPCQPFSQAG 83 D +++ AGFPCQ SQAG Sbjct: 69 DIELVAAGFPCQDLSQAG 86 >gi|156937913|ref|YP_001435709.1| DNA-cytosine methyltransferase [Ignicoccus hospitalis KIN4/I] gi|156566897|gb|ABU82302.1| DNA-cytosine methyltransferase [Ignicoccus hospitalis KIN4/I] Length = 315 Score = 86.0 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 9/84 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 DLF G GG L E E + + ++Y AN P L D++K+ ++ Sbjct: 5 FFDLFSGAGGFALGFEMA----GFEGVLGVDNDKAPARSYAANHPKALTLVEDVSKLSSK 60 Query: 63 DIP----DHDVLLAGFPCQPFSQA 82 I D DV++ PC+P++ A Sbjct: 61 TIERLVGDVDVVIGSPPCEPYTAA 84 >gi|323693680|ref|ZP_08107879.1| type II DNA modification methyltransferase [Clostridium symbiosum WAL-14673] gi|323502294|gb|EGB18157.1| type II DNA modification methyltransferase [Clostridium symbiosum WAL-14673] Length = 303 Score = 86.0 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGGI L E E + ++ + ++P F DI + Sbjct: 4 LTHFSLFSGIGGIDLAAEAA----GFTTVCQCEWADFPMEVLKKHWPQVPKFKDITTVTK 59 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + ++ GFPCQPFS AG Sbjct: 60 EAFFEKTGRETTTLISGGFPCQPFSSAG 87 >gi|167462714|ref|ZP_02327803.1| possible DNA (cytosine-5-)-methyltransferase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382689|ref|ZP_08056545.1| DNA-methyltransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153341|gb|EFX45773.1| DNA-methyltransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 260 Score = 86.0 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K LF GIGGI L +E E + K + ++PNT I+ D+ + Sbjct: 1 MKKLSLFSGIGGIDL----AAKWAGIETVAFCEKEHFPQKVLRRHWPNTPIYDDVCTLTR 56 Query: 62 QDIPD---------HDVLLAGFPCQPFSQAG 83 + + D++ AG+PCQ S AG Sbjct: 57 EVLERDGIIGTGRTIDLISAGYPCQGESYAG 87 >gi|42783651|ref|NP_980898.1| DNA-cytosine methyltransferase family protein [Bacillus cereus ATCC 10987] gi|42739580|gb|AAS43506.1| DNA-cytosine methyltransferase family protein [Bacillus cereus ATCC 10987] Length = 362 Score = 86.0 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + F G GG+ + + + + S E+ P +T + N PN ++ GDI Sbjct: 1 MNCISFFAGAGGLDMGIHKA----GFDVRVSVELEPVYCETLRTNHPNWNVVEGDIMTYT 56 Query: 61 TQDI--------PDHDVLLAGFPCQPFSQAG 83 + + + D+++ G PCQ FS AG Sbjct: 57 PEQVLEQADLQEGEVDLMIGGSPCQSFSTAG 87 >gi|262192113|ref|ZP_06050275.1| DNA-cytosine methyltransferase [Vibrio cholerae CT 5369-93] gi|262032024|gb|EEY50600.1| DNA-cytosine methyltransferase [Vibrio cholerae CT 5369-93] Length = 393 Score = 85.6 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 22/97 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLI------ 52 +K DLF G GG L + H V + E + + TY+ NF I Sbjct: 3 IKAIDLFAGAGGFTL----SAIHAGVSVLAAIEFDEAAANTYKENFIKAGKHNIDLRAGK 58 Query: 53 -FGDIAKIKTQDIPD--------HDVLLAGFPCQPFS 80 FGDI + ++ D D++L G PCQ FS Sbjct: 59 DFGDINNVDPLELRDSLGLKKGELDLILGGPPCQGFS 95 >gi|239624264|ref|ZP_04667295.1| DNA-cytosine methyltransferase [Clostridiales bacterium 1_7_47_FAA] gi|239520650|gb|EEQ60516.1| DNA-cytosine methyltransferase [Clostridiales bacterium 1_7_47FAA] Length = 470 Score = 85.6 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGG + ++SE+ P ++ + + P + GDI K+ + +P Sbjct: 45 LFDGIGGFPY----AALFYGIRPVWASEVLPTAISVTKRHIPEMVHVGDITKLDGRKLPP 100 Query: 67 HDVLLAGFPCQPFSQAG 83 D++ G PCQ S +G Sbjct: 101 VDIITFGSPCQGLSISG 117 >gi|319782483|ref|YP_004141959.1| DNA-cytosine methyltransferase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168371|gb|ADV11909.1| DNA-cytosine methyltransferase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 368 Score = 85.6 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 34/92 (36%), Gaps = 17/92 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDI 56 + DLF G GG L + + E N + TY+ NF L DI Sbjct: 1 MNCIDLFAGAGGFSLAARNA----GLTIKLAVEHNKSAASTYRKNFAALEPKLVLRDEDI 56 Query: 57 AKIKTQDI--------PDHDVLLAGFPCQPFS 80 + + P D+LL G PCQ FS Sbjct: 57 RTLSPVKLAREIFGRNPSCDLLLGGPPCQGFS 88 >gi|188581100|ref|YP_001924545.1| DNA-cytosine methyltransferase [Methylobacterium populi BJ001] gi|179344598|gb|ACB80010.1| DNA-cytosine methyltransferase [Methylobacterium populi BJ001] Length = 446 Score = 85.6 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 14/89 (15%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQD 63 DLF G GG+ L EQ + ++EI+P ++ NFPN + + + + Sbjct: 7 IDLFSGAGGLSLGFEQA----GFDVRAAAEIDPVHAAVHKFNFPNCAVLARSVVGLTAAE 62 Query: 64 IPD---------HDVLLAGFPCQPFSQAG 83 I + DV+ G PCQ FS G Sbjct: 63 IREAAALGPSDRVDVVFGGPPCQGFSMIG 91 >gi|86360841|ref|YP_472728.1| DNA (cytosine-5-)-methyltransferase protein [Rhizobium etli CFN 42] gi|86284943|gb|ABC94001.1| probable DNA (cytosine-5-)-methyltransferase protein [Rhizobium etli CFN 42] Length = 504 Score = 85.6 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 18/95 (18%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI-AKIKT 61 ++ DLF G GGI L + E + E +P + +++ NF + I I Sbjct: 22 RVLDLFSGCGGISLGFQSA----GFEIVAAVENDPDAARSHGLNFHHGEDRHSIPRNITV 77 Query: 62 QD-------------IPDHDVLLAGFPCQPFSQAG 83 DV++ G PCQ F++ G Sbjct: 78 TSPAALATALGLGAAASAFDVIVGGPPCQAFARVG 112 >gi|86747598|ref|YP_484094.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2] gi|86570626|gb|ABD05183.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2] Length = 390 Score = 85.6 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF GIGG+ L L + + E SEI + + F GD+A + + Sbjct: 1 MKIAGLFAGIGGLELGLHRAGH----ETVILSEIWQPAGAVLEHRFKGAPNVGDVATLTS 56 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 +P + +++ AGFPCQ SQAG Sbjct: 57 --LPSEVELMTAGFPCQDLSQAG 77 >gi|225386628|ref|ZP_03756392.1| hypothetical protein CLOSTASPAR_00376 [Clostridium asparagiforme DSM 15981] gi|225047326|gb|EEG57572.1| hypothetical protein CLOSTASPAR_00376 [Clostridium asparagiforme DSM 15981] Length = 340 Score = 85.6 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 33/88 (37%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGG+ L E E E + A +P+ F DI Sbjct: 4 LTHVSLFSGIGGLDLAAEAA----GFETVCQCEWADFPHSVLSARWPDVPRFRDITTFTK 59 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + V+ GFPCQPFS AG Sbjct: 60 EAFFEKTGLETVTVISGGFPCQPFSTAG 87 >gi|46019826|emb|CAE52348.1| putative cytosine-specific methyltransferase [Streptococcus thermophilus] Length = 365 Score = 85.6 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 19/94 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----------FPNT 50 + DLF G GG+ +Q + + ++KTY+ N F Sbjct: 4 YNVVDLFSGAGGLSQGFKQA----GFNILMGVDFDDPALKTYKHNLKDSVALKADLFDEE 59 Query: 51 LIFGDI-AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI + I DV++AG PCQ FS G Sbjct: 60 SAIKDIENNLNGNKI---DVIIAGPPCQGFSLTG 90 >gi|254460591|ref|ZP_05074007.1| C-5 cytosine-specific DNA methylase [Rhodobacterales bacterium HTCC2083] gi|206677180|gb|EDZ41667.1| C-5 cytosine-specific DNA methylase [Rhodobacteraceae bacterium HTCC2083] Length = 384 Score = 85.6 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 7/83 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 K + F G G + L +C +++I+P +TY+ N+ L+ GD+A++ Sbjct: 10 KFAEFFSGGGMVHAAL-----GAQWDCVLANDIDPMKCETYRQNWGGAHLLEGDVAELPE 64 Query: 62 QDI-PDHDVLLAGFPCQPFSQAG 83 + D++ A PCQ FS AG Sbjct: 65 GTLHQPLDLIWASSPCQDFSLAG 87 >gi|160943738|ref|ZP_02090969.1| hypothetical protein FAEPRAM212_01233 [Faecalibacterium prausnitzii M21/2] gi|158444912|gb|EDP21915.1| hypothetical protein FAEPRAM212_01233 [Faecalibacterium prausnitzii M21/2] Length = 298 Score = 85.6 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGGI L E E + +++P F DI + Sbjct: 3 LTHFSLFSGIGGIDLAAEAA----GFTSVCQCEWAAFPAAVLASHWPEVPHFQDITTVTK 58 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + ++ GFPCQPFS AG Sbjct: 59 EAFFEKTGLRTVTLISGGFPCQPFSTAG 86 >gi|270265139|ref|ZP_06193402.1| hypothetical protein SOD_k01780 [Serratia odorifera 4Rx13] gi|270041073|gb|EFA14174.1| hypothetical protein SOD_k01780 [Serratia odorifera 4Rx13] Length = 350 Score = 85.6 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 13/88 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLFCG GG+ L+ + E+ + TY+ N P+ +++ DI + Sbjct: 3 FSAIDLFCGAGGLTCGLKDA----GFKVLAGVEVEAVAADTYRTNHPDHVLYEADIRTLD 58 Query: 61 TQDI--------PDHDVLLAGFPCQPFS 80 Q I D D+L PCQ FS Sbjct: 59 PQKIMQELHLQPGDLDLLAGCPPCQGFS 86 >gi|27733906|ref|NP_775697.1| putative C5-methyltransferase [Leuconostoc citreum] gi|27552370|emb|CAD38156.1| putative C5-methyltransferase [Leuconostoc citreum] Length = 403 Score = 85.6 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 28/107 (26%) Query: 3 KITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINPY 38 + LF G GG+ L LE +S++ Sbjct: 50 NVVSLFSGAGGLDLGLEMAGIDAVMGSKFTDNILNDKTEYNKNRKKSIFNIVYSNDNFKE 109 Query: 39 SVKTYQANFPNTLIFGD--IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + +TY F ++ D I K+ P++D+++ GFPC FS AG Sbjct: 110 ANQTYTDMFSENIVKHDKDIRKVAI--FPNNDIMIGGFPCPGFSSAG 154 >gi|68249825|ref|YP_248937.1| modification methylase BepI-like [Haemophilus influenzae 86-028NP] gi|68058024|gb|AAX88277.1| modification methylase BepI-like [Haemophilus influenzae 86-028NP] gi|309973261|gb|ADO96462.1| DNA (cytosine-5-)-methyltransferase [Haemophilus influenzae R2846] Length = 407 Score = 85.6 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 40/122 (32%) Query: 2 LKITDLFCGIGGIRLDLEQTFN--------------------------HRNVECFFSSEI 35 +K+ LF G GG+ + E +F+ + E F+++I Sbjct: 1 MKLISLFSGCGGMDIGFEGSFSCLKKSINEELHPEWISSTENEWVTVSPTSFETIFANDI 60 Query: 36 NPYSVK---TY----QANFPNTLIFGDIAKIKTQD------IP-DHDVLLAGFPCQPFSQ 81 P + +Y +AN I + ++ P D D+L GFPCQ FS Sbjct: 61 KPDAKAAWVSYFLDQKANANEIYHLESIVDLVKKERETHNIFPKDIDILTGGFPCQDFSV 120 Query: 82 AG 83 AG Sbjct: 121 AG 122 >gi|254475144|ref|ZP_05088530.1| DNA-cytosine methyltransferase [Ruegeria sp. R11] gi|214029387|gb|EEB70222.1| DNA-cytosine methyltransferase [Ruegeria sp. R11] Length = 324 Score = 85.6 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 ML +L G GG L LE+ E EI+ + T + N P ++ D+ K Sbjct: 1 MLTSVELCAGAGGQALGLEKA----GFEHTALVEIDKHCCATLRHNRPKWNVLEEDVRKF 56 Query: 60 K--TQDIPDHDVLLAGFPCQPFSQAG 83 K D+L G PC PFS AG Sbjct: 57 KDVADSYHGIDLLAGGLPCPPFSVAG 82 >gi|157112484|ref|XP_001657555.1| DNA (cytosine-5)-methyltransferase [Aedes aegypti] gi|108878059|gb|EAT42284.1| DNA (cytosine-5)-methyltransferase [Aedes aegypti] Length = 344 Score = 85.2 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 5/83 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQ 62 + +LF GIGG+ +E++ + + +INP + Y NF N +I + Sbjct: 17 VLELFSGIGGMHFAIERSGKR--YKVVSAIDINPVANAIYNHNFGANKASNSNILSLTPD 74 Query: 63 DIPD--HDVLLAGFPCQPFSQAG 83 I +V+L PCQPFS+ G Sbjct: 75 RIQKLGVNVILMSPPCQPFSRNG 97 >gi|87310990|ref|ZP_01093115.1| DNA-cytosine methyltransferase [Blastopirellula marina DSM 3645] gi|87286280|gb|EAQ78189.1| DNA-cytosine methyltransferase [Blastopirellula marina DSM 3645] Length = 385 Score = 85.2 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 6/83 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKIK 60 + F GIG +RL LE+ E F+++I+ + Y+A+F GD+ ++ Sbjct: 8 TFAEFFAGIGLVRLGLERA----GWEVRFANDIDAAKHRQYEAHFGADEAFALGDVHQLD 63 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 IPD + A FPC S AG Sbjct: 64 AAAIPDVTLATASFPCTDLSLAG 86 >gi|317057160|ref|YP_004105627.1| XRE family transcriptional regulator [Ruminococcus albus 7] gi|315449429|gb|ADU22993.1| transcriptional regulator, XRE family [Ruminococcus albus 7] Length = 407 Score = 85.2 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +LF G GG+ L +E+ E++ + T + N P +I DIA I Sbjct: 74 FSTIELFAGAGGLALGVEKA----GFITLGLVEVDKDASDTLRRNRPEWRVINDDIANIS 129 Query: 61 TQDIPDH--------DVLLAGFPCQPFSQAG 83 D+ D+ D+L G PCQ FS AG Sbjct: 130 CLDLQDYFGLKKGELDLLSGGAPCQSFSYAG 160 >gi|50949214|emb|CAF31654.1| putative C5-methyltransferase [Cloning vector pGID052] Length = 307 Score = 85.2 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 28/107 (26%) Query: 3 KITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINPY 38 + LF G GG+ L LE +S++ Sbjct: 50 NVVSLFSGAGGLDLGLEMAGIDAVMGSKFTDNILNDKTEYNKNRKKSIFNIVYSNDNFKE 109 Query: 39 SVKTYQANFPNTLIFGD--IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + +TY F ++ D I K+ P++D+++ GFPC FS AG Sbjct: 110 ANQTYTDMFSENIVKHDKDIRKVAI--FPNNDIMIGGFPCPGFSSAG 154 >gi|325270514|ref|ZP_08137114.1| modification methylase HindV [Prevotella multiformis DSM 16608] gi|324987090|gb|EGC19073.1| modification methylase HindV [Prevotella multiformis DSM 16608] Length = 320 Score = 85.2 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 +K DLFCG GG+ L +Q + + + Y+ NF + + D+ Sbjct: 1 MKAVDLFCGCGGLSLGFQQA----GYNVVAAYDNWDAATDVYRLNFSHPVHKADLMDAGK 56 Query: 60 KTQDIPDH--DVLLAGFPCQPFSQAG 83 ++ I + ++++ G PCQ +S AG Sbjct: 57 ASESIARYAPEIIIGGPPCQDYSSAG 82 >gi|237742048|ref|ZP_04572529.1| site-specific DNA-methyltransferase [Fusobacterium sp. 4_1_13] gi|229429696|gb|EEO39908.1| site-specific DNA-methyltransferase [Fusobacterium sp. 4_1_13] Length = 440 Score = 85.2 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 28/103 (27%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--------PNTLIF-GD 55 DLFCG GG+ + Q FS+EI+ + +TY+ NT + D Sbjct: 13 IDLFCGAGGMSEGILQA----GFHIIFSNEISKDASETYRKRHEQLGLEQGKNTWLEVAD 68 Query: 56 IAKI-------KTQDIPDH--------DVLLAGFPCQPFSQAG 83 I I K ++ D D + G PCQ FS+AG Sbjct: 69 IKNITGTYIKKKISELKDFKENKNIEIDAIFGGPPCQGFSRAG 111 >gi|225164697|ref|ZP_03726934.1| DNA-cytosine methyltransferase [Opitutaceae bacterium TAV2] gi|224800687|gb|EEG19046.1| DNA-cytosine methyltransferase [Opitutaceae bacterium TAV2] Length = 372 Score = 85.2 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + ++ G GG L L Q + EI+ + KT + N P+ + D+ +I+ Sbjct: 5 FSVFEICAGAGGQALGLHQA----GFASAGAVEIDSDACKTLRLNRPDWNVFECDVREIR 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +D D+L G PC PFS AG Sbjct: 61 GRDFAGVDLLAGGVPCPPFSTAG 83 >gi|266624606|ref|ZP_06117541.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM 13479] gi|288863534|gb|EFC95832.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM 13479] Length = 434 Score = 85.2 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 LF GIGG + ++SE+ P ++ + + P + GDI K+ + +P Sbjct: 9 LFDGIGGFPY----AALFYGIRPVWASEVLPTAISVTKRHIPEMVHVGDITKLDGRKLPP 64 Query: 67 HDVLLAGFPCQPFSQAG 83 D++ G PCQ S +G Sbjct: 65 VDIITFGSPCQGLSISG 81 >gi|295691449|ref|YP_003595142.1| DNA-cytosine methyltransferase [Caulobacter segnis ATCC 21756] gi|295433352|gb|ADG12524.1| DNA-cytosine methyltransferase [Caulobacter segnis ATCC 21756] Length = 374 Score = 85.2 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 8/81 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAKI 59 + F G G R+ L C F+++ +P TY+ANF GD+ + Sbjct: 8 TFLEFFAGGGMARIGL-----GNGWTCAFANDFDPVKAATYRANFGADEGHFQQGDVFAL 62 Query: 60 KTQDIPDHDVLLAGFPCQPFS 80 + +P D+ A PCQ FS Sbjct: 63 SAETLPTADLAWASSPCQDFS 83 >gi|228917967|ref|NP_142059.2| modification methylase [Pyrococcus horikoshii OT3] Length = 312 Score = 85.2 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 6/79 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + DLF G GG L + E +TY NFP ++ DI + + Sbjct: 12 VIDLFAGAGGFSLGF----KLSGFRIVSAIESFRPKAETYSINFPEAKVVVRDIKAVNPR 67 Query: 63 DI-PDHDVLLAGFPCQPFS 80 +I DV++ G PC+PF+ Sbjct: 68 EIAEKVDVIIGGPPCEPFT 86 >gi|225026529|ref|ZP_03715721.1| hypothetical protein EUBHAL_00778 [Eubacterium hallii DSM 3353] gi|224956143|gb|EEG37352.1| hypothetical protein EUBHAL_00778 [Eubacterium hallii DSM 3353] Length = 461 Score = 85.2 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 19/99 (19%) Query: 3 KITDLFCGIGGIRLDL------EQTFNHRNVECFFSSEINP------YSVKTYQANFPNT 50 + +LF G+GG R L E + + ++ P Y+ Y F Sbjct: 4 TVCELFAGVGGFRCGLNNIKTAEDYGKEEKWDTVWFNQWEPSEKTTQYAHDCYVYRFGPR 63 Query: 51 LIFG-------DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 L +I + IPD ++L+ GFPCQ +S A Sbjct: 64 LDINGEDTTNYNIEDVDKAKIPDFNLLVGGFPCQDYSVA 102 >gi|229061562|ref|ZP_04198906.1| C5 methyltransferase alpha subunit [Bacillus cereus AH603] gi|228717796|gb|EEL69446.1| C5 methyltransferase alpha subunit [Bacillus cereus AH603] Length = 353 Score = 85.2 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 10/74 (13%) Query: 16 LDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKIKTQDIP----DHDV 69 + +EQ + +C E + ++ K+Y+ N DI + D+ DV Sbjct: 1 MGMEQAGH----KCLGYVEKDKFARKSYEAIHNTKGEWTAHDITTVTNDDLRLLRGTVDV 56 Query: 70 LLAGFPCQPFSQAG 83 + GFPCQ FS AG Sbjct: 57 ICGGFPCQAFSIAG 70 >gi|254876424|ref|ZP_05249134.1| predicted protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842445|gb|EET20859.1| predicted protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 458 Score = 85.2 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 37/115 (32%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--- 57 M+K DLF G GG+ L + F+ E +P + +T+ NF I +I Sbjct: 1 MMKYIDLFAGCGGLSLGF----KSEGFDLLFAVEKSPMAAETFYHNFIEK-INDNIEWSK 55 Query: 58 --------KIKTQ---------------------DIPDHDVLLAGFPCQPFSQAG 83 ++ ++ I + D+++ G PCQ FS AG Sbjct: 56 YLNKSIEEQLDSKLFVGETLTLLEKPQLLKKLKTKIGELDLIVGGPPCQGFSLAG 110 >gi|268607976|ref|ZP_06141707.1| cytosine-specific DNA-methyltransferase Sau96I [Ruminococcus flavefaciens FD-1] Length = 407 Score = 85.2 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +LF G GG+ L +E+ E++ + T + N P +I DIA + Sbjct: 74 FSTIELFAGAGGLALGVEKA----GFNTLGLVEVDKDASDTLRRNRPEWRVINDDIANVS 129 Query: 61 TQDIPDH--------DVLLAGFPCQPFSQAG 83 D+ ++ D+L G PCQ FS AG Sbjct: 130 CLDLQEYFGLKQGELDLLSGGAPCQSFSYAG 160 >gi|281491831|ref|YP_003353811.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp. lactis KF147] gi|281375542|gb|ADA65048.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp. lactis KF147] Length = 347 Score = 85.2 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L + DLF G GG+ E + + + +++T++ N N + GDI + Sbjct: 5 LSVIDLFSGAGGLSYGFELA----GYDILLGIDNDFDALRTFEKNHKNSKTLEGDITQFT 60 Query: 61 -TQDIP------DHDVLLAGFPCQPFSQAG 83 +DI D+++ G PCQ S +G Sbjct: 61 YEKDIKPLINDQKIDIIVGGPPCQGMSLSG 90 >gi|145218883|ref|YP_001129592.1| DNA-cytosine methyltransferase [Prosthecochloris vibrioformis DSM 265] gi|145205047|gb|ABP36090.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265] Length = 377 Score = 84.8 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L +LFCG GG+ + L + ++EI P T+ N P T + DI I Sbjct: 5 LNAVELFCGAGGLSIGLSRA----GFHIALANEIEPDFAATFSLNHPETKMLNEDIHDID 60 Query: 61 TQ------DIPDHDVLLAGFPCQPFSQAG 83 I D ++ G PCQ FS G Sbjct: 61 FARESLKTGITDVTLVSGGPPCQGFSTVG 89 >gi|315230475|ref|YP_004070911.1| DNA-cytosine methyltransferase [Thermococcus barophilus MP] gi|315183503|gb|ADT83688.1| DNA-cytosine methyltransferase [Thermococcus barophilus MP] Length = 321 Score = 84.8 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 M I DLF G GG ++ + + E TY+ NFP ++ DI +I Sbjct: 1 MYTIIDLFAGAGGFSRGFKEA----GFKILAAIENFAPKADTYKFNFPEVRMYVEDIKRI 56 Query: 60 KTQDI-PDH---DVLLAGFPCQPFSQA 82 T D+ D DV++ G PC+P++ A Sbjct: 57 HTIDVMRDVGVPDVIIGGPPCEPYTAA 83 >gi|284161497|ref|YP_003400120.1| DNA-cytosine methyltransferase [Archaeoglobus profundus DSM 5631] gi|284011494|gb|ADB57447.1| DNA-cytosine methyltransferase [Archaeoglobus profundus DSM 5631] Length = 310 Score = 84.8 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 9/84 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + + D+F G GG E + E +TY+ NFP +I D+ +++ Sbjct: 1 MNVVDVFAGCGGFSRGF----KEEGFELVAAIENFKPVAETYKTNFPEVEVIVKDVKEVR 56 Query: 61 TQDIP----DHDVLLAGFPCQPFS 80 D+ D DVL+ PC+PF+ Sbjct: 57 GFDVERICGDVDVLIGSPPCEPFT 80 >gi|110834520|ref|YP_693379.1| C-5 cytosine-specific DNA methylase family protein [Alcanivorax borkumensis SK2] gi|110647631|emb|CAL17107.1| C-5 cytosine-specific DNA methylase family protein [Alcanivorax borkumensis SK2] Length = 308 Score = 84.8 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 7/79 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDI 64 LF G GG L Q + +++I PY+ Y ANFP T D+ +I Q Sbjct: 2 SLFTGCGGSDSGLHQA----GYDVLMANDILPYAKDFYLANFPETDYQVIDVREI--QSF 55 Query: 65 PDHDVLLAGFPCQPFSQAG 83 P DVL+ +PCQ FSQ G Sbjct: 56 PSADVLVGCYPCQGFSQGG 74 >gi|312889577|ref|ZP_07749127.1| C-5 cytosine-specific DNA methylase [Mucilaginibacter paludis DSM 18603] gi|311297925|gb|EFQ75044.1| C-5 cytosine-specific DNA methylase [Mucilaginibacter paludis DSM 18603] Length = 79 Score = 84.8 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML LF GIGG + + FS E +P+ K + +P T + DI + Sbjct: 1 MLTHASLFSGIGGFDM----AATWKGWYNIFSCEKDPFCRKILKFYWPQTEQYEDIHQFD 56 Query: 61 TQDIP-DHDVLLAGFPCQPFSQA 82 ++L GFPCQPFS A Sbjct: 57 ATPYRGSINILSGGFPCQPFSSA 79 >gi|303274236|ref|XP_003056440.1| cytosine-specific DNA methylase [Micromonas pusilla CCMP1545] gi|226462524|gb|EEH59816.1| cytosine-specific DNA methylase [Micromonas pusilla CCMP1545] Length = 1085 Score = 84.8 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 7/80 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K LF GIGG+ L LE+ + E E +P+ V+ Q FP + D+A+++ Sbjct: 1 MKTVSLFSGIGGLDLGLEEAGH----EVILQVENDPHCVQVLQRQFPGKALARDVAEVR- 55 Query: 62 QDIP-DHDVLLAGFPCQPFS 80 D+P + ++L AGFPC S Sbjct: 56 -DLPEETELLAAGFPCPDVS 74 >gi|52788777|gb|AAU87368.1| MnlI m5C-methyltransferase [Moraxella nonliquefaciens] Length = 351 Score = 84.8 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAK-- 58 + I DLFCG GG+ EQ + N ++ TYQ N N+ ++ GD+ Sbjct: 1 MNILDLFCGAGGLSYGFEQA----GFNAVLGVDFNEKALDTYQKNHKNSQILCGDLTSCE 56 Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83 +K + +L G PCQ FS G Sbjct: 57 LKDEIVKIAKTNNVRAVLGGPPCQGFSLKG 86 >gi|332655271|ref|ZP_08421011.1| putative type II DNA modification methyltransferase [Ruminococcaceae bacterium D16] gi|332515776|gb|EGJ45386.1| putative type II DNA modification methyltransferase [Ruminococcaceae bacterium D16] Length = 298 Score = 84.8 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGGI L E E + +++P F DI + Sbjct: 3 LTHFSLFSGIGGIDLAAEAA----GFTSVCQCEWAAFPAAVLASHWPEVPRFQDITTVTK 58 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + ++ GFPCQPFS AG Sbjct: 59 EAFFEKTGLRTVTLISGGFPCQPFSTAG 86 >gi|3746579|gb|AAC64006.1| cytosine methyltransferase [Paramecium bursaria Chlorella virus NYs1] Length = 362 Score = 84.8 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK +LF GI GI L + F VE EIN + + FP+ +F D+ K Sbjct: 3 LKALELFAGIAGITHGL-RGF----VEPVAFVEINKDAQEFLSTKFPDKPVFDDVTKFSK 57 Query: 62 QDI-PDHDVLLAGFPCQPFSQAG 83 +D D++ GFPC FS AG Sbjct: 58 RDFDEPIDMITGGFPCTGFSIAG 80 >gi|325286536|ref|YP_004262326.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489] gi|324321990|gb|ADY29455.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489] Length = 414 Score = 84.8 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 15/93 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--I 59 L DLFCG GG+ E + + TY+ NF + I GDI + + Sbjct: 96 LTSADLFCGAGGMAKGFEMA----GFTQVGGLDWFKEAGMTYRENFEHPHILGDITERSV 151 Query: 60 KTQDIPDH---------DVLLAGFPCQPFSQAG 83 K + I VL GFPCQ FS +G Sbjct: 152 KDKFINTVKSSLNGKPLTVLSGGFPCQGFSMSG 184 >gi|23428398|gb|AAL15430.1| DNA methyltransferase A [Moraxella nonliquefaciens] Length = 351 Score = 84.8 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAK-- 58 + I DLFCG GG+ EQ + N ++ TYQ N N+ ++ GD+ Sbjct: 1 MNILDLFCGAGGLSYGFEQA----GFNAVLGVDFNEKALDTYQKNHKNSQILCGDLTSCE 56 Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83 +K + +L G PCQ FS G Sbjct: 57 LKDEIVKIAKTNNVRAVLGGPPCQGFSLKG 86 >gi|118431236|ref|NP_147563.2| DNA (cytosine-5-)-methyltransferase [Aeropyrum pernix K1] gi|116062559|dbj|BAA79854.2| DNA (cytosine-5-)-methyltransferase [Aeropyrum pernix K1] Length = 469 Score = 84.8 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 21/95 (22%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----------------P 48 LF G GG+ L Q+ F++EI + TY N P Sbjct: 7 ISLFSGAGGLDLGFVQSGR---FRIVFANEILLPAAVTYSRNLGLRLEVCGDEPRVEAQP 63 Query: 49 NTLIFGDIAKIKTQDIP--DHDVLLAGFPCQPFSQ 81 T++ D+AK+ + D DV++ G PCQ FS Sbjct: 64 GTIMACDVAKLDFTGLSGVDADVIIGGPPCQDFSI 98 >gi|294667855|ref|ZP_06733064.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602358|gb|EFF45800.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 410 Score = 84.8 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 13/89 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L DLF G GG+ L + +++EI+P +TY N P T + DI K+ Sbjct: 11 LTSLDLFAGAGGLSEGLREA----GFTSLYANEISPRYAQTYAVNHPGTQVDSQDIRKVD 66 Query: 61 TQDIP--------DHDVLLAGFPCQPFSQ 81 + + + D++ G PCQ FS Sbjct: 67 ARKVRKLLGLKRGELDLIAGGPPCQGFSI 95 >gi|83944557|ref|ZP_00957008.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. EE-36] gi|83844594|gb|EAP82480.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. EE-36] Length = 373 Score = 84.8 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 + + F G G +R L C F+++++P + Y+ N+ + L+ DIA + Sbjct: 1 MTFYEFFAGGGMVRAGL-----GVRWRCLFANDVSPKKARIYRRNWGGDALVLADIAALT 55 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 + ++PD D++ FPCQ S AG Sbjct: 56 SAELPDVPDLVWGSFPCQDLSVAG 79 >gi|108797795|ref|YP_637992.1| DNA-cytosine methyltransferase [Mycobacterium sp. MCS] gi|119866887|ref|YP_936839.1| DNA-cytosine methyltransferase [Mycobacterium sp. KMS] gi|108768214|gb|ABG06936.1| DNA-cytosine methyltransferase [Mycobacterium sp. MCS] gi|119692976|gb|ABL90049.1| DNA-cytosine methyltransferase [Mycobacterium sp. KMS] Length = 385 Score = 84.8 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 7/82 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + LF GIGG+ + L ++ E EI+P + + P+ + D+ +++ Sbjct: 4 TVAGLFAGIGGLEVGLSRS----GWETTLLCEIDPAARAVLSHHMPDVELQDDVRRLRA- 58 Query: 63 DIP-DHDVLLAGFPCQPFSQAG 83 +P D+L AGFPCQ SQAG Sbjct: 59 -LPQSLDLLAAGFPCQDLSQAG 79 >gi|186683211|ref|YP_001866407.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] gi|14594714|gb|AAK68647.1| cytosine-specific DNA methyltransferase [Nostoc punctiforme PCC 73102] gi|186465663|gb|ACC81464.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] Length = 421 Score = 84.8 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQD 63 DLF G GG+ L EQ + S EI+P T++ NFP ++ + ++ Sbjct: 13 VDLFAGAGGMTLGFEQA----GFDVLASVEIDPIHCATHEFNFPYCSVLCQSVVDTTGEE 68 Query: 64 I--------PDHDVLLAGFPCQPFSQAG 83 I + DV++ G PCQ FS G Sbjct: 69 IRSRSKIGDREIDVVICGSPCQGFSLIG 96 >gi|26990694|ref|NP_746119.1| DNA-cytosine methyltransferase [Pseudomonas putida KT2440] gi|24985686|gb|AAN69583.1|AE016592_2 DNA-cytosine methyltransferase [Pseudomonas putida KT2440] Length = 348 Score = 84.8 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 16/92 (17%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKT 61 K+ LFCG GG+ L + F+++ + Y+V+TY N P D+ + Sbjct: 24 KLVSLFCGAGGLDLGFIDA----GFDVVFAADHDRYAVETYNHNHPGQRASKVDLLETSP 79 Query: 62 QDIPDHDVL-----------LAGFPCQPFSQA 82 +++ VL + G PCQ FS+A Sbjct: 80 EELYKRSVLEPGFEGAIHGIIGGPPCQGFSRA 111 >gi|262171500|ref|ZP_06039178.1| modification methylase PspPI (Cytosine-specific methyltransferase PspPI) (M.PspPI) [Vibrio mimicus MB-451] gi|261892576|gb|EEY38562.1| modification methylase PspPI (Cytosine-specific methyltransferase PspPI) (M.PspPI) [Vibrio mimicus MB-451] Length = 416 Score = 84.8 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Query: 22 FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPD-HDVLLAGFPCQPF 79 ++ F +E++ Y+ +T + N P ++ GDI+KI I + D+L GFPCQ F Sbjct: 94 MEQAGLQSIFLNELDKYACETLRHNRPEWNVVEGDISKIDFTTITEPVDILTGGFPCQAF 153 Query: 80 SQAG 83 S AG Sbjct: 154 SYAG 157 >gi|171184904|ref|YP_001793823.1| DNA-cytosine methyltransferase [Thermoproteus neutrophilus V24Sta] gi|170934116|gb|ACB39377.1| DNA-cytosine methyltransferase [Thermoproteus neutrophilus V24Sta] Length = 462 Score = 84.8 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 18/95 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--------------- 46 + LF G GG+ L Q+ F++++ ++ TY N Sbjct: 4 YTVVSLFSGAGGLDLGFVQSGR---YRMLFANDVLSSALTTYAKNLDLKLELCSSRRTEA 60 Query: 47 FPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81 P + D+A++ + D DV++ G PCQ FS Sbjct: 61 RPGVALVCDVAEVDFAPLGDVDVIVGGPPCQDFSI 95 >gi|51892448|ref|YP_075139.1| site-specific DNA-methyltransferase [Symbiobacterium thermophilum IAM 14863] gi|51856137|dbj|BAD40295.1| site-specific DNA-methyltransferase [Symbiobacterium thermophilum IAM 14863] Length = 486 Score = 84.8 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 45/98 (45%), Gaps = 21/98 (21%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFG----DI 56 ++ DLF G GG+ L ++ E + E++P++ +++ NF + DI Sbjct: 14 RVLDLFAGCGGLSLGFQRA----GFEILAAVEMDPHAARSHAINFHPGDRFDLHAKPRDI 69 Query: 57 AKIKTQDI-----PD------HDVLLAGFPCQPFSQAG 83 ++ + + P D+++ G PCQ +++ G Sbjct: 70 SQEQPDQVLGELYPGERAEDLVDIIIGGPPCQAYARVG 107 >gi|228989002|ref|ZP_04149032.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228770724|gb|EEM19259.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 445 Score = 84.8 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 10/84 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 + +F G GG+ + + + E++P + TY+ N P T ++ DI +K Sbjct: 15 VIGIFAGCGGLDMGF----FECDFNVQLAIELDPDACNTYKKNHPETEVWNRDIKTVKGD 70 Query: 63 DIPDHD-----VLLAGFPCQPFSQ 81 +I +LL G PCQ FS Sbjct: 71 EIRKQVGNKPLILLGGSPCQSFSI 94 >gi|283852745|ref|ZP_06370009.1| C-5 cytosine-specific DNA methylase [Desulfovibrio sp. FW1012B] gi|283571826|gb|EFC19822.1| C-5 cytosine-specific DNA methylase [Desulfovibrio sp. FW1012B] Length = 264 Score = 84.8 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 4/80 (5%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF G G + E + E +P++ + +P +F D+ I Q+ Sbjct: 14 VGSLFSGAGLGDIAAEAIGLSH----AWFCECDPFARSILERRWPGVPVFHDVRDIHAQN 69 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D+++ GFPCQ S AG Sbjct: 70 AKRVDIVIGGFPCQDISCAG 89 >gi|313677760|ref|YP_004055756.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] gi|312944458|gb|ADR23648.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] Length = 346 Score = 84.8 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 + DLFCG GG+ + + + +++T+ N N+ I D+ + Sbjct: 5 YNVIDLFCGCGGLSQGFIEA----DYNVILGIDHWKDAIETFNYNHKNSKGIVADLLNLD 60 Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83 Q+I + D+++ G PCQ FS AG Sbjct: 61 PQEIKTRYAIENVDLIVGGPPCQGFSIAG 89 >gi|148555377|ref|YP_001262959.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1] gi|148500567|gb|ABQ68821.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1] Length = 412 Score = 84.8 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK LF GIGG+ E + + EI+ S + N +I DI + T Sbjct: 9 LKAISLFTGIGGLDFGFEAA----GFDTAVALEIDKASCRVLGDNRDWPIIGEDIHDVGT 64 Query: 62 Q--------DIPDHDVLLAGFPCQPFSQAG 83 ++ + D+L+ G PCQPFS++G Sbjct: 65 PRLLQAANLEVGEADILIGGPPCQPFSKSG 94 >gi|325969823|ref|YP_004246015.1| DNA-cytosine methyltransferase [Vulcanisaeta moutnovskia 768-28] gi|323709026|gb|ADY02513.1| DNA-cytosine methyltransferase [Vulcanisaeta moutnovskia 768-28] Length = 329 Score = 84.8 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 10/84 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + DLF G GG + EI+ + +TY NFP+ ++ DI I+ + Sbjct: 5 VIDLFAGAGGFSRGFLDA----GFDVVLGIEIDINAARTYSYNFPDAVMLVDDIKNIRGE 60 Query: 63 DIPDH-----DVLLAGFPCQPFSQ 81 D+ + DV++ G PC+ F++ Sbjct: 61 DVIKYIGDKPDVVIGGSPCEAFTE 84 >gi|91213886|ref|YP_543872.1| hypothetical protein UTI89_C4938 [Escherichia coli UTI89] gi|110644679|ref|YP_672409.1| modification methylase [Escherichia coli 536] gi|191170832|ref|ZP_03032384.1| modification methylase HgiDII [Escherichia coli F11] gi|300974517|ref|ZP_07172633.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1] gi|91075460|gb|ABE10341.1| hypothetical protein UTI89_C4938 [Escherichia coli UTI89] gi|110346271|gb|ABG72508.1| modification methylase [Escherichia coli 536] gi|190909056|gb|EDV68643.1| modification methylase HgiDII [Escherichia coli F11] gi|300308872|gb|EFJ63392.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1] gi|307629406|gb|ADN73710.1| DNA-cytosine methyltransferase [Escherichia coli UM146] gi|315290903|gb|EFU50272.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 153-1] gi|324010993|gb|EGB80212.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 60-1] Length = 348 Score = 84.8 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 14/90 (15%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M+ + D FCG GG L Q + +I+ + +T++ANFP+ I DI KI Sbjct: 1 MI-VIDFFCGCGGASEGLRQA----GFDIELGLDIDQQASETFKANFPDAKFIQDDIRKI 55 Query: 60 KTQDIPD-HDV-------LLAGFPCQPFSQ 81 + QDI D D+ L A PCQPFSQ Sbjct: 56 EPQDISDIIDIKAKRPLLLSACAPCQPFSQ 85 >gi|257440558|ref|ZP_05616313.1| type II DNA modification methyltransferase [Faecalibacterium prausnitzii A2-165] gi|257196997|gb|EEU95281.1| type II DNA modification methyltransferase [Faecalibacterium prausnitzii A2-165] Length = 297 Score = 84.8 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGGI L E E + +++P F DI + Sbjct: 3 LTHFSLFSGIGGIDLAAEAA----GFTSVCQCEWAAFPAAVLASHWPEVPRFQDITTVTK 58 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + ++ GFPCQPFS AG Sbjct: 59 EAFFEKTGLRTVTLISGGFPCQPFSTAG 86 >gi|240143270|ref|ZP_04741871.1| modification methylase BspRI [Roseburia intestinalis L1-82] gi|257204748|gb|EEV03033.1| modification methylase BspRI [Roseburia intestinalis L1-82] Length = 432 Score = 84.8 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 41/107 (38%), Gaps = 28/107 (26%) Query: 3 KITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINPY 38 + LF G GG+ L E N+ + ++I Sbjct: 59 NLLSLFSGCGGLDLGFELAGLKAVMGEEVMEAAFADKKVFDENINNNVFNTIYVNDIFDE 118 Query: 39 SVKTYQANFPNTLIFG--DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + +TY N + DI KIK + P D++L GFPC FS+AG Sbjct: 119 ARETYAQNAGKYIYMDKSDIRKIK--EFPKADIVLGGFPCPGFSEAG 163 >gi|254442311|ref|ZP_05055787.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae bacterium DG1235] gi|198256619|gb|EDY80927.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae bacterium DG1235] Length = 338 Score = 84.8 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 6/66 (9%) Query: 24 HRNVECFFSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQ 77 EC SEINP + +TY+ + L GD+ KI D PD DV+L GFPCQ Sbjct: 25 KLGGECVGYSEINPKAKRTYRMLHELDTLWEPQLDLGDLTKINPNDAPDFDVMLGGFPCQ 84 Query: 78 PFSQAG 83 FS G Sbjct: 85 TFSIVG 90 >gi|328471744|gb|EGF42621.1| putative C-5 cytosine-specific DNA methylase [Vibrio parahaemolyticus 10329] Length = 392 Score = 84.4 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 19/95 (20%) Query: 1 ML-KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------PNTLIF 53 ML K DLF G GG L ++ +E + E++ + +TYQ+N +++ Sbjct: 1 MLHKAIDLFSGAGGFSL----AAHNLGLEIVAAIELDKTASQTYQSNLVERLGQKTSILN 56 Query: 54 GDIAKIKTQD--------IPDHDVLLAGFPCQPFS 80 DI I ++ I + ++L G PCQ FS Sbjct: 57 EDILSIDPEELRKSLGINIGELSIILGGPPCQGFS 91 >gi|325695618|gb|EGD37518.1| modification methylase SinI [Streptococcus sanguinis SK150] Length = 471 Score = 84.4 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K F G G+ + +E ++ + EIN + T N + GDI + Sbjct: 74 IKALSFFSGGMGLDIGMENA----GIKPLLACEINKEARATIVENNTEIGLIGDIWQCSK 129 Query: 62 QDI---------PDHDVLLAGFPCQPFSQAG 83 ++I DV+ G PCQ FS AG Sbjct: 130 EEIYKYANLDKNTSIDVVFGGPPCQAFSTAG 160 >gi|9632187|ref|NP_049039.1| hypothetical protein PBCV1_A683L [Paramecium bursaria Chlorella virus 1] gi|2447129|gb|AAC96987.1| nonfunctional M.CviAV cytosine DNA methyltransferase [Paramecium bursaria Chlorella virus 1] Length = 367 Score = 84.4 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + +LF GI GI L EIN + K + F + +F D+ K Sbjct: 3 FRTLELFAGIAGISHGLRGIS-----TPVAFVEINEDAQKFLKTKFSDASVFNDVTKFTK 57 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 D P D D++ AGFPC FS AG Sbjct: 58 SDFPEDIDMITAGFPCTGFSIAG 80 >gi|54022198|ref|YP_116440.1| putative DNA cytosine methyltransferase [Nocardia farcinica IFM 10152] gi|54013706|dbj|BAD55076.1| putative DNA cytosine methyltransferase [Nocardia farcinica IFM 10152] Length = 382 Score = 84.4 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 7/82 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ LF GIGG+ L L C EI+P + A FP+T + DI ++ Sbjct: 5 RMVGLFAGIGGLELGLAA----HGWTCELLCEIDPGAQAVLGARFPDTDLHADITALRA- 59 Query: 63 DIP-DHDVLLAGFPCQPFSQAG 83 +P +++ AGFPCQ SQAG Sbjct: 60 -VPAGTELVAAGFPCQDLSQAG 80 >gi|309790027|ref|ZP_07684601.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6] gi|308227882|gb|EFO81536.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6] Length = 438 Score = 84.4 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 11/86 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-KTQD 63 DLFCG GG+ L E N + P +V T++ NF + I DI +I ++ Sbjct: 60 LDLFCGAGGMSLGFESG----NFFVAAGIDAEPAAVMTHKYNFLSKGIACDIREISDPRE 115 Query: 64 I------PDHDVLLAGFPCQPFSQAG 83 + P DV++ G PCQ F++ G Sbjct: 116 LLATLGLPRVDVIIGGPPCQGFARIG 141 >gi|167746050|ref|ZP_02418177.1| hypothetical protein ANACAC_00745 [Anaerostipes caccae DSM 14662] gi|167654565|gb|EDR98694.1| hypothetical protein ANACAC_00745 [Anaerostipes caccae DSM 14662] Length = 615 Score = 84.4 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L + ++SEI P+ ++ P +GDI+K+ Sbjct: 6 LTLGSLFDGSGGFPLG----GLISGITPLWASEIEPFPIRVTTKRLPQVKHYGDISKMNG 61 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+ D++ G PCQ S AG Sbjct: 62 ADLKPVDIITFGSPCQDMSIAG 83 >gi|157953073|ref|YP_001497965.1| hypothetical protein NY2A_B769R [Paramecium bursaria Chlorella virus NY2A] gi|155123300|gb|ABT15168.1| hypothetical protein NY2A_B769R [Paramecium bursaria Chlorella virus NY2A] Length = 362 Score = 84.4 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK +LF GI GI L + F VE EIN + + FP+ +F D+ K Sbjct: 3 LKALELFAGIAGITHGL-RGF----VEPVAFVEINKDAQEFLSTKFPDKPVFDDVTKFSK 57 Query: 62 QDI-PDHDVLLAGFPCQPFSQAG 83 +D D++ GFPC FS AG Sbjct: 58 RDFDEPIDMITGGFPCTGFSIAG 80 >gi|160934346|ref|ZP_02081733.1| hypothetical protein CLOLEP_03217 [Clostridium leptum DSM 753] gi|156867019|gb|EDO60391.1| hypothetical protein CLOLEP_03217 [Clostridium leptum DSM 753] Length = 433 Score = 84.4 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +LF G GG+ L +E+ + E + + T + N PN +I DIA I Sbjct: 101 FSTIELFAGAGGLALGIEEA----GFDTIGLIEFDKAASDTLKCNRPNWRVINDDIANIS 156 Query: 61 TQDIPDH--------DVLLAGFPCQPFSQAG 83 D+ ++ D+L G PCQ FS AG Sbjct: 157 CLDLEEYFNIKKGELDLLSGGAPCQAFSYAG 187 >gi|228947350|ref|ZP_04109643.1| hypothetical protein bthur0007_34800 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228812349|gb|EEM58677.1| hypothetical protein bthur0007_34800 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 290 Score = 84.4 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 6/70 (8%) Query: 16 LDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKIKTQDIPDHDVLLAG 73 + +EQ + +C E + ++ K+Y+A + DI+ I ++IP D G Sbjct: 1 MGMEQAGH----KCLGYVEWDKFARKSYEAIHDTGEEWTWNDISTIDYRNIPKSDCWTFG 56 Query: 74 FPCQPFSQAG 83 FPCQ S G Sbjct: 57 FPCQDISIGG 66 >gi|224541047|ref|ZP_03681586.1| hypothetical protein CATMIT_00198 [Catenibacterium mitsuokai DSM 15897] gi|224526044|gb|EEF95149.1| hypothetical protein CATMIT_00198 [Catenibacterium mitsuokai DSM 15897] Length = 418 Score = 84.4 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 21/102 (20%) Query: 2 LKITDLFCGIGGIRLDL---------EQTFNHRNVECFFSSEINPY-----SVKTYQANF 47 L + +LF G+GG R+ L ++ +RN + ++++ P + Y F Sbjct: 3 LTVVELFAGVGGFRVGLNDIKSFDENDKAIENRNWKFVWANQFEPSTKTQPAYNCYCTRF 62 Query: 48 PNTLIFG-DIAKI------KTQDIPDHDVLLAGFPCQPFSQA 82 DI + T IP+H +L+ GFPCQ +S A Sbjct: 63 GEEHTSNTDIQEEVAHLDEDTDYIPNHSLLVGGFPCQDYSVA 104 >gi|213618692|ref|ZP_03372518.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 151 Score = 84.4 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 8/63 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFG-DIA 57 + DLF GIGGIR E +C F+SE N ++V+TY+AN+ P F DI Sbjct: 91 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146 Query: 58 KIK 60 I Sbjct: 147 DIT 149 >gi|325069024|ref|ZP_08127697.1| modification methylase XorII [Actinomyces oris K20] Length = 201 Score = 84.4 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +++ DLF G GG+ + + E++P + +Y+A FP T ++ G I Sbjct: 6 IRVLDLFAGAGGLTAGFHTASSR--FRSIAAVEMDPEAAASYRATFPKTEVYAGAIQDWL 63 Query: 61 TQ-DIP-DHDVLLAGFPCQPFSQAG 83 + IP DV++ G PCQ FS G Sbjct: 64 AEGKIPTGVDVVVGGPPCQGFSTLG 88 >gi|282899425|ref|ZP_06307392.1| DNA-cytosine methyltransferase [Cylindrospermopsis raciborskii CS-505] gi|281195689|gb|EFA70619.1| DNA-cytosine methyltransferase [Cylindrospermopsis raciborskii CS-505] Length = 384 Score = 84.4 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQD 63 +LF G GG+ LE E++ + T N+ + LI+ D+ K K ++ Sbjct: 9 LELFAGAGGLAKGLEMAKIKHKALI----ELDYNACLTLANNYNHQLIYNVDVRKFKFEE 64 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 + + D++ G PCQPFS G Sbjct: 65 VGEVDIIAGGPPCQPFSLGG 84 >gi|314055145|ref|YP_004063483.1| putative cytosine-specific methyltransferase [Ostreococcus tauri virus 2] gi|313575036|emb|CBI70049.1| putative cytosine-specific methyltransferase [Ostreococcus tauri virus 2] Length = 349 Score = 84.4 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 9/84 (10%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 LF G GG L + ++ SE+ +T++ NF N LI GDI KI +D Sbjct: 7 LSLFSGCGGDTLGMTNA----GIDVVAYSELKTKFQETHELNFKNSKLIGGDINKITDED 62 Query: 64 IPD----HDVLLAGFPCQPFSQAG 83 D++ GFPCQ FS AG Sbjct: 63 FEKLSGKIDIIFGGFPCQSFSNAG 86 >gi|225571372|ref|ZP_03780368.1| hypothetical protein CLOHYLEM_07470 [Clostridium hylemonae DSM 15053] gi|225159848|gb|EEG72467.1| hypothetical protein CLOHYLEM_07470 [Clostridium hylemonae DSM 15053] Length = 479 Score = 84.4 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 13/88 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI---FGDIAK 58 DLF G GG+ L + + EI+ + Y+AN+ + I DI + Sbjct: 4 YNAIDLFSGCGGMTSGLIKA----GFNVIAAVEIDKNAASAYRANYKSNKIKLFEKDIRQ 59 Query: 59 IKTQDIPD------HDVLLAGFPCQPFS 80 + + DI + +L PCQ FS Sbjct: 60 VSSMDIYELLEGDVLHLLAGCPPCQGFS 87 >gi|153955901|ref|YP_001396666.1| hypothetical protein CKL_3292 [Clostridium kluyveri DSM 555] gi|219856251|ref|YP_002473373.1| hypothetical protein CKR_2908 [Clostridium kluyveri NBRC 12016] gi|146348759|gb|EDK35295.1| Phage-related protein [Clostridium kluyveri DSM 555] gi|219569975|dbj|BAH07959.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 302 Score = 84.4 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGGI L E + E Y + + ++P+ + D+ I Sbjct: 14 LTHFSLFTGIGGIDLAAEWA----GFKTVGQCEFADYPTRVLEKHWPDVERWKDVRSITV 69 Query: 62 QD-----IPDHDVLLAGFPCQPFSQAG 83 + I + VL AGFPCQP S AG Sbjct: 70 ESVRERGIQEVTVLSAGFPCQPHSVAG 96 >gi|295104078|emb|CBL01622.1| Site-specific DNA methylase [Faecalibacterium prausnitzii SL3/3] Length = 298 Score = 84.4 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGGI L E E + +++P F DI + Sbjct: 3 LTHFSLFSGIGGIDLAAEAA----GFTSVCQCEWAAFPAAVLASHWPEVPRFQDITTVTK 58 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + ++ GFPCQPFS AG Sbjct: 59 EAFFEKTGLRTVTLISGGFPCQPFSTAG 86 >gi|547931|sp|P36216|MTC1_PBCVI RecName: Full=Modification methylase CviJI; Short=M.CviJI; AltName: Full=Cytosine-specific methyltransferase CviJI gi|323315|gb|AAA88826.1| cytosine methyltransferase [Paramecium bursaria Chlorella virus IL3A] gi|483782|gb|AAC55063.1| cytosine methyltransferase [Chlorella virus] Length = 367 Score = 84.0 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + +LF GI GI L EIN + K + F + +F D+ K Sbjct: 3 FRTLELFAGIAGISHGLRGIS-----TPVAFVEINEDAQKFLKTKFSDASVFNDVTKFTK 57 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 D P D D++ AGFPC FS AG Sbjct: 58 SDFPEDIDMITAGFPCTGFSIAG 80 >gi|160945835|ref|ZP_02093061.1| hypothetical protein FAEPRAM212_03368 [Faecalibacterium prausnitzii M21/2] gi|158443566|gb|EDP20571.1| hypothetical protein FAEPRAM212_03368 [Faecalibacterium prausnitzii M21/2] Length = 298 Score = 84.0 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGGI L E E + +++P F DI + Sbjct: 3 LTHFSLFSGIGGIDLAAEAA----GFTSVCQCEWAAFPAAVLASHWPEVPRFQDITTVTK 58 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + ++ GFPCQPFS AG Sbjct: 59 EAFFEKTGLRTVTLISGGFPCQPFSTAG 86 >gi|255283692|ref|ZP_05348247.1| C-5 cytosine-specific DNA methylase family protein [Bryantella formatexigens DSM 14469] gi|255265757|gb|EET58962.1| C-5 cytosine-specific DNA methylase family protein [Bryantella formatexigens DSM 14469] Length = 461 Score = 84.0 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 19/99 (19%) Query: 3 KITDLFCGIGGIRLDL------EQTFNHRNVECFFSSEINP------YSVKTYQANFPNT 50 + +LF G+GG R L E + + S+ P Y+ Y F Sbjct: 4 TVCELFAGVGGFRCGLNNIRTAEDYGKEEKWDTVWFSQWEPAEKSTQYAHDCYVYRFGTR 63 Query: 51 LIFG-------DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 L +I + +PD ++L+ GFPCQ +S A Sbjct: 64 LDKNGEDTTNYNIEDVDKTTLPDFNLLVGGFPCQDYSVA 102 >gi|256847840|ref|ZP_05553285.1| DNA-cytosine methyltransferase [Lactobacillus coleohominis 101-4-CHN] gi|256715529|gb|EEU30505.1| DNA-cytosine methyltransferase [Lactobacillus coleohominis 101-4-CHN] Length = 349 Score = 84.0 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 6/88 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANF----PNTLIFGD 55 K+ +LFCG GG+ L + + ++++ + + +TY N P ++ D Sbjct: 3 YKLGELFCGPGGLALGAKTADIGNGDQIVHAWANDFDKDTCETYIHNICPENPESVYCED 62 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + K + D L GFPC FS G Sbjct: 63 VRKFDLTQLTPIDGLAFGFPCNDFSVVG 90 >gi|257440380|ref|ZP_05616135.1| type II DNA modification methyltransferase [Faecalibacterium prausnitzii A2-165] gi|257197226|gb|EEU95510.1| type II DNA modification methyltransferase [Faecalibacterium prausnitzii A2-165] Length = 298 Score = 84.0 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGGI L E E + +++P F DI + Sbjct: 3 LTHFSLFSGIGGIDLAAEAA----GFTSVCQCEWAAFPAAVLASHWPEVPRFQDITTVTK 58 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + ++ GFPCQPFS AG Sbjct: 59 EAFFEKTGLRTVTLISGGFPCQPFSTAG 86 >gi|291557370|emb|CBL34487.1| Site-specific DNA methylase [Eubacterium siraeum V10Sc8a] Length = 361 Score = 84.0 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIG L + + ++SEI + + +FP+ + GDI K+ Sbjct: 4 IKLGSLFDGIGVFPLAASRC----GIRPAWASEIEKAPISITKRHFPDMVHLGDITKVDG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP V+ G PCQ S G Sbjct: 60 GKIPPVHVITFGSPCQNLSLIG 81 >gi|261420917|ref|YP_003254598.1| DNA-cytosine methyltransferase [Geobacillus sp. Y412MC61] gi|319768595|ref|YP_004134095.1| DNA-cytosine methyltransferase [Geobacillus sp. Y412MC52] gi|261377375|gb|ACX80116.1| DNA-cytosine methyltransferase [Geobacillus sp. Y412MC61] gi|317113461|gb|ADU95952.1| DNA-cytosine methyltransferase [Geobacillus sp. Y412MC52] Length = 370 Score = 84.0 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 11/94 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQT------FNHRNVECFFSSEINPYSVKTYQANF---PNTL 51 + + +LF G GG+ L + +E ++++ N + +TY+ N P+ Sbjct: 2 IFRKGELFSGPGGLALGAKMARVVDADGEEFRIEHVWANDYNESACRTYRRNICGDPDDP 61 Query: 52 --IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I D+ ++ + +P D L GFPC +S G Sbjct: 62 SVIACDVRELDIEQLPRIDALSFGFPCNDYSVVG 95 >gi|160881053|ref|YP_001560021.1| DNA-cytosine methyltransferase [Clostridium phytofermentans ISDg] gi|160429719|gb|ABX43282.1| DNA-cytosine methyltransferase [Clostridium phytofermentans ISDg] Length = 537 Score = 84.0 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 12/87 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----IA 57 +K+ D FCG GG Q + F+ + +V TY+AN P + D I+ Sbjct: 1 MKVADFFCGAGGFSEGFRQA----GFDIVFAVDKWLPAVNTYKANKPMVNVIQDDVIRIS 56 Query: 58 KIKTQDI----PDHDVLLAGFPCQPFS 80 + ++ PD +V++ PC FS Sbjct: 57 NLPDEEFEKLVPDTEVIIGSPPCVAFS 83 >gi|86137701|ref|ZP_01056277.1| DNA modification methylase M.NGOI [Roseobacter sp. MED193] gi|85825293|gb|EAQ45492.1| DNA modification methylase M.NGOI [Roseobacter sp. MED193] Length = 319 Score = 84.0 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIA-- 57 ML +L G GG L LE+ + EI+ + T + N PN ++ D+ Sbjct: 1 MLTSVELCAGAGGQALGLERA----GFDHTALVEIDKHCCATLRHNRPNWNVLEEDLRLF 56 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 K D+L G PC PFS AG Sbjct: 57 KDDASAYKGIDLLAGGLPCPPFSVAG 82 >gi|309789605|ref|ZP_07684186.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6] gi|308228341|gb|EFO81988.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6] Length = 342 Score = 84.0 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 11/84 (13%) Query: 2 LKITDLFCGIGGIRLDLE-QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + + DLF G GG+ L E Q E +P + +TY N + ++ Sbjct: 21 ISVLDLFAGCGGLALGFEAQGLKTHGF------EKDPDAAQTYCNNLGSPCEH---VELS 71 Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83 + P DV++ G PCQPFS G Sbjct: 72 IDTVYPQADVVIGGPPCQPFSVGG 95 >gi|312200730|ref|YP_004020791.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c] gi|311232066|gb|ADP84921.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c] Length = 464 Score = 84.0 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 10/85 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGD-----I 56 K+ DLFCG GG+ + E +++ +P + TY+ NF ++ GD + Sbjct: 34 KLVDLFCGAGGLSEGFRR----VGFEVVAAADHDPDACATYERNFARAEVLCGDLRLPAL 89 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQ 81 + D+++ G PCQ +SQ Sbjct: 90 RERLVDLAAGADMIVGGPPCQAYSQ 114 >gi|304383358|ref|ZP_07365824.1| site-specific DNA-methyltransferase [Prevotella marshii DSM 16973] gi|304335526|gb|EFM01790.1| site-specific DNA-methyltransferase [Prevotella marshii DSM 16973] Length = 478 Score = 84.0 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 8/87 (9%) Query: 1 MLKIT---DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA 57 M + LF GIG E + F EI+ + +PN++ + +I Sbjct: 1 MKRFIMHASLFSGIG----APELAAFWLGWQNVFHCEISEFCNTILNYWYPNSIGYENIK 56 Query: 58 KIKTQDI-PDHDVLLAGFPCQPFSQAG 83 + DVL GFPCQPFS AG Sbjct: 57 QADFSKWQGKIDVLTGGFPCQPFSSAG 83 >gi|254416651|ref|ZP_05030402.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196176617|gb|EDX71630.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 428 Score = 84.0 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 27/102 (26%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQD 63 DLF G+GG L +EQ + + E +P Y+ NFP ++ D+ ++ Sbjct: 11 IDLFAGVGGFSLGIEQA----GFDVAIAVEKDPIHAAVYKFNFPQTHVLCADVTELTGTH 66 Query: 64 IP----------------------DHDVLLAGFPCQPFSQAG 83 I D +++ G PCQ FS G Sbjct: 67 IQKALRNWCDRQKRPVRVSDRDRMDINLVFGGPPCQGFSVMG 108 >gi|254467362|ref|ZP_05080773.1| DNA-cytosine methyltransferase [Rhodobacterales bacterium Y4I] gi|206688270|gb|EDZ48752.1| DNA-cytosine methyltransferase [Rhodobacterales bacterium Y4I] Length = 319 Score = 84.0 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 ML +L G GG L LE + EI+ + T + N P ++ D+ K Sbjct: 1 MLTSVELCAGAGGQALGLEAA----GFDHTALVEIDKHCCATLRHNRPAWNVLEEDVRKF 56 Query: 60 K--TQDIPDHDVLLAGFPCQPFSQAG 83 K D D+L G PC PFS AG Sbjct: 57 KEVAGDYKGIDLLAGGLPCPPFSVAG 82 >gi|290343528|ref|YP_003494895.1| hypothetical protein OTV1_055 [Ostreococcus tauri virus 1] gi|260160943|emb|CAY39643.1| hypothetical protein OTV1_055 [Ostreococcus tauri virus 1] Length = 351 Score = 84.0 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 9/84 (10%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 LF G GG L + V+ SE+ +T++ NF N LI GDI KI +D Sbjct: 9 LSLFSGCGGDTLGMVNA----GVDVVAYSELKTKFQETHELNFKNSKLIGGDINKITDED 64 Query: 64 IPD----HDVLLAGFPCQPFSQAG 83 D++ GFPCQ FS AG Sbjct: 65 FEKLSGKIDIIFGGFPCQSFSNAG 88 >gi|144952808|gb|ABP04058.1| DNA methyltransferase 2 [Macrobrachium rosenbergii] Length = 396 Score = 84.0 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+I +L+ GIGG+R+ +++ + S EIN +++ YQ NFP T +I + Sbjct: 10 LRILELYSGIGGMRVAAKESG--LQFDIVGSYEINTTALEVYQHNFPKTPKAYNIMGLTL 67 Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83 + DV++ PCQPF++ G Sbjct: 68 DHLESLSPDVIMMSPPCQPFTRQG 91 >gi|179506952|gb|ACB86652.1| EagI methylase [Pantoea agglomerans] Length = 401 Score = 83.7 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 13/86 (15%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 DLF G GG+ L+ + F++E+ P +TY N PN ++ GDI I + Sbjct: 8 LDLFAGAGGLTCGLDMA----GFQSIFANELVPVYAETYSKNHPNAEMVVGDIRAIAESN 63 Query: 64 I--------PDHDVLLAGFPCQPFSQ 81 + + D+L G PCQ FS Sbjct: 64 LMKSLGLKAGELDLLAGGPPCQGFSI 89 >gi|269119458|ref|YP_003307635.1| DNA-cytosine methyltransferase [Sebaldella termitidis ATCC 33386] gi|268613336|gb|ACZ07704.1| DNA-cytosine methyltransferase [Sebaldella termitidis ATCC 33386] Length = 383 Score = 83.7 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 6/85 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 M ++ + F GI Q + + E + EI+ ++++ + N GDI+K Sbjct: 1 MPRVVEAFSGI----RSQTQALKNLGIDHEVVATFEIDKWAIEMAKLLHGNVNNLGDISK 56 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + +++P+HD+ FPCQ S AG Sbjct: 57 VDPKEVPEHDLFTYTFPCQDISTAG 81 >gi|317506898|ref|ZP_07964670.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] gi|316254826|gb|EFV14124.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] Length = 331 Score = 83.7 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L + ++ G GG LE + EI+ + T Q N P+ + GD+ ++ Sbjct: 7 LSVLEICAGAGGQSSGLEMA----GFGHALAVEIDKDAAATLQLNRPSWDVHEGDVREVN 62 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++ D+L G PC PFS AG Sbjct: 63 GREYKGVDLLAGGVPCPPFSIAG 85 >gi|127416|sp|P10283|MTB1_BREEP RecName: Full=Modification methylase BepI; Short=M.BepI; AltName: Full=Cytosine-specific methyltransferase BepI gi|580766|emb|CAA31907.1| unnamed protein product [Brevibacterium epidermidis] Length = 403 Score = 83.7 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 43/122 (35%), Gaps = 40/122 (32%) Query: 2 LKITDLFCGIGGIRLDLEQTF--------------------------NHRNVECFFSSEI 35 +K+ LF G GG+ L LE F E F+++I Sbjct: 1 MKVLSLFSGCGGMDLGLEGGFLAHRSSINSDLYASYISDHDENYVYLKKTGFETVFANDI 60 Query: 36 NPYSVKTYQANFPNTL--------------IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81 P++ + F N + + +I + D DV+ GFPCQ FS Sbjct: 61 LPFAKLAWCNFFKNRVNQPENIFHLESIVDVVNNIENKQFSFPNDIDVVTGGFPCQDFSF 120 Query: 82 AG 83 AG Sbjct: 121 AG 122 >gi|328768493|gb|EGF78539.1| hypothetical protein BATDEDRAFT_13083 [Batrachochytrium dendrobatidis JAM81] Length = 350 Score = 83.7 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSS-EINPYSVKTYQANFPNTLIFGDIAKIK 60 L++ + F GIGG+ LE+ + +S ++N ++ YQ NF I + Sbjct: 5 LRVLEFFSGIGGLHYGLERAESTA---TVLASFDVNEHANSCYQHNFGIKPSNKSIDTLT 61 Query: 61 TQDIPDHD--VLLAGFPCQPFSQAG 83 +DI +D L PCQPF+Q G Sbjct: 62 AKDIEKYDSNCWLLSPPCQPFTQGG 86 >gi|210632067|ref|ZP_03297189.1| hypothetical protein COLSTE_01082 [Collinsella stercoris DSM 13279] gi|210159724|gb|EEA90695.1| hypothetical protein COLSTE_01082 [Collinsella stercoris DSM 13279] Length = 392 Score = 83.7 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 8/85 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61 I DLF G GG+ E + + E ++ Y NF ++ D+ + Sbjct: 4 TIVDLFAGCGGLSKGFELA----GFDVVAAYENWDSAIACYNLNFNHSAKQLDLNDVDAA 59 Query: 62 -QDIP--DHDVLLAGFPCQPFSQAG 83 Q+I ++ G PCQ FS AG Sbjct: 60 VQEIAPMKPTAIIGGPPCQDFSHAG 84 >gi|328772423|gb|EGF82461.1| hypothetical protein BATDEDRAFT_3612 [Batrachochytrium dendrobatidis JAM81] Length = 344 Score = 83.7 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSS-EINPYSVKTYQANFPNTLIFGDIAKIK 60 L++ + F GIGG+ LE+ + +S ++N ++ YQ NF I + Sbjct: 4 LRVLEFFSGIGGLHYGLERAESTA---TVLASFDVNEHANSCYQHNFGIKPSNKSIDTLT 60 Query: 61 TQDIPDHD--VLLAGFPCQPFSQAG 83 +DI +D L PCQPF+Q G Sbjct: 61 AKDIEKYDSNCWLLSPPCQPFTQGG 85 >gi|78776322|ref|YP_392637.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM 1251] gi|78496862|gb|ABB43402.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM 1251] Length = 395 Score = 83.7 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 31/113 (27%) Query: 2 LKITDLFCGIGGIRLDLEQTF-----------------------NHRNVECFFSSEINPY 38 +K+ F G GG+ + E F E F+ +I Sbjct: 4 IKVASFFSGCGGLDIGFEGDFETNSTSIRNKSWIQNTNEKKCKVKKTTFETVFACDIKKS 63 Query: 39 SVKTYQANFPNTLIFG-----D-IAKIKTQDI--PDHDVLLAGFPCQPFSQAG 83 + +++ F +F D I K + P D++ GFPCQ FS AG Sbjct: 64 AKIAWESYFKKENVFHLESIVDLIKKAHNNEFIFPHADIVTGGFPCQDFSIAG 116 >gi|281425045|ref|ZP_06255958.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Prevotella oris F0302] gi|281400889|gb|EFB31720.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Prevotella oris F0302] Length = 412 Score = 83.7 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++ LF GIG E + F EI+ + +PN++ + +I K Sbjct: 4 IITHASLFSGIG----APELAAFWLGWQNAFHCEISKFCNTILNYWYPNSIGYENIKKTD 59 Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83 DVL GFPCQPFS AG Sbjct: 60 FSKWQGKIDVLTGGFPCQPFSSAG 83 >gi|67922668|ref|ZP_00516173.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67855516|gb|EAM50770.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 282 Score = 83.7 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 10/86 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQ 62 + DLF G GG+ +Q E + ++ T+Q N P + I D+A + Sbjct: 9 LLDLFSGCGGLSYGFQQA----GFEVIAGIDNWKDALATFQKNHPTSQGILMDLAVASSS 64 Query: 63 DI-----PDHDVLLAGFPCQPFSQAG 83 I DV++ G PCQ FS +G Sbjct: 65 KISQQINKSIDVIVGGPPCQGFSISG 90 >gi|302873652|ref|YP_003842285.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|307686624|ref|ZP_07629070.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|302576509|gb|ADL50521.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] Length = 445 Score = 83.3 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 38/104 (36%), Gaps = 29/104 (27%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---------NTLIFGD 55 DLFCG GG+ L Q FSS+IN +TY GD Sbjct: 5 IDLFCGAGGMSEGLIQA----GFHILFSSDINEDVQRTYMNRHEQLGLLQGVNTHYHRGD 60 Query: 56 IAKIKTQDIP----------------DHDVLLAGFPCQPFSQAG 83 + ++ + I D D + G PCQ FS+AG Sbjct: 61 VRELTGEFIRNSIQNLAIFAEGSVPEDIDAIFGGPPCQGFSRAG 104 >gi|85703012|ref|ZP_01034116.1| DNA cytosine methyltransferase M.NgoMIII [Roseovarius sp. 217] gi|85671940|gb|EAQ26797.1| DNA cytosine methyltransferase M.NgoMIII [Roseovarius sp. 217] Length = 387 Score = 83.3 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 17/94 (18%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----------FPNT 50 M++ +LF G GG+ + + Q + + ++ T + N +P Sbjct: 1 MMRSVELFVGAGGLGIGVSQA----GFRPAAVMDWDRWACDTLRENKERGLDPIAHWP-- 54 Query: 51 LIFGDIAKIKTQDI-PDHDVLLAGFPCQPFSQAG 83 + GDI + + D++ G PCQPFS G Sbjct: 55 IHEGDIRQFDFGTVDGTVDLVTGGPPCQPFSMGG 88 >gi|320109274|ref|YP_004184864.1| DNA-cytosine methyltransferase [Terriglobus saanensis SP1PR4] gi|319927795|gb|ADV84870.1| DNA-cytosine methyltransferase [Terriglobus saanensis SP1PR4] Length = 409 Score = 83.3 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 15/91 (16%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKT 61 K F G G+ L LEQ +C ++E + + T + N P+ ++ D+ + Sbjct: 8 KFVSFFAGARGLDLGLEQA----GWKCIAANEYDRAASDTIRLNEPDLPLYSEDVRNVTG 63 Query: 62 QDIPDHDV---------LLAGFPCQPFSQAG 83 + + D+ ++ G PCQ FS AG Sbjct: 64 KRLMK-DLGVRPRELYAVVGGPPCQAFSTAG 93 >gi|194098027|ref|YP_002001075.1| methylase [Neisseria gonorrhoeae NCCP11945] gi|239998490|ref|ZP_04718414.1| methylase [Neisseria gonorrhoeae 35/02] gi|240013615|ref|ZP_04720528.1| methylase [Neisseria gonorrhoeae DGI18] gi|240016054|ref|ZP_04722594.1| methylase [Neisseria gonorrhoeae FA6140] gi|240080196|ref|ZP_04724739.1| methylase [Neisseria gonorrhoeae FA19] gi|240112409|ref|ZP_04726899.1| methylase [Neisseria gonorrhoeae MS11] gi|240115149|ref|ZP_04729211.1| methylase [Neisseria gonorrhoeae PID18] gi|240117433|ref|ZP_04731495.1| methylase [Neisseria gonorrhoeae PID1] gi|240120685|ref|ZP_04733647.1| methylase [Neisseria gonorrhoeae PID24-1] gi|240122989|ref|ZP_04735945.1| methylase [Neisseria gonorrhoeae PID332] gi|240125241|ref|ZP_04738127.1| methylase [Neisseria gonorrhoeae SK-92-679] gi|240127695|ref|ZP_04740356.1| methylase [Neisseria gonorrhoeae SK-93-1035] gi|254493209|ref|ZP_05106380.1| methylase [Neisseria gonorrhoeae 1291] gi|260441033|ref|ZP_05794849.1| methylase [Neisseria gonorrhoeae DGI2] gi|268594349|ref|ZP_06128516.1| methylase [Neisseria gonorrhoeae 35/02] gi|268596345|ref|ZP_06130512.1| methylase [Neisseria gonorrhoeae FA19] gi|268598472|ref|ZP_06132639.1| methylase [Neisseria gonorrhoeae MS11] gi|268600825|ref|ZP_06134992.1| methylase [Neisseria gonorrhoeae PID18] gi|268603130|ref|ZP_06137297.1| methylase [Neisseria gonorrhoeae PID1] gi|268681611|ref|ZP_06148473.1| methylase [Neisseria gonorrhoeae PID332] gi|268683839|ref|ZP_06150701.1| methylase [Neisseria gonorrhoeae SK-92-679] gi|268686080|ref|ZP_06152942.1| methylase [Neisseria gonorrhoeae SK-93-1035] gi|291044365|ref|ZP_06570074.1| methylase [Neisseria gonorrhoeae DGI2] gi|293399551|ref|ZP_06643704.1| methylase [Neisseria gonorrhoeae F62] gi|193933317|gb|ACF29141.1| methylase [Neisseria gonorrhoeae NCCP11945] gi|226512249|gb|EEH61594.1| methylase [Neisseria gonorrhoeae 1291] gi|268547738|gb|EEZ43156.1| methylase [Neisseria gonorrhoeae 35/02] gi|268550133|gb|EEZ45152.1| methylase [Neisseria gonorrhoeae FA19] gi|268582603|gb|EEZ47279.1| methylase [Neisseria gonorrhoeae MS11] gi|268584956|gb|EEZ49632.1| methylase [Neisseria gonorrhoeae PID18] gi|268587261|gb|EEZ51937.1| methylase [Neisseria gonorrhoeae PID1] gi|268621895|gb|EEZ54295.1| methylase [Neisseria gonorrhoeae PID332] gi|268624123|gb|EEZ56523.1| methylase [Neisseria gonorrhoeae SK-92-679] gi|268626364|gb|EEZ58764.1| methylase [Neisseria gonorrhoeae SK-93-1035] gi|291011259|gb|EFE03255.1| methylase [Neisseria gonorrhoeae DGI2] gi|291610120|gb|EFF39242.1| methylase [Neisseria gonorrhoeae F62] gi|317163768|gb|ADV07309.1| methylase [Neisseria gonorrhoeae TCDC-NG08107] Length = 112 Score = 83.3 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 7/73 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA-KIK 60 DLF GIGG R+ ++ + E FSSE + + TY+ANF FGDI + Sbjct: 40 FTFIDLFAGIGGFRIAMQ----NLGGEYVFSSEWDEKAKLTYEANFGEVP-FGDITLEEI 94 Query: 61 TQDIPD-HDVLLA 72 Q IP DVL Sbjct: 95 KQYIPKQFDVLCG 107 >gi|159030572|emb|CAO88235.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 426 Score = 83.3 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 15/90 (16%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQD 63 DLF G GG+ L LE + + E + + NFP I DIAK+ +++ Sbjct: 8 IDLFAGCGGMSLGLEAA----GFDIAVAVEFDAVHSLVHHFNFPYCQTICRDIAKVTSRE 63 Query: 64 IP----------DHDVLLAGFPCQPFSQAG 83 I D ++ G PCQ FS G Sbjct: 64 IWELLKLKGYATDVSLIAGGPPCQGFSLIG 93 >gi|217977517|ref|YP_002361664.1| DNA-cytosine methyltransferase [Methylocella silvestris BL2] gi|217502893|gb|ACK50302.1| DNA-cytosine methyltransferase [Methylocella silvestris BL2] Length = 393 Score = 83.3 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDI 64 + F G G R L +C F+++ + Y N+ N IFGD+AKI+ D+ Sbjct: 10 EFFAGGGMARAGL-----GDGWQCVFANDFSKMKAAAYIQNWGSNHFIFGDVAKIRPADM 64 Query: 65 PDH-DVLLAGFPCQPFSQAG 83 P D+ A FPCQ S AG Sbjct: 65 PGVADLAWASFPCQDLSLAG 84 >gi|157691352|ref|YP_001485814.1| DNA (cytosine-5-)-methyltransferase [Bacillus pumilus SAFR-032] gi|157680110|gb|ABV61254.1| possible DNA (cytosine-5-)-methyltransferase [Bacillus pumilus SAFR-032] Length = 261 Score = 83.3 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 13/90 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + +LF GIGGI L E +E E N + K NFP +F D+ K+ + Sbjct: 11 RSIELFAGIGGIALAAEMA----GIEVMVFCEQNDFCRKVLNKNFPGVPVFNDVKKLNRE 66 Query: 63 DIPD---------HDVLLAGFPCQPFSQAG 83 + + D++ G+PCQ S G Sbjct: 67 LLEEEGLINRNESIDIISGGYPCQGESVIG 96 >gi|297159196|gb|ADI08908.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1] Length = 664 Score = 83.3 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI-------- 56 DLF G GG+ L L++ + + + +++T+ ANFP + D+ Sbjct: 45 VDLFSGAGGLSLGLQRA----GWTTAAAVDFDERALETHAANFPGMSLRMDLGNPAERDR 100 Query: 57 -AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ D++ G PCQPFS+AG Sbjct: 101 LEQVLEPAKGKIDLVAGGPPCQPFSRAG 128 >gi|126740127|ref|ZP_01755817.1| DNA modification methylase M.NGOI [Roseobacter sp. SK209-2-6] gi|126718946|gb|EBA15658.1| DNA modification methylase M.NGOI [Roseobacter sp. SK209-2-6] Length = 319 Score = 83.3 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 ML +L G GG L LE+ + EI+ + T + N P+ ++ D+ Sbjct: 1 MLTSVELCAGAGGQALGLEKA----GFDHTALVEIDKHCCATLRHNRPSWNVLEEDVRNF 56 Query: 60 K--TQDIPDHDVLLAGFPCQPFSQAG 83 K + D+L G PC PFS AG Sbjct: 57 KEVAGNYRGIDLLAGGLPCPPFSVAG 82 >gi|310817513|ref|YP_003949871.1| cytosine-specific methyltransferase [Stigmatella aurantiaca DW4/3-1] gi|309390585|gb|ADO68044.1| Cytosine-specific methyltransferase [Stigmatella aurantiaca DW4/3-1] Length = 332 Score = 83.3 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L ++ G GG + L+ E + EI+ ++ T + N P + D+ Sbjct: 12 LTAIEICAGAGGQAIGLDMA----GFEHVAAVEIDKHACATLRLNRPQWRVFEEDLKDFS 67 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+L G PC PFS AG Sbjct: 68 GSSFRGVDLLAGGVPCPPFSIAG 90 >gi|166364460|ref|YP_001656733.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] gi|166086833|dbj|BAG01541.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] Length = 420 Score = 83.3 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 15/90 (16%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQD 63 DLF G GG+ L LE + + E + + NFP I DIAK+ +++ Sbjct: 8 IDLFAGCGGMSLGLEAA----GFDIAVAVEFDAVHSLVHHFNFPYCQTICRDIAKVTSRE 63 Query: 64 I----------PDHDVLLAGFPCQPFSQAG 83 I D ++ G PCQ FS G Sbjct: 64 ILELLKLKGYATDVSLIAGGPPCQGFSLIG 93 >gi|71893964|ref|YP_279410.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae J] gi|71852091|gb|AAZ44699.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae J] Length = 329 Score = 83.3 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 17/95 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------NTLIFGD 55 DLF G GG+ L S EI +V+TY NF D Sbjct: 15 YNFIDLFSGAGGLSCGLVMA----GFLPLASLEIMKQAVETYAYNFKKRSKNKELFKLSD 70 Query: 56 IAKIKTQ-DIPDH------DVLLAGFPCQPFSQAG 83 I K + + DH D++ GFPCQ FS AG Sbjct: 71 IRDSKIKSEFYDHFKDQELDLIAGGFPCQGFSMAG 105 >gi|307294815|ref|ZP_07574657.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1] gi|306879289|gb|EFN10507.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1] Length = 394 Score = 83.3 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 16/93 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----------FPNTL 51 ++ +LF G GG+ + + + + E + + T + N +P Sbjct: 7 MRAIELFAGAGGLGMGISKA----GFQPTQVVEWDRWCCDTLRENRQAKSGGIGHWP-LP 61 Query: 52 IFGDIAKIKT-QDIPDHDVLLAGFPCQPFSQAG 83 GDI + + D++ G PCQPFS G Sbjct: 62 TEGDIRLVDFRKHEGKIDLVTGGPPCQPFSLGG 94 >gi|289191821|ref|YP_003457762.1| DNA-cytosine methyltransferase [Methanocaldococcus sp. FS406-22] gi|288938271|gb|ADC69026.1| DNA-cytosine methyltransferase [Methanocaldococcus sp. FS406-22] Length = 310 Score = 83.3 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + DLF G GG N + + E VKTY N + DI +I Sbjct: 1 MNVIDLFSGCGGFSKGF----LDENFKILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPP 56 Query: 62 QDI------PDHDVLLAGFPCQPFSQA 82 + DV++ PC+PF++A Sbjct: 57 KAFDEFIKNEKVDVIIGSPPCEPFTKA 83 >gi|124027997|ref|YP_001013317.1| site-specific DNA methylase [Hyperthermus butylicus DSM 5456] gi|123978691|gb|ABM80972.1| Site-specific DNA methylase [Hyperthermus butylicus DSM 5456] Length = 319 Score = 83.3 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 9/86 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L++ DLF G GG + + NP ++++++ANFP + DI ++ Sbjct: 4 LRLVDLFSGAGGFAEGFRRA----GFRILLGVDNNPAAIRSFKANFPEAVALAMDIQEVT 59 Query: 61 TQDIPD----HDVLLAGFPCQPFSQA 82 + I DV++ PC+P++ A Sbjct: 60 GKLIESLVGPVDVVIGSPPCEPYTGA 85 >gi|328913308|gb|AEB64904.1| putative DNA (Cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens LL3] Length = 254 Score = 82.9 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K +LF GIGGI L E +E E P+ K NFP IF D + Sbjct: 1 MKSIELFAGIGGIALAAEWA----GIETVAFCEREPFCQKVLNKNFPGVPIFDDACAVNR 56 Query: 62 QDIPD---------HDVLLAGFPCQPFSQAG 83 Q + + +L G+PCQ S G Sbjct: 57 QLLEEKGVIEPGGTISILSGGYPCQGESVIG 87 >gi|86151502|ref|ZP_01069717.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni 260.94] gi|85841849|gb|EAQ59096.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni 260.94] Length = 187 Score = 82.9 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 11/90 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK-- 58 KI DLFCG GG EQ + N + + N ++++T++ N P+ +I GD+ Sbjct: 3 FKILDLFCGAGGFSNGFEQ---NENFKTIIGVDFNKFALETFKYNHPDSKVICGDLKDAL 59 Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83 I ++++ G PCQ FS G Sbjct: 60 VKSYIIDEAQKNGINMIIGGPPCQGFSSKG 89 >gi|79835456|gb|ABB52087.1| Mod [Arthrospira platensis] Length = 443 Score = 82.9 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIKTQD 63 DLF G GG+ ++ + F+++ + ++ T N P + + I + + Sbjct: 9 IDLFAGAGGMTTGF----KNQGFKLLFANDCDQAALATLSHNHPEAMTSSESIESLNPFE 64 Query: 64 IP--------DHDVLLAGFPCQPFSQAG 83 + D D+LL G PCQ FS G Sbjct: 65 LRQTLNLRKGDLDILLGGPPCQGFSTYG 92 >gi|257453711|ref|ZP_05618997.1| modification methylase Eco47II [Enhydrobacter aerosaccus SK60] gi|257448894|gb|EEV23851.1| modification methylase Eco47II [Enhydrobacter aerosaccus SK60] Length = 415 Score = 82.9 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Query: 23 NHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFS 80 + +E + Y+ +T +AN P+ +I DI + + D+L GFPCQPFS Sbjct: 99 EQAGFKSVLLNEKDKYACQTLRANRPDWNVIEDDITNVDFSHLKGQVDLLTGGFPCQPFS 158 Query: 81 QAG 83 AG Sbjct: 159 YAG 161 >gi|320120362|gb|EFE28316.2| DNA (cytosine-5-)-methyltransferase [Filifactor alocis ATCC 35896] Length = 363 Score = 82.9 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GIG L + ++ ++SEI + + +FPN GDI KIK Sbjct: 4 IKLGSLFDGIGVFPLAASRC----HIVPVWASEIEKVPMSITKRHFPNMEHLGDITKIKG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +I ++ G PCQ S AG Sbjct: 60 GEITPVHIITFGSPCQNLSLAG 81 >gi|145356149|ref|XP_001422300.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582541|gb|ABP00617.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 778 Score = 82.9 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 4/79 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF GIGG+ L LE+ + + E + + + + +P+ + D+A + Sbjct: 3 LRVASLFSGIGGLDLGLERAGH----DVVLRVERDAHCRELLRRQYPDGALMDDVAAVMP 58 Query: 62 QDIPDHDVLLAGFPCQPFS 80 +D+ D+L AGFPC S Sbjct: 59 RDLDGVDLLAAGFPCNDCS 77 >gi|312601558|gb|ADQ90813.1| Cytosine-specific methyltransferase [Mycoplasma hyopneumoniae 168] Length = 406 Score = 82.9 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 17/95 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------NTLIFGD 55 DLF G G+ L S EI +V+TY NF GD Sbjct: 92 YNFIDLFSGAAGLSCGLVMA----GFLPLASLEIMKQAVETYAYNFKKRSKNKELFKLGD 147 Query: 56 IA--KIKTQDIPDH-----DVLLAGFPCQPFSQAG 83 I KIK++ D++ GFPCQ FS AG Sbjct: 148 IRDSKIKSEFYNHFKDQELDLIAGGFPCQGFSMAG 182 >gi|257069715|ref|YP_003155970.1| DNA-methyltransferase Dcm [Brachybacterium faecium DSM 4810] gi|256560533|gb|ACU86380.1| DNA-methyltransferase Dcm [Brachybacterium faecium DSM 4810] Length = 431 Score = 82.9 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQD 63 DLF G GG+ L LEQ E S E +P ++ NFP D++K+ + Sbjct: 11 VDLFAGAGGLSLGLEQA----GFEIAASVEYDPIHAAVHEFNFPYGKTFASDVSKVTGEQ 66 Query: 64 I--------PDHDVLLAGFPCQPFSQAG 83 I + ++ G PCQ S G Sbjct: 67 IRRESEIGDREIHLVAGGPPCQGISMIG 94 >gi|315917412|ref|ZP_07913652.1| cytosine specific DNA methyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|313691287|gb|EFS28122.1| cytosine specific DNA methyltransferase [Fusobacterium gonidiaformans ATCC 25563] Length = 358 Score = 82.9 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 14/92 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-------NTLIFG 54 + DLF G GG+ + + + ++KT++ N + Sbjct: 9 FTVIDLFSGAGGLSKGFLDA----GFDVILGIDFDDSALKTFENNHGKAKALKLDLFNLD 64 Query: 55 DIAKIKTQDIPDH---DVLLAGFPCQPFSQAG 83 +I I ++ +H DVL+ G PCQ FS AG Sbjct: 65 NINYIISEFGREHNTLDVLVGGPPCQGFSLAG 96 >gi|284053383|ref|ZP_06383593.1| hypothetical protein AplaP_18124 [Arthrospira platensis str. Paraca] gi|291571237|dbj|BAI93509.1| type II DNA modification methyltransferase [Arthrospira platensis NIES-39] Length = 451 Score = 82.9 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIKTQD 63 DLF G GG+ ++ + F+++ + ++ T N P + + I + + Sbjct: 9 IDLFAGAGGMTTGF----KNQGFKLLFANDCDQAALATLSHNHPEAMTSSESIESLNPFE 64 Query: 64 IP--------DHDVLLAGFPCQPFSQAG 83 + D D+LL G PCQ FS G Sbjct: 65 LRQTLNLRKGDLDILLGGPPCQGFSTYG 92 >gi|313674498|ref|YP_004052494.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] gi|312941196|gb|ADR20386.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] Length = 735 Score = 82.9 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 14/96 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV-ECFFSSEINPYSVKTY--QANF----PNTLIFG 54 D F G GG Q ++ +S+IN T+ + N I Sbjct: 119 FTFVDFFAGAGGFSEGFLQAEHNNKFFNFLLASDINENCELTHLVRYNHQLGLDAEFIKQ 178 Query: 55 DIAKIKTQD-----IPD--HDVLLAGFPCQPFSQAG 83 DI + D + D DV+ G PCQ FS AG Sbjct: 179 DITEPDFVDNLLSKLGDKNVDVVCGGPPCQSFSLAG 214 >gi|126433434|ref|YP_001069125.1| DNA-cytosine methyltransferase [Mycobacterium sp. JLS] gi|126233234|gb|ABN96634.1| DNA-cytosine methyltransferase [Mycobacterium sp. JLS] Length = 349 Score = 82.9 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDIPDHDVLLAGFPC 76 + F + + FS E+N ++ TY ANF + + +GDI + ++P DV++ G PC Sbjct: 1 MTAGFKPQGFDPVFSVELNLHAAATYAANFGEDHIFWGDIDEALKGEVPHADVVIGGPPC 60 Query: 77 QPFSQAG 83 Q FS G Sbjct: 61 QGFSNLG 67 >gi|330985029|gb|EGH83132.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 422 Score = 82.9 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 8/84 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKIK 60 + + F G G R L +C F+++ +P + Y+ N+ L+ DI K+ Sbjct: 33 RFYEFFAGGGMARAGL-----GDGWDCLFANDFDPMKGRAYRDNWGGGLDLMVEDINKLT 87 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 T+ +PD D++ A FPCQ S AG Sbjct: 88 TEQLPDQADLVWASFPCQDLSLAG 111 >gi|241666957|ref|YP_002985041.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862414|gb|ACS60079.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 393 Score = 82.9 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 16/93 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----------FPNTL 51 ++ +LF G GG+ + + + E + + T + N +P Sbjct: 1 MRAIELFAGAGGLGMGVSRA----GFTPQAVVEWDRWCCDTIRENREKGIASLAGWP-MP 55 Query: 52 IFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 I GD+ + + D++ G PCQPFS G Sbjct: 56 IEGDVRGVNFRGFEGKLDLVTGGPPCQPFSLGG 88 >gi|300781468|ref|ZP_07091322.1| DNA (cytosine-5-)-methyltransferase [Corynebacterium genitalium ATCC 33030] gi|300533175|gb|EFK54236.1| DNA (cytosine-5-)-methyltransferase [Corynebacterium genitalium ATCC 33030] Length = 347 Score = 82.9 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 12/89 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK-- 60 ++ DLF G GG+ L + + + +++TY +NF + D+A Sbjct: 30 RVVDLFSGCGGLSLGFQAA----GFDVLAGFDHWEPAIETYNSNFGHHAEMLDLANFDKS 85 Query: 61 ------TQDIPDHDVLLAGFPCQPFSQAG 83 + + ++ G PCQ FS AG Sbjct: 86 AGRLGEFSALSEFPAIIGGPPCQDFSTAG 114 >gi|228899601|ref|ZP_04063856.1| Modification methylase SinI [Bacillus thuringiensis IBL 4222] gi|228860031|gb|EEN04436.1| Modification methylase SinI [Bacillus thuringiensis IBL 4222] Length = 362 Score = 82.9 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + F G GG+ + + + + S EI +T + N P+ ++ GDI Sbjct: 1 MNCISFFAGAGGLDMGIHKA----GFDVRVSVEIESVYCETLRMNHPDWNVVEGDIMMYN 56 Query: 61 TQDI--------PDHDVLLAGFPCQPFSQAG 83 + + + D+++ G PCQ FS AG Sbjct: 57 KEKVLEQANLKEGEVDLMIGGSPCQSFSTAG 87 >gi|298346372|ref|YP_003719059.1| DNA-cytosine methyltransferase [Mobiluncus curtisii ATCC 43063] gi|298236433|gb|ADI67565.1| DNA-cytosine methyltransferase [Mobiluncus curtisii ATCC 43063] Length = 508 Score = 82.5 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF G GG L +E ++SEI P+ + P GDI I Sbjct: 5 LRLGSLFDGSGGFPL----AATKVGIEPAWASEIEPFPILVTTTRLPQMQHLGDICNIDG 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + DV+ G PCQ S AG Sbjct: 61 SQLEPVDVVTFGSPCQDLSVAG 82 >gi|320101441|ref|YP_004177033.1| DNA-cytosine methyltransferase [Desulfurococcus mucosus DSM 2162] gi|319753793|gb|ADV65551.1| DNA-cytosine methyltransferase [Desulfurococcus mucosus DSM 2162] Length = 323 Score = 82.5 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 K D+F G GG L + + + + + +TY+ANFP+TL+ D+ + Sbjct: 5 YKYIDVFSGAGGFSLGFHLSGR---FKSLLAVDSFKPAAETYKANFPHTLVVNEDVKDLT 61 Query: 61 TQDI-----PD-HDVLLAGFPCQPFSQA 82 + + PD DV++ PC+PF+ A Sbjct: 62 GEILTGLVKPDEVDVVIGSPPCEPFTGA 89 >gi|257466254|ref|ZP_05630565.1| DNA (cytosine-5-)-methyltransferase [Fusobacterium gonidiaformans ATCC 25563] Length = 353 Score = 82.5 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 14/92 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-------NTLIFG 54 + DLF G GG+ + + + ++KT++ N + Sbjct: 4 FTVIDLFSGAGGLSKGFLDA----GFDVILGIDFDDSALKTFENNHGKAKALKLDLFNLD 59 Query: 55 DIAKIKTQDIPDH---DVLLAGFPCQPFSQAG 83 +I I ++ +H DVL+ G PCQ FS AG Sbjct: 60 NINYIISEFGREHNTLDVLVGGPPCQGFSLAG 91 >gi|86134515|ref|ZP_01053097.1| DNA (cytosine-5-)-methyltransferase [Polaribacter sp. MED152] gi|85821378|gb|EAQ42525.1| DNA (cytosine-5-)-methyltransferase [Polaribacter sp. MED152] Length = 583 Score = 82.5 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 9/84 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 L + D FCG GG Q + + ++ TY NF DI K K Sbjct: 4 LTVIDFFCGAGGFSEGFRQ----VGFKILEGFDNWQPAINTYNYNFDTESKLTDILKFKD 59 Query: 61 ----TQDIPDHDVLLAGFPCQPFS 80 ++PD D+++ PC FS Sbjct: 60 SLEEIDNLPDSDIIIGSPPCVSFS 83 >gi|72080942|ref|YP_288000.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae 7448] Length = 393 Score = 82.5 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 38/95 (40%), Gaps = 17/95 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------NTLIFGD 55 DLF G GG+ L S +I +V+TY NF GD Sbjct: 69 YNFIDLFSGAGGLSCGLVMA----GFLPLASLKIMKQAVETYAYNFKKRSKNKELFKLGD 124 Query: 56 IAKIKTQ-DIPDH------DVLLAGFPCQPFSQAG 83 I K + + DH D++ GFPCQ FS AG Sbjct: 125 IRDSKIKSEFYDHFKDQELDLIAGGFPCQGFSMAG 159 >gi|78047901|ref|YP_364076.1| putative cytosine-specific DNA methylase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036331|emb|CAJ24022.1| putative cytosine-specific DNA methylase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 333 Score = 82.5 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKI 59 M + F G G R L + +C +++ +P +Y AN+ + L GD+A + Sbjct: 1 MANFYEFFAGGGMARAGL-----GPDWQCLLANDFDPKKAASYAANWGTDHLRVGDVAAL 55 Query: 60 KTQDIP-DHDVLLAGFPCQPFSQAG 83 T D+P D+ A FPCQ S AG Sbjct: 56 TTADLPAGADLAWASFPCQDLSLAG 80 >gi|257386518|ref|YP_003176291.1| DNA-cytosine methyltransferase [Halomicrobium mukohataei DSM 12286] gi|257168825|gb|ACV46584.1| DNA-cytosine methyltransferase [Halomicrobium mukohataei DSM 12286] Length = 452 Score = 82.5 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L DLFCG GG+ L E + + + TY+AN + GDI + + Sbjct: 6 LTAIDLFCGAGGLSQGLHDA----GFETLWGIDHEENTKPTYEANHDCEMTVGDIREEEP 61 Query: 62 QDI----PDHDVLLAGFPCQPFSQAG 83 D+ + D++ G PC FS G Sbjct: 62 PDLGLEEGELDLVAGGPPCPTFSLVG 87 >gi|254456253|ref|ZP_05069682.1| Cytosine-specific methyltransferase HphIA [Candidatus Pelagibacter sp. HTCC7211] gi|207083255|gb|EDZ60681.1| Cytosine-specific methyltransferase HphIA [Candidatus Pelagibacter sp. HTCC7211] Length = 342 Score = 82.5 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 10/87 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDI 56 ML + D F G GG+ ++ + + + +KT+ NF + L GD Sbjct: 1 MLSVNDFFSGCGGLSQGFKEA----GFKIQVAVDKEEAFLKTFSHNFKDSQTKNLDLGDS 56 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + DIP D+++AG PCQ FS G Sbjct: 57 KTLN--DIPKSDIIIAGPPCQGFSITG 81 >gi|291457577|ref|ZP_06596967.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium breve DSM 20213] gi|291380630|gb|EFE88148.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium breve DSM 20213] Length = 191 Score = 82.5 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF GI + E +E+ P+ + ++PN D+ K+ Sbjct: 27 IRYISLFSGI----EAASVAWQPLGWEPIAYAEVEPFPKAVLKHHYPNVPDLRDMTKVNW 82 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 ++ DV++ G PCQ FS AG Sbjct: 83 KEYHHAADVVVGGSPCQAFSIAG 105 >gi|298492225|ref|YP_003722402.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708] gi|298234143|gb|ADI65279.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708] Length = 434 Score = 82.5 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 17/96 (17%) Query: 1 MLK----ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGD 55 M + DLF G GG+ L EQ + S E++P ++ NFP ++ Sbjct: 1 MFRQRPIAVDLFAGAGGMTLGFEQA----GFDVLVSVELDPIHCAIHKFNFPFWKVLCKS 56 Query: 56 IAKIKTQDIP--------DHDVLLAGFPCQPFSQAG 83 + + +I + DV+ G PCQ FS G Sbjct: 57 VEETTGSEIRNSSDIGNQEIDVVFGGPPCQGFSLIG 92 >gi|168697993|ref|ZP_02730270.1| DNA methyltransferase [Gemmata obscuriglobus UQM 2246] Length = 489 Score = 82.5 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ + GI ++ + F SEI+ + ++P+T GD I Sbjct: 1 MRYGSVCSGI----EAATAAWHPLGWQPIFFSEIDNFPRAVLAHHYPHTPCHGDFTTIGK 56 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+L+ G PCQ FS AG Sbjct: 57 DTYDPIDLLVGGTPCQSFSVAG 78 >gi|261402489|ref|YP_003246713.1| DNA-cytosine methyltransferase [Methanocaldococcus vulcanius M7] gi|261369482|gb|ACX72231.1| DNA-cytosine methyltransferase [Methanocaldococcus vulcanius M7] Length = 310 Score = 82.5 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + DLF G GG N + E VKTY N + DI +I Sbjct: 1 MNVIDLFSGCGGFSKGF----LDENFRILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPP 56 Query: 62 QDI------PDHDVLLAGFPCQPFSQA 82 + DV++ PC+PF++A Sbjct: 57 KAFDEFIKNEKVDVIIGSPPCEPFTKA 83 >gi|111021129|ref|YP_704101.1| DNA (cytosine-5-)-methyltransferase [Rhodococcus jostii RHA1] gi|110820659|gb|ABG95943.1| probable DNA (cytosine-5-)-methyltransferase [Rhodococcus jostii RHA1] Length = 392 Score = 82.5 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP- 65 LF GIGG+ L L + EI+P + + F + + D+ K+++ +P Sbjct: 15 LFAGIGGLELGLRE----HGWNTELLCEIDPGAQAVLRTQFTDVPVHSDVTKLRS--LPR 68 Query: 66 DHDVLLAGFPCQPFSQAG 83 D +++ AGFPCQ SQAG Sbjct: 69 DIELVAAGFPCQDLSQAG 86 >gi|15668743|ref|NP_247542.1| type II R/M system modification methyltransferase [Methanocaldococcus jannaschii DSM 2661] gi|2500153|sp|Q57983|MT51_METJA RecName: Full=Probable modification methylase MJ0563; AltName: Full=Cytosine-specific methyltransferase MJ0563; AltName: Full=M.MjaVIIIP gi|1591269|gb|AAB98555.1| modification methylase, type II R/M system [Methanocaldococcus jannaschii DSM 2661] Length = 310 Score = 82.5 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + DLF G GG N + E VKTY N + DI +I Sbjct: 1 MNVIDLFSGCGGFSKGF----LDENFRILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPP 56 Query: 62 QDI------PDHDVLLAGFPCQPFSQA 82 + DV++ PC+PF++A Sbjct: 57 KAFDEFIKNEKVDVIIGSPPCEPFTKA 83 >gi|170063953|ref|XP_001867327.1| DNA (cytosine-5)-methyltransferase [Culex quinquefasciatus] gi|167881402|gb|EDS44785.1| DNA (cytosine-5)-methyltransferase [Culex quinquefasciatus] Length = 345 Score = 82.5 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60 ++ +LF GIGG+ + + + EINP + Y NF P +I + Sbjct: 16 YRVLELFSGIGGMHYAIRRAGKP--FRVVAAMEINPVANTIYNHNFGPGAATNSNILSLT 73 Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83 + I +V+L PCQPF++ G Sbjct: 74 PERIDQLGANVILMSPPCQPFTRNG 98 >gi|328543334|ref|YP_004303443.1| DNA methylase, C-5 cytosine-specific family [polymorphum gilvum SL003B-26A1] gi|326415695|gb|ADZ72758.1| DNA methylase, C-5 cytosine-specific family [Polymorphum gilvum SL003B-26A1] Length = 418 Score = 82.5 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 13/87 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 + DLF G GG+ + ++++P + +T++ NFP + G ++K+ Sbjct: 23 RCVDLFAGAGGLAVGFRSA----GWGIVAGNDVDPDAAQTFRLNFPEASFFEGPVSKLAA 78 Query: 62 QDI--------PDHDVLLAGFPCQPFS 80 ++ D D L+ G PCQ FS Sbjct: 79 DELLADCGIERGDLDCLVGGPPCQSFS 105 >gi|304411687|ref|ZP_07393299.1| DNA-cytosine methyltransferase [Shewanella baltica OS183] gi|307306261|ref|ZP_07586006.1| DNA-cytosine methyltransferase [Shewanella baltica BA175] gi|304349875|gb|EFM14281.1| DNA-cytosine methyltransferase [Shewanella baltica OS183] gi|306911134|gb|EFN41561.1| DNA-cytosine methyltransferase [Shewanella baltica BA175] Length = 371 Score = 82.1 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 20/98 (20%) Query: 4 ITDLFCGIGGIRLD-LEQTFNHR-NVECFFSSEINPYSVKTYQANFPN---TLIFGDIAK 58 I DLF G GG+ L LE H+ + E+NP + TY+ NF L GDI++ Sbjct: 28 IVDLFSGCGGLTLGALEAARKHQLTCNIKLAVELNPEAANTYEENFSENLLNLHKGDISE 87 Query: 59 I-------KTQDIPD--------HDVLLAGFPCQPFSQ 81 I +I + DVLLAG PCQ S+ Sbjct: 88 IITNYPGDNISEIEEKVRFQNNNIDVLLAGPPCQGHSR 125 >gi|291539766|emb|CBL12877.1| DNA-methyltransferase (dcm) [Roseburia intestinalis XB6B4] Length = 366 Score = 82.1 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 16/93 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFG 54 DLF G GG+ + + + ++KT++ N N Sbjct: 5 FTCVDLFSGAGGLSRGF----YDAGYDVVLGVDFDEAALKTFRENHGNAEAMKLDLFNHD 60 Query: 55 DIAKI----KTQDIPDHDVLLAGFPCQPFSQAG 83 +I I + +DI DVL+ G PCQ FS AG Sbjct: 61 NINVIVDFLRERDI-KLDVLVGGPPCQGFSIAG 92 >gi|330936955|gb|EGH41063.1| HsdRM [Pseudomonas syringae pv. pisi str. 1704B] Length = 313 Score = 82.1 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 7/84 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M LF G GG + + + +++I Y+ + Y AN P T I G + I Sbjct: 1 MPSAVSLFSGCGGSDAGILRA----GFDVLMANDIMHYAREVYLANHPETDYIRGSVTTI 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 ++ P ++L+ +PCQ FSQ G Sbjct: 57 --ENFPAAELLVGCYPCQGFSQGG 78 >gi|90425781|ref|YP_534151.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB18] gi|90107795|gb|ABD89832.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB18] Length = 374 Score = 82.1 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 11/83 (13%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQD 63 DLF G G + L L+ + E+ ++ TY+AN P + D+ + Q Sbjct: 19 IDLFSGGGALTLGLKTA----GFRVVSAVEVEQHAFATYKANHPEVFAYKQDVRTVDGQS 74 Query: 64 IPDH------DVLLAGFPCQPFS 80 + H D+L PCQ F+ Sbjct: 75 LSMHAPRRKIDLLAGCPPCQGFT 97 >gi|302870555|ref|YP_003839192.1| C-5 cytosine-specific DNA methylase [Micromonospora aurantiaca ATCC 27029] gi|302573414|gb|ADL49616.1| C-5 cytosine-specific DNA methylase [Micromonospora aurantiaca ATCC 27029] Length = 183 Score = 82.1 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 +I + G GG+ + +E + + +E + ++ ++P+ GDI + Sbjct: 10 RIGSVCTGYGGLDMAVELV---LGGQLAWYAETDRHAATVLAHHWPDVDNLGDIRTVDWT 66 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D++ AGFPCQ S AG Sbjct: 67 QVAPVDIVTAGFPCQDISNAG 87 >gi|218848105|ref|YP_002454768.1| DNA-cytosine methyltransferase [Bacillus cereus G9842] gi|218546236|gb|ACK98629.1| DNA-cytosine methyltransferase [Bacillus cereus G9842] Length = 438 Score = 82.1 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 10/84 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 + +F G GG+ + + + E++ + TY+ N P T ++ DI +K Sbjct: 8 VIGIFSGCGGLDTGFSE----YDFNVQLAIELDSDACDTYKKNHPETEVWNRDIKTVKGD 63 Query: 63 DIPDHD-----VLLAGFPCQPFSQ 81 +I +LL G PCQ FS Sbjct: 64 EIRKLVGNKPLILLGGSPCQSFSI 87 >gi|213692399|ref|YP_002322985.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523860|gb|ACJ52607.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458540|dbj|BAJ69161.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 401 Score = 82.1 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF GI + + +EI P+ + ++P GD+ K+ Sbjct: 4 IRYISLFSGI----EAATVAWRQLGWKPIAYAEIEPFPKAVLRQHYPEVPDLGDMTKVDW 59 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 + DV++ G PCQ FS AG Sbjct: 60 KQYHHAADVVVGGSPCQAFSIAG 82 >gi|187923153|ref|YP_001894795.1| DNA-cytosine methyltransferase [Burkholderia phytofirmans PsJN] gi|187714347|gb|ACD15571.1| DNA-cytosine methyltransferase [Burkholderia phytofirmans PsJN] Length = 317 Score = 82.1 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 7/84 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 M LF G GG L +++I PY+ Y N P T G +A I Sbjct: 1 MPTAVSLFTGCGGSDAGL----VSLGFNVLMANDILPYARDVYLHNHPETDYRLGSVADI 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K+ P ++L+ +PCQ FSQ G Sbjct: 57 KS--FPKAELLVGCYPCQGFSQGG 78 >gi|239929797|ref|ZP_04686750.1| putative 5-methylcytosine methyltransferase [Streptomyces ghanaensis ATCC 14672] gi|291438128|ref|ZP_06577518.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291341023|gb|EFE67979.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 356 Score = 82.1 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI DLF G GG+ + E+ V E + + T +A + GD+ Sbjct: 5 KIVDLFAGPGGLDVAAEK----LGVPTVG-IEWDSAACATRRA-AGLETVEGDVRLYGPS 58 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 D P+ DVL G PCQ F+ AG Sbjct: 59 DFPEADVLAGGPPCQTFTVAG 79 >gi|320094594|ref|ZP_08026360.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. oral taxon 178 str. F0338] gi|319978509|gb|EFW10086.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. oral taxon 178 str. F0338] Length = 365 Score = 82.1 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 15/91 (16%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61 +I LF G GG+ L +Q F+ +++P +++T++ NF +T+ + D+ ++ + Sbjct: 36 RIVSLFSGAGGLDLGFQQA----GFPLSFAVDLSPAAIETHRRNFQDTVAVEADLTELGS 91 Query: 62 QDIPDH----------DVLLAGFPCQPFSQA 82 + +H ++ G PCQ FS+A Sbjct: 92 DGVLEHLAPILEPGESIGVIGGPPCQGFSRA 122 >gi|313115273|ref|ZP_07800751.1| C-5 cytosine-specific DNA methylase [Faecalibacterium cf. prausnitzii KLE1255] gi|310622412|gb|EFQ05889.1| C-5 cytosine-specific DNA methylase [Faecalibacterium cf. prausnitzii KLE1255] Length = 338 Score = 82.1 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGG+ L E E E Y + ++PN F DI Sbjct: 4 LTHVSLFSGIGGLDLAAEAA----GFETVCQCEWADYPYSILEQHWPNVPKFRDITTFTK 59 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + ++ GFPCQPFS G Sbjct: 60 EAFFEKTGLETVTIISGGFPCQPFSSVG 87 >gi|262280408|ref|ZP_06058192.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus RUH2202] gi|262258186|gb|EEY76920.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus RUH2202] Length = 354 Score = 82.1 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 15/90 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 +K+ D F G GG L Q ++ + + + +TY+ANFP + DI ++ Sbjct: 1 MKVIDFFSGCGGASEGLRQA----GLDIAIGLDFDKKASETYEANFPEAKFYNVDIRELD 56 Query: 61 TQDIPDH--DV--------LLAGFPCQPFS 80 +++ D+ L+A PCQPFS Sbjct: 57 EKELAAAFKDINQKEEPLLLVACAPCQPFS 86 >gi|238025826|ref|YP_002910057.1| DNA cytosine methyltransferase M.NgoMIII [Burkholderia glumae BGR1] gi|237875020|gb|ACR27353.1| DNA cytosine methyltransferase M.NgoMIII [Burkholderia glumae BGR1] Length = 407 Score = 82.1 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 14/92 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNT----LIF 53 +K +L+ G GG+ + + E + ++ T + N FP L Sbjct: 1 MKAVELYAGAGGLAMG----VGLAGFKPLAVVEWDRWACDTIRENQRRGFPLVADWPLYE 56 Query: 54 GDIAKIKTQDIP--DHDVLLAGFPCQPFSQAG 83 GD+ K + + D+L G PCQPFS G Sbjct: 57 GDVRKFDWSRLEGEEIDLLAGGPPCQPFSMGG 88 >gi|296110061|ref|YP_003617010.1| DNA-cytosine methyltransferase [Methanocaldococcus infernus ME] gi|295434875|gb|ADG14046.1| DNA-cytosine methyltransferase [Methanocaldococcus infernus ME] Length = 309 Score = 82.1 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + DLF G GG + + E +V+TY N + DI ++ Sbjct: 1 MNLIDLFSGCGGFSKGF----LDQGFNILGAIENFKPAVETYIYNIKAKVWMEDIKRVPP 56 Query: 62 QDI------PDHDVLLAGFPCQPFSQA 82 + D+++ PC+PF++A Sbjct: 57 KAFDKFIGEEKVDLIIGSPPCEPFTKA 83 >gi|213972219|ref|ZP_03400299.1| cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato T1] gi|289626827|ref|ZP_06459781.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|301386398|ref|ZP_07234816.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato Max13] gi|302062510|ref|ZP_07254051.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato K40] gi|213923026|gb|EEB56641.1| cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato T1] gi|330870292|gb|EGH05001.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 382 Score = 82.1 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKI 59 M + F G G R L + +C F+++ +P +Y N+ + L GD+A + Sbjct: 1 MANFYEFFAGGGMARAGL-----GPDWQCMFANDFDPKKAASYATNWGDDHLRVGDVAAL 55 Query: 60 KTQDIPD-HDVLLAGFPCQPFSQAG 83 T ++P D+ A FPCQ S AG Sbjct: 56 TTTELPGVVDLAWASFPCQDLSLAG 80 >gi|301167156|emb|CBW26735.1| modification methylase (cytosine-specific DNA methylase) [Bacteriovorax marinus SJ] Length = 383 Score = 82.1 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDI---- 56 L D+F G GG+ LE ++C + N ++++T+ N + + GDI Sbjct: 6 LNFIDIFAGAGGLSCGLELA----GMKCVLGIDANKHAMETFARNHKHAQTYCGDITKLT 61 Query: 57 --AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +K D V++ G PCQ FS G Sbjct: 62 KKELLKKLDGNHVHVVVGGPPCQGFSTVG 90 >gi|226363491|ref|YP_002781273.1| modification methylase [Rhodococcus opacus B4] gi|226241980|dbj|BAH52328.1| modification methylase [Rhodococcus opacus B4] Length = 381 Score = 81.7 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 7/78 (8%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP- 65 LF GIGG+ L L + EI+P + + F + + D+ K+++ +P Sbjct: 4 LFAGIGGLELGLRE----HGWNTELLCEIDPGAQAVLRTRFTDVPVHSDVTKLRS--LPQ 57 Query: 66 DHDVLLAGFPCQPFSQAG 83 + +++ AGFPCQ SQAG Sbjct: 58 NIELVAAGFPCQDLSQAG 75 >gi|332970702|gb|EGK09683.1| DNA (cytosine-5-)-methyltransferase [Kingella kingae ATCC 23330] Length = 197 Score = 81.7 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%) Query: 14 IRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66 + + F++ E ++++ +PY+VK Y ANF + D+ I ++P+ Sbjct: 1 MDKGILGDFHYLGNHYAKLPFEIAYAADYDPYAVKIYNANFSHQAEIKDVRDIVAGELPE 60 Query: 67 HDVLLAGFPCQPFSQ 81 HD+LL GFPCQ FS Sbjct: 61 HDILLGGFPCQSFSI 75 >gi|319939117|ref|ZP_08013481.1| modification methylase BsuRI [Streptococcus anginosus 1_2_62CV] gi|319812167|gb|EFW08433.1| modification methylase BsuRI [Streptococcus anginosus 1_2_62CV] Length = 434 Score = 81.7 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 28/108 (25%) Query: 2 LKITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINP 37 + + LF G GG+ L E + +++++ Sbjct: 63 INVVSLFSGAGGLDLGTELAGLASVVGLQKALEIFEDKKEFSKKRHKSIFHTIYTNDMFV 122 Query: 38 YSVKTYQANFPNTLIFG--DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + +TY+ NFP +I DI K+ P++++ + GFPC FS+AG Sbjct: 123 EANETYKKNFPPNIIQHQKDIRKV--AHFPNNELTVGGFPCPGFSEAG 168 >gi|34014717|dbj|BAC81824.1| methylase [Acidocella facilis] Length = 443 Score = 81.7 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQD 63 DLF G GG+ L EQ + + E++P ++ NFP T + + + + Sbjct: 6 IDLFAGAGGLSLGFEQA----GFDVVAAVEVDPVHCGVHKFNFPQTAVVPRSVVGLTAAE 61 Query: 64 I--------PDHDVLLAGFPCQPFSQAG 83 I D + G PCQ FS G Sbjct: 62 IRLAAGIGNRPVDCVFGGPPCQGFSMIG 89 >gi|300868191|ref|ZP_07112823.1| Cytosine-specific methyltransferase [Oscillatoria sp. PCC 6506] gi|300333815|emb|CBN58007.1| Cytosine-specific methyltransferase [Oscillatoria sp. PCC 6506] Length = 395 Score = 81.7 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 23/98 (23%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAKIKT 61 LF G G+ L LE+ + EI P +VKT N P+ I DI ++ Sbjct: 14 VSLFTGACGLDLGLEKA----GFQTVSLVEIEPDAVKTISLNRPHLSLCAIPRDIREVSA 69 Query: 62 QDI----------------PDHDVLLAGFPCQPFSQAG 83 Q + + D++ G PCQPFS AG Sbjct: 70 QTLLKEGGKILGIDRPLRPGEVDLVTGGPPCQPFSTAG 107 >gi|224044835|ref|XP_002192893.1| PREDICTED: tRNA aspartic acid methyltransferase 1 [Taeniopygia guttata] Length = 399 Score = 81.7 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 L++ +L+ GIGG+ L ++ H E + ++N + Y+ NFP+T ++ I I Sbjct: 4 LRVLELYSGIGGMHQALRESCRHA--EVVAAVDVNTLANAVYKHNFPSTPLWAKTIEGIT 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 ++ D++L PCQPF++ G Sbjct: 62 LKEFDRLSFDMILLSPPCQPFTRTG 86 >gi|163738696|ref|ZP_02146110.1| DNA-cytosine methyltransferase [Phaeobacter gallaeciensis BS107] gi|163741592|ref|ZP_02148983.1| DNA modification methylase M.NGOI [Phaeobacter gallaeciensis 2.10] gi|161385326|gb|EDQ09704.1| DNA modification methylase M.NGOI [Phaeobacter gallaeciensis 2.10] gi|161388024|gb|EDQ12379.1| DNA-cytosine methyltransferase [Phaeobacter gallaeciensis BS107] Length = 324 Score = 81.7 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 7/86 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 ML +L G GG L LE+ + EI+ + T + N P ++ D+ Sbjct: 1 MLTSVELCAGAGGQALGLEKA----GFDHTALVEIDKHCCATLRHNRPQWNVLEEDVRAF 56 Query: 60 KTQDIPDH--DVLLAGFPCQPFSQAG 83 K + H D+L G PC PFS AG Sbjct: 57 KEEADAYHGIDLLAGGLPCPPFSVAG 82 >gi|71909137|ref|YP_286724.1| C-5 cytosine-specific DNA methylase [Dechloromonas aromatica RCB] gi|71848758|gb|AAZ48254.1| C-5 cytosine-specific DNA methylase [Dechloromonas aromatica RCB] Length = 571 Score = 81.7 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 11/84 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---DIAKI 59 + DL+ GIGG L LE +E S E + +T N N DI ++ Sbjct: 36 RAIDLYSGIGGWSLGLEMA----GIEVVASYEWWDKANRT---NHKNNQHLATEIDIRQL 88 Query: 60 KTQDIPD-HDVLLAGFPCQPFSQA 82 + +D+P D+++ PC FS A Sbjct: 89 RLEDLPKNIDIVVGSPPCTQFSFA 112 >gi|254488706|ref|ZP_05101911.1| C-5 cytosine-specific DNA methylase [Roseobacter sp. GAI101] gi|214045575|gb|EEB86213.1| C-5 cytosine-specific DNA methylase [Roseobacter sp. GAI101] Length = 384 Score = 81.7 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT 61 K + FCG G +R L+ +C +++I+P Y+ N+ + GDIA + Sbjct: 10 KYAEFFCGGGMVRAALQ-----DRWDCVLANDIDPMKCAVYERNWGQEALHQGDIATLPD 64 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 + D+ A PCQ FS AG Sbjct: 65 AKLRQPIDLYWASSPCQDFSLAG 87 >gi|319787787|ref|YP_004147262.1| DNA-cytosine methyltransferase [Pseudoxanthomonas suwonensis 11-1] gi|317466299|gb|ADV28031.1| DNA-cytosine methyltransferase [Pseudoxanthomonas suwonensis 11-1] Length = 425 Score = 81.7 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 29/107 (27%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 LK+ DLF G GG+ L LEQ F +E+N + TY N + Sbjct: 6 LKVVDLFAGCGGLSLGLEQA----GFVPVFVNELNDDARATYIQNRVERHEWLAEPGFHA 61 Query: 54 GDIAK--IKTQDIP---------------DHDVLLAGFPCQPFSQAG 83 D+ + + +P + D+L+ G PCQ FS G Sbjct: 62 SDVKGMVLDKKYLPALEKRLKDTFAIEHGELDLLVGGPPCQGFSGIG 108 >gi|160873497|ref|YP_001552813.1| DNA-cytosine methyltransferase [Shewanella baltica OS195] gi|160859019|gb|ABX47553.1| DNA-cytosine methyltransferase [Shewanella baltica OS195] gi|315265725|gb|ADT92578.1| DNA-cytosine methyltransferase [Shewanella baltica OS678] Length = 385 Score = 81.7 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 18/93 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------PNTLIFGD 55 +K DLF G GG+ L Q ++ + E++ + TY+AN P LI GD Sbjct: 1 MKAIDLFSGAGGLSLAAHQC----GIDVIAAIELDTAASITYRANLIEQLKAPTKLINGD 56 Query: 56 IAKIKTQDI--------PDHDVLLAGFPCQPFS 80 I ++ + + ++LL G PCQ FS Sbjct: 57 INEVDLPALMKELKLKSGELELLLGGPPCQGFS 89 >gi|157953886|ref|YP_001498777.1| hypothetical protein AR158_C696R [Paramecium bursaria Chlorella virus AR158] gi|156068534|gb|ABU44241.1| hypothetical protein AR158_C696R [Paramecium bursaria Chlorella virus AR158] Length = 362 Score = 81.7 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK +LF GI GI L + F VE EIN + + FP+ +F D+ K Sbjct: 3 LKALELFAGIAGITHGL-RGF----VEPMAFVEINKDAQEFLSTKFPDKPVFDDVTKFSK 57 Query: 62 QDIPD-HDVLLAGFPCQPFSQAG 83 +D + D++ GFPC FS AG Sbjct: 58 RDFDEPIDMITGGFPCTGFSIAG 80 >gi|227875051|ref|ZP_03993196.1| possible DNA-cytosine methyltransferase [Mobiluncus mulieris ATCC 35243] gi|304390295|ref|ZP_07372248.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|306817338|ref|ZP_07451083.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC 35239] gi|227844329|gb|EEJ54493.1| possible DNA-cytosine methyltransferase [Mobiluncus mulieris ATCC 35243] gi|304326051|gb|EFL93296.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304649779|gb|EFM47059.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC 35239] Length = 468 Score = 81.7 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L + ++SEI P+ + P GD+ + Sbjct: 4 LTLGSLFDGSGGFPL----AGIQAGIRPVWASEIEPFPILVTTRRLPQLTHVGDVTTVNG 59 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D+ DV+ G PCQ S AG Sbjct: 60 ADVDAVDVITFGSPCQDLSVAG 81 >gi|67514595|ref|NP_001020002.1| tRNA (cytosine-5-)-methyltransferase [Gallus gallus] gi|66766328|dbj|BAD99025.1| DNA methyltransferase 2 [Gallus gallus] Length = 398 Score = 81.7 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 L++ +L+ GIGG+ L+++ E + ++N + + Y+ NFP+T ++ I I Sbjct: 4 LRVLELYSGIGGMHQALKESCICA--EVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGIT 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 ++ D++L PCQPF++ G Sbjct: 62 LKEFDRLSFDMILMSPPCQPFTRIG 86 >gi|326921696|ref|XP_003207092.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Meleagris gallopavo] Length = 398 Score = 81.3 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 L++ +L+ GIGG+ L+++ E + ++N + + Y+ NFP+T ++ I I Sbjct: 4 LRVLELYSGIGGMHQALKESCVCA--EVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGIT 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 ++ D++L PCQPF++ G Sbjct: 62 LKEFDRLSFDMILMSPPCQPFTRIG 86 >gi|257421714|ref|ZP_05598704.1| predicted protein [Enterococcus faecalis X98] gi|257163538|gb|EEU93498.1| predicted protein [Enterococcus faecalis X98] Length = 286 Score = 81.3 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDH 67 F G GG+ L + Q + S EI+ T + NF + + DI+KI D D Sbjct: 9 FSGAGGMDLGMLQA----GINVVESFEIDKKCCATLRKNFNHKVNECDISKITVLDQQDA 64 Query: 68 DVLLAGFPCQPFS 80 DV + FPC +S Sbjct: 65 DVYIGTFPCTKYS 77 >gi|319639604|ref|ZP_07994351.1| cytosine-specific methyltransferase [Neisseria mucosa C102] gi|317399175|gb|EFV79849.1| cytosine-specific methyltransferase [Neisseria mucosa C102] Length = 348 Score = 81.3 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 11/88 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61 + DLFCG GG+ L Q + + ++ TY A T I D+ I Sbjct: 9 TVLDLFCGCGGLSLGFIQA----GFDVKLGIDYWQDAITTYTATHKGTQGIVADLFNITP 64 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + I DV++ G PCQ FS AG Sbjct: 65 EQISQQTQIKQLDVIIGGPPCQGFSIAG 92 >gi|229490017|ref|ZP_04383870.1| modification methylase DdeI [Rhodococcus erythropolis SK121] gi|229323118|gb|EEN88886.1| modification methylase DdeI [Rhodococcus erythropolis SK121] Length = 431 Score = 81.3 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 31/83 (37%), Gaps = 11/83 (13%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDIPD 66 F G GG+ E+ P + T+ NFP G DI I + D Sbjct: 97 FSGCGGMAEGFRMA----GFSVEGYIEVVPEARATFDRNFPGARCLGEDIRAIDEARVKD 152 Query: 67 ------HDVLLAGFPCQPFSQAG 83 DVL G PCQ FS AG Sbjct: 153 LLAQVDIDVLAGGPPCQGFSLAG 175 >gi|226307434|ref|YP_002767394.1| modification methylase [Rhodococcus erythropolis PR4] gi|226186551|dbj|BAH34655.1| putative modification methylase [Rhodococcus erythropolis PR4] Length = 444 Score = 81.3 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 31/83 (37%), Gaps = 11/83 (13%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDIPD 66 F G GG+ E+ P + T+ NFP G DI I + D Sbjct: 110 FSGCGGMAEGFRMA----GFSVEGYIEVVPEARATFDRNFPGARCLGEDIRAIDEARVKD 165 Query: 67 ------HDVLLAGFPCQPFSQAG 83 DVL G PCQ FS AG Sbjct: 166 LLAQVDIDVLAGGPPCQGFSLAG 188 >gi|188575624|ref|YP_001912553.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520076|gb|ACD58021.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv. oryzae PXO99A] Length = 395 Score = 81.3 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 13/83 (15%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDIP- 65 F G GG+ L + +++EI+P +TY AN P T + DI K+ + I Sbjct: 2 FAGAGGLSEGLREA----GFTSLYANEISPRYAQTYAANHPATQVDSRDIRKVDARKIRN 57 Query: 66 -------DHDVLLAGFPCQPFSQ 81 + D++ G PCQ FS Sbjct: 58 LLGLKRGELDLIAGGPPCQGFSI 80 >gi|159029640|emb|CAO87718.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 306 Score = 81.3 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 8/86 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+ DLF G GG+ L ++ + + ++ Y NF + + D+++ Sbjct: 1 MIT-IDLFAGCGGLSLGFQKA----GFTIVAAFDNWIPAIDVYSNNFSHPIFNVDLSRES 55 Query: 61 TQDIP---DHDVLLAGFPCQPFSQAG 83 Q+I + ++++ PCQ FS AG Sbjct: 56 NQEILAQYNPEIIVGSPPCQDFSSAG 81 >gi|182437151|ref|YP_001824870.1| putative SacI methylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465667|dbj|BAG20187.1| putative SacI methylase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 363 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 16/91 (17%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAKIKT 61 LF G GG+ L +E E + E N +V T + NF + +I DI ++ T Sbjct: 18 ISLFSGAGGLDLGVEAA----GYEVRAAVEHNADAVATMEKNFSHLQSEVIQRDILEVPT 73 Query: 62 QDI---------PDHDVLLAGFPCQPFSQAG 83 +++ D+L+ G PC PFS++G Sbjct: 74 KELLGAAGLKGRERPDLLVGGPPCTPFSKSG 104 >gi|90420969|ref|ZP_01228873.1| possible cytosine-specific DNA methylase [Aurantimonas manganoxydans SI85-9A1] gi|90334747|gb|EAS48523.1| possible cytosine-specific DNA methylase [Aurantimonas manganoxydans SI85-9A1] Length = 541 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DL+ GIGG L L VE S E +V T+ N L D+ ++ Sbjct: 1 MRAIDLYAGIGGWSLGLRLA----GVEVVASYEWWQAAVDTHNGNHGGDLKPVDVRQLHL 56 Query: 62 QDI-PDHDVLLAGFPCQPFS 80 D+ P+ D+++ PC FS Sbjct: 57 HDLPPNIDLVVGSPPCTEFS 76 >gi|83859530|ref|ZP_00953050.1| DNA-cytosine methyltransferase [Oceanicaulis alexandrii HTCC2633] gi|83851889|gb|EAP89743.1| DNA-cytosine methyltransferase [Oceanicaulis alexandrii HTCC2633] Length = 394 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 7/80 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDI 64 + FCG G RL L + C F+++I+ Y+ NF + GD+ +K D+ Sbjct: 15 EFFCGGGMARLGL-----GAHWRCHFANDIDADKANAYRDNFGDDHFHQGDVCALKPSDL 69 Query: 65 P-DHDVLLAGFPCQPFSQAG 83 P + D+ A FPCQ S AG Sbjct: 70 PGEADLAWASFPCQDLSLAG 89 >gi|303239111|ref|ZP_07325641.1| C-5 cytosine-specific DNA methylase [Acetivibrio cellulolyticus CD2] gi|302593449|gb|EFL63167.1| C-5 cytosine-specific DNA methylase [Acetivibrio cellulolyticus CD2] Length = 632 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L + ++SEI P+ ++ P +GDI KI Sbjct: 5 LTLGSLFDGSGGFPLGA----LLNGIVPIWASEIEPFPIRVTTKRLPFVKHYGDIRKING 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +I D++ G PC S AG Sbjct: 61 AEIEPVDIITFGSPCTDMSVAG 82 >gi|299531463|ref|ZP_07044871.1| DNA-cytosine methyltransferase [Comamonas testosteroni S44] gi|298720626|gb|EFI61575.1| DNA-cytosine methyltransferase [Comamonas testosteroni S44] Length = 435 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 9/84 (10%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIAKI 59 LF G GG+ L E+ S EI +T ++N P ++ GD+ Sbjct: 121 LSLFAGGGGLDLGFERA----GFSHTASFEILDVCGETLRSNRPEWTVYSGAEAGDVRTA 176 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + D++ G PCQPFS AG Sbjct: 177 PFSNFRGVDIVHGGPPCQPFSIAG 200 >gi|218441855|ref|YP_002380184.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] gi|218174583|gb|ACK73316.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424] Length = 342 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 9/81 (11%) Query: 4 ITDLFCGIGGIRLDLE-QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + DLF G GG+ L E Q F ++N + ++Y N + I Sbjct: 33 VVDLFAGCGGLSLGFEAQGFLTIGF------DMNHDACQSYCHNLEGNCLE--IILTPET 84 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +PD V++ PCQPFS +G Sbjct: 85 LLPDCRVIIGSPPCQPFSVSG 105 >gi|462647|sp|P34905|MTB1_BREBE RecName: Full=Modification methylase BbvI; Short=M.BbvI; AltName: Full=Cytosine-specific methyltransferase BbvI Length = 374 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 17/99 (17%) Query: 2 LKI--TDLFCGIGGIRLDLEQT-------FNHRNVECFFSSEINPYSVKTYQANF----P 48 +K +LFCG GG+ L ++ E ++++I+ ++ +T++ N P Sbjct: 1 MKFRKGELFCGPGGLALGAKEAKYMHPETGEVFEFEHAWANDIDEWACETFRTNICPDRP 60 Query: 49 NTLIFGDIAKIKT----QDIPDHDVLLAGFPCQPFSQAG 83 ++++ GD+ ++ + + D GFPC +S G Sbjct: 61 DSVVCGDVRELDIKSLGEKFGEIDAFTFGFPCNDYSIVG 99 >gi|157961098|ref|YP_001501132.1| DNA-cytosine methyltransferase [Shewanella pealeana ATCC 700345] gi|157846098|gb|ABV86597.1| DNA-cytosine methyltransferase [Shewanella pealeana ATCC 700345] Length = 406 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 14/90 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKIKT 61 + LF G GG+ + L + S EI+ + KT + N P+ + GDI K+ Sbjct: 1 MISLFSGAGGLDIGLCEA----GFTNRLSVEIDEDAQKTLKLNQPSLKLATPGDIHKLTP 56 Query: 62 QDI--------PDHDVLLAGFPCQPFSQAG 83 ++ + +L G PCQPFS++G Sbjct: 57 SELLRQSGLQPKELTLLAGGPPCQPFSKSG 86 >gi|313668596|ref|YP_004048880.1| DNA cytosine methyltransferase [Neisseria lactamica ST-640] gi|313006058|emb|CBN87519.1| DNA cytosine methyltransferase [Neisseria lactamica 020-06] Length = 393 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +K ++F G GG+ LE + E+N + + ++NF L++ GD+A Sbjct: 1 MKSLEIFSGAGGLAKGLELA----GFQHASFIELNKDACNSLRSNFNPKLVYQGDVADFD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +V+ G PCQPFS G Sbjct: 57 LSSQEGIEVIAGGPPCQPFSLGG 79 >gi|59801568|ref|YP_208280.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae FA 1090] gi|194097887|ref|YP_002000932.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae NCCP11945] gi|239998362|ref|ZP_04718286.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae 35/02] gi|240113683|ref|ZP_04728173.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae MS11] gi|240116425|ref|ZP_04730487.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae PID18] gi|240117164|ref|ZP_04731226.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae PID1] gi|240125114|ref|ZP_04738000.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae SK-92-679] gi|254494438|ref|ZP_05107609.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae 1291] gi|260441646|ref|ZP_05795462.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae DGI2] gi|268594223|ref|ZP_06128390.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae 35/02] gi|268599750|ref|ZP_06133917.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae MS11] gi|268602094|ref|ZP_06136261.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae PID18] gi|268602852|ref|ZP_06137019.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae PID1] gi|268683710|ref|ZP_06150572.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae SK-92-679] gi|291045024|ref|ZP_06570732.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae DGI2] gi|10444408|gb|AAG17898.1|AF297971_2 DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae] gi|59718463|gb|AAW89868.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae FA 1090] gi|193933177|gb|ACF29001.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae NCCP11945] gi|226513478|gb|EEH62823.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae 1291] gi|268547612|gb|EEZ43030.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae 35/02] gi|268583881|gb|EEZ48557.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae MS11] gi|268586225|gb|EEZ50901.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae PID18] gi|268586983|gb|EEZ51659.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae PID1] gi|268623994|gb|EEZ56394.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae SK-92-679] gi|291011027|gb|EFE03024.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae DGI2] gi|317163651|gb|ADV07192.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae TCDC-NG08107] Length = 377 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +K ++F G GG+ LE + E+N + + ++NF L++ GD+A Sbjct: 1 MKSLEIFSGAGGLAKGLELA----GFQHASFIELNKDACNSLRSNFNPKLVYQGDVADFD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +V+ G PCQPFS G Sbjct: 57 LSSQEGIEVIAGGPPCQPFSLGG 79 >gi|119503900|ref|ZP_01625982.1| putative cytosine-specific methyltransferase [marine gamma proteobacterium HTCC2080] gi|119460408|gb|EAW41501.1| putative cytosine-specific methyltransferase [marine gamma proteobacterium HTCC2080] Length = 463 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 41/112 (36%), Gaps = 34/112 (30%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-----------NT 50 L + DLF G GG+ L +EQ F +E+N + +Y N + Sbjct: 22 LTMIDLFAGCGGLSLGMEQA----GFTPIFVNELNDDARASYLLNRDFDLKGKPFNQCHE 77 Query: 51 LIFGDIAKIKTQD-------------IPDH------DVLLAGFPCQPFSQAG 83 L DI ++ I DH D++ G PCQ +S G Sbjct: 78 LHSADIYELTQSRLKQLKKHLLDLGLITDHDSHTSLDLICGGPPCQGYSGIG 129 >gi|283456339|ref|YP_003360903.1| cytosine methyl transferase [Bifidobacterium dentium Bd1] gi|283102973|gb|ADB10079.1| dcm Cytosine methyl transferase [Bifidobacterium dentium Bd1] Length = 509 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 F G GG+ L +EQ + C E + + N+P+ + GDI ++ + Sbjct: 136 LSFFTGAGGLDLGMEQAGISARLLC----ENMREARMSIGVNWPDKALVGDITELDAVTV 191 Query: 65 P---------DHDVLLAGFPCQPFSQAG 83 + DV+ G PCQ FS AG Sbjct: 192 RRMAGLDEDTEIDVMFGGPPCQAFSTAG 219 >gi|172037464|ref|YP_001803965.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] gi|171698918|gb|ACB51899.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142] Length = 430 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 38/121 (31%) Query: 1 MLKITDLFCGIGGIRLDLEQTF--------------------------NHRNVECFFSSE 34 M ++ LF G GG+ L E F N N + F+++ Sbjct: 1 MKRLLSLFSGCGGMDLGFEGNFWIHEDCINETIHPNWIVKKKERWVLLNKTNFDIVFAND 60 Query: 35 INPYSVKTYQANFPNTL---IFG-----DIAKIKTQ---DIP-DHDVLLAGFPCQPFSQA 82 I Y+ + + F + IF D+ K+ D P + D++ GFPCQ FS + Sbjct: 61 IEKYAYNAWMSYFGKKILGKIFHLNSLVDLIKLSETGNFDFPNNIDIITGGFPCQDFSVS 120 Query: 83 G 83 G Sbjct: 121 G 121 >gi|171742574|ref|ZP_02918381.1| hypothetical protein BIFDEN_01687 [Bifidobacterium dentium ATCC 27678] gi|171278188|gb|EDT45849.1| hypothetical protein BIFDEN_01687 [Bifidobacterium dentium ATCC 27678] Length = 481 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 F G GG+ L +EQ + C E + + N+P+ + GDI ++ + Sbjct: 108 LSFFTGAGGLDLGMEQAGISARLLC----ENMREARMSIGVNWPDKALVGDITELDAVTV 163 Query: 65 P---------DHDVLLAGFPCQPFSQAG 83 + DV+ G PCQ FS AG Sbjct: 164 RRMAGLDEDTEIDVMFGGPPCQAFSTAG 191 >gi|241667884|ref|ZP_04755462.1| C-5 cytosine-specific DNA methylase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 457 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 43/114 (37%), Gaps = 37/114 (32%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57 +K DLF G GG+ L + F+ E +P + +T+ NF I +I Sbjct: 1 MKYIDLFAGCGGLSLGF----KSEGFDLLFAVEKSPMAAETFYHNFIEK-INDNIEWSKY 55 Query: 58 -------KIKTQ---------------------DIPDHDVLLAGFPCQPFSQAG 83 ++ ++ I + D+++ G PCQ FS AG Sbjct: 56 LNKSIEEQLDSKLFVGETLTLLEKPQLLKKLKTKIGELDLIVGGPPCQGFSLAG 109 >gi|11138959|gb|AAG31558.1| SgrAIM methylase [Streptomyces griseus] Length = 429 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 20/97 (20%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI-- 59 K LF G GG + + E++ ++ TY+ NFP +F GD+ Sbjct: 25 KAVSLFSGCGGFCEGVRLA----GFSVEAAVELDRFAAVTYRHNFPEVPLFEGDVHDFLN 80 Query: 60 --------KTQDIPDH-----DVLLAGFPCQPFSQAG 83 + + D D+L G PCQ +SQ G Sbjct: 81 DSSETWRGEAERFSDVKAGNIDLLFGGPPCQGYSQIG 117 >gi|312137784|ref|YP_004005120.1| DNA (cytosine-5-)-methyltransferase [Rhodococcus equi 103S] gi|311887123|emb|CBH46432.1| DNA (cytosine-5-)-methyltransferase [Rhodococcus equi 103S] Length = 387 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 7/82 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + LF GIGG+ L L E EI+P + + + F + + GD+ ++++ Sbjct: 6 NMVGLFAGIGGVELGL----RSHGWETELLCEIDPGAQQVLRTRFADVELHGDVTRLRS- 60 Query: 63 DIPDH-DVLLAGFPCQPFSQAG 83 +P +++ AGFPCQ SQAG Sbjct: 61 -LPQRTELVAAGFPCQDLSQAG 81 >gi|311977248|gb|ADQ20503.1| M.BbvI [Brevibacillus brevis] Length = 367 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 17/99 (17%) Query: 2 LKI--TDLFCGIGGIRLDLEQT-------FNHRNVECFFSSEINPYSVKTYQANF----P 48 +K +LFCG GG+ L ++ E ++++I+ ++ +T++ N P Sbjct: 1 MKFRKGELFCGPGGLALGAKEAKYMHPETGEVFEFEHAWANDIDEWACETFRTNICPDRP 60 Query: 49 NTLIFGDIAKIKT----QDIPDHDVLLAGFPCQPFSQAG 83 ++++ GD+ ++ + + D GFPC +S G Sbjct: 61 DSVVCGDVRELDIKSLGEKFGEIDAFTFGFPCNDYSIVG 99 >gi|144575557|gb|AAZ53977.2| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae 7448] Length = 339 Score = 81.3 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 38/95 (40%), Gaps = 17/95 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------NTLIFGD 55 DLF G GG+ L S +I +V+TY NF GD Sbjct: 15 YNFIDLFSGAGGLSCGLVMA----GFLPLASLKIMKQAVETYAYNFKKRSKNKELFKLGD 70 Query: 56 IAKIKTQ-DIPDH------DVLLAGFPCQPFSQAG 83 I K + + DH D++ GFPCQ FS AG Sbjct: 71 IRDSKIKSEFYDHFKDQELDLIAGGFPCQGFSMAG 105 >gi|266622011|ref|ZP_06114946.1| site-specific DNA-methyltransferase [Clostridium hathewayi DSM 13479] gi|288866294|gb|EFC98592.1| site-specific DNA-methyltransferase [Clostridium hathewayi DSM 13479] Length = 298 Score = 81.0 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGGI L E E Y + ++P F DI + Sbjct: 4 LTHFSLFTGIGGIDLAAEAA----GFTTVCQCEWADYPTAVLEKHWPLVPRFRDITTVTK 59 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + + +L GFPCQPFS G Sbjct: 60 EAFIEKTGRKEITLLSGGFPCQPFSSVG 87 >gi|167571686|ref|ZP_02364560.1| C-5 cytosine-specific DNA methylase [Burkholderia oklahomensis C6786] Length = 382 Score = 81.0 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKI 59 M + F G G R L + EC F+++ + +Y AN+ + L D+A + Sbjct: 1 MYSFYEFFAGGGMARAGL-----GSDWECQFANDFDSKKAISYAANWGDDHLNSDDVAAL 55 Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83 T D+P H D+ A FPCQ S AG Sbjct: 56 STADLPGHVDLAWASFPCQDLSLAG 80 >gi|332367371|gb|EGJ45104.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK1059] Length = 329 Score = 81.0 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 22/100 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---------FPNTLI 52 + DLF G GG+ L L +E F+ E N + KT + N +P+ L Sbjct: 15 MNYIDLFAGSGGLSLGLHNA----GLEGLFAIERNKDAFKTLKFNLIDKRKHFSWPDWLE 70 Query: 53 FG--DIAKIKTQDIP-------DHDVLLAGFPCQPFSQAG 83 DI ++ + D+++ G PCQ FS AG Sbjct: 71 MKNWDINELLEEHSENLASLSGKVDLVVGGPPCQGFSMAG 110 >gi|145346921|ref|XP_001417930.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578158|gb|ABO96223.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 820 Score = 81.0 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 4/79 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF G+GG+ L L+Q + E + + + A FP + D+A++ Sbjct: 4 LRVASLFSGVGGLDLGLQQAGH----RIELMVERDAHCKQVLSARFPGVALLNDVAEVLP 59 Query: 62 QDIPDHDVLLAGFPCQPFS 80 + + D ++AGFPC S Sbjct: 60 FMLENIDCVVAGFPCNDCS 78 >gi|309380076|emb|CBX21487.1| putative DNA cytosine methyltransferase [Neisseria lactamica Y92-1009] Length = 377 Score = 81.0 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +K ++F G GG+ LE + E+N + + ++NF L++ GD+A Sbjct: 1 MKSLEIFSGAGGLAKGLELA----GFQHASFIELNKDACNSLRSNFNPKLVYQGDVADFD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +V+ G PCQPFS G Sbjct: 57 LSSQEGIEVIAGGPPCQPFSLGG 79 >gi|283956744|ref|ZP_06374220.1| hypothetical protein C1336_000290019 [Campylobacter jejuni subsp. jejuni 1336] gi|283791719|gb|EFC30512.1| hypothetical protein C1336_000290019 [Campylobacter jejuni subsp. jejuni 1336] Length = 330 Score = 81.0 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 10/89 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 DLF G GG L ++ S + NP +Y+ NF I DI Sbjct: 4 YNTLDLFSGAGGFSLGFLKSGA---FNILLSIDNNPKLSISYEKNFDFIKHINRDILSFS 60 Query: 61 TQDIPD------HDVLLAGFPCQPFSQAG 83 +DI +V++ G PCQ FS AG Sbjct: 61 DKDIQKLQQKYNFEVIIGGPPCQGFSLAG 89 >gi|256810753|ref|YP_003128122.1| DNA-cytosine methyltransferase [Methanocaldococcus fervens AG86] gi|256793953|gb|ACV24622.1| DNA-cytosine methyltransferase [Methanocaldococcus fervens AG86] Length = 310 Score = 81.0 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + DLF G GG + E VKTY N + DI +I Sbjct: 1 MNVIDLFSGCGGFSKGF----LDEKFRILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPP 56 Query: 62 QDI------PDHDVLLAGFPCQPFSQA 82 + DV++ PC+PF++A Sbjct: 57 KAFDEFIKNEKVDVIIGSPPCEPFTKA 83 >gi|213403582|ref|XP_002172563.1| tRNA (cytosine-5-)-methyltransferase [Schizosaccharomyces japonicus yFS275] gi|212000610|gb|EEB06270.1| tRNA (cytosine-5-)-methyltransferase [Schizosaccharomyces japonicus yFS275] Length = 326 Score = 81.0 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ +L+ GIGG+ L++ + + + + +INP + + Y NF DI+ + Sbjct: 8 LRVLELYSGIGGMHFALQKL--NIDFKVVLAVDINPLANQIYNENFGKIAKHYDISTLTK 65 Query: 62 QDIP--DHDVLLAGFPCQPFSQAG 83 + + D+ CQP+++ G Sbjct: 66 EQLDALRCDLWTLSPSCQPYTRLG 89 >gi|146309050|ref|YP_001189515.1| DNA-cytosine methyltransferase [Pseudomonas mendocina ymp] gi|145577251|gb|ABP86783.1| DNA-cytosine methyltransferase [Pseudomonas mendocina ymp] Length = 365 Score = 81.0 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 10/89 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59 ML + DLF G GG+ L +Q + +I+P ++ NFP+ D+ + Sbjct: 1 MLTLLDLFSGCGGLTLGAKQA----GFTTELAVDIDPILSSSFGLNFPSVPFLNADVTTL 56 Query: 60 KTQDIP-----DHDVLLAGFPCQPFSQAG 83 + + D ++ G PCQ FS G Sbjct: 57 TSDRLKALLPSGVDGVIGGPPCQAFSGMG 85 >gi|307704025|ref|ZP_07640957.1| cytosine methyl transferase [Streptococcus mitis SK597] gi|307622416|gb|EFO01421.1| cytosine methyl transferase [Streptococcus mitis SK597] Length = 351 Score = 81.0 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 13/88 (14%) Query: 2 LKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +KI DLFCGIGG+ ++Q + +I+ S Y+ N IF D+ +I Sbjct: 1 MKINAVDLFCGIGGLTYGIQQA----GINVVAGYDIDEKSKFAYEYNNGAKFIFKDVREI 56 Query: 60 KTQDI-----PDHD--VLLAGFPCQPFS 80 + +I PD D VL+ PCQPFS Sbjct: 57 EDNEILGLYPPDTDIKVLIGCAPCQPFS 84 >gi|296453364|ref|YP_003660507.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. longum JDM301] gi|296182795|gb|ADG99676.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. longum JDM301] Length = 392 Score = 81.0 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKIK 60 + F GIG RL LE+ + +S++I+ + Y+ NF +TL+ GD++++ Sbjct: 18 LEFFAGIGLARLGLEEA----GFQVEWSNDIDAAKCEMYRNNFTDTPGHTLVEGDMSELS 73 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 D+P D + PC S AG Sbjct: 74 GDDLPHDASIAWGSSPCTDLSLAG 97 >gi|225691140|gb|ACO06242.1| 5'-methylcytosine methyltransferase M.BbrI [Bifidobacterium breve UCC2003] Length = 392 Score = 81.0 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKIK 60 + F GIG RL LE+ + +S++I+ + Y+ NF +TL+ GD++++ Sbjct: 18 LEFFAGIGLARLGLEEA----GFQVEWSNDIDAAKCEMYRNNFTDTPGHTLVEGDMSELS 73 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 D+P D + PC S AG Sbjct: 74 GDDLPHDASIAWGSSPCTDLSLAG 97 >gi|190892898|ref|YP_001979440.1| DNA-cytosine methyltransferase [Rhizobium etli CIAT 652] gi|190698177|gb|ACE92262.1| putative DNA-cytosine methyltransferase protein [Rhizobium etli CIAT 652] Length = 638 Score = 81.0 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 7/84 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 + ++ G GG+ + LE+ E E + Y+ T + N P+ T+I D+ K+ Sbjct: 281 TVVEICAGAGGMSIGLERA----GFEHIALIEYDKYAAATLRRNRPDWTVIKEDLRKMDF 336 Query: 62 QDIP--DHDVLLAGFPCQPFSQAG 83 + + D++ G PCQP+S G Sbjct: 337 KLYRQLEIDLVSGGPPCQPYSSDG 360 >gi|220924842|ref|YP_002500144.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060] gi|219949449|gb|ACL59841.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060] Length = 361 Score = 81.0 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 12/90 (13%) Query: 2 LK--ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK 58 +K + DLFCG GG+ L + S +I+ +Y+ N P L D+A Sbjct: 1 MKPVVVDLFCGCGGLSLGARNA----GFKIGLSVDIDAVLTSSYKENHPGAHLRLMDVAA 56 Query: 59 IKTQDIP-----DHDVLLAGFPCQPFSQAG 83 + D+ D ++ G PCQ FS+ G Sbjct: 57 LTGSDVRTVVGGRVDGIIGGPPCQGFSEIG 86 >gi|257877765|ref|ZP_05657418.1| cytosine specific DNA methyltransferase [Enterococcus casseliflavus EC20] gi|257811931|gb|EEV40751.1| cytosine specific DNA methyltransferase [Enterococcus casseliflavus EC20] Length = 380 Score = 80.6 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 17/91 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----------FPNTLI 52 + DLF G GG+ Q + + + +++TY N F Sbjct: 7 VIDLFSGAGGLSQGFVQA----GFDVLAGIDFDDAALRTYGHNIKGAKALKEDLFDEEKS 62 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI K + DV++AG PCQ FS G Sbjct: 63 IRDIEKNLANK--NIDVIIAGPPCQGFSLTG 91 >gi|322418052|ref|YP_004197275.1| DNA-cytosine methyltransferase [Geobacter sp. M18] gi|320124439|gb|ADW11999.1| DNA-cytosine methyltransferase [Geobacter sp. M18] Length = 385 Score = 80.6 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA----------NFPNTL 51 ++ +LF G GG+ + L H + E N + +T ++P Sbjct: 1 MRSVELFSGCGGLAMGLSLAGFHHELMV----EWNTNACETLAHNKKKKVNHVKSWP--F 54 Query: 52 IFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 GD+ +I DI D++ G PCQPFS G Sbjct: 55 KKGDVREINWTDIRRPIDLVAGGPPCQPFSIGG 87 >gi|22256926|sp|O33481|MTP1_PSYTA RecName: Full=Modification methylase PspPI; Short=M.PspPI; AltName: Full=Cytosine-specific methyltransferase PspPI gi|2558610|emb|CAA68841.1| type II DNA m5C-methyltransferase [Psychrobacter sp.] Length = 416 Score = 80.6 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Query: 23 NHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFS 80 + +E + Y+ T +AN PN +I DI + + D+L GFPCQPFS Sbjct: 94 EQAGFKSVLLNEKDKYACATLRANRPNWNVIEDDIENVDFTHLNGKVDLLTGGFPCQPFS 153 Query: 81 QAG 83 AG Sbjct: 154 YAG 156 >gi|325955715|ref|YP_004293189.1| modification methylase BsuRI [Lactobacillus acidophilus 30SC] gi|325334695|gb|ADZ08248.1| modification methylase BsuRI [Lactobacillus acidophilus 30SC] Length = 406 Score = 80.6 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 26/106 (24%) Query: 2 LKITDLFCGIGGIRLDLE--QTFNHRNVE--------------------CFFSSEINPYS 39 + + LF G GG+ L +E V+ +S+++ + Sbjct: 58 INVLSLFSGAGGLDLGVEIAAASAKHGVDKTYTAFQNRRELSKLLDSTNVIYSNDLFASA 117 Query: 40 VKTYQANFPNTLIFG--DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 TY+ NF + D+ K+ + P D++L GFPC FS AG Sbjct: 118 NATYKDNFSGNYVKDTRDVRKVIS--FPKADLVLGGFPCPGFSVAG 161 >gi|209525305|ref|ZP_03273847.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] gi|209494320|gb|EDZ94633.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328] Length = 342 Score = 80.6 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 16/85 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----AKI 59 + DLF G GG L + E E+ + TY N DI Sbjct: 27 VLDLFAGCGGFSLGFKAA----GFETIGY-EMLADAAATYTRN------LQDICYCQTLE 75 Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83 QD+ +H DV++ G PCQPFS G Sbjct: 76 IGQDLCNHPDVIIGGPPCQPFSVGG 100 >gi|167042310|gb|ABZ07039.1| putative C-5 cytosine-specific DNA methylase [uncultured marine crenarchaeote HF4000_ANIW97J3] Length = 380 Score = 80.6 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 13/91 (14%) Query: 4 ITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDI----- 56 + DLF G GG+ + +++ + ++ TY+ N P + GDI Sbjct: 7 VLDLFSGPGGLSEGFNTAKIGNHTFRSVVANDNDVHASVTYRKNHPGVEFVLGDISASEI 66 Query: 57 -----AKIKTQD-IPDHDVLLAGFPCQPFSQ 81 IK + + DV++ G PC+ FS Sbjct: 67 KRKIVRAIKAETGMNTVDVIIGGPPCKGFSL 97 >gi|166368724|ref|YP_001660997.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] gi|166091097|dbj|BAG05805.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843] Length = 189 Score = 80.6 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 8/86 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+ DLF G GG+ L ++ + + ++ Y+ NF + + D+++ Sbjct: 1 MIT-IDLFAGCGGLSLGFQKA----GFTIVAAFDNWIPAIDVYRNNFSHPIFNVDLSRES 55 Query: 61 TQDI---PDHDVLLAGFPCQPFSQAG 83 +Q+I + ++++ PCQ FS AG Sbjct: 56 SQEIFAQYNPEIIVGSPPCQDFSSAG 81 >gi|307825806|ref|ZP_07656022.1| DNA-cytosine methyltransferase [Methylobacter tundripaludum SV96] gi|307733114|gb|EFO03975.1| DNA-cytosine methyltransferase [Methylobacter tundripaludum SV96] Length = 359 Score = 80.6 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 16/89 (17%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKIK 60 DLF G GG L + + + EIN ++ TY+ N L +I ++ Sbjct: 9 IDLFAGAGGFSL----AAKNVGFKVSAAIEINNHACTTYRQNLIEGNSTKLYQKNILELA 64 Query: 61 TQDIPD--------HDVLLAGFPCQPFSQ 81 ++I D++L G PCQ FS Sbjct: 65 PEEIKHAHFMDGAVCDIVLGGPPCQGFSV 93 >gi|228473386|ref|ZP_04058140.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga gingivalis ATCC 33624] gi|228275288|gb|EEK14086.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga gingivalis ATCC 33624] Length = 358 Score = 80.6 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 9/86 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 ML D+F G GG+ L E ++ + EINP + K++ N ++ GDI I Sbjct: 1 MLYGIDIFSGAGGLSLGAEMA----GIQICYGIEINPSAAKSFTRNHKGAKVLQGDIKDI 56 Query: 60 KTQDIPD-HD---VLLAGFPCQPFSQ 81 + + D +++ G PCQ FS Sbjct: 57 DPSKLKEGIDPVFIIMGGPPCQGFSL 82 >gi|318604073|emb|CBY25571.1| DNA-cytosine methyltransferase [Yersinia enterocolitica subsp. palearctica Y11] Length = 383 Score = 80.6 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 +K + F G+G IR L + +C ++++I+ + TY AN+ DI K+ Sbjct: 1 MKFAEFFAGVGLIREGLSSS----GWKCVWANDISADKMATYVANYGEEHFHLEDIWKVA 56 Query: 61 TQD---IPDHDVL-LAGFPCQPFSQAG 83 +P+ L A FPC S AG Sbjct: 57 ANPGAILPEGVFLYTASFPCTDLSVAG 83 >gi|26325124|dbj|BAC26316.1| unnamed protein product [Mus musculus] Length = 415 Score = 80.6 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ +L+ GIGG+ L ++ H + ++N + + Y+ NFP+T + I+ Sbjct: 4 LRVLELYSGIGGMHHALRKS--HIPAHVVAAIDVNTVANEVYKHNFPHTHLLS--KTIEG 59 Query: 62 QDIPDHD-----VLLAGFPCQPFSQAG 83 + D D ++L PCQPF++ G Sbjct: 60 ISLEDFDKLSFNMILMSPPCQPFTRIG 86 >gi|325679553|ref|ZP_08159133.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8] gi|324108840|gb|EGC03076.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8] Length = 708 Score = 80.6 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 11/88 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAK---- 58 + DLF G GG +E+ + + + + N +++T++ N P+T ++ GDI Sbjct: 351 VLDLFSGAGGFSYGIEK---NEHFRTAIALDFNEQALQTFKHNMPDTEIVHGDITDSAVK 407 Query: 59 ---IKTQDIPDHDVLLAGFPCQPFSQAG 83 I ++++ G PCQ FS G Sbjct: 408 ERIISLSKEKKVNMVIGGPPCQGFSLKG 435 >gi|291335050|gb|ADD94680.1| cytosine specific DNA methyltransferase DDEM [uncultured phage MedDCM-OCT-S08-C620] Length = 129 Score = 80.6 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 + F G GG L +++E + +TY+AN PN+++ D+ +I+ Sbjct: 29 FNVVSTFSGCGGSCLGYRMA----GYRVLYANEFIKAAQETYKANHPNSILDSNDVRQIR 84 Query: 61 TQDI--------PDHDVLLAGFPCQPFSQAG 83 ++I + D+ PC FS +G Sbjct: 85 PEEILERINLKKGELDLFDGSPPCASFSISG 115 >gi|331090172|ref|ZP_08339060.1| hypothetical protein HMPREF1025_02643 [Lachnospiraceae bacterium 3_1_46FAA] gi|330402118|gb|EGG81690.1| hypothetical protein HMPREF1025_02643 [Lachnospiraceae bacterium 3_1_46FAA] Length = 681 Score = 80.6 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L + ++SEI P+ ++ P +GD++++ Sbjct: 6 LTLGSLFDGSGGFPLG----GLISGITPVWASEIEPFPIRVTTKRLPFMKHYGDVSRMDG 61 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 I D++ G PCQ S AG Sbjct: 62 GKIEPVDIITFGSPCQDMSIAG 83 >gi|327535475|gb|AEA94309.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis OG1RF] Length = 363 Score = 80.6 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 10/92 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF---FSSEINPYSVKTYQANF----PNTLIFG 54 K+ +LFCG GGI L + + + ++++ + + +TY N P T+I Sbjct: 3 FKLGELFCGPGGIALGAMTSQSDDGIYKIDHAWANDFDKDTCQTYINNICPEKPETVICE 62 Query: 55 DIAKIKTQD---IPDHDVLLAGFPCQPFSQAG 83 DI K+ + I D D L GFPC FS G Sbjct: 63 DIRKLDFRKLKRISDIDGLAFGFPCNDFSIVG 94 >gi|237731054|ref|ZP_04561535.1| DNA-cytosine methyltransferase [Citrobacter sp. 30_2] gi|226906593|gb|EEH92511.1| DNA-cytosine methyltransferase [Citrobacter sp. 30_2] Length = 411 Score = 80.6 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60 + F G G R L C F+++++P TY N+ D+ +I Sbjct: 20 FSFYEFFAGGGMARAGL-----GNPWRCLFANDMDPIKASTYIDNWGGEHFDTRDVREIP 74 Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83 + D+P H D+ A FPCQ S AG Sbjct: 75 SNDLPRHADLTWASFPCQDLSLAG 98 >gi|169834659|ref|YP_001693426.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] gi|169123207|gb|ACA47042.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] Length = 490 Score = 80.2 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + +F G G + + + F+ + + + +TY N + ++ DI+K+ + Sbjct: 176 LTVCSIFSGAGLMDKSF-----LDDFDIIFALDNDRAACETYGKNLGSHILHEDISKV-S 229 Query: 62 QDIPDHDVLLAGFPCQPFS 80 +IP VL+ G PCQ FS Sbjct: 230 NNIPHATVLIGGSPCQGFS 248 >gi|325675056|ref|ZP_08154742.1| DNA (cytosine-5-)-methyltransferase [Rhodococcus equi ATCC 33707] gi|325554017|gb|EGD23693.1| DNA (cytosine-5-)-methyltransferase [Rhodococcus equi ATCC 33707] Length = 398 Score = 80.2 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 7/82 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + LF GIGG+ L L E EI+P + + + F + GD+ ++++ Sbjct: 17 NMVGLFAGIGGVELGL----RSHGWETELLCEIDPGAQQVLRTRFAGVELHGDVTRLRS- 71 Query: 63 DIPDH-DVLLAGFPCQPFSQAG 83 +P +++ AGFPCQ SQAG Sbjct: 72 -LPQRTELVAAGFPCQDLSQAG 92 >gi|294463393|gb|ADE77228.1| unknown [Picea sitchensis] Length = 380 Score = 80.2 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ + + GIGG+R LEQ+ H + + +IN + + Y+ NF ++ G+I + Sbjct: 12 FRVLEFYSGIGGMRFSLEQSGIHA--KVVEAFDINNIANEVYKHNFGHSPYQGNIQSLTA 69 Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83 + + L PCQP+++ G Sbjct: 70 SQLDKFRANAWLLSPPCQPYTRQG 93 >gi|218884576|ref|YP_002428958.1| Cytosine-specific DNA methylase [Desulfurococcus kamchatkensis 1221n] gi|218766192|gb|ACL11591.1| Cytosine-specific DNA methylase [Desulfurococcus kamchatkensis 1221n] Length = 324 Score = 80.2 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 K D+F G GG L T + + + + TY+ NFP+ L+ D+ ++ Sbjct: 5 YKYIDVFSGAGGFSLGFHLTGR---FKSLLAIDNFKPAALTYKTNFPHALVVNEDVKELD 61 Query: 61 TQDI-----PD-HDVLLAGFPCQPFSQA 82 + + PD DV++ PC+PF+ A Sbjct: 62 KELLTGIVKPDEIDVIIGSPPCEPFTGA 89 >gi|53728781|ref|ZP_00135132.2| COG0270: Site-specific DNA methylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 354 Score = 80.2 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--- 57 M + GI + + + + SEI P+ ++P+ GD+ Sbjct: 1 MFTYGSICSGI----EAVSVAWKGIG-KPVWFSEIEPFPCAVLAYHYPDIPNLGDMTALV 55 Query: 58 -KIKTQDIPDHDVLLAGFPCQPFSQAG 83 KI ++IP DVL+ G PCQ FS AG Sbjct: 56 PKILNREIPAPDVLVGGTPCQAFSVAG 82 >gi|293392447|ref|ZP_06636769.1| site-specific DNA methylase [Serratia odorifera DSM 4582] gi|291425101|gb|EFE98308.1| site-specific DNA methylase [Serratia odorifera DSM 4582] Length = 379 Score = 80.2 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 5/80 (6%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQD 63 + F GIG R +EQ ++ ++++ + Y+ ++ + L+ DI +K++D Sbjct: 15 LEFFAGIGLSRAGMEQA----GIKTIWANDYDQNKKSMYEGHWKSHELLLADIHALKSED 70 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P DV A PC S AG Sbjct: 71 LPAADVAWASSPCTDLSLAG 90 >gi|188533112|ref|YP_001906909.1| C-5 cytosine-specific DNA methylase family protein [Erwinia tasmaniensis Et1/99] gi|188028154|emb|CAO96012.1| C-5 cytosine-specific DNA methylase family protein [Erwinia tasmaniensis Et1/99] Length = 395 Score = 80.2 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 18/90 (20%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------PNTLIFGDIAK 58 DLF G GG L +E + E++ + TY N LI DI Sbjct: 13 IDLFSGAGGFSL----AALELGIEILAAIELDKDACDTYDKNLIQKRKNNIKLINKDIIA 68 Query: 59 IKTQDI--------PDHDVLLAGFPCQPFS 80 I ++ + D+++ G PCQ FS Sbjct: 69 IPPSELMDSLHLKERELDLIIGGPPCQGFS 98 >gi|302531731|ref|ZP_07284073.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302440626|gb|EFL12442.1| conserved hypothetical protein [Streptomyces sp. AA4] Length = 357 Score = 80.2 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 16/91 (17%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAKIKT 61 +F G+GG+ L E+ E + E + + T + NFP+ ++I DI + T Sbjct: 8 ISVFSGVGGLDLGAEKA----GFEVRAAVERDVNAADTMRKNFPHLAGSVICADILDVPT 63 Query: 62 QDI---------PDHDVLLAGFPCQPFSQAG 83 +I D+L+ G PC PFS++G Sbjct: 64 TEIMAAAGLSRRERPDLLIGGPPCTPFSKSG 94 >gi|307595752|ref|YP_003902069.1| DNA-cytosine methyltransferase [Vulcanisaeta distributa DSM 14429] gi|307550953|gb|ADN51018.1| DNA-cytosine methyltransferase [Vulcanisaeta distributa DSM 14429] Length = 321 Score = 80.2 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + DLF G GG + E++ + +T+ NFP +I DI + Sbjct: 3 YTVVDLFAGAGGFSRGF----KDVGFDVALGVEVDINAARTFSYNFPEAVMITDDIRNVS 58 Query: 61 TQDIPDH-----DVLLAGFPCQPFSQ 81 +DI + DV++ G PC+ F++ Sbjct: 59 GKDIIKYIGGRPDVIIGGSPCEAFTE 84 >gi|154173655|ref|YP_001409100.1| cytosine-specific methyltransferase NlaX [Campylobacter curvus 525.92] gi|112802981|gb|EAU00325.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Campylobacter curvus 525.92] Length = 352 Score = 80.2 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 5/79 (6%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKIKTQDIP 65 F GIG + F + F+ EI+ ++ ++Y AN +I ++ + Sbjct: 12 FSGIGSAEFAAREVF--AEYDMAFACEIDKFARQSYLANHAIDEKHFHCNIKELDAKIYT 69 Query: 66 D-HDVLLAGFPCQPFSQAG 83 D DVL+ G PCQ FS AG Sbjct: 70 DKVDVLIGGSPCQDFSLAG 88 >gi|145593130|ref|YP_001157427.1| DNA-cytosine methyltransferase [Salinispora tropica CNB-440] gi|145302467|gb|ABP53049.1| DNA-cytosine methyltransferase [Salinispora tropica CNB-440] Length = 652 Score = 80.2 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 13/87 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------IAK 58 DLF G GG+ L L + +++ +P SV+T++ ++P + D I + Sbjct: 54 ADLFSGAGGLSLGLTEA----GFRVVLAADRDPESVETHRHHYPGLTLDYDLGESANIRR 109 Query: 59 IKT--QDIPDHDVLLAGFPCQPFSQAG 83 I ++ ++L G PCQPFS+AG Sbjct: 110 IAALVKE-AGIELLTGGPPCQPFSRAG 135 >gi|269792571|ref|YP_003317475.1| DNA-cytosine methyltransferase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100206|gb|ACZ19193.1| DNA-cytosine methyltransferase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 350 Score = 80.2 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF---FSSEINPYSVKTYQANF----PNTLIFG 54 ++ +LFCG GG+ + ++++ + + +TY+ N P ++ Sbjct: 3 YRLGELFCGPGGLAYGAINARSADGKHFIVHEWANDYDKDTCETYRYNICPDRPESVYHE 62 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI K+ + D L GFPC FS G Sbjct: 63 DIRKLNMDKLTPIDALAFGFPCNDFSVVG 91 >gi|302876802|ref|YP_003845435.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|307687485|ref|ZP_07629931.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|302579659|gb|ADL53671.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] Length = 363 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 14/92 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------TLIFGD 55 DLF G GG+ + + + ++KT++AN L D Sbjct: 5 FTCVDLFSGAGGLSRGF----YDAGYDVVLGVDFDDAALKTFKANHGTAESMKLDLFNHD 60 Query: 56 IAKIKTQDIPD----HDVLLAGFPCQPFSQAG 83 + + + DVL+ G PCQ FS AG Sbjct: 61 NIDVIVDYLAEKNIQLDVLVGGPPCQGFSIAG 92 >gi|195996059|ref|XP_002107898.1| hypothetical protein TRIADDRAFT_49657 [Trichoplax adhaerens] gi|190588674|gb|EDV28696.1| hypothetical protein TRIADDRAFT_49657 [Trichoplax adhaerens] Length = 254 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 48/85 (56%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +++ + + GIGG+ L+++ + N + + +IN + Y+ NF NT ++ +I KI Sbjct: 9 MQVVEFYSGIGGMHYALQES--NINAKILAAIDINTVANNVYRHNFGNTPVWQREIGKIS 66 Query: 61 TQDIPDH--DVLLAGFPCQPFSQAG 83 +++ + D+ PCQPF++ G Sbjct: 67 LKELQELNGDLYTMSPPCQPFTRLG 91 >gi|153932387|ref|YP_001385110.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|153937602|ref|YP_001388579.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|152928431|gb|ABS33931.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|152933516|gb|ABS39015.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] Length = 350 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 7/90 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECF--FSSEINPYSVKTYQANF----PNTLIF 53 + ++ +LFCG GG+ + + + ++++ + + TY N P ++I Sbjct: 2 IFQLGELFCGPGGLGYGAKTAEIKNNKYKIVHKWANDYDRDTCDTYIHNICPDDPESVIC 61 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D+ K+ + D L GFPC FS G Sbjct: 62 QDVRKLDIDSLESIDALAFGFPCNDFSVVG 91 >gi|296448772|ref|ZP_06890624.1| DNA-cytosine methyltransferase [Methylosinus trichosporium OB3b] gi|296253709|gb|EFH00884.1| DNA-cytosine methyltransferase [Methylosinus trichosporium OB3b] Length = 297 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K LF GIGG+ L L + + EC +E P + A FP GDIA ++ Sbjct: 1 MKTVGLFAGIGGLELGLARAGH----ECLLVAENWPLAAGVLAARFPGLPNAGDIASLRR 56 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 +P +++ AGFPCQ SQAG Sbjct: 57 --LPGGTELVAAGFPCQDLSQAG 77 >gi|241661827|ref|YP_002980187.1| DNA-cytosine methyltransferase [Ralstonia pickettii 12D] gi|240863854|gb|ACS61515.1| DNA-cytosine methyltransferase [Ralstonia pickettii 12D] Length = 398 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 21/94 (22%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--------------FPNT 50 DLF G GG L + + + E++ + +TY AN + Sbjct: 42 VDLFAGAGGFSLAAHKA----GMRVVAAVELDKKASETYHANLIKRRKKVSDRPRLYSEN 97 Query: 51 LIFGDIAKIKTQDIPD---HDVLLAGFPCQPFSQ 81 ++ + K+++ P+ D++L G PCQ FS Sbjct: 98 IMELSPERFKSENFPEGASCDIVLGGPPCQGFSV 131 >gi|70734372|ref|YP_260119.1| DNA-cytosine methyltransferase [Pseudomonas fluorescens Pf-5] gi|68348671|gb|AAY96277.1| DNA-cytosine methyltransferase [Pseudomonas fluorescens Pf-5] Length = 394 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 L+ + F G G R L +C F+++++ TY N+ + DI ++ Sbjct: 5 LRFFEFFAGGGMARAGL-----GNQWQCLFANDMDRIKASTYIQNWGKDHFDSRDIREVN 59 Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83 ++D+ + D+ A FPCQ S AG Sbjct: 60 SEDLERNGDLAWASFPCQDLSVAG 83 >gi|26341152|dbj|BAC34238.1| unnamed protein product [Mus musculus] Length = 415 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ +L+ GIGG+ L ++ H + ++N + + Y+ NFP+T + I+ Sbjct: 4 LRVLELYSGIGGMHHALRES--HIPAHVVAAIDVNTVANEVYKHNFPHTHLLS--KTIEG 59 Query: 62 QDIPDHD-----VLLAGFPCQPFSQAG 83 + D D ++L PCQPF++ G Sbjct: 60 ISLEDFDKLSFNMILMSPPCQPFTRIG 86 >gi|2895947|gb|AAC40130.1| putative DNA cytosine methyltransferase DNMT2 [Mus musculus] Length = 415 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ +L+ GIGG+ L ++ H + ++N + + Y+ NFP+T + I+ Sbjct: 4 LRVLELYSGIGGMHHALRES--HIPAHVVAAIDVNTVANEVYKHNFPHTHLLS--KTIEG 59 Query: 62 QDIPDHD-----VLLAGFPCQPFSQAG 83 + D D ++L PCQPF++ G Sbjct: 60 ISLEDFDKLSFNMILMSPPCQPFTRIG 86 >gi|161016803|ref|NP_034197.3| tRNA (cytosine-5-)-methyltransferase [Mus musculus] gi|20141317|sp|O55055|TRDMT_MOUSE RecName: Full=tRNA (cytosine-5-)-methyltransferase; AltName: Full=DNA (cytosine-5)-methyltransferase-like protein 2; Short=Dnmt2; AltName: Full=DNA methyltransferase homolog MmuIIP; Short=DNA MTase homolog MmuIIP; Short=M.MmuIIP; AltName: Full=Met-2 gi|2627433|gb|AAC53529.1| putative DNA methyltransferase [Mus musculus] gi|56971714|gb|AAH87892.1| TRNA aspartic acid methyltransferase 1 [Mus musculus] gi|123857912|emb|CAM15443.1| tRNA aspartic acid methyltransferase 1 [Mus musculus] gi|123858289|emb|CAM16855.1| tRNA aspartic acid methyltransferase 1 [Mus musculus] gi|148676105|gb|EDL08052.1| DNA methyltransferase 2 [Mus musculus] Length = 415 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ +L+ GIGG+ L ++ H + ++N + + Y+ NFP+T + I+ Sbjct: 4 LRVLELYSGIGGMHHALRES--HIPAHVVAAIDVNTVANEVYKHNFPHTHLLS--KTIEG 59 Query: 62 QDIPDHD-----VLLAGFPCQPFSQAG 83 + D D ++L PCQPF++ G Sbjct: 60 ISLEDFDKLSFNMILMSPPCQPFTRIG 86 >gi|229825108|ref|ZP_04451177.1| hypothetical protein GCWU000182_00458 [Abiotrophia defectiva ATCC 49176] gi|331003746|ref|ZP_08327240.1| hypothetical protein HMPREF0491_02102 [Lachnospiraceae oral taxon 107 str. F0167] gi|229790480|gb|EEP26594.1| hypothetical protein GCWU000182_00458 [Abiotrophia defectiva ATCC 49176] gi|330412129|gb|EGG91524.1| hypothetical protein HMPREF0491_02102 [Lachnospiraceae oral taxon 107 str. F0167] Length = 305 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGGI L E E + + ++P F DI + Sbjct: 4 LTHFSLFTGIGGIDLAAEAA----GFSTICQCEWADFPTAVLKKHWPKVPRFQDITTVTK 59 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + ++ GFPCQPFS G Sbjct: 60 EAFIEKTGQESVTLISGGFPCQPFSAIG 87 >gi|154508844|ref|ZP_02044486.1| hypothetical protein ACTODO_01354 [Actinomyces odontolyticus ATCC 17982] gi|153798478|gb|EDN80898.1| hypothetical protein ACTODO_01354 [Actinomyces odontolyticus ATCC 17982] Length = 355 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 22/99 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ----------AN----F 47 +++ L+ G GG+ L + FS++IN +V TY+ N F Sbjct: 1 MRLISLYSGAGGLDLGFAKA----GFIPVFSADINRDAVDTYRTISKAVQGEWKNAAVLF 56 Query: 48 PNT-LIFGDIAKIKTQDIP--DHDVLLAGFPCQPFSQAG 83 N + GD+ ++ D+ D ++++ G PCQ FS G Sbjct: 57 ENCDVRCGDV-LAESNDLSAGDAEIVIGGPPCQGFSVGG 94 >gi|293395454|ref|ZP_06639738.1| modification methylase HgiDII [Serratia odorifera DSM 4582] gi|291422138|gb|EFE95383.1| modification methylase HgiDII [Serratia odorifera DSM 4582] Length = 354 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 13/86 (15%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ- 62 D FCG GG L Q + +++ + +TY+ANFP+ IF DI + + Sbjct: 4 IDFFCGCGGASEGLRQA----GFDVVLGIDVDQQASETYKANFPDADFIFDDIRNVTVER 59 Query: 63 -----DIPDHDVLL--AGFPCQPFSQ 81 D LL A PCQPFSQ Sbjct: 60 VANSIAFKSADGLLLSACAPCQPFSQ 85 >gi|325564098|gb|ADZ31419.1| M.SfoI [Serratia fonticola] Length = 385 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKI- 59 ++ + F G+G +R LE +C ++++I+ + TY N+ + DI K+ Sbjct: 1 MRFAEFFAGVGLVREGLE----GSGWQCVWANDISADKMSTYVENYGDDHFHLEDIWKVA 56 Query: 60 -KTQDIPDHDVLL--AGFPCQPFSQAG 83 + I DV L A FPC S AG Sbjct: 57 AEPDGILPKDVFLYTASFPCTDLSVAG 83 >gi|323139578|ref|ZP_08074623.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242] gi|322395197|gb|EFX97753.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242] Length = 381 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 8/83 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAK 58 M + F G G R L C F+++ + +YQAN+ L+ GD+ K Sbjct: 1 MPDFYEFFAGGGMARKGL-----GAGWTCQFANDFDHKKALSYQANWGTGGELLVGDVRK 55 Query: 59 IKTQDIPDH-DVLLAGFPCQPFS 80 + +P D++ FPCQ S Sbjct: 56 VTASQLPGCADLIWGSFPCQDLS 78 >gi|229844460|ref|ZP_04464600.1| modification methylase Bsp6I-like protein [Haemophilus influenzae 6P18H1] gi|229812709|gb|EEP48398.1| modification methylase Bsp6I-like protein [Haemophilus influenzae 6P18H1] Length = 387 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M + GI + + + + SEI P+ ++PN GD+ + Sbjct: 1 MFTYGSICSGI----EAVSVAWKGLG-KPLWFSEIEPFPCAVLAYHYPNIPNLGDMTTLP 55 Query: 61 TQ----DIPDHDVLLAGFPCQPFSQAG 83 + +IP DVL+ G PCQ FS AG Sbjct: 56 EKILNREIPAPDVLVGGTPCQAFSVAG 82 >gi|240119361|dbj|BAH79224.1| methylase EcoO109IM [Escherichia coli O157:H7] Length = 414 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 14/91 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT 61 K LF G G+ L LE+ E E + ++KT + N PN +F G I Sbjct: 5 KFISLFSGAMGLDLGLEEA----GFELVACVEQDKAALKTIKTNKPNLAVFEGSIVDCTG 60 Query: 62 QDI---------PDHDVLLAGFPCQPFSQAG 83 ++ + D++ G PCQ FS G Sbjct: 61 SELLALAGVNDKEEIDLVAGGPPCQAFSVFG 91 >gi|6318608|gb|AAF06965.1|AF157599_4 EcoO109IM [Escherichia coli] Length = 414 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 14/91 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT 61 K LF G G+ L LE+ E E + ++KT + N PN +F G I Sbjct: 5 KFISLFSGAMGLDLGLEEA----GFELVACVEQDKAALKTIKTNKPNLAVFEGSIVDCTG 60 Query: 62 QDI---------PDHDVLLAGFPCQPFSQAG 83 ++ + D++ G PCQ FS G Sbjct: 61 SELLALAGVNDKEEIDLVAGGPPCQAFSVFG 91 >gi|42779446|ref|NP_976693.1| DNA-cytosine methyltransferase family protein [Bacillus cereus ATCC 10987] gi|42735362|gb|AAS39301.1| DNA-cytosine methyltransferase family protein [Bacillus cereus ATCC 10987] Length = 350 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%) Query: 1 MLKITDLFCGIGGIRLD-LEQTFNHRNVECF--FSSEINPYSVKTYQANF----PNTLIF 53 + ++ +LFCG GGI + + N ++++ + + +TY+ N PNT+ Sbjct: 2 IFRLGELFCGPGGIAWGAMNASIEDPNFAIVHQWANDYDADTCETYRLNICPDTPNTVYH 61 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI K + D L GFPC +S G Sbjct: 62 ADIRKFDMSKLAPIDALAFGFPCNDYSVVG 91 >gi|222053814|ref|YP_002536176.1| DNA-cytosine methyltransferase [Geobacter sp. FRC-32] gi|221563103|gb|ACM19075.1| DNA-cytosine methyltransferase [Geobacter sp. FRC-32] Length = 381 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAK 58 M + F G G R+ L + EC F+++ +P +Y+ F + + D+AK Sbjct: 1 MKTFYEFFAGGGMARIGL-----GKGWECVFANDFDPKKAISYRTYFRGNDHFVVEDVAK 55 Query: 59 IKTQD-IPDHDVLLAGFPCQPFSQAG 83 I+T + D+ A FPCQ S AG Sbjct: 56 IQTSQLLGTADLTWASFPCQDLSLAG 81 >gi|283466067|emb|CBG92842.1| hypothetical protein [Enterococcus casseliflavus] Length = 359 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF GIG L ++ + + ++SEI ++ + FP+ + GD+ K+ Sbjct: 7 LTLGSLFDGIGVFPLAAQK----QGITLSWASEIEKAPIRITKKQFPHMIHLGDLTKLHG 62 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP D++ G PCQ S G Sbjct: 63 GKIPPVDIVTFGSPCQNLSTIG 84 >gi|198430517|ref|XP_002128135.1| PREDICTED: similar to DNA methyltransferase 2 [Ciona intestinalis] Length = 343 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 LK+ +L+ GIGG+ L N +N E S +I+P + Y+ NFP T + I Sbjct: 5 LKVLELYSGIGGMHYALLGA-NLKNCEVVCSVDISPAASLVYKHNFPGTKHWERSIEGFS 63 Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83 +D + + L+ PCQPF++ G Sbjct: 64 AKDFDNMGFNTLMMSPPCQPFTRVG 88 >gi|291618481|ref|YP_003521223.1| Bsp6IM [Pantoea ananatis LMG 20103] gi|291153511|gb|ADD78095.1| Bsp6IM [Pantoea ananatis LMG 20103] Length = 384 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 5/80 (6%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 + F GIG R +EQ ++ ++++ + Y+ ++ + + DI +K+++ Sbjct: 15 LEFFAGIGLARAGMEQA----GIKTVWANDYDVNKKAMYEGHWQSADFLLADIHSLKSEE 70 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +PD DV A PC S AG Sbjct: 71 LPDADVAWASSPCTDLSLAG 90 >gi|189404646|ref|ZP_02809925.2| modification methylase SinI [Escherichia coli O157:H7 str. EC869] gi|189375083|gb|EDU93499.1| modification methylase SinI [Escherichia coli O157:H7 str. EC869] Length = 417 Score = 79.8 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 14/91 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT 61 K LF G G+ L LE+ E E + ++KT + N PN +F G I Sbjct: 8 KFISLFSGAMGLDLGLEEA----GFELVACVEQDKAALKTIKTNKPNLAVFEGSIVDCTG 63 Query: 62 QDI---------PDHDVLLAGFPCQPFSQAG 83 ++ + D++ G PCQ FS G Sbjct: 64 SELLALAGVNDKEEIDLVAGGPPCQAFSVFG 94 >gi|285017024|ref|YP_003374735.1| DNA (cytosine-5-)-methyltransferase [Xanthomonas albilineans GPE PC73] gi|283472242|emb|CBA14748.1| putative dna (cytosine-5-)-methyltransferase protein [Xanthomonas albilineans] Length = 429 Score = 79.4 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF G+ + EC +EI+ + + P+ G++ +I Sbjct: 16 MRYLSLFSGL----EAAHLALSPLGWECVGVAEIDAAACALLRHRLPHVPNLGNVTEITD 71 Query: 62 QDIPD---HDVLLAGFPCQPFSQAG 83 I DV++ G PCQ S AG Sbjct: 72 AVIAQLGAIDVVIGGSPCQDLSVAG 96 >gi|312902260|ref|ZP_07761468.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0635] gi|310634319|gb|EFQ17602.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0635] Length = 359 Score = 79.4 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF GIG L ++ + + ++SEI ++ + FP+ + GD+ K+ Sbjct: 7 LTLGSLFDGIGVFPLAAQK----QGITLSWASEIEKAPIRITKKQFPHMIHLGDLTKLHG 62 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP D++ G PCQ S G Sbjct: 63 GKIPPVDIVTFGSPCQNLSTIG 84 >gi|9632084|ref|NP_048873.1| hypothetical protein PBCV1_A517L [Paramecium bursaria Chlorella virus 1] gi|1620188|gb|AAC96884.1| M.CviAII cytosine DNA methyltransferase [Paramecium bursaria Chlorella virus 1] Length = 344 Score = 79.4 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML+ DLF GIGGI L V E N + Q +P+ +F D+ Sbjct: 1 MLRALDLFSGIGGITYGLRGI-----VTPIAYVEKNEDARGFLQRKYPDVPVFDDVCTFD 55 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 + D++ AG+PC FS AG Sbjct: 56 AIEWKGKVDIITAGWPCTGFSTAG 79 >gi|332665156|ref|YP_004447944.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM 1100] gi|332333970|gb|AEE51071.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM 1100] Length = 416 Score = 79.4 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 39/106 (36%), Gaps = 28/106 (26%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 + LF G GG+ + LEQ E + T + N P L+F Sbjct: 27 YNVVSLFSGAGGLDIGLEQA----GFRTAVCVENDLNCRTTLRHNRPEWLLFDHPTKVLN 82 Query: 54 --------GDIAKIKTQDIPDH--------DVLLAGFPCQPFSQAG 83 GDI I +++ + +++ G PCQPFS G Sbjct: 83 EKIITRAPGDIRHIDAEELLEFAGLKPGKVALVVGGAPCQPFSNIG 128 >gi|317481261|ref|ZP_07940332.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36] gi|316902594|gb|EFV24477.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36] Length = 461 Score = 79.4 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 7/85 (8%) Query: 2 LKIT--DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +K+ LF G E F E+N + + FPN+ + DIAK Sbjct: 1 MKLVHGSLFSG---FD-APSIASFQMGWENAFHCEVNDFCNIILKYWFPNSEHYEDIAKT 56 Query: 60 KTQDIP-DHDVLLAGFPCQPFSQAG 83 + D+L GFPCQPFS AG Sbjct: 57 DFKKWRGKIDILTGGFPCQPFSVAG 81 >gi|298714740|emb|CBJ25639.1| Cytosine-C5 specific DNA methyltransferase [Ectocarpus siliculosus] Length = 412 Score = 79.4 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + + GIGG+R+ LE+ ++E S EI+ + Y+ NFP + I + Q Sbjct: 56 LEFYSGIGGLRVSLEKALEAVSLETSVGSFEISSVANSVYEHNFPGCSVTRRSIEHLSAQ 115 Query: 63 DIP-DHDVLLAGFPCQPFSQAG 83 DI D D+ L PCQPF + G Sbjct: 116 DIEVDADIWLLSPPCQPFCRVG 137 >gi|194335097|ref|YP_002016957.1| DNA-cytosine methyltransferase [Prosthecochloris aestuarii DSM 271] gi|194312915|gb|ACF47310.1| DNA-cytosine methyltransferase [Prosthecochloris aestuarii DSM 271] Length = 340 Score = 79.4 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 13/88 (14%) Query: 2 LKIT--DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAK 58 +K+ D+F G+GG+ L + + + EI+ + K Y+ N T +I DI Sbjct: 1 MKLISIDIFSGVGGLTEGLHKA----GFQTELAFEIDELASKVYKLNHKKTKVITDDIRN 56 Query: 59 IKTQDIPD------HDVLLAGFPCQPFS 80 I T+++ +L PCQ FS Sbjct: 57 ISTENVKQELGNKTIHLLAGCPPCQGFS 84 >gi|323139132|ref|ZP_08074189.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242] gi|322395603|gb|EFX98147.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242] Length = 421 Score = 79.4 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 8/83 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAK 58 M + F G G R L C F+++ + +YQAN+ L+ GD+ K Sbjct: 41 MPDFYEFFAGGGMARKGL-----GAGWTCLFANDFDHKKGLSYQANWGTGGELLVGDVRK 95 Query: 59 IKTQDIPDH-DVLLAGFPCQPFS 80 + +P D++ FPCQ S Sbjct: 96 VTPSQLPGCADLVWGSFPCQDLS 118 >gi|170757755|ref|YP_001781752.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] gi|169122967|gb|ACA46803.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] Length = 561 Score = 79.4 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 4/85 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAK 58 MLK+ LF GIG L+ E E++ Y+VK+Y + GDI K Sbjct: 1 MLKVRTLFSGIGSPERALKDL--QIPYELVDFCEVDKYAVKSYCSVHGVSEEKNLGDITK 58 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + +++P D+L+ GFPC S AG Sbjct: 59 VWGRNLPYADLLVWGFPCPDISVAG 83 >gi|60098349|emb|CAH65005.1| hypothetical protein RCJMB04_1a16 [Gallus gallus] Length = 102 Score = 79.4 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 L++ +L+ GIGG+ L+++ E + ++N + + Y+ NFP+T ++ I I Sbjct: 4 LRVLELYSGIGGMHQALKESCICA--EVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGIT 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQ 81 ++ D++L PCQPF++ Sbjct: 62 LKEFDRLSFDMILMSPPCQPFTR 84 >gi|302789792|ref|XP_002976664.1| hypothetical protein SELMODRAFT_105635 [Selaginella moellendorffii] gi|300155702|gb|EFJ22333.1| hypothetical protein SELMODRAFT_105635 [Selaginella moellendorffii] Length = 334 Score = 79.4 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ + + GIGG+R LE+ + + EIN + Y+ NF + G+I ++ Sbjct: 8 LRVLEFYSGIGGLRFSLEEA--KIDATVVEAFEINELANDVYERNFGHRPNQGNIQRLSV 65 Query: 62 QDIP--DHDVLLAGFPCQPFSQAG 83 D+ + D L PCQP+++ G Sbjct: 66 SDLDKYEADAWLLSPPCQPYTRQG 89 >gi|19112479|ref|NP_595687.1| DNA methyltransferase homolog [Schizosaccharomyces pombe 972h-] gi|730347|sp|P40999|PMT1M_SCHPO RecName: Full=DNA methyltransferase homolog pmt1; AltName: Full=M.SpomI; AltName: Full=SpIM.SpoI gi|563911|emb|CAA57824.1| methyltransferase [Schizosaccharomyces pombe] gi|5689984|emb|CAB52029.1| DNA methyltransferase homolog [Schizosaccharomyces pombe] Length = 330 Score = 79.4 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ +L+ GIGG+ L + + + +INP + + Y N DI+ + Sbjct: 7 LRVLELYSGIGGMHYALNLA--NIPADIVCAIDINPQANEIYNLNHGKLAKHMDISTLTA 64 Query: 62 QDIPDHD--VLLAGFPCQPFSQAG 83 +D D + CQPF++ G Sbjct: 65 KDFDAFDCKLWTMSPSCQPFTRIG 88 >gi|308061350|gb|ADO03238.1| cytosine specific DNA methyltransferase [Helicobacter pylori Cuz20] Length = 355 Score = 79.4 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPN-TLIFGDIA 57 KI DLFCG GG LE+ ++C + ++ T++ N N T + GDI Sbjct: 3 YKILDLFCGAGGFSAGLERLKEFDALIGLDC------DKQALITFENNHKNATGVCGDIT 56 Query: 58 KIKTQD-------IPDHDVLLAGFPCQPFSQAG 83 +I+ ++ ++++ G PCQ FS G Sbjct: 57 QIEIKEKVIKLAQTLKINMIIGGPPCQGFSNKG 89 >gi|296393591|ref|YP_003658475.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985] gi|296180738|gb|ADG97644.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985] Length = 372 Score = 79.4 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 23 NHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIP---DHDVLLAGFPCQP 78 + E + + T +ANFP+T I GD+ + +I + D++ G PCQP Sbjct: 22 ERAGFQAAALVEFDKNACATLRANFPDTPVIEGDVRGVDWSEIAAPGETDLVAGGPPCQP 81 Query: 79 FSQAG 83 FS AG Sbjct: 82 FSLAG 86 >gi|256419690|ref|YP_003120343.1| DNA-cytosine methyltransferase [Chitinophaga pinensis DSM 2588] gi|256034598|gb|ACU58142.1| DNA-cytosine methyltransferase [Chitinophaga pinensis DSM 2588] Length = 390 Score = 79.4 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 14/93 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF------GD 55 +K+ DL+CG GG+ + E + E + ++VKT+ N P D Sbjct: 4 IKVLDLYCGYGGLSMGFE---FTKAFEVVGGIDFYDWAVKTFYYNHPQLNKLKVINKPCD 60 Query: 56 IAKIKTQDI-----PDHDVLLAGFPCQPFSQAG 83 + ++T ++ D+++ G PCQ FS AG Sbjct: 61 MTNLETSEVLKDIGGKPDIIVGGPPCQGFSFAG 93 >gi|302876780|ref|YP_003845413.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|307687461|ref|ZP_07629907.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|302579637|gb|ADL53649.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] Length = 578 Score = 79.4 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G G L + ++SEI P+ V+ P GDI + Sbjct: 5 LTLGSLFDGSAGFPLG----GLISGITPLWASEIEPFPVRVTTKRLPQVEHLGDITTLNG 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + D++ G PCQ S AG Sbjct: 61 STLAPVDIITFGSPCQDMSVAG 82 >gi|257867242|ref|ZP_05646895.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC30] gi|257873577|ref|ZP_05653230.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC10] gi|257801298|gb|EEV30228.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC30] gi|257807741|gb|EEV36563.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC10] Length = 373 Score = 79.0 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF GIG L ++ + + ++SEI ++ + FP+ + GD+ K+ Sbjct: 21 LTLGSLFDGIGVFPLAAQK----QGITLSWASEIEKAPIRITKKQFPHMIHLGDLTKLHG 76 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 IP D++ G PCQ S G Sbjct: 77 GKIPPVDIVTFGSPCQNLSTIG 98 >gi|330939305|gb|EGH42698.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. pisi str. 1704B] Length = 382 Score = 79.0 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 7/85 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M + F G G R L EC +++++ Y N+ + L+ GD+A++ Sbjct: 1 MASFYEFFAGGGMARAGL-----GAEWECLLANDLSTQKAACYAENWGDDHLLIGDVAEL 55 Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83 T+D+P H D+ A FPCQ S AG Sbjct: 56 TTKDLPGHADLAWASFPCQDLSLAG 80 >gi|325696380|gb|EGD38271.1| modification methylase HgiDII [Streptococcus sanguinis SK160] Length = 358 Score = 79.0 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQD 63 DLF G GG L+++ + + EI+P +VKTY+ N P +I DI + + Sbjct: 7 IDLFSGAGGTTSGLKKS----GINVQVAIEIDPVAVKTYKLNNPEVYVIDRDIKLVSGDE 62 Query: 64 IPDH-----D---VLLAGFPCQPFSQAG 83 I H D +L+A PCQ FS G Sbjct: 63 IKQHLKIGSDDKVMLVACPPCQGFSTIG 90 >gi|296814510|ref|XP_002847592.1| site-specific DNA-methyltransferase HphI [Arthroderma otae CBS 113480] gi|238840617|gb|EEQ30279.1| site-specific DNA-methyltransferase HphI [Arthroderma otae CBS 113480] Length = 586 Score = 79.0 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 D FCG GG+ +Q ++ ++ + +P ++ +Y+ANFP++L D+A Sbjct: 294 YTFGDGFCGAGGVSRGAQQA----GLKLTWAFDHSPSAMNSYRANFPSSLAETSDVADFL 349 Query: 61 TQDIPD--HDVLLAGFPCQPFSQA 82 T I D DVL A PCQPFS A Sbjct: 350 TNSIWDIIVDVLHASPPCQPFSPA 373 >gi|308229535|gb|ADO24183.1| M.AscI [Arthrobacter sp. NEB 688] Length = 400 Score = 79.0 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 5/82 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKT 61 + F G+G I + C +++ +P V+ Y+AN+PN + DI + Sbjct: 15 TFVEYFAGVGLIH----EALRPLGWTCQLANDNDPKKVRAYEANYPNVPVSALDIRDLSA 70 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 DIP + A FPC SQAG Sbjct: 71 SDIPPATLATASFPCIDLSQAG 92 >gi|251789087|ref|YP_003003808.1| DNA-cytosine methyltransferase [Dickeya zeae Ech1591] gi|247537708|gb|ACT06329.1| DNA-cytosine methyltransferase [Dickeya zeae Ech1591] Length = 411 Score = 79.0 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 + F G G R L + +C F+++++P TY N+ + D+ ++ Sbjct: 20 FSFYEFFAGGGMARAGL-----GKQWQCLFANDMDPIKASTYIDNWGDEHFDIRDVREVA 74 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 ++P D+ A FPCQ S AG Sbjct: 75 PDELPLHADLSWASFPCQDLSLAG 98 >gi|212716999|ref|ZP_03325127.1| hypothetical protein BIFCAT_01946 [Bifidobacterium catenulatum DSM 16992] gi|212660059|gb|EEB20634.1| hypothetical protein BIFCAT_01946 [Bifidobacterium catenulatum DSM 16992] Length = 392 Score = 79.0 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 9/84 (10%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKIK 60 + F GIG RL LE++ + +S++I+ + Y+ NF +TL+ GD++++ Sbjct: 18 LEFFAGIGLARLGLEES----GFQVEWSNDIDSAKCEMYRNNFTDTPGHTLVEGDMSELS 73 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 D+P D + PC S AG Sbjct: 74 GDDLPHDASIAWGSSPCTDLSLAG 97 >gi|239999928|ref|ZP_04719852.1| NgoIM [Neisseria gonorrhoeae 35/02] gi|240116859|ref|ZP_04730921.1| NgoIM [Neisseria gonorrhoeae PID1] gi|240127204|ref|ZP_04739865.1| NgoIM [Neisseria gonorrhoeae SK-93-1035] Length = 278 Score = 79.0 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 1/41 (2%) Query: 43 YQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 Y+ANF FGDI I DIPDHD+LLAGFPCQPFS AG Sbjct: 2 YEANFGEKP-FGDINGIDPSDIPDHDILLAGFPCQPFSIAG 41 >gi|156552675|ref|XP_001599223.1| PREDICTED: similar to DNA cytosine-5 methyltransferase 3B2 [Nasonia vitripennis] Length = 1093 Score = 79.0 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFN-HRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI 59 +++ LF GIG L + + N+EC+++SEI+P S++ N N +I GD+ I Sbjct: 824 IRVLSLFDGIG---TGLVVLKHLNVNIECYYASEIDPDSMQVSFFNHGNEIIQLGDVRNI 880 Query: 60 KT---QDIPDHDVLLAGFPCQPFSQA 82 ++I D+L+ G PC S A Sbjct: 881 DEKKIKEIAPIDLLIGGSPCNELSLA 906 >gi|113477918|ref|YP_723979.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] gi|110168966|gb|ABG53506.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] Length = 337 Score = 79.0 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 4 ITDLFCGIGGIRLDLE-QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + D+F G GG+ L E Q F E+N TY N IA Sbjct: 21 VIDIFAGCGGLSLGFEAQGFTTHGF------EMNADCCATYNKNLKGNCTQ--IALTSET 72 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 +P V++ G PCQPFS G Sbjct: 73 KLPPGKVIIGGPPCQPFSVGG 93 >gi|79835466|gb|ABB52093.1| Mod [Arthrospira platensis] gi|291569838|dbj|BAI92110.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39] Length = 345 Score = 79.0 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 8/81 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLF G GG L + + E+ + TY N + QD Sbjct: 27 VLDLFAGCGGFSLGFKAA----GFQTIGY-EMLADAAATYTRNLQDPCYCQ--TLEIGQD 79 Query: 64 IPDH-DVLLAGFPCQPFSQAG 83 + +H DV++ G PCQPFS G Sbjct: 80 LCNHPDVIIGGPPCQPFSVGG 100 >gi|298374832|ref|ZP_06984790.1| cytosine-specific methyltransferase [Bacteroides sp. 3_1_19] gi|298269200|gb|EFI10855.1| cytosine-specific methyltransferase [Bacteroides sp. 3_1_19] Length = 403 Score = 79.0 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 22/99 (22%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---------FPN--TL 51 K DLF G GG+ L L + + F+ E +P++ +T + N +P+ Sbjct: 9 KYIDLFAGCGGLSLGL----HLSGWKGLFAIEKSPFAFETLKYNLIDNKKHFDWPSWLEC 64 Query: 52 IFGDIAKIKTQD-------IPDHDVLLAGFPCQPFSQAG 83 DI + D++ G PCQ FS AG Sbjct: 65 KEHDIYDVLKSHQEQLKSLRGTIDLVAGGPPCQGFSMAG 103 >gi|260796005|ref|XP_002592995.1| hypothetical protein BRAFLDRAFT_275730 [Branchiostoma floridae] gi|229278219|gb|EEN49006.1| hypothetical protein BRAFLDRAFT_275730 [Branchiostoma floridae] Length = 386 Score = 78.6 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Query: 2 LKITDLFCGIGGIRLD-LEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 L++ + + G+GG+ LE + +IN + Y+ NFP+ L+ DI I Sbjct: 11 LRVVEFYSGVGGMHYAVLES---KVPATVVAALDINTTANAVYRHNFPHVNLLQRDITGI 67 Query: 60 KTQDI--PDHDVLLAGFPCQPFSQAG 83 K + + DV + PCQPF++ G Sbjct: 68 KLPEFQSWNADVFMMSPPCQPFTRVG 93 >gi|169794286|ref|YP_001712079.1| putative cytosine-specific methyltransferase [Acinetobacter baumannii AYE] gi|213159140|ref|YP_002321138.1| DNA cytosine methyltransferase [Acinetobacter baumannii AB0057] gi|215481844|ref|YP_002324026.1| Modification methylase HgiDII(Cytosine-specificmethyltransferase HgiDII) [Acinetobacter baumannii AB307-0294] gi|332850048|ref|ZP_08432435.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii 6013150] gi|332871527|ref|ZP_08440021.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii 6013113] gi|169147213|emb|CAM85072.1| putative cytosine-specific methyltransferase [Acinetobacter baumannii AYE] gi|213058300|gb|ACJ43202.1| DNA cytosine methyltransferase [Acinetobacter baumannii AB0057] gi|213986404|gb|ACJ56703.1| Modification methylase HgiDII(Cytosine-specificmethyltransferase HgiDII) [Acinetobacter baumannii AB307-0294] gi|332730897|gb|EGJ62203.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii 6013150] gi|332731381|gb|EGJ62673.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii 6013113] Length = 355 Score = 78.6 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 15/90 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 +K+ D F G GG L Q ++ + + + +TYQANFP L + DI ++ Sbjct: 1 MKVIDFFSGCGGASEGLRQA----GLDITIGLDFDIKAAETYQANFPEALFYNVDIRELD 56 Query: 61 TQDIPDHD----------VLLAGFPCQPFS 80 +++ + +A PCQPFS Sbjct: 57 EKELAKAFKEKNREKEPLLFVACAPCQPFS 86 >gi|294635767|ref|ZP_06714227.1| C-5 cytosine-specific DNA methylase family protein [Edwardsiella tarda ATCC 23685] gi|291090867|gb|EFE23428.1| C-5 cytosine-specific DNA methylase family protein [Edwardsiella tarda ATCC 23685] Length = 403 Score = 78.6 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 18/93 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL------IFGD 55 +K DLF G GG L F ++ + E++ + TY N L D Sbjct: 1 MKAIDLFAGAGGFSLA---AFE-VGIDVQAAIELDKQASDTYYHNLVEKLGAQTQVFSQD 56 Query: 56 IAKIKTQDIPDH--------DVLLAGFPCQPFS 80 I + + D+LL G PCQ FS Sbjct: 57 INDVDIGSMMKFQGIKQGQLDILLGGPPCQGFS 89 >gi|290968468|ref|ZP_06560007.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1 str. 28L] gi|290781464|gb|EFD94053.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1 str. 28L] Length = 699 Score = 78.6 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 11/90 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK-- 58 +I DLFCG GG+ + + + + +IN +T++ N P LI GDI Sbjct: 338 FRILDLFCGAGGMSYGMHKNSH---FVTKVALDINEKLAQTFKENIPESELIIGDIQDKA 394 Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83 I ++++ G PCQ FS G Sbjct: 395 IKEKIINLSKKNKVNMIIGGPPCQGFSLKG 424 >gi|254413051|ref|ZP_05026823.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196180215|gb|EDX75207.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 353 Score = 78.6 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 16/85 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLIFGDIAK 58 + DLF G GG+ L E E + TYQ N + TL Sbjct: 27 VIDLFAGCGGLALGFEAA----GFRTIGY-EKLADACTTYQHNLHGFCYQTTLARQ---- 77 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + DV++ G PCQPFS G Sbjct: 78 --PDLVDGADVIIGGPPCQPFSVGG 100 >gi|400287|sp|P31033|MTM4_NEIGO RecName: Full=Modification methylase NgoMIV; Short=M.NgoMIV; AltName: Full=Cytosine-specific methyltransferase NgoMIV Length = 312 Score = 78.6 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++ G GG L LE+ EI P + +T + N P+ +I GD+ + Sbjct: 3 FTSLEICAGAGGQALGLERA----GFSHVALIEIEPSACQTLRLNRPDWNVIEGDVRLFQ 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + D+L G PC PFS+AG Sbjct: 59 GEGYDGIDLLAGGVPCPPFSKAG 81 >gi|14601777|ref|NP_148318.1| cytosine-specific DNA methylase [Aeropyrum pernix K1] gi|5105700|dbj|BAA81012.1| cytosine-specific DNA methylase [Aeropyrum pernix K1] Length = 327 Score = 78.6 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 13/90 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 D+F G GG E+ + + P + +TY+ANFP+T I D+ ++ Sbjct: 5 YTAADVFAGGGGFSRGFEEA----GFRVRVAIDNYPPAARTYKANFPHTAFIADDVKEVG 60 Query: 61 TQDIP--------DHDVLLAGFPCQPFSQA 82 ++I + DV++A PC+PF+ A Sbjct: 61 LEEISSVSGLSPGEVDVVIASPPCEPFTGA 90 >gi|2522459|gb|AAC45757.1| M.BssHII methylase [Geobacillus stearothermophilus] Length = 375 Score = 78.6 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 12/94 (12%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAK 58 L LF G GG+ + EQ + +E + + + T + + +++ GDI++ Sbjct: 159 LTAFSLFSGAGGLDIGAEQATYKSMKIETLVTLDNWKDACDTLRGFYQGRTSVLQGDISE 218 Query: 59 IKTQDIPDH---------DVLLAGFPCQPFSQAG 83 I+ + H D++ G PCQ FSQAG Sbjct: 219 IQDPKLLWHQESQHDQIPDIVFGGPPCQAFSQAG 252 >gi|126465817|ref|YP_001040926.1| DNA-cytosine methyltransferase [Staphylothermus marinus F1] gi|126014640|gb|ABN70018.1| DNA-cytosine methyltransferase [Staphylothermus marinus F1] Length = 323 Score = 78.6 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 K DLFCG GG T + + +TY+ NFP+++ I DI +I+ Sbjct: 5 YKFIDLFCGAGGFAEGFILTNR---FRSVLGIDNFRPAAQTYKINFPDSIVIMEDIKRIR 61 Query: 61 TQDI------PDHDVLLAGFPCQPFSQA 82 D+ + DV++ PC+PF+ A Sbjct: 62 NDDLIEIIDPEEIDVVIGSPPCEPFTGA 89 >gi|291301680|ref|YP_003512958.1| C-5 cytosine-specific DNA methylase [Stackebrandtia nassauensis DSM 44728] gi|290570900|gb|ADD43865.1| C-5 cytosine-specific DNA methylase [Stackebrandtia nassauensis DSM 44728] Length = 329 Score = 78.6 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 +I L GIG + + E + ++ +P + + P+ GDI + Sbjct: 28 RIGSLCSGIGALD---DAVAAVTGAELAWVADTDPDAARVLTHRHPHAPNLGDIRTAPWE 84 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 D D+L+AG PCQP S+AG Sbjct: 85 DAEPVDILVAGVPCQPVSKAG 105 >gi|302782830|ref|XP_002973188.1| hypothetical protein SELMODRAFT_98974 [Selaginella moellendorffii] gi|300158941|gb|EFJ25562.1| hypothetical protein SELMODRAFT_98974 [Selaginella moellendorffii] Length = 334 Score = 78.6 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ + + GIGG+R LE+ V F EIN + Y+ NF + G+I ++ Sbjct: 4 LRVLEFYSGIGGLRFSLEEAKIDAMVVEVF--EINELANDVYERNFGHRPNQGNIQRLSV 61 Query: 62 QDIP--DHDVLLAGFPCQPFSQAG 83 D+ + D L PCQP+++ G Sbjct: 62 SDLDKYEADAWLLSPPCQPYTRQG 85 >gi|296114006|ref|YP_003627944.1| DNA-cytosine methyltransferase [Moraxella catarrhalis RH4] gi|295921700|gb|ADG62051.1| DNA-cytosine methyltransferase [Moraxella catarrhalis RH4] Length = 410 Score = 78.6 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +++ +F GIG I L++ + N F+++I+ + K+Y AN+ DI Sbjct: 36 IRLATVFSGIGAIEQALKRL--NLNHSIVFANDIDNFVKKSYLANYELDEKNWHSDITTF 93 Query: 60 KTQDIPD-HDVLLAGFPCQPFSQAG 83 + DVL+ G PCQ FS G Sbjct: 94 DATPYKNQVDVLVGGSPCQAFSMVG 118 >gi|46019864|emb|CAE52388.1| putative cytosine-specific methyltransferase [Streptococcus thermophilus] gi|312279225|gb|ADQ63882.1| Cytosine-specific methyltransferase [Streptococcus thermophilus ND03] Length = 515 Score = 78.6 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 28/103 (27%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLIFGD 55 DLFCG GG + Q + FSS+ +P + +TY D Sbjct: 5 IDLFCGAGGFSEGILQA----GFDILFSSDRSPMAQETYVNRHRQLGLEEGVDTHFELAD 60 Query: 56 IAKIKTQDI---------------PDHDVLLAGFPCQPFSQAG 83 I + ++ I D DV+ G PCQ FS+ G Sbjct: 61 IKDLTSERIFEVINNLRYGNIFEPGDIDVIFGGPPCQGFSRLG 103 >gi|157953001|ref|YP_001497893.1| hypothetical protein NY2A_B697R [Paramecium bursaria Chlorella virus NY2A] gi|155123228|gb|ABT15096.1| hypothetical protein NY2A_B697R [Paramecium bursaria Chlorella virus NY2A] Length = 369 Score = 78.6 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF GIGGI L + VE E N + + P +F D+ Sbjct: 3 LRALDLFSGIGGITHGLREI-----VEPIAFVEKNDEARSFLKKKHPEIPVFDDVCSFDA 57 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D++LAG+PC FS AG Sbjct: 58 TKWTHVDIILAGWPCTGFSNAG 79 >gi|255530843|ref|YP_003091215.1| DNA-cytosine methyltransferase [Pedobacter heparinus DSM 2366] gi|255343827|gb|ACU03153.1| DNA-cytosine methyltransferase [Pedobacter heparinus DSM 2366] Length = 474 Score = 78.3 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 13/88 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAKIK 60 D F G GG+ L + F ++ +++TY N N GDI K+ Sbjct: 94 FADFFSGAGGLSQGLINA----GFQPVFVNDNYTDALETYYFNHSLPLNQFYNGDIRKLV 149 Query: 61 TQD------IPDHDVLLAGFPCQPFSQA 82 ++ G PCQ FS A Sbjct: 150 ENFSQYKHLFKGVKIICGGPPCQGFSTA 177 >gi|309378580|emb|CBX22758.1| DNA cytosine methyltransferase M.NlaIV [Neisseria lactamica Y92-1009] Length = 380 Score = 78.3 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 25/43 (58%), Positives = 33/43 (76%) Query: 41 KTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + + N+P+ + +GDI KI+T DIPD D+LLAGFPCQ FS AG Sbjct: 2 EVLKQNYPDEVPYGDIPKIETGDIPDFDILLAGFPCQAFSFAG 44 >gi|145641419|ref|ZP_01796998.1| cytosine specific DNA methyltransferase (BSP6IM) [Haemophilus influenzae R3021] gi|145273962|gb|EDK13829.1| cytosine specific DNA methyltransferase (BSP6IM) [Haemophilus influenzae 22.4-21] Length = 298 Score = 78.3 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 37/57 (64%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +EC SE++ KTY+ F ++L GD+ ++ + +PD D+++AGFPCQ FS G Sbjct: 1 MECIAHSEVDLNPAKTYEIFFNDSLNLGDLTQLAPKSLPDFDLMIAGFPCQTFSIIG 57 >gi|297527509|ref|YP_003669533.1| DNA-cytosine methyltransferase [Staphylothermus hellenicus DSM 12710] gi|297256425|gb|ADI32634.1| DNA-cytosine methyltransferase [Staphylothermus hellenicus DSM 12710] Length = 323 Score = 78.3 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 K DLFCG GG T + + +TY+ NFP+++ + DI +I+ Sbjct: 5 YKFIDLFCGAGGFAEGFILTNR---FRSILGIDNFRPAAQTYKINFPDSIVVMEDIKRIR 61 Query: 61 TQDI------PDHDVLLAGFPCQPFSQA 82 D+ + DV++ PC+PF+ A Sbjct: 62 NDDLIEIVDPEEIDVVIGSPPCEPFTGA 89 >gi|311234076|gb|ADP86930.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1] Length = 489 Score = 78.3 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ + GI ++ +EI P+ +FPN GD I Sbjct: 3 MRYISICSGI----EAATVAWHPLGWHPVAFAEIEPFPCAVLAHHFPNVPNLGDFTTIVM 58 Query: 62 QDIPD-HDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS AG Sbjct: 59 EQYRGTVDLVVGGTPCQAFSVAG 81 >gi|281181375|dbj|BAI57705.1| cytosine specific DNA methyltransferase [Escherichia coli SE15] gi|315288374|gb|EFU47772.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 110-3] Length = 398 Score = 78.3 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIFGD 55 +K DLF G GG L T ++ + E + + TY+ N L+ D Sbjct: 1 MKAIDLFAGAGGFSLSAHNTGA---IDVVAAIEFDSAAANTYRKNMLERLEHKTELLQED 57 Query: 56 IAKIKTQDIP--------DHDVLLAGFPCQPFS 80 I + + + + D++L G PCQ FS Sbjct: 58 ILLVGPKKLRKKIKLKKGELDMILGGPPCQGFS 90 >gi|112983066|ref|NP_001036934.1| DNA cytosine-5 methyltransferase [Bombyx mori] gi|54888741|dbj|BAD67190.1| DNA cytosine-5 methyltransferase [Bombyx mori] Length = 336 Score = 78.3 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT 61 +I +L+ GIGG+ + + + +IN + Y+ NFP TL+F +I + Sbjct: 8 RILELYSGIGGMHCA--WNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTP 65 Query: 62 QDIP--DHDVLLAGFPCQPFSQAG 83 +I D +L PCQPF++ G Sbjct: 66 IEIEKYKIDTVLMSPPCQPFTRNG 89 >gi|167646223|ref|YP_001683886.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] gi|167348653|gb|ABZ71388.1| DNA-cytosine methyltransferase [Caulobacter sp. K31] Length = 387 Score = 78.3 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 8/86 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAK 58 M + F G G R L C F+++ + TYQ N+ L GD+ + Sbjct: 1 MPSFYEFFAGGGMARAGL-----GDEWTCLFANDFDAKKGMTYQRNWGADGELHIGDVKQ 55 Query: 59 IKTQDIP-DHDVLLAGFPCQPFSQAG 83 +KT+ + + D++ FPCQ S AG Sbjct: 56 VKTKQLRGEPDLVWGSFPCQDLSLAG 81 >gi|46579926|ref|YP_010734.1| type II DNA modification methyltransferase [Desulfovibrio vulgaris str. Hildenborough] gi|46449342|gb|AAS95993.1| type II DNA modification methyltransferase, putative [Desulfovibrio vulgaris str. Hildenborough] Length = 487 Score = 78.3 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ + GI ++ +EI P+ +FPN GD I Sbjct: 1 MRYISICSGI----EAATVAWHPLGWHPVAFAEIEPFPCAVLAHHFPNVPNLGDFTTIVM 56 Query: 62 QDIPD-HDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS AG Sbjct: 57 EQYRGTVDLVVGGTPCQAFSVAG 79 >gi|326573696|gb|EGE23654.1| DNA-cytosine methyltransferase [Moraxella catarrhalis O35E] Length = 408 Score = 78.3 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +++ +F GIG I L++ + N F+++I+ + K+Y AN+ DI Sbjct: 34 IRLATVFSGIGAIEQALKRL--NLNHSIVFANDIDNFVKKSYLANYELDEKNWHSDITTF 91 Query: 60 KTQDIPD-HDVLLAGFPCQPFSQAG 83 + D+L+ G PCQ FS G Sbjct: 92 DATPYKNQVDILVGGSPCQAFSMVG 116 >gi|123441984|ref|YP_001005967.1| prophage encoded DNA modification methylase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088945|emb|CAL11755.1| prophage encoded DNA modification methylase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 452 Score = 78.3 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 26/104 (25%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTL---- 51 + DLF G GG L L + + + E N + +T + N F + Sbjct: 1 MNFIDLFSGCGGFSLGLLKAGLTGRL----AVEKNQDAFETLKRNLIEGNKFSYSWASEK 56 Query: 52 ---IFGDIAKIKTQ---------DIPDHDVLLAGFPCQPFSQAG 83 DI + + D + D+++ G PCQ FS AG Sbjct: 57 ISLDNHDIHTLLDKYSSYLSELGDGREIDLVVGGPPCQGFSSAG 100 >gi|324516189|gb|ADY46452.1| tRNA (cytosine-5-)-methyltransferase [Ascaris suum] Length = 193 Score = 78.3 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 L+ +LF GIGG L+++ E + +IN + Y+ NFP T+ +I + Sbjct: 12 LRCLELFSGIGGFHYALKESGTR--FEMLAAFDINDVANAIYKHNFPCTTVHQCNIQALT 69 Query: 61 TQ--DIPDHDVLLAGFPCQPFSQAG 83 ++ D D+ PCQPF++ G Sbjct: 70 SEFYDRQCADLWTMSPPCQPFTKKG 94 >gi|74317828|ref|YP_315568.1| C-5 cytosine-specific DNA methylase [Thiobacillus denitrificans ATCC 25259] gi|74057323|gb|AAZ97763.1| C-5 cytosine-specific DNA methylase [Thiobacillus denitrificans ATCC 25259] Length = 382 Score = 78.3 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 7/85 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKI 59 M + F G G R L +C F+++ +P +Y N+ + L GD+ + Sbjct: 1 MPSFYEFFAGGGMARAGL-----GAEWDCLFANDFDPKKAASYAVNWDGDELRVGDVGTL 55 Query: 60 KTQDIP-DHDVLLAGFPCQPFSQAG 83 D+P D+ A FPCQ S AG Sbjct: 56 TVPDLPGRADLAWASFPCQDLSLAG 80 >gi|300775991|ref|ZP_07085850.1| possible DNA (cytosine-5-)-methyltransferase [Chryseobacterium gleum ATCC 35910] gi|300505124|gb|EFK36263.1| possible DNA (cytosine-5-)-methyltransferase [Chryseobacterium gleum ATCC 35910] Length = 415 Score = 78.3 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 22/98 (22%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---------FPNTLI-- 52 DLF G GG+ L L + F+ E NP + KT + N +P L Sbjct: 7 YIDLFAGCGGLSLGLHNAGWNG----LFAIEKNPDAFKTLEHNLINKKKHFDWPEWLPKK 62 Query: 53 FGDIAKI------KTQDIP-DHDVLLAGFPCQPFSQAG 83 DI + + + ++ G PCQ FS AG Sbjct: 63 NHDINSVLRTYKKNLKSLRGSVSLVAGGPPCQGFSMAG 100 >gi|9858807|gb|AAG01143.1|AF283660_1 BsrFI methylase [Geobacillus stearothermophilus] Length = 389 Score = 78.3 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 12/89 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY------QANFP-NTLIF 53 M+K+ LF G G + L + + +EI P +++ + N + + Sbjct: 1 MIKVASLFSGAGFLDLGF----TENGFDIVWGAEIVPEFARSHNYNMRLRYNHDIDRIHT 56 Query: 54 GDIAKIKTQDIP-DHDVLLAGFPCQPFSQ 81 DI + DIP + ++ G PCQ FS Sbjct: 57 VDIVNVSPMDIPQNIRGIIGGPPCQDFSI 85 >gi|148826164|ref|YP_001290917.1| modification methylase [Haemophilus influenzae PittEE] gi|148716324|gb|ABQ98534.1| modification methylase [Haemophilus influenzae PittEE] gi|162532590|gb|ABY16693.1| probable methylase [Haemophilus influenzae] gi|309973308|gb|ADO96509.1| Probable cytosine-specific DNA methyltransferase [Haemophilus influenzae R2846] Length = 409 Score = 78.3 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 +++ +F GIG I +++ N E F+ +I+P+ K+Y AN+ DI Sbjct: 35 IRLATVFSGIGAIEQAMKRL--KLNHEIIFAGDIDPHVKKSYLANYQLSEEHWHSDITTF 92 Query: 60 KTQDIPD-HDVLLAGFPCQPFSQAG 83 + D+L+ G PCQ FS G Sbjct: 93 DATPYREQIDLLVGGSPCQAFSMVG 117 >gi|148827577|ref|YP_001292330.1| hypothetical protein CGSHiGG_05020 [Haemophilus influenzae PittGG] gi|319775697|ref|YP_004138185.1| Cytosine-specific methyltransferase (pseudogene) [Haemophilus influenzae F3047] gi|319896763|ref|YP_004134957.1| cytosine-specific methyltransferase [Haemophilus influenzae F3031] gi|148718819|gb|ABQ99946.1| hypothetical protein CGSHiGG_05020 [Haemophilus influenzae PittGG] gi|317432266|emb|CBY80618.1| Cytosine-specific methyltransferase [Haemophilus influenzae F3031] gi|317450288|emb|CBY86504.1| Cytosine-specific methyltransferase (pseudogene) [Haemophilus influenzae F3047] Length = 424 Score = 78.3 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M + GI + + + + SEI P+ ++PN GD+ + Sbjct: 1 MFTYGSICSGI----EAVSVAWKGLG-KPLWFSEIEPFPCAVLTYHYPNIPNLGDMTTLP 55 Query: 61 TQ----DIPDHDVLLAGFPCQPFSQAG 83 + +IP DVL+ G PCQ FS AG Sbjct: 56 EKILNREIPAPDVLVGGTPCQAFSIAG 82 >gi|170719133|ref|YP_001784281.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] gi|168827262|gb|ACA32633.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] Length = 408 Score = 77.9 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 5/79 (6%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKIKTQDIP 65 F GIG I ++ N F+ +I+P+ K+Y AN+ DI Sbjct: 40 FSGIGAIEQAFKRL--ELNHCIVFAGDIDPHVKKSYLANYDLSEEHWHSDITTFDAIPYR 97 Query: 66 D-HDVLLAGFPCQPFSQAG 83 D D+L+ G PCQ FS G Sbjct: 98 DQVDILVGGSPCQAFSMVG 116 >gi|317010333|gb|ADU84080.1| cytosine specific DNA methyltransferase [Helicobacter pylori SouthAfrica7] Length = 361 Score = 77.9 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPNTL-IFGDIA 57 KI DLFCG GG LE+ ++C + ++ T++ N N + I GDI Sbjct: 3 YKILDLFCGAGGFSAGLERLKEFSALIGLDC------DKQALNTFENNHKNAVGICGDIT 56 Query: 58 K--IKTQDIP-----DHDVLLAGFPCQPFSQAG 83 + IK + I + ++++ G PCQ FS G Sbjct: 57 QAGIKEKVIELAKKLEINMIIGGPPCQGFSNKG 89 >gi|167630968|ref|YP_001681467.1| DNA-cytosine methyltransferase [Heliobacterium modesticaldum Ice1] gi|167593708|gb|ABZ85456.1| DNA-cytosine methyltransferase [Heliobacterium modesticaldum Ice1] Length = 667 Score = 77.9 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF G GG L + ++SEI P+ ++ P +GDI+ I Sbjct: 5 LTLGSLFDGSGGFPLGA----VLNGITPVWASEIEPFPIRVTTRRLPQMKHYGDISCING 60 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +I D++ G PC S AG Sbjct: 61 TEIEPVDIISFGSPCTDMSVAG 82 >gi|303236368|ref|ZP_07322958.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] gi|302483426|gb|EFL46431.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] Length = 357 Score = 77.9 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 I DLFCG GG+ E+ + +I ++ T++ N + D++ + Sbjct: 7 YNIIDLFCGCGGLSKGFEEA----GYKTLLGVDIEQNALNTFEKNHNGAVGLNLDLSASE 62 Query: 61 TQDIPD-------HDVLLAGFPCQPFSQAG 83 + D D DV++ G PCQ FS G Sbjct: 63 SFDKIDEVVKGRAIDVIIGGPPCQGFSLTG 92 >gi|269941524|emb|CBI49922.1| phage C-5 cytosine-specific DNA methylase [Staphylococcus aureus subsp. aureus TW20] Length = 332 Score = 77.9 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAK 58 M+K+ +LF G+G + L E SE + + + N + GD+ Sbjct: 1 MIKVLELFSGVGSFSISLNTLGIEH--EIVGFSETRKTATQLFCKLHNKKESENLGDVRN 58 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + +D+ D D+L+ G PCQ F++AG Sbjct: 59 VSAKDL-DVDLLVFGSPCQSFTRAG 82 >gi|261339110|ref|ZP_05966968.1| hypothetical protein ENTCAN_05324 [Enterobacter cancerogenus ATCC 35316] gi|288318947|gb|EFC57885.1| modification methylase HgiDII [Enterobacter cancerogenus ATCC 35316] Length = 355 Score = 77.9 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 13/89 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59 M K DLFCG GG+ L+Q N E + E N + +T++AN +F DI I Sbjct: 1 MFKAIDLFCGGGGLTEGLKQA----NFEVISAVENNISAAETFKANNRKCHLFQEDIRFI 56 Query: 60 KTQDIPD--------HDVLLAGFPCQPFS 80 +Q+I D +L PCQ FS Sbjct: 57 SSQEIMDKVGIKSGELSLLAGCPPCQGFS 85 >gi|167630879|ref|YP_001681378.1| DNA-cytosine methyltransferase [Heliobacterium modesticaldum Ice1] gi|167593619|gb|ABZ85367.1| DNA-cytosine methyltransferase [Heliobacterium modesticaldum Ice1] Length = 319 Score = 77.9 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M ++ G GG L LE E EI T + N P +I D+ Sbjct: 3 MFTSVEICAGAGGQALGLEMA----GFEHVALVEIEKEYCTTLKLNRPKWNVINEDVRLF 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 D+L G PC PFS AG Sbjct: 59 DGNAYRGIDLLAGGVPCPPFSVAG 82 >gi|194098495|ref|YP_002001557.1| DNA modification methylase [Neisseria gonorrhoeae NCCP11945] gi|239998889|ref|ZP_04718813.1| DNA modification methylase [Neisseria gonorrhoeae 35/02] gi|240115566|ref|ZP_04729628.1| DNA modification methylase [Neisseria gonorrhoeae PID18] gi|240125661|ref|ZP_04738547.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679] gi|254493672|ref|ZP_05106843.1| DNA modification methylase [Neisseria gonorrhoeae 1291] gi|260440624|ref|ZP_05794440.1| DNA modification methylase [Neisseria gonorrhoeae DGI2] gi|268594728|ref|ZP_06128895.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae 35/02] gi|268601236|ref|ZP_06135403.1| DNA modification methylase [Neisseria gonorrhoeae PID18] gi|268684247|ref|ZP_06151109.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679] gi|291043935|ref|ZP_06569651.1| DNA modification methylase [Neisseria gonorrhoeae DGI2] gi|193933785|gb|ACF29609.1| DNA modification methylase [Neisseria gonorrhoeae NCCP11945] gi|226512712|gb|EEH62057.1| DNA modification methylase [Neisseria gonorrhoeae 1291] gi|268548117|gb|EEZ43535.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae 35/02] gi|268585367|gb|EEZ50043.1| DNA modification methylase [Neisseria gonorrhoeae PID18] gi|268624531|gb|EEZ56931.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679] gi|291012398|gb|EFE04387.1| DNA modification methylase [Neisseria gonorrhoeae DGI2] gi|317164179|gb|ADV07720.1| DNA modification methylase [Neisseria gonorrhoeae TCDC-NG08107] Length = 312 Score = 77.9 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++ G GG L LE+ EI P + +T + N P+ +I GD+ + Sbjct: 3 FTSLEICAGAGGQALGLERA----GFSHVALIEIEPSACQTLRLNRPDWNVIEGDVRLFQ 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + D+L G PC PFS+AG Sbjct: 59 GEGYDGIDLLAGGVPCPPFSKAG 81 >gi|238059022|ref|ZP_04603734.1| DNA-cytosine methyltransferase [Micromonospora sp. ATCC 39149] gi|237886458|gb|EEP75286.1| DNA-cytosine methyltransferase [Micromonospora sp. ATCC 39149] Length = 442 Score = 77.9 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 18/88 (20%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + DLF G GG+ +Q E +S+I+P + T+ NFP I GDI + + Sbjct: 1 MLDLFAGAGGLSQGFQQA----GFEIAGASDIDPDACATFALNFPGAQAICGDIRRPELH 56 Query: 63 DIPDHDVL---------LAGFPCQPFSQ 81 + ++ + G PCQ FSQ Sbjct: 57 E----HIIEVGRGVDVVVGGPPCQAFSQ 80 >gi|157952392|ref|YP_001497284.1| hypothetical protein NY2A_B088L [Paramecium bursaria Chlorella virus NY2A] gi|155122619|gb|ABT14487.1| hypothetical protein NY2A_B088L [Paramecium bursaria Chlorella virus NY2A] Length = 343 Score = 77.9 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML+ DLF GIGG L ++ E + FP+ IF D+ Sbjct: 4 MLRSLDLFSGIGGNSYALRDI-----LKPVAYVEREQHLRDFLGRKFPDVPIFDDVVTFD 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 T+ + D D++ AGFPC FS AG Sbjct: 59 TRSVKDIDIITAGFPCTGFSTAG 81 >gi|240142254|ref|YP_002966764.1| putative site-specific DNA-methyltransferase [Methylobacterium extorquens AM1] gi|240012198|gb|ACS43423.1| putative site-specific DNA-methyltransferase [Methylobacterium extorquens AM1] Length = 384 Score = 77.9 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ LF G G + LE + EC E++ + + + FP + D++ + Sbjct: 1 MRTIGLFSGSGSLEAGLEAGGH----ECLMLCEVSEPARRVLASRFPGVPVAHDVSDL-- 54 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +P D+L AGFPCQ S +G Sbjct: 55 ARLPSCDLLAAGFPCQDLSLSG 76 >gi|59801274|ref|YP_207986.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA 1090] gi|240014199|ref|ZP_04721112.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae DGI18] gi|240016634|ref|ZP_04723174.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA6140] gi|240080823|ref|ZP_04725366.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA19] gi|240112810|ref|ZP_04727300.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae MS11] gi|240117858|ref|ZP_04731920.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae PID1] gi|240121762|ref|ZP_04734724.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae PID24-1] gi|240123416|ref|ZP_04736372.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae PID332] gi|240128118|ref|ZP_04740779.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae SK-93-1035] gi|268596944|ref|ZP_06131111.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA19] gi|268598881|ref|ZP_06133048.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae MS11] gi|268603557|ref|ZP_06137724.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae PID1] gi|268682037|ref|ZP_06148899.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae PID332] gi|268686505|ref|ZP_06153367.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|293399137|ref|ZP_06643302.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] gi|5051442|emb|CAB44950.1| DNA modification methylase [Neisseria gonorrhoeae] gi|5262959|emb|CAB45015.2| DNA modification methylase [Neisseria gonorrhoeae] gi|59718169|gb|AAW89574.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA 1090] gi|268550732|gb|EEZ45751.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA19] gi|268583012|gb|EEZ47688.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae MS11] gi|268587688|gb|EEZ52364.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae PID1] gi|268622321|gb|EEZ54721.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae PID332] gi|268626789|gb|EEZ59189.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|291610551|gb|EFF39661.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62] Length = 312 Score = 77.9 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++ G GG L LE+ EI P + +T + N P+ +I GD+ + Sbjct: 3 FTSLEICAGAGGQALGLERA----GFSHVALIEIEPSACQTLRLNRPDWNVIEGDVRLFQ 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + D+L G PC PFS+AG Sbjct: 59 GEGYDGIDLLAGGVPCPPFSKAG 81 >gi|125974253|ref|YP_001038163.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC 27405] gi|125714478|gb|ABN52970.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC 27405] Length = 350 Score = 77.9 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 9/91 (9%) Query: 2 LKI--TDLFCGIGGIRLDLEQT-FNHRNVECF--FSSEINPYSVKTYQANF----PNTLI 52 +K +LFCG GG+ + ++ ++++ + + TY N P ++I Sbjct: 1 MKFELGELFCGPGGLAYGAKTAEIENKEYRIIHKWANDYDRDTCDTYIHNICPDNPESVI 60 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D+ K+ + D L GFPC FS G Sbjct: 61 CQDVRKLNIDSLQPIDALAFGFPCNDFSVVG 91 >gi|168036438|ref|XP_001770714.1| predicted protein [Physcomitrella patens subsp. patens] gi|162678075|gb|EDQ64538.1| predicted protein [Physcomitrella patens subsp. patens] Length = 364 Score = 77.9 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ + + GIGG+R L++ + +IN + Y+ NF + +I ++ Sbjct: 8 MRVLEFYSGIGGLRYSLQEAGVEAV--VVEAFDINEVANDVYEHNFGHRPSQRNIQRLTV 65 Query: 62 QDIP--DHDVLLAGFPCQPFSQAG 83 + D + PCQP+++ G Sbjct: 66 SQLDAYKADTWIMSPPCQPYTRQG 89 >gi|161869767|ref|YP_001598934.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis 053442] gi|161595320|gb|ABX72980.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis 053442] Length = 411 Score = 77.9 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIA 57 +++ +F GIG +EQ F+ + N F+ +I+PY K+Y N+ DI Sbjct: 38 IRLATVFSGIG----AVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDIT 93 Query: 58 KIKTQDIPD-HDVLLAGFPCQPFSQAG 83 + + D+L+ G PCQ FS G Sbjct: 94 QFDASKFRNQVDILVGGSPCQAFSMVG 120 >gi|17548155|ref|NP_521557.1| DNA modification cytosine-specific methyltransferase [Ralstonia solanacearum GMI1000] gi|17430462|emb|CAD16935.1| probable site-specific dna methylase protein [Ralstonia solanacearum GMI1000] Length = 364 Score = 77.9 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 13/88 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKIKT 61 + LFCG GG+ EQ E + +I P S+++Y N P DI IK Sbjct: 2 LLSLFCGAGGLDKGFEQA----GFEVGLAFDIRPDSIESYNRNRRAPIRGYCRDIRDIKP 57 Query: 62 QDIPDH-------DVLLAGFPCQPFSQA 82 + + + ++ G PCQ FS+A Sbjct: 58 KALDELFGETFRPSGIIGGPPCQSFSRA 85 >gi|218767941|ref|YP_002342453.1| putative modification methylase [Neisseria meningitidis Z2491] gi|6900408|emb|CAB72018.1| putative cytosine-specific methyltransferase [Neisseria meningitidis] gi|121051949|emb|CAM08255.1| putative modification methylase [Neisseria meningitidis Z2491] Length = 411 Score = 77.5 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIA 57 +++ +F GIG +EQ F+ + N F+ +I+PY K+Y N+ DI Sbjct: 38 IRLATVFSGIG----AVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDIT 93 Query: 58 KIKTQDIPD-HDVLLAGFPCQPFSQAG 83 + + D+L+ G PCQ FS G Sbjct: 94 QFDASKFRNQVDILVGGSPCQAFSMVG 120 >gi|167031542|ref|YP_001666773.1| DNA-cytosine methyltransferase [Pseudomonas putida GB-1] gi|166858030|gb|ABY96437.1| DNA-cytosine methyltransferase [Pseudomonas putida GB-1] Length = 377 Score = 77.5 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 11/87 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQ 62 + DLF G GG+ L E + +++ Y NFP I D+A + Sbjct: 8 VIDLFSGCGGLGLGAELA----GFHSLAAVDVDKDLQSAYSLNFPLTQTINTDLALVTPS 63 Query: 63 DI------PDHDVLLAGFPCQPFSQAG 83 D ++ G PCQ FS+ G Sbjct: 64 MWKGILKGKRIDGIIGGPPCQGFSRIG 90 >gi|254368945|ref|ZP_04984958.1| predicted protein [Francisella tularensis subsp. holarctica FSC022] gi|157121866|gb|EDO66036.1| predicted protein [Francisella tularensis subsp. holarctica FSC022] Length = 69 Score = 77.5 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI 59 ++K+ F G GG+ L E+ + +++E + +TY+ N PNT++ I I Sbjct: 4 IMKVVSFFSGAGGLDLGFERA----GFDIIWANEFDKEIWETYEKNHPNTILDRRSIVNI 59 Query: 60 KTQDI 64 + Sbjct: 60 HESEF 64 >gi|167043721|gb|ABZ08413.1| putative C-5 cytosine-specific DNA methylase [uncultured marine crenarchaeote HF4000_APKG3B16] Length = 377 Score = 77.5 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 14/89 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--------TLIFG 54 + L+ G GG L + E + ++ N + T + NF + G Sbjct: 5 TLISLYSGCGGSALGFQNA----GFEITYMNDNNADACYTLKENFEKPSANPDRQVVHRG 60 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ + D++ GFPCQ FS AG Sbjct: 61 NVKDV--FQFGSADIIEGGFPCQGFSLAG 87 >gi|17225517|gb|AAL37447.1|AF328915_1 cytosine-specific DNA methyltransferase [Helicobacter pylori] Length = 361 Score = 77.5 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPN-TLIFGDIA 57 KI DLFCG GG LE ++C + ++ T++ N N T I GDI Sbjct: 3 YKILDLFCGAGGFSAGLECLKEFDALIGLDC------DKQALITFENNHKNATGICGDIT 56 Query: 58 KIKTQD-------IPDHDVLLAGFPCQPFSQAG 83 +I+ ++ + ++++ G PCQ FS G Sbjct: 57 QIEIKEKVIKLAQTLEINMIIGGPPCQGFSNKG 89 >gi|150396423|ref|YP_001326890.1| DNA-cytosine methyltransferase [Sinorhizobium medicae WSM419] gi|150027938|gb|ABR60055.1| DNA-cytosine methyltransferase [Sinorhizobium medicae WSM419] Length = 632 Score = 77.5 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L + ++ G GG+ L LE+ E E + ++ T + N + T+I D+ + Sbjct: 280 LTVVEICAGAGGMSLGLERA----GFEHVALVEYDNHAAATLRRNRRDWTVIREDVRTMD 335 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 + + D++ G PCQP+S G Sbjct: 336 FRLYRQLEIDLVSGGPPCQPYSSDG 360 >gi|329113622|ref|ZP_08242401.1| Modification methylase HpaII [Acetobacter pomorum DM001] gi|326697068|gb|EGE48730.1| Modification methylase HpaII [Acetobacter pomorum DM001] Length = 389 Score = 77.5 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 8/83 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAK 58 M + F G G R L C F+++ + +YQAN+ L GD+ Sbjct: 8 MPSFYEFFAGGGMARAGL-----GDGWTCLFANDFDHKKGLSYQANWGTGGELRVGDVND 62 Query: 59 IKTQDIPDH-DVLLAGFPCQPFS 80 ++ +D+P D++ FPCQ S Sbjct: 63 VRVEDLPGVADLVWGSFPCQDLS 85 >gi|303245411|ref|ZP_07331695.1| DNA-cytosine methyltransferase [Desulfovibrio fructosovorans JJ] gi|302493260|gb|EFL53122.1| DNA-cytosine methyltransferase [Desulfovibrio fructosovorans JJ] Length = 490 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 23/100 (23%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PN--------TLIF 53 ++ DLF G GGI L E + E++P + ++ NF P+ Sbjct: 19 RVLDLFAGCGGISLGFRTA----GYELRAAIEMDPVAAASHALNFYPDLEGEDKKRHAQS 74 Query: 54 GDIAKIKTQDI------PD----HDVLLAGFPCQPFSQAG 83 DI K + P+ DV++ G PCQ F++ G Sbjct: 75 RDIVKTEPHSFMLEMGCPEPEEAIDVVVGGPPCQAFARVG 114 >gi|261837515|gb|ACX97281.1| cytosine-methyltransferase [Helicobacter pylori 51] Length = 355 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPN-TLIFGDIA 57 KI DLFCG GG LE ++C + ++ T++ N N T + GDI Sbjct: 3 YKILDLFCGAGGFSAGLECLKEFDALIGLDC------DKQALITFENNHKNATGVCGDIT 56 Query: 58 KIKTQD-------IPDHDVLLAGFPCQPFSQAG 83 +I+ ++ + ++++ G PCQ FS G Sbjct: 57 QIEIKEKVIKLAQTLEINMIIGGPPCQGFSNKG 89 >gi|22091184|ref|NP_665998.1| M.PhiCh1-II [Natrialba phage PhiCh1] gi|289594296|ref|YP_003482303.1| DNA-cytosine methyltransferase [Natrialba magadii ATCC 43099] gi|22003505|gb|AAM88754.1|AF440695_80 putative C5-cytosine methyltransferase [Natrialba phage PhiCh1] gi|289533393|gb|ADD07741.1| DNA-cytosine methyltransferase [Natrialba magadii ATCC 43099] Length = 283 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 23/100 (23%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----------PNTL 51 LF GIGG L + + + E N + TY+AN P L Sbjct: 30 THVSLFSGIGGFDLGFSRA----GFKNLVAVEANQDAADTYRANLINDCENYGQDEPPVL 85 Query: 52 IFGDIAKIKTQDIPDH--------DVLLAGFPCQPFSQAG 83 + DI K+ T +I + + G PCQ FS G Sbjct: 86 MERDITKVATWEILEAAGIGVGQLTAVSGGPPCQGFSHIG 125 >gi|315650253|ref|ZP_07903326.1| modification methylase BbvI [Eubacterium saburreum DSM 3986] gi|315487498|gb|EFU77807.1| modification methylase BbvI [Eubacterium saburreum DSM 3986] Length = 349 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 7/90 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTF-NHRNVECF--FSSEINPYSVKTYQANF----PNTLIF 53 + ++ +LFCG GGI N+ N ++++ + + KTY+ N P T+ Sbjct: 2 IFRLGELFCGPGGIGWGAINASINNPNYRIIHQWANDYDESTCKTYRYNICPNAPETVYH 61 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI + D L GFPC +S G Sbjct: 62 ADIRTFDMSQLAPIDALAFGFPCNDYSVVG 91 >gi|329122250|ref|ZP_08250838.1| DNA (cytosine-5-)-methyltransferase [Haemophilus aegyptius ATCC 11116] gi|327473811|gb|EGF19228.1| DNA (cytosine-5-)-methyltransferase [Haemophilus aegyptius ATCC 11116] Length = 387 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M + GI + + + + + SEI P+ ++PN GD+ + Sbjct: 1 MFTYGSICSGI----EAVSVAWKGLS-KPLWFSEIEPFPCAVLAYHYPNIPNLGDMTTLP 55 Query: 61 TQ----DIPDHDVLLAGFPCQPFSQAG 83 + +IP DVL+ G PCQ FS AG Sbjct: 56 EKILNREIPAPDVLVGGTPCQAFSVAG 82 >gi|317179558|dbj|BAJ57346.1| cytosine specific DNA methyltransferase [Helicobacter pylori F30] Length = 355 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPN-TLIFGDIA 57 KI DLFCG GG LE ++C + ++ T++ N N T + GDI Sbjct: 3 YKILDLFCGAGGFSAGLECLKEFDALIGLDC------DKQALITFENNHKNATGVCGDIT 56 Query: 58 KIKTQD-------IPDHDVLLAGFPCQPFSQAG 83 +I+ ++ + ++++ G PCQ FS G Sbjct: 57 QIEIKEKVIKLAQTLEINMIIGGPPCQGFSNKG 89 >gi|145630454|ref|ZP_01786235.1| modification methylase Bsp6I-like protein [Haemophilus influenzae R3021] gi|144984189|gb|EDJ91626.1| modification methylase Bsp6I-like protein [Haemophilus influenzae R3021] Length = 362 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M + GI + + + + + SEI P+ ++PN GD+ + Sbjct: 123 MFTYGSICSGI----EAVSVAWKGLS-KPLWFSEIEPFPCAVLAYHYPNIPNLGDMTTLP 177 Query: 61 TQ----DIPDHDVLLAGFPCQPFSQAG 83 + +IP DVL+ G PCQ FS AG Sbjct: 178 EKILNREIPAPDVLVGGTPCQAFSVAG 204 >gi|68249848|ref|YP_248960.1| modification methylase Bsp6I-like [Haemophilus influenzae 86-028NP] gi|68058047|gb|AAX88300.1| modification methylase Bsp6I-like [Haemophilus influenzae 86-028NP] Length = 387 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M + GI + + + + + SEI P+ ++PN GD+ + Sbjct: 1 MFTYGSICSGI----EAVSVAWKGLS-KPLWFSEIEPFPCAVLAYHYPNIPNLGDMTTLP 55 Query: 61 TQ----DIPDHDVLLAGFPCQPFSQAG 83 + +IP DVL+ G PCQ FS AG Sbjct: 56 EKILNREIPAPDVLVGGTPCQAFSVAG 82 >gi|77412067|ref|ZP_00788393.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae CJB111] gi|77161872|gb|EAO72857.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae CJB111] Length = 394 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 27 VECFFSSEINPYSVKTYQANFP--NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + C E + ++ K+Y+A + DI I +P D+ AG PCQ S AG Sbjct: 1 MTCLGYCEKDKFARKSYEAMYDTEGEWFHDDITSIDPTRLPKADLWTAGSPCQNVSIAG 59 >gi|308062920|gb|ADO04807.1| cytosine specific DNA methyltransferase [Helicobacter pylori Sat464] Length = 355 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPNTL-IFGDIA 57 KI DLFCG GG LE ++C + ++ T++ N N + I GDI Sbjct: 3 YKILDLFCGAGGFSAGLECLKEFDALIGLDC------DKQALITFENNHKNAIGICGDIT 56 Query: 58 KIKTQD-------IPDHDVLLAGFPCQPFSQAG 83 +I+ ++ + ++++ G PCQ FS G Sbjct: 57 QIEIKEKVIKLAQTLEINMIIGGPPCQGFSNKG 89 >gi|268611949|ref|ZP_06145676.1| DNA-cytosine methyltransferase [Ruminococcus flavefaciens FD-1] Length = 352 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GI L L++ VEC+ + EI+ Y+V + NFP + G++ Sbjct: 1 MKVLSLFDGISCGMLALQRAG--IPVECYDAFEIDKYAVTVSKRNFPVIVHHGNVYDGDF 58 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 +D+LL G PC +S A Sbjct: 59 TQFRGYDLLLGGSPCTYWSIA 79 >gi|121634611|ref|YP_974856.1| putative modification methylase [Neisseria meningitidis FAM18] gi|4887086|gb|AAD32180.1|AF125564_2 putative site specific DNA methyltransferase [Neisseria meningitidis] gi|120866317|emb|CAM10058.1| putative modification methylase [Neisseria meningitidis FAM18] gi|325132026|gb|EGC54724.1| DNA-cytosine methyltransferase [Neisseria meningitidis M6190] gi|325135954|gb|EGC58564.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579] gi|325137780|gb|EGC60355.1| DNA-cytosine methyltransferase [Neisseria meningitidis ES14902] gi|325142075|gb|EGC64502.1| DNA-cytosine methyltransferase [Neisseria meningitidis 961-5945] gi|325198036|gb|ADY93492.1| DNA-cytosine methyltransferase [Neisseria meningitidis G2136] gi|325202381|gb|ADY97835.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149] gi|325207867|gb|ADZ03319.1| DNA-cytosine methyltransferase [Neisseria meningitidis NZ-05/33] Length = 411 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIA 57 +++ +F GIG +EQ F+ + N F+ +I+PY K+Y N+ DI Sbjct: 38 IRLATVFSGIG----AVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDIT 93 Query: 58 KIKTQDIPD-HDVLLAGFPCQPFSQAG 83 + + + D+L+ G PCQ FS G Sbjct: 94 QFDARKFRNQVDILVGGSPCQAFSMVG 120 >gi|119382891|ref|YP_913947.1| transposase IS116/IS110/IS902 family protein [Paracoccus denitrificans PD1222] gi|119372658|gb|ABL68251.1| transposase IS116/IS110/IS902 family protein [Paracoccus denitrificans PD1222] Length = 539 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 10/85 (11%) Query: 4 ITDLFCGI-GGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + DLF G GG L L + + EI + Y NFP+ ++ DI + Sbjct: 14 VLDLFSGAAGGWSLGLHRA----GFMTIAACEIVEWRRILYSENFPHVRLYADIRDLTAT 69 Query: 63 DIPD-----HDVLLAGFPCQPFSQA 82 + D+++ PCQ S A Sbjct: 70 RLVSDLGCLPDIVVGSPPCQDISSA 94 >gi|169825537|ref|YP_001695712.1| modification methylase [Lysinibacillus sphaericus C3-41] gi|168994814|gb|ACA42353.1| Modification methylase [Lysinibacillus sphaericus C3-41] Length = 296 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDH 67 F G GG+ L + + ++ S EI+ + T + NF + + DI KI D D Sbjct: 19 FSGAGGLDLGIIEA----GIDVIESFEIDKKACNTLRNNFKHIINETDITKITVLDQQDA 74 Query: 68 DVLLAGFPCQPFS 80 DV + FPC +S Sbjct: 75 DVYIGTFPCTKYS 87 >gi|304387865|ref|ZP_07370039.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|254670653|emb|CBA06706.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha153] gi|254672637|emb|CBA06420.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha275] gi|261392815|emb|CAX50396.1| putative type II restriction-modification system enzyme Mod [Neisseria meningitidis 8013] gi|304338130|gb|EFM04266.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|319410190|emb|CBY90526.1| putative type II restriction-modification system enzyme Mod [Neisseria meningitidis WUE 2594] gi|325134031|gb|EGC56686.1| DNA-cytosine methyltransferase [Neisseria meningitidis M13399] gi|325203903|gb|ADY99356.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240355] Length = 411 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIA 57 +++ +F GIG +EQ F+ + N F+ +I+PY K+Y N+ DI Sbjct: 38 IRLATVFSGIG----AVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDIT 93 Query: 58 KIKTQDIPD-HDVLLAGFPCQPFSQAG 83 + + + D+L+ G PCQ FS G Sbjct: 94 QFDARKFRNQVDILVGGSPCQAFSMVG 120 >gi|288919493|ref|ZP_06413824.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f] gi|288349096|gb|EFC83342.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f] Length = 640 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 11/86 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK-IKTQD 63 DLF G GG+ L LEQ + + N +V+T++ANF + D+++ + Sbjct: 44 VDLFSGAGGLSLGLEQA----GWTVVTAVDDNLRAVETHRANFRGRAVQLDLSEPAARNE 99 Query: 64 IP------DHDVLLAGFPCQPFSQAG 83 + D++ G PCQP+S+AG Sbjct: 100 LLASLAGVKIDLVAGGPPCQPYSRAG 125 >gi|221120982|ref|XP_002166687.1| PREDICTED: similar to TRNA aspartic acid methyltransferase 1 [Hydra magnipapillata] Length = 388 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 LK+ + + GIGG+ L +VE F EIN + Y+ NFP TL+ +I + Sbjct: 5 LKVLEFYSGIGGVHYALTYAGVSVHVEAAF--EINTSANSVYRHNFPQTTLLQKNIEGLN 62 Query: 61 TQDIPDH--DVLLAGFPCQPFSQAG 83 +D+ DV PCQP+++ G Sbjct: 63 LEDLEHFNADVWTMSPPCQPYTRLG 87 >gi|167009508|ref|ZP_02274439.1| modification methylase HaeIII [Francisella tularensis subsp. holarctica FSC200] Length = 65 Score = 77.5 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 +K+ F G GG+ L E+ + +++E + +TY+ N PNT++ I I Sbjct: 1 MKVVSFFSGAGGLDLGFERA----GFDIIWANEFDKEIWETYEKNHPNTILDRRSIVNIH 56 Query: 61 TQDI 64 + Sbjct: 57 ESEF 60 >gi|291299135|ref|YP_003510413.1| DNA-cytosine methyltransferase [Stackebrandtia nassauensis DSM 44728] gi|290568355|gb|ADD41320.1| DNA-cytosine methyltransferase [Stackebrandtia nassauensis DSM 44728] Length = 437 Score = 77.1 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 25/98 (25%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----------------F 47 +LF G GG L + + +E + +T +AN + Sbjct: 15 VELFAGAGG----LAMSVHAAGFRPLLVNEFAKRACETLRANGAVDRGDDLSVPDPGGPW 70 Query: 48 PNTLIFGDIAKIKTQDIPD--HDVLLAGFPCQPFSQAG 83 P L+ GD+ ++K + + + DVL G PCQPFS G Sbjct: 71 P--LVEGDVRQVKFEYLAEAGVDVLAGGPPCQPFSLGG 106 >gi|291544930|emb|CBL18039.1| Site-specific DNA methylase [Ruminococcus sp. 18P13] Length = 362 Score = 77.1 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ LF GI L L++ VEC+ + EI+ Y+V + NFP + G++ Sbjct: 1 MKVLSLFDGISCGMLALQRAG--IPVECYDAFEIDKYAVTVSKRNFPVIVHHGNVYDGDF 58 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 +D+LL G PC +S A Sbjct: 59 TQFKGYDLLLGGSPCTYWSIA 79 >gi|332970699|gb|EGK09680.1| modification methylase HphIA [Kingella kingae ATCC 23330] Length = 149 Score = 77.1 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 11/88 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61 + DLFCG GG+ L Q + + ++KTY A NT I D+ Sbjct: 6 TVLDLFCGCGGLSLGFIQA----GFDVKLGIDAWQDAIKTYTATHQNTQGIVADLFTTTP 61 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + I DV++ G PCQ FS AG Sbjct: 62 EQISQQTQINQIDVIIGGPPCQGFSIAG 89 >gi|255640237|gb|ACU20409.1| unknown [Glycine max] Length = 385 Score = 77.1 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ + + GIGG+R L + N + + EIN + YQ NF + G+I + Sbjct: 13 RVLEFYSGIGGMRYSLMKA--QVNAQVVQAFEINDTANDVYQHNFGHRPYQGNIQCLTAA 70 Query: 63 DIPD--HDVLLAGFPCQPFSQAG 83 D+ D L PCQP+++ G Sbjct: 71 DLDKYGADAWLLSPPCQPYTRQG 93 >gi|254804928|ref|YP_003083149.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|254668470|emb|CBA05754.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] Length = 312 Score = 77.1 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++ G GG L LE+ EI P + +T + N P+ +I GD+ + Sbjct: 3 FTSLEICAGAGGQALGLERA----GFSHVALIEIEPSACQTLRLNRPDWNVIEGDVRLFQ 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + D+L G PC PFS+AG Sbjct: 59 GKGYDGIDLLAGGVPCPPFSKAG 81 >gi|315636653|ref|ZP_07891886.1| modification methylase Eco47II [Arcobacter butzleri JV22] gi|315479079|gb|EFU69779.1| modification methylase Eco47II [Arcobacter butzleri JV22] Length = 411 Score = 77.1 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 23 NHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFS 80 +E +EI+ Y+V+T + N P+ + D++KI D+L GFPCQ FS Sbjct: 90 EKAGIEHILLNEIDKYAVQTLKRNRPHWKIEHSDVSKIDFTSYKNKIDLLTGGFPCQAFS 149 Query: 81 QAG 83 AG Sbjct: 150 YAG 152 >gi|156741374|ref|YP_001431503.1| DNA-cytosine methyltransferase [Roseiflexus castenholzii DSM 13941] gi|156232702|gb|ABU57485.1| DNA-cytosine methyltransferase [Roseiflexus castenholzii DSM 13941] Length = 387 Score = 77.1 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 8/85 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 L + F G G R+ L C F+++I+P Y+ NF L+ DI ++ Sbjct: 4 LTFYEFFAGGGLARIGL-----GPQWTCLFANDIDPKKADVYRRNFSGAPELVVADIHRV 58 Query: 60 KTQDIPDHDVL-LAGFPCQPFSQAG 83 T +P +L A FPCQ S AG Sbjct: 59 TTDMLPGRALLAWASFPCQDLSLAG 83 >gi|34451612|gb|AAQ72361.1| BsaWI methylase [Geobacillus stearothermophilus] Length = 411 Score = 77.1 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 11/87 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 I D F G GGI E + E+ V+TY AN + + DI + + Sbjct: 7 IIDCFSGPGGICTGFRAA----GFETLLAIELVESCVETYTANHKDVPVINKDIRDVTEE 62 Query: 63 DIPD------HDVLLAGFPCQPFSQAG 83 ++ D+L AG PC+ FS AG Sbjct: 63 EVKRIVGNRVVDILTAGMPCETFSTAG 89 >gi|282859820|ref|ZP_06268914.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010] gi|282587440|gb|EFB92651.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010] Length = 356 Score = 77.1 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 9/84 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DLFCGIGG+ Q + + + Y+ N DI K+ Sbjct: 6 IKVVDLFCGIGGLSNGFFQ----EGFDVVAGYDNDKSCKFAYEVNNHAKFHLADITKVTG 61 Query: 62 QDIPDH--D---VLLAGFPCQPFS 80 ++I D +L+ PCQPFS Sbjct: 62 KEINQQFGDSLKILVGCAPCQPFS 85 >gi|256078707|ref|XP_002575636.1| DNA (cytosine-5)-methyltransferase [Schistosoma mansoni] gi|238660878|emb|CAZ31869.1| DNA (cytosine-5)-methyltransferase, putative [Schistosoma mansoni] Length = 368 Score = 77.1 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 11/88 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ +L+ GIGG+ + +++ E + EIN + Y+ NFPNTL ++ Sbjct: 1 MRVLELYSGIGGMHIAFKESTVKH--EVVAAVEINGVATDVYKYNFPNTLTLN---RVIE 55 Query: 62 QDIPD------HDVLLAGFPCQPFSQAG 83 PD +V PCQPF++ G Sbjct: 56 SFSPDYVCSLNANVWSLCPPCQPFTRLG 83 >gi|197124333|ref|YP_002136284.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K] gi|196174182|gb|ACG75155.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K] Length = 657 Score = 77.1 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 14/91 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAK 58 + DLFCG GG+ + + + +P ++KT N P I D+ + Sbjct: 264 TVVDLFCGAGGLSEGFTRA----GFRLVAAVDRDPVALKTLWLNHPSLGRERTISTDVRE 319 Query: 59 IKTQDIPD------HDVLLAGFPCQPFSQAG 83 + + DVL+ PCQ FS G Sbjct: 320 LAPARLKKLLGRRRLDVLVGAPPCQGFSTVG 350 >gi|224092438|ref|XP_002309610.1| DNA methyltransferase [Populus trichocarpa] gi|222855586|gb|EEE93133.1| DNA methyltransferase [Populus trichocarpa] Length = 350 Score = 77.1 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ + + GIGG+R L + N + + +IN + Y+ NF + G+I + Sbjct: 3 RVLEFYSGIGGMRYSLMKAG--VNAKVVEAFDINDKANDVYEYNFGHRPYQGNIETLTAA 60 Query: 63 DIPD--HDVLLAGFPCQPFSQAG 83 D+ + L PCQP+++ G Sbjct: 61 DLDNYGAHTWLLSPPCQPYTRQG 83 >gi|108562472|ref|YP_626788.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1] gi|107836245|gb|ABF84114.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1] Length = 355 Score = 77.1 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPNTL-IFGDI- 56 KI DLFCG GG LE+ ++C + ++ T++ N N + + GDI Sbjct: 3 YKILDLFCGAGGFSAGLERLEEFDALIGLDC------DKQALITFENNHKNAIGVCGDIT 56 Query: 57 -AKIKTQDIP-----DHDVLLAGFPCQPFSQAG 83 +IK + I + ++++ G PCQ FS G Sbjct: 57 QTEIKEKVIKLAKKLEINMIIGGPPCQGFSNKG 89 >gi|331085773|ref|ZP_08334856.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406696|gb|EGG86201.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 356 Score = 76.7 bits (189), Expect = 8e-13, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 + DLF G GG+ + + ++ T+ N + D++K + Sbjct: 1 MNAIDLFAGCGGLSKGFMDA----GYNIIVGVDNDQAALNTFAKNHNGAVALNADLSKQE 56 Query: 61 T-QDI------PDHDVLLAGFPCQPFSQAG 83 T +I DV++AG PCQ FS G Sbjct: 57 TFDEIKRIAGKRKIDVIIAGPPCQGFSLTG 86 >gi|29350162|ref|NP_813665.1| putative cytosine-specific methyltransferase [Bacteroides thetaiotaomicron VPI-5482] gi|29342074|gb|AAO79859.1| putative cytosine-specific methyltransferase [Bacteroides thetaiotaomicron VPI-5482] Length = 402 Score = 76.7 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 22/99 (22%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---------FPNTLIF 53 D+F G GG+ L L + F+ E N + KT + N +P+ L Sbjct: 5 TYIDIFAGCGGLSLGLHNA----GWQGLFAVEKNADAFKTLEYNLIEKVNHFLWPDWLPK 60 Query: 54 --GDI----AKIKTQDI---PDHDVLLAGFPCQPFSQAG 83 DI K Q + D+++ G PCQ FS AG Sbjct: 61 TSHDINVVLKDYKEQLLGLQRKVDLVVGGPPCQGFSMAG 99 >gi|296445050|ref|ZP_06887011.1| DNA-cytosine methyltransferase [Methylosinus trichosporium OB3b] gi|296257471|gb|EFH04537.1| DNA-cytosine methyltransferase [Methylosinus trichosporium OB3b] Length = 380 Score = 76.7 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 7/77 (9%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKTQDI 64 + F G G +R L C +++ + +Y+AN+ TL+ D+ ++ + Sbjct: 7 EFFAGGGMVRAGL-----GAGWRCLLANDFDARKCASYRANWGGETLVERDVRDLQASQL 61 Query: 65 PD-HDVLLAGFPCQPFS 80 P D++ A FPCQ S Sbjct: 62 PGLADLVWASFPCQDLS 78 >gi|169834887|ref|YP_001715830.1| modification methylase [Clostridium botulinum A3 str. Loch Maree] gi|169408994|gb|ACA57404.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum A3 str. Loch Maree] Length = 284 Score = 76.7 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 4/80 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+ F G GG+ L L Q + S EI+ T + NF + + DI+KI Sbjct: 1 MITAKSYFSGAGGMDLGLVQA----GINITHSYEIDSTCCNTLRTNFTHEIHQEDISKIT 56 Query: 61 TQDIPDHDVLLAGFPCQPFS 80 D D D+ + FPC +S Sbjct: 57 VLDQQDADIYVGTFPCTKYS 76 >gi|189350232|ref|YP_001945860.1| DNA (cytosine-5-)-methyltransferase [Burkholderia multivorans ATCC 17616] gi|189334254|dbj|BAG43324.1| DNA (cytosine-5-)-methyltransferase [Burkholderia multivorans ATCC 17616] Length = 380 Score = 76.7 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 8/84 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + GI ++ F SEI P+ ++P+ GD+ K Sbjct: 3 FRFGSVCSGI----EAASCAWHPLGWRTAFVSEIEPFPCAVLAHHYPSVPNLGDMTNFK- 57 Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83 + PD D+L+ G PCQ FS AG Sbjct: 58 -EWPDAAIDLLVGGTPCQSFSVAG 80 >gi|157953822|ref|YP_001498713.1| hypothetical protein AR158_C632R [Paramecium bursaria Chlorella virus AR158] gi|156068470|gb|ABU44177.1| hypothetical protein AR158_C632R [Paramecium bursaria Chlorella virus AR158] Length = 348 Score = 76.7 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 L+ DLF GIGGI L + VE E N + + P +F D+ Sbjct: 3 LRALDLFSGIGGITHGLREI-----VEPIAFVEKNDEARSFLKKKHPEIPVFDDVCSFDA 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 T+ I D++LAG+PC FS AG Sbjct: 58 TKWIDKVDIILAGWPCTGFSNAG 80 >gi|94958344|gb|ABF47306.1| Dcm [Clostridium perfringens] gi|94958377|gb|ABF47337.1| Dcm [Clostridium perfringens] Length = 339 Score = 76.7 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANF--PNTLIFGDIA 57 +K+ LF GIG E+ ++N+E E + Y+ Y F D+ Sbjct: 1 MKVLSLFSGIG----AFERAIENKNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVN 56 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + D D++ GFPC S AG Sbjct: 57 WVDGTHFKDIDLITYGFPCTDISLAG 82 >gi|283834911|ref|ZP_06354652.1| C-5 cytosine-specific DNA methylase family protein [Citrobacter youngae ATCC 29220] gi|291069174|gb|EFE07283.1| C-5 cytosine-specific DNA methylase family protein [Citrobacter youngae ATCC 29220] Length = 400 Score = 76.7 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 18/93 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------PNTLIFGD 55 +K DLF G GG L ++ + E++ + TY+ N L+ D Sbjct: 14 IKAIDLFSGAGGFSL----AALELGIDVLSAIELDKDACDTYRDNLIRKRENNIKLLNQD 69 Query: 56 IAKIKTQDI--------PDHDVLLAGFPCQPFS 80 I I + + D+++ G PCQ FS Sbjct: 70 IMSISPMSMMEDLFLLEGELDIIIGGPPCQGFS 102 >gi|297812763|ref|XP_002874265.1| DNA methyltransferase-2 [Arabidopsis lyrata subsp. lyrata] gi|297320102|gb|EFH50524.1| DNA methyltransferase-2 [Arabidopsis lyrata subsp. lyrata] Length = 383 Score = 76.7 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ + + GIGG+R L + E + EIN + YQ NF + G+I + Sbjct: 16 RVLEFYSGIGGMRYSLMASGVVA--EVVEAFEINDSANDVYQHNFKHRPYQGNIQSLTAV 73 Query: 63 DIPD--HDVLLAGFPCQPFSQAG 83 D+ D L PCQP+++ G Sbjct: 74 DLDKYNADAWLLSPPCQPYTRQG 96 >gi|309789600|ref|ZP_07684181.1| BsaWI methylase [Oscillochloris trichoides DG6] gi|308228336|gb|EFO81983.1| BsaWI methylase [Oscillochloris trichoides DG6] Length = 436 Score = 76.7 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 15/89 (16%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDI 64 ++F G GG+ L L + + E VKTY+ N P T+ I D+ I ++ + Sbjct: 18 EMFTGPGGLSLGLRSS----GFHVVGAVEKVESCVKTYRRNHPETIVIHDDVRNITSEQV 73 Query: 65 ----------PDHDVLLAGFPCQPFSQAG 83 D++ G PC+ FS AG Sbjct: 74 ISIVLKVTGKKTVDLVAGGPPCETFSTAG 102 >gi|224539035|ref|ZP_03679574.1| hypothetical protein BACCELL_03935 [Bacteroides cellulosilyticus DSM 14838] gi|224519363|gb|EEF88468.1| hypothetical protein BACCELL_03935 [Bacteroides cellulosilyticus DSM 14838] Length = 345 Score = 76.7 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 13/88 (14%) Query: 2 LKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAK 58 +K+ DLF G+GG+ L + + + EI+ + Y+ N T + D I Sbjct: 1 MKLYSIDLFSGVGGLTQGLRKA----GFQTKMAFEIDELASSVYKLNHKRTKVITDNIRN 56 Query: 59 IKTQDIPD------HDVLLAGFPCQPFS 80 + T+ + +L PCQ FS Sbjct: 57 VSTEKVKKQFKGKTIHLLAGCPPCQGFS 84 >gi|325127899|gb|EGC50802.1| DNA-cytosine methyltransferase [Neisseria meningitidis N1568] Length = 411 Score = 76.7 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIA 57 +++ +F GIG +EQ F+ + N FS +I+PY K+Y N+ DI Sbjct: 38 IRLATVFSGIG----AVEQAFHRLNLNHTIVFSGDIDPYVKKSYLGNYKLNEDFWHNDIT 93 Query: 58 KIKTQDIPD-HDVLLAGFPCQPFSQAG 83 + + + D+L+ G PCQ FS G Sbjct: 94 QFDARKFRNQVDILVGGSPCQAFSMVG 120 >gi|169834680|ref|YP_001693292.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] gi|169123228|gb|ACA47063.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str. Okra] Length = 284 Score = 76.7 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 4/80 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+ F G GG+ L L Q + S EI+ T + NF + + DI+KI Sbjct: 1 MITAKSYFSGAGGMDLGLVQA----GINITHSYEIDSTCCNTLRTNFTHEIHQEDISKIT 56 Query: 61 TQDIPDHDVLLAGFPCQPFS 80 D D D+ + FPC +S Sbjct: 57 VLDQQDADIYVGTFPCTRYS 76 >gi|73948982|ref|XP_848593.1| PREDICTED: similar to DNA (cytosine-5)-methyltransferase-like protein 2 (Dnmt2) (DNA methyltransferase homolog HsaIIP) (DNA MTase homolog HsaIIP) (M.HsaIIP) (PuMet) isoform 2 [Canis familiaris] Length = 391 Score = 76.7 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ +L+ GIGG+ L ++ + + ++N + + Y+ NFP+T + I+ Sbjct: 4 LRVLELYSGIGGMHQALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLA--KTIEG 59 Query: 62 QDIPDHD-----VLLAGFPCQPFSQAG 83 + + D ++L PCQPF++ G Sbjct: 60 ITLEEFDKLSFNMILMSPPCQPFTRIG 86 >gi|326790943|ref|YP_004308764.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427] gi|326541707|gb|ADZ83566.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427] Length = 292 Score = 76.7 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + LF GI + LE+ V+ +++SEI S+K + N+P + GDI I Sbjct: 1 MNVLSLFDGISCGMVALERAGIK--VDNYYASEIEQDSIKISKKNYPWIIQLGDITNITK 58 Query: 62 Q---DIPDHDVLLAGFPCQPFSQ 81 + I D+++ G PCQ S Sbjct: 59 EMLDTIMPIDIVIGGSPCQDLSV 81 >gi|15676724|ref|NP_273868.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis MC58] gi|7226061|gb|AAF41239.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis MC58] gi|308389005|gb|ADO31325.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha710] gi|316984499|gb|EFV63467.1| modification methylase HpaII [Neisseria meningitidis H44/76] gi|325129944|gb|EGC52743.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304] gi|325140023|gb|EGC62552.1| DNA-cytosine methyltransferase [Neisseria meningitidis CU385] gi|325206334|gb|ADZ01787.1| DNA-cytosine methyltransferase [Neisseria meningitidis M04-240196] Length = 411 Score = 76.7 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIA 57 +++ +F GIG +EQ F+ + N FS +I+PY K+Y N+ DI Sbjct: 38 IRLATVFSGIG----AVEQAFHRLNLNHTIVFSGDIDPYVKKSYLGNYKLNEDFWHNDIT 93 Query: 58 KIKTQDIPD-HDVLLAGFPCQPFSQAG 83 + + + D+L+ G PCQ FS G Sbjct: 94 QFDARKFRNQVDILVGGSPCQAFSMVG 120 >gi|168207074|ref|ZP_02633079.1| Dcm [Clostridium perfringens E str. JGS1987] gi|170661488|gb|EDT14171.1| Dcm [Clostridium perfringens E str. JGS1987] Length = 339 Score = 76.7 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANF--PNTLIFGDIA 57 +++ LF GIG E+ ++N+E E + Y+ Y F D+ Sbjct: 1 MRVLSLFSGIG----AFERAIENKNIEHEIVNYCEKDKYASYAYSKLFRLSEAKNLWDVN 56 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + + D D++ GFPC S AG Sbjct: 57 LVDGKVFKDIDLVTYGFPCTDISLAG 82 >gi|325144138|gb|EGC66445.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240013] gi|325200491|gb|ADY95946.1| DNA-cytosine methyltransferase [Neisseria meningitidis H44/76] Length = 406 Score = 76.7 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIA 57 +++ +F GIG +EQ F+ + N FS +I+PY K+Y N+ DI Sbjct: 33 IRLATVFSGIG----AVEQAFHRLNLNHTIVFSGDIDPYVKKSYLGNYKLNEDFWHNDIT 88 Query: 58 KIKTQDIPD-HDVLLAGFPCQPFSQAG 83 + + + D+L+ G PCQ FS G Sbjct: 89 QFDARKFRNQVDILVGGSPCQAFSMVG 115 >gi|260583507|ref|ZP_05851255.1| modification methylase HphIA [Granulicatella elegans ATCC 700633] gi|260158133|gb|EEW93201.1| modification methylase HphIA [Granulicatella elegans ATCC 700633] Length = 103 Score = 76.7 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 9/85 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + DLF G+GG L + F E ++E++ Y+ N P +I DI+K+ Sbjct: 5 VIDLFFGVGG----LSKEFFDSGFEIVLANEVDYSIANFYKKNHPKVKMINEDISKLDID 60 Query: 63 DI----PDHDVLLAGFPCQPFSQAG 83 D+ + DV++ G PCQ FSQ G Sbjct: 61 DVFNEYKNIDVIVWGPPCQGFSQKG 85 >gi|157953266|ref|YP_001498157.1| hypothetical protein AR158_C075L [Paramecium bursaria Chlorella virus AR158] gi|156067914|gb|ABU43621.1| hypothetical protein AR158_C075L [Paramecium bursaria Chlorella virus AR158] Length = 343 Score = 76.3 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML+ DLF GIGG L ++ E + FP+ IF D+ Sbjct: 4 MLRSLDLFSGIGGNSYALRDI-----LKPIAYVEREQHLRDFLGRKFPDVPIFDDVVTFD 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 T+ + D D++ AGFPC FS AG Sbjct: 59 TRSVKDIDIITAGFPCTGFSTAG 81 >gi|228931114|ref|ZP_04094051.1| Phage-related DNA methylase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228828566|gb|EEM74265.1| Phage-related DNA methylase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 221 Score = 76.3 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Query: 22 FNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPF 79 + +C E + ++ K+Y+ N DI I IP DV GFPC Sbjct: 1 MEEASHKCIGYVEWDKFARKSYESIHNTRGEWTEHDINNIIPGAIPKADVWTFGFPCTDI 60 Query: 80 SQA 82 S A Sbjct: 61 SIA 63 >gi|296081999|emb|CBI21004.3| unnamed protein product [Vitis vinifera] Length = 366 Score = 76.3 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ + + GIGG+R L++ N + + +IN + YQ NF + G+I + Sbjct: 15 RVLEFYSGIGGMRYSLKRGG--VNAKIVEAFDINNIANDVYQHNFGHRPCQGNIQSLTAA 72 Query: 63 DIP--DHDVLLAGFPCQPFSQAG 83 D+ L PCQP+++ G Sbjct: 73 DLDRYRAHAWLLSPPCQPYTRQG 95 >gi|219848287|ref|YP_002462720.1| DNA-cytosine methyltransferase [Chloroflexus aggregans DSM 9485] gi|219542546|gb|ACL24284.1| DNA-cytosine methyltransferase [Chloroflexus aggregans DSM 9485] Length = 362 Score = 76.3 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 13/87 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT 61 + DLF G GG+ + + E +P + +TY N P ++ DI I Sbjct: 8 TMIDLFAGCGGVTTGF----KAKGFNVLAAVEFDPVTAQTYHLNHPEVALYVQDIRDISP 63 Query: 62 QDI--------PDHDVLLAGFPCQPFS 80 ++ VL PCQPFS Sbjct: 64 NEMMARCRLERGHLTVLSVCAPCQPFS 90 >gi|296243020|ref|YP_003650507.1| DNA-cytosine methyltransferase [Thermosphaera aggregans DSM 11486] gi|296095604|gb|ADG91555.1| DNA-cytosine methyltransferase [Thermosphaera aggregans DSM 11486] Length = 323 Score = 76.3 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 + DLFCG GG L T R + + + TY+ NFP ++ DI + Sbjct: 4 YTVVDLFCGAGGFSLGFHLT---RRFRTLLAIDNYNPAGLTYKLNFPMVKVLLEDIKDVN 60 Query: 61 TQDIP------DHDVLLAGFPCQPFSQA 82 + DVL+ PC+PF+ A Sbjct: 61 DSLLRKILGGAKIDVLIGSPPCEPFTGA 88 >gi|299145238|ref|ZP_07038306.1| putative cytosine-specific methyltransferase protein [Bacteroides sp. 3_1_23] gi|298515729|gb|EFI39610.1| putative cytosine-specific methyltransferase protein [Bacteroides sp. 3_1_23] Length = 402 Score = 76.3 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 28/102 (27%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------------FPN 49 D+F G GG+ L L + F+ E N + KT + N FP Sbjct: 5 TYIDIFAGCGGLSLGLHNA----GWQGLFAVEKNADAFKTLEYNLIKKVNHFLWPDWFPK 60 Query: 50 TLIFGDIAKIKTQDIPD--------HDVLLAGFPCQPFSQAG 83 T DI + +D + D+++ G PCQ FS AG Sbjct: 61 TSH--DI-NVVLKDYKEQLLGLQQKVDLVVGGPPCQGFSMAG 99 >gi|168211060|ref|ZP_02636685.1| Dcm [Clostridium perfringens B str. ATCC 3626] gi|170710923|gb|EDT23105.1| Dcm [Clostridium perfringens B str. ATCC 3626] Length = 339 Score = 76.3 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANF--PNTLIFGDIA 57 +K+ LF GIG E+ ++N+E E + Y+ Y F D+ Sbjct: 1 MKVLSLFSGIG----AFERAIENKNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVN 56 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + D D++ GFPC S AG Sbjct: 57 WVDGTHFKDIDLVTYGFPCTDISLAG 82 >gi|304383753|ref|ZP_07366212.1| modification methylase HgiDII [Prevotella marshii DSM 16973] gi|304335277|gb|EFM01548.1| modification methylase HgiDII [Prevotella marshii DSM 16973] Length = 360 Score = 76.3 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ DLFCGIGG+ + + +I+ Y+ N I+ DI + Sbjct: 14 IEVIDLFCGIGGLSFGM----KSKGFNILAGYDIDATCRYAYETNNNAKFIYKDIKTVSP 69 Query: 62 QDIP------DHDVLLAGFPCQPFS 80 +I VL PCQPFS Sbjct: 70 DEIRTAYGKGSIRVLAGCAPCQPFS 94 >gi|307152624|ref|YP_003888008.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306982852|gb|ADN14733.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 708 Score = 76.3 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 8/81 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK-TQ 62 + DLF G GG+ L E + E++ + TYQ N +I + Sbjct: 34 VIDLFAGCGGLALGFEAA----GFKTTGY-EMSEEACATYQYNL--HGRCENITLTRYPT 86 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 I + V++AG PCQPFS+ G Sbjct: 87 LIDNPKVIIAGPPCQPFSKGG 107 >gi|114629608|ref|XP_001151654.1| PREDICTED: DNA methyltransferase 2 isoform 1 [Pan troglodytes] Length = 377 Score = 76.3 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 ++ D++L PCQPF++ G Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIG 86 >gi|168206682|ref|ZP_02632687.1| Dcm [Clostridium perfringens E str. JGS1987] gi|190015777|ref|YP_001967782.1| probable site-specific DNA-methyltransferase [Clostridium perfringens] gi|86450199|gb|ABC96308.1| probable site-specific DNA-methyltransferase [Clostridium perfringens] gi|170661882|gb|EDT14565.1| Dcm [Clostridium perfringens E str. JGS1987] Length = 339 Score = 76.3 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANF--PNTLIFGDIA 57 +K+ LF GIG E+ ++N+E E + Y+ Y F D+ Sbjct: 1 MKVLSLFSGIG----AFERAIENKNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVN 56 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + D D++ GFPC S AG Sbjct: 57 WVDGTHFKDIDLVTYGFPCTDISLAG 82 >gi|114629600|ref|XP_001151907.1| PREDICTED: DNA methyltransferase 2 isoform 5 [Pan troglodytes] gi|332833684|ref|XP_001151840.2| PREDICTED: tRNA (cytosine-5-)-methyltransferase isoform 4 [Pan troglodytes] gi|29126973|gb|AAH47733.1| TRNA aspartic acid methyltransferase 1 [Homo sapiens] Length = 391 Score = 76.3 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 ++ D++L PCQPF++ G Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIG 86 >gi|2895945|gb|AAC39764.1| putative DNA cytosine methyltransferase DNMT2 [Homo sapiens] Length = 391 Score = 76.3 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 ++ D++L PCQPF++ G Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIG 86 >gi|13096616|pdb|1G55|A Chain A, Structure Of Human Dnmt2, An Enigmatic Dna Methyltransferase Homologue Length = 343 Score = 76.3 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I Sbjct: 3 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 60 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 ++ D++L PCQPF++ G Sbjct: 61 LEEFDRLSFDMILMSPPCQPFTRIG 85 >gi|4758184|ref|NP_004403.1| tRNA (cytosine-5-)-methyltransferase [Homo sapiens] gi|17374834|sp|O14717|TRDMT_HUMAN RecName: Full=tRNA (cytosine-5-)-methyltransferase; AltName: Full=DNA (cytosine-5)-methyltransferase-like protein 2; Short=Dnmt2; AltName: Full=DNA methyltransferase homolog HsaIIP; Short=DNA MTase homolog HsaIIP; Short=M.HsaIIP; AltName: Full=PuMet gi|2627431|gb|AAC51939.1| putative DNA methyltransferase [Homo sapiens] gi|2894544|emb|CAA11272.1| DNA methyltransferase [Homo sapiens] gi|7576230|emb|CAB87964.1| tRNA aspartic acid methyltransferase 1 [Homo sapiens] gi|47496579|emb|CAG29312.1| DNMT2 [Homo sapiens] gi|119606623|gb|EAW86217.1| hCG23994, isoform CRA_a [Homo sapiens] gi|158256270|dbj|BAF84106.1| unnamed protein product [Homo sapiens] gi|167887559|gb|ACA05983.1| tRNA aspartic acid methyltransferase 1 variant 3 [Homo sapiens] gi|167887563|gb|ACA05987.1| tRNA aspartic acid methyltransferase 1 variant 4 [Homo sapiens] Length = 391 Score = 76.3 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 ++ D++L PCQPF++ G Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIG 86 >gi|148658198|ref|YP_001278403.1| DNA-cytosine methyltransferase [Roseiflexus sp. RS-1] gi|148570308|gb|ABQ92453.1| DNA-cytosine methyltransferase [Roseiflexus sp. RS-1] Length = 395 Score = 76.3 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 L + F G G R L R C F+++I+ + YQ NF ++ DI I Sbjct: 4 LTFYEFFAGGGLARFGL-----GRQWTCLFANDIDEKKAEVYQRNFSGAPEMVVEDIRHI 58 Query: 60 KTQDIP-DHDVLLAGFPCQPFSQAG 83 T +P + A FPCQ S AG Sbjct: 59 TTAMLPGRATLAWASFPCQDLSLAG 83 >gi|108763142|ref|YP_631786.1| DNA-cytosine methyltransferase [Myxococcus xanthus DK 1622] gi|108467022|gb|ABF92207.1| DNA-cytosine methyltransferase [Myxococcus xanthus DK 1622] Length = 505 Score = 76.0 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 22/100 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLI 52 L++ DLF G GG+ L EI+ ++ +++ NF P + Sbjct: 18 LRLLDLFSGCGGLTLGFVSA----GCVSVGGVEIDAHAAESHALNFHPLKDRSAAPWHAM 73 Query: 53 FGDIAKIKTQDIPD---------HDVLLAGFPCQPFSQAG 83 DI ++K + DV++ G PC F++ G Sbjct: 74 SKDILQLKPSSLNHLLKRPPNEGVDVIVGGPPCPAFTRVG 113 >gi|210630626|ref|ZP_03296529.1| hypothetical protein COLSTE_00414 [Collinsella stercoris DSM 13279] gi|210160401|gb|EEA91372.1| hypothetical protein COLSTE_00414 [Collinsella stercoris DSM 13279] Length = 402 Score = 76.0 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 17/92 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT-- 61 DLF G GG+ L + S++I P +KT+ AN I GDI+ + Sbjct: 140 FIDLFAGAGGLALGFVWA----GWQPVVSNDIVPDFLKTHAANIDGATICGDISDPEILN 195 Query: 62 ----------QDIPDHDV-LLAGFPCQPFSQA 82 +D PD + +L G PCQ FS A Sbjct: 196 SICDAAAKFRKDNPDSPLFVLGGPPCQGFSTA 227 >gi|147856667|emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera] Length = 1148 Score = 76.0 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ + + GIGG+R L++ N + + +IN + YQ NF + G+I + Sbjct: 865 RVLEFYSGIGGMRYSLKRGG--VNAKIVEAFDINNIANDVYQHNFGHRPYQGNIQSLTAA 922 Query: 63 DIP--DHDVLLAGFPCQPFSQAG 83 D+ L PCQP+++ G Sbjct: 923 DLDRYRAHAWLLSPPCQPYTRQG 945 >gi|67920370|ref|ZP_00513890.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67857854|gb|EAM53093.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 339 Score = 76.0 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 7/80 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLF G GG+ L E + E + E +Y+ N I Sbjct: 23 VLDLFAGCGGLSLGFEA----QGFETYGF-EKEQDCCHSYEKNLRGKCEQ--IELTVNSK 75 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 + V++ G PCQPFS G Sbjct: 76 LSGASVIIGGPPCQPFSVGG 95 >gi|332710686|ref|ZP_08430629.1| DNA-methyltransferase [Lyngbya majuscula 3L] gi|332350562|gb|EGJ30159.1| DNA-methyltransferase [Lyngbya majuscula 3L] Length = 450 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 38/108 (35%), Gaps = 33/108 (30%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQD 63 DLF G GG L +EQ + + E +P Y N P T + DIA + Q+ Sbjct: 11 VDLFAGAGGFSLGIEQA----GFDVALAVEQDPIHGAVYAFNSPQTKVLCTDIATLSGQE 66 Query: 64 IPDH----------------------------DVLLAGFPCQPFSQAG 83 I D+++ G PCQ FS G Sbjct: 67 IQKALREWGTEREQNQHCTEVSSQVSTIDLVIDLVIGGPPCQGFSLIG 114 >gi|291535263|emb|CBL08375.1| DNA-methyltransferase (dcm) [Roseburia intestinalis M50/1] Length = 350 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECF--FSSEINPYSVKTYQANF----PNTLIFG 54 ++ +LFCG GGI + + ++++ + + +TY+ N P T+ Sbjct: 3 YRLGELFCGPGGIAWGATHADIGNSDYSIVHQWANDYDASTCETYRRNICPDAPQTVYHE 62 Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI K + D L GFPC +S G Sbjct: 63 DIRKFDMSKLAPIDALAFGFPCNDYSVVG 91 >gi|317132208|ref|YP_004091522.1| DNA-cytosine methyltransferase [Ethanoligenens harbinense YUAN-3] gi|315470187|gb|ADU26791.1| DNA-cytosine methyltransferase [Ethanoligenens harbinense YUAN-3] Length = 346 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 9/91 (9%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAK 58 ++ D F GIGG ++Q N EI+ + K Y + T D+ Sbjct: 5 IRFFDCFAGIGGFYYGVQQIKSNKYEFRHVAYCEIDKSAQKFYDVACSSEGTQKIQDVKD 64 Query: 59 IKTQDIP------DHDVLLAGFPCQPFSQAG 83 IKT+ P D D+L AGFPCQ FS G Sbjct: 65 IKTKKNPNGIMVSDFDILFAGFPCQSFSNVG 95 >gi|67540936|ref|XP_664242.1| hypothetical protein AN6638.2 [Aspergillus nidulans FGSC A4] gi|28208637|gb|AAO37378.1|AF428247_1 c5 cytosine methyltransferase DmtA [Emericella nidulans] gi|40738977|gb|EAA58167.1| hypothetical protein AN6638.2 [Aspergillus nidulans FGSC A4] gi|259480219|tpe|CBF71150.1| TPA: C5 cytosine methyltransferase DmtAPutative uncharacterized protein ; [Source:UniProtKB/TrEMBL;Acc:Q876R1] [Aspergillus nidulans FGSC A4] Length = 615 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI- 59 D FCG GG+ E ++ ++ ++ P++ TY+ NFPN G DI Sbjct: 309 YTFGDGFCGAGGVSCGAEAA----GLDIKWAFDLCPHAAATYRLNFPNVECEGSDIFSFM 364 Query: 60 -KTQDIPDHDVLLAGFPCQPFSQA 82 ++ D+ PCQ FS A Sbjct: 365 TSNEEFMRVDISHGSPPCQTFSPA 388 >gi|213969524|ref|ZP_03397660.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato T1] gi|301385979|ref|ZP_07234397.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato Max13] gi|302059871|ref|ZP_07251412.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato K40] gi|302131547|ref|ZP_07257537.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925620|gb|EEB59179.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato T1] Length = 406 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + F G G R L C ++++++ TY N+ DI +K Sbjct: 12 FNFFEFFAGGGMARAGL-----GDEWNCLYANDMDHIKAATYINNWGGSHFDERDIHDVK 66 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 T+D+ + D+ A FPCQ S AG Sbjct: 67 TEDLKSNSDLAWASFPCQDLSVAG 90 >gi|296112182|ref|YP_003622593.1| putative C-5 cytosine-specific DNA methylase [Thiomonas sp. 3As] gi|294341994|emb|CAZ90422.1| putative C-5 cytosine-specific DNA methylase [Thiomonas sp. 3As] Length = 304 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 +K DLF G GG Q VE +++ P +V + AN P + D+ + Sbjct: 1 MKAIDLFSGAGGFTEGARQA----GVEVCWAANHWPAAVACHSANHPEAVHACQDLEQAD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 + +P HDVL+A CQ S A Sbjct: 57 WRAVPAHDVLMASPACQGHSPA 78 >gi|123965679|ref|YP_001010760.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT 9515] gi|123200045|gb|ABM71653.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT 9515] Length = 689 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 12/85 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK-TQD 63 DLF G GG+ L L + N + + +I S+ T++ +F D++K K + Sbjct: 55 VDLFSGAGGLSLGLHRA----NFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVVNE 110 Query: 64 IPD-------HDVLLAGFPCQPFSQ 81 I D ++ G PCQPFS+ Sbjct: 111 IADKLNECGEISLIAGGPPCQPFSR 135 >gi|167747653|ref|ZP_02419780.1| hypothetical protein ANACAC_02374 [Anaerostipes caccae DSM 14662] gi|239625035|ref|ZP_04668066.1| modification methylase Rho11sI [Clostridiales bacterium 1_7_47_FAA] gi|167653015|gb|EDR97144.1| hypothetical protein ANACAC_02374 [Anaerostipes caccae DSM 14662] gi|239521421|gb|EEQ61287.1| modification methylase Rho11sI [Clostridiales bacterium 1_7_47FAA] Length = 504 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 27 VECFFSSEINPYSVKTYQANFP--NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + E + Y+VK+Y A + GDI K+ + +P + + G PCQ FS +G Sbjct: 3 YKLINFCEFDKYAVKSYCAIHGVDESANLGDITKVDEKKLPYFNFICGGSPCQDFSLSG 61 >gi|288932478|ref|YP_003436538.1| DNA-cytosine methyltransferase [Ferroglobus placidus DSM 10642] gi|288894726|gb|ADC66263.1| DNA-cytosine methyltransferase [Ferroglobus placidus DSM 10642] Length = 301 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI D+F G GG + E + + ++V TY+ANF + D+ Sbjct: 1 MKIADIFAGAGGFARGFVE----EKFEVVVAVDSFKHAVNTYKANFDADVFQVDVKNFSG 56 Query: 62 QDIPD--HDVLLAGFPCQPFSQA 82 + + D ++++A PC+ F++A Sbjct: 57 KMLKDYGVEMIIASPPCEAFTKA 79 >gi|182625480|ref|ZP_02953252.1| Dcm [Clostridium perfringens D str. JGS1721] gi|177909320|gb|EDT71778.1| Dcm [Clostridium perfringens D str. JGS1721] Length = 339 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANF--PNTLIFGDIA 57 +K+ LF GIG E+ ++N+E E + Y+ Y F D+ Sbjct: 1 MKVLSLFSGIG----AFERAIENKNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVN 56 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + D D++ GFPC S AG Sbjct: 57 WVDGTHFKDIDLVTYGFPCTDISLAG 82 >gi|86475982|dbj|BAE79156.1| putative cytosine methyltransferase [Clostridium perfringens] Length = 339 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANF--PNTLIFGDIA 57 +K+ LF GIG E+ ++N+E E + Y+ Y F D+ Sbjct: 1 MKVLSLFSGIG----AFERAIENKNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVN 56 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + + D D++ GFPC S AG Sbjct: 57 WVNGTNFKDIDLVTYGFPCTDISLAG 82 >gi|328947611|ref|YP_004364948.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447935|gb|AEB13651.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 391 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 34/89 (38%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 D F G GGI L E + E V TY N P +I DI + Sbjct: 3 FTHIDCFSGPGGICTGLHAA----GFETKVAIEFIKSCVDTYSKNHPEVHVIHSDIRNVS 58 Query: 61 TQDIPDH------DVLLAGFPCQPFSQAG 83 + I D++ +G PC+ FS AG Sbjct: 59 KEQILPFIPKGGIDLVTSGMPCETFSTAG 87 >gi|332885826|gb|EGK06072.1| hypothetical protein HMPREF9456_02336 [Dysgonomonas mossii DSM 22836] Length = 346 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 14/90 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA-NFPNTLIFGDIAKIK 60 K D FCG GG+ L +E + + + +TY+ N + I+ D+ ++ Sbjct: 5 YKAIDFFCGGGGMTCGLRLA----GIEVVAGVDFDKDAKETYEYNNIGSKFIYSDVTQLP 60 Query: 61 TQDIPDH------D---VLLAGFPCQPFSQ 81 + H D +L+ PCQ +S Sbjct: 61 SDYFEKHLNINKNDDHLILVGCSPCQYYSI 90 >gi|309783383|ref|ZP_07678091.1| C-5 cytosine-specific DNA methylase family protein [Ralstonia sp. 5_7_47FAA] gi|330827391|ref|YP_004390629.1| C-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans K601] gi|308917844|gb|EFP63533.1| C-5 cytosine-specific DNA methylase family protein [Ralstonia sp. 5_7_47FAA] gi|329312699|gb|AEB87113.1| C-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans K601] Length = 304 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 ++ DLF G GG +++ P +V+ +Q N P+T D+ + Sbjct: 1 MRCIDLFAGAGGFTEGARLA----GARVVWAANHWPLAVQYHQTNHPDTWHECQDLQQAD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 + +P HDV+LA CQ S+A Sbjct: 57 WRAVPAHDVVLASPACQGHSRA 78 >gi|242253856|ref|NP_001156357.1| tRNA (cytosine-5-)-methyltransferase [Sus scrofa] gi|226222432|gb|ACO38647.1| DNA methyltransferase 2 [Sus scrofa] Length = 408 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ +L+ GIGG+ L ++ + + ++N + + Y+ NFP+T + I+ Sbjct: 4 LRVLELYSGIGGMHQALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLA--KTIEG 59 Query: 62 QDIPDHD-----VLLAGFPCQPFSQAG 83 + + D ++L PCQPF++ G Sbjct: 60 VTLEEFDRLSFNMVLMSPPCQPFTRIG 86 >gi|121582518|ref|YP_974050.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42] gi|120608576|gb|ABM44315.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42] Length = 304 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 ++ DLF G GG +++ P +V+ +Q N P+T D+ + Sbjct: 1 MRCIDLFAGAGGFTEGARLA----GARVVWAANHWPLAVQYHQTNHPDTWHECQDLQQAD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 + +P HDV+LA CQ S+A Sbjct: 57 WRAVPAHDVVLASPACQGHSRA 78 >gi|213964765|ref|ZP_03392965.1| modification methylase NaeI [Corynebacterium amycolatum SK46] gi|213952958|gb|EEB64340.1| modification methylase NaeI [Corynebacterium amycolatum SK46] Length = 333 Score = 76.0 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52 ++ G GG L LEQ + + E + + T + N N L+ Sbjct: 4 FTSLEICAGAGGQALGLEQAGFYH----VCTVENDRDACNTLRLNRDNDLVAAKQRWNVR 59 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D+ + D D++ G PC PFS AG Sbjct: 60 EDDVLNLNGADFKGVDLVAGGVPCPPFSIAG 90 >gi|313768404|ref|YP_004062084.1| hypothetical protein MpV1_201c [Micromonas sp. RCC1109 virus MpV1] gi|312599100|gb|ADQ91124.1| hypothetical protein MpV1_201c [Micromonas sp. RCC1109 virus MpV1] Length = 351 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 27/109 (24%) Query: 2 LKITDLFCGIGGIRLDL-EQTFNHRN-----------------------VECFFSSEINP 37 K+ LF G+ G+ L E+ HR+ F ++I Sbjct: 3 YKVLSLFSGLAGLDLGFSERVIVHRDSVDEEFVESEAPTKDFVHLKQLPFTTVFQNDILK 62 Query: 38 YSVKTYQAN-FPNTLIFGDIAKIKTQ--DIPDHDVLLAGFPCQPFSQAG 83 + + + N + + + DI ++ + + P+ DV+ GFPCQ FS +G Sbjct: 63 SAKEIAEWNGWAHNYVLKDIKELLDENYEFPEADVVTGGFPCQDFSHSG 111 >gi|169342462|ref|ZP_02863522.1| Dcm [Clostridium perfringens C str. JGS1495] gi|169299461|gb|EDS81526.1| Dcm [Clostridium perfringens C str. JGS1495] Length = 339 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANF--PNTLIFGDIA 57 +KI LF GIG E+ ++N+E E + Y+ Y F D+ Sbjct: 1 MKILSLFSGIG----AFERAIENKNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVN 56 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + D D++ GFPC S AG Sbjct: 57 WVDGTHFKDIDLITYGFPCTDISLAG 82 >gi|308183851|ref|YP_003927984.1| cytosine specific DNA methyltransferase [Helicobacter pylori SJM180] gi|308059771|gb|ADO01667.1| cytosine specific DNA methyltransferase [Helicobacter pylori SJM180] Length = 355 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPNTL-IFGDI- 56 KI DLFCG GG LE ++C + ++ T++ N N + + GDI Sbjct: 3 YKILDLFCGAGGFSAGLEYLKEFDALIGLDC------DKQALITFENNHKNAIGVCGDIT 56 Query: 57 -AKIKTQDIP-----DHDVLLAGFPCQPFSQAG 83 +IK + I + ++++ G PCQ FS G Sbjct: 57 QTEIKEKVIELAKKLEINMIIGGPPCQGFSNKG 89 >gi|294673127|ref|YP_003573743.1| C-5 cytosine-specific family DNA methylase [Prevotella ruminicola 23] gi|294473723|gb|ADE83112.1| DNA methylase, C-5 cytosine-specific family [Prevotella ruminicola 23] Length = 346 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 27/96 (28%) Query: 5 TDLFCGIGGIRLDLEQT---------FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 F G GG+ + + F VE ++E ++ D Sbjct: 13 ISFFSGCGGLDIGTQMAGARIISTLDFEPATVETVKANEFFKFA----------EHNCAD 62 Query: 56 IAKIKTQDI--------PDHDVLLAGFPCQPFSQAG 83 I + +D PD +++ G PCQPFS+AG Sbjct: 63 IRNVSGKDYSALLRSSNPDKLIIVGGPPCQPFSKAG 98 >gi|291539796|emb|CBL12907.1| Site-specific DNA methylase [Roseburia intestinalis XB6B4] Length = 107 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 12/84 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG GG+ L LEQ+ N+ EIN + +TY N ++ DI I +I Sbjct: 11 IDLFCGAGGLSLGLEQS----NITVPLGVEINAIAAQTYTNNLNGNVLQDDIRNITGHEI 66 Query: 65 --------PDHDVLLAGFPCQPFS 80 + +L PCQ FS Sbjct: 67 LEQLNLQVGELFLLAGCPPCQTFS 90 >gi|315604954|ref|ZP_07880010.1| modification methylase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313349|gb|EFU61410.1| modification methylase [Actinomyces sp. oral taxon 180 str. F0310] Length = 322 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGD----I 56 L ++ G GG L LEQ + EI+ ++ T + N P +I GD I Sbjct: 3 LTSIEICAGAGGQALGLEQA----GFDHLAVVEIDHHACNTLRENRPQWNVIEGDVVPWI 58 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + D++ G PC PFS AG Sbjct: 59 RD-HAHEYRGVDLVAGGVPCPPFSYAG 84 >gi|269129048|ref|YP_003302418.1| DNA-cytosine methyltransferase [Thermomonospora curvata DSM 43183] gi|268314006|gb|ACZ00381.1| DNA-cytosine methyltransferase [Thermomonospora curvata DSM 43183] Length = 418 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L + ++ G GG L LE + + E++ + T + N P + GD A + Sbjct: 4 LNVVEICAGAGGQSLGLELA----GFKHALAVELDANACNTLRLNRPEWKIAEGDAASLD 59 Query: 61 ---TQDIPDHDVLLAGFPCQPFSQAG 83 D + D+L G PC PF+ AG Sbjct: 60 VWNPADYQEIDLLAGGVPCPPFTIAG 85 >gi|155370467|ref|YP_001426001.1| hypothetical protein FR483_N369L [Paramecium bursaria Chlorella virus FR483] gi|155123787|gb|ABT15654.1| hypothetical protein FR483_N369L [Paramecium bursaria Chlorella virus FR483] Length = 342 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 6/84 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML DLF GIGGI L VE E N + PN +F D+ Sbjct: 1 MLHAIDLFSGIGGITHGLRGI-----VEPVAYVEKNDDARGFLAQKHPNVPVFDDVCTFD 55 Query: 61 TQD-IPDHDVLLAGFPCQPFSQAG 83 + D++ G+PC FS AG Sbjct: 56 ATPYLGKVDIITGGWPCTGFSTAG 79 >gi|153008840|ref|YP_001370055.1| DNA-cytosine methyltransferase [Ochrobactrum anthropi ATCC 49188] gi|151560728|gb|ABS14226.1| DNA-cytosine methyltransferase [Ochrobactrum anthropi ATCC 49188] Length = 414 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 14/92 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-FPNTLIFG-DIAKI 59 + F G GG F+SE + +TY AN P T++ G DI ++ Sbjct: 82 YNVISTFAGCGGSSTGYRMA----GFRVLFASEFIEAARETYLANARPGTIVDGRDIRQV 137 Query: 60 KTQDI--------PDHDVLLAGFPCQPFSQAG 83 +I + DV PC FS AG Sbjct: 138 TADEILAATGLKPGELDVFDGSPPCASFSTAG 169 >gi|217032842|ref|ZP_03438321.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128] gi|298737011|ref|YP_003729541.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] gi|216945425|gb|EEC24089.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128] gi|298356205|emb|CBI67077.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8] Length = 361 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPNTL-IFGDIA 57 KI DLFCG GG LE+ ++C + ++ T++ N N + + GDI Sbjct: 3 YKILDLFCGAGGFSAGLERLEEFDALIGLDC------DKQALITFENNHKNAIGVCGDIT 56 Query: 58 K--IKTQDIP-----DHDVLLAGFPCQPFSQAG 83 + IK + I ++++ G PCQ FS G Sbjct: 57 QAAIKEKVIKLAQTLGINMIIGGPPCQGFSNKG 89 >gi|222149028|ref|YP_002549985.1| DNA methylase [Agrobacterium vitis S4] gi|221736013|gb|ACM36976.1| DNA methylase [Agrobacterium vitis S4] Length = 492 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 22/100 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFG----- 54 L++ +L G GG+ L L ++ E +P + TY NF P + G Sbjct: 19 LRVLELCSGCGGMSLGLHAA----GLQLVGHVEQDPTASATYARNFLPPEDVDAGQWQKP 74 Query: 55 -DIAKIKTQD------IPD----HDVLLAGFPCQPFSQAG 83 D+ + ++ +PD DVL AG PCQ F++ G Sbjct: 75 RDMVECSPEELAKDLGLPDASGAFDVLAAGLPCQAFARIG 114 >gi|242058009|ref|XP_002458150.1| hypothetical protein SORBIDRAFT_03g027700 [Sorghum bicolor] gi|241930125|gb|EES03270.1| hypothetical protein SORBIDRAFT_03g027700 [Sorghum bicolor] Length = 233 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ + + GIGG+R L + E + +IN + Y+ NF + G+I + Sbjct: 8 RVLEFYSGIGGMRYSLMASGVRA--EVVEAFDINDVANDVYEHNFGHRPCQGNIQTLTAS 65 Query: 63 DIP--DHDVLLAGFPCQPFSQAG 83 D+ L PCQP+++ G Sbjct: 66 DLDKYKAHAWLLSPPCQPYTRQG 88 >gi|220923821|ref|YP_002499123.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060] gi|219948428|gb|ACL58820.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060] Length = 358 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 18/92 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60 +++ DLFCG GG+ L + S +I+P +YQ NF + + DI+ + Sbjct: 1 MRLIDLFCGCGGLSLGARNA----GFKVVSSVDIDPILTSSYQRNFRGSRPLIADISSLT 56 Query: 61 TQDIPDHDVLLA---------GFPCQPFSQAG 83 ++ H A G PCQ FS+AG Sbjct: 57 RSELLRH----AGGHVDGVVGGPPCQGFSEAG 84 >gi|86140476|ref|ZP_01059035.1| modification methylase BepI-like [Leeuwenhoekiella blandensis MED217] gi|85832418|gb|EAQ50867.1| modification methylase BepI-like [Leeuwenhoekiella blandensis MED217] Length = 264 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 39/122 (31%), Gaps = 40/122 (32%) Query: 2 LKITDLFCGIGGIRLDLEQTF---------------------------NHRNVECFFSSE 34 L + LF G GG+ L E F + F+++ Sbjct: 38 LNMLSLFSGCGGMDLGFEGQFSVLKSSVNEILSPNFIEKELENNFVELKKTRFKTVFAND 97 Query: 35 INPYSVKTYQANFPNTLIFG---------DIAKIK---TQDIP-DHDVLLAGFPCQPFSQ 81 I + + F D+ K+ T P D D++ GFPCQ FS Sbjct: 98 ILKDARNAWVHYFAKRGHNAEDFQTDSIVDLVKLHQSGTNVFPKDIDIVTGGFPCQDFSV 157 Query: 82 AG 83 AG Sbjct: 158 AG 159 >gi|254421659|ref|ZP_05035377.1| C-5 cytosine-specific DNA methylase superfamily [Synechococcus sp. PCC 7335] gi|196189148|gb|EDX84112.1| C-5 cytosine-specific DNA methylase superfamily [Synechococcus sp. PCC 7335] Length = 427 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 14/89 (15%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQD 63 DLF G GG+ L EQ + + EI+P ++ NFP +I + ++ ++ Sbjct: 12 IDLFAGAGGLCLGFEQA----GFDVPVAIEIDPIHAAVHRFNFPLCKVIPRSVKEVTGKE 67 Query: 64 IPDH---------DVLLAGFPCQPFSQAG 83 I ++ G PCQ FS G Sbjct: 68 ILSVAKLSSQQPITAVIGGAPCQGFSVMG 96 >gi|42766604|gb|AAS45432.1| At5g25480 [Arabidopsis thaliana] Length = 176 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + + + GIGG+R L + E + EIN + YQ NF + G+I + D Sbjct: 17 VLEFYSGIGGMRYSLMASGIVS--EVVEAFEINDSANDVYQHNFKHRPYQGNIQSLTAAD 74 Query: 64 IPD--HDVLLAGFPCQPFSQAG 83 + D L PCQP+++ G Sbjct: 75 LDKYNADAWLLSPPCQPYTRQG 96 >gi|21553420|gb|AAM62513.1| DNA methyltransferase PMT1-like protein [Arabidopsis thaliana] Length = 383 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + + + GIGG+R L + E + EIN + YQ NF + G+I + D Sbjct: 17 VLEFYSGIGGMRYSLMASGIVS--EVVEAFEINDSANDVYQHNFKHRPYQGNIQSLTAAD 74 Query: 64 IPD--HDVLLAGFPCQPFSQAG 83 + D L PCQP+++ G Sbjct: 75 LDKYNADAWLLSPPCQPYTRQG 96 >gi|18420929|ref|NP_568474.1| DNMT2 (DNA METHYLTRANSFERASE-2); DNA binding [Arabidopsis thaliana] gi|332006070|gb|AED93453.1| DNA methyltransferase-2 [Arabidopsis thaliana] Length = 383 Score = 75.6 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + + + GIGG+R L + E + EIN + YQ NF + G+I + D Sbjct: 17 VLEFYSGIGGMRYSLMASGIVS--EVVEAFEINDSANDVYQHNFKHRPYQGNIQSLTAAD 74 Query: 64 IPD--HDVLLAGFPCQPFSQAG 83 + D L PCQP+++ G Sbjct: 75 LDKYNADAWLLSPPCQPYTRQG 96 >gi|194765989|ref|XP_001965107.1| GF21561 [Drosophila ananassae] gi|190617717|gb|EDV33241.1| GF21561 [Drosophila ananassae] Length = 334 Score = 75.2 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 ++ +LF GIGG+ + E + ++N + Y NF T+ +I + Sbjct: 3 FRVLELFSGIGGMHYAFQCA--QLEGEVVGAMDVNTVANAVYAHNFGQKTVKTRNIQSLT 60 Query: 61 TQDIPDH--DVLLAGFPCQPFSQAG 83 +++ +++L PCQP ++ G Sbjct: 61 EKEVTKVNANMILMSPPCQPHTRQG 85 >gi|159899163|ref|YP_001545410.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus ATCC 23779] gi|159892202|gb|ABX05282.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus ATCC 23779] Length = 362 Score = 75.2 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----D 55 + +F G GG+ L +Q + + S +I+ + + + +F N + D Sbjct: 145 LFSALSIFSGAGGLNLGAQQAKLPNAKWQTIASIDIDRDACTSLEHHFANKNVICQNIID 204 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I + K+ D+ G PCQ FSQAG Sbjct: 205 ITQPKSLMSQPLDLSYGGPPCQSFSQAG 232 >gi|157164246|ref|YP_001466260.1| modification methylase HaeIII (cytosine-specificmethyltransferase HaeIII; M.HaeIII) [Campylobacter concisus 13826] gi|112801543|gb|EAT98887.1| modification methylase HaeIII (Cytosine-specificmethyltransferase HaeIII) (M.HaeIII) [Campylobacter concisus 13826] Length = 388 Score = 75.2 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 36/100 (36%), Gaps = 25/100 (25%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ---ANFPNTLIFGDIAKI 59 DLF G GG+ Q E++ Y+ T Q ++ +I KI Sbjct: 5 TFIDLFAGAGGMAEGFYQ----EGYMALTHIELDKYACLTLQERMRHYGYH--ENEINKI 58 Query: 60 KTQDI----------------PDHDVLLAGFPCQPFSQAG 83 K DI D DV++ G PCQ FS G Sbjct: 59 KPTDITDKNIISIIESNIGKTSDIDVIIGGPPCQSFSSHG 98 >gi|145207311|gb|AAI14323.2| TRNA aspartic acid methyltransferase 1 [Danio rerio] Length = 381 Score = 75.2 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 L++ +L+ GIGG+ L+++ E + ++N + Y+ NFP T + I + Sbjct: 7 LRVFELYSGIGGMHYALKESLVPA--EVVAAVDVNTTANLIYKHNFPTTQLLPKTIEGMT 64 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 QD + D++L PCQPF++ G Sbjct: 65 LQDFDRLNFDMILMSPPCQPFTRIG 89 >gi|89941477|ref|NP_001018153.1| tRNA (cytosine-5-)-methyltransferase [Danio rerio] gi|62433271|dbj|BAD95483.1| DNA methyltransferase [Danio rerio] Length = 381 Score = 75.2 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 L++ +L+ GIGG+ L+++ E + ++N + Y+ NFP T + I + Sbjct: 7 LRVFELYSGIGGMHYALKESLVPA--EVVAAVDVNTTANLIYKHNFPTTQLLPKTIEGMT 64 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 QD + D++L PCQPF++ G Sbjct: 65 LQDFDRLNFDMILMSPPCQPFTRIG 89 >gi|228958671|ref|ZP_04120388.1| Prophage LambdaBa01, C-5 cytosine-specific DNA methylase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801009|gb|EEM47909.1| Prophage LambdaBa01, C-5 cytosine-specific DNA methylase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 251 Score = 75.2 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DL GI GI + + ++ EI ++ K + N+PN IF D+ K+ Sbjct: 1 MKMLDLCSGIAGISMAADWA----GIDTAAFCEIEEFNQKVLRKNYPNIPIFPDLYKLTK 56 Query: 62 QDIPD--HD-----VLLAGFPCQPFSQAG 83 Q + D D V+ AG+PCQ S AG Sbjct: 57 QSLIDGGVDVDSIGVISAGYPCQGESMAG 85 >gi|220926735|ref|YP_002502037.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060] gi|219951342|gb|ACL61734.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060] Length = 454 Score = 75.2 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 14/92 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFG-DIAKI 59 + F G GG F+SE + +TY+AN P+T++ G DI ++ Sbjct: 90 FNVISTFAGGGGSSTGYRMA----GYRILFASEFVEAARETYRANASPSTILDGRDIRQL 145 Query: 60 KTQDI--------PDHDVLLAGFPCQPFSQAG 83 +D+ + D+L PC FS AG Sbjct: 146 TAEDLLFATGLKPGELDILDGSPPCASFSTAG 177 >gi|157412795|ref|YP_001483661.1| site-specific DNA methylase [Prochlorococcus marinus str. MIT 9215] gi|157387370|gb|ABV50075.1| Site-specific DNA methylase [Prochlorococcus marinus str. MIT 9215] Length = 698 Score = 75.2 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 12/85 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------IAK 58 DLF G GG+ L L + N + + +I S+ T++ +F D I + Sbjct: 55 VDLFSGAGGLSLGLHRA----NFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINE 110 Query: 59 IKTQ--DIPDHDVLLAGFPCQPFSQ 81 I Q + ++ G PCQPFS+ Sbjct: 111 ISEQLNKCGEISLIAGGPPCQPFSR 135 >gi|123967970|ref|YP_001008828.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. AS9601] gi|123198080|gb|ABM69721.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. AS9601] Length = 698 Score = 75.2 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 12/85 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------IAK 58 DLF G GG+ L L + N + + +I S+ T++ +F D I + Sbjct: 55 VDLFSGAGGLSLGLHRA----NFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINE 110 Query: 59 IKTQ--DIPDHDVLLAGFPCQPFSQ 81 I Q + ++ G PCQPFS+ Sbjct: 111 ISEQLNKCGEISLIAGGPPCQPFSR 135 >gi|91069833|gb|ABE10765.1| C-5 cytosine-specific DNA methylase [uncultured Prochlorococcus marinus clone ASNC1092] Length = 686 Score = 75.2 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 12/85 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------IAK 58 DLF G GG+ L L + N + + +I S+ T++ +F D I + Sbjct: 55 VDLFSGAGGLSLGLHRA----NFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINE 110 Query: 59 IKTQ--DIPDHDVLLAGFPCQPFSQ 81 I Q + ++ G PCQPFS+ Sbjct: 111 ISEQLNKCGEISLIAGGPPCQPFSR 135 >gi|78778763|ref|YP_396875.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT 9312] gi|78712262|gb|ABB49439.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT 9312] Length = 686 Score = 75.2 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 12/85 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------IAK 58 DLF G GG+ L L + N + + +I S+ T++ +F D I + Sbjct: 55 VDLFSGAGGLSLGLHRA----NFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINE 110 Query: 59 IKTQ--DIPDHDVLLAGFPCQPFSQ 81 I Q + ++ G PCQPFS+ Sbjct: 111 ISEQLNKCGEISLIAGGPPCQPFSR 135 >gi|330997449|ref|ZP_08321300.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] gi|329570823|gb|EGG52539.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] Length = 357 Score = 75.2 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAK-- 58 + DLFCG GG+ E+ + ++ T+ N + D+++ Sbjct: 6 YNVVDLFCGCGGLSKGFEEA----GYNILVGVDFEQSALNTFSYNHNGAVGLRLDLSEPE 61 Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83 + D D+++ G PCQ FS G Sbjct: 62 SFDAIVDAVDGRLVDIIIGGPPCQGFSLTG 91 >gi|317051620|ref|YP_004112736.1| DNA-cytosine methyltransferase [Desulfurispirillum indicum S5] gi|316946704|gb|ADU66180.1| DNA-cytosine methyltransferase [Desulfurispirillum indicum S5] Length = 306 Score = 75.2 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 + DLF G+GG + +++ P +VK + N P+T D+ + Sbjct: 1 MNAIDLFAGLGGWSTGARMA----GIHILWAANHWPEAVKWHAKNHPDTAHACQDLHQAN 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 + +P HD+LLA CQ S+A Sbjct: 57 WEQVPSHDILLASPCCQGHSRA 78 >gi|296206220|ref|XP_002750112.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase isoform 1 [Callithrix jacchus] Length = 391 Score = 75.2 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYRFNFPHTQLLAKTIEGIT 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 Q+ D++L PCQPF++ G Sbjct: 62 LQEFDRLSFDMILMSPPCQPFTRIG 86 >gi|324993630|gb|EGC25549.1| modification methylase HgiDII [Streptococcus sanguinis SK405] gi|324995058|gb|EGC26971.1| modification methylase HgiDII [Streptococcus sanguinis SK678] gi|327462899|gb|EGF09220.1| modification methylase HgiDII [Streptococcus sanguinis SK1] Length = 352 Score = 75.2 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 13/88 (14%) Query: 2 LKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +KI DLFCG+GG+ ++Q + +I+ S Y+ N I DI +I Sbjct: 1 MKINAIDLFCGVGGLTYGVQQA----GINVVAGYDIDDKSKFAYEYNNDAKFILKDIKEI 56 Query: 60 KTQDI-----PDHD--VLLAGFPCQPFS 80 + +I D D +L+ PCQPFS Sbjct: 57 EDDEILALYPKDTDIKILIGCAPCQPFS 84 >gi|261838928|gb|ACX98693.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori 52] Length = 355 Score = 74.8 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPNTL-IFGDI- 56 KI DLFCG GG LE ++C + ++ T++ N N + + GDI Sbjct: 3 YKILDLFCGAGGFSTGLECLEEFDALIGLDC------DKQALITFENNHKNAIGVCGDIT 56 Query: 57 -AKIKTQDIP-----DHDVLLAGFPCQPFSQAG 83 +IK + I + ++++ G PCQ FS G Sbjct: 57 QTEIKEKVIKLAQTLEINMIIGGPPCQGFSNKG 89 >gi|311221492|gb|ADP76553.1| DNA methyltransferase [Helicobacter pylori] Length = 587 Score = 74.8 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPNTL-IFGDI- 56 KI DLFCG GG LE ++C + ++ T++ N N + + GDI Sbjct: 3 YKILDLFCGAGGFSAGLECLEEFDALIGLDC------DKQALITFENNHKNAIGVCGDIT 56 Query: 57 -AKIKTQDIP-----DHDVLLAGFPCQPFSQAG 83 +IK + I + ++++ G PCQ FS G Sbjct: 57 QTEIKEKVIKLAKKLEINMIIGGPPCQGFSNKG 89 >gi|226349837|ref|YP_002776950.1| modification methylase [Rhodococcus opacus B4] gi|226245752|dbj|BAH47019.1| modification methylase [Rhodococcus opacus B4] Length = 428 Score = 74.8 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 8/84 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK---I 59 + ++ G GG L LE+ + E++ + T + N P+ + GD+A Sbjct: 16 VVEICAGAGGQALGLEKA----GFSHKLAVELDTNACATLKLNRPDWDVEEGDVADPTVW 71 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K + D+L G PC PFS AG Sbjct: 72 KPSEHEGVDLLAGGVPCPPFSIAG 95 >gi|332217175|ref|XP_003257732.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase [Nomascus leucogenys] Length = 393 Score = 74.8 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 5/84 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIKT 61 ++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I Sbjct: 5 RVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITL 62 Query: 62 QDIP--DHDVLLAGFPCQPFSQAG 83 ++ D++L PCQPF++ G Sbjct: 63 EEFDRLSCDMILMSPPCQPFTRIG 86 >gi|315638243|ref|ZP_07893425.1| site-specific DNA-methyltransferase [Campylobacter upsaliensis JV21] gi|315481779|gb|EFU72401.1| site-specific DNA-methyltransferase [Campylobacter upsaliensis JV21] Length = 418 Score = 74.8 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 14/92 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-----DI 56 I + F G GG L Q ++++ + ++KT + N L DI Sbjct: 3 YNIVEFFVGAGGSHLGFMQ----EGFSTLYANDFDSNALKTLEHNNKKHLQNAILDSTDI 58 Query: 57 AKIKTQDIPD-----HDVLLAGFPCQPFSQAG 83 ++ +++ DV+ G C+ FS AG Sbjct: 59 TQLNPKELKKKVDSSVDVMFGGIVCKGFSLAG 90 >gi|240146838|ref|ZP_04745439.1| putative cytosine-specific methyltransferase protein [Roseburia intestinalis L1-82] gi|257201024|gb|EEU99308.1| putative cytosine-specific methyltransferase protein [Roseburia intestinalis L1-82] gi|291534422|emb|CBL07534.1| DNA-methyltransferase (dcm) [Roseburia intestinalis M50/1] gi|291541262|emb|CBL14373.1| DNA-methyltransferase (dcm) [Roseburia intestinalis XB6B4] Length = 411 Score = 74.8 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 22/100 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 D+F G GG+ L L + F+ E + + +T + N +T Sbjct: 4 FSYIDIFAGCGGLSLGLHNA----GWKGLFAIEKSKDAFETLKYNLIDTTQHFGWNEWLP 59 Query: 54 ---GDIAKIKTQ---DIPD----HDVLLAGFPCQPFSQAG 83 DI ++ ++ ++ +++ G PCQ FS AG Sbjct: 60 QTEHDINEVISKYRSELEKLAGTVTLVVGGPPCQGFSMAG 99 >gi|270012712|gb|EFA09160.1| DNA methyltransferase 2 [Tribolium castaneum] Length = 329 Score = 74.8 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++I +L+ GIGG+ L+ + ++ + +INP + Y+ NFP+ L+ ++ + Sbjct: 1 MEILELYSGIGGMHWALKVSGVEGTIK--AAVDINPTANSVYKHNFPHINLLNRNVQSLT 58 Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83 Q I + +L PCQPF++ G Sbjct: 59 PQFINKLGVNTILMSPPCQPFTRNG 83 >gi|155122046|gb|ABT13914.1| hypothetical protein MT325_m360R [Paramecium bursaria chlorella virus MT325] Length = 342 Score = 74.8 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 6/84 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML DLF GIGGI L VE E N + PN +F D+ Sbjct: 1 MLHAIDLFSGIGGITHGLRGI-----VEPIAYVEKNDDARGFLARKHPNVPVFDDVCTFD 55 Query: 61 TQD-IPDHDVLLAGFPCQPFSQAG 83 + D++ G+PC FS AG Sbjct: 56 ATPYLGKVDIITGGWPCTGFSTAG 79 >gi|61554791|gb|AAX46615.1| DNA methyltransferase 2 isoform a [Bos taurus] Length = 377 Score = 74.8 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ +L+ GIGG+ L ++ + + ++N + + Y+ NFP+T + I+ Sbjct: 4 LRALELYSGIGGMHQALRESCIPA--QVVAAVDVNTVANEVYKYNFPHTQLLA--KTIEG 59 Query: 62 QDIPDHD-----VLLAGFPCQPFSQAG 83 + + D ++L PCQPF++ G Sbjct: 60 ITLEEFDRLSFNMILMSPPCQPFTRIG 86 >gi|32441269|ref|NP_861528.1| tRNA (cytosine-5-)-methyltransferase [Bos taurus] gi|75046080|sp|Q7YS61|TRDMT_BOVIN RecName: Full=tRNA (cytosine-5-)-methyltransferase; AltName: Full=DNA (cytosine-5)-methyltransferase-like protein 2; Short=Dnmt2 gi|31074159|gb|AAP20550.1| DNA cytosine-5 methyltransferase 2 [Bos taurus] gi|296481442|gb|DAA23557.1| tRNA (cytosine-5-)-methyltransferase [Bos taurus] Length = 391 Score = 74.8 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ +L+ GIGG+ L ++ + + ++N + + Y+ NFP+T + I+ Sbjct: 4 LRALELYSGIGGMHQALRESCIPA--QVVAAVDVNTVANEVYKYNFPHTQLLA--KTIEG 59 Query: 62 QDIPDHD-----VLLAGFPCQPFSQAG 83 + + D ++L PCQPF++ G Sbjct: 60 ITLEEFDRLSFNMILMSPPCQPFTRIG 86 >gi|330958885|gb|EGH59145.1| cytosine-specific DNA methyltransferase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 458 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 LK + GI ++ +E + +EI P+ ++P T GD+ K Sbjct: 10 LKYGSVCSGI----EAATAAWHPLGMEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGA 65 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 + I DVL+ G PCQ FS AG Sbjct: 66 LVLAGKIEAPDVLVGGTPCQAFSVAG 91 >gi|301311774|ref|ZP_07217699.1| modification methylase BepI [Bacteroides sp. 20_3] gi|300830334|gb|EFK60979.1| modification methylase BepI [Bacteroides sp. 20_3] Length = 425 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 39/120 (32%), Gaps = 38/120 (31%) Query: 2 LKITDLFCGIGGIRLDLEQTF-------------------------NHRNVECFFSSEIN 36 L++ LF G GG+ L E F F+++I Sbjct: 14 LRVLSLFSGCGGMDLGFEGDFICHRKSISPQNTWVQEVIDEHWVRLQKNRFRTVFANDIL 73 Query: 37 PYSVKT---------YQANFPNTLIFGDIAKIK---TQDIPD-HDVLLAGFPCQPFSQAG 83 + Y N NT D+ K + P DV+ GFPCQ FS +G Sbjct: 74 KEAQTAWLQYMDRFGYDKNVYNTKSIVDLVKEHRAGKKVFPKNIDVVTGGFPCQDFSVSG 133 >gi|297618103|ref|YP_003703262.1| DNA-cytosine methyltransferase [Syntrophothermus lipocalidus DSM 12680] gi|297145940|gb|ADI02697.1| DNA-cytosine methyltransferase [Syntrophothermus lipocalidus DSM 12680] Length = 388 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 25/100 (25%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------------PNTL 51 +F G GG L +E E ++I+ +S +T ++N + Sbjct: 8 ISIFSGAGGFDLGIEAA----GFETRLCTDIDYHSCRTLRSNRRLGKETGKHSFLQNAVV 63 Query: 52 IFGDIAKIKTQDI--------PDHDVLLAGFPCQPFSQAG 83 + DI K+ T+DI +++ G PCQ FS G Sbjct: 64 LQRDIRKLNTKDILRAARLDRGKVSLVIGGPPCQSFSVFG 103 >gi|255013132|ref|ZP_05285258.1| site-specific DNA methylase [Bacteroides sp. 2_1_7] Length = 423 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 39/120 (32%), Gaps = 38/120 (31%) Query: 2 LKITDLFCGIGGIRLDLEQTF-------------------------NHRNVECFFSSEIN 36 L++ LF G GG+ L E F F+++I Sbjct: 12 LRVLSLFSGCGGMDLGFEGDFICHRKSISPQSTWVQEVIDEHWVRLQKNRFRTVFANDIL 71 Query: 37 PYSVKT---------YQANFPNTLIFGDIAKIK---TQDIPD-HDVLLAGFPCQPFSQAG 83 + Y N NT D+ K + P DV+ GFPCQ FS +G Sbjct: 72 KEAQTAWLQYMDRFGYDKNVYNTKSIVDLVKEHRAGKKVFPKNIDVVTGGFPCQDFSVSG 131 >gi|150009588|ref|YP_001304331.1| site-specific DNA methylase [Parabacteroides distasonis ATCC 8503] gi|256838307|ref|ZP_05543817.1| site-specific DNA methylase [Parabacteroides sp. D13] gi|149938012|gb|ABR44709.1| site-specific DNA methylase [Parabacteroides distasonis ATCC 8503] gi|256739226|gb|EEU52550.1| site-specific DNA methylase [Parabacteroides sp. D13] Length = 425 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 39/120 (32%), Gaps = 38/120 (31%) Query: 2 LKITDLFCGIGGIRLDLEQTF-------------------------NHRNVECFFSSEIN 36 L++ LF G GG+ L E F F+++I Sbjct: 14 LRVLSLFSGCGGMDLGFEGDFICHRKSISPQSTWVQEVIDEHWVRLQKNRFRTVFANDIL 73 Query: 37 PYSVKT---------YQANFPNTLIFGDIAKIK---TQDIPD-HDVLLAGFPCQPFSQAG 83 + Y N NT D+ K + P DV+ GFPCQ FS +G Sbjct: 74 KEAQTAWLQYMDRFGYDKNVYNTKSIVDLVKEHRAGKKVFPKNIDVVTGGFPCQDFSVSG 133 >gi|296503162|ref|YP_003664862.1| type II restriction-modification system methylation subunit [Bacillus thuringiensis BMB171] gi|296324214|gb|ADH07142.1| Type II restriction-modification system methylation subunit [Bacillus thuringiensis BMB171] Length = 251 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DL GI GI + + + EI ++ K + N+PN IF D+ K+ Sbjct: 1 MKMLDLCSGIAGISMAADWA----GINTAAFCEIEEFNQKVLRKNYPNIPIFPDLYKLTK 56 Query: 62 QDIPD--HD-----VLLAGFPCQPFSQAG 83 Q + D D V+ AG+PCQ S AG Sbjct: 57 QSLIDGGVDVDSIGVISAGYPCQGESMAG 85 >gi|15644682|ref|NP_206852.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori 26695] gi|2313124|gb|AAD07117.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori 26695] Length = 355 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPNTL-IFGDI- 56 KI DLFCG GG LE ++C + ++ T++ N N + + GDI Sbjct: 3 YKILDLFCGAGGFSAGLECLEEFDALIGLDC------DKQALITFENNHKNAIGVCGDIT 56 Query: 57 -AKIKTQDIP-----DHDVLLAGFPCQPFSQAG 83 +IK + I + ++++ G PCQ FS G Sbjct: 57 QTEIKEKVIKLAKKLEINMIIGGPPCQGFSNKG 89 >gi|281420730|ref|ZP_06251729.1| DNA (cytosine-5-)-methyltransferase [Prevotella copri DSM 18205] gi|281405022|gb|EFB35702.1| DNA (cytosine-5-)-methyltransferase [Prevotella copri DSM 18205] Length = 432 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 5/84 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKIK 60 +I LF GIG I ++ N + F+ +I P +Y AN+ F DI + Sbjct: 58 RIGTLFSGIGAIEHAFQRLG--LNHKIVFAGDIEPKCKISYFANYKINEEDWFTDIREFD 115 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 D ++ G PCQ FS G Sbjct: 116 ATKYKGKVDFIVGGAPCQAFSMVG 139 >gi|302551692|ref|ZP_07304034.1| modification methylase NaeI [Streptomyces viridochromogenes DSM 40736] gi|302469310|gb|EFL32403.1| modification methylase NaeI [Streptomyces viridochromogenes DSM 40736] Length = 415 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 + ++ G GG L LE + + E++ +V T +AN ++ GD+A Sbjct: 1 MSAVEICAGAGGQSLGLELA----GFDHAVAVELDENAVNTLRANRDWRVVHGDVADEDL 56 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 K D D+L G PC PFS AG Sbjct: 57 WKPGKYIDIDLLAGGVPCPPFSIAG 81 >gi|269219712|ref|ZP_06163566.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. oral taxon 848 str. F0332] gi|269210954|gb|EEZ77294.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. oral taxon 848 str. F0332] Length = 310 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 9/85 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAKI 59 + + F GIG R+ LE ++++ +P Y+A F + GDI KI Sbjct: 14 VLEFFAGIGLARIGLEAA----GFRVTWANDFDPDKKAMYEAQFEDAGDHVFALGDIGKI 69 Query: 60 KTQDIP-DHDVLLAGFPCQPFSQAG 83 ++P D + A PC S AG Sbjct: 70 TADELPRDAALAWASSPCTDLSLAG 94 >gi|167997277|ref|XP_001751345.1| predicted protein [Physcomitrella patens subsp. patens] gi|162697326|gb|EDQ83662.1| predicted protein [Physcomitrella patens subsp. patens] Length = 812 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF G+GGI L + +SSE+ +++ ++ P+ GD+ K+ Sbjct: 148 VLSLFDGLGGIWQALTNLGIPFSG---YSSEVLAPAIQVVKSRHPHVKHVGDVRKLNLSA 204 Query: 64 IPD-HDVLLAGFPCQPFSQAG 83 IP+ D+++ GFPCQ S G Sbjct: 205 IPEKVDLVVGGFPCQDLSIMG 225 >gi|325962428|ref|YP_004240334.1| DNA-methyltransferase Dcm [Arthrobacter phenanthrenivorans Sphe3] gi|323468515|gb|ADX72200.1| DNA-methyltransferase Dcm [Arthrobacter phenanthrenivorans Sphe3] Length = 454 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 37/113 (32%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 +K DLF G GG+ L +E+ + + E + + +T+ N DI + Sbjct: 1 MKYVDLFSGCGGLSLGIERA----GGQLVLAVEKSDMAARTFHHNLLGDA--SDIRQWER 54 Query: 59 --------------------------IKTQDIP--DHDVLLAGFPCQPFSQAG 83 + +D+ D+++ G PCQ FS AG Sbjct: 55 YVASSEDNQIASRLLVRELSVLLANTVAMEDLRANGLDLVVGGPPCQGFSLAG 107 >gi|210134246|ref|YP_002300685.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12] gi|210132214|gb|ACJ07205.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12] Length = 355 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPNTL-IFGDIA 57 KI DLFCG GG LE ++C + ++ T++ N N + + GDI Sbjct: 3 YKILDLFCGAGGFSAGLECLEEFDALIGLDC------DKQALITFENNHKNAIGVCGDIT 56 Query: 58 K--IKTQDIP-----DHDVLLAGFPCQPFSQAG 83 + IK + I + ++++ G PCQ FS G Sbjct: 57 QAAIKEKVIKLAQKLEINMIIGGPPCQGFSNKG 89 >gi|188526860|ref|YP_001909547.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori Shi470] gi|188143100|gb|ACD47517.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori Shi470] Length = 355 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPNTL-IFGDIA 57 KI DLFCG GG LE ++C + ++ T++ N N + I GDI Sbjct: 3 YKILDLFCGAGGFSAGLECLKEFDALIGLDC------DKQALITFENNHKNAMGICGDIT 56 Query: 58 --KIKTQDIP-----DHDVLLAGFPCQPFSQAG 83 +IK + I + ++++ G PCQ FS G Sbjct: 57 QAEIKEKVIKLAQTLEINMIIGGPPCQGFSNKG 89 >gi|91089179|ref|XP_974235.1| PREDICTED: similar to DNA cytosine-5 methyltransferase [Tribolium castaneum] Length = 579 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++I +L+ GIGG+ L+ + ++ + +INP + Y+ NFP+ L+ ++ + Sbjct: 251 MEILELYSGIGGMHWALKVSGVEGTIK--AAVDINPTANSVYKHNFPHINLLNRNVQSLT 308 Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83 Q I + +L PCQPF++ G Sbjct: 309 PQFINKLGVNTILMSPPCQPFTRNG 333 >gi|220926789|ref|YP_002502091.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060] gi|219951396|gb|ACL61788.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060] Length = 358 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 10/86 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + DLFCG GG+ L ++ S + +P +Y N P + LI D+A + + Sbjct: 2 LIDLFCGCGGLSLGARSA----GLKVTLSVDNDPILTSSYTFNHPQSRLILADVADLSGR 57 Query: 63 DIPDH-----DVLLAGFPCQPFSQAG 83 + D ++ G PCQ FS+ G Sbjct: 58 YLRRAAGGYIDGIVGGPPCQGFSEIG 83 >gi|168485680|ref|ZP_02710188.1| modification methylase HaeIII (Cytosine-specificmethyltransferase HaeIII) (M.HaeIII) [Streptococcus pneumoniae CDC1087-00] gi|183571278|gb|EDT91806.1| modification methylase HaeIII (Cytosine-specificmethyltransferase HaeIII) (M.HaeIII) [Streptococcus pneumoniae CDC1087-00] Length = 363 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQD 63 DLF G GG L+++ ++ + EI+ +VKTY+ N P +I DI + + Sbjct: 7 IDLFSGAGGTTSGLKKS----GIDVQVAVEIDSVAVKTYKLNNPEVSVIDKDINVVSGDE 62 Query: 64 IP-----DHD---VLLAGFPCQPFSQAG 83 + D D +L+A PCQ FS G Sbjct: 63 VKEYLKIDTDDKLMLVACPPCQGFSTIG 90 >gi|168210881|ref|ZP_02636506.1| Dcm [Clostridium perfringens B str. ATCC 3626] gi|209947599|ref|YP_002291106.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens] gi|170711042|gb|EDT23224.1| Dcm [Clostridium perfringens B str. ATCC 3626] gi|209910390|dbj|BAG75479.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens] Length = 339 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANF--PNTLIFGDIA 57 +K+ LF GIG E+ ++N+E E + Y+ Y F D+ Sbjct: 1 MKVLSLFSGIG----AFERAIENKNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVN 56 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + D D++ GFPC S AG Sbjct: 57 WVDGTQFKDIDLVTYGFPCVDISLAG 82 >gi|162461489|ref|NP_001105173.1| DNA methyl transferase4 [Zea mays] gi|13936240|gb|AAK40306.1| DNA methyltransferase ZMET4 [Zea mays] gi|194697288|gb|ACF82728.1| unknown [Zea mays] Length = 357 Score = 74.8 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ + + GIGG+R L + E + +IN + Y+ NF + G+I + Sbjct: 8 RVLEFYSGIGGLRYSLMASGVRA--EVVEAFDINDVANDVYEHNFGHRPCQGNIQTLTAS 65 Query: 63 DIP--DHDVLLAGFPCQPFSQAG 83 D+ L PCQP+++ G Sbjct: 66 DLDKYKAHAWLLSPPCQPYTRQG 88 >gi|157953548|ref|YP_001498439.1| hypothetical protein AR158_C358L [Paramecium bursaria Chlorella virus AR158] gi|156068196|gb|ABU43903.1| hypothetical protein AR158_C358L [Paramecium bursaria Chlorella virus AR158] Length = 370 Score = 74.4 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 10/85 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNV-ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ML +LF GIGGI L R + E N + + + IF D+ Sbjct: 1 MLDTLELFAGIGGITYGL------RGFAKPAAFVEWNEEAKNVLKRH--KVPIFDDVTTF 52 Query: 60 KTQDIPD-HDVLLAGFPCQPFSQAG 83 D D++ AG+PC FS AG Sbjct: 53 DATPFKDKVDMVSAGWPCTGFSTAG 77 >gi|239622757|ref|ZP_04665788.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239514754|gb|EEQ54621.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 390 Score = 74.4 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 10/85 (11%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDIAKI 59 + F GIG RL LE+ +S++I+ + Y+ F N TLI GD+ ++ Sbjct: 19 LEFFAGIGLARLGLEEA----GFHVAWSNDIDHAKCQMYRNQFGNNEQEHTLIEGDMGEL 74 Query: 60 KTQDIP-DHDVLLAGFPCQPFSQAG 83 D+P D + PC S AG Sbjct: 75 HGSDLPHDISIAWGSSPCTDISLAG 99 >gi|213968059|ref|ZP_03396204.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato T1] gi|213927039|gb|EEB60589.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato T1] Length = 584 Score = 74.4 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 LK + GI ++ +E + +EI+P+ ++P T GD+ K Sbjct: 10 LKYGSVCSGI----EAATAAWHPLGMEPVWFAEIDPFPSAVLAHHYPRTPNLGDMTKLGA 65 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 + I DVL+ G PCQ FS AG Sbjct: 66 LVLAGKIDAPDVLVGGTPCQAFSVAG 91 >gi|218782541|ref|YP_002433859.1| DNA-cytosine methyltransferase [Desulfatibacillum alkenivorans AK-01] gi|218763925|gb|ACL06391.1| DNA-cytosine methyltransferase [Desulfatibacillum alkenivorans AK-01] Length = 381 Score = 74.4 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 + + F G G L L +C + +E ++Y+ N D+ + Sbjct: 5 FRFYEFFAGGGMASLGL-----GPQWKCVYVNEWCKKKARSYKINHSGAPRV-DVRDVAV 58 Query: 60 -KTQDIPD-HDVLLAGFPCQPFSQAG 83 D+ + D+ A FPCQ S AG Sbjct: 59 ATPADLRENADLAWASFPCQDLSLAG 84 >gi|168206039|ref|ZP_02632044.1| Dcm [Clostridium perfringens E str. JGS1987] gi|170662518|gb|EDT15201.1| Dcm [Clostridium perfringens E str. JGS1987] Length = 339 Score = 74.4 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANF--PNTLIFGDIA 57 +K+ LF GIG E+ ++N+E E + Y+ Y F D+ Sbjct: 1 MKVLSLFSGIG----AFERAIENKNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVN 56 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + D D++ GFPC S AG Sbjct: 57 CVDGTHFKDIDLVTYGFPCTDISLAG 82 >gi|326789360|ref|YP_004307181.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427] gi|326540124|gb|ADZ81983.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427] Length = 446 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 15/91 (16%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNT--LIFGDIA 57 + D+F G GG+ L ++ + E+ P +VKT N F I GDI Sbjct: 6 VIDIFSGCGGLALGFQKA----GFKITHGIELMPEAVKTVSYNIDWRFGEETSHICGDIT 61 Query: 58 KIKTQDIPDH---D--VLLAGFPCQPFSQAG 83 ++ T + D +++ G PCQ +S AG Sbjct: 62 QMDTSIFKERIGKDGCIVIGGPPCQAYSLAG 92 >gi|281420197|ref|ZP_06251196.1| modification methylase HgiDII [Prevotella copri DSM 18205] gi|281405692|gb|EFB36372.1| modification methylase HgiDII [Prevotella copri DSM 18205] Length = 353 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 16/92 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---FPNT-LIFGDIA 57 K D FCG GG+ L L Q + +S +I ++ T +AN F N DI Sbjct: 5 YKCIDCFCGAGGLCLGLIQA----GFDILYSFDIEAKAIATIKANPEYFKNHKAETRDIY 60 Query: 58 KIKTQDI--------PDHDVLLAGFPCQPFSQ 81 ++T ++ + D+L G PCQ FS Sbjct: 61 DVETAELLKSLNLKSGELDLLAGGPPCQGFSV 92 >gi|18700048|gb|AAL03949.1| DNA methyltransferase Bse634IM [Geobacillus stearothermophilus] Length = 387 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 12/89 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY------QANFP-NTLIF 53 M+K+ LF G G + L + + + +EI P + + + N + + Sbjct: 1 MIKVASLFSGAGFLDLGFAE----NGFDIVWGAEIVPEFSRAHNYNMRLRYNHDVDRIHT 56 Query: 54 GDIAKIKTQDIP-DHDVLLAGFPCQPFSQ 81 DI + D+P + ++ G PCQ FS Sbjct: 57 VDIVNVSPMDMPQNIRGIIGGPPCQDFSI 85 >gi|298373979|ref|ZP_06983937.1| modification methylase BepI [Bacteroides sp. 3_1_19] gi|298268347|gb|EFI10002.1| modification methylase BepI [Bacteroides sp. 3_1_19] Length = 425 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 39/120 (32%), Gaps = 38/120 (31%) Query: 2 LKITDLFCGIGGIRLDLEQTF-------------------------NHRNVECFFSSEIN 36 L++ LF G GG+ L E F F+++I Sbjct: 14 LRVLSLFSGCGGMDLGFEGDFICHRKSISPQSSWIQEVIDEHWVRLQRNRFRTVFANDIL 73 Query: 37 PYSVKT---------YQANFPNTLIFGDIAKIK---TQDIPD-HDVLLAGFPCQPFSQAG 83 + Y N NT D+ K + P DV+ GFPCQ FS +G Sbjct: 74 KEAQTAWLQYMDRFGYDKNVYNTKSIVDLVKEHRAGKKVFPKNIDVVTGGFPCQDFSVSG 133 >gi|262383127|ref|ZP_06076264.1| site-specific DNA methylase [Bacteroides sp. 2_1_33B] gi|262296005|gb|EEY83936.1| site-specific DNA methylase [Bacteroides sp. 2_1_33B] Length = 423 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 39/120 (32%), Gaps = 38/120 (31%) Query: 2 LKITDLFCGIGGIRLDLEQTF-------------------------NHRNVECFFSSEIN 36 L++ LF G GG+ L E F F+++I Sbjct: 12 LRVLSLFSGCGGMDLGFEGDFICHRKSISPQSSWVQEVINEHWVRLQRNRFRTVFANDIL 71 Query: 37 PYSVKT---------YQANFPNTLIFGDIAKIK---TQDIPD-HDVLLAGFPCQPFSQAG 83 + Y N NT D+ K + P DV+ GFPCQ FS +G Sbjct: 72 KEAQTAWLQYMDRFGYDKNVYNTKSIVDLVKEHRAGKKVFPKNIDVVTGGFPCQDFSVSG 131 >gi|258511120|ref|YP_003184554.1| DNA-cytosine methyltransferase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477846|gb|ACV58165.1| DNA-cytosine methyltransferase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 395 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 16/92 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----------FPNTL 51 ++ +LF G GG+ + + E + Y+ T + N +P + Sbjct: 1 MRSVELFVGAGGLAMGISNA----GFRHVGLYEWDRYACDTIRFNKERNVGPVRDWP--I 54 Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D+ + ++L G PCQPFS G Sbjct: 55 YQLDVRSVDFTQYRGIELLAGGPPCQPFSLGG 86 >gi|317488614|ref|ZP_07947157.1| C-5 cytosine-specific DNA methylase [Eggerthella sp. 1_3_56FAA] gi|316912266|gb|EFV33832.1| C-5 cytosine-specific DNA methylase [Eggerthella sp. 1_3_56FAA] Length = 308 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 9/84 (10%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ-- 62 DLFCG GG+ E + ++ TY AN P+ D+ + Sbjct: 10 IDLFCGCGGLTAGFRAA----GFENLVGFDNWQAALDTYSANNPDQGEMLDLGDLSASLE 65 Query: 63 ---DIPDHDVLLAGFPCQPFSQAG 83 + D ++ G PCQ FS AG Sbjct: 66 RLAEYKGIDGVIGGPPCQDFSSAG 89 >gi|91203606|emb|CAJ71259.1| similar to HhaI Dna (cytosine-C5-)-methyltransferase [Candidatus Kuenenia stuttgartiensis] Length = 416 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 38/127 (29%), Gaps = 49/127 (38%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ----ANFPNTLIFGDIA 57 ++ DLF G GG ++ E E++P + T + ++ DI Sbjct: 1 MRYIDLFAGAGGFSEGFKRA----GFEPVAFVEVDPAACFTLKTRHSYHYLKENNKSDIY 56 Query: 58 ------KIKTQDI-----------------------------------PDHDVLLAGFPC 76 +I + + D DV++ G PC Sbjct: 57 IKYLKGEINREQLYSIVPSHILESVINLSISDENNSKIFQIVEKLIGRKDIDVIVGGPPC 116 Query: 77 QPFSQAG 83 Q +S G Sbjct: 117 QAYSLVG 123 >gi|57867437|ref|YP_189088.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis RP62A] gi|57638095|gb|AAW54883.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis RP62A] Length = 335 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAK 58 ++K+ +LF G+G + L E SE + + + N + GD+ Sbjct: 4 LIKVLELFSGVGSFSISLNTLGIEH--EIVGFSETRKTATQLFCKLHNKKESENLGDVRN 61 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + +D+ D D+L+ G PCQ F++AG Sbjct: 62 VSAKDL-DVDLLVFGSPCQSFTRAG 85 >gi|157952715|ref|YP_001497607.1| hypothetical protein NY2A_B411L [Paramecium bursaria Chlorella virus NY2A] gi|155122942|gb|ABT14810.1| hypothetical protein NY2A_B411L [Paramecium bursaria Chlorella virus NY2A] Length = 370 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 10/85 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNV-ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 ML +LF GIGGI L R + E N + + + IF D+ Sbjct: 1 MLDTLELFAGIGGITYGL------RGFAKPAAFVEWNEEAKNVLKRH--KVPIFDDVTTF 52 Query: 60 KTQDIPD-HDVLLAGFPCQPFSQAG 83 D D++ AG+PC FS AG Sbjct: 53 DATPFKDKVDMVSAGWPCTGFSTAG 77 >gi|251788110|ref|YP_003002831.1| DNA-cytosine methyltransferase [Dickeya zeae Ech1591] gi|247536731|gb|ACT05352.1| DNA-cytosine methyltransferase [Dickeya zeae Ech1591] Length = 490 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 8/87 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML+ + GI + + ++ + SE++P+ +P+ GDI +I Sbjct: 9 MLQYGSVCSGI----EAVSLAWEPLGLQAAWFSEVDPFPNAVLAHRYPHIPNLGDITRIA 64 Query: 61 TQ----DIPDHDVLLAGFPCQPFSQAG 83 + ++ D+L+ G PCQ FS AG Sbjct: 65 DRVQNGEVTAPDILVGGTPCQAFSIAG 91 >gi|73948984|ref|XP_856563.1| PREDICTED: similar to DNA methyltransferase 2 isoform c isoform 3 [Canis familiaris] Length = 345 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ +L+ GIGG+ L ++ + + ++N + + Y+ NFP+T + I+ Sbjct: 4 LRVLELYSGIGGMHQALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLA--KTIEG 59 Query: 62 QDIPDHD-----VLLAGFPCQPFSQ 81 + + D ++L PCQPF++ Sbjct: 60 ITLEEFDKLSFNMILMSPPCQPFTR 84 >gi|57040472|ref|XP_544244.1| PREDICTED: similar to DNA methyltransferase 2 isoform b isoform 1 [Canis familiaris] Length = 367 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ +L+ GIGG+ L ++ + + ++N + + Y+ NFP+T + I+ Sbjct: 4 LRVLELYSGIGGMHQALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLA--KTIEG 59 Query: 62 QDIPDHD-----VLLAGFPCQPFSQ 81 + + D ++L PCQPF++ Sbjct: 60 ITLEEFDKLSFNMILMSPPCQPFTR 84 >gi|119386086|ref|YP_917141.1| C-5 cytosine-specific DNA methylase [Paracoccus denitrificans PD1222] gi|119376681|gb|ABL71445.1| C-5 cytosine-specific DNA methylase [Paracoccus denitrificans PD1222] Length = 502 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 10/85 (11%) Query: 4 ITDLFCGI-GGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + DLF G GG L L + + EI + Y NFP+ ++ DI + Sbjct: 14 VLDLFSGAAGGWSLGLHRA----GFMTIAACEIVEWRRILYSENFPHVRLYADIRDLTAT 69 Query: 63 DIPD-----HDVLLAGFPCQPFSQA 82 + D+++ PCQ S A Sbjct: 70 RLVSDLGCLPDIVVGSPPCQDISSA 94 >gi|229066883|ref|ZP_04201078.1| Prophage LambdaBa01, C-5 cytosine-specific DNA methylase [Bacillus cereus AH603] gi|228715383|gb|EEL67217.1| Prophage LambdaBa01, C-5 cytosine-specific DNA methylase [Bacillus cereus AH603] Length = 251 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DL GI GI + + +E EI ++ K + N+PN IF D+ K+ Sbjct: 1 MKMLDLCSGIAGISMAADWA----GIETAAFCEIEEFNQKVLRKNYPNIPIFPDLYKLAK 56 Query: 62 QDIPD--HD-----VLLAGFPCQPFSQAG 83 Q + D D V+ AG+PCQ S G Sbjct: 57 QSLIDGGVDVDSIGVISAGYPCQGESLVG 85 >gi|332023953|gb|EGI64171.1| DNA (cytosine-5)-methyltransferase PliMCI [Acromyrmex echinatior] Length = 1449 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L++ D+F G GG+ + Q E ++ E + Y+ N P T++F Sbjct: 942 LRMLDIFAGCGGLSEGMHQAGVA---ESLWAIEKESSAANAYRLNNPKTMVFSEDCNKLL 998 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 GD Q +P D ++L G PCQ FS Sbjct: 999 QRVMDGDRVDNNGQKLPQKGDVELLCGGPPCQGFS 1033 >gi|260806879|ref|XP_002598311.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae] gi|229283583|gb|EEN54323.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae] Length = 1275 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 L++ D+F G GG+ Q + ++ E+ + + Y+ N P+ +F D I Sbjct: 799 LRMLDVFAGCGGLSEGFHQAGIADS---KWAVEVMEPAAQAYRLNNPDCTVFTDDCNILL 855 Query: 60 -----------KTQDIP---DHDVLLAGFPCQPFS 80 Q +P D ++L G PCQ FS Sbjct: 856 KLVMEGATTNSTGQRLPQKGDVELLCGGPPCQGFS 890 >gi|110799020|ref|YP_694603.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC 13124] gi|110673667|gb|ABG82654.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC 13124] Length = 361 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 15/94 (15%) Query: 1 MLKI-TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK 58 M KI F G GG+ + + + + S E+ T + N P ++ GDI Sbjct: 1 MSKIAISFFAGAGGLDIGIHEA----GFDVKLSVELEEKYCVTLKQNNPTFNVVNGDIMD 56 Query: 59 IKTQDI---------PDHDVLLAGFPCQPFSQAG 83 + I + D++ G PCQ FS AG Sbjct: 57 YSKEKIYSDAGLNYNDEIDLIFGGSPCQSFSTAG 90 >gi|38640332|ref|NP_944253.1| Bcep22gp25 [Burkholderia phage Bcep22] gi|33860399|gb|AAQ54959.1| Bcep22gp25 [Burkholderia phage Bcep22] Length = 205 Score = 74.4 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 ++ + GI ++ + + +EI + ++P+ GD+ KI Sbjct: 1 MRYGSVCSGI----EAATVAWHPLGWKPAWFAEIEKFPSAVLAHHYPDVPNLGDMTKITR 56 Query: 61 ---TQDIPDHDVLLAGFPCQPFSQAG 83 +++ DVL+ G PCQ FS AG Sbjct: 57 AVLAREVEVPDVLVGGTPCQAFSLAG 82 >gi|72255517|ref|NP_001026813.1| tRNA (cytosine-5-)-methyltransferase [Rattus norvegicus] gi|115311703|sp|Q4G073|TRDMT_RAT RecName: Full=tRNA (cytosine-5-)-methyltransferase; AltName: Full=DNA (cytosine-5)-methyltransferase-like protein 2; Short=Dnmt2 gi|71051331|gb|AAH98700.1| TRNA aspartic acid methyltransferase 1 [Rattus norvegicus] gi|149021112|gb|EDL78719.1| DNA methyltransferase 2 [Rattus norvegicus] Length = 391 Score = 74.0 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ +L+ GIGG+ L ++ + +++ + + Y+ NFP+T + I+ Sbjct: 4 LRVLELYSGIGGMHHALRES--RVPAHVVAAIDVSTVANEVYKHNFPHTHLLA--KTIEG 59 Query: 62 QDIPDHD-----VLLAGFPCQPFSQAG 83 + + D ++L PCQPF++ G Sbjct: 60 ISLEEFDKLSFNMILMSPPCQPFTRIG 86 >gi|296170222|ref|ZP_06851815.1| DNA (cytosine-5-)-methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895098|gb|EFG74816.1| DNA (cytosine-5-)-methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 388 Score = 74.0 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 9/86 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAK 58 K + F GIG R+ LE+ + ++++ P Y F +T GDI K Sbjct: 13 KAIEFFAGIGLARMGLEKA----GFQVTWANDYEPDKRAMYVGQFGESEGHTFALGDIGK 68 Query: 59 IKTQDIP-DHDVLLAGFPCQPFSQAG 83 +K D+P D + A PC S AG Sbjct: 69 VKAADLPTDAALAWASSPCTDLSLAG 94 >gi|295114912|emb|CBL35759.1| Site-specific DNA methylase [butyrate-producing bacterium SM4/1] Length = 217 Score = 74.0 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 18/97 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFG----- 54 +++ DLFCG GG+ L + + + ++++P +++ Y+ NF + Sbjct: 65 IRVVDLFCGCGGMSLGIAEACRALDYRFVPVLGADMDPVALQVYKENFKPHHVISEPIEN 124 Query: 55 --------DIAKIKTQDIP---DHDVLLAGFPCQPFS 80 +I++ + I + D+L+ G PCQ S Sbjct: 125 QIDSEIGAEISEAEKSFINLVGEVDILIGGPPCQGNS 161 >gi|256390614|ref|YP_003112178.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928] gi|256356840|gb|ACU70337.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928] Length = 419 Score = 74.0 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAKIK 60 +LF G GG+ L + + + +E P + +T + N LI GDIA Sbjct: 23 VELFSGGGGLALAMHRA----GFQHLMCNEFAPRACETLRMNSEALGRPQLIEGDIATAV 78 Query: 61 TQD-----IPDHDVLLAGFPCQPFSQAG 83 T + DV+ G PCQPFS G Sbjct: 79 TDERLAELTGKVDVVAGGPPCQPFSLGG 106 >gi|288576182|ref|ZP_05978340.2| DNA (cytosine-5-)-methyltransferase [Neisseria mucosa ATCC 25996] gi|288566126|gb|EFC87686.1| DNA (cytosine-5-)-methyltransferase [Neisseria mucosa ATCC 25996] Length = 406 Score = 74.0 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIA 57 +++ +F GIG +EQ F + N F+ +I+P+ K+Y N+ DI Sbjct: 33 IRLATVFSGIG----AVEQAFYRLNLNHTIVFAGDIDPHVKKSYLGNYQLDEGFWHDDIT 88 Query: 58 KIKTQDIPD-HDVLLAGFPCQPFSQAG 83 + + + D+L+ G PCQ FS G Sbjct: 89 QFDARKFRNQVDILVGGSPCQAFSMVG 115 >gi|145610006|ref|XP_366719.2| hypothetical protein MGG_02795 [Magnaporthe oryzae 70-15] gi|145017391|gb|EDK01754.1| hypothetical protein MGG_02795 [Magnaporthe oryzae 70-15] Length = 892 Score = 74.0 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAK-IKT 61 D+FCG GG ++ E ++ TY+ NFP +F GDI ++ Sbjct: 470 FGDMFCGAGGASQGARAAGFRLG----YAVEHWNHAAATYRHNFPEVNLFEGDIFDFLQR 525 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 D+ D+L PCQ +S A Sbjct: 526 NDLDFVDILHLSPPCQYWSPA 546 >gi|291402254|ref|XP_002717405.1| PREDICTED: tRNA aspartic acid methyltransferase 1 [Oryctolagus cuniculus] Length = 367 Score = 74.0 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ +L+ GIGG+ L+++ + + ++N + + Y+ NFP+TL+ I+ Sbjct: 4 LRVLELYSGIGGMHHALKESCVPA--QVVAAIDVNTVANEVYEYNFPHTLLLA--KTIEG 59 Query: 62 QDIPDHD-----VLLAGFPCQPFSQ 81 + + D ++L PCQPF++ Sbjct: 60 ITLEEFDKLSFNMILMSPPCQPFTR 84 >gi|224437470|ref|ZP_03658432.1| site-specific DNA-methyltransferase [Helicobacter cinaedi CCUG 18818] Length = 418 Score = 74.0 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 14/91 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-----DIA 57 + + F G GG L Q ++++ + ++KT + N L DI Sbjct: 4 NVVEFFVGAGGSHLGFMQ----EGFSTLYANDFDSNALKTLEYNNKKHLQNAILDSTDIT 59 Query: 58 KIKTQDIPD-----HDVLLAGFPCQPFSQAG 83 ++ +++ DV+ G C+ FS AG Sbjct: 60 QLNPKELKKKLDSSVDVMFGGIVCKGFSLAG 90 >gi|302531233|ref|ZP_07283575.1| DNA-cytosine methyltransferase [Streptomyces sp. AA4] gi|302440128|gb|EFL11944.1| DNA-cytosine methyltransferase [Streptomyces sp. AA4] Length = 371 Score = 74.0 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 9/84 (10%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAKIK 60 + F GIG +RL LE + +S++I P Y+A+F + + GD+A ++ Sbjct: 10 AEFFAGIGLVRLGLEPA----GFDVAWSNDIEPAKQAMYEAHFNDQGAHEYVLGDVAALR 65 Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83 D+P + A FPC S AG Sbjct: 66 GADLPAGLSLAWASFPCTDLSLAG 89 >gi|119385904|ref|YP_916959.1| C-5 cytosine-specific DNA methylase [Paracoccus denitrificans PD1222] gi|119376499|gb|ABL71263.1| C-5 cytosine-specific DNA methylase [Paracoccus denitrificans PD1222] Length = 495 Score = 74.0 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 14/89 (15%) Query: 2 LKITDLFCGI-GGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 L++ DLF G GG L L + + EI + Y NFP+ + D+ + Sbjct: 12 LRVLDLFSGAAGGWSLGLHRA----GFVTVAACEIVAWRRILYSENFPHVRLHEDVRTLT 67 Query: 61 TQ-------DIPDHDVLLAGFPCQPFSQA 82 +P+ +++ PCQ S A Sbjct: 68 AARLVSDLGGLPE--IIVGSPPCQDISSA 94 >gi|170754579|ref|YP_001781640.1| DNA-cytosine methyltransferase [Clostridium botulinum B1 str. Okra] gi|169119791|gb|ACA43627.1| DNA-cytosine methyltransferase [Clostridium botulinum B1 str. Okra] Length = 444 Score = 74.0 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 39/119 (32%), Gaps = 40/119 (33%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--------- 51 M DLF G GG+ + + + E++ +VKTY N + Sbjct: 1 MYTYIDLFAGPGGLCTGFKNA----GFKPLIAVEMSDNTVKTYARNHDAEIYKLEELIYN 56 Query: 52 -----------------IFGDIAKIKTQDIPD----------HDVLLAGFPCQPFSQAG 83 I GDI + I + DV+ G PC+ FS AG Sbjct: 57 KGKLENILNIENNRTALIHGDIRLVDNDIIKEILHKKFKVDSVDVVAGGPPCESFSMAG 115 >gi|166366114|ref|YP_001658387.1| cytosine-specific modification DNA methylase [Microcystis aeruginosa NIES-843] gi|166088487|dbj|BAG03195.1| cytosine-specific modification DNA methylase [Microcystis aeruginosa NIES-843] Length = 431 Score = 74.0 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 41/122 (33%), Gaps = 44/122 (36%) Query: 3 KITDLFCGIGGIRLDLEQTFN--------------------------HRNVECFFSSEIN 36 ++ LF G GG+ L LE F E F+++I Sbjct: 7 RVLSLFSGCGGMDLGLEGGFWVHQDCVNENIHRDWIVERREPWLKLPRTTFETVFANDIT 66 Query: 37 PYSVKTYQANFP--------NTLIFGDIAKIKTQ------DIP-DHDVLLAGFPCQPFSQ 81 + + A P N G I + Q P + DV+ GFPCQ FS Sbjct: 67 KAA---HNAWIPYFEKRGKKNVFHLGSIVDLVKQAEKGEFQFPSNIDVVTGGFPCQDFSV 123 Query: 82 AG 83 +G Sbjct: 124 SG 125 >gi|149210133|ref|XP_001522441.1| hypothetical protein MGCH7_ch7g548 [Magnaporthe oryzae 70-15] gi|86196503|gb|EAQ71141.1| hypothetical protein MGCH7_ch7g548 [Magnaporthe oryzae 70-15] Length = 877 Score = 74.0 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAK-IKT 61 D+FCG GG ++ E ++ TY+ NFP +F GDI ++ Sbjct: 455 FGDMFCGAGGASQGARAAGFRLG----YAVEHWNHAAATYRHNFPEVNLFEGDIFDFLQR 510 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 D+ D+L PCQ +S A Sbjct: 511 NDLDFVDILHLSPPCQYWSPA 531 >gi|114629604|ref|XP_001151712.1| PREDICTED: DNA methyltransferase 2 isoform 2 [Pan troglodytes] gi|119606625|gb|EAW86219.1| hCG23994, isoform CRA_c [Homo sapiens] gi|167887562|gb|ACA05986.1| tRNA aspartic acid methyltransferase 1 variant 1 [Homo sapiens] Length = 345 Score = 74.0 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQ 81 ++ D++L PCQPF++ Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTR 84 >gi|114629602|ref|XP_001151777.1| PREDICTED: DNA methyltransferase 2 isoform 3 [Pan troglodytes] gi|119606624|gb|EAW86218.1| hCG23994, isoform CRA_b [Homo sapiens] gi|167887560|gb|ACA05984.1| tRNA aspartic acid methyltransferase 1 variant 2 [Homo sapiens] Length = 367 Score = 74.0 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQ 81 ++ D++L PCQPF++ Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTR 84 >gi|169825443|ref|YP_001695618.1| modification methylase PspPI [Lysinibacillus sphaericus C3-41] gi|168994720|gb|ACA42259.1| Modification methylase PspPI [Lysinibacillus sphaericus C3-41] Length = 475 Score = 74.0 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ F G G L++ + F+ E + + TY+AN + + DI Sbjct: 145 IKVASFFAGSGIGDQGLKEA----GFDIVFALENDINAADTYRANHGDHITVQDIEDFDG 200 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 + + PC ++ A Sbjct: 201 STLNGIEFAFGSPPCVDYTPA 221 >gi|241832196|ref|XP_002414890.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis] gi|215509102|gb|EEC18555.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis] Length = 361 Score = 74.0 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L++ +L+ GIGG+ + ++N + TY NFP T L+ ++ + Sbjct: 19 LRVLELYSGIGGMHF----ACPPDKTRVVAAVDVNTTANATYAFNFPETRLLQRNVQSLT 74 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 +++ DVL PCQPF++ G Sbjct: 75 ARELDALRPDVLTMSPPCQPFTRQG 99 >gi|229586279|ref|YP_002844780.1| Site-specific DNA methylase [Rickettsia africae ESF-5] gi|228021329|gb|ACP53037.1| Site-specific DNA methylase [Rickettsia africae ESF-5] Length = 65 Score = 74.0 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I+ + Y+ NF + +GDI +I IP HD+L AGFPCQ FS +G Sbjct: 5 IDKDVQEAYKRNFGDKP-YGDITEISETKIPKHDILCAGFPCQSFSISG 52 >gi|167897069|ref|ZP_02484471.1| modification methylase (cytosine-specific DNA methylase) [Burkholderia pseudomallei 7894] Length = 349 Score = 73.6 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 13/88 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLFCG GG+ + L++ E NP + +TY+ N I+ DI + Sbjct: 6 YTAIDLFCGAGGLTVGLKKA----GFRVLAGIENNPIAAETYKLNNRAAKIYQDDIRMLC 61 Query: 61 TQDI--------PDHDVLLAGFPCQPFS 80 + + D+L PCQ FS Sbjct: 62 PTTVMQELGLKRGELDLLAGCPPCQGFS 89 >gi|110799652|ref|YP_695464.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC 13124] gi|110674299|gb|ABG83286.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC 13124] Length = 446 Score = 73.6 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 38/119 (31%), Gaps = 40/119 (33%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------ 48 M DLF G GG+ + + + E++ +VKTY N Sbjct: 1 MYTYIDLFAGPGGLCTGFKNA----GFKPLIAVEMSDNTVKTYARNHEAEVYSLQELLEN 56 Query: 49 --------------NTLIFGDIAKIKTQDI----------PDHDVLLAGFPCQPFSQAG 83 LI GDI + I DV+ G PC+ FS AG Sbjct: 57 KGRLEEILNINTDNTCLIHGDIRLVDNDIIVEILQKKFKTNSVDVVAGGPPCESFSLAG 115 >gi|156541588|ref|XP_001600175.1| PREDICTED: similar to DNA (cytosine-5)-methyltransferase [Nasonia vitripennis] Length = 1392 Score = 73.6 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 20/95 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------------FP 48 L+ D+F G GG+ L+Q E ++ E + + Y+ N F Sbjct: 918 LRTLDVFAGCGGLSEGLKQAGVA---ESLWAIENDTAAAHAYRLNNPKASVFTTDCNSFL 974 Query: 49 NTLIFGDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 +I G+ + Q +P + D+L G PCQ FS Sbjct: 975 EKVINGE-TSLGGQSLPKKGEVDLLCGGPPCQGFS 1008 >gi|157952985|ref|YP_001497877.1| hypothetical protein NY2A_B681L [Paramecium bursaria Chlorella virus NY2A] gi|155123212|gb|ABT15080.1| hypothetical protein NY2A_B681L [Paramecium bursaria Chlorella virus NY2A] Length = 350 Score = 73.6 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 32/83 (38%), Gaps = 8/83 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK +LF GIGGI L VE E + + GDI K Sbjct: 3 LKALELFAGIGGITYGLR-----GYVEPIAFCEYEKDAAAFLSQR--GLPVHGDITKFDA 55 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 D++ AG+PC FS AG Sbjct: 56 SVYKTKIDIVTAGWPCTGFSTAG 78 >gi|302673748|ref|XP_003026560.1| hypothetical protein SCHCODRAFT_62152 [Schizophyllum commune H4-8] gi|300100243|gb|EFI91657.1| hypothetical protein SCHCODRAFT_62152 [Schizophyllum commune H4-8] Length = 345 Score = 73.6 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 24/101 (23%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-------- 54 + + + GIGG+ L LE++ V C F + + + + Y+ NFP T + Sbjct: 4 RALEFYSGIGGLHLALERSKIAGQVACAF--DWDQAAEQVYKHNFPATPVKRVRDMIPHA 61 Query: 55 ----------DIAKIKTQD----IPDHDVLLAGFPCQPFSQ 81 DI+ + PD D+ L CQP++ Sbjct: 62 HRYTDLSTQVDISTLTASSLRDLFPDIDIWLLSPACQPYTV 102 >gi|316970903|gb|EFV54759.1| putative PWWP domain protein [Trichinella spiralis] Length = 613 Score = 73.6 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GD---IA 57 +++ LF GI ++ L++ N+E ++S EI+ ++ + N N +++ GD I Sbjct: 326 IRVLSLFDGIATGKIALDELG--INIEIYYSCEIDQEALLVTKVNHENQIVYLGDVRGIT 383 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82 + K ++I D+L+ G PC S A Sbjct: 384 REKLEEISPIDLLIGGSPCNDVSIA 408 >gi|331000405|ref|ZP_08324080.1| DNA (cytosine-5-)-methyltransferase [Parasutterella excrementihominis YIT 11859] gi|329571737|gb|EGG53417.1| DNA (cytosine-5-)-methyltransferase [Parasutterella excrementihominis YIT 11859] Length = 392 Score = 73.6 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTF-NHRNVECFFSSEINPYSVKTYQAN-----FPNTL-IFG 54 L + ++F G GGI L L QT + + ++++ + + +TY+ N L I Sbjct: 31 LTVGEMFSGPGGIGLALNQTKRGKLSFKHLWATDYDSDTCETYRKNIFTGIHKEALSICK 90 Query: 55 DIAKIK-TQDIPDHDVLLAGFPCQPFSQAG 83 DI ++ +++P D L GFPC FS G Sbjct: 91 DIREVDIAKELPQADGFLYGFPCNDFSNVG 120 >gi|291165152|gb|ADD81179.1| gp74 [Rhodococcus phage ReqiPine5] Length = 377 Score = 73.6 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 13/89 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQT---FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA 57 M + +LF G GG L E + ++ T +A + + DIA Sbjct: 1 MYDVVELFAGPGGTSEGLRMAAPDLKSNGY------EWDEHACATARA-AGHERVQADIA 53 Query: 58 KIKTQDIPD---HDVLLAGFPCQPFSQAG 83 K+ + +P+ ++ PCQ FS AG Sbjct: 54 KVDPRRVPELSAVHGVIGTPPCQGFSPAG 82 >gi|168018932|ref|XP_001761999.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686716|gb|EDQ73103.1| predicted protein [Physcomitrella patens subsp. patens] Length = 970 Score = 73.6 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF G+GGI L + + +SSE+ +++ ++ P GDI K+ Sbjct: 356 VLSLFDGLGGIWQALTKLGIPFSG---YSSEVLAPAIQVVKSRHPRVKHVGDIRKLNLSA 412 Query: 64 IPD-HDVLLAGFPCQPFSQAG 83 +P+ D+++ GFPCQ S G Sbjct: 413 VPEKVDLVVGGFPCQDLSIMG 433 >gi|327274474|ref|XP_003222002.1| PREDICTED: LOW QUALITY PROTEIN: tRNA (cytosine-5-)-methyltransferase-like [Anolis carolinensis] Length = 391 Score = 73.6 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 L++ +L+ GIGG+ L+ + + E + ++N + + Y NF T ++ I I Sbjct: 4 LRVLELYSGIGGMHYALQAS--NILAEIVAAVDVNTVANEVYTHNFCTTPLWPKTIEGIS 61 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 ++ +L PCQPF++ G Sbjct: 62 LKEFNKX--ILMSPPCQPFTRIG 82 >gi|86559667|ref|YP_473487.1| cytosine methyltransferase [Clostridium perfringens] gi|86475939|dbj|BAE79114.1| cytosine methyltransferase [Clostridium perfringens] Length = 314 Score = 73.6 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANF--PNTLIFGDIA 57 +K+ LF GIG E+ ++N+E E + Y+ Y F D+ Sbjct: 1 MKVLGLFSGIG----AFERAIENKNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVN 56 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + D D++ GFPC S AG Sbjct: 57 WVDGTHFKDIDLITYGFPCTDISLAG 82 >gi|86559571|ref|YP_473392.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens CPE str. F4969] gi|168215006|ref|ZP_02640631.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens CPE str. F4969] gi|86475843|dbj|BAE79019.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens] gi|94958361|gb|ABF47322.1| Dcm [Clostridium perfringens] gi|170713579|gb|EDT25761.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens CPE str. F4969] Length = 339 Score = 73.6 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANF--PNTLIFGDIA 57 +K+ LF GIG E+ ++N+E E + Y+ Y F D+ Sbjct: 1 MKVLGLFSGIG----AFERAIENKNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVN 56 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + D D++ GFPC S AG Sbjct: 57 WVDGTHFKDIDLITYGFPCTDISLAG 82 >gi|221108933|ref|XP_002155714.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase 1, partial [Hydra magnipapillata] Length = 1138 Score = 73.6 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-D----- 55 L+ D+F G GG+ L+Q + ++ E P + + Y+ N P+ ++F D Sbjct: 643 LRTLDIFAGCGGLSEGLDQVGVVNSC---WAIEFEPSAAQAYRLNNPSAIVFNQDCNNVL 699 Query: 56 --IAKIKTQD-----IP---DHDVLLAGFPCQPFS 80 I + K +D +P + D+L G PCQ FS Sbjct: 700 KQIMEGKEKDDLGQRLPRRGEVDLLCGGPPCQGFS 734 >gi|195578681|ref|XP_002079192.1| GD23816 [Drosophila simulans] gi|194191201|gb|EDX04777.1| GD23816 [Drosophila simulans] Length = 345 Score = 73.6 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 ++ +LF GIGG+ + + E + ++N + Y N+ + L+ +I + Sbjct: 3 FRVLELFSGIGGMHYAFKYA--QLDGEIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLS 60 Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83 +++ ++LL PCQP ++ G Sbjct: 61 VKEVTKLQANMLLMSPPCQPHTRQG 85 >gi|167744430|ref|ZP_02417204.1| hypothetical protein Bpse14_40548 [Burkholderia pseudomallei 14] Length = 349 Score = 73.6 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 13/85 (15%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQD 63 DLFCG GG+ + L++ E NP + +TY+ N I+ DI + Sbjct: 9 IDLFCGAGGLTVGLKKA----GFRVLAGIENNPIAAETYKLNNRAAKIYQDDIRMLCPTT 64 Query: 64 I--------PDHDVLLAGFPCQPFS 80 + + D+L PCQ FS Sbjct: 65 VMQELGLKRGELDLLAGCPPCQGFS 89 >gi|258515652|ref|YP_003191874.1| DNA-cytosine methyltransferase [Desulfotomaculum acetoxidans DSM 771] gi|257779357|gb|ACV63251.1| DNA-cytosine methyltransferase [Desulfotomaculum acetoxidans DSM 771] Length = 464 Score = 73.3 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 23/99 (23%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIF-------- 53 DLF G GGI L L + FF+ E +P + +T + N N + + Sbjct: 37 YIDLFAGCGGISLGLMNA----GWQGFFAIEKSPMAFETLKYNLIDGNKVHYNWPKWLSK 92 Query: 54 --GDIAKIKTQDIP-------DHDVLLAGFPCQPFSQAG 83 DI K + + D++ G PCQ +S AG Sbjct: 93 EPHDICKFRVRFWRQLKTISGQIDLIAGGPPCQGYSFAG 131 >gi|17225496|gb|AAL37432.1|AF328909_1 putative cytosine-specific DNA methyltransferase [Helicobacter pylori] gi|17225522|gb|AAL37451.1|AF328916_1 cytosine-specific DNA methyltransferase [Helicobacter pylori] Length = 361 Score = 73.3 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 11/90 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDI--AK 58 KI DLFCG GG L + + + + ++ T++ N N + + GDI + Sbjct: 3 YKILDLFCGAGGFSAGL---GYLKEFDALIGLDCDKQALITFENNHKNAIGVCGDITQTE 59 Query: 59 IKTQDIP-----DHDVLLAGFPCQPFSQAG 83 IK + I + ++++ G PCQ FS G Sbjct: 60 IKEKVIELAKKLEINMIIGGPPCQGFSNKG 89 >gi|114570713|ref|YP_757393.1| DNA (cytosine-5-)-methyltransferase [Maricaulis maris MCS10] gi|114341175|gb|ABI66455.1| DNA (cytosine-5-)-methyltransferase [Maricaulis maris MCS10] Length = 375 Score = 73.3 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 + I DLFCG GG+ L ++ + +++ Y+ NF D+AK K Sbjct: 1 MNIVDLFCGCGGLSLGA----HYAGFNTALAVDVDNDLRSAYRRNFGVGNAEKLDLAKTK 56 Query: 61 TQDI-----PDHDV-LLAGFPCQPFSQAG 83 + P+ V ++ G PCQ FS G Sbjct: 57 AATLKRKSGPERPVGVIGGPPCQGFSVMG 85 >gi|238760580|ref|ZP_04621711.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236] gi|238701199|gb|EEP93785.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236] Length = 304 Score = 73.3 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 +K DLF GIGG V+ +++ +V+++ N P + D+ + Sbjct: 1 MKAIDLFSGIGGSSTGAAMA----GVQVVWAANHWQEAVRSHAENHPLAVHVCQDLHQAD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 +P HD+++A CQ S+A Sbjct: 57 WSQVPHHDLMMASPCCQGHSKA 78 >gi|213691014|ref|YP_002321600.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522475|gb|ACJ51222.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457065|dbj|BAJ67686.1| putative DNA methylase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 390 Score = 73.3 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 10/85 (11%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDIAKI 59 + F GIG RL LE+ +S++I+ + Y+ F N TLI GD+ ++ Sbjct: 19 LEFFAGIGLARLGLEEA----GFHVAWSNDIDHAKCQMYRNQFGNNEQEHTLIEGDMGEL 74 Query: 60 KTQDIP-DHDVLLAGFPCQPFSQAG 83 D+P + + PC S AG Sbjct: 75 HGSDLPHNISIAWGSSPCTDISLAG 99 >gi|291515626|emb|CBK64836.1| DNA-methyltransferase (dcm) [Alistipes shahii WAL 8301] Length = 360 Score = 73.3 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ DLFCGIGG+ + + +++ Y+ N I+ DI + Sbjct: 14 IEVIDLFCGIGGLSFGM----KSKGFNILAGYDLDATCRYAYETNNNAKFIYKDIKTVSP 69 Query: 62 QDIP------DHDVLLAGFPCQPFS 80 +I VL PCQPFS Sbjct: 70 DEIRTAYGKGSIRVLAGCAPCQPFS 94 >gi|261820947|ref|YP_003259053.1| DNA-cytosine methyltransferase [Pectobacterium wasabiae WPP163] gi|261604960|gb|ACX87446.1| DNA-cytosine methyltransferase [Pectobacterium wasabiae WPP163] Length = 487 Score = 73.3 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ + GI + + ++ + SEI+P+ +P+ GD+ +I Sbjct: 10 LQFGSVCSGI----EAVSLAWEPLGMKAAWFSEIDPFPCAVLAHRYPHVPNLGDMTRIAN 65 Query: 62 Q----DIPDHDVLLAGFPCQPFSQAG 83 Q ++ D+L+ G PCQ FS AG Sbjct: 66 QVRVGEVIAPDILVGGTPCQAFSIAG 91 >gi|323350984|ref|ZP_08086641.1| modification methylase HgiDII [Streptococcus sanguinis VMC66] gi|322122708|gb|EFX94417.1| modification methylase HgiDII [Streptococcus sanguinis VMC66] Length = 352 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 13/88 (14%) Query: 2 LKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +KI DLFCG+GG+ +++T + +I+ S Y+ N T I D+ +I Sbjct: 1 MKINAIDLFCGVGGLTYGIQKT----GINVIAGYDIDEKSKFAYEYNNDATFILKDVKEI 56 Query: 60 KTQDI-----PDHD--VLLAGFPCQPFS 80 ++I D D VL+ PCQPFS Sbjct: 57 DDREISNLYPKDTDIKVLIGCAPCQPFS 84 >gi|23306232|emb|CAD43079.1| DNA methyltransferase 1c [Paracentrotus lividus] Length = 1375 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56 LK D+F G GG+ Q E ++ E + + Y+ N P + +F D Sbjct: 1132 LKCLDVFAGCGGLSEGFHQAGI---CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELL 1188 Query: 57 --------AKIKTQDIP---DHDVLLAGFPCQPFS 80 Q +P D ++L G PCQ FS Sbjct: 1189 RLVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFS 1223 >gi|12230342|sp|Q27746|DNMT1_PARLI RecName: Full=DNA (cytosine-5)-methyltransferase PliMCI; AltName: Full=DNA methyltransferase PliMCI; Short=DNA MTase PliMCI; Short=M.PliMCI; AltName: Full=Dnmt1; AltName: Full=MCMT gi|1004286|emb|CAA90563.1| DNA (cytosine-5-)-methyltransferase [Paracentrotus lividus] Length = 1612 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56 LK D+F G GG+ Q E ++ E + + Y+ N P + +F D Sbjct: 1131 LKCLDVFAGCGGLSEGFHQAGI---CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELL 1187 Query: 57 --------AKIKTQDIP---DHDVLLAGFPCQPFS 80 Q +P D ++L G PCQ FS Sbjct: 1188 RLVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFS 1222 >gi|23306229|emb|CAD42182.3| DNA methyltransferase [Paracentrotus lividus] Length = 1613 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56 LK D+F G GG+ Q E ++ E + + Y+ N P + +F D Sbjct: 1132 LKCLDVFAGCGGLSEGFHQAGI---CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELL 1188 Query: 57 --------AKIKTQDIP---DHDVLLAGFPCQPFS 80 Q +P D ++L G PCQ FS Sbjct: 1189 RLVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFS 1223 >gi|23306234|emb|CAD43089.1| DNA methyltransferase 1e [Paracentrotus lividus] Length = 1335 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56 LK D+F G GG+ Q E ++ E + + Y+ N P + +F D Sbjct: 1132 LKCLDVFAGCGGLSEGFHQAGI---CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELL 1188 Query: 57 --------AKIKTQDIP---DHDVLLAGFPCQPFS 80 Q +P D ++L G PCQ FS Sbjct: 1189 RLVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFS 1223 >gi|23306233|emb|CAD43080.2| DNA methyltransferase 1d [Paracentrotus lividus] Length = 1429 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56 LK D+F G GG+ Q E ++ E + + Y+ N P + +F D Sbjct: 1132 LKCLDVFAGCGGLSEGFHQAGI---CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELL 1188 Query: 57 --------AKIKTQDIP---DHDVLLAGFPCQPFS 80 Q +P D ++L G PCQ FS Sbjct: 1189 RLVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFS 1223 >gi|23306230|emb|CAD43077.1| DNA methyltransferase 1a [Paracentrotus lividus] Length = 1461 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56 LK D+F G GG+ Q E ++ E + + Y+ N P + +F D Sbjct: 980 LKCLDVFAGCGGLSEGFHQAGI---CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELL 1036 Query: 57 --------AKIKTQDIP---DHDVLLAGFPCQPFS 80 Q +P D ++L G PCQ FS Sbjct: 1037 RLVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFS 1071 >gi|145218897|ref|YP_001129606.1| DNA-cytosine methyltransferase [Prosthecochloris vibrioformis DSM 265] gi|145205061|gb|ABP36104.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265] Length = 467 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 41/117 (35%), Gaps = 43/117 (36%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----------LIFG 54 DLF G GG+ L LE F +E+N ++ TY N +T L Sbjct: 26 DLFAGCGGLSLGLENA----GFTPIFVNELNEDALATYLMNRHHTLGGLKFSDNANLRCN 81 Query: 55 DIAKIKT----------QDIPDH------------------DVLLAGFPCQPFSQAG 83 D ++ ++IP+ D++ G PCQ FS G Sbjct: 82 DAHELDNNRLARLKSDLENIPEANISFNNPKTPKNGGGGTLDIIAGGPPCQGFSGIG 138 >gi|262201418|ref|YP_003272626.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247] gi|262084765|gb|ACY20733.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247] Length = 342 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 11/85 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + D F G GG ++ + +P + T++ NF + I GDI + T+ Sbjct: 8 VVDFFSGCGGTSAGFRSA----GMQIAAGLDSDPDASATFKRNFKKSSFIEGDIRNVSTE 63 Query: 63 DIPD------HDVLLAGFPCQPFSQ 81 + D + PCQPFS+ Sbjct: 64 QVSDVVPSGAVTLFAGCAPCQPFSR 88 >gi|110765384|ref|XP_001122269.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Apis mellifera] Length = 1427 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 LK D+F G GG+ L Q N ++ E + + Y+ N PNT +F Sbjct: 956 LKTLDVFAGCGGLSEGLRQAGIVDNQ---WAIEKDEPAACAYRLNNPNTTVFCEDCNVLL 1012 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 GD+ Q +P + ++L G PCQ FS Sbjct: 1013 RKVMNGDLCDNNGQRLPQKGEVELLCGGPPCQGFS 1047 >gi|18202008|sp|O31073|MTS1_STRAH RecName: Full=Modification methylase SacI; Short=M.SacI; AltName: Full=Cytosine-specific methyltransferase SacI gi|2605794|gb|AAC97118.1| SacI methylase [Streptomyces achromogenes] Length = 390 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 17/97 (17%) Query: 4 ITDLFCGIGGIRLDLE--------QTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFG 54 + LF G GG+ +E Q + + +++ ++ T ANFP+T + G Sbjct: 7 VISLFSGAGGLDCAIESCAEPPLVQDGSGSPLRVAVATDYEQTALDTLSANFPHTKTLCG 66 Query: 55 DIAKIKTQDI--------PDHDVLLAGFPCQPFSQAG 83 DI I T ++ D +++ G PC PFS++G Sbjct: 67 DIQTIPTAELLEAGGLKPGDPTLVIGGPPCTPFSKSG 103 >gi|186472257|ref|YP_001859599.1| DNA-cytosine methyltransferase [Burkholderia phymatum STM815] gi|184194589|gb|ACC72553.1| DNA-cytosine methyltransferase [Burkholderia phymatum STM815] Length = 356 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 13/90 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT 61 + F G GG L + + E N ++ ANFP+ + GDIA + Sbjct: 24 TVVSTFAGCGGSSLGYSMA----GFDERLAVEWNEKQAASFVANFPHVPLHLGDIADLSD 79 Query: 62 QD--------IPDHDVLLAGFPCQPFSQAG 83 D + DV PCQ FS AG Sbjct: 80 ADALRMARLEPGELDVFDGSPPCQGFSLAG 109 >gi|300905017|ref|ZP_07122835.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1] gi|301305818|ref|ZP_07211903.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1] gi|300403166|gb|EFJ86704.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1] gi|300838908|gb|EFK66668.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1] gi|315254408|gb|EFU34376.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1] Length = 354 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 13/88 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +K+ D F G GG Q ++ F + + + +++ANFP I DI I Sbjct: 12 IKVFDFFSGCGGTSQGFHQA----GMDIVFGLDFDVDAASSFRANFPQAAFINSDIRLID 67 Query: 61 TQDIPD------HDVLL--AGFPCQPFS 80 I +D +L PCQP+S Sbjct: 68 NNAINKLVKKHRNDYILFSGCAPCQPYS 95 >gi|156365066|ref|XP_001626663.1| predicted protein [Nematostella vectensis] gi|156213548|gb|EDO34563.1| predicted protein [Nematostella vectensis] Length = 1263 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56 L+ D+F G GG+ L Q E ++ E + + Y+ N P +F D Sbjct: 789 LRSLDVFAGCGGLSEGLHQAGVA---ESLWAIEKEEPAAQAYRLNNPGCTVFTDDCNTLL 845 Query: 57 --------AKIKTQDIP---DHDVLLAGFPCQPFS 80 Q IP + ++L G PCQ FS Sbjct: 846 KLAMEGEATNSTGQKIPQRGEVELLCGGPPCQGFS 880 >gi|112818953|gb|ABI23560.1| DNA methyltransferase 2 [Artemia franciscana] Length = 379 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 4/85 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 +++ +LF G+GG+ + N++ S EIN +VKTYQ NF + ++ +I + Sbjct: 4 IQVLELFAGLGGLHIA-VNNQKDANIQVVKSFEINVNAVKTYQENFGHDVVSNRNILSLS 62 Query: 61 TQDI--PDHDVLLAGFPCQPFSQAG 83 T+++ + + + PCQPF++ G Sbjct: 63 TEELFRQNVNAIFMSPPCQPFTRLG 87 >gi|315506801|ref|YP_004085688.1| DNA-cytosine methyltransferase [Micromonospora sp. L5] gi|315413420|gb|ADU11537.1| DNA-cytosine methyltransferase [Micromonospora sp. L5] Length = 412 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 12/88 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++ ++ G GG L LE+ E + E++ + KT + N P+ + GD+A Sbjct: 4 FEVIEICAGAGGQALGLEKA----GFEHALAVELDSNACKTLEENRPSWKIAQGDVA--D 57 Query: 61 TQDIPDHD-----VLLAGFPCQPFSQAG 83 + D +L G PC PFS AG Sbjct: 58 EEVWRPADHQGVSLLAGGVPCPPFSIAG 85 >gi|296206224|ref|XP_002750114.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase isoform 3 [Callithrix jacchus] Length = 345 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYRFNFPHTQLLAKTIEGIT 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQ 81 Q+ D++L PCQPF++ Sbjct: 62 LQEFDRLSFDMILMSPPCQPFTR 84 >gi|296206222|ref|XP_002750113.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase isoform 2 [Callithrix jacchus] Length = 367 Score = 72.9 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYRFNFPHTQLLAKTIEGIT 61 Query: 61 TQDIP--DHDVLLAGFPCQPFSQ 81 Q+ D++L PCQPF++ Sbjct: 62 LQEFDRLSFDMILMSPPCQPFTR 84 >gi|309379397|emb|CBX21964.1| putative DNA cytosine methyltransferase [Neisseria lactamica Y92-1009] Length = 195 Score = 72.9 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIA 57 +++ +F GIG +EQ F + N F+ +I+ + K+Y N+ DI Sbjct: 38 IRLATVFSGIG----AVEQAFYRLNLNHTIVFAGDIDSHVKKSYLGNYKLNEDFWHNDIT 93 Query: 58 KIKTQDIPD-HDVLLAGFPCQPFSQAG 83 + + + D+L+ G PCQ FS G Sbjct: 94 QFDARKFRNQVDILVGGSPCQAFSMVG 120 >gi|71361889|gb|AAZ30053.1| C5-cytosine methyltransferase [Halorubrum saccharovorum] Length = 408 Score = 72.9 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 38/112 (33%), Gaps = 38/112 (33%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---------------- 46 K+ DLFCG GG L Q E + + ++ TYQ N Sbjct: 5 KVVDLFCGAGGASLGFVQA----GYEVVGAVDAYERALNTYQKNLCQRSLDEYSGSVSFD 60 Query: 47 ----------FPN--------TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80 + + T+ F DI + + D DV+ PCQ FS Sbjct: 61 APLQADLSRGYEDNDVDNELPTVTFEDIREEFDLEKGDIDVICGCPPCQNFS 112 >gi|222618843|gb|EEE54975.1| hypothetical protein OsJ_02581 [Oryza sativa Japonica Group] Length = 353 Score = 72.9 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ + + GIGG+R L + E + +IN + Y+ NF + G+I + Sbjct: 8 KVLEFYSGIGGMRYSLAASGARA--EVVEAFDINDVANDVYELNFGHRPYQGNIQTLTAS 65 Query: 63 DIP--DHDVLLAGFPCQPFSQAG 83 D+ L PCQP+++ G Sbjct: 66 DLDKYKAQAWLLSPPCQPYTRQG 88 >gi|218188646|gb|EEC71073.1| hypothetical protein OsI_02832 [Oryza sativa Indica Group] Length = 353 Score = 72.9 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ + + GIGG+R L + E + +IN + Y+ NF + G+I + Sbjct: 8 KVLEFYSGIGGMRYSLAASGARA--EVVEAFDINDVANDVYELNFGHRPYQGNIQTLTAS 65 Query: 63 DIP--DHDVLLAGFPCQPFSQAG 83 D+ L PCQP+++ G Sbjct: 66 DLDKYKAQAWLLSPPCQPYTRQG 88 >gi|209883303|ref|YP_002287160.1| C-5 cytosine-specific DNA methylase [Oligotropha carboxidovorans OM5] gi|209871499|gb|ACI91295.1| C-5 cytosine-specific DNA methylase [Oligotropha carboxidovorans OM5] Length = 562 Score = 72.9 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 9/84 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--FPNTLIFGDIAKI 59 + DL+ G+GG L L ++ S E++ ++ KT N P + + DI KI Sbjct: 8 ITAIDLYSGVGGWSLGLRLA----GIDVIASYELSEFANKTNDLNNSHPTSTV--DIRKI 61 Query: 60 KTQDIPD-HDVLLAGFPCQPFSQA 82 + +P DV++ PC FS A Sbjct: 62 DLKSLPKNVDVVVGSPPCTQFSYA 85 >gi|145629891|ref|ZP_01785682.1| modification methylase Bsp6I-like protein [Haemophilus influenzae 22.1-21] gi|144977718|gb|EDJ87668.1| modification methylase Bsp6I-like protein [Haemophilus influenzae 22.1-21] Length = 411 Score = 72.5 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----DIPDHDVLLAGFPCQPFSQA 82 + + SEI P+ ++PN GD+ + + +IP DVL+ G PCQ FS A Sbjct: 9 GKPLWFSEIEPFPCAVLTYHYPNIPNLGDMTTLPEKILNREIPAPDVLVGGTPCQAFSIA 68 Query: 83 G 83 G Sbjct: 69 G 69 >gi|196037189|ref|ZP_03104504.1| modification methylase HaeIII [Bacillus cereus W] gi|195990293|gb|EDX54346.1| modification methylase HaeIII [Bacillus cereus W] Length = 415 Score = 72.5 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 28/108 (25%) Query: 2 LKITDLFCGIGGIRLDLE--------------QTFNHRN----------VECFFSSEINP 37 + I LF G GG+ L +E + F ++ +S+++ Sbjct: 63 MNIVSLFSGAGGLDLGVELSSMVVQFGEEKAYRAFENKEDYLKLRSIVKSNFVYSNDMFT 122 Query: 38 YSVKTYQANFPNTL--IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + TY NF T+ + DI K+ + P+ +++L GFPC FS +G Sbjct: 123 SANLTYVNNFAPTVTKVAKDIRKV--AEFPNCNLMLGGFPCPGFSSSG 168 >gi|295687890|ref|YP_003591583.1| DNA-cytosine methyltransferase [Caulobacter segnis ATCC 21756] gi|295429793|gb|ADG08965.1| DNA-cytosine methyltransferase [Caulobacter segnis ATCC 21756] Length = 379 Score = 72.5 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K+ +LFCG GG E + +++ +Y+ NFP T L D+ ++ Sbjct: 1 MKLVELFCGTGGFSRGAHAA----GFEVAVAYDLDKTLTSSYEINFPQTKLRHEDVGELT 56 Query: 61 TQDIP-----DHDVLLAGFPCQPFSQAG 83 I + L G PCQ FS G Sbjct: 57 GDKIRAEVGDEVFGLFGGPPCQGFSDIG 84 >gi|332530473|ref|ZP_08406414.1| DNA cytosine methyltransferase M.NgoMIII [Hylemonella gracilis ATCC 19624] gi|332040042|gb|EGI76427.1| DNA cytosine methyltransferase M.NgoMIII [Hylemonella gracilis ATCC 19624] Length = 413 Score = 72.5 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 21/97 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----------FPNTL 51 L +LF G GG+ + + E + ++ T + N +P + Sbjct: 3 LTSIELFAGAGGLAMGVALA----GFRSHAVVEWDKWACDTVRQNQERGHPLVRDWP--V 56 Query: 52 IFGDIA----KIKTQDIP-DHDVLLAGFPCQPFSQAG 83 + GD+ + D+L G PCQPFS G Sbjct: 57 VEGDVRNWARDFDASGLEGKLDLLAGGPPCQPFSMGG 93 >gi|117620606|ref|YP_855619.1| modification methylase DdeI [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562013|gb|ABK38961.1| modification methylase DdeI [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 440 Score = 72.5 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 39/104 (37%), Gaps = 31/104 (29%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----------FPN--- 49 DLF G GG+ L L Q + F+ E + +T Q N +PN Sbjct: 12 TFIDLFSGCGGLSLGLMQA----GWKGLFAIEKTSGAFETLQHNLLGGGRYTYDWPNWLP 67 Query: 50 ----------TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 G+++ + D+++ G PCQ FS AG Sbjct: 68 KSNMTVDTLLENHKGNLSLLAG----KVDLIVGGPPCQGFSLAG 107 >gi|331086924|ref|ZP_08336001.1| hypothetical protein HMPREF0987_02304 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410090|gb|EGG89525.1| hypothetical protein HMPREF0987_02304 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 438 Score = 72.5 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 38/103 (36%), Gaps = 28/103 (27%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--------PNTLIFG-D 55 DLFCG GG L Q FSS+I+ TY NT D Sbjct: 5 VDLFCGAGGCSEGLIQA----GFHILFSSDISDMVELTYTHRHEQLGLIQGKNTWFERSD 60 Query: 56 IAKIKTQDI---------------PDHDVLLAGFPCQPFSQAG 83 I + DI P+ D+++ G CQ FS+AG Sbjct: 61 IRDLTGNDIRKYITNLEIFKGKEMPEIDLMIGGPSCQGFSRAG 103 >gi|299820316|gb|ADJ54326.1| C5-cytosine specific methylase [archaeon enrichment culture clone 1(2010)] Length = 396 Score = 72.5 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 8/84 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---FPNTLIFGDIAK 58 LK+ DL+ G+GG+ L + + E EIN +V TY N + D+ + Sbjct: 4 LKVLDLYSGLGGLSLGVAIALRPK--EIIGL-EINKNAVDTYNLNLSRYNAKAFRQDVLQ 60 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQA 82 + + +D+++ G PC+PFS A Sbjct: 61 WQPE--GHYDLIIGGSPCEPFSIA 82 >gi|330465519|ref|YP_004403262.1| DNA-cytosine methyltransferase [Verrucosispora maris AB-18-032] gi|328808490|gb|AEB42662.1| DNA-cytosine methyltransferase [Verrucosispora maris AB-18-032] Length = 392 Score = 72.5 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 10/85 (11%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDIAKI 59 + F GIG +RL LE + +S++I P + Y +F + T GDIA + Sbjct: 19 AEFFAGIGLVRLGLEDA----GFKVIWSNDIEPDKKEMYVRHFNDPEGTHTYKRGDIADV 74 Query: 60 K-TQDIPDHDVLLAGFPCQPFSQAG 83 + Q + + + A FPC S AG Sbjct: 75 RGPQMVDELSLAWASFPCTDLSLAG 99 >gi|301382137|ref|ZP_07230555.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato Max13] Length = 320 Score = 72.5 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L+ + GI ++ +E + +EI+P+ ++P T GD+ K Sbjct: 10 LQYGSVCSGI----EAATAAWHPLGMEPVWFAEIDPFPSAVLAHHYPRTPNLGDMTKLGA 65 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 + I DVL+ G PCQ FS AG Sbjct: 66 LVLAGKIDAPDVLVGGTPCQAFSVAG 91 >gi|260431846|ref|ZP_05785817.1| C-5 cytosine-specific DNA methylase [Silicibacter lacuscaerulensis ITI-1157] gi|260415674|gb|EEX08933.1| C-5 cytosine-specific DNA methylase [Silicibacter lacuscaerulensis ITI-1157] Length = 381 Score = 72.5 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Query: 27 VECFFSSEINPYSVKTYQANFPN--TLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 C F+++I+ +Y+AN L+ D+AK+ +IP D++ A FPCQ S AG Sbjct: 23 WTCLFANDIDAKKAASYRANHDGGRELLLKDVAKVTVDEIPGSADLVWASFPCQDLSLAG 82 >gi|322377723|ref|ZP_08052213.1| modification methylase HgiDII [Streptococcus sp. M334] gi|321281488|gb|EFX58498.1| modification methylase HgiDII [Streptococcus sp. M334] Length = 351 Score = 72.5 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 13/88 (14%) Query: 2 LKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +KI DLFCG+GG+ ++Q + +I+ S Y+ N I DI I Sbjct: 1 MKINAVDLFCGVGGLTYGIQQA----GINVVAGYDIDEKSKFAYEYNNDAKFILKDINGI 56 Query: 60 KTQDI-----PDHD--VLLAGFPCQPFS 80 + +I D D VL+ PCQPFS Sbjct: 57 EDDEILGLYPSDTDIKVLIGCAPCQPFS 84 >gi|261495470|ref|ZP_05991917.1| modification methylase Bsp6I-like protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308804|gb|EEY10060.1| modification methylase Bsp6I-like protein [Mannheimia haemolytica serotype A2 str. OVINE] Length = 157 Score = 72.5 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 9/86 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IA--- 57 + GI ++ + SEI P+ FP+ GD IA Sbjct: 4 FTYGSICSGI----EAASVAWHDIG-TPLWFSEIEPFPCAVLAHRFPDVPNLGDMIALPE 58 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 KI ++IP DVL+ G PCQ FS AG Sbjct: 59 KILNREIPAPDVLVGGTPCQAFSMAG 84 >gi|256811042|ref|YP_003128411.1| DNA-cytosine methyltransferase [Methanocaldococcus fervens AG86] gi|256794242|gb|ACV24911.1| DNA-cytosine methyltransferase [Methanocaldococcus fervens AG86] Length = 362 Score = 72.5 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 41/140 (29%), Gaps = 62/140 (44%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--------- 51 MLK DLFCG GG + E + E+N + +Y NF + Sbjct: 1 MLKFIDLFCGCGGFSRGFVE----EGFEPLVAVELNEDAAFSYALNFNGKIYEKIKPGEF 56 Query: 52 -------------------------------------------IFGDIAKIKTQDIPDH- 67 I DI +I + +I Sbjct: 57 RLKELKGYVGIYPFKFPFEDEDIKWLKKLGTLNEKTEKLSPVVINDDIREIHSIEIEKFC 116 Query: 68 -----DVLLAGFPCQPFSQA 82 DV++ G PC+ ++ A Sbjct: 117 KNKKVDVIIGGPPCEGYTGA 136 >gi|270015149|gb|EFA11597.1| DNA methyltransferase 1 [Tribolium castaneum] Length = 1882 Score = 72.5 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 13/89 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D+F G GG+ ++ E + ++ T++ N +F D + Sbjct: 753 LKCLDVFAGCGGLSQGFHAAGVAN---TKWAIENDKPALDTFRHNNRTCHVFRDDCNVLL 809 Query: 62 QDI----------PDHDVLLAGFPCQPFS 80 +++ + ++++ G PCQ FS Sbjct: 810 RNVMSGKGGLPPKSEVEMIVGGPPCQGFS 838 >gi|157953809|ref|YP_001498700.1| hypothetical protein AR158_C619L [Paramecium bursaria Chlorella virus AR158] gi|156068457|gb|ABU44164.1| hypothetical protein AR158_C619L [Paramecium bursaria Chlorella virus AR158] Length = 363 Score = 72.5 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 8/83 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K +LF GIGGI L VE E + + GDI K Sbjct: 16 MKALELFAGIGGITHGLR-----GYVEPIAFCEYEKDASSFLSQR--GLPVHGDITKFDA 68 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 D++ AG+PC FS AG Sbjct: 69 SVYKNKIDIVTAGWPCTGFSTAG 91 >gi|227525081|ref|ZP_03955130.1| possible DNA (cytosine-5-)-methyltransferase [Lactobacillus hilgardii ATCC 8290] gi|227087758|gb|EEI23070.1| possible DNA (cytosine-5-)-methyltransferase [Lactobacillus hilgardii ATCC 8290] Length = 143 Score = 72.5 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 8/84 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + DLF G GG+ LEQ+ + ++ E++ Y N PN +I DI K+ Sbjct: 3 INAIDLFSGCGGLTEGLEQS----EINVEYAIELDRKISNIYATNHPNVKIINSDIQKVT 58 Query: 61 TQDI---PDHDVLLAGFPCQPFSQ 81 + +++ PCQ F+Q Sbjct: 59 DTTFKQMENVNLVAGCPPCQGFTQ 82 >gi|330802352|ref|XP_003289182.1| hypothetical protein DICPUDRAFT_153508 [Dictyostelium purpureum] gi|325080758|gb|EGC34300.1| hypothetical protein DICPUDRAFT_153508 [Dictyostelium purpureum] Length = 378 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ + + GIGG+ L+++ E S +IN ++ Y+ F +I + Sbjct: 18 LRVLEFYSGIGGMHYGLKESGVK--FEVVQSFDINTNAILNYKYTFNENTSQKNIESLTV 75 Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83 ++I + + L PCQPF+++G Sbjct: 76 EEIDNFKSNAWLMSPPCQPFTRSG 99 >gi|311248707|ref|XP_003123295.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Sus scrofa] Length = 1587 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P + +F Sbjct: 1111 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNVL 1166 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ + Q +P D ++L G PCQ FS Sbjct: 1167 LKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 1202 >gi|222840488|gb|ACM68681.1| DNA methyltransferase 1 [Capra hircus] Length = 1420 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P + +F Sbjct: 1063 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNVL 1118 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ + Q +P D ++L G PCQ FS Sbjct: 1119 LKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 1154 >gi|194213189|ref|XP_001916472.1| PREDICTED: similar to DNA (cytosine-5)-methyltransferase 1 (Dnmt1) (DNA methyltransferase HsaI) (DNA MTase HsaI) (MCMT) (M.HsaI) (CXXC-type zinc finger protein 9) [Equus caballus] Length = 1615 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P + +F Sbjct: 1138 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNVL 1193 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ + Q +P D ++L G PCQ FS Sbjct: 1194 LKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 1229 >gi|168805279|gb|ACA28713.1| DNA methyltransferase b [Bos taurus] Length = 1348 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P + +F Sbjct: 855 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNVL 910 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ + Q +P D ++L G PCQ FS Sbjct: 911 LKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 946 >gi|317108162|ref|NP_872592.2| DNA (cytosine-5)-methyltransferase 1 [Bos taurus] gi|108935977|sp|Q24K09|DNMT1_BOVIN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1 gi|89994055|gb|AAI14064.1| DNA (cytosine-5-)-methyltransferase 1 [Bos taurus] gi|296485884|gb|DAA27999.1| DNA (cytosine-5)-methyltransferase 1 [Bos taurus] Length = 1611 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P + +F Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNVL 1191 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ + Q +P D ++L G PCQ FS Sbjct: 1192 LKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 1227 >gi|37728049|gb|AAO44952.1| cytosine-5-methyltransferase [Bos taurus] Length = 1611 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P + +F Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNVL 1191 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ + Q +P D ++L G PCQ FS Sbjct: 1192 LKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 1227 >gi|57164173|ref|NP_001009473.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries] gi|29536011|gb|AAO39704.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries] Length = 1611 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P + +F Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGSTVFTEYCNVL 1191 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ + Q +P D ++L G PCQ FS Sbjct: 1192 LKLVMGGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 1227 >gi|78221478|ref|YP_383225.1| C-5 cytosine-specific DNA methylase [Geobacter metallireducens GS-15] gi|78192733|gb|ABB30500.1| C-5 cytosine-specific DNA methylase [Geobacter metallireducens GS-15] Length = 331 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L+ +LFCGIGG +E NV + + +P ++ TY+ NFP D+ ++ Sbjct: 27 LRTLELFCGIGGFSAAVEGG----NVRIVGAFDQDPAALDTYRLNFPGHGARKVDLERVS 82 Query: 61 TQDI--PDHDVLLAGFPCQPFSQAG 83 ++ D+ PCQP+ + G Sbjct: 83 AWELTAGGVDLWWLSPPCQPYCERG 107 >gi|226330016|ref|ZP_03805534.1| hypothetical protein PROPEN_03929 [Proteus penneri ATCC 35198] gi|225200811|gb|EEG83165.1| hypothetical protein PROPEN_03929 [Proteus penneri ATCC 35198] Length = 325 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Query: 33 SEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 +EI+ ++ T + N P +I GD+A I + DVL GFPCQ FS AG Sbjct: 3 NEIDKHACNTLRLNRPKWNVIEGDVAGIDFSEYKGKVDVLAGGFPCQAFSYAG 55 >gi|323454079|gb|EGB09949.1| hypothetical protein AURANDRAFT_62427 [Aureococcus anophagefferens] Length = 634 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKT 61 +LF GIGG R LE + EI + + Y ANF +L + ++ Sbjct: 186 TFAELFAGIGGFRAGLEAAAGAPPAP-AVACEILESARRIYAANFGAESLTAAPVQRLDR 244 Query: 62 QDIPDHDVLLAGFPCQPFS-QAG 83 +P D+L+AGFPCQ ++ QAG Sbjct: 245 --LPACDLLMAGFPCQSYTEQAG 265 >gi|115386470|ref|XP_001209776.1| predicted protein [Aspergillus terreus NIH2624] gi|114190774|gb|EAU32474.1| predicted protein [Aspergillus terreus NIH2624] Length = 597 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 + D FCG GG+ + H ++ +++ ++++TY NFP T + D+ Sbjct: 292 YTLGDAFCGAGGVSCGARKAGLHNE----WAVDVSQHALETYGLNFPTTDCWQADVNSFL 347 Query: 61 T--QDIPDHDVLLAGFPCQPFSQA 82 + D DVL PCQPFS A Sbjct: 348 SLNHDYLKVDVLHGSPPCQPFSPA 371 >gi|210621902|ref|ZP_03292899.1| hypothetical protein CLOHIR_00844 [Clostridium hiranonis DSM 13275] gi|210154533|gb|EEA85539.1| hypothetical protein CLOHIR_00844 [Clostridium hiranonis DSM 13275] Length = 438 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 39/103 (37%), Gaps = 28/103 (27%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--------PNTLIFG-D 55 DLFCG GG L Q FSS+I+ TY+ NT D Sbjct: 5 VDLFCGAGGCSEGLIQA----GFHILFSSDISEMVEVTYKNRHEQLGLIQGKNTWFERSD 60 Query: 56 IAKIKTQDI---------------PDHDVLLAGFPCQPFSQAG 83 I + + I P+ D+L+ G CQ FS+AG Sbjct: 61 IRDLTGETIFKCIESLDIFKNQKIPEIDLLIGGPSCQGFSRAG 103 >gi|301766512|ref|XP_002918675.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Ailuropoda melanoleuca] Length = 391 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ +L+ GIGG+ L ++ + ++N + + Y+ NFP+T + I+ Sbjct: 4 LRALELYSGIGGMHQALRESCVPA--HVVAAIDVNTVANEVYKYNFPHTQLLA--KTIEG 59 Query: 62 QDIPDHD-----VLLAGFPCQPFSQAG 83 + + D +L PCQPF++ G Sbjct: 60 ITLEEFDKLSFNTILMSPPCQPFTRIG 86 >gi|311897184|dbj|BAJ29592.1| putative modification methylase [Kitasatospora setae KM-6054] Length = 433 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 23/98 (23%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPN----------- 49 +LF G GG+ + + + +E + +T +AN P+ Sbjct: 15 VELFAGAGGLAMSVHRA----GFRPLLFNEFAKRACETLEANGAEWLPDGQKPTRAPESG 70 Query: 50 ---TLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 L+ GD+ + + DVL G PCQPFS G Sbjct: 71 KKVPLVAGDVQDLDMNYLKGQVDVLAGGPPCQPFSLGG 108 >gi|283549176|ref|NP_001164521.1| DNA methyltransferase 1a [Nasonia vitripennis] Length = 1349 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 18/94 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GD----I 56 L+ D+F G GG+ L Q E ++ E++ + Y+ N PN +F GD + Sbjct: 880 LRTLDVFAGCGGLSEGLHQAGVA---ESSWAIEVDEAAAHAYRLNNPNAAVFTGDCNAYL 936 Query: 57 AKIKTQD-------IP---DHDVLLAGFPCQPFS 80 K+ + +P + D+L G PCQ FS Sbjct: 937 KKVMDGETMAGGQRLPQRGEVDLLCGGPPCQGFS 970 >gi|332359910|gb|EGJ37724.1| C-5 cytosine-specific DNA methylase superfamily protein [Streptococcus sanguinis SK1056] Length = 516 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 36/103 (34%), Gaps = 28/103 (27%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLIFGD 55 DLFCG GG + Q + FSS+ +P +TY D Sbjct: 5 IDLFCGAGGFSEGILQA----GFDIIFSSDKSPMVEETYTNRHKQLGLVEGVDTHFELAD 60 Query: 56 IAKIKTQDI---------------PDHDVLLAGFPCQPFSQAG 83 I ++ + I DV+ G PCQ FS+ G Sbjct: 61 IKELTSDKIFQSINSLKYGNIFERGTIDVIFGGPPCQGFSRLG 103 >gi|227540760|ref|ZP_03970809.1| DNA-cytosine methyltransferase [Corynebacterium glucuronolyticum ATCC 51866] gi|227183472|gb|EEI64444.1| DNA-cytosine methyltransferase [Corynebacterium glucuronolyticum ATCC 51866] Length = 387 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--------TLIF 53 ++ +LF L + V + E + ++ T + N N +I Sbjct: 3 IRAIELFA----GGGGLLLGTSSVGVNHLAAVEWDKWACDTLRENANNGHRLVAGLPVIE 58 Query: 54 GDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 D+ + P D D++ G PCQPFS G Sbjct: 59 DDVRNLHWDSFPTDVDLVTGGPPCQPFSLGG 89 >gi|83942245|ref|ZP_00954706.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. EE-36] gi|83846338|gb|EAP84214.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. EE-36] Length = 384 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 7/82 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 + FCG G +R L+ +C +++I+ K Y N+ + GDIA + Sbjct: 11 YAEFFCGGGMVRAALQ-----DRWDCVLANDIDAMKCKVYAQNWGQAALHQGDIATMPDD 65 Query: 63 DI-PDHDVLLAGFPCQPFSQAG 83 + D+ A PCQ FS AG Sbjct: 66 LLTRQIDMYWASSPCQDFSLAG 87 >gi|56182698|gb|AAV84097.1| CviPII m5C DNA methyltransferase [Chlorella virus] Length = 363 Score = 72.1 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 8/83 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K +LF GIGGI L VE E + + GDI K Sbjct: 16 MKALELFAGIGGITHGLR-----GYVEPIAFCEYEKDASSFLSQR--GLPVHGDITKFDA 68 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 D++ AG+PC FS AG Sbjct: 69 SVYKNKIDIVTAGWPCTGFSTAG 91 >gi|313668701|ref|YP_004048985.1| modification methylase [Neisseria lactamica ST-640] gi|313006163|emb|CBN87625.1| putative modification methylase [Neisseria lactamica 020-06] Length = 372 Score = 72.1 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 9/81 (11%) Query: 8 FCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKIKTQD 63 F GIG +EQ F + N F+ +I+ + K+Y N+ DI + + Sbjct: 5 FSGIG----AVEQAFYRLNLNHTIVFAGDIDSHVKKSYLGNYKLNEDFWHNDITQFDARK 60 Query: 64 IPD-HDVLLAGFPCQPFSQAG 83 + D+L+ G PCQ FS G Sbjct: 61 FRNQVDILVGGSPCQAFSMVG 81 >gi|116007318|ref|NP_001036355.1| methyltransferase 2, isoform C [Drosophila melanogaster] gi|113194978|gb|ABI31309.1| methyltransferase 2, isoform C [Drosophila melanogaster] Length = 345 Score = 72.1 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 40/85 (47%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 ++ +LF GIGG+ + + + ++N + Y N+ + L+ +I + Sbjct: 3 FRVLELFSGIGGMHYAFNYA--QLDGQIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLS 60 Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83 +++ ++LL PCQP ++ G Sbjct: 61 VKEVTKLQANMLLMSPPCQPHTRQG 85 >gi|255514225|gb|EET90487.1| DNA-cytosine methyltransferase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 328 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 11/88 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61 + D+FCG GG ++ + +V T+ N ++ + D+ + Sbjct: 6 TVIDIFCGAGGFSQGFKEA----GYSILAGVDNWKPAVDTFSRNHKKSIGLEADMRSLTV 61 Query: 62 QDIP------DHDVLLAGFPCQPFSQAG 83 + +V++ G PCQ FS G Sbjct: 62 GQLKTLVSEAKVNVVIGGPPCQGFSMGG 89 >gi|168185144|ref|ZP_02619808.1| modification methylase SinI [Clostridium botulinum Bf] gi|182671812|gb|EDT83773.1| modification methylase SinI [Clostridium botulinum Bf] Length = 363 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 14/93 (15%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M F G GG+ + + EI +T + N+P+ + GDI + Sbjct: 1 MKNAISFFTGAGGLDIGVHDA----GFNVRLCVEIEKRYCETIKLNYPDWNIKNGDIMEY 56 Query: 60 KTQDI---------PDHDVLLAGFPCQPFSQAG 83 + I + ++ G PCQ FS AG Sbjct: 57 DKERIYKEGLLNSNEEISLIFGGSPCQSFSTAG 89 >gi|210062530|gb|ACJ06270.1| DNA-cytosine methyltransferase [Photorhabdus luminescens] Length = 369 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ + GI + + + SEI + Q ++ GD+ +I T Sbjct: 1 MRFGSVCSGI----EAASVAWEPLGMSPAWFSEIEKFPSAVLQYHWSYVRNLGDMTEIPT 56 Query: 62 ---QDIPDH-DVLLAGFPCQPFSQAG 83 +++ D D+L+ G PCQ FS AG Sbjct: 57 MITENLADAPDILVGGTPCQAFSIAG 82 >gi|149204151|ref|ZP_01881119.1| C-5 cytosine-specific DNA methylase [Roseovarius sp. TM1035] gi|149142593|gb|EDM30638.1| C-5 cytosine-specific DNA methylase [Roseovarius sp. TM1035] Length = 366 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDIP-DHDVLLAGFP 75 + + N C +++I+ + Y+ N+ T +F GD+A + + + D D+ A P Sbjct: 1 MVRAALQENWHCVLANDIDEMKCRVYRENWSGTGLFEGDVASLDPEFLKQDIDLYWASSP 60 Query: 76 CQPFSQAG 83 CQ FS AG Sbjct: 61 CQDFSLAG 68 >gi|257466255|ref|ZP_05630566.1| DNA-cytosine methyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|315917413|ref|ZP_07913653.1| DNA-cytosine methyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|313691288|gb|EFS28123.1| DNA-cytosine methyltransferase [Fusobacterium gonidiaformans ATCC 25563] Length = 407 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 37/112 (33%), Gaps = 33/112 (29%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---------LI 52 K DLF G GG+ QT + EC S E V T + N ++ Sbjct: 4 YKFIDLFAGCGGLEDGFMQTGD---YECISSVEWLKPQVDTLRHRLKNKYNILDADESVL 60 Query: 53 FGDIAKIKT---------------------QDIPDHDVLLAGFPCQPFSQAG 83 DI + + D+++ G PCQ +S AG Sbjct: 61 HFDIQREDELFNGWSNDENFGSSLGLDYYVKKSNGVDLIIGGPPCQAYSIAG 112 >gi|292657161|ref|YP_003537057.1| site-specific DNA-methyltransferase (cytosine-specific) [Haloferax volcanii DS2] gi|291373000|gb|ADE05226.1| site-specific DNA-methyltransferase (cytosine-specific) [Haloferax volcanii DS2] Length = 406 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 36/103 (34%), Gaps = 30/103 (29%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--------FPNTLIFGD 55 + DLFCG GG L Q + +IN +++TY+ N +P + F Sbjct: 6 VVDLFCGAGGASLGFVQA----GYTVAGAVDINDEALETYKRNLCDADLDEYPGEVTFDS 61 Query: 56 ------------------IAKIKTQDIPDHDVLLAGFPCQPFS 80 I + + DV+ PCQ FS Sbjct: 62 PLKGNLNANKGGHVTFEYIRNEFGLEPGEVDVIAGCPPCQNFS 104 >gi|312114242|ref|YP_004011838.1| DNA-cytosine methyltransferase [Rhodomicrobium vannielii ATCC 17100] gi|311219371|gb|ADP70739.1| DNA-cytosine methyltransferase [Rhodomicrobium vannielii ATCC 17100] Length = 363 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 10/84 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + DLFCG GG+ + + + + ++ N I D+A++K + Sbjct: 23 TVVDLFCGAGGLSHGF----HSEGFDIVAGIDTDETCRYAFEHNNDAPFIRRDVAQLKGR 78 Query: 63 DIPD------HDVLLAGFPCQPFS 80 +I D H VL+ PCQPFS Sbjct: 79 EIEDLFVPGRHRVLVGCAPCQPFS 102 >gi|307193684|gb|EFN76367.1| DNA (cytosine-5)-methyltransferase 1 [Harpegnathos saltator] Length = 1460 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L+ D+F G GG+ L + E ++ E + ++ N+PN +F Sbjct: 936 LRTLDIFAGCGGLSDGLHEAGVA---ETLWAIEKEETAAYAFRLNYPNATVFSTDCNTLL 992 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 GD Q P + ++L G PCQ FS Sbjct: 993 RKVMKGDRIDENGQKYPQKGEVELLCGGPPCQGFS 1027 >gi|317506240|ref|ZP_07964059.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] gi|316255486|gb|EFV14737.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] Length = 347 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 7/80 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 I DLF G+GG L H V EI+P + T +A + ++ D+ + D Sbjct: 2 ILDLFSGVGGWLEGLGPGVPHVGV------EIDPDAAATSRA-AGHNVVQADVTLLDPSD 54 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 + A PCQ FS AG Sbjct: 55 YSGIVGITASPPCQSFSVAG 74 >gi|331035537|gb|AEC53094.1| DNA-cytosine methyltransferase [Synechococcus phage S-CRM01] Length = 381 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 13/92 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 + + F G GG + +E + TY N+P T+I DI ++ Sbjct: 19 LFTVISTFAGGGGSSTGYRLA----GGKLLAINEFVEEARITYHQNYPETIILPDDIRQL 74 Query: 60 KTQDIPD--------HDVLLAGFPCQPFSQAG 83 +D D D+L PC FS AG Sbjct: 75 TGKDFLDKVGLKPGELDLLDGSPPCSAFSVAG 106 >gi|319443146|ref|ZP_07992302.1| DNA-cytosine methyltransferase [Corynebacterium variabile DSM 44702] Length = 417 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 11/85 (12%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 F G G+ L LE+T E + EI+ +T N P+ +I D+A++ + + Sbjct: 11 SFFSGAMGLDLGLEET----GWEPSLAVEIDARFCETISRNKPDLDIINSDVAELTGEAL 66 Query: 65 ------PDHDVLLAGFPCQPFSQAG 83 D+++ G PCQ FS G Sbjct: 67 FARTGENQVDLMVGGPPCQSFSTGG 91 >gi|313676237|ref|YP_004054233.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] gi|312942935|gb|ADR22125.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126] Length = 448 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 37/122 (30%), Gaps = 40/122 (32%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN---------------------------VECFFSSE 34 L + LF G GG+ L E F + FS++ Sbjct: 35 LNVVSLFSGCGGMDLGFEGGFKVKKESVNEILNKDFIESFCANGYIKLKKTRFRTTFSND 94 Query: 35 INPYSVKTYQANF------PNTLIFGDIAKI------KTQDIPD-HDVLLAGFPCQPFSQ 81 I + + F P I + P+ DV+ GFPCQ FS Sbjct: 95 ILTEARNAWVHYFKKSQPNPEVFHTDSIVDLVKLHKSGVNVFPENVDVVTGGFPCQDFSV 154 Query: 82 AG 83 +G Sbjct: 155 SG 156 >gi|302534627|ref|ZP_07286969.1| predicted protein [Streptomyces sp. C] gi|302443522|gb|EFL15338.1| predicted protein [Streptomyces sp. C] Length = 194 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +L+I +L G GG L + + +E P +P+ GDI +I Sbjct: 25 LLEILELCAGYGG--LGMAVA-PLVGGRIAYVAESAPGPSAVLAERYPDAPNLGDIREID 81 Query: 61 -TQDIPDHDVLLAGFPCQPFSQAG 83 TQ + DV+ AGFPCQ S AG Sbjct: 82 WTQLVGKVDVITAGFPCQDISIAG 105 >gi|14330659|emb|CAC41108.1| site-specific DNA-methyltransferase (cytosine-specific) [Klebsiella pneumoniae] Length = 375 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 11/86 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + FCG GG+ L L+Q + + +IN +V+TY N N D + + Sbjct: 10 LTCIEGFCGAGGMSLGLKQA----GFDVRLAFDINENAVETYNKNIGNHCEKLDASIVSG 65 Query: 62 QDIPD-------HDVLLAGFPCQPFS 80 + + + D+ G PCQ FS Sbjct: 66 KFLLEKAGIKTRLDLFSGGPPCQGFS 91 >gi|78189586|ref|YP_379924.1| C-5 cytosine-specific DNA methylase [Chlorobium chlorochromatii CaD3] gi|78171785|gb|ABB28881.1| C-5 cytosine-specific DNA methylase [Chlorobium chlorochromatii CaD3] Length = 359 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCGIGG+ L+++ ++ +I+ +++ N I DI K++ +++ Sbjct: 10 IDLFCGIGGLTYGLKKS----GIQVKAGIDIDESCRYSFEENCGTKFINKDIQKLQKEEL 65 Query: 65 P------DHDVLLAGFPCQPFS 80 + +L+ PCQPFS Sbjct: 66 NSIYGNAEIKILVGCAPCQPFS 87 >gi|254671508|emb|CBA09095.1| site-specific DNA-methyltransferase [Neisseria meningitidis alpha153] Length = 258 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 11/75 (14%) Query: 16 LDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDIPDH------D 68 + EQ + S E+ +TY+ NFP+ L+ D+ + QD+ + D Sbjct: 1 MGFEQA----GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLTEQDLINCLNGQAVD 56 Query: 69 VLLAGFPCQPFSQAG 83 +++ G PCQ FS AG Sbjct: 57 LIIGGPPCQGFSMAG 71 >gi|209543149|ref|YP_002275378.1| C-5 cytosine-specific DNA methylase [Gluconacetobacter diazotrophicus PAl 5] gi|209530826|gb|ACI50763.1| C-5 cytosine-specific DNA methylase [Gluconacetobacter diazotrophicus PAl 5] Length = 484 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGI-GGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++ DLF G GG L L + + EI P+ Y N P+ ++ D+ + Sbjct: 17 FRVLDLFAGAAGGWTLGLHRA----GFVTVAACEIVPWRRVLYAENNPHVRLYDDVRTLT 72 Query: 61 TQDIPD-----HDVLLAGFPCQPFSQA 82 + D++ PCQ S A Sbjct: 73 AGRLVSDLGFLPDLIAGSPPCQDISSA 99 >gi|163855609|ref|YP_001629907.1| putative C-5 cytosine-specific DNA methylase [Bordetella petrii DSM 12804] gi|163259337|emb|CAP41637.1| putative C-5 cytosine-specific DNA methylase [Bordetella petrii] Length = 189 Score = 71.7 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ + GI + + + SEI+P+ ++P+ GD+ I Sbjct: 6 LQYGSVCSGI----EAVSLAWKPLGWHPAWFSEIDPFPNAVLAHHYPDVPNLGDMTGIAD 61 Query: 62 QDI----PDHDVLLAGFPCQPFSQAG 83 Q + P D+L+ G PCQ FS AG Sbjct: 62 QILAGTAPAPDILVGGTPCQAFSVAG 87 >gi|189233760|ref|XP_001814230.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase [Tribolium castaneum] Length = 1187 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 13/89 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D+F G GG+ ++ E + ++ T++ N +F D + Sbjct: 735 LKCLDVFAGCGGLSQGFHAAGVAN---TKWAIENDKPALDTFRHNNRTCHVFRDDCNVLL 791 Query: 62 QDI----------PDHDVLLAGFPCQPFS 80 +++ + ++++ G PCQ FS Sbjct: 792 RNVMSGKGGLPPKSEVEMIVGGPPCQGFS 820 >gi|325269501|ref|ZP_08136117.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM 16608] gi|324988120|gb|EGC20087.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM 16608] Length = 388 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 5/79 (6%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKIKTQDIP 65 F GIG I ++ + NVE F+ +I+ K Y AN+ DI + + Sbjct: 39 FSGIGAIEHAFKRL--NLNVEIVFAGDIDANCKKAYFANYKISEEQWHTDIQNLDARPYK 96 Query: 66 -DHDVLLAGFPCQPFSQAG 83 D+ + G PCQ FS G Sbjct: 97 GKVDLFVGGAPCQAFSIVG 115 >gi|157827940|ref|YP_001494182.1| site-specific DNA methylase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932629|ref|YP_001649418.1| hypothetical protein RrIowa_0090 [Rickettsia rickettsii str. Iowa] gi|157800421|gb|ABV75674.1| Site-specific DNA methylase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907716|gb|ABY72012.1| hypothetical protein RrIowa_0090 [Rickettsia rickettsii str. Iowa] Length = 65 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I+ + Y+ NF + +GDI +I IP HD+L AGFPCQ FS +G Sbjct: 5 IDKDVQEAYKRNFGDKP-YGDIMEISETKIPKHDILCAGFPCQSFSISG 52 >gi|325685522|gb|EGD27614.1| modification methylase BbvI [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 380 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 14/97 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQT------FNHRNVECFFSSEINPYSVKTYQANFPN----- 49 + + +LF G GG + + +++E +P +V+TY+ N N Sbjct: 2 IFRTAELFSGPGGGAYAAKTSHFVDDKGEEWGFSHAWANEYDPDTVETYKLNILNNPDAK 61 Query: 50 TLIFGDIAKIKTQD---IPDHDVLLAGFPCQPFSQAG 83 T+ D+ K D + + D L+ GFPC +S G Sbjct: 62 TVYCEDVRKFNLDDDEKLGNIDALIFGFPCNDYSVVG 98 >gi|323949009|gb|EGB44903.1| DNA adenine methylase [Escherichia coli H252] Length = 762 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ + GI + + + +EI P+ +P+ GD+ K+ Sbjct: 7 LRYGSVCSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLAHRWPHVANLGDMTKLAK 62 Query: 62 Q----DIPDHDVLLAGFPCQPFSQAG 83 + +I DVL+ G PCQ FS AG Sbjct: 63 KVLAGEIESPDVLVGGTPCQAFSIAG 88 >gi|254901064|ref|ZP_05260988.1| DNA-methyltransferase (cytosine-specific) [Listeria monocytogenes J0161] Length = 320 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++I +LF GIG R LE +++ EI P++V+ Y F N + D+ K Sbjct: 1 MVQILELFGGIGAPRKALENLG--VDIKSLDYVEILPFAVQAYNNIFSNDYVAQDVTKWN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+L+ G PCQ +S+ G Sbjct: 59 MS----VDLLIHGSPCQDWSKNG 77 >gi|293596744|ref|ZP_05263998.2| DNA-methyltransferase [Listeria monocytogenes J2818] gi|293592003|gb|EFG00338.1| DNA-methyltransferase [Listeria monocytogenes J2818] Length = 327 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++I +LF GIG R LE +++ EI P++V+ Y F N + D+ K Sbjct: 8 MVQILELFGGIGAPRKALENLG--VDIKSLDYVEILPFAVQAYNNIFSNDYVAQDVTKWN 65 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+L+ G PCQ +S+ G Sbjct: 66 MS----VDLLIHGSPCQDWSKNG 84 >gi|83955480|ref|ZP_00964111.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. NAS-14.1] gi|83840124|gb|EAP79299.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. NAS-14.1] Length = 384 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 7/83 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT 61 + FCG G +R L+ +C +++I+ K Y N+ + GDIA + Sbjct: 10 TYAEFFCGGGMVRAALQ-----DRWDCVLANDIDAMKCKVYAQNWGQAALHQGDIAAMPD 64 Query: 62 QDI-PDHDVLLAGFPCQPFSQAG 83 + D+ A PCQ FS AG Sbjct: 65 DLLARQIDMYWASSPCQDFSLAG 87 >gi|260429702|ref|ZP_05783678.1| site-specific DNA methylase [Citreicella sp. SE45] gi|260419185|gb|EEX12439.1| site-specific DNA methylase [Citreicella sp. SE45] Length = 330 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 8/85 (9%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDIAKI 59 L G GG+ L L E + Y+ A + ++ D+ Sbjct: 23 LSLCSGAGGLDLGLHLAL--PGYRTVGHVERDAYAAAILVARMEDAALDRAPVWDDVGTF 80 Query: 60 KTQDIPD-HDVLLAGFPCQPFSQAG 83 + D++ AG+PCQPFS AG Sbjct: 81 DGRAWRGAVDIVTAGYPCQPFSVAG 105 >gi|254456632|ref|ZP_05070061.1| modification methylase [Candidatus Pelagibacter sp. HTCC7211] gi|207083634|gb|EDZ61060.1| modification methylase [Candidatus Pelagibacter sp. HTCC7211] Length = 380 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 18/95 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--------NFPNTLIF 53 +K DLF G GG+ ++ + + + T N Sbjct: 3 IKFIDLFSGCGGLTEAFLNNKKFSPIKII---DNDKFCYDTTIHRLKKLKFKNPEKIAQL 59 Query: 54 GDIAKIKTQDIPDH-----DVLLAGFPCQPFSQAG 83 DI+ + I D D+++ G PCQ +S AG Sbjct: 60 KDIS--SNKTINDFKNIKSDIVIGGPPCQAYSVAG 92 >gi|311977244|gb|ADQ20500.1| M1.BfuAI [Lysinibacillus fusiformis] Length = 357 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 L DLF L Q + FS EI+ +V+T+ NFP+ +F DI + Sbjct: 3 LNAVDLFS----GAGGLLQGLLQTDYNVLFSVEIDKAAVRTHLENFPDIPVFDDDIRNLT 58 Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83 + + + D+++ G PCQ FS G Sbjct: 59 KEKMVELTKNSEIDLVVGGPPCQGFSVFG 87 >gi|163941367|ref|YP_001646251.1| C-5 cytosine-specific DNA methylase [Bacillus weihenstephanensis KBAB4] gi|163863564|gb|ABY44623.1| C-5 cytosine-specific DNA methylase [Bacillus weihenstephanensis KBAB4] Length = 251 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DL GI GI + ++ EI ++ + N+PN IF D+ K+ Sbjct: 1 MKMLDLCSGIAGISM----AAGWAGIDTAAFCEIEEFNQSVLRKNYPNIPIFPDLYKLTK 56 Query: 62 QDIPD--HD-----VLLAGFPCQPFSQAG 83 Q + D D V+ AG+PCQ S G Sbjct: 57 QSLIDGGVDVDSIGVISAGYPCQGESLVG 85 >gi|119511510|ref|ZP_01630619.1| type II DNA modification enzyme (methyltransferase) [Nodularia spumigena CCY9414] gi|119463821|gb|EAW44749.1| type II DNA modification enzyme (methyltransferase) [Nodularia spumigena CCY9414] Length = 371 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 6/80 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLF G GG+ L E T + EI S TY+ N ++ + Sbjct: 27 VIDLFGGCGGLALGFEAT----GFQTIGY-EILADSRATYEHNLLGVCNQVNLTPF-SNL 80 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 + V++ G PCQPFS +G Sbjct: 81 VEGAAVIIGGPPCQPFSVSG 100 >gi|332138119|pdb|3AV4|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 gi|332138120|pdb|3AV5|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With Adohcy gi|332138121|pdb|3AV6|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With Adomet Length = 1330 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 852 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 907 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 908 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 943 >gi|315583649|pdb|3PT9|A Chain A, Crystal Structure Of Mouse Dnmt1(731-1602) In The Free State Length = 873 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 413 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 468 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 469 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 504 >gi|315583643|pdb|3PT6|A Chain A, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With Dna gi|315583644|pdb|3PT6|B Chain B, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With Dna Length = 954 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 494 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 549 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 550 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 585 >gi|313661497|ref|NP_001186361.1| DNA (cytosine-5)-methyltransferase 1 isoform 3 [Mus musculus] Length = 1501 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1023 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1078 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1079 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1114 >gi|327180734|ref|NP_034196.5| DNA (cytosine-5)-methyltransferase 1 isoform 2 [Mus musculus] Length = 1619 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1141 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1196 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1197 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1232 >gi|148693195|gb|EDL25142.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_d [Mus musculus] Length = 1619 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1141 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1196 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1197 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1232 >gi|148693196|gb|EDL25143.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_e [Mus musculus] Length = 1604 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1126 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1181 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1182 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1217 >gi|148693197|gb|EDL25144.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_f [Mus musculus] Length = 1638 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1160 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1215 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1216 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1251 >gi|148693194|gb|EDL25141.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_c [Mus musculus] Length = 1683 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1205 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1260 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1261 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1296 >gi|148693193|gb|EDL25140.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_b [Mus musculus] Length = 1645 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1167 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1222 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1223 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1258 >gi|31419356|gb|AAH53047.1| Dnmt1 protein [Mus musculus] Length = 1627 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1149 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1204 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1205 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1240 >gi|2689716|gb|AAC40061.1| DNA (cytosine-5)-methyltransferase [Mus musculus] Length = 1502 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1024 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1079 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1080 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1115 >gi|313661499|ref|NP_001186362.1| DNA (cytosine-5)-methyltransferase 1 isoform 4 [Mus musculus] gi|7339827|gb|AAF60965.1| DNA methyltransferase [Mus musculus] gi|9719249|gb|AAF97695.1| DNA (cytosine-5)-methyltransferase [Mus musculus] gi|148693192|gb|EDL25139.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus] gi|148693198|gb|EDL25145.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus] Length = 1502 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1024 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1079 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1080 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1115 >gi|74151181|dbj|BAE27713.1| unnamed protein product [Mus musculus] Length = 1619 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1141 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1196 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1197 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1232 >gi|1765919|emb|CAA32910.1| DNA methyltransferase 1 [Mus musculus] Length = 1620 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1142 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1197 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1198 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1233 >gi|327180732|ref|NP_001186360.2| DNA (cytosine-5)-methyltransferase 1 isoform 1 [Mus musculus] gi|20141336|sp|P13864|DNMT1_MOUSE RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1; Short=Met-1; AltName: Full=DNA methyltransferase MmuI; Short=DNA MTase MmuI; Short=M.MmuI; AltName: Full=MCMT gi|6625687|gb|AAF19352.1| DNA methyltransferase [Mus musculus] gi|37574019|gb|AAH48148.2| DNA methyltransferase (cytosine-5) 1 [Mus musculus] Length = 1620 Score = 71.3 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1142 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1197 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1198 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1233 >gi|229820628|ref|YP_002882154.1| C-5 cytosine-specific DNA methylase [Beutenbergia cavernae DSM 12333] gi|229566541|gb|ACQ80392.1| C-5 cytosine-specific DNA methylase [Beutenbergia cavernae DSM 12333] Length = 316 Score = 71.3 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF G GG+ L +E F+ E + SE+N + + ++P+ GDI + Sbjct: 12 LRVGPLFSGRGGLDLAVEHVFSA---ETIWFSELNETVARIFGRHWPDAPNLGDITAMDR 68 Query: 62 QDIPDHDVLLAGFPCQ 77 + D+L FPCQ Sbjct: 69 RAAAPVDILTGVFPCQ 84 >gi|160883583|ref|ZP_02064586.1| hypothetical protein BACOVA_01555 [Bacteroides ovatus ATCC 8483] gi|156110996|gb|EDO12741.1| hypothetical protein BACOVA_01555 [Bacteroides ovatus ATCC 8483] Length = 417 Score = 70.9 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 36/103 (34%), Gaps = 30/103 (29%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----------FPNTLI 52 + DLF G GG+ L L + F+ E + +T + N +P L Sbjct: 9 VIDLFSGCGGLSLGLHKA----GWRGLFAVEKCTDAFETLKYNLIDNKTDPHFQWPKWLP 64 Query: 53 FGDIAKIKTQDI------------PDHDVLLAGFPCQPFSQAG 83 I + + D++ G PCQ FS AG Sbjct: 65 ---IKNWEIDTLLENYSFQLSNLRNKIDLVAGGPPCQGFSMAG 104 >gi|289192310|ref|YP_003458251.1| DNA-cytosine methyltransferase [Methanocaldococcus sp. FS406-22] gi|288938760|gb|ADC69515.1| DNA-cytosine methyltransferase [Methanocaldococcus sp. FS406-22] Length = 363 Score = 70.9 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 62/140 (44%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--------- 51 MLK DLFCG GG + E + E+N + +Y NF + Sbjct: 1 MLKFIDLFCGCGGFSRGFVE----EGFEPLVAIELNEDAAFSYALNFNGKIYEKIRPGEF 56 Query: 52 -------------------------------------------IFGDIAKIKTQDIPDH- 67 I DI +I +I Sbjct: 57 KLRELKGYVGIYSFKFPFEEEDIKWLKNLGTLNEKTEKLSPVVINDDIREIHALEIEKFC 116 Query: 68 -----DVLLAGFPCQPFSQA 82 DV++ G PC+ ++ A Sbjct: 117 KNKKVDVIIGGPPCEGYTGA 136 >gi|330891417|gb|EGH24078.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. mori str. 301020] Length = 201 Score = 70.9 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 + ++ G GG L LE E EI P + T + N P+ + D+ + Sbjct: 10 LFTSLEMCAGAGGQALGLEMAG--FGHEVL--VEIEPPACATLRLNRPDWNVQEQDLRQF 65 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 D++ G PC PFS+AG Sbjct: 66 NGLPYFGVDLVAGGVPCPPFSKAG 89 >gi|237704019|ref|ZP_04534500.1| DNA methyltransferase [Escherichia sp. 3_2_53FAA] gi|20068985|gb|AAM09639.1|AF458982_2 m5 cytosine DNA methyltransferase [Escherichia coli] gi|226901931|gb|EEH88190.1| DNA methyltransferase [Escherichia sp. 3_2_53FAA] gi|281181427|dbj|BAI57757.1| methyltransferase [Escherichia coli SE15] gi|315286888|gb|EFU46305.1| C-5 cytosine-specific DNA methylase [Escherichia coli MS 110-3] gi|323955407|gb|EGB51176.1| C-5 cytosine-specific DNA methylase [Escherichia coli H263] Length = 396 Score = 70.9 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 17/93 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT-Q 62 DLF G GG+ L + +++I ++TY N ++ G I+ +T Sbjct: 151 YIDLFSGAGGLGLGFKWA----GWTPLLANDIEEKYLQTYSNNVHKEVLCGSISDNETFS 206 Query: 63 DIPD---------HD---VLLAGFPCQPFSQAG 83 I D D +L G PCQ FS AG Sbjct: 207 KIADKISGFKKLYFDKQLWILGGPPCQGFSTAG 239 >gi|16077673|ref|NP_388487.1| DNA-methyltransferase [Bacillus subtilis subsp. subtilis str. 168] gi|221308442|ref|ZP_03590289.1| hypothetical protein Bsubs1_03403 [Bacillus subtilis subsp. subtilis str. 168] gi|221312764|ref|ZP_03594569.1| hypothetical protein BsubsN3_03379 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317687|ref|ZP_03598981.1| hypothetical protein BsubsJ_03338 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321963|ref|ZP_03603257.1| hypothetical protein BsubsS_03409 [Bacillus subtilis subsp. subtilis str. SMY] gi|81669163|sp|O34939|YDIO_BACSU RecName: Full=Probable BsuMI modification methylase subunit ydiO; Short=M1.BsuMI; AltName: Full=Cytosine-specific methyltransferase M1.BsuMI gi|2521997|dbj|BAA22750.1| ydiO [Bacillus subtilis] gi|2632919|emb|CAB12425.1| DNA-methyltransferase (cytosine-specific) [Bacillus subtilis subsp. subtilis str. 168] Length = 427 Score = 70.9 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 18/97 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANF-PNTLIFGDIAK 58 + I DLF G GG+ L + + + F+ ++N ++ Y+ NF P+ + I K Sbjct: 84 INIADLFSGCGGLSLGVWEACRALGINPRFSFACDLNEAALSVYEKNFSPDFSLNESIEK 143 Query: 59 -----------IKTQDIPD----HDVLLAGFPCQPFS 80 ++ Q I D D +LAG PCQ S Sbjct: 144 HINGELGAPLTVEEQRIKDKVKKIDFILAGPPCQGHS 180 >gi|320009547|gb|ADW04397.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC 33331] Length = 431 Score = 70.9 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L++ ++ G GG L LE+ E + E++P + +T + N P + GD+A Sbjct: 4 LQVAEICAGAGGQALGLERA----GFEHAVAVELDPTAAQTLKRNMPGCDVRTGDVADRS 59 Query: 61 TQDIPDH-------DVLLAGFPCQPFSQAG 83 D D++ G PC PF+ AG Sbjct: 60 IWDPEQFCAEHGTPDLIAGGVPCPPFTIAG 89 >gi|15966901|ref|NP_387254.1| putative cytosine-specific methyltransferase protein [Sinorhizobium meliloti 1021] gi|15076174|emb|CAC47727.1| Putative cytosine-specific methyltransferase [Sinorhizobium meliloti 1021] Length = 440 Score = 70.9 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 25/101 (24%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-------- 55 DLF G GG+ L L Q F+ E + + +T+ NF + D Sbjct: 6 FADLFSGCGGLSLGLTQAGLKGQ----FAIERDAMAFRTFATNFIDARGASDRFEWPAWL 61 Query: 56 ------IAKIKTQDIPD-------HDVLLAGFPCQPFSQAG 83 I ++ + DVL G PCQ FS AG Sbjct: 62 ERRAWGIEELLEYHGKELLGLRGTIDVLAGGPPCQGFSFAG 102 >gi|321469202|gb|EFX80183.1| hypothetical protein DAPPUDRAFT_346987 [Daphnia pulex] Length = 1400 Score = 70.9 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 18/94 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57 LK D+F G GG+ L Q+ + +++ E P + + ++ N P+ +F D Sbjct: 926 LKTLDIFAGCGGLSEGLHQSGVA---KTYWAIECEPTAAQAFRLNNPDAAVFTDDCNTIL 982 Query: 58 --------KIKTQDIPDHD---VLLAGFPCQPFS 80 + Q +P D +L G PCQ FS Sbjct: 983 KMAIDGQLEQNGQVLPPKDGVELLCGGPPCQGFS 1016 >gi|196048067|ref|ZP_03115245.1| DNA-cytosine methyltransferase [Bacillus cereus 03BB108] gi|196021323|gb|EDX60052.1| DNA-cytosine methyltransferase [Bacillus cereus 03BB108] Length = 427 Score = 70.9 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 6/70 (8%) Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDIPDHD-----VLL 71 L+ F+ + + EIN + KTY+ N P+T+++ DI + +I +LL Sbjct: 18 LDTGFSLQGFNLKLAIEINSDACKTYKVNHPDTIVWNRDIKTVTGDEILSITKNNPIILL 77 Query: 72 AGFPCQPFSQ 81 G PCQ FS Sbjct: 78 GGSPCQSFSI 87 >gi|182436696|ref|YP_001824415.1| hypothetical protein SGR_2903 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465212|dbj|BAG19732.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 359 Score = 70.9 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ L G GG+ L +E +PY+ + A+ P GDI + Sbjct: 15 LRAVALCAGYGGLETAL---GAGIGAVPVAYAENDPYAAAVFAAHHPGVPNLGDITRADW 71 Query: 62 QDIPDH---DVLLAGFPCQPFSQAG 83 + + D +++ AGFPC+ S AG Sbjct: 72 ERVRDLYRPEIVGAGFPCRNISNAG 96 >gi|331085772|ref|ZP_08334855.1| hypothetical protein HMPREF0987_01158 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406695|gb|EGG86200.1| hypothetical protein HMPREF0987_01158 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 411 Score = 70.9 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 38/112 (33%), Gaps = 33/112 (29%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK-IK 60 +K DLF G GG+ EQ+ + + E K + + + D + + Sbjct: 6 IKSIDLFAGCGGLMDGFEQSGY---YDTVAAVEWEKAPCKNLENRLKSKWEYKDAEQRVL 62 Query: 61 TQDI-------------PD----------------HDVLLAGFPCQPFSQAG 83 DI PD DV++ G PCQ +S AG Sbjct: 63 RFDIQRTEELFSGWVNDPDYGSSVGLDKLINNVGGIDVIIGGPPCQAYSIAG 114 >gi|83718377|ref|YP_439560.1| DNA methyltransferase [Burkholderia thailandensis E264] gi|83652202|gb|ABC36266.1| DNA methyltransferase [Burkholderia thailandensis E264] Length = 535 Score = 70.9 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 10/86 (11%) Query: 2 LKIT--DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 L++ + GI ++ + SEI + + ++P GD+ + Sbjct: 59 LRMIYGSVCSGI----EAATVAWHPLGWRPAWFSEIERFPCAVLRHHYPTVPNLGDMKRF 114 Query: 60 KTQDIPDH--DVLLAGFPCQPFSQAG 83 K + PD D+L+ G PCQ FS AG Sbjct: 115 K--EWPDAAIDLLVGGTPCQSFSVAG 138 >gi|302187943|ref|ZP_07264616.1| C-5 cytosine-specific DNA methylase family protein [Pseudomonas syringae pv. syringae 642] Length = 307 Score = 70.9 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI 59 M DLF G+GG + V+ +++ P +V+ + AN P+ + D+ + Sbjct: 1 MHTAIDLFAGLGGWSSGARRA----GVKVLWAANHWPVAVEWHSANHPDAIHVCQDLHQA 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 +P HD++LA CQ S+A Sbjct: 57 DWSTVPAHDIMLASPCCQGHSKA 79 >gi|155370846|ref|YP_001426380.1| hypothetical protein FR483_N748L [Paramecium bursaria Chlorella virus FR483] gi|155124166|gb|ABT16033.1| hypothetical protein FR483_N748L [Paramecium bursaria Chlorella virus FR483] Length = 349 Score = 70.9 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 8/83 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + +LF G+GGI L E + + + N + GDI K Sbjct: 1 MNALELFAGVGGITHGLRGYVTPHAF-----VEYETEASEFLK--HKNKPVHGDITKFDA 53 Query: 62 QDIPD-HDVLLAGFPCQPFSQAG 83 + D++ AG+PC FS AG Sbjct: 54 SEYKGIVDIVTAGWPCTGFSTAG 76 >gi|330882498|gb|EGH16647.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 335 Score = 70.9 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 7/86 (8%) Query: 1 MLKITDL--FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIA 57 M + T L G GG L LE E EI P + T + N P + D+ Sbjct: 18 MSRFTSLEMCAGAGGQALGLEMAG--FGHEAL--VEIEPPACATLRLNRPEWNVKEEDLR 73 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + D++ G PC PFS+AG Sbjct: 74 QFNGSPFFGVDLVAGGVPCPPFSKAG 99 >gi|15669386|ref|NP_248195.1| type II R/M system modification methyltransferase [Methanocaldococcus jannaschii DSM 2661] gi|2500154|sp|Q58600|MT52_METJA RecName: Full=Probable modification methylase MJ1200; AltName: Full=Cytosine-specific methyltransferase MJ1200; AltName: Full=M.MjaVIIP gi|1591829|gb|AAB99203.1| modification methylase, type II R/M system [Methanocaldococcus jannaschii DSM 2661] Length = 366 Score = 70.9 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 62/140 (44%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----------- 49 MLK DLFCG GG + E + E+N + +Y NF Sbjct: 4 MLKFIDLFCGCGGFSRGFVE----EGFEPLVAIELNEDAAFSYALNFNGQIYEKIRPGEF 59 Query: 50 -----------------------------------------TLIFGDIAKIKTQDIPDH- 67 +I DI +I +I Sbjct: 60 KLKELKGYVGIYPFKFPFEEEDIKWLKRLGTLNEKTKKLSPVVINDDIREIHAIEIEKFI 119 Query: 68 -----DVLLAGFPCQPFSQA 82 DV++ G PC+ ++ A Sbjct: 120 KNKKVDVIIGGPPCEGYTGA 139 >gi|330989663|gb|EGH87766.1| cytosine-specific methyltransferase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 512 Score = 70.6 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 L+ + GI ++ +E + +EI P+ ++P T GD+ K+ Sbjct: 10 LQYGSVCSGI----EAATAAWHPLGMEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGA 65 Query: 61 ---TQDIPDHDVLLAGFPCQPFSQAG 83 I DVL+ G PCQ FS AG Sbjct: 66 LALAGKIKAPDVLVGGTPCQAFSVAG 91 >gi|213967437|ref|ZP_03395585.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato T1] gi|213927738|gb|EEB61285.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato T1] Length = 498 Score = 70.6 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L+ + GI ++ +E + +EI P+ ++P T GD+ K Sbjct: 10 LQYGSVCSGI----EAATAAWHPLGMEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGA 65 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 + I DVL+ G PCQ FS AG Sbjct: 66 LVLAGKIDAPDVLVGGTPCQAFSVAG 91 >gi|219847398|ref|YP_002461831.1| DNA-cytosine methyltransferase [Chloroflexus aggregans DSM 9485] gi|219541657|gb|ACL23395.1| DNA-cytosine methyltransferase [Chloroflexus aggregans DSM 9485] Length = 392 Score = 70.6 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAK 58 L + + F GIG +R+ L+ + F+++I+ + Y+A FP+ + DI Sbjct: 8 LTVAEYFAGIGLVRMGLQS----YGWKVIFANDISKKKFEMYKAFFPDAEAHYVTADIFD 63 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I +P + FPC S AG Sbjct: 64 IDPTVVPLTTLATCSFPCIDLSLAG 88 >gi|332310450|gb|EGJ23545.1| DNA-methyltransferase (Dcm) [Listeria monocytogenes str. Scott A] Length = 325 Score = 70.6 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++I +LF GIG R LE +++ EI P++V+ Y F N + D+ K Sbjct: 1 MVQILELFGGIGAPRKALENLG--VDIKSLDYVEILPFAVQAYNNIFSNDYVPQDVTKWN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+L+ G PCQ +S+ G Sbjct: 59 MS----VDLLIHGSPCQDWSKNG 77 >gi|254933776|ref|ZP_05267135.1| DNA-cytosine methyltransferase [Listeria monocytogenes HPB2262] gi|293585336|gb|EFF97368.1| DNA-cytosine methyltransferase [Listeria monocytogenes HPB2262] Length = 325 Score = 70.6 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++I +LF GIG R LE +++ EI P++V+ Y F N + D+ K Sbjct: 1 MVQILELFGGIGAPRKALENLG--VDIKSLDYVEILPFAVQAYNNIFSNDYVPQDVTKWN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D+L+ G PCQ +S+ G Sbjct: 59 MS----VDLLIHGSPCQDWSKNG 77 >gi|302793280|ref|XP_002978405.1| hypothetical protein SELMODRAFT_108655 [Selaginella moellendorffii] gi|300153754|gb|EFJ20391.1| hypothetical protein SELMODRAFT_108655 [Selaginella moellendorffii] Length = 336 Score = 70.6 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 16/93 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------PNTLIFGD 55 +++ LF GIGGI + LE+ S E N + ++ + ++ GD Sbjct: 209 IRVLSLFSGIGGIEVALEKLGIPIKF--LVSVETNADCHRVLRSWWHRTRQRGTHIVLGD 266 Query: 56 IAKIKTQDIPD--------HDVLLAGFPCQPFS 80 + ++ + I + D++ G PC FS Sbjct: 267 VTELSRERIEELAARAGGGFDLVAGGSPCNNFS 299 >gi|39995337|ref|NP_951288.1| type II DNA modification methyltransferase [Geobacter sulfurreducens PCA] gi|39982099|gb|AAR33561.1| type II DNA modification methyltransferase, putative [Geobacter sulfurreducens PCA] Length = 305 Score = 70.6 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 ++ +LFCGIGG +E T V + + + ++ TY+ NFP D+ ++ Sbjct: 1 MRAVELFCGIGGFAAAVEGT----GVRVVAAMDQDEAALATYRLNFPGHGARKVDLERVS 56 Query: 61 TQDI--PDHDVLLAGFPCQPFSQAG 83 ++ D+ PCQP+ + G Sbjct: 57 AWELTAGGVDLWWLSPPCQPYCERG 81 >gi|294084926|ref|YP_003551686.1| DNA-cytosine methyltransferase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664501|gb|ADE39602.1| DNA-cytosine methyltransferase [Candidatus Puniceispirillum marinum IMCC1322] Length = 393 Score = 70.6 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 19/97 (19%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 + + F G GG + + ++E P +V+TY+ N+P+T++ DI KI Sbjct: 27 LFTVVSTFAGGGGSSTG----YKLAGGKVLAANEFVPEAVETYKQNYPDTIVDSSDIRKI 82 Query: 60 KTQ--------------DIPDHDVLLAGFPCQPFSQA 82 + + D+L PC FS+A Sbjct: 83 TGSKKEGVLSWFRSFGVEQGELDILDGSPPCATFSKA 119 >gi|297621903|ref|YP_003710040.1| C-5 cytosine-specific DNA methylase [Waddlia chondrophila WSU 86-1044] gi|297377204|gb|ADI39034.1| C-5 cytosine-specific DNA methylase [Waddlia chondrophila WSU 86-1044] Length = 410 Score = 70.6 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 33 SEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +EI+ S T + N P+ +I GDI I + D L GFPCQ FS AG Sbjct: 104 NEIDKSSCMTLRKNRPSWNVIEGDIKSIDFRQFKGIDFLSGGFPCQAFSYAG 155 >gi|326428358|gb|EGD73928.1| hypothetical protein PTSG_05624 [Salpingoeca sp. ATCC 50818] Length = 512 Score = 70.6 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 L++ + + GIGG+ L+ + +IN + K Y+ NFP T ++ I I Sbjct: 18 LRVLEFYSGIGGMHAALKVA--DPTARVLRAFDINDTANKVYRHNFPETPVWQRLIESIP 75 Query: 61 TQDIP---DHDVLLAGFPCQPFSQAG 83 + D+ L PCQPF++ G Sbjct: 76 RERFEGKLQADMYLMSPPCQPFTRTG 101 >gi|315917403|ref|ZP_07913643.1| type II restriction-modification system methylation subunit [Fusobacterium gonidiaformans ATCC 25563] gi|313691278|gb|EFS28113.1| type II restriction-modification system methylation subunit [Fusobacterium gonidiaformans ATCC 25563] Length = 320 Score = 70.6 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI +LF GIG IR + + EI+ VK+Y A + I Sbjct: 7 IKIIELFGGIGAIRKAFIR--QKIPHQVIDYVEIDKNCVKSYNALYNTDFKPKSILDFHP 64 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D D+L+ G PCQ FS++G Sbjct: 65 PD-ERIDLLMHGSPCQDFSRSG 85 >gi|119716511|ref|YP_923476.1| DNA-cytosine methyltransferase [Nocardioides sp. JS614] gi|119537172|gb|ABL81789.1| DNA-cytosine methyltransferase [Nocardioides sp. JS614] Length = 399 Score = 70.6 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 21/96 (21%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNT--------- 50 +LF G GG+ + L + +E+N + T +AN P+ Sbjct: 18 IELFSGGGGLAMALHEA----GFRHLLLNELNKRACATLRANNAVDYLPDETPPATLADP 73 Query: 51 --LIFGDIAKIKTQDI-PDHDVLLAGFPCQPFSQAG 83 LI G I ++ D DV+ G PCQPFS G Sbjct: 74 WPLIEGGIGEVDFTPFLGDVDVVAGGVPCQPFSLGG 109 >gi|306821027|ref|ZP_07454646.1| possible DNA (cytosine-5-)-methyltransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550968|gb|EFM38940.1| possible DNA (cytosine-5-)-methyltransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 317 Score = 70.6 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + +LF GIG +R L + + EI+ VK+Y A + DI K Sbjct: 10 NVLELFGGIGALRKALIR--QKIPHKVVDYVEIDKNCVKSYNALYNADFTPKDIVKYHAP 67 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+L+ G PCQ FS+ G Sbjct: 68 N-ERVDLLMHGSPCQDFSRIG 87 >gi|17232307|ref|NP_488855.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] gi|17133952|dbj|BAB76514.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] Length = 414 Score = 70.6 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 7/66 (10%) Query: 25 RNVECFFSSEINPYSVKTYQANFPN-TLIFGDI----AKIKTQDIPDH--DVLLAGFPCQ 77 S EI+ ++ T + N P+ T+I DI + ++I + D+++ G PCQ Sbjct: 26 AGFSVPLSVEIDTWACDTLRYNRPDSTVIQNDIGNFSTENDVKNICNFKPDIIIGGPPCQ 85 Query: 78 PFSQAG 83 FS AG Sbjct: 86 GFSIAG 91 >gi|281420885|ref|ZP_06251884.1| modification methylase DdeI [Prevotella copri DSM 18205] gi|281405177|gb|EFB35857.1| modification methylase DdeI [Prevotella copri DSM 18205] Length = 624 Score = 70.6 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 24/101 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTF---NHRNVECFFSSEINPYSVKTYQANF------PNTLI 52 + DLF G GG Q + + N +S+IN T++ + + Sbjct: 14 ITYLDLFAGAGGFSEGFMQAYTDDKYYNFR--LASDINENCELTHRVRYNKMLGLDTKFM 71 Query: 53 FGDI----------AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI +I Q+I DV+ G CQ FS AG Sbjct: 72 CQDIMEDSFLPNLLKEIGNQEI---DVVTGGPSCQSFSLAG 109 >gi|284054995|ref|ZP_06385205.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] Length = 74 Score = 70.6 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 DLF G GG+ LE EC + + +++T+Q N P I GD+ +I T Sbjct: 8 TFIDLFSGAGGMSCGLEMA----GFECLLGVDFDKSAIQTFQNNHPQAETICGDLREIST 63 Query: 62 QDIPD 66 + I + Sbjct: 64 EQIRE 68 >gi|260890220|ref|ZP_05901483.1| modification methylase EcoRII [Leptotrichia hofstadii F0254] gi|260859840|gb|EEX74340.1| modification methylase EcoRII [Leptotrichia hofstadii F0254] Length = 293 Score = 70.6 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 29/47 (61%) Query: 37 PYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + KT+ N + L DI +K+ D+PD DV++ GFPCQ FS AG Sbjct: 5 KNAAKTFLKNNDSKLAVDDIHNVKSTDVPDTDVIVGGFPCQAFSIAG 51 >gi|328955052|ref|YP_004372385.1| DNA-cytosine methyltransferase [Coriobacterium glomerans PW2] gi|328455376|gb|AEB06570.1| DNA-cytosine methyltransferase [Coriobacterium glomerans PW2] Length = 353 Score = 70.6 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 6/79 (7%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKTQDI 64 + F G L ++++I+ Y+AN P+ L GDI+++ D+ Sbjct: 10 EFFAG-----SGLVGCGLAPWFRSVWANDISERKAAVYRANLDPSVLHVGDISRVSGADL 64 Query: 65 PDHDVLLAGFPCQPFSQAG 83 P + A FPCQ S AG Sbjct: 65 PAASLSWASFPCQDLSLAG 83 >gi|72091983|ref|XP_780273.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase isoform 1 [Strongylocentrotus purpuratus] gi|115972575|ref|XP_001178953.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase isoform 2 [Strongylocentrotus purpuratus] Length = 1618 Score = 70.6 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 LK D+F G GG+ Q E ++ E + + ++ N P + +F Sbjct: 1137 LKCLDVFAGCGGLSEGFHQAGI---CESSWAIEKEEPAAQAFRLNNPGSTVFSDDCNELL 1193 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 GD Q +P D ++L G PCQ FS Sbjct: 1194 RLVMQGDKTSRTGQKLPQKGDVELLCGGPPCQGFS 1228 >gi|115972577|ref|XP_001178888.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase isoform 1 [Strongylocentrotus purpuratus] Length = 1470 Score = 70.6 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 LK D+F G GG+ Q E ++ E + + ++ N P + +F Sbjct: 989 LKCLDVFAGCGGLSEGFHQAGI---CESSWAIEKEEPAAQAFRLNNPGSTVFSDDCNELL 1045 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 GD Q +P D ++L G PCQ FS Sbjct: 1046 RLVMQGDKTSRTGQKLPQKGDVELLCGGPPCQGFS 1080 >gi|302559403|ref|ZP_07311745.1| modification methylase NaeI [Streptomyces griseoflavus Tu4000] gi|302477021|gb|EFL40114.1| modification methylase NaeI [Streptomyces griseoflavus Tu4000] Length = 429 Score = 70.6 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 13/89 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK---I 59 + ++ G GG L LE+ E + E++ + T + N P ++ GD+A Sbjct: 6 VVEICAGAGGQALGLERA----GFEHALAVELDANAAATLRRNRPAWHVVEGDVADPGTW 61 Query: 60 KTQDIPDH-----DVLLAGFPCQPFSQAG 83 +D D+L G PC PF+ AG Sbjct: 62 TPEDYRTVNGEQLDLLAGGVPCPPFTIAG 90 >gi|153870986|ref|ZP_02000267.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] gi|152072545|gb|EDN69730.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] Length = 350 Score = 70.6 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 7/89 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHR-NVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 ++I F G GG+ + EQ + + FS++I Y +T N + DI ++ Sbjct: 114 IEIASYFTGAGGLDIGFEQASDDIIQFKTVFSTDIESYVEQTILTNRAEWDFLRADIREL 173 Query: 60 KTQDIP-----DHDVLLAGFPCQPFSQAG 83 + + +++ G PCQPFS AG Sbjct: 174 SPEIVRRKMGKKPYIIIGGPPCQPFSVAG 202 >gi|57242037|ref|ZP_00369977.1| cytosine specific DNA methyltransferase (DDEM) [Campylobacter upsaliensis RM3195] gi|57017229|gb|EAL54010.1| cytosine specific DNA methyltransferase (DDEM) [Campylobacter upsaliensis RM3195] Length = 125 Score = 70.6 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 14/91 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-----DIA 57 + + F G GG L Q + ++++ + ++KT + N L DI Sbjct: 4 NVVEFFVGAGGSHLGFMQ----EGFKTLYANDFDSNALKTLEHNNKKHLQNAILDSTDIT 59 Query: 58 KIKTQDIPD-----HDVLLAGFPCQPFSQAG 83 +I +++ DV+ C+ FS AG Sbjct: 60 QISPKELKKKLDSSVDVMFGDIVCKGFSLAG 90 >gi|320540918|ref|ZP_08040419.1| putative site-specific DNA methylase [Serratia symbiotica str. Tucson] gi|320029019|gb|EFW11197.1| putative site-specific DNA methylase [Serratia symbiotica str. Tucson] Length = 223 Score = 70.6 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKIKT 61 + F G G R L +C F+++ +P Y++N+ L+ DI I + Sbjct: 43 FYEFFAGGGMARAGL-----GAQWDCLFANDFSPMKGHAYRSNWSGGTDLLVEDINNITS 97 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 +P D++ A FPCQ S AG Sbjct: 98 AQLPAQADLVWASFPCQDLSLAG 120 >gi|302058959|ref|ZP_07250500.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato K40] Length = 498 Score = 70.6 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L+ + GI ++ +E + +EI P+ ++P T GD+ K Sbjct: 10 LQYGSVCSGI----EAATAAWHPLGMEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGA 65 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 + I DVL+ G PCQ FS AG Sbjct: 66 LVLAGKIDAPDVLVGGTPCQAFSVAG 91 >gi|257466246|ref|ZP_05630557.1| Type II restriction-modification system methylation subunit [Fusobacterium gonidiaformans ATCC 25563] Length = 327 Score = 70.6 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI +LF GIG IR + + EI+ VK+Y A + I Sbjct: 14 IKIIELFGGIGAIRKAFIR--QKIPHQVIDYVEIDKNCVKSYNALYNTDFKPKSILDFHP 71 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D D+L+ G PCQ FS++G Sbjct: 72 PD-ERIDLLMHGSPCQDFSRSG 92 >gi|323650454|gb|ADX97305.1| M.KasI [Kluyvera ascorbata] Length = 388 Score = 70.6 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 7/85 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 M + F G G R L + C F+++ + YQ N+ +F GD+ + Sbjct: 1 MKTFYEFFAGSGMARAGL-----GDSWTCVFANDFDHKKGVVYQQNWGEGDLFVGDVKTV 55 Query: 60 KTQDI-PDHDVLLAGFPCQPFSQAG 83 + + + +++ A FPCQ S AG Sbjct: 56 TQEQLSKNANLVWASFPCQDLSLAG 80 >gi|294678263|ref|YP_003578878.1| cytosine-specific DNA-methyltransferase [Rhodobacter capsulatus SB 1003] gi|294477083|gb|ADE86471.1| site-specific DNA-methyltransferase (cytosine-specific) [Rhodobacter capsulatus SB 1003] Length = 316 Score = 70.6 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 8/85 (9%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDIAKI 59 L G GG+ L L E ++ T A + ++ D+A Sbjct: 23 LSLCSGAGGLDLGLTIAI--PGYRAVGHVERETFAAATLVARMEDASLDRAPVWDDVATF 80 Query: 60 KTQDIPD-HDVLLAGFPCQPFSQAG 83 + D++ AG+PCQPFS AG Sbjct: 81 DGRPWRGAVDIVTAGYPCQPFSVAG 105 >gi|15894505|ref|NP_347854.1| DNA-methyltransferase (cytosine-specific) [Clostridium acetobutylicum ATCC 824] gi|15024146|gb|AAK79194.1|AE007635_8 DNA-methyltransferase (cytosine-specific) [Clostridium acetobutylicum ATCC 824] gi|325508636|gb|ADZ20272.1| DNA-methyltransferase (cytosine-specific) [Clostridium acetobutylicum EA 2018] Length = 314 Score = 70.6 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++K +LF GIG R + +++ EI+P VKTY F L++ I Sbjct: 6 IIKTLELFGGIGAPRKAFKNIG--IDIKAIDYVEIDPKPVKTYNEMFKKDLMYKTQNVIG 63 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 P DVL+ G PCQ FS AG Sbjct: 64 YNLKP--DVLIHGSPCQDFSIAG 84 >gi|23100791|ref|NP_694258.1| cytosine-specific methyltransferase [Oceanobacillus iheyensis HTE831] gi|50897489|sp|Q8EL95|MT36_OCEIH RecName: Full=Putative modification methylase OB3336; AltName: Full=Cytosine-specific methyltransferase; AltName: Full=M.OihORF3336P gi|22779025|dbj|BAC15292.1| cytosine-specific methyltransferase [Oceanobacillus iheyensis HTE831] Length = 460 Score = 70.6 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 16/92 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS--VKTYQANFP----NTLIFGDIA 57 + DLF G GG+ L + E++ + V ++ ++ + + DI Sbjct: 17 VVDLFSGCGGLALGFQLA----GFNIRKGIELDRDASDVASFNLHWRQGKHDRHLNNDIT 72 Query: 58 KIKTQDI-PDHD-----VLLAGFPCQPFSQAG 83 + + D D +++ G PCQ +S+ G Sbjct: 73 LLSANEFYNDLDRKNDLIVIGGPPCQAYSKIG 104 >gi|268602423|ref|ZP_06136590.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae PID18] gi|268586554|gb|EEZ51230.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae PID18] Length = 315 Score = 70.2 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 11/75 (14%) Query: 16 LDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDIPDH------D 68 + EQ + S E+ +TY+ NFP + L+ D+ + QD+ + D Sbjct: 1 MGFEQA----GFQQLLSVEMESDYCQTYRTNFPRHQLLQKDLTTLTEQDLTNCLNGQSVD 56 Query: 69 VLLAGFPCQPFSQAG 83 +++ G PCQ FS AG Sbjct: 57 LVIGGPPCQGFSMAG 71 >gi|16125285|ref|NP_419849.1| C-5 cytosine-specific DNA methylase [Caulobacter crescentus CB15] gi|221234022|ref|YP_002516458.1| DNA-cytosine methyltransferase [Caulobacter crescentus NA1000] gi|13422327|gb|AAK23017.1| C-5 cytosine-specific DNA methylase [Caulobacter crescentus CB15] gi|220963194|gb|ACL94550.1| DNA-cytosine methyltransferase [Caulobacter crescentus NA1000] Length = 335 Score = 70.2 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 13/90 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59 + + LFCG GG+ E+ E + + SVK+Y N P+ + D+++I Sbjct: 1 MVLLSLFCGAGGLDQGFEEA----GFEVGLALDRKLDSVKSYNLNRPSAAVARVKDLSEI 56 Query: 60 KTQDIPDH-------DVLLAGFPCQPFSQA 82 QDI D ++ G PCQ FSQA Sbjct: 57 TIQDIDDLYGKEFSPSGVIGGPPCQSFSQA 86 >gi|168207191|ref|ZP_02633196.1| modification methylase ScrFIB [Clostridium perfringens E str. JGS1987] gi|170661387|gb|EDT14070.1| modification methylase ScrFIB [Clostridium perfringens E str. JGS1987] Length = 310 Score = 70.2 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+KI +LF GIG R L V+ EI+ +V++Y F L + + + Sbjct: 1 MIKILELFGGIGSPRKALVNLG--VPVKAIDYVEIDKKAVRSYNEMFKKDLKYKTQSVVG 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 P D+L+ G PCQ FS AG Sbjct: 59 YNLKP--DILIHGSPCQSFSIAG 79 >gi|308275289|emb|CBX31885.1| hypothetical protein N47_O13040 [uncultured Desulfobacterium sp.] Length = 423 Score = 70.2 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 37/127 (29%), Gaps = 49/127 (38%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ----ANF---------P 48 ++ DLF G GG+ + E + + T + ++ Sbjct: 9 IRFLDLFAGAGGLSEGFIRA----GFTPVAHVEADKAACFTLKTRAAYHWLKNSGRLDRY 64 Query: 49 NTLIFGDIA-------------------KIKTQDI-------------PDHDVLLAGFPC 76 N + G I +I+ + D+++ G PC Sbjct: 65 NAYLHGSITRGELYELVPKKQILSVINSEIREDSLAEIFGEIDILLRGEKVDLIIGGPPC 124 Query: 77 QPFSQAG 83 Q +S AG Sbjct: 125 QAYSLAG 131 >gi|109946897|ref|YP_664125.1| site-specific DNA-methyltransferase [Helicobacter acinonychis str. Sheeba] gi|109714118|emb|CAJ99126.1| site-specific DNA-methyltransferase [Helicobacter acinonychis str. Sheeba] Length = 418 Score = 70.2 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 + + F G GG L Q + + + ++I+ ++KT N + I Sbjct: 3 YNVCEFFVGAGGSHLGFIQ----QGFKTLYVNDIDKDALKTLLHNNKELKDAIIDQTSIT 58 Query: 58 KIKTQDI-----PDHDVLLAGFPCQPFSQAG 83 +I + + + DV+ AG C+ FS AG Sbjct: 59 EIDPKKLQTQIKQEIDVIFAGIVCKSFSLAG 89 >gi|149919032|ref|ZP_01907517.1| DNA-cytosine methyltransferase family protein [Plesiocystis pacifica SIR-1] gi|149820185|gb|EDM79604.1| DNA-cytosine methyltransferase family protein [Plesiocystis pacifica SIR-1] Length = 401 Score = 70.2 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 14/88 (15%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKIKTQ 62 LF G GG+ L LE+ + E + T +AN P+ + GDI ++ Sbjct: 9 ISLFTGAGGLDLGLEKA----GFQVRLCVEKDTACRSTLRANRPDWPLSTPGDIHLGESS 64 Query: 63 DI--------PDHDVLLAGFPCQPFSQA 82 + ++ G PCQP+S+A Sbjct: 65 SLMAQAGVQRRQLSLVSGGPPCQPWSKA 92 >gi|126459191|ref|YP_001055469.1| DNA-cytosine methyltransferase [Pyrobaculum calidifontis JCM 11548] gi|126248912|gb|ABO08003.1| DNA-cytosine methyltransferase [Pyrobaculum calidifontis JCM 11548] Length = 313 Score = 70.2 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 25 RNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDIP---DHDVLLAGFPCQPFS 80 + EI+ + +TY N P+ ++ DI + +D+ DV++ PC+PF+ Sbjct: 20 AGFRILTAVEIDRDAARTYSFNHPDVVVLQEDIRDVDYKDLEAWGKVDVVIGSPPCEPFT 79 Query: 81 QA 82 A Sbjct: 80 AA 81 >gi|73853882|ref|NP_001027526.1| DNA (cytosine-5)-methyltransferase 1 [Sus scrofa] gi|66363554|gb|AAY45793.1| DNA methyltransferase 1 [Sus scrofa] Length = 1610 Score = 70.2 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P + +F Sbjct: 1135 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAHA-FRLNNPGSTVFTEDCNVL 1190 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ + Q +P D ++L G PCQ FS Sbjct: 1191 LKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 1226 >gi|315268237|gb|ADT95090.1| DNA-cytosine methyltransferase [Shewanella baltica OS678] Length = 350 Score = 70.2 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLFCG GG+ L++ ++ +I P Y+ N I +A++ Sbjct: 3 IRAIDLFCGAGGLTHGLQRA----GIDVIAGYDIEPQCRYAYEKNNKAVFIQESVAELTE 58 Query: 62 QDIP----DHD--VLLAGFPCQPFS 80 + D D V+ PCQPFS Sbjct: 59 DEFSHYYGDADIRVMAGCAPCQPFS 83 >gi|217976734|ref|YP_002360881.1| DNA-cytosine methyltransferase [Methylocella silvestris BL2] gi|217502110|gb|ACK49519.1| DNA-cytosine methyltransferase [Methylocella silvestris BL2] Length = 383 Score = 70.2 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 8/83 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKI 59 M + F G G R L N C F+++ + +Y+AN+ L D+ + Sbjct: 1 MPDFLEFFAGGGMARAGL-----GPNWTCRFANDFDARKCASYRANWGAGELFEADVGAL 55 Query: 60 KTQDI--PDHDVLLAGFPCQPFS 80 + DI P ++ A FPCQ S Sbjct: 56 QPADIKTPRANLAWASFPCQDLS 78 >gi|238018550|ref|ZP_04598976.1| hypothetical protein VEIDISOL_00377 [Veillonella dispar ATCC 17748] gi|237865021|gb|EEP66311.1| hypothetical protein VEIDISOL_00377 [Veillonella dispar ATCC 17748] Length = 452 Score = 70.2 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 14/93 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT---YQ---ANFPN-TLIFG 54 +KI +F G+GG + LE + + +S++ P S KT Y+ FP+ I Sbjct: 23 MKIFSMFDGVGGFIVGLENSSKEV-FQTLYSNQYEP-SRKTQDAYEVGLYRFPDMEHIPT 80 Query: 55 DIAKIKTQDIPD-----HDVLLAGFPCQPFSQA 82 D+A I + + D+++ GFPCQ +S A Sbjct: 81 DVALIPNEKFGEMKSNGVDMIVGGFPCQDYSVA 113 >gi|30263689|ref|NP_846066.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. Ames] gi|47529099|ref|YP_020448.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49186533|ref|YP_029785.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. Sterne] gi|65321007|ref|ZP_00393966.1| COG0270: Site-specific DNA methylase [Bacillus anthracis str. A2012] gi|165872817|ref|ZP_02217444.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0488] gi|167636020|ref|ZP_02394326.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0442] gi|167639742|ref|ZP_02398011.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0193] gi|170689288|ref|ZP_02880483.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0465] gi|170706823|ref|ZP_02897281.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0389] gi|177652017|ref|ZP_02934563.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0174] gi|190569254|ref|ZP_03022149.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis Tsiankovskii-I] gi|227813418|ref|YP_002813427.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. CDC 684] gi|229604763|ref|YP_002867927.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0248] gi|254683612|ref|ZP_05147472.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. CNEVA-9066] gi|254721107|ref|ZP_05182898.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A1055] gi|254735716|ref|ZP_05193422.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. Western North America USA6153] gi|254739585|ref|ZP_05197280.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. Kruger B] gi|254751154|ref|ZP_05203193.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. Vollum] gi|254759471|ref|ZP_05211496.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. Australia 94] gi|30258324|gb|AAP27552.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. Ames] gi|47504247|gb|AAT32923.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49180460|gb|AAT55836.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. Sterne] gi|164711495|gb|EDR17045.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0488] gi|167512143|gb|EDR87520.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0193] gi|167528532|gb|EDR91294.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0442] gi|170128241|gb|EDS97110.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0389] gi|170666746|gb|EDT17514.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0465] gi|172082386|gb|EDT67451.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0174] gi|190559628|gb|EDV13618.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis Tsiankovskii-I] gi|227006861|gb|ACP16604.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. CDC 684] gi|229269171|gb|ACQ50808.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family protein [Bacillus anthracis str. A0248] Length = 259 Score = 70.2 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 11/89 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ DL GI GI + + ++ EI ++ K + N+PN IF D+ K+ Sbjct: 9 LKMLDLCSGIAGISMAADWA----GIDTAAFCEIEEFNQKVLRKNYPNIPIFPDLYKLMK 64 Query: 62 QDIPD--HD-----VLLAGFPCQPFSQAG 83 Q + D D V+ AG+PCQ S G Sbjct: 65 QSLIDGGVDVDSIGVISAGYPCQGESLVG 93 >gi|227539355|ref|ZP_03969404.1| possible DNA (cytosine-5-)-methyltransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227240668|gb|EEI90683.1| possible DNA (cytosine-5-)-methyltransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 386 Score = 70.2 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 40/101 (39%), Gaps = 25/101 (24%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YS------VKTYQANFPN-----TL 51 + + G G + + E+ E +++E + ++ + +++ + N Sbjct: 11 VLSFYSGGGFMDMGFEKA----GFEIVWTNEFDKVFAKLHAAGITSWRKSRGNGIKAEIF 66 Query: 52 IFGDIAKIKTQDI---------PDHDVLLAGFPCQPFSQAG 83 I +K+ +I P+H ++ G PCQ FS G Sbjct: 67 NTKSITDVKSNEIIEEAFPNGKPEHFGIIGGPPCQDFSMNG 107 >gi|111185554|gb|AAI19484.1| Dnmt1 protein [Mus musculus] Length = 197 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 36 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 91 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 92 LKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 127 >gi|308071385|ref|YP_003872990.1| Modification methylase AquI alpha subunit (cytosine-specific methyltransferase AquI alpha subunit) [Paenibacillus polymyxa E681] gi|305860664|gb|ADM72452.1| Modification methylase AquI alpha subunit (Cytosine-specific methyltransferase AquI alpha subunit) [Paenibacillus polymyxa E681] Length = 366 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 14/93 (15%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKI 59 M + F G GG+ + L Q + E+ P +T N + G+I Sbjct: 1 MKNVISFFTGAGGLDIGLNQA----GFTVKLAVELMPIYCETLSLNHAGLNIRQGNIMDY 56 Query: 60 KTQDI---------PDHDVLLAGFPCQPFSQAG 83 + + + ++++ G PCQ FS AG Sbjct: 57 SREKVYTEAGLEENEEVELMVGGSPCQSFSTAG 89 >gi|207091855|ref|ZP_03239642.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori HPKX_438_AG0C1] Length = 109 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPNTL-IFGDI- 56 KI DLFCG GG LE ++C + ++ T++ N N + ++GDI Sbjct: 3 YKILDLFCGAGGFSAGLECLKEFDALIGLDC------DKQALITFENNHKNAIGVYGDIT 56 Query: 57 -AKIKTQDIP-----DHDVLLAGFPCQPFSQAG 83 +IK + I + ++++ G PCQ FS G Sbjct: 57 QTEIKEKVIKLAQKLEINMIIGGPPCQGFSNKG 89 >gi|315169253|gb|EFU13270.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX1341] Length = 521 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 34/103 (33%), Gaps = 28/103 (27%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLIFGD 55 DLFCG GG + Q FSS+ +P +TY D Sbjct: 5 IDLFCGAGGFSEGIIQA----GFNIVFSSDKSPMVEETYTNRHKQLGLVEGVDTHFELAD 60 Query: 56 IAKIKTQDI---------------PDHDVLLAGFPCQPFSQAG 83 I + T+ I D + G PCQ FS+ G Sbjct: 61 IKDLTTELIFKSINNLKYGNIFEPGSIDAIFGGPPCQGFSRLG 103 >gi|73986989|ref|XP_533919.2| PREDICTED: similar to DNA (cytosine-5)-methyltransferase 1 (Dnmt1) (DNA methyltransferase HsaI) (DNA MTase HsaI) (MCMT) (M.HsaI) [Canis familiaris] Length = 1645 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P + +F Sbjct: 1170 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNVL 1225 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1226 LKLVMAGEATNSRGQKLPQKGDVEMLCGGPPCQGFS 1261 >gi|331090154|ref|ZP_08339042.1| hypothetical protein HMPREF1025_02625 [Lachnospiraceae bacterium 3_1_46FAA] gi|330402100|gb|EGG81672.1| hypothetical protein HMPREF1025_02625 [Lachnospiraceae bacterium 3_1_46FAA] Length = 428 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 35/130 (26%), Gaps = 52/130 (40%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT------------------Y 43 DLF G GG+ Q + E+N ++ KT Y Sbjct: 10 YNFIDLFAGAGGLSEGFLQA----GFKPVAHVEMNEFAAKTLETRSAYYYLKGTDNLALY 65 Query: 44 QANFPNTLIFGD--------IAKIKTQD----------------------IPDHDVLLAG 73 + + D I K + I DV++ G Sbjct: 66 KKYVSGKISRDDFMKQIPASITKTIINETMSDETLPAIFKTIDGIMKIRGINKIDVIVGG 125 Query: 74 FPCQPFSQAG 83 PCQ +S G Sbjct: 126 PPCQAYSLVG 135 >gi|226228975|ref|YP_002763081.1| putative DNA methyltransferase [Gemmatimonas aurantiaca T-27] gi|226092166|dbj|BAH40611.1| putative DNA methyltransferase [Gemmatimonas aurantiaca T-27] Length = 407 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 26/100 (26%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++ DLF G G + L + + + + N +++ Y+ NFPN I+K Sbjct: 64 RVVDLFSGCGAMSLGIWEASRAIGARMVPVMALDFNDKALRVYEDNFPNVWA---ISK-P 119 Query: 61 TQDIPD--------------------HDVLLAGFPCQPFS 80 + I D DVL+ G PCQ S Sbjct: 120 VESILDGALGAPASPAERDLVARLGHVDVLIGGPPCQGHS 159 >gi|188991808|ref|YP_001903818.1| hypothetical protein xccb100_2413 [Xanthomonas campestris pv. campestris str. B100] gi|167733568|emb|CAP51773.1| hypothetical protein predicted by Glimmer/Critica [Xanthomonas campestris pv. campestris] Length = 271 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----KIKTQD 63 GI + + +E + +EI P+ ++P+ GD+ ++ Sbjct: 15 CSGI----EAVSLAWQPLGIEAAWFAEIEPFPSAVLAHHYPHVPNLGDMTMIARQVHAGT 70 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+L+ G PCQ FS AG Sbjct: 71 VPAPDILVGGTPCQSFSVAG 90 >gi|20068989|gb|AAM09642.1|AF458983_2 m6 adenine and m5 cytosine DNA methyltransferase [Hafnia alvei] Length = 1061 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 27/102 (26%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-----NTLIFG--DIA 57 D+FCG GG+ L LE + + N ++ TY N P + G + Sbjct: 812 VDVFCGAGGLSLGLESA----GWNIVAAIDNNSDALDTYCFNRPCDLEPDNAQEGRTAVF 867 Query: 58 KIKTQDIPDH----------------DVLLAGFPCQPFSQAG 83 K Q+ + D+L+ G PCQ FS AG Sbjct: 868 KRDLQERREFEDVVTRIETGLGSTKLDLLVGGPPCQGFSHAG 909 >gi|293417389|ref|ZP_06660013.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185] gi|291430909|gb|EFF03905.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185] Length = 345 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 10/85 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ DLFCG GG+ L+Q ++ +I Y++N I DI+ + Sbjct: 4 KVVDLFCGAGGLTHGLKQA----GLDVVAGIDIESACRVAYESNNSALFIEKDISLVTKD 59 Query: 63 DIPD------HDVLLAGFPCQPFSQ 81 ++ D VL PCQPFS+ Sbjct: 60 ELNDLFEGAQVRVLAGCAPCQPFSR 84 >gi|29366785|ref|NP_813725.1| gp9.1 [Streptomyces phage phiBT1] gi|29243105|emb|CAD80133.1| gp9.1 [Streptomyces phage phiBT1] Length = 166 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 4/83 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + I +L G GG+ + +E + +E++ + + + FP+ GD+ + Sbjct: 1 MAILELCAGYGGLGIAVEAL---TGDKVTVVAEVHKAACEVMKYRFPDAPNIGDVRHARW 57 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 +D+ + D + AGFPCQ S AG Sbjct: 58 EDLRGEVDTITAGFPCQDISNAG 80 >gi|329938281|ref|ZP_08287732.1| DNA-cytosine methyltransferase [Streptomyces griseoaurantiacus M045] gi|329302770|gb|EGG46660.1| DNA-cytosine methyltransferase [Streptomyces griseoaurantiacus M045] Length = 367 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 I L G GG+ + + +E +P++ + P GDI + Sbjct: 16 TILALCAGYGGLEAAIRA---RIGGQVAAYAENDPHAATVFAHRHPGVPNLGDIRAVDWD 72 Query: 63 DIPDH---DVLLAGFPCQPFSQAG 83 + D DV+ AGFPC+ S AG Sbjct: 73 RVRDVFRPDVIGAGFPCRNTSNAG 96 >gi|317179735|dbj|BAJ57523.1| Type II DNA modification enzyme [Helicobacter pylori F30] Length = 418 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 I + F G GG L Q + + + ++I+ ++KT N + I Sbjct: 3 YNICEFFVGAGGSHLGFIQ----QGFKTLYVNDIDKDALKTLLHNNKELKDAIIDQTSIT 58 Query: 58 KIKTQDI-----PDHDVLLAGFPCQPFSQAG 83 +I + + + DV+ AG C+ FS AG Sbjct: 59 EIDPKKLQTQIKQEVDVIFAGIVCKSFSLAG 89 >gi|308062818|gb|ADO04706.1| site-specific DNA-methyltransferase [Helicobacter pylori Cuz20] Length = 418 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 I + F G GG L Q + + + ++I+ ++KT N + I Sbjct: 3 YNICEFFVGAGGSHLGFIQ----QGFKTLYVNDIDKDALKTLLHNNKELKDAIIDQTSIT 58 Query: 58 KIKTQDI-----PDHDVLLAGFPCQPFSQAG 83 +I + + + DV+ AG C+ FS AG Sbjct: 59 EIDPKKLQTQIKQEVDVIFAGIVCKSFSLAG 89 >gi|298504342|gb|ADI83065.1| DNA methyltransferase, putative [Geobacter sulfurreducens KN400] Length = 305 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 7/85 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 ++ +LFCGIGG +E T V + + + ++ TY+ NFP D+ ++ Sbjct: 1 MRAVELFCGIGGFAAAVEGT----GVHVVAALDQDDAALATYRLNFPGHGARKVDLERVS 56 Query: 61 TQDI--PDHDVLLAGFPCQPFSQAG 83 ++ D+ PCQP+ + G Sbjct: 57 AWELTAGGVDLWWLSPPCQPYCERG 81 >gi|310791056|gb|EFQ26585.1| C-5 cytosine-specific DNA methylase [Glomerella graminicola M1.001] Length = 750 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 14/88 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 + D FCG GG E+ H ++ + + TY+ NFPNT +F + Sbjct: 318 YTVFDSFCGAGGFSRGAERAGLH----VRYAVDNCEKACATYRLNFPNTNLFE--TSVDE 371 Query: 61 ------TQDIPDHDVLLAGFPCQPFSQA 82 ++ D+L PCQ +S A Sbjct: 372 LMRSQKETELRT-DILHLSPPCQTWSPA 398 >gi|315053597|ref|XP_003176173.1| modification methylase HphIA [Arthroderma gypseum CBS 118893] gi|311338019|gb|EFQ97221.1| modification methylase HphIA [Arthroderma gypseum CBS 118893] Length = 581 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 D FCG GG+ +Q + ++ + +P ++ +Y+ANFP++L D+A Sbjct: 276 YTFGDGFCGAGGVSRGAQQA----GLRLSWAFDHSPSAMNSYRANFPSSLAETSDVADFL 331 Query: 61 TQ---DIPDHDVLLAGFPCQPFSQA 82 T DI DVL PCQPFS A Sbjct: 332 TNRSLDI-RIDVLHLSPPCQPFSPA 355 >gi|289423000|ref|ZP_06424820.1| modification methylase ScrFIB [Peptostreptococcus anaerobius 653-L] gi|289156574|gb|EFD05219.1| modification methylase ScrFIB [Peptostreptococcus anaerobius 653-L] Length = 329 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI +LF GIG IR + + EI+ VK+Y A + I Sbjct: 18 IKIIELFGGIGAIRKAFIR--QKIPHQVIDYVEIDKNCVKSYNALYNTNFKPKSILYFHP 75 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D D+L+ G PCQ FS++G Sbjct: 76 PD-EKIDLLMHGSPCQDFSRSG 96 >gi|302134308|ref|ZP_07260298.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 584 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L+ + GI ++ +E + +EI P+ ++P T GD+ K Sbjct: 10 LQYGSVCSGI----EAATAAWHPLGMEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGA 65 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 + I DVL+ G PCQ FS AG Sbjct: 66 LVLAGKIDAPDVLVGGTPCQAFSVAG 91 >gi|214010196|ref|NP_445806.3| DNA (cytosine-5)-methyltransferase 1 [Rattus norvegicus] gi|149020535|gb|EDL78340.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_b [Rattus norvegicus] Length = 1621 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F Sbjct: 1143 LRTLDVFSGCGGLTEGFHQAGIS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1199 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1200 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1234 >gi|149020534|gb|EDL78339.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Rattus norvegicus] Length = 1503 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F Sbjct: 1025 LRTLDVFSGCGGLTEGFHQAGIS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1081 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1082 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1116 >gi|149020536|gb|EDL78341.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_c [Rattus norvegicus] Length = 1634 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F Sbjct: 1156 LRTLDVFSGCGGLTEGFHQAGIS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1212 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1213 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1247 >gi|20137608|sp|Q9Z330|DNMT1_RAT RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1; AltName: Full=DNA MTase RnoIP; Short=M.RnoIP; AltName: Full=DNA methyltransferase I; AltName: Full=MCMT Length = 1622 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F Sbjct: 1144 LRTLDVFSGCGGLTEGFHQAGIS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1200 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1201 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1235 >gi|4160670|dbj|BAA37118.1| DNA cytosine 5 methyltransferase [Rattus rattus] Length = 1622 Score = 69.8 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F Sbjct: 1144 LRTLDVFSGCGGLTEGFHQAGIS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1200 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ Q +P D ++L G PCQ FS Sbjct: 1201 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1235 >gi|332674342|gb|AEE71159.1| site-specific DNA-methyltransferase [Helicobacter pylori 83] Length = 418 Score = 69.4 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 I + F G GG L Q + + + ++I+ ++KT N + I Sbjct: 3 YNICEFFVGAGGSHLGFIQ----QGFKTLYVNDIDKDALKTLLHNNKELKDAIIDQTSIT 58 Query: 58 KIKTQDI-----PDHDVLLAGFPCQPFSQAG 83 +I + + + DV+ AG C+ FS AG Sbjct: 59 EIDPKKLQTQIKQEVDVIFAGIVCKSFSLAG 89 >gi|301772046|ref|XP_002921451.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1-like [Ailuropoda melanoleuca] Length = 1676 Score = 69.4 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P + +F Sbjct: 1199 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNVL 1254 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1255 LKLVMAGEATNPRGQKLPQKGDVEMLCGGPPCQGFS 1290 >gi|281337410|gb|EFB12994.1| hypothetical protein PANDA_010327 [Ailuropoda melanoleuca] Length = 1576 Score = 69.4 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P + +F Sbjct: 1099 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNVL 1154 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1155 LKLVMAGEATNPRGQKLPQKGDVEMLCGGPPCQGFS 1190 >gi|228471277|ref|ZP_04056083.1| modification methylase HgiDII [Porphyromonas uenonis 60-3] gi|228306919|gb|EEK16017.1| modification methylase HgiDII [Porphyromonas uenonis 60-3] Length = 351 Score = 69.4 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 10/83 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLFCGIGG+ L + ++ +++ Y+ N I+ DI + ++ Sbjct: 5 VVDLFCGIGGLSYGLREA----GLQILAGYDLDQTCAFAYERNNNAQFIYKDIRLVSGKE 60 Query: 64 IP------DHDVLLAGFPCQPFS 80 + D VL PCQPFS Sbjct: 61 VSTLLAETDVKVLAGCAPCQPFS 83 >gi|45357574|ref|NP_987131.1| DNA-cytosine methyltransferase [Methanococcus maripaludis S2] gi|45047134|emb|CAF29567.1| C-5 cytosine-specific DNA methylase [Methanococcus maripaludis S2] Length = 355 Score = 69.4 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 55/132 (41%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------- 50 + DLFCG GG + + + E++ + +Y N+ T Sbjct: 1 MNFIDLFCGCGGFSRGFVE----MGFKPLLAIELDENAANSYALNYNGTVFEKKLNDILE 56 Query: 51 -------------------------------LIFGDIAKIKTQDI---------PDHDVL 70 +I DI +I ++ I DV+ Sbjct: 57 KDVYFKLEDFLVQDDIEEFKKSNNYENLNPVVINEDIREINSKYITNKIKDTSYSKIDVI 116 Query: 71 LAGFPCQPFSQA 82 + G PC+ ++ A Sbjct: 117 IGGPPCEGYTGA 128 >gi|261838825|gb|ACX98591.1| cytosine-methyltransferase [Helicobacter pylori 51] Length = 413 Score = 69.4 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 I + F G GG L Q + + + ++I+ ++KT N + I Sbjct: 3 YNICEFFVGAGGSHLGFIQ----QGFKTLYVNDIDKDALKTLLHNNKELKDAIIDQTSIT 58 Query: 58 KIKTQDI-----PDHDVLLAGFPCQPFSQAG 83 +I + + + DV+ AG C+ FS AG Sbjct: 59 EIDPKKLQTQIKQEVDVIFAGIVCKSFSLAG 89 >gi|254932546|ref|ZP_05265905.1| cytosine methyl transferase [Listeria monocytogenes HPB2262] gi|293584103|gb|EFF96135.1| cytosine methyl transferase [Listeria monocytogenes HPB2262] gi|332310737|gb|EGJ23832.1| DNA (Cytosine-5-)-methyltransferase [Listeria monocytogenes str. Scott A] Length = 351 Score = 69.4 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 11/87 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++ DLFCG+GG+ +++T + +I +Y+ N I DI +I Sbjct: 2 IVNAVDLFCGVGGLTCGVQKT----GINVIAGYDIAKECQYSYEYNNKARFIHKDIKEIS 57 Query: 61 TQDI-----PDHDV--LLAGFPCQPFS 80 +I + D+ L+ PCQPFS Sbjct: 58 DDEISALYPENTDIRLLMGCAPCQPFS 84 >gi|12275200|emb|CAC22275.1| cytosine methyl transferase [Listeria monocytogenes] Length = 352 Score = 69.4 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 11/87 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++ DLFCG+GG+ +++T + +I +Y+ N I DI +I Sbjct: 2 IVNAVDLFCGVGGLTCGVQKT----GINVIAGYDIAKECQYSYEYNNKARFIHKDIKEIS 57 Query: 61 TQDI-----PDHDV--LLAGFPCQPFS 80 +I + D+ L+ PCQPFS Sbjct: 58 DDEISALYPENTDIRLLMGCAPCQPFS 84 >gi|29566171|ref|NP_817742.1| gp65 [Mycobacterium phage Che9c] gi|29424896|gb|AAN12623.1| gp65 [Mycobacterium phage Che9c] Length = 513 Score = 69.4 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPN-TLIFGDIAK 58 ML +TDLFCG GG VE S+ + +V+T+ N P+ + D+++ Sbjct: 1 MLTLTDLFCGAGGSSTG---AIEIPGVEVRVASNHWD-LAVETHNTNHPDADHVCADLSQ 56 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQA 82 I + P D+L A C S A Sbjct: 57 IDPRRFPRTDILWASPECTNHSVA 80 >gi|86141746|ref|ZP_01060270.1| DNA-cytosine methyltransferase [Leeuwenhoekiella blandensis MED217] gi|85831309|gb|EAQ49765.1| DNA-cytosine methyltransferase [Leeuwenhoekiella blandensis MED217] Length = 410 Score = 69.4 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 36/128 (28%), Gaps = 50/128 (39%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT------------------- 42 L DLF G GG+ E EI+ + +T Sbjct: 4 LNFIDLFSGAGGLSEGFINA----GFEPIAHVEIDAKACETLETRLIYHKLKSEDKLKDY 59 Query: 43 YQANFP---------------------NTLIFGDIAKIKTQDI------PDHDVLLAGFP 75 Y+ NT I GD K+ I D+++ G P Sbjct: 60 YKYILGDISRSDFLEKNSSSTISNSVINTAIGGDNNKVIFAKIDNLVKGKPVDLIVGGPP 119 Query: 76 CQPFSQAG 83 CQ +S G Sbjct: 120 CQAYSLVG 127 >gi|158339590|ref|YP_001520979.1| C-5 cytosine-specific DNA methylase [Acaryochloris marina MBIC11017] gi|158309831|gb|ABW31447.1| C-5 cytosine-specific DNA methylase [Acaryochloris marina MBIC11017] Length = 277 Score = 69.4 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 37/137 (27%), Gaps = 62/137 (45%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---------------- 48 DLFCG GG L + + + + E + + TY AN Sbjct: 40 IDLFCGCGGFSLGMIEG----GFQVVAAVEKDANAALTYLANLGAYPLDMNFVVDEDEAR 95 Query: 49 ----------------------------------NTLIFGDIAKIKTQDIPD-------- 66 GD+ ++ Q I D Sbjct: 96 FTKLLEKIMQMDKDGGIAQCFLSGQHRPPERPGVEHFWLGDVRQLTGQQILDSIGVGVGE 155 Query: 67 HDVLLAGFPCQPFSQAG 83 D + G PCQ FS AG Sbjct: 156 VDCVFGGPPCQGFSIAG 172 >gi|255548992|ref|XP_002515552.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis] gi|223545496|gb|EEF47001.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis] Length = 404 Score = 69.4 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 4/83 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 +I + + GIGG+R L + N + + +IN + Y+ NF + G+I + Sbjct: 14 RILEFYSGIGGMRYSLMKAG--VNAKVMEAFDINNIANDAYEHNFGHRPYQGNIQSLTAA 71 Query: 63 DIPD--HDVLLAGFPCQPFSQAG 83 D+ L PCQP+++ G Sbjct: 72 DLDSYAAHAWLLSPPCQPYTRQG 94 >gi|329955696|ref|ZP_08296604.1| DNA (cytosine-5-)-methyltransferase [Bacteroides clarus YIT 12056] gi|328526099|gb|EGF53123.1| DNA (cytosine-5-)-methyltransferase [Bacteroides clarus YIT 12056] Length = 465 Score = 69.4 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 38/120 (31%) Query: 2 LKITDLFCGIGGIRLDLEQTF-------------------------NHRNVECFFSSEIN 36 LKI LF G GG+ L E +F N F+++I Sbjct: 54 LKILSLFSGCGGMDLGFEGSFIAPYKSIAPHPEWIEKHINEDWVSVKPTNFSLVFANDIL 113 Query: 37 PYSVKT---YQANF---PNTLIFGDIAKIKTQD------IPD-HDVLLAGFPCQPFSQAG 83 + T + + P+ + + Q P+ DV++ GFPCQ FS +G Sbjct: 114 KEASLTWTRFMKRYGYDPSIYRTESVVDLVKQHKKGVKIFPENVDVVVGGFPCQDFSVSG 173 >gi|37524602|ref|NP_927946.1| hypothetical protein plu0600 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784026|emb|CAE12895.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 379 Score = 69.4 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 5/80 (6%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQD 63 + F GIG R LE ++ ++++ + Y+ + N L+ D+ + D Sbjct: 15 LEFFAGIGLARAGLELA----GIKTLWANDYDINKKAMYEGQWGGNELLLADVHSLCGDD 70 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P DV + PC S AG Sbjct: 71 LPTVDVAWSSSPCTDLSLAG 90 >gi|255322450|ref|ZP_05363595.1| modification methylase HgiDII [Campylobacter showae RM3277] gi|255300358|gb|EET79630.1| modification methylase HgiDII [Campylobacter showae RM3277] Length = 351 Score = 69.4 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 14/90 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 K D FCG GG+ L Q + + + + +TY+ N ++ I DI K+K Sbjct: 4 YKAIDFFCGGGGMTCGLRQA----GIYVVAGIDFDKDAKETYEYNNKGSVFIHSDIRKLK 59 Query: 61 TQ------DIPDHD---VLLAGFPCQPFSQ 81 I +D + PCQ +S Sbjct: 60 IDYFEQNFHINRNDDNLIFAGCSPCQFYSI 89 >gi|168467807|ref|ZP_02701644.1| Dmt [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195629099|gb|EDX48473.1| Dmt [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 819 Score = 69.4 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L + GI + + + SEI P+ +P GD+ K Sbjct: 4 LSYGSVCSGI----EAASIAWEPLGMRPAWFSEIEPFPCAVLAERWPEVPNLGDMTKIAA 59 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 I ++ D+L+ G PCQ FS AG Sbjct: 60 SIAANEVAAPDLLVGGTPCQAFSIAG 85 >gi|332995746|gb|AEF05801.1| DNA-cytosine methyltransferase [Alteromonas sp. SN2] Length = 369 Score = 69.4 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPD-HDVLLAGFP 75 + + +C F+++ + V TY+ N+ N T++ DI ++ D+ D++ A FP Sbjct: 1 MARAGLDSGWKCLFANDFDYKKVNTYKKNWGNETIVQSDIKTLQCSDLKGAADLVWASFP 60 Query: 76 CQPFS 80 CQ S Sbjct: 61 CQDLS 65 >gi|254416815|ref|ZP_05030564.1| DNA-cytosine methyltransferase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196176361|gb|EDX71376.1| DNA-cytosine methyltransferase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 391 Score = 69.4 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 23/98 (23%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAKIKT 61 LF G G+ L LE E + SVKT N P + I I I T Sbjct: 9 ISLFSGAFGLDLGLELA----GFHTVSVVEKDRDSVKTIALNRPYLHESAIPRAIETIST 64 Query: 62 QDI----------------PDHDVLLAGFPCQPFSQAG 83 QD+ + D+++ G PCQPFS AG Sbjct: 65 QDLLLEGGRVLGKGRALRPNEVDLVVGGAPCQPFSTAG 102 >gi|75812610|ref|YP_320229.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] gi|75705366|gb|ABA25040.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] Length = 253 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Query: 1 MLKITDLFCGIGGI-RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 M + LF GIGG+ + + EI+PYS + P T I DI Sbjct: 1 MKSVLSLFSGIGGLCHHGIAAAGLSHKFQVRQFVEISPYSQSVLRYEQPQTPIHSDITTY 60 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 D+L GFPC S +G Sbjct: 61 HCN-RGQFDILCGGFPCAGTSNSG 83 >gi|68536951|ref|YP_251655.1| putative DNA restriction-modification system, DNA methylase [Corynebacterium jeikeium K411] gi|68264550|emb|CAI38038.1| putative DNA restriction-modification system, DNA methylase [Corynebacterium jeikeium K411] Length = 341 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L ++ G GG L LE E++ ++V T +AN P ++ GD+ Sbjct: 5 LTSVEICAGAGGQALGLEAA----GFIHRAVVELDGHAVSTLRANRPAWNIVHGDVLDFD 60 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 D D+L G PC PFS AG Sbjct: 61 ISPFADDLDLLAGGVPCPPFSIAG 84 >gi|116871711|ref|YP_848492.1| cytosine methyl transferase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740589|emb|CAK19709.1| cytosine methyl transferase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 351 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 11/87 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++ DLFCG+GG+ +++T + +I +Y+ N I DI I Sbjct: 2 IVNAVDLFCGVGGLTCGVQKT----GINVIAGYDIAKECQYSYEYNNKARFIHKDIKDIS 57 Query: 61 TQDI-----PDHDV--LLAGFPCQPFS 80 +I + D+ L+ PCQPFS Sbjct: 58 DNEISALYPENTDIRLLMGCAPCQPFS 84 >gi|150024948|ref|YP_001295774.1| type II modification methyltransferase [Flavobacterium psychrophilum JIP02/86] gi|149771489|emb|CAL42958.1| Probable type II modification methyltransferase [Flavobacterium psychrophilum JIP02/86] Length = 425 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 40/123 (32%), Gaps = 42/123 (34%) Query: 3 KITDLFCGIGGIRLDLEQTFN--------------------------HRNVECFFSSEIN 36 + LF G GG+ + E F E F+++I+ Sbjct: 4 NLLSLFSGCGGMDIGFEGGFKIPKATINTDIHKDWIQKEDSTHYYLKETFFETKFANDIS 63 Query: 37 PYSVKTYQANF--------PNTLIFGDIAKI-------KTQDIPD-HDVLLAGFPCQPFS 80 ++ + F T G I I T P+ +++ GFPCQ FS Sbjct: 64 EHAKIAWNNYFSTKRGYDLNGTFKVGSIVDIVKEYKNGNTTVFPENVEIVTGGFPCQDFS 123 Query: 81 QAG 83 AG Sbjct: 124 VAG 126 >gi|46200907|ref|ZP_00207896.1| COG0270: Site-specific DNA methylase [Magnetospirillum magnetotacticum MS-1] Length = 561 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 21 TFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPF 79 + F +EI P+ ++P+ GD+ I Q DVL+ G PCQ F Sbjct: 40 AWEPLGWRPAFFAEIEPFPSAVLAHHYPHVPNLGDMTAIDGQAWRGKIDVLVGGTPCQAF 99 Query: 80 SQAG 83 S AG Sbjct: 100 SVAG 103 >gi|296163057|ref|ZP_06845831.1| C-5 cytosine-specific DNA methylase [Burkholderia sp. Ch1-1] gi|295886701|gb|EFG66545.1| C-5 cytosine-specific DNA methylase [Burkholderia sp. Ch1-1] Length = 304 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 ++ DLF G GG ++ P + + + N P T D+ + Sbjct: 1 MRAIDLFSGAGGFTEGAVMA----GCSVVWAGNHWPLACEYHARNHPETEHACQDLQQAD 56 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 + +P HD++LA CQ S A Sbjct: 57 WRTVPTHDLMLAAPACQGHSPA 78 >gi|284159927|ref|YP_001060514.2| BsaWI methylase [Burkholderia pseudomallei 668] gi|283775103|gb|ABN83996.2| BsaWI methylase [Burkholderia pseudomallei 668] Length = 440 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 28/103 (27%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNT---LIFG 54 DLF G GG+ L L ++ E F+ E + + +T N +PN + Sbjct: 6 IDLFAGCGGLSLGL----HYAGWEGLFAVERDAMAFETLYRNMIDGAAAYPNYAAWPAWL 61 Query: 55 DIAKIKTQDIPD--------------HDVLLAGFPCQPFSQAG 83 + I + D D+++ G PCQ FS G Sbjct: 62 EKTNIDLTKLLDNQQSRRQLRALSGTVDLIVGGPPCQGFSVGG 104 >gi|227540659|ref|ZP_03970708.1| possible DNA (cytosine-5-)-methyltransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227239483|gb|EEI89498.1| possible DNA (cytosine-5-)-methyltransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 386 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 40/101 (39%), Gaps = 25/101 (24%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YS------VKTYQANFPN-----TL 51 + + G G + + E+ E +++E + ++ + +++ + N Sbjct: 11 VLSFYSGGGFMDMGFEKA----GFEIVWTNEFDKVFAKLHAAGITSWRKSRGNGIKAEIF 66 Query: 52 IFGDIAKIKTQDI---------PDHDVLLAGFPCQPFSQAG 83 I +K+ +I P+H ++ G PCQ FS G Sbjct: 67 NTKSITDVKSNEIIKEAFPNGKPEHFGIIGGPPCQDFSMNG 107 >gi|115373224|ref|ZP_01460525.1| modification methylase NaeI [Stigmatella aurantiaca DW4/3-1] gi|115369825|gb|EAU68759.1| modification methylase NaeI [Stigmatella aurantiaca DW4/3-1] Length = 303 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 25 RNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 E + EI+ ++ T + N P + D+ D+L G PC PFS AG Sbjct: 2 AGFEHVAAVEIDKHACATLRLNRPQWRVFEEDLKDFSGSSFRGVDLLAGGVPCPPFSIAG 61 >gi|212693075|ref|ZP_03301203.1| hypothetical protein BACDOR_02582 [Bacteroides dorei DSM 17855] gi|212664361|gb|EEB24933.1| hypothetical protein BACDOR_02582 [Bacteroides dorei DSM 17855] Length = 436 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 38/130 (29%), Gaps = 52/130 (40%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT---------YQANFP---- 48 K DLF G GG+ + E E++ Y+ T +AN Sbjct: 7 YKFIDLFAGAGGLSEGFIRA----GFEPIAHIEMDHYACDTLKTRAAYHYLKANNKLSIY 62 Query: 49 -------------------------NTLIFGDIAKIKTQDI----------PDHDVLLAG 73 +T+I I K I D+++ G Sbjct: 63 EQYLRTKKEKTDGAWLWNQVPKEVIDTVIQEAIGKETIDGIFKKVDRLCKGQKVDIIIGG 122 Query: 74 FPCQPFSQAG 83 PCQ +S AG Sbjct: 123 PPCQAYSIAG 132 >gi|313886494|ref|ZP_07820210.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas asaccharolytica PR426713P-I] gi|312924040|gb|EFR34833.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas asaccharolytica PR426713P-I] Length = 351 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 10/83 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLFCGIGG+ L + ++ +++ Y+ N I+ DI + ++ Sbjct: 5 VVDLFCGIGGLSYGLREA----GLQILAGYDLDQTCAFAYERNNNAQFIYKDIRMVSGKE 60 Query: 64 IP------DHDVLLAGFPCQPFS 80 + D VL PCQPFS Sbjct: 61 VSTLLAETDVKVLAGCAPCQPFS 83 >gi|225849813|ref|YP_002730047.1| putative modification methylase FnuDI [Persephonella marina EX-H1] gi|225646519|gb|ACO04705.1| putative modification methylase FnuDI [Persephonella marina EX-H1] Length = 307 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 10/81 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DLFCG+GG L + E +IN + K ++ N I I +K Sbjct: 1 MKVLDLFCGMGGFSYGLSKA----GYEITG-VDINKWVEKIFEKNCIGKAI---IKDLKN 52 Query: 62 QDI--PDHDVLLAGFPCQPFS 80 I + D+++ G PC+P+S Sbjct: 53 DFIFDENPDIIVGGSPCKPWS 73 >gi|301328257|ref|ZP_07221377.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1] gi|300845286|gb|EFK73046.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1] Length = 341 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 12/88 (13%) Query: 1 ML--KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 M+ K+ DLFCG GG+ L+ ++ ++ Y+ N + I DIAK Sbjct: 1 MMTVKVIDLFCGAGGLTHGLQLA----GLDVVAGIDLEGECRFPYERNNKSKFIEQDIAK 56 Query: 59 IKTQDI------PDHDVLLAGFPCQPFS 80 + +++ VL PCQPFS Sbjct: 57 VTKEELLRLYGDASVKVLAGCAPCQPFS 84 >gi|238759658|ref|ZP_04620818.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236] gi|238702086|gb|EEP94643.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236] Length = 369 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLFCG GG+ L ++ + +I Y+ N T I D+ + Sbjct: 25 IKAVDLFCGAGGLTHGLIKS----GINVVAGYDIEESCRFAYEHNNNATFINQDVTSLSG 80 Query: 62 QDI------PDHDVLLAGFPCQPFS 80 ++ D+ +L PCQPFS Sbjct: 81 DEVLRHLKNADYTLLAGCAPCQPFS 105 >gi|326469309|gb|EGD93318.1| hypothetical protein TESG_00865 [Trichophyton tonsurans CBS 112818] Length = 584 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 D FCG GG+ +Q ++ ++ + ++ +Y+ANFP+ L ++A+ Sbjct: 278 YTFGDGFCGAGGVSRGAQQA----GLKLLWAFDKWESAINSYRANFPSCLAEHSEVAQFL 333 Query: 61 TQDIPD---HDVLLAGFPCQPFSQA 82 T +P DV+ PCQPFS A Sbjct: 334 TS-LPREILVDVIHVSPPCQPFSPA 357 >gi|328544214|ref|YP_004304323.1| Modification methylase DdeI [polymorphum gilvum SL003B-26A1] gi|326413956|gb|ADZ71019.1| Modification methylase DdeI [Polymorphum gilvum SL003B-26A1] Length = 480 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 26/103 (25%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFG--- 54 K DLF G GG+ L L + F+ E + + +T+ NF P F Sbjct: 45 KFVDLFSGCGGLSLGLSLA----GMRGLFAIERDDMAFETFSTNFIGDDSPEAYRFMWPS 100 Query: 55 --DIAKIKTQDI------------PDHDVLLAGFPCQPFSQAG 83 D ++ + +VL G PCQ FS AG Sbjct: 101 WLDQRAWGIDEVLGEHKEQLEQLRGEVEVLAGGPPCQGFSFAG 143 >gi|311896967|dbj|BAJ29375.1| putative DNA methyltransferase [Kitasatospora setae KM-6054] Length = 676 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLF G GG+ L L + + + + +++T+ ANFP + D+ + + Sbjct: 57 LDLFSGAGGLSLGLTRA----GWTLAAAVDHSGPALETHAANFPGMSLDVDLGEPAALEE 112 Query: 65 P---------DHDVLLAGFPCQPFSQAG 83 D++ G PCQPFS+AG Sbjct: 113 LLTLLQPAAGRIDLVAGGPPCQPFSRAG 140 >gi|254039141|ref|ZP_04873191.1| DNA-cytosine methyltransferase [Escherichia sp. 1_1_43] gi|226838577|gb|EEH70606.1| DNA-cytosine methyltransferase [Escherichia sp. 1_1_43] Length = 349 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 10/86 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+K+ DLFCG GG+ L+++ + +I+ Y+ N + + + I+ Sbjct: 1 MIKVVDLFCGAGGLTHGLQKS----GLNVVAGYDIDAACRFAYETNNKSLFVQKSVTDIE 56 Query: 61 TQDI------PDHDVLLAGFPCQPFS 80 ++ VL PCQPFS Sbjct: 57 DGELVKYFEGAKVRVLAGCAPCQPFS 82 >gi|156363806|ref|XP_001626231.1| predicted protein [Nematostella vectensis] gi|156213100|gb|EDO34131.1| predicted protein [Nematostella vectensis] Length = 623 Score = 69.0 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTL-IFGDIAK 58 +++ LF GI L Q N + + ++S+EI+ +++ + N + + GDI Sbjct: 337 IRVLALFDGI---ATGL-QALNELGIVSDKYYSAEIDEQAIQVTKVNHGDRITHLGDIKD 392 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQA 82 + I + D+++ G PCQ S A Sbjct: 393 LTESQIRELGPFDLVIGGSPCQDLSIA 419 >gi|170079525|ref|YP_001736159.1| cytosine-specific methyltransferase [Synechococcus sp. PCC 7002] gi|169887194|gb|ACB00904.1| Cytosine-specific methyltransferase [Synechococcus sp. PCC 7002] Length = 270 Score = 68.6 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 10/91 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--------KTYQANFPNTLI 52 ML+ +LF GIGG + + F +E +I+ + Y FP I Sbjct: 1 MLRHCELFGGIGGFSHAVAKYFPKT-IETTTYCDIDEQARSFAVPGGSAVYSEFFPKVTI 59 Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI Q + D++ GFPC SQAG Sbjct: 60 HKDIRTYYPQQ-KEFDLITCGFPCTGTSQAG 89 >gi|260579295|ref|ZP_05847178.1| modification methylase NaeI (cytosine-specificmethyltransferase NaeI) (M.NaeI) [Corynebacterium jeikeium ATCC 43734] gi|258602594|gb|EEW15888.1| modification methylase NaeI (cytosine-specificmethyltransferase NaeI) (M.NaeI) [Corynebacterium jeikeium ATCC 43734] Length = 372 Score = 68.6 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L ++ G GG L LE E++ ++V T +AN P ++ GD+ Sbjct: 36 LTSVEICAGAGGQALGLEAA----GFIHRAVVELDGHAVSTLRANRPAWNIVHGDVLDFD 91 Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83 D D+L G PC PFS AG Sbjct: 92 ISPFADDLDLLAGGVPCPPFSIAG 115 >gi|150402932|ref|YP_001330226.1| DNA-cytosine methyltransferase [Methanococcus maripaludis C7] gi|150033962|gb|ABR66075.1| DNA-cytosine methyltransferase [Methanococcus maripaludis C7] Length = 367 Score = 68.6 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 40/132 (30%), Gaps = 55/132 (41%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------- 50 + DLFCG GG + + + E++ + +Y N+ T Sbjct: 12 MNFIDLFCGCGGFSRGFVE----MGFKPLLAIELDENAANSYALNYNGTVFEKKLNEILE 67 Query: 51 -------------------------------LIFGDIAKIKTQDI---------PDHDVL 70 +I DI +I ++ I D++ Sbjct: 68 KEVYFKLEDFLVQDDIEEFKKLNNYENLNPVVINEDIREINSKYISNIVNNNSDSKIDLI 127 Query: 71 LAGFPCQPFSQA 82 + G PC+ ++ A Sbjct: 128 IGGPPCEGYTGA 139 >gi|149190497|ref|ZP_01868767.1| DNA-cytosine methyltransferase [Vibrio shilonii AK1] gi|148835621|gb|EDL52588.1| DNA-cytosine methyltransferase [Vibrio shilonii AK1] Length = 349 Score = 68.6 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 10/86 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++ DLFCG GG+ L++ ++ +I Y+ N I + ++ Sbjct: 1 MIRAIDLFCGAGGLTHGLQRA----GIDVVAGYDIEAQCRFAYERNNDAVFIQKSVTDLQ 56 Query: 61 TQDIPDH--D----VLLAGFPCQPFS 80 ++ + D VL PCQ FS Sbjct: 57 IEEFNHYFGDAEVRVLAGCAPCQTFS 82 >gi|283549178|ref|NP_001164522.1| DNA methyltransferase 1a [Apis mellifera] Length = 1366 Score = 68.6 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 LK D+F G GG+ L Q N ++ E + Y+ N PN +F Sbjct: 895 LKTLDVFAGCGGLSEGLHQAGVAEN---LWAIEKEESAAYAYRLNNPNATVFIEDCNVLL 951 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ Q +P ++L G PCQ FS Sbjct: 952 KKVMNGETTNEIGQKLPQKGQVELLCGGPPCQGFS 986 >gi|294949213|ref|XP_002786099.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239900227|gb|EER17895.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 125 Score = 68.6 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---KI 59 K+ +LF GIGG+R L + + + ++N S K Y ++ ++ I +IA + Sbjct: 7 KVLELFSGIGGMRCALASAGLIMSSKIT-AVDVNTESNKVYARSYGDSPIAKNIASAGSV 65 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 K D D+ PCQP+++ G Sbjct: 66 KWFDSMAADMWTLSPPCQPYTRQG 89 >gi|254804174|ref|YP_003082395.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|304388624|ref|ZP_07370688.1| possible DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] gi|254667716|emb|CBA03597.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|304337441|gb|EFM03611.1| possible DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC 13091] Length = 351 Score = 68.6 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 13/89 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D FCG GG+ ++ ++ + P +TY+AN I D+ +++ Sbjct: 6 LKAVDFFCGGGGMSYGMQSA----GIQVLAGIDYEPSCKETYEANINAKFIQADVFELQP 61 Query: 62 QDIP--------DHD-VLLAGFPCQPFSQ 81 + + D D +L+ PCQ +S Sbjct: 62 ETLEKELGLKKNDDDLILIGCSPCQYWSV 90 >gi|322691196|ref|YP_004220766.1| phage protein [Bifidobacterium longum subsp. longum JCM 1217] gi|320456052|dbj|BAJ66674.1| hypothetical phage protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 509 Score = 68.6 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 2/82 (2%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K LF G G+ + + + E S+I P + + P GDI KI Sbjct: 6 YKTISLFSGYLGLDIGVSKAIGE--GELVGWSDIEPGPLALGSHHAPKARRLGDITKIDW 63 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + D +V+ GF CQ S AG Sbjct: 64 EKYKDIEVMAGGFCCQSLSLAG 85 >gi|330997448|ref|ZP_08321299.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] gi|329570822|gb|EGG52538.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT 11841] Length = 417 Score = 68.6 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 31/110 (28%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 L DLF G GG+ Q+ + + E +T + + D + Sbjct: 7 LNTLDLFAGCGGLTEGFLQSGH---YHTIGAVEWERAPRETLKHRLQTAWGYNDADNVVV 63 Query: 60 -----KTQDI---------------------PDHDVLLAGFPCQPFSQAG 83 +T+++ DV++ G PCQ +S AG Sbjct: 64 RFDIQRTEELIHGFDDPVYGLHEGLENLVGGRAVDVIIGGPPCQAYSLAG 113 >gi|237726505|ref|ZP_04556986.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. D4] gi|229435031|gb|EEO45108.1| C-5 cytosine-specific DNA methylase [Bacteroides dorei 5_1_36/D4] Length = 356 Score = 68.6 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ DLFCGIGG+ + + ++ +++ + Y+ N IF DI ++ Sbjct: 11 IEVVDLFCGIGGLSYGM----KSKGLKIRAGFDLDQTCLYAYETNNEAKFIFKDIRTVRK 66 Query: 62 QDI------PDHDVLLAGFPCQPFS 80 ++I VL PCQPFS Sbjct: 67 EEIIPFYSKKSIKVLAGCAPCQPFS 91 >gi|121635670|ref|YP_975915.1| modification methylase (cytosine-specific DNA methylase) [Neisseria meningitidis FAM18] gi|218767413|ref|YP_002341925.1| modification methylase (cytosine-specific DNA methylase) [Neisseria meningitidis Z2491] gi|120867376|emb|CAM11148.1| modification methylase (cytosine-specific DNA methylase) [Neisseria meningitidis FAM18] gi|121051421|emb|CAM07714.1| modification methylase (cytosine-specific DNA methylase) [Neisseria meningitidis Z2491] gi|261393340|emb|CAX50974.1| putative cytosine-specific methyltransferase [Neisseria meningitidis 8013] gi|319409676|emb|CBY89977.1| putative cytosine-specific methyltransferase [Neisseria meningitidis WUE 2594] gi|325131421|gb|EGC54130.1| modification methylase [Neisseria meningitidis M6190] Length = 351 Score = 68.6 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 13/89 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D FCG GG+ ++ ++ + P +TY+AN I D+ +++ Sbjct: 6 LKAVDFFCGGGGMSYGMQSA----GIQVLAGIDYEPSCKETYEANINAKFIQADVFELQP 61 Query: 62 QDIP--------DHD-VLLAGFPCQPFSQ 81 + + D D +L+ PCQ +S Sbjct: 62 ETLEKELGLKKNDDDLILIGCSPCQYWSV 90 >gi|254671709|emb|CBA09495.1| modification methylase [Neisseria meningitidis alpha153] Length = 351 Score = 68.6 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 13/89 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D FCG GG+ ++ ++ + P +TY+AN I D+ +++ Sbjct: 6 LKAVDFFCGGGGMSYGMQSA----GIQVLAGIDYEPSCKETYEANINAKFIQADVFELQP 61 Query: 62 QDIP--------DHD-VLLAGFPCQPFSQ 81 + + D D +L+ PCQ +S Sbjct: 62 ETLEKELGLKKNDDDLILIGCSPCQYWSV 90 >gi|229489314|ref|ZP_04383178.1| DNA methylase [Rhodococcus erythropolis SK121] gi|229323807|gb|EEN89564.1| DNA methylase [Rhodococcus erythropolis SK121] Length = 358 Score = 68.6 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 6/81 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ DLF G GG+ + + E + + T +A + GD+ + Sbjct: 15 RMVDLFAGPGGLDVAAHWLGVPVHG-----VEWDKDACVTRRA-AGLSTEEGDVRCVGPA 68 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + P VL G PCQ ++ AG Sbjct: 69 NFPGTTVLAGGPPCQTYTLAG 89 >gi|229133284|ref|ZP_04262113.1| Phage-related DNA methylase [Bacillus cereus BDRD-ST196] gi|228650100|gb|EEL06106.1| Phage-related DNA methylase [Bacillus cereus BDRD-ST196] Length = 73 Score = 68.6 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAK 58 L D F G+G R+ +EQ + +C E + + KTY+A N DI Sbjct: 3 LTFIDWFAGVGMARIGMEQAGH----KCVGYCEWDKAARKTYEAMHNNNGEWTEVDIRD 57 >gi|288941188|ref|YP_003443428.1| DNA-cytosine methyltransferase [Allochromatium vinosum DSM 180] gi|288896560|gb|ADC62396.1| DNA-cytosine methyltransferase [Allochromatium vinosum DSM 180] Length = 372 Score = 68.6 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLFCG+GG+ L + ++ +I+ Y+AN P I D+ + Sbjct: 15 IKAVDLFCGVGGLTHGLSRG----GIQVMAGIDIDASCRYPYEANNPARFIEHDVGTLPP 70 Query: 62 QDI------PDHDVLLAGFPCQPFS 80 I D+ +L PCQPFS Sbjct: 71 DLITPYYENADYTLLAGCAPCQPFS 95 >gi|194303019|ref|YP_002014288.1| gp72 [Mycobacterium phage Boomer] gi|194153067|gb|ACF34134.1| gp72 [Mycobacterium phage Boomer] Length = 475 Score = 68.6 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPNT-LIFGDIAK 58 ML + D+FCG GG Q +E ++ +V+T+ AN P T I D+++ Sbjct: 1 MLTLLDMFCGAGGSSTGAVQV---PGIEVRVAANHW-KLAVETHGANHPTTDHICADLSQ 56 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQA 82 I + P+ D+L A C S A Sbjct: 57 IDPRLFPNTDILWASPSCTKHSIA 80 >gi|109522148|ref|YP_655825.1| gp64 [Mycobacterium phage PMC] gi|91980848|gb|ABE67565.1| gp64 [Mycobacterium phage PMC] Length = 475 Score = 68.6 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPNT-LIFGDIAK 58 ML + D+FCG GG Q +E ++ +V+T+ AN P T I D+++ Sbjct: 1 MLTLLDMFCGAGGSSTGAVQV---PGIEVRVAANHW-KLAVETHGANHPTTDHICADLSQ 56 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQA 82 I + P+ D+L A C S A Sbjct: 57 IDPRLFPNTDILWASPSCTKHSIA 80 >gi|148271753|ref|YP_001221314.1| putative cytosine-specific DNA methylase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829683|emb|CAN00599.1| putative cytosine-specific DNA methylase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 391 Score = 68.6 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 12/89 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFGD 55 K+ + F G+G R+ LE + ++++ P Y+ NF + GD Sbjct: 16 KVMEFFAGVGLARMGLESA----GFQVTWANDYEPDKHALYERNFRDREAGRDHIYRVGD 71 Query: 56 IAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 + + ++P D + PC S AG Sbjct: 72 VFGLDHDELPRDAALAWGSSPCTDLSLAG 100 >gi|78047842|ref|YP_364017.1| cytosine-specific DNA methyltransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036272|emb|CAJ23963.1| cytosine-specific DNA methyltransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 512 Score = 68.6 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----KTQD 63 GI + + +E + +EI P+ ++P+ GD+ I Sbjct: 15 CSGI----EAVSLAWQPLGLEAAWFAEIEPFPSAVLAHHYPHVPNLGDMTTIARQVHAGT 70 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+L+ G PCQ FS AG Sbjct: 71 VPAPDILVGGTPCQSFSVAG 90 >gi|237728463|ref|ZP_04558944.1| DNA-cytosine methyltransferase [Citrobacter sp. 30_2] gi|226909941|gb|EEH95859.1| DNA-cytosine methyltransferase [Citrobacter sp. 30_2] Length = 318 Score = 68.6 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++ G GG L LE + E+ P + T + N P +I D+ + Sbjct: 4 FNSLEMCAGAGGQALGLEMA----GFDHAALVELEPAACATLRLNRPAWNVIEDDLRRFD 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + D++ G PC PFS+AG Sbjct: 60 GRPYQGIDLVAGGVPCPPFSKAG 82 >gi|17233286|ref|NP_490376.1| hypothetical protein all7270 [Nostoc sp. PCC 7120] gi|17135808|dbj|BAB78354.1| all7270 [Nostoc sp. PCC 7120] Length = 238 Score = 68.2 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Query: 1 MLKITDLFCGIGGI-RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 M + LF GIGG+ + + EI+PYS + P T I DI Sbjct: 1 MKSVLSLFSGIGGLCHHGIAAAGLSHKFQVKQFVEISPYSQSQLRHEQPQTPIHSDITTY 60 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 D++ GFPC S +G Sbjct: 61 NCH-RGQFDIVCGGFPCAGTSNSG 83 >gi|325567983|ref|ZP_08144484.1| type II DNA modification methyltransferase Spn5252IP [Enterococcus casseliflavus ATCC 12755] gi|325158457|gb|EGC70607.1| type II DNA modification methyltransferase Spn5252IP [Enterococcus casseliflavus ATCC 12755] Length = 176 Score = 68.2 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 7/68 (10%) Query: 22 FNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIAKIKTQDIP---DHDVLLAGFP 75 C EI+ ++ K+YQ+ P+T + DI K + I +++ GFP Sbjct: 1 MEQAGYRCVGYCEIDGHARKSYQS-IPDTKQEVEMYDITKFSDEFIRGIGRVNIIAGGFP 59 Query: 76 CQPFSQAG 83 CQ FS AG Sbjct: 60 CQAFSLAG 67 >gi|91773503|ref|YP_566195.1| DNA-cytosine methyltransferase [Methanococcoides burtonii DSM 6242] gi|91712518|gb|ABE52445.1| DNA-cytosine methyltransferase [Methanococcoides burtonii DSM 6242] Length = 569 Score = 68.2 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 20/98 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 + D FCG GG Q E F+ +I + +T++ N PN F Sbjct: 5 FTVADFFCGAGGSSEGFRQA----GFEIVFALDIWNPARETHKLNHPNCAHFGLDCYKDK 60 Query: 54 -GDIAKIKT----QDIPDHDVLLAGFPCQPFS---QAG 83 GDI KI+T IPD DV++ PC FS +AG Sbjct: 61 DGDILKIETTDIDDVIPDVDVIVGSPPCVSFSSSNRAG 98 >gi|66768381|ref|YP_243143.1| DNA methyltransferase [Xanthomonas campestris pv. campestris str. 8004] gi|66573713|gb|AAY49123.1| DNA methyltransferase [Xanthomonas campestris pv. campestris str. 8004] Length = 512 Score = 68.2 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----KIKTQD 63 GI + + +E + +EI P+ ++P+ GD+ ++ Sbjct: 15 CSGI----EAVSLAWQPLGLEAAWFAEIEPFPSAVLAHHYPHVPNLGDMTMIARQVHAGT 70 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+L+ G PCQ FS AG Sbjct: 71 VPAPDILVGGTPCQSFSVAG 90 >gi|319428134|gb|ADV56208.1| DNA-cytosine methyltransferase [Shewanella putrefaciens 200] Length = 305 Score = 68.2 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI 59 M++ DLF G GG + V +++ N +V ++ N P D+ + Sbjct: 1 MVRGIDLFAGAGGTTSGAKMA----GVRMVWAANHNRTAVDYHEINHPEVKHAHQDLQQA 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 +PDHD++ A CQ S+A Sbjct: 57 NWALVPDHDIVFASPCCQGHSRA 79 >gi|332878260|ref|ZP_08445986.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683711|gb|EGJ56582.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 424 Score = 68.2 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 38/130 (29%), Gaps = 52/130 (40%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA----NF---------- 47 L DLF G GG+ Q E++ ++ T + ++ Sbjct: 6 LNFIDLFAGAGGLSEGFVQA----GYIPIAHIEMDRHACDTLKTRAAFHWLKANNQLHKY 61 Query: 48 --------------------PNTLIFGDI-AKIKTQDI-------------PDHDVLLAG 73 P +I I ++I I D+++ G Sbjct: 62 KEYLYKKQEKEDGSKLWAQVPEEVINSVIQSEIGENTILNLFKQVDSLIKDKKIDLIIGG 121 Query: 74 FPCQPFSQAG 83 PCQ +S AG Sbjct: 122 PPCQAYSIAG 131 >gi|251792768|ref|YP_003007494.1| DNA-cytosine methyltransferase [Aggregatibacter aphrophilus NJ8700] gi|247534161|gb|ACS97407.1| DNA-cytosine methyltransferase [Aggregatibacter aphrophilus NJ8700] Length = 383 Score = 68.2 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M + GI + + + SEI P+ Q ++PN GD+ + Sbjct: 1 MFSYGSVCSGIEAVSVA-----WQDFATPLWFSEIEPFPCALLQHHYPNVPNLGDMQNLP 55 Query: 61 TQ----DIPDHDVLLAGFPCQPFSQAG 83 + +IP DVL+ G PCQ +S AG Sbjct: 56 QKILHREIPAPDVLIGGTPCQSYSYAG 82 >gi|255020360|ref|ZP_05292428.1| DNA-cytosine methyltransferase [Acidithiobacillus caldus ATCC 51756] gi|254970280|gb|EET27774.1| DNA-cytosine methyltransferase [Acidithiobacillus caldus ATCC 51756] Length = 449 Score = 68.2 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 28/103 (27%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTL----------- 51 DLF G GG+ L L++ F+ E +P + +T NF P Sbjct: 12 IDLFAGCGGLSLGLKEAGWSG----LFAIERDPMAFETLSQNFLVPGAPYASFADWPAWL 67 Query: 52 --IFGDI-AKIKTQDIPDH--------DVLLAGFPCQPFSQAG 83 DI A +K + + H ++ G PCQ FS G Sbjct: 68 PKTNHDIVALLKNESVRKHLRSLRGAVTMIAGGPPCQGFSVGG 110 >gi|282879499|ref|ZP_06288233.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS 5C-B1] gi|281306646|gb|EFA98672.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS 5C-B1] Length = 438 Score = 68.2 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59 +++ +F GIG I L++ F+ +I+ K+Y AN+ F D Sbjct: 62 IRLGTMFSGIGAIEHALQRL--RLKHHIVFAGDIDANCKKSYFANYDIKEKDWFNDARTF 119 Query: 60 KTQDIP-DHDVLLAGFPCQPFSQAG 83 + D+L+ G PCQ FS G Sbjct: 120 DARKYRGQIDLLVGGAPCQAFSMVG 144 >gi|255946093|ref|XP_002563814.1| Pc20g13340 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588549|emb|CAP86663.1| Pc20g13340 [Penicillium chrysogenum Wisconsin 54-1255] Length = 627 Score = 68.2 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 D +CG GG+ +Q ++ ++ +I+ ++++TYQ NF + + D Sbjct: 321 YTFGDAYCGAGGVSCGAKQA----GLKLQWAVDIDKHALETYQLNFDDVEVEHSDFFSFL 376 Query: 61 TQD--IPDHDVLLAGFPCQPFSQA 82 T D D+ PCQ +S A Sbjct: 377 TNDPRFLRVDIAHCSPPCQTWSPA 400 >gi|121582558|ref|YP_974087.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42] gi|120608614|gb|ABM44352.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42] Length = 318 Score = 68.2 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++ G GG L LE + E+ P + T + N P +I D+ + Sbjct: 4 FNSLEMCAGAGGQALGLEMA----GFDHAALVELEPAACATLRLNRPAWNVIEDDLRRFD 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + D++ G PC PFS+AG Sbjct: 60 GRPYQGIDLVAGGVPCPPFSKAG 82 >gi|121703830|ref|XP_001270179.1| C-5 cytosine methyltransferase DmtA [Aspergillus clavatus NRRL 1] gi|119398323|gb|EAW08753.1| C-5 cytosine methyltransferase DmtA [Aspergillus clavatus NRRL 1] Length = 617 Score = 68.2 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 D FCG GG+ ++ H ++ + + +++ TY+ NF L DI Sbjct: 310 YTFGDGFCGAGGVSSGAQKAGLH----IKWAFDQSEHAIATYRMNFETALCEQSDIFSFL 365 Query: 61 TQ--DIPDHDVLLAGFPCQPFSQA 82 T D DV PCQ FS A Sbjct: 366 TNGPDFLKVDVSHGSPPCQTFSPA 389 >gi|332664528|ref|YP_004447316.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM 1100] gi|332333342|gb|AEE50443.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM 1100] Length = 420 Score = 68.2 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 34/127 (26%), Gaps = 49/127 (38%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA---------------- 45 DLF G GG+ Q E E+ + T + Sbjct: 3 YNFIDLFAGAGGLSEGFIQA----GFEPIAHVELEKSACNTLKTRAAYHYLKSNKRHEIY 58 Query: 46 ---------------NFPNTLIFGDI--------AKIKTQDIPD------HDVLLAGFPC 76 N PN ++ I + I D+++ G PC Sbjct: 59 ISYLKGEITRAELYDNVPNEILASVINLSIGDENNNLIFNQIDSYLGKGAVDLIIGGPPC 118 Query: 77 QPFSQAG 83 Q +S AG Sbjct: 119 QAYSVAG 125 >gi|313905794|ref|ZP_07839153.1| DNA-cytosine methyltransferase [Eubacterium cellulosolvens 6] gi|313469400|gb|EFR64743.1| DNA-cytosine methyltransferase [Eubacterium cellulosolvens 6] Length = 427 Score = 68.2 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 39/130 (30%), Gaps = 52/130 (40%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY-------------QANFP 48 DLF G GG+ Q E+NPY+ KT + N Sbjct: 10 YNFIDLFAGAGGLSEGFMQ----VGFSPIAHVEMNPYAAKTLETRTGYFYLKEQGKLNIY 65 Query: 49 NTLIFGDIAK-----------------------------------IKTQDIPDHDVLLAG 73 + G+I++ +K Q I DV++ G Sbjct: 66 YDYLKGNISREKFLEYIPERLLQSVICETMSDESLPELFERIDKSMKEQGISHVDVIIGG 125 Query: 74 FPCQPFSQAG 83 PCQ +S G Sbjct: 126 PPCQAYSLVG 135 >gi|258514794|ref|YP_003191016.1| DNA-cytosine methyltransferase [Desulfotomaculum acetoxidans DSM 771] gi|257778499|gb|ACV62393.1| DNA-cytosine methyltransferase [Desulfotomaculum acetoxidans DSM 771] Length = 402 Score = 68.2 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 13/92 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNTLIFG-- 54 M +LF G GG+ L L+++ + E + S +AN FP + Sbjct: 1 MYSSIELFSGTGGLALGLQKS----GFDHRALLEWDKDSCDNIKANIERGFPLVQNWNVI 56 Query: 55 --DIAKIKTQDIPD-HDVLLAGFPCQPFSQAG 83 D+ + D + ++ G PCQPFS G Sbjct: 57 QTDVKLVHYDDFGEGIKLVAGGPPCQPFSLGG 88 >gi|31074161|gb|AAP20551.1| DNA cytosine-5 methyltransferase 1 [Bos taurus] Length = 1611 Score = 68.2 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P + +F Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRFNNPGSTVFTKDCNVL 1191 Query: 54 ------GDIAKIKTQDI---PDHDVLLAGFPCQPFS 80 G++ + Q + D ++L G PCQ FS Sbjct: 1192 VKLVMAGEVTNSRGQKLLQKGDVEMLCGGPPCQGFS 1227 >gi|116748761|ref|YP_845448.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB] gi|116697825|gb|ABK17013.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB] Length = 429 Score = 68.2 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 14/86 (16%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKIKTQ 62 LF G GG+ L LE ++ C E+ + +T + N P+ + G I +I Sbjct: 26 ISLFTGAGGLDLGLEAAGFCISI-CV---EVAKDAQETLKVNRPHWKLAEPGHIHQISPP 81 Query: 63 DIPDHD--------VLLAGFPCQPFS 80 +I + +L G PCQPFS Sbjct: 82 EILEQSNLRRGELALLSGGPPCQPFS 107 >gi|302773662|ref|XP_002970248.1| hypothetical protein SELMODRAFT_411110 [Selaginella moellendorffii] gi|300161764|gb|EFJ28378.1| hypothetical protein SELMODRAFT_411110 [Selaginella moellendorffii] Length = 565 Score = 68.2 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 16/93 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------PNTLIFGD 55 +++ LF GIGGI + LE+ S E + + ++ + ++ GD Sbjct: 438 IRVLSLFSGIGGIEVALEKLGIPIKF--LVSVETSADCHRVLRSWWHRTRQRGTHIVLGD 495 Query: 56 IAKIKTQDIPD--------HDVLLAGFPCQPFS 80 + ++ + I + D++ G PC FS Sbjct: 496 VTELSRERIEELAARAGGGFDLVAGGSPCNNFS 528 >gi|167751359|ref|ZP_02423486.1| hypothetical protein EUBSIR_02345 [Eubacterium siraeum DSM 15702] gi|167655605|gb|EDR99734.1| hypothetical protein EUBSIR_02345 [Eubacterium siraeum DSM 15702] Length = 349 Score = 68.2 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 10/83 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG+GG+ L + +I+P TY+ N +I ++ +++ Sbjct: 6 IDLFCGVGGLTRGLLDA----GLNVVAGFDIDPTCQFTYEFNNHVDYHLRNIREVMGEEL 61 Query: 65 PDH-D-----VLLAGFPCQPFSQ 81 + D +L+ PCQPFSQ Sbjct: 62 NEIYDENVTKILVGCAPCQPFSQ 84 >gi|227503804|ref|ZP_03933853.1| DNA restriction-modification system, DNA methylase [Corynebacterium striatum ATCC 6940] gi|227199628|gb|EEI79676.1| DNA restriction-modification system, DNA methylase [Corynebacterium striatum ATCC 6940] Length = 455 Score = 67.9 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 12/86 (13%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-------DIAK 58 ++ G GG L LEQ H EI+ ++ +T + N G D+ Sbjct: 120 EICAGAGGQALGLEQAGFHH----AAVVEIDNWAAETLRQNRGTEGPLGKWNVHEMDVHD 175 Query: 59 IKTQDIP-DHDVLLAGFPCQPFSQAG 83 + + D+ G PC PFS AG Sbjct: 176 LDGRPWRGKIDLFAGGVPCPPFSIAG 201 >gi|320331149|gb|EFW87118.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 145 Score = 67.9 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 7/86 (8%) Query: 1 MLKITDL--FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIA 57 M + T L G GG L LE E EI P + T + N P + D+ Sbjct: 18 MSRFTSLEMCAGAGGQALGLEMAG--FGHEAL--VEIEPPACATLRLNRPEWNVKEEDLR 73 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83 + D++ G PC PFS+AG Sbjct: 74 QFNGSPFFGVDLVAGGVPCPPFSKAG 99 >gi|212695555|ref|ZP_03303683.1| hypothetical protein ANHYDRO_00072 [Anaerococcus hydrogenalis DSM 7454] gi|212677433|gb|EEB37040.1| hypothetical protein ANHYDRO_00072 [Anaerococcus hydrogenalis DSM 7454] Length = 321 Score = 67.9 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 11/85 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA----NFPNTLIFGDIAK 58 KI +LF GIG IR E EI+ VK+Y A N+ + G K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNALYGENYKPKSVVG--YK 60 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 I + I D+++ G PCQ FS+ G Sbjct: 61 IPNEKI---DLIMHGSPCQDFSRIG 82 >gi|21242948|ref|NP_642530.1| cytosine-specific DNA methyltransferase [Xanthomonas axonopodis pv. citri str. 306] gi|21108450|gb|AAM37066.1| cytosine-specific DNA methyltransferase [Xanthomonas axonopodis pv. citri str. 306] Length = 487 Score = 67.9 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----IKTQD 63 GI + + ++ + SE + ++ +P+ GD+ + I+ + Sbjct: 17 CSGI----EAVSLAWEPLGLKPAWFSETDAFASAVLAHRYPHVPNLGDMTRLAQRIRDRS 72 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+L+ G PCQ FS AG Sbjct: 73 VPAPDILVGGTPCQSFSVAG 92 >gi|74136491|ref|NP_001028141.1| DNA (cytosine-5)-methyltransferase 1 [Monodelphis domestica] gi|22023943|gb|AAM89258.1|AF527541_1 cytosine-5-methyltransferase [Monodelphis domestica] Length = 1514 Score = 67.9 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F Sbjct: 1037 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1093 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ Q +P D ++L G PCQ FS Sbjct: 1094 KLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 1128 >gi|242022906|ref|XP_002431878.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus corporis] gi|212517219|gb|EEB19140.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus corporis] Length = 1330 Score = 67.9 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L+ D+F G GG+ L Q+ + ++ E + + ++ N PN +F Sbjct: 872 LRTLDVFAGCGGLSEGLHQSGVS---KTLWAIEQDSDAASAFKQNNPNATVFTEDCNTLL 928 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G + K Q +P + D++ G PCQ FS Sbjct: 929 KEVMSGKLKNDKGQCLPQKGEVDLICGGPPCQGFS 963 >gi|163855756|ref|YP_001630054.1| putative DNA-cytosine methyltransferase [Bordetella petrii DSM 12804] gi|163259484|emb|CAP41784.1| putative DNA-cytosine methyltransferase [Bordetella petrii] Length = 201 Score = 67.9 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----KIKTQD 63 GI + + +E + +EI P+ +P+ GD+ +++ Sbjct: 24 CSGI----EAVSLAWQPLGLEAAWFAEIEPFPSAVLAHRYPHVPNLGDMTAIARQVRAGT 79 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+L+ G PCQ FS AG Sbjct: 80 VPAPDILVGGTPCQSFSVAG 99 >gi|198422315|ref|XP_002126359.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha [Ciona intestinalis] Length = 678 Score = 67.9 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 5/84 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ LF GI + L+Q ++ F +SEI+ +++ Q P + GDI K+ Sbjct: 386 IRVLSLFDGIATGVVALKQLG--LQIQKFVASEIDEAAIRLVQNRHPEVMHVGDITKLTD 443 Query: 62 QDI---PDHDVLLAGFPCQPFSQA 82 DI D+++ G PC S A Sbjct: 444 DDITRYGPFDLVMGGSPCNDLSGA 467 >gi|50841408|gb|AAT84068.1| 5-cytosine DNA methyltransferase [Entamoeba invadens] Length = 324 Score = 67.9 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 3/80 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+I + F GIGG+R LE++ H N F + +IN + Y+ N+ ++ ++ + Sbjct: 9 LRILEFFSGIGGLRASLERSKVHTN-TTFCAIDINEIANTIYEGNYKEKVVVKNLDTVSV 67 Query: 62 QDIPD--HDVLLAGFPCQPF 79 + I + +V PCQP+ Sbjct: 68 EWIEEKRANVWFMSPPCQPY 87 >gi|331655761|ref|ZP_08356750.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M718] gi|331046535|gb|EGI18624.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M718] Length = 754 Score = 67.9 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----D 63 GI + + + +EI + +P+ GD+ K+ + + Sbjct: 10 CSGI----EAASIAWEPLGMRPVWFAEIESFPSAVLAHRWPHVANLGDMTKLAKKVLAGE 65 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 I DVL+ G PCQ FS AG Sbjct: 66 IESPDVLVGGTPCQAFSIAG 85 >gi|46048774|ref|NP_996835.1| DNA (cytosine-5)-methyltransferase 1 [Gallus gallus] gi|12230343|sp|Q92072|DNMT1_CHICK RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1; AltName: Full=DNA methyltransferase GgaI; Short=DNA MTase GgaI; Short=M.GgaI; AltName: Full=MCMT gi|1109610|dbj|BAA07867.1| DNA (cytosine-5-)-methyltransferase [Gallus gallus] gi|1096715|prf||2112268A DNA methyltransferase Length = 1537 Score = 67.9 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F Sbjct: 1054 LRTLDVFSGCGGLSEGFHQAGVS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1110 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ Q +P D ++L G PCQ FS Sbjct: 1111 KLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 1145 >gi|323969240|gb|EGB64542.1| DNA adenine methylase [Escherichia coli TA007] Length = 754 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----D 63 GI + + + +EI P+ +P+ GD+ K+ + + Sbjct: 10 CSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLAHRWPHVANLGDMTKLAKKVLAGE 65 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 I DVL+ G PCQ FS AG Sbjct: 66 IESPDVLVGGTPCQAFSIAG 85 >gi|291529734|emb|CBK95320.1| DNA-methyltransferase (dcm) [Eubacterium rectale M104/1] Length = 339 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LKI +LF GIG R L+ ++ EI PY+V Y + F N D+ K Sbjct: 12 LKILELFGGIGAPRKALQNLG--YQLKSIDYVEILPYAVMAYNSIFDNGYKPQDVTKWNL 69 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D DVL+ G PCQ +S+ G Sbjct: 70 ----DPDVLIHGSPCQDWSKNG 87 >gi|2558956|gb|AAC49849.1| Masc1 [Ascobolus immersus] Length = 537 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 8/85 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57 D FCG GG+ L Q +E ++ ++NP + Y+ NFPNT F Sbjct: 227 YTFGDTFCGGGGVSLGARQA----GLEVKWAFDMNPNAGANYRRNFPNTDFFLAEAEQFI 282 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82 ++ D+L PCQ FS+A Sbjct: 283 QLSVGISQHVDILHLSPPCQTFSRA 307 >gi|332852917|ref|XP_512361.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 11 [Pan troglodytes] Length = 1632 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 1155 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 1210 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1211 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1246 >gi|332253285|ref|XP_003275776.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 1 [Nomascus leucogenys] gi|332253287|ref|XP_003275777.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 2 [Nomascus leucogenys] gi|332253289|ref|XP_003275778.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 3 [Nomascus leucogenys] Length = 1347 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 870 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 925 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 926 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 961 >gi|315583650|pdb|3PTA|A Chain A, Crystal Structure Of Human Dnmt1(646-1600) In Complex With Dna Length = 956 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 495 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 550 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 551 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 586 >gi|297703536|ref|XP_002828696.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1-like [Pongo abelii] Length = 1664 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 1187 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 1242 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1243 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1278 >gi|193783730|dbj|BAG53712.1| unnamed protein product [Homo sapiens] Length = 540 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 63 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 118 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 119 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 154 >gi|168277642|dbj|BAG10799.1| DNA (cytosine-5)-methyltransferase 1 [synthetic construct] Length = 1498 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 1018 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 1073 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1074 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1109 >gi|119604485|gb|EAW84079.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens] gi|119604486|gb|EAW84080.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens] Length = 1678 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 1201 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 1256 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1257 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1292 >gi|195927037|ref|NP_001124295.1| DNA (cytosine-5)-methyltransferase 1 isoform a [Homo sapiens] gi|116496659|gb|AAI26228.1| DNMT1 protein [Homo sapiens] gi|219521538|gb|AAI44094.1| DNA (cytosine-5-)-methyltransferase 1 [Homo sapiens] Length = 1632 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 1155 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 1210 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1211 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1246 >gi|114675302|ref|XP_001163722.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 1 isoform 9 [Pan troglodytes] Length = 1671 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 1194 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 1249 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1250 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1285 >gi|114675322|ref|XP_001163364.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 1 isoform 1 [Pan troglodytes] Length = 1502 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 1194 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 1249 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1250 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1285 >gi|114675312|ref|XP_001163590.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 6 [Pan troglodytes] Length = 1519 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 1042 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 1097 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1098 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1133 >gi|114675304|ref|XP_001163764.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 10 [Pan troglodytes] Length = 1678 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 1201 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 1256 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1257 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1292 >gi|114675320|ref|XP_001163398.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 1 isoform 2 [Pan troglodytes] Length = 1546 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 1194 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 1249 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1250 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1285 >gi|114675318|ref|XP_001163512.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 1 isoform 4 [Pan troglodytes] Length = 1632 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 1194 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 1249 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1250 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1285 >gi|114675308|ref|XP_001163659.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) - human isoform 7 [Pan troglodytes] gi|114675310|ref|XP_001163694.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) - human isoform 8 [Pan troglodytes] Length = 1495 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 1018 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 1073 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1074 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1109 >gi|114675316|ref|XP_001163475.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) - human isoform 3 [Pan troglodytes] Length = 1036 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 559 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 614 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 615 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 650 >gi|67970373|dbj|BAE01529.1| unnamed protein product [Macaca fascicularis] Length = 493 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 238 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 293 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 294 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 329 >gi|62088406|dbj|BAD92650.1| DNA (cytosine-5-)-methyltransferase 1 variant [Homo sapiens] Length = 1606 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 1126 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 1181 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1182 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1217 >gi|62204780|gb|AAH92517.1| DNMT1 protein [Homo sapiens] Length = 1511 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 1034 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 1089 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1090 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1125 >gi|4503351|ref|NP_001370.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Homo sapiens] gi|12231019|sp|P26358|DNMT1_HUMAN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1; AltName: Full=CXXC-type zinc finger protein 9; AltName: Full=DNA methyltransferase HsaI; Short=DNA MTase HsaI; Short=M.HsaI; AltName: Full=MCMT gi|1632819|emb|CAA45219.1| DNA (cytosine-5-)-methyltransferase [Homo sapiens] Length = 1616 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 1139 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 1194 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 1195 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1230 >gi|304399150|ref|ZP_07381018.1| DNA adenine methylase [Pantoea sp. aB] gi|304353390|gb|EFM17769.1| DNA adenine methylase [Pantoea sp. aB] Length = 808 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 8/87 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI- 59 M+ + GI + + + +EI + FP GD+ I Sbjct: 1 MITYGSVCSGI----EAASVAWEGLGWKAAWFAEIEKFPAAVLAHRFPAVPNLGDMTTIA 56 Query: 60 ---KTQDIPDHDVLLAGFPCQPFSQAG 83 + IP V++ G PCQ FS AG Sbjct: 57 AGVRAGSIPAPAVMVGGTPCQAFSIAG 83 >gi|326483421|gb|EGE07431.1| C-5 cytosine methyltransferase DmtA [Trichophyton equinum CBS 127.97] Length = 584 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 D FCG GG+ +Q ++ ++ + ++ +Y+ANFP+ L ++A+ Sbjct: 278 YTFGDGFCGAGGVSRGAQQA----GLKLLWAFDKWESAINSYRANFPSCLAEHSEVAQFL 333 Query: 61 TQDIPD---HDVLLAGFPCQPFSQA 82 T +P DV+ PCQPFS A Sbjct: 334 TS-LPREILVDVMHVSPPCQPFSPA 357 >gi|148555450|ref|YP_001263032.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1] gi|148500640|gb|ABQ68894.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1] Length = 400 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 34/96 (35%), Gaps = 24/96 (25%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIFGDI- 56 + F G GG+ L E + + EIN KT + N F + GD+ Sbjct: 74 LVSFFTGCGGMDLGFES----VGYQHVAAFEINELFCKTLRRNRPEWKVFGPPVHSGDVS 129 Query: 57 ----------AKIKTQDIPDHDVLLAGFPCQPFSQA 82 IK P V G PCQPFS A Sbjct: 130 MFENVAAALRTVIKA---PFEGVFAGGPPCQPFSIA 162 >gi|152982884|ref|YP_001351698.1| site-specific DNA methylase [Janthinobacterium sp. Marseille] gi|151282961|gb|ABR91371.1| Site-specific DNA methylase [Janthinobacterium sp. Marseille] Length = 425 Score = 67.9 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 8/83 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKIKT 61 + F G G R L C F+++ + + Y+ N+ L+ D+ KI T Sbjct: 48 FFEFFAGGGMARAGL-----GERWNCQFANDNSAMKGQVYRKNWHGGPELVIEDVNKITT 102 Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83 + + D++ A FPCQ S AG Sbjct: 103 RHLSGTPDLIWASFPCQDLSLAG 125 >gi|329937998|ref|ZP_08287480.1| putative 5-methylcytosine methyltransferase [Streptomyces griseoaurantiacus M045] gi|329302955|gb|EGG46844.1| putative 5-methylcytosine methyltransferase [Streptomyces griseoaurantiacus M045] Length = 426 Score = 67.5 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 12/85 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIKTQ 62 + DLF G GG+ + + E + + T Y A + D++ ++ + Sbjct: 16 VLDLFAGPGGLD----SACHRLGIPSLG-IEWDKSACLTRYAA--GLDTLHADVSAVRRE 68 Query: 63 DI----PDHDVLLAGFPCQPFSQAG 83 P+ +VL G PCQ +S AG Sbjct: 69 SFESLPPEINVLAGGPPCQTYSVAG 93 >gi|300723947|ref|YP_003713260.1| hypothetical protein XNC1_3088 [Xenorhabdus nematophila ATCC 19061] gi|297630477|emb|CBJ91142.1| Dmt (fragment) [Xenorhabdus nematophila ATCC 19061] Length = 389 Score = 67.5 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 12/87 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61 + GI + + + SEI + + + ++P L GD+ +I Sbjct: 17 TFGSVCSGI----EAASVAWEPLGLFPSWFSEIEKFPSEVLRYHWPYVLNLGDMTQISAL 72 Query: 62 -----QDIPDHDVLLAGFPCQPFSQAG 83 D P D+L+ G PCQ FS AG Sbjct: 73 IAENQADAP--DILVGGTPCQAFSIAG 97 >gi|18312788|ref|NP_559455.1| C-5 cytosine-specific DNA methylase [Pyrobaculum aerophilum str. IM2] gi|18160272|gb|AAL63637.1| C-5 cytosine-specific DNA methylase [Pyrobaculum aerophilum str. IM2] Length = 314 Score = 67.5 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Query: 25 RNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDI----PDHDVLLAGFPCQPF 79 + + +I+ +V+TY AN T+I DI I D+ D DV++ PC+PF Sbjct: 21 AGFKIAVAVDIDRDAVRTYSANHRYTIIIQEDIRYIDYGDLLKYAGDVDVIIGSPPCEPF 80 Query: 80 SQA 82 + A Sbjct: 81 TAA 83 >gi|62946466|ref|YP_227670.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] gi|17134568|dbj|BAB77127.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120] Length = 253 Score = 67.5 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Query: 1 MLKITDLFCGIGGI-RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 M I LF GIGG+ + + EI+PYS + P T I DI Sbjct: 1 MKSILSLFSGIGGLCHHGIAAAGLSHKFQVKQFVEISPYSQSRLRHEQPQTPIHSDITTY 60 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 D++ G PCQ S AG Sbjct: 61 H-CHRGQFDIVAGGLPCQGTSNAG 83 >gi|134296266|ref|YP_001120001.1| DNA-cytosine methyltransferase [Burkholderia vietnamiensis G4] gi|134139423|gb|ABO55166.1| DNA-cytosine methyltransferase [Burkholderia vietnamiensis G4] Length = 384 Score = 67.5 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L + F G L ++++++ TY AN G I ++ Sbjct: 16 LSYLEFFAG-----SGLVAEGLRGLFRPVWANDLSEKKAATYTANHGARHFHLGSIENVE 70 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 +P D+ A FPCQ S AG Sbjct: 71 GAVLPVADMTWASFPCQDLSLAG 93 >gi|332306793|ref|YP_004434644.1| DNA-cytosine methyltransferase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174122|gb|AEE23376.1| DNA-cytosine methyltransferase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 729 Score = 67.5 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 8/85 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL----IFGDIAK 58 D F GIG + + L T H S + + Y+ NF DI + Sbjct: 4 TFVDFFAGIGLVEIGLTNTGWHH----LLSVDYSELKRDVYKLNFGKNHAEFYRCADIFE 59 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + ++P+ + A FPC S AG Sbjct: 60 VDGTEVPESFLAHASFPCTDVSSAG 84 >gi|298486609|ref|ZP_07004667.1| DNA methyltransferase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158824|gb|EFH99886.1| DNA methyltransferase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 589 Score = 67.5 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L+ + GI ++ +E + +E+ P+ ++P T GD+ K Sbjct: 10 LQYGSVCSGI----EAATAAWHPLGMEPVWFAEVEPFPSAVLAHHYPRTPNLGDMTKLGA 65 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 + I DVL+ G PCQ FS AG Sbjct: 66 LVLAGKIKAPDVLVGGTPCQAFSVAG 91 >gi|114675314|ref|XP_001163550.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) - human isoform 5 [Pan troglodytes] Length = 1280 Score = 67.5 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 803 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 858 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 859 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 894 >gi|323186482|gb|EFZ71828.1| DNA adenine methylase family protein [Escherichia coli 1357] Length = 754 Score = 67.5 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----D 63 GI + + + +EI P+ +P+ GD+ K+ + + Sbjct: 10 CSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLAHRWPHVANLGDMTKLAQKVLAGE 65 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 I DVL+ G PCQ FS AG Sbjct: 66 IESPDVLVGGTPCQAFSIAG 85 >gi|6684525|gb|AAF23609.1| DNA (cytosine-5)-methyltransferase [Homo sapiens] Length = 1280 Score = 67.5 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 803 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 858 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 859 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 894 >gi|300957407|ref|ZP_07169621.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 175-1] gi|300315842|gb|EFJ65626.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 175-1] Length = 343 Score = 67.5 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K DLFCG GG+ L+Q+ ++ +I ++ N I DI +K Sbjct: 3 IKAVDLFCGAGGLTHGLKQS----GIDVVAGYDIEETCRFAFEFNNNAVFINQDITVLKG 58 Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83 + I D +L PCQPFS G Sbjct: 59 EQILSHFKDSDVTILAGCAPCQPFSTYG 86 >gi|256821199|ref|YP_003142398.1| DNA-cytosine methyltransferase [Anaerococcus prevotii DSM 20548] gi|256799179|gb|ACV29833.1| DNA-cytosine methyltransferase [Anaerococcus prevotii DSM 20548] Length = 321 Score = 67.5 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI +LF GIG IR E EI+ VK+Y A + + K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNALYGEEYKAKSVVGYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS+ G Sbjct: 63 N-EKIDLIMHGSPCQDFSRIG 82 >gi|83859006|ref|ZP_00952527.1| C-5 cytosine-specific DNA methylase [Oceanicaulis alexandrii HTCC2633] gi|83852453|gb|EAP90306.1| C-5 cytosine-specific DNA methylase [Oceanicaulis alexandrii HTCC2633] Length = 363 Score = 67.5 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 10/84 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + DLFCG GG+ + + + + ++ N I D+AK+ Sbjct: 23 TVVDLFCGAGGLSHGF----HSEGFDIVGGIDTDEACRYAFEHNNDAPFIRRDVAKLTGP 78 Query: 63 DIP------DHDVLLAGFPCQPFS 80 +I VL+ PCQPFS Sbjct: 79 EIEGLFIPGKRRVLVGCAPCQPFS 102 >gi|320180750|gb|EFW55676.1| DNA-cytosine methyltransferase [Shigella boydii ATCC 9905] Length = 340 Score = 67.5 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 10/84 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K+ DLFCG GG+ L+ ++ ++ Y+ N + I DIAK+ + Sbjct: 4 KVIDLFCGAGGLTHGLQLA----GLDVVAGIDLEGECRFPYERNNKSKFIEQDIAKVTKE 59 Query: 63 DI------PDHDVLLAGFPCQPFS 80 ++ VL PCQPFS Sbjct: 60 ELLRLYGDASVKVLAGCAPCQPFS 83 >gi|254875583|ref|ZP_05248293.1| predicted protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254841582|gb|EET20018.1| predicted protein [Francisella tularensis subsp. tularensis MA00-2987] Length = 72 Score = 67.5 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 5/59 (8%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDI 64 F G GG+ L E+ + +++E + +TY+ N PNT++ I I + Sbjct: 13 FFSGAGGLDLGFERA----GFDIIWANEFDKEIWETYEKNHPNTILDRRSIVNIHESEF 67 >gi|307067513|ref|YP_003876479.1| site-specific DNA methylase [Streptococcus pneumoniae AP200] gi|306409050|gb|ADM84477.1| Site-specific DNA methylase [Streptococcus pneumoniae AP200] Length = 321 Score = 67.5 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI +LF GIG IR E EI+ VK+Y A + + + K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNALYGEDYKAKSVVRYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS+ G Sbjct: 63 N-EKIDLIMHGSPCQDFSRIG 82 >gi|297276085|ref|XP_001104704.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta] Length = 1280 Score = 67.5 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q + ++ E +P + ++ N P + +F Sbjct: 803 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNIL 858 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D ++L G PCQ FS Sbjct: 859 LKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 894 >gi|49476997|ref|YP_035183.1| modification methylase DdeI; cytosine-specific methyltransferase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328553|gb|AAT59199.1| modification methylase DdeI; possible cytosine-specific methyltransferase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 450 Score = 67.5 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 42/114 (36%), Gaps = 39/114 (34%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----------------- 47 DLF G GG+ L+ ++ + E+N + +TY AN Sbjct: 9 IDLFSGPGGLTTGLKLA----GIKPLIAVEMNNETAETYAANHHVDLLKLEEYLQHKNTY 64 Query: 48 --------PNTLIFGDIAKIKTQDIPD----------HDVLLAGFPCQPFSQAG 83 + LI GD+ ++ I + DV+ G PC+ +S AG Sbjct: 65 EHIFKPSDKSVLILGDVREVTDNLIREILLKRFSKESVDVITGGPPCESYSMAG 118 >gi|313886989|ref|ZP_07820689.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas asaccharolytica PR426713P-I] gi|312923515|gb|EFR34324.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas asaccharolytica PR426713P-I] Length = 349 Score = 67.5 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 10/83 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLFCGIGG+ L+ +E +++ Y+ N I+ DI + + Sbjct: 5 VVDLFCGIGGLSYGLKTA----GLEVLAGYDLDQTCAFAYEKNNNAQFIYKDIRSVCGGE 60 Query: 64 IP------DHDVLLAGFPCQPFS 80 + D VL PCQPFS Sbjct: 61 VSSLLDGVDIKVLAGCAPCQPFS 83 >gi|312964273|ref|ZP_07778577.1| DNA adenine methylase family protein [Escherichia coli 2362-75] gi|312290986|gb|EFR18860.1| DNA adenine methylase family protein [Escherichia coli 2362-75] Length = 672 Score = 67.5 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----D 63 GI + + + +EI P+ +P+ GD+ K+ + + Sbjct: 10 CSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLAHRWPHVANLGDMTKLAKKVLAGE 65 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 I DVL+ G PCQ FS AG Sbjct: 66 IESPDVLVGGTPCQAFSIAG 85 >gi|331646824|ref|ZP_08347925.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M605] gi|331044366|gb|EGI16495.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M605] Length = 862 Score = 67.5 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----D 63 GI + + + +EI P+ +P+ GD+ K+ + + Sbjct: 10 CSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLAHRWPHVANLGDMTKLAKKVLAGE 65 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 I DVL+ G PCQ FS AG Sbjct: 66 IESPDVLVGGTPCQAFSIAG 85 >gi|209875617|ref|XP_002139251.1| DNA (cytosine-5)-methyltransferase domain-containing protein [Cryptosporidium muris RN66] gi|209554857|gb|EEA04902.1| DNA (cytosine-5)-methyltransferase domain-containing protein [Cryptosporidium muris RN66] Length = 422 Score = 67.5 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 10/91 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQT-------FNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53 ML +T L GIGG+ L L+ +++ + E+N Y+ +F +T + Sbjct: 1 MLNLTSL-DGIGGLHLSLKYAIEKLVEHGQAIDIKVIKAFELNENCNNIYKRHFKDTQVC 59 Query: 54 -GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I + DIP ++ L G PCQPF++ G Sbjct: 60 TKSIESLNIDDIPKANIWLLG-PCQPFTRGG 89 >gi|323356693|ref|YP_004223089.1| site-specific DNA methylase [Microbacterium testaceum StLB037] gi|323273064|dbj|BAJ73209.1| site-specific DNA methylase [Microbacterium testaceum StLB037] Length = 360 Score = 67.1 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG GG+ L L+Q ++ +++P Y+ N I D+ +K D+ Sbjct: 11 IDLFCGAGGLSLGLKQA----GIDVVAGIDLDPACQYPYEQNLKAQFILKDVGDVKGVDL 66 Query: 65 ------PDHDVLLAGFPCQPFS 80 +L PCQPFS Sbjct: 67 QALWPEGKLRLLAGCAPCQPFS 88 >gi|320333452|ref|YP_004170163.1| DNA-cytosine methyltransferase [Deinococcus maricopensis DSM 21211] gi|319754741|gb|ADV66498.1| DNA-cytosine methyltransferase [Deinococcus maricopensis DSM 21211] Length = 326 Score = 67.1 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L ++ G GG L LE E E + ++ T + N P ++ GD+ Sbjct: 7 LTSLEICAGAGGQALGLEMA----GYEHAALVEFDAHACNTLRLNRPEWNVVEGDLRAFN 62 Query: 61 TQDIP---DHDVLLAGFPCQPFSQAG 83 +P +L G PCQPFS G Sbjct: 63 G--LPYRGQITLLAGGVPCQPFSHGG 86 >gi|119355930|ref|YP_910574.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM 266] gi|119353279|gb|ABL64150.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM 266] Length = 371 Score = 67.1 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 12/87 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIK 60 +++ D F G GG + + ++ + + ++ TYQ NF + D I + Sbjct: 12 IRVYDFFSGCGGTSVGFGRA----GIQHALAVDSCSDAISTYQKNFIGVPVITDPIETLN 67 Query: 61 TQDI-------PDHDVLLAGFPCQPFS 80 I P+ + PCQPF+ Sbjct: 68 VDRIQNYFSHNPEVKLFCGCAPCQPFT 94 >gi|8132067|gb|AAF73200.1|AF152342_1 DNA-(cytosine-5)-methyltransferase [Xiphophorus maculatus x Xiphophorus helleri] Length = 1503 Score = 67.1 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 + D+F G GG+ Q E ++ E+ + + ++ N P T +F Sbjct: 1025 YRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1081 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ Q +P D ++L G PCQ FS Sbjct: 1082 KLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 1116 >gi|312890850|ref|ZP_07750379.1| DNA-cytosine methyltransferase [Mucilaginibacter paludis DSM 18603] gi|311296633|gb|EFQ73773.1| DNA-cytosine methyltransferase [Mucilaginibacter paludis DSM 18603] Length = 336 Score = 67.1 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 5/84 (5%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 + ++ G GG + L+Q E E+ + +T + N P +I D+ Sbjct: 13 IYTSIEICAGAGGQAIGLDQA----GFEHLALVELENLACQTLRFNKPQWNVIEKDVRNF 68 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 D+ G PC PFS AG Sbjct: 69 SATKYEGVDLFAGGVPCPPFSIAG 92 >gi|91784577|ref|YP_559783.1| C-5 cytosine-specific DNA methylase [Burkholderia xenovorans LB400] gi|40019222|emb|CAE92946.1| putative DNA methyltransferase [Pseudomonas putida] gi|91688531|gb|ABE31731.1| C-5 cytosine-specific DNA methylase [Burkholderia xenovorans LB400] Length = 533 Score = 67.1 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----KIKTQD 63 GI + + +E + +EI P+ +P+ GD+ +++ Sbjct: 24 CSGI----EAVSLAWQPLGLEAAWFAEIEPFPSAVLAHRYPHVPNLGDMTAIARQVRAGT 79 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+L+ G PCQ FS AG Sbjct: 80 VPAPDILVGGTPCQSFSVAG 99 >gi|295395397|ref|ZP_06805596.1| modification methylase NaeI [Brevibacterium mcbrellneri ATCC 49030] gi|294971719|gb|EFG47595.1| modification methylase NaeI [Brevibacterium mcbrellneri ATCC 49030] Length = 355 Score = 67.1 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI- 59 L ++ G GG L LEQ E EI+ +V T + N P + D+ Sbjct: 3 LTSVEICAGAGGQALGLEQA----GFEHTCLVEIDSDAVATLRMNRPRWNVHQADLLNWQ 58 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + + D+L G PC PFS AG Sbjct: 59 PPKSLERPDLLAGGVPCPPFSLAG 82 >gi|114330146|ref|YP_746368.1| DNA-cytosine methyltransferase [Nitrosomonas eutropha C91] gi|114307160|gb|ABI58403.1| DNA-cytosine methyltransferase [Nitrosomonas eutropha C91] Length = 497 Score = 67.1 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ + GI + + + + + SEI P+ +P+ GD+ +I Sbjct: 10 LQYGSVCSGI----EAVSLAWQPQGPQAAWFSEIEPFPCAVLAHRYPDVPNLGDMTQIAE 65 Query: 62 QDIPDH----DVLLAGFPCQPFSQAG 83 Q D+L+ G PCQ FS AG Sbjct: 66 QVRAGLVVAPDILVGGTPCQTFSIAG 91 >gi|256828696|ref|YP_003157424.1| C-5 cytosine-specific DNA methylase [Desulfomicrobium baculatum DSM 4028] gi|256577872|gb|ACU89008.1| C-5 cytosine-specific DNA methylase [Desulfomicrobium baculatum DSM 4028] Length = 397 Score = 67.1 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 22/100 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN---PYS-------VKTYQANFPNTL 51 + DLF G GG+ F H + +++ P + TYQ N Sbjct: 4 FTVIDLFSGAGGMSYGF---FKHEAFKIIAAADAELGKPSAGNGKLQCNTTYQKNIGINP 60 Query: 52 IFGDIAKIKTQDIP---------DHDVLLAGFPCQPFSQA 82 + D++KI +++ ++L PC FS+A Sbjct: 61 VNCDLSKIDPKNLKKILKLNNNDKVNILSCCPPCTGFSRA 100 >gi|223995915|ref|XP_002287631.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220976747|gb|EED95074.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 319 Score = 67.1 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 27/83 (32%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++F GIGG + LE + I GDI ++ Sbjct: 194 FSYAEMFAGIGGFGVALEALGG--------------------------SWIHGDIYEVPD 227 Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83 P D D+L+AGFPCQPFS G Sbjct: 228 SAFPKDLDLLVAGFPCQPFSTLG 250 >gi|330991509|ref|ZP_08315460.1| Modification methylase DdeI [Gluconacetobacter sp. SXCC-1] gi|329761528|gb|EGG78021.1| Modification methylase DdeI [Gluconacetobacter sp. SXCC-1] Length = 449 Score = 67.1 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 33/98 (33%), Gaps = 23/98 (23%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---------- 54 DLF G GG+ L L E +P++ ++Y N + G Sbjct: 35 IDLFAGCGGMSLGLHMA----GFRGIMGIEAHPHAFESYCHNLIDNPSIGMDWPAWLPLG 90 Query: 55 --DIAKIKTQDIP-------DHDVLLAGFPCQPFSQAG 83 ++ + D+L G PCQ FS G Sbjct: 91 PNNVVDLAANYTSQLAAMAGSVDLLAGGPPCQGFSTNG 128 >gi|134046699|ref|YP_001098184.1| DNA-cytosine methyltransferase [Methanococcus maripaludis C5] gi|132664324|gb|ABO35970.1| DNA-cytosine methyltransferase [Methanococcus maripaludis C5] Length = 366 Score = 67.1 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 39/132 (29%), Gaps = 55/132 (41%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49 + DLFCG GG + + + E++ + +Y N+ Sbjct: 12 MNFIDLFCGCGGFSRGFVE----MGFKPLLAIELDENAANSYALNYNGMVFEKKLNEFLE 67 Query: 50 ------------------------------TLIFGDIAKIKTQDI---------PDHDVL 70 +I DI +I ++ I D++ Sbjct: 68 KEIYFKLEDFLVQNDIEDFKKSNNYENLNPVVINEDIREINSKYITNKIKNTSDSKIDLV 127 Query: 71 LAGFPCQPFSQA 82 + G PC+ ++ A Sbjct: 128 IGGPPCEGYTGA 139 >gi|124486003|ref|YP_001030619.1| hypothetical protein Mlab_1183 [Methanocorpusculum labreanum Z] gi|124363544|gb|ABN07352.1| DNA-cytosine methyltransferase [Methanocorpusculum labreanum Z] Length = 352 Score = 66.7 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 14/86 (16%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT--- 61 D FCG GGI L ++ +I+P +TY+ N N + DI I Sbjct: 12 IDFFCGGGGITKGLSDA----GIKVLGGIDISPDLKRTYEENNHNKFVNFDIRTISGSNI 67 Query: 62 -QDIPDHD------VLLAGFPCQPFS 80 ++ P+ + +L PCQPFS Sbjct: 68 YKEFPEIEGDEDNLLLAGCAPCQPFS 93 >gi|157165013|ref|YP_001467403.1| glutathionylspermidine synthase family protein [Campylobacter concisus 13826] gi|112801055|gb|EAT98399.1| conserved hypothetical protein [Campylobacter concisus 13826] gi|158605014|gb|ABW74816.1| conserved hypothetical protein [Campylobacter concisus 13826] Length = 203 Score = 66.7 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +KI +LF GIGG RL + V + E +P K Y +PN +I GD Sbjct: 1 MKILNLFAGIGGNRLLWDNVLPGVKVT---AVEFDPEIAKAYAKRYPNDNVIVGDAWDYA 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81 ++ D D + A PCQ S+ Sbjct: 58 AKNYLDFDFIWASPPCQTHSR 78 >gi|296139305|ref|YP_003646548.1| DNA-cytosine methyltransferase [Tsukamurella paurometabola DSM 20162] gi|296027439|gb|ADG78209.1| DNA-cytosine methyltransferase [Tsukamurella paurometabola DSM 20162] Length = 385 Score = 66.7 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 9/86 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAK 58 + + F GIG + LE+ +++ +S++I+P Y+ +F + I GD+A Sbjct: 14 RAAEFFAGIGLAGIGLEKA----DIKVAWSNDISPVKYALYEKHFGEREGHRYIVGDLAT 69 Query: 59 IKTQDIP-DHDVLLAGFPCQPFSQAG 83 ++ P D DV A FPC S AG Sbjct: 70 LEASQDPIDIDVAWASFPCTDLSVAG 95 >gi|294637303|ref|ZP_06715601.1| DNA (cytosine-5-)-methyltransferase [Edwardsiella tarda ATCC 23685] gi|291089511|gb|EFE22072.1| DNA (cytosine-5-)-methyltransferase [Edwardsiella tarda ATCC 23685] Length = 722 Score = 66.7 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ + GI + + +EI + +P+ + GD+ KI Sbjct: 1 MRYGSVCSGI----EAASVAWEPLGWTPAWFAEIEEFPSAVLAQRWPSVVNLGDMTKIAA 56 Query: 62 Q----DIPDHDVLLAGFPCQPFSQAG 83 D+ DVL+ G PCQ FS AG Sbjct: 57 AVRAGDVEAPDVLVGGTPCQAFSVAG 82 >gi|26990617|ref|NP_746042.1| DNA-cytosine methyltransferase [Pseudomonas putida KT2440] gi|24985601|gb|AAN69506.1|AE016584_14 DNA-cytosine methyltransferase [Pseudomonas putida KT2440] Length = 553 Score = 66.7 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + GI ++ + +EI P+ ++P T GD+ ++ Sbjct: 3 ITYGSVCSGI----EAATVAWHPLGWRAEWYAEIEPFPCAVLAHHYPATPNHGDMTRLAA 58 Query: 62 Q----DIPDHDVLLAGFPCQPFSQAG 83 IP +VL+ G PCQ FS AG Sbjct: 59 MVLSGKIPAPEVLVGGTPCQAFSVAG 84 >gi|86131659|ref|ZP_01050257.1| DNA (cytosine-5-)-methyltransferase [Dokdonia donghaensis MED134] gi|85818104|gb|EAQ39272.1| DNA (cytosine-5-)-methyltransferase [Dokdonia donghaensis MED134] Length = 409 Score = 66.7 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 36/128 (28%), Gaps = 50/128 (39%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-------YQAN-------- 46 L DLF G GG+ + + EI+ + T ++ N Sbjct: 4 LNFIDLFSGAGGLSEGFIKA----GFKPIAHVEIDKKACDTLETRLIYHKLNSENKTEKY 59 Query: 47 ----------------FPNTLIFGDIAKIKT---------QDI------PDHDVLLAGFP 75 F N+ + + I I D+++ G P Sbjct: 60 YDYISEKITREEFIKTFSNSELSNSVINIPIGGKNNKIIFDKIDTLAKGKQIDLIIGGPP 119 Query: 76 CQPFSQAG 83 CQ +S G Sbjct: 120 CQAYSLVG 127 >gi|253991772|ref|YP_003043128.1| cytosine-specific DNA methyltransferase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638547|emb|CAR67168.1| cytosine-specific dna methyltransferase (ec 2.1.1.37) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783222|emb|CAQ86387.1| cytosine-specific DNA methyltransferase [Photorhabdus asymbiotica] Length = 167 Score = 66.7 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 ++ + GI + + + + SE + Q ++P GD+A+I Sbjct: 3 MRFGSVCSGI----EAVSVAWEPLGMSPAWFSETEKFPSAVLQYHWPYVRNLGDMAEIPA 58 Query: 61 --TQDIPDH-DVLLAGFPCQPFSQAG 83 T+++ D D+L+ G PCQ FS AG Sbjct: 59 MITENLADALDILVGGTPCQAFSIAG 84 >gi|33323568|gb|AAQ07538.1|AF503408_62 Dam [Enterobacteria phage P7] Length = 672 Score = 66.7 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----IKTQD 63 GI + + + +EI P+ +P+ GD+ K ++ + Sbjct: 10 CSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLAHRWPHVANLGDMTKLAQKVQAGE 65 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 I DVL+ G PCQ FS AG Sbjct: 66 IEAPDVLVGGTPCQAFSIAG 85 >gi|270293678|ref|ZP_06199880.1| cytosine-specific methyltransferase [Bacteroides sp. D20] gi|270275145|gb|EFA21005.1| cytosine-specific methyltransferase [Bacteroides sp. D20] Length = 361 Score = 66.7 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Query: 25 RNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPDHD----VLLAGFPCQPF 79 ++ ++ E+NP++ K+++ N +I GDI +K D + D +++ G PCQ F Sbjct: 22 AGIKVRYAIEVNPHAAKSFELNHKGAKVICGDIRDVKATDFLNKDEEVFIIMGGPPCQGF 81 Query: 80 SQ 81 S Sbjct: 82 SM 83 >gi|153933427|ref|YP_001385281.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|153933974|ref|YP_001384769.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|153935154|ref|YP_001386762.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|153935271|ref|YP_001386815.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|153937696|ref|YP_001388073.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|152929471|gb|ABS34971.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|152930018|gb|ABS35518.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. ATCC 19397] gi|152931068|gb|ABS36567.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|152931185|gb|ABS36684.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] gi|152933610|gb|ABS39109.1| DNA-cytosine methyltransferase family protein [Clostridium botulinum A str. Hall] Length = 315 Score = 66.7 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++I +LF GIG R L V+ EI+ +V++Y A F L + + + Sbjct: 1 MIQILELFGGIGAPRKALINLG--VPVKAIDYVEIDEKAVRSYNAIFHKDLAYKTQSVVG 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 P D+L+ G PCQ FS AG Sbjct: 59 YNLKP--DILIHGSPCQDFSIAG 79 >gi|51245886|ref|YP_065770.1| modification methylase [Desulfotalea psychrophila LSv54] gi|50876923|emb|CAG36763.1| probable modification methylase [Desulfotalea psychrophila LSv54] Length = 360 Score = 66.7 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 17/99 (17%) Query: 2 LKI--TDLFCGIGGIRLDLEQTF------NHRNVECF--FSSEINPYSVKTYQANFPN-- 49 +K +LFCG GGI L + N+ + ++++ + + +TY N N Sbjct: 1 MKFELAELFCGPGGIALGAQLAGVVYNNRNNESFSIAPSWATDYDEATCRTYALNIHNSN 60 Query: 50 -----TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 T++ D+ ++ + + L GFPC FS G Sbjct: 61 ELDLDTVVCQDVRELDIEALRPRQALAFGFPCNDFSSVG 99 >gi|2956677|emb|CAB09661.1| DNA-C5-methyltransferase [Ascobolus immersus] Length = 1336 Score = 66.7 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 29/105 (27%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54 LK D+F G GG+ L L+ + V+ ++ E P + T NFP+ +F Sbjct: 784 LKGLDIFAGCGGLTLGLDLSGA---VDTKWAIEFAPSAANTLALNFPDAQVFNQCANVLL 840 Query: 55 ------------DIA-KIKTQDIPD------HDVLLAGFPCQPFS 80 DI ++ + +PD D + G PCQ FS Sbjct: 841 SRAIQSEDEGSLDIEYDLQGRVLPDLPKKGEVDFIYGGPPCQGFS 885 >gi|83309461|ref|YP_419725.1| site-specific DNA methylase [Magnetospirillum magneticum AMB-1] gi|82944302|dbj|BAE49166.1| Site-specific DNA methylase [Magnetospirillum magneticum AMB-1] Length = 517 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Query: 21 TFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPF 79 + F +EI P+ ++P GD+ I + DVL+ G PCQ F Sbjct: 40 AWEPLGWRPAFFAEIEPFPSAVLAHHYPAVPNLGDMTAIDGRAWRGKIDVLVGGTPCQAF 99 Query: 80 SQAG 83 S AG Sbjct: 100 SVAG 103 >gi|145250405|ref|XP_001396716.1| C-5 cytosine methyltransferase DmtA [Aspergillus niger CBS 513.88] gi|134082235|emb|CAL00990.1| unnamed protein product [Aspergillus niger] Length = 613 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 D FCG GG+ + + ++ + + +++ TY+ NF + D+ Sbjct: 306 YTFGDGFCGAGGVSCGALKA----GLRPTWAFDNSRHAINTYRLNFRDAECEDSDVFTFL 361 Query: 61 TQD--IPDHDVLLAGFPCQPFSQA 82 T D DV PCQ FS A Sbjct: 362 TNDYAFLKVDVTHGSPPCQTFSPA 385 >gi|226945654|ref|YP_002800727.1| C-5 cytosine-specific DNA methylase [Azotobacter vinelandii DJ] gi|226720581|gb|ACO79752.1| C-5 cytosine-specific DNA methylase [Azotobacter vinelandii DJ] Length = 501 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 36/100 (36%), Gaps = 23/100 (23%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTL-------IFG 54 K+ +L G GG+ L L+ E E N + TY NF P I Sbjct: 30 KVLELCSGCGGLSLGLKTA----GFELAAHVESNDEANATYALNFAPENPAQTKQWAISR 85 Query: 55 D---------IAKIKTQDIPD--HDVLLAGFPCQPFSQAG 83 D I P DVL AG PCQ F++ G Sbjct: 86 DMVAQSMSDLITDFGLAGGPREAFDVLAAGLPCQAFARIG 125 >gi|30523050|gb|AAP31838.1| AsiSI methylase [Arthrobacter sp. S] Length = 390 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAKIKT 61 +LF G GG+ L + + N S+ Y N + + D++ ++ Sbjct: 7 VELFAGCGGLSTGLLDA----GYDVRLGVDNNAPSLVAYDYNHAYRGSKSLLRDVSALRG 62 Query: 62 QDIPDH------DVLLAGFPCQPFSQAG 83 ++ + DVL G PCQPFS AG Sbjct: 63 PELLEAAGVDSIDVLSGGPPCQPFSIAG 90 >gi|156358701|ref|XP_001624654.1| predicted protein [Nematostella vectensis] gi|156211447|gb|EDO32554.1| predicted protein [Nematostella vectensis] Length = 226 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 9/87 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ + + GIGG+ L+ +N E + EI+ + Y NFP T I+ I+ Sbjct: 7 FRVVEFYSGIGGMHYALK--GCKKNAEVVAALEISTTANTVYGHNFPTTKIWN--CNIEV 62 Query: 62 QDIPDHDV-----LLAGFPCQPFSQAG 83 ++ + ++ PCQP++ G Sbjct: 63 CELCNVTTMPAIYMVMSPPCQPYTWVG 89 >gi|255081819|ref|XP_002508128.1| DNA methyltransferase [Micromonas sp. RCC299] gi|226523404|gb|ACO69386.1| DNA methyltransferase [Micromonas sp. RCC299] Length = 404 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ + +CG+GG+ L + + + + +INP Y+ NF +I + Sbjct: 31 LRAVEFYCGVGGLHYSLLRA--RPDAKVVAAFDINPNGNDVYEHNFGVRPSQKNIYGLPV 88 Query: 62 QDIPDHD--VLLAGFPCQPFSQAG 83 D + L PCQPF++ G Sbjct: 89 ASFDRLDAGLWLLSPPCQPFTRQG 112 >gi|56385094|gb|AAV85978.1| 5' cytosine DNA methyl transferase-like protein [Pristionchus pacificus] Length = 313 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKT 61 K+ + +CGIGGI L++T + +IN + Y+ NFP+T + +I + Sbjct: 11 KVLEFYCGIGGIHFALKRT--SIPFHIAAAFDINTTTNVIYRHNFPSTKLKESNIQGVSV 68 Query: 62 QDIPD--HDVLLAGFPCQPFSQAG 83 + ++ PCQPF+ G Sbjct: 69 SSLDKLGAELWTMSPPCQPFTLKG 92 >gi|294629552|ref|ZP_06708112.1| DNA methylase [Streptomyces sp. e14] gi|292832885|gb|EFF91234.1| DNA methylase [Streptomyces sp. e14] Length = 436 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 12/85 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIKTQ 62 + DLF G GG+ + + + E + + T Y A + D++ ++ + Sbjct: 16 VLDLFAGPGGLDV----AGHRLGIPSLG-IEWDRSACLTRYAA--GLDTLHADVSAVRRE 68 Query: 63 DI----PDHDVLLAGFPCQPFSQAG 83 P+ +VL G PCQ +S AG Sbjct: 69 SFESLPPEINVLAGGPPCQTYSVAG 93 >gi|325849320|ref|ZP_08170737.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480182|gb|EGC83251.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 321 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI +LF GIG IR E EI+ VK+Y A + + K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNALYGEDYKAKSVVGYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS+ G Sbjct: 63 N-EKIDLIMHGSPCQDFSRIG 82 >gi|307191164|gb|EFN74862.1| DNA (cytosine-5)-methyltransferase 3A [Camponotus floridanus] Length = 704 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 8/85 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFN-HRNVECFFSSEINPYSVKTYQANFPNTLIF----GDI 56 +++ LF G + N V+ +++SEI+ ++ A+F + + + DI Sbjct: 401 IRVLSLFDG---LSTGFLVLLNLGIVVDVYYASEIDKNALTISSAHFGDRITYLGDVRDI 457 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQ 81 K K Q+I D+L+ G PC S Sbjct: 458 TKEKIQEIAPIDLLIGGSPCNDLSL 482 >gi|253571497|ref|ZP_04848903.1| DNA-cytosine methyltransferase [Bacteroides sp. 1_1_6] gi|251838705|gb|EES66790.1| DNA-cytosine methyltransferase [Bacteroides sp. 1_1_6] Length = 436 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 38/130 (29%), Gaps = 52/130 (40%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV------------------KTY 43 + DLF G GG+ + E E++ Y+ + Y Sbjct: 3 YRFIDLFAGAGGLSEGFIRA----GYEPIAHIEMDHYACDSLKTRAAFHYLKENGKLEIY 58 Query: 44 QANFPNTLIFGD----------------IAK-IKTQDIPD-------------HDVLLAG 73 + N D I + I + +P D+++ G Sbjct: 59 EEYLKNKKEKTDGSWLWNQVPKSVIDSVIQEAIGKETLPSLFERVDKLCNGKPVDMIIGG 118 Query: 74 FPCQPFSQAG 83 PCQ +S AG Sbjct: 119 PPCQAYSVAG 128 >gi|256421593|ref|YP_003122246.1| DNA-cytosine methyltransferase [Chitinophaga pinensis DSM 2588] gi|256036501|gb|ACU60045.1| DNA-cytosine methyltransferase [Chitinophaga pinensis DSM 2588] Length = 423 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 38/127 (29%), Gaps = 49/127 (38%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT--------YQANFPN---- 49 LK DLF G GG+ + E EI + T Y N Sbjct: 6 LKYIDLFAGAGGLSEGFIRA----GFEPVAHVEIEEAACFTLKTRTAYHYLKNKGEYDTY 61 Query: 50 -TLIFGDIA-----KIKTQDIPD---------------------------HDVLLAGFPC 76 + + G+I+ K ++ D D+++ G PC Sbjct: 62 VSYLKGEISRAELYKAVPSELMDAIINLPIGAEHNSAIHKAIEKQLLGSKVDLIIGGPPC 121 Query: 77 QPFSQAG 83 Q +S G Sbjct: 122 QAYSVVG 128 >gi|281420198|ref|ZP_06251197.1| modification methylase HphIA [Prevotella copri DSM 18205] gi|281405693|gb|EFB36373.1| modification methylase HphIA [Prevotella copri DSM 18205] Length = 379 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 33/89 (37%), Gaps = 12/89 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + D FC GG+ L +IN S+KTY+ N+ ++ DI I Sbjct: 32 FDVIDFFCCGGGMSLGF--ASLQEYFRIIGGVDINSTSLKTYELNYGTPVMNADITTISP 89 Query: 62 QD--------IPDHD--VLLAGFPCQPFS 80 I V++ PCQ FS Sbjct: 90 NSNVVQQTFKINKKRPLVVIGCAPCQGFS 118 >gi|209978474|gb|ACJ04671.1| DNA methyltransferase 1 [Carassius auratus] Length = 1503 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1026 LRTLDVFSGCGGLSEGFHQAGIS---ETHWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1081 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ Q +P D ++L G PCQ FS Sbjct: 1082 LKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 1117 >gi|190338613|gb|AAI63894.1| Dnmt1 protein [Danio rerio] Length = 1500 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1023 LRTLDVFSGCGGLSEGFHQAGIS---ETHWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1078 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ Q +P D ++L G PCQ FS Sbjct: 1079 LKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 1114 >gi|190337769|gb|AAI63893.1| Dnmt1 protein [Danio rerio] Length = 1500 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1023 LRTLDVFSGCGGLSEGFHQAGIS---ETHWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1078 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ Q +P D ++L G PCQ FS Sbjct: 1079 LKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 1114 >gi|3818628|gb|AAC69603.1| DNA methyltransferase [Danio rerio] Length = 700 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 223 LRTLDVFSGCGGLSEGFHQAGIS---ETHWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 278 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ Q +P D ++L G PCQ FS Sbjct: 279 LKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 314 >gi|40538748|ref|NP_571264.1| DNA (cytosine-5)-methyltransferase 1 [Danio rerio] gi|19263095|gb|AAL86596.1|AF483203_1 DNA (cytosine-5)-methyltransferase [Danio rerio] Length = 1499 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P T +F Sbjct: 1022 LRTLDVFSGCGGLSEGFHQAGIS---ETHWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVL 1077 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ Q +P D ++L G PCQ FS Sbjct: 1078 LKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 1113 >gi|296414683|ref|XP_002837027.1| hypothetical protein [Tuber melanosporum Mel28] gi|295632876|emb|CAZ81218.1| unnamed protein product [Tuber melanosporum] Length = 939 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 17/95 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIAK 58 +K DLFCG G LE+ ++ ++ +I+ ++ TY+AN N L G + Sbjct: 534 MKGMDLFCGGGSFGRGLEEGGV---IDMKWAVDIDVPAIATYRANLRNQDTALYLGSVNN 590 Query: 59 IKTQDIP-----------DHDVLLAGFPCQPFSQA 82 I + D + AG PCQ FS A Sbjct: 591 YMEDAIRGKYSHLVAHPDEVDFISAGSPCQGFSNA 625 >gi|313890914|ref|ZP_07824537.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus SPIN 20026] gi|313120711|gb|EFR43827.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus SPIN 20026] Length = 316 Score = 66.3 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI +LF GIG IR E EI+ VK+Y A + + + K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNALYGESYKPKSVVGYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS+ G Sbjct: 63 N-EKIDLIMHGSPCQDFSRIG 82 >gi|303236370|ref|ZP_07322960.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] gi|302483428|gb|EFL46433.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] Length = 415 Score = 65.9 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 31/107 (28%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ---------ANFPNTLIFGD 55 +LF G GG+ Q + + C E Y +T + N N +I D Sbjct: 8 IELFAGCGGLLDGFLQQGKYDTLACV---EWEQYPCQTLENRLLNKWHHRNANNEVIRFD 64 Query: 56 IAK-------IKTQDI------------PDHDVLLAGFPCQPFSQAG 83 I + + D+++ G PCQ +S AG Sbjct: 65 IQRTDELINGFDDSEYGKNEGLDKLIGGKKVDIIVGGPPCQAYSLAG 111 >gi|317505386|ref|ZP_07963311.1| DNA (cytosine-5-)-methyltransferase [Prevotella salivae DSM 15606] gi|315663493|gb|EFV03235.1| DNA (cytosine-5-)-methyltransferase [Prevotella salivae DSM 15606] Length = 436 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 38/130 (29%), Gaps = 52/130 (40%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV------------------KTY 43 + DLF G GG+ + E E++ Y+ + Y Sbjct: 3 YRFIDLFAGAGGLSEGFIRA----GYEPIAHIEMDHYACDSLKTRAAFHYLKENGKLEIY 58 Query: 44 QANFPNTLIFGD----------------IAK-IKTQDIPD-------------HDVLLAG 73 + N D I + I + +P D+++ G Sbjct: 59 EEYLKNKKEKTDGSWLWNKVPKSVIDSVIQEAIGKETLPSLFERVDKLCNGTPVDMIIGG 118 Query: 74 FPCQPFSQAG 83 PCQ +S AG Sbjct: 119 PPCQAYSVAG 128 >gi|322510858|gb|ADX06172.1| putative C-5 site-specific DNA methyltransferase [Organic Lake phycodnavirus 1] Length = 327 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 41/117 (35%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52 +K LF G+GG L + Q E +E + S+++++ NFP + + Sbjct: 1 MKCISLFSGMGGDTLGMIQA----GCEVIAFNEYDKASIQSHKMNFPYSELICASVKERE 56 Query: 53 -------------------FGDIAKIKTQDIPD-------HDVLLAGFPCQPFSQAG 83 + D+ I Q+I D D++ AG PCQ FS G Sbjct: 57 KYKESLTGTKKENHKAMKDYDDVYNI--QNIQDDVLGSYKADLIFAGHPCQGFSNGG 111 >gi|313888225|ref|ZP_07821897.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845756|gb|EFR33145.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 321 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI +LF GIG IR E EI+ VK+Y A + + K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNALYGEEYKPKSVVGYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS+ G Sbjct: 63 N-EKIDLVMHGSPCQDFSRIG 82 >gi|302654293|ref|XP_003018954.1| C-5 cytosine methyltransferase DmtA [Trichophyton verrucosum HKI 0517] gi|291182644|gb|EFE38309.1| C-5 cytosine methyltransferase DmtA [Trichophyton verrucosum HKI 0517] Length = 582 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 D FCG GG+ +Q ++ ++ + + ++ +Y+ANFP+ L ++A+ Sbjct: 276 YTFGDGFCGAGGVSRGAQQA----GLKLSWAFDKSESAINSYRANFPSCLAEHSEVAQFL 331 Query: 61 TQDIPD---HDVLLAGFPCQPFSQA 82 T +P DV+ PCQPFS A Sbjct: 332 TS-LPRELLVDVMHVSPPCQPFSPA 355 >gi|302504717|ref|XP_003014317.1| C-5 cytosine methyltransferase DmtA [Arthroderma benhamiae CBS 112371] gi|291177885|gb|EFE33677.1| C-5 cytosine methyltransferase DmtA [Arthroderma benhamiae CBS 112371] Length = 644 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 D FCG GG+ +Q ++ ++ + + ++ +Y+ANFP+ L ++A+ Sbjct: 277 YTFGDGFCGAGGVSRGAQQA----GLKLSWAFDKSESAINSYRANFPSCLAEHSEVAQFL 332 Query: 61 TQDIPD---HDVLLAGFPCQPFSQA 82 T +P DV+ PCQPFS A Sbjct: 333 TS-LPRELLVDVMHVSPPCQPFSPA 356 >gi|182677759|ref|YP_001831905.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica ATCC 9039] gi|182633642|gb|ACB94416.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica ATCC 9039] Length = 488 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 38/102 (37%), Gaps = 32/102 (31%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL------IFGDI----- 56 FCGIGG+ + E F++++ P ++ + NF T GDI Sbjct: 40 FCGIGGLSRGF----HSLGFEPKFANDVWPLALYNFLMNFDATYAATSGTHHGDILGLVG 95 Query: 57 --AKIKTQDI---------------PDHDVLLAGFPCQPFSQ 81 I DI + DVLL G PCQ FS Sbjct: 96 SVEDISISDILPKISSSSGEGSLKVGEIDVLLGGPPCQGFSL 137 >gi|163855343|ref|YP_001629641.1| putative DNA-cytosine methyltransferase [Bordetella petrii DSM 12804] gi|163259071|emb|CAP41370.1| putative DNA-cytosine methyltransferase [Bordetella petrii] Length = 197 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD---I-AKIKTQD 63 GI + +E + +EI P+ +P GD I +++ Sbjct: 20 CSGI----EAASLAWQPLGLEAAWFAEIEPFPSAVLAHRYPRVPNLGDMAAIARQVRAGT 75 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+L+ G PCQ FS AG Sbjct: 76 VPAPDILVGGTPCQSFSVAG 95 >gi|121594541|ref|YP_986437.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42] gi|120606621|gb|ABM42361.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42] Length = 366 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG GG L F + +++P Y+AN + DI+K+ ++ Sbjct: 26 VDLFCGAGG----LTHGFVLEGLPVVAGIDLDPACRFPYEANNQARFVERDISKVTASEL 81 Query: 65 P----DHD--VLLAGFPCQPFS 80 D D +L PCQPFS Sbjct: 82 KALFGDADLTILAGCAPCQPFS 103 >gi|209883965|ref|YP_002287822.1| site-specific DNA methylase [Oligotropha carboxidovorans OM5] gi|209872161|gb|ACI91957.1| site-specific DNA methylase [Oligotropha carboxidovorans OM5] Length = 358 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 8/85 (9%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDIAKI 59 L G GG+ L + E + Y+ A + ++ DIA Sbjct: 23 LSLCSGAGGLDLGV--AIACPEYRAMGYVERDAYAAAILVARMEDAALDHAPVWDDIATF 80 Query: 60 KTQDIPD-HDVLLAGFPCQPFSQAG 83 + D++ AG+PCQPFS AG Sbjct: 81 DGRPWRGTIDIVTAGYPCQPFSVAG 105 >gi|302380785|ref|ZP_07269249.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna ACS-171-V-Col3] gi|302311385|gb|EFK93402.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna ACS-171-V-Col3] Length = 321 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI +LF GIG IR E EI+ VK+Y A + + K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNALYGENYKPKSVVGYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS+ G Sbjct: 63 N-EKIDLIMHGSPCQDFSRIG 82 >gi|296108892|ref|YP_003615841.1| DNA-cytosine methyltransferase [Methanocaldococcus infernus ME] gi|295433706|gb|ADG12877.1| DNA-cytosine methyltransferase [Methanocaldococcus infernus ME] Length = 361 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 61/138 (44%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------- 50 + + DLF G GG + E + E+N + +Y NF Sbjct: 1 MNLIDLFSGCGGFSRGFSE----LGFEPLLAIELNEDAAFSYALNFNGEVYEKTPEGYKV 56 Query: 51 ----------------------------------------LIFGDIAKIKTQDI------ 64 ++ DI ++ + DI Sbjct: 57 KEMKGYVGEYSFKIPRDEESVKWLRRLGTLNETTEKFSPIVLNEDIREVHSLDIKKLIKN 116 Query: 65 PDHDVLLAGFPCQPFSQA 82 DV++ G PC+ ++ A Sbjct: 117 KKVDVIIGGPPCEGYTGA 134 >gi|169824652|ref|YP_001692263.1| cytosine-specific DNA-methyltransferase [Finegoldia magna ATCC 29328] gi|297588631|ref|ZP_06947274.1| type II restriction-modification system methylation subunit [Finegoldia magna ATCC 53516] gi|304440076|ref|ZP_07399968.1| type II restriction-modification system methylation subunit [Peptoniphilus duerdenii ATCC BAA-1640] gi|167831457|dbj|BAG08373.1| cytosine-specific DNA-methyltransferase [Finegoldia magna ATCC 29328] gi|297574004|gb|EFH92725.1| type II restriction-modification system methylation subunit [Finegoldia magna ATCC 53516] gi|304371443|gb|EFM25057.1| type II restriction-modification system methylation subunit [Peptoniphilus duerdenii ATCC BAA-1640] Length = 320 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI +LF GIG IR + E EI+ VK+Y A + + K Sbjct: 5 KILELFGGIGAIRKAFINL--KISYEVVDYVEIDKACVKSYNALYGEAYKPKSVVGYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS+ G Sbjct: 63 N-EKIDLIMHGSPCQDFSRIG 82 >gi|300791025|ref|YP_003771316.1| DNA (cytosine-5-)-methyltransferase [Amycolatopsis mediterranei U32] gi|299800539|gb|ADJ50914.1| DNA (cytosine-5-)-methyltransferase [Amycolatopsis mediterranei U32] Length = 435 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 17/93 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------LIF 53 + +L G GG L LE+ + + E++ + T Q N P + Sbjct: 12 VVELCAGAGGQALGLERA----GFKHRLAVELDSNAFTTLQTNIPGKIEINEEEREIVQQ 67 Query: 54 GDIAK---IKTQDIPDHDVLLAGFPCQPFSQAG 83 GD+A +D + +L G PC PF+ AG Sbjct: 68 GDVADPAVFNPEDHREVALLAGGVPCPPFTIAG 100 >gi|119509253|ref|ZP_01628403.1| DNA-cytosine methyltransferase family protein [Nodularia spumigena CCY9414] gi|119466095|gb|EAW46982.1| DNA-cytosine methyltransferase family protein [Nodularia spumigena CCY9414] Length = 418 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 35/97 (36%), Gaps = 24/97 (24%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF------GDIA 57 I F G GG+ + E + S EIN +T + N PN + GD+ Sbjct: 70 IVSFFSGAGGLDIGFEYA----GFKHLASIEINSIFCQTIRLNRPNWFVVGPPDYSGDVK 125 Query: 58 KIKTQDI------------PDHDVLLAGFPCQPFSQA 82 +I P + G PCQPFS A Sbjct: 126 --NRDEIFTILKVMLGIPTPFEGIFTGGPPCQPFSIA 160 >gi|261403447|ref|YP_003247671.1| DNA-cytosine methyltransferase [Methanocaldococcus vulcanius M7] gi|261370440|gb|ACX73189.1| DNA-cytosine methyltransferase [Methanocaldococcus vulcanius M7] Length = 364 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 41/140 (29%), Gaps = 62/140 (44%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---------- 50 +LK DLFCG GG + + S E+N + +Y NF Sbjct: 3 ILKFVDLFCGCGGFSRGFVE----EGFKPLVSVELNEDAAFSYALNFNGQIYEKIKYDEY 58 Query: 51 ------------------------------------------LIFGDIAKIKTQDIPDH- 67 +I DI +I + DI Sbjct: 59 RLKELKGYVGVYSFKCPFDEESLRWLRELGTLNQTTEKLSPIIINDDIREIHSLDIKKFA 118 Query: 68 -----DVLLAGFPCQPFSQA 82 DV++ G PC+ ++ A Sbjct: 119 KNKKIDVVIGGPPCEGYTGA 138 >gi|159897057|ref|YP_001543304.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus ATCC 23779] gi|159890096|gb|ABX03176.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus ATCC 23779] Length = 354 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 10/84 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLFCG+GG+ L + +P Y+ N I I ++ ++ Sbjct: 5 VIDLFCGVGGLTHGL----ILEGFGVLAGIDNDPSCKYAYEQNNRTRFIEKSITEVDGRE 60 Query: 64 I------PDHDVLLAGFPCQPFSQ 81 + H +L+ PCQ FSQ Sbjct: 61 LNALYPNNQHKILVGCAPCQDFSQ 84 >gi|227500535|ref|ZP_03930589.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus tetradius ATCC 35098] gi|227217363|gb|EEI82692.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus tetradius ATCC 35098] Length = 321 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI +LF GIG IR E EI+ VK+Y A + + K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNALYGEDYKSKSVVGYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS+ G Sbjct: 63 N-EKIDLIMHGSPCQDFSRIG 82 >gi|218128915|ref|ZP_03457719.1| hypothetical protein BACEGG_00487 [Bacteroides eggerthii DSM 20697] gi|217988878|gb|EEC55195.1| hypothetical protein BACEGG_00487 [Bacteroides eggerthii DSM 20697] Length = 361 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 22/91 (24%) Query: 2 LKITDLFCGIGGIRLDLE------QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 +++ DLFCGIGG+ ++ + + C ++ Y+ N IF D Sbjct: 16 IEVVDLFCGIGGLSYGMKSKGLKIKAGFDLDWTCLYA----------YETNNEAKFIFKD 65 Query: 56 IAKIKTQDI------PDHDVLLAGFPCQPFS 80 I ++ +DI VL PCQPFS Sbjct: 66 IRTVQKEDIIPFYSKKSIKVLAGCAPCQPFS 96 >gi|327309192|ref|XP_003239287.1| hypothetical protein TERG_01268 [Trichophyton rubrum CBS 118892] gi|326459543|gb|EGD84996.1| hypothetical protein TERG_01268 [Trichophyton rubrum CBS 118892] Length = 622 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 D FCG GG+ +Q ++ ++ + + ++ +Y+ANFP+ L ++A+ Sbjct: 316 YTFGDGFCGAGGVSRGAQQA----GLKLSWAFDKSESAINSYRANFPSCLTKHSEVAQFL 371 Query: 61 TQDIPD---HDVLLAGFPCQPFSQA 82 T +P DV+ PCQPFS A Sbjct: 372 TS-LPREILVDVMHVSPPCQPFSPA 395 >gi|306835815|ref|ZP_07468812.1| modification methylase NaeI [Corynebacterium accolens ATCC 49726] gi|304568289|gb|EFM43857.1| modification methylase NaeI [Corynebacterium accolens ATCC 49726] Length = 345 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54 L ++ G GG L LE E++ ++ +T + N ++ G Sbjct: 6 LTSLEICAGAGGQALGLETA----GFTHKAVIEVDQWAAQTLRLNRGDSGPHGKWNVLEM 61 Query: 55 DIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 D+ + D+ G PC PFS AG Sbjct: 62 DVHDFDGKPWRHKIDLFAGGVPCPPFSIAG 91 >gi|260642764|ref|ZP_05417219.2| modification methylase NgoMIV [Bacteroides finegoldii DSM 17565] gi|260620609|gb|EEX43480.1| modification methylase NgoMIV [Bacteroides finegoldii DSM 17565] Length = 327 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 28/85 (32%), Gaps = 6/85 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M ++ G GG L LE E + + N + D+ Sbjct: 1 MYNSIEICAGAGGQALGLEMA----GFSHVALVEYEKDYCECLKRNRQEWNIFCKDVHHF 56 Query: 60 KTQDI-PDHDVLLAGFPCQPFSQAG 83 + D+L G PC PFS AG Sbjct: 57 DGKPYYGQIDLLAGGVPCPPFSVAG 81 >gi|144900416|emb|CAM77280.1| modification methylase MthTI [Magnetospirillum gryphiswaldense MSR-1] Length = 356 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 F GG ++ + +E + ++ N + I + Sbjct: 20 FTFASFFACAGGADFGMKAA----GANPVYVNEFRRSVAELHRLNHGFPVDTRSITETGV 75 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D ++L GFPCQPFS+AG Sbjct: 76 TDYGSPTIMLGGFPCQPFSKAG 97 >gi|319645695|ref|ZP_07999926.1| DNA-cytosine methyltransferase [Bacillus sp. BT1B_CT2] gi|317392242|gb|EFV73038.1| DNA-cytosine methyltransferase [Bacillus sp. BT1B_CT2] Length = 327 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+KI +LF GIG R L + + EI+ +V+ Y A + + + Sbjct: 1 MIKILELFGGIGAPRKALVNLG--VDHKAIDYVEIDEKAVRAYNALYDHRYKPQSVVGYD 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + DVL+ G PCQ FS+AG Sbjct: 59 LR----PDVLVHGSPCQDFSRAG 77 >gi|189423373|ref|YP_001950550.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ] gi|189419632|gb|ACD94030.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ] Length = 375 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 13/88 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 + + D FCG GG ++ ++ F+ +++ + T+ NFP+T I K+ Sbjct: 19 ISVFDFFCGCGGTSRGFQKA----GMDIAFALDVDKDAKNTFTKNFPSTDFCDKSIKKLT 74 Query: 61 TQDIPD-HD-------VLLAGFPCQPFS 80 D D + PCQPF+ Sbjct: 75 VLDFQHTLDKYKDSYKLFCGCAPCQPFT 102 >gi|170719036|ref|YP_001784193.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] gi|168827165|gb|ACA32536.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336] Length = 365 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--- 57 M + GI + + + +EI P+ +P GD+ Sbjct: 1 MFTYGSICSGI----EAASVAWQGLG-KPLWFAEIEPFPSALLAYRYPEIPNLGDMTALP 55 Query: 58 -KIKTQDIPDHDVLLAGFPCQPFSQAG 83 KI ++I DVL+ G PCQ FS AG Sbjct: 56 EKILNREIKAPDVLVGGTPCQAFSVAG 82 >gi|330940085|gb|EGH43270.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. pisi str. 1704B] Length = 502 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58 L+ + GI ++ +E + +EI P+ ++P T GD+ K Sbjct: 5 LQYGSVCSGI----EAATAAWHPLGMEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGA 60 Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83 + I DVL+ G PCQ F AG Sbjct: 61 LVLAGKIKAPDVLVGGTPCQAFRVAG 86 >gi|195867543|ref|ZP_03079546.1| type II restriction-modification system methylation subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195867960|ref|ZP_03079957.1| type II restriction-modification system methylation subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195660356|gb|EDX53616.1| type II restriction-modification system methylation subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195660787|gb|EDX54041.1| type II restriction-modification system methylation subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] Length = 323 Score = 65.9 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 11/85 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA----NFPNTLIFGDIAK 58 KI +LF GIG IR E EI+ VK+Y A N+ + G K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNALYEENYKPKSVLG--YK 60 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + I D+++ G PCQ FS+ G Sbjct: 61 APNEKI---DLIMHGSPCQDFSRIG 82 >gi|119490455|ref|ZP_01622916.1| cytosine specific DNA methyltransferase (DDEM) [Lyngbya sp. PCC 8106] gi|119453926|gb|EAW35081.1| cytosine specific DNA methyltransferase (DDEM) [Lyngbya sp. PCC 8106] Length = 399 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-D----- 55 LK DLFCG+GG+ L+ T R +E ++ + ++ Y+ N P T + D Sbjct: 3 LKALDLFCGMGGLSWGLKST---RKIEPIWAVDNCQTALNLYELNLPKTNLLNLDLSRQL 59 Query: 56 -----IAKIKTQDIPDHDVLLAGFPCQPFSQ 81 I KI D+++ G PCQ F+Q Sbjct: 60 DVTSLIEKINFN--GGIDLMVGGSPCQGFTQ 88 >gi|113461565|ref|YP_719634.1| DNA-cytosine methyltransferase [Haemophilus somnus 129PT] gi|112823608|gb|ABI25697.1| DNA-cytosine methyltransferase [Haemophilus somnus 129PT] Length = 365 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 9/87 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--- 57 M + GI + + + +EI P+ +P GD+ Sbjct: 1 MFTYGSICSGI----EAASVAWQGLG-KPLWFAEIEPFPSALLAYRYPEIPNLGDMTALP 55 Query: 58 -KIKTQDIPDHDVLLAGFPCQPFSQAG 83 KI ++I DVL+ G PCQ FS AG Sbjct: 56 EKILNREIKAPDVLVGGTPCQAFSVAG 82 >gi|152974572|ref|YP_001374089.1| DNA-cytosine methyltransferase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023324|gb|ABS21094.1| DNA-cytosine methyltransferase [Bacillus cytotoxicus NVH 391-98] Length = 371 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 13/96 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQT------FNHRNVECFFSSEINPYSVKTYQANF----PNT 50 + + + F G GG VE +S+EI P + TY N P+T Sbjct: 3 IYRKGEFFNGPGGFAAGARMARVLDANGEEYRVEHTWSNEICPDAAATYINNICPAAPDT 62 Query: 51 LIFGDIAKIKTQD---IPDHDVLLAGFPCQPFSQAG 83 +I D+ + + + D + GFPC FS G Sbjct: 63 VIVQDVRTLDIERDTRLGPIDAFVFGFPCNDFSIVG 98 >gi|237714171|ref|ZP_04544652.1| site-specific DNA-methyltransferase [Bacteroides sp. D1] gi|262408451|ref|ZP_06084998.1| site-specific DNA-methyltransferase [Bacteroides sp. 2_1_22] gi|294644481|ref|ZP_06722241.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CC 2a] gi|229445663|gb|EEO51454.1| site-specific DNA-methyltransferase [Bacteroides sp. D1] gi|262354003|gb|EEZ03096.1| site-specific DNA-methyltransferase [Bacteroides sp. 2_1_22] gi|292640172|gb|EFF58430.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CC 2a] Length = 250 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 26 NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 + F EI+ + F + + D+ ++ +VL GFPCQPFS AG Sbjct: 2 GWQNAFHCEIDDFCNTILNYWFKDAKSYTDVTTTDFREWRGKINVLTGGFPCQPFSVAG 60 >gi|237718974|ref|ZP_04549455.1| site-specific DNA-methyltransferase [Bacteroides sp. 2_2_4] gi|229451752|gb|EEO57543.1| site-specific DNA-methyltransferase [Bacteroides sp. 2_2_4] Length = 250 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 26 NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 + F EI+ + F + + D+ ++ +VL GFPCQPFS AG Sbjct: 2 GWQNAFHCEIDDFCNTILNYWFKDAKSYTDVTTTDFREWRGKINVLTGGFPCQPFSVAG 60 >gi|121583544|ref|YP_973963.1| DNA-cytosine methyltransferase [Polaromonas naphthalenivorans CJ2] gi|120596788|gb|ABM40221.1| DNA-cytosine methyltransferase [Polaromonas naphthalenivorans CJ2] Length = 373 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 11/83 (13%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKTQD 63 DLFCG GG+ L++ V +++ Y+AN + D+ + D Sbjct: 27 IDLFCGAGGLSCGLKK----VGVRVVAGIDVDAACQYPYEANHRGAKFLLQDVTTLTGAD 82 Query: 64 IP------DHDVLLAGFPCQPFS 80 + +L PCQPFS Sbjct: 83 LEALWSPTSVRLLAGCAPCQPFS 105 >gi|326427797|gb|EGD73367.1| methyltransferase [Salpingoeca sp. ATCC 50818] Length = 519 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 12/94 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN------VECFFSSE------INPYSVKTYQANFPN 49 L++ DL+ GIGG+ L N + +S E +N + K YQ N Sbjct: 7 LRVVDLYSGIGGLHAALGVAIARINARPTRAGQAPWSVEDVRPFDVNTAANKVYQHNHSI 66 Query: 50 TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I + + + D ++ L PCQP+++ G Sbjct: 67 APSPRGIDALTPRHVRDSNLWLMSPPCQPYTRIG 100 >gi|116062014|dbj|BAF34635.1| DNA methyltransferase 1a [Brassica rapa] Length = 1528 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ LEQ ++ E + K ++ N P T +F Sbjct: 1091 LDIFAGCGGLSQGLEQAGVSA---TKWAIEYEEPAGKAFRKNHPETTVFVDNCNVILRAI 1147 Query: 54 ----GD----IAKIKTQDIPD---------------HDVLLAGFPCQPFS 80 GD I+ + ++ + D + G PCQ FS Sbjct: 1148 MEKCGDQDECISTKEANELAEKLDEDQKRTLPLPGQVDFINGGPPCQGFS 1197 >gi|300813808|ref|ZP_07094115.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512098|gb|EFK39291.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 321 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI +LF GIG IR E EI+ VK+Y A + + K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNALYGEDYKAKSVVGYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + + D+++ G PCQ FS+ G Sbjct: 63 N-ENIDLVMHGSPCQDFSRIG 82 >gi|325846341|ref|ZP_08169331.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481605|gb|EGC84644.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 315 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI +LF GIG IR E EI+ VK+Y A + + K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNALYGEDYKPKSVVGYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS+ G Sbjct: 63 N-EKIDLIMHGSPCQDFSRIG 82 >gi|261381417|ref|ZP_05985990.1| DNA (cytosine-5-)-methyltransferase [Neisseria subflava NJ9703] gi|284795594|gb|EFC50941.1| DNA (cytosine-5-)-methyltransferase [Neisseria subflava NJ9703] Length = 420 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 36/128 (28%), Gaps = 51/128 (39%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+ DLF G GG+ Q + E + + T Q + I K+ Sbjct: 4 LRFLDLFAGAGGLSEGFIQA----GFKPVAHIESDKAACFTLQTRMAYHWLKS-IDKLDV 58 Query: 62 ---------------QDIPDH-------------------------------DVLLAGFP 75 + IP+H D+++ G P Sbjct: 59 YVDYLNGKLSRTEFYKIIPEHITKTVINMEISENTLKTLFNEIDDLLKDSPLDLIVGGPP 118 Query: 76 CQPFSQAG 83 CQ +S G Sbjct: 119 CQAYSLVG 126 >gi|256544753|ref|ZP_05472125.1| type II restriction-modification system methylation subunit [Anaerococcus vaginalis ATCC 51170] gi|256399642|gb|EEU13247.1| type II restriction-modification system methylation subunit [Anaerococcus vaginalis ATCC 51170] Length = 320 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI +LF GIG IR E EI+ VK+Y A + + K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNALYGEDYKPKSVVGYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS+ G Sbjct: 63 N-EKIDLIMHGSPCQDFSRIG 82 >gi|189500352|ref|YP_001959822.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides BS1] gi|189495793|gb|ACE04341.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides BS1] Length = 420 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 35/127 (27%), Gaps = 49/127 (38%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 LK DLF G GG+ + E E + + T Q + Sbjct: 5 LKFLDLFAGAGGLSEGFIRA----GFEPVAHVESDQAACFTLQTRIGYHWLNERRRIEQY 60 Query: 54 -----GDIA-------------------KIKTQDIPDH-------------DVLLAGFPC 76 G I+ +I +P D+++ G PC Sbjct: 61 AEYLKGAISREAFYEYVPRQVIDSVINAEISAITLPYIFRRVDALLGNHSLDLIVGGPPC 120 Query: 77 QPFSQAG 83 Q +S G Sbjct: 121 QAYSVIG 127 >gi|300925889|ref|ZP_07141727.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 182-1] gi|300418041|gb|EFK01352.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 182-1] Length = 380 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 10/86 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++K+ DLFCG GG+ L+++ + +I+ Y+ N + + + I+ Sbjct: 32 LIKVVDLFCGAGGLTHGLQKS----GLNVVAGYDIDAACRFAYETNNKSLFVQKSVTDIE 87 Query: 61 TQDI------PDHDVLLAGFPCQPFS 80 ++ VL PCQPFS Sbjct: 88 DGELVKYFEGAKVRVLAGCAPCQPFS 113 >gi|70731152|ref|YP_260893.1| DNA-cytosine methyltransferase [Pseudomonas fluorescens Pf-5] gi|68345451|gb|AAY93057.1| DNA-cytosine methyltransferase [Pseudomonas fluorescens Pf-5] Length = 551 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + GI ++ + +EI P+ ++P GD+ K+ Sbjct: 3 ITYGSVCSGI----EAATVAWHPLGWRADWYAEIEPFPSTVLAHHYPEIPNHGDMTKLGA 58 Query: 62 Q----DIPDHDVLLAGFPCQPFSQAG 83 Q I D+L+ G PCQ FS AG Sbjct: 59 QVLAGKIAAPDILVGGTPCQAFSVAG 84 >gi|66806465|ref|XP_636955.1| DNA -methyltransferase [Dictyostelium discoideum AX4] gi|74852778|sp|Q54JH6|CMT1_DICDI RecName: Full=DNA (cytosine-5)-methyltransferase gi|60465358|gb|EAL63449.1| DNA -methyltransferase [Dictyostelium discoideum AX4] Length = 379 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ + + GIGG+ L+++ + + S +IN + Y+ F I Sbjct: 4 LRVLEFYSGIGGMHYGLQESG--VDFQVIQSFDINTNANLNYKYTFNEDSSQKSIESYSV 61 Query: 62 QDIP--DHDVLLAGFPCQPFSQAG 83 +++ + L PCQPF++ G Sbjct: 62 EELEGFKANAWLMSPPCQPFTRLG 85 >gi|307330945|ref|ZP_07610077.1| DNA-cytosine methyltransferase [Streptomyces violaceusniger Tu 4113] gi|306883406|gb|EFN14460.1| DNA-cytosine methyltransferase [Streptomyces violaceusniger Tu 4113] Length = 386 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 15/93 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIF-G 54 ++ G GG + L + EI+ ++ T ++N + + Sbjct: 8 FTSVEICAGAGGQAVGLHEA----GFRHLALIEIDEHACATLESNVTGNPEWDGCKVLKR 63 Query: 55 DIAKIKTQDIP----DHDVLLAGFPCQPFSQAG 83 D+ + K ++ + D+L G PC PFS AG Sbjct: 64 DLTEFKVDELGLKPGELDLLAGGVPCPPFSAAG 96 >gi|121593710|ref|YP_985606.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42] gi|121593834|ref|YP_985730.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42] gi|120605790|gb|ABM41530.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42] gi|120605914|gb|ABM41654.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42] Length = 539 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----KIKTQD 63 GI + + +E + +EI P+ +P GD+ +++ Sbjct: 23 CSGI----EAVSLAWQPIGLEAAWFAEIEPFPSAVLAHRYPRVPNLGDMTAIARQVRAGT 78 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+L+ G PCQ FS AG Sbjct: 79 VPAPDILVGGTPCQSFSVAG 98 >gi|297159178|gb|ADI08890.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1] Length = 386 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 15/93 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIF-G 54 ++ G GG + L + EI+ + +T + N + + + Sbjct: 8 FTSVEICAGAGGQAVGLHEA----GFRHLALIEIDDNACETLELNVTGNPEWGDCKVLKR 63 Query: 55 DIAKIKTQDIP----DHDVLLAGFPCQPFSQAG 83 D+ K ++ + D+L G PC PFS AG Sbjct: 64 DLTKFDVGELSLNPGELDLLAGGVPCPPFSAAG 96 >gi|326776070|ref|ZP_08235335.1| DNA-cytosine methyltransferase [Streptomyces cf. griseus XylebKG-1] gi|326656403|gb|EGE41249.1| DNA-cytosine methyltransferase [Streptomyces cf. griseus XylebKG-1] Length = 463 Score = 65.6 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 29/104 (27%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----------------- 47 +LF G GG+ + + + +E N + +T A+ Sbjct: 17 VELFAGGGGLAMGVHRA----GFRPLLFNEFNNRACETLIASAGRVLGDSGLALIQDTAP 72 Query: 48 -------PNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 P L GD+ ++ + + DVL G PCQPFS G Sbjct: 73 VPPGPGEPAPLYPGDVRELDLRKFEGEVDVLAGGPPCQPFSAGG 116 >gi|49117032|gb|AAH72774.1| Dnmt1 protein [Xenopus laevis] Length = 1490 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F + I Sbjct: 1014 LRTLDVFSGCGGLSEGFHQAGIS---ETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNILL 1070 Query: 61 ------------TQDIP---DHDVLLAGFPCQPFS 80 Q +P D ++L G PCQ FS Sbjct: 1071 KLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFS 1105 >gi|17225548|gb|AAL37469.1|AF328924_2 cytosine-specific DNA methyltransferase [Helicobacter pylori] Length = 107 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 17/89 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPNTL-IFGDI- 56 KI DLFCG GG LE ++C + ++ T++ N N + + GDI Sbjct: 3 YKILDLFCGAGGFSAGLEYLKEFDALIGLDC------DKQALITFENNHKNAIGVCGDIT 56 Query: 57 -AKIKTQDIP-----DHDVLLAGFPCQPF 79 +IK + I + ++++ G PCQ F Sbjct: 57 QTEIKEKVIELAKKLEINMIIGGPPCQGF 85 >gi|148225023|ref|NP_001084021.1| DNA (cytosine-5-)-methyltransferase 1 [Xenopus laevis] gi|1731732|dbj|BAA11458.1| DNA (cytosine-5-)-methyltransferase [Xenopus laevis] Length = 1490 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F + I Sbjct: 1014 LRTLDVFSGCGGLSEGFHQAGIS---ETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNILL 1070 Query: 61 ------------TQDIP---DHDVLLAGFPCQPFS 80 Q +P D ++L G PCQ FS Sbjct: 1071 KLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFS 1105 >gi|297800866|ref|XP_002868317.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp. lyrata] gi|297314153|gb|EFH44576.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp. lyrata] Length = 1506 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ LE+ + ++ E + + ++ N P+ +F Sbjct: 1068 LDIFAGCGGLSYGLEKAGVS---DTKWAIEYEEPAAQAFKQNHPDATVFVDNCNVILRAI 1124 Query: 54 ----GDI-------------AKIKTQ---DIP---DHDVLLAGFPCQPFS 80 GD+ AK+ +P D + G PCQ FS Sbjct: 1125 MEKGGDVDDCISTTEAAELAAKLDENQKSTLPLPGQVDFINGGPPCQGFS 1174 >gi|325475447|gb|EGC78628.1| hypothetical protein HMPREF9353_00209 [Treponema denticola F0402] Length = 354 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 14/90 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 K D FCG GG+ L Q ++ + + + TY+ N P+ T I DI +++ Sbjct: 7 YKAIDFFCGGGGMTYGLRQA----GIDVIAGIDFDKDAKATYEYNNPHSTFIEVDIKELE 62 Query: 61 TQDIPDH---------DVLLAGFPCQPFSQ 81 + + + PCQ +S Sbjct: 63 NEYFERIFKIKKKDDKLIFVGCSPCQFYSI 92 >gi|83649276|ref|YP_437711.1| site-specific DNA methylase [Hahella chejuensis KCTC 2396] gi|83637319|gb|ABC33286.1| Site-specific DNA methylase [Hahella chejuensis KCTC 2396] Length = 404 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 9/86 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIK 60 + F GIG + L C ++++I+P + Y+ F + GD+ + Sbjct: 5 TFIEFFAGIGLMHAGL----VGSGWRCAYANDIDPKKYQMYRDRFGDAGYYHIGDVWETD 60 Query: 61 T--QDIPDHDVL-LAGFPCQPFSQAG 83 + I +L A FPC S AG Sbjct: 61 EVVERIEQAPLLATASFPCVDLSLAG 86 >gi|47220040|emb|CAG12188.1| unnamed protein product [Tetraodon nigroviridis] Length = 1209 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 + D+F G GG+ Q E ++ E+ + + ++ N P +F + I Sbjct: 783 YRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWEPAAQAFRLNNPGATVFTEDCNILL 839 Query: 61 ------------TQDIP---DHDVLLAGFPCQPFS 80 Q +P D ++L G PCQ FS Sbjct: 840 KLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 874 >gi|294664030|ref|ZP_06729438.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292606199|gb|EFF49442.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 349 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 13/85 (15%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQD 63 LF G GG+ + ++ + +++ +T+ NFP I I ++ T + Sbjct: 11 ISLFSGGGGMDIGIKAA----GFDIKVATDAESLCQETFAKNFPGVPFIVRRIGELSTSE 66 Query: 64 IPD--------HDVLLAGFPCQPFS 80 + D D+L+ G PC FS Sbjct: 67 LLDAAGLAPGEVDLLIGGPPCPAFS 91 >gi|241763153|ref|ZP_04761213.1| C-5 cytosine-specific DNA methylase [Acidovorax delafieldii 2AN] gi|241367778|gb|EER62032.1| C-5 cytosine-specific DNA methylase [Acidovorax delafieldii 2AN] Length = 536 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----KIKTQD 63 GI + + +E + +EI P+ +P GD+ +++ Sbjct: 23 CSGI----EAVSLAWQPLGLEAAWFAEIEPFPSAVLAHRYPRVPNLGDMTAIARQVRAGT 78 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+L+ G PCQ FS AG Sbjct: 79 VPAPDILVGGTPCQSFSVAG 98 >gi|288573115|ref|ZP_06391472.1| DNA-cytosine methyltransferase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568856|gb|EFC90413.1| DNA-cytosine methyltransferase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 350 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 15/88 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY---QANFPNTLIFGDIAK 58 + + DLFCG GG+ + + + K Y + N I D+ Sbjct: 5 ISVVDLFCGAGGLTHGFVM----EGFRVLAGVDTDK-ACK-YPFEKNNAGAEFIASDVRD 58 Query: 59 IKTQDI----PDHD--VLLAGFPCQPFS 80 + +D+ P+ D VL+ PCQPFS Sbjct: 59 LSPEDLAKLYPEGDMKVLVGCAPCQPFS 86 >gi|89890924|ref|ZP_01202433.1| DNA (cytosine-5-)-methyltransferase, dcm [Flavobacteria bacterium BBFL7] gi|89517069|gb|EAS19727.1| DNA (cytosine-5-)-methyltransferase, dcm [Flavobacteria bacterium BBFL7] Length = 356 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 14/90 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +K D FCG GG+ ++ ++ + TY+AN N I D+ ++K Sbjct: 9 IKAVDFFCGGGGMSYGMQ----TSGIQVLAGIDYEENCRSTYEANINNAKFIKADVFELK 64 Query: 61 TQDI-------PDHD--VLLAGFPCQPFSQ 81 +D+ + D +L+ PCQ +S Sbjct: 65 EEDLQNTLNLTRNDDELLLIGCSPCQFWSI 94 >gi|15838375|ref|NP_299063.1| DNA methyltransferase [Xylella fastidiosa 9a5c] gi|9106848|gb|AAF84583.1|AE003999_11 DNA methyltransferase [Xylella fastidiosa 9a5c] Length = 537 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----KIKTQD 63 GI + + +E + +EI P+ +P GD+ +++ Sbjct: 23 CSGI----EAVSLAWQPLGLEAAWFAEIEPFPSAVLAHRYPRVPNLGDMTAIARQVRAGT 78 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+L+ G PCQ FS AG Sbjct: 79 VPAPDILVGGTPCQSFSVAG 98 >gi|309790719|ref|ZP_07685269.1| site-specific DNA-methyltransferase [Oscillochloris trichoides DG6] gi|308227250|gb|EFO80928.1| site-specific DNA-methyltransferase [Oscillochloris trichoides DG6] Length = 368 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 10/85 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ DLFCG+GG+ L + H +I+PY Y+ N T I D+A I Sbjct: 17 IRGVDLFCGVGGLTHGLIRQGLHITHGI----DIDPYCRFPYENNNNATFIESDVANISG 72 Query: 62 QDIPDH--D----VLLAGFPCQPFS 80 ++ + D +L PCQPFS Sbjct: 73 SELENILGDAQLRLLAGCAPCQPFS 97 >gi|218134945|ref|ZP_03463749.1| hypothetical protein BACPEC_02850 [Bacteroides pectinophilus ATCC 43243] gi|217990330|gb|EEC56341.1| hypothetical protein BACPEC_02850 [Bacteroides pectinophilus ATCC 43243] Length = 416 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 39/130 (30%), Gaps = 52/130 (40%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT---------YQAN------ 46 L DLF G GG+ Q+ E+N ++ KT + N Sbjct: 6 LNYIDLFAGAGGLSEGFIQS----GYRPVAHVEMNEHAAKTIETRIAYYYLKDNGKIKSY 61 Query: 47 ----------------FPNTL----------------IFGDIAKIK-TQDIPDHDVLLAG 73 P IF I IK ++I DV++ G Sbjct: 62 YDYEKGKITREQLLEKIPKEELKTVINKEMSESTIKGIFNTIDDIKREKEIDKIDVIIGG 121 Query: 74 FPCQPFSQAG 83 PCQ +S G Sbjct: 122 PPCQAYSLVG 131 >gi|210610975|ref|ZP_03288684.1| hypothetical protein CLONEX_00874 [Clostridium nexile DSM 1787] gi|210152200|gb|EEA83207.1| hypothetical protein CLONEX_00874 [Clostridium nexile DSM 1787] Length = 423 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 39/130 (30%), Gaps = 52/130 (40%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT---------YQAN------ 46 L DLF G GG+ Q+ E+N ++ KT + N Sbjct: 6 LNYIDLFAGAGGLSEGFIQS----GYRPVAHVEMNEHAAKTIETRIAYYYLKDNGKIKSY 61 Query: 47 ----------------FPNTL----------------IFGDIAKIK-TQDIPDHDVLLAG 73 P IF I IK ++I DV++ G Sbjct: 62 YDYEKGKITREQLLEKIPKEELKTVINKEMSESTIKGIFNTIDDIKREKEIDKIDVIIGG 121 Query: 74 FPCQPFSQAG 83 PCQ +S G Sbjct: 122 PPCQAYSLVG 131 >gi|160894869|ref|ZP_02075643.1| hypothetical protein CLOL250_02419 [Clostridium sp. L2-50] gi|156863300|gb|EDO56731.1| hypothetical protein CLOL250_02419 [Clostridium sp. L2-50] Length = 423 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 39/130 (30%), Gaps = 52/130 (40%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT---------YQAN------ 46 L DLF G GG+ Q+ E+N ++ KT + N Sbjct: 6 LNYIDLFAGAGGLSEGFIQS----GYRPVAHVEMNEHAAKTIETRIAYYYLKDNGKIKSY 61 Query: 47 ----------------FPNTL----------------IFGDIAKIK-TQDIPDHDVLLAG 73 P IF I IK ++I DV++ G Sbjct: 62 YDYEKGKITREQLLEKIPKEELKTVINQEMSESTIKGIFNTIDDIKREKEIDKIDVIIGG 121 Query: 74 FPCQPFSQAG 83 PCQ +S G Sbjct: 122 PPCQAYSLVG 131 >gi|157825194|ref|YP_001492914.1| site-specific DNA methylase [Rickettsia akari str. Hartford] gi|157799152|gb|ABV74406.1| Site-specific DNA methylase [Rickettsia akari str. Hartford] Length = 93 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 31 FSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81 FSS+I + Y+ N + L +G+I +I IP HD+L AGFP Q FS Sbjct: 3 FSSDIGKDVQEAYKRNLGDKL-YGNITEISAHKIPKHDILCAGFPYQSFSI 52 >gi|322701389|gb|EFY93139.1| cytosine C5-DNA methyltransferase, putative [Metarhizium acridum CQMa 102] Length = 657 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---D--I 56 D F G GG+ + + + + +P +TY NFP T ++ D I Sbjct: 297 YTFFDAFSGAGGVSRGAQNA----GFKVTHAIDKSPDVWRTYSLNFPETKLYKWPVDRFI 352 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82 + I DVL PCQ FS A Sbjct: 353 GQTDDSSI-RVDVLHMSPPCQYFSPA 377 >gi|78047961|ref|YP_364136.1| DNA methyltransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036391|emb|CAJ24082.1| DNA methyltransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 538 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----KIKTQD 63 GI + + +E + +EI P+ +P GD+ +++ Sbjct: 23 CSGI----EAVSLAWQPIGLEAAWFAEIEPFPSAVLAHRYPRVPNLGDMTAIARQVRAGT 78 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+L+ G PCQ FS AG Sbjct: 79 VPAPDILVGGTPCQSFSVAG 98 >gi|156739999|gb|ABU93584.1| DNA cytosine 5-methyltransferase 1 [Ovis aries] Length = 1572 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+ G GG+ Q E ++ E +P + ++ N P + +F Sbjct: 1106 LRTLDVSSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNVL 1161 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G++ + Q +P D ++L G PCQ FS Sbjct: 1162 LKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 1197 >gi|328698549|ref|XP_003240668.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like [Acyrthosiphon pisum] Length = 346 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60 L++ LF GIG L + ++E ++SEI+ ++ + +F + + G + +I Sbjct: 60 LRVLSLFDGIGTGYYALLKLG--FDIEVIYASEIDKDALMVTKYHFSDNIKQLGSVTEIT 117 Query: 61 T---QDIPDHDVLLAGFPCQPFS 80 T I ++L G PC S Sbjct: 118 TKMLDQIAPINLLFGGSPCSDLS 140 >gi|327284227|ref|XP_003226840.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Anolis carolinensis] Length = 1553 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F Sbjct: 1076 LRSLDVFSGCGGLSEGFHQAEVS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1132 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ Q +P D ++L G PCQ FS Sbjct: 1133 KLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 1167 >gi|326802740|ref|YP_004320558.1| DNA (cytosine-5-)-methyltransferase [Aerococcus urinae ACS-120-V-Col10a] gi|326651598|gb|AEA01781.1| DNA (cytosine-5-)-methyltransferase [Aerococcus urinae ACS-120-V-Col10a] Length = 321 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI +LF GIG IR E EI+ VK+Y A + + + K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNALYGESYKAKSVIGYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS+ G Sbjct: 63 N-DKIDLVMHGSPCQDFSRIG 82 >gi|317011769|gb|ADU85516.1| site-specific DNA-methyltransferase [Helicobacter pylori SouthAfrica7] Length = 166 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56 + + F G GG L Q + + + ++I+ ++KT N N + I Sbjct: 3 YNVCEFFVGAGGSHLGFIQ----QGFKTLYVNDIDKDALKTLLHN--NKELKDAIIDQTS 56 Query: 57 -AKIKTQDI-----PDHDVLLAGFPCQPFSQAG 83 +I + + + DV+ AG C+ FS AG Sbjct: 57 STEIDPKKLQAQIKQEIDVIFAGIVCKSFSLAG 89 >gi|94995093|ref|YP_603191.1| Type II restriction-modification system methylation subunit [Streptococcus pyogenes MGAS10750] gi|94548601|gb|ABF38647.1| Type II restriction-modification system methylation subunit [Streptococcus pyogenes MGAS10750] Length = 321 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI +LF GIG IR E EI+ VK+Y A + + + K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDRACVKSYNALYGEDYKPKSVVEYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS+ G Sbjct: 63 N-AKIDLVMHGSPCQDFSRIG 82 >gi|313683546|ref|YP_004061284.1| DNA-cytosine methyltransferase [Sulfuricurvum kujiense DSM 16994] gi|313156406|gb|ADR35084.1| DNA-cytosine methyltransferase [Sulfuricurvum kujiense DSM 16994] Length = 332 Score = 65.2 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------NTLIFGD 55 L +L G GG L L + EI Y+ T + N +I GD Sbjct: 5 LTSIELCAGAGGQALGLHLA----GFKHRLLIEIENYACNTLRMNNKLHALGWEEIIEGD 60 Query: 56 IAKIKTQDIPD---HDVLLAGFPCQPFSQAG 83 + + D+ + D++ G PC PFS+AG Sbjct: 61 LLEFAKSDLSNYSNIDLVAGGVPCPPFSKAG 91 >gi|260557494|ref|ZP_05829709.1| site-specific DNA-methyltransferase [Acinetobacter baumannii ATCC 19606] gi|193076851|gb|ABO11576.2| site-specific DNA-methyltransferase [Acinetobacter baumannii ATCC 17978] gi|260409120|gb|EEX02423.1| site-specific DNA-methyltransferase [Acinetobacter baumannii ATCC 19606] Length = 304 Score = 64.8 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 33/91 (36%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QAN------FPNTLIF 53 + LF G GG L + E + Y+ + + N FP I+ Sbjct: 1 MNELALFAGAGGGVL----ASYLLGWRTVCAVERDAYAAQVLAQRQNDGILEAFP---IW 53 Query: 54 GDIAKIKTQDIPD-HDVLLAGFPCQPFSQAG 83 DI + DV+ GFPCQ S AG Sbjct: 54 SDITTFDGKPWQGIVDVISGGFPCQDISSAG 84 >gi|134296233|ref|YP_001119968.1| DNA-cytosine methyltransferase [Burkholderia vietnamiensis G4] gi|134139390|gb|ABO55133.1| DNA-cytosine methyltransferase [Burkholderia vietnamiensis G4] Length = 461 Score = 64.8 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 38/134 (28%), Gaps = 59/134 (44%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------------- 50 +LF G GG+ L + + E E N ++ T AN N Sbjct: 33 IELFSGCGGLALGIARA----GFEHRLLVEWNAHACATLNANATNGNGVAATTAHAADRA 88 Query: 51 -----------------LIFGDIAKIKTQD------------------------IPDHDV 69 + GD+ I + D D+ Sbjct: 89 AHADRQDGASAIDARWLVARGDVRAIDWTAARDSLSGVASAASLAGGASLTDPGLADLDL 148 Query: 70 LLAGFPCQPFSQAG 83 + G PCQPFS AG Sbjct: 149 IAGGPPCQPFSSAG 162 >gi|167851523|ref|ZP_02477031.1| DNA-cytosine methyltransferase [Burkholderia pseudomallei B7210] Length = 352 Score = 64.8 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG GG L F V +++P Y+AN + DI+K+ ++ Sbjct: 12 VDLFCGAGG----LTHGFILEGVPVVAGIDMDPACRFPYEANNQARFVERDISKVTMAEL 67 Query: 65 P----DHD--VLLAGFPCQPFS 80 D D VL PCQPFS Sbjct: 68 NALFGDADLTVLAGCAPCQPFS 89 >gi|297804976|ref|XP_002870372.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp. lyrata] gi|297316208|gb|EFH46631.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp. lyrata] Length = 1496 Score = 64.8 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ LE+ + ++ E + + ++ N P T +F Sbjct: 1048 LDIFAGCGGLSYGLEKAGVS---DTKWAIEYEEPAAQAFKQNHPKTTVFVDNCNVILRAI 1104 Query: 54 ----GDI-------------AKIKTQD---IP---DHDVLLAGFPCQPFS 80 GD+ AK+ +P D + G PCQ FS Sbjct: 1105 MEKCGDVDDCISTTEAAELAAKLDESQKSILPLPGQVDFINGGPPCQGFS 1154 >gi|145592040|ref|YP_001154042.1| DNA-cytosine methyltransferase [Pyrobaculum arsenaticum DSM 13514] gi|145283808|gb|ABP51390.1| DNA-cytosine methyltransferase [Pyrobaculum arsenaticum DSM 13514] Length = 318 Score = 64.8 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 4/62 (6%) Query: 25 RNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDI---PDHDVLLAGFPCQPFS 80 + + +++ +V+TY AN NT++ DI ++ +D+ + DVL+ PC+PF+ Sbjct: 21 AGFKIRVALDVDRDAVRTYSANHVNTVVLQRDIREVSYEDLVKYGEADVLIGSPPCEPFT 80 Query: 81 QA 82 A Sbjct: 81 SA 82 >gi|34451619|gb|AAQ72366.1| TspRI methylase [Thermus sp. R] Length = 431 Score = 64.8 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 11/85 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + DLF G GG + EQ +I + KT+ + P I GD + + Sbjct: 69 LVDLFSGAGGFSVGFEQA----GFVSALGLDIYTVAAKTFMEHHPRAGFILGDARAVTPE 124 Query: 63 DIPDH------DVLLAGFPCQPFSQ 81 + + V+ G PCQ FS Sbjct: 125 MLLEALNGLRPHVVTGGVPCQRFSL 149 >gi|9632097|ref|NP_048886.1| hypothetical protein PBCV1_A530R [Paramecium bursaria Chlorella virus 1] gi|1620201|gb|AAC96897.1| M.CviAIV cytosine DNA methyltransferase [Paramecium bursaria Chlorella virus 1] Length = 335 Score = 64.8 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 L+ DLF GIGGI L + V E N + + P +F D+ Sbjct: 3 LRALDLFSGIGGITHGLRKI-----VTPVAFVEKNDEARAFLEKKNPTIPVFDDVCSFDA 57 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 T+ I D++ A PC FS AG Sbjct: 58 TKWIDKVDIITAVEPCTGFSNAG 80 >gi|308185228|ref|YP_003929361.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180] gi|308061148|gb|ADO03044.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180] Length = 368 Score = 64.8 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 44/125 (35%), Gaps = 44/125 (35%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE---IN--------------------- 36 MLK+ +F GIG L++ E F+ + I+ Sbjct: 1 MLKVASVFSGIGAFEWALKRL--DLEHEILFACDNGNIDLKLDYDAELNKIKSLSSIKEK 58 Query: 37 ---------PYSVKT------YQANF--PNTLIFGDIAKIKTQDIPD-HDVLLAGFPCQP 78 +S KT Y AN+ N F DI + D D D+L+ G PCQ Sbjct: 59 KNYTNNLYKQHSRKTNFVKQSYLANYTIQNDCFFQDIKLLDGTDFTDKVDILVGGSPCQS 118 Query: 79 FSQAG 83 FS G Sbjct: 119 FSSIG 123 >gi|71274663|ref|ZP_00650951.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Dixon] gi|71899625|ref|ZP_00681779.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Ann-1] gi|71164395|gb|EAO14109.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Dixon] gi|71730577|gb|EAO32654.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Ann-1] Length = 329 Score = 64.8 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 ++ G GG L LE E+ P + T + N P +I D+ + Sbjct: 15 FNSLEMCAGAGGQALGLEM----VGFNHAALVELEPTACATLRLNRPAWNVIEDDLRRFD 70 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 D++ G PC PFS+AG Sbjct: 71 GLPYQGIDLVAGGVPCPPFSKAG 93 >gi|301609669|ref|XP_002934384.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Xenopus (Silurana) tropicalis] Length = 1492 Score = 64.8 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F Sbjct: 1016 LRTLDVFSGCGGLSEGFHQAGIS---ETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1072 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ Q +P D ++L G PCQ FS Sbjct: 1073 KLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFS 1107 >gi|182765469|ref|NP_001116832.1| hypothetical protein LOC100036795 [Xenopus laevis] gi|171846414|gb|AAI61682.1| LOC100036795 protein [Xenopus laevis] Length = 1492 Score = 64.8 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F Sbjct: 1016 LRTLDVFSGCGGLSEGFHQAGIS---ETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1072 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ Q +P D ++L G PCQ FS Sbjct: 1073 KLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFS 1107 >gi|145635992|ref|ZP_01791674.1| modification methylase HgiDII [Haemophilus influenzae PittAA] gi|145266758|gb|EDK06780.1| modification methylase HgiDII [Haemophilus influenzae PittAA] Length = 343 Score = 64.8 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 10/86 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++ DLFCG GG+ L+Q ++ +I ++ N + D++ + Sbjct: 1 MIEAIDLFCGAGGLTAGLQQA----GIKVKAGYDIEEQCRYAFEFNNHAEFVNKDVSLVD 56 Query: 61 TQDIPDHD------VLLAGFPCQPFS 80 ++I +L PCQPFS Sbjct: 57 NEEIARRFSKKAIRLLAGCAPCQPFS 82 >gi|325279948|ref|YP_004252490.1| DNA-cytosine methyltransferase [Odoribacter splanchnicus DSM 20712] gi|324311757|gb|ADY32310.1| DNA-cytosine methyltransferase [Odoribacter splanchnicus DSM 20712] Length = 359 Score = 64.8 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 14/90 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L+ D FCG GG+ L Q VE ++ TY+AN P T G DI K++ Sbjct: 4 LRAIDFFCGGGGMTCGLRQA----GVEVMAGVDLAEECESTYEANNPGTKFVGADITKLE 59 Query: 61 TQD-------IPDHD--VLLAGFPCQPFSQ 81 I + D VL+ PCQ +S Sbjct: 60 ENYFEKQFGLIRNDDNLVLVGCSPCQYYSI 89 >gi|320527420|ref|ZP_08028601.1| DNA (cytosine-5-)-methyltransferase [Solobacterium moorei F0204] gi|320132133|gb|EFW24682.1| DNA (cytosine-5-)-methyltransferase [Solobacterium moorei F0204] Length = 428 Score = 64.8 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 36/130 (27%), Gaps = 52/130 (40%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT------------------Y 43 DLF G GG+ Q+ + E++ ++ +T Y Sbjct: 10 YNFIDLFAGAGGLSEGFLQS----GFKPVAHVEMDEFAARTLETRSAYYYLKETGNIGLY 65 Query: 44 QANFPNTL--------IFGDIAKIKTQD----------------------IPDHDVLLAG 73 + + I I K + I DV++ G Sbjct: 66 KKYLSGAIDRSEFMQFIPASITKTIINETMSDESLTGIFRTIDGIMKIRGIEKIDVIVGG 125 Query: 74 FPCQPFSQAG 83 PCQ +S G Sbjct: 126 PPCQAYSLVG 135 >gi|332029105|gb|EGI69118.1| tRNA (cytosine-5-)-methyltransferase [Acromyrmex echinatior] Length = 309 Score = 64.8 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDIPD--HDVLLAGFPCQPFSQAG 83 + + +INP + Y NFP T++ +I I Q++ D++ PCQPF++ G Sbjct: 9 KVVAAIDINPVANDVYHHNFPETVLMNRNIQSINAQELNKLNVDIMFMSPPCQPFTRLG 67 >gi|326385181|ref|ZP_08206848.1| C-5 cytosine-specific DNA methylase [Gordonia neofelifaecis NRRL B-59395] gi|326196085|gb|EGD53292.1| C-5 cytosine-specific DNA methylase [Gordonia neofelifaecis NRRL B-59395] Length = 425 Score = 64.8 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 I DLF G GG+ + + +V E + +V+T +A + I GD+ + + +D Sbjct: 2 IVDLFAGPGGLDV----AAHWLDVPSIG-IEFDENAVETREA-AGLSSILGDVTRWRPED 55 Query: 64 IPD-HDVLLAGFPCQPFSQAG 83 D +VL G PCQ ++ AG Sbjct: 56 FTDSVNVLTGGPPCQTYTVAG 76 >gi|229008076|ref|ZP_04165619.1| Phage-related DNA methylase [Bacillus mycoides Rock1-4] gi|228753191|gb|EEM02686.1| Phage-related DNA methylase [Bacillus mycoides Rock1-4] Length = 87 Score = 64.8 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 L D+F G+GG RL +EQ + C E + ++ +Y+A DI + Sbjct: 3 LTFLDIFAGVGGFRLGMEQAGHC----CVGFIERDKFARASYKAIHRTEKEWTKRDINGV 58 Query: 60 KT 61 Sbjct: 59 PP 60 >gi|331002102|ref|ZP_08325621.1| hypothetical protein HMPREF0491_00483 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411196|gb|EGG90612.1| hypothetical protein HMPREF0491_00483 [Lachnospiraceae oral taxon 107 str. F0167] Length = 309 Score = 64.8 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 +LF GIG IR L + + EI+ VK+Y A + DI + Sbjct: 2 ELFGGIGAIRKALIR--QNIPHRVIDYVEIDKNCVKSYNALYKANFKSKDIVGYHAPN-E 58 Query: 66 DHDVLLAGFPCQPFSQAG 83 + D+L+ G PCQ FS+ G Sbjct: 59 NIDLLMHGSPCQDFSRVG 76 >gi|56695946|ref|YP_166300.1| C-5 cytosine-specific family DNA methylase [Ruegeria pomeroyi DSS-3] gi|56677683|gb|AAV94349.1| DNA methylase, C-5 cytosine-specific family [Ruegeria pomeroyi DSS-3] Length = 373 Score = 64.8 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 13/86 (15%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQD 63 DLFCG GG+ LE ++I + KT++A P I G I + + Sbjct: 6 IDLFCGAGGLSAGLEMA----GFTVLAGNDIFDAAGKTFEATHPRAKFIPGPIEDLTIEH 61 Query: 64 IPDH--------DVLLAGFPCQPFSQ 81 + + VL G PCQ +S Sbjct: 62 LLEVTGLKPGELTVLAGGPPCQAYSV 87 >gi|325478388|gb|EGC81503.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus prevotii ACS-065-V-Col13] Length = 321 Score = 64.8 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI +LF GIG IR E EI+ VK+Y + + K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNELYGEDYKAKSVVGYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS+ G Sbjct: 63 N-EKIDLIMHGSPCQDFSRIG 82 >gi|240142602|ref|YP_002967115.1| putative DNA methyltransferase [Methylobacterium extorquens AM1] gi|240012549|gb|ACS43774.1| putative DNA methyltransferase [Methylobacterium extorquens AM1] Length = 260 Score = 64.8 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 25/101 (24%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN---PYSVK-----TYQANFPNTLIFGD 55 + DLF G GG+ +T + ++ P + TY+AN D Sbjct: 12 VVDLFSGGGGMSCGFART---PGFRLVGAVDLERGKPSAGATGCNGTYKANIGIDPHRAD 68 Query: 56 IAKIKTQDIPD-------HD-------VLLAGFPCQPFSQA 82 +A + D+ + D VL A PC FS+A Sbjct: 69 LATLTPDDLREAVLRTAGVDLAPGRLGVLAACPPCTDFSRA 109 >gi|198416008|ref|XP_002122948.1| PREDICTED: Zn-finger (CXXC)-5 [Ciona intestinalis] Length = 1305 Score = 64.8 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 L+ D+F G GG+ Q E ++ E+ + + Y+ N P +F + + Sbjct: 843 LRSLDVFSGCGGLSEGFHQAGIA---EPSYAIELWEPAAQAYRLNNPGATVFTEDCNVLL 899 Query: 60 -----------KTQDIP---DHDVLLAGFPCQPFS 80 Q +P D ++L G PCQ FS Sbjct: 900 EMVMNGEERSKCGQRLPQKGDVELLCGGPPCQGFS 934 >gi|189460101|ref|ZP_03008886.1| hypothetical protein BACCOP_00737 [Bacteroides coprocola DSM 17136] gi|255693802|ref|ZP_05417477.1| modification methylase HgiDII [Bacteroides finegoldii DSM 17565] gi|189433184|gb|EDV02169.1| hypothetical protein BACCOP_00737 [Bacteroides coprocola DSM 17136] gi|260620371|gb|EEX43242.1| modification methylase HgiDII [Bacteroides finegoldii DSM 17565] Length = 355 Score = 64.8 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 18/95 (18%) Query: 1 ML----KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGD 55 M+ K D FCG GG+ L Q + + + + +TY+ N + I + Sbjct: 1 MMASKYKAIDFFCGGGGMTCGLRQA----GINVIAGVDFDQDAKETYEYNNSGSVFIQTN 56 Query: 56 IAKIKTQ------DIPDHD---VLLAGFPCQPFSQ 81 I +++ I +D +L+ PCQ +S Sbjct: 57 IKNLRSNYFERKFGIRKNDDFLILVGCSPCQFYSI 91 >gi|325269502|ref|ZP_08136118.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM 16608] gi|324988121|gb|EGC20088.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM 16608] Length = 393 Score = 64.4 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 9/81 (11%) Query: 8 FCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFP--NTLIFGDIAKIKTQD 63 F GIG +E + + ++C F+ +I+ KTY AN+P D+ + Sbjct: 39 FSGIG----AIEHSMHRLGLKCQIQFAGDIDANCKKTYFANYPISEAQWHTDVHDFDAKP 94 Query: 64 IP-DHDVLLAGFPCQPFSQAG 83 D+ + G PCQ FS G Sbjct: 95 YKGKVDLFVGGAPCQAFSLRG 115 >gi|127441|sp|P25265|MTD2_HERAU RecName: Full=Modification methylase HgiDII; Short=M.HgiDII; AltName: Full=Cytosine-specific methyltransferase HgiDII gi|48773|emb|CAA38941.1| methyltransferase [Herpetosiphon aurantiacus] Length = 354 Score = 64.4 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 10/84 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLFCG+GG+ L + +P Y+ N I I+++ ++ Sbjct: 5 VIDLFCGVGGLTHGL----ILEGFGVLAGIDNDPSCKYAYEQNNRTRFIEKSISEVDGRE 60 Query: 64 I------PDHDVLLAGFPCQPFSQ 81 + H +L+ PCQ FSQ Sbjct: 61 LNALYPNNQHKILVGCAPCQDFSQ 84 >gi|227484740|ref|ZP_03915056.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC 51172] gi|227237262|gb|EEI87277.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC 51172] Length = 321 Score = 64.4 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI +LF GIG IR E EI+ VK+Y A + + K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNALYGEDYKPKSVVGYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS+ G Sbjct: 63 N-EQIDLVMHGSPCQDFSRIG 82 >gi|303277675|ref|XP_003058131.1| DNA methyltransferase [Micromonas pusilla CCMP1545] gi|226460788|gb|EEH58082.1| DNA methyltransferase [Micromonas pusilla CCMP1545] Length = 416 Score = 64.4 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 9/90 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDI-- 56 +++ + F G G +R+ L++ R VE + + + + Y ANFPN G++ Sbjct: 62 IRLVEWFSGTGMMRVALDR-GTSRGVEHVAAIDNSEVANAVYAANFPNDATPPSRGNVEH 120 Query: 57 ---AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 A+I + + ++ PCQP+++ G Sbjct: 121 WTAARIDAEGLGAAELWTLSPPCQPYTRKG 150 >gi|171684935|ref|XP_001907409.1| hypothetical protein [Podospora anserina S mat+] gi|170942428|emb|CAP68080.1| unnamed protein product [Podospora anserina S mat+] Length = 752 Score = 64.4 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 D+F G GG +E++ FS + + ++ + NFP T I+ ++ Sbjct: 328 YTAADIFAGAGGASRGIERS----GCRLLFSLDHWEPAARSLRRNFPGTHIYQKEVTDFV 383 Query: 61 TQDIPDH----DVLLAGFPCQPFSQA 82 T+D+P D+L PCQ +S A Sbjct: 384 TEDLPPEHSYPDILHLSPPCQFWSPA 409 >gi|1709163|sp|P50188|MTN1_NOCAE RecName: Full=Modification methylase NaeI; Short=M.NaeI; AltName: Full=Cytosine-specific methyltransferase NaeI gi|775103|gb|AAC43325.1| NaeI modification methyltransferase [Lechevalieria aerocolonigenes] Length = 413 Score = 64.4 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAK---I 59 + ++ G GG L LE+ + E++ + T + N + +I GD+A + Sbjct: 6 VVEICAGAGGQALGLEKA----GFSHRLAVELDVNAAATLRKNLKSDVVITGDVADPSVL 61 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 + +L G PC PFS AG Sbjct: 62 NPMEHLGVSLLAGGVPCPPFSIAG 85 >gi|158320926|ref|YP_001513433.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs] gi|158141125|gb|ABW19437.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs] Length = 423 Score = 64.4 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 38/138 (27%), Gaps = 60/138 (43%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK-------------------- 41 + DLF G GG+ + E E++ + K Sbjct: 4 INFLDLFAGAGGLSEGFLRA----GFEPVAHIELDANACKTLKTRSIYHYLKKNDMLDLY 59 Query: 42 -TYQANFPNTLIFGD--IAK-----------------IKTQDIP---------------- 65 TYQ + + D I K I + +P Sbjct: 60 RTYQKTYNKSEDVKDKAIEKLLSYIPKDQLEPVMNIEISEKTLPYIFQEIDCRLKHMEHE 119 Query: 66 DHDVLLAGFPCQPFSQAG 83 D+++ G PCQ +S G Sbjct: 120 GIDLIIGGPPCQAYSLVG 137 >gi|281416239|ref|YP_003347588.1| DNA cytosine methyltransferase [Enterococcus phage phiFL3A] gi|270209504|gb|ACZ64045.1| DNA cytosine methyltransferase [Enterococcus phage phiFL3A] gi|270209572|gb|ACZ64112.1| DNA cytosine methyltransferase [Enterococcus phage phiFL3B] Length = 317 Score = 64.4 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++I +LF GIG R L + E N +V++Y A F + + + + Sbjct: 1 MIQILELFGGIGAPRKALINLGIPH--KSIDYVEWNEKAVRSYNAMFEKEIKYQPQSVVG 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 P D+L+ G PCQ FS G Sbjct: 59 WNLKP--DILVHGSPCQDFSIGG 79 >gi|159028410|emb|CAO89852.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 446 Score = 64.4 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 18/95 (18%) Query: 1 MLKITDLFCGIGGI-RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAK 58 M K LF GGI + L E ++E+ + ++ N P +L I GDI Sbjct: 1 MRKAISLFA-CGGIGDMALRSG----GFEVVVANELLKDRAEVFKFNHPESLMIIGDIWD 55 Query: 59 IKTQDI----------PDHDVLLAGFPCQPFSQAG 83 K +I + D++ A PCQ S+ G Sbjct: 56 -KKNEIVAETKQRLSGQNLDIVFATPPCQGMSRNG 89 >gi|110005053|emb|CAK99384.1| hypothetical c-5 cytosine-specific dna methyltransferase protein [Spiroplasma citri] Length = 357 Score = 64.4 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 12/84 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKIKTQ 62 DLFCGIGG+ L ++ +E +I+ K++ + N I DI +++ Sbjct: 9 IDLFCGIGGLTNGLVKS----GIEILAGFDIDETCRKSFEQKLNNSPKFIKKDIRELEKN 64 Query: 63 DIPDHD------VLLAGFPCQPFS 80 D+ ++ PCQP+S Sbjct: 65 DLLSFFLQNTYKIIAGCAPCQPYS 88 >gi|127486|sp|P23737|MTS9_STAAU RecName: Full=Modification methylase Sau96I; Short=M.Sau96I; AltName: Full=Cytosine-specific methyltransferase Sau96I gi|581567|emb|CAA37260.1| Sau96I DNA methyltransferase [Staphylococcus aureus] gi|329730456|gb|EGG66846.1| DNA-binding helix-turn-helix protein [Staphylococcus aureus subsp. aureus 21193] Length = 430 Score = 64.4 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 5/66 (7%) Query: 23 NHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI--KTQDI--PDHDVLLAGFPCQ 77 + + + EI+ + +T + N P +I DI I + + D+L G+PCQ Sbjct: 116 ESAGLSTYGAVEIDKNAAETLRINRPKWKVIENDIEFIADNLDEFIDEEIDILSGGYPCQ 175 Query: 78 PFSQAG 83 FS AG Sbjct: 176 TFSYAG 181 >gi|296232860|ref|XP_002807840.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1-like [Callithrix jacchus] Length = 1678 Score = 64.0 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 21/96 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIF------- 53 L+ D+F G GG+ Q E ++ E +P + ++ N P + +F Sbjct: 1201 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQA-FRLNNPGSTVFTEDCNVL 1256 Query: 54 ------GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + Q +P D + L G PCQ FS Sbjct: 1257 LKLVMAGETTNSRGQRLPQKGDVETLCGGQPCQGFS 1292 >gi|322709664|gb|EFZ01240.1| cytosine C5-DNA methyltransferase, putative [Metarhizium anisopliae ARSEF 23] Length = 654 Score = 64.0 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---D--I 56 D F G GG+ + + + + +P +TY NFP ++ D I Sbjct: 294 YTFFDAFSGAGGVSRGAQNA----GFKVTHAIDKSPDVWRTYSLNFPEAKLYKWSVDRFI 349 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82 + I DVL PCQ FS A Sbjct: 350 EQTNDASI-RVDVLHMSPPCQYFSPA 374 >gi|322510870|gb|ADX06184.1| putative C-5 cytosine-specific DNA methyltransferase [Organic Lake phycodnavirus 1] Length = 465 Score = 64.0 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 24 HRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK-TQDIPDHDVLLAGFPCQPFSQ 81 ++ N KT + N P+ ++ + KI +Q + D+L G PCQ FSQ Sbjct: 162 KSGFTPILLNDNNNDCCKTLKHNHPDANIVCSSMDKIDYSQYVNKVDLLTGGVPCQSFSQ 221 Query: 82 AG 83 AG Sbjct: 222 AG 223 >gi|303233873|ref|ZP_07320524.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna BVS033A4] gi|302495017|gb|EFL54772.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna BVS033A4] Length = 315 Score = 64.0 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI + F GIG IR E EI+ VK+Y A + + K Sbjct: 5 KILEFFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNALYGEDYKPKSVVAYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+++ G PCQ FS+ G Sbjct: 63 N-EKIDLVMHGSPCQDFSRIG 82 >gi|291238124|ref|XP_002738981.1| PREDICTED: DNA (cytosine-5-)-methyltransferase [Saccoglossus kowalevskii] Length = 1294 Score = 64.0 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56 L+ D+F G GG+ Q+ E ++ E + + ++ N P +F D Sbjct: 824 LRSLDVFAGCGGLSEGFHQSGVA---ESTWAIEKEEPAAQAFRLNNPGCTVFTDDCNTLL 880 Query: 57 --------AKIKTQDIPD---HDVLLAGFPCQPFS 80 Q +P ++L G PCQ FS Sbjct: 881 RLVMDGETTNSVGQKLPQKGQVELLCGGPPCQGFS 915 >gi|283462212|gb|ADB22400.1| DNA (cytosine-5-)-methyltransferase [Saccoglossus kowalevskii] Length = 820 Score = 64.0 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56 L+ D+F G GG+ Q+ E ++ E + + ++ N P +F D Sbjct: 350 LRSLDVFAGCGGLSEGFHQSGVA---ESTWAIEKEEPAAQAFRLNNPGCTVFTDDCNTLL 406 Query: 57 --------AKIKTQDIPD---HDVLLAGFPCQPFS 80 Q +P ++L G PCQ FS Sbjct: 407 RLVMDGETTNSVGQKLPQKGQVELLCGGPPCQGFS 441 >gi|159905323|ref|YP_001548985.1| DNA-cytosine methyltransferase [Methanococcus maripaludis C6] gi|159886816|gb|ABX01753.1| DNA-cytosine methyltransferase [Methanococcus maripaludis C6] Length = 355 Score = 64.0 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 41/132 (31%), Gaps = 55/132 (41%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------- 50 + DLFCG GG + + + E++ + +Y N+ T Sbjct: 1 MNFIDLFCGCGGFSRGFVE----MGFKPLLAIELDENAANSYALNYNGTVFEKKLNEFLE 56 Query: 51 -------------------------------LIFGDIAKIKTQDIP-----DHD----VL 70 +I DI +I ++ I + D ++ Sbjct: 57 KEVYFKLEDFLVNDDIAEFKKSNNYENLNPVVINQDIREINSKYISNKIKDNFDSKIGLV 116 Query: 71 LAGFPCQPFSQA 82 + G PC+ ++ A Sbjct: 117 IGGPPCEGYTGA 128 >gi|325965496|ref|YP_004243400.1| DNA-methyltransferase Dcm [Arthrobacter phenanthrenivorans Sphe3] gi|323471583|gb|ADX75266.1| DNA-methyltransferase Dcm [Arthrobacter phenanthrenivorans Sphe3] Length = 389 Score = 64.0 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 24/106 (22%) Query: 2 LKITDLFCGIGGIRLDLE---QTFNHRNVECFFSSEINPYSVKTYQANF----------- 47 ++ +LF G GG+ L Q + ++++ + + KTY+ N Sbjct: 6 YRMGELFSGPGGMALGARLAAQAVEGVALRHAWANDYDLDTCKTYKRNILVPEYGDDAKL 65 Query: 48 ----------PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ ++ + + + + D GFPC +S G Sbjct: 66 VESAADLPAAGGGVVHQNVHTLDIEALGEIDGFAFGFPCNDYSLVG 111 >gi|308805851|ref|XP_003080237.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri] gi|116058697|emb|CAL54404.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri] Length = 382 Score = 64.0 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 7/82 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI- 64 +L+ GIG RL LE + +++ + + + + Y+ANF + +I + + Sbjct: 39 ELYSGIGATRLALE---HLVDLQDVVAIDNSDAANAVYEANFGDVPRRANIEHLDANALF 95 Query: 65 --PDHD-VLLAGFPCQPFSQAG 83 + D L A PCQP+++ G Sbjct: 96 PSSERDYALTASPPCQPYTRRG 117 >gi|323485262|ref|ZP_08090612.1| cytosine-specific methyltransferase [Clostridium symbiosum WAL-14163] gi|323401440|gb|EGA93788.1| cytosine-specific methyltransferase [Clostridium symbiosum WAL-14163] Length = 335 Score = 64.0 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+I +LF GIG R+ L +V+ EI+ +V++Y A F + + Sbjct: 7 LQILELFGGIGSPRVALRNIG--VSVKSIDYVEIDEKAVRSYNAMFEQESAYSPQTVVGW 64 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 P D+L+ G PCQ FS AG Sbjct: 65 NLQP--DILIHGSPCQDFSIAG 84 >gi|315029938|gb|EFT41870.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX4000] Length = 317 Score = 64.0 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++I +LF GIG R L + E N +V++Y A F + + + + Sbjct: 1 MIQILELFGGIGAPRKALINLGIPH--KSIDYVEWNEKAVRSYNAMFEKEIKYQPQSVVG 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 P D+L+ G PCQ FS G Sbjct: 59 WNLKP--DILVHGSPCQDFSIGG 79 >gi|288799842|ref|ZP_06405301.1| modification methylase BepI (Cytosine-specific methyltransferase BepI) [Prevotella sp. oral taxon 299 str. F0039] gi|288333090|gb|EFC71569.1| modification methylase BepI (Cytosine-specific methyltransferase BepI) [Prevotella sp. oral taxon 299 str. F0039] Length = 406 Score = 64.0 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 18/78 (23%) Query: 23 NHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----------------KTQDIP- 65 + E F+++INPY+ +T+ F N DI++I + +P Sbjct: 36 KETDFETIFANDINPYAKRTWVDYF-NRKRKQDISEIYILDSIVDIVKKYRNGEISILPI 94 Query: 66 DHDVLLAGFPCQPFSQAG 83 + D++ GFPCQ FS AG Sbjct: 95 NVDIVTGGFPCQDFSVAG 112 >gi|15236318|ref|NP_193097.1| MEE57 (maternal effect embryo arrest 57); DNA (cytosine-5-)-methyltransferase/ DNA binding / protein binding [Arabidopsis thaliana] gi|4678387|emb|CAB41119.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis thaliana] gi|7268065|emb|CAB78403.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis thaliana] gi|332657902|gb|AEE83302.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana] Length = 1404 Score = 64.0 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 39/122 (31%), Gaps = 48/122 (39%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ LE+ + ++ E + + ++ N P T +F Sbjct: 972 LDIFAGCGGLSYGLEKAGVS---DTKWAIEYEEPAAQAFKQNHPKTTVFVDNCNVILRIS 1028 Query: 54 ---------------GDI-------------AKIKTQ---DIP---DHDVLLAGFPCQPF 79 GD+ K+ +P D + G PCQ F Sbjct: 1029 WLRLLINDRAIMEKCGDVDDCISTTEAAELATKLDENQKSTLPLPGQVDFISGGPPCQGF 1088 Query: 80 SQ 81 S+ Sbjct: 1089 SR 1090 >gi|113478056|ref|YP_724117.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] gi|110169104|gb|ABG53644.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101] Length = 345 Score = 64.0 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG GG+ E+ N +I+P Y+ N I + I++ ++ Sbjct: 7 IDLFCGAGGLTHGFEKAGLPVN---VGY-DIDPVCKFPYEYNNKAKFILKSVEDIESMEL 62 Query: 65 PDHD------VLLAGFPCQPFS 80 H VL PCQPFS Sbjct: 63 AKHFPICHLKVLAGCSPCQPFS 84 >gi|302521589|ref|ZP_07273931.1| DNA methylase [Streptomyces sp. SPB78] gi|302430484|gb|EFL02300.1| DNA methylase [Streptomyces sp. SPB78] Length = 401 Score = 64.0 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 6/80 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 I DLF G GG+ + + E++ + T + GD+ + Sbjct: 6 IIDLFAGPGGLDI----AAKVLGIPSVG-IELDDDACAT-RTAAGLVTKQGDVCDFSATN 59 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 P VL G PCQ ++ AG Sbjct: 60 FPAATVLTGGPPCQTYTVAG 79 >gi|302520399|ref|ZP_07272741.1| DNA cytocine methyl transferase [Streptomyces sp. SPB78] gi|302429294|gb|EFL01110.1| DNA cytocine methyl transferase [Streptomyces sp. SPB78] Length = 434 Score = 64.0 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 20/98 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN---PY-------SVKTYQANFPNTL 51 + DLF G GG+ H + E ++++ P TY+AN Sbjct: 38 YTVVDLFSGGGGMSYGFHA---HPSFEMRGAADVEVGKPSTGHGAIGCNATYEANIGVKP 94 Query: 52 IFGDIAKIKTQDIP-------DHDVLLAGFPCQPFSQA 82 + D+A I+ ++ DVLLA PC FS+A Sbjct: 95 MAVDLAAIEADELAAQVAPPGGVDVLLACPPCTGFSRA 132 >gi|46906547|ref|YP_012936.1| C-5 cytosine-specific DNA methylase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|46879812|gb|AAT03113.1| C-5 cytosine-specific DNA methylase family protein [Listeria monocytogenes serotype 4b str. F2365] Length = 469 Score = 63.6 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 14/95 (14%) Query: 2 LKITDLFCGIGGIRLDLE---QTFNHRNVECFFSSEIN--PYSVKTYQ---ANFPN-TLI 52 L I +F G+GG + L + +S++ + Y+ FP I Sbjct: 3 LNIFSMFDGVGGFIVGLNDANEAIEKEMFRTTYSNQFEPSKKAQDAYEVGLYRFPEMNHI 62 Query: 53 FGDIAKIKTQDIPD-HD----VLLAGFPCQPFSQA 82 DI + + HD +++ GFPCQ +S A Sbjct: 63 PDDIMTVSDNKFQEMHDAGVNMIVGGFPCQDYSVA 97 >gi|309799879|ref|ZP_07694084.1| DNA-cytosine methyltransferase [Streptococcus infantis SK1302] gi|308116469|gb|EFO53940.1| DNA-cytosine methyltransferase [Streptococcus infantis SK1302] Length = 412 Score = 63.6 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 37/130 (28%), Gaps = 52/130 (40%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT------------------- 42 DLF G GG+ Q E+NP++ +T Sbjct: 11 YNFIDLFAGAGGLSEGFIQA----GFNPIAHVEMNPFAAQTLVTRSSYYYLKQAKQLDIY 66 Query: 43 YQANFPNTL----------------------------IFGDIAKI-KTQDIPDHDVLLAG 73 YQ IF I I K ++I DV++ G Sbjct: 67 YQYLRGEMTQEEFLQKIPKRIKKTVICETMSDTTLPSIFKTIDGIMKIRNIQSVDVVIGG 126 Query: 74 FPCQPFSQAG 83 PCQ +S G Sbjct: 127 PPCQSYSLVG 136 >gi|62946656|gb|AAY22439.1| methylase [Listeria monocytogenes] Length = 469 Score = 63.6 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 14/95 (14%) Query: 2 LKITDLFCGIGGIRLDLE---QTFNHRNVECFFSSEIN--PYSVKTYQ---ANFPN-TLI 52 L I +F G+GG + L + +S++ + Y+ FP I Sbjct: 3 LNIFSMFDGVGGFIVGLNDANEAIEKEMFRTTYSNQFEPSKKAQDAYEVGVYRFPEMNHI 62 Query: 53 FGDIAKIKTQDIPD-HD----VLLAGFPCQPFSQA 82 DI + + HD +++ GFPCQ +S A Sbjct: 63 PDDIMTVSDNKFQEMHDAGVNMIVGGFPCQDYSVA 97 >gi|326441740|ref|ZP_08216474.1| C-5 cytosine-specific DNA methylase [Streptomyces clavuligerus ATCC 27064] Length = 187 Score = 63.6 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 I L G GG+ L ++ + ++ P + + ++P GDI+ + D Sbjct: 13 IGSLCSGYGGLDLGVQSV---LGGRMAWHADTAPGASRILARHWPGVPNLGDISVVSWAD 69 Query: 64 IPDHDVLLAGFPCQ 77 + VL AGFPCQ Sbjct: 70 VQGVCVLTAGFPCQ 83 >gi|33338827|gb|AAQ14149.1| Dmt, incomplete [Enterobacteria phage P1] Length = 638 Score = 63.6 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----D 63 GI + + + +EI P+ +P+ GD+ K+ + + Sbjct: 10 CSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLAHRWPHVANLGDMTKLAKKVLAGE 65 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 I DVL+ G PCQ FS AG Sbjct: 66 IESPDVLVWGTPCQAFSIAG 85 >gi|288801950|ref|ZP_06407391.1| modification methylase HgiDII (Cytosine-specific methyltransferase HgiDII) [Prevotella melaninogenica D18] gi|288335385|gb|EFC73819.1| modification methylase HgiDII (Cytosine-specific methyltransferase HgiDII) [Prevotella melaninogenica D18] Length = 355 Score = 63.6 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 18/95 (18%) Query: 1 ML----KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGD 55 M+ K D CG GG+ L Q + + + + +TY+ N P ++ I + Sbjct: 1 MMASKYKAIDFLCGGGGMTCGLRQA----GINVIAGVDFDQDAKETYEYNNPGSVFIQKN 56 Query: 56 IAKIKTQ------DIPDHD---VLLAGFPCQPFSQ 81 I +++ +I +D +L+ PCQ +S Sbjct: 57 IKNLRSNYFERKFEIRKNDDFLILVGCSPCQFYSI 91 >gi|462658|sp|P34878|MTSB_LACLC RecName: Full=Modification methylase ScrFIB; Short=M.ScrFI-B; Short=M.ScrFIB; AltName: Full=Cytosine-specific methyltransferase ScrFIB gi|149495|gb|AAA16838.1| methyl-5-cytosine methylase [Lactococcus lactis] gi|2327032|gb|AAB66694.1| 5-methyl-cytosine-methyltransferase [Lactococcus lactis subsp. cremoris] gi|739995|prf||2004282A methyl-5-cytosine methyltransferase Length = 360 Score = 63.6 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 39/136 (28%), Gaps = 55/136 (40%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----------- 49 ML++ + F G G RL L + + E SEI + +Y A N Sbjct: 1 MLRVFEAFAGYGSQRLALIKA--NIPHEIVGISEIEGDVLLSYSAIHENLLEERNKNIKL 58 Query: 50 ------------------------------------------TLIFGDIAKIKTQDIPDH 67 FGDI I + +PD Sbjct: 59 TDDEMRDYLKNINIPLDYKTFENRADKLGGQKLKDMYIANKLNKNFGDIRSIDPKKLPDF 118 Query: 68 DVLLAGFPCQPFSQAG 83 D FPCQ S AG Sbjct: 119 DFFTYSFPCQDISVAG 134 >gi|317148994|ref|XP_001823049.2| C-5 cytosine methyltransferase DmtA [Aspergillus oryzae RIB40] Length = 614 Score = 63.6 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI- 59 D FCG GG+ + + ++ + + ++ TY+ NF + DI Sbjct: 316 YTFGDGFCGAGGVSCGARRAGLYNK----WAFDNSEHATSTYRLNFEHAYCELSDIFSFL 371 Query: 60 -KTQDIPDHDVLLAGFPCQPFSQA 82 + DV + PCQ +S A Sbjct: 372 TSNDEFLRVDVSHSSPPCQTWSSA 395 >gi|238494284|ref|XP_002378378.1| C-5 cytosine methyltransferase DmtA [Aspergillus flavus NRRL3357] gi|220695028|gb|EED51371.1| C-5 cytosine methyltransferase DmtA [Aspergillus flavus NRRL3357] Length = 468 Score = 63.6 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI- 59 D FCG GG+ + + ++ + + ++ TY+ NF + DI Sbjct: 304 YTFGDGFCGAGGVSCGARRAGLYNK----WAFDNSEHATSTYRLNFEHAYCELSDIFSFL 359 Query: 60 -KTQDIPDHDVLLAGFPCQPFSQA 82 + DV + PCQ +S A Sbjct: 360 TSNDEFLRVDVSHSSPPCQTWSSA 383 >gi|83771786|dbj|BAE61916.1| unnamed protein product [Aspergillus oryzae] Length = 586 Score = 63.6 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI- 59 D FCG GG+ + + ++ + + ++ TY+ NF + DI Sbjct: 316 YTFGDGFCGAGGVSCGARRAGLYNK----WAFDNSEHATSTYRLNFEHAYCELSDIFSFL 371 Query: 60 -KTQDIPDHDVLLAGFPCQPFSQA 82 + DV + PCQ +S A Sbjct: 372 TSNDEFLRVDVSHSSPPCQTWSSA 395 >gi|83310257|ref|YP_420521.1| site-specific DNA methylase [Magnetospirillum magneticum AMB-1] gi|82945098|dbj|BAE49962.1| Site-specific DNA methylase [Magnetospirillum magneticum AMB-1] Length = 620 Score = 63.6 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 5/77 (6%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP-D 66 GI + + F +EI P+ +P GD+ I Sbjct: 28 CSGI----EAATAAWEPLGWQAAFFAEIEPFPSTVLAHRYPAIPNLGDMTAIDGLAWRGK 83 Query: 67 HDVLLAGFPCQPFSQAG 83 DVL+ G PCQ FS AG Sbjct: 84 IDVLVGGTPCQAFSVAG 100 >gi|258611549|ref|ZP_05233453.2| methylase [Listeria monocytogenes FSL N3-165] gi|258601173|gb|EEW14498.1| methylase [Listeria monocytogenes FSL N3-165] Length = 469 Score = 63.6 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 14/95 (14%) Query: 2 LKITDLFCGIGGIRLDLE---QTFNHRNVECFFSSEIN--PYSVKTYQ---ANFPN-TLI 52 L I +F G+GG + L + +S++ + Y+ FP I Sbjct: 3 LNIFSMFDGVGGFIVGLNDANEAIEKEMFRTTYSNQFEPSKKAQDAYEVGVYRFPEMNHI 62 Query: 53 FGDIAKIKTQDIPD-HD----VLLAGFPCQPFSQA 82 DI + + HD +++ GFPCQ +S A Sbjct: 63 PDDIMTVSDNKFQEMHDAGVNMIVGGFPCQDYSVA 97 >gi|333025812|ref|ZP_08453876.1| putative C-5 cytosine-specific DNA methylase [Streptomyces sp. Tu6071] gi|332745664|gb|EGJ76105.1| putative C-5 cytosine-specific DNA methylase [Streptomyces sp. Tu6071] Length = 503 Score = 63.2 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L TDLFCG GG L ++ +V+T+ AN P + D+ Sbjct: 3 LTFTDLFCGAGGSSTGLVAAGYDLR---LAANHW-QRAVETHAANHPGADHLCADVNNYD 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + +P DVL A C S AG Sbjct: 59 MRRLPRTDVLWASPICTEISPAG 81 >gi|315222611|ref|ZP_07864500.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211] gi|315188297|gb|EFU22023.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211] Length = 317 Score = 63.2 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 3/82 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + +LF GIG I+ L + + EI+ VK+Y A + I Sbjct: 6 LNVLELFGGIGAIKKALIR--QKIPHKTLDYVEIDKNCVKSYNALYNTDFKPKSILDFHP 63 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 D D+L+ G PCQ FS++G Sbjct: 64 PD-KRIDLLMHGSPCQDFSRSG 84 >gi|190571759|ref|YP_001966438.1| M2.LlaJI [Lactococcus lactis] gi|46487640|gb|AAS99178.1| M2.LlaJI [Lactococcus lactis] Length = 379 Score = 63.2 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L+ LF +G E + V+ ++EI+ + YQ +PNT +I GDI + Sbjct: 4 LRGLSLFANVG----IAEAFLDEIGVDIKIANEIDKERARFYQDVYPNTNMICGDITEDT 59 Query: 61 TQDI-------PDHDVLLAGFPCQPFSQAG 83 T+D+ D D ++A PCQ S+AG Sbjct: 60 TRDLIVDLAIKEDVDFVIATPPCQGMSEAG 89 >gi|261414304|gb|ACX83570.1| DNA methyltransferase [Hieracium pilosella] Length = 1569 Score = 63.2 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 39/114 (34%), Gaps = 37/114 (32%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF------- 53 +LK D+F G GG+ L + ++ E + ++ N P L F Sbjct: 1127 ILKTLDIFAGCGGLSEGLTKAGASV---TKWAIEYEEPAGDAFRLNHPEALAFVHNCNVI 1183 Query: 54 --------GDI-------------AKIKTQDIPD------HDVLLAGFPCQPFS 80 GD+ AK+ + I + D + G PCQ FS Sbjct: 1184 LRAIMTACGDVDDCISTTEADEQAAKLDEEMIKNLPRPGQVDFINGGPPCQGFS 1237 >gi|261414302|gb|ACX83569.1| DNA methyltransferase [Hieracium piloselloides] Length = 1547 Score = 63.2 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 39/114 (34%), Gaps = 37/114 (32%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF------- 53 +LK D+F G GG+ L + ++ E + ++ N P L F Sbjct: 1106 ILKTLDIFAGCGGLSEGLTKAGASV---TKWAIEYEEPAGDAFRLNHPEALAFVHNCNVI 1162 Query: 54 --------GDI-------------AKIKTQDIPD------HDVLLAGFPCQPFS 80 GD+ AK+ + I + D + G PCQ FS Sbjct: 1163 LRAIMTACGDVDDCISTTEADEQAAKLDEEMIKNLPRPGQVDFINGGPPCQGFS 1216 >gi|155370987|ref|YP_001426521.1| hypothetical protein ATCV1_Z040R [Acanthocystis turfacea Chlorella virus 1] gi|155124307|gb|ABT16174.1| hypothetical protein ATCV1_Z040R [Acanthocystis turfacea Chlorella virus 1] Length = 349 Score = 63.2 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 8/76 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K +LF G+GGI L V+ E + + A + GD+ + Sbjct: 1 MKALELFAGVGGITHGL-----RGYVKPVAFVEYEKDAAEFLAAR--GKPVHGDVKEFDA 53 Query: 62 QDIP-DHDVLLAGFPC 76 + + D++ AG+PC Sbjct: 54 TEYRGNIDIVTAGWPC 69 >gi|119467548|ref|XP_001257580.1| C-5 cytosine methyltransferase DmtA [Neosartorya fischeri NRRL 181] gi|119405732|gb|EAW15683.1| C-5 cytosine methyltransferase DmtA [Neosartorya fischeri NRRL 181] Length = 632 Score = 63.2 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIA--- 57 D FCG GG+ + H ++ + + ++ TY+ NF + DI Sbjct: 324 YTFGDGFCGAGGVSCGASKAGLH----IKWAFDKSENAITTYRLNFATAVCEACDIFCFL 379 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82 K +D+ DV PCQ FS A Sbjct: 380 TNKPEDL-KVDVSHGSPPCQTFSPA 403 >gi|291539768|emb|CBL12879.1| Site-specific DNA methylase [Roseburia intestinalis XB6B4] Length = 211 Score = 63.2 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 23/88 (26%) Query: 2 LKITDLFCG---IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 +K+ +LF G IG + F R E FS E + F N ++ DI+K Sbjct: 1 MKVLELFAGTRSIG-------KAFESRGHE-VFSVEWSKD--------FENIDLYEDISK 44 Query: 59 IKTQDI----PDHDVLLAGFPCQPFSQA 82 + +DI DV+ A C FS A Sbjct: 45 VTAEDILRLFGKPDVIWASPDCSTFSIA 72 >gi|257413708|ref|ZP_04743935.2| conserved hypothetical protein [Roseburia intestinalis L1-82] gi|257202598|gb|EEV00883.1| conserved hypothetical protein [Roseburia intestinalis L1-82] Length = 212 Score = 63.2 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 23/88 (26%) Query: 2 LKITDLFCG---IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 +K+ +LF G IG + F R E FS E + F N ++ DI+K Sbjct: 1 MKVLELFAGTRSIG-------KAFEQRGHE-VFSVEWSKD--------FENIDLYEDISK 44 Query: 59 IKTQDI----PDHDVLLAGFPCQPFSQA 82 + +DI DV+ A C FS A Sbjct: 45 VTAEDILKLFGKPDVIWASPDCATFSIA 72 >gi|254518451|ref|ZP_05130507.1| DNA-cytosine methyltransferase [Clostridium sp. 7_2_43FAA] gi|226912200|gb|EEH97401.1| DNA-cytosine methyltransferase [Clostridium sp. 7_2_43FAA] Length = 413 Score = 63.2 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 39/124 (31%), Gaps = 49/124 (39%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA------------------- 45 DLF G GG+ ++ + + F E++ + T Q Sbjct: 10 IDLFAGAGGLSEGFQR----KGFKFFAHVEMDKAACMTLQTRQAFYFLKRNRRLYIYESY 65 Query: 46 ------------NFPNTLIFGDI-AKIKTQDIPD-------------HDVLLAGFPCQPF 79 N PN + I A+I I D DV++ G PCQ + Sbjct: 66 LRGEISREELYSNVPNRIFKSIINAEINEDTIEDVFEKIDENRRNREVDVIIGGPPCQAY 125 Query: 80 SQAG 83 S G Sbjct: 126 SVIG 129 >gi|190410730|ref|YP_001966068.1| DNA-cytosine methyltransferase [Thermus sp. 4C] gi|133753293|gb|ABO38149.1| M.TspMI [Thermus sp. manalii] gi|148608604|gb|ABQ95624.1| DNA-cytosine methyltransferase [Thermus sp. 4C] Length = 437 Score = 63.2 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 24/101 (23%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN---------------PYSVKTYQANFP 48 + DLF G GG+ + + + + ++ TY+AN Sbjct: 36 VVDLFSGAGGMSYGFKYWGDRL-YKIIGAVDLEVAKPSDSKAKKGGGGTNCNATYEANIG 94 Query: 49 NTLIFGDIAKIKTQDIPDH--------DVLLAGFPCQPFSQ 81 + DI ++ ++ ++ VL++ PC FSQ Sbjct: 95 IRPLKADITELNPREYRENLGLEVGQLGVLISCAPCTGFSQ 135 >gi|112983430|ref|NP_001036980.1| DNA cytosine-5 methyltransferase [Bombyx mori] gi|54888739|dbj|BAD67189.1| DNA cytosine-5 methyltransferase [Bombyx mori] Length = 1409 Score = 63.2 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56 L+ D+F G GG+ L Q EC ++ E + Y N + ++F + Sbjct: 946 LRTLDVFAGCGGLSEGLHQAGVA---ECKWAIENVEAASHAYSLNNKSCIVFNEDCNALL 1002 Query: 57 ------AKIKTQDIP-----DHDVLLAGFPCQPFS 80 AK + + ++L G PCQ FS Sbjct: 1003 KTVMSGAKHSANGLRLPMQGEVELLCGGPPCQGFS 1037 >gi|94263940|ref|ZP_01287743.1| DNA (cytosine-5-)-methyltransferase [delta proteobacterium MLMS-1] gi|93455685|gb|EAT05864.1| DNA (cytosine-5-)-methyltransferase [delta proteobacterium MLMS-1] Length = 366 Score = 63.2 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 13/87 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 + D FCG GG ++ ++ F+ + P + T++ NFP T I ++ Sbjct: 12 VFDFFCGCGGTSRGFQKA----GIDVAFALDTGPDAKSTFERNFPGTFFCHKSINELNAS 67 Query: 63 DIPDH--------DVLLAGFPCQPFSQ 81 D+ + PCQPF++ Sbjct: 68 DLEPILQAHKNGYKLFCGCAPCQPFTR 94 >gi|46401691|ref|YP_006537.1| Dmt [Enterobacteria phage P1] gi|33338718|gb|AAQ14041.1| Dmt [Enterobacteria phage P1] Length = 754 Score = 63.2 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----D 63 GI + + + +EI P+ +P+ GD+ K+ + + Sbjct: 10 CSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLAHRWPHVANLGDMTKLAKKVLAGE 65 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 I DVL+ G PCQ FS AG Sbjct: 66 IESPDVLVWGTPCQAFSIAG 85 >gi|333024773|ref|ZP_08452837.1| putative DNA-cytosine methyltransferase [Streptomyces sp. Tu6071] gi|332744625|gb|EGJ75066.1| putative DNA-cytosine methyltransferase [Streptomyces sp. Tu6071] Length = 386 Score = 62.9 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 5/80 (6%) Query: 6 DLFCGIGGIRLDLEQ----TFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 DLF G GG + E++P + TY ANFP+ + I Sbjct: 2 DLFAGAGGFSAGFHAYRPDGPASSPFRTLAAVEMDPAAAATYAANFPSAKVSAIRIEGWD 61 Query: 61 TQDIPDHDVLLAGFPCQPFS 80 DV++ G PCQ FS Sbjct: 62 PTPYEGVDVIMGGPPCQGFS 81 >gi|251773224|gb|EES53775.1| Site-specific DNA methylase-like protein [Leptospirillum ferrodiazotrophum] Length = 154 Score = 62.9 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 ++ G GG L LEQ + E++ ++ + + N P +I G++ K Sbjct: 5 LEICAGAGGQALGLEQA----GFDHSALVELDHHACASLRLNRPGWNVIEGNLQSFKGTP 60 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D+L G PC PFS+ G Sbjct: 61 FKGIDLLAGGVPCPPFSKDG 80 >gi|326955261|gb|AEA28956.1| C-5 cytosine-specific DNA methylase [Pseudonocardia dioxanivorans CB1190] Length = 595 Score = 62.9 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPN-TLIFGDIAKI 59 + +TDLFCG GG E V+ + + +++T+ N P+ DIA+ Sbjct: 1 MTVTDLFCGAGGSSSGAESV---PGVKVRMACNHWDK-AIETHNFNMPHADHDIADIAET 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 + P D+L A C +SQA Sbjct: 57 DPRRYPHTDLLWASPSCTFWSQA 79 >gi|322380155|ref|ZP_08054396.1| putative cytosine-specific DNA methyltransferase (DDEM) [Helicobacter suis HS5] gi|321147420|gb|EFX42079.1| putative cytosine-specific DNA methyltransferase (DDEM) [Helicobacter suis HS5] Length = 100 Score = 62.9 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 7/77 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 K+ D+FCG GG+ Q + + ++ + + ++ +Y++N P T I DI ++ Sbjct: 4 FKLADIFCGAGGLSYGFAQ---NALFDLVWALDYDLDALASYKSNHPTTNTICRDIVQLS 60 Query: 61 TQD---IPDHDVLLAGF 74 ++ D+LL G Sbjct: 61 REECLGYGPIDILLGGP 77 >gi|311104267|ref|YP_003977120.1| methyltransferase [Achromobacter xylosoxidans A8] gi|310758956|gb|ADP14405.1| cytosine-specific methyltransferase [Achromobacter xylosoxidans A8] Length = 536 Score = 62.9 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----KIKTQD 63 GI + + ++E + +EI P+ +P GD+ +++ Sbjct: 20 CSGI----EAVSLAWQPLDLEAAWFAEIEPFPSAVLAHRYPRVPNLGDMTAIARQVRAGT 75 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P D+L+ G PCQ FS AG Sbjct: 76 VPAPDILVGGTPCQSFSVAG 95 >gi|261736049|ref|YP_003257391.1| putative 5-methylcytosine methyltransferase [Streptomyces sp. ZL12] gi|261349172|gb|ACX71104.1| putative 5-methylcytosine methyltransferase [Streptomyces sp. ZL12] Length = 348 Score = 62.9 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 6/80 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 I DLF G GG + + ++ E + + +T +A I GD+ D Sbjct: 2 ILDLFAGPGGWDVAATR----LGLDVIG-IEHDHSACETRRA-AGLATIEGDVRSYGVAD 55 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 P L+ PCQ FS AG Sbjct: 56 FPAAQRLIGSPPCQSFSVAG 75 >gi|158321055|ref|YP_001513562.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs] gi|158141254|gb|ABW19566.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs] Length = 448 Score = 62.9 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 39/147 (26%), Gaps = 69/147 (46%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT------------------- 42 + + DLF G GG+ + + E E + ++ +T Sbjct: 1 MVVIDLFSGAGGLTEGFMR----QGFEIVAHVEKDKWACETLKTRIIYHFLKSKNDLEIY 56 Query: 43 --------------------YQAN---------------FPNTLIFGDIAKIKT------ 61 Y+ F N L ++ I Sbjct: 57 FDYFKRVNGYRNIEESRQTIYRKYPEIKEKLQYEVLNKAFGNPLEEKNVTGIDEIIELLE 116 Query: 62 -----QDIPDHDVLLAGFPCQPFSQAG 83 ++ D+++ G PCQ +S G Sbjct: 117 DSLKYKNYSSTDLIIGGPPCQAYSLVG 143 >gi|212639806|ref|YP_002316326.1| Site-specific DNA methylase [Anoxybacillus flavithermus WK1] gi|212561286|gb|ACJ34341.1| Site-specific DNA methylase [Anoxybacillus flavithermus WK1] Length = 469 Score = 62.9 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 43/119 (36%), Gaps = 40/119 (33%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--------- 51 M DLF G GG+ ++ + E++ ++V+TY A+ + Sbjct: 24 MFTSIDLFAGPGGLATGFM----WSGIKPLIAVEMSYWTVQTYSASHNAEIFDLESFLSG 79 Query: 52 -----------------IFGDIAKIKTQDIPD----------HDVLLAGFPCQPFSQAG 83 I+GDI K+ + I D++ G PC+ FS AG Sbjct: 80 EMKDPDQFFRKSDRTLIIYGDINKVSNELISKILKQRFGVDSVDIVTGGAPCESFSMAG 138 >gi|256392223|ref|YP_003113787.1| C-5 cytosine-specific DNA methylase [Catenulispora acidiphila DSM 44928] gi|256358449|gb|ACU71946.1| C-5 cytosine-specific DNA methylase [Catenulispora acidiphila DSM 44928] Length = 483 Score = 62.9 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + TD+FCG GG L E ++ + ++ T+ AN N + D+ Sbjct: 3 ITFTDIFCGAGGSSTGLVAA----GFELKLAANHSKVAISTHAANHGNAEHVCADVNNYD 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83 + +P DVL A C S AG Sbjct: 59 MRRLPTTDVLWASPICTEISPAG 81 >gi|269955376|ref|YP_003325165.1| C-5 cytosine-specific DNA methylase [Xylanimonas cellulosilytica DSM 15894] gi|269304057|gb|ACZ29607.1| C-5 cytosine-specific DNA methylase [Xylanimonas cellulosilytica DSM 15894] Length = 553 Score = 62.9 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 L +TDLFCG GG + V+ ++ + +++T+ N P+ + DI++ Sbjct: 39 LTLTDLFCGAGGSSTG---AVSVPGVQVRLAANHWDK-AIETHNTNHPDVDHLQADISQT 94 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 + +P D+L A C S+A Sbjct: 95 DPRYVPRTDMLWASPECTNHSRA 117 >gi|259046940|ref|ZP_05737341.1| modification methylase Sau3AI (cytosine-specificmethyltransferase Sau3AI) [Granulicatella adiacens ATCC 49175] gi|259036383|gb|EEW37638.1| modification methylase Sau3AI (cytosine-specificmethyltransferase Sau3AI) [Granulicatella adiacens ATCC 49175] Length = 451 Score = 62.9 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 14/95 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINP--YSVKTYQ---ANFPN-TLI 52 LK+ +F G+GG + L++ N + +++ P + ++ N+P Sbjct: 11 LKVFSMFDGVGGFIVGLDEANRKLNKKFFQVTDTNQFEPSRKAQDAFEVGVYNYPKINHS 70 Query: 53 FGDIAKIKTQDIPD-----HDVLLAGFPCQPFSQA 82 DI ++ ++ + ++++ GFPCQ +S A Sbjct: 71 NEDIMQVSSEYFDEMKANGVNMIVGGFPCQDYSVA 105 >gi|52786706|ref|YP_092535.1| hypothetical protein BLi02974 [Bacillus licheniformis ATCC 14580] gi|319647238|ref|ZP_08001460.1| hypothetical protein HMPREF1012_02499 [Bacillus sp. BT1B_CT2] gi|52349208|gb|AAU41842.1| putative protein [Bacillus licheniformis ATCC 14580] gi|317390585|gb|EFV71390.1| hypothetical protein HMPREF1012_02499 [Bacillus sp. BT1B_CT2] Length = 256 Score = 62.9 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 10/88 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60 LK+ F GG + + + + EI+P +K Y+ N P DI Sbjct: 21 LKVFSTFSWGGGSSMG----YKLAGYDLLGNCEIDPQMMKIYRKNHNPIYPFLMDIRDFN 76 Query: 61 -----TQDIPDHDVLLAGFPCQPFSQAG 83 ++ D D+ PC FS AG Sbjct: 77 KMENLPDELFDLDIFDGSPPCSVFSIAG 104 >gi|225375639|ref|ZP_03752860.1| hypothetical protein ROSEINA2194_01264 [Roseburia inulinivorans DSM 16841] gi|225212496|gb|EEG94850.1| hypothetical protein ROSEINA2194_01264 [Roseburia inulinivorans DSM 16841] Length = 211 Score = 62.9 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 23/88 (26%) Query: 2 LKITDLFCG---IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 +K+ +LF G IG + F R E FS E + F N ++ DI K Sbjct: 1 MKVLELFAGTRSIG-------KAFESRGHE-VFSVEWSKD--------FENIDLYEDINK 44 Query: 59 IKTQDI----PDHDVLLAGFPCQPFSQA 82 + +DI DV+ A C FS A Sbjct: 45 VTAEDIIRLFGKPDVIWASPDCSTFSIA 72 >gi|254825117|ref|ZP_05230118.1| DNA-cytosine methyltransferase [Listeria monocytogenes FSL J1-194] gi|293594360|gb|EFG02121.1| DNA-cytosine methyltransferase [Listeria monocytogenes FSL J1-194] Length = 326 Score = 62.9 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 6/82 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LKI +LF GIG R L + EI+ +V+ Y A + T+ + Sbjct: 4 LKILELFGGIGAPRKALINLGIEH--KSIDYVEIDEKAVRAYNALYDKTIQPQSVVGYNL 61 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 + D+L+ G PCQ FS+AG Sbjct: 62 R----PDLLIHGSPCQDFSRAG 79 >gi|2906004|gb|AAC03766.1| C5-DNA-methyltransferase [Ascobolus immersus] Length = 1356 Score = 62.9 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 29/105 (27%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54 LK D+F G GG+ L L+ + V+ + E P + T NFP+ +F Sbjct: 784 LKGLDIFAGCGGLTLGLDLSGA---VDTKWDIEFAPSAANTLALNFPDAQVFNQCANVLL 840 Query: 55 ------------DIA-KIKTQDIPD------HDVLLAGFPCQPFS 80 DI ++ + +PD D + G PCQ FS Sbjct: 841 SRAIQSEDEGSLDIEYDLQGRVLPDLPKKGEVDFIYGGPPCQGFS 885 >gi|262200549|ref|YP_003271757.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247] gi|262083896|gb|ACY19864.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247] Length = 399 Score = 62.5 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--------TLIF 53 ++ +LF L + +E + +S T + N + Sbjct: 1 MRSVELFA----GGGGLTLGTHLAGFTTEVVAEWDRWSCDTLRENRDGGYPLVRDIDVEE 56 Query: 54 GDIAKIKTQDIPD-HDVLLAGFPCQPFSQAG 83 GD+ + +P+ D++ G PCQPFS G Sbjct: 57 GDVRYVDWSSVPEGIDLVSGGPPCQPFSAGG 87 >gi|70984380|ref|XP_747703.1| C-5 cytosine methyltransferase DmtA [Aspergillus fumigatus Af293] gi|66845330|gb|EAL85665.1| C-5 cytosine methyltransferase DmtA [Aspergillus fumigatus Af293] Length = 628 Score = 62.5 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 D FCG GG+ + H ++ + + ++ TY+ NF + DI Sbjct: 324 YTFGDGFCGAGGVSCGASKAGLH----IKWAFDKSENAITTYRLNFATAVCEACDIFCFL 379 Query: 61 TQDIPD--HDVLLAGFPCQPFSQA 82 T + + DV PCQ FS A Sbjct: 380 TNKLEELKVDVSHGSPPCQTFSPA 403 >gi|198475758|ref|XP_001357145.2| GA10499 [Drosophila pseudoobscura pseudoobscura] gi|198137946|gb|EAL34212.2| GA10499 [Drosophila pseudoobscura pseudoobscura] Length = 347 Score = 62.5 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ +LF GIGG+ + + + ++N + Y NF + +I + Sbjct: 3 FRVLELFSGIGGMHYAFKYA--QLDGNIVAAMDVNTVANAVY--NFALNCHVKTRNIQSL 58 Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83 +++ +LL PCQP ++ G Sbjct: 59 SEKEVSKLGATMLLMSPPCQPHTRQG 84 >gi|195160038|ref|XP_002020883.1| GL16217 [Drosophila persimilis] gi|194117833|gb|EDW39876.1| GL16217 [Drosophila persimilis] Length = 347 Score = 62.5 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 ++ +LF GIGG+ + + + ++N + Y NF + +I + Sbjct: 3 FRVLELFSGIGGMHYAFKYA--QLDGNIVAAMDVNTVANAVY--NFALNCHVKTRNIQSL 58 Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83 +++ +LL PCQP ++ G Sbjct: 59 SEKEVSKLGATMLLMSPPCQPHTRQG 84 >gi|257877766|ref|ZP_05657419.1| C-5 cytosine-specific DNA methylase [Enterococcus casseliflavus EC20] gi|257811932|gb|EEV40752.1| C-5 cytosine-specific DNA methylase [Enterococcus casseliflavus EC20] Length = 416 Score = 62.5 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 36/111 (32%), Gaps = 39/111 (35%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT------------YQA----NFP 48 +LF G GG+ EQT E + E V+T Y + NF Sbjct: 7 IELFAGAGGLLDGFEQTGF---YELLGAVEWMKPQVRTLINRLENKYDDQYASEKVLNFD 63 Query: 49 ----NTLIFGDIAKIKTQDI------------PDHDVLLAGFPCQPFSQAG 83 + L+ G + DV+ G PCQ +S AG Sbjct: 64 IQRTDELLHG----WDDDEFGFNTGLDSLVGNRKVDVISGGPPCQAYSLAG 110 >gi|159122489|gb|EDP47610.1| C-5 cytosine methyltransferase DmtA [Aspergillus fumigatus A1163] Length = 628 Score = 62.5 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 D FCG GG+ + H ++ + + ++ TY+ NF + DI Sbjct: 324 YTFGDGFCGAGGVSCGASKAGLH----IKWAFDKSENAITTYRLNFATAVCEACDIFCFL 379 Query: 61 TQDIPD--HDVLLAGFPCQPFSQA 82 T + + DV PCQ FS A Sbjct: 380 TNKLEELKVDVSHGSPPCQTFSPA 403 >gi|29832079|ref|NP_826713.1| type II restriction-modification system DNA cytosine-specific methylase [Streptomyces avermitilis MA-4680] gi|29609197|dbj|BAC73248.1| putative type II restriction-modification system DNA cytosine-specific methylase [Streptomyces avermitilis MA-4680] Length = 515 Score = 62.5 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 DLFCG GG V+ F++ ++ ++QAN P+ DI++++ Sbjct: 53 DLFCGAGGSSTG---AAMVPGVQVAFAANHARDAIDSHQANHPDADHDLADISEVEPTRY 109 Query: 65 PDHDVLLAGFPCQPFSQA 82 P D+L A C S A Sbjct: 110 PRTDLLWASPACTAHSLA 127 >gi|28869583|ref|NP_792202.1| C-5 cytosine-specific DNA methylase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28852825|gb|AAO55897.1| C-5 cytosine-specific DNA methylase family protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 295 Score = 62.5 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI 59 M DLF G+GG + V+ +++ P +V + AN P+ + D+ + Sbjct: 1 MPTAIDLFAGLGGWSNGARRA----GVKVLWAANHWPVAVGWHSANHPDAIHVCQDLHQA 56 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 +P H ++LA CQ S+A Sbjct: 57 DWSKVPAHGIMLASPCCQGHSKA 79 >gi|312794286|ref|YP_004027209.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181426|gb|ADQ41596.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 419 Score = 62.5 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 38/130 (29%), Gaps = 55/130 (42%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-------------------YQA 45 DLF G GG+ + + E + Y +T Y+ Sbjct: 9 VDLFAGAGGLMEGFRRA----GINFIAHVEKDKYCCQTLQTRLIYHFLRENGEEDLYYKY 64 Query: 46 NFPNTL----------IFGDIAK------IKTQDIP----------------DHDVLLAG 73 + FG I+K I + +P + D+L+ G Sbjct: 65 LYGEITREEFVNLYPDEFGQISKTIINIEINDKTLPYIVDRINCLMREKGLKNIDLLIGG 124 Query: 74 FPCQPFSQAG 83 PCQ +S G Sbjct: 125 PPCQAYSLVG 134 >gi|269114810|ref|YP_003302573.1| Cytosine-specific DNA methyltransferase/Type II site-specific deoxyribonuclease [Mycoplasma hominis] gi|268322435|emb|CAX37170.1| Cytosine-specific DNA methyltransferase/Type II site-specific deoxyribonuclease [Mycoplasma hominis ATCC 23114] Length = 553 Score = 62.5 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +K +LF L E E N + T + N PN ++ DI K+ Sbjct: 1 MKSIELFA----GAGGLALGLEMAGFEHIGLVEFNKSAADTLKVNRPNWNVLCEDIEKVA 56 Query: 61 TQDIPD--------HDVLLAGFPCQPFSQAG 83 +D+ D+L G PCQ FS AG Sbjct: 57 ARDLKKEFNIEKGSLDLLSGGAPCQSFSYAG 87 >gi|187736717|ref|YP_001840974.1| hypothetical protein pEspB_p20 [Exiguobacterium arabatum] gi|183223750|emb|CAQ35235.1| m5C DNA methyltransferase M.Lsp1109I [Exiguobacterium arabatum] Length = 377 Score = 62.1 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 15/98 (15%) Query: 1 MLKITDLFCGIGGIRLDLEQTF-----NHRNVECF--FSSEINPYSVKTYQANF-----P 48 + K +LF G GG+ L + + +S++ + + KT++ N Sbjct: 2 IFKKGELFNGPGGLSLGAKNARVIHPETNEEYRIVHEWSNDYDEQACKTFRFNICDDIDD 61 Query: 49 NTLIFGDIAKIKTQD---IPDHDVLLAGFPCQPFSQAG 83 N++ G + ++ D + D D GFPC +SQ G Sbjct: 62 NSVHHGPVEQLPIGDKSVLGDIDCFAFGFPCNDYSQVG 99 >gi|89055380|ref|YP_510831.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1] gi|88864929|gb|ABD55806.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1] Length = 373 Score = 62.1 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 13/89 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 DLFCG GG+ LE +++ + +T++A P I G I ++ Sbjct: 3 YTAIDLFCGAGGLSAGLEMA----GFTVLAGNDLFDAAGRTFEATHPRAKFISGPIEELS 58 Query: 61 TQDIPDHD--------VLLAGFPCQPFSQ 81 + + + VL+ G PCQ +S Sbjct: 59 VERLMEVTGLRKGELSVLVGGPPCQAYSV 87 >gi|302900266|ref|XP_003048231.1| hypothetical protein NECHADRAFT_39810 [Nectria haematococca mpVI 77-13-4] gi|256729163|gb|EEU42518.1| hypothetical protein NECHADRAFT_39810 [Nectria haematococca mpVI 77-13-4] Length = 1354 Score = 62.1 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 18/95 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L+ DLFCG G LE +E ++++ N ++ TY AN + G I Sbjct: 823 LRGLDLFCGGGNFGRGLEDGG---GIEMRWANDFNEKAMHTYMANTAGPGAVSPFLGSID 879 Query: 58 KIK--------TQDIP---DHDVLLAGFPCQPFSQ 81 +++ ++P D D + G PC FS Sbjct: 880 ELQRLAIQGEFANNVPLVGDVDFISGGSPCPGFSL 914 >gi|126668652|ref|ZP_01739604.1| C-5 cytosine-specific DNA methylase [Marinobacter sp. ELB17] gi|126626911|gb|EAZ97556.1| C-5 cytosine-specific DNA methylase [Marinobacter sp. ELB17] Length = 347 Score = 62.1 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 11/86 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA-NFPNTLIFGDIAKIK 60 + DLFCG GG+ L + V ++ Y+ N+ + D+ ++ Sbjct: 4 ITAIDLFCGAGGLTHGLIKA----GVNVIAGVDVQKSCKYAYEKNNYGAEFVNMDVRELT 59 Query: 61 TQDI----PDHDV--LLAGFPCQPFS 80 ++ P V L PCQPFS Sbjct: 60 GMELNALYPKKSVRLLAGCAPCQPFS 85 >gi|119897062|ref|YP_932275.1| C-5 cytosine-specific DNA methylase [Azoarcus sp. BH72] gi|119669475|emb|CAL93388.1| probable C-5 cytosine-specific DNA methylase [Azoarcus sp. BH72] Length = 434 Score = 62.1 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 18/86 (20%) Query: 13 GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPN-TLIFGDIAKIKTQDIP 65 G+ L L++T E E T + N PN + GDI + + Sbjct: 2 GLDLGLDRTGR---YEIVACVEKEKVFCNTIRQNSAAGRINPNLKVFEGDINDLDPAQVL 58 Query: 66 D--------HDVLLAGFPCQPFSQAG 83 D D+L+ G PCQ FS AG Sbjct: 59 DSVNLKPGEVDLLVGGPPCQSFSTAG 84 >gi|233770212|gb|ACQ91179.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa] Length = 1557 Score = 62.1 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 35/110 (31%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L Q ++ E + + +Q N P + +F Sbjct: 1119 LDIFAGCGGLSEGLHQAGVSI---TKWAIEYEEPAGQAFQLNHPESKVFINNCNVILKAV 1175 Query: 54 ----GD----IAKIKTQDIPD---------------HDVLLAGFPCQPFS 80 GD I+ D+ D + G PCQ FS Sbjct: 1176 MDKCGDTDDCISTTDANDLASALDEKEKSDLPLPGQVDFINGGPPCQGFS 1225 >gi|233770210|gb|ACQ91178.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa] Length = 1565 Score = 62.1 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 35/110 (31%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L Q ++ E + + +Q N P + +F Sbjct: 1127 LDIFAGCGGLSEGLHQAGVSI---TKWAIEYEEPAGQAFQLNHPESKVFINNCNVILKAV 1183 Query: 54 ----GD----IAKIKTQDIPD---------------HDVLLAGFPCQPFS 80 GD I+ D+ D + G PCQ FS Sbjct: 1184 MDKCGDTDDCISTTDANDLASALDEKEKSDLPLPGQVDFINGGPPCQGFS 1233 >gi|227874220|ref|ZP_03992420.1| DNA (cytosine-5-)-methyltransferase [Oribacterium sinus F0268] gi|227839928|gb|EEJ50358.1| DNA (cytosine-5-)-methyltransferase [Oribacterium sinus F0268] Length = 336 Score = 62.1 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 13/92 (14%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 ML +LF L + E N + T N PN +I DIA I Sbjct: 1 MLTAIELFA----GAGGLALGLEKAGFQSLGLIEFNQDACNTLSKNRPNWRVICEDIANI 56 Query: 60 KTQDIPDH--------DVLLAGFPCQPFSQAG 83 D+ + D+L G PCQ FS AG Sbjct: 57 SKLDLEQYFSIKKGELDLLSGGAPCQAFSYAG 88 >gi|316977147|gb|EFV60295.1| putative type II DNA modification methyltransferase [Trichinella spiralis] Length = 298 Score = 62.1 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 12/84 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKT 61 +I +LF GIGG + + +I+ TY ANF + +I + Sbjct: 8 RILELFAGIGG---------SKVKYVPVGAYDIDETCNSTYVANFGGDIFRRRNICSLTW 58 Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83 ++ D + PCQPF +G Sbjct: 59 NELDQLQSDFWMLSPPCQPFMLSG 82 >gi|253997214|ref|YP_003049278.1| DNA-cytosine methyltransferase [Methylotenera mobilis JLW8] gi|253983893|gb|ACT48751.1| DNA-cytosine methyltransferase [Methylotenera mobilis JLW8] Length = 358 Score = 62.1 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 13/95 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF------FSSEINPYSVKTYQANFP----NTL 51 LKI +LFCG GGI E + ++ + + +VKTY N +T Sbjct: 4 LKIGELFCGPGGIAYGAELANLELIGQTATTLKHAWAVDYHQSTVKTYLKNIKGANEHTT 63 Query: 52 IFGDIAKIKTQD---IPDHDVLLAGFPCQPFSQAG 83 + D+ + + I + D GFPC FS+ G Sbjct: 64 LCSDVRDLNIPELSKISEIDGFAYGFPCNDFSRVG 98 >gi|313625252|gb|EFR95088.1| modification methylase Sau3AI [Listeria innocua FSL J1-023] Length = 227 Score = 62.1 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 14/95 (14%) Query: 2 LKITDLFCGIGGIRLDLE---QTFNHRNVECFFSSEIN--PYSVKTYQ---ANFPN-TLI 52 L I +F G+GG + L + +S++ + Y+ FP I Sbjct: 3 LNIFSMFDGVGGFIVGLNDANEAIEKEMFRTTYSNQFEPSKKAQDAYEVGVYRFPKMNHI 62 Query: 53 FGDIAKIKTQDIPD-HD----VLLAGFPCQPFSQA 82 DI + + HD +++ GFPCQ +S A Sbjct: 63 PDDIMTVSDNKFQEMHDAGVNMIVGGFPCQDYSVA 97 >gi|327438866|dbj|BAK15231.1| site-specific DNA methylase [Solibacillus silvestris StLB046] Length = 392 Score = 61.7 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 12/95 (12%) Query: 1 MLKITDLFCGIGGIRLDLEQT-------FNHRNVECFFSSEINPYSVKTYQANFPN---- 49 + K +LF G GG+ L + T +E +S++ + + +TY N Sbjct: 2 IFKKGELFNGPGGLSLAAKNTVVIHPETLEEFRIEHTWSNDFDQNACRTYALNICGDEND 61 Query: 50 -TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++I G + K++ +P+ GFPC +S G Sbjct: 62 PSVICGPVEKLQINQLPEIQCFAFGFPCNDYSLVG 96 >gi|317126940|ref|YP_004093222.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] gi|315471888|gb|ADU28491.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522] Length = 382 Score = 61.7 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 15/98 (15%) Query: 1 MLKITDLFCGIGGIRLDLEQTF-------NHRNVECFFSSEINPYSVKTYQANF-----P 48 + + +LF G GG+ L + ++ +S++ + + KTY N Sbjct: 2 IFRKGELFNGPGGLALGAKNAGFIHPETGEEWKIQHVWSNDYDSNACKTYGYNICGDEND 61 Query: 49 NTLIFGDIAKI---KTQDIPDHDVLLAGFPCQPFSQAG 83 ++ G + + I D D GFPC +SQ G Sbjct: 62 ESVHIGPVENLPIGNKDVIGDIDCFAFGFPCNDYSQVG 99 >gi|318057151|ref|ZP_07975874.1| DNA-cytosine methyltransferase [Streptomyces sp. SA3_actG] gi|318076183|ref|ZP_07983515.1| DNA-cytosine methyltransferase [Streptomyces sp. SA3_actF] Length = 386 Score = 61.7 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 5/80 (6%) Query: 6 DLFCGIGGIRLDLEQ----TFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 DLF G GG + E++P + TY ANFP+ + I Sbjct: 2 DLFAGAGGFSAGFHAYRPHGPASSPFRALAAVEMDPAAAATYAANFPSAKVSAIRIEGWD 61 Query: 61 TQDIPDHDVLLAGFPCQPFS 80 DV++ G PCQ FS Sbjct: 62 PTPYEGVDVIMGGPPCQGFS 81 >gi|290960099|ref|YP_003491281.1| hypothetical protein SCAB_57141 [Streptomyces scabiei 87.22] gi|260649625|emb|CBG72740.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 414 Score = 61.7 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 22/96 (22%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---FP-------NTLIFGD 55 ++ G GG + L + E + ++V+T +AN +P + L D Sbjct: 2 EICAGAGGQAVGLHNA----GFDHLALVEWDQHAVRTLRANVHDWPGWDKSRIDALEPMD 57 Query: 56 IAKIKTQDI--------PDHDVLLAGFPCQPFSQAG 83 + + + D D+L G PC PFS AG Sbjct: 58 VREFLGSKVHTSLDLEKGDLDLLAGGVPCPPFSLAG 93 >gi|161870058|ref|YP_001599227.1| modification methylase (cytosine-specific DNA methylase) [Neisseria meningitidis 053442] gi|161595611|gb|ABX73271.1| modification methylase (cytosine-specific DNA methylase) [Neisseria meningitidis 053442] Length = 340 Score = 61.7 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 13/88 (14%) Query: 2 LKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK 58 +KI DLFCG GG+ L + ++ +I+ Y+ N I D+ Sbjct: 1 MKIEAVDLFCGAGGLTAGLLRA----GIKVKAGYDIDAACAYAYEYNNKGAKFILQDVET 56 Query: 59 IKTQDIPDH---D---VLLAGFPCQPFS 80 + I H D +L PCQPFS Sbjct: 57 VTGDQIQAHYSKDAVRLLAGCAPCQPFS 84 >gi|322801270|gb|EFZ21957.1| hypothetical protein SINV_06528 [Solenopsis invicta] Length = 1113 Score = 61.7 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%) Query: 3 KITDLFCGIG-GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GD---IA 57 ++ LF G+ G L L++ VE +++SEI+ ++ A+F + + + GD I Sbjct: 791 RVLSLFDGLSTGF-LVLQKLG--LVVEVYYASEIDVNALTISSAHFGDRISYLGDVRGIT 847 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81 K K Q+I D+L+ G PC S Sbjct: 848 KEKIQEIAPIDLLIGGSPCNDLSL 871 >gi|116062016|dbj|BAF34636.1| DNA methyltransferase 1b [Brassica rapa] Length = 1519 Score = 61.7 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 36/110 (32%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------------ 52 D+F G GG+ LEQ ++ E + + ++ N P T + Sbjct: 1082 LDIFAGCGGLSQGLEQAGVSA---TKWAIEYEGPAGEAFRKNHPETTVIVDNCNVTLRAI 1138 Query: 53 ---FGD----IAKIKTQDIP---------------DHDVLLAGFPCQPFS 80 GD I+ + ++ D + G PCQ FS Sbjct: 1139 MEKCGDQDECISTTEANELAAKLDENQKRTLPLPGQVDFINGGPPCQGFS 1188 >gi|311899150|dbj|BAJ31558.1| putative modification methylase [Kitasatospora setae KM-6054] Length = 430 Score = 61.7 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 26/104 (25%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLIFG-- 54 L ++ G GG + L + EI+ ++VKT + N +G Sbjct: 8 LTSIEICAGAGGQAVGLHKA----GFSHLALVEIDQHAVKTLRKNVERPPRGGEDPWGWE 63 Query: 55 ---------DIAKIKTQD-IPDH-----DVLLAGFPCQPFSQAG 83 D+ + K + +PD +L G PC PFS AG Sbjct: 64 RDNCLILERDVKEFKPSEKLPDLKPGQLTLLAGGVPCPPFSIAG 107 >gi|328708218|ref|XP_003243626.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Acyrthosiphon pisum] Length = 1227 Score = 61.7 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L+ D+F G GG+ LE + + ++ E + + ++ N P +F Sbjct: 762 LRGLDIFAGCGGLSRGLEDSGLVISN---WAIECDDKAAGAFKLNNPEATVFVEDCNHLL 818 Query: 54 -----GDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 G+ + K Q+IP + D + G PCQ FS Sbjct: 819 KLAMAGEKSNSKNQNIPQKGEVDFICGGPPCQGFS 853 >gi|323178455|gb|EFZ64033.1| modification methylase NgoMIV [Escherichia coli 1180] Length = 377 Score = 61.7 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDI------- 56 ++ G GG L L EI+P + +T + N ++L + +I Sbjct: 7 VEICAGAGGQALGLHNA----GFTHRALVEIDPAACETLRLNNELHSLGWENIIEGCVKH 62 Query: 57 -AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 A+ + D D++ G PC PFS+AG Sbjct: 63 FAEHTAYNFSDIDLVAGGVPCPPFSKAG 90 >gi|260866454|ref|YP_003232856.1| putative DNA modification methylase [Escherichia coli O111:H- str. 11128] gi|257762810|dbj|BAI34305.1| predicted DNA modification methylase [Escherichia coli O111:H- str. 11128] Length = 356 Score = 61.7 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 13/88 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDI------- 56 ++ G GG L L EI+P + +T + N ++L + +I Sbjct: 7 VEICAGAGGQALGLHNA----GFTHRALVEIDPAACETLRLNNELHSLGWENIIEGCVKH 62 Query: 57 -AKIKTQDIPDHDVLLAGFPCQPFSQAG 83 A+ + D D++ G PC PFS+AG Sbjct: 63 FAEHTAYNFSDIDLVAGGVPCPPFSKAG 90 >gi|318042684|ref|ZP_07974640.1| DNA-cytosine methyltransferase [Synechococcus sp. CB0101] Length = 361 Score = 61.7 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 12/87 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + F G GG+ L LE+ + ++ + + SV T+ N D ++ + Sbjct: 4 LTCIESFSGPGGMSLGLERA----GFQLLYAFDNDAPSVVTHNLNLNGKCFQLDARQVDS 59 Query: 62 QDI--------PDHDVLLAGFPCQPFS 80 ++ D D+ G PCQ FS Sbjct: 60 VELLAQCGLSVGDLDLFSGGPPCQGFS 86 >gi|301348510|ref|ZP_07229251.1| DNA-cytosine methyltransferase [Acinetobacter baumannii AB056] Length = 62 Score = 61.3 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 +K+ D F G GG L Q ++ + + + +TYQANFP L + DI ++ Sbjct: 1 MKVIDFFSGCGGASEGLRQA----GLDITIGLDFDIKAAETYQANFPEALFYNVDIRELD 56 Query: 61 TQDI 64 +++ Sbjct: 57 EKEL 60 >gi|262118158|ref|YP_003275928.1| C-5 cytosine-specific DNA methylase [Gordonia bronchialis DSM 43247] gi|262088068|gb|ACY24035.1| C-5 cytosine-specific DNA methylase [Gordonia bronchialis DSM 43247] Length = 652 Score = 61.3 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 15/87 (17%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59 DLF G GG+ L +E+ ++ N Y V+ ++AN P+ + IA + Sbjct: 27 LDLFSGFGGLTLGIEKA----GFTTILAANHNQYKVEVHEANHPHVQHW--IADLINPEV 80 Query: 60 ----KTQDIPDHDVLLAGFPCQPFSQA 82 +D+P D+L+AG C SQA Sbjct: 81 PAYHSVRDLPAADLLVAGVTCTNHSQA 107 >gi|224011395|ref|XP_002295472.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|209583503|gb|ACI64189.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 738 Score = 61.3 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 23/92 (25%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF---------- 53 + DLF G GG+ + LE+ + + + P + T + NFPNTL++ Sbjct: 411 VLDLFAGGGGMSVGLERAGFNVKYKV----DNEPSACDTLEKNFPNTLVYRMSLRRFLEE 466 Query: 54 ---GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 G KI I VL CQ +S A Sbjct: 467 HKAGQ-TKIFPSTIVLLQVL-----CQGYSSA 492 >gi|260459541|ref|ZP_05807795.1| DNA methyltransferase [Mesorhizobium opportunistum WSM2075] gi|259034343|gb|EEW35600.1| DNA methyltransferase [Mesorhizobium opportunistum WSM2075] Length = 135 Score = 61.3 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 30/94 (31%), Gaps = 16/94 (17%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-----------N 49 ML + GI + F SEI + ++ Sbjct: 1 MLTYGSVCSGI----EAASVAWEPLGWRPKFFSEIEAFPSAVLAHHYGSNLPGEPLSKNG 56 Query: 50 TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +GD I P D+L+ G PCQ FS AG Sbjct: 57 VPNYGDFTSIPGDAGP-VDLLVGGTPCQSFSVAG 89 >gi|317483226|ref|ZP_07942221.1| C-5 cytosine-specific DNA methylase [Bifidobacterium sp. 12_1_47BFAA] gi|316915295|gb|EFV36722.1| C-5 cytosine-specific DNA methylase [Bifidobacterium sp. 12_1_47BFAA] Length = 349 Score = 61.3 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 10/86 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+ DLFCG GG+ L L+Q V + Y+ N + + ++ Sbjct: 1 MISAIDLFCGTGGLSLGLKQG----GVRVVAGIDNAASCAYPYEENIKAKFVRESVREVT 56 Query: 61 TQDIP------DHDVLLAGFPCQPFS 80 ++ +L PCQPFS Sbjct: 57 GDELKRLWGRSSVRLLAGCAPCQPFS 82 >gi|291303703|ref|YP_003514981.1| C-5 cytosine-specific DNA methylase [Stackebrandtia nassauensis DSM 44728] gi|290572923|gb|ADD45888.1| C-5 cytosine-specific DNA methylase [Stackebrandtia nassauensis DSM 44728] Length = 552 Score = 61.3 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 L I D FCG GG ++ VE ++ ++ ++ ANFP+ GDI K+ Sbjct: 3 LTIMDWFCGAGGSSQGIDAV---PGVEVTLAANHWQLALDSHAANFPHVDHKIGDIRKLP 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 QD P D A C+ FS A Sbjct: 60 VQDWPIADGFWASPECKKFSSA 81 >gi|183230936|ref|XP_655267.2| DNA (cytosine-5)-methyltransferase [Entamoeba histolytica HM-1:IMSS] gi|45505012|gb|AAS66974.1| 5-cytosine DNA methyltransferase [Entamoeba histolytica] gi|169802689|gb|EAL49892.2| DNA (cytosine-5)-methyltransferase, putative [Entamoeba histolytica HM-1:IMSS] Length = 322 Score = 61.3 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 3/79 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + + F GIGG+R E++ + N +IN + K Y NF + ++ I + Sbjct: 7 NVIEFFSGIGGLRSSYERSSININATFIPF-DINEIANKIYSKNFKEEVQVKNLDSISIK 65 Query: 63 DIP--DHDVLLAGFPCQPF 79 I + + PCQP+ Sbjct: 66 QIESLNCNTWFMSPPCQPY 84 >gi|320458138|dbj|BAJ68759.1| DNA methylase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 349 Score = 61.3 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 10/86 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+ DLFCG GG+ L L+Q V + Y+ N + + ++ Sbjct: 1 MISAIDLFCGTGGLSLGLKQG----GVRVVAGIDNAASCAYPYEENIKAKFVRKSVREVT 56 Query: 61 TQDIP------DHDVLLAGFPCQPFS 80 ++ +L PCQPFS Sbjct: 57 GDELKRLWGRSSVRLLAGCAPCQPFS 82 >gi|303285424|ref|XP_003062002.1| DNA methyltransferase [Micromonas pusilla CCMP1545] gi|226456413|gb|EEH53714.1| DNA methyltransferase [Micromonas pusilla CCMP1545] Length = 338 Score = 61.3 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 6/85 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIK 60 + + +CG+GG+ L + + + ++NP++ TY NF + I ++A Sbjct: 13 RALEFYCGVGGLHYALLRA--RPDATVAAAFDLNPHACDTYAFNFGDAARPIARNLASYP 70 Query: 61 TQDIPDH--DVLLAGFPCQPFSQAG 83 I H + L PCQPF++ G Sbjct: 71 AASIDAHAASLWLLSPPCQPFTRQG 95 >gi|226305778|ref|YP_002765738.1| hypothetical protein RER_22910 [Rhodococcus erythropolis PR4] gi|226184895|dbj|BAH32999.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length = 513 Score = 61.3 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPNTLI-FGDIAK 58 M+ +TDLFCG GG Q V ++ + +++T+ N P T D+++ Sbjct: 1 MITMTDLFCGAGGSSTGAVQV---PGVSVRMAANHWD-LAIETHNTNHPTTDHACADLSQ 56 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQA 82 + + P D+L A C SQA Sbjct: 57 VDPRLFPRTDLLWASPECTNHSQA 80 >gi|319776379|ref|YP_004138867.1| putative 5-methylcytosine methyltransferase [Haemophilus influenzae F3047] gi|329123543|ref|ZP_08252106.1| modification methylase HphIA [Haemophilus aegyptius ATCC 11116] gi|317450970|emb|CBY87199.1| Putative 5-methylcytosine methyltransferase [Haemophilus influenzae F3047] gi|327470359|gb|EGF15817.1| modification methylase HphIA [Haemophilus aegyptius ATCC 11116] Length = 79 Score = 61.3 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 12/73 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L DLF G GG+ L + S E+ P +TY+ NFP+ ++ D+ ++ Sbjct: 3 LTYLDLFSGAGGLSLGFDYA----GFRQLLSIELEPVYCETYRVNFPHHRVLQQDLTQLS 58 Query: 61 TQ-------DIPD 66 + DIP+ Sbjct: 59 NEQASLYHSDIPN 71 >gi|291539093|emb|CBL12204.1| Site-specific DNA methylase [Roseburia intestinalis XB6B4] Length = 212 Score = 61.3 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 23/88 (26%) Query: 2 LKITDLFCG---IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 +K+ +LF G IG + F R E FS E + F N ++ DI++ Sbjct: 1 MKVLELFAGTRSIG-------KAFEQRGHE-VFSVEWSKE--------FENIDLYEDISR 44 Query: 59 IKTQDI----PDHDVLLAGFPCQPFSQA 82 + +DI DV+ A C FS A Sbjct: 45 VTAEDILKLFGKPDVIWASPDCATFSIA 72 >gi|257387778|ref|YP_003177551.1| DNA methyltransferase [Halomicrobium mukohataei DSM 12286] gi|257170085|gb|ACV47844.1| DNA methyltransferase [Halomicrobium mukohataei DSM 12286] Length = 239 Score = 61.3 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 13/78 (16%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DL G+GG E N R + EI F I D+ ++ D+ Sbjct: 14 LDLCAGLGGFSSAFEDAENWR----VVTVEIEEE--------F-EPDICADVLNLRPADL 60 Query: 65 PDHDVLLAGFPCQPFSQA 82 P D++LA PC FS+A Sbjct: 61 PAADIVLASPPCTTFSKA 78 >gi|331703222|ref|YP_004399909.1| cytosine specific DNA methyltransferase Sau96I [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801777|emb|CBW53930.1| Cytosine specific DNA methyltransferase Sau96I [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 342 Score = 61.3 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 13/74 (17%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI--------PDHDV 69 EQ E + +V+T + N PN +IF D+ K+ +D+ + D+ Sbjct: 22 EQAGFEH----IGLVEFDKQAVETLKFNRPNWNIIFEDVQKVSQRDLKKEFNLKERELDL 77 Query: 70 LLAGFPCQPFSQAG 83 L G PCQ FS AG Sbjct: 78 LSGGAPCQSFSYAG 91 >gi|254413124|ref|ZP_05026896.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196180288|gb|EDX75280.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 416 Score = 61.3 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 29/106 (27%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA-----NFP------NTL 51 K+ F G G + L E + + + +EINP ++ Y+ N P + Sbjct: 6 KLFSFFAGTGFLDLGFEAS----GFDIVYVNEINPSYMEAYRYSRQVLNLPLPEYGYHYA 61 Query: 52 IFGDIAKIKTQD--------IPDH----DVL--LAGFPCQPFSQAG 83 G+I ++ + I D D++ + G PC FS G Sbjct: 62 DNGNIEQLTEGEKALRLWYLIQDARKSTDIVGFIGGPPCPDFSVGG 107 >gi|296425866|ref|XP_002842459.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638727|emb|CAZ86650.1| unnamed protein product [Tuber melanosporum] Length = 857 Score = 60.9 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 15/88 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 D FCG GG+ + +S + N +V TY+ NFP + Sbjct: 523 YTFGDAFCGGGGMSSGARAA----GFKNAWSFDSNSEAVSTYRRNFPQCTTYHS----TV 574 Query: 62 QDI-----PD--HDVLLAGFPCQPFSQA 82 D P+ DV+ PCQP S A Sbjct: 575 NDFLTLRHPELLVDVVHLSPPCQPHSPA 602 >gi|305662550|ref|YP_003858838.1| DNA-cytosine methyltransferase [Ignisphaera aggregans DSM 17230] gi|304377119|gb|ADM26958.1| DNA-cytosine methyltransferase [Ignisphaera aggregans DSM 17230] Length = 320 Score = 60.9 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 6/66 (9%) Query: 23 NHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI-----PDHDVLLAGFPC 76 + + + +P KTY++NFP T++ DI I DI +++ PC Sbjct: 23 KRGGFKILVAIDNDPACAKTYKSNFPEATVVVEDIRNINGNDIIHLAKQKPLIVIGSPPC 82 Query: 77 QPFSQA 82 +PF+ A Sbjct: 83 EPFTGA 88 >gi|326485515|gb|EGE09525.1| DNA methyltransferase Dim-2 [Trichophyton equinum CBS 127.97] Length = 1090 Score = 60.9 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 18/96 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 LK +LF G G LE+ +E ++ E + TY+AN P+ L G + Sbjct: 637 LKALNLFSGGGTFDRGLEEGGA---IESKWAVEWGLQQMLTYRANHPDAKGLKLFCGSVN 693 Query: 58 K-----IKTQD------IPDHDVLLAGFPCQPFSQA 82 I ++ I D + AG PCQ +S A Sbjct: 694 DYLFQAITGKENTYVARIGDVHFISAGSPCQGYSSA 729 >gi|326476794|gb|EGE00804.1| hypothetical protein TESG_08096 [Trichophyton tonsurans CBS 112818] Length = 986 Score = 60.9 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 18/96 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 LK +LF G G LE+ +E ++ E + TY+AN P+ L G + Sbjct: 533 LKALNLFSGGGTFDRGLEEGGA---IESKWAVEWGLQQMLTYRANHPDAKGLKLFCGSVN 589 Query: 58 K-----IKTQD------IPDHDVLLAGFPCQPFSQA 82 I ++ I D + AG PCQ +S A Sbjct: 590 DYLFQAITGKENTYVARIGDVHFISAGSPCQGYSSA 625 >gi|229847093|ref|ZP_04467198.1| modification methylase BepI-like protein [Haemophilus influenzae 7P49H1] gi|229809922|gb|EEP45643.1| modification methylase BepI-like protein [Haemophilus influenzae 7P49H1] Length = 395 Score = 60.9 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 14/71 (19%) Query: 27 VECFFSSEINPYSVK---TY----QANFPNTLIFGDIAKIKTQD------IP-DHDVLLA 72 E F+++I P + +Y +AN I + ++ P D D+L Sbjct: 40 FETIFANDIKPDAKAAWVSYFLDQKANANEIYHLESIVDLVKKERETHNIFPKDIDILTG 99 Query: 73 GFPCQPFSQAG 83 GFPCQ FS AG Sbjct: 100 GFPCQDFSVAG 110 >gi|53729085|ref|ZP_00134186.2| COG0270: Site-specific DNA methylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307257255|ref|ZP_07539025.1| Modification methylase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864105|gb|EFM96018.1| Modification methylase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 354 Score = 60.9 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 14/90 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 LK D FCG GG+ L++ + + +TY+ N + I ++ ++ Sbjct: 9 LKAVDFFCGGGGMSYGLQKA----GIRILAGIDYEINCKETYETNIKGASFIHANVFELT 64 Query: 61 TQ------DIPDHD---VLLAGFPCQPFSQ 81 + DI D +L+ PCQ +S Sbjct: 65 EKELEKTLDISRKDDNLILVGCSPCQYWSV 94 >gi|313884351|ref|ZP_07818113.1| putative modification methylase BanI [Eremococcus coleocola ACS-139-V-Col8] gi|312620429|gb|EFR31856.1| putative modification methylase BanI [Eremococcus coleocola ACS-139-V-Col8] Length = 335 Score = 60.9 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 32 SSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 E + + +T + N P+ +I DIA + DV+ G PCQ FS AG Sbjct: 29 FVEFDQRACETLRENRPDWNVIEDDIANVDFSQYKNKIDVVSGGAPCQAFSYAG 82 >gi|242316067|ref|ZP_04815083.1| modification methylase HgiDII [Burkholderia pseudomallei 1106b] gi|242139306|gb|EES25708.1| modification methylase HgiDII [Burkholderia pseudomallei 1106b] Length = 349 Score = 60.9 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG GG L F ++ +++P Y+AN + D++ + T+++ Sbjct: 12 VDLFCGAGG----LTHGFVLEDLPVVAGIDLDPACRYPYEANNRAKFVERDVSTVTTEEL 67 Query: 65 P------DHDVLLAGFPCQPFS 80 + +L PCQPFS Sbjct: 68 ETLFGDAELTILAGCAPCQPFS 89 >gi|126453573|ref|YP_001067912.1| modification methylase HgiDII [Burkholderia pseudomallei 1106a] gi|126227215|gb|ABN90755.1| modification methylase HgiDII [Burkholderia pseudomallei 1106a] Length = 344 Score = 60.9 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG GG L F ++ +++P Y+AN + D++ + T+++ Sbjct: 7 VDLFCGAGG----LTHGFVLEDLPVVAGIDLDPACRYPYEANNRAKFVERDVSTVTTEEL 62 Query: 65 P------DHDVLLAGFPCQPFS 80 + +L PCQPFS Sbjct: 63 ETLFGDAELTILAGCAPCQPFS 84 >gi|302656192|ref|XP_003019852.1| hypothetical protein TRV_06140 [Trichophyton verrucosum HKI 0517] gi|291183624|gb|EFE39228.1| hypothetical protein TRV_06140 [Trichophyton verrucosum HKI 0517] Length = 1085 Score = 60.9 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 18/96 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L +LF G G LE+ +E ++ E + + TY+AN P+ L G + Sbjct: 632 LNALNLFSGGGTFDRGLEEGGA---IESKWAVEWGLHQMLTYRANHPDGNGLKLFCGSVN 688 Query: 58 K-----IKTQD------IPDHDVLLAGFPCQPFSQA 82 I ++ I D + AG PCQ +S A Sbjct: 689 DYLFQAITGKENIYVARIGDAHFISAGSPCQGYSSA 724 >gi|326775654|ref|ZP_08234919.1| C-5 cytosine-specific DNA methylase [Streptomyces cf. griseus XylebKG-1] gi|326655987|gb|EGE40833.1| C-5 cytosine-specific DNA methylase [Streptomyces cf. griseus XylebKG-1] Length = 324 Score = 60.9 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 7/83 (8%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 L G+G + +E ++ E +P++ + P G I +I D+ Sbjct: 10 ISLCSGVGALDKAVENLTGAATA--VYA-EKDPWAAQVMAGLLPGVENLGSIDEINYADV 66 Query: 65 ----PDHDVLLAGFPCQPFSQAG 83 PD D L+AG+PCQ S G Sbjct: 67 AATYPDLDTLIAGWPCQGISNNG 89 >gi|126208670|ref|YP_001053895.1| modification methylase [Actinobacillus pleuropneumoniae L20] gi|126097462|gb|ABN74290.1| modification methylase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 364 Score = 60.9 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 14/90 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 LK D FCG GG+ L++ + + +TY+ N + I ++ ++ Sbjct: 19 LKAVDFFCGGGGMSYGLQKA----GIRILAGIDYEINCKETYETNIKGASFIHANVFELT 74 Query: 61 TQ------DIPDHD---VLLAGFPCQPFSQ 81 + DI D +L+ PCQ +S Sbjct: 75 EKELEKTLDISRKDDNLILVGCSPCQYWSV 104 >gi|261225387|ref|ZP_05939668.1| C-5 cytosine-specific DNA methylase [Escherichia coli O157:H7 str. FRIK2000] gi|261255360|ref|ZP_05947893.1| C-5 cytosine-specific DNA methylase [Escherichia coli O157:H7 str. FRIK966] gi|323182002|gb|EFZ67413.1| modification methylase XorII [Escherichia coli 1357] Length = 401 Score = 60.9 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 14/81 (17%) Query: 13 GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDI------- 64 G+ L LE+ E E + ++KT + N PN +F G I ++ Sbjct: 2 GLDLGLEEA----GFELVACVEQDKAALKTIKTNKPNLAVFEGSIVDCTGSELLALAGVN 57 Query: 65 --PDHDVLLAGFPCQPFSQAG 83 + D++ G PCQ FS G Sbjct: 58 DKEEIDLVAGGPPCQAFSVFG 78 >gi|327308782|ref|XP_003239082.1| hypothetical protein TERG_01066 [Trichophyton rubrum CBS 118892] gi|326459338|gb|EGD84791.1| hypothetical protein TERG_01066 [Trichophyton rubrum CBS 118892] Length = 1079 Score = 60.9 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 18/96 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 LK +LF G G LE+ VE ++ E + TY+AN P+ L G + Sbjct: 626 LKALNLFSGGGTFDRGLEEGGA---VESKWAVEWGVQQMLTYRANHPDGKGLKLFCGSVN 682 Query: 58 K-----------IKTQDIPDHDVLLAGFPCQPFSQA 82 I I D + AG PCQ +S A Sbjct: 683 DYLLQAITGKENIYVAKIGDAHFISAGSPCQGYSSA 718 >gi|299065518|emb|CBJ36687.1| Cytosine-specific methyltransferase [Ralstonia solanacearum CMR15] Length = 441 Score = 60.9 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 18/86 (20%) Query: 13 GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDIAKIKTQDI- 64 G+ L L+ T + C E P +T +AN + GDI+ + ++ Sbjct: 2 GLDLGLDGTGRFELLACV---EKVPSFCETIRANRGAGRLPAGLKVFEGDISDLDPAEVL 58 Query: 65 -------PDHDVLLAGFPCQPFSQAG 83 + DVL+ G PCQ FS AG Sbjct: 59 AACGLKPGELDVLVGGPPCQSFSTAG 84 >gi|254419546|ref|ZP_05033270.1| C-5 cytosine-specific DNA methylase superfamily [Brevundimonas sp. BAL3] gi|196185723|gb|EDX80699.1| C-5 cytosine-specific DNA methylase superfamily [Brevundimonas sp. BAL3] Length = 388 Score = 60.9 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%) Query: 24 HRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQDIPDH-DVLLAGFPCQPFSQ 81 V+ F+++++P + + AN P+ GD+ ++ D+P D+ A PCQ S Sbjct: 31 WAGVDTVFANDMDPAKGRAFVANHPDIRFHLGDVWSLRPADLPGAPDLAWASSPCQDVSL 90 Query: 82 AG 83 AG Sbjct: 91 AG 92 >gi|255553977|ref|XP_002518029.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis] gi|223543011|gb|EEF44547.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis] Length = 1542 Score = 60.9 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+Q ++ E + + ++ N P +L+F Sbjct: 1109 LDIFSGCGGLSEGLQQAGVSS---TKWAIEYEEPAGEAFKLNHPESLVFINNCNVILRAV 1165 Query: 54 ----GD----IAK---------IKTQDIPD------HDVLLAGFPCQPFS 80 GD I+ + + I D D + G PCQ FS Sbjct: 1166 MEKCGDTDDCISTSEAIELAASLDEKIINDLPLPGQVDFINGGPPCQGFS 1215 >gi|167759130|ref|ZP_02431257.1| hypothetical protein CLOSCI_01477 [Clostridium scindens ATCC 35704] gi|167663248|gb|EDS07378.1| hypothetical protein CLOSCI_01477 [Clostridium scindens ATCC 35704] Length = 324 Score = 60.9 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++I +LF GIG R L + + EIN +V++Y + F L + + Sbjct: 5 IQILELFGGIGSPRCALRNL--NIQTKAIDYVEINEKAVRSYNSMFREELEYKTQTVVGW 62 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 P D+L+ G PCQ S AG Sbjct: 63 NLKP--DILIHGSPCQDMSIAG 82 >gi|326559835|gb|EGE10235.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 7169] gi|326569677|gb|EGE19729.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC1] gi|326575962|gb|EGE25885.1| DNA-cytosine methyltransferase [Moraxella catarrhalis CO72] Length = 339 Score = 60.5 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 12/88 (13%) Query: 1 MLKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 M KI DLFCG+GG+ L + ++ +I+ Y+ N T + +A Sbjct: 1 MTKIEAVDLFCGVGGLTAGLIRA----GIKVKAGYDIDAACRYGYEYNNDATFVQKSVAD 56 Query: 59 IKTQDIPD--HD----VLLAGFPCQPFS 80 + +I D +L PCQPFS Sbjct: 57 VTADEIESWYSDGVVRLLAGCAPCQPFS 84 >gi|198420928|ref|XP_002123461.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha [Ciona intestinalis] Length = 662 Score = 60.5 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 8/85 (9%) Query: 2 LKITDLFCGIG-GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59 +++ LF GI G + L+Q V+ +F+SEI+ ++ + P + GD+ +I Sbjct: 375 IRVLSLFDGIATGF-VSLKQLG--IEVKVYFASEIDHEAICVSEIRHPRVVKHVGDVCEI 431 Query: 60 KTQ---DIPDHDVLLAGFPCQPFSQ 81 + D D+++ G PC S Sbjct: 432 TDKMLSDWGPFDLVIGGSPCNDLSI 456 >gi|256374317|ref|YP_003097977.1| DNA (cytosine-5-)-methyltransferase [Actinosynnema mirum DSM 43827] gi|255918620|gb|ACU34131.1| DNA (cytosine-5-)-methyltransferase [Actinosynnema mirum DSM 43827] Length = 404 Score = 60.5 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 21/98 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE--INPY--------SVKTYQANFPNTL 51 K+ DLF G GG+ L HR+ +++ I Y+ N Sbjct: 6 YKVVDLFSGAGGMSLGFR---THRDFTVVGAADAQIGKPSSPLGSLRCNNVYRDNIGIDP 62 Query: 52 IFGDIAKIKTQDIPDH--------DVLLAGFPCQPFSQ 81 + D+ +I + + DVL+A PC F++ Sbjct: 63 LQVDLGRIDPAVLREVWGLRRGELDVLVACPPCSGFTR 100 >gi|227431295|ref|ZP_03913348.1| DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352888|gb|EEJ43061.1| DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 353 Score = 60.5 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 16/93 (17%) Query: 1 MLKITDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIA 57 ++K LF GIG E +++ V+ ++E+ P TY+ +P T +F GDI Sbjct: 4 IMKAMSLFSSAGIG------ELNIHNKGVDIVAANELLPKRADTYRFFYPETKMFQGDIT 57 Query: 58 K--IKTQDIP-----DHDVLLAGFPCQPFSQAG 83 +KT+ I LLA PCQ S G Sbjct: 58 DENLKTEMIEFARQQKVRFLLATPPCQGLSSIG 90 >gi|282883032|ref|ZP_06291633.1| type II restriction-modification system methylation subunit [Peptoniphilus lacrimalis 315-B] gi|281297089|gb|EFA89584.1| type II restriction-modification system methylation subunit [Peptoniphilus lacrimalis 315-B] Length = 312 Score = 60.5 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 KI +LF GIG IR E EI+ VK+Y A + + K Sbjct: 5 KILELFGGIGAIRKAFINL--KIPYEVVDYVEIDKACVKSYNALYGENYKPKSVVGYKAP 62 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + D+++ G CQ FS+ G Sbjct: 63 N-EKIDLIMHGSSCQDFSRIG 82 >gi|323691274|ref|ZP_08105549.1| cytosine-specific methyltransferase [Clostridium symbiosum WAL-14673] gi|323504614|gb|EGB20401.1| cytosine-specific methyltransferase [Clostridium symbiosum WAL-14673] Length = 324 Score = 60.5 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++I +LF GIG R L + + EIN +V++Y + F L + + Sbjct: 5 IQILELFGGIGSPRCALRNL--NIPTKAIDYVEINEKAVRSYNSMFREELEYKTQTVVGW 62 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 P D+L+ G PCQ S AG Sbjct: 63 NLKP--DILIHGSPCQDMSIAG 82 >gi|237710586|ref|ZP_04541067.1| DNA-cytosine methyltransferase [Bacteroides sp. 9_1_42FAA] gi|229455308|gb|EEO61029.1| DNA-cytosine methyltransferase [Bacteroides sp. 9_1_42FAA] Length = 366 Score = 60.5 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 10/87 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-FPNTLIFGDIAKIK- 60 K+ F GG + + +EI+P +K Y+ N P DI + Sbjct: 34 KVFSCFA-CGG---GSTMGYKIAGYDVIGCNEIDPRMMKCYETNHHPQYSYLEDIRDLVR 89 Query: 61 ----TQDIPDHDVLLAGFPCQPFSQAG 83 +++ + D+L PC FS +G Sbjct: 90 RNNLPEELYNLDILDGSPPCSTFSMSG 116 >gi|318057150|ref|ZP_07975873.1| putative 5-methylcytosine methyltransferase [Streptomyces sp. SA3_actG] gi|318076182|ref|ZP_07983514.1| putative 5-methylcytosine methyltransferase [Streptomyces sp. SA3_actF] Length = 324 Score = 60.5 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 8/83 (9%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 DL G+GG L LEQ + +++ S T +AN P +I GD+ +I+ + Sbjct: 7 IDLCAGVGGQALGLEQA----GFRIAAAVDVDVDSCATLRANRPEWQVIRGDLKEIEPVE 62 Query: 64 ---IPDHDVLLAGFPCQPFSQAG 83 + D+L G P P++ G Sbjct: 63 YDCLDGADLLSCGLPRSPYTIGG 85 >gi|333024772|ref|ZP_08452836.1| putative 5-methylcytosine methyltransferase [Streptomyces sp. Tu6071] gi|332744624|gb|EGJ75065.1| putative 5-methylcytosine methyltransferase [Streptomyces sp. Tu6071] Length = 324 Score = 60.5 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 8/83 (9%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 DL G+GG L LEQ + +++ S T +AN P +I GD+ +I+ + Sbjct: 7 IDLCAGVGGQALGLEQA----GFRIAAAVDVDVDSCATLRANRPEWQVIRGDLKEIEPVE 62 Query: 64 ---IPDHDVLLAGFPCQPFSQAG 83 + D+L G P P++ G Sbjct: 63 YDCLDGADLLSCGLPRSPYTIGG 85 >gi|302876801|ref|YP_003845434.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|307687484|ref|ZP_07629930.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] gi|302579658|gb|ADL53670.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B] Length = 406 Score = 60.5 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 32/111 (28%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFP-----NTLI 52 KI DLF G GG+ Q+ E + E V T + + ++ Sbjct: 4 YKIIDLFAGCGGLEDGFLQSGQ---YEDVAAVEWLKPQVNTLVNRLKTKWGIVDADERVM 60 Query: 53 FGDIAK-------IKTQDI-------------PDHDVLLAGFPCQPFSQAG 83 DI + + ++ D+++ G PCQ +S AG Sbjct: 61 HFDIQREEELFGGWEDEEFGTNRGLDYFVNKANGIDIIIGGPPCQAYSVAG 111 >gi|254804563|ref|YP_003082784.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] gi|254668105|emb|CBA04653.1| putative type II DNA modification methylase [Neisseria meningitidis alpha14] Length = 450 Score = 60.5 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 8/85 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61 + + GI + + E + SEI + + +P+ GD+ I Sbjct: 6 TVGSVCSGI----EAASIAWQNLGFEFKWFSEILKFPSDILRNKYPHIDNLGDMNYIPEL 61 Query: 62 ---QDIPDHDVLLAGFPCQPFSQAG 83 I D++ G PCQ FS AG Sbjct: 62 LKHNSISSPDLICGGTPCQAFSLAG 86 >gi|302520934|ref|ZP_07273276.1| phage DNA methylase [Streptomyces sp. SPB78] gi|302429829|gb|EFL01645.1| phage DNA methylase [Streptomyces sp. SPB78] Length = 190 Score = 60.5 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 9/84 (10%) Query: 5 TDLFCGIGGIRLDLEQTFNH-RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62 L G L+Q H + +E +P + + A P+ GDI + Q Sbjct: 14 ISLCTG----SAALDQAVEHVTGLTTVAVAEKDPAASRLLAARVPHARNLGDITAVDWQH 69 Query: 63 ---DIPDHDVLLAGFPCQPFSQAG 83 ++P L AGFPCQ S AG Sbjct: 70 VAAELPRPAALTAGFPCQDISNAG 93 >gi|237720893|ref|ZP_04551374.1| DNA-cytosine methyltransferase [Bacteroides sp. 2_2_4] gi|229449728|gb|EEO55519.1| DNA-cytosine methyltransferase [Bacteroides sp. 2_2_4] Length = 370 Score = 60.5 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 10/87 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-FPNTLIFGDIAKIK- 60 K+ F GG + + +EI+P +K Y+ N P DI + Sbjct: 36 KVFSCFA-CGG---GSTMGYKIAGYDVIGCNEIDPRMMKCYETNHHPQYSYLEDIRDLVK 91 Query: 61 ----TQDIPDHDVLLAGFPCQPFSQAG 83 +++ + D+L PC FS +G Sbjct: 92 RNYLPEELYNLDILDGSPPCSTFSMSG 118 >gi|225465257|ref|XP_002268238.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1208 Score = 60.5 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+Q ++ E + + + N P+ L+F Sbjct: 776 LDVFAGCGGLSEGLQQAGVSL---TKWAIEYEEPAGEAFHLNHPDALMFINDCNVILRAI 832 Query: 54 ----GD-------------IAKIKTQDIPD------HDVLLAGFPCQPFS 80 GD K+ +DI + D + G PCQ FS Sbjct: 833 MSACGDADDCVSTSEATELAEKLDEKDIRNLPRPGQVDFINGGPPCQGFS 882 >gi|219871980|ref|YP_002476355.1| moodification methylase HgaIA [Haemophilus parasuis SH0165] gi|219692184|gb|ACL33407.1| moodification methylase HgaIA (M.HgaIA) (Cytosine-specific methyltransferase HgaIA) (M.HgaI-1) [Haemophilus parasuis SH0165] Length = 357 Score = 60.5 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 16/92 (17%) Query: 2 LKITDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAK 58 ++ LF GIG E + ++ ++E+ YQ +PN ++ GDI Sbjct: 5 IRGLSLFSSAGIG------EYFLSRVGIDIIVANELIKKRADLYQKIYPNHKMVIGDIRD 58 Query: 59 -------IKTQDIPDHDVLLAGFPCQPFSQAG 83 + D L+A PCQ S AG Sbjct: 59 QRIFNKVLNIALTNQVDFLIASPPCQGMSVAG 90 >gi|167539782|ref|XP_001741349.1| DNA (cytosine-5)-methyltransferase [Entamoeba dispar SAW760] gi|165894050|gb|EDR22134.1| DNA (cytosine-5)-methyltransferase, putative [Entamoeba dispar SAW760] Length = 322 Score = 60.5 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 3/79 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ + F GIGG+R E + + + +IN + K Y NF + ++ I + Sbjct: 7 RVIEFFSGIGGLRSSYEHSSINISATFIPF-DINEIANKIYSKNFKEEVQVKNLDSISIK 65 Query: 63 DIP--DHDVLLAGFPCQPF 79 I + + PCQP+ Sbjct: 66 QIESLNCNTWFMSPPCQPY 84 >gi|269797252|ref|YP_003311152.1| DNA-cytosine methyltransferase [Veillonella parvula DSM 2008] gi|269093881|gb|ACZ23872.1| DNA-cytosine methyltransferase [Veillonella parvula DSM 2008] Length = 423 Score = 60.2 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 48/128 (37%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT--------YQANFPN--- 49 ML I D+F G GG+ ++ + E++ + + Y N N Sbjct: 1 MLNIIDVFSGAGGLTEGFR---DNTKFKFICHIEMDKDACASLCLRNIYYYFKNINNLSP 57 Query: 50 --TLIFGDIA-------------------KIKTQDI-------------PDHDVLLAGFP 75 I G+I+ +I + I + D ++ G P Sbjct: 58 YFEYIQGNISREVLYSMVPSEVTKDVLSKEISEESILPIFEFIDKRLGTKELDGIIGGPP 117 Query: 76 CQPFSQAG 83 CQ +S G Sbjct: 118 CQAYSIIG 125 >gi|297619945|ref|YP_003708050.1| DNA-cytosine methyltransferase [Methanococcus voltae A3] gi|297378922|gb|ADI37077.1| DNA-cytosine methyltransferase [Methanococcus voltae A3] Length = 428 Score = 60.2 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 35/147 (23%), Gaps = 70/147 (47%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------- 50 DLFCG GG + EI V +Y NF Sbjct: 27 FTFVDLFCGCGGFSRGF----IDEGFNPLVAIEIEENPVSSYALNFNGKIYEKIYKNGQY 82 Query: 51 -----------------------------------LIFGDIAKIKTQDIPDH-------- 67 ++ DI +I + DI Sbjct: 83 NYILKENYFKLEDFMSKEEIDFFKKINNYDKLSPIILNEDIREIHSLDILKFIDDKNDNN 142 Query: 68 ------------DVLLAGFPCQPFSQA 82 D+L+ G PC+ ++ A Sbjct: 143 LGNIRSLSSNNIDLLIGGPPCEGYTGA 169 >gi|302760531|ref|XP_002963688.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii] gi|300168956|gb|EFJ35559.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii] Length = 1471 Score = 60.2 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 37/113 (32%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55 L + D+F G GG+ + Q+ ++ E + + + ++ N P +F D Sbjct: 1035 LSMLDIFAGCGGLSEGIHQSGIAS---TKWAIEYDHAAAEAFKMNHPTATVFFDNCNVVL 1091 Query: 56 --IAKI-----------------------KTQDIP---DHDVLLAGFPCQPFS 80 I +I + +P + D + G PCQ FS Sbjct: 1092 RSIMEIGGDLDDCCSTPEAAEMASKLSENQKSSLPRPGEVDFISGGPPCQGFS 1144 >gi|152973178|ref|YP_001338324.1| putative site-specific DNA methylas [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150958027|gb|ABR80057.1| putative site-specific DNA methylas [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 350 Score = 60.2 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 12/88 (13%) Query: 1 MLKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 M K+ DLFCG GG+ L V +I+P Y+ N I ++ Sbjct: 1 MKKVSCVDLFCGAGGLTHGL----VLEGVPVVAGIDIDPACKFPYETNNKAKFIEKSVSD 56 Query: 59 IKTQDIP----DHDV--LLAGFPCQPFS 80 + D+ D DV L PCQPFS Sbjct: 57 FTSSDLNELYADSDVRILAGCAPCQPFS 84 >gi|238892833|ref|YP_002917567.1| putative site-specific DNA methylase [Klebsiella pneumoniae NTUH-K2044] gi|238545149|dbj|BAH61500.1| putative site-specific DNA methylase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 350 Score = 60.2 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 12/88 (13%) Query: 1 MLKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 M K+ DLFCG GG+ L V +I+P Y+ N I ++ Sbjct: 1 MKKVSCVDLFCGAGGLTHGL----VLEGVPVVAGIDIDPACKFPYETNNKAKFIEKSVSD 56 Query: 59 IKTQDIP----DHDV--LLAGFPCQPFS 80 + D+ D DV L PCQPFS Sbjct: 57 FTSSDLNELYADSDVRILAGCAPCQPFS 84 >gi|156050777|ref|XP_001591350.1| hypothetical protein SS1G_07976 [Sclerotinia sclerotiorum 1980] gi|154692376|gb|EDN92114.1| hypothetical protein SS1G_07976 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1392 Score = 60.2 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 19/93 (20%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAKIK 60 DLFCG G LE+ N ++ ++ +V+TY N + + FG + + Sbjct: 656 LDLFCGGGNFGRGLEEGGAVHN---KWAVDLFSAAVQTYSTNLKDPEGTDMFFGSVNDLL 712 Query: 61 TQD---------IP---DHDVLLAGFPCQPFSQ 81 Q IP D DV+LAG PCQ FS+ Sbjct: 713 VQAFEGNPQKFRIPSPGDVDVILAGSPCQGFSR 745 >gi|302497567|ref|XP_003010784.1| hypothetical protein ARB_03486 [Arthroderma benhamiae CBS 112371] gi|291174327|gb|EFE30144.1| hypothetical protein ARB_03486 [Arthroderma benhamiae CBS 112371] Length = 1085 Score = 60.2 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 18/96 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L +LF G G LE+ +E ++ E + + TY+AN PN L G + Sbjct: 632 LNALNLFSGGGTFDRGLEEGGA---IESKWAVEWGLHQMLTYRANHPNGKGLKLFCGSVN 688 Query: 58 K-----IKTQD------IPDHDVLLAGFPCQPFSQA 82 I ++ I + + AG PCQ +S A Sbjct: 689 DYLFQAITGKENIYVARIGEAHFISAGSPCQGYSSA 724 >gi|167621147|ref|ZP_02389778.1| site-specific DNA-methyltransferase [Burkholderia thailandensis Bt4] Length = 355 Score = 60.2 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG+GG+ L + ++ +I+ ++AN + D+ K+K ++I Sbjct: 17 VDLFCGVGGLTHGLVRG----GIQVSAGIDIDTSCKFPFEANNSAVFLERDVGKLKAEEI 72 Query: 65 ------PDHDVLLAGFPCQPFS 80 D +L PCQPFS Sbjct: 73 APFYEGADITLLAGCAPCQPFS 94 >gi|167560986|ref|ZP_02353902.1| site-specific DNA-methyltransferase [Burkholderia oklahomensis EO147] Length = 355 Score = 60.2 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG+GG+ L + ++ +I+ ++AN + D+ K+K ++I Sbjct: 17 VDLFCGVGGLTHGLVRG----GIQVSAGIDIDTSCKFPFEANNSAVFLERDVGKLKAEEI 72 Query: 65 ------PDHDVLLAGFPCQPFS 80 D +L PCQPFS Sbjct: 73 APFYEGADITLLAGCAPCQPFS 94 >gi|170084905|ref|XP_001873676.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651228|gb|EDR15468.1| predicted protein [Laccaria bicolor S238N-H82] Length = 330 Score = 60.2 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 4/81 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--IK 60 + + +CGIGG+ L ++ + + + + + Y+AN N + DI+ Sbjct: 4 RALEFYCGIGGLHFALSRS--SLGGTVVRAFDWDQCACRVYKANHSNIVTNVDISTLVAA 61 Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81 D+ L CQP++ Sbjct: 62 DLAALKADLWLLSPACQPYTI 82 >gi|332016329|gb|EGI57242.1| DNA (cytosine-5)-methyltransferase 3B [Acromyrmex echinatior] Length = 778 Score = 60.2 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 8/84 (9%) Query: 3 KITDLFCGIG-GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GD---IA 57 ++ LF G+ G L L++ V+ +++SEI+ ++ A+F + + + GD I Sbjct: 485 RVLSLFDGLSTGF-LVLQKLG--LVVDVYYASEIDVNALTISSAHFGDRITYLGDVRSIT 541 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81 K K Q+I D+L+ G PC S Sbjct: 542 KEKIQEIAPIDLLIGGSPCNDLSL 565 >gi|302786012|ref|XP_002974777.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii] gi|300157672|gb|EFJ24297.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii] Length = 1335 Score = 60.2 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 37/113 (32%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55 L + D+F G GG+ + Q+ ++ E + + + ++ N P +F D Sbjct: 899 LSMLDIFAGCGGLSEGIHQSGIAS---TKWAIEYDHAAAEAFKMNHPTATVFFDNCNVVL 955 Query: 56 --IAKI-----------------------KTQDIP---DHDVLLAGFPCQPFS 80 I +I + +P + D + G PCQ FS Sbjct: 956 RSIMEIGGDLDDCCSTPEAAEMASKLSENQKSSLPRPGEVDFISGGPPCQGFS 1008 >gi|116514211|ref|YP_813117.1| site-specific DNA methylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093526|gb|ABJ58679.1| Site-specific DNA methylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 380 Score = 60.2 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 8/73 (10%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDIAKIKTQD---IPDHDVL 70 +Q +++E +P +V+TY+ N N T+ D+ D + + D L Sbjct: 26 DQNGEKWGFAHAWANEYDPDTVETYKLNILNDPDAKTVYCEDVRNFNLDDDEKLGNIDAL 85 Query: 71 LAGFPCQPFSQAG 83 + GFPC +S G Sbjct: 86 IFGFPCNDYSVVG 98 >gi|328774327|gb|EGF84364.1| hypothetical protein BATDEDRAFT_29368 [Batrachochytrium dendrobatidis JAM81] Length = 349 Score = 60.2 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 +K+ + + GIGG L +T H + + ++N + YQ P + +I + Sbjct: 8 IKVLEFYSGIGGFHAALSKT--HIAFQVLQAFDMNINANLVYQTTHPTVPVSVRNIGFLS 65 Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83 D+ D+ L PCQP+S+ G Sbjct: 66 PIDLDAFQADMFLLSPPCQPYSRKG 90 >gi|146301288|ref|YP_001195879.1| hypothetical protein Fjoh_3546 [Flavobacterium johnsoniae UW101] gi|146155706|gb|ABQ06560.1| hypothetical protein Fjoh_3546 [Flavobacterium johnsoniae UW101] Length = 216 Score = 60.2 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 8/80 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 +K+ +L+ GIGG R + + E++P Y +FP +T++ GD + Sbjct: 1 MKVLNLYAGIGGNR-------KNWTDVTVTAVELDPQLAAVYAEHFPQDTVVVGDAHQYL 53 Query: 61 TQDIPDHDVLLAGFPCQPFS 80 + D + + PCQ S Sbjct: 54 IDHHNEFDFIWSSPPCQSHS 73 >gi|297563163|ref|YP_003682137.1| DNA-cytosine methyltransferase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847611|gb|ADH69631.1| DNA-cytosine methyltransferase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 387 Score = 60.2 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 9/82 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAKI 59 + + F GIG R+ LE + +S++ Y+ +F +T + DI K+ Sbjct: 14 VLEFFAGIGLARIGLEAA----GLRVSWSNDYETSKKNMYEGHFGTSSDHTYVLRDIRKV 69 Query: 60 KTQDIP-DHDVLLAGFPCQPFS 80 +P V A PC S Sbjct: 70 YADQLPAGASVAWASSPCTDLS 91 >gi|189199258|ref|XP_001935966.1| C-5 cytosine methyltransferase DmtA [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983065|gb|EDU48553.1| C-5 cytosine methyltransferase DmtA [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 744 Score = 59.8 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 17/88 (19%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 D+FCG GG Q + + + +++TY+ N P F ++ D Sbjct: 315 FGDVFCGAGGASQGALQA----GYSICWGLDFDHTALETYRLNHPTAHTF----ELDAHD 366 Query: 64 IP---------DHDVLLAGFPCQPFSQA 82 P DVL PC +S A Sbjct: 367 FPPKNVCPKCWKVDVLHLSPPCCYWSPA 394 >gi|325126553|gb|ADY85883.1| DNA-cytosine methyltransferase family protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 380 Score = 59.8 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 8/73 (10%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDIAKIKTQD---IPDHDVL 70 ++ +++E +P +V+TY+ N N T+ D+ K D + + D L Sbjct: 26 DKNGVEWGFTHAWANEYDPDTVETYKLNILNDPDAKTVYCEDVRKFNLDDDEKLGNIDAL 85 Query: 71 LAGFPCQPFSQAG 83 + GFPC +S G Sbjct: 86 IFGFPCNDYSVVG 98 >gi|167763801|ref|ZP_02435928.1| hypothetical protein BACSTE_02181 [Bacteroides stercoris ATCC 43183] gi|167697917|gb|EDS14496.1| hypothetical protein BACSTE_02181 [Bacteroides stercoris ATCC 43183] Length = 357 Score = 59.8 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 10/87 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK- 60 K+ F GG + + +EI+P +K Y N P DI + Sbjct: 23 KVFSCFA-CGG---GSTMGYKLAGFDVIGCNEIDPKMMKCYIENHNPQYTFLEDIRDLVR 78 Query: 61 ----TQDIPDHDVLLAGFPCQPFSQAG 83 +++ + D+L PC FS +G Sbjct: 79 RNNLPEELYNLDILDGSPPCSTFSMSG 105 >gi|2654108|gb|AAC49931.1| cytosine-5 DNA methyltransferase [Pisum sativum] Length = 1554 Score = 59.8 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G G + L ++ ++ E + ++AN P L+F Sbjct: 1120 LDIFAGCGALSEGLHKSGASS---TKWAIEYEEPAGNAFKANHPEALVFINNCNVILRAI 1176 Query: 54 ----GDI-------------AKIKTQDIPD------HDVLLAGFPCQPFS 80 GDI +K+ +D+ D + G PCQ FS Sbjct: 1177 MEKCGDIDECISTAEAAELASKLDDKDLNSLPLPGQVDFINGGPPCQGFS 1226 >gi|462652|sp|P25282|MTG1_HAEGA RecName: Full=Modification methylase HgaIA; Short=M.HgaIA; AltName: Full=Cytosine-specific methyltransferase HgaIA; AltName: Full=M.HgaI-1 Length = 357 Score = 59.8 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 16/89 (17%) Query: 5 TDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAK--- 58 LF GIG E + ++ ++E+ YQ +PN ++ GDI Sbjct: 8 LSLFSSAGIG------EYFLSRVGIDIIVANELIKKRADLYQKIYPNHKMVIGDIRDQRI 61 Query: 59 ----IKTQDIPDHDVLLAGFPCQPFSQAG 83 + D L+A PCQ S AG Sbjct: 62 FNKVLNIALTNQVDFLIASPPCQGMSVAG 90 >gi|2895089|gb|AAC39356.1| Met2-type cytosine DNA-methyltransferase [Daucus carota] Length = 1761 Score = 59.8 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+Q+ ++ E + ++ N P+T +F Sbjct: 1326 LDIFAGCGGLSEGLQQSGV---CRTKWAIEYEEPAGDAFKLNHPDTTMFINNCNVILKAI 1382 Query: 54 ----GD----IA---------KIKTQDIPD------HDVLLAGFPCQPFS 80 GD I+ K+ +++ + D + G PCQ FS Sbjct: 1383 MDKSGDADDCISTPEAADLAAKLSEEELKNLPLPGQVDFINGGPPCQGFS 1432 >gi|329767774|ref|ZP_08259290.1| hypothetical protein HMPREF0428_00987 [Gemella haemolysans M341] gi|328838875|gb|EGF88469.1| hypothetical protein HMPREF0428_00987 [Gemella haemolysans M341] Length = 336 Score = 59.8 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 29/79 (36%), Gaps = 9/79 (11%) Query: 11 IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK-----TQDI 64 GG F E EI+P + YQ N P L DI +++ Sbjct: 23 CGG---GSTMGFKLAGFEHLGGVEIDPKVAEVYQLNHNPKYLYNEDIRAFLARDEYPEEL 79 Query: 65 PDHDVLLAGFPCQPFSQAG 83 + DVL PC FS AG Sbjct: 80 YNLDVLEGSPPCSSFSLAG 98 >gi|320588321|gb|EFX00790.1| DNA methyltransferase dim-2 [Grosmannia clavigera kw1407] Length = 1168 Score = 59.8 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 18/95 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L+ DLFCG G + LE VE ++++I ++ T AN G Sbjct: 653 LRALDLFCGCGSLGRGLEDAGV---VETRWANDIWDRAIHTLMANRATADAVEPFLGSAD 709 Query: 58 KIKTQDI-----------PDHDVLLAGFPCQPFSQ 81 ++ + + + D++ G PCQ FS Sbjct: 710 ELLARALQGRYSRAVPAPGEVDLISGGSPCQGFSV 744 >gi|42560766|ref|NP_975217.1| cytosine-specific DNA-methyltransferase Sau96I [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492262|emb|CAE76859.1| Cytosine-specific DNA-methyltransferase Sau96I [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320716|gb|ADK69359.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 341 Score = 59.8 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 13/74 (17%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI--------PDHDV 69 EQ E + +V+T + N PN ++F D+ K+ +D+ + D+ Sbjct: 22 EQAGFEH----VGLVEFDKQAVETLKFNSPNWNIVFEDVQKVSQRDLKKEFNLKERELDL 77 Query: 70 LLAGFPCQPFSQAG 83 L G PCQ FS AG Sbjct: 78 LSGGAPCQSFSYAG 91 >gi|85710855|ref|ZP_01041916.1| DNA modification methylase M.NGOI [Idiomarina baltica OS145] gi|85695259|gb|EAQ33196.1| DNA modification methylase M.NGOI [Idiomarina baltica OS145] Length = 345 Score = 59.8 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 14/89 (15%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGDIAK 58 ++ G GG L L EI + KT + N +I GD+ + Sbjct: 14 LEMCAGAGGQALGLHMA----GFRHSALIEIESAACKTLRLNNQEHNLGWQEIIEGDLIE 69 Query: 59 I---KTQDIPD-HDVLLAGFPCQPFSQAG 83 + D D++ G PC PFS+AG Sbjct: 70 FSQSNAKSYKDQIDLVAGGVPCPPFSKAG 98 >gi|262200381|ref|YP_003271589.1| C-5 cytosine-specific DNA methylase [Gordonia bronchialis DSM 43247] gi|262083728|gb|ACY19696.1| C-5 cytosine-specific DNA methylase [Gordonia bronchialis DSM 43247] Length = 372 Score = 59.8 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 7/81 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + DLF G GG+ + + + E++ ++ T + + + Sbjct: 19 TVIDLFAGPGGLDV----AAHWLGLPVVG-VELDADAIAT-RHAAGLKSHHRSVQRCTPA 72 Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 D +L AG PCQ F+ AG Sbjct: 73 DF-RATILTAGPPCQTFTVAG 92 >gi|20531191|gb|AAM27409.1|AF500228_1 RIP defective [Neurospora intermedia] Length = 839 Score = 59.8 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI---AK 58 D F G GG + H C + ++V + ANF +T I DI Sbjct: 288 YTAGDTFAGAGGASRGITDAGVHLEF-CV---DNWEHAVASLNANFQDTTIH-DIDMHEF 342 Query: 59 IKTQDIPD-HDVLLAGFPCQPFSQA 82 I ++I D+L PCQ +S A Sbjct: 343 IVDKEIRHRVDILHLSPPCQVWSPA 367 >gi|216711|dbj|BAA14377.1| HgaI methylase [Avibacterium paragallinarum] gi|435623|dbj|BAA04206.1| HgaI methylase 1 [Avibacterium paragallinarum] gi|1090538|prf||2019268A HgaI restriction methylase:ISOTYPE=1 Length = 365 Score = 59.8 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 16/89 (17%) Query: 5 TDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAK--- 58 LF GIG E + ++ ++E+ YQ +PN ++ GDI Sbjct: 16 LSLFSSAGIG------EYFLSRVGIDIIVANELIKKRADLYQKIYPNHKMVIGDIRDQRI 69 Query: 59 ----IKTQDIPDHDVLLAGFPCQPFSQAG 83 + D L+A PCQ S AG Sbjct: 70 FNKVLNIALTNQVDFLIASPPCQGMSVAG 98 >gi|46138503|ref|XP_390942.1| hypothetical protein FG10766.1 [Gibberella zeae PH-1] Length = 1343 Score = 59.8 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 18/95 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L+ DLFCG G LE +E ++++ + ++ TY AN G I Sbjct: 809 LRGLDLFCGGGNFGRGLEDGG---GIEMRWANDYDGKALHTYMANTSGPDAVHPFLGSID 865 Query: 58 KIK--------TQDIP---DHDVLLAGFPCQPFSQ 81 ++ +++P D D + G PC FS Sbjct: 866 DMQRFAIQGKFAENVPPVGDVDFISGGSPCPGFSL 900 >gi|225691144|gb|ACO06245.1| methylcytosine methyltransferase M.BbrII [Bifidobacterium breve UCC2003] Length = 349 Score = 59.8 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 12/83 (14%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIKTQD 63 DLFCG GG+ L L+Q + + N + Y N I + + +D Sbjct: 10 IDLFCGTGGLSLGLKQG----GIRVVAGID-NASACSYPYSHNIKAKFIERSVCDVTGED 64 Query: 64 IP----DHDV--LLAGFPCQPFS 80 + DV L PCQPFS Sbjct: 65 LKRLWGQADVRLLAGCAPCQPFS 87 >gi|171185166|ref|YP_001794085.1| DNA-cytosine methyltransferase [Thermoproteus neutrophilus V24Sta] gi|170934378|gb|ACB39639.1| DNA-cytosine methyltransferase [Thermoproteus neutrophilus V24Sta] Length = 320 Score = 59.8 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Query: 25 RNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDIPDHD----VLLAGFPCQPF 79 + EI+ + +TY AN +T++ DI I D+ V++ PC+PF Sbjct: 25 AGFRIKVAIEIDRDAARTYSANHRSTIVLEEDIRNIGYTDVTKFVKNPRVVIGSPPCEPF 84 Query: 80 SQA 82 + A Sbjct: 85 TAA 87 >gi|71064975|ref|YP_263702.1| C-5 cytosine-specific DNA methylase [Psychrobacter arcticus 273-4] gi|71037960|gb|AAZ18268.1| probable C-5 cytosine-specific DNA methylase [Psychrobacter arcticus 273-4] Length = 520 Score = 59.4 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 +K +LF G GG+ L L+ E +E++P + +TY NF N Sbjct: 1 MKYIELFAGCGGLSLGLQA----VGFENIMVNELSPMAGETYAYNFYNE 45 >gi|121608158|ref|YP_995965.1| DNA-cytosine methyltransferase [Verminephrobacter eiseniae EF01-2] gi|121552798|gb|ABM56947.1| DNA-cytosine methyltransferase [Verminephrobacter eiseniae EF01-2] Length = 349 Score = 59.4 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 11/83 (13%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63 DLFCG GG L F + +++P Y+ N + DI K+ T + Sbjct: 8 VDLFCGAGG----LTHGFILEGLPVVAGIDLDPACRFPYEKNNAQAKFVERDIGKVTTTE 63 Query: 64 IP------DHDVLLAGFPCQPFS 80 + D +L PCQPFS Sbjct: 64 LKALFGAADVTILAGCAPCQPFS 86 >gi|308803765|ref|XP_003079195.1| possible site-specific DNA-methyltransferase (ISS) [Ostreococcus tauri] gi|116057650|emb|CAL53853.1| possible site-specific DNA-methyltransferase (ISS) [Ostreococcus tauri] Length = 840 Score = 59.4 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 4/79 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ LF L+ +E +P+ + A FP + D+A++ Sbjct: 15 LRVASLFS----GIGGLDLGLLQAGHRISLMAEKDPHCKQVLAARFPGVALLNDVAEVLP 70 Query: 62 QDIPDHDVLLAGFPCQPFS 80 + D D +LAGFPC S Sbjct: 71 SMLTDIDCILAGFPCNDCS 89 >gi|315054007|ref|XP_003176378.1| hypothetical protein MGYG_00467 [Arthroderma gypseum CBS 118893] gi|311338224|gb|EFQ97426.1| hypothetical protein MGYG_00467 [Arthroderma gypseum CBS 118893] Length = 1091 Score = 59.4 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 18/96 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 LK +LF G G LE+ +E ++ E + TY+AN P+ L G + Sbjct: 633 LKALNLFSGGGTFDRGLEEG---TAIESKWAVEWGLQQMLTYRANHPDGKGLNLFCGSVN 689 Query: 58 KIKTQD-----------IPDHDVLLAGFPCQPFSQA 82 +Q I D + AG PCQ +S A Sbjct: 690 DYLSQAFRGEEHEYIAGIGDVHFISAGSPCQGYSTA 725 >gi|156060059|ref|XP_001595952.1| hypothetical protein SS1G_02167 [Sclerotinia sclerotiorum 1980] gi|154699576|gb|EDN99314.1| hypothetical protein SS1G_02167 [Sclerotinia sclerotiorum 1980 UF-70] Length = 405 Score = 59.4 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 29/105 (27%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI- 59 L D+F G GG+ ++ V + E++ + KT + NFP+ +++ D K Sbjct: 265 LTTLDIFSGAGGLSQGFHESGV---VGTKYVIELDTAAAKTLKRNFPDAIVYNHDANKFL 321 Query: 60 -----KTQDIP-------------------DHDVLLAGFPCQPFS 80 D+ D ++++ G PCQ +S Sbjct: 322 EWVVNDEADLNAGIVYDMENNALLKMPSRGDIEMIIVGPPCQGWS 366 >gi|2895087|gb|AAC39355.1| Met1-type cytosine DNA-methyltransferase [Daucus carota] Length = 1545 Score = 59.4 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+++ ++ E + ++ N P +L+F Sbjct: 1111 LDIFAGCGGLSEGLQKSGV---CTTKWAIEYEEAAGDAFKLNHPESLMFINNCNVILKAI 1167 Query: 54 ----GD----IA---------KIKTQDIPD------HDVLLAGFPCQPFS 80 GD I+ K+ ++I + D + G PCQ FS Sbjct: 1168 MDKTGDADDCISTPEAAELAAKLSEEEIKNLPLPGQVDFINGGPPCQGFS 1217 >gi|168056113|ref|XP_001780066.1| predicted protein [Physcomitrella patens subsp. patens] gi|162668469|gb|EDQ55075.1| predicted protein [Physcomitrella patens subsp. patens] Length = 346 Score = 59.4 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 18/96 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFG 54 +K+ LF GIGG + L + N S EI + Q + T + + Sbjct: 218 IKVLSLFSGIGGAEVALHKIGIKLN--VVVSVEIELEPRRCLQTWWSVTNQTGHLDVEYH 275 Query: 55 DIAKIK-------TQDIPDHDVLLAGFPCQPFSQAG 83 D+ + D+++ G PC F AG Sbjct: 276 DVRHLTKSVLTRLVNKYQGFDLIVGGSPCNNF--AG 309 >gi|15236676|ref|NP_192638.1| DNA (cytosine-5-)-methyltransferase, putative [Arabidopsis thaliana] gi|7267541|emb|CAB78023.1| Met2-type cytosine DNA-methyltransferase-like protein [Arabidopsis thaliana] gi|332657308|gb|AEE82708.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana] Length = 1512 Score = 59.4 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 36/110 (32%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ LE+ ++ E + ++ N P +F Sbjct: 1074 LDIFAGCGGLSHGLEKAGVSN---TKWAIEYEEPAGHAFKQNHPEATVFVDNCNVILRAI 1130 Query: 54 ----GD-------------IAKIKTQ---DIP---DHDVLLAGFPCQPFS 80 GD +AK+ +P D + G PCQ FS Sbjct: 1131 MEKCGDVDDCVSTVEAAELVAKLDENQKSTLPLPGQADFISGGPPCQGFS 1180 >gi|156548658|ref|XP_001602026.1| PREDICTED: similar to CG10692-PC [Nasonia vitripennis] Length = 325 Score = 59.4 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 27 VECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIPD--HDVLLAGFPCQPFSQ 81 + S +IN + K Y+ NFP T I +I + ++I D +L PCQPF++ Sbjct: 14 GKIITSIDINTTANKVYRHNFPETANISRNIESVTVEEIAKLHIDCILMSPPCQPFTR 71 >gi|281212492|gb|EFA86652.1| DNA cytosine-5--methyltransferase [Polysphondylium pallidum PN500] Length = 420 Score = 59.4 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 12/92 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPN----TLIF 53 L+I + F GIGG+ + E S +IN + Y N +PN + Sbjct: 37 LRILEFFSGIGGMYY--STLISGIPFEVLQSFDINTNANDVYNYNISSKYPNPKKHKVNS 94 Query: 54 GDIAKIKTQDIPDH--DVLLAGFPCQPFSQAG 83 I + T+++ + L PCQPF++ G Sbjct: 95 KSIDALTTKELESFRANTWLMSPPCQPFTRVG 126 >gi|209546991|ref|YP_002278909.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538235|gb|ACI58169.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 355 Score = 59.4 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 4/59 (6%) Query: 26 NVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDI-PDHD--VLLAGFPCQPFS 80 V+ + E +P + TY AN P + G DIAK+ T D+ P H VL G PCQ FS Sbjct: 21 GVDVRAAVENHPSACLTYSANHPGATLLGTDIAKVATIDVGPRHQPLVLFGGPPCQGFS 79 >gi|255071197|ref|XP_002507680.1| predicted protein [Micromonas sp. RCC299] gi|226522955|gb|ACO68938.1| predicted protein [Micromonas sp. RCC299] Length = 1263 Score = 59.4 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 6/64 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +KI LF GIGG+ L Q + + E + + +FP + DI+ + Sbjct: 1 MKIVTLFTGIGGLDLGFSQAGH----DVIMQVESDERCASVLKTHFPGARLHRDISSL-- 54 Query: 62 QDIP 65 +++P Sbjct: 55 EELP 58 >gi|270292955|ref|ZP_06199166.1| conserved hypothetical protein [Streptococcus sp. M143] gi|270278934|gb|EFA24780.1| conserved hypothetical protein [Streptococcus sp. M143] Length = 95 Score = 59.4 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 12/77 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 I DLF G GG+ E + + +++T+Q N N ++ GDI I Sbjct: 4 YNIVDLFSGAGGLSYGFEMAR----FNVLLGIDNDEKALETFQKNHQNSEILCGDITNIS 59 Query: 61 -TQDIP------DHDVL 70 +DI D++ Sbjct: 60 YEKDIKPIIGEQKVDII 76 >gi|163751396|ref|ZP_02158621.1| probable C-5 cytosine-specific DNA methylase [Shewanella benthica KT99] gi|161328699|gb|EDP99847.1| probable C-5 cytosine-specific DNA methylase [Shewanella benthica KT99] Length = 532 Score = 59.4 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 17/78 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + +LF G GG+ L L++ + ++E++P + +T+ NF N Sbjct: 1 MNHIELFAGCGGLSLGLDKA----GFKLIMANELSPMAAETFAYNFLNE---------NL 47 Query: 62 QDIPDHDVLLAGFPCQPF 79 ++I +D G P Q + Sbjct: 48 EEIAKND----GKPKQSY 61 >gi|116193601|ref|XP_001222613.1| hypothetical protein CHGG_06518 [Chaetomium globosum CBS 148.51] gi|88182431|gb|EAQ89899.1| hypothetical protein CHGG_06518 [Chaetomium globosum CBS 148.51] Length = 748 Score = 59.0 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAK-I 59 D+F G GG +E+ V+ F+ + +V++ ++NF + I+ D+A I Sbjct: 337 YTAGDVFSGAGGASRGIERA----GVQLLFAVDHWAPAVESLKSNFRESRIYDMDVASFI 392 Query: 60 KTQDI-PDHDVLLAGFPCQPFSQA 82 + D D+L PCQ +S A Sbjct: 393 TSSDTHWRVDILHLSPPCQFWSPA 416 >gi|301321505|gb|ADK68895.1| Site-specific DNA methylase [Gordonia sp. KTR9] Length = 331 Score = 59.0 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L +TD+F G GG + Q ++ P +V T+Q N P+T I +++++ Sbjct: 18 LTMTDIFSGAGGSSEGMTQAGVSVQ---VAANHW-PVAVATHQVNHPDTEHILANLSEVD 73 Query: 61 TQDIPDHDVLLAGFPC 76 + P D+L A C Sbjct: 74 WRSFPSTDILWASPSC 89 >gi|115638547|ref|XP_787412.2| PREDICTED: similar to DNA methyltransferase 3A [Strongylocentrotus purpuratus] gi|115931470|ref|XP_001187128.1| PREDICTED: similar to DNA methyltransferase 3A [Strongylocentrotus purpuratus] Length = 1447 Score = 59.0 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 16/89 (17%) Query: 2 LKITDLFCGIG-GI----RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGD 55 +++ LF G+G G+ L + VEC+++SE++ ++ + GD Sbjct: 1163 IRVLSLFDGLGTGMLVLRELGFD-------VECYYASEVSEEAITVAAVRLKGQIQQIGD 1215 Query: 56 IAKIKTQDIPD---HDVLLAGFPCQPFSQ 81 + KI +++ D+L+ G PC S Sbjct: 1216 VQKITPKELKSWGPFDILIGGSPCNDLSI 1244 >gi|227486883|ref|ZP_03917199.1| DNA restriction-modification system, DNA methylase [Corynebacterium glucuronolyticum ATCC 51867] gi|227541955|ref|ZP_03972004.1| DNA restriction-modification system DNA methylase [Corynebacterium glucuronolyticum ATCC 51866] gi|227092957|gb|EEI28269.1| DNA restriction-modification system, DNA methylase [Corynebacterium glucuronolyticum ATCC 51867] gi|227182398|gb|EEI63370.1| DNA restriction-modification system DNA methylase [Corynebacterium glucuronolyticum ATCC 51866] Length = 332 Score = 59.0 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 2/63 (3%) Query: 23 NHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80 E EI+ + +T + N ++ D+ D+ G PC PFS Sbjct: 25 ERAGFEHLAVVEIDSNACETLRLNRGEEWNIVEQDVHTFDGAPYKGVDLFAGGVPCPPFS 84 Query: 81 QAG 83 AG Sbjct: 85 IAG 87 >gi|297739461|emb|CBI29643.3| unnamed protein product [Vitis vinifera] Length = 460 Score = 59.0 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+Q ++ E + + + N P+ L+F Sbjct: 28 LDVFAGCGGLSEGLQQAGVSL---TKWAIEYEEPAGEAFHLNHPDALMFINDCNVILRAI 84 Query: 54 ----GD-------------IAKIKTQDIPD------HDVLLAGFPCQPFS 80 GD K+ +DI + D + G PCQ FS Sbjct: 85 MSACGDADDCVSTSEATELAEKLDEKDIRNLPRPGQVDFINGGPPCQGFS 134 >gi|328956110|ref|YP_004373443.1| DNA-cytosine methyltransferase [Coriobacterium glomerans PW2] gi|328456434|gb|AEB07628.1| DNA-cytosine methyltransferase [Coriobacterium glomerans PW2] Length = 513 Score = 59.0 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 39/136 (28%), Gaps = 56/136 (41%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKT------------------ 42 I DLF G GG+ N + S E +P + +T Sbjct: 7 IIDLFAGAGGLGEGFSSACNESGSPAFKIIMSVEKDPLAHRTLRMRAFFRAAYRACGAMP 66 Query: 43 -----YQAN------------FP------------NTLIFGDIAKIKTQDIP------DH 67 Y N FP TL GD A ++ D Sbjct: 67 ASYINYLQNPSAENLEALRNEFPEQWQQANREALCETLKEGDDALVEEAKRRLDAYGSDS 126 Query: 68 DVLLAGFPCQPFSQAG 83 +L+ G PCQ +S G Sbjct: 127 FILIGGPPCQAYSLVG 142 >gi|322499679|emb|CBZ34753.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 840 Score = 59.0 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/33 (51%), Positives = 22/33 (66%) Query: 51 LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + GDI +I + P HDVL GFPCQ F++AG Sbjct: 428 FLVGDITEIPSAFFPTHDVLTGGFPCQSFAKAG 460 Score = 46.3 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 4/46 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF 47 ++LF GIG R LE+ F+ E P + Y N Sbjct: 317 FTFSELFGGIGMFRSGLERVGGRA----AFAVEFAPPAQIVYALNH 358 >gi|146088814|ref|XP_001466154.1| modification methylase-like protein [Leishmania infantum JPCM5] gi|134070256|emb|CAM68593.1| modification methylase-like protein [Leishmania infantum JPCM5] Length = 840 Score = 59.0 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/33 (51%), Positives = 22/33 (66%) Query: 51 LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + GDI +I + P HDVL GFPCQ F++AG Sbjct: 428 FLVGDITEIPSAFFPTHDVLTGGFPCQSFAKAG 460 Score = 46.3 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 4/46 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF 47 ++LF GIG R LE+ F+ E P + Y N Sbjct: 317 FTFSELFGGIGMFRSGLERVGGRA----AFAVEFAPPAQIVYALNH 358 >gi|157870650|ref|XP_001683875.1| modification methylase-like protein [Leishmania major] gi|68126942|emb|CAJ05189.1| modification methylase-like protein [Leishmania major strain Friedlin] Length = 840 Score = 59.0 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/33 (51%), Positives = 22/33 (66%) Query: 51 LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + GDI +I + P HDVL GFPCQ F++AG Sbjct: 428 FLVGDITEIPSAFFPTHDVLTGGFPCQSFAKAG 460 Score = 46.3 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 4/46 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF 47 ++LF GIG R LE+ F+ E P + Y N Sbjct: 317 FTFSELFGGIGMFRSGLERVGGRA----AFAVEFAPPAQIVYALNH 358 >gi|116203489|ref|XP_001227555.1| hypothetical protein CHGG_09628 [Chaetomium globosum CBS 148.51] gi|88175756|gb|EAQ83224.1| hypothetical protein CHGG_09628 [Chaetomium globosum CBS 148.51] Length = 2354 Score = 59.0 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 17/94 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL------IFGD 55 L+ DLFCG G LE+ VE ++++I ++ TY AN P++ GD Sbjct: 1662 LRGMDLFCGSGNFGRGLEEGGA---VEVKWANDIWDRAIHTYMANSPDSTAKPFLGSVGD 1718 Query: 56 IAKIK-----TQDIP---DHDVLLAGFPCQPFSQ 81 + ++ ++P D D + AG PC FS Sbjct: 1719 LLQLALEGKYADNVPRPGDVDFISAGSPCPGFSL 1752 >gi|322492416|emb|CBZ27690.1| modification methylase-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 847 Score = 59.0 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/33 (51%), Positives = 22/33 (66%) Query: 51 LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + GDI +I + P HDVL GFPCQ F++AG Sbjct: 435 FLVGDITEIPSAFFPMHDVLTGGFPCQSFAKAG 467 Score = 42.4 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 4/46 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF 47 ++LF GIG R LE+ + F+ E + Y N Sbjct: 325 FTFSELFGGIGMFRSGLERVGGRAS----FAVEFALPAQVVYALNH 366 >gi|300728105|ref|ZP_07061477.1| modification methylase HgaIA [Prevotella bryantii B14] gi|299774619|gb|EFI71239.1| modification methylase HgaIA [Prevotella bryantii B14] Length = 382 Score = 59.0 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 13/91 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-VECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 ++I LF IG E F + V ++E K YQ+ +P T+I GDI Sbjct: 4 MRIVSLFANIG----VAEACFQELDDVNVVVANEWLTKRAKLYQSIYPESTMICGDITDE 59 Query: 60 KT-QDI------PDHDVLLAGFPCQPFSQAG 83 Q I D ++A PCQ S AG Sbjct: 60 NIYQQILQACRRERVDTIMATPPCQGMSTAG 90 >gi|145631945|ref|ZP_01787699.1| putative 5-methylcytosine methyltransferase [Haemophilus influenzae R3021] gi|145639068|ref|ZP_01794676.1| ABC transporter ATPase component [Haemophilus influenzae PittII] gi|144982396|gb|EDJ89970.1| putative 5-methylcytosine methyltransferase [Haemophilus influenzae R3021] gi|145272040|gb|EDK11949.1| ABC transporter ATPase component [Haemophilus influenzae PittII] Length = 79 Score = 59.0 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 12/73 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L DLF G GG+ L + S E+ P +TY+ NFP+ ++ D+ ++ Sbjct: 3 LTYLDLFSGAGGLSLGFDYA----EFRQLLSIELEPVYCETYRVNFPHHRVLQQDLTQLS 58 Query: 61 TQ-------DIPD 66 + DIP+ Sbjct: 59 NEQASLYRSDIPN 71 >gi|313665138|ref|YP_004047009.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma leachii PG50] gi|312949950|gb|ADR24546.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma leachii PG50] Length = 342 Score = 59.0 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 13/74 (17%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI--------PDHDV 69 EQ E + +V+T + N PN +IF D+ K +D+ + D+ Sbjct: 22 EQAGFEH----IGLVEFDKQAVETLKFNRPNWNIIFEDVQKASQRDLKKEFNLKERELDL 77 Query: 70 LLAGFPCQPFSQAG 83 L G PCQ FS AG Sbjct: 78 LSGGAPCQSFSYAG 91 >gi|145348185|ref|XP_001418536.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578765|gb|ABO96829.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 371 Score = 59.0 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 3/84 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ +++CG+G + L + E + ++NP + Y N+ + + Sbjct: 29 LRVLEMYCGVGVMHAALRRARGDE-AEVCGAYDVNPNACDAYAMNYGTRPSQKSLVSVAM 87 Query: 62 QDI--PDHDVLLAGFPCQPFSQAG 83 + + + PCQPF++AG Sbjct: 88 ETLVKTKAEAWAMSPPCQPFTRAG 111 >gi|326779115|ref|ZP_08238380.1| DNA-cytosine methyltransferase [Streptomyces cf. griseus XylebKG-1] gi|326659448|gb|EGE44294.1| DNA-cytosine methyltransferase [Streptomyces cf. griseus XylebKG-1] Length = 433 Score = 58.6 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 39/114 (34%), Gaps = 36/114 (31%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIFGD 55 L ++ G GG + L Q + EI+ ++ +T + N + + D Sbjct: 8 LTSIEICAGAGGQAIGLHQA----GFKHLALVEIDKHAAETLEWNIKRRESWSWEREYCD 63 Query: 56 I--------AKIKTQDI------------------PDHDVLLAGFPCQPFSQAG 83 + I + DI D D+L G PC PFS AG Sbjct: 64 VISDDVNNFRPIPSDDIQDSGLDKPVKFLGRQLRRGDLDLLAGGVPCPPFSHAG 117 >gi|190404528|ref|YP_001965292.1| C-5 cytosine-specific DNA methylase [Amycolatopsis mediterranei] gi|161087214|gb|ABX56703.1| C-5 cytosine-specific DNA methylase [Amycolatopsis mediterranei] Length = 541 Score = 58.6 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 4/76 (5%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDIPD 66 F G GG R + ++ NP ++ T+ NFP + GDIAK P Sbjct: 9 FAGFGGERTGVLAVPGTHG--VLGAN-HNPDAIATHALNFPGMDHYEGDIAKADIGTFPR 65 Query: 67 HDVLLAGFPCQPFSQA 82 D A C P++ A Sbjct: 66 VDFFWASPSCPPWTDA 81 >gi|254244955|ref|ZP_04938277.1| hypothetical protein PA2G_05834 [Pseudomonas aeruginosa 2192] gi|126198333|gb|EAZ62396.1| hypothetical protein PA2G_05834 [Pseudomonas aeruginosa 2192] Length = 475 Score = 58.6 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 8/86 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + GI ++ + +EI P+ +P GD+ K+ Sbjct: 5 ITYGSVCSGI----EAASVAWHMLGFRASWFAEIEPFPSAVLAQRWPAVPNLGDMTKLAR 60 Query: 62 QDIPDHD----VLLAGFPCQPFSQAG 83 + + +L+ G PCQ FS AG Sbjct: 61 EVLLGIIAAPLILVGGTPCQDFSVAG 86 >gi|291562973|emb|CBL41789.1| DNA-methyltransferase (dcm) [butyrate-producing bacterium SS3/4] Length = 367 Score = 58.6 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 35/103 (33%), Gaps = 25/103 (24%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------F 53 LKI F G G + L E+ E F +E +P +K Y+ + I Sbjct: 6 LKIFSFFSGSGFLDLGFEK----NGFEIVFVNEFHPAFMKAYKYSRKKMKIKEPEYGYFN 61 Query: 54 GDIAKI-------------KTQDIPDHDVLLAGFPCQPFSQAG 83 GDI + + + G PC FS AG Sbjct: 62 GDINEFLLNRKNELYQWMQDARKDGSLVGFIGGPPCPDFSIAG 104 >gi|256379578|ref|YP_003103238.1| C-5 cytosine-specific DNA methylase [Actinosynnema mirum DSM 43827] gi|255923881|gb|ACU39392.1| C-5 cytosine-specific DNA methylase [Actinosynnema mirum DSM 43827] Length = 496 Score = 58.6 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 4/83 (4%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59 ML TDLFCG GG L ++ ++ +P +++T+ NFP+ DI+++ Sbjct: 1 MLTATDLFCGAGGSGLG---ATAVPGIQLVMAANHSPRAIETHATNFPHCQHDCADISQV 57 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 + ++L A C + A Sbjct: 58 VPRRYRRTNILWASPECTNHTTA 80 >gi|3132825|gb|AAC16389.1| putative cytosine-5 DNA methyltransferase [Zea mays] Length = 1525 Score = 58.2 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+Q ++ E + + + N P ++F Sbjct: 1084 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFNKNHPEAVVFVDNCNVILKAI 1140 Query: 54 ----GD----------------IAKIKTQDIP---DHDVLLAGFPCQPFS 80 GD + ++ ++P + + + G PCQ FS Sbjct: 1141 MDKCGDTDDCVSTSEAAEQAAKLPEVNINNLPVPGEVEFINGGPPCQGFS 1190 >gi|291320302|ref|YP_003515564.1| cytosine specific methyltransferase [Mycoplasma agalactiae] gi|290752635|emb|CBH40608.1| Cytosine specific methyltransferase [Mycoplasma agalactiae] Length = 339 Score = 58.2 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 13/74 (17%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIP--------DHDV 69 E+ + E + + +T + N + + DI KI +D+ + D+ Sbjct: 20 EKAGFNH----IGLVEFDKDACQTLRNNRSSWNVYEEDIRKIALRDLEKEFKIKKYELDL 75 Query: 70 LLAGFPCQPFSQAG 83 L G PCQ FS AG Sbjct: 76 LSGGAPCQSFSYAG 89 >gi|302381289|ref|YP_003817112.1| DNA-cytosine methyltransferase [Brevundimonas subvibrioides ATCC 15264] gi|302191917|gb|ADK99488.1| DNA-cytosine methyltransferase [Brevundimonas subvibrioides ATCC 15264] Length = 384 Score = 58.2 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 F+++++ +++AN + GD+ + D+P D+ A PCQ S AG Sbjct: 29 RTLFANDMDRAKAASWRANHAGDIHVGDVWTLDAGDLPGRADLAWASSPCQDVSLAG 85 >gi|15236413|ref|NP_193150.1| DMT2 (DNA METHYLTRANSFERASE 2); DNA (cytosine-5-)-methyltransferase/ DNA binding / protein binding [Arabidopsis thaliana] gi|2244770|emb|CAB10193.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana] gi|7268119|emb|CAB78456.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana] gi|332657979|gb|AEE83379.1| DNA methyltransferase 2 [Arabidopsis thaliana] Length = 1519 Score = 58.2 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 35/110 (31%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ LE ++ E + ++ N P +F Sbjct: 1081 LDIFAGCGGLSHGLENAGVST---TKWAIEYEEPAGHAFKQNHPEATVFVDNCNVILRAI 1137 Query: 54 ----GDI-------------AKIKTQ---DIP---DHDVLLAGFPCQPFS 80 GD+ AK+ +P D + G PCQ FS Sbjct: 1138 MEKCGDVDDCVSTVEAAELAAKLDENQKSTLPLPGQVDFINGGPPCQGFS 1187 >gi|6523846|gb|AAF14882.1|AF138283_1 cytosine-5 methyltransferase [Arabidopsis thaliana] Length = 1517 Score = 58.2 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 35/110 (31%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ LE ++ E + ++ N P +F Sbjct: 1079 LDIFAGCGGLSHGLENAGVST---TKWAIEYEEPAGHAFKQNHPEATVFVDNCNVILRAI 1135 Query: 54 ----GDI-------------AKIKTQ---DIP---DHDVLLAGFPCQPFS 80 GD+ AK+ +P D + G PCQ FS Sbjct: 1136 MEKCGDVDDCVSTVEAAELAAKLDENQKSTLPLPGQVDFINGGPPCQGFS 1185 >gi|162463699|ref|NP_001105186.1| DNA methyl transferase1 [Zea mays] gi|20977598|gb|AAM28226.1| DNA methyltransferase 101 [Zea mays] Length = 1457 Score = 58.2 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+Q ++ E + + + N P ++F Sbjct: 1016 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFNKNHPEAVVFVDNCNVILKAI 1072 Query: 54 ----GD----------------IAKIKTQDIP---DHDVLLAGFPCQPFS 80 GD + ++ ++P + + + G PCQ FS Sbjct: 1073 MDKCGDTDDCVSTSEAAEQAAKLPEVNINNLPVPGEVEFINGGPPCQGFS 1122 >gi|322700739|gb|EFY92492.1| putative DNA cytosine methyltransferase [Metarhizium acridum CQMa 102] Length = 950 Score = 58.2 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 18/95 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--FPN--TLIFGDIA 57 L+ DLFCG G LE+ V ++++ N ++ TY AN PN + G I Sbjct: 477 LRGLDLFCGGGNFGRGLEEGGA---VRMSWANDCNARAIHTYMANCSHPNLLSPYLGSID 533 Query: 58 KIKTQ-----------DIPDHDVLLAGFPCQPFSQ 81 + + I D + G PC FS Sbjct: 534 DFQKEAFSGNFSKSVPTIGSVDFISGGSPCPGFSL 568 >gi|255573870|ref|XP_002527854.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis] gi|223532778|gb|EEF34557.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis] Length = 1584 Score = 58.2 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------------ 52 D+F G GG+ LE+ ++ E + + ++ N P L+ Sbjct: 1127 LDIFAGCGGLSEGLERAGISV---TKWAIEYEEPAGEAFKQNHPEALMLINNCNVILRAI 1183 Query: 53 ---FGD----IA---------KIKTQDIPDH------DVLLAGFPCQPFS 80 GD I K+ ++I + + + G PCQ FS Sbjct: 1184 MSACGDADDCICTSEASELAEKLDEKEISNFPRPGEVEFINGGPPCQGFS 1233 >gi|159461702|gb|ABW96890.1| DRM-type DNA-methyltransferase [Elaeis guineensis] Length = 591 Score = 57.8 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 15/92 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55 + + LF GIGG + L + H ++ S EI+ + ++ + T G D Sbjct: 466 ITVLSLFSGIGGAEVALHRLGIH--LKTVVSVEISDVNRNILKSWWEQTNQTGELIDLFD 523 Query: 56 IAKIKTQDIPD-------HDVLLAGFPCQPFS 80 + ++ + D+++ G PC S Sbjct: 524 VQELNGDKLEQMINTFGGFDLVIGGSPCNNLS 555 >gi|48374276|gb|AAT41966.1| putative DNA methyl transferase [Fremyella diplosiphon Fd33] Length = 104 Score = 57.8 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 4/44 (9%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP 48 DLF G GG+ L EQ + S EI+P ++ NFP Sbjct: 46 VDLFAGAGGMTLGFEQA----GFDVLASVEIDPIHCAIHEFNFP 85 >gi|187939824|gb|ACD38964.1| DNA-cytosine methyltransferase [Pseudomonas aeruginosa] Length = 572 Score = 57.8 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 4/67 (5%) Query: 21 TFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----IAKIKTQDIPDHDVLLAGFPC 76 + +EI P+ ++P+ GD I +I T I + +AG PC Sbjct: 22 ALEPIGFRARWFAEIEPFPSAVLAHHYPSVPNHGDMTKLIRRILTGAIEAPPLAIAGTPC 81 Query: 77 QPFSQAG 83 Q FS AG Sbjct: 82 QAFSVAG 88 >gi|297792161|ref|XP_002863965.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp. lyrata] gi|297309800|gb|EFH40224.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp. lyrata] Length = 1532 Score = 57.8 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L++ + ++ E + + ++ N P + +F Sbjct: 1094 LDIFAGCGGLSQGLKKAGVS---DTKWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAI 1150 Query: 54 ----GD----IAKIKTQDIP---------------DHDVLLAGFPCQPFS 80 GD ++ + ++ D + G PCQ FS Sbjct: 1151 MEKGGDQDDCVSTTEANELAAKLAEDQKSTLPLPGQVDFINGGPPCQGFS 1200 >gi|242043138|ref|XP_002459440.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor] gi|241922817|gb|EER95961.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor] Length = 1397 Score = 57.8 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+Q ++ E + + + N P ++F Sbjct: 955 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFSKNHPEAVVFVDNCNVILKAI 1011 Query: 54 ----GD----IA------------KIKTQDIP---DHDVLLAGFPCQPFS 80 GD I+ ++ ++P + + + G PCQ FS Sbjct: 1012 MDKCGDTDDCISTSEAAEQAAKLPELNINNLPVPGEVEFINGGPPCQGFS 1061 >gi|242023477|ref|XP_002432160.1| DNA methyltransferase, putative [Pediculus humanus corporis] gi|212517542|gb|EEB19422.1| DNA methyltransferase, putative [Pediculus humanus corporis] Length = 1161 Score = 57.8 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 19/95 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 LK + F G GG+ L Q+ + ++ +I+ + + ++ NF N ++F Sbjct: 698 LKTLNAFSGCGGLAEGLRQSGIA---DIAWAIDIDKPTSEAFKLNFSNIVMFESDCNFFL 754 Query: 60 -----------KTQDIPD---HDVLLAGFPCQPFS 80 P+ + L G PCQ FS Sbjct: 755 KEVLSGKTFDKDGNRYPEKGEVEFLCGGPPCQGFS 789 >gi|28198487|ref|NP_778801.1| site-specific DNA-methyltransferase [Xylella fastidiosa Temecula1] gi|182681164|ref|YP_001829324.1| DNA-cytosine methyltransferase [Xylella fastidiosa M23] gi|28056571|gb|AAO28450.1| site-specific DNA-methyltransferase [Xylella fastidiosa Temecula1] gi|182631274|gb|ACB92050.1| DNA-cytosine methyltransferase [Xylella fastidiosa M23] gi|307579611|gb|ADN63580.1| DNA-cytosine methyltransferase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 355 Score = 57.8 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG+GG+ L + + +I+P ++AN + D+A++K + Sbjct: 17 VDLFCGVGGLTHGLARG----GISVAAGIDIDPNCQFPFEANNAALFLECDVARLKAAAV 72 Query: 65 P------DHDVLLAGFPCQPFS 80 D +L PCQPFS Sbjct: 73 RGFYQAADITLLAGCAPCQPFS 94 >gi|159490457|ref|XP_001703193.1| DNA methyltransferase [Chlamydomonas reinhardtii] gi|158270733|gb|EDO96569.1| DNA methyltransferase [Chlamydomonas reinhardtii] Length = 539 Score = 57.8 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 6/84 (7%) Query: 3 KITDLFCGIGGIRLDLEQTF----NHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 +I DL+ G+G + L + V+ + +IN + Y D+ + Sbjct: 31 RILDLYSGVGCLHAALGRPGVLPPGCTQVQVAAAVDINTAANAVYAVEHGTEPRALDLTR 90 Query: 59 IKTQDIPD--HDVLLAGFPCQPFS 80 + + DV L PCQP++ Sbjct: 91 VTAAQLDALCADVWLLTPPCQPYT 114 >gi|168010951|ref|XP_001758167.1| predicted protein [Physcomitrella patens subsp. patens] gi|162690623|gb|EDQ76989.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1579 Score = 57.8 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L Q ++ E + + + N P T +F Sbjct: 1131 LDIFAGCGGLSEGLRQAGVAT---TKWAIEYEHPASEAFNLNHPETNVFCENCNVILRCI 1187 Query: 54 ----GD----------------IAKIKTQDIP---DHDVLLAGFPCQPFS 80 GD ++ K + +P + D + G PCQ FS Sbjct: 1188 MERGGDSDECLSTPDAQEMASALSDEKKKLLPAQGEVDFINGGPPCQGFS 1237 >gi|260221504|emb|CBA30135.1| hypothetical protein Csp_C22030 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 151 Score = 57.5 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 9/86 (10%) Query: 2 LK-ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DI 56 +K DLF G G L + + + ++ + TY+ANFP+ + DI Sbjct: 1 MKHFVDLFSGGG---LGA-RGAVMAGLTPILAVDMWDMACDTYRANFPSAIALNQRVDDI 56 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82 ++ D+LLA C S A Sbjct: 57 NPLEHIKREAVDLLLASPECTNHSVA 82 >gi|253995855|ref|YP_003047919.1| DNA-cytosine methyltransferase [Methylotenera mobilis JLW8] gi|253982534|gb|ACT47392.1| DNA-cytosine methyltransferase [Methylotenera mobilis JLW8] Length = 387 Score = 57.5 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 22/99 (22%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA-----NFP---NTLIFG 54 K+ F G G + L E++ + F +E + + Y+ N P + G Sbjct: 8 KVFSFFSGSGFLDLGFEKS----GFDVVFVNEHHKPFLDAYKHSRKKMNLPAPKHGYFEG 63 Query: 55 DI------AKIK--TQDIPDHDVL--LAGFPCQPFSQAG 83 + K++ + + D++ + G PC FS AG Sbjct: 64 SVDSEPLKRKVEFLIESLKKTDIVGFIGGPPCPDFSVAG 102 >gi|213692027|ref|YP_002322613.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523488|gb|ACJ52235.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 354 Score = 57.5 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG GG+ L L+Q V + Y+ N + + ++ ++ Sbjct: 10 IDLFCGTGGLSLGLKQG----GVRVVAGIDNAASCAYPYEENIKAKFVRKSVREVTGDEL 65 Query: 65 P------DHDVLLAGFPCQPFS 80 +L PCQPFS Sbjct: 66 KRLWGRSSVRLLAGCAPCQPFS 87 >gi|71899200|ref|ZP_00681363.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Ann-1] gi|71731058|gb|EAO33126.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Ann-1] Length = 387 Score = 57.5 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG+GG+ L + + +I+P ++AN + D+A++K + Sbjct: 17 VDLFCGVGGLTHGLARG----GISVAAGIDIDPNCQFPFEANNAALFLECDVARLKAAAV 72 Query: 65 P------DHDVLLAGFPCQPFS 80 D +L PCQPFS Sbjct: 73 KGFYQAADITLLAGCAPCQPFS 94 >gi|322708438|gb|EFZ00016.1| DNA (cytosine-5)-methyltransferase, putative [Metarhizium anisopliae ARSEF 23] Length = 1166 Score = 57.5 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 18/94 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--FPN--TLIFGDIA 57 L+ DLFCG G LE+ V ++++ N ++ TY AN PN + G I Sbjct: 682 LRGLDLFCGGGNFGRGLEEGGA---VRMSWANDCNARAIHTYMANCSHPNLMSPFLGSID 738 Query: 58 KIKTQ-----------DIPDHDVLLAGFPCQPFS 80 + + I D + G PC FS Sbjct: 739 DFQREAFSGNFSKSVPTIGSVDFISGGSPCPGFS 772 >gi|308183975|ref|YP_003928108.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180] gi|308059895|gb|ADO01791.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180] Length = 414 Score = 57.5 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 31/120 (25%), Gaps = 44/120 (36%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-------------YQAN----- 46 DLF G GG+ L T E + T Y+A Sbjct: 7 IDLFSGAGGLSLGFANTNR---FNILAHIEWEKPMITTLRNDLIKRFKISEYEARKRVIK 63 Query: 47 -------------FPNT--LIFGDIAKIKTQDI--------PDHDVLLAGFPCQPFSQAG 83 + + I+G DV+ G PCQ +S AG Sbjct: 64 FDIQKTDELINGSWSDETLKIYGSDNDESVSQFGLNGIISGKKIDVIFGGPPCQAYSLAG 123 >gi|83310850|ref|YP_421114.1| site-specific DNA methylase [Magnetospirillum magneticum AMB-1] gi|82945691|dbj|BAE50555.1| Site-specific DNA methylase [Magnetospirillum magneticum AMB-1] Length = 406 Score = 57.5 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 8/83 (9%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDIAKIKT 61 L G GG+ L L E + T A ++ D+A Sbjct: 3 LCAGAGGLELGLHIAL--PGYRTVGYVEREAGAAATLVARMADASLDTAPVWDDVATFDG 60 Query: 62 QDIPD-HDVLLAGFPCQPFSQAG 83 + D++ G+PCQ S AG Sbjct: 61 RPWRGIVDLVSGGYPCQGESNAG 83 >gi|291536942|emb|CBL10054.1| Site-specific DNA methylase [Roseburia intestinalis M50/1] Length = 840 Score = 57.5 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 25/100 (25%) Query: 2 LKITDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNTLIFGD 55 L LF G+G F EC ++E+ + + N F + I D Sbjct: 7 LTYISLFSCAGVGCF------GFKKAGFECIATNELIERRINVQKFNDKCKFDSGYICDD 60 Query: 56 IAKIKTQ-----DIPD--------HDVLLAGFPCQPFSQA 82 I +T+ +I DVL+A PCQ S A Sbjct: 61 ITTEETKNKIFAEIKKWEKMGNDKVDVLIATPPCQGMSVA 100 >gi|60544836|gb|AAX22756.1| DMT1 [Arabidopsis thaliana] Length = 1431 Score = 57.1 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L++ + ++ E + + ++ N P + +F Sbjct: 1064 LDIFAGCGGLSHGLKKAGVS---DAKWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAI 1120 Query: 54 ----GD----------------IAKIKTQDIP---DHDVLLAGFPCQPFS 80 GD + + + +P D + G PCQ FS Sbjct: 1121 MEKGGDQDDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGFS 1170 >gi|15239810|ref|NP_199727.1| MET1 (METHYLTRANSFERASE 1); methyltransferase [Arabidopsis thaliana] gi|462650|sp|P34881|DNMT1_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName: Full=DNA methyltransferase 01; AltName: Full=DNA methyltransferase 2; AltName: Full=DNA methyltransferase AthI; Short=DNA Metase AthI; Short=M.AthI; AltName: Full=DNA methyltransferase DDM2; AltName: Full=Protein DECREASED DNA METHYLATION 2 gi|304107|gb|AAA32829.1| cytosine-5 methyltransferase [Arabidopsis thaliana] gi|10177145|dbj|BAB10334.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana] gi|332008394|gb|AED95777.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana] Length = 1534 Score = 57.1 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L++ + ++ E + + ++ N P + +F Sbjct: 1096 LDIFAGCGGLSHGLKKAGVS---DAKWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAI 1152 Query: 54 ----GD----------------IAKIKTQDIP---DHDVLLAGFPCQPFS 80 GD + + + +P D + G PCQ FS Sbjct: 1153 MEKGGDQDDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGFS 1202 >gi|83950654|ref|ZP_00959387.1| modification methylase (Cytosine-specific methyltransferase [Roseovarius nubinhibens ISM] gi|83838553|gb|EAP77849.1| modification methylase (Cytosine-specific methyltransferase [Roseovarius nubinhibens ISM] Length = 504 Score = 57.1 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 45/132 (34%), Gaps = 53/132 (40%) Query: 4 ITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKTYQAN--------------- 46 I DLF G GG+ Q +++ S E+ +V+T + Sbjct: 7 IIDLFAGPGGLGEGFTQAGRAGDVSMKIQLSVEMEANAVQTLRLRSFLRRFGEEFPAEYY 66 Query: 47 --------FPN-----------------TLIFGD----------IAKIKTQDIPDHDVLL 71 FPN L+ GD I K++T D + +L+ Sbjct: 67 AALNKGVEFPNWSELYPEEWKHAEQEVRQLVLGDPGVFDEIAVVIDKVRT-DFQGNTILI 125 Query: 72 AGFPCQPFSQAG 83 G PCQ +S AG Sbjct: 126 GGPPCQAYSLAG 137 >gi|302184862|ref|ZP_07261535.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. syringae 642] Length = 529 Score = 57.1 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 46/132 (34%), Gaps = 50/132 (37%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT--YQANF--------PNTL 51 +I DLF G GG+ + + + S+E++P + KT +A F + Sbjct: 7 FQIVDLFSGPGGLSEGFASFKDGKQFKIIVSAEMDPIAHKTLMLRAYFRLLNSEAPDHKK 66 Query: 52 IFGD----IAKIKTQDIPDH---------------D---------------------VLL 71 + D I+K ++ +H D VL+ Sbjct: 67 DYYDYCNGISKKPYSNVTEHLWNKAKKEANCLTLGDEKDNFKLDTMIKDRLLSNQPWVLI 126 Query: 72 AGFPCQPFSQAG 83 G PCQ +S AG Sbjct: 127 GGPPCQAYSLAG 138 >gi|187934575|ref|YP_001885133.1| DNA methyltransferase [Clostridium botulinum B str. Eklund 17B] gi|187722728|gb|ACD23949.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum B str. Eklund 17B] Length = 213 Score = 57.1 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 23/88 (26%) Query: 2 LKITDLFCG---IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 +K+ +LF G IG + F E +S E N F N DI K Sbjct: 4 MKVLELFAGTRSIG-------KAFEKNGHE-VYSIEWNKD--------FENIDWNTDIGK 47 Query: 59 IKTQDIPDH----DVLLAGFPCQPFSQA 82 IK DI + DV+ A C +S A Sbjct: 48 IKANDILERFGKPDVIWASPDCTSYSIA 75 >gi|167625969|ref|YP_001676263.1| DNA-cytosine methyltransferase [Shewanella halifaxensis HAW-EB4] gi|167355991|gb|ABZ78604.1| DNA-cytosine methyltransferase [Shewanella halifaxensis HAW-EB4] Length = 530 Score = 57.1 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 4/49 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 + +LF G GG+ L LEQ+ E ++E++P + +++ NF N Sbjct: 1 MNHIELFSGCGGLSLGLEQS----GFELTMANELSPMAAESFAYNFFNE 45 >gi|307704727|ref|ZP_07641624.1| modification methylase, putative [Streptococcus mitis SK597] gi|307621706|gb|EFO00746.1| modification methylase, putative [Streptococcus mitis SK597] Length = 426 Score = 57.1 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 19/95 (20%) Query: 1 MLKITDLFC--GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIA 57 M LF GIG L L + +E + E+ + +Q N PN+ +F GDI Sbjct: 1 MKNAISLFSSSGIG--DLGL----HKNGIETVVACELLKERAELFQVNNPNSKVFNGDIW 54 Query: 58 KIKTQDIPDH---------DVLLAGFPCQPFSQAG 83 ++ DI D+ ++LA PCQ S G Sbjct: 55 EL-EDDIVDYYQTNFKGNPFIILATPPCQGMSSNG 88 >gi|325996923|gb|ADZ49131.1| adenine/cytosine specific DNA methyltransferase [Helicobacter pylori 2017] Length = 822 Score = 57.1 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 22/99 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNTLIFGDIA 57 L LF G G L EC ++EI + + N F I GDI Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEILEKRLNIQRINNKCKFDEGYICGDIK 62 Query: 58 KIKTQD-IPD-------------HDVLLAGFPCQPFSQA 82 +++ ++ I D+++A PCQ S A Sbjct: 63 ELEIKEKILKQIGFYSKKFGNDRVDLVVATPPCQGMSVA 101 >gi|307636739|gb|ADN79189.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori 908] gi|325995325|gb|ADZ50730.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori 2018] Length = 822 Score = 57.1 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 22/99 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNTLIFGDIA 57 L LF G G L EC ++EI + + N F I GDI Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEILEKRLNIQRINNKCKFDEGYICGDIK 62 Query: 58 KIKTQD-IPD-------------HDVLLAGFPCQPFSQA 82 +++ ++ I D+++A PCQ S A Sbjct: 63 ELEIKEKILKQIGFYSKKFGNDRVDLVVATPPCQGMSVA 101 >gi|294664029|ref|ZP_06729437.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292606198|gb|EFF49441.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 370 Score = 57.1 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 14/91 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--FPNTLIFGDIAKI 59 K+ DLF L E S E + + T +AN ++ GD++ + Sbjct: 6 FKVIDLFA----GAGGLGVGAYQAGAEVAASVESDSVACDTLRANADIHGQVLEGDVSLL 61 Query: 60 KTQD------IPDHDVL--LAGFPCQPFSQA 82 +D + DVL + G PCQPFS+A Sbjct: 62 SGKDVLTMARLSKGDVLVVVGGPPCQPFSKA 92 >gi|296084836|emb|CBI27718.3| unnamed protein product [Vitis vinifera] Length = 1429 Score = 57.1 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+Q+ ++ E + ++ N P +L+F Sbjct: 994 LDIFAGCGGLSEGLQQSGVSV---TKWAIEYEEPAGDAFKLNHPESLMFINNCNVILRAV 1050 Query: 54 ----GD----IA------------KIKTQDIP---DHDVLLAGFPCQPFS 80 GD I+ + ++P D + G PCQ FS Sbjct: 1051 MEKCGDDDDCISTSEAAELAAALGEKDINNLPLPGQVDFINGGPPCQGFS 1100 >gi|312901967|ref|ZP_07761229.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0470] gi|311290903|gb|EFQ69459.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0470] Length = 412 Score = 57.1 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 35/127 (27%), Gaps = 49/127 (38%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA---------------- 45 + I DLF G GG+ + E++ + + + Sbjct: 1 MNIIDLFSGCGGLTEGF----RIKQFNMVCHIEMDKDACNSLRTREAYQYMKEKKDLSMY 56 Query: 46 -------------------NFPNTLIFGDIA----------KIKTQDIPDHDVLLAGFPC 76 N N +I +I+ I D D ++ G PC Sbjct: 57 NSYLLGKIQRDELYKSIPINLMNKIINCEISCSTINNLIKKIIDLSDGETIDGIIGGPPC 116 Query: 77 QPFSQAG 83 Q +S G Sbjct: 117 QAYSTIG 123 >gi|242780736|ref|XP_002479658.1| C-5 cytosine methyltransferase DmtA [Talaromyces stipitatus ATCC 10500] gi|218719805|gb|EED19224.1| C-5 cytosine methyltransferase DmtA [Talaromyces stipitatus ATCC 10500] Length = 611 Score = 57.1 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 11/84 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-D----IAK 58 D FCG GG+ + + + + +I+ + KT+ NF ++ + D IA Sbjct: 299 FGDAFCGAGGVSVGAWKA----GLRVKYGIDIDKAACKTWGTNFVHSDCYHADFYSWIA- 353 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQA 82 ++ ++ D+ + PCQPFS A Sbjct: 354 LQDDEV-RVDISHSSPPCQPFSPA 376 >gi|225683838|gb|EEH22122.1| c5 cytosine methyltransferase DmtA [Paracoccidioides brasiliensis Pb03] Length = 571 Score = 57.1 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI- 59 D FCG GG+ Q N + + + ++ +Y+ NF + + D+A Sbjct: 300 YTFGDGFCGAGGVSRGALQAGLQLN----WGFDHSVAAMNSYRLNFETAIGYTSDVADFL 355 Query: 60 --KTQDIPDHDVLLAGFPCQPFSQA 82 T +I D+L PCQ FS A Sbjct: 356 ANNTDEI-IIDILHFSPPCQTFSPA 379 >gi|156055406|ref|XP_001593627.1| hypothetical protein SS1G_05055 [Sclerotinia sclerotiorum 1980] gi|154702839|gb|EDO02578.1| hypothetical protein SS1G_05055 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1126 Score = 57.1 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 18/94 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF---GDI-- 56 L D FCG GG + + + +P++ T++ NFP + D Sbjct: 722 LTYGDAFCGAGGTTRGAVMA----GLRVKWGFDFDPHACTTWRLNFPYATCYEMSSDRFV 777 Query: 57 --------AKIKTQDIPDHDVLLAGFPCQPFSQA 82 + D+ D+L PCQ FS A Sbjct: 778 ALATPSPYSSFTPNDV-KVDILHLSPPCQYFSPA 810 >gi|255280097|ref|ZP_05344652.1| site-specific DNA methylase [Bryantella formatexigens DSM 14469] gi|255269188|gb|EET62393.1| site-specific DNA methylase [Bryantella formatexigens DSM 14469] Length = 351 Score = 57.1 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 I DLF G GG +E V+ + + +P +++ ++ N P TL D+ ++ Q Sbjct: 6 IIDLFAGGGGASTGIEMALGRH-VDI--AVDHDPEAIRIHKTNHPGTLHLTEDVFRVNLQ 62 Query: 63 DI---PDHDVLLAGFPCQPFSQA 82 + ++ A C FS+A Sbjct: 63 EYVKGRHVALMWASPDCTQFSRA 85 >gi|225463167|ref|XP_002267200.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1549 Score = 57.1 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+Q+ ++ E + ++ N P +L+F Sbjct: 1114 LDIFAGCGGLSEGLQQSGVSV---TKWAIEYEEPAGDAFKLNHPESLMFINNCNVILRAV 1170 Query: 54 ----GD----IA------------KIKTQDIP---DHDVLLAGFPCQPFS 80 GD I+ + ++P D + G PCQ FS Sbjct: 1171 MEKCGDDDDCISTSEAAELAAALGEKDINNLPLPGQVDFINGGPPCQGFS 1220 >gi|218192371|gb|EEC74798.1| hypothetical protein OsI_10599 [Oryza sativa Indica Group] Length = 1760 Score = 57.1 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 10/65 (15%) Query: 4 ITDLFCGIG----GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 + DL+ G G G+ L F+ N+E ++ +IN Y+ + + N P + + Sbjct: 455 LLDLYSGCGAMSTGLCLGF--AFSGINLETRWAVDINKYACASLKHNHP----YSQVRNE 508 Query: 60 KTQDI 64 KT+D Sbjct: 509 KTEDF 513 Score = 35.5 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 8/14 (57%) Query: 67 HDVLLAGFPCQPFS 80 DV+ G PCQ S Sbjct: 627 VDVICGGPPCQGIS 640 >gi|2832630|emb|CAA16759.1| putative protein [Arabidopsis thaliana] gi|7268696|emb|CAB78904.1| putative protein [Arabidopsis thaliana] Length = 1171 Score = 57.1 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGD 55 + DL+ G GG+ L V+ ++ + N + K+ + N PNT + D Sbjct: 678 VLDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRND 731 >gi|14583094|gb|AAK69757.1|AF383171_1 chromomethylase CMT2 [Arabidopsis thaliana] Length = 1244 Score = 57.1 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGD 55 + DL+ G GG+ L V+ ++ + N + K+ + N PNT + D Sbjct: 678 VLDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRND 731 >gi|42566945|ref|NP_193637.2| CMT2 (chromomethylase 2); DNA binding / chromatin binding [Arabidopsis thaliana] gi|322510132|sp|Q94F87|CMT2_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT2; AltName: Full=Chromomethylase 2; AltName: Full=Protein CHROMOMETHYLASE 2 gi|332658726|gb|AEE84126.1| chromomethylase 2 [Arabidopsis thaliana] Length = 1295 Score = 57.1 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGD 55 + DL+ G GG+ L V+ ++ + N + K+ + N PNT + D Sbjct: 729 VLDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRND 782 >gi|317013479|gb|ADU80915.1| type II R-M system methyltransferase [Helicobacter pylori Gambia94/24] Length = 822 Score = 56.7 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 22/99 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNTLIFGDIA 57 L LF G G L EC ++EI + + N F I GDI Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEILEKRLNIQRINHKCKFDEGYICGDIK 62 Query: 58 KIKTQD-IPD-------------HDVLLAGFPCQPFSQA 82 +++ ++ I D+++A PCQ S A Sbjct: 63 ELEIKEKILKRIGFYSKNFGNDRVDLVVATPPCQGMSVA 101 >gi|226293221|gb|EEH48641.1| C-5 cytosine methyltransferase DmtA [Paracoccidioides brasiliensis Pb18] Length = 654 Score = 56.7 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI- 59 D FCG GG+ Q N + + + ++ +Y+ NF + + D+A Sbjct: 327 YTFGDGFCGAGGVSRGALQAGLRLN----WGFDHSVAAMNSYRLNFETAIGYTSDVADFL 382 Query: 60 --KTQDIPDHDVLLAGFPCQPFSQA 82 T +I D+L PCQ FS A Sbjct: 383 ANNTDEI-IIDILHFSPPCQTFSPA 406 >gi|120609258|ref|YP_968936.1| DNA-cytosine methyltransferase [Acidovorax citrulli AAC00-1] gi|120587722|gb|ABM31162.1| DNA-cytosine methyltransferase [Acidovorax citrulli AAC00-1] Length = 486 Score = 56.7 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----KIKTQD 63 GI + + + + +E + ++ FP GD+ +I+ ++ Sbjct: 17 CSGI----EAVSLAWEPLGLRPAWFAETDAFASAVLAHRFPQVPNLGDMTLLARRIRARE 72 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 + VL+ G PCQ FS AG Sbjct: 73 VAAPAVLVGGTPCQSFSTAG 92 >gi|159461698|gb|ABW96888.1| MET1-type DNA-methyltransferase [Elaeis guineensis] Length = 1543 Score = 56.7 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59 D+F G GG+ L+Q+ ++ E + + + N P TL+F D + Sbjct: 1108 LDIFAGCGGLSAGLQQSGVSF---TKWAIEYEQPAGEAFSENHPETLMFIDNCNVILRAI 1164 Query: 60 --------------------------KTQDIP---DHDVLLAGFPCQPFS 80 K +++P + D + G PCQ FS Sbjct: 1165 MEKCGDADDCVATDEAVKLATGLDEEKLKNLPMPGEVDFINGGPPCQGFS 1214 >gi|126341517|ref|XP_001377353.1| PREDICTED: similar to putative DNA methyltransferase [Monodelphis domestica] Length = 384 Score = 56.7 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIKTQDIP--DHDVLLAGFPCQPFSQAG 83 E + ++N + + Y+ NFP+T ++ I I ++ +++L PCQPF++ G Sbjct: 19 EVVAAVDVNTIANEVYKHNFPHTQLWAKTIEGITLKEFNQLSFNMILMSPPCQPFTRIG 77 >gi|289810948|ref|ZP_06541577.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 121 Score = 56.7 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI 35 + DLF GIGGIR E +C F+SE Sbjct: 92 FRFIDLFAGIGGIRRGFEA----IGGQCVFTSEW 121 >gi|321467881|gb|EFX78869.1| Dpahnia pulex DNMT3 [Daphnia pulex] Length = 480 Score = 56.7 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57 L++ LF GIG + L + VE +++SE+ + + L G++ Sbjct: 197 LRVLSLFDGIGTGLVALRKLG--IEVEVYYASEVLTAAATVSRTRLGGVLHHIGSVGEVT 254 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 + + ++I +L+ G PC FS Sbjct: 255 QQRLEEISPIHLLIGGSPCNDFS 277 >gi|110740122|dbj|BAF01962.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana] Length = 603 Score = 56.7 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L++ + ++ E + + ++ N P + +F Sbjct: 165 LDIFAGCGGLSHGLKKAGVS---DAKWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAI 221 Query: 54 ----GD----------------IAKIKTQDIP---DHDVLLAGFPCQPFS 80 GD + + + +P D + G PCQ FS Sbjct: 222 MEKGGDQDDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGFS 271 >gi|85709919|ref|ZP_01040984.1| site-specific DNA-methyltransferase [Erythrobacter sp. NAP1] gi|85688629|gb|EAQ28633.1| site-specific DNA-methyltransferase [Erythrobacter sp. NAP1] Length = 356 Score = 56.7 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 10/83 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLFCG+G + L+Q + + ++ N +T D++K+ ++ Sbjct: 14 VVDLFCGVGALSHGLKQA----GFAIRAGYDTDRRCKFAFETNNDSTFHARDVSKLTAKE 69 Query: 64 IPDH---D---VLLAGFPCQPFS 80 + H D VL PCQPFS Sbjct: 70 VRAHFSGDKPSVLAGCAPCQPFS 92 >gi|10257413|gb|AAG15406.1| cytosine-5 DNA methyltransferase MET1 [Zea mays] Length = 784 Score = 56.7 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+Q ++ E + + + N P ++F Sbjct: 343 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFNKNHPEAVVFVDNCNVILKAI 399 Query: 54 ----GD----------------IAKIKTQDIP---DHDVLLAGFPCQPFS 80 GD + ++ ++P + + + G PCQ FS Sbjct: 400 MDKCGDTDDCVSTSEAAEQAAKLPEVNINNLPVPGEVEFINGGPPCQGFS 449 >gi|46128541|ref|XP_388824.1| hypothetical protein FG08648.1 [Gibberella zeae PH-1] Length = 602 Score = 56.7 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---D--I 56 + D G GG+ + ++ + P +TY+ NFP+T +F D I Sbjct: 254 YTMFDSCSGAGGVSRGALMA----GFKIQYAIDKAPEVWETYETNFPDTELFRMPLDEFI 309 Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82 A+ D+L PCQ FS A Sbjct: 310 AEPNVGH-KRVDILHFSPPCQFFSPA 334 >gi|296814932|ref|XP_002847803.1| DNA methyltransferase Dim-2 [Arthroderma otae CBS 113480] gi|238840828|gb|EEQ30490.1| DNA methyltransferase Dim-2 [Arthroderma otae CBS 113480] Length = 1099 Score = 56.7 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 18/96 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 LK +LF G G LE+ ++ ++ E + + TY+AN PN L G + Sbjct: 639 LKALNLFSGGGTFDRGLEEG---TAIQSKWAVEWSLPQMLTYRANHPNGKDLKLFCGSVN 695 Query: 58 K-----IKTQD------IPDHDVLLAGFPCQPFSQA 82 I+ + I + ++ AG PCQ + A Sbjct: 696 DYLFQAIQGNENEYIARIGEVQIISAGSPCQGYCSA 731 >gi|303290208|ref|XP_003064391.1| predicted protein [Micromonas pusilla CCMP1545] gi|226453989|gb|EEH51296.1| predicted protein [Micromonas pusilla CCMP1545] Length = 1005 Score = 56.7 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 5/75 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK+ LF G G + L Q + E +E +P + + A F D A ++ Sbjct: 11 LKVASLFSGCGVLDYGLTQAGH----EIVLQTESDPDAREVLAARFQGICQPTDPATVEC 66 Query: 62 QDIPDHDVLLAGFPC 76 PD DVL A C Sbjct: 67 LP-PDADVLAASVVC 80 >gi|170088424|ref|XP_001875435.1| C5-DNA-methyltransferase [Laccaria bicolor S238N-H82] gi|164650635|gb|EDR14876.1| C5-DNA-methyltransferase [Laccaria bicolor S238N-H82] Length = 1309 Score = 56.7 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 48/122 (39%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-----------------ANFP 48 +LF G GG+ L ++ + VE ++ E +P + KTY+ N P Sbjct: 798 ELFSGAGGLGLGIDMSGF---VETKYAVEFSPSAAKTYKCRETYFLCIFYAYLFTRTNNP 854 Query: 49 NTLIFG-D--------IAKIKTQDIPD-------------------HDVLLAGFPCQPFS 80 + L++ D +AK ++ P D + G PCQ FS Sbjct: 855 DVLVYNQDSSTLLQQALAKDNGKNPPPLLSKDGKTHCPEMPQKGCQVDFIFGGPPCQSFS 914 Query: 81 QA 82 A Sbjct: 915 LA 916 >gi|227431296|ref|ZP_03913349.1| DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352889|gb|EEJ43062.1| DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 367 Score = 56.7 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 16/92 (17%) Query: 2 LKITDLFC--GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDI-- 56 + LF GIG E + V ++E+ P + Y+ +P+ ++ GDI Sbjct: 6 MNGMSLFASSGIG------EYYLDRAGVNVVVANELIPKRGELYRKIYPHHKMVIGDILD 59 Query: 57 ----AKIKTQDIPD-HDVLLAGFPCQPFSQAG 83 ++I I + D ++A PCQ S AG Sbjct: 60 ENVFSEISRTAIENNVDFMIASPPCQGISVAG 91 >gi|222624499|gb|EEE58631.1| hypothetical protein OsJ_09996 [Oryza sativa Japonica Group] Length = 1033 Score = 56.7 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 10/65 (15%) Query: 4 ITDLFCGIG----GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 + DL+ G G G+ L F+ N+E ++ +IN Y+ + N P + + Sbjct: 455 LLDLYSGCGAMSTGLCLGF--AFSGINLETRWAVDINKYACACLKHNHP----YSQVRNE 508 Query: 60 KTQDI 64 KT+D Sbjct: 509 KTEDF 513 Score = 35.5 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 8/14 (57%) Query: 67 HDVLLAGFPCQPFS 80 DV+ G PCQ S Sbjct: 627 VDVICGGPPCQGIS 640 >gi|24421681|gb|AAN60988.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa Japonica Group] gi|108706955|gb|ABF94750.1| C-5 cytosine-specific DNA methylase family protein, expressed [Oryza sativa Japonica Group] Length = 1761 Score = 56.7 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 10/65 (15%) Query: 4 ITDLFCGIG----GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 + DL+ G G G+ L F+ N+E ++ +IN Y+ + N P + + Sbjct: 455 LLDLYSGCGAMSTGLCLGF--AFSGINLETRWAVDINKYACACLKHNHP----YSQVRNE 508 Query: 60 KTQDI 64 KT+D Sbjct: 509 KTEDF 513 Score = 35.5 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 8/14 (57%) Query: 67 HDVLLAGFPCQPFS 80 DV+ G PCQ S Sbjct: 627 VDVICGGPPCQGIS 640 >gi|190571760|ref|YP_001966439.1| M1.LlaJI [Lactococcus lactis] gi|46487639|gb|AAS99177.1| M1.LlaJI [Lactococcus lactis] Length = 465 Score = 56.7 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + LF IG E ++ ++E+ YQ +P +I GDI Sbjct: 91 INALSLFANIG----VAEAYLEDIGIDVVVANELEERRAILYQKIYPKSHMICGDITDKS 146 Query: 61 TQDIPD-------HDVLLAGFPCQPFSQAG 83 +D D+++A PCQ S AG Sbjct: 147 IEDKIIKESKEKKVDLVMATPPCQGMSTAG 176 >gi|254787981|ref|YP_003075410.1| DNA-methyltransferase [Teredinibacter turnerae T7901] gi|237687098|gb|ACR14362.1| DNA-methyltransferase [Teredinibacter turnerae T7901] Length = 380 Score = 56.7 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 34/105 (32%), Gaps = 32/105 (30%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI---FGD--IA 57 K+ F G G + E+ E F +EI + Y+ N + + D I Sbjct: 5 KVFSFFSGSGFLDFGFEKA----GFEIVFVNEIFKPFLDAYKYTRNNKIPEFGYSDTCIE 60 Query: 58 KIKTQDIPDHDVL-------------------LAGFPCQPFSQAG 83 I + DV+ + G PC FS AG Sbjct: 61 SILESE----DVIETLKSNLRKCKRNGFHTGFIGGPPCPDFSNAG 101 >gi|302918673|ref|XP_003052704.1| hypothetical protein NECHADRAFT_35564 [Nectria haematococca mpVI 77-13-4] gi|256733644|gb|EEU46991.1| hypothetical protein NECHADRAFT_35564 [Nectria haematococca mpVI 77-13-4] Length = 614 Score = 56.7 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 18/86 (20%) Query: 7 LF---CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 LF G GG+ + ++ + P TY+ NFP+T +F K+ + Sbjct: 253 LFDSCSGAGGVSRGALMA----GFKIQYAIDKAPEVWDTYETNFPDTHLF----KMSLDE 304 Query: 64 IPDH-------DVLLAGFPCQPFSQA 82 DVL PCQ FS A Sbjct: 305 FLSFDNQHMRVDVLHFSPPCQFFSPA 330 >gi|221119972|ref|XP_002165825.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 919 Score = 56.7 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60 L++ LF G+ L L + ++ + +SEI+P ++K + + GD+ KI Sbjct: 624 LRVLSLFDGLSTGYLALSELG--LDILSYHASEIDPLAIKVSKVHHSMRVEQIGDVQKIT 681 Query: 61 TQDIPD---HDVLLAGFPCQPFSQA 82 QDI + D+++ G PC S A Sbjct: 682 KQDIENWGPFDLVIGGSPCDELSIA 706 >gi|307330114|ref|ZP_07609264.1| C-5 cytosine-specific DNA methylase [Streptomyces violaceusniger Tu 4113] gi|306884257|gb|EFN15293.1| C-5 cytosine-specific DNA methylase [Streptomyces violaceusniger Tu 4113] Length = 366 Score = 56.7 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 25/61 (40%) Query: 23 NHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 + N + E +FP+ G++ + + D+L AGFPCQ S A Sbjct: 5 HVFNARTVWHCENAAAPAAVLAHHFPDVPNLGNLKAVDFTGVEGVDILAAGFPCQDVSIA 64 Query: 83 G 83 G Sbjct: 65 G 65 >gi|328947445|ref|YP_004364782.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] gi|328447769|gb|AEB13485.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489] Length = 445 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 8/84 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD---I-AKI 59 + + GI + N + + SEI + + +PN GD I KI Sbjct: 6 VGSICSGI----EAASVAWKDFNFDFKWFSEIAEFQSNFLRIKYPNIKNLGDMNLIGKKI 61 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 T +I D++ G PCQ FS AG Sbjct: 62 ATAEIDSPDLICGGTPCQAFSLAG 85 >gi|117307345|dbj|BAF36443.1| DNA methyltransferase type 1 [Nicotiana tabacum] Length = 1558 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+++ + ++ E + ++ N P +F Sbjct: 1123 LDIFAGCGGLSEGLQRSGVS---DTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVILRAV 1179 Query: 54 ----GD----IAKIKTQDIP---------------DHDVLLAGFPCQPFS 80 GD I+ + ++ D + G PCQ FS Sbjct: 1180 MQKCGDAEDCISTSEASELAAAMDENELNSLPLPGQVDFINGGPPCQGFS 1229 >gi|209550032|ref|YP_002281949.1| C-5 cytosine-specific DNA methylase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535788|gb|ACI55723.1| C-5 cytosine-specific DNA methylase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 646 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 7/87 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +K+ DL CG GG ++ +E + P ++ T+Q NFP + DIA Sbjct: 5 IKVADLLCGAGGSSAGAKRALEEMGLEMELVCVNHW-PTAIDTHQRNFPEARHYIQDIAT 63 Query: 59 IKTQDI-PD--HDVLLAGFPCQPFSQA 82 ++ + P+ D+L+A C S A Sbjct: 64 VRPHILVPEGYLDLLMASPTCTHHSVA 90 >gi|153870382|ref|ZP_01999795.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] gi|152073154|gb|EDN70207.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS] Length = 349 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 10/80 (12%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP- 65 FCGIGG + + +I+ ++ N + + DIAK+ + Sbjct: 4 FFCGIGGFSYGI----YKSGLRIDAGVDIDNSCQYAFETNCKSKFLCEDIAKLTGTRVNA 59 Query: 66 -----DHDVLLAGFPCQPFS 80 D VL+ PCQPFS Sbjct: 60 LYTKNDIKVLVGCAPCQPFS 79 >gi|218905512|ref|YP_002453346.1| modification methylase ScrFIB [Bacillus cereus AH820] gi|218536933|gb|ACK89331.1| modification methylase ScrFIB [Bacillus cereus AH820] Length = 324 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 6/82 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M+KI +LF GIG R L + + E VK Y A + + D+ Sbjct: 1 MIKILELFGGIGAPRKALVNLG--IDHKAIDYVEWQANRVKAYNALYDHLHKPQDVRGWN 58 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 D+L+ G PCQ S+A Sbjct: 59 L----KPDILVHGSPCQDNSRA 76 >gi|320031459|gb|EFW13422.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 1040 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 18/96 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L+ +LFCG G LE+ + ++ E + + TY+AN N L G + Sbjct: 532 LRALNLFCGGGTFDRGLEEG---TAIRSEWAVEWDLPPMLTYRANHTNPEDVKLFRGSVD 588 Query: 58 KIKTQDIP-----------DHDVLLAGFPCQPFSQA 82 I + + AG PCQ +S A Sbjct: 589 DFLAVAIRGQGSDLVAKLGQVEFISAGSPCQGYSLA 624 >gi|303310981|ref|XP_003065502.1| DNA (cytosine-5)-methyltransferase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240105164|gb|EER23357.1| DNA (cytosine-5)-methyltransferase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 1117 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 18/96 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L+ +LFCG G LE+ + ++ E + + TY+AN N L G + Sbjct: 609 LRALNLFCGGGTFDRGLEEG---TAIRSEWAVEWDLPPMLTYRANHTNPEDVKLFRGSVD 665 Query: 58 KIKTQDIP-----------DHDVLLAGFPCQPFSQA 82 I + + AG PCQ +S A Sbjct: 666 DFLAVAIRGQGSDLVAKLGQVEFISAGSPCQGYSLA 701 >gi|119194775|ref|XP_001247991.1| hypothetical protein CIMG_01762 [Coccidioides immitis RS] Length = 1040 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 18/96 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L+ +LFCG G LE+ + ++ E + + TY+AN N L G + Sbjct: 532 LRALNLFCGGGTFDRGLEEG---TAIRSEWAVEWDLPPMLTYRANHTNPEEVKLFRGSVD 588 Query: 58 KIKTQDIP-----------DHDVLLAGFPCQPFSQA 82 I + + AG PCQ +S A Sbjct: 589 DFLAVAIRGQRSDLVAKLGQVEFISAGSPCQGYSLA 624 >gi|255568838|ref|XP_002525390.1| conserved hypothetical protein [Ricinus communis] gi|223535353|gb|EEF37028.1| conserved hypothetical protein [Ricinus communis] Length = 479 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 15/88 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGD 55 + + LF GIGG + L + N S EI+ + ++ + T + GD Sbjct: 340 ITVLSLFSGIGGAEVALHRLGIPLNS--VVSVEISEVNRNIPRSWWEQTNQKGYLIEIGD 397 Query: 56 IAKIKTQDIPD-------HDVLLAGFPC 76 + ++ I D+++ G PC Sbjct: 398 VREVDGDSIKRWIKLFGGFDLVIGGSPC 425 >gi|7288140|dbj|BAA92852.1| DNA (cytosine-5-)-methyltransferase [Nicotiana tabacum] gi|56130955|gb|AAV80209.1| cytosine-5-methyltransferase [Nicotiana tabacum] Length = 1556 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+++ + ++ E + ++ N P +F Sbjct: 1121 LDIFAGCGGLSEGLQRSGVS---DTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVILRAV 1177 Query: 54 ----GD----IAKIKTQDIP---------------DHDVLLAGFPCQPFS 80 GD I+ + ++ D + G PCQ FS Sbjct: 1178 MQKCGDAENCISTSEASELAAAMDENELNSLPLPGQVDFINGGPPCQGFS 1227 >gi|260439066|ref|ZP_05792882.1| C-5 cytosine-specific DNA methylase family protein [Butyrivibrio crossotus DSM 2876] gi|292808523|gb|EFF67728.1| C-5 cytosine-specific DNA methylase family protein [Butyrivibrio crossotus DSM 2876] Length = 428 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 17/93 (18%) Query: 2 LKITDLFC--GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 LF GIG L L + + + EI + ++ N PNT F GDI K Sbjct: 5 YNAISLFSSSGIG--DLGL----HANGINTVTACEIIEERMALFKNNNPNTKCFCGDIWK 58 Query: 59 IKTQDIPDHD--------VLLAGFPCQPFSQAG 83 ++ I D++ ++LA PCQ S G Sbjct: 59 LEKDIIDDYNERFSENPFLILATPPCQGMSPNG 91 >gi|159481068|ref|XP_001698604.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas reinhardtii] gi|158282344|gb|EDP08097.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas reinhardtii] Length = 2204 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 37/109 (33%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD---------- 55 D+F G GG+ Q E ++ E + + ++ N P+T +F D Sbjct: 1730 DIFAGCGGLSEGFHQAGVA---ESRWAIEYDREAADAFKLNNPHTTVFCDNCNVLLRAAM 1786 Query: 56 ------------------IAKIKTQ---DIP---DHDVLLAGFPCQPFS 80 ++ Q D+P +++ G PCQ +S Sbjct: 1787 VKAGLEADCVSDPAAVEAARRLDPQVVADLPAPGAVGLMMGGPPCQGYS 1835 >gi|297739809|emb|CBI29991.3| unnamed protein product [Vitis vinifera] Length = 827 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 11/86 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKI 59 + + DL+ G G + L + ++ ++ +INP++ ++ + N P T + Sbjct: 252 MTLLDLYSGCGAMSTGLCLGASLSGLKLVTRWAVDINPHACESLKLNHPETE----VRNE 307 Query: 60 KTQDIPDHDVL--LAGFPCQPFSQAG 83 +D +L A C+ FS G Sbjct: 308 AAEDFLS--LLKEWATL-CEDFSLLG 330 Score = 34.0 bits (78), Expect = 6.5, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 8/15 (53%) Query: 66 DHDVLLAGFPCQPFS 80 D D + G PCQ S Sbjct: 433 DVDFICGGPPCQGVS 447 >gi|225441510|ref|XP_002275932.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 829 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 11/86 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKI 59 + + DL+ G G + L + ++ ++ +INP++ ++ + N P T + Sbjct: 254 MTLLDLYSGCGAMSTGLCLGASLSGLKLVTRWAVDINPHACESLKLNHPETE----VRNE 309 Query: 60 KTQDIPDHDVL--LAGFPCQPFSQAG 83 +D +L A C+ FS G Sbjct: 310 AAEDFLS--LLKEWATL-CEDFSLLG 332 Score = 34.0 bits (78), Expect = 6.5, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 8/15 (53%) Query: 66 DHDVLLAGFPCQPFS 80 D D + G PCQ S Sbjct: 435 DVDFICGGPPCQGVS 449 >gi|119714083|ref|YP_919225.1| C-5 cytosine-specific DNA methylase [Nocardioides sp. JS614] gi|119525992|gb|ABL79362.1| C-5 cytosine-specific DNA methylase [Nocardioides sp. JS614] Length = 615 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 15/86 (17%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI------ 59 DLF G GG+ +E+ ++ N Y VK ++AN P+ + IA + Sbjct: 23 DLFSGFGGLTQGIERAGFTA---IVAAN-HNEYKVKVHEANHPHVEHW--IADLVDPDSS 76 Query: 60 ---KTQDIPDHDVLLAGFPCQPFSQA 82 +++P D+L AG C S A Sbjct: 77 DYHSVRELPPVDLLAAGVSCVNHSPA 102 >gi|313113251|ref|ZP_07798865.1| hypothetical protein HMPREF9436_00710 [Faecalibacterium cf. prausnitzii KLE1255] gi|310624430|gb|EFQ07771.1| hypothetical protein HMPREF9436_00710 [Faecalibacterium cf. prausnitzii KLE1255] Length = 66 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 21/63 (33%), Gaps = 4/63 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGGI L E E + +++P F DI + Sbjct: 3 LTHFSLFSGIGGIDLAAEAA----GFTSVCQCEWAAFPAAVLASHWPEVPRFQDITTVTK 58 Query: 62 QDI 64 + Sbjct: 59 EAF 61 >gi|108705798|gb|ABF93593.1| DNA cytosine methyltransferase Zmet3, putative, expressed [Oryza sativa Japonica Group] Length = 507 Score = 56.3 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + H ++ S E + + ++ + T + D+ Sbjct: 384 MNVLSLFSGIGGAEVALHRLGIH--MKTVISVEKSEVNRTILKSWWDQTQTGTLIEIADV 441 Query: 57 AKIKTQDIP-------DHDVLLAGFPC 76 + T+ I D+++ G PC Sbjct: 442 RHLTTERIETFIRRFGGFDLVIGGSPC 468 >gi|119173265|ref|XP_001239116.1| hypothetical protein CIMG_10138 [Coccidioides immitis RS] Length = 626 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 13/87 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 D FCG GG+ Q H + + P ++ TY+ NF + G+ ++ Sbjct: 328 YTFGDGFCGAGGVSRGALQAGLH----VRWGFDKCPKAMDTYRLNFRTAV--GETCEVVH 381 Query: 60 ----KTQDIPDHDVLLAGFPCQPFSQA 82 +T+DI D++ PCQ FS A Sbjct: 382 FLTNETKDI-MVDIMHFSPPCQTFSPA 407 >gi|154302575|ref|XP_001551697.1| hypothetical protein BC1G_09864 [Botryotinia fuckeliana B05.10] gi|150855353|gb|EDN30545.1| hypothetical protein BC1G_09864 [Botryotinia fuckeliana B05.10] Length = 1126 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 33/93 (35%), Gaps = 16/93 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKI 59 D FCG GG + + + + ++ T++ NFP + + Sbjct: 731 YTYGDAFCGAGGTTRGAVMA----GLRVKWGFDFDQHACTTWRLNFPGATCYEMSSERFV 786 Query: 60 K-------TQDIP---DHDVLLAGFPCQPFSQA 82 + +IP D+L PCQ FS A Sbjct: 787 SLATPSPCSSNIPNDVKVDILHLSPPCQYFSPA 819 >gi|169977306|emb|CAQ18900.1| DNA (cytosine-5) methyltransferase [Nicotiana sylvestris] Length = 1558 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+++ + ++ E + ++ N P +F Sbjct: 1123 LDIFAGCGGLSEGLQRSGVS---DTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVFLRVV 1179 Query: 54 ----GD----IAKIKTQDIP---------------DHDVLLAGFPCQPFS 80 GD I+ + ++ D + G PCQ FS Sbjct: 1180 MQKCGDAEDCISTPEASELAAAMDESELNSLPLPGQVDFINGGPPCQGFS 1229 >gi|226088550|dbj|BAH37020.1| chromomethylase OsMET2b [Oryza sativa Japonica Group] Length = 690 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 10/65 (15%) Query: 4 ITDLFCGIG----GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 + DL+ G G G+ L F+ N+E ++ +IN Y+ + N P + + Sbjct: 173 LLDLYSGCGAMSTGLCLGF--AFSGINLETRWAVDINKYACACLKHNHP----YSQVRNE 226 Query: 60 KTQDI 64 KT+D Sbjct: 227 KTEDF 231 Score = 35.1 bits (81), Expect = 3.2, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 8/14 (57%) Query: 67 HDVLLAGFPCQPFS 80 DV+ G PCQ S Sbjct: 345 VDVICGGPPCQGIS 358 >gi|225463169|ref|XP_002267284.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1535 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+Q+ ++ E + ++ N P + +F Sbjct: 1100 LDIFAGCGGLSEGLQQSGVSV---TKWAIEYEEPAGDAFKLNHPESSMFINNCNVILRAV 1156 Query: 54 ----GD-------------IAKIKTQDIPD------HDVLLAGFPCQPFS 80 GD + +DI + D + G PCQ FS Sbjct: 1157 MEKCGDADDCLSTSEAAELATSLGEKDINNLPLPGQVDFINGGPPCQGFS 1206 >gi|224144433|ref|XP_002325288.1| DNA methyltransferase [Populus trichocarpa] gi|222862163|gb|EEE99669.1| DNA methyltransferase [Populus trichocarpa] Length = 1549 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+Q ++ E + + ++ N +L+F Sbjct: 1115 LDIFAGCGGLSEGLQQAGVST---TKWAIEYEEPAGEAFKLNHAESLMFINNCNVILRAV 1171 Query: 54 ----GD----IAK--------------IKTQDIP-DHDVLLAGFPCQPFS 80 GD I+ I +P D + G PCQ FS Sbjct: 1172 MERCGDADDCISTSEAAKMASSLDAKVIDGLPLPGQVDFINGGPPCQGFS 1221 >gi|212526390|ref|XP_002143352.1| C-5 cytosine methyltransferase DmtA [Penicillium marneffei ATCC 18224] gi|210072750|gb|EEA26837.1| C-5 cytosine methyltransferase DmtA [Penicillium marneffei ATCC 18224] Length = 604 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 9/83 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAK---I 59 D FCG GG+ + + + + +I+ + +T++ NF ++ F D + Sbjct: 300 FGDAFCGAGGVSVGAWKA----GLRVKYGIDIDTAACETWRTNFVHSSCFHADFYSWLSL 355 Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82 + +D D+ + PCQPFS A Sbjct: 356 QDED-AQVDISHSSPPCQPFSPA 377 >gi|297807559|ref|XP_002871663.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297317500|gb|EFH47922.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 593 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 15/88 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55 +K+ LF GIGG + L + + S EI+ + ++ + T G D Sbjct: 467 IKVLSLFTGIGGGEVALHRL--QIRMNVVVSVEISEANRNILRSFWEQTNQKGILREFKD 524 Query: 56 IAKIKTQDIPD-------HDVLLAGFPC 76 + K+ I D+++ G PC Sbjct: 525 VEKLDDNTIEQLMDEYGGFDLVIGGSPC 552 >gi|319957554|ref|YP_004168817.1| c-5 cytosine-specific DNA methylase [Nitratifractor salsuginis DSM 16511] gi|319419958|gb|ADV47068.1| C-5 cytosine-specific DNA methylase [Nitratifractor salsuginis DSM 16511] Length = 338 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 6/63 (9%) Query: 27 VECFFSSEINPYSVKTY--QANFPN---TLIFGDIAKIKTQDIPDH-DVLLAGFPCQPFS 80 + EI Y+ + + + I+ D+ + DV+ GFPCQ S Sbjct: 22 WHTVCAVEIEEYAREVLLQRQRTGDLESFPIWDDVRSFDGKPWKGVVDVITGGFPCQDIS 81 Query: 81 QAG 83 AG Sbjct: 82 IAG 84 >gi|134295263|ref|YP_001118998.1| C-5 cytosine-specific DNA methylase [Burkholderia vietnamiensis G4] gi|134138420|gb|ABO54163.1| C-5 cytosine-specific DNA methylase [Burkholderia vietnamiensis G4] Length = 232 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 12/89 (13%) Query: 2 LKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY-----QANFPNTLIFG 54 +++ +LF G+GG L + E NPY ++ + + P I+ Sbjct: 1 MRVNELELFAGVGGGIL----AAKLLGHRTVCAVERNPYRIRRLMQRQNEGHLPPFPIWD 56 Query: 55 DIAKIKTQDIPD-HDVLLAGFPCQPFSQA 82 D+ D + GFPCQ +S A Sbjct: 57 DVRTFDGLPWRGIVDCVSGGFPCQAYSSA 85 >gi|315607602|ref|ZP_07882597.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] gi|315250785|gb|EFU30779.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] Length = 531 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 17/95 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVEC---FFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 DLFCG GG +E +C + ++ ++QAN P+TL F DI + Sbjct: 8 YIDLFCGAGGTSTGVEHA-KLDGTKCARVVACVNHDANAIASHQANHPDTLHFTEDIRTL 66 Query: 60 KTQDIPDH------------DVLLAGFPCQPFSQA 82 + H VL A C FS+A Sbjct: 67 DLTALTAHLNRMRMKYPSALVVLWASLECTNFSKA 101 >gi|228950284|ref|ZP_04112461.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228809446|gb|EEM55890.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 346 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 16/92 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 L + F GG + + +I+P V YQ N + DI + K Sbjct: 20 LNVFSCFA-CGG---GSTMGYKLAGCTVLGNCDIDPQMVALYQNNHKPRYSYCMDIREFK 75 Query: 61 TQDIPDH---------DVLLAGFPCQPFSQAG 83 DIP+ D+L PC FS AG Sbjct: 76 --DIPNAKLPAELFNLDILDGSPPCSSFSTAG 105 >gi|332288285|ref|YP_004419137.1| C-5 cytosine-specific DNA methylase [Gallibacterium anatis UMN179] gi|330431181|gb|AEC16240.1| C-5 cytosine-specific DNA methylase [Gallibacterium anatis UMN179] Length = 349 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 10/86 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M++ DLFCG GG+ L++ V+ +I ++ N + + D++ + Sbjct: 1 MIEAVDLFCGAGGLTAGLQKA----GVKVKAGYDIEEACRYPFEFNNNASFVNKDVSLVS 56 Query: 61 TQDI------PDHDVLLAGFPCQPFS 80 ++ +L PCQPFS Sbjct: 57 GTEVMQWYNQKAIRLLAGCAPCQPFS 82 >gi|303324183|ref|XP_003072079.1| C-5 cytosine methyltransferase DmtA, putative [Coccidioides posadasii C735 delta SOWgp] gi|240111789|gb|EER29934.1| C-5 cytosine methyltransferase DmtA, putative [Coccidioides posadasii C735 delta SOWgp] Length = 535 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 13/87 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 D FCG GG+ Q H + + P ++ TY+ NF + G+ ++ Sbjct: 271 YTFGDGFCGAGGVSRGALQAGLH----VRWGFDKCPKAMDTYRLNFRTAV--GETCEVVH 324 Query: 60 ----KTQDIPDHDVLLAGFPCQPFSQA 82 +T+DI D++ PCQ FS A Sbjct: 325 FLTNETKDI-MVDIMHFSPPCQTFSPA 350 >gi|115450235|ref|NP_001048718.1| Os03g0110800 [Oryza sativa Japonica Group] gi|108705795|gb|ABF93590.1| DNA cytosine methyltransferase Zmet3, putative, expressed [Oryza sativa Japonica Group] gi|113547189|dbj|BAF10632.1| Os03g0110800 [Oryza sativa Japonica Group] Length = 597 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + H ++ S E + + ++ + T + D+ Sbjct: 474 MNVLSLFSGIGGAEVALHRLGIH--MKTVISVEKSEVNRTILKSWWDQTQTGTLIEIADV 531 Query: 57 AKIKTQDIP-------DHDVLLAGFPC 76 + T+ I D+++ G PC Sbjct: 532 RHLTTERIETFIRRFGGFDLVIGGSPC 558 >gi|300787999|ref|YP_003768290.1| DNA (cytosine-5-)-methyltransferase [Amycolatopsis mediterranei U32] gi|299797513|gb|ADJ47888.1| DNA (cytosine-5-)-methyltransferase [Amycolatopsis mediterranei U32] Length = 541 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 4/76 (5%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDIPD 66 F G GG + R ++ NP ++ T+ NFP + GDIAK P Sbjct: 9 FAGFGGDTTGVLAVPGTRG--VLGAN-HNPDAIATHALNFPGMDHYEGDIAKADIGTFPR 65 Query: 67 HDVLLAGFPCQPFSQA 82 D A C P++ A Sbjct: 66 VDFFWASPSCPPWTDA 81 >gi|296084835|emb|CBI27717.3| unnamed protein product [Vitis vinifera] Length = 1417 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+Q+ ++ E + ++ N P + +F Sbjct: 987 LDIFAGCGGLSEGLQQSGVSV---TKWAIEYEEPAGDAFKLNHPESSMFINNCNVILRAV 1043 Query: 54 ----GD-------------IAKIKTQDIPD------HDVLLAGFPCQPFS 80 GD + +DI + D + G PCQ FS Sbjct: 1044 MEKCGDADDCLSTSEAAELATSLGEKDINNLPLPGQVDFINGGPPCQGFS 1093 >gi|108705796|gb|ABF93591.1| DNA cytosine methyltransferase Zmet3, putative, expressed [Oryza sativa Japonica Group] gi|283379278|dbj|BAI66065.1| DNA methyltransferase [Oryza sativa Japonica Group] Length = 598 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + H ++ S E + + ++ + T + D+ Sbjct: 475 MNVLSLFSGIGGAEVALHRLGIH--MKTVISVEKSEVNRTILKSWWDQTQTGTLIEIADV 532 Query: 57 AKIKTQDIP-------DHDVLLAGFPC 76 + T+ I D+++ G PC Sbjct: 533 RHLTTERIETFIRRFGGFDLVIGGSPC 559 >gi|182438469|ref|YP_001826188.1| putative 5-methylcytosine methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466985|dbj|BAG21505.1| putative 5-methylcytosine methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 317 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 8/78 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L+ D+ G GG+ L E+ E + + +T + N P ++ D+ Sbjct: 4 LRFVDVCAGAGGLALGFEKA----GFEPVLLLDKKRIACETLRMNRPTWNVLEADLLDFD 59 Query: 61 TQD---IPDHDVLLAGFP 75 + D D+L AG P Sbjct: 60 PAEHRQTYDVDLLSAGLP 77 >gi|167462144|ref|ZP_02327233.1| hypothetical protein Plarl_06240 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382466|ref|ZP_08056361.1| hypothetical protein PL1_2405 [Paenibacillus larvae subsp. larvae B-3650] gi|321153579|gb|EFX45968.1| hypothetical protein PL1_2405 [Paenibacillus larvae subsp. larvae B-3650] Length = 232 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 13/82 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI--K 60 K+ DLFC GG E +I P Q N+P I+ D +I Sbjct: 4 KLLDLFCKAGGCSAGYASA----GFEVIG-VDIEP------QPNYPYEFIWADAFEILKD 52 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 + I + DV+ A PCQ S+A Sbjct: 53 HELIDEFDVIHASPPCQAHSKA 74 >gi|168032180|ref|XP_001768597.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680096|gb|EDQ66535.1| predicted protein [Physcomitrella patens subsp. patens] Length = 383 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 16/93 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFG 54 +K+ LF GIGG + L + + S EI+ + + +A + + + Sbjct: 254 IKVLSLFSGIGGAEVALHKMGMK--LLVVVSVEIDDGTRRCLEAWWATSKQTGVLNQNYH 311 Query: 55 DIAKIKTQDIPD-------HDVLLAGFPCQPFS 80 +I + I + D+++ G PC S Sbjct: 312 NIKDLGRAQISELVNKYGGFDLIVGGTPCNNLS 344 >gi|298377907|ref|ZP_06987856.1| DNA (cytosine-5-)-methyltransferase [Bacteroides sp. 3_1_19] gi|298265151|gb|EFI06815.1| DNA (cytosine-5-)-methyltransferase [Bacteroides sp. 3_1_19] Length = 409 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 33/122 (27%), Gaps = 43/122 (35%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNT------- 50 DLF G GG+ + E V+T + + T Sbjct: 6 YTFIDLFAGCGGLSEGFMSSGYFSG---LAHVEWELPMVQTLRNRLVQKWNETEEDAKKK 62 Query: 51 LIFGDIAKIKT--------------------------QDI---PDHDVLLAGFPCQPFSQ 81 +I DI K ++I D ++ G PCQ +S Sbjct: 63 VILFDIQKTDELISGNWSEESIAQYGENNDNSIQKGLKEIINKESVDFIIGGPPCQAYSI 122 Query: 82 AG 83 G Sbjct: 123 HG 124 >gi|258570503|ref|XP_002544055.1| predicted protein [Uncinocarpus reesii 1704] gi|237904325|gb|EEP78726.1| predicted protein [Uncinocarpus reesii 1704] Length = 571 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 13/87 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 D FCG GG+ Q + + + ++ TY+ NF + G+ ++ Sbjct: 273 YTFGDGFCGAGGVSRGALQAGLY----VRWGFDKCHKAMDTYRLNFRTAV--GETCEVAH 326 Query: 60 ----KTQDIPDHDVLLAGFPCQPFSQA 82 +DI D+L PCQ FS A Sbjct: 327 FLTNDAKDI-MVDILHFSPPCQTFSSA 352 >gi|255072031|ref|XP_002499690.1| DNA methyltransferase [Micromonas sp. RCC299] gi|226514952|gb|ACO60948.1| DNA methyltransferase [Micromonas sp. RCC299] Length = 401 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 15/95 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPNT--------- 50 K+ + + G+G +R LE+ +V S + + + Y AN+P+ Sbjct: 60 KMVEFYAGMGTMRWSLERALESDMGASVTALASIDNSEVANAVYLANYPDENASGVLMRR 119 Query: 51 --LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + + + DV PCQP+++ G Sbjct: 120 NVEHLSSVETLDAR-FGGADVWTLSPPCQPYTRKG 153 >gi|225452416|ref|XP_002273972.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 603 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 15/88 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---DIAK 58 + + LF GIGG + L + ++ + EI+ + ++ + T G DIA Sbjct: 478 ITLLSLFSGIGGAEIALHRLG--IPLKNVVAVEISETNRNILRSWWEQTNQRGTLVDIAD 535 Query: 59 IK----------TQDIPDHDVLLAGFPC 76 ++ D+++ G PC Sbjct: 536 VQQLNGDRLEQLIHTFGGFDLIVGGSPC 563 >gi|328857943|gb|EGG07057.1| hypothetical protein MELLADRAFT_85954 [Melampsora larici-populina 98AG31] Length = 883 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 32/110 (29%) Query: 2 LKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK 58 +K+ +LF GIG L + F + + + +T NFP T+ D+ + Sbjct: 357 MKLSHLELFGGIGSFSLGFSEHGLTDQKRTVF-IDWSVPACETASINFPKSTIFCADVNE 415 Query: 59 IK-------------------------TQDIP---DHDVLLAGFPCQPFS 80 I +P D D++ AGFPC S Sbjct: 416 ILCLMITGKTRQGKSSVRDLRTGLQIFPDQLPKPGDFDIITAGFPCGSHS 465 >gi|299145766|ref|ZP_07038834.1| putative C-5 cytosine-specific DNA methylase [Bacteroides sp. 3_1_23] gi|298516257|gb|EFI40138.1| putative C-5 cytosine-specific DNA methylase [Bacteroides sp. 3_1_23] Length = 545 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 17/98 (17%) Query: 2 LK--ITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDI 56 +K DLFCG GG +E+ N + + + ++ ++ AN P+ L F DI Sbjct: 1 MKLLYIDLFCGAGGTSTGVEKARLENEQCAKVIACVNHDKNAIASHAANHPDALHFTEDI 60 Query: 57 AKIKTQ-----------DIPDH-DVLLAGFPCQPFSQA 82 + + P+ VL A C FS+A Sbjct: 61 RTLNLSPLVSHLQKCRAEYPEALIVLWASLECTNFSKA 98 >gi|301321463|gb|ADK70106.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 493 Score = 55.9 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 8/60 (13%) Query: 32 SSEINPYSVKTYQANFP-NTLIFGDIAK-------IKTQDIPDHDVLLAGFPCQPFSQAG 83 + + N +++T++ N P + +I GDI IK ++++ G PCQ FS G Sbjct: 3 AVDFNKSALETFKHNMPWSDIICGDITNESIRQEIIKRATKLKVNMIIGGPPCQGFSNKG 62 >gi|295646363|gb|ADG23067.1| DNA (cytosine-5)-methyltransferase 2 [Gadus morhua] Length = 139 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Query: 32 SSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDIPD--HDVLLAGFPCQPFSQAG 83 + ++N + + Y+ NFP+T ++ I I ++ D++L PCQPF++ G Sbjct: 2 AIDVNTTANEIYRHNFPDTPLWPKTIEGISLEEFNKLSFDMILMSPPCQPFTRIG 56 >gi|21226380|ref|NP_632302.1| DNA-cytosine methyltransferase [Methanosarcina mazei Go1] gi|20904635|gb|AAM29974.1| DNA-cytosine methyltransferase [Methanosarcina mazei Go1] Length = 423 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 43/132 (32%), Gaps = 54/132 (40%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANF------PNTLIF 53 + D+F G GG+ Q + + E N ++ + +A + N I+ Sbjct: 5 YTVLDMFSGAGGLTEGFFQ----QGFKFVSHIEKNCHARNSLETRAIYHSLKDSSNERIY 60 Query: 54 GD-----------IAKIKT----------------------QDIPDH---------DVLL 71 D I K K ++I +H DV++ Sbjct: 61 RDYISGNLNRDEFIHKFKELELTPAGLLQGEVTESNETTMIKEIKEHLKVIDSDSVDVVI 120 Query: 72 AGFPCQPFSQAG 83 G PCQ +S AG Sbjct: 121 GGPPCQAYSVAG 132 >gi|322505075|emb|CAM39116.2| modification methylase-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 843 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/33 (48%), Positives = 21/33 (63%) Query: 51 LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + G+I +I P HDVL GFPCQ F++AG Sbjct: 437 PLVGNITEIPNAFFPTHDVLTGGFPCQSFAKAG 469 Score = 49.4 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 4/47 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF 47 + ++LFCGIG R LE+ F+ + P + Y N Sbjct: 327 LFTFSELFCGIGMFRSGLERVGGRA----AFAVDFAPPAQIVYALNH 369 >gi|154338798|ref|XP_001565621.1| modification methylase-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 843 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/33 (48%), Positives = 21/33 (63%) Query: 51 LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + G+I +I P HDVL GFPCQ F++AG Sbjct: 437 PLVGNITEIPNAFFPTHDVLTGGFPCQSFAKAG 469 Score = 49.4 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 4/47 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF 47 + ++LFCGIG R LE+ F+ + P + Y N Sbjct: 327 LFTFSELFCGIGMFRSGLERVGGRA----AFAVDFAPPAQIVYALNH 369 >gi|108705797|gb|ABF93592.1| DNA cytosine methyltransferase Zmet3, putative, expressed [Oryza sativa Japonica Group] Length = 626 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + H ++ S E + + ++ + T + D+ Sbjct: 503 MNVLSLFSGIGGAEVALHRLGIH--MKTVISVEKSEVNRTILKSWWDQTQTGTLIEIADV 560 Query: 57 AKIKTQDIP-------DHDVLLAGFPC 76 + T+ I D+++ G PC Sbjct: 561 RHLTTERIETFIRRFGGFDLVIGGSPC 587 >gi|312199630|ref|YP_004019691.1| C-5 cytosine-specific DNA methylase [Frankia sp. EuI1c] gi|311230966|gb|ADP83821.1| C-5 cytosine-specific DNA methylase [Frankia sp. EuI1c] Length = 545 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 5/79 (6%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQD 63 DLFCG GG L ++ P +V+ + N P T DI+ + Sbjct: 9 LDLFCGAGGSSTGLVGAGVRVTH---AANHW-PLAVEVHGLNHPETEHDCADISGTDPRR 64 Query: 64 IPDHDVLLAGFPCQPFSQA 82 P D+L A C S A Sbjct: 65 YPSTDILWASPECTNQSVA 83 >gi|320037073|gb|EFW19011.1| hypothetical protein CPSG_04557 [Coccidioides posadasii str. Silveira] Length = 607 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 13/87 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59 D FCG GG+ Q H + + P ++ TY+ NF + G+ ++ Sbjct: 271 YTFGDGFCGAGGVSRGALQAGLH----VRWGFDKCPKAMDTYRLNFRTAV--GETCEVVH 324 Query: 60 ----KTQDIPDHDVLLAGFPCQPFSQA 82 +T+DI D++ PCQ FS A Sbjct: 325 FLTNETKDI-MVDIMHFSPPCQTFSPA 350 >gi|307149806|ref|YP_003890849.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] gi|306986606|gb|ADN18484.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822] Length = 645 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 11/82 (13%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-------VKTYQANFPNTLIFGDIAKI 59 LF G G + ++ + E +P S + Y+ N LI + + Sbjct: 24 LFSGGGLFDVGAMLA----GIKPVWGVEFDPNSPSLSSAIAECYEKNLGRHLIKKPVQDV 79 Query: 60 KTQDIPDHDVLLAGFPCQPFSQ 81 + D L PCQ FS Sbjct: 80 DFSSLVPPDFLHCSPPCQKFSL 101 >gi|265763529|ref|ZP_06092097.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 2_1_16] gi|263256137|gb|EEZ27483.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 2_1_16] Length = 545 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 17/98 (17%) Query: 2 LK--ITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDI 56 +K DLFCG GG +E+ N + + + ++ ++ AN P+ L F DI Sbjct: 1 MKLLYIDLFCGAGGTSTGVEKARLENEQCAKVIACVNHDKNAIASHAANHPDALHFTEDI 60 Query: 57 AKIKTQ-----------DIPDH-DVLLAGFPCQPFSQA 82 + + P+ VL A C FS+A Sbjct: 61 RTLNLSPLVSHLQKCRAEYPEALIVLWASLECTNFSKA 98 >gi|332358649|gb|EGJ36472.1| adenine/cytosine DNA methyltransferase [Streptococcus sanguinis SK355] Length = 387 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 26/101 (25%) Query: 2 LKITDLFC--GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNTLIFGD 55 + LF GIG F EC SSE+ ++ +AN + + I GD Sbjct: 1 MNYISLFSSSGIGC------YGFKEEGFECIASSELIERRLEVQKANNKLKYDDGYILGD 54 Query: 56 IA-KIKTQDI-------------PDHDVLLAGFPCQPFSQA 82 I +I Q++ + DV++ PCQ S A Sbjct: 55 ITDEIVKQNLFDAVENFKKRKKQEEVDVIIFTAPCQGMSVA 95 >gi|300782287|ref|YP_003762578.1| DNA (cytosine-5-)-methyltransferase [Amycolatopsis mediterranei U32] gi|299791801|gb|ADJ42176.1| DNA (cytosine-5-)-methyltransferase [Amycolatopsis mediterranei U32] Length = 541 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 4/76 (5%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDIPD 66 F G GG + ++ NP ++ T+ NFP + GDIAK P Sbjct: 9 FAGFGGDATGVLAVPGTHG--VLGAN-HNPDAIATHALNFPGMDHYEGDIAKADIGTFPR 65 Query: 67 HDVLLAGFPCQPFSQA 82 D A C P++ A Sbjct: 66 VDFFWASPSCPPWTDA 81 >gi|222624058|gb|EEE58190.1| hypothetical protein OsJ_09131 [Oryza sativa Japonica Group] Length = 918 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + H ++ S E + + ++ + T + D+ Sbjct: 552 MNVLSLFSGIGGAEVALHRLGIH--MKTVISVEKSEVNRTILKSWWDQTQTGTLIEIADV 609 Query: 57 AKIKTQDIP-------DHDVLLAGFPC 76 + T+ I D+++ G PC Sbjct: 610 RHLTTERIETFIRRFGGFDLVIGGSPC 636 >gi|210134249|ref|YP_002300688.1| type II R-M system methyltransferase [Helicobacter pylori P12] gi|210132217|gb|ACJ07208.1| type II R-M system methyltransferase [Helicobacter pylori P12] Length = 822 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 22/99 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNTLIFGDIA 57 L LF G G L EC ++EI + + N F + I GDI Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEILEKRLNIQRINRKCKFDESYISGDIK 62 Query: 58 KIKTQD-----IP---------DHDVLLAGFPCQPFSQA 82 K +T++ I D+++A PCQ S A Sbjct: 63 KPETKEKILKQIEFYSKKFGNDRVDLVVATPPCQGMSVA 101 >gi|299141669|ref|ZP_07034805.1| DNA cytosine methyltransferase [Prevotella oris C735] gi|298577005|gb|EFI48875.1| DNA cytosine methyltransferase [Prevotella oris C735] Length = 531 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 17/95 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVEC---FFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 DLFCG GG +E +C + ++ ++QAN P+TL F DI + Sbjct: 8 YIDLFCGAGGTSTGVEHA-KLDGTKCARVVACVNHDANAIASHQANHPDTLHFTEDIRTL 66 Query: 60 KTQDIPDH------------DVLLAGFPCQPFSQA 82 + H VL A C FS+A Sbjct: 67 DLTGLTAHLNRMRMKYPSALVVLWASLECTNFSKA 101 >gi|327356173|gb|EGE85030.1| cytosine-specific methyltransferase [Ajellomyces dermatitidis ATCC 18188] Length = 1233 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 20/96 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L+ ++F G G LE+ +N ++ E + + TY+AN N L G + Sbjct: 658 LRALNIFSGGGSFDRGLEEGGAIKNR---WAVEWSAAPMLTYRANHENPEKVKLFLGSVN 714 Query: 58 KIKTQ-------------DIPDHDVLLAGFPCQPFS 80 Q + D +V+ AG PCQ +S Sbjct: 715 DFLLQALQQKAEAGNLIAKLGDVEVISAGSPCQGYS 750 >gi|261203805|ref|XP_002629116.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis SLH14081] gi|239586901|gb|EEQ69544.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis SLH14081] gi|239608866|gb|EEQ85853.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis ER-3] Length = 1233 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 20/96 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L+ ++F G G LE+ +N ++ E + + TY+AN N L G + Sbjct: 658 LRALNIFSGGGSFDRGLEEGGAIKNR---WAVEWSAAPMLTYRANHENPEKVKLFLGSVN 714 Query: 58 KIKTQ-------------DIPDHDVLLAGFPCQPFS 80 Q + D +V+ AG PCQ +S Sbjct: 715 DFLLQALQQKAEAGNLIAKLGDVEVISAGSPCQGYS 750 >gi|304389119|ref|ZP_07371161.1| adenine/cytosine DNA methyltransferase [Neisseria meningitidis ATCC 13091] gi|304336918|gb|EFM03110.1| adenine/cytosine DNA methyltransferase [Neisseria meningitidis ATCC 13091] Length = 499 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 27/98 (27%) Query: 3 KITDLF--CGIGGIRLDLEQTFNHRNVECFFSSE-------INPYSVKTYQANFPNTLIF 53 LF G+G F EC ++E I Y+ K F + I Sbjct: 41 TYISLFSSAGVGC------YGFKTNGFECVATNELLEKRLKIQKYNQKC---RFDSGYIA 91 Query: 54 GDIAKIKTQ-----DIP----DHDVLLAGFPCQPFSQA 82 GDI +TQ +I + DV++A PCQ S A Sbjct: 92 GDITLPETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 129 >gi|300728104|ref|ZP_07061476.1| C-5 cytosine-specific DNA methylase [Prevotella bryantii B14] gi|299774618|gb|EFI71238.1| C-5 cytosine-specific DNA methylase [Prevotella bryantii B14] Length = 382 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 17/90 (18%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQD 63 LF +G +E+ + V ++E++ + Y+ PNT +I GDI K + Sbjct: 10 LSLFSNVGVAEAGIEK---NNQVSIVLANELDHKRCEFYKCVHPNTKVIEGDITK---DE 63 Query: 64 IPD----------HDVLLAGFPCQPFSQAG 83 I D + +LA PCQ S+AG Sbjct: 64 IRDTIVEEAKSLNVNFVLATPPCQGMSEAG 93 >gi|330932388|ref|XP_003303757.1| hypothetical protein PTT_16100 [Pyrenophora teres f. teres 0-1] gi|311320036|gb|EFQ88154.1| hypothetical protein PTT_16100 [Pyrenophora teres f. teres 0-1] Length = 762 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 9/84 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 D+FCG GG Q + + + ++KTY+ N P F D ++ Sbjct: 314 FGDVFCGAGGASQGALQAGYAIG----WGLDSDHTALKTYKLNHPTAQTFKMDAHDFSSK 369 Query: 63 DI----PDHDVLLAGFPCQPFSQA 82 D+ DVL PC +S A Sbjct: 370 DVCPKRWRVDVLHLSPPCCYWSPA 393 >gi|224077654|ref|XP_002305346.1| DNA methyltransferase [Populus trichocarpa] gi|222848310|gb|EEE85857.1| DNA methyltransferase [Populus trichocarpa] Length = 1529 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+Q ++ E + + ++ N +L+F Sbjct: 1095 LDIFAGCGGLSEGLQQAGVSS---TKWAIEYEEPAGEAFKLNHAGSLMFINNCNVILRAV 1151 Query: 54 ----GD----IAK--------------IKTQDIP-DHDVLLAGFPCQPFS 80 GD I+ I +P D + G PCQ FS Sbjct: 1152 MEKCGDADDCISTSEAGELASSLDAKVIDGLPLPGQVDFINGGPPCQGFS 1201 >gi|290957787|ref|YP_003488969.1| restriction/modification system DNA methylase [Streptomyces scabiei 87.22] gi|260647313|emb|CBG70418.1| putative restriction/modification system DNA methylase [Streptomyces scabiei 87.22] Length = 424 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 7/83 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + I DLF G GG + + V E + ++ KT +A I D+A Sbjct: 1 MTILDLFAGPGGWS----HSLHVLGVRDVGL-EWDEWACKT-RAAAGQLTIRTDVALYPV 54 Query: 62 QDIPDHDV-LLAGFPCQPFSQAG 83 V L+A PCQ +S AG Sbjct: 55 WPFLGKTVGLIASPPCQAWSMAG 77 >gi|194706928|gb|ACF87548.1| unknown [Zea mays] Length = 334 Score = 55.5 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP--DHDVLLAGFPCQPFSQAG 83 E + +IN + Y+ NF + G+I + D+ L PCQP+++ G Sbjct: 8 EVVEAFDINDVANDVYEHNFGHRPCQGNIQTLTASDLDKYKAHAWLLSPPCQPYTRQG 65 >gi|284030140|ref|YP_003380071.1| C-5 cytosine-specific DNA methylase [Kribbella flavida DSM 17836] gi|283809433|gb|ADB31272.1| C-5 cytosine-specific DNA methylase [Kribbella flavida DSM 17836] Length = 514 Score = 55.5 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 L +TDLFCG GG Q V ++ +V+T+ +N P T D+++++ Sbjct: 3 LTMTDLFCGAGGSSTGAVQV---PGVTVKLAANHWKLAVETHNSNHPGTDHDCADLSQVE 59 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 + P +VL A C SQA Sbjct: 60 PRRYPRTNVLWASPECTNHSQA 81 >gi|302419495|ref|XP_003007578.1| RIP defective [Verticillium albo-atrum VaMs.102] gi|261353229|gb|EEY15657.1| RIP defective [Verticillium albo-atrum VaMs.102] Length = 909 Score = 55.5 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 12/87 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFG-DI--- 56 + D FCG GG+ E++ H ++ + + + + + NFP+T +F DI Sbjct: 319 YTLFDAFCGAGGVSRGAERSGLH----VRYAVDVWDK-ACSSMRMNFPDTEVFETDIYGF 373 Query: 57 -AKIKTQDIPDHDVLLAGFPCQPFSQA 82 + I DV+ PCQ +S A Sbjct: 374 VTSTDGRVI-TADVVHLSPPCQFWSPA 399 >gi|297570127|ref|YP_003691471.1| DNA-cytosine methyltransferase [Desulfurivibrio alkaliphilus AHT2] gi|296926042|gb|ADH86852.1| DNA-cytosine methyltransferase [Desulfurivibrio alkaliphilus AHT2] Length = 363 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 10/83 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLFCG+G + L ++ +++ ++ N + D+ K+ + Sbjct: 19 VVDLFCGVGALSHGLRNA----GLKILAGYDVDARCKYAFETNNSASFFSRDVGKLTAAE 74 Query: 64 IPDH------DVLLAGFPCQPFS 80 + H VL PCQPFS Sbjct: 75 LKSHFSGNVPSVLAGCAPCQPFS 97 >gi|254825325|ref|ZP_05230326.1| deoxycytosine methylase [Listeria monocytogenes FSL J1-194] gi|255521307|ref|ZP_05388544.1| modification methylase, putative [Listeria monocytogenes FSL J1-175] gi|293594568|gb|EFG02329.1| deoxycytosine methylase [Listeria monocytogenes FSL J1-194] Length = 385 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 39/133 (29%), Gaps = 54/133 (40%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY---QAN----------- 46 MLK+ + F GIG + LE+ + E + E + ++ Y N Sbjct: 1 MLKVVEAFSGIGAQKQALEKL--NIEHEIISTIEWDINAIYAYDIMHHNDNAPSDLSKSE 58 Query: 47 -----------------FPNT--------------------LIFGDIAKIKTQDIP-DHD 68 F N DI ++ IP D D Sbjct: 59 ILERLSNVTLSPDGKKPFSNHGFQRLKEEKLQKLYAAINRNRNLCDITQVTGDMIPGDTD 118 Query: 69 VLLAGFPCQPFSQ 81 +L FPCQ S Sbjct: 119 LLTYSFPCQDLSV 131 >gi|317011903|gb|ADU82511.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori Lithuania75] Length = 544 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 22/99 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNTLIFGDIA 57 L LF G G L EC ++EI + + N F + I GDI Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEILEKRLNIQRINRKCKFDESYISGDIK 62 Query: 58 KIKTQD-IPD-------------HDVLLAGFPCQPFSQA 82 K +T++ I D+++A PCQ S A Sbjct: 63 KPETKEKILKQIGFYSKKFGNDRVDLVVATPPCQGMSVA 101 >gi|167887556|gb|ACA05980.1| tRNA aspartic acid methyltransferase 1 variant 6 [Homo sapiens] Length = 71 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 5/62 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---DIAK 58 L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + +I K Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEITK 61 Query: 59 IK 60 I Sbjct: 62 IT 63 >gi|148977150|ref|ZP_01813790.1| adenine/cytosine DNA methyltransferase [Vibrionales bacterium SWAT-3] gi|145963619|gb|EDK28881.1| adenine/cytosine DNA methyltransferase [Vibrionales bacterium SWAT-3] Length = 820 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 34/106 (32%) Query: 1 MLKITDLF--CGIGGIRLDLEQTFNHRNVECFFSSE-------INPYSVKT-YQANFPNT 50 M+ LF GIG L +C ++E I Y+ K Y++ + Sbjct: 1 MITYISLFSSAGIGCFGL------KELGFKCIATAELLEKRLNIQKYNNKCEYESGY--- 51 Query: 51 LIFGDIAKIKTQD--------------IPDHDVLLAGFPCQPFSQA 82 I GD+ + +T D + D D+++A PCQ S A Sbjct: 52 -ICGDLTQKETHDTLYGEIDAYKQRKNLKDIDLVVATPPCQGMSVA 96 >gi|239931045|ref|ZP_04687998.1| putative 5-methylcytosine methyltransferase [Streptomyces ghanaensis ATCC 14672] Length = 483 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 22/64 (34%), Gaps = 2/64 (3%) Query: 20 QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPF 79 + + E + + T +A GD+ P VL G PCQ F Sbjct: 1 MAADVLGYQVTG-IEWDDDACATREA-AGMDTFHGDVRNYSASLFPHAQVLTGGPPCQTF 58 Query: 80 SQAG 83 + AG Sbjct: 59 TVAG 62 >gi|317506927|ref|ZP_07964699.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] gi|316254855|gb|EFV14153.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC BAA-974] Length = 399 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 9/61 (14%) Query: 32 SSEINPYSVKTYQAN----FPNT----LIFGDIAKIKTQDIPD-HDVLLAGFPCQPFSQA 82 + E + ++ T +AN P ++ D+ D D++ G PCQPFS Sbjct: 29 AVERDRWACDTLRANAAAGHPLVRGLRVLCDDVRSADWSGFEDGVDLVAGGPPCQPFSLG 88 Query: 83 G 83 G Sbjct: 89 G 89 >gi|67514587|ref|NP_001019999.1| DNA (cytosine-5)-methyltransferase 3B [Gallus gallus] gi|66766326|dbj|BAD99024.1| DNA methyltransferase 3B [Gallus gallus] Length = 851 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 6/85 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI--NPYSVKTYQA--NFPNTLIFGDIA 57 +++ LF GI L L+ VE + +SEI +P +V T + N +I Sbjct: 569 IRVLSLFDGIATGYLVLKDLG--IQVEKYIASEICEDPLAVGTVRHEGNITYVHDVRNIT 626 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82 K ++ D+++ G PC S A Sbjct: 627 KRNIEEWGPFDLVIGGSPCNDLSLA 651 >gi|323942311|gb|EGB38482.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli E482] Length = 94 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 5/66 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +K+ D F G GG Q ++ F + + + +++ANFP I DI I Sbjct: 12 IKVFDFFSGCGGTSQGFHQA----GMDIVFGLDFDVDAASSFRANFPQAAFINSDIRLID 67 Query: 61 TQDIPD 66 I Sbjct: 68 NNAINK 73 >gi|147919344|ref|YP_686920.1| C-5 cytosine-specific DNA methyltransferase [uncultured methanogenic archaeon RC-I] gi|110622316|emb|CAJ37594.1| C-5 cytosine-specific DNA methyltransferase [uncultured methanogenic archaeon RC-I] Length = 419 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 39/132 (29%), Gaps = 54/132 (40%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--------------- 46 + DLF G GG+ + + E + ++ KT Q Sbjct: 5 YTVLDLFSGAGGLTEGFYR----NGFDIISHIEKDEFASKTLQTRSLYYALLKINKVHIY 60 Query: 47 ----------------------------FPN-TLIFGD--IAKIKTQ----DIPDHDVLL 71 +LI D I KI TQ +I +V++ Sbjct: 61 YNYYNNRINRDEFLKQCCELGIDNSEVIHEEISLITEDSLIDKINTQLIKRNINKINVVI 120 Query: 72 AGFPCQPFSQAG 83 G PCQ +S G Sbjct: 121 GGPPCQAYSLIG 132 >gi|24431594|gb|AAN61474.1| Putative DNA cytosine methyltransferase Zmet3 [Oryza sativa Japonica Group] Length = 881 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + H ++ S E + + ++ + T + D+ Sbjct: 680 MNVLSLFSGIGGAEVALHRLGIH--MKTVISVEKSEVNRTILKSWWDQTQTGTLIEIADV 737 Query: 57 AKIKTQDIP-------DHDVLLAGFPC 76 + T+ I D+++ G PC Sbjct: 738 RHLTTERIETFIRRFGGFDLVIGGSPC 764 >gi|15676623|ref|NP_273767.1| modification methylase HgaI-1 [Neisseria meningitidis MC58] gi|5578896|emb|CAB51245.1| m5C-methyltransferase [Neisseria meningitidis] gi|7225952|gb|AAF41138.1| modification methylase HgaI-1 [Neisseria meningitidis MC58] gi|308388915|gb|ADO31235.1| modification methylase HgaI-1 [Neisseria meningitidis alpha710] gi|316983707|gb|EFV62688.1| modification methylase HgaIA [Neisseria meningitidis H44/76] gi|325133760|gb|EGC56416.1| DNA-cytosine methyltransferase [Neisseria meningitidis M13399] gi|325140119|gb|EGC62648.1| DNA-cytosine methyltransferase [Neisseria meningitidis CU385] gi|325144071|gb|EGC66379.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240013] gi|325200590|gb|ADY96045.1| DNA-cytosine methyltransferase [Neisseria meningitidis H44/76] gi|325206432|gb|ADZ01885.1| DNA-cytosine methyltransferase [Neisseria meningitidis M04-240196] gi|325207770|gb|ADZ03222.1| DNA-cytosine methyltransferase [Neisseria meningitidis NZ-05/33] Length = 352 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 15/92 (16%) Query: 1 MLKITDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIA 57 M+ LF GI E ++ ++ ++E+ P Y+A +P +I GDI Sbjct: 1 MMIGASLFSSAGI------AETYLHNAGIKIIAANELVPERANLYKALYPESKMIIGDIL 54 Query: 58 KIK-----TQDIPDH-DVLLAGFPCQPFSQAG 83 + Q +P+ D L+A PCQ S AG Sbjct: 55 HEEVFQNLIQSVPNRLDFLIASPPCQGMSVAG 86 >gi|289620954|emb|CBI52688.1| unnamed protein product [Sordaria macrospora] Length = 1536 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 18/95 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 LK DL+CG G LE+ VE ++++I ++ TY AN P+ G + Sbjct: 858 LKGMDLYCGGGNFGRGLEEGGV---VEMRWANDIWDKAIHTYMANTPDPEKTNPFLGSVD 914 Query: 58 KIK--------TQDIP---DHDVLLAGFPCQPFSQ 81 + + ++P + D + AG PC FS Sbjct: 915 DLLRLALEGKFSDNVPRPGEVDFIAAGSPCPGFSL 949 >gi|164510148|emb|CAJ40945.1| putative DNA cytosine methyltransferase [Sordaria macrospora] Length = 1536 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 18/95 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 LK DL+CG G LE+ VE ++++I ++ TY AN P+ G + Sbjct: 858 LKGMDLYCGGGNFGRGLEEGGV---VEMRWANDIWDKAIHTYMANTPDPEKTNPFLGSVD 914 Query: 58 KIK--------TQDIP---DHDVLLAGFPCQPFSQ 81 + + ++P + D + AG PC FS Sbjct: 915 DLLRLALEGKFSDNVPRPGEVDFIAAGSPCPGFSL 949 >gi|20531193|gb|AAM27410.1|AF500229_1 RIP defective [Neurospora tetrasperma] Length = 820 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 11/87 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDI--- 56 D F G GG + H C + ++V + ANF +T I+ DI Sbjct: 281 YTAGDTFAGAGGASRGITDAGVHLEF-CV---DNWEHAVASLNANFQGQDTTIY-DIDMH 335 Query: 57 AKIKTQDIPD-HDVLLAGFPCQPFSQA 82 I ++I D+L PCQ +S A Sbjct: 336 NFIVDKEIRHRVDILHLSPPCQVWSPA 362 >gi|38505643|ref|NP_942264.1| hypothetical protein ssl5108 [Synechocystis sp. PCC 6803] gi|38423667|dbj|BAD01878.1| unknown protein [Synechocystis sp. PCC 6803] Length = 75 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP 48 LK DLF G GG L EQT ++ EI+P Q ++P Sbjct: 9 LKHLDLFAGCGGFTLAAEQTGGK--IQTTQFVEIDPDCHAILQHHWP 53 >gi|168070728|ref|XP_001786917.1| predicted protein [Physcomitrella patens subsp. patens] gi|162660176|gb|EDQ48269.1| predicted protein [Physcomitrella patens subsp. patens] Length = 290 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 6/80 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 I +LF GIG R L + EI+ +V++Y A + + + Sbjct: 134 ILELFGGIGAPRKALINLGVEH--KAIDYVEIDEKAVRSYNAMYDRLHKPQSVVGWNLR- 190 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 D+L G PCQ +S++G Sbjct: 191 ---PDILCHGSPCQDYSRSG 207 >gi|57506140|ref|ZP_00372061.1| adenine/cytosine DNA methyltransferase [Campylobacter upsaliensis RM3195] gi|57015535|gb|EAL52328.1| adenine/cytosine DNA methyltransferase [Campylobacter upsaliensis RM3195] Length = 817 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 36/100 (36%), Gaps = 25/100 (25%) Query: 2 LKITDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGD 55 L LF G+G F EC ++E+ +K + N N I GD Sbjct: 7 LTYISLFSSAGVGC------YGFKEAGFECIATNELLEKRLKIQKLNHKCKYENGYILGD 60 Query: 56 IAK--IKTQDIP-----------DHDVLLAGFPCQPFSQA 82 I K IK Q DVL+A PCQ S A Sbjct: 61 IKKQEIKNQIFNQIDLYKRLGNDKIDVLIATPPCQGMSVA 100 >gi|300861667|ref|ZP_07107751.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TUSoD Ef11] gi|300849128|gb|EFK76881.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TUSoD Ef11] Length = 385 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 54/133 (40%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY---QAN----------- 46 MLK+ + F GIG + LE+ + E + E + ++ Y N Sbjct: 1 MLKVVEAFSGIGAQKQALEKL--NIEHEIINTIEWDINAIYAYDIMHHNDNSPSKLSKHE 58 Query: 47 -----------------FPNTLIFG--------------------DIAKIKTQDIPD-HD 68 F + ++ DI ++ IPD D Sbjct: 59 IIERLANVTLSPDGKKPFSDNGLYRIKEEKLQKLYAAIRRNNNLCDITQVSGDMIPDDTD 118 Query: 69 VLLAGFPCQPFSQ 81 +L FPCQ S Sbjct: 119 LLTYSFPCQDLSI 131 >gi|229547357|ref|ZP_04436082.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX1322] gi|256854885|ref|ZP_05560249.1| predicted protein [Enterococcus faecalis T8] gi|307292237|ref|ZP_07572101.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0411] gi|229307506|gb|EEN73493.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX1322] gi|256710445|gb|EEU25489.1| predicted protein [Enterococcus faecalis T8] gi|306496743|gb|EFM66296.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0411] gi|315028686|gb|EFT40618.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX4000] Length = 391 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 54/133 (40%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY---QAN----------- 46 MLK+ + F GIG + LE+ + E + E + ++ Y N Sbjct: 7 MLKVVEAFSGIGAQKQALEKL--NIEHEIINTIEWDINAIYAYDIMHHNDNSPSKLSKHE 64 Query: 47 -----------------FPNTLIFG--------------------DIAKIKTQDIPD-HD 68 F + ++ DI ++ IPD D Sbjct: 65 IIERLANVTLSPDGKKPFSDNGLYRIKEEKLQKLYAAIRRNNNLCDITQVSGDMIPDDTD 124 Query: 69 VLLAGFPCQPFSQ 81 +L FPCQ S Sbjct: 125 LLTYSFPCQDLSI 137 >gi|167754389|ref|ZP_02426516.1| hypothetical protein ALIPUT_02683 [Alistipes putredinis DSM 17216] gi|167659014|gb|EDS03144.1| hypothetical protein ALIPUT_02683 [Alistipes putredinis DSM 17216] Length = 495 Score = 55.2 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 19/99 (19%) Query: 2 LK--ITDLFCGIGGIRLDLEQTFNHRNVEC---FFSSEINPYSVKTYQANFPNTLIF-GD 55 +K DLFCG GG +E H +C + ++ ++ AN P+ L F D Sbjct: 1 MKLLYIDLFCGAGGTSTGVENA-RHDGRQCAKVIGCVNHDANAIASHAANHPDALHFTED 59 Query: 56 IAKIKTQDI-----------PD-HDVLLAGFPCQPFSQA 82 I ++ + PD VL A C FS+A Sbjct: 60 IRTLELSPLTAHIAEMRRQYPDAFVVLWASLECTNFSKA 98 >gi|306829493|ref|ZP_07462683.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis ATCC 6249] gi|304428579|gb|EFM31669.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis ATCC 6249] Length = 450 Score = 54.8 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 12/90 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAK-- 58 + LF G E F + ++E+ P V+ Y+ +PN +F GD+ Sbjct: 69 FRGISLFASAG----VAETYFEKHGIHVKVAAELLPERVRIYKHLYPNVNVFQGDLTDKE 124 Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83 IK D L+A PCQ S AG Sbjct: 125 VYDEVIKAAIDEKCDFLIATPPCQGMSTAG 154 >gi|295666203|ref|XP_002793652.1| C-5 cytosine methyltransferase DmtA [Paracoccidioides brasiliensis Pb01] gi|226277946|gb|EEH33512.1| C-5 cytosine methyltransferase DmtA [Paracoccidioides brasiliensis Pb01] Length = 653 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI- 59 + D FCG GG+ Q N + + + ++ +Y+ NF + + D+A Sbjct: 327 YTLGDGFCGAGGVSRGALQAGLRLN----WGFDHSVAAMNSYRLNFETAIGYTSDVADFL 382 Query: 60 --KTQDIPDHDVLLAGFPCQPFSQA 82 T +I D+L PCQ FS A Sbjct: 383 ANNTDEI-IIDILHFSPPCQTFSPA 406 >gi|302343998|ref|YP_003808527.1| DNA-cytosine methyltransferase [Desulfarculus baarsii DSM 2075] gi|301640611|gb|ADK85933.1| DNA-cytosine methyltransferase [Desulfarculus baarsii DSM 2075] Length = 371 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG GG+ L + V+ +I+P Y AN + + +++ ++ Sbjct: 20 VDLFCGAGGLTHGLVKA----GVDVRLGVDIDPACEHPYVANNNARFLLKSVEELEASEL 75 Query: 65 PDH------DVLLAGFPCQPFS 80 H +L PCQ FS Sbjct: 76 ERHYRKNGIKLLAGCAPCQTFS 97 >gi|116751262|ref|YP_847949.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB] gi|116700326|gb|ABK19514.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB] Length = 371 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG GG+ L + V+ +I+P Y AN + + +++ ++ Sbjct: 20 VDLFCGAGGLTHGLVKA----GVDVRLGVDIDPACEHPYVANNNARFLLKSVEELEASEL 75 Query: 65 PDH------DVLLAGFPCQPFS 80 H +L PCQ FS Sbjct: 76 ERHYRKNGIKLLAGCAPCQTFS 97 >gi|297842789|ref|XP_002889276.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp. lyrata] gi|297335117|gb|EFH65535.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp. lyrata] Length = 876 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G G + + V+ +S +IN ++ +++ N P T + Sbjct: 221 LLDLYSGCGAMSTGFCMGASIAGVKLITKWSVDINKFACDSFRHNHPETEVRN 273 >gi|2766715|gb|AAB95486.1| chromomethylase [Arabidopsis arenosa] gi|2865435|gb|AAC02671.1| chromomethylase [Arabidopsis arenosa] Length = 744 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G G + + V+ +S +IN ++ +++ N P T + Sbjct: 211 LLDLYSGCGAMSTGFCMGASIAGVKLITKWSVDINKFACDSFRHNHPETEVRN 263 >gi|325131565|gb|EGC54272.1| adenine/cytosine DNA methyltransferase [Neisseria meningitidis M6190] Length = 877 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 27/98 (27%) Query: 3 KITDLF--CGIGGIRLDLEQTFNHRNVECFFSSE-------INPYSVKTYQANFPNTLIF 53 LF G+G F EC ++E I Y+ K F + I Sbjct: 56 TYISLFSSAGVGC------YGFKTNGFECVATNELLEKRLKIQKYNQKC---RFDSGYIA 106 Query: 54 GDIAKIKTQ-----DIP----DHDVLLAGFPCQPFSQA 82 GDI +TQ +I + DV++A PCQ S A Sbjct: 107 GDITLPETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 144 >gi|257438608|ref|ZP_05614363.1| modification methylase NgoMIV [Faecalibacterium prausnitzii A2-165] gi|257198937|gb|EEU97221.1| modification methylase NgoMIV [Faecalibacterium prausnitzii A2-165] Length = 293 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 21/60 (35%), Gaps = 1/60 (1%) Query: 25 RNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 E +AN P +I D+ K D+L G PC PFS AG Sbjct: 2 AGFVHVALVEYEQEYCNVLKANRPEWNVICADVHKFDGHPYEGVDLLAGGVPCPPFSVAG 61 >gi|254672007|emb|CBA04511.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis alpha275] gi|261391820|emb|CAX49276.1| putative modification methylase (cytosine-specific methyltransferase) [Neisseria meningitidis 8013] Length = 862 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 27/98 (27%) Query: 3 KITDLF--CGIGGIRLDLEQTFNHRNVECFFSSE-------INPYSVKTYQANFPNTLIF 53 LF G+G F EC ++E I Y+ K F + I Sbjct: 41 TYISLFSSAGVGC------YGFKTNGFECVATNELLEKRLKIQKYNQKC---RFDSGYIA 91 Query: 54 GDIAKIKTQ-----DIP----DHDVLLAGFPCQPFSQA 82 GDI +TQ +I + DV++A PCQ S A Sbjct: 92 GDITLPETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 129 >gi|325143130|gb|EGC65477.1| Modification methylase HgaIA [Neisseria meningitidis 961-5945] Length = 862 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 27/98 (27%) Query: 3 KITDLF--CGIGGIRLDLEQTFNHRNVECFFSSE-------INPYSVKTYQANFPNTLIF 53 LF G+G F EC ++E I Y+ K F + I Sbjct: 41 TYISLFSSAGVGC------YGFKTNGFECVATNELLEKRLKIQKYNQKC---RFDSGYIA 91 Query: 54 GDIAKIKTQ-----DIP----DHDVLLAGFPCQPFSQA 82 GDI +TQ +I + DV++A PCQ S A Sbjct: 92 GDITLPETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 129 >gi|297804242|ref|XP_002870005.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata] gi|297315841|gb|EFH46264.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata] Length = 1253 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGD 55 + DL+ G GG+ L V+ ++ + N + ++ + N PNT + D Sbjct: 687 VLDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNMAACESLKLNHPNTQVRND 740 >gi|325197576|gb|ADY93032.1| Modification methylase HgaIA [Neisseria meningitidis G2136] Length = 862 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 27/98 (27%) Query: 3 KITDLF--CGIGGIRLDLEQTFNHRNVECFFSSE-------INPYSVKTYQANFPNTLIF 53 LF G+G F EC ++E I Y+ K F + I Sbjct: 41 TYISLFSSAGVGC------YGFKTNGFECVATNELLEKRLKIQKYNQKC---RFDSGYIA 91 Query: 54 GDIAKIKTQ-----DIP----DHDVLLAGFPCQPFSQA 82 GDI +TQ +I + DV++A PCQ S A Sbjct: 92 GDITLPETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 129 >gi|206579328|ref|YP_002239202.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae 342] gi|206568386|gb|ACI10162.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae 342] Length = 347 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 11/83 (13%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQD 63 D+FCG GG+ L + + +I+ + N NT + + ++ + + Sbjct: 6 VDIFCGAGGLTYGLRTAGINVSHGI----DIDESCRYVIEKNNENTEFVHRSVTELSSDE 61 Query: 64 IP------DHDVLLAGFPCQPFS 80 + + +L PCQPFS Sbjct: 62 VSSMFQTGNVKLLAGCAPCQPFS 84 >gi|121634167|ref|YP_974412.1| putative DNA methylase [Neisseria meningitidis FAM18] gi|120865873|emb|CAM09607.1| putative DNA methylase [Neisseria meningitidis FAM18] gi|325139180|gb|EGC61726.1| Modification methylase HgaIA [Neisseria meningitidis ES14902] Length = 862 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 27/98 (27%) Query: 3 KITDLF--CGIGGIRLDLEQTFNHRNVECFFSSE-------INPYSVKTYQANFPNTLIF 53 LF G+G F EC ++E I Y+ K F + I Sbjct: 41 TYISLFSSAGVGC------YGFKTNGFECVATNELLEKRLKIQKYNQKC---RFDSGYIA 91 Query: 54 GDIAKIKTQ-----DIP----DHDVLLAGFPCQPFSQA 82 GDI +TQ +I + DV++A PCQ S A Sbjct: 92 GDITLPETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 129 >gi|11877311|emb|CAC19024.1| putative adenine/cytosine DNA methyltransferase [Neisseria meningitidis] Length = 862 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 27/98 (27%) Query: 3 KITDLF--CGIGGIRLDLEQTFNHRNVECFFSSE-------INPYSVKTYQANFPNTLIF 53 LF G+G F EC ++E I Y+ K F + I Sbjct: 41 TYISLFSSAGVGC------YGFKTNGFECVATNELLEKRLKIQKYNQKC---RFDSGYIA 91 Query: 54 GDIAKIKTQ-----DIP----DHDVLLAGFPCQPFSQA 82 GDI +TQ +I + DV++A PCQ S A Sbjct: 92 GDITLPETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 129 >gi|309379751|emb|CBX21527.1| putative DNA cytosine methyltransferase [Neisseria lactamica Y92-1009] Length = 612 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 27/98 (27%) Query: 3 KITDLF--CGIGGIRLDLEQTFNHRNVECFFSSE-------INPYSVKTYQANFPNTLIF 53 LF G+G F EC ++E I Y+ K F + I Sbjct: 41 TYISLFSSAGVGC------YGFKTNGFECVATNELLEKRLKIQKYNQKC---RFDSGYIA 91 Query: 54 GDIAKIKTQ-----DIP----DHDVLLAGFPCQPFSQA 82 GDI +TQ +I + DV++A PCQ S A Sbjct: 92 GDITLPETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 129 >gi|317497298|ref|ZP_07955621.1| C-5 cytosine-specific DNA methylase [Lachnospiraceae bacterium 5_1_63FAA] gi|316895367|gb|EFV17526.1| C-5 cytosine-specific DNA methylase [Lachnospiraceae bacterium 5_1_63FAA] Length = 363 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 40/140 (28%), Gaps = 60/140 (42%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE----------------------INPY 38 MLK+ + F G G R+ L + SE I+ Y Sbjct: 1 MLKVFEAFAGYGSQRMALRNVG--IEFKVVGISEIEGDVIKSYAAIHSDFLEKREYIDDY 58 Query: 39 ---------------------------SVK--------TYQANFPNTLIFGDIAKIKTQD 63 + K Y AN +GDI +I Sbjct: 59 VPADKEEMITFLEKINVPLDYKTFENKARKLKLPNLKDMYLAN-KLINNYGDIQRINPAS 117 Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P+ D+ FPCQ S AG Sbjct: 118 LPEFDLFTYSFPCQDISVAG 137 >gi|313113254|ref|ZP_07798867.1| hypothetical protein HMPREF9436_00712 [Faecalibacterium cf. prausnitzii KLE1255] gi|310624427|gb|EFQ07769.1| hypothetical protein HMPREF9436_00712 [Faecalibacterium cf. prausnitzii KLE1255] Length = 66 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 21/63 (33%), Gaps = 4/63 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L LF GIGGI L E E + +++P F DI + Sbjct: 3 LTHFSLFSGIGGIDLAAEAA----GFTSVCQCEWAAFPAAVLASHWPEVSRFQDITTVTK 58 Query: 62 QDI 64 + Sbjct: 59 EAF 61 >gi|167462173|ref|ZP_02327262.1| hypothetical protein Plarl_06385 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 232 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 13/82 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI--K 60 K+ DLFC GG E +I P Q N+P I+ D ++ Sbjct: 4 KLLDLFCKAGGCSAGYASA----GFEVIG-VDIEP------QPNYPYEFIWADAFEVLKD 52 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 + I DV+ A PCQ S+A Sbjct: 53 HELIDQFDVIHASPPCQAHSKA 74 >gi|325203406|gb|ADY98859.1| Modification methylase HgaIA [Neisseria meningitidis M01-240355] Length = 862 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 27/98 (27%) Query: 3 KITDLF--CGIGGIRLDLEQTFNHRNVECFFSSE-------INPYSVKTYQANFPNTLIF 53 LF G+G F EC ++E I Y+ K F + I Sbjct: 41 TYISLFSSAGVGC------YGFKTNGFECVATNELLEKRLKIQKYNQKC---RFDSGYIA 91 Query: 54 GDIAKIKTQ-----DIP----DHDVLLAGFPCQPFSQA 82 GDI +TQ +I + DV++A PCQ S A Sbjct: 92 GDITLPETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 129 >gi|238586055|ref|XP_002391053.1| hypothetical protein MPER_09571 [Moniliophthora perniciosa FA553] gi|215455233|gb|EEB91983.1| hypothetical protein MPER_09571 [Moniliophthora perniciosa FA553] Length = 494 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 3/52 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53 L+ +LF G GG+ + + V+ ++ EI+P + +Y+AN P+T+++ Sbjct: 401 LRGLELFSGAGGLGTGMNSSGY---VDTKWAVEISPAAAMSYRANHPDTIVY 449 >gi|268611959|ref|ZP_06145686.1| adenine/cytosine DNA methyltransferase [Ruminococcus flavefaciens FD-1] Length = 840 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 35/101 (34%), Gaps = 26/101 (25%) Query: 2 LKITDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNTLIFGD 55 L LF G+G F R EC ++EI + + N + I GD Sbjct: 9 LTYISLFSSAGVGC------YGFKMRGFECIATNEIVERRINVQKFNEKCKYETGYICGD 62 Query: 56 IAKIKT--------------QDIPDHDVLLAGFPCQPFSQA 82 I + + I + V++A PCQ S A Sbjct: 63 ITEESVKQHLLGEVERWRKHEKINNVTVVVATPPCQGMSVA 103 >gi|218199194|gb|EEC81621.1| hypothetical protein OsI_25142 [Oryza sativa Indica Group] Length = 1538 Score = 54.8 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59 D+F G GG+ L+Q ++ E + + + N P +F D + Sbjct: 1105 LDIFAGCGGLSQGLQQAGVSF---TKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1161 Query: 60 --------------------------KTQDIP---DHDVLLAGFPCQPFS 80 ++P + + + G PCQ FS Sbjct: 1162 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFS 1211 >gi|85094494|ref|XP_959891.1| hypothetical protein NCU02247 [Neurospora crassa OR74A] gi|13936826|gb|AAK49954.1|AF348971_1 DNA methyltransferase Dim-2 [Neurospora crassa] gi|28921348|gb|EAA30655.1| predicted protein [Neurospora crassa OR74A] Length = 1454 Score = 54.4 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 18/95 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L+ DL+CG G LE+ VE ++++I ++ TY AN P+ G + Sbjct: 840 LRGMDLYCGGGNFGRGLEEGGV---VEMRWANDIWDKAIHTYMANTPDPNKTNPFLGSVD 896 Query: 58 KIK--------TQDIP---DHDVLLAGFPCQPFSQ 81 + + ++P + D + AG PC FS Sbjct: 897 DLLRLALEGKFSDNVPRPGEVDFIAAGSPCPGFSL 931 >gi|293407987|ref|ZP_06651827.1| modification methylase NmeDIP [Escherichia coli B354] gi|301328020|ref|ZP_07221181.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1] gi|291472238|gb|EFF14720.1| modification methylase NmeDIP [Escherichia coli B354] gi|300845467|gb|EFK73227.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1] Length = 379 Score = 54.4 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 24/99 (24%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA-----NFPNTLIFG---- 54 + F G G + L E + E F +E +P + Y+ N P FG Sbjct: 8 VFSFFSGSGFLDLGFE----NSGYEVVFVNEFHPPFMDAYKHSRAVMNKP-IPRFGYAEE 62 Query: 55 DIAKIKTQDIPDHD----------VLLAGFPCQPFSQAG 83 I +I + + D+ + G PC FS AG Sbjct: 63 SIEEIDHKKLKDNIKALKKEKRLIGFIGGPPCPDFSVAG 101 >gi|237737311|ref|ZP_04567792.1| DNA-cytosine methyltransferase [Fusobacterium mortiferum ATCC 9817] gi|229421173|gb|EEO36220.1| DNA-cytosine methyltransferase [Fusobacterium mortiferum ATCC 9817] Length = 407 Score = 54.4 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 35/127 (27%), Gaps = 49/127 (38%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA---------------- 45 + DLF G GG+ + E + T + Sbjct: 1 MNCLDLFSGAGGLTEGFVRA----GYNIIAHVEKEFSASLTLKTRIAYHYLKQTNQLKIY 56 Query: 46 ---------------NFP----NTLIFGDIAKIKTQDI----------PDHDVLLAGFPC 76 + P +++I +I DI + D+++ G PC Sbjct: 57 YSYLNDEISREKLYSHIPSQLLDSVINEEINDESINDIYNKIDILRGNKEIDIIIGGPPC 116 Query: 77 QPFSQAG 83 Q +S G Sbjct: 117 QAYSLIG 123 >gi|290997570|ref|XP_002681354.1| predicted protein [Naegleria gruberi] gi|284094978|gb|EFC48610.1| predicted protein [Naegleria gruberi] Length = 435 Score = 54.4 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 35/113 (30%), Gaps = 33/113 (29%) Query: 4 ITDLFCGIGGIRLDLE--QTF-------NHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 I + + GIGG R+ LE Q F + +IN + Y F + Sbjct: 10 IAEFYSGIGGTRMSLEMIQAFFEAQVNGKKIKFNWIEAFDINENANTLYNNLFNHKPCAK 69 Query: 55 DIAKIKTQDIPDHD------------------------VLLAGFPCQPFSQAG 83 DI I D +H + PCQPF+ G Sbjct: 70 DIVHIPIGDFQNHYFKLFKNSSLEQAKKKLKTEQTRKLMWTMSPPCQPFTLNG 122 >gi|18700045|gb|AAL03947.1| DNA methyltransferase Cfr10IM [Citrobacter freundii] Length = 362 Score = 54.4 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 34/105 (32%), Gaps = 26/105 (24%) Query: 1 MLKIT--DLFCGIGGIRLDLEQTFNHRNVECFFSSEI-------NPYSVKTYQANFPNTL 51 M K F G G + L E H F +E +S K N P Sbjct: 1 MKKAIIFSFFSGAGFLDLGFE----HAGFTVEFVNEYHAPFLEAYKFSRKKLGINEPKYG 56 Query: 52 IF-GDIAKIKTQDIPDH-----D-------VLLAGFPCQPFSQAG 83 + GDI I +Q+ D D + G PC FS G Sbjct: 57 YYLGDIRDISSQNKEDFRKNVTDAKKSSLVGFIGGPPCPDFSVGG 101 >gi|321310707|ref|YP_004193036.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str. Langford 1] gi|319802551|emb|CBY93197.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str. Langford 1] Length = 340 Score = 54.4 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 13/74 (17%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIP--------DHDV 69 EQ EI+ + T + N P+ ++ DI + +D+ + D+ Sbjct: 23 EQAGFEH----LALIEIDEDASNTLRKNKPHWNVLCEDIKNVAERDLEKEFGIKKGELDL 78 Query: 70 LLAGFPCQPFSQAG 83 + G PCQ FS AG Sbjct: 79 ISGGAPCQNFSYAG 92 >gi|289616708|emb|CBI56658.1| unnamed protein product [Sordaria macrospora] Length = 872 Score = 54.4 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 9/86 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 D F G GG + H C + ++V + +ANF T+ D+ Sbjct: 306 YTAGDTFAGAGGAFCGISDAGLHLEF-CV---DNWEHAVASLKANFQGDGTTIYDMDMHD 361 Query: 59 --IKTQDIPDHDVLLAGFPCQPFSQA 82 I D+L PCQ +S A Sbjct: 362 LIINKDIRRRVDILHLSPPCQVWSPA 387 >gi|219119343|ref|XP_002180434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407907|gb|EEC47842.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 699 Score = 54.4 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 21/98 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDI 56 L + D+F GIG + L++ + + E + S YQ N P GDI Sbjct: 242 LTVLDMFAGIGTATVCLKRLGLQIS-KIV-RVEHDHISTHVYQENHDCSYNPTLADHGDI 299 Query: 57 AKI---KTQDIPD-----------HDVLLAGFPCQPFS 80 + K +D D D+++ G PC +S Sbjct: 300 KHVYCQKFEDFRDNLEHMAETHGPFDLVIGGPPCVDYS 337 >gi|164510146|emb|CAJ40944.1| putative DNA cytosine methyltransferase [Sordaria macrospora] Length = 872 Score = 54.4 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 9/86 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAK 58 D F G GG + H C + ++V + +ANF T+ D+ Sbjct: 306 YTAGDTFAGAGGAFCGISDAGLHLEF-CV---DNWEHAVASLKANFQGDGTTIYDMDMHD 361 Query: 59 --IKTQDIPDHDVLLAGFPCQPFSQA 82 I D+L PCQ +S A Sbjct: 362 LIINKDIRRRVDILHLSPPCQVWSPA 387 >gi|325266450|ref|ZP_08133127.1| modification methylase XorII [Kingella denitrificans ATCC 33394] gi|324981893|gb|EGC17528.1| modification methylase XorII [Kingella denitrificans ATCC 33394] Length = 371 Score = 54.4 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 11/72 (15%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDIP------DHDVLL 71 E H + +I+P Y+ NFP+T + D++ + D ++ Sbjct: 22 ELAGFH----TIAAIDIDPTLQSAYKNNFPHTKVLNKDLSLLDENGWRHILGRQKIDGVI 77 Query: 72 AGFPCQPFSQAG 83 G PCQ +S+ G Sbjct: 78 GGPPCQGYSRMG 89 >gi|302757657|ref|XP_002962252.1| hypothetical protein SELMODRAFT_76095 [Selaginella moellendorffii] gi|300170911|gb|EFJ37512.1| hypothetical protein SELMODRAFT_76095 [Selaginella moellendorffii] Length = 338 Score = 54.4 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 15/88 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------PNTLIFGD 55 +++ LF GIGG + L + S E N + + + + I D Sbjct: 216 IRMLSLFSGIGGAEVALHRAGIKLKF--VVSVESNVDNRRILERWWSTSGQTGQHRILDD 273 Query: 56 IAKIK-------TQDIPDHDVLLAGFPC 76 + + ++ D+++ G PC Sbjct: 274 VQDLTMAVVARLMEESGGFDLVIGGSPC 301 >gi|310796311|gb|EFQ31772.1| C-5 cytosine-specific DNA methylase [Glomerella graminicola M1.001] Length = 1141 Score = 54.4 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 16/93 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 L+ DLFCG G LE+ +E +++++N ++ TY AN NT G I + Sbjct: 616 LRGFDLFCGGGNFGRGLEEGGV---IEMNWANDLNVKAIHTYMANTANTVYPFAGSIDDL 672 Query: 60 KT--------QDIP---DHDVLLAGFPCQPFSQ 81 +T + +P D + G PC FS+ Sbjct: 673 QTLALQGKFSKKVPPVGSVDFVSGGSPCPGFSR 705 >gi|208964726|gb|ACI31553.1| MET1 [Nicotiana benthamiana] Length = 227 Score = 54.4 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+++ + ++ E + ++ N P +F Sbjct: 21 LDIFAGCGGLSEGLQRSGVS---DTKWAIEYEEPAGDAFKLNHPEAEVFIQNCNVFLRAV 77 Query: 54 ----GD----IAKIKTQDIP---------------DHDVLLAGFPCQPFS 80 GD I+ + ++ D + G PCQ FS Sbjct: 78 MQKCGDAEDCISTPEASELAAAMDENELNSLPLPGQVDFINGGPPCQGFS 127 >gi|218709639|ref|YP_002417260.1| cytosine-specific methyltransferase HgiDII; restriction system [Vibrio splendidus LGP32] gi|218322658|emb|CAV18834.1| Cytosine-specific methyltransferase HgiDII; restriction system [Vibrio splendidus LGP32] Length = 355 Score = 54.4 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 14/84 (16%) Query: 5 TDLFCGIGGIRLDLEQTFNH--RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 DLFCG GG+ L+Q + + + Y+ N + ++ + + Sbjct: 10 VDLFCGAGGLTHGLQQAGIDVRAGFDLESTC---KFP---YEHNNQAEFVQKSVSDLTGK 63 Query: 63 DI-PDHD-----VLLAGFPCQPFS 80 DI D +L PCQPFS Sbjct: 64 DIVSRFDEHAYTLLAGCAPCQPFS 87 >gi|257096314|sp|B1Q3J6|DNM1B_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1B; Short=OsMET1b; AltName: Full=DNA methyltransferase 1-2; Short=OsMET1-2 gi|171196103|dbj|BAG15929.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica Group] Length = 1529 Score = 54.0 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59 D+F G GG+ L+Q ++ E + + + N P +F D + Sbjct: 1096 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1152 Query: 60 --------------------------KTQDIP---DHDVLLAGFPCQPFS 80 ++P + + + G PCQ FS Sbjct: 1153 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFS 1202 >gi|42561466|ref|NP_975917.1| cytosine-specific DNA-methyltransferase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492965|emb|CAE77559.1| Cytosine-specific DNA-methyltransferase [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 116 Score = 54.0 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 8/60 (13%) Query: 32 SSEINPYSVKTYQANFP-NTLIFGDIAK-------IKTQDIPDHDVLLAGFPCQPFSQAG 83 + + N +++T++ N P + +I GDI IK ++++ G PCQ FS G Sbjct: 3 AVDFNKSALETFKHNMPWSDIICGDITNESIRQEIIKRATKLKVNMIIGGPPCQGFSNKG 62 >gi|307354298|ref|YP_003895349.1| DNA-cytosine methyltransferase [Methanoplanus petrolearius DSM 11571] gi|307157531|gb|ADN36911.1| DNA-cytosine methyltransferase [Methanoplanus petrolearius DSM 11571] Length = 421 Score = 54.0 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 38/130 (29%), Gaps = 54/130 (41%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-FPNTLIFGD------- 55 + D+F G GG+ + + E N + T F ++L D Sbjct: 7 VLDMFAGAGGLTEGFFR----NDFNIVTHIEKNTTACHTLATRAFYHSLAKKDRQDIYYD 62 Query: 56 -----------IAKIKTQDIP-------------------------------DHDVLLAG 73 I + K+ DIP D DV++ G Sbjct: 63 YYDQNLTREEFIEECKSLDIPDPGVFNCELSPERENSIKKMVGGRLEEAGRKDVDVIIGG 122 Query: 74 FPCQPFSQAG 83 PCQ +S G Sbjct: 123 PPCQAYSVIG 132 >gi|222636555|gb|EEE66687.1| hypothetical protein OsJ_23341 [Oryza sativa Japonica Group] Length = 1555 Score = 54.0 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59 D+F G GG+ L+Q ++ E + + + N P +F D + Sbjct: 1122 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1178 Query: 60 --------------------------KTQDIP---DHDVLLAGFPCQPFS 80 ++P + + + G PCQ FS Sbjct: 1179 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFS 1228 >gi|50509186|dbj|BAD30340.1| putative DNA methyltransferase [Oryza sativa Japonica Group] Length = 1548 Score = 54.0 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59 D+F G GG+ L+Q ++ E + + + N P +F D + Sbjct: 1115 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1171 Query: 60 --------------------------KTQDIP---DHDVLLAGFPCQPFS 80 ++P + + + G PCQ FS Sbjct: 1172 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFS 1221 >gi|109638476|ref|YP_656741.1| ORF86 [Ranid herpesvirus 1] gi|4219046|gb|AAD12284.1| ORF86 [Ranid herpesvirus 1] Length = 739 Score = 54.0 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 16/89 (17%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDI-------- 56 D+F G GG+ L L + ++ + P ++ +AN N T I D+ Sbjct: 280 DVFSGCGGLSLGLCDAGL---CDVRWAIDNWPVALDALKANHANATTIEADVGVALHALQ 336 Query: 57 ----AKIKTQDIPDHDVLLAGFPCQPFSQ 81 + + + ++ G PCQ +S Sbjct: 337 ESGTMSHPWPAVGEVECMVGGPPCQGYSI 365 >gi|194227134|ref|XP_001916681.1| PREDICTED: similar to tRNA (cytosine-5-)-methyltransferase (DNA (cytosine-5)-methyltransferase-like protein 2) (Dnmt2) (DNA methyltransferase homolog HsaIIP) (DNA MTase homolog HsaIIP) (M.HsaIIP) (PuMet) [Equus caballus] Length = 435 Score = 54.0 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 7/61 (11%) Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHD-----VLLAGFPCQPFSQA 82 + + ++N + + Y+ NFP+T + I+ + + D ++L PCQPF++ Sbjct: 72 QVVAAIDVNTVANEVYKYNFPHTQLLA--KTIEGITLEEFDRLSFNMILMSPPCQPFTRI 129 Query: 83 G 83 G Sbjct: 130 G 130 >gi|40021636|gb|AAR37052.1| putative cytosine DNA methyltransferase [Neurospora tetrasperma] Length = 246 Score = 54.0 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 11/87 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDI--- 56 D F G GG + H C + ++V + ANF +T I+ DI Sbjct: 89 YTAGDTFAGAGGASRGITDAGVHLEF-CV---DNWEHAVASLNANFQGQDTTIY-DIDMH 143 Query: 57 AKIKTQDIPD-HDVLLAGFPCQPFSQA 82 I ++I D+L PCQ +S A Sbjct: 144 NFIVDKEIRHRVDILHLSPPCQVWSPA 170 >gi|294084868|ref|YP_003551628.1| DNA-cytosine methyltransferase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664443|gb|ADE39544.1| DNA-cytosine methyltransferase [Candidatus Puniceispirillum marinum IMCC1322] Length = 538 Score = 54.0 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 46/132 (34%), Gaps = 53/132 (40%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK--TYQANF----PNTL--- 51 ML + D+F G GG+ Q + S E++P + K T + F P+ + Sbjct: 1 MLPVIDIFAGPGGLGEGFAQA----GFDVRLSVEMDPIAYKTLTLRKFFNQFTPDKVPSK 56 Query: 52 ----IFGDIAKIKTQDI-----------------------------------PDHD-VLL 71 + G+I + + + + P D +L+ Sbjct: 57 YYSFVRGEIDQSELEQLYPIEWEKAVSAVANIELGTEKGNSELYERLDKLVSPSEDFILI 116 Query: 72 AGFPCQPFSQAG 83 G PCQ +S AG Sbjct: 117 GGPPCQAYSLAG 128 >gi|171196104|dbj|BAG15930.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica Group] Length = 1486 Score = 54.0 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59 D+F G GG+ L+Q ++ E + + + N P +F D + Sbjct: 1053 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1109 Query: 60 --------------------------KTQDIP---DHDVLLAGFPCQPFS 80 ++P + + + G PCQ FS Sbjct: 1110 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFS 1159 >gi|57471644|emb|CAI39483.1| tRNA aspartic acid methyltransferase 1 [Homo sapiens] Length = 134 Score = 54.0 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIKTQDIP--DHDVLLAGFPCQPFSQ 81 + + ++N + + Y+ NFP+T + I I ++ D++L PCQPF++ Sbjct: 7 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTR 63 >gi|37201980|tpg|DAA01513.1| TPA_exp: putative cytosine-5 DNA methyltransferase [Oryza sativa (japonica cultivar-group)] Length = 1497 Score = 54.0 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59 D+F G GG+ L+Q ++ E + + + N P +F D + Sbjct: 1064 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1120 Query: 60 --------------------------KTQDIP---DHDVLLAGFPCQPFS 80 ++P + + + G PCQ FS Sbjct: 1121 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFS 1170 >gi|14573295|gb|AAK68034.1| DNA methyltransferase 2b [Homo sapiens] Length = 137 Score = 54.0 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIKTQDIP--DHDVLLAGFPCQPFSQ 81 + + ++N + + Y+ NFP+T + I I ++ D++L PCQPF++ Sbjct: 10 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTR 66 >gi|210610943|ref|ZP_03288668.1| hypothetical protein CLONEX_00858 [Clostridium nexile DSM 1787] gi|210152243|gb|EEA83250.1| hypothetical protein CLONEX_00858 [Clostridium nexile DSM 1787] Length = 170 Score = 54.0 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 5/60 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +LF G GG+ L +E+ + E + + + + N P+ +I D+A I Sbjct: 101 YTTIELFAGAGGLALGIEKA----GFDTLGLIEFDKDASDSLKKNRPDWRVINEDVANIS 156 >gi|38505603|ref|NP_942224.1| hypothetical protein ssl5068 [Synechocystis sp. PCC 6803] gi|38423627|dbj|BAD01838.1| unknown protein [Synechocystis sp. PCC 6803] Length = 75 Score = 54.0 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP 48 LK DLF G GG L EQT ++ EI+P Q ++P Sbjct: 9 LKHLDLFAGCGGFTLAAEQTRGK--IQTTQFVEIDPDCHAILQHHWP 53 >gi|319778257|ref|YP_004129170.1| modification methylase BepI-like protein [Taylorella equigenitalis MCE9] gi|317108281|gb|ADU91027.1| modification methylase BepI-like protein [Taylorella equigenitalis MCE9] Length = 130 Score = 54.0 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%) Query: 27 VECFFSSEINPYSVKTYQANF---PNTLIFGDIAKI------KTQDIPD-HDVLLAGFPC 76 + F+++I P + + F P+ I ++ + + IPD DVL GFPC Sbjct: 39 FKTVFANDIKPDAKIVWDNYFRRDPSIFKVASIVELVKSHNSELKKIPDSIDVLTGGFPC 98 Query: 77 QPFSQAG 83 Q FS +G Sbjct: 99 QDFSVSG 105 >gi|260431282|ref|ZP_05785253.1| DNA-cytosine methyltransferase [Silicibacter lacuscaerulensis ITI-1157] gi|260415110|gb|EEX08369.1| DNA-cytosine methyltransferase [Silicibacter lacuscaerulensis ITI-1157] Length = 497 Score = 54.0 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 50/130 (38%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKT------------------- 42 I DLF G GG+ Q ++ S E++ ++++T Sbjct: 7 IIDLFAGPGGLGEGFSQAGRDPGAPMKIKLSVEMDDHAIQTLQLRAFLRSFDEFPQEYHD 66 Query: 43 --------------YQANF------------PNTLIFGDIA---KIKTQDIPDHDVLLAG 73 Y AN+ + +F ++A +D + +L+ G Sbjct: 67 ALNCGSPLPDWADLYPANWKLAKEEARQRVLGESGVFEELAVELDRTREDYNGNTILIGG 126 Query: 74 FPCQPFSQAG 83 PCQ +S G Sbjct: 127 PPCQAYSLVG 136 >gi|331219056|ref|XP_003322205.1| hypothetical protein PGTG_03742 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301195|gb|EFP77786.1| hypothetical protein PGTG_03742 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1194 Score = 54.0 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 30/108 (27%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAK-- 58 ++ +LF GIG + + L + E F + + + +T NFP +T+I D+ + Sbjct: 509 IRHLELFGGIGSMSVALIELGLASQDETMF-IDFSIPACQTLSTNFPRSTIICADVNEVL 567 Query: 59 -----------------------IKTQDIP---DHDVLLAGFPCQPFS 80 I+ ++P D D++ AGFPC S Sbjct: 568 ALMINGKTESGQDFLVDQRTGKVIRVNELPRPGDFDLITAGFPCGSHS 615 >gi|228936963|ref|ZP_04099705.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228822678|gb|EEM68568.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 326 Score = 54.0 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 6/82 (7%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ++KI +LF GIG R L + + E VK Y A + + D+ Sbjct: 3 LIKILELFGGIGAPRKALVNLG--IDYKAIDYVEWQANRVKAYNALYDHLHKPQDVRGWN 60 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 D+L+ G PCQ S+A Sbjct: 61 L----KPDILVHGSPCQDNSRA 78 >gi|325136051|gb|EGC58661.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579] gi|325202478|gb|ADY97932.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149] Length = 351 Score = 54.0 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 15/88 (17%) Query: 5 TDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK- 60 LF GI E ++ ++ ++E+ P Y+A +P +I GDI + Sbjct: 4 ASLFSSAGI------AETYLHNAGIKIIAANELVPERANLYKALYPESKMIIGDILHEEV 57 Query: 61 ----TQDIPDH-DVLLAGFPCQPFSQAG 83 Q +P+ D L+A PCQ S AG Sbjct: 58 FQNLIQSVPNRLDFLIASPPCQGMSVAG 85 >gi|254526757|ref|ZP_05138809.1| modification methylase EcoRII [Prochlorococcus marinus str. MIT 9202] gi|221538181|gb|EEE40634.1| modification methylase EcoRII [Prochlorococcus marinus str. MIT 9202] Length = 298 Score = 53.6 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 19/24 (79%), Positives = 20/24 (83%) Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 T+ IP HDVLLAGFPCQPFS AG Sbjct: 2 DTKSIPSHDVLLAGFPCQPFSLAG 25 >gi|329962528|ref|ZP_08300509.1| C-5 cytosine-specific DNA methylase [Bacteroides fluxus YIT 12057] gi|328529784|gb|EGF56676.1| C-5 cytosine-specific DNA methylase [Bacteroides fluxus YIT 12057] Length = 370 Score = 53.6 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 15/94 (15%) Query: 4 ITDLFCGIGGIRLDLEQT--FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 + DLFCG GG+ +E+ R V+ + ++ ++ AN P+ L F DI ++ Sbjct: 21 VIDLFCGAGGLSEGVEEARLNGKRCVKVVCCVNHDKNAILSHDANIPDALHFIEDIRTLE 80 Query: 61 TQDI-----------PDHDVLL-AGFPCQPFSQA 82 I PD V+L A C FS+A Sbjct: 81 LSPINIIVERIRQLYPDVMVMLHASLECTNFSKA 114 >gi|269976808|ref|ZP_06183783.1| DNA methyltransferase Cfr42I [Mobiluncus mulieris 28-1] gi|269935005|gb|EEZ91564.1| DNA methyltransferase Cfr42I [Mobiluncus mulieris 28-1] Length = 404 Score = 53.6 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 11/68 (16%) Query: 27 VECFFSSEINPYSVKTYQAN----FPNT----LIFGDIAKIK-TQDIPD--HDVLLAGFP 75 VE +E N ++ +T + N +P ++ GD+ + ++ D++ AG P Sbjct: 24 VEHLAVAEWNRWACETIRENARLDYPLVRGVRVLEGDVRLVDWGSELSRQRIDIITAGPP 83 Query: 76 CQPFSQAG 83 CQPFS G Sbjct: 84 CQPFSLGG 91 >gi|227874774|ref|ZP_03992927.1| DNA methyltransferase Cfr42I [Mobiluncus mulieris ATCC 35243] gi|227844549|gb|EEJ54705.1| DNA methyltransferase Cfr42I [Mobiluncus mulieris ATCC 35243] Length = 420 Score = 53.6 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 11/68 (16%) Query: 27 VECFFSSEINPYSVKTYQAN----FPNT----LIFGDIAKIK-TQDIPD--HDVLLAGFP 75 VE +E N ++ +T + N +P ++ GD+ + ++ D++ AG P Sbjct: 40 VEHLAVAEWNRWACETIRENARLDYPLVRGVRVLEGDVRLVDWGSELSRQRIDIITAGPP 99 Query: 76 CQPFSQAG 83 CQPFS G Sbjct: 100 CQPFSLGG 107 >gi|14573297|gb|AAK68035.1| DNA methyltransferase 2c [Homo sapiens] Length = 115 Score = 53.6 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIKTQDIP--DHDVLLAGFPCQPFSQ 81 + + ++N + + Y+ NFP+T + I I ++ D++L PCQPF++ Sbjct: 10 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTR 66 >gi|301513727|ref|ZP_07238964.1| DNA-cytosine methyltransferase [Acinetobacter baumannii AB058] Length = 53 Score = 53.6 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIA 57 +K+ D F G GG L Q ++ + + + +TYQANFP L + DI Sbjct: 1 MKVIDFFSGCGGASEGLRQA----GLDITIGLDFDIKAAETYQANFPEALFYNVDIR 53 >gi|302836690|ref|XP_002949905.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis] gi|300264814|gb|EFJ49008.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis] Length = 2277 Score = 53.6 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59 D+F G GG+ + Q R ++ E + + + Y+ N P+ +F + + Sbjct: 1760 LDIFAGCGGLSEGMHQAGVAR---TRWAIEYDSEAAEAYKLNNPDAKVFCNNCNVLLRAA 1816 Query: 60 --------------------------KTQDIP---DHDVLLAGFPCQPFS 80 D+P +++ G PCQ +S Sbjct: 1817 MLKAGFEADCLADPTCVEAAAGLDAATLGDLPTPGSVALMMGGPPCQGYS 1866 >gi|120602087|ref|YP_966487.1| C-5 cytosine-specific DNA methylase [Desulfovibrio vulgaris DP4] gi|120562316|gb|ABM28060.1| C-5 cytosine-specific DNA methylase [Desulfovibrio vulgaris DP4] Length = 659 Score = 53.6 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 8/83 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 + DLF G GG L +E + +P +V ++ N P+T + D+ + Q Sbjct: 14 VVDLFAGGGGASLGIEMA----GCRVHAAVNHDPVAVSLHRENHPDTEHYTQDVFTVSPQ 69 Query: 63 DI---PDHDVLLAGFPCQPFSQA 82 + +L A C S+A Sbjct: 70 WVTRGRKVGLLWASPDCTHHSKA 92 >gi|89243223|gb|ABD64771.1| Met1 [Volvox carteri f. nagariensis] Length = 2262 Score = 53.6 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59 D+F G GG+ + Q R ++ E + + + Y+ N P+ +F + + Sbjct: 1745 LDIFAGCGGLSEGMHQAGVAR---TRWAIEYDSEAAEAYKLNNPDAKVFCNNCNVLLRAA 1801 Query: 60 --------------------------KTQDIP---DHDVLLAGFPCQPFS 80 D+P +++ G PCQ +S Sbjct: 1802 MLKAGFEADCLADPTCVEAAAGLDAATLGDLPTPGSVALMMGGPPCQGYS 1851 >gi|326571789|gb|EGE21795.1| cytosine-specific methyltransferase [Moraxella catarrhalis BC7] Length = 55 Score = 53.6 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 4/40 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK 41 DLF GIGG ++ EC F+SE + + K Sbjct: 4 FTFIDLFAGIGGFHFAMQA----VGGECVFASEWDLNAQK 39 >gi|195873685|ref|ZP_02698511.2| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632788|gb|EDX51242.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 382 Score = 53.6 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 27/101 (26%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA-- 57 + F G+G + + + + + +EIN + ++ ++ ++G DI Sbjct: 5 VLSFFTGVGLLDMGFRSA----DFDIVWHNEINTDFITGFK--HGHSKLYGVNPQDINLF 58 Query: 58 --------------KIKTQDIPDHDV-LLAGFPCQPFSQAG 83 + + I ++D ++ G PC FS AG Sbjct: 59 EGSIETISKSIVRENVSSGLIDNNDFGIIGGPPCPDFSNAG 99 >gi|164429650|ref|XP_001728555.1| hypothetical protein NCU11205 [Neurospora crassa OR74A] gi|157073563|gb|EDO65464.1| hypothetical protein NCU11205 [Neurospora crassa OR74A] Length = 654 Score = 53.6 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 31/86 (36%), Gaps = 9/86 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDI---A 57 D F G GG + H C + ++V + ANF DI Sbjct: 93 YTAGDTFAGAGGASRGITDAGVHLEF-CV---DNWEHAVASLNANFQGQDTTTYDIDMHN 148 Query: 58 KIKTQDIPD-HDVLLAGFPCQPFSQA 82 I ++I D+L PCQ +S A Sbjct: 149 FIVNKEIRHRVDILHLSPPCQVWSPA 174 >gi|16945407|emb|CAC10091.2| related to cytosine C5-DNA methyltransferase [Neurospora crassa] Length = 742 Score = 53.6 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 31/86 (36%), Gaps = 9/86 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDI---A 57 D F G GG + H C + ++V + ANF DI Sbjct: 284 YTAGDTFAGAGGASRGITDAGVHLEF-CV---DNWEHAVASLNANFQGQDTTTYDIDMHN 339 Query: 58 KIKTQDIPD-HDVLLAGFPCQPFSQA 82 I ++I D+L PCQ +S A Sbjct: 340 FIVNKEIRHRVDILHLSPPCQVWSPA 365 >gi|20531189|gb|AAM27408.1|AF500227_1 RIP defective [Neurospora crassa] Length = 845 Score = 53.6 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 31/86 (36%), Gaps = 9/86 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDI---A 57 D F G GG + H C + ++V + ANF DI Sbjct: 284 YTAGDTFAGAGGASRGITDAGVHLEF-CV---DNWEHAVASLNANFQGQDTTTYDIDMHN 339 Query: 58 KIKTQDIPD-HDVLLAGFPCQPFSQA 82 I ++I D+L PCQ +S A Sbjct: 340 FIVNKEIRHRVDILHLSPPCQVWSPA 365 >gi|307826333|ref|ZP_07656539.1| C-5 cytosine-specific DNA methylase [Methylobacter tundripaludum SV96] gi|307732631|gb|EFO03502.1| C-5 cytosine-specific DNA methylase [Methylobacter tundripaludum SV96] Length = 247 Score = 53.6 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 29/82 (35%), Gaps = 21/82 (25%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 ML + LF GIG + E C P+ + GDI K Sbjct: 1 ML-VLSLFPGIGLLDRGFEDAGF-----CVV--------------RGPDLIFGGDIRKFT 40 Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82 D ++ G PCQ FS+A Sbjct: 41 VMP-GKFDGVIGGPPCQDFSKA 61 >gi|2887280|emb|CAA05207.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum] Length = 1559 Score = 53.6 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 37/113 (32%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L D+F G GG+ L+ + + ++ E + ++ N P T +F Sbjct: 1121 LSTLDIFAGCGGLSEGLQHSGVT---DTNWAIEYEAPAGDAFRLNHPKTKVFIHNCNVIL 1177 Query: 54 -------GD----IAKIKTQDIP---------------DHDVLLAGFPCQPFS 80 GD I+ + ++ D + G PCQ FS Sbjct: 1178 RAVMQKCGDSDDCISTPEASELAAAMDESELNSLPLPGQVDFINGGPPCQGFS 1230 >gi|325685533|gb|EGD27624.1| modification methylase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 395 Score = 53.6 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 15/29 (51%), Positives = 18/29 (62%) Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI K+ D+PD D+L FPCQ S AG Sbjct: 90 DITKVHATDLPDGDILTYSFPCQDLSIAG 118 >gi|218191946|gb|EEC74373.1| hypothetical protein OsI_09692 [Oryza sativa Indica Group] Length = 921 Score = 53.6 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 35/87 (40%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + ++ S E + + ++ + T + D+ Sbjct: 555 MNVLSLFSGIGGAEVALHRLGIR--MKTVISVEKSEVNRTILKSWWDQTQTGTLIEIADV 612 Query: 57 AKIKTQDIP-------DHDVLLAGFPC 76 + T+ I D+++ G PC Sbjct: 613 RHLTTERIETFIRRFGGFDLVIGGSPC 639 >gi|109638623|ref|YP_656628.1| DNA (cytosine-5-)-methyltransferase [Ranid herpesvirus 2] gi|109138110|gb|ABG25588.1| ORF120 [Ranid herpesvirus 2] Length = 861 Score = 53.6 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 16/88 (18%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------NTLIFG--D-- 55 D FCG GG+ L LEQ+ + + + + ++ T+ N + + D Sbjct: 429 DAFCGAGGLSLGLEQSGL---CDVKWGIDTDAAALATFSKNHNFSVCAYHEPLENMLDKV 485 Query: 56 IAKIKTQDIP---DHDVLLAGFPCQPFS 80 +A + P + L+ G PCQ FS Sbjct: 486 VADPEQSYYPRPGQVECLVGGPPCQGFS 513 >gi|261414310|gb|ACX83573.1| DNA chromomethylase [Hieracium piloselloides] Length = 607 Score = 53.6 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNT 50 +++ DL+ G G + L N +V ++ ++N Y+ ++ + N P T Sbjct: 37 MRMLDLYSGCGAMSTGLCLGANMADVNLVTRWAVDLNKYACESLKLNHPET 87 Score = 35.9 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 214 DVDVITGGPPCQGIS 228 >gi|255588381|ref|XP_002534588.1| cytosine-specific methyltransferase, putative [Ricinus communis] gi|223524973|gb|EEF27795.1| cytosine-specific methyltransferase, putative [Ricinus communis] Length = 362 Score = 53.6 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 40/107 (37%), Gaps = 32/107 (29%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--IAKI 59 LK DLF G L + +E F+ E + + +T++ NF L D IA+ Sbjct: 13 LKFIDLFAGC----GGLSLGLSLGGLEGQFAIERDAMAFETFKENF---LAARDLPIARF 65 Query: 60 -----------KTQDIPD------------HDVLLAGFPCQPFSQAG 83 ++ D DVL G PCQ FS AG Sbjct: 66 AWPQWLALQPWSIDELLDKHGIEVAGLAHQIDVLAGGPPCQGFSFAG 112 >gi|332308313|ref|YP_004436164.1| DNA-cytosine methyltransferase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175642|gb|AEE24896.1| DNA-cytosine methyltransferase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 522 Score = 53.6 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 39/134 (29%), Gaps = 53/134 (39%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKTYQ--ANF---------- 47 KI DLF G GG+ + + S E + +T + A F Sbjct: 6 KIIDLFSGPGGLSEGFSALKDPNGNSPFKIAISIEKEKSAHRTLKLRAFFRQFGDAVPSE 65 Query: 48 ------------PNTLIF------------------------GD-IAKIKTQDIPDHD-V 69 P ++ D I + I + D V Sbjct: 66 YYEFLKGELGKTPEEQLYKIPKFSEQVSAAESEAQNLELGKDNDLITSKIAKAIGNDDCV 125 Query: 70 LLAGFPCQPFSQAG 83 L+ G PCQ +S AG Sbjct: 126 LIGGPPCQAYSLAG 139 >gi|242042531|ref|XP_002468660.1| hypothetical protein SORBIDRAFT_01g049860 [Sorghum bicolor] gi|241922514|gb|EER95658.1| hypothetical protein SORBIDRAFT_01g049860 [Sorghum bicolor] Length = 740 Score = 53.6 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + ++ S E + + ++ + T + D+ Sbjct: 618 MNVLSLFSGIGGAEVALHRLGIR--MKTVISVEKSEVNRTILRSWWDQTQTGTLIEINDV 675 Query: 57 AKIKTQDIP-------DHDVLLAGFPC 76 + ++ I D+++ G PC Sbjct: 676 QTLTSERIEAYIRRFGGFDLVIGGSPC 702 >gi|169608972|ref|XP_001797905.1| hypothetical protein SNOG_07571 [Phaeosphaeria nodorum SN15] gi|160701754|gb|EAT85037.2| hypothetical protein SNOG_07571 [Phaeosphaeria nodorum SN15] Length = 403 Score = 53.6 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 32/90 (35%), Gaps = 17/90 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L D+FCG GG +Q + + + + +++ Y+ N L F Sbjct: 321 LTFGDVFCGAGGSSQGAKQA----GLSIKWGLDFDDDAIEAYELNHTGALPF----NCSA 372 Query: 62 QDIPD---------HDVLLAGFPCQPFSQA 82 D P DV+ PC FS A Sbjct: 373 HDFPPEGYTSEQLRVDVVHLSPPCCFFSPA 402 >gi|258568064|ref|XP_002584776.1| predicted protein [Uncinocarpus reesii 1704] gi|237906222|gb|EEP80623.1| predicted protein [Uncinocarpus reesii 1704] Length = 1033 Score = 53.6 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 20/97 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L+ +LF G G LE+ + ++ E + TY+AN ++ Sbjct: 584 LRALNLFSGGGSFDRGLEEG---TAIRSEWAVEWGLDQMLTYRANHESSHDLKLFRGSVN 640 Query: 54 --------GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 GD + + + + + + G PCQ +S A Sbjct: 641 DYLALALKGDKSDLIAK-LGQVEFISGGSPCQGYSLA 676 >gi|294778769|ref|ZP_06744188.1| C-5 cytosine-specific DNA methylase [Bacteroides vulgatus PC510] gi|294447425|gb|EFG16006.1| C-5 cytosine-specific DNA methylase [Bacteroides vulgatus PC510] Length = 609 Score = 53.6 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 15/94 (15%) Query: 4 ITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 + DLFCG GG+ +E ++ + + ++ ++ AN P+ L F DI ++ Sbjct: 21 VIDLFCGAGGLSEGVEAARLDGNKCAKVVCCVNHDKNAILSHDANIPDALHFIEDIRTLE 80 Query: 61 TQDI-----------PDHDVLL-AGFPCQPFSQA 82 I PD ++L A C FS+A Sbjct: 81 LSPISTIVERIRQLYPDAMIMLHASLECTNFSKA 114 >gi|239982029|ref|ZP_04704553.1| DNA modification methylase [Streptomyces albus J1074] gi|291453880|ref|ZP_06593270.1| C-5 cytosine-specific DNA methylase [Streptomyces albus J1074] gi|291356829|gb|EFE83731.1| C-5 cytosine-specific DNA methylase [Streptomyces albus J1074] Length = 409 Score = 53.6 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 36/115 (31%), Gaps = 37/115 (32%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---------- 51 L ++ G GG + L + EI+P++ T N Sbjct: 7 LTSIEICAGAGGQAVGLHGA----DFRHLALVEIDPHAAATLARNVRKHPQWAWEREHCL 62 Query: 52 -IFGDIAKIKT-QDIP---------------------DHDVLLAGFPCQPFSQAG 83 I D+ K + +P D D+L G PC PFS AG Sbjct: 63 IINEDVNDFKPLERVPNPVKAQGKAGSPKQAEFLKPGDLDLLAGGVPCPPFSAAG 117 >gi|254884614|ref|ZP_05257324.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_3_47FAA] gi|254837407|gb|EET17716.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_3_47FAA] Length = 611 Score = 53.6 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 15/94 (15%) Query: 4 ITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 + DLFCG GG+ +E+ +R + + ++ ++ AN P+ L F DI ++ Sbjct: 21 VIDLFCGAGGLSEGVEEARLDGNRCAKVVCCVNHDKNAILSHDANIPDALHFIEDIRTLE 80 Query: 61 TQDI-----------PDHDVLL-AGFPCQPFSQA 82 I PD ++L A C FS+A Sbjct: 81 LSPISTIVERIRQLYPDAMIMLHASLECTNFSKA 114 >gi|295836816|ref|ZP_06823749.1| modification methylase NaeI [Streptomyces sp. SPB74] gi|295826219|gb|EDY44437.2| modification methylase NaeI [Streptomyces sp. SPB74] Length = 449 Score = 53.6 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 25/103 (24%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIFG- 54 L ++ G GG L L + E + +V T ++N + + G Sbjct: 14 LTSVEICAGAGGQALGLHNAGFGHS----ALVEWDANAVGTLRSNSVRTFGWSSEKAAGL 69 Query: 55 ---DIAKI-KTQDI----------PDHDVLLAGFPCQPFSQAG 83 D+ +D D+ G PC PFS AG Sbjct: 70 RNMDVRDFKNEEDFKALKKAADAGRYIDLFAGGVPCPPFSLAG 112 >gi|57471643|emb|CAI39482.1| tRNA aspartic acid methyltransferase 1 [Homo sapiens] Length = 112 Score = 53.6 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIKTQDIP--DHDVLLAGFPCQPFSQ 81 + + ++N + + Y+ NFP+T + I I ++ D++L PCQPF++ Sbjct: 7 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTR 63 >gi|31074171|gb|AAP20556.1| DNA cytosine-5 methyltransferase 2 isoform gamma [Bos taurus] Length = 63 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53 L+ +L+ GIGG+ L ++ + + ++N + + Y+ NFP+T + Sbjct: 4 LRALELYSGIGGMHQALRESCIPA--QVVAAVDVNTVANEVYKYNFPHTQLL 53 >gi|327356617|gb|EGE85474.1| C-5 cytosine methyltransferase DmtA [Ajellomyces dermatitidis ATCC 18188] Length = 661 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI- 59 D FCG GG+ Q N + + + ++ +++ NF + + + D+A Sbjct: 324 YTFGDGFCGAGGVSRGALQAGLRLN----WGFDHSLSAMDSFRLNFESAIGYTSDVADFL 379 Query: 60 --KTQDIPDHDVLLAGFPCQPFSQA 82 +I D+L PCQ FS A Sbjct: 380 ANSPAEI-MVDILHFSPPCQTFSPA 403 >gi|261196301|ref|XP_002624554.1| C-5 cytosine methyltransferase DmtA [Ajellomyces dermatitidis SLH14081] gi|239587687|gb|EEQ70330.1| C-5 cytosine methyltransferase DmtA [Ajellomyces dermatitidis SLH14081] Length = 661 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI- 59 D FCG GG+ Q N + + + ++ +++ NF + + + D+A Sbjct: 324 YTFGDGFCGAGGVSRGALQAGLRLN----WGFDHSLSAMDSFRLNFESAIGYTSDVADFL 379 Query: 60 --KTQDIPDHDVLLAGFPCQPFSQA 82 +I D+L PCQ FS A Sbjct: 380 ANSPAEI-MVDILHFSPPCQTFSPA 403 >gi|237746251|ref|ZP_04576731.1| C-5 cytosine-specific DNA methylase [Oxalobacter formigenes HOxBLS] gi|229377602|gb|EEO27693.1| C-5 cytosine-specific DNA methylase [Oxalobacter formigenes HOxBLS] Length = 489 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG-DIAK 58 I DLF G GG +EQ +I +P ++ + AN P T + D+ + Sbjct: 15 IVDLFAGGGGASTGIEQAIGR-------HVDIAINHDPEAIALHAANHPQTKHYCTDVFE 67 Query: 59 IKT---QDIPDHDVLLAGFPCQPFSQA 82 I + +L A C+ FS+A Sbjct: 68 IDPVSATNSQPVGLLWASPDCKHFSKA 94 >gi|294789078|ref|ZP_06754317.1| adenine/cytosine DNA methyltransferase [Simonsiella muelleri ATCC 29453] gi|294482819|gb|EFG30507.1| adenine/cytosine DNA methyltransferase [Simonsiella muelleri ATCC 29453] Length = 837 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 25/100 (25%) Query: 2 LKITDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNTLIFGD 55 L LF G+G +Q EC ++E+ P + + N + I GD Sbjct: 6 LTYISLFSSAGVGC--YGFKQA----GFECIATNELLPKRLNIQKLNNKCRYETGYIAGD 59 Query: 56 IAKIKTQ-----DIPD--------HDVLLAGFPCQPFSQA 82 I + +T+ +I DV++A PCQ S A Sbjct: 60 IQQAETKQAIYAEIEKWHKLGNDKVDVVIATPPCQGMSVA 99 >gi|239614647|gb|EEQ91634.1| C-5 cytosine methyltransferase DmtA [Ajellomyces dermatitidis ER-3] Length = 661 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI- 59 D FCG GG+ Q N + + + ++ +++ NF + + + D+A Sbjct: 324 YTFGDGFCGAGGVSRGALQAGLRLN----WGFDHSLSAMDSFRLNFESAIGYTSDVADFL 379 Query: 60 --KTQDIPDHDVLLAGFPCQPFSQA 82 +I D+L PCQ FS A Sbjct: 380 ANSPAEI-MVDILHFSPPCQTFSPA 403 >gi|7671507|emb|CAB89348.1| putative protein [Arabidopsis thaliana] Length = 375 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 15/88 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55 + + LF GIGG + L + + S EI+ + ++ + T G D Sbjct: 249 INVLSLFTGIGGGEVALHRL--QIKMNVVVSVEISDANRNILRSFWEQTNQKGILREFKD 306 Query: 56 IAKIKTQDIPD-------HDVLLAGFPC 76 + K+ I D+++ G PC Sbjct: 307 VQKLDDNTIERLMDEYGGFDLVIGGSPC 334 >gi|42567866|ref|NP_197042.2| DRM1 (domains rearranged methylase 1); DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana] gi|257096638|sp|Q9LXE5|DRM1_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase DRM1; AltName: Full=Protein DOMAINS REARRANGED METHYLASE 1 gi|332004771|gb|AED92154.1| DNA (cytosine-5)-methyltransferase DRM1 [Arabidopsis thaliana] Length = 624 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 15/88 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55 + + LF GIGG + L + + S EI+ + ++ + T G D Sbjct: 498 INVLSLFTGIGGGEVALHRL--QIKMNVVVSVEISDANRNILRSFWEQTNQKGILREFKD 555 Query: 56 IAKIKTQDIPD-------HDVLLAGFPC 76 + K+ I D+++ G PC Sbjct: 556 VQKLDDNTIERLMDEYGGFDLVIGGSPC 583 >gi|213622824|ref|ZP_03375607.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 324 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 19/22 (86%), Positives = 19/22 (86%) Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 Q IP HDVLLAGFPCQPFS AG Sbjct: 15 QHIPQHDVLLAGFPCQPFSLAG 36 >gi|229824476|ref|ZP_04450545.1| hypothetical protein GCWU000282_01799 [Catonella morbi ATCC 51271] gi|229786077|gb|EEP22191.1| hypothetical protein GCWU000282_01799 [Catonella morbi ATCC 51271] Length = 414 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 15/29 (51%), Positives = 19/29 (65%) Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI KI QD+P+ D+L FPCQ S +G Sbjct: 107 DITKIHAQDLPEADILTYSFPCQDLSISG 135 >gi|29467228|dbj|BAC67060.1| DNA methyltransferase [Nicotiana tabacum] Length = 608 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 11/86 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTY--QAN-FPNTLIFGDIA 57 + + LF GIGG + L + N SE+N V+++ Q N N + F D+ Sbjct: 482 INVLSLFSGIGGGEVALYRLGIPLNTVVSVEKSEVNRDIVRSWWEQTNQRGNLIHFNDVQ 541 Query: 58 KIK-------TQDIPDHDVLLAGFPC 76 ++ + D+++ G PC Sbjct: 542 QLNGDRLEQLIESFGGFDLVIGGSPC 567 >gi|7573311|emb|CAB87629.1| putative protein [Arabidopsis thaliana] Length = 413 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 15/88 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGD 55 + + LF GIGG + L + ++ S EI+ + + + T + F D Sbjct: 289 INVLSLFTGIGGGEVALHRL--QIKMKLVVSVEISKVNRNILKDFWEQTNQTGELIEFSD 346 Query: 56 IAKIKTQDIP-------DHDVLLAGFPC 76 I + I D+++ G PC Sbjct: 347 IQHLTNDTIEGLMEKYGGFDLVIGGSPC 374 >gi|242052551|ref|XP_002455421.1| hypothetical protein SORBIDRAFT_03g010500 [Sorghum bicolor] gi|241927396|gb|EES00541.1| hypothetical protein SORBIDRAFT_03g010500 [Sorghum bicolor] Length = 608 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + ++ S E + + ++ + T + D+ Sbjct: 485 MNVLSLFSGIGGAEVALHRLGIR--MKTVISVEKSEVNRTILKSWWDQTQTGLLIEICDV 542 Query: 57 AKIKTQDIP-------DHDVLLAGFPC 76 + ++ I D+++ G PC Sbjct: 543 QTLTSERIEAYVRRIGGFDLVIGGSPC 569 >gi|126540951|emb|CAM46948.1| DNA (cytosine-5-)-methyltransferase 3 [Danio rerio] Length = 1448 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 16/89 (17%) Query: 2 LKITDLFCGI--GGI---RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD- 55 +++ LF GI G + L + VE + +SEI+ S+ N + D Sbjct: 1164 IRVLSLFDGIATGYLVLRDLGFK-------VEKYVASEIDEESITISMVNHDGKITQVDD 1216 Query: 56 ---IAKIKTQDIPDHDVLLAGFPCQPFSQ 81 I K + D+L+ G PC S Sbjct: 1217 VKNITKKHIEQWGPFDLLIGGSPCNDLSI 1245 >gi|159461700|gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis] Length = 925 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 6/65 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 L + DL+ G G + L N + E ++ +INPY+ ++ + N P+T + Sbjct: 351 LSLLDLYSGCGAMSTGLCLGANLSGLKLETRWAVDINPYACESLKLNHPHTE----VRNE 406 Query: 60 KTQDI 64 K +D Sbjct: 407 KAEDF 411 Score = 35.9 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 8/15 (53%) Query: 66 DHDVLLAGFPCQPFS 80 DV+ G PCQ S Sbjct: 528 KVDVICGGPPCQGIS 542 >gi|300689724|ref|YP_003750719.1| DNA (cytosine-5-)-methyltransferase [Ralstonia solanacearum PSI07] gi|299076784|emb|CBJ49392.1| putative DNA (cytosine-5-)-methyltransferase [Ralstonia solanacearum PSI07] Length = 540 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 39/133 (29%), Gaps = 53/133 (39%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKTY---------------QA 45 I DLF G GG+ +H+ E S E +P + +T + Sbjct: 5 IIDLFAGPGGLGEGFASLSDHKGRSFFEIGLSIEKDPVAHRTLTLRAVFRHLRGTKDVKH 64 Query: 46 NFP---NTLIFGDIAKIKTQ--------------DIPDHD------------------VL 70 + + D +I ++ D VL Sbjct: 65 YYDYIRGHVSEADFRRIPAVAKAFAHATKEARCLELGKSDENSIDSEIRAALKGQETWVL 124 Query: 71 LAGFPCQPFSQAG 83 + G PCQ +S AG Sbjct: 125 VGGPPCQAYSLAG 137 >gi|190337984|gb|AAI62467.1| DNA (cytosine-5-)-methyltransferase 3 [Danio rerio] Length = 1448 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 16/89 (17%) Query: 2 LKITDLFCGI--GGI---RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD- 55 +++ LF GI G + L + VE + +SEI+ S+ N + D Sbjct: 1164 IRVLSLFDGIATGYLVLRDLGFK-------VEKYVASEIDEESITISMVNHDGKITQVDD 1216 Query: 56 ---IAKIKTQDIPDHDVLLAGFPCQPFSQ 81 I K + D+L+ G PC S Sbjct: 1217 VKNITKKHIEQWGPFDLLIGGSPCNDLSI 1245 >gi|62719324|ref|NP_571461.1| DNA (cytosine-5-)-methyltransferase 3 [Danio rerio] gi|62433259|dbj|BAD95477.1| DNA methyltransferase [Danio rerio] Length = 1448 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 16/89 (17%) Query: 2 LKITDLFCGI--GGI---RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD- 55 +++ LF GI G + L + VE + +SEI+ S+ N + D Sbjct: 1164 IRVLSLFDGIATGYLVLRDLGFK-------VEKYVASEIDEESITISMVNHDGKITQVDD 1216 Query: 56 ---IAKIKTQDIPDHDVLLAGFPCQPFSQ 81 I K + D+L+ G PC S Sbjct: 1217 VKNITKKHIEQWGPFDLLIGGSPCNDLSI 1245 >gi|38505857|ref|NP_942475.1| hypothetical protein ssr6032 [Synechocystis sp. PCC 6803] gi|38423881|dbj|BAD02089.1| ssr6032 [Synechocystis sp. PCC 6803] Length = 72 Score = 53.2 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP 48 LK DLF G GG L EQT ++ EI+P Q ++P Sbjct: 10 LKHLDLFAGCGGFTLAAEQTRGK--IQTTQFVEIDPDCHTILQHHWP 54 >gi|145294975|ref|YP_001137796.1| hypothetical protein cgR_0920 [Corynebacterium glutamicum R] gi|140844895|dbj|BAF53894.1| hypothetical protein [Corynebacterium glutamicum R] Length = 331 Score = 52.8 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 9/61 (14%) Query: 32 SSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDI--------PDHDVLLAGFPCQPFSQA 82 + E +P + T++ NFP T+ F D+ + ++I D ++ G PCQ FS Sbjct: 4 AVEFDPVHMATHEYNFPETVSFARDVQTLSGEEILVGTGLKGEDIHAVVGGAPCQGFSMI 63 Query: 83 G 83 G Sbjct: 64 G 64 >gi|30684984|ref|NP_196966.2| DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2); N-methyltransferase [Arabidopsis thaliana] gi|75184795|sp|Q9M548|DRM2_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase DRM2; AltName: Full=Protein DOMAINS REARRANGED METHYLASE 2 gi|7658293|gb|AAF66129.1|AF240695_1 cytosine methyltransferase [Arabidopsis thaliana] gi|51970418|dbj|BAD43901.1| putative protein [Arabidopsis thaliana] gi|62319261|dbj|BAD94486.1| putative protein [Arabidopsis thaliana] gi|110738276|dbj|BAF01067.1| hypothetical protein [Arabidopsis thaliana] gi|332004673|gb|AED92056.1| DNA (cytosine-5)-methyltransferase DRM2 [Arabidopsis thaliana] Length = 626 Score = 52.8 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 15/88 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGD 55 + + LF GIGG + L + ++ S EI+ + + + T + F D Sbjct: 502 INVLSLFTGIGGGEVALHRL--QIKMKLVVSVEISKVNRNILKDFWEQTNQTGELIEFSD 559 Query: 56 IAKIKTQDIP-------DHDVLLAGFPC 76 I + I D+++ G PC Sbjct: 560 IQHLTNDTIEGLMEKYGGFDLVIGGSPC 587 >gi|154277578|ref|XP_001539629.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150413214|gb|EDN08597.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 699 Score = 52.8 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 D FCG GG+ Q N + + + ++ +++ NF + + D+A Sbjct: 323 YTFGDGFCGAGGVSRGALQAGLRLN----WGFDHSVSAMDSFRLNFETAIGYTSDVADFL 378 Query: 61 TQ---DIPDHDVLLAGFPCQPFSQA 82 +I D+L PCQ FS A Sbjct: 379 ANSHTEI-MVDILHFSPPCQTFSPA 402 >gi|225430208|ref|XP_002282454.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1239 Score = 52.8 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ + + GIGG+R L++ N + + +IN + YQ NF + K Sbjct: 15 RVLEFYSGIGGMRYSLKRGG--VNAKIVEAFDINNIANDVYQHNFGHRPCQTSDTHEKMI 72 Query: 63 DI 64 +I Sbjct: 73 EI 74 >gi|86749313|ref|YP_485809.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2] gi|86572341|gb|ABD06898.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2] Length = 358 Score = 52.8 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG G+ L L ++ +++P ++ N + D++ + + + Sbjct: 17 VDLFCGAAGLSLGL----KISGIKVAAGIDLDPACRFPFETNIGAMFVEADVSSLSGKAV 72 Query: 65 PDH--D----VLLAGFPCQPFS 80 D VL PCQPFS Sbjct: 73 DSLFGDASIRVLAGCAPCQPFS 94 >gi|254416032|ref|ZP_05029788.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196177207|gb|EDX72215.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 398 Score = 52.8 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Query: 25 RNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKIKTQDIPD-HDVLLAGFPCQPF 79 S +I P S T + P +FG D+ ++ ++ D++ G PCQPF Sbjct: 84 AGFTHVASYDILPESGITLRNVRPEWTVFGGEQGDVTQVDWREYRGLVDIIHGGPPCQPF 143 Query: 80 SQAG 83 S AG Sbjct: 144 SVAG 147 >gi|207108548|ref|ZP_03242710.1| type II DNA modification enzyme [Helicobacter pylori HPKX_438_CA4C1] Length = 171 Score = 52.8 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/31 (54%), Positives = 22/31 (70%) Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 FGD+ +I D+PD D L++GFPCQ FS G Sbjct: 5 FGDLMRINPNDLPDFDALISGFPCQAFSING 35 >gi|194861352|ref|XP_001969765.1| GG23765 [Drosophila erecta] gi|190661632|gb|EDV58824.1| GG23765 [Drosophila erecta] Length = 331 Score = 52.8 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 5/73 (6%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDIPD--HDVL 70 + + + E + ++N + Y N+ N L+ +I + +++ +VL Sbjct: 1 MHYAFKYA--QLDGEIVAALDVNTVANAVYAHNYGNNLVKTRNIQSLSAKEVNKLQANVL 58 Query: 71 LAGFPCQPFSQAG 83 L PCQP+++ G Sbjct: 59 LMSPPCQPYTRQG 71 >gi|297811595|ref|XP_002873681.1| hypothetical protein ARALYDRAFT_488304 [Arabidopsis lyrata subsp. lyrata] gi|297319518|gb|EFH49940.1| hypothetical protein ARALYDRAFT_488304 [Arabidopsis lyrata subsp. lyrata] Length = 629 Score = 52.8 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 15/88 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGD 55 + + LF GIGG + L + ++ S EI+ + + + T + F D Sbjct: 505 INVLSLFTGIGGGEVALHRL--QIRMKLVVSVEISKVNRNILKDFWEQTNQTGVLIEFSD 562 Query: 56 IAKIKTQDIP-------DHDVLLAGFPC 76 I + I D+++ G PC Sbjct: 563 IQHLTNDTIEGLMEKYGGFDLVIGGSPC 590 >gi|89901847|ref|YP_524318.1| DNA-cytosine methyltransferase [Rhodoferax ferrireducens T118] gi|89346584|gb|ABD70787.1| DNA-cytosine methyltransferase [Rhodoferax ferrireducens T118] Length = 517 Score = 52.8 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 42/133 (31%), Gaps = 53/133 (39%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKT--YQANF--------PN- 49 + DLF G GG+ F+ S E +P + +T +A F P+ Sbjct: 9 VIDLFAGPGGLCEGFSSIFDETGARRFAVKVSIEKDPVAHRTLLLRAIFRKFAKGKVPDC 68 Query: 50 --TLIFGDIAKIKTQDIPDH-D------------------------------------VL 70 + G+I + + PD D VL Sbjct: 69 YYEYLRGNITREQFFAHPDIKDAAEHAAKEAKCAELGLTPHAEIDSWISEALGDKTDWVL 128 Query: 71 LAGFPCQPFSQAG 83 + G PCQ +S AG Sbjct: 129 IGGPPCQAYSLAG 141 >gi|240280401|gb|EER43905.1| C-5 cytosine methyltransferase DmtA [Ajellomyces capsulatus H143] Length = 651 Score = 52.8 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 D FCG GG+ Q N + + + ++ +++ NF + + D+A Sbjct: 324 YTFGDGFCGAGGVSRGALQAGLRLN----WGFDHSVSAMDSFRLNFETAIGYTSDVADFL 379 Query: 61 TQ---DIPDHDVLLAGFPCQPFSQA 82 +I D+L PCQ FS A Sbjct: 380 ASSHTEI-MVDILHFSPPCQTFSPA 403 >gi|225561042|gb|EEH09323.1| C-5 cytosine methyltransferase DmtA [Ajellomyces capsulatus G186AR] Length = 650 Score = 52.8 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 D FCG GG+ Q N + + + ++ +++ NF + + D+A Sbjct: 323 YTFGDGFCGAGGVSRGALQAGLRLN----WGFDHSVSAMDSFRLNFETAIGYTSDVADFL 378 Query: 61 TQ---DIPDHDVLLAGFPCQPFSQA 82 +I D+L PCQ FS A Sbjct: 379 ASSHTEI-MVDILHFSPPCQTFSPA 402 >gi|224137126|ref|XP_002327031.1| DNA methyltransferase [Populus trichocarpa] gi|222835346|gb|EEE73781.1| DNA methyltransferase [Populus trichocarpa] Length = 245 Score = 52.8 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 15/86 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------PNTLIFGDIA 57 + LF GIGG + L + ++ S EI+ + + N + DI Sbjct: 125 MCSLFSGIGGAEVALHRLG--IPLKNVVSVEISVSKRDVIRNWWEQANQKGNLIEITDIQ 182 Query: 58 KIKTQDIP-------DHDVLLAGFPC 76 I DI D+++ G PC Sbjct: 183 TINGSDIETWIRSFGGFDLVIGGSPC 208 >gi|242041781|ref|XP_002468285.1| hypothetical protein SORBIDRAFT_01g043010 [Sorghum bicolor] gi|241922139|gb|EER95283.1| hypothetical protein SORBIDRAFT_01g043010 [Sorghum bicolor] Length = 576 Score = 52.8 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + ++ S EI+ + + + T + D+ Sbjct: 453 MNVLSLFSGIGGAEVALHRL--DIRMKTVVSVEISETNRFVLRTWWNQTQTGTLIEITDV 510 Query: 57 AKIKTQ-------DIPDHDVLLAGFPC 76 + T+ I D+++ G PC Sbjct: 511 QSLTTERLESCIRRIGGFDLVIGGSPC 537 >gi|313158881|gb|EFR58260.1| C-5 cytosine-specific DNA methylase [Alistipes sp. HGB5] Length = 582 Score = 52.8 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 15/94 (15%) Query: 4 ITDLFCGIGGIRLD--LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLFCG GG L + + + ++ ++ AN P+ L + DI ++ Sbjct: 11 YIDLFCGAGGTSTGVHLARHGGDPCAKVIACVNHDANAIASHAANHPDALHYTEDIRTLE 70 Query: 61 T-----------QDIPD-HDVLLAGFPCQPFSQA 82 + PD VL A C FS+A Sbjct: 71 LGPLAAHAARMRRQYPDAFVVLWASLECTNFSRA 104 >gi|163737542|ref|ZP_02144959.1| DNA-cytosine methyltransferase [Phaeobacter gallaeciensis BS107] gi|161389068|gb|EDQ13420.1| DNA-cytosine methyltransferase [Phaeobacter gallaeciensis BS107] Length = 570 Score = 52.8 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 21/91 (23%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT------YQ----ANFPNTLIFGDIA 57 GIG E + F+SEI + Y+ N + L++ D+ Sbjct: 7 CSGIG----APELAAPWVDWR--FASEIEGFPRAVLADRFGYRLPEDHNQGDPLLWSDMT 60 Query: 58 KIKTQDIPDH-----DVLLAGFPCQPFSQAG 83 +I + D D+++AG PCQ FS AG Sbjct: 61 EITPDLLRDRGVPLPDLVVAGTPCQAFSVAG 91 >gi|294644820|ref|ZP_06722563.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CC 2a] gi|292639853|gb|EFF58128.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CC 2a] Length = 487 Score = 52.8 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 15/94 (15%) Query: 4 ITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLFCG GG +E + + + ++ ++ AN P+ L F DI ++ Sbjct: 8 YIDLFCGAGGTSTGVESARIDGKQCAKVIACVNHDANAIASHAANHPDALHFTEDIRTLE 67 Query: 61 TQDIPDH------------DVLLAGFPCQPFSQA 82 + +H VL A C FS+A Sbjct: 68 LSPLIEHLAKCKAQYPGAAVVLWASLECTNFSKA 101 >gi|21225136|ref|NP_630915.1| DNA methylase [Streptomyces coelicolor A3(2)] gi|6900913|emb|CAB71857.1| putative DNA methylase [Streptomyces coelicolor A3(2)] Length = 423 Score = 52.8 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 7/81 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 I DLF G GG + + + E + ++ KT +A I D+A+ Sbjct: 2 ILDLFAGPGGWS----RAVHVLGMRDIGL-EWDQWACKT-RAAAGQLTIRCDVARYPAWP 55 Query: 64 -IPDHDVLLAGFPCQPFSQAG 83 I ++A PCQ +S AG Sbjct: 56 FIGRTRGVIASPPCQAWSMAG 76 >gi|297737359|emb|CBI26560.3| unnamed protein product [Vitis vinifera] Length = 847 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + D++ G GG+ L V+ ++ +IN + ++ + N P T I Sbjct: 280 LLDIYSGCGGMSTGLCLGAKLSGVDLVTRWALDINKSACESLKLNHPETQ----IRNESA 335 Query: 62 QDIPD 66 +D D Sbjct: 336 EDFLD 340 Score = 37.0 bits (86), Expect = 0.79, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 454 DADVICGGPPCQGIS 468 >gi|225454840|ref|XP_002274960.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1143 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + D++ G GG+ L V+ ++ +IN + ++ + N P T I Sbjct: 576 LLDIYSGCGGMSTGLCLGAKLSGVDLVTRWALDINKSACESLKLNHPETQ----IRNESA 631 Query: 62 QDIPD 66 +D D Sbjct: 632 EDFLD 636 Score = 37.0 bits (86), Expect = 0.79, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 750 DADVICGGPPCQGIS 764 >gi|326794216|ref|YP_004312036.1| DNA-cytosine methyltransferase [Marinomonas mediterranea MMB-1] gi|326544980|gb|ADZ90200.1| DNA-cytosine methyltransferase [Marinomonas mediterranea MMB-1] Length = 383 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 33/101 (32%), Gaps = 25/101 (24%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA-----NFPN---TLIFGD 55 I F G+G + L E++ + F +E Y+ N P G Sbjct: 18 IFSFFAGVGFLDLGFERS----GFDIRFVNEFYKPFYDAYKYSRQKMNQPEPLYEHHLGS 73 Query: 56 IAKI--KTQDIP--------DHDVL---LAGFPCQPFSQAG 83 I + Q I D L + G PC FS AG Sbjct: 74 IDEFLAGPQKIRLKQYLIDAKKDGLVGFIGGPPCPDFSVAG 114 >gi|255579031|ref|XP_002530367.1| protein with unknown function [Ricinus communis] gi|223530114|gb|EEF32028.1| protein with unknown function [Ricinus communis] Length = 845 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G G + L + V+ ++ +IN ++ K+ + N P T + Sbjct: 277 LLDLYSGCGAMSTGLCMGASLSGVKLVTKWAVDINAFACKSLKTNHPETEVRN 329 Score = 35.1 bits (81), Expect = 3.4, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 8/15 (53%) Query: 66 DHDVLLAGFPCQPFS 80 D D + G PCQ S Sbjct: 460 DADFICGGPPCQGIS 474 >gi|37039880|gb|AAM96952.1| DNA cytosine-5-methyltransferase [Prunus persica] Length = 1564 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L Q+ ++ E + ++ N P +L+F Sbjct: 1127 LDIFAGCGGLSNGLRQSGASI---TKWAIEYEEPAGDAFKLNHPESLVFINNCNVILRAV 1183 Query: 54 ----GD----IAKIKT------------QDIP---DHDVLLAGFPCQPFS 80 GD IA + D+P D + G PC+ FS Sbjct: 1184 MEKCGDTDDCIATSEAAELAASLDEEVKNDLPLPGQVDFINGGPPCRGFS 1233 >gi|303278772|ref|XP_003058679.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459839|gb|EEH57134.1| predicted protein [Micromonas pusilla CCMP1545] Length = 493 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 4/57 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV----ECFFSSEINPYSVKTYQANFPNTLIFG 54 LK+ + F G GG+ + + T V E + +I + TY NFP + Sbjct: 223 LKVLETFAGAGGLHMHGDATHGPSGVAVALESVAAIDIVKDACDTYSHNFPGVNVMH 279 Score = 33.6 bits (77), Expect = 8.3, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D V+ G PCQ +S Sbjct: 451 DVHVVTGGPPCQGWS 465 >gi|237716196|ref|ZP_04546677.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. D1] gi|262407805|ref|ZP_06084353.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 2_1_22] gi|294807624|ref|ZP_06766417.1| C-5 cytosine-specific DNA methylase [Bacteroides xylanisolvens SD CC 1b] gi|229443843|gb|EEO49634.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. D1] gi|262354613|gb|EEZ03705.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 2_1_22] gi|294445060|gb|EFG13734.1| C-5 cytosine-specific DNA methylase [Bacteroides xylanisolvens SD CC 1b] Length = 561 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 15/94 (15%) Query: 4 ITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLFCG GG +E + + + ++ ++ AN P+ L F DI ++ Sbjct: 8 YIDLFCGAGGTSTGVESARIDGKQCAKVIACVNHDANAIASHAANHPDALHFTEDIRTLE 67 Query: 61 TQDIPDH------------DVLLAGFPCQPFSQA 82 + +H VL A C FS+A Sbjct: 68 LSPLIEHLAKCKAQYPGAAVVLWASLECTNFSKA 101 >gi|330960676|gb|EGH60936.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 351 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG GG+ L +T + +I+ Y+ N I + K +D+ Sbjct: 7 VDLFCGAGGLTAGLLKT----GISVRAGYDIDRNCEYAYRENNGAEFIAESVELTKIEDL 62 Query: 65 P------DHDVLLAGFPCQPFS 80 +L PCQPFS Sbjct: 63 SAWYRPQRIKLLAGCAPCQPFS 84 >gi|297686112|ref|XP_002820609.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Pongo abelii] Length = 63 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53 L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLL 53 >gi|221044562|dbj|BAH13958.1| unnamed protein product [Homo sapiens] Length = 254 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53 L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLL 53 >gi|167887561|gb|ACA05985.1| tRNA aspartic acid methyltransferase 1 variant 7 [Homo sapiens] Length = 63 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53 L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLL 53 >gi|31874014|emb|CAD97925.1| hypothetical protein [Homo sapiens] gi|167887557|gb|ACA05981.1| tRNA aspartic acid methyltransferase 1 variant 8 [Homo sapiens] Length = 69 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53 L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLL 53 >gi|167887558|gb|ACA05982.1| tRNA aspartic acid methyltransferase 1 variant 5 [Homo sapiens] Length = 117 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53 L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLL 53 >gi|325096531|gb|EGC49841.1| C-5 cytosine methyltransferase DmtA [Ajellomyces capsulatus H88] Length = 651 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 D FCG GG+ Q N + + + ++ +++ NF + + D+A Sbjct: 324 YTFGDGFCGAGGVSRGALQAGLRLN----WGFDHSISAMDSFRLNFETAIGYTSDVADFL 379 Query: 61 TQ---DIPDHDVLLAGFPCQPFSQA 82 +I D+L PCQ FS A Sbjct: 380 ASSHTEI-MVDILHFSPPCQTFSPA 403 >gi|2865425|gb|AAC02665.1| chromomethylase [Arabidopsis thaliana] gi|2865430|gb|AAC02668.1| chromomethylase [Arabidopsis thaliana] Length = 560 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G G + + V+ +S +IN ++ + + N P T + Sbjct: 227 LLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRN 279 >gi|2865420|gb|AAC02662.1| chromomethylase [Arabidopsis thaliana] Length = 754 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G G + + V+ +S +IN ++ + + N P T + Sbjct: 227 LLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRN 279 >gi|2865422|gb|AAC02663.1| chromomethylase [Arabidopsis thaliana] Length = 791 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G G + + V+ +S +IN ++ + + N P T + Sbjct: 227 LLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRN 279 >gi|2865433|gb|AAC02670.1| chromomethylase [Arabidopsis suecica] Length = 754 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G G + + V+ +S +IN ++ + + N P T + Sbjct: 227 LLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRN 279 >gi|2865428|gb|AAC02667.1| chromomethylase [Arabidopsis thaliana] Length = 560 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G G + + V+ +S +IN ++ + + N P T + Sbjct: 227 LLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRN 279 >gi|18412893|ref|NP_565245.1| CMT1 (CHROMOMETHYLASE 1); DNA binding / chromatin binding [Arabidopsis thaliana] gi|110832797|sp|O49139|CMT1_ARATH RecName: Full=Putative DNA (cytosine-5)-methyltransferase CMT1; AltName: Full=Chromomethylase 1; AltName: Full=Protein CHROMOMETHYLASE 1 gi|6503286|gb|AAF14662.1|AC011713_10 Identical to gb|AF039367 ecotype Col-0 chromomethylase (CMT1) gene from Arabidopsis thaliana gi|2865416|gb|AAC02660.1| chromomethylase [Arabidopsis thaliana] gi|332198321|gb|AEE36442.1| putative DNA (cytosine-5)-methyltransferase CMT1 [Arabidopsis thaliana] Length = 791 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G G + + V+ +S +IN ++ + + N P T + Sbjct: 227 LLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRN 279 >gi|2766713|gb|AAB95485.1| chromomethylase [Arabidopsis thaliana] gi|2865414|gb|AAC02659.1| chromomethylase [Arabidopsis thaliana] Length = 791 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G G + + V+ +S +IN ++ + + N P T + Sbjct: 227 LLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRN 279 >gi|257419811|ref|ZP_05596805.1| site-specific DNA methylase [Enterococcus faecalis T11] gi|257161639|gb|EEU91599.1| site-specific DNA methylase [Enterococcus faecalis T11] Length = 380 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 8/73 (10%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANF---PN--TLIFGDIAKIKTQD---IPDHDVL 70 +Q +++E + +V+TY+ N P+ ++ D+ + + D D L Sbjct: 26 DQHNEEWGFVHAWANEYDSDTVETYKLNILKDPDATSVYCQDVRTFDLHNHELLGDIDAL 85 Query: 71 LAGFPCQPFSQAG 83 + GFPC +S G Sbjct: 86 IFGFPCNDYSLVG 98 >gi|32455595|ref|NP_862078.1| putative modification methylase [Streptomyces lividans] gi|28883246|gb|AAO61179.1| putative modification methylase [Streptomyces lividans] Length = 426 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 33/92 (35%), Gaps = 15/92 (16%) Query: 1 MLK------ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT--YQANFPN-TL 51 M + TDLFCG+GG L + N +V+ ++ N P Sbjct: 1 MFRHDGDLDFTDLFCGLGGSTRGLTEAGMRA--RLVM----NHDAVQVAAHRLNHPECEH 54 Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + DI + +P +L C S AG Sbjct: 55 LVEDINAFDKRSLPRTRILWGSPICTEISPAG 86 >gi|164470590|gb|ABY58121.1| putative DNA cytosine 5-methyltransferase [Solanum lycopersicum] Length = 602 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 11/86 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTF-NHRNVECFFSSEINPYSVKTY--QAN-FPNTLIFGDIA 57 + + LF GIGG + L + NV SE+N V+++ Q N N + F D+ Sbjct: 477 MNVLSLFSGIGGAEVALYRLGIQLNNVVSVEKSEVNRNIVRSWWEQTNQRGNLIDFDDVQ 536 Query: 58 KIKTQDIPD-------HDVLLAGFPC 76 ++ + D+L+ G PC Sbjct: 537 QLNGDRLEQLIDSCGGFDLLIGGSPC 562 >gi|301385608|ref|ZP_07234026.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato Max13] gi|302061458|ref|ZP_07252999.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato K40] gi|330878700|gb|EGH12849.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 351 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG GG+ L +T + +I+ Y+ N I + K +D+ Sbjct: 7 VDLFCGAGGLTAGLLKT----GISVRAGYDIDHNCEYAYRENNGAEFITESVELTKIEDL 62 Query: 65 P------DHDVLLAGFPCQPFS 80 +L PCQPFS Sbjct: 63 SAWYRPQRIKLLAGCAPCQPFS 84 >gi|170719866|ref|YP_001747554.1| C-5 cytosine-specific DNA methylase [Pseudomonas putida W619] gi|169757869|gb|ACA71185.1| C-5 cytosine-specific DNA methylase [Pseudomonas putida W619] Length = 350 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 10/82 (12%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 DLFCG GG+ L +T + +I+ Y+ N + + K +D+ Sbjct: 7 VDLFCGAGGLTAGLLKT----GISVRAGYDIDRNCEYAYKTNNGAEFVAESVESAKVRDV 62 Query: 65 --PDHD----VLLAGFPCQPFS 80 D +L PCQPFS Sbjct: 63 AAWYRDGRVKLLAGCAPCQPFS 84 >gi|265756302|ref|ZP_06090631.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263233893|gb|EEZ19502.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 589 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 15/94 (15%) Query: 4 ITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 + DLFCG GG+ +E+ +R + + ++ ++ AN P+ L F DI ++ Sbjct: 1 MIDLFCGAGGLSEGVEEARLDGNRCAKVVCCVNHDKNAILSHDANIPDALHFIEDIRTLE 60 Query: 61 TQDI-----------PDHDVLL-AGFPCQPFSQA 82 I PD ++L A C FS+A Sbjct: 61 LSPISTIVERIRQLYPDAMIMLHASLECTNFSKA 94 >gi|50365120|ref|YP_053545.1| deoxycytosine methylase [Mesoplasma florum L1] gi|50363676|gb|AAT75661.1| deoxycytosine methylase [Mesoplasma florum L1] Length = 455 Score = 52.5 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 39/140 (27%), Gaps = 58/140 (41%) Query: 2 LKITDLFCGIGGIRLDLE--QTFNHRNVECFFSSEINPYSVKTYQANF------------ 47 +K+ + F GIG L+ + N+ N E +SE + ++ Y A Sbjct: 4 IKVFETFSGIGAQHKALDILKQNNYINYEVVGTSEWDIWANIAYNAIHNKNIDHTKNISE 63 Query: 48 ----------------------------------------PNTLIFGDIAKIKTQDIP-- 65 N+ G I + I Sbjct: 64 KEINDFLIKFTHSRDSKTPLTNEQVIKLPIIIKQNLYNSIKNSNNLGSIVGVTGNMISSQ 123 Query: 66 --DHDVLLAGFPCQPFSQAG 83 D+L FPCQ S AG Sbjct: 124 VGKIDLLTYSFPCQDLSTAG 143 >gi|240280627|gb|EER44131.1| DNA methyltransferase [Ajellomyces capsulatus H143] gi|325089115|gb|EGC42425.1| DNA methyltransferase [Ajellomyces capsulatus H88] Length = 1234 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 20/96 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L+ ++F G G L++ +E ++ E + + TY+AN N L G + Sbjct: 660 LRALNIFSGGGSFDRGLQEGGA---IENKWAVEWSHVPMLTYRANHDNPEKIHLFLGSVN 716 Query: 58 KIKTQ-------------DIPDHDVLLAGFPCQPFS 80 Q + D + AG PCQ +S Sbjct: 717 DFLLQALQGEAKASNLVAKLGDVGFISAGSPCQGYS 752 >gi|226088548|dbj|BAH37019.1| chromomethylase OsMET2a [Oryza sativa Japonica Group] Length = 907 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 3 KITDLFCGIGGIRLDL--EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G GG+ L N+E ++ + N ++ ++ + N P T + Sbjct: 336 TLLDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVRN 389 Score = 37.4 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 503 DVDVICGGPPCQGIS 517 >gi|225560828|gb|EEH09109.1| DNA methyltransferase Dim-2 [Ajellomyces capsulatus G186AR] Length = 1236 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 20/96 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L+ ++F G G L++ +E ++ E + + TY+AN N L G + Sbjct: 660 LRALNIFSGGGSFDRGLQEGGA---IENKWAVEWSHVPMLTYRANHDNPEKIHLFLGSVN 716 Query: 58 KIKTQ-------------DIPDHDVLLAGFPCQPFS 80 Q + D + AG PCQ +S Sbjct: 717 DFLLQALQGEAKASNLVAKLGDVGFISAGSPCQGYS 752 >gi|222612319|gb|EEE50451.1| hypothetical protein OsJ_30466 [Oryza sativa Japonica Group] Length = 907 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 3 KITDLFCGIGGIRLDL--EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G GG+ L N+E ++ + N ++ ++ + N P T + Sbjct: 336 TLLDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVRN 389 Score = 37.4 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 503 DVDVICGGPPCQGIS 517 >gi|218188370|gb|EEC70797.1| hypothetical protein OsI_02246 [Oryza sativa Indica Group] Length = 907 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 3 KITDLFCGIGGIRLDL--EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G GG+ L N+E ++ + N ++ ++ + N P T + Sbjct: 336 TLLDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVRN 389 Score = 37.4 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 503 DVDVICGGPPCQGIS 517 >gi|147903096|ref|NP_001079673.1| tRNA aspartic acid methyltransferase 1 [Xenopus laevis] gi|111185513|gb|AAH46854.2| MGC53207 protein [Xenopus laevis] Length = 382 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Query: 36 NPYSVKTYQANFPNTLIF-GDIAKIKTQDIP--DHDVLLAGFPCQPFSQAG 83 N + K Y+ NFP+T ++ I I +++ D++L PCQPF++ G Sbjct: 21 NTNANKVYKYNFPHTPLWPKTIEGITLKELDALSFDMILMSPPCQPFTRIG 71 >gi|18542936|gb|AAL75761.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa Japonica Group] Length = 719 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 3 KITDLFCGIGGIRLDL--EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G GG+ L N+E ++ + N ++ ++ + N P T + Sbjct: 314 TLLDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVRN 367 Score = 37.4 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 481 DVDVICGGPPCQGIS 495 >gi|163848465|ref|YP_001636509.1| C-5 cytosine-specific DNA methylase [Chloroflexus aurantiacus J-10-fl] gi|222526394|ref|YP_002570865.1| C-5 cytosine-specific DNA methylase [Chloroflexus sp. Y-400-fl] gi|163669754|gb|ABY36120.1| C-5 cytosine-specific DNA methylase [Chloroflexus aurantiacus J-10-fl] gi|222450273|gb|ACM54539.1| C-5 cytosine-specific DNA methylase [Chloroflexus sp. Y-400-fl] Length = 322 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 16/91 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFG-DIAK 58 ++ DLFCGIGG ++ + +++ + +Q NFP + D+A Sbjct: 4 IRAIDLFCGIGGNSCGARAAGIDI------AAGFDKWALAGQVFQDNFPEARFYNVDLAI 57 Query: 59 IKT-------QDIPDHDVLLAGFPCQPFSQA 82 + + I D++LA C S A Sbjct: 58 LSRRQIHHFHETIGHVDLILASPECTSHSVA 88 >gi|147801053|emb|CAN77849.1| hypothetical protein VITISV_020833 [Vitis vinifera] Length = 631 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + D++ G GG+ L V+ ++ +IN + ++ + N P T I Sbjct: 532 LLDIYSGCGGMSTGLCLGAKLSGVDLVTRWALDINKSACESLKLNHPETQ----IRNESA 587 Query: 62 QDIPD 66 +D D Sbjct: 588 EDFLD 592 >gi|281338132|gb|EFB13716.1| hypothetical protein PANDA_007177 [Ailuropoda melanoleuca] Length = 372 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 7/60 (11%) Query: 29 CFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHD-----VLLAGFPCQPFSQAG 83 + ++N + + Y+ NFP+T + I+ + + D +L PCQPF++ G Sbjct: 10 VVAAIDVNTVANEVYKYNFPHTQLLA--KTIEGITLEEFDKLSFNTILMSPPCQPFTRIG 67 >gi|221067872|ref|ZP_03543977.1| Site-specific DNA methylase-like protein [Comamonas testosteroni KF-1] gi|220712895|gb|EED68263.1| Site-specific DNA methylase-like protein [Comamonas testosteroni KF-1] Length = 193 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIF-GDIAK 58 + DLF G GG +EQ +I +P +V + AN P T F D+ + Sbjct: 15 VVDLFAGGGGASTGIEQAIGR-------HVDIAVNHDPEAVSLHTANHPPTRHFCSDVFE 67 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQA 82 + + D +L A C+ FS+A Sbjct: 68 VDPLAVTDGQPVGLLWASPDCKHFSKA 94 >gi|54026007|ref|YP_120249.1| hypothetical protein nfa40370 [Nocardia farcinica IFM 10152] gi|54017515|dbj|BAD58885.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 592 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 15/87 (17%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59 DLF G GG+ +E ++ Y V+ ++AN P+ + IA + Sbjct: 24 VDLFSGFGGLTQGIELA----GFTTIMAANHRRYKVEVHEANHPHAEHW--IADLVDPES 77 Query: 60 ----KTQDIPDHDVLLAGFPCQPFSQA 82 +D+P D+L+AG C SQA Sbjct: 78 ADYHSARDLPAADLLVAGVSCVNHSQA 104 >gi|296393765|ref|YP_003658649.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985] gi|296180912|gb|ADG97818.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985] Length = 393 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 9/62 (14%) Query: 31 FSSEINPYSVKTYQAN--------FPNTLIFGDIAKIKTQ-DIPDHDVLLAGFPCQPFSQ 81 F+ E + ++ T N ++ GD+ + D++ G PCQPFS Sbjct: 28 FAVERDRWACDTLMQNAASGYPLVRGLKVLRGDVRSVDWSLSSGQVDLVAGGPPCQPFSL 87 Query: 82 AG 83 G Sbjct: 88 GG 89 >gi|15644685|ref|NP_206855.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori 26695] gi|2313132|gb|AAD07124.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori 26695] Length = 823 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 22/99 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57 L LF G G L EC ++EI + + N + I GDI Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEILEKRLNIQRINRKCKLDESYISGDIK 62 Query: 58 KIKTQD-----IP---------DHDVLLAGFPCQPFSQA 82 K +T++ I D+++A PCQ S A Sbjct: 63 KPETKEKILKQIEFYSKKFGNDRVDLVVATPPCQGMSVA 101 >gi|302763491|ref|XP_002965167.1| hypothetical protein SELMODRAFT_83383 [Selaginella moellendorffii] gi|300167400|gb|EFJ34005.1| hypothetical protein SELMODRAFT_83383 [Selaginella moellendorffii] Length = 338 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 31/88 (35%), Gaps = 15/88 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------PNTLIFGD 55 +++ LF GIGG + L + E N + + + + I D Sbjct: 216 IRMLSLFSGIGGAEVALHRAGIKLKF--VVCVESNVDNRRILERWWSTSGQTGQHRILDD 273 Query: 56 IAKIK-------TQDIPDHDVLLAGFPC 76 + + ++ D+++ G PC Sbjct: 274 VQDLTMAVVARLMEESGGFDLVIGGSPC 301 >gi|1297185|gb|AAA98912.1| theoretical protein with similarity to Swiss-Prot Accession Number P34881 DNA (cytosine-5-) methyltransferase [Arabidopsis thaliana] Length = 620 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G G + + V+ +S +IN ++ + + N P T + Sbjct: 145 LLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRN 197 >gi|115470907|ref|NP_001059052.1| Os07g0182900 [Oryza sativa Japonica Group] gi|113610588|dbj|BAF20966.1| Os07g0182900 [Oryza sativa Japonica Group] Length = 445 Score = 52.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 33/110 (30%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 D+F G GG+ L+Q ++ E + + + N P +F D + + I Sbjct: 12 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 68 Query: 65 PD----------------------------------HDVLLAGFPCQPFS 80 D + + G PCQ FS Sbjct: 69 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFS 118 >gi|309776146|ref|ZP_07671137.1| CPG DNA methylase [Erysipelotrichaceae bacterium 3_1_53] gi|308916097|gb|EFP61846.1| CPG DNA methylase [Erysipelotrichaceae bacterium 3_1_53] Length = 456 Score = 52.1 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 43/134 (32%), Gaps = 56/134 (41%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------------FPN-- 49 + + F G+G LE+ + + SEI+ ++ +Y A FP Sbjct: 21 VFETFAGVGAQAKSLERL--NVSHVITGISEIDKDAILSYAAIHCGLNDKVDSYVFPERE 78 Query: 50 ----------------------------------------TLIFGDIAKIKTQDIPDHDV 69 + G+I+ I D+P+ D+ Sbjct: 79 TMIRALQEMDVGFDFKNDRHTITEKTRPAILKKYYLANILSGNLGNISHIHAADLPEVDL 138 Query: 70 LLAGFPCQPFSQAG 83 L FPCQ S+AG Sbjct: 139 LTYSFPCQDLSKAG 152 >gi|119383017|ref|YP_914073.1| DNA-cytosine methyltransferase [Paracoccus denitrificans PD1222] gi|119372784|gb|ABL68377.1| DNA-cytosine methyltransferase [Paracoccus denitrificans PD1222] Length = 555 Score = 52.1 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 33/121 (27%), Gaps = 45/121 (37%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----------PNT- 50 L + GI + + SEI P+ F P+ Sbjct: 4 LSFLSVCSGI----EAASLAWEPLGWKAIGYSEIEPFPCHVLHHRFGAGRPIFMPAPDEA 59 Query: 51 --------------------------LIFGDIAKIKTQDIPD--HDVLLAGFPCQPFSQA 82 FGD+ + PD DVL+ G PCQ +S A Sbjct: 60 GLSAKDRKARAAAIRAVAKLPEVGRVPNFGDMTQFDR--WPDAAFDVLVGGTPCQDYSVA 117 Query: 83 G 83 G Sbjct: 118 G 118 >gi|4894862|gb|AAD32631.1|AF135438_1 de novo DNA methyltransferase 3 [Danio rerio] Length = 842 Score = 52.1 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 16/89 (17%) Query: 2 LKITDLFCGI--GGI---RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD- 55 +++ LF GI G + L + VE + +SEI+ S+ N + D Sbjct: 558 IRVLSLFDGIATGYLVLRDLGFK-------VEKYVASEIDEESITISMVNHDGKITQVDD 610 Query: 56 ---IAKIKTQDIPDHDVLLAGFPCQPFSQ 81 I K + D+L+ G PC S Sbjct: 611 VKNITKKHMEQWGPFDLLIGGSPCNDLSI 639 >gi|154322765|ref|XP_001560697.1| hypothetical protein BC1G_00725 [Botryotinia fuckeliana B05.10] gi|150848059|gb|EDN23252.1| hypothetical protein BC1G_00725 [Botryotinia fuckeliana B05.10] Length = 861 Score = 52.1 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 17/88 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 D +CG GG+ ++ + + N ++ +T+Q NFP + Sbjct: 546 YTYGDGYCGAGGMTRGAATA----GLKVKWGFDFNAHAGETWQKNFPGATFH----LLPV 597 Query: 62 QDI---PD------HDVLLAGFPCQPFS 80 + PD D+L PCQ FS Sbjct: 598 NEFAALPDPRKRLWIDILHLSPPCQVFS 625 >gi|134288503|ref|YP_001110666.1| C-5 cytosine-specific DNA methylase [Burkholderia vietnamiensis G4] gi|134133153|gb|ABO59863.1| C-5 cytosine-specific DNA methylase [Burkholderia vietnamiensis G4] Length = 586 Score = 52.1 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 I DLF G GG+ +E S+ ++ ++AN P T F D+ ++ + Sbjct: 28 IIDLFSGGGGMSTAIEWALGRSPHIAVNHSD---DALSMHRANHPQTKHFIADVREVCPK 84 Query: 63 DIPD---HDVLLAGFPCQPFSQA 82 ++ + +L A C SQA Sbjct: 85 EVTEGRPVGLLHASPDCTHHSQA 107 >gi|162463785|ref|NP_001104978.1| DNA (cytosine-5)-methyltransferase 1 [Zea mays] gi|75168496|sp|Q9AXT8|CMT1_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName: Full=Chromomethylase 1; AltName: Full=DNA cytosine methyltransferase MET2a; AltName: Full=Zea methyltransferase2; Short=Zmet2 gi|13021690|gb|AAK11516.1|AF243043_1 DNA cytosine methyltransferase MET2a [Zea mays] gi|260749135|gb|ACX48824.1| chromomethylase [Zea mays] Length = 912 Score = 52.1 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 3 KITDLFCGIGGIRLDL--EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G GG+ L + +E ++ + N ++ ++ + N P T + Sbjct: 342 TLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQTEVRN 395 Score = 37.4 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 507 DVDVICGGPPCQGIS 521 >gi|242217704|ref|XP_002474649.1| predicted protein [Postia placenta Mad-698-R] gi|220726179|gb|EED80137.1| predicted protein [Postia placenta Mad-698-R] Length = 1157 Score = 52.1 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 31/108 (28%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 LK D F G+G L LE++ ++ + EI+P + + Q N P+T+++ + + Sbjct: 682 LKAFDPFGGVGAFGLGLEESGC---LKVVQTIEISPSAAQALQENCPHTMVYNQCSNVVL 738 Query: 62 Q----------------------DIPD------HDVLLAGFPCQPFSQ 81 Q +PD D ++AGFPCQP SQ Sbjct: 739 QYAIKNHAGHKPQVPRAIGNGQRALPDPPTPGQIDCIIAGFPCQPHSQ 786 >gi|68655470|emb|CAJ01708.1| chromomethylase 1 [Hordeum vulgare subsp. vulgare] Length = 735 Score = 51.7 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 6/63 (9%) Query: 4 ITDLFCGIGGIRLDL--EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DL+ G GG+ L +E ++ ++N ++ K+ + N P T + K Sbjct: 166 LLDLYSGCGGMSTGLCLGSALAGLKLETKWAVDLNSFACKSLKYNHPKTE----VRNEKA 221 Query: 62 QDI 64 +D Sbjct: 222 EDF 224 Score = 35.5 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 8/14 (57%) Query: 67 HDVLLAGFPCQPFS 80 DV+ G PCQ S Sbjct: 331 VDVICGGPPCQGIS 344 >gi|226293429|gb|EEH48849.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb18] Length = 1311 Score = 51.7 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 20/96 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L+ +LF G G LE+ RN ++ E + TY+AN + L G + Sbjct: 735 LRALNLFSGGGSFDRGLEEGGAIRNE---WAVEWELAPMLTYRANQHDPERVKLFLGSVN 791 Query: 58 KI-------KTQD------IPDHDVLLAGFPCQPFS 80 K++D + D + + AG PCQ +S Sbjct: 792 DFLLRAFQGKSEDNNLVAKLGDVEFISAGSPCQGYS 827 >gi|233770214|gb|ACQ91180.1| DRM-type cytosine DNA-methyltransferase [Fragaria x ananassa] gi|233770218|gb|ACQ91182.1| DRM-type cytosine DNA-methyltransferase [Fragaria x ananassa] Length = 596 Score = 51.7 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 15/88 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55 + + LF GIGG + L + ++ S EI+ S + + T G D Sbjct: 471 INLLSLFSGIGGAEIALHRLGIR--MKNVVSVEISAVSRTVVRTWWEQTNQKGNLYHLAD 528 Query: 56 IAKIKTQ-------DIPDHDVLLAGFPC 76 + ++ D+++ G PC Sbjct: 529 VQELNADRLEHYINTFGGFDLVVGGSPC 556 >gi|213156207|ref|YP_002318627.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii AB0057] gi|301346662|ref|ZP_07227403.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii AB056] gi|301596880|ref|ZP_07241888.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii AB059] gi|332852721|ref|ZP_08434355.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii 6013150] gi|332871075|ref|ZP_08439688.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii 6013113] gi|213055367|gb|ACJ40269.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii AB0057] gi|332729074|gb|EGJ60422.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii 6013150] gi|332731835|gb|EGJ63115.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii 6013113] Length = 492 Score = 51.7 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG-DIAK 58 I D F G GG LE+ F +I +P ++ ++AN PNT F D+ Sbjct: 15 IVDNFAGGGGTSTGLEKAFGRP-------VDIAINHDPKAIAMHRANHPNTRHFCEDVWD 67 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQA 82 + + + ++ C+ FS+A Sbjct: 68 VDPVKVTNNQPVGLVWLSPDCKHFSKA 94 >gi|126293841|ref|XP_001362485.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase 3 beta [Monodelphis domestica] Length = 756 Score = 51.7 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ + +SEI S+ ++ N +I Sbjct: 478 IRVLSLFDGIATGYLVLKELGIKVDKYI--ASEICEDSIAVGTVKHEGNIKYVHDVRNIT 535 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K + + D+L+ G PC S Sbjct: 536 KRQIDEWGPFDLLIGGSPCNDLS 558 >gi|315222621|ref|ZP_07864510.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211] gi|315188307|gb|EFU22033.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211] Length = 417 Score = 51.7 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 42/128 (32%), Gaps = 48/128 (37%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY----------QAN---- 46 ML I D+F G GG+ + ++ N C E++ + + + N Sbjct: 1 MLNIVDVFSGAGGLTEGF-RYKDYYNFIC--HIEMDKDACSSLELRNIYYYLKKENNLSP 57 Query: 47 -FP-----------NTLIFGDIAK------IKTQDIPDH-------------DVLLAGFP 75 F ++I D+ K I IP D ++ G P Sbjct: 58 YFEYIQGKISRDDLYSIIPRDLTKDILNKEISKDTIPSIFEFIDQRLGNNKLDGIIGGPP 117 Query: 76 CQPFSQAG 83 CQ +S G Sbjct: 118 CQAYSTIG 125 >gi|159041947|ref|YP_001541199.1| DNA-cytosine methyltransferase [Caldivirga maquilingensis IC-167] gi|157920782|gb|ABW02209.1| DNA-cytosine methyltransferase [Caldivirga maquilingensis IC-167] Length = 309 Score = 51.7 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 5/60 (8%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDI 64 DLF G GG + E +I+ SV+++ NFP + I D ++ DI Sbjct: 2 DLFSGAGGFSVGFRDA----GFEVVAGLDIDIDSVRSFSINFPKAVTIREDARLVRGSDI 57 >gi|283379280|dbj|BAI66066.1| DNA metyltransferase [Oryza sativa Japonica Group] Length = 189 Score = 51.7 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + ++ EI+ ++ ++ + T + D+ Sbjct: 74 MNVLSLFSGIGGAEVALHRLGIC--MKTVVLVEISEVNMTLLRSWWDQTQTGTLIEIADV 131 Query: 57 AKIKTQDIP-------DHDVLLAGFPC 76 + + I D+++ G PC Sbjct: 132 QNLTAERIELFIRRFGGFDLVIGGSPC 158 >gi|290999391|ref|XP_002682263.1| cytosine-5 DNA methyltransferase [Naegleria gruberi] gi|284095890|gb|EFC49519.1| cytosine-5 DNA methyltransferase [Naegleria gruberi] Length = 1527 Score = 51.7 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 4/52 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53 + D+F G GG+ L LE+ + +S E + T+ F + F Sbjct: 887 ITALDIFSGCGGLSLGLERA----GIHVKYSIEFWKPAADTHHYYFKDCHTF 934 Score = 35.9 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 3/25 (12%) Query: 60 KTQDIP---DHDVLLAGFPCQPFSQ 81 K +IP + D++ G PCQ FS Sbjct: 1019 KYANIPAPDEIDLIAGGPPCQGFSL 1043 >gi|154504856|ref|ZP_02041594.1| hypothetical protein RUMGNA_02366 [Ruminococcus gnavus ATCC 29149] gi|153794739|gb|EDN77159.1| hypothetical protein RUMGNA_02366 [Ruminococcus gnavus ATCC 29149] Length = 369 Score = 51.7 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 34/103 (33%), Gaps = 25/103 (24%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------F 53 LKI F G G + L E + F +E +P +K Y+ + + Sbjct: 7 LKIFSFFSGSGFLDLGFE----TNGFDIEFVNEFHPAFMKAYKYSREKMGLKSPTYGYFN 62 Query: 54 GDIAKIKTQDIPDHDVL-------------LAGFPCQPFSQAG 83 GD+ + D + G PC FS AG Sbjct: 63 GDVNEFLENKKDDMHSWMRDAQKDGSLIGFIGGPPCPDFSIAG 105 >gi|289657684|gb|ADD14583.1| DNA methyltransferase 3B [Anolis carolinensis] Length = 852 Score = 51.7 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L VE + +SEI S+ ++ N +I Sbjct: 574 IRVLSLFDGIATGYLVLRDLGIK--VEKYVASEICEESIAVGTVRHEGNITYVHDVRNIT 631 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81 K + D+++ G PC S Sbjct: 632 KRNIDEWGPFDLVIGGSPCNDLSI 655 >gi|313678987|ref|YP_004056726.1| c-5 cytosine-specific DNA methylase [Oceanithermus profundus DSM 14977] gi|313151702|gb|ADR35553.1| C-5 cytosine-specific DNA methylase [Oceanithermus profundus DSM 14977] Length = 322 Score = 51.7 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 12/85 (14%) Query: 2 LKITDLFCGIGGIRLDLEQ-TFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +++ DL+ G+GGI Q F+ + +INP S ++ N +I D+ + Sbjct: 1 MRVIDLYAGMGGISWGFSQEGFHVTGL------DINPLSPDIFELNGIGKVIVTDLRDYQ 54 Query: 61 TQDI-PDHD----VLLAGFPCQPFS 80 Q++ P VL+ G C+P+S Sbjct: 55 IQNLVPRVREEPLVLVGGPSCRPWS 79 >gi|323516968|gb|ADX91349.1| site-specific DNA methylase [Acinetobacter baumannii TCDC-AB0715] gi|323518452|gb|ADX92833.1| site-specific DNA methylase [Acinetobacter baumannii TCDC-AB0715] Length = 492 Score = 51.7 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG-DIAK 58 I D F G GG LE+ F +I +P ++ ++AN PNT F D+ Sbjct: 15 IVDNFAGGGGTSTGLEKAFGRP-------VDIAINHDPKAIAMHRANHPNTRHFCEDVWD 67 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQA 82 + + + ++ C+ FS+A Sbjct: 68 VDPVKVTNNQPVGLVWLSPDCKHFSKA 94 >gi|184158530|ref|YP_001846869.1| site-specific DNA methylase [Acinetobacter baumannii ACICU] gi|183210124|gb|ACC57522.1| Site-specific DNA methylase [Acinetobacter baumannii ACICU] Length = 492 Score = 51.7 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG-DIAK 58 I D F G GG LE+ F +I +P ++ ++AN PNT F D+ Sbjct: 15 IVDNFAGGGGTSTGLEKAFGRP-------VDIAINHDPKAIAMHRANHPNTRHFCEDVWD 67 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQA 82 + + + ++ C+ FS+A Sbjct: 68 VDPVKVTNNQPVGLVWLSPDCKHFSKA 94 >gi|308183853|ref|YP_003927986.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori SJM180] gi|308059773|gb|ADO01669.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori SJM180] Length = 822 Score = 51.7 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 35/99 (35%), Gaps = 22/99 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57 L LF G G EC ++EI + + N + I GDI Sbjct: 7 LTYISLFSGAGVGCYGF----LEEGFECIATNEILEKRLNIQRINRKCKLDESYISGDIK 62 Query: 58 KIKTQD-----IP---------DHDVLLAGFPCQPFSQA 82 K +T++ I D+++A PCQ S A Sbjct: 63 KPETKEKILKQIEFYSKKFGNDRVDLVVATPPCQGMSVA 101 >gi|260551407|ref|ZP_05825607.1| site-specific DNA methylase [Acinetobacter sp. RUH2624] gi|260405570|gb|EEW99062.1| site-specific DNA methylase [Acinetobacter sp. RUH2624] Length = 490 Score = 51.7 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG-DIAK 58 I D F G GG LE+ F +I +P ++ ++AN PNT F D+ Sbjct: 13 IVDNFAGGGGTSTGLEKAFGRP-------VDIAINHDPKAIAMHRANHPNTRHFCEDVWD 65 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQA 82 + + + ++ C+ FS+A Sbjct: 66 VDPVKVTNNQPVGLVWLSPDCKHFSKA 92 >gi|168204994|ref|ZP_02630999.1| modification methylase DdeI [Clostridium perfringens E str. JGS1987] gi|168212393|ref|ZP_02638018.1| modification methylase DdeI [Clostridium perfringens CPE str. F4969] gi|170663374|gb|EDT16057.1| modification methylase DdeI [Clostridium perfringens E str. JGS1987] gi|170716088|gb|EDT28270.1| modification methylase DdeI [Clostridium perfringens CPE str. F4969] Length = 436 Score = 51.7 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 19/43 (44%), Gaps = 4/43 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ 44 + + DLF G GG+ + + + E + ++ +T + Sbjct: 1 MNVIDLFSGGGGLTEGFVR----QGYKIIAHVEKDRWACETLK 39 >gi|169977330|emb|CAQ18912.1| domains rearranged methyltransferase [Nicotiana sylvestris] gi|169977332|emb|CAQ18913.1| domains rearranged methyltransferase [Nicotiana sylvestris] gi|169977334|emb|CAQ18914.1| domains rearranged methyltransferase [Nicotiana sylvestris] gi|169977336|emb|CAQ18915.1| domains rearranged methyltransferase [Nicotiana sylvestris] Length = 608 Score = 51.7 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 11/86 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTY--QAN-FPNTLIFGDIA 57 + + LF GIGG + L + N SE+N V+++ Q N N + F D+ Sbjct: 482 INVLSLFSGIGGGEVALYRLGIPLNTVVSVEKSEVNRDIVRSWWEQTNQKGNLIHFNDVQ 541 Query: 58 KIK-------TQDIPDHDVLLAGFPC 76 ++ + D+++ G PC Sbjct: 542 QLNGDRLEQLIESFGGFDLVIGGSPC 567 >gi|293570787|ref|ZP_06681836.1| cytosine-specific methyltransferase NlaX [Enterococcus faecium E980] gi|291609140|gb|EFF38413.1| cytosine-specific methyltransferase NlaX [Enterococcus faecium E980] Length = 310 Score = 51.7 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%) Query: 54 GDIAKIKTQDIPDH---DVLLAGFPCQPFSQAG 83 DI K+ + I D++ GFPCQ FS AG Sbjct: 2 HDITKLSDEFIRGIGRLDIITGGFPCQAFSLAG 34 >gi|154492433|ref|ZP_02032059.1| hypothetical protein PARMER_02067 [Parabacteroides merdae ATCC 43184] gi|154087658|gb|EDN86703.1| hypothetical protein PARMER_02067 [Parabacteroides merdae ATCC 43184] Length = 540 Score = 51.7 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 15/94 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLFCG GG + H E + ++ ++ AN P+ L F DI ++ Sbjct: 6 YIDLFCGAGGTSTGVNTARLHGEQCAEVIACVNHDANAIASHAANHPDALHFTEDIRTLE 65 Query: 61 TQDI-----------PDH-DVLLAGFPCQPFSQA 82 + PD VL A C FS+A Sbjct: 66 LSPLVHHLQKCRTKNPDALVVLWASLECTNFSRA 99 >gi|298677086|ref|NP_001177350.1| DNA methyltransferase 3 [Apis mellifera] gi|296883331|gb|ADH84015.1| DNA methyltransferase 3 [Apis mellifera] Length = 758 Score = 51.7 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Query: 31 FSSEINPYSVKTYQANFPNTLIF----GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 ++SEI+ ++ ++F + ++ DI ++I D+L+ G PC S A Sbjct: 498 YASEIDQDALMVTASHFGDRILQLGNVKDITCNTIKEIAPIDLLIGGSPCNDLSLA 553 >gi|223945129|gb|ACN26648.1| unknown [Zea mays] Length = 603 Score = 51.7 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 34/87 (39%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + + S E + + ++ + T + D+ Sbjct: 480 MNVLSLFSGIGGAEVALHRLG--IQMNTVISVEKSEVNRTILKSWWDQTQTGTLIEITDV 537 Query: 57 AKIKTQDIP-------DHDVLLAGFPC 76 + ++ I D+++ G PC Sbjct: 538 QTLSSERIEAYIRRIGGFDLVIGGSPC 564 >gi|2129405|pir||S53867 DNA (cytosine)-methyltransferase (EC 2.1.1.-) Dcm5a - Halobacterium salinarum gi|732794|emb|CAA56444.1| cytosine methylase [Halobacterium phage phiH] Length = 245 Score = 51.7 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 11/89 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVEC-----FFSSEINPYSVKTYQANFP--NTLIFGDI 56 + DLF G GG+ + + N+E + +++T++ N N I Sbjct: 8 VVDLFAGAGGLSTGVAKACEDLNLEPGEDLELHAVNHWKPAIRTHEENHGWANHYHAR-I 66 Query: 57 AKI---KTQDIPDHDVLLAGFPCQPFSQA 82 ++ D +L G C FS A Sbjct: 67 EELYPPNVVDPGSVTLLTGGPECTHFSNA 95 >gi|323447592|gb|EGB03507.1| hypothetical protein AURANDRAFT_67940 [Aureococcus anophagefferens] Length = 1523 Score = 51.3 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 8/82 (9%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--IKTQD 63 ++F G G + L+ V + E +P N PN +GDI I Sbjct: 274 EIFAGFGSMSRALQDG----GVSIVATCENDPRKAGALANNLPNVHNYGDIHDDSIVGHV 329 Query: 64 IPDHDV--LLAGFPCQPFSQAG 83 V + AG CQ +S+AG Sbjct: 330 WNPRSVSAIAAGVECQDYSKAG 351 >gi|260559315|ref|ZP_05831497.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium C68] gi|261207983|ref|ZP_05922662.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TC 6] gi|260074675|gb|EEW62995.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium C68] gi|260077782|gb|EEW65494.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TC 6] Length = 331 Score = 51.3 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%) Query: 54 GDIAKIKTQDIPD---HDVLLAGFPCQPFSQAG 83 DI + + I D+L GFPCQ FS AG Sbjct: 2 HDITSVSDEFIQSLGPVDILCGGFPCQAFSIAG 34 >gi|301621114|ref|XP_002939909.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Xenopus (Silurana) tropicalis] Length = 495 Score = 51.3 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 8/82 (9%) Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59 +++ LF GI L VE + +SE+ ++ + P + + GD+ I Sbjct: 217 IRVLSLFDGI---ATGLVSLKILKIQVEKYVASEVCKDAINVGKTRHPGEITYVGDVRNI 273 Query: 60 KTQDIPD---HDVLLAGFPCQP 78 + I + D+++ G PC Sbjct: 274 TRKQISEWGPFDLVIGGSPCND 295 >gi|297727887|ref|NP_001176307.1| Os11g0109200 [Oryza sativa Japonica Group] gi|77548342|gb|ABA91139.1| hypothetical protein LOC_Os11g01810 [Oryza sativa Japonica Group] gi|255679702|dbj|BAH95035.1| Os11g0109200 [Oryza sativa Japonica Group] Length = 473 Score = 51.3 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + ++ EI+ ++ ++ + T + D+ Sbjct: 308 MNVLSLFSGIGGAEVALHRLGIC--MKTVVLVEISEVNMTLLRSWWDQTQTGTLIEIADV 365 Query: 57 AKIKTQDIP-------DHDVLLAGFPC 76 + + I D+++ G PC Sbjct: 366 QNLTAERIELFIRRFGGFDLVIGGSPC 392 >gi|284176374|ref|YP_003406650.1| C-5 cytosine-specific DNA methylase [Haloterrigena turkmenica DSM 5511] gi|284018031|gb|ADB63977.1| C-5 cytosine-specific DNA methylase [Haloterrigena turkmenica DSM 5511] Length = 618 Score = 51.3 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 34/111 (30%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFS-----------------------------SEI 35 DLF G GG+ L + + E + + Sbjct: 9 VDLFAGAGGLSTGLVKAIIDTHAETIAAETGLSPDDLSSSDTRVHWWLAENVELHAVNHW 68 Query: 36 NPYSVKTYQANFP-NTLIFGDIAKIKTQDI---PDHDVLLAGFPCQPFSQA 82 P ++ T++ N P I ++ D+ + D+L+ G C S+A Sbjct: 69 EP-AIATHEQNHPWAEHYHAKIEELHPPDVVEPGEVDLLVGGPSCTHHSRA 118 >gi|156064739|ref|XP_001598291.1| hypothetical protein SS1G_00377 [Sclerotinia sclerotiorum 1980] gi|154691239|gb|EDN90977.1| hypothetical protein SS1G_00377 [Sclerotinia sclerotiorum 1980 UF-70] Length = 789 Score = 51.3 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 17/90 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 D +CG GG+ + ++ + ++NP++ T+Q NFP + + Sbjct: 473 YTYGDGYCGAGGMTVGAAAA----GLKVKWGFDLNPHAGLTWQNNFP----LAEFHLLPV 524 Query: 62 QDI---PD------HDVLLAGFPCQPFSQA 82 + PD D+L PCQ FS A Sbjct: 525 NEFAALPDPRKNLWVDILHLSPPCQVFSPA 554 >gi|301596944|ref|ZP_07241952.1| DNA-cytosine methyltransferase [Acinetobacter baumannii AB059] Length = 50 Score = 51.3 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 +K+ D F G GG L Q ++ + + + +TYQANFP L + Sbjct: 1 MKVIDFFSGCGGASEGLRQA----GLDITIGLDFDIKAAETYQANFPEALFYN 49 >gi|162463668|ref|NP_001104977.1| hypothetical protein LOC541826 [Zea mays] gi|7716575|gb|AAF68437.1| putative DNA cytosine methyltransferase Zmet3 [Zea mays] Length = 603 Score = 51.3 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + N S E + + ++ + T + D+ Sbjct: 480 MNVLSLFSGIGGAEVALHRLGIRMN--TVISVEKSEVNRTILKSWWDQTQTGTLIEITDV 537 Query: 57 AKIKTQDIP-------DHDVLLAGFPC 76 + ++ I D+++ G PC Sbjct: 538 QTLSSERIEAYIRRIGGFDLVIGGSPC 564 >gi|297380299|gb|ADI35186.1| DNA-cytosine methyltransferase [Helicobacter pylori v225d] Length = 264 Score = 51.3 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/25 (64%), Positives = 19/25 (76%) Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 IK D+PD DVL++GFPCQ FS G Sbjct: 3 IKPNDLPDFDVLISGFPCQAFSING 27 >gi|29376841|ref|NP_815995.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis V583] gi|29344306|gb|AAO82065.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis V583] Length = 331 Score = 51.3 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%) Query: 55 DIAKIKTQDIPD---HDVLLAGFPCQPFSQAG 83 DI + + I D+L GFPCQ FS AG Sbjct: 3 DITSVSDEFIQSLGPVDILCGGFPCQAFSIAG 34 >gi|154310415|ref|XP_001554539.1| hypothetical protein BC1G_07127 [Botryotinia fuckeliana B05.10] gi|150851459|gb|EDN26652.1| hypothetical protein BC1G_07127 [Botryotinia fuckeliana B05.10] Length = 2323 Score = 51.3 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 23/89 (25%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTY-QANFPNTLIFGDIAKI-----KTQDI--- 64 L + + +E FS EI+P + ++Y + NF N I DI ++ + I Sbjct: 118 FSEGLRKRGHDFRIEHVFSCEIDP-AKQSYIRRNFHNVPILRDITEVFEWEGNPEKIGFM 176 Query: 65 -------------PDHDVLLAGFPCQPFS 80 DV++ G C +S Sbjct: 177 TTAFGRTYALPAPGTVDVIIVGTSCTSYS 205 >gi|37693466|dbj|BAC99051.1| chloroplast-resident DNA methyltransferase [Chlamydomonas reinhardtii] Length = 1344 Score = 51.3 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GD 55 D+F G GG+ L Q+ ++ E + + K Y N P+T + GD Sbjct: 732 LDIFAGCGGLSEGLHQSGVSS---TLWAVEFDANAAKAYTENNPHTEVLVGD 780 >gi|20278869|dbj|BAB91073.1| chloroplast-resident DNA methyltransferase [Chlamydomonas reinhardtii] Length = 1344 Score = 51.3 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GD 55 D+F G GG+ L Q+ ++ E + + K Y N P+T + GD Sbjct: 732 LDIFAGCGGLSEGLHQSGVSS---TLWAVEFDANAAKAYTENNPHTEVLVGD 780 >gi|121610581|ref|YP_998388.1| C-5 cytosine-specific DNA methylase [Verminephrobacter eiseniae EF01-2] gi|121555221|gb|ABM59370.1| C-5 cytosine-specific DNA methylase [Verminephrobacter eiseniae EF01-2] Length = 494 Score = 51.3 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 + DLF G GG + Q + +P ++ +QAN P T + D+ ++ Sbjct: 15 VIDLFAGGGGASCGIAQAIGRS---VDVAINHDPEAIGLHQANHPQTRHYCADVFEVDPV 71 Query: 63 DI---PDHDVLLAGFPCQPFSQA 82 + +L A C+ FS+A Sbjct: 72 AVTHGRPVGLLWASPDCKHFSKA 94 >gi|94264149|ref|ZP_01287946.1| C-5 cytosine-specific DNA methylase [delta proteobacterium MLMS-1] gi|93455407|gb|EAT05605.1| C-5 cytosine-specific DNA methylase [delta proteobacterium MLMS-1] Length = 578 Score = 51.3 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 40/132 (30%), Gaps = 52/132 (39%) Query: 4 ITDLFCGIGGIRLDLE--QTFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLIFGD- 55 + DLF G GG+ + + S E +PY+ T + FP I + Sbjct: 65 VIDLFAGPGGLAEGFAAFRADEKKPFRIELSVEKDPYAHSTLELRAFFRQFPKNKIPDEY 124 Query: 56 ---IA-------------------------------KIKTQDI--------PDHD--VLL 71 I K+ + +I D D +L+ Sbjct: 125 YAYIRQEISKTELFDAWPEESKKAKNEAWLAELGSEKLSSSEIDQRIKNALGDADKWMLI 184 Query: 72 AGFPCQPFSQAG 83 G PCQ +S G Sbjct: 185 GGPPCQAYSTVG 196 >gi|323454936|gb|EGB10805.1| hypothetical protein AURANDRAFT_62303 [Aureococcus anophagefferens] Length = 1635 Score = 51.3 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD----HDVLLAG 73 L + F R EI+ +++ +A P+ L GD A+++ +++P + ++ G Sbjct: 839 LSKAFALRGARIVAVGEIDETALEMLRAEHPDALAMGDTARLEYRNVPWSRHAYRIVCGG 898 Query: 74 FPCQ 77 FPCQ Sbjct: 899 FPCQ 902 >gi|323447623|gb|EGB03537.1| hypothetical protein AURANDRAFT_67921 [Aureococcus anophagefferens] Length = 675 Score = 51.3 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD----HDVLLAG 73 L + F R EI+ +++ +A P+ L GD A+++ +++P + ++ G Sbjct: 220 LSKAFALRGARIVAVGEIDETALEMLRAEHPDALAMGDTARLEYRNVPWSRHAYRIVCGG 279 Query: 74 FPCQ 77 FPCQ Sbjct: 280 FPCQ 283 >gi|125718611|ref|YP_001035744.1| modification methylase [Streptococcus sanguinis SK36] gi|125498528|gb|ABN45194.1| Modification methylase, putative [Streptococcus sanguinis SK36] Length = 408 Score = 51.3 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 14/29 (48%), Positives = 21/29 (72%) Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 DI+++ +QD+PD D+L FPCQ S +G Sbjct: 104 DISEVHSQDLPDADILTYSFPCQDLSVSG 132 >gi|284054198|ref|ZP_06384408.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] Length = 90 Score = 51.3 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 8/71 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLF G GG L + + E+ + TY N + QD Sbjct: 27 VLDLFAGCGGFSLGFKAA----GFQTIGY-EMLADAAATYTRNLQDPCYCQ--TLEIGQD 79 Query: 64 IPDH-DVLLAG 73 + +H DV++ G Sbjct: 80 LCNHPDVIIGG 90 >gi|242087283|ref|XP_002439474.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor] gi|241944759|gb|EES17904.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor] Length = 1441 Score = 51.3 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAK 58 L + DL+CG GG+ L V ++ + + + +T++ N P T + + Sbjct: 856 LSLLDLYCGCGGMSTGLCLGARGGGVNLVARWAVDGDEVACETFRLNHPETRVRNETTD 914 Score = 37.4 bits (87), Expect = 0.64, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 10/17 (58%) Query: 64 IPDHDVLLAGFPCQPFS 80 + D DV+ G PCQ S Sbjct: 1048 LGDVDVICGGPPCQGIS 1064 >gi|145348417|ref|XP_001418645.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578875|gb|ABO96938.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 398 Score = 51.3 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 16/94 (17%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ +L+ GIG RL LE ++ + + + + Y+ANF + ++ + Sbjct: 42 RLVELYSGIGATRLALE---PLVTLKSAIAVDNSDAANAVYEANFADAPRRVNVEHLDLN 98 Query: 63 DI------------PDHD-VLLAGFPCQPFSQAG 83 + +D VL PCQP+++ G Sbjct: 99 ALFASGNGDEGRQGRRNDYVLTVSPPCQPYTRRG 132 >gi|94971290|ref|YP_593338.1| DNA-cytosine methyltransferase [Candidatus Koribacter versatilis Ellin345] gi|94553340|gb|ABF43264.1| DNA-cytosine methyltransferase [Candidatus Koribacter versatilis Ellin345] Length = 508 Score = 50.9 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 45/132 (34%), Gaps = 49/132 (37%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKT--YQANF------PN 49 M+ + DLF G GG+ + S E +P + KT ++ F PN Sbjct: 1 MIPVIDLFAGPGGLGEGFSALRDDAGRRVFRIGLSIEKDPAAHKTLLLRSFFRQFEIAPN 60 Query: 50 ---TLIFGD--IAKIKTQ---------------DIPDHD------------------VLL 71 + + G+ I+++ ++ HD VL+ Sbjct: 61 QYYSYVRGELAISQLIEAFPTQYGSAQEEALCVELGKHDWTDIDSRIRRAIGDFKNWVLI 120 Query: 72 AGFPCQPFSQAG 83 G PCQ +S G Sbjct: 121 GGPPCQAYSLVG 132 >gi|295101554|emb|CBK99099.1| Site-specific DNA methylase [Faecalibacterium prausnitzii L2-6] Length = 471 Score = 50.9 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 14/33 (42%), Positives = 16/33 (48%) Query: 51 LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + GDI KI I D + G PCQ S AG Sbjct: 2 IHLGDITKIHGDQIEPVDCITFGSPCQDLSMAG 34 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49 + LF GIGG L E + ++SEI + + + F N Sbjct: 413 TLGSLFDGIGGFPLVWETAYGA--GTAVWASEIEEFPIAVTKRWFGN 457 >gi|54027658|ref|YP_121899.1| hypothetical protein pnf1100 [Nocardia farcinica IFM 10152] gi|54019166|dbj|BAD60535.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 561 Score = 50.9 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 12/89 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIF-GDIA 57 ML++ D FCG GG + C ++ + +++T+ N+P F GD++ Sbjct: 1 MLELMDWFCGAGGSTQGASKVPGV----CVTRAANHWDK-AIETHATNYPEADHFLGDLS 55 Query: 58 KIKTQ----DIPDHDVLLAGFPCQPFSQA 82 + + P D+ A C +S A Sbjct: 56 TEEAKAQIVKWPVADIFWASPECPQWSSA 84 >gi|332284778|ref|YP_004416689.1| hypothetical protein PT7_1525 [Pusillimonas sp. T7-7] gi|330428731|gb|AEC20065.1| hypothetical protein PT7_1525 [Pusillimonas sp. T7-7] Length = 112 Score = 50.9 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60 +K DLF G+GG +Q V +++ +V+ + AN P T D+ + Sbjct: 1 MKAIDLFAGLGGNSEGAKQA----GVPVVWAANHWESAVQIHAANHPGTGHACQDLHQAD 56 Query: 61 TQDIPDH 67 +P H Sbjct: 57 WTQVPAH 63 >gi|219129968|ref|XP_002185148.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403327|gb|EEC43280.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 376 Score = 50.9 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQT------FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 L+ + F G+GG + L++ + + C + + + ++ ++ N + Sbjct: 7 LRYVEFFAGVGGWTMALQEAIQIVYPSDPPELFCSAALDHSDLCIEVFEHNHSLVIQKAV 66 Query: 56 -IAKIKTQDIPD--HDVLLAGFPCQPFSQ 81 I K+ I + D+ + PCQP ++ Sbjct: 67 RIEKLTMNQIFEYRADIWMMSPPCQPHTR 95 >gi|218185097|gb|EEC67524.1| hypothetical protein OsI_34820 [Oryza sativa Indica Group] gi|222615374|gb|EEE51506.1| hypothetical protein OsJ_32669 [Oryza sativa Japonica Group] Length = 477 Score = 50.9 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + ++ EI+ ++ ++ + T + D+ Sbjct: 354 MNVLSLFSGIGGAEVALHRLGIC--MKTVVLVEISEVNMTLLRSWWDQTQTGTLIEIADV 411 Query: 57 AKIKTQDIP-------DHDVLLAGFPC 76 + + I D+++ G PC Sbjct: 412 QNLTAERIELFIRRFGGFDLVIGGSPC 438 >gi|224071435|ref|XP_002303458.1| DNA methyltransferase [Populus trichocarpa] gi|222840890|gb|EEE78437.1| DNA methyltransferase [Populus trichocarpa] Length = 729 Score = 50.9 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 8/58 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF-----FSSEINPYSVKTYQANFPNTLIFG 54 L + DLF G GG+ L V C ++ + + + ++ + N P T + Sbjct: 171 LTLLDLFSGCGGMSTGL---CLGAKVSCVDLVTRWALDSDESACQSLKLNHPETHVRN 225 Score = 37.0 bits (86), Expect = 0.87, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 349 DADVICGGPPCQGIS 363 >gi|109946723|ref|YP_663951.1| cytosine specific DNA methyltransferase fragment 1 [Helicobacter acinonychis str. Sheeba] gi|109713944|emb|CAJ98952.1| cytosine specific DNA methyltransferase fragment 1 [Helicobacter acinonychis str. Sheeba] Length = 81 Score = 50.9 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 17/85 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPNTL-IFGDIA 57 KI DLFCG GG R LE+ ++C ++ T++ N N + I GDI Sbjct: 3 YKILDLFCGAGGFRARLERLKEFSPLIGLDCG------KQALNTFKNNHKNAMGICGDIT 56 Query: 58 KIKTQD--IP-----DHDVLLAGFP 75 + ++ I + ++++ G P Sbjct: 57 QADIKEKVIELAKKLEINMIIGGSP 81 >gi|228471480|ref|ZP_04056261.1| C-5 cytosine-specific DNA methylase [Porphyromonas uenonis 60-3] gi|228306692|gb|EEK15843.1| C-5 cytosine-specific DNA methylase [Porphyromonas uenonis 60-3] Length = 291 Score = 50.9 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Query: 51 LIFGDIAKIKTQDIPD-HDVLLAGFPCQPFS 80 I+GDI + ++ D+L GFPCQ FS Sbjct: 5 PIYGDITSLNGRNFKGAFDILCGGFPCQAFS 35 >gi|110739012|dbj|BAF01425.1| putative chromomethylase [Arabidopsis thaliana] Length = 839 Score = 50.9 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 6/64 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + DL+ G G + L + ++ ++N ++ K+ Q N P T ++ + Sbjct: 270 TLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPET----NVRNMT 325 Query: 61 TQDI 64 +D Sbjct: 326 AEDF 329 Score = 34.7 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 8/14 (57%) Query: 67 HDVLLAGFPCQPFS 80 DV+ G PCQ S Sbjct: 451 VDVVCGGPPCQGIS 464 >gi|14647157|gb|AAK71870.1| chromomethylase 3 [Arabidopsis thaliana] Length = 839 Score = 50.9 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 6/64 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + DL+ G G + L + ++ ++N ++ K+ Q N P T ++ + Sbjct: 270 TLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPET----NVRNMT 325 Query: 61 TQDI 64 +D Sbjct: 326 AEDF 329 Score = 34.7 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 8/14 (57%) Query: 67 HDVLLAGFPCQPFS 80 DV+ G PCQ S Sbjct: 451 VDVVCGGPPCQGIS 464 >gi|14583092|gb|AAK69756.1|AF383170_1 chromomethylase CMT3 [Arabidopsis thaliana] Length = 839 Score = 50.9 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 6/64 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + DL+ G G + L + ++ ++N ++ K+ Q N P T ++ + Sbjct: 270 TLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPET----NVRNMT 325 Query: 61 TQDI 64 +D Sbjct: 326 AEDF 329 Score = 34.7 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 8/14 (57%) Query: 67 HDVLLAGFPCQPFS 80 DV+ G PCQ S Sbjct: 451 VDVVCGGPPCQGIS 464 >gi|15222449|ref|NP_177135.1| CMT3 (chromomethylase 3); DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana] gi|110832800|sp|Q94F88|CMT3_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT3; AltName: Full=Chromomethylase 3; AltName: Full=Protein CHROMOMETHYLASE 3 gi|12325192|gb|AAG52543.1|AC013289_10 putative chromomethylase; 17383-22406 [Arabidopsis thaliana] gi|332196852|gb|AEE34973.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana] Length = 839 Score = 50.9 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 6/64 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + DL+ G G + L + ++ ++N ++ K+ Q N P T ++ + Sbjct: 270 TLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPET----NVRNMT 325 Query: 61 TQDI 64 +D Sbjct: 326 AEDF 329 Score = 34.7 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 8/14 (57%) Query: 67 HDVLLAGFPCQPFS 80 DV+ G PCQ S Sbjct: 451 VDVVCGGPPCQGIS 464 >gi|296535365|ref|ZP_06897565.1| site-specific DNA methylase [Roseomonas cervicalis ATCC 49957] gi|296264307|gb|EFH10732.1| site-specific DNA methylase [Roseomonas cervicalis ATCC 49957] Length = 337 Score = 50.5 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 15/83 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIK 60 +++ DLFCG GG ++ E + + +V+ Y NF + + Sbjct: 3 IRVLDLFCGGGGSSWGAQRA----GAEIVCGVDAWDK-AVEAYGLNFGREKVRH--LTLT 55 Query: 61 TQ-------DIPDHDVLLAGFPC 76 DI D++LA C Sbjct: 56 PDTGPEALGDIGPIDLILASPEC 78 >gi|233770216|gb|ACQ91181.1| DRM-type cytosine DNA-methyltransferase [Fragaria x ananassa] Length = 596 Score = 50.5 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 15/88 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55 + + LF GIGG + L + ++ S EI+ S + + T G D Sbjct: 471 INLLSLFSGIGGAEIALHRLGIR--MKNVVSVEISGVSRTVVRTWWEQTNQKGNLYHLAD 528 Query: 56 IAKIKTQ-------DIPDHDVLLAGFPC 76 + ++ D+++ G PC Sbjct: 529 VQELNADRLEHYINTFGGFDLVVGGSPC 556 >gi|327289287|ref|XP_003229356.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B, partial [Anolis carolinensis] Length = 418 Score = 50.5 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L VE + +SEI S+ ++ N +I Sbjct: 142 IRVLSLFDGIATGYLVLRDLGIK--VEKYVASEICEESIAVGTVRHEGNITYVHDVRNIT 199 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81 K + D+++ G PC S Sbjct: 200 KRNIDEWGPFDLVIGGSPCNDLSI 223 >gi|323447739|gb|EGB03650.1| hypothetical protein AURANDRAFT_67860 [Aureococcus anophagefferens] Length = 723 Score = 50.5 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--IKTQD 63 ++F G G + + V + E +P N P+ +GDI I Sbjct: 2 EIFAGSGSMS----RALRDGGVSIVATCENDPRKAGALANNLPDVHNYGDIHDDSIVGHV 57 Query: 64 IPDHDV--LLAGFPCQPFSQAG 83 V + AG CQ +S+AG Sbjct: 58 WNPRSVSAIAAGVECQDYSKAG 79 >gi|67925212|ref|ZP_00518579.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] gi|67852948|gb|EAM48340.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501] Length = 417 Score = 50.5 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 5/65 (7%) Query: 24 HRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI----PDHDVLLAGFPCQP 78 H + + S EI + T N P + +GD +K ++ DV+ G PCQP Sbjct: 98 HAGFQHYQSYEIIRDAAVTIMQNRPQWNVFYGDDGNVKNKNWSFLKNQIDVIHGGPPCQP 157 Query: 79 FSQAG 83 FS AG Sbjct: 158 FSIAG 162 >gi|116620808|ref|YP_822964.1| DNA-cytosine methyltransferase [Candidatus Solibacter usitatus Ellin6076] gi|116223970|gb|ABJ82679.1| DNA-cytosine methyltransferase [Candidatus Solibacter usitatus Ellin6076] Length = 423 Score = 50.5 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 33/102 (32%), Gaps = 25/102 (24%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-------NPYSVKTYQANFPNT-LIFG 54 ++ F G+G + L E+ F +E ++ + N P + G Sbjct: 30 RLFSFFSGLGFLDLGFEKA----GYTVAFVNEFRASFLKAYKHARLHLKMNPPEYGYVQG 85 Query: 55 DIAKI-------------KTQDIPDHDVLLAGFPCQPFSQAG 83 DI+ ++ + + G PC FS G Sbjct: 86 DISDFLNGAGDRLSGQVRDSKLAGNLVGFVGGPPCPDFSVGG 127 >gi|320109254|ref|YP_004184844.1| hypothetical protein AciPR4_4102 [Terriglobus saanensis SP1PR4] gi|319927775|gb|ADV84850.1| hypothetical protein AciPR4_4102 [Terriglobus saanensis SP1PR4] Length = 248 Score = 50.5 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 11/78 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ DLFC GG + + + +INP +P I ++ ++ Sbjct: 27 RLLDLFCCAGGAGVGYSRA----GFDVVG-VDINPQPR------YPLPFIQANVFQLDFN 75 Query: 63 DIPDHDVLLAGFPCQPFS 80 + D + A PCQ +S Sbjct: 76 FLTSFDAIHASPPCQSYS 93 >gi|325129892|gb|EGC52695.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304] Length = 335 Score = 50.5 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 7/69 (10%) Query: 22 FNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK-----TQDIPDH-DVLLAGF 74 ++ ++ ++E+ P Y+A +P +I GDI + Q +P+ D L+A Sbjct: 1 MHNAGIKIIAANELVPERANLYKALYPESKMIIGDILHEEVFQNLIQSVPNRLDFLIASP 60 Query: 75 PCQPFSQAG 83 PCQ S AG Sbjct: 61 PCQGMSVAG 69 >gi|238761849|ref|ZP_04622823.1| Cytosine-specific methyltransferase [Yersinia kristensenii ATCC 33638] gi|238699963|gb|EEP92706.1| Cytosine-specific methyltransferase [Yersinia kristensenii ATCC 33638] Length = 826 Score = 50.5 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 38/102 (37%), Gaps = 26/102 (25%) Query: 1 MLKITDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNTLIFG 54 ML LF GIG L+ C ++E+ + + N + I G Sbjct: 1 MLNYISLFSSAGIGC--YGLKSA----GFNCVATAELLEKRLNIQRYNNKCKYETGYISG 54 Query: 55 DIA----------KIKT----QDIPDHDVLLAGFPCQPFSQA 82 D+ +I + + I D D+++A PCQ S A Sbjct: 55 DLTDPVVHKKLYDEINSFKDKEKISDLDLVIATPPCQGMSVA 96 >gi|297625484|ref|YP_003687247.1| DNA (cytosine-5-)-methyltransferase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921249|emb|CBL55799.1| DNA (cytosine-5-)-methyltransferase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 552 Score = 50.5 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 M + +LF G GG+ L L E ++E++P + +++ N Sbjct: 1 MPRFVELFAGCGGLSLGLRAA----GWEEAMANELSPMAAQSFAFN 42 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 7/40 (17%) Query: 51 LIFGDIAKIK------TQDIP-DHDVLLAGFPCQPFSQAG 83 LI GDI + P D D++ G PCQ FS AG Sbjct: 106 LIVGDIRALNDWMRDHPSQRPKDVDLISGGPPCQSFSMAG 145 >gi|192824258|ref|YP_001994899.1| gp82 [Mycobacterium phage Pukovnik] gi|190610488|gb|ACE80008.1| gp82 [Mycobacterium phage Pukovnik] Length = 228 Score = 50.5 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 11/80 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M ++ DLFCG GG + + E +I + + ++P GD + Sbjct: 1 MPRLLDLFCGAGGAGMGYHRA----GFEVVG-VDI---AQ---RDSYPFEFHQGDALEFL 49 Query: 61 TQDIPDHDVLLAGFPCQPFS 80 + D + A PCQ +S Sbjct: 50 KAHGHEFDAIHASPPCQRYS 69 >gi|323703857|ref|ZP_08115492.1| DNA-cytosine methyltransferase [Desulfotomaculum nigrificans DSM 574] gi|323531175|gb|EGB21079.1| DNA-cytosine methyltransferase [Desulfotomaculum nigrificans DSM 574] Length = 409 Score = 50.5 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 15/75 (20%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKIKTQDI--------PDHD 68 EQ E + Y ++T +A N+P GD+ +I + DI D Sbjct: 54 EQAGFT----TAAFVENDKYCIETIKANRNWPLVGN-GDVTEITSYDILKEANLSKGDVA 108 Query: 69 VLLAGFPCQPFSQAG 83 +L G PCQPFS G Sbjct: 109 LLAGGAPCQPFSNLG 123 >gi|46019827|emb|CAE52349.1| putative cytosine-specific methyltransferase [Streptococcus thermophilus] Length = 408 Score = 50.5 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 34/113 (30%) Query: 2 LKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +KI +LF G GG+ LEQ+ N++ + E V+T + D +I Sbjct: 1 MKINNIELFAGAGGLVDGLEQSG---NIQLLSAVEWLKPQVRTLVNRLESKYNIQDAKEI 57 Query: 60 -----------------KTQDI------------PDHDVLLAGFPCQPFSQAG 83 ++ + ++ G PCQ + AG Sbjct: 58 VLNFDIQRTEELINGWSNDEEFGSSPGLAKIVGNKEVHMISGGPPCQAYPLAG 110 >gi|212720705|ref|NP_001131171.1| hypothetical protein LOC100192479 [Zea mays] gi|194690774|gb|ACF79471.1| unknown [Zea mays] Length = 609 Score = 50.5 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + N S E + + ++ + T + D+ Sbjct: 486 MNVLSLFTGIGGAEVALHRLGIRMN--TVVSVEKSEVNRTILKSWWDQTQTGTLIEINDV 543 Query: 57 AKIKTQDIP-------DHDVLLAGFPC 76 + I D+++ G PC Sbjct: 544 QTLTADRIEAYIRRIGGFDLVIGGSPC 570 >gi|297194175|ref|ZP_06911573.1| DNA-cytosine methyltransferase [Streptomyces pristinaespiralis ATCC 25486] gi|297152146|gb|EFH31551.1| DNA-cytosine methyltransferase [Streptomyces pristinaespiralis ATCC 25486] Length = 328 Score = 50.5 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 8/76 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 D+ G GG+ LE + + +T AN P+ ++ D+ Sbjct: 7 FVDVCAGAGGLASGLESA----GFSPVLLLDNKRQACETLLANRPHWNVVCEDLVDFLPD 62 Query: 63 DIP---DHDVLLAGFP 75 D P D D+L AG P Sbjct: 63 DHPETLDVDLLSAGLP 78 >gi|238922584|ref|YP_002936097.1| modification methylase, putative [Eubacterium rectale ATCC 33656] gi|238874256|gb|ACR73963.1| modification methylase, putative [Eubacterium rectale ATCC 33656] Length = 433 Score = 50.5 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 34/138 (24%), Gaps = 57/138 (41%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------ 54 M ++ + F GIG L + E +++ + ++ Y + Sbjct: 15 MFRVIETFSGIGSQAKALTRIGKP--FEIVNTADWDINAILAYCLIHKGKIDINKYAEIS 72 Query: 55 --DIA----------------------------------------------KIKTQDIPD 66 D+ + DIPD Sbjct: 73 DEDVTNFLKGLSLSSDGKKPMSDETFRRMPMHLKRRLYAAIKETRNMVSITDVMGSDIPD 132 Query: 67 -HDVLLAGFPCQPFSQAG 83 D+ FPCQ S G Sbjct: 133 NIDLFTYSFPCQDLSLCG 150 >gi|149002241|ref|ZP_01827183.1| hypothetical protein CGSSp14BS69_01329 [Streptococcus pneumoniae SP14-BS69] gi|168490540|ref|ZP_02714683.1| conserved domain protein [Streptococcus pneumoniae CDC0288-04] gi|225860575|ref|YP_002742084.1| hypothetical protein SPT_0600 [Streptococcus pneumoniae Taiwan19F-14] gi|237650161|ref|ZP_04524413.1| hypothetical protein SpneC1_05447 [Streptococcus pneumoniae CCRI 1974] gi|237821760|ref|ZP_04597605.1| hypothetical protein SpneC19_05522 [Streptococcus pneumoniae CCRI 1974M2] gi|298229932|ref|ZP_06963613.1| hypothetical protein SpneCMD_04582 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255644|ref|ZP_06979230.1| hypothetical protein SpneCM_08617 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502364|ref|YP_003724304.1| hypothetical protein HMPREF0837_10862 [Streptococcus pneumoniae TCH8431/19A] gi|147759556|gb|EDK66547.1| hypothetical protein CGSSp14BS69_01329 [Streptococcus pneumoniae SP14-BS69] gi|183574997|gb|EDT95525.1| conserved domain protein [Streptococcus pneumoniae CDC0288-04] gi|225727617|gb|ACO23468.1| conserved domain protein [Streptococcus pneumoniae Taiwan19F-14] gi|298237959|gb|ADI69090.1| conserved hypothetical protein [Streptococcus pneumoniae TCH8431/19A] gi|327390310|gb|EGE88651.1| hypothetical protein SPAR5_0552 [Streptococcus pneumoniae GA04375] gi|332076406|gb|EGI86869.1| hypothetical protein SPAR68_0593 [Streptococcus pneumoniae GA41301] Length = 54 Score = 50.5 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 DLF G GG L+++ ++ + EI+ +VKTY+ N P Sbjct: 7 IDLFSGAGGTTSGLKKS----GIDVQVAVEIDSVAVKTYKLNNPEV 48 >gi|242077178|ref|XP_002448525.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor] gi|241939708|gb|EES12853.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor] Length = 913 Score = 50.5 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 3 KITDLFCGIGGIRLDL--EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G GG+ L + +E ++ ++N ++ ++ + N P T + Sbjct: 343 TLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRN 396 Score = 37.4 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 509 DVDVICGGPPCQGIS 523 >gi|242065598|ref|XP_002454088.1| hypothetical protein SORBIDRAFT_04g024430 [Sorghum bicolor] gi|241933919|gb|EES07064.1| hypothetical protein SORBIDRAFT_04g024430 [Sorghum bicolor] Length = 770 Score = 50.5 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 3 KITDLFCGIGGIRLDL--EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G GG+ L + +E ++ ++N ++ ++ + N P T + Sbjct: 349 TLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRN 402 Score = 37.4 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 514 DVDVICGGPPCQGIS 528 >gi|75157426|sp|Q8LPU5|CMT3_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 3; AltName: Full=Chromomethylase 3; AltName: Full=DNA methyltransferase 105 gi|20977600|gb|AAM28227.1| DNA methyltransferase 105 [Zea mays] Length = 915 Score = 50.5 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 3 KITDLFCGIGGIRLDL--EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G GG+ L + +E ++ ++N ++ ++ + N P T + Sbjct: 346 TLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRN 399 Score = 37.4 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 511 DVDVICGGPPCQGIS 525 >gi|162460714|ref|NP_001105167.1| DNA (cytosine-5)-methyltransferase 3 [Zea mays] gi|75167623|sp|Q9ARI6|CMT2_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 2; AltName: Full=Chromomethylase 2; AltName: Full=DNA cytosine methyltransferase MET5; AltName: Full=Zea methyltransferase5; Short=Zmet5 gi|13272199|gb|AAK15805.1| chromomethylase [Zea mays] Length = 915 Score = 50.5 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 3 KITDLFCGIGGIRLDL--EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 + DL+ G GG+ L + +E ++ ++N ++ ++ + N P T + Sbjct: 346 TLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRN 399 Score = 37.4 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 511 DVDVICGGPPCQGIS 525 >gi|171679563|ref|XP_001904728.1| hypothetical protein [Podospora anserina S mat+] gi|170939407|emb|CAP64635.1| unnamed protein product [Podospora anserina S mat+] Length = 1287 Score = 50.5 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 20/96 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPN----TLIFGDI 56 L+ DLFCG G + LE +E ++++ + ++ TY AN P+ +G + Sbjct: 807 LRGMDLFCGSGNLGRGLEDGGA---IEMRWAADTWDK-AIHTYMANAPDQDIVHPFYGSV 862 Query: 57 AKIK--------TQDIP---DHDVLLAGFPCQPFSQ 81 + + ++P D +V+ AG PC FS Sbjct: 863 DDLLRLALEGKFSDNVPRPGDVEVISAGSPCPGFSL 898 >gi|260769649|ref|ZP_05878582.1| site-specific DNA-methyltransferase putative [Vibrio furnissii CIP 102972] gi|260614987|gb|EEX40173.1| site-specific DNA-methyltransferase putative [Vibrio furnissii CIP 102972] Length = 383 Score = 50.1 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 33/101 (32%), Gaps = 25/101 (24%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPN---TLIFGD 55 I F G G + L E++ + F +E Y+ + P G Sbjct: 18 IFSFFAGTGFLDLGFERS----GFDIRFVNEFYKPFYDAYKYSRKKMGHPEPQYEHHLGS 73 Query: 56 IAKI----KTQDIPDH------DVL---LAGFPCQPFSQAG 83 I ++ + + D L + G PC FS AG Sbjct: 74 IDELLAGPPKKRLKQFLIDAKKDGLVGFIGGPPCPDFSVAG 114 >gi|229552043|ref|ZP_04440768.1| DNA-cytosine methyltransferase [Lactobacillus rhamnosus LMS2-1] gi|258539457|ref|YP_003173956.1| cytosine-specific methyltransferase [Lactobacillus rhamnosus Lc 705] gi|229314620|gb|EEN80593.1| DNA-cytosine methyltransferase [Lactobacillus rhamnosus LMS2-1] gi|257151133|emb|CAR90105.1| Cytosine-specific methyltransferase [Lactobacillus rhamnosus Lc 705] Length = 415 Score = 50.1 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 36/126 (28%), Gaps = 49/126 (38%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-----------------A 45 I DLF G GG+ + E++ + +T + Sbjct: 4 NIIDLFSGAGGLTEGFRR----PEYNILAHVEMSVDACQTLRLRDDYYQLKKRNMLQQYR 59 Query: 46 NF-----------------------PNTLIFGDI----AKIKTQ-DIPDHDVLLAGFPCQ 77 NF T+ G I AKI ++ ++ G PCQ Sbjct: 60 NFLDGKISLSELEQQCGLRQKALTINETIDTGTIDGILAKIDSKLSNRQVHGIIGGPPCQ 119 Query: 78 PFSQAG 83 +S G Sbjct: 120 AYSTVG 125 >gi|269958230|ref|YP_003328018.1| C-5 cytosine-specific DNA methylase [Xylanimonas cellulosilytica DSM 15894] gi|269306911|gb|ACZ32460.1| C-5 cytosine-specific DNA methylase [Xylanimonas cellulosilytica DSM 15894] Length = 687 Score = 50.1 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 15/87 (17%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59 DLF G GG+ +++ + ++ N Y V ++AN P T + IA + Sbjct: 24 VDLFSGFGGLTQGIDEA----GFDVITAANHNEYKVAVHEANHPETEHW--IADLVDTES 77 Query: 60 ----KTQDIPDHDVLLAGFPCQPFSQA 82 +++P D+L AG C S A Sbjct: 78 PAYHSVRELPAGDLLAAGVSCVNHSPA 104 >gi|308805380|ref|XP_003080002.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri] gi|116058461|emb|CAL53650.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri] Length = 394 Score = 50.1 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 3/82 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + +++CGIG + L + R ++NP + Y N + ++A + + Sbjct: 20 VAEMYCGIGVMSLAMRWVRRVRARTVVAY-DLNPNACDAYARNHGTRPLAKNLAGVSMEA 78 Query: 64 IPD--HDVLLAGFPCQPFSQAG 83 + + L PCQPF++ G Sbjct: 79 LGKIGAEAWLMSPPCQPFTRQG 100 >gi|326789362|ref|YP_004307183.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427] gi|326540126|gb|ADZ81985.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427] Length = 415 Score = 50.1 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 36/138 (26%), Gaps = 57/138 (41%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY-----------QANFPN 49 M + + F GIG L + N +++ + ++ Y N + Sbjct: 1 MFNVVETFSGIGSQAKALRNIGFNAN--IVATADWDINAIIAYDLIHHGKQDLTAYNHYS 58 Query: 50 TLIFGD-------------------------------------------IAKIKTQDIPD 66 + I IK +DI D Sbjct: 59 EQQLNEELSKFTLSADGKSAMTEKAKKVLPIHLKKMLLYAIRRSNNLVSITDIKGKDISD 118 Query: 67 -HDVLLAGFPCQPFSQAG 83 D+L FPCQ S G Sbjct: 119 NIDLLTYSFPCQDLSVCG 136 >gi|218193912|gb|EEC76339.1| hypothetical protein OsI_13909 [Oryza sativa Indica Group] Length = 1527 Score = 50.1 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+++ ++ E + + N P +F Sbjct: 1095 LDIFAGCGGLSEGLQRSGLSL---TKWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAI 1151 Query: 54 ----GD----IA---------KIKTQDIP------DHDVLLAGFPCQPFS 80 GD I+ K+ I + + + G PCQ FS Sbjct: 1152 MDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFS 1201 >gi|291513670|emb|CBK62880.1| Site-specific DNA methylase [Alistipes shahii WAL 8301] Length = 541 Score = 50.1 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 15/94 (15%) Query: 4 ITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 DLFCG GG +E+ + + + ++ ++ AN P + D+ + Sbjct: 8 YIDLFCGAGGTSTGVEKANYKERKCAKVIACVNHDANAIASHAANHPEAQHYTEDMRTLD 67 Query: 61 TQDIPDHD------------VLLAGFPCQPFSQA 82 + + +H VL A C FS+A Sbjct: 68 LRPLAEHTAEMRRMYPMAKVVLWASLECTNFSRA 101 >gi|75233438|sp|Q7Y1I7|DNM1A_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1A; Short=OsMET1a; AltName: Full=DNA methyltransferase 1-1; Short=OsMET1-1 gi|31126751|gb|AAP44671.1| putative DNA (cytosine-5-)-methyltransferase [Oryza sativa Japonica Group] gi|171196101|dbj|BAG15928.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica Group] gi|222625970|gb|EEE60102.1| hypothetical protein OsJ_12965 [Oryza sativa Japonica Group] Length = 1527 Score = 50.1 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+++ ++ E + + N P +F Sbjct: 1095 LDIFAGCGGLSEGLQRSGLSL---TKWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAI 1151 Query: 54 ----GD----IA---------KIKTQDIP------DHDVLLAGFPCQPFS 80 GD I+ K+ I + + + G PCQ FS Sbjct: 1152 MDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFS 1201 >gi|153852755|ref|ZP_01994192.1| hypothetical protein DORLON_00174 [Dorea longicatena DSM 13814] gi|149754397|gb|EDM64328.1| hypothetical protein DORLON_00174 [Dorea longicatena DSM 13814] Length = 367 Score = 50.1 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 14/20 (70%), Positives = 16/20 (80%) Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +PD D+L AGFPCQ FS AG Sbjct: 1 MPDFDLLCAGFPCQAFSIAG 20 >gi|328885641|emb|CCA58880.1| DNA methylase [Streptomyces venezuelae ATCC 10712] Length = 426 Score = 50.1 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 7/81 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DLF G GG + L + + E + ++ KT +A I D+A Sbjct: 8 VIDLFAGPGGWSVPLRR----FGIRDVGL-EWDEWACKT-RAAAGLLTIRTDVAMYPAGI 61 Query: 64 IPDHD-VLLAGFPCQPFSQAG 83 +A PCQ +S AG Sbjct: 62 FAGRTRGFIASPPCQAWSMAG 82 >gi|322511384|gb|ADX06692.1| putative C-5 cytosine specific DNA methyltransferase [Organic Lake phycodnavirus] Length = 358 Score = 50.1 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 41/108 (37%) Query: 11 IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------------------ 52 +GG L + Q E +E + S+++++ NFP++ + Sbjct: 1 MGGDTLGMIQA----GCEVIAFNEYDKASIQSHKMNFPDSELICASVKEREKYKESLTGT 56 Query: 53 ----------FGDIAKIKTQDIPD-------HDVLLAGFPCQPFSQAG 83 + D+ I Q+I D D++ AG PCQ FS G Sbjct: 57 KKENHKAMKDYDDVYNI--QNIQDDVLGSYKADLIFAGHPCQGFSNGG 102 >gi|18653391|gb|AAL77415.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica Group] Length = 1522 Score = 50.1 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 37/110 (33%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----------- 53 D+F G GG+ L+++ ++ E + + N P +F Sbjct: 1090 LDIFAGCGGLSEGLQRSGLSL---TKWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAI 1146 Query: 54 ----GD----IA---------KIKTQDIP------DHDVLLAGFPCQPFS 80 GD I+ K+ I + + + G PCQ FS Sbjct: 1147 MDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFS 1196 >gi|169977326|emb|CAQ18910.1| domains rearranged methyltransferase [Nicotiana sylvestris] Length = 126 Score = 49.8 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 11/85 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTY--QAN-FPNTLIFGDIAK 58 + LF GIGG + L + N SE+N V+++ Q N N + F D+ + Sbjct: 1 NVLSLFSGIGGGEVALYRLGIPLNTVVSVEKSEVNRDIVRSWWEQTNQKGNLIHFNDVQQ 60 Query: 59 IK-------TQDIPDHDVLLAGFPC 76 + + D+++ G PC Sbjct: 61 LNGDRLEQLIESFGGFDLVIGGSPC 85 >gi|326797283|ref|YP_004315103.1| DNA-cytosine methyltransferase [Marinomonas mediterranea MMB-1] gi|326548047|gb|ADZ93267.1| DNA-cytosine methyltransferase [Marinomonas mediterranea MMB-1] Length = 378 Score = 49.8 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 11/72 (15%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDIPDH------DVLL 71 E + +I+ Y+ NFP T + D+AK + +H D ++ Sbjct: 22 ELAGFQ----TVAAVDIDETLQSAYRLNFPETNVLTADLAKTGRKFWSEHLNGLQVDGVI 77 Query: 72 AGFPCQPFSQAG 83 G PCQ +S+ G Sbjct: 78 GGPPCQGYSRMG 89 >gi|225435648|ref|XP_002283355.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 965 Score = 49.8 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 6/65 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKI 59 + + DL+ G G + L V ++ +IN Y+ ++ + N P T + Sbjct: 387 MTLLDLYSGCGAMSSGLCLGAKMSGVNLVTRWAIDINAYACESVRLNHPETQ----VRNE 442 Query: 60 KTQDI 64 +D Sbjct: 443 SAEDF 447 Score = 37.4 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 572 DVDVICGGPPCQGIS 586 >gi|153812680|ref|ZP_01965348.1| hypothetical protein RUMOBE_03087 [Ruminococcus obeum ATCC 29174] gi|149831196|gb|EDM86285.1| hypothetical protein RUMOBE_03087 [Ruminococcus obeum ATCC 29174] Length = 622 Score = 49.8 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 15/74 (20%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61 K+ L GIG + + E + E + +++ Y+ N I G+I ++ Sbjct: 4 KVIILGAGIGAMTMGFENA----GCSVVAAYERDRRAIELYKKN-----ISGEINELDQL 54 Query: 62 -----QDIPDHDVL 70 +D+PD D+L Sbjct: 55 GTSNLEDVPDIDIL 68 >gi|213581465|ref|ZP_03363291.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 295 Score = 49.8 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/20 (85%), Positives = 18/20 (90%) Query: 64 IPDHDVLLAGFPCQPFSQAG 83 +P HDVLLAGFPCQPFS AG Sbjct: 1 MPQHDVLLAGFPCQPFSLAG 20 >gi|294629551|ref|ZP_06708111.1| modification methylase NaeI [Streptomyces sp. e14] gi|292832884|gb|EFF91233.1| modification methylase NaeI [Streptomyces sp. e14] Length = 328 Score = 49.8 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 8/78 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 + D+ G GG+ L LEQ E + + +V T +AN P+ ++ D+ + Sbjct: 1 MTFVDVCSGAGGLALGLEQA----GFEPRLLLDDDDDAVATLRANRPHWNVLHTDLLEFD 56 Query: 61 TQDIP---DHDVLLAGFP 75 + P D D+L AG P Sbjct: 57 PVEHPDTYDVDLLSAGLP 74 >gi|224026277|ref|ZP_03644643.1| hypothetical protein BACCOPRO_03033 [Bacteroides coprophilus DSM 18228] gi|224019513|gb|EEF77511.1| hypothetical protein BACCOPRO_03033 [Bacteroides coprophilus DSM 18228] Length = 84 Score = 49.8 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 4/39 (10%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY 43 LF G GG+ + E+ ++ F++E+ + +TY Sbjct: 8 VSLFTGAGGMDVGFER----PGIKVVFANEVMKEAAQTY 42 >gi|40021630|gb|AAR37051.1| putative cytosine DNA methyltransferase [Neurospora tetrasperma] Length = 246 Score = 49.8 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 11/87 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDI--- 56 D F G GG + H C + ++V + ANF +T I+ DI Sbjct: 89 YTAGDTFAGAGGASRGITDAGVHLEF-CV---DNWEHAVASLNANFQGQDTTIY-DIDMH 143 Query: 57 AKIKTQDIPD-HDVLLAGFPCQPFSQA 82 I ++I D+L PCQ +S A Sbjct: 144 NFIVDKEIRHRVDILHLLPPCQVWSPA 170 >gi|260890221|ref|ZP_05901484.1| modification methylase MthTI [Leptotrichia hofstadii F0254] gi|260859841|gb|EEX74341.1| modification methylase MthTI [Leptotrichia hofstadii F0254] Length = 41 Score = 49.8 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK 41 +K+ F G+GGI L EQ +S+EI+ K Sbjct: 1 MKVAGFFSGVGGIELGFEQ----VGFNVIYSNEIDKKCRK 36 >gi|145610805|ref|XP_368355.2| hypothetical protein MGG_00889 [Magnaporthe oryzae 70-15] gi|145018162|gb|EDK02441.1| hypothetical protein MGG_00889 [Magnaporthe oryzae 70-15] Length = 1269 Score = 49.8 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 36/113 (31%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L+ DLF G G + +E+ VE + ++I ++ TY AN + G + Sbjct: 711 LRGLDLFAGCGNLGRGIEEGGA---VEVKWVNDIWTNAIHTYMANTNDKSAVKPFLGSVD 767 Query: 58 KIKTQDIP-----------------------------DHDVLLAGFPCQPFSQ 81 + + + + + + G PCQ FS Sbjct: 768 LLLEKALKRDGSVLDGSVLDGSVLDGSVLDGSVPSRGEVEFISGGSPCQGFSL 820 >gi|89055349|ref|YP_510800.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1] gi|88864898|gb|ABD55775.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1] Length = 502 Score = 49.8 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 39/131 (29%), Gaps = 51/131 (38%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQAN---------FPNTL- 51 I DLF G GG+ + ++ S E V+T + FP Sbjct: 7 IIDLFAGPGGLAEGFSAAGRETDTRMKIRLSIEKEATEVRTLRLRAFLRGFDGGFPTEYY 66 Query: 52 ------------------------------------IFGDIAKIKTQDIPDHD---VLLA 72 +F IA + + +HD +L+ Sbjct: 67 AALNASEPLPDWSELFPARWADACKEAWQMELGQPGVFEVIANVLDRTREEHDGNTILIG 126 Query: 73 GFPCQPFSQAG 83 G PCQ +S AG Sbjct: 127 GPPCQAYSLAG 137 >gi|255018626|ref|ZP_05290752.1| DNA-methyltransferase (cytosine-specific) [Listeria monocytogenes FSL F2-515] Length = 172 Score = 49.8 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Query: 37 PYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 P++V+ Y F N + D+ K D+L+ G PCQ +S+ G Sbjct: 2 PFAVQAYNNIFSNDYVAQDVTKWNMS----VDLLIHGSPCQDWSKNG 44 >gi|295104947|emb|CBL02491.1| C-5 cytosine-specific DNA methylase. [Faecalibacterium prausnitzii SL3/3] Length = 167 Score = 49.8 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 + LF GIGG L + T+ + SEI+ + V + +FP Sbjct: 119 TLGSLFDGIGGFPLVFQSTYGE--GTAIWGSEIDSFCVAVTKKHFPEK 164 >gi|195655665|gb|ACG47300.1| DNA cytosine methyltransferase Zmet3 [Zea mays] Length = 609 Score = 49.8 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 14/87 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56 + + LF GIGG + L + N S E + + ++ + T + D+ Sbjct: 486 MNVLSLFTGIGGAEVALHRLGIRMN--TVISVEKSEVNRTILKSWWDQTQIGTLIEINDV 543 Query: 57 AKIKTQDIP-------DHDVLLAGFPC 76 + I D+++ G PC Sbjct: 544 QTLTADRIEAYIRRIGGFDLVIGGSPC 570 >gi|300777384|ref|ZP_07087242.1| DNA (cytosine-5-)-methyltransferase [Chryseobacterium gleum ATCC 35910] gi|300502894|gb|EFK34034.1| DNA (cytosine-5-)-methyltransferase [Chryseobacterium gleum ATCC 35910] Length = 351 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 15/88 (17%) Query: 5 TDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-----IFGD-I 56 LF GI E F + ++E+ YQA +PN+ I D I Sbjct: 4 ASLFSSAGI------AETYFEEVGINIIAANELVQERADLYQALYPNSKMIAGSILDDKI 57 Query: 57 AKIKTQDIPD-HDVLLAGFPCQPFSQAG 83 K + P+ D L+A PCQ S AG Sbjct: 58 FKTLVESTPEKLDFLIASPPCQGMSVAG 85 >gi|297194174|ref|ZP_06911572.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|297152145|gb|EFH31550.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length = 492 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 4/65 (6%) Query: 20 QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDIPDHDVLLAGFPCQP 78 + E + + T N F GD+ + + P VL G PCQ Sbjct: 1 MAAHVLGYRTTG-IEWDAGACTT--RNEAGMDTFKGDVRQYRAALFPLAQVLTGGPPCQT 57 Query: 79 FSQAG 83 F+ AG Sbjct: 58 FTVAG 62 >gi|297746421|emb|CBI16477.3| unnamed protein product [Vitis vinifera] Length = 821 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 6/65 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKI 59 + + DL+ G G + L V ++ +IN Y+ ++ + N P T + Sbjct: 204 MTLLDLYSGCGAMSSGLCLGAKMSGVNLVTRWAIDINAYACESVRLNHPETQ----VRNE 259 Query: 60 KTQDI 64 +D Sbjct: 260 SAEDF 264 Score = 37.0 bits (86), Expect = 0.80, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 428 DVDVICGGPPCQGIS 442 >gi|300704573|ref|YP_003746176.1| DNA (cytosine-5-)-methyltransferase [Ralstonia solanacearum CFBP2957] gi|299072237|emb|CBJ43569.1| DNA (cytosine-5-)-methyltransferase [Ralstonia solanacearum CFBP2957] Length = 621 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIF-GDIAK 58 I DLF G GG+ +E +I + +++ ++AN P T + D+ + Sbjct: 15 IVDLFAGGGGMSTAIEMALGR-------HVDIAINHDADAIEMHKANHPQTKHYCSDVFE 67 Query: 59 IKTQDI---PDHDVLLAGFPCQPFSQA 82 + ++ L C FSQA Sbjct: 68 VCPREATQGRPVGHLHGSPDCTHFSQA 94 >gi|224057130|ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa] gi|222846392|gb|EEE83939.1| DNA methyltransferase [Populus trichocarpa] Length = 973 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 6/63 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DL+ G G + L N + ++ ++N ++ ++ + N P T + Sbjct: 402 LLDLYSGCGAMSTGLCLGANLSGLNLVTKWAVDLNKHACESLRLNHPETQ----VRNETA 457 Query: 62 QDI 64 +D Sbjct: 458 EDF 460 Score = 34.0 bits (78), Expect = 7.8, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D +V+ G PCQ S Sbjct: 590 DVEVICGGPPCQGIS 604 >gi|301765810|ref|XP_002918318.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 4 [Ailuropoda melanoleuca] Length = 773 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ VE + +SE+ S+ ++ N +I Sbjct: 558 IRVLSLFDGIATGYLVLKELGIK--VEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 615 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 616 KRNIEEWGPFDLVIGGSPCNDLS 638 >gi|301765808|ref|XP_002918317.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 3 [Ailuropoda melanoleuca] Length = 848 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ VE + +SE+ S+ ++ N +I Sbjct: 570 IRVLSLFDGIATGYLVLKELGIK--VEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 627 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 628 KRNIEEWGPFDLVIGGSPCNDLS 650 >gi|301765806|ref|XP_002918316.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 2 [Ailuropoda melanoleuca] Length = 856 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ VE + +SE+ S+ ++ N +I Sbjct: 578 IRVLSLFDGIATGYLVLKELGIK--VEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 635 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 636 KRNIEEWGPFDLVIGGSPCNDLS 658 >gi|301765804|ref|XP_002918315.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 1 [Ailuropoda melanoleuca] Length = 848 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ VE + +SE+ S+ ++ N +I Sbjct: 570 IRVLSLFDGIATGYLVLKELGIK--VEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 627 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 628 KRNIEEWGPFDLVIGGSPCNDLS 650 >gi|281339306|gb|EFB14890.1| hypothetical protein PANDA_006761 [Ailuropoda melanoleuca] Length = 854 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ VE + +SE+ S+ ++ N +I Sbjct: 576 IRVLSLFDGIATGYLVLKELGIK--VEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 633 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 634 KRNIEEWGPFDLVIGGSPCNDLS 656 >gi|310830858|ref|YP_003965959.1| Modification methylase PspPI [Paenibacillus polymyxa SC2] gi|309250325|gb|ADO59891.1| Modification methylase PspPI [Paenibacillus polymyxa SC2] Length = 443 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 15/90 (16%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-------NPYSVKTYQANFPNTLIFG 54 L+ G G I + E + E + +S Y N P +++F Sbjct: 123 LRTITFCAGAG-IS---SECMKKAGFEEVAAVEWNPKEGSEDKFS-DIYLENHPESVMFN 177 Query: 55 DI--AKIKTQDIPDHDVLLAGFPCQPFSQA 82 I ++K D+P +V LA C FS+A Sbjct: 178 -IPMQQLKASDLPHAEVWLATLDCSDFSKA 206 >gi|156404009|ref|XP_001640200.1| predicted protein [Nematostella vectensis] gi|156227333|gb|EDO48137.1| predicted protein [Nematostella vectensis] Length = 336 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 10/71 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDI 56 I DLF GIG L H N + E NP++V+ + N + FGD Sbjct: 151 IVDLFAGIGYFVLPF---LVHANAAFVHACEWNPHAVEALRRNLVQNKVNEKCEVHFGDN 207 Query: 57 AKIKTQDIPDH 67 K + I DH Sbjct: 208 RKFPYKGIADH 218 >gi|47201036|emb|CAF88359.1| unnamed protein product [Tetraodon nigroviridis] Length = 234 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +++ LF GI L L+ VE + +SE+ S+ N + GD+ I Sbjct: 142 IRVLSLFDGIATGYLVLKDLGFK--VETYIASEVCEDSIAVAAVNHEGKITQVGDVRFIN 199 Query: 61 TQDI---PDHDVLLAGFPCQPFSQ 81 + + D+L+ G PC S Sbjct: 200 QEHLHRWGPFDLLIGGSPCNDLSI 223 >gi|195472313|ref|XP_002088445.1| GE18570 [Drosophila yakuba] gi|194174546|gb|EDW88157.1| GE18570 [Drosophila yakuba] Length = 331 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 5/73 (6%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDIPD--HDVL 70 + + E + +IN + Y N+ + + +I + +++ ++L Sbjct: 1 MHYAFKYA--QLEGEIVAAMDINTVANAVYAHNYGHNFVKTRNIQSLSVKEVGKLQANML 58 Query: 71 LAGFPCQPFSQAG 83 L PCQP ++ G Sbjct: 59 LMSPPCQPHTRQG 71 >gi|296088422|emb|CBI37413.3| unnamed protein product [Vitis vinifera] Length = 729 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 6/65 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DL+ G GG+ L V ++ + + + ++ + N P T + Sbjct: 170 LLDLYSGCGGMSTGLCLGAKLSCVNLVTKWALDFDKSACESLKLNHPETQ----VRNETA 225 Query: 62 QDIPD 66 +D D Sbjct: 226 EDFLD 230 Score = 37.4 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 346 DVDVICGGPPCQGIS 360 >gi|225427443|ref|XP_002267685.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1586 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 6/65 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + DL+ G GG+ L V ++ + + + ++ + N P T + Sbjct: 1027 LLDLYSGCGGMSTGLCLGAKLSCVNLVTKWALDFDKSACESLKLNHPETQ----VRNETA 1082 Query: 62 QDIPD 66 +D D Sbjct: 1083 EDFLD 1087 Score = 37.4 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 1203 DVDVICGGPPCQGIS 1217 >gi|255557861|ref|XP_002519960.1| protein with unknown function [Ricinus communis] gi|223541006|gb|EEF42564.1| protein with unknown function [Ricinus communis] Length = 734 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 12/66 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF-----FSSEINPYSVKTYQANFPNTLIFGDIAK 58 + DLF G GG+ L V C ++ + N + ++ + N P T ++ Sbjct: 164 LLDLFSGCGGMSTGL---CLGAKVSCVDLVTRWALDSNKSACESLKLNHPET----NVRN 216 Query: 59 IKTQDI 64 +D Sbjct: 217 EAAEDF 222 Score = 37.4 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 340 DVDVICGGPPCQGIS 354 >gi|83945820|ref|ZP_00958162.1| probable C-5 cytosine-specific DNA methylase [Oceanicaulis alexandrii HTCC2633] gi|83850767|gb|EAP88630.1| probable C-5 cytosine-specific DNA methylase [Oceanicaulis alexandrii HTCC2633] Length = 681 Score = 49.4 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 10/85 (11%) Query: 4 ITDLFCGIGGIRLD-LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKT 61 I D F G GG + H +V + +P +++ + N P+T F +I + Sbjct: 9 IADCFAGAGGASMGIFLALGRHPDV----AINHDPDAIRMHGVNHPDTYHFNSNIWNVDP 64 Query: 62 QD----IPDHDVLLAGFPCQPFSQA 82 D +L A C+ FS+A Sbjct: 65 DDVVRRFGPVGLLWASPDCKHFSKA 89 >gi|317489196|ref|ZP_07947714.1| DNA methyltransferase [Eggerthella sp. 1_3_56FAA] gi|325832287|ref|ZP_08165286.1| hypothetical protein HMPREF9404_4959 [Eggerthella sp. HGA1] gi|316911704|gb|EFV33295.1| DNA methyltransferase [Eggerthella sp. 1_3_56FAA] gi|325486123|gb|EGC88577.1| hypothetical protein HMPREF9404_4959 [Eggerthella sp. HGA1] Length = 261 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 24/89 (26%) Query: 2 LKITDLFCG---IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 +K+ +LF G IG + F R E FS E + ++ A + DI Sbjct: 40 MKVLELFSGTRSIG-------EAFEKRGHE-VFSVEWD----ESLPA-----DLHADIEF 82 Query: 59 IKTQDIPDH----DVLLAGFPCQPFSQAG 83 +K D+ DV+ A C FS AG Sbjct: 83 LKAPDVLRAFGRPDVVWASPDCATFSMAG 111 >gi|256383694|gb|ACU78264.1| CCTTC-recognizing Type II restriction modification system (MmyCII) adenine/cytosine DNA methyltransferase subunit [Mycoplasma mycoides subsp. capri str. GM12] gi|256384525|gb|ACU79094.1| CCTTC-recognizing Type II restriction modification system (MmyCII) adenine/cytosine DNA methyltransferase subunit [Mycoplasma mycoides subsp. capri str. GM12] gi|296455594|gb|ADH21829.1| CCTTC-recognizing Type II restriction modification system (MmyCII) adenine/cytosine DNA methyltransferase subunit [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 834 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 25/99 (25%) Query: 3 KITDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNTLIFGDI 56 LF G+G F N EC ++E+ + + N + + I GDI Sbjct: 7 TYISLFSSAGVGC------YGFKLENFECIATNELLERRLNIQKLNNKCKYDSGYIKGDI 60 Query: 57 AKIKTQDI-------------PDHDVLLAGFPCQPFSQA 82 +T+D+ DV++A PCQ S A Sbjct: 61 TLKETKDLIYNEINLWKQLGNDKVDVIIATPPCQGMSVA 99 >gi|157786471|ref|YP_001491648.1| Putative DNA methylase [Mycobacterium phage U2] gi|40769391|gb|AAR89717.1| gp77 [Mycobacterium phage U2] Length = 223 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 12/77 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKT 61 ++ DLFCG GG + H +INP Q N+ + + GD + Sbjct: 4 RLLDLFCGAGGAGRGYQLAGFHVTG-----VDINP------QPNYAGDEFVQGDALEYLD 52 Query: 62 QDIPDHDVLLAGFPCQP 78 + DV+ A PCQ Sbjct: 53 AHGHEFDVIHASPPCQS 69 >gi|71608927|emb|CAI94868.1| M1.Hin4II m5C DNA methyltransferase [Haemophilus influenzae] Length = 387 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 35/104 (33%), Gaps = 36/104 (34%) Query: 3 KITDLFC--GIGGIRLDLEQTFNHRNVECFFSSE----------INPYSVKTYQANFPNT 50 LF G+G F N EC ++E IN F + Sbjct: 6 TYISLFSSSGVGC------YGFKLENFECIATNELIERRLNVQKINKKCK------FKSG 53 Query: 51 LIFGDIAK----------IKTQDI--PDHDVLLAGFPCQPFSQA 82 I G IA+ +K I D DV++A PCQ S A Sbjct: 54 YILGSIAEEETKAKLFNEVKKWHINGKDVDVVIATPPCQGMSVA 97 >gi|119773422|ref|YP_926162.1| modification methylase (cytosine-specific methyltransferase [Shewanella amazonensis SB2B] gi|119765922|gb|ABL98492.1| modification methylase (cytosine-specific methyltransferase [Shewanella amazonensis SB2B] Length = 520 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 46/134 (34%), Gaps = 56/134 (41%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--------ANF-PNTL- 51 +++ DLF G GG+ R + S+E++P++ +T + +N PN L Sbjct: 6 IQVVDLFAGPGGLGEGFSSV--DRTFQILVSAEMDPFAHQTLRLRAFYRLISNHAPNELD 63 Query: 52 --------------------IFGD----------------------IAKIKTQDIPDHDV 69 ++ D I K +D P V Sbjct: 64 DYFAFCNGVSDKPYSSETESLWEDAGEEALQIVLGSEDGNARLDSAIKKGLNKDAPW--V 121 Query: 70 LLAGFPCQPFSQAG 83 L+ G PCQ +S G Sbjct: 122 LIGGPPCQAYSMVG 135 >gi|332858346|ref|XP_003316965.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 2 [Pan troglodytes] Length = 770 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 612 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 613 KKNIEEWGPFDLVIGGSPCNDLS 635 >gi|332858344|ref|XP_003316964.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 1 [Pan troglodytes] Length = 833 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 612 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 613 KKNIEEWGPFDLVIGGSPCNDLS 635 >gi|332858342|ref|XP_514580.3| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 5 [Pan troglodytes] Length = 853 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 575 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 632 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 633 KKNIEEWGPFDLVIGGSPCNDLS 655 >gi|332249027|ref|XP_003273664.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B [Nomascus leucogenys] Length = 868 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 590 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 647 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 648 KKNIEEWGPFDLVIGGSPCNDLS 670 >gi|297706862|ref|XP_002830246.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like, partial [Pongo abelii] Length = 751 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 473 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 530 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 531 KKNIEEWGPFDLVIGGSPCNDLS 553 >gi|297260031|ref|XP_001107440.2| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 3 [Macaca mulatta] Length = 823 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 545 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 602 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 603 KKNIEEWGPFDLVIGGSPCNDLS 625 >gi|296199844|ref|XP_002747338.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 4 [Callithrix jacchus] Length = 728 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 513 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 570 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 571 KKNIEEWGPFDLVIGGSPCNDLS 593 >gi|296199842|ref|XP_002747337.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 3 [Callithrix jacchus] Length = 770 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 612 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 613 KKNIEEWGPFDLVIGGSPCNDLS 635 >gi|296199840|ref|XP_002747336.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 2 [Callithrix jacchus] Length = 845 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 567 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 624 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 625 KKNIEEWGPFDLVIGGSPCNDLS 647 >gi|296199838|ref|XP_002747335.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 1 [Callithrix jacchus] Length = 853 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 575 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 632 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 633 KKNIEEWGPFDLVIGGSPCNDLS 655 >gi|119596756|gb|EAW76350.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_a [Homo sapiens] Length = 812 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 575 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 632 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 633 KKNIEEWGPFDLVIGGSPCNDLS 655 >gi|28559065|ref|NP_787046.1| DNA (cytosine-5)-methyltransferase 3B isoform 6 [Homo sapiens] gi|6118092|gb|AAF04015.1|AF176228_1 DNA cytosine-5 methyltransferase 3B [Homo sapiens] gi|119596762|gb|EAW76356.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_e [Homo sapiens] gi|123231673|emb|CAM27373.1| DNA (cytosine-5-)-methyltransferase 3 beta [Homo sapiens] Length = 845 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 567 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 624 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 625 KKNIEEWGPFDLVIGGSPCNDLS 647 >gi|5901940|ref|NP_008823.1| DNA (cytosine-5)-methyltransferase 3B isoform 1 [Homo sapiens] gi|17375667|sp|Q9UBC3|DNM3B_HUMAN RecName: Full=DNA (cytosine-5)-methyltransferase 3B; Short=Dnmt3b; AltName: Full=DNA methyltransferase HsaIIIB; Short=DNA MTase HsaIIIB; Short=M.HsaIIIB gi|5823168|gb|AAD53063.1|AF156488_1 DNA cytosine-5 methyltransferase 3 beta 1 [Homo sapiens] gi|18033255|gb|AAL57040.1|AF331857_1 DNA cytosine methyltransferase 3 beta [Homo sapiens] gi|5748521|emb|CAB53070.1| DNA (cytosine-5-)-methyltransferase 3 beta [Homo sapiens] gi|108752172|gb|AAI11934.1| DNMT3B protein [synthetic construct] gi|110645774|gb|AAI18503.1| DNMT3B protein [synthetic construct] gi|119596758|gb|EAW76352.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_c [Homo sapiens] gi|119596760|gb|EAW76354.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_c [Homo sapiens] gi|261857548|dbj|BAI45296.1| DNA (cytosine-5-)-methyltransferase 3 beta [synthetic construct] Length = 853 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 575 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 632 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 633 KKNIEEWGPFDLVIGGSPCNDLS 655 >gi|28559063|ref|NP_787045.1| DNA (cytosine-5)-methyltransferase 3B isoform 3 [Homo sapiens] gi|5823166|gb|AAD53062.1|AF156487_1 DNA cytosine-5 methyltransferase 3 beta 3 [Homo sapiens] gi|5748520|emb|CAB53069.1| DNA (cytosine-5-)-methyltransferase 3 beta [Homo sapiens] gi|119596757|gb|EAW76351.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_b [Homo sapiens] gi|119596759|gb|EAW76353.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_b [Homo sapiens] Length = 770 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 612 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 613 KKNIEEWGPFDLVIGGSPCNDLS 635 >gi|28559061|ref|NP_787044.1| DNA (cytosine-5)-methyltransferase 3B isoform 2 [Homo sapiens] gi|5748522|emb|CAB53071.1| DNA (cytosine-5-)-methyltransferase 3 beta [Homo sapiens] gi|119596761|gb|EAW76355.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_d [Homo sapiens] Length = 833 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 612 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 613 KKNIEEWGPFDLVIGGSPCNDLS 635 >gi|182438468|ref|YP_001826187.1| putative 5-methylcytosine methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466984|dbj|BAG21504.1| putative 5-methylcytosine methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 448 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 I DLF G GG+ + VE E + + T A T D+A++ D Sbjct: 19 IVDLFAGPGGLDIAAT-IMKDEGVESIG-VEWDDATRATRAAAGLLTTDVKDVAELGPCD 76 Query: 64 --IPDHDVLLAGFPCQPFSQAG 83 + + VL G PCQ FS AG Sbjct: 77 PSVVEATVLTGGPPCQSFSVAG 98 >gi|241997518|ref|XP_002433408.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis] gi|215490831|gb|EEC00472.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis] Length = 414 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 19/85 (22%) Query: 13 GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------------TLIFGDIAKI 59 GI LE + ++ E + + + NFP ++ G Sbjct: 14 GISCGLEAVGVS---DTLWAIESLEVAARAFSLNFPKATVFVQDCNSFLKEVLEGQETNA 70 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQ 81 K Q P + D L G PCQ +S Sbjct: 71 KGQRFPKKGEVDFLCGGPPCQGYSL 95 >gi|302785127|ref|XP_002974335.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii] gi|300157933|gb|EFJ24557.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii] Length = 773 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAK 58 + DL+CG G + L V+ ++ + N ++ + + N P T + + A+ Sbjct: 217 LLDLYCGCGAMSTGLSMGAALGGVKLVTKWAVDYNEHACNSMKYNHPETEVRNEDAE 273 >gi|192823897|ref|YP_001994815.1| gp84 [Mycobacterium phage DD5] gi|192824173|ref|YP_001994728.1| gp87 [Mycobacterium phage Lockley] gi|190610403|gb|ACE79924.1| gp87 [Mycobacterium phage Lockley] gi|190610675|gb|ACE80193.1| gp84 [Mycobacterium phage DD5] Length = 223 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 12/77 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKT 61 ++ DLFCG GG + H +INP Q N+ + + GD + Sbjct: 4 RLLDLFCGAGGAGRGYQLAGFHVTG-----VDINP------QPNYAGDEFVQGDALEYLD 52 Query: 62 QDIPDHDVLLAGFPCQP 78 + DV+ A PCQ Sbjct: 53 AHGHEFDVIHASPPCQS 69 >gi|296199846|ref|XP_002747339.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 5 [Callithrix jacchus] Length = 694 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 479 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 536 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 537 KKNIEEWGPFDLVIGGSPCNDLS 559 >gi|68655485|emb|CAJ01711.1| putative cytosine methyltransferase [Hordeum vulgare subsp. vulgare] Length = 377 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 14/86 (16%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDIA 57 + LF GIGG + L + H + S EI + + + + T + D+ Sbjct: 255 NVLSLFTGIGGGEVALHRLGIH--MRTVVSVEIGEVNRRILRGWWDQTQTGTLIEIADVK 312 Query: 58 KIKTQDIP-------DHDVLLAGFPC 76 + I D+++ G PC Sbjct: 313 SLTNDRIATFVRRFGGFDLVIGGSPC 338 >gi|307111085|gb|EFN59320.1| hypothetical protein CHLNCDRAFT_137705 [Chlorella variabilis] Length = 1369 Score = 49.0 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 37/109 (33%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI------ 59 D+F G GG+ + Q + + E + ++ N P +F + + Sbjct: 931 DIFAGCGGLSEGMHQAGAAVS---KWGIEYERPAAAAFEVNNPQAAVFCNNCNVLLHAAM 987 Query: 60 -----------------KTQDIP-----------DHDVLLAGFPCQPFS 80 T ++P + D + G PCQ +S Sbjct: 988 TKAGLEDDCDACDDAKEGTANLPSEQMAALPLPGEVDFICGGPPCQGYS 1036 >gi|296481021|gb|DAA23136.1| DNA (cytosine-5-)-methyltransferase 3 beta [Bos taurus] Length = 842 Score = 48.6 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ VE + +SE+ S+ ++ N +I Sbjct: 566 IRVLSLFDGIATGYLVLKELGIK--VEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 623 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 624 KKNIEEWGPFDLVIGGSPCNDLS 646 >gi|164448558|ref|NP_861529.2| DNA (cytosine-5)-methyltransferase 3B [Bos taurus] Length = 844 Score = 48.6 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ VE + +SE+ S+ ++ N +I Sbjct: 566 IRVLSLFDGIATGYLVLKELGIK--VEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 623 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 624 KKNIEEWGPFDLVIGGSPCNDLS 646 >gi|31074163|gb|AAP20552.1| DNA cytosine-5 methyltransferase 3b isoform 1 [Bos taurus] Length = 826 Score = 48.6 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ VE + +SE+ S+ ++ N +I Sbjct: 566 IRVLSLFDGIATGYLVLKELGIK--VEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 623 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 624 KKNIEEWGPFDLVIGGSPCNDLS 646 >gi|31074169|gb|AAP20555.1| DNA cytosine-5 methyltransferase 3b isoform 5 [Bos taurus] Length = 785 Score = 48.6 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ VE + +SE+ S+ ++ N +I Sbjct: 566 IRVLSLFDGIATGYLVLKELGIK--VEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 623 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 624 KKNIEEWGPFDLVIGGSPCNDLS 646 >gi|31074165|gb|AAP20553.1| DNA cytosine-5 methyltransferase 3b isoform 3 [Bos taurus] Length = 763 Score = 48.6 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ VE + +SE+ S+ ++ N +I Sbjct: 566 IRVLSLFDGIATGYLVLKELGIK--VEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 623 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 624 KKNIEEWGPFDLVIGGSPCNDLS 646 >gi|31074167|gb|AAP20554.1| DNA cytosine-5 methyltransferase 3b isoform 4 [Bos taurus] Length = 735 Score = 48.6 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ VE + +SE+ S+ ++ N +I Sbjct: 566 IRVLSLFDGIATGYLVLKELGIK--VEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 623 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 624 KKNIEEWGPFDLVIGGSPCNDLS 646 >gi|332858348|ref|XP_003316966.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 3 [Pan troglodytes] Length = 728 Score = 48.6 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 513 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 570 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 571 KKNIEEWGPFDLVIGGSPCNDLS 593 >gi|52345830|ref|NP_001004959.1| tRNA aspartic acid methyltransferase 1 [Xenopus (Silurana) tropicalis] gi|49523271|gb|AAH75465.1| MGC89267 protein [Xenopus (Silurana) tropicalis] Length = 379 Score = 48.6 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Query: 36 NPYSVKTYQANFPNTLIF-GDIAKIKTQDIP--DHDVLLAGFPCQPFSQAG 83 N + + Y+ NFP T ++ I + +++ D++L PCQPF++ G Sbjct: 21 NTIANEVYKYNFPYTPLWPKSIEGLSLKELDALSFDMILMSPPCQPFTRIG 71 >gi|255554887|ref|XP_002518481.1| signal transducer, putative [Ricinus communis] gi|223542326|gb|EEF43868.1| signal transducer, putative [Ricinus communis] Length = 1050 Score = 48.6 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 I DLF GIG L N + ++ E NP++V+ + N Sbjct: 866 IVDLFAGIGYFVLPF---LVRANAKLVYACEWNPHAVEALKRN 905 >gi|326800886|ref|YP_004318705.1| C-5 cytosine-specific DNA methylase [Sphingobacterium sp. 21] gi|326551650|gb|ADZ80035.1| C-5 cytosine-specific DNA methylase [Sphingobacterium sp. 21] Length = 531 Score = 48.6 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 3/85 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAK 58 L +TD FCG GG + + + +E + ++ T+ NFP+T+ D++ Sbjct: 6 LTVTDQFCGAGGNSQAVRRYAEKCNGGIEVTLAMNHWKLAIDTHNTNFPDTMHACTDVSA 65 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83 + P ++L+ C S AG Sbjct: 66 CDPRRFPTTNILITSPECTTHSPAG 90 >gi|188581976|ref|YP_001925421.1| C-5 cytosine-specific DNA methylase [Methylobacterium populi BJ001] gi|179345474|gb|ACB80886.1| C-5 cytosine-specific DNA methylase [Methylobacterium populi BJ001] Length = 668 Score = 48.6 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 7/85 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 + DL CG GG ++ +E + P ++ T++ N P + DIA ++ Sbjct: 20 VADLLCGAGGSSTGCQRALAELGLEMELVCVNHW-PVAIATHERNHPAARHYVQDIATVR 78 Query: 61 TQDI-PD--HDVLLAGFPCQPFSQA 82 + P+ D+L+A C S A Sbjct: 79 PHLLVPEGYLDLLMASPTCTHHSVA 103 >gi|83648364|ref|YP_436799.1| site-specific DNA methylase [Hahella chejuensis KCTC 2396] gi|83636407|gb|ABC32374.1| Site-specific DNA methylase [Hahella chejuensis KCTC 2396] Length = 327 Score = 48.6 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 8/86 (9%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 M DLFCG GG + + + +V+TYQANFP +I I Sbjct: 1 MPTFVDLFCG-GGFG---ARGAVRGGGKPLLGIDAWDLAVQTYQANFPTAEVIHSKIEDT 56 Query: 60 KTQDIP---DHDVLLAGFPCQPFSQA 82 + DVLL C S A Sbjct: 57 DPILLAKKFKPDVLLTSPECTSHSIA 82 >gi|291388726|ref|XP_002710853.1| PREDICTED: DNA cytosine-5 methyltransferase 3 beta isoform 3 [Oryctolagus cuniculus] Length = 796 Score = 48.6 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ VE + +SE+ S+ ++ N +I Sbjct: 581 IRVLSLFDGIATGYLVLKELGIK--VEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 638 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K + D+++ G PC S Sbjct: 639 KKNIDEWGPFDLVIGGSPCNDLS 661 >gi|291388724|ref|XP_002710852.1| PREDICTED: DNA cytosine-5 methyltransferase 3 beta isoform 2 [Oryctolagus cuniculus] Length = 859 Score = 48.6 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ VE + +SE+ S+ ++ N +I Sbjct: 581 IRVLSLFDGIATGYLVLKELGIK--VEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 638 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K + D+++ G PC S Sbjct: 639 KKNIDEWGPFDLVIGGSPCNDLS 661 >gi|291388722|ref|XP_002710851.1| PREDICTED: DNA cytosine-5 methyltransferase 3 beta isoform 1 [Oryctolagus cuniculus] Length = 776 Score = 48.6 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ VE + +SE+ S+ ++ N +I Sbjct: 561 IRVLSLFDGIATGYLVLKELGIK--VEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 618 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K + D+++ G PC S Sbjct: 619 KKNIDEWGPFDLVIGGSPCNDLS 641 >gi|225684039|gb|EEH22323.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb03] Length = 1336 Score = 48.6 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 20/96 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L+ ++F G G LE+ RN ++ E + TY+AN + L G + Sbjct: 760 LRALNIFSGGGSFDRGLEEGGAIRNE---WAVEWELAPMLTYRANQHDPERVKLFLGSVN 816 Query: 58 KI-------KTQD------IPDHDVLLAGFPCQPFS 80 K++D + D + + AG PCQ +S Sbjct: 817 DFLLRAFQGKSEDNNLVAKLGDVEFISAGSPCQGYS 852 >gi|94986833|ref|YP_594766.1| modification methylase BepI (cytosine-specific methyltransferase BepI) [Lawsonia intracellularis PHE/MN1-00] gi|94731082|emb|CAJ54445.1| Modification methylase BepI (Cytosine-specific methyltransferase BepI) [Lawsonia intracellularis PHE/MN1-00] Length = 294 Score = 48.6 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Query: 46 NFPNTLIFGDIAKIKTQDI--PDHDVLLAGFPCQPFSQAG 83 NF T IA + ++ P ++++ GFPCQ FS AG Sbjct: 11 NFTGTFQLKSIADLLNENFQFPKANLVIGGFPCQDFSVAG 50 >gi|229008070|ref|ZP_04165613.1| Phage-related DNA methylase [Bacillus mycoides Rock1-4] gi|228753185|gb|EEM02680.1| Phage-related DNA methylase [Bacillus mycoides Rock1-4] Length = 184 Score = 48.6 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 16/25 (64%) Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82 +++++IP DV GFPCQ S A Sbjct: 7 DVRSEEIPKADVWCFGFPCQDISIA 31 >gi|332858350|ref|XP_003316967.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 4 [Pan troglodytes] Length = 694 Score = 48.6 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 479 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 536 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 537 KKNIEEWGPFDLVIGGSPCNDLS 559 >gi|186684463|ref|YP_001867659.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] gi|14594706|gb|AAK68641.1| cytosine-specific DNA methyltransferase [Nostoc punctiforme PCC 73102] gi|186466915|gb|ACC82716.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102] Length = 413 Score = 48.6 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 35/105 (33%), Gaps = 29/105 (27%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-NPY-SVKTYQA---NFP------NTLI 52 I F G G + L E + +EI +P+ + +Y N P + Sbjct: 7 IFSFFAGSGFLDLGFE----TSGFNIVYVNEIFSPFMAAYSYSRQILNLPLPEYGYHHGE 62 Query: 53 FGDIAKIK----TQDIPD----------HDVLLAGFPCQPFSQAG 83 GD+ ++ Q + + + G PC FS G Sbjct: 63 IGDVTQLHEGLQAQHLRELVQDCRKSNNIVGFIGGPPCPDFSIGG 107 >gi|193785499|dbj|BAG50865.1| unnamed protein product [Homo sapiens] Length = 489 Score = 48.6 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF GI L L++ +SE+ S+ ++ N +I Sbjct: 274 IRVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 331 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 332 KKNIEEWGPFDLVIGGSPCNDLS 354 >gi|195035415|ref|XP_001989173.1| GH11576 [Drosophila grimshawi] gi|193905173|gb|EDW04040.1| GH11576 [Drosophila grimshawi] Length = 327 Score = 48.6 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 5/73 (6%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDIP--DHDVL 70 + + E + ++N + Y N+ T + +I + +++ + +VL Sbjct: 1 MHYAFKYA--QLPGEVVAALDVNTVANAVYVHNYGTTHLKTRNIQSLSEKEVRQLNANVL 58 Query: 71 LAGFPCQPFSQAG 83 L PCQP ++ G Sbjct: 59 LMSPPCQPHTRQG 71 >gi|298253558|ref|ZP_06977348.1| site-specific DNA methylase [Gardnerella vaginalis 5-1] gi|297532325|gb|EFH71213.1| site-specific DNA methylase [Gardnerella vaginalis 5-1] Length = 317 Score = 48.6 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 6/45 (13%) Query: 45 ANFPNT-LIFGDIAKIKTQDI-----PDHDVLLAGFPCQPFSQAG 83 N T ++ GDI + + DV++ G PCQ FSQ G Sbjct: 2 KNHKTTKMVVGDITSLDLDAVFGTYKNKIDVIIGGPPCQGFSQKG 46 >gi|326514650|dbj|BAJ96312.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 600 Score = 48.2 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 14/86 (16%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDIA 57 + LF GIGG + L + H + S EI + + + + T + D+ Sbjct: 478 NVLSLFTGIGGGEVALHRLGIH--MRTVVSVEIGEVNRRILRGWWDQTQTGTLIEIADVK 535 Query: 58 KIKTQDIP-------DHDVLLAGFPC 76 + I D+++ G PC Sbjct: 536 SLTNDRIATFVRRFGGFDLVIGGSPC 561 >gi|218556814|ref|YP_002389728.1| putative modification methylase NmeDIP [Escherichia coli IAI1] gi|218363583|emb|CAR01240.1| putative modification methylase NmeDIP [Escherichia coli IAI1] Length = 379 Score = 48.2 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 31/98 (31%), Gaps = 22/98 (22%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------FGD 55 I F G G + L E+ E F +E + + Y+ + I Sbjct: 8 IFSFFSGSGFLDLGFEK----NGYEVVFVNEYHAPFMDAYKHSRKKLNIAPPRFGYAECS 63 Query: 56 IAKIKTQDIPD----------HDVLLAGFPCQPFSQAG 83 I ++ + I + G PC FS AG Sbjct: 64 IEDVEHEKIKSSMLQLKNEGRLTGFIGGPPCPDFSVAG 101 >gi|295664785|ref|XP_002792944.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb01] gi|226278465|gb|EEH34031.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb01] Length = 1371 Score = 48.2 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 28/100 (28%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--------------- 46 L+ ++F G G LE+ RN ++ E + TY+AN Sbjct: 795 LRALNIFSGGGSFDRGLEEGGAIRNE---WAVEWELAPMLTYRANQHDPERVKLFLGSVN 851 Query: 47 ------FPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80 F D+ + D + + AG PCQ +S Sbjct: 852 DFLLRAFQGNTEANDL----VAKLGDVEFISAGSPCQGYS 887 >gi|325137454|gb|EGC60041.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis ES14902] Length = 334 Score = 48.2 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 13/77 (16%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP-------- 65 + ++ ++ + P +TY+AN I D+ +++ + + Sbjct: 1 MSYGMQSA----GIQVLAGIDYEPSCKETYEANINAKFIQADVFELQPETLEKELGLKKN 56 Query: 66 DHD-VLLAGFPCQPFSQ 81 D D +L+ PCQ +S Sbjct: 57 DDDLILIGCSPCQYWSV 73 >gi|297841705|ref|XP_002888734.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata] gi|297334575|gb|EFH64993.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata] Length = 838 Score = 48.2 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 25/64 (39%), Gaps = 6/64 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + DL+ G G + L + ++ ++N ++ K+ N P T + + Sbjct: 270 TLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLGHNHPETH----VRNMS 325 Query: 61 TQDI 64 +D Sbjct: 326 AEDF 329 Score = 34.7 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 8/14 (57%) Query: 67 HDVLLAGFPCQPFS 80 DV+ G PCQ S Sbjct: 451 VDVVCGGPPCQGIS 464 >gi|291525787|emb|CBK91374.1| hypothetical protein EUR_23870 [Eubacterium rectale DSM 17629] Length = 85 Score = 48.2 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 23/77 (29%) Query: 2 LKITDLFCG---IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 +K+ +LF G IG + F R E FS E + F N ++ DI+K Sbjct: 1 MKVLELFAGTRSIG-------KAFEQRGHE-VFSVEWSKD--------FENIDLYEDISK 44 Query: 59 IKTQDI----PDHDVLL 71 + +DI DV+ Sbjct: 45 VTAEDILKLFGKPDVIC 61 >gi|300717794|ref|YP_003742597.1| C-5 cytosine-specific DNA methylase [Erwinia billingiae Eb661] gi|299063630|emb|CAX60750.1| C-5 cytosine-specific DNA methylase [Erwinia billingiae Eb661] Length = 236 Score = 48.2 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 12/66 (18%) Query: 27 VECFFSSEINPYSVKTY--QAN------FPNTLIFGDIAKIKTQDIPD-HDVLLAGFPCQ 77 + E + Y+ + + N FP I+ DI + D++ GFPCQ Sbjct: 22 WRTVCAVERDAYAAQVLAQRQNDRCLRPFP---IWSDICSFDGKPWRGIVDIVSGGFPCQ 78 Query: 78 PFSQAG 83 S AG Sbjct: 79 DISSAG 84 >gi|218247299|ref|YP_002372670.1| Site-specific DNA methylase-like protein [Cyanothece sp. PCC 8801] gi|257061366|ref|YP_003139254.1| Site-specific DNA methylase-like protein [Cyanothece sp. PCC 8802] gi|218167777|gb|ACK66514.1| Site-specific DNA methylase-like protein [Cyanothece sp. PCC 8801] gi|256591532|gb|ACV02419.1| Site-specific DNA methylase-like protein [Cyanothece sp. PCC 8802] Length = 83 Score = 48.2 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 6/66 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 +K LF G G L L Q + ++EI + ++ N+P+T +I G I K Sbjct: 16 MKAISLFSGGGIGDLALGQA----GFKVVVANEILEDRAEVFRYNYPDTNMIIGQIIK-N 70 Query: 61 TQDIPD 66 +I D Sbjct: 71 ISEILD 76 >gi|167515786|ref|XP_001742234.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778858|gb|EDQ92472.1| predicted protein [Monosiga brevicollis MX1] Length = 356 Score = 48.2 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Query: 42 TYQANFPNTLIFG-DIAKIKTQDIPD--HDVLLAGFPCQPFSQAG 83 YQAN P+TLI +I + + + D+ L PCQP+S+ G Sbjct: 1 VYQANHPDTLIKNRNIQAVPIRQLEKLAADLWLMSPPCQPYSRQG 45 >gi|119513472|ref|ZP_01632497.1| cytosine-specific DNA methyltransferase [Nodularia spumigena CCY9414] gi|119461873|gb|EAW42885.1| cytosine-specific DNA methyltransferase [Nodularia spumigena CCY9414] Length = 400 Score = 48.2 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 29/105 (27%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-----------NTLI 52 I F G G + L E + + +EI +K Y+ + + Sbjct: 7 IFSFFSGSGFLDLGFE----NSGFNIVYVNEIFKPFMKAYRYSREILKLPQPEYGYHEGE 62 Query: 53 FGDIAKIKT-----------QDIPDHD-VL--LAGFPCQPFSQAG 83 D++K+ T +D D ++ + G PC FS G Sbjct: 63 AADVSKLITGTEGQRLHELVKDCRKSDHIIGFIGGPPCPDFSVGG 107 >gi|224076221|ref|XP_002304908.1| predicted protein [Populus trichocarpa] gi|222847872|gb|EEE85419.1| predicted protein [Populus trichocarpa] Length = 1031 Score = 48.2 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 I DLF GIG L + ++ E NP++V+ + N Sbjct: 875 IVDLFAGIGYFTLPF---LVRAKAKLVYACEWNPHAVEALRRN 914 >gi|239931046|ref|ZP_04687999.1| putative 5-methylcytosine methyltransferase [Streptomyces ghanaensis ATCC 14672] Length = 345 Score = 48.2 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 8/76 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 D+ G GG+ LE + P + +T AN P ++ D+ + Sbjct: 7 FVDVCAGAGGLASGLESA----GFSPALLLDNKPQACETLLANRPQWNVVCEDLIDFLPE 62 Query: 63 DIP---DHDVLLAGFP 75 + P D D+L AG P Sbjct: 63 EHPEVLDVDLLSAGLP 78 >gi|15678523|ref|NP_275638.1| modification methyltransferase, cytosine-specific [Methanothermobacter thermautotrophicus str. Delta H] gi|2621566|gb|AAB85001.1| modification methyltransferase, cytosine-specific [Methanothermobacter thermautotrophicus str. Delta H] Length = 413 Score = 48.2 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 52/128 (40%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ----ANF---------PNT 50 + D+F G GG+ ++ + E++ +++T + + Sbjct: 6 LIDIFAGAGGLTEGFLRS----DYTFVSHIEMDRDAIQTLETRGLYHHLQSDGDPEDYTE 61 Query: 51 LIFGDI-AKIKTQDIPDHD----------------------------------VLLAGFP 75 + G+I + + PD D ++ G P Sbjct: 62 YVNGEIGREELFRRYPDFDSELYMNLELTEENVDRVIETIRSKMNDMGTVSVDGIIGGPP 121 Query: 76 CQPFSQAG 83 CQ +S AG Sbjct: 122 CQAYSYAG 129 >gi|255089038|ref|XP_002506441.1| SNF2 super family [Micromonas sp. RCC299] gi|226521713|gb|ACO67699.1| SNF2 super family [Micromonas sp. RCC299] Length = 2616 Score = 48.2 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 11/70 (15%) Query: 22 FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----------DIP-DHDVL 70 V+ FS EI P+ + NF ++F DI ++ D+P + D+L Sbjct: 300 GQKLGVDHVFSCEIEPFKQAYIERNFAPPILFRDIRELDGDQATTAYGALVDVPGNVDML 359 Query: 71 LAGFPCQPFS 80 +AG C +S Sbjct: 360 VAGTSCVDYS 369 >gi|196019887|ref|XP_002119062.1| hypothetical protein TRIADDRAFT_63030 [Trichoplax adhaerens] gi|190577119|gb|EDV18452.1| hypothetical protein TRIADDRAFT_63030 [Trichoplax adhaerens] Length = 140 Score = 48.2 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 38/133 (28%), Gaps = 54/133 (40%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-------------------- 42 KI DLF G GG+ E S+E++ ++ T Sbjct: 5 KIVDLFAGPGGLGEGF--LSLKDAFEICVSAEMDTHARSTLRLRSFYRMLRNERADCLSD 62 Query: 43 ------------YQANFPN----------TLIFGDI-------AKIKTQDIPDHD---VL 70 Y N + + G I +I + D VL Sbjct: 63 YYDYCNGITETAYSKNTYDLWEKSGEEARRIELGSIEGNKELRTRISLSGLDSDDKKWVL 122 Query: 71 LAGFPCQPFSQAG 83 + G PCQ +S G Sbjct: 123 IGGPPCQAYSLVG 135 >gi|302818367|ref|XP_002990857.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii] gi|300141418|gb|EFJ08130.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii] Length = 933 Score = 47.8 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAK 58 + DL+CG G + L V ++ + N ++ + + N P T + + A+ Sbjct: 370 LLDLYCGCGAMSTGLSMGAALGGVNLVTKWAVDYNEHACNSMKYNHPETEVRNEDAE 426 >gi|219871979|ref|YP_002476354.1| moodification methylase HgaIA [Haemophilus parasuis SH0165] gi|219692183|gb|ACL33406.1| moodification methylase HgaIA (M.HgaIA) (Cytosine-specific methyltransferase HgaIA) (M.HgaI-1) [Haemophilus parasuis SH0165] Length = 358 Score = 47.8 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%) Query: 2 LKI--TDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDI 56 +KI LF GIG + L + N+ ++E+ TYQ +P T +F GDI Sbjct: 1 MKINAMSLFSSAGIGELDL------HKGNLNFVVANELLKKRADTYQFFYPETKMFQGDI 54 Query: 57 AKIKTQ-DI------PDHDVLLAGFPCQPFSQAG 83 + K + +I + LLA PCQ S G Sbjct: 55 SDEKLKREILLSAQQNNVQFLLATPPCQGLSSVG 88 >gi|302690426|ref|XP_003034892.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8] gi|300108588|gb|EFI99989.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8] Length = 1412 Score = 47.8 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 29/82 (35%), Gaps = 26/82 (31%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIF------------GD--IAKIKTQDIP------- 65 V+ + + P +V TY+ N P T + GD + Q P Sbjct: 948 VDTALAVDYEPAAVDTYKKNHPYTTVLCADSNKVLKAVRGDKSVKDEYNQPFPPLPKPCT 1007 Query: 66 -----DHDVLLAGFPCQPFSQA 82 D + G PCQ FS+A Sbjct: 1008 ADKSSSIDFVFGGPPCQSFSKA 1029 >gi|54027887|ref|YP_122127.1| putative DNA methyltransferase [Nocardia farcinica IFM 10152] gi|54019395|dbj|BAD60763.1| putative DNA methyltransferase [Nocardia farcinica IFM 10152] Length = 541 Score = 47.8 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKIKTQDIP 65 F G GG L E+ +E ++ NP V+ + NFP+ L GD+ I +P Sbjct: 14 FAGWGGDSLGWEEV---PGIELRLAANHNPVCVEVHTLNFPDAEHLPPGDVEAIDLATLP 70 Query: 66 DHDVLLAGFPCQPFSQA 82 ++ A C ++ A Sbjct: 71 YTELFWASPACPAWTDA 87 >gi|302144138|emb|CBI23243.3| unnamed protein product [Vitis vinifera] Length = 1013 Score = 47.8 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 I DLF GIG L + ++ E NP++V+ Q N Sbjct: 855 IVDLFAGIGYFVLPF---LVSAKAKLVYACEWNPHAVEALQHN 894 >gi|225444519|ref|XP_002268884.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1018 Score = 47.8 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 I DLF GIG L + ++ E NP++V+ Q N Sbjct: 860 IVDLFAGIGYFVLPF---LVSAKAKLVYACEWNPHAVEALQHN 899 >gi|189192548|ref|XP_001932613.1| DNA methyltransferase Dim-2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187974219|gb|EDU41718.1| DNA methyltransferase Dim-2 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1102 Score = 47.8 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 18/94 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 L+ +F G G + LE+ V+ + + + + T +AN + + G + Sbjct: 655 LRGLSIFSGGGSLDRGLEEGGA---VKIHTAVDFSAEACHTQRANAQDPENLHIYCGSVD 711 Query: 58 KI--------KTQDIP---DHDVLLAGFPCQPFS 80 + IP + D+++AG PC FS Sbjct: 712 DYLDTVLRGKDQKFIPRVGEVDLIVAGSPCPGFS 745 >gi|260871192|ref|YP_003237972.1| putative DNA methyltransferase [Escherichia coli O111:H- str. 11128] gi|257767771|dbj|BAI39264.1| probable DNA methyltransferase [Escherichia coli O111:H- str. 11128] Length = 1013 Score = 47.8 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 8/73 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----D 63 GI + + + +EI P+ +P+ GD+ K+ + + Sbjct: 10 CSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLALRWPHVANLGDMKKLAKKVLAGE 65 Query: 64 IPDHDVLLAGFPC 76 I DVL+ G PC Sbjct: 66 IESPDVLVGGTPC 78 >gi|258515662|ref|YP_003191884.1| hypothetical protein Dtox_2452 [Desulfotomaculum acetoxidans DSM 771] gi|257779367|gb|ACV63261.1| hypothetical protein Dtox_2452 [Desulfotomaculum acetoxidans DSM 771] Length = 177 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 34/110 (30%), Gaps = 33/110 (30%) Query: 2 LKITDLFCGIGGIRLDLEQTF-NHRN----VECFFSSE-------------------INP 37 + F GIGG L ++++ +R E + I+ Sbjct: 20 YTVVHFFAGIGGGALGMQKSMVEYRGLLGKFETIVGIDCDREACQDFEMITGVPAACIDL 79 Query: 38 YSVKTYQANFPNTLIFG-------DIAKIKTQDIPDHDVLLAGFPCQPFS 80 +S K Y A + G DI P V+ PC+ FS Sbjct: 80 FSRKDYIAYHGHEPPLGWQEATAEDIRNATRGIYPS--VIFMSPPCKGFS 127 >gi|324111159|gb|EGC05144.1| DNA adenine methylase [Escherichia fergusonii B253] Length = 1095 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 8/73 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----D 63 GI + + + +E P+ +P+ GD+ K+ + + Sbjct: 10 CSGI----EAASIAWEPLGMRPAWFAETEPFPSAVLAHRWPHVANLGDMTKLAIKVLAGE 65 Query: 64 IPDHDVLLAGFPC 76 I DVL+ G PC Sbjct: 66 IESPDVLVGGTPC 78 >gi|297683586|ref|XP_002819452.1| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog [Pongo abelii] Length = 448 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 20/90 (22%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 238 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDN 294 Query: 57 AKIKTQDIPDHDVLLA-------GFP--CQ 77 K+K +I D V+L G+P CQ Sbjct: 295 RKLKLSNIADR-VILGLIPSSEEGWPIACQ 323 >gi|297300061|ref|XP_001101713.2| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog [Macaca mulatta] Length = 505 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 20/90 (22%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 238 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDN 294 Query: 57 AKIKTQDIPDHDVLLA-------GFP--CQ 77 K+K +I D V+L G+P CQ Sbjct: 295 RKLKLSNIADR-VILGLIPSSEEGWPIACQ 323 >gi|296227242|ref|XP_002759290.1| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog [Callithrix jacchus] Length = 448 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 20/90 (22%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 238 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDN 294 Query: 57 AKIKTQDIPDHDVLLA-------GFP--CQ 77 K+K +I D V+L G+P CQ Sbjct: 295 RKLKLSNIADR-VILGLLPSSEEGWPIACQ 323 >gi|157098465|gb|AAH03057.2| TRMT12 protein [Homo sapiens] Length = 366 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 20/90 (22%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 229 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDN 285 Query: 57 AKIKTQDIPDHDVLLA-------GFP--CQ 77 K+K +I D V+L G+P CQ Sbjct: 286 RKLKLSNIADR-VILGLIPSSEEGWPIACQ 314 >gi|143679771|sp|Q4R3U8|TYW2_MACFA RecName: Full=tRNA wybutosine-synthesizing protein 2 homolog; Short=tRNA-yW-synthesizing protein 2; AltName: Full=Alpha-amino-alpha-carboxypropyl transferase TYW2 Length = 448 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 20/90 (22%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 238 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDN 294 Query: 57 AKIKTQDIPDHDVLLA-------GFP--CQ 77 K+K +I D V+L G+P CQ Sbjct: 295 RKLKLSNIADR-VILGLIPSSEEGWPIACQ 323 >gi|114621593|ref|XP_519945.2| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog [Pan troglodytes] Length = 448 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 20/90 (22%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 238 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDN 294 Query: 57 AKIKTQDIPDHDVLLA-------GFP--CQ 77 K+K +I D V+L G+P CQ Sbjct: 295 RKLKLSNIADR-VILGLIPSSEEGWPIACQ 323 >gi|67971752|dbj|BAE02218.1| unnamed protein product [Macaca fascicularis] Length = 505 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 20/90 (22%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 238 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDN 294 Query: 57 AKIKTQDIPDHDVLLA-------GFP--CQ 77 K+K +I D V+L G+P CQ Sbjct: 295 RKLKLSNIADR-VILGLIPSSEEGWPIACQ 323 >gi|157388919|ref|NP_060426.2| tRNA wybutosine-synthesizing protein 2 homolog [Homo sapiens] gi|74726289|sp|Q53H54|TYW2_HUMAN RecName: Full=tRNA wybutosine-synthesizing protein 2 homolog; Short=tRNA-yW-synthesizing protein 2; AltName: Full=Alpha-amino-alpha-carboxypropyl transferase TYW2 gi|62897013|dbj|BAD96447.1| hypothetical protein FLJ20772 variant [Homo sapiens] gi|119612468|gb|EAW92062.1| tRNA methyltranferase 12 homolog (S. cerevisiae) [Homo sapiens] Length = 448 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 20/90 (22%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 238 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDN 294 Query: 57 AKIKTQDIPDHDVLLA-------GFP--CQ 77 K+K +I D V+L G+P CQ Sbjct: 295 RKLKLSNIADR-VILGLIPSSEEGWPIACQ 323 >gi|15079819|gb|AAH11713.1| TRNA methyltransferase 12 homolog (S. cerevisiae) [Homo sapiens] Length = 448 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 20/90 (22%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 238 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDN 294 Query: 57 AKIKTQDIPDHDVLLA-------GFP--CQ 77 K+K +I D V+L G+P CQ Sbjct: 295 RKLKLSNIADR-VILGLIPSSEEGWPIACQ 323 >gi|7021077|dbj|BAA91374.1| unnamed protein product [Homo sapiens] Length = 448 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 20/90 (22%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 238 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDN 294 Query: 57 AKIKTQDIPDHDVLLA-------GFP--CQ 77 K+K +I D V+L G+P CQ Sbjct: 295 RKLKLSNIADR-VILGLIPSSEEGWPIACQ 323 >gi|22328346|ref|NP_567268.2| Met-10+ like family protein / kelch repeat-containing protein [Arabidopsis thaliana] gi|75162488|sp|Q8W4K1|TYW23_ARATH RecName: Full=tRNA wybutosine-synthesizing protein 2/3/4; Includes: RecName: Full=tRNA wybutosine-synthesizing protein 3 homolog; Includes: RecName: Full=tRNA wybutosine synthesizing protein 2 homolog gi|17064868|gb|AAL32588.1| Unknown protein [Arabidopsis thaliana] gi|30725408|gb|AAP37726.1| At4g04670 [Arabidopsis thaliana] gi|332657010|gb|AEE82410.1| tRNA wybutosine synthesizing protein 2-like protein [Arabidopsis thaliana] Length = 995 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF GIG L + ++ E NP++++ + N Sbjct: 841 VVDLFAGIGYFVLPF---LVRAKAKLVYACEWNPHAIEALRRN 880 >gi|5732053|gb|AAD48952.1|AF149414_1 contains similarity to Pfam family PF00145 (C-5 cytosine-specific DNA methylase); score=10.4. E=0.051, N=1 [Arabidopsis thaliana] gi|7267225|emb|CAB80832.1| AT4g04670 [Arabidopsis thaliana] Length = 977 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF GIG L + ++ E NP++++ + N Sbjct: 841 VVDLFAGIGYFVLPF---LVRAKAKLVYACEWNPHAIEALRRN 880 >gi|300702384|ref|YP_003743984.1| cytosine-specific methyltransferase [Ralstonia solanacearum CFBP2957] gi|299070045|emb|CBJ41330.1| putative cytosine-specific methyltransferase [Ralstonia solanacearum CFBP2957] Length = 438 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 35/105 (33%), Gaps = 31/105 (29%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60 L+ D+F L + F+ E +P + +T + N LI G K Sbjct: 7 LRFADVFA----GCGGLSLGLLEAGCQGVFAIERSPLAFETLRHN----LIDGKQHKFDW 58 Query: 61 TQDIPD----------------------HDVLLAGFPCQPFSQAG 83 +P D+++ G PCQ FS AG Sbjct: 59 PNWLPKEAMTCEDLLFRHGAQLDGIKGAIDLIVGGPPCQGFSTAG 103 >gi|329851058|ref|ZP_08265815.1| modification methylase HphIA [Asticcacaulis biprosthecum C19] gi|328839904|gb|EGF89476.1| modification methylase HphIA [Asticcacaulis biprosthecum C19] Length = 557 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 40/130 (30%), Gaps = 50/130 (38%) Query: 4 ITDLFCGIGGIRLDLEQTFNHR----NVECFFSSEINPYSVKTYQAN-FPNTLIFGDI-- 56 D+F G GG+ + + + E + E +P +V+T + F GD+ Sbjct: 11 FIDIFAGPGGLSEGFSRFAEFQQSNVSFESRLAIEKDPIAVQTLRLRSFFRQFAPGDVPD 70 Query: 57 -------AKIKTQDIPDH------D------------------------------VLLAG 73 K Q + +H D VLL G Sbjct: 71 EYYEVLRRKSSIQTLSEHAKWQSADDHVWQAELGIVEETELHQKLSERLGGASDWVLLGG 130 Query: 74 FPCQPFSQAG 83 PCQ +S G Sbjct: 131 PPCQAYSLMG 140 >gi|325495666|gb|EGC93530.1| putative DNA methyltransferase [Escherichia fergusonii ECD227] Length = 1013 Score = 47.8 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 8/73 (10%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----D 63 GI + + + +E P+ +P+ GD+ K+ + + Sbjct: 10 CSGI----EAASIAWEPLGMRPAWFAETEPFPSAVLAHRWPHVANLGDMTKLAIKVLAGE 65 Query: 64 IPDHDVLLAGFPC 76 I DVL+ G PC Sbjct: 66 IESPDVLVGGTPC 78 >gi|170731368|ref|YP_001763315.1| C-5 cytosine-specific DNA methylase [Burkholderia cenocepacia MC0-3] gi|169814610|gb|ACA89193.1| C-5 cytosine-specific DNA methylase [Burkholderia cenocepacia MC0-3] Length = 333 Score = 47.4 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 35/98 (35%), Gaps = 32/98 (32%) Query: 1 MLKITDLFCGIGGIR------------LDLEQTFNHRNVECFFSSEINPYSVKTYQANFP 48 M DLFCG GG+ L L+ + + KTY+ANFP Sbjct: 1 MATFVDLFCG-GGLGARGAVRGGGVPLLGLDA--------------WD-LATKTYEANFP 44 Query: 49 NTLIFGD-IAKIKTQDIPDH---DVLLAGFPCQPFSQA 82 + + D I + + DVLL C S A Sbjct: 45 SADVITDFIENVDAAALGRRYRPDVLLTSPECTSHSIA 82 >gi|75152372|sp|Q8H4D4|TYW23_ORYSJ RecName: Full=tRNA wybutosine-synthesizing protein 2/3/4; Includes: RecName: Full=tRNA wybutosine-synthesizing protein 3 homolog; Includes: RecName: Full=tRNA wybutosine synthesizing protein 2 homolog gi|23616996|dbj|BAC20692.1| MET-10+related protein-like [Oryza sativa Japonica Group] Length = 1043 Score = 47.4 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF GIG L N + ++ E NP++++ Q N Sbjct: 887 VVDLFAGIGYFVLPF---LVKANAKLVYACEWNPHALEALQRN 926 >gi|239981227|ref|ZP_04703751.1| hypothetical protein SalbJ_17454 [Streptomyces albus J1074] gi|291453090|ref|ZP_06592480.1| gp77 [Streptomyces albus J1074] gi|291356039|gb|EFE82941.1| gp77 [Streptomyces albus J1074] Length = 218 Score = 47.4 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 16/82 (19%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK---- 58 ++ DL CG GG+ + ++ + ++NP Q N+P T D Sbjct: 14 RVLDLCCGAGGLSMG----YHLAGFDVTG-VDLNP------QPNYPFTFHQADALTYLAD 62 Query: 59 -IKTQDIPDHDVLLAGFPCQPF 79 I T I + D++ A +PCQ F Sbjct: 63 LITTGRIHNFDLVHASWPCQHF 84 >gi|149432729|ref|XP_001519246.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase 3 beta [Ornithorhynchus anatinus] Length = 640 Score = 47.4 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK--TYQA--NFPNTLIFGDIA 57 +++ LF GI L L+ V+ + +SEI S+ T + N +I Sbjct: 408 IRVLSLFDGIATGYLVLKDLGIK--VDKYVASEICEDSIALGTVRHEGNIEYVHDVRNIT 465 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K + D+++ G PC S Sbjct: 466 KRHIDEWGPFDLVIGGSPCNDLS 488 >gi|222637134|gb|EEE67266.1| hypothetical protein OsJ_24443 [Oryza sativa Japonica Group] Length = 1083 Score = 47.4 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF GIG L N + ++ E NP++++ Q N Sbjct: 927 VVDLFAGIGYFVLPF---LVKANAKLVYACEWNPHALEALQRN 966 >gi|220672863|emb|CAX14547.1| DNA (cytosine-5-)-methyltransferase 8 [Danio rerio] gi|220673212|emb|CAX13544.1| DNA (cytosine-5-)-methyltransferase 8 [Danio rerio] Length = 852 Score = 47.4 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKT-YQANFPNTLIFGDIAK 58 +++ LF GI L ++ + +SE+ S+ +F GDI Sbjct: 575 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYVASEVCEDSITVGMVRHFERITYVGDIRN 630 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 I + I + D+++ G PC S Sbjct: 631 ITRKHIQEWGPFDLVIGGSPCNDLSI 656 >gi|195350999|ref|XP_002042024.1| GM26726 [Drosophila sechellia] gi|194123848|gb|EDW45891.1| GM26726 [Drosophila sechellia] Length = 330 Score = 47.4 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 33/73 (45%), Gaps = 5/73 (6%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDIPD--HDVL 70 + + + E + ++N + Y+ N+ + L+ +I + +++ ++L Sbjct: 1 MHYAFKYA--QLDGEIVAALDVNTVANAVYEHNYGSNLVKTRNIQSLSVKEVTKLQANML 58 Query: 71 LAGFPCQPFSQAG 83 L PCQP ++ G Sbjct: 59 LMSPPCQPHTRQG 71 >gi|239622763|ref|ZP_04665794.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239514760|gb|EEQ54627.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 507 Score = 47.4 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 37/140 (26%), Gaps = 60/140 (42%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKTYQ---------------- 44 I DLF G GG+ + + S E+ + T + Sbjct: 6 IIDLFAGPGGLGEGFSSLKDPAGNPIFQICMSVEMEKNAHDTLRLRSFVRKIMKSDGQLP 65 Query: 45 ------------ANF-------------------PNTLIFGDIAKIK-TQDIPDH---D- 68 NF TL+ GD + +D D Sbjct: 66 KSYLNYLDNPSAYNFQAMQLEYPDKWAAADEEAVQGTLVEGDDTFVNMAKDKLKARCGDN 125 Query: 69 -----VLLAGFPCQPFSQAG 83 VL+ G PCQ +S G Sbjct: 126 YNGPLVLIGGPPCQAYSLVG 145 >gi|218199710|gb|EEC82137.1| hypothetical protein OsI_26187 [Oryza sativa Indica Group] Length = 1083 Score = 47.4 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF GIG L N + ++ E NP++++ Q N Sbjct: 927 VVDLFAGIGYFVLPF---LVKANAKLVYACEWNPHALEALQRN 966 >gi|66392182|ref|NP_001018144.1| DNA (cytosine-5-)-methyltransferase 8 [Danio rerio] gi|62433269|dbj|BAD95482.1| DNA methyltransferase [Danio rerio] Length = 852 Score = 47.4 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKT-YQANFPNTLIFGDIAK 58 +++ LF GI L ++ + +SE+ S+ +F GDI Sbjct: 575 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYVASEVCEDSITVGMVRHFERITYVGDIRN 630 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 I + I + D+++ G PC S Sbjct: 631 ITRKHIQEWGPFDLVIGGSPCNDLSI 656 >gi|332214229|ref|XP_003256234.1| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog [Nomascus leucogenys] Length = 448 Score = 47.4 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 20/90 (22%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 238 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQVHFGDN 294 Query: 57 AKIKTQDIPDHDVLLA-------GFP--CQ 77 K+K +I D V+L G+P CQ Sbjct: 295 RKLKLSNIADR-VILGLIPSSEEGWPIACQ 323 >gi|257887107|ref|ZP_05666760.1| site-specific DNA-methyltransferase [Enterococcus faecium 1,141,733] gi|257823161|gb|EEV50093.1| site-specific DNA-methyltransferase [Enterococcus faecium 1,141,733] Length = 360 Score = 47.4 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 22/100 (22%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------F 53 LK+ F G+G + L E++ E E ++ Y+ + I Sbjct: 3 LKLFSFFSGLGLLDLGFEKS----GFEIVEVFEKKEEFLEMYKYSRKKMGIPLPKYGYSL 58 Query: 54 GDIA----------KIKTQDIPDHDVLLAGFPCQPFSQAG 83 D+ KI+++ + G PC FS AG Sbjct: 59 ADVENLLDDKEFELKIESEKKEGLVGFIGGPPCPDFSIAG 98 >gi|254523796|ref|ZP_05135851.1| modification methylase [Stenotrophomonas sp. SKA14] gi|219721387|gb|EED39912.1| modification methylase [Stenotrophomonas sp. SKA14] Length = 644 Score = 47.4 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQ 62 + DLF G GG L+Q ++ + + ++ + AN P DI Sbjct: 13 VVDLFAGGGGASEGLKQA---LGIDPALAYNHDELAIGMHAANHPLTQHHREDIWHAD-- 67 Query: 63 DIPDHDV-------LLAGFPCQPFSQA 82 P DV A C FSQA Sbjct: 68 --PRVDVAGRPIGWFHASPDCTHFSQA 92 >gi|147779004|emb|CAN75753.1| hypothetical protein VITISV_038412 [Vitis vinifera] Length = 1960 Score = 47.4 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 19/89 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55 L + LF GIGG L L Q H S EI+ + + NT G D Sbjct: 1746 LTMLSLFSGIGGAELTLHQLGIHLKG--VVSVEISETKRNILKKWWHNTGQTGELVQIDD 1803 Query: 56 IAKIKTQDIPD-------HDVLLAGFPCQ 77 I K+ + + D ++ CQ Sbjct: 1804 IQKLASSKLESLIEKFGGFDFVI----CQ 1828 >gi|320010241|gb|ADW05091.1| hypothetical protein Sfla_3673 [Streptomyces flavogriseus ATCC 33331] Length = 216 Score = 47.4 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 11/78 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ D CG GG+ + + + +INP N+P + D Sbjct: 14 LRLLDACCGAGGLSMG----YYLAGYDIVG-VDINPMP------NYPFEFVQADAVDYVA 62 Query: 62 QDIPDHDVLLAGFPCQPF 79 D++ +PCQ F Sbjct: 63 DHGSGFDLIHGSWPCQYF 80 >gi|291546248|emb|CBL19356.1| Site-specific DNA methylase [Ruminococcus sp. SR1/5] Length = 182 Score = 47.4 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 4/62 (6%) Query: 9 CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHD 68 GIG + L + E + E + ++ YQ N + ++ I +PD D Sbjct: 10 AGIGALTLGFQNA----GYEILKAYEPDRKVIEIYQENISQNVTACSLSSIDPATVPDSD 65 Query: 69 VL 70 V Sbjct: 66 VW 67 >gi|302521590|ref|ZP_07273932.1| DNA-cytosine methyltransferase [Streptomyces sp. SPB78] gi|302430485|gb|EFL02301.1| DNA-cytosine methyltransferase [Streptomyces sp. SPB78] Length = 322 Score = 47.4 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 8/78 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 L+ D+ G GG+ L LE+ + + + +T + N P ++ D+ Sbjct: 4 LRSLDVCSGAGGLALGLERA----GFDPVLLLDNKGVACETVRVNRPRWNVLTTDLLDFD 59 Query: 61 T---QDIPDHDVLLAGFP 75 Q+ D D+L AG P Sbjct: 60 PVEHQETYDVDLLSAGPP 77 >gi|302186694|ref|ZP_07263367.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. syringae 642] Length = 278 Score = 47.4 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Query: 27 VECFFSSEINPYSVKTY--QAN---FPNTLIFGDIAKIKTQDIPD-HDVLLAGFPCQPFS 80 + E + Y+ + + N P I+ D+ + DV+ GFPCQ S Sbjct: 22 WRTVCAVERDAYAAQVLAQRQNDGALPAFPIWSDVCSFDGKPWRGLVDVVSGGFPCQDIS 81 Query: 81 QAG 83 AG Sbjct: 82 AAG 84 >gi|266623773|ref|ZP_06116708.1| putative C-5 cytosine-specific DNA methylase [Clostridium hathewayi DSM 13479] gi|288864409|gb|EFC96707.1| putative C-5 cytosine-specific DNA methylase [Clostridium hathewayi DSM 13479] Length = 456 Score = 47.1 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIF-GDIAK 58 I D F G GG + +E +I +P +++ ++ N P+TL DI K Sbjct: 5 IIDCFAGGGGASVGIEMALGRP-------VDIAINHDPQAIRMHKVNHPDTLHLTEDIFK 57 Query: 59 IKTQDI---PDHDVLLAGFPCQPFSQA 82 + + ++ A C S+A Sbjct: 58 VDLKKYVAGRHVALMWASPDCTSHSKA 84 >gi|225432124|ref|XP_002264226.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 712 Score = 47.1 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 19/89 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55 L + LF GIGG L L Q H S EI+ + + NT G D Sbjct: 585 LTMLSLFSGIGGAELTLHQLGIHLKG--VVSVEISETKRNILKKWWHNTGQTGELVQIDD 642 Query: 56 IAKIKTQDIPD-------HDVLLAGFPCQ 77 I K+ + + D ++ CQ Sbjct: 643 IQKLASSKLESLIEKFGGFDFVI----CQ 667 >gi|326508760|dbj|BAJ95902.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 788 Score = 47.1 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF GIG L N + ++ E NP++++ Q N Sbjct: 632 VVDLFSGIGYFVLPF---LVKANAKLVYACEWNPHALEALQRN 671 >gi|297837287|ref|XP_002886525.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297332366|gb|EFH62784.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 732 Score = 47.1 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNT 50 + DL+ G G + L + V ++ + N ++ ++ + N P T Sbjct: 173 MLDLYSGCGAMSTGLCMGASLSGVNLITKWAVDNNSFACESLKLNHPET 221 >gi|255560872|ref|XP_002521449.1| conserved hypothetical protein [Ricinus communis] gi|223539348|gb|EEF40939.1| conserved hypothetical protein [Ricinus communis] Length = 686 Score = 47.1 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 15/88 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---DIAK 58 + + LF GIGG + L + ++ S EI+ + + + T G DIA Sbjct: 562 ISLLSLFSGIGGAEVALHRLGIR--LKRVVSVEISEVNRNIMRCWWEQTNQTGTLIDIAD 619 Query: 59 IKT----------QDIPDHDVLLAGFPC 76 + D+++ G PC Sbjct: 620 VHDLNADRLEQLMSSFGGFDLVVGGSPC 647 >gi|297809639|ref|XP_002872703.1| hypothetical protein ARALYDRAFT_490107 [Arabidopsis lyrata subsp. lyrata] gi|297318540|gb|EFH48962.1| hypothetical protein ARALYDRAFT_490107 [Arabidopsis lyrata subsp. lyrata] Length = 996 Score = 47.1 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF GIG L ++ E NP++++ + N Sbjct: 841 VVDLFAGIGYFVLPF---LVRAKARLVYACEWNPHAIEALRRN 880 >gi|223939324|ref|ZP_03631204.1| DNA-cytosine methyltransferase [bacterium Ellin514] gi|223892037|gb|EEF58518.1| DNA-cytosine methyltransferase [bacterium Ellin514] Length = 374 Score = 47.1 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 18/78 (23%) Query: 24 HRNVECFFSSEINPYSVKTYQANFPNTLIF-----------GDIAKIK---TQDIPD--- 66 + + E +P + T + N + DI K+ ++ Sbjct: 2 KAGWKGVIAIEKDPMAFATLKHNLVDMEEHFAWPKWLPTTSHDIKKVIRKYPSELKKLAG 61 Query: 67 -HDVLLAGFPCQPFSQAG 83 ++ G PCQ FS G Sbjct: 62 KITLVAGGPPCQGFSVNG 79 >gi|255556520|ref|XP_002519294.1| conserved hypothetical protein [Ricinus communis] gi|223541609|gb|EEF43158.1| conserved hypothetical protein [Ricinus communis] Length = 678 Score = 47.1 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 21/91 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55 + + LF GIGG + L + H S E + K + + N+ G D Sbjct: 551 ITVLSLFSGIGGAEVALHRLGIHMKG--VVSVETSETKRKILRMWWRNSGQTGELEQIED 608 Query: 56 IAKIKTQDIPDHDVLL---AGF-------PC 76 I K+ T+ I D L+ GF PC Sbjct: 609 IQKLTTKKI---DRLIERFGGFDFVICQSPC 636 >gi|109897054|ref|YP_660309.1| DNA-cytosine methyltransferase [Pseudoalteromonas atlantica T6c] gi|109699335|gb|ABG39255.1| DNA-cytosine methyltransferase [Pseudoalteromonas atlantica T6c] Length = 372 Score = 47.1 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 38/109 (34%), Gaps = 31/109 (28%) Query: 1 ML--KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-----NPY-------SVKTYQAN 46 M+ K+ F G G + L E+ + + +E + Y ++T Q Sbjct: 1 MMPKKLFSFFSGSGFLDLGFEK----NGFDVVYVNEYHQPFLDAYEYSRQQMKIETPQYG 56 Query: 47 FPNTLIFGDI-----------AKIKTQDIPDH-DVLLAGFPCQPFSQAG 83 + NT I DI +K Q H + G PC FS G Sbjct: 57 YDNTSIE-DIANNSSLLNKLARNVKQQKKEGHITGFIGGPPCPDFSVGG 104 >gi|299769738|ref|YP_003731764.1| C-5 cytosine-specific DNA methylase [Acinetobacter sp. DR1] gi|298699826|gb|ADI90391.1| C-5 cytosine-specific DNA methylase [Acinetobacter sp. DR1] Length = 492 Score = 47.1 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG----D 55 I D F G GG LE+ F +I +P ++ ++AN PNT F D Sbjct: 15 IVDNFAGGGGTSTGLEKAFGRP-------VDIAINHDPKALAMHRANHPNTRHFCENVWD 67 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 + +K + ++ C+ FS+A Sbjct: 68 VDPVKVTNNQPVGLVWLSPDCKHFSKA 94 >gi|291539767|emb|CBL12878.1| Site-specific DNA methylase [Roseburia intestinalis XB6B4] Length = 337 Score = 47.1 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 30/115 (26%), Gaps = 40/115 (34%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 K+ DLF G GG+ Q+ E + E V T D Sbjct: 5 YKMIDLFAGCGGLEDGFLQSGK---YEDVAAVEWLKPQVNTLIKRLETKWKVKD----AK 57 Query: 62 QDIPDHDV-----LLAG----------------------------FPCQPFSQAG 83 + + D+ L G PCQ +S AG Sbjct: 58 ERVMHFDIQREKELFEGWQDDEFGQGKGLDYFVNKVGGIDIIIGGPPCQAYSVAG 112 >gi|298492135|ref|YP_003722312.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708] gi|298234053|gb|ADI65189.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708] Length = 86 Score = 47.1 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 15/68 (22%) Query: 7 LFCGIGGIRLDLE-QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI---KTQ 62 LF G GG+ L E Q F E++ S TY+ + G+ ++ + Sbjct: 24 LFAGCGGLSLGFEAQGFETHGF------EMDTDSCATYKK-----SLKGNCTQVFLTPER 72 Query: 63 DIPDHDVL 70 ++P V+ Sbjct: 73 ELPSATVI 80 >gi|303288149|ref|XP_003063363.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226455195|gb|EEH52499.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 2005 Score = 47.1 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 11/66 (16%) Query: 26 NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----------DIP-DHDVLLAGF 74 V+ FS EI P+ + NF ++F DI ++ D+P + D+L+AG Sbjct: 51 GVDHVFSCEIEPFKQAYIERNFAPPILFRDIRELDGDQATTAYGALVDVPGNVDMLVAGT 110 Query: 75 PCQPFS 80 C +S Sbjct: 111 SCVDYS 116 >gi|328948618|ref|YP_004365955.1| C-5 cytosine-specific DNA methylase [Treponema succinifaciens DSM 2489] gi|328448942|gb|AEB14658.1| C-5 cytosine-specific DNA methylase [Treponema succinifaciens DSM 2489] Length = 94 Score = 47.1 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY--SVKTYQANFP-NTLIFGDIAK 58 L I D+FCG GG L + + N + S+ IN + +++T+ N+P ++ Sbjct: 4 LNIVDMFCGGGGESTGLIEAAHDYNFDVNMSA-INHWERAIETHSKNYPFAEHRCENVQH 62 Query: 59 IKTQDI---PDHDVLLAGFPCQ 77 I+ Q + + D++ A CQ Sbjct: 63 IQPQTLKASKNTDLMWASPGCQ 84 >gi|229590290|ref|YP_002872409.1| putative cytosine-specific modification methylase [Pseudomonas fluorescens SBW25] gi|229362156|emb|CAY49058.1| putative cytosine-specific modification methylase [Pseudomonas fluorescens SBW25] Length = 637 Score = 47.1 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 8/83 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 + DLF G GG + + + +V + NP ++ ++AN P T + D+ ++ Sbjct: 26 VVDLFAGGGGASTGIARAYREPDV----AVNHNPIALAVHRANHPKTAHYVADVFEVDPV 81 Query: 63 DIP---DHDVLLAGFPCQPFSQA 82 +L A C+ S+A Sbjct: 82 MATGGQPVGILWASPDCRHHSKA 104 >gi|27497152|gb|AAO17342.1| methylase [Neisseria polysaccharea] Length = 90 Score = 47.1 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 4/33 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE 34 DLF GIGG R+ ++ + E FSSE Sbjct: 62 FTFIDLFAGIGGFRIAMQ----NLGGEYVFSSE 90 >gi|127454|sp|P25283|MTG2_HAEGA RecName: Full=Modification methylase HgaIB; Short=M.HgaIB; AltName: Full=Cytosine-specific methyltransferase HgaIB; AltName: Full=M.HgaI-2 gi|216712|dbj|BAA14378.1| HgaI methylase [Avibacterium paragallinarum] gi|435624|dbj|BAA04207.1| HgaI methylase 2 [Avibacterium paragallinarum] gi|1090539|prf||2019268B HgaI restriction methylase:ISOTYPE=2 Length = 358 Score = 47.1 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%) Query: 2 LKI--TDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDI 56 +KI LF GIG + L + N+ ++E+ TYQ +P T +F GDI Sbjct: 1 MKINAMSLFSSAGIGELDL------HKGNLNFVVANELLKKRADTYQFFYPETKMFQGDI 54 Query: 57 AKIKTQ-DI------PDHDVLLAGFPCQPFSQAG 83 + K + +I + LLA PCQ S G Sbjct: 55 SDEKLKREILLSAQQNNVKFLLATPPCQGLSSVG 88 >gi|299756527|ref|XP_001829400.2| hypothetical protein CC1G_00579 [Coprinopsis cinerea okayama7#130] gi|298411717|gb|EAU92360.2| hypothetical protein CC1G_00579 [Coprinopsis cinerea okayama7#130] Length = 1235 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 32/108 (29%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54 LK D+F G+ G L + +E + EI+P + +T + N P T++ Sbjct: 757 LKTLDVFAGVLGYSKGLSEGSGC--MEITHAIEISPSAAQTAKRNSPKTVVINQCANAVF 814 Query: 55 -------------------DIAKIKTQDIP---DHDVLLAGFPCQPFS 80 D +K K +P DV++ GFPCQ S Sbjct: 815 QYAKKSHEGFQVAPPVQLWD-SKEKIPSLPPPGSFDVIVIGFPCQAHS 861 >gi|170739778|ref|YP_001768433.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46] gi|168194052|gb|ACA15999.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46] Length = 423 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 20/80 (25%) Query: 24 HRNVECFFSSEINPYSVKTYQAN-----------FPN-----TLIFGDIAKIKTQDI--- 64 + F+ E + ++ T + N +P + + ++ Sbjct: 24 KAGWKGLFAIEKDAFAFDTLKHNLIDDGDRYRFVWPEWLEKKPWTIEALMEAHPDELVNL 83 Query: 65 -PDHDVLLAGFPCQPFSQAG 83 D+L G PCQ FS AG Sbjct: 84 RGKIDLLAGGPPCQGFSSAG 103 >gi|27529842|dbj|BAC53936.1| chromomethylase-like protein [Nicotiana tabacum] Length = 741 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 6/64 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + DL+ G G + L + V+ ++ ++N Y+ + + N P T + Sbjct: 177 NLLDLYSGCGAMSTGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETA----VRNES 232 Query: 61 TQDI 64 D Sbjct: 233 ADDF 236 >gi|317401191|gb|EFV81837.1| DNA-cytosine methyltransferase [Achromobacter xylosoxidans C54] Length = 523 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 40/135 (29%), Gaps = 57/135 (42%) Query: 4 ITDLFCGIGGIRLDLEQ---TFNHRNVECFFSSEINPYSVKT--YQANF--------PNT 50 + DLF G GG+ S E +P + +T +A F P+ Sbjct: 9 VIDLFAGPGGLCEGFSSVVDASGAAGFAVNISIEKDPVAHRTLLLRAIFRKFPKGQVPDC 68 Query: 51 ---LIFGDIAKIKTQDIPDHDV-------------------------------------- 69 + G I+ + Q + D D+ Sbjct: 69 YYDYVRGKIS--REQFLCDPDIRVAAKDAAKEARHAELGVTPPEAVDAWIREALGGRTDW 126 Query: 70 -LLAGFPCQPFSQAG 83 L+ G PCQ +S AG Sbjct: 127 VLIGGPPCQAYSLAG 141 >gi|169977312|emb|CAQ18903.1| chromomethylase [Nicotiana sylvestris] gi|169977314|emb|CAQ18904.1| chromomethylase [Nicotiana sylvestris] gi|169977316|emb|CAQ18905.1| chromomethylase [Nicotiana sylvestris] gi|169977318|emb|CAQ18906.1| chromomethylase [Nicotiana sylvestris] Length = 741 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 6/64 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + DL+ G G + L + V+ ++ ++N Y+ + + N P T + Sbjct: 177 NLLDLYSGCGAMSTGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETA----VRNES 232 Query: 61 TQDI 64 D Sbjct: 233 ADDF 236 >gi|312132821|ref|YP_004000160.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. longum BBMN68] gi|311773786|gb|ADQ03274.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp. longum BBMN68] Length = 517 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 10/46 (21%) Query: 47 FPNTLIFGDIAKIKTQDIPD---------HDVLLAGFPCQPFSQAG 83 F LI GDI ++ I D D++ G PCQ FS AG Sbjct: 103 FDGRLIVGDIRRLNA-FIEDRGSALVHGEVDLVSGGPPCQSFSLAG 147 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 +LF G GG+ L L ++E++ +T+ N Sbjct: 8 TFIELFAGCGGLSLGLRSA----GFREVMANELSSMPAETFALN 47 >gi|145350330|ref|XP_001419563.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579795|gb|ABO97856.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 278 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 3/44 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF GIG L Q + ++ E NP S + + N Sbjct: 124 TVVDLFAGIGYYTL---QLLKNAGAAKVYACEWNPNSCEALRHN 164 >gi|302188331|ref|ZP_07265004.1| putative cytosine-specific modification methylase [Pseudomonas syringae pv. syringae 642] Length = 599 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 8/83 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT- 61 + DLF G GG + + + +V + NP ++ ++AN P T + D+ ++ Sbjct: 24 VVDLFAGGGGASTGISRAYREPDV----AVNHNPIALAVHRANHPQTDHYVADVFEVDPV 79 Query: 62 --QDIPDHDVLLAGFPCQPFSQA 82 +L A C+ S+A Sbjct: 80 LATRGQPVGILWASPDCRHHSKA 102 >gi|218847945|ref|YP_002454784.1| type II DNA-methyltransferase, putative [Bacillus cereus G9842] gi|218546076|gb|ACK98469.1| type II DNA-methyltransferase, putative [Bacillus cereus G9842] Length = 463 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + + G GGI + + E+ + + NF + ++ D+ I Sbjct: 126 ISLLSVCAG-GGI--GTASFVDTQYFTPVAEIELEEDCCEAIRHNFSSFIMNCDVRDINV 182 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +P DV+ PC FS G Sbjct: 183 --VPKVDVINCTIPCNNFSTLG 202 >gi|161621506|gb|ABX75257.1| cytosine-5-methyltransferase [Malus x domestica] Length = 107 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 15/88 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55 + + LF GIGG + L + ++ S EI+ + + + T G D Sbjct: 22 INVLSLFTGIGGAEVALHRLG--VPLKNVISVEISEVNRNVVSSWWEQTNQRGRLQHVDD 79 Query: 56 IAKIKTQ-------DIPDHDVLLAGFPC 76 + ++ + D+++ G PC Sbjct: 80 VQQLNGDHLEQYMSEFGGFDLVIGGSPC 107 >gi|325141454|gb|EGC63930.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis 961-5945] gi|325199103|gb|ADY94559.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis G2136] Length = 330 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 9/69 (13%) Query: 22 FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP--------DHD-VLLA 72 ++ + P +TY+AN I D+ +++ + + D D +L+ Sbjct: 1 MQSAGIQVLAGIDYEPSCKETYEANINAKFIQADVFELQPETLEKELGLKKNDDDLILIG 60 Query: 73 GFPCQPFSQ 81 PCQ +S Sbjct: 61 CSPCQYWSV 69 >gi|315585938|gb|ADU40319.1| site-specific DNA-methyltransferase [Helicobacter pylori 35A] Length = 68 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 8/66 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57 I + F G GG L Q + + + ++I+ ++KT N + I Sbjct: 3 YNICEFFVGAGGSHLGFIQ----QGFKTLYVNDIDKDALKTLLHNNKELKDAIIDQTSIT 58 Query: 58 KIKTQD 63 +I ++ Sbjct: 59 EIDPKN 64 >gi|169600411|ref|XP_001793628.1| hypothetical protein SNOG_03039 [Phaeosphaeria nodorum SN15] gi|160705432|gb|EAT89770.2| hypothetical protein SNOG_03039 [Phaeosphaeria nodorum SN15] Length = 1146 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 18/90 (20%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAKIKT 61 LF G G + +E+ +V+ E + ++ T +AN N G + + Sbjct: 532 SLFSGGGNLDRGIEE-GGAVDVQTV--VEWDAAAIHTQRANARNPTTQQFFCGSVDDHLS 588 Query: 62 QDIPDHD-----------VLLAGFPCQPFS 80 I D ++LAG PC FS Sbjct: 589 MAIAGSDDQLVPYIGCVNIILAGSPCPGFS 618 >gi|124262880|ref|YP_001023350.1| C-5 cytosine-specific DNA methylase [Methylibium petroleiphilum PM1] gi|124262126|gb|ABM97115.1| C-5 cytosine-specific DNA methylase [Methylibium petroleiphilum PM1] Length = 473 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 32/91 (35%), Gaps = 20/91 (21%) Query: 9 CGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIFGDIAKIK------ 60 GIG + + VEC F++EI V + + I D + Sbjct: 135 SGIGVLDRAAHEGLEQAGVECRLAFANEIREDCV---EHMCDHNPIV-DQHTVTLTAPMQ 190 Query: 61 --------TQDIPDHDVLLAGFPCQPFSQAG 83 +P DVL+ G PC S+AG Sbjct: 191 ELAFDEWAMSRLPKVDVLVGGIPCSGASRAG 221 >gi|156549014|ref|XP_001607336.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase [Nasonia vitripennis] Length = 1682 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 17/94 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFG--DIA- 57 + ++F G GG+ L L ++ + + ++ E + + T+Q N P+ T++ G DI Sbjct: 1224 MTSLEIFAGCGGLSLGLRESGVIKKLGS-WAIESDVDAANTFQLNNPDITVLVGHPDIVL 1282 Query: 58 ------KIKTQD---IPDHD---VLLAGFPCQPF 79 + + D +P D L A PC+ + Sbjct: 1283 KNAMKGEFEDSDGKLLPRKDDVEFLCATLPCENY 1316 >gi|126540960|emb|CAM46957.1| DNA (cytosine-5-)-methyltransferase 5 [Danio rerio] Length = 1296 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 16/85 (18%) Query: 3 KITDLFCGI--GGI---RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDI 56 ++ LF GI G + L + VE + +SE++ SV N + + D+ Sbjct: 1013 RVLSLFDGIATGYLVLRDLGFK-------VEKYVASEVDEESVTISMVNHEGKITYVDDV 1065 Query: 57 AKIKTQDIPD---HDVLLAGFPCQP 78 KI + I D+L+ G PC Sbjct: 1066 KKITRKHIDKWGPFDLLIGGSPCND 1090 >gi|66472742|ref|NP_001018315.1| DNA methyltransferase dnmt5 [Danio rerio] gi|62433263|dbj|BAD95479.1| DNA methyltransferase [Danio rerio] Length = 1297 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 16/85 (18%) Query: 3 KITDLFCGI--GGI---RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDI 56 ++ LF GI G + L + VE + +SE++ SV N + + D+ Sbjct: 1014 RVLSLFDGIATGYLVLRDLGFK-------VEKYVASEVDEESVTISMVNHEGKITYVDDV 1066 Query: 57 AKIKTQDIPD---HDVLLAGFPCQP 78 KI + I D+L+ G PC Sbjct: 1067 KKITRKHIDKWGPFDLLIGGSPCND 1091 >gi|154482791|ref|ZP_02025239.1| hypothetical protein EUBVEN_00468 [Eubacterium ventriosum ATCC 27560] gi|149736386|gb|EDM52272.1| hypothetical protein EUBVEN_00468 [Eubacterium ventriosum ATCC 27560] Length = 193 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 17/32 (53%) Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 G + ++K +I D++ G PCQ S AG Sbjct: 2 HVGSVTELKGDEIQPVDIITFGSPCQDLSIAG 33 >gi|297788908|ref|XP_002862484.1| hypothetical protein ARALYDRAFT_920657 [Arabidopsis lyrata subsp. lyrata] gi|297308026|gb|EFH38742.1| hypothetical protein ARALYDRAFT_920657 [Arabidopsis lyrata subsp. lyrata] Length = 163 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 23/96 (23%) Query: 5 TDLFCGIGGIRLDLE----QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKI 59 D+F G GG+ LE Q F + + + +A D I+ + Sbjct: 6 LDIFAGCGGLSYGLEKAVAQAFKQNHPDATVFVD---NCNVILRAIMEKCGDVDDCISTV 62 Query: 60 KTQDIP---------------DHDVLLAGFPCQPFS 80 + ++ D + G PCQ FS Sbjct: 63 EAAELAAKLDDNQKSTLPLPGQVDFINGGPPCQGFS 98 >gi|301632038|ref|XP_002945098.1| PREDICTED: hypothetical protein LOC100485715 [Xenopus (Silurana) tropicalis] Length = 368 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%) Query: 51 LIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 I+ DI D+++ GFPCQ S AG Sbjct: 10 PIWSDIRTFDGAAWRGSVDIVVGGFPCQDISFAG 43 >gi|226292283|gb|EEH47703.1| DNA repair protein rad8 [Paracoccidioides brasiliensis Pb18] Length = 2038 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 14/76 (18%) Query: 18 LEQTFNHR-NVECFFSSEINPYSVKTY-QANFPNTLIFGDIAKIKTQD----------IP 65 ++ F N+ FS+EI+P+ ++Y Q NF +IF D+ ++ D +P Sbjct: 142 FKRIFGKTLNIHHLFSAEIDPF-KQSYIQRNFSPDIIFRDVNELIADDATTAFGSLRKVP 200 Query: 66 -DHDVLLAGFPCQPFS 80 D D+L+ GF C FS Sbjct: 201 ADLDLLIVGFSCVDFS 216 >gi|295673276|ref|XP_002797184.1| DNA repair protein rad8 [Paracoccidioides brasiliensis Pb01] gi|226282556|gb|EEH38122.1| DNA repair protein rad8 [Paracoccidioides brasiliensis Pb01] Length = 2095 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 14/76 (18%) Query: 18 LEQTFNHR-NVECFFSSEINPYSVKTY-QANFPNTLIFGDIAKIKTQD----------IP 65 ++ F N+ FS+EI+P+ ++Y Q NF +IF D+ ++ D +P Sbjct: 141 FKRIFGKTLNIHHLFSAEIDPF-KQSYIQRNFSPDIIFRDVNELIADDATTAFGSLRKVP 199 Query: 66 -DHDVLLAGFPCQPFS 80 D D+L+ GF C FS Sbjct: 200 ADLDLLIVGFSCVDFS 215 >gi|225628987|ref|ZP_03787021.1| Modification methylase HgiDI [Brucella ceti str. Cudo] gi|261319385|ref|ZP_05958582.1| modification methylase [Brucella pinnipedialis B2/94] gi|261756709|ref|ZP_06000418.1| DNA-cytosine methyltransferase [Brucella sp. F5/99] gi|265986615|ref|ZP_06099172.1| modification methylase [Brucella pinnipedialis M292/94/1] gi|225616833|gb|EEH13881.1| Modification methylase HgiDI [Brucella ceti str. Cudo] gi|261298608|gb|EEY02105.1| modification methylase [Brucella pinnipedialis B2/94] gi|261736693|gb|EEY24689.1| DNA-cytosine methyltransferase [Brucella sp. F5/99] gi|264658812|gb|EEZ29073.1| modification methylase [Brucella pinnipedialis M292/94/1] Length = 274 Score = 46.7 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 6/48 (12%) Query: 41 KTYQANFPNTLIFGDIAKIKTQDIPDH-----DVLLAGFPCQPFSQAG 83 +TY+ N + D+ I P D++ G PCQ +S AG Sbjct: 2 ETYRHNVGRQVHKHDLKDIFAVA-PVIGGMAPDLITGGPPCQDYSVAG 48 >gi|168034417|ref|XP_001769709.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679058|gb|EDQ65510.1| predicted protein [Physcomitrella patens subsp. patens] Length = 700 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFG 54 + DL+CG G + + N + ++ ++N ++ + + N P T + Sbjct: 152 LLDLYCGCGAMSTGICLGMNLAGINLVTKWAVDLNEFACMSLKYNHPETTVRN 204 Score = 35.1 bits (81), Expect = 3.2, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 317 DCDVICGGPPCQGAS 331 >gi|325127388|gb|EGC50322.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis N1568] gi|325204962|gb|ADZ00416.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis M01-240355] Length = 330 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 9/69 (13%) Query: 22 FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP--------DHD-VLLA 72 ++ + P +TY+AN I D+ +++ + + D D +L+ Sbjct: 1 MQSAGIQVLAGIDYEPSCKETYEANINAKFIQADVFELQPETLEKELGLKKNDDDLILIG 60 Query: 73 GFPCQPFSQ 81 PCQ +S Sbjct: 61 CSPCQYWSV 69 >gi|323487264|ref|ZP_08092566.1| site-specific DNA methylase [Clostridium symbiosum WAL-14163] gi|323399405|gb|EGA91801.1| site-specific DNA methylase [Clostridium symbiosum WAL-14163] Length = 456 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 17/91 (18%) Query: 2 LK--ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIF-G 54 +K I D F G GG + +E +I +P +++ ++ N P+TL Sbjct: 1 MKDLIIDCFAGGGGASVGMEMALGRP-------VDIAINHDPQALRMHKVNHPDTLHLTE 53 Query: 55 DIAKIKTQDI---PDHDVLLAGFPCQPFSQA 82 DI ++ + ++ A C S+A Sbjct: 54 DIFEVDLKQYVAGRHVALMWASPDCTSHSKA 84 >gi|83645622|ref|YP_434057.1| site-specific DNA methylase [Hahella chejuensis KCTC 2396] gi|83633665|gb|ABC29632.1| Site-specific DNA methylase [Hahella chejuensis KCTC 2396] Length = 555 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFGD-IAK 58 + D F G GG +EQ S +I +P +++ ++ N P T + + + Sbjct: 24 VVDNFAGGGGASTGIEQAIGR-------SVDIAINHDPEAIELHKLNHPQTEHYCESVWN 76 Query: 59 IKTQDI---PDHDVLLAGFPCQPFSQA 82 I +++ + C+ FS+A Sbjct: 77 IDPREVCKGRPVGLAWFSPDCKHFSRA 103 >gi|301626439|ref|XP_002942400.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Xenopus (Silurana) tropicalis] Length = 937 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +++ LF GI L L+ H +E + +SE+ S+ +++ GD+ I Sbjct: 659 IRVLSLFDGIATGLLVLKDLGIH--IERYIASEVCEDSITVGMVRHQGKIMYVGDVRNIT 716 Query: 61 TQDIPD---HDVLLAGFPCQPFSQ 81 + I + D+++ G PC S Sbjct: 717 RKHIQEWGPFDLVIGGSPCNDLSI 740 >gi|302694677|ref|XP_003037017.1| hypothetical protein SCHCODRAFT_103476 [Schizophyllum commune H4-8] gi|300110714|gb|EFJ02115.1| hypothetical protein SCHCODRAFT_103476 [Schizophyllum commune H4-8] Length = 1190 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 41/114 (35%), Gaps = 36/114 (31%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53 L++ D+F G+G + L R ++ E +P + KT ANF ++ Sbjct: 697 LRVLDVFGGVGAFSMGL--ADGSRCMKLTHLIEKSPSAAKTVIANFSGVQVYNQCANTVL 754 Query: 54 --------------GD-------IAKIKTQDIP-----DHDVLLAGFPCQPFSQ 81 GD I P D DV++AGFPCQ S Sbjct: 755 EYMVKRHDKVTLPSGDPVPAPMQIYDANIACPPPIKPGDIDVVVAGFPCQSHSL 808 >gi|73948843|ref|XP_849815.1| PREDICTED: similar to DNA methyltransferase 3A isoform 1 [Canis familiaris] Length = 530 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 10/83 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD---IAK 58 +++ LF GI L L+ V+C+ +SE+ S+ + GD I + Sbjct: 257 IRVLSLFDGIATGLLVLKDLG--IQVDCYIASEVCKDSITV-----GKIMYVGDVCSITQ 309 Query: 59 IKTQDIPDHDVLLAGFPCQPFSQ 81 Q+ D+++ G PC S Sbjct: 310 KHIQEWGPLDLVIGGSPCNGLSI 332 >gi|111657454|ref|ZP_01408203.1| hypothetical protein SpneT_02001348 [Streptococcus pneumoniae TIGR4] gi|149012556|ref|ZP_01833553.1| hypothetical protein CGSSp19BS75_10018 [Streptococcus pneumoniae SP19-BS75] gi|169834352|ref|YP_001694057.1| hypothetical protein SPH_0667 [Streptococcus pneumoniae Hungary19A-6] gi|182683502|ref|YP_001835249.1| type II DNA modification methyltransferase, truncation [Streptococcus pneumoniae CGSP14] gi|255964981|ref|YP_003104753.1| type II DNA modification methyltransferase [Streptococcus pneumoniae TIGR4] gi|303255235|ref|ZP_07341308.1| type II DNA modification methyltransferase, truncation [Streptococcus pneumoniae BS455] gi|303260059|ref|ZP_07346032.1| type II DNA modification methyltransferase [Streptococcus pneumoniae SP-BS293] gi|303261243|ref|ZP_07347191.1| type II DNA modification methyltransferase [Streptococcus pneumoniae SP14-BS292] gi|303263908|ref|ZP_07349829.1| type II DNA modification methyltransferase [Streptococcus pneumoniae BS397] gi|303267056|ref|ZP_07352927.1| type II DNA modification methyltransferase [Streptococcus pneumoniae BS457] gi|303269271|ref|ZP_07355045.1| type II DNA modification methyltransferase [Streptococcus pneumoniae BS458] gi|85720560|gb|ABC75785.1| type II DNA modification methyltransferase, truncation [Streptococcus pneumoniae TIGR4] gi|147763361|gb|EDK70298.1| hypothetical protein CGSSp19BS75_10018 [Streptococcus pneumoniae SP19-BS75] gi|168996854|gb|ACA37466.1| conserved domain protein [Streptococcus pneumoniae Hungary19A-6] gi|182628836|gb|ACB89784.1| type II DNA modification methyltransferase, truncation [Streptococcus pneumoniae CGSP14] gi|302597776|gb|EFL64849.1| type II DNA modification methyltransferase, truncation [Streptococcus pneumoniae BS455] gi|302637377|gb|EFL67864.1| type II DNA modification methyltransferase [Streptococcus pneumoniae SP14-BS292] gi|302638754|gb|EFL69216.1| type II DNA modification methyltransferase [Streptococcus pneumoniae SP-BS293] gi|302641168|gb|EFL71541.1| type II DNA modification methyltransferase [Streptococcus pneumoniae BS458] gi|302643384|gb|EFL73660.1| type II DNA modification methyltransferase [Streptococcus pneumoniae BS457] gi|302646313|gb|EFL76539.1| type II DNA modification methyltransferase [Streptococcus pneumoniae BS397] Length = 54 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 DLF G GG L+++ ++ + EI+ +VKTY+ N P Sbjct: 7 IDLFNGAGGTTSGLKKS----GIDVQVAVEIDSVAVKTYKLNNPEV 48 >gi|317499855|ref|ZP_07958093.1| site-specific DNA methylase [Lachnospiraceae bacterium 8_1_57FAA] gi|316898757|gb|EFV20790.1| site-specific DNA methylase [Lachnospiraceae bacterium 8_1_57FAA] Length = 419 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIF-GDIAK 58 I D F G GG + +E S +I +P ++ ++ N PNTL DI + Sbjct: 2 IIDCFAGGGGASVGIEMALGR-------SVDIAINHDPDAILMHKTNHPNTLHLTEDIFR 54 Query: 59 IKTQDI---PDHDVLLAGFPCQPFSQA 82 + + ++ A C S+A Sbjct: 55 VDLKKYVKGRHVALMWASPDCTSHSKA 81 >gi|302558936|ref|ZP_07311278.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302476554|gb|EFL39647.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length = 431 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 8/71 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DL CGIGG L + + + +P + + +AN + L GD+ +++ D Sbjct: 135 VADLCCGIGGDALAFARAGIR-----VLAVDRDPLTCQVARAN-ADALGLGDLIEVREAD 188 Query: 64 IPDHDVLLAGF 74 + + D AG+ Sbjct: 189 VTEVD--TAGY 197 >gi|222630097|gb|EEE62229.1| hypothetical protein OsJ_17016 [Oryza sativa Japonica Group] Length = 551 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 15/85 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ ++ GIGG + L + ++C S + + + K + + NT G + +I T Sbjct: 413 LRVLSIYSGIGGAAIALHRLG--IPLQCVVSVDQSDTNRKILRRWWSNTEQKGQLRQINT 470 Query: 62 -------------QDIPDHDVLLAG 73 ++ D+++ G Sbjct: 471 IWKLKINVLEDLVKEFGGFDIIIGG 495 >gi|218196042|gb|EEC78469.1| hypothetical protein OsI_18342 [Oryza sativa Indica Group] Length = 693 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 15/85 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ ++ GIGG + L + ++C S + + + K + + NT G + +I T Sbjct: 555 LRVLSIYSGIGGAAIALHRLG--IPLQCVVSVDQSDTNRKILRRWWSNTEQKGQLRQINT 612 Query: 62 -------------QDIPDHDVLLAG 73 ++ D+++ G Sbjct: 613 IWKLKINVLEDLVKEFGGFDIIIGG 637 >gi|160875076|ref|YP_001554392.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195] gi|160860598|gb|ABX49132.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195] Length = 516 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG----D 55 I D F G GG + S +I +P ++ + AN P TL + D Sbjct: 5 IVDNFAGGGGASTGIAWAIGR-------SVDIAINHDPDAIAMHSANHPETLHYCESVFD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 I ++ D+ C+ FS+A Sbjct: 58 IDPVQATAGKPVDLAWFSPDCKHFSKA 84 >gi|160875117|ref|YP_001554433.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195] gi|160860639|gb|ABX49173.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195] gi|315267308|gb|ADT94161.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS678] Length = 516 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG----D 55 I D F G GG + S +I +P ++ + AN P TL + D Sbjct: 5 IVDNFAGGGGASTGIAWAIGR-------SVDIAINHDPDAIAMHSANHPETLHYCESVFD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 I ++ D+ C+ FS+A Sbjct: 58 IDPVQATAGKPVDLAWFSPDCKHFSKA 84 >gi|115461927|ref|NP_001054563.1| Os05g0133900 [Oryza sativa Japonica Group] gi|113578114|dbj|BAF16477.1| Os05g0133900 [Oryza sativa Japonica Group] Length = 667 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 15/85 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ ++ GIGG + L + ++C S + + + K + + NT G + +I T Sbjct: 542 LRVLSIYSGIGGAAIALHRLG--IPLQCVVSVDQSDTNRKILRRWWSNTEQKGQLRQINT 599 Query: 62 -------------QDIPDHDVLLAG 73 ++ D+++ G Sbjct: 600 IWKLKINVLEDLVKEFGGFDIIIGG 624 >gi|50878401|gb|AAT85176.1| putative DNA methyltransferase DMT106 [Oryza sativa Japonica Group] gi|215693344|dbj|BAG88726.1| unnamed protein product [Oryza sativa Japonica Group] Length = 680 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 15/85 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ ++ GIGG + L + ++C S + + + K + + NT G + +I T Sbjct: 542 LRVLSIYSGIGGAAIALHRLG--IPLQCVVSVDQSDTNRKILRRWWSNTEQKGQLRQINT 599 Query: 62 -------------QDIPDHDVLLAG 73 ++ D+++ G Sbjct: 600 IWKLKINVLEDLVKEFGGFDIIIGG 624 >gi|160876612|ref|YP_001555928.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195] gi|160862134|gb|ABX50668.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195] gi|315268808|gb|ADT95661.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS678] Length = 516 Score = 46.3 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG----D 55 I D F G GG + S +I +P ++ + AN P TL + D Sbjct: 5 IVDNFAGGGGASTGIAWAIGR-------SVDIAINHDPDAIAMHSANHPETLHYCESVFD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 I ++ D+ C+ FS+A Sbjct: 58 IDPVQATAGKPVDLAWFSPDCKHFSKA 84 >gi|304409175|ref|ZP_07390796.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS183] gi|307303178|ref|ZP_07582933.1| C-5 cytosine-specific DNA methylase [Shewanella baltica BA175] gi|304352996|gb|EFM17393.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS183] gi|306913538|gb|EFN43960.1| C-5 cytosine-specific DNA methylase [Shewanella baltica BA175] Length = 284 Score = 46.3 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG----D 55 I D F G GG + S +I +P ++ + AN P TL + D Sbjct: 5 IVDNFAGGGGASTGIAWAIGR-------SVDIAINHDPDAIAMHSANHPETLHYCESVFD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 I ++ D+ C+ FS+A Sbjct: 58 IDPVQATAGKPVDLAWFSPDCKHFSKA 84 >gi|226088552|dbj|BAH37021.1| chromomethylase OsMET2c [Oryza sativa Japonica Group] Length = 749 Score = 46.3 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 2 LKITDLFCGIGGIRLD--LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 L + DL+CG GG+ L N+ ++ + + + ++++ N P T + + Sbjct: 214 LSLLDLYCGCGGMSTGLCLGARGGGVNLSARWAIDDDEIACESFRNNHPETRVRNETTD 272 Score = 36.7 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 387 DVDVVCGGPPCQGIS 401 >gi|218196311|gb|EEC78738.1| hypothetical protein OsI_18945 [Oryza sativa Indica Group] Length = 1325 Score = 46.3 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 2 LKITDLFCGIGGIRLD--LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 L + DL+CG GG+ L N+ ++ + + + ++++ N P T + + Sbjct: 748 LSLLDLYCGCGGMSTGLCLGARGGGVNLSARWAIDDDEIACESFRNNHPETRVRNETTD 806 Score = 37.4 bits (87), Expect = 0.63, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 12/24 (50%), Gaps = 2/24 (8%) Query: 59 IKTQDIP--DHDVLLAGFPCQPFS 80 ++ P D DV+ G PCQ S Sbjct: 928 LRPSKFPLGDVDVVCGGPPCQGIS 951 >gi|222630668|gb|EEE62800.1| hypothetical protein OsJ_17603 [Oryza sativa Japonica Group] Length = 1190 Score = 46.3 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 2 LKITDLFCGIGGIRLD--LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 L + DL+CG GG+ L N+ ++ + + + ++++ N P T + + Sbjct: 571 LSLLDLYCGCGGMSTGLCLGARGGGVNLSARWAIDDDEIACESFRNNHPETRVRNETTD 629 Score = 37.4 bits (87), Expect = 0.63, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 12/24 (50%), Gaps = 2/24 (8%) Query: 59 IKTQDIP--DHDVLLAGFPCQPFS 80 ++ P D DV+ G PCQ S Sbjct: 793 LRPSKFPLGDVDVVCGGPPCQGIS 816 >gi|134117273|ref|XP_772863.1| hypothetical protein CNBK2340 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255481|gb|EAL18216.1| hypothetical protein CNBK2340 [Cryptococcus neoformans var. neoformans B-3501A] Length = 2291 Score = 46.3 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 20/79 (25%) Query: 13 GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ---------- 62 G+ L E FS EI P+ + NF ++F D+ ++ + Sbjct: 352 GLTLAFEH---------VFSCEIEPFKQAYIERNFAPPVLFRDVTELGKKRAHTAYGSMV 402 Query: 63 DIP-DHDVLLAGFPCQPFS 80 ++P D D+L+AG C +S Sbjct: 403 EVPGDVDILIAGTSCVDYS 421 >gi|291531290|emb|CBK96875.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3] Length = 425 Score = 46.3 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 37/136 (27%), Gaps = 57/136 (41%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTL------ 51 I +LF GIG L+ N + E + ++ Y A P T+ Sbjct: 6 NIVELFSGIGSQAKALKNLGYKVN--TLGTCEWDLHAFIAYDAIHSSPELPETIARMGKA 63 Query: 52 -------------------------------------------IFGDIAKIKTQDIPD-H 67 + D++ + +P+ Sbjct: 64 EILKKLESYTLSNNGKEKMEFKTLRSYSEESIRRIIAAIERNKNYVDVSSLTGDQMPEGV 123 Query: 68 DVLLAGFPCQPFSQAG 83 D+L FPCQ S G Sbjct: 124 DILTYSFPCQDLSNVG 139 >gi|195114574|ref|XP_002001842.1| GI17066 [Drosophila mojavensis] gi|193912417|gb|EDW11284.1| GI17066 [Drosophila mojavensis] Length = 331 Score = 46.3 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 5/73 (6%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQDIPD--HDVL 70 + + + E + ++N + Y N+ ++ +I + ++I ++L Sbjct: 1 MHYAFKYA--QLSGEVVAAMDVNTVANAVYAHNYGATSVKTRNIQSLAEKEIKKLNANML 58 Query: 71 LAGFPCQPFSQAG 83 L PCQP ++ G Sbjct: 59 LMSPPCQPHTRQG 71 >gi|239927639|ref|ZP_04684592.1| DNA methylase [Streptomyces ghanaensis ATCC 14672] gi|291435979|ref|ZP_06575369.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291338874|gb|EFE65830.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 387 Score = 45.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 7/81 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 I DLF G + + E + + KT A + I D+A T Sbjct: 2 IVDLFSG----PRGWSEGLRLLGLSDVGL-EWDTAACKTAHA-AGHATIQCDVAAYPTVP 55 Query: 64 IP-DHDVLLAGFPCQPFSQAG 83 L+A PCQ +S+AG Sbjct: 56 FAGRIKGLIASPPCQAWSRAG 76 >gi|300868938|ref|ZP_07113543.1| putative modification methylase NmeDIP [Oscillatoria sp. PCC 6506] gi|300333061|emb|CBN58735.1| putative modification methylase NmeDIP [Oscillatoria sp. PCC 6506] Length = 399 Score = 45.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 31/106 (29%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-NPYSVKTYQA-----NFP------NTL 51 I F G G + L E + + + +EI +P+ Y+ N P + Sbjct: 7 IFSFFAGSGFLDLGFELS----GFKIAYINEIFSPFMQA-YRYSRKCLNLPLPEYGYSEG 61 Query: 52 IFGDIAKIKTQD------------IPDHDVL--LAGFPCQPFSQAG 83 D+ ++ + ++D++ +AG PC FS G Sbjct: 62 EEADVTRLTAGEAALKLRELMQDARKNNDIIGFIAGPPCPDFSVGG 107 >gi|115443362|ref|XP_001218488.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114188357|gb|EAU30057.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 2106 Score = 45.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 14/78 (17%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT----------QD 63 +R E+ F FS+EI P+ + NF IF D+A++K + Sbjct: 135 LRTHFERNFE---FRHLFSAEIVPFKQAYIERNFHPPFIFRDVAELKDRVAQTAYGSLEK 191 Query: 64 IPD-HDVLLAGFPCQPFS 80 IP D+L+AGF C FS Sbjct: 192 IPKNADILIAGFSCVDFS 209 >gi|310658846|ref|YP_003936567.1| c-5 cytosine-specific DNA methylase [Clostridium sticklandii DSM 519] gi|308825624|emb|CBH21662.1| C-5 cytosine-specific DNA methylase [Clostridium sticklandii] Length = 466 Score = 45.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFGD-IAK 58 I D F G GG +E +I +P ++ ++ N PNT + + + Sbjct: 4 IIDNFAGGGGASTGIEAALGR-------YIDIAINHDPDAILMHKTNHPNTKHYCESVWD 56 Query: 59 IKTQDI---PDHDVLLAGFPCQPFSQA 82 + ++ D+ C+ FS+A Sbjct: 57 VDPLEVTQGNSVDLAWFSPDCKHFSKA 83 >gi|73974594|ref|XP_851753.1| PREDICTED: similar to homolog of yeast tRNA methyltransferase [Canis familiaris] Length = 439 Score = 45.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 10/70 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 229 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRKNLDINGVAHRCQIHFGDN 285 Query: 57 AKIKTQDIPD 66 K+K +I D Sbjct: 286 RKLKLSNIAD 295 >gi|306829494|ref|ZP_07462684.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis ATCC 6249] gi|304428580|gb|EFM31670.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis ATCC 6249] Length = 389 Score = 45.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 14/90 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAK--- 58 K LF +G E + V+ ++E+ + Y +P+ +I GDI Sbjct: 11 KALSLFSNVG----IAETYLSDVGVDVCVANELLEERCRFYSHLYPDVSIIQGDITDSEV 66 Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83 + ++ ++++A PCQ S AG Sbjct: 67 FDKVMLTAKE-AGVEMVIATPPCQGMSNAG 95 >gi|296314673|ref|ZP_06864614.1| modification methylase HpaII [Neisseria polysaccharea ATCC 43768] gi|296838500|gb|EFH22438.1| modification methylase HpaII [Neisseria polysaccharea ATCC 43768] Length = 68 Score = 45.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 4/33 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE 34 DLF GIGG R+ ++ + E FSSE Sbjct: 40 FTFIDLFAGIGGFRIAMQ----NLGGEYVFSSE 68 >gi|168058860|ref|XP_001781424.1| predicted protein [Physcomitrella patens subsp. patens] gi|162667161|gb|EDQ53798.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1008 Score = 45.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 3/44 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF GIG L + ++ E NP ++ + N Sbjct: 851 TVVDLFAGIGYYTLPF---LLKGGAKLVYTCEWNPNAILALRHN 891 >gi|261840146|gb|ACX99911.1| cytosine-specific methyltransferase [Helicobacter pylori 52] Length = 343 Score = 45.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 34/106 (32%), Gaps = 43/106 (40%) Query: 2 LKITD---------------LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + + FC + L EI+ + T + N Sbjct: 1 MTSIELFAGAGGLALGLELAGFC-----HIGL--------------VEIDRSACSTLKKN 41 Query: 47 FPN-TLIFGDIAKIKTQDIP--------DHDVLLAGFPCQPFSQAG 83 P ++ DI + QD+ D D+L G PCQ FS AG Sbjct: 42 RPLWNVLEKDITTLVEQDLEQIFCIKCGDLDLLSGGCPCQSFSYAG 87 >gi|255077988|ref|XP_002502574.1| TWY3 methyltransferase [Micromonas sp. RCC299] gi|226517839|gb|ACO63832.1| TWY3 methyltransferase [Micromonas sp. RCC299] Length = 1107 Score = 45.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 3/44 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF GIG L Q H V F+ E NP SV + N Sbjct: 499 TVVDLFAGIGYYTL---QLLRHAGVAKVFACEWNPNSVAALRRN 539 >gi|193077633|gb|ABO12463.2| DNA cytosine methyltransferase [Acinetobacter baumannii ATCC 17978] Length = 525 Score = 45.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 I D F G GG LE N + P ++ ++AN P+ + D+ + Sbjct: 24 IVDFFAGGGGASTGLEMGLNRPVYVAVNHN---PKAISMHEANHPHAKHYVQDVFAVDPI 80 Query: 63 DIPD-HDV--LLAGFPCQPFSQA 82 DI D H V A C SQA Sbjct: 81 DICDGHQVGWFHASPDCTHHSQA 103 >gi|153815830|ref|ZP_01968498.1| hypothetical protein RUMTOR_02075 [Ruminococcus torques ATCC 27756] gi|145846855|gb|EDK23773.1| hypothetical protein RUMTOR_02075 [Ruminococcus torques ATCC 27756] Length = 91 Score = 45.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIF-GDIAK 58 I D F G GG + +E S +I +P ++ ++ N PNTL DI + Sbjct: 6 IIDCFAGGGGASVGIEMALGR-------SVDIAINHDPDAILMHKTNHPNTLHLTEDIFR 58 Query: 59 IKTQDI---PDHDVLLAGFPCQPFSQA 82 + + ++ A C S+A Sbjct: 59 VDLKKYVKGRHVALMWASPDCTSHSKA 85 >gi|260221752|emb|CBA30630.1| hypothetical protein Csp_C24510 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 515 Score = 45.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY 43 K+ DLF G GG+ + E S+E+ + KT Sbjct: 3 YKVIDLFAGPGGLGEGFASLKEGKAFEIVISAEMEESAHKTL 44 Score = 34.3 bits (79), Expect = 5.9, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 10/15 (66%) Query: 69 VLLAGFPCQPFSQAG 83 V++ G PCQ +S G Sbjct: 121 VVIGGPPCQAYSLVG 135 >gi|169633047|ref|YP_001706783.1| putative C-5 cytosine-specific DNA methylase [Acinetobacter baumannii SDF] gi|169151839|emb|CAP00671.1| putative C-5 cytosine-specific DNA methylase [Acinetobacter baumannii] Length = 517 Score = 45.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 I D F G GG LE N + P ++ ++AN P+ + D+ + Sbjct: 24 IVDFFAGGGGASTGLEMGLNRPVYVAVNHN---PKAISMHEANHPHAKHYIQDVFAVDPI 80 Query: 63 DIPD-HDV--LLAGFPCQPFSQA 82 DI D H V A C SQA Sbjct: 81 DICDGHQVGWFHASPDCTHHSQA 103 >gi|186682875|ref|YP_001866071.1| C-5 cytosine-specific DNA methylase [Nostoc punctiforme PCC 73102] gi|186465327|gb|ACC81128.1| C-5 cytosine-specific DNA methylase [Nostoc punctiforme PCC 73102] Length = 1180 Score = 45.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 4/81 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 KI + G+G + L ++ E + Y N + + + + Sbjct: 5 FKIGSIASGMG-MHL---HGLKQIGGVPVWAIECDEAIAHCYHQNHKSEVYIKKVQDVAP 60 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 D+ D D+L+ C+ S A Sbjct: 61 SDLADIDLLITTLSCKNASIA 81 >gi|303291186|ref|XP_003064879.1| predicted protein [Micromonas pusilla CCMP1545] gi|226453550|gb|EEH50859.1| predicted protein [Micromonas pusilla CCMP1545] Length = 280 Score = 45.5 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 11/84 (13%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 +L++ +L G +E+ +EC + +I+ I DI K Sbjct: 41 ILRVLELCAGSSSFSKAVERICKKLGIECKVYRLDIDSRC---------TVEIVADIEKW 91 Query: 60 KTQDIPD-HDVLLAGFPCQPFSQA 82 Q D++ PC +S A Sbjct: 92 TCQSKKGFFDIIWCSPPCTNYSNA 115 >gi|195387886|ref|XP_002052623.1| GJ17650 [Drosophila virilis] gi|194149080|gb|EDW64778.1| GJ17650 [Drosophila virilis] Length = 332 Score = 45.5 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 5/73 (6%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDIPD--HDVL 70 + + E + ++N + Y N+ +T + +I + +++ ++L Sbjct: 1 MHYAFKYA--QLPGEVVAALDVNTVANAVYAHNYGSTKVKTRNIQSLSEKEVTKLGANML 58 Query: 71 LAGFPCQPFSQAG 83 L PCQP ++ G Sbjct: 59 LMSPPCQPHTRQG 71 >gi|326319209|ref|YP_004236881.1| DNA-cytosine methyltransferase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323376045|gb|ADX48314.1| DNA-cytosine methyltransferase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 526 Score = 45.5 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 39/133 (29%), Gaps = 53/133 (39%) Query: 4 ITDLFCGIGGIRLDLEQ---TFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLIFG- 54 + DLF G GG+ R S E +P + +T FP+ + G Sbjct: 15 VIDLFAGPGGLCEGFSSVVDATGSRRFAVKISIEKDPVAHRTLLLRAIFRQFPDGKVPGC 74 Query: 55 --D-IA-KIKTQDI---------------------------PDHD-------------VL 70 D + KI + + D VL Sbjct: 75 YYDYVRGKINREQFLAHPEIKAVAEHAAREARCAELGVTPASEVDGWIREALGDQTDWVL 134 Query: 71 LAGFPCQPFSQAG 83 + G PCQ +S AG Sbjct: 135 IGGPPCQAYSLAG 147 >gi|262279847|ref|ZP_06057632.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus RUH2202] gi|262260198|gb|EEY78931.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus RUH2202] Length = 555 Score = 45.5 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 4/64 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 I D F G GG LE N + P ++ ++AN P+ + D+ + Sbjct: 24 IVDFFAGGGGASTGLEMGLNRPVHVAVNHN---PKAIAMHEANHPHAKHYVQDVFAVDPV 80 Query: 63 DIPD 66 +I D Sbjct: 81 EICD 84 >gi|332535196|ref|ZP_08411002.1| modification methylase [Pseudoalteromonas haloplanktis ANT/505] gi|332035361|gb|EGI71862.1| modification methylase [Pseudoalteromonas haloplanktis ANT/505] Length = 512 Score = 45.5 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 42/134 (31%), Gaps = 54/134 (40%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKTY--QANFPN--------- 49 + DLF G GG+ + + S E + ++ KT +A F + Sbjct: 8 VIDLFAGPGGLGEGISAAKTEVGKSPFQIGISVEKDFHAHKTLTTRAFFRSLKKKSQPLD 67 Query: 50 ---TLIFGDIAKIKTQDI-PDH-------------------------------D-----V 69 + G I + + ++ PD D V Sbjct: 68 NYYNYLHGKITRDELFELHPDIATEANQETLNGAKELGKDNKLIHKRIKELVKDHKGPKV 127 Query: 70 LLAGFPCQPFSQAG 83 L+ G PCQ +S AG Sbjct: 128 LIGGPPCQAYSLAG 141 >gi|268595503|ref|ZP_06129670.1| LOW QUALITY PROTEIN: DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae 35/02] gi|268597557|ref|ZP_06131724.1| LOW QUALITY PROTEIN: DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae FA19] gi|268602062|ref|ZP_06136229.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae PID18] gi|268604402|ref|ZP_06138569.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae PID1] gi|268682863|ref|ZP_06149725.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae PID332] gi|268685010|ref|ZP_06151872.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae SK-92-679] gi|268687288|ref|ZP_06154150.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae SK-93-1035] gi|291043038|ref|ZP_06568771.1| LOW QUALITY PROTEIN: DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae DGI2] gi|268548892|gb|EEZ44310.1| LOW QUALITY PROTEIN: DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae 35/02] gi|268551345|gb|EEZ46364.1| LOW QUALITY PROTEIN: DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae FA19] gi|268586193|gb|EEZ50869.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae PID18] gi|268588533|gb|EEZ53209.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae PID1] gi|268623147|gb|EEZ55547.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae PID332] gi|268625294|gb|EEZ57694.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae SK-92-679] gi|268627572|gb|EEZ59972.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae SK-93-1035] gi|291013041|gb|EFE05014.1| LOW QUALITY PROTEIN: DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae DGI2] Length = 205 Score = 45.5 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 9/67 (13%) Query: 24 HRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP--------DHD-VLLAGF 74 ++ + +TY+AN I DI +++ + + D D +L+ Sbjct: 1 SAGIQVLAGIDYELSCKETYEANINAKFIQADIFELQPETLEKELGLKKNDDDLILIGCS 60 Query: 75 PCQPFSQ 81 PCQ +S Sbjct: 61 PCQYWSV 67 >gi|296109369|ref|YP_003616318.1| protein of unknown function Met10 [Methanocaldococcus infernus ME] gi|295434183|gb|ADG13354.1| protein of unknown function Met10 [Methanocaldococcus infernus ME] Length = 331 Score = 45.5 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 27/65 (41%), Gaps = 12/65 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIFGDIA 57 + D+F G+G + + +S +INPY+++ + N + I D+ Sbjct: 196 VIDMFAGVGPFSIACKMAKK------IYSIDINPYAIELLKKNIELNKVYKIEPILDDVR 249 Query: 58 KIKTQ 62 + + Sbjct: 250 NVNLE 254 >gi|38233728|ref|NP_939495.1| putative DNA methylase [Corynebacterium diphtheriae NCTC 13129] gi|38199989|emb|CAE49658.1| Putative DNA methylase [Corynebacterium diphtheriae] Length = 192 Score = 45.5 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 19/84 (22%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLIFGDIA 57 ++ DLF G G L LE R E E NP +V + N P+ D+ Sbjct: 46 RVLDLFAGSG--ALGLEAA--SRGAESVVLVENNPKAVAVIRHNIAVVGHPHV----DVV 97 Query: 58 KIKTQDI------PDHDVLLAGFP 75 ++K D++LA P Sbjct: 98 EMKASTYVASAPKNHFDMVLADPP 121 >gi|332884377|gb|EGK04642.1| hypothetical protein HMPREF9456_03404 [Dysgonomonas mossii DSM 22836] Length = 212 Score = 45.5 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 7/81 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60 +KI + + GIGG R N + E +P YQ +PN T+I GD + Sbjct: 1 MKILNCYAGIGGNRK------LWGNEREITAVEFDPKIAAIYQDLYPNDTVIVGDAHQYL 54 Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81 + + D + PC S Sbjct: 55 LEHYQEFDFIWCSPPCPTHSI 75 >gi|196048102|ref|ZP_03115280.1| type II DNA-methyltransferase, putative [Bacillus cereus 03BB108] gi|196021358|gb|EDX60087.1| type II DNA-methyltransferase, putative [Bacillus cereus 03BB108] Length = 464 Score = 45.5 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 7/84 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59 + + + G GGI + + E+ V+ + NF + + GDI I Sbjct: 126 ISLLSVCAG-GGI--GTAAFVDTQYFTPTAEIELEDDCVEVLRHNFGDKSFVFNGDIRDI 182 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +IP DV+ PC ++Q G Sbjct: 183 N--EIPKSDVMNITLPCNKWTQIG 204 >gi|33416520|gb|AAH55850.1| TRNA methyltranferase 12 homolog (S. cerevisiae) [Mus musculus] Length = 446 Score = 45.5 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 10/70 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 228 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDN 284 Query: 57 AKIKTQDIPD 66 K+K DI D Sbjct: 285 RKLKLSDIAD 294 >gi|118150645|ref|NP_080918.2| tRNA wybutosine-synthesizing protein 2 homolog [Mus musculus] gi|81895986|sp|Q8BG71|TYW2_MOUSE RecName: Full=tRNA wybutosine-synthesizing protein 2 homolog; Short=tRNA-yW-synthesizing protein 2; AltName: Full=Alpha-amino-alpha-carboxypropyl transferase TYW2 gi|26327311|dbj|BAC27399.1| unnamed protein product [Mus musculus] gi|26345714|dbj|BAC36508.1| unnamed protein product [Mus musculus] gi|26347897|dbj|BAC37597.1| unnamed protein product [Mus musculus] gi|148697363|gb|EDL29310.1| mCG51593 [Mus musculus] Length = 446 Score = 45.5 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 10/70 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 228 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDN 284 Query: 57 AKIKTQDIPD 66 K+K DI D Sbjct: 285 RKLKLSDIAD 294 >gi|12859716|dbj|BAB31750.1| unnamed protein product [Mus musculus] Length = 423 Score = 45.5 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 10/70 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 228 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDN 284 Query: 57 AKIKTQDIPD 66 K+K DI D Sbjct: 285 RKLKLSDIAD 294 >gi|74012168|ref|XP_850348.1| PREDICTED: similar to DNA methyltransferase 3A isoform 1 [Canis familiaris] Length = 531 Score = 45.5 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 10/83 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ LF GI L L+ V+C+ +SE+ S+ + GD+ + Sbjct: 258 IRVLSLFDGIATGLLVLKDLG--IQVDCYIASEVCKDSITV-----GKIMYVGDVCSVTQ 310 Query: 62 QDIPD---HDVLLAGFPCQPFSQ 81 + I + D+++ G PC S Sbjct: 311 KHIQEWGPLDLVIGGSPCNGLSI 333 >gi|319777371|ref|YP_004137022.1| hypothetical protein MfeM64YM_0647 [Mycoplasma fermentans M64] gi|238809546|dbj|BAH69336.1| hypothetical protein [Mycoplasma fermentans PG18] gi|318038446|gb|ADV34645.1| Hypothetical Protein MfeM64YM_0647 [Mycoplasma fermentans M64] Length = 72 Score = 45.5 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 12/53 (22%) Query: 22 FNHRNVECFFSSEINPYSVKTYQANF------------PNTLIFGDIAKIKTQ 62 N+ + F+SE + + K Y NF P GDI I + Sbjct: 1 MNNLGGQRVFASEWDKNARKAYATNFKNSKNLFNENNEPTNFFAGDITLINPK 53 >gi|330927820|ref|XP_003302014.1| hypothetical protein PTT_13685 [Pyrenophora teres f. teres 0-1] gi|311322847|gb|EFQ89880.1| hypothetical protein PTT_13685 [Pyrenophora teres f. teres 0-1] Length = 1252 Score = 45.5 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 20/95 (21%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF-FSSEINPYSVKTYQANFPN----TLIFGDI 56 L+ +F G G + LE+ + FSSE + T +AN + + G + Sbjct: 654 LRGLSIFSGGGSLDRGLEEGGAVKIHTAVDFSSE----ACHTQRANAKDPGGLHIYCGSV 709 Query: 57 AK-----IKTQD------IPDHDVLLAGFPCQPFS 80 + +D + + D+++AG PC FS Sbjct: 710 DDYLDAVLTRKDQKLIARVGEVDLIVAGSPCPGFS 744 >gi|74012244|ref|XP_850916.1| PREDICTED: similar to DNA methyltransferase 3A isoform 1 [Canis familiaris] Length = 531 Score = 45.5 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 10/83 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ LF GI L L+ V+C+ +SE+ S+ + GD+ + Sbjct: 258 IRVLSLFDGIATGLLVLKDLG--IQVDCYIASEVCKDSITV-----GKIMYVGDVCSVTQ 310 Query: 62 QDIPD---HDVLLAGFPCQPFSQ 81 + I + D+++ G PC S Sbjct: 311 KHIQEWGPLDLVIGGSPCNGLSI 333 >gi|73948636|ref|XP_849220.1| PREDICTED: similar to DNA methyltransferase 3A isoform 1 [Canis familiaris] Length = 531 Score = 45.5 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 10/83 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ LF GI L L+ V+C+ +SE+ S+ + GD+ + Sbjct: 258 IRVLSLFDGIATGLLVLKDLG--IQVDCYIASEVCKDSITV-----GKIMYVGDVCSVTQ 310 Query: 62 QDIPD---HDVLLAGFPCQPFSQ 81 + I + D+++ G PC S Sbjct: 311 KHIQEWGPLDLVIGGSPCNGLSI 333 >gi|224060119|ref|XP_002300046.1| DNA methyltransferase [Populus trichocarpa] gi|222847304|gb|EEE84851.1| DNA methyltransferase [Populus trichocarpa] Length = 344 Score = 45.5 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 23/92 (25%) Query: 2 LKITDLFCGIGGIRLDLEQTF----NHRNVEC------FFSSEINPYSVKTYQANFPNTL 51 + + LF GIGG + L + N +VE S +T N + Sbjct: 219 INVLSLFSGIGGAEVALHRLGIRLKNVVSVEISNVNRSIMSCWWEQT-NQT-----GNLI 272 Query: 52 IFGDIAKIKTQDIP-------DHDVLLAGFPC 76 D+ + + D+++ G PC Sbjct: 273 HIEDVQHLTADRLEQLMNMYGSFDLVVGGSPC 304 >gi|74012646|ref|XP_853590.1| PREDICTED: similar to DNA methyltransferase 3A isoform 1 [Canis familiaris] Length = 531 Score = 45.5 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 10/83 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ LF GI L L+ V+C+ +SE+ S+ + GD+ + Sbjct: 258 IRVLSLFDGIATGLLVLKDLG--IQVDCYIASEVCKDSITV-----GKIMYVGDVCSVTQ 310 Query: 62 QDIPD---HDVLLAGFPCQPFSQ 81 + I + D+++ G PC S Sbjct: 311 KHIQEWGPLDLVIGGSPCNGLSI 333 >gi|73948652|ref|XP_849522.1| PREDICTED: similar to DNA methyltransferase 3A isoform 1 [Canis familiaris] Length = 327 Score = 45.5 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 10/83 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ LF GI L L+ V+C+ +SE+ S+ + GD+ + Sbjct: 144 IRVLSLFDGIATGLLVLKDLG--IQVDCYIASEVCKDSITV-----GKIMYVGDVCSVTQ 196 Query: 62 QDIPD---HDVLLAGFPCQPFSQ 81 + I + D+++ G PC S Sbjct: 197 KHIQEWGPLDLVIGGSPCNGLSI 219 >gi|195443002|ref|XP_002069228.1| GK21086 [Drosophila willistoni] gi|194165313|gb|EDW80214.1| GK21086 [Drosophila willistoni] Length = 221 Score = 45.5 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 6/72 (8%) Query: 18 LEQTFNHR--NVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKIKTQDIPD--HDVLL 71 + FN+ E + ++N + K Y N+ P L +I + +++ ++LL Sbjct: 1 MHYAFNYTKLQGEVVAAMDVNTVANKVYAHNYKNPKYLKTRNIQSLSEKEVNKLNANMLL 60 Query: 72 AGFPCQPFSQAG 83 PCQP ++ G Sbjct: 61 MSPPCQPHTRQG 72 >gi|260890544|ref|ZP_05901807.1| hypothetical protein GCWU000323_01722 [Leptotrichia hofstadii F0254] gi|260859786|gb|EEX74286.1| site-specific DNA-methyltransferase [Leptotrichia hofstadii F0254] Length = 425 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 14/73 (19%) Query: 25 RNVECFFSSEINPYSVKTYQANFPN----TLIFGD--IAKIKTQDIP--------DHDVL 70 N + ++ ++T N PN I D I I +++ + DV Sbjct: 3 ENFRTVYVNDFIKECLETLVYNNPNLLEEKAIIDDTSIENINPKELRKKLNVKKGEIDVF 62 Query: 71 LAGFPCQPFSQAG 83 G C+ FS AG Sbjct: 63 FGGVVCKSFSLAG 75 >gi|226525311|gb|ACO70910.1| conserved hypothetical protein [uncultured Verrucomicrobia bacterium] Length = 187 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 14/87 (16%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ DLF G G L LE R E + +V T NF T + G + Sbjct: 43 RVLDLFAGSG--ALGLEAL--SRGAASVTFVEKDRAAVATIHRNFEKTRLSGTVQAADVF 98 Query: 63 DIPD-------HDVLLAGFPCQPFSQA 82 D D++LA P +S+A Sbjct: 99 SFLDRFAAPESFDLILADPP---YSKA 122 >gi|297160040|gb|ADI09752.1| hypothetical protein SBI_06632 [Streptomyces bingchenggensis BCW-1] Length = 205 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 14/78 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ DL CG GG+ + + + + P Q N+P T D Sbjct: 10 LRVLDLCCGAGGLSMG----YYLAGFDVVG-VDNRP------QPNYPFTFHQADALTFPL 58 Query: 62 QDIPDHDVLLAGFPCQPF 79 D++ A +PCQ F Sbjct: 59 D---GFDLVHASWPCQHF 73 >gi|242010423|ref|XP_002425967.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212509958|gb|EEB13229.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 232 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF GIG L H + ++ E NP +V+ + N Sbjct: 136 VIDLFAGIGYFTLPY---IVHAKAKFVYACEWNPVAVEALRRN 175 >gi|260432507|ref|ZP_05786478.1| C-5 cytosine-specific DNA methylase [Silicibacter lacuscaerulensis ITI-1157] gi|260416335|gb|EEX09594.1| C-5 cytosine-specific DNA methylase [Silicibacter lacuscaerulensis ITI-1157] Length = 689 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 I D F G GG +E S ++ ++AN P TL +I + Sbjct: 7 IIDSFAGGGGASTGIEIALGRSPDVAINHS---AAALALHKANHPYTLHLDSNIWDVDPL 63 Query: 63 DI---PDHDVLLAGFPCQPFSQA 82 +I +L A C+ FS+A Sbjct: 64 EIANGRKVGLLWASPDCKHFSRA 86 >gi|71065540|ref|YP_264267.1| C-5 cytosine-specific DNA methylase [Psychrobacter arcticus 273-4] gi|71038525|gb|AAZ18833.1| probable C-5 cytosine-specific DNA methylase [Psychrobacter arcticus 273-4] Length = 488 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFGD-IAK 58 I D F G GG LE F +I +P ++ ++ N P T + + + Sbjct: 10 IIDNFAGGGGTSTGLEAAFGRP-------VDIAINHDPEAIAMHRINHPGTKHYCESVWD 62 Query: 59 IKTQDI---PDHDVLLAGFPCQPFSQA 82 I+ + + ++ C+ FS+A Sbjct: 63 IEPKSVTGNQPVGLVWLSPDCKHFSKA 89 >gi|256839926|ref|ZP_05545435.1| LOW QUALITY PROTEIN: site-specific DNA-methyltransferase [Parabacteroides sp. D13] gi|256738856|gb|EEU52181.1| LOW QUALITY PROTEIN: site-specific DNA-methyltransferase [Parabacteroides sp. D13] Length = 296 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 13/17 (76%), Positives = 13/17 (76%) Query: 67 HDVLLAGFPCQPFSQAG 83 DVL GFPCQPFS AG Sbjct: 4 VDVLTGGFPCQPFSVAG 20 >gi|154247625|ref|YP_001418583.1| C-5 cytosine-specific DNA methylase [Xanthobacter autotrophicus Py2] gi|154161710|gb|ABS68926.1| C-5 cytosine-specific DNA methylase [Xanthobacter autotrophicus Py2] Length = 579 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 8/80 (10%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQDI- 64 LF G+GG LE+ + +P +V ++ P+T D+ + +++ Sbjct: 15 LFAGMGGGCDGLEEA----GFHVHVAINHDPVAVAVHERRHPHTKHLRCDVFEADPREVC 70 Query: 65 --PDHDVLLAGFPCQPFSQA 82 L A C FS A Sbjct: 71 RGRGVRALHASPDCTHFSVA 90 >gi|149540272|ref|XP_001517753.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus] Length = 421 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 10/70 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H V + E NP++V + N + GD Sbjct: 233 LVDLYAGIGYFTLPF---LVHAGVAFVHACEWNPHAVAALRRNLELNGVADRCQIHAGDN 289 Query: 57 AKIKTQDIPD 66 K+ +D D Sbjct: 290 RKLDLEDRAD 299 >gi|95108172|emb|CAD14571.2| putative bacteriophage cytosine-specific methyltransferase protein [Ralstonia solanacearum GMI1000] Length = 193 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIPDH----------------- 67 + +EI+PY+ + P + DI ++ +D+ + Sbjct: 4 YYNEIDPYAAAWLRNLIAAGHIAPGDVDERDIQDVRPEDLRGYKQHHFFAGVGVWSLALR 63 Query: 68 -----D---VLLAGFPCQPFSQAG 83 D V PCQPFSQAG Sbjct: 64 RAGWPDDRLVWTGSCPCQPFSQAG 87 >gi|240047714|ref|YP_002961102.1| Cytosine-specific methyltransferase [Mycoplasma conjunctivae HRC/581] gi|239985286|emb|CAT05299.1| Cytosine-specific methyltransferase [Mycoplasma conjunctivae] Length = 419 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 37/141 (26%), Gaps = 60/141 (42%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANF------------ 47 +++ + F GIG + + + + + E + ++ Y A Sbjct: 4 IRVLETFSGIGAQHKAISNLNKNNSVKFKVVGTVEWDARAIIAYSAIHHNLFKNYKKIIA 63 Query: 48 PNTLIFGD---------------------IAK------------IKTQDIPDH------- 67 + L D I K I ++ D Sbjct: 64 KHNLTNHDQVNSFLEQFVISLDSKKPSQIIRKDLFFKQVLASAIISANNLGDIINLDVNK 123 Query: 68 ------DVLLAGFPCQPFSQA 82 D++ FPCQ S A Sbjct: 124 VANLKPDLITYSFPCQGLSVA 144 >gi|331270912|ref|YP_004385623.1| putative cytosine-specific DNA methylotransferase [Clostridium botulinum BKT015925] gi|329127304|gb|AEB77248.1| putative cytosine-specific DNA methylotransferase [Clostridium botulinum BKT015925] Length = 349 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 18/32 (56%) Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 +GDI+ I ++PD D+ FPC S +G Sbjct: 41 NYGDISIIDPNELPDFDLFNFSFPCTDISVSG 72 >gi|194215085|ref|XP_001916357.1| PREDICTED: similar to TRNA methyltransferase 12 homolog (S. cerevisiae) [Equus caballus] Length = 439 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 10/70 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 229 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVAHQCQIHFGDN 285 Query: 57 AKIKTQDIPD 66 K+K +I D Sbjct: 286 RKLKLSNIAD 295 >gi|301787627|ref|XP_002929227.1| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog [Ailuropoda melanoleuca] Length = 439 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 10/70 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 229 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRKNLDINGVADRCQIHFGDN 285 Query: 57 AKIKTQDIPD 66 K+K +I D Sbjct: 286 RKLKLSNIAD 295 >gi|281348316|gb|EFB23900.1| hypothetical protein PANDA_019352 [Ailuropoda melanoleuca] Length = 441 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 10/70 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 231 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRKNLDINGVADRCQIHFGDN 287 Query: 57 AKIKTQDIPD 66 K+K +I D Sbjct: 288 RKLKLSNIAD 297 >gi|225681023|gb|EEH19307.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 2092 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 14/76 (18%) Query: 18 LEQTFNHR-NVECFFSSEINPYSVKTY-QANFPNTLIFGDIAKIKTQD----------IP 65 ++ F + FS+EI+P+ ++Y Q NF +IF D+ ++ D +P Sbjct: 142 FKRIFGKTLKIHHLFSAEIDPF-KQSYIQRNFSPDIIFRDVNELIADDATTAFGSLRKVP 200 Query: 66 -DHDVLLAGFPCQPFS 80 D D+L+ GF C FS Sbjct: 201 ADLDLLIVGFSCVDFS 216 >gi|17545588|ref|NP_518990.1| cytosine-specific methyltransferase [Ralstonia solanacearum GMI1000] Length = 194 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIPDH----------------- 67 + +EI+PY+ + P + DI ++ +D+ + Sbjct: 4 YYNEIDPYAAAWLRNLIAAGHIAPGDVDERDIQDVRPEDLRGYKQHHFFAGVGVWSLALR 63 Query: 68 -----D---VLLAGFPCQPFSQAG 83 D V PCQPFSQAG Sbjct: 64 RAGWPDDRLVWTGSCPCQPFSQAG 87 >gi|255074065|ref|XP_002500707.1| hypothetical protein MICPUN_57348 [Micromonas sp. RCC299] gi|226515970|gb|ACO61965.1| hypothetical protein MICPUN_57348 [Micromonas sp. RCC299] Length = 945 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 4/54 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 LK+ LF G G + L Q + E +E + + + A F D Sbjct: 11 LKVASLFSGCGVLDYGLTQAGH----EIILQTESDDAAREVLAARFQGICQPRD 60 >gi|241889614|ref|ZP_04776912.1| modification methylase HphIA [Gemella haemolysans ATCC 10379] gi|241863236|gb|EER67620.1| modification methylase HphIA [Gemella haemolysans ATCC 10379] Length = 96 Score = 45.1 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%) Query: 52 IFGDIAKIKTQDI----PDHDVLLAGFPCQPFSQAG 83 I DI+K+ D+ + DV++ G PCQ FSQ G Sbjct: 2 INEDISKLDIDDVFNEYKNIDVIVGGPPCQGFSQKG 37 >gi|291439417|ref|ZP_06578807.1| DNA modification methylase M.NGOI [Streptomyces ghanaensis ATCC 14672] gi|291342312|gb|EFE69268.1| DNA modification methylase M.NGOI [Streptomyces ghanaensis ATCC 14672] Length = 338 Score = 44.7 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 8/74 (10%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDI 64 D+ G GG+ LE + P + +T AN P ++ D+ ++ Sbjct: 2 DVCAGAGGLASGLESA----GFSPALLLDNKPQACETLLANRPQWNVVCEDLIDFLPEEH 57 Query: 65 P---DHDVLLAGFP 75 P D D+L AG P Sbjct: 58 PEVLDVDLLSAGLP 71 >gi|15600968|ref|NP_232598.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae O1 biovar eltor str. N16961] gi|121586752|ref|ZP_01676535.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae 2740-80] gi|121727743|ref|ZP_01680831.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae V52] gi|147671623|ref|YP_001215865.1| putative site-specific DNA-methyltransferase [Vibrio cholerae O395] gi|153816788|ref|ZP_01969455.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae NCTC 8457] gi|153823195|ref|ZP_01975862.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae B33] gi|227811822|ref|YP_002811832.1| putative site-specific DNA-methyltransferase [Vibrio cholerae M66-2] gi|254850603|ref|ZP_05239953.1| cytosine-specific DNA methyltransferase [Vibrio cholerae MO10] gi|255745992|ref|ZP_05419939.1| site-specific DNA-methyltransferase putative [Vibrio cholera CIRS 101] gi|262162170|ref|ZP_06031185.1| site-specific DNA-methyltransferase putative [Vibrio cholerae INDRE 91/1] gi|262167363|ref|ZP_06035072.1| site-specific DNA-methyltransferase putative [Vibrio cholerae RC27] gi|298500051|ref|ZP_07009857.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9657591|gb|AAF96111.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|114326101|gb|ABI64146.1| cytosine-specific DNA methyltransferase [Vibrio cholerae O395] gi|121549049|gb|EAX59086.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae 2740-80] gi|121629960|gb|EAX62370.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae V52] gi|126512591|gb|EAZ75185.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae NCTC 8457] gi|126519283|gb|EAZ76506.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae B33] gi|146314006|gb|ABQ18546.1| putative site-specific DNA-methyltransferase [Vibrio cholerae O395] gi|227010964|gb|ACP07175.1| putative site-specific DNA-methyltransferase [Vibrio cholerae M66-2] gi|227014870|gb|ACP11079.1| putative site-specific DNA-methyltransferase [Vibrio cholerae O395] gi|254846308|gb|EET24722.1| cytosine-specific DNA methyltransferase [Vibrio cholerae MO10] gi|255735746|gb|EET91144.1| site-specific DNA-methyltransferase putative [Vibrio cholera CIRS 101] gi|262024247|gb|EEY42939.1| site-specific DNA-methyltransferase putative [Vibrio cholerae RC27] gi|262028245|gb|EEY46903.1| site-specific DNA-methyltransferase putative [Vibrio cholerae INDRE 91/1] gi|297542032|gb|EFH78083.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 383 Score = 44.7 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 33/101 (32%), Gaps = 25/101 (24%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--------LIFGD 55 I F G G + L E + F +E + + Y+ + + G Sbjct: 19 IFSFFAGSGFLDLGFE----TSGFDVRFVNEFHKPFLDAYKYSREHMGLPKPKYGHYLGS 74 Query: 56 IAKIKTQDIPD--HDVL-----------LAGFPCQPFSQAG 83 I T + +D++ + G PC FS AG Sbjct: 75 IDDFVTGEKKQLLYDLVQEAKSEALTGFIGGPPCPDFSVAG 115 >gi|87121096|ref|ZP_01076987.1| modification methylase (Cytosine-specific methyltransferase) [Marinomonas sp. MED121] gi|86163588|gb|EAQ64862.1| modification methylase (Cytosine-specific methyltransferase) [Marinomonas sp. MED121] Length = 513 Score = 44.7 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 36/135 (26%), Gaps = 56/135 (41%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKTY--QANF----------- 47 + DLF G GG+ + + S E P + +T +A F Sbjct: 8 VIDLFAGPGGLGEGISSYVGDNGLKPFQIGVSVEKEPSAHRTLTTRAFFRKIADNPDSCN 67 Query: 48 ---------------------------------------PNTLIFGDIAKIKTQDIPDHD 68 N LI I + + Sbjct: 68 DYYDYVKGHITRDQLFELHPKESQAAIEETLNGPKALGVDNELIHERIRTLTSSH-KGPT 126 Query: 69 VLLAGFPCQPFSQAG 83 V++ G PCQ +S AG Sbjct: 127 VVIGGPPCQAYSLAG 141 >gi|194389448|dbj|BAG61690.1| unnamed protein product [Homo sapiens] Length = 694 Score = 44.7 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 6/80 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIAK 58 ++ LF GI L L++ +SE+ S+ ++ N +I K Sbjct: 480 RVLSLFDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNITK 537 Query: 59 IKTQDIPDHDVLLAGFPCQP 78 ++ D+++ G PC Sbjct: 538 KNIEEWGPFDLVIGGSPCND 557 >gi|187939689|gb|ACD38832.1| DNA methyltransferase family protein [Pseudomonas aeruginosa] gi|187939767|gb|ACD38908.1| DNA cytosine methyltransferase [Pseudomonas aeruginosa] Length = 696 Score = 44.7 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 I DLF G GG LE + + NP ++ ++AN P+T D+ I Sbjct: 28 IVDLFAGGGGASTGLEMG---LGRKVDLAINHNPAAISMHEANHPHTEHLPTDVWGIDPI 84 Query: 63 D 63 D Sbjct: 85 D 85 >gi|75906954|ref|YP_321250.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] gi|75700679|gb|ABA20355.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413] Length = 385 Score = 44.7 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 33/107 (30%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA-----NFPNTLIFG---- 54 I F G G + L E + +EI + Y+ N P T +G Sbjct: 7 IFSFFAGSGLLDLGFE----TSGFNIVYVNEIFSPFMAAYRYSREILNLP-TPQYGYYQG 61 Query: 55 ---DIAKIKTQDIPD---HDVL------------LAGFPCQPFSQAG 83 D++K+ + P D++ + G PC FS G Sbjct: 62 DTADVSKL-VEGFPAKRLLDLVQDCRKSNNIVGFIGGPPCPDFSIGG 107 >gi|21428368|gb|AAM49844.1| GM14972p [Drosophila melanogaster] Length = 331 Score = 44.7 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 31/73 (42%), Gaps = 5/73 (6%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDIPD--HDVL 70 + + + + ++N + Y N+ + L+ +I + +++ ++L Sbjct: 1 MHYAFNYA--QLDGQIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQANML 58 Query: 71 LAGFPCQPFSQAG 83 L PCQP ++ G Sbjct: 59 LMSPPCQPHTRQG 71 >gi|289669548|ref|ZP_06490623.1| DNA-cytosine methyltransferase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 330 Score = 44.7 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 13/76 (17%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIPD------ 66 + + ++ + +++ +T+ NFP I I ++ T ++ D Sbjct: 1 MDIGIKAA----GFDIKAATDAERLCQETFAENFPGIPFIVRRIGELSTAELLDAAGLAP 56 Query: 67 --HDVLLAGFPCQPFS 80 D+L+ G PC FS Sbjct: 57 GEVDLLVGGPPCPSFS 72 >gi|116062018|dbj|BAF34637.1| chromomethylase [Brassica rapa] Length = 805 Score = 44.7 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 6/64 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + DL+CG G + L ++ ++ + Y+V++ + N P T+ + Sbjct: 246 TMLDLYCGCGAMSTGLCMGAQLSGLKLVTKWAVDTCEYAVQSIKYNHPETV----VRNES 301 Query: 61 TQDI 64 +D Sbjct: 302 AEDF 305 Score = 34.7 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 8/14 (57%) Query: 67 HDVLLAGFPCQPFS 80 DV+ G PCQ S Sbjct: 422 VDVVCGGPPCQGIS 435 >gi|212637209|ref|YP_002313734.1| C-5 cytosine-specific DNA methylase [Shewanella piezotolerans WP3] gi|212558693|gb|ACJ31147.1| C-5 cytosine-specific DNA methylase [Shewanella piezotolerans WP3] Length = 510 Score = 44.7 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 39/136 (28%), Gaps = 58/136 (42%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKT------YQA--------- 45 + DLF G GG+ + + S E P + KT Y+ Sbjct: 8 VIDLFAGPGGLGEGVSSVADGDGNKPFRIGVSVEKEPSAHKTLTTRAFYRKIKVLDGGLE 67 Query: 46 ---NF----------------------------------PNTLIFGDIAK-IKTQDIPDH 67 N+ N LI I + I T P Sbjct: 68 DYFNYVRGKLTRDEIFELYPQQAQEAIYETLEEPRALGEDNDLIHSRIRELIITHQGPK- 126 Query: 68 DVLLAGFPCQPFSQAG 83 V++ G PCQ +S AG Sbjct: 127 -VVIGGPPCQAYSLAG 141 >gi|228950081|ref|ZP_04112266.1| Type II DNA-methyltransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228809608|gb|EEM56044.1| Type II DNA-methyltransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 463 Score = 44.7 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 5/82 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + + + G GGI + + E+ + + NF + ++ D+ I Sbjct: 126 ISLLSVCAG-GGI--GTASFVDTQYFTSIAEIELEEDCCEAIRHNFSSFIMNCDVRDINV 182 Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83 +P DV+ PC FS G Sbjct: 183 --VPKVDVINCTIPCNNFSTLG 202 >gi|167725800|ref|ZP_02409036.1| putative cytosine-specific modification methylase [Burkholderia pseudomallei DM98] Length = 661 Score = 44.7 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIKTQ 62 I D F G GG LE+ F + + ++ + AN P+T + + + I Sbjct: 17 IVDNFAGGGGASTGLERAFGRP---VDVAINHDREALAMHAANHPHTAHYCESVFDIDPV 73 Query: 63 DI---PDHDVLLAGFPCQPFSQA 82 +I ++ C+ FS+A Sbjct: 74 EITGNRPVGLVWLSPDCKHFSKA 96 >gi|295105242|emb|CBL02786.1| C-5 cytosine-specific DNA methylase. [Faecalibacterium prausnitzii SL3/3] Length = 306 Score = 44.7 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 12/75 (16%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + LF GIGG L E T+ ++SEI + + + F N Sbjct: 233 TLGSLFDGIGGFPLVWETTYGKGTAR--WASEIEEFPIAVTKRRFGND---------SEN 281 Query: 63 DIPDHDVLLAGFPCQ 77 + VL G CQ Sbjct: 282 EGNSGTVLCGGN-CQ 295 >gi|308807833|ref|XP_003081227.1| MET-10+related protein-like (ISS) [Ostreococcus tauri] gi|116059689|emb|CAL55396.1| MET-10+related protein-like (ISS) [Ostreococcus tauri] Length = 1020 Score = 44.4 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 3/44 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 I DLF GIG L Q + ++ E NP S + + N Sbjct: 476 TIVDLFAGIGYYTL---QLLKNAGAAKVYACEWNPNSCEALRYN 516 >gi|207725408|ref|YP_002255804.1| phage methyltransferase protein [Ralstonia solanacearum MolK2] gi|206590644|emb|CAQ37606.1| putative phage methyltransferase protein [Ralstonia solanacearum MolK2] Length = 363 Score = 44.4 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIP------------------- 65 + +EI+P++ + P + DI ++ ++ Sbjct: 26 YYNEIDPFAAAWLRNLIAAGHIAPGDVDERDIQDVQPDELRGYRQHHFFAGIGVWSLALR 85 Query: 66 ------DHDVLLAGFPCQPFSQAG 83 D V PCQPFSQAG Sbjct: 86 RAGWPDDRPVWTGSCPCQPFSQAG 109 >gi|289192747|ref|YP_003458688.1| protein of unknown function Met10 [Methanocaldococcus sp. FS406-22] gi|288939197|gb|ADC69952.1| protein of unknown function Met10 [Methanocaldococcus sp. FS406-22] Length = 336 Score = 44.4 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 27/66 (40%), Gaps = 13/66 (19%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 + D+F G+G + + ++ +INP++++ + N I D+ Sbjct: 199 VVDMFAGVGPFSIACKNAKK------IYAIDINPHAIELLKKNIKLNKLEHKIIPILSDV 252 Query: 57 AKIKTQ 62 ++ + Sbjct: 253 REVDVK 258 >gi|265755712|ref|ZP_06090333.1| LOW QUALITY PROTEIN: site-specific DNA-methyltransferase [Bacteroides sp. 3_1_33FAA] gi|263234318|gb|EEZ19911.1| LOW QUALITY PROTEIN: site-specific DNA-methyltransferase [Bacteroides sp. 3_1_33FAA] Length = 296 Score = 44.4 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 12/17 (70%), Positives = 13/17 (76%) Query: 67 HDVLLAGFPCQPFSQAG 83 D+L GFPCQPFS AG Sbjct: 4 IDILTGGFPCQPFSVAG 20 >gi|70887603|ref|NP_001020621.1| DNA (cytosine-5)-methyltransferase 3B [Danio rerio] gi|62433261|dbj|BAD95478.1| DNA methyltransferase [Danio rerio] Length = 816 Score = 44.4 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +++ LF GI L L ++ +SE+ S+ + + D+ I Sbjct: 538 IRVLSLFDGIATGYLVLRDLGFKVDLYI--ASEVCEDSISVGAVRHEGKIQYVHDVRNIT 595 Query: 61 TQDIPD---HDVLLAGFPCQPFSQ 81 ++I + D+++ G PC S Sbjct: 596 RKNIAEWGPFDMVIGGSPCNDLSI 619 >gi|167045163|gb|ABZ09825.1| putative C-5 cytosine-specific DNA methylase [uncultured marine microorganism HF4000_APKG8K5] Length = 340 Score = 44.4 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 13/69 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFF----SSEINPYSVKTYQAN-FPNTLIFGDIAK 58 + DLF G GG+ + + + E F S E NP + +T Q F + + Sbjct: 10 VIDLFAGPGGLSEGFSRFSSFKGSEVDFRIRLSIEKNPIAKRTLQLRSF--------VRQ 61 Query: 59 IKTQDIPDH 67 ++P+ Sbjct: 62 FPEDELPEV 70 >gi|115313010|gb|AAI24099.1| DNA (cytosine-5-)-methyltransferase 4 [Danio rerio] Length = 816 Score = 44.4 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +++ LF GI L L ++ +SE+ S+ + + D+ I Sbjct: 538 IRVLSLFDGIATGYLVLRDLGFKVDLYI--ASEVCEDSISVGAVRHEGKIQYVHDVRNIT 595 Query: 61 TQDIPD---HDVLLAGFPCQPFSQ 81 ++I + D+++ G PC S Sbjct: 596 RKNIAEWGPFDMVIGGSPCNDLSI 619 >gi|15669073|ref|NP_247878.1| hypothetical protein MJ_0883 [Methanocaldococcus jannaschii DSM 2661] gi|3024916|sp|Q58293|TRM5B_METJA RecName: Full=tRNA (guanine-N(1)-)-methyltransferase Trm5b; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase gi|258588221|pdb|2ZZN|A Chain A, The Complex Structure Of Atrm5 And Trnacys gi|258588222|pdb|2ZZN|B Chain B, The Complex Structure Of Atrm5 And Trnacys gi|1499713|gb|AAB98887.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 336 Score = 44.4 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 27/66 (40%), Gaps = 13/66 (19%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 + D+F G+G + + ++ +INP++++ + N I D+ Sbjct: 199 VVDMFAGVGPFSIACKNAKK------IYAIDINPHAIELLKKNIKLNKLEHKIIPILSDV 252 Query: 57 AKIKTQ 62 ++ + Sbjct: 253 REVDVK 258 >gi|120599327|ref|YP_963901.1| C-5 cytosine-specific DNA methylase [Shewanella sp. W3-18-1] gi|120559420|gb|ABM25347.1| C-5 cytosine-specific DNA methylase [Shewanella sp. W3-18-1] Length = 556 Score = 44.4 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG----D 55 I D F G GG + S +I + ++ + AN P TL + D Sbjct: 5 IVDNFAGGGGASTGMAWALGR-------SVDIAINHDQDAIAMHSANHPETLHYCESVFD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 + ++ D+ C+ FS+A Sbjct: 58 VEPLQATAGKPVDLAWFSPDCKHFSKA 84 >gi|332667836|ref|YP_004450624.1| hypothetical protein Halhy_5928 [Haliscomenobacter hydrossis DSM 1100] gi|332336650|gb|AEE53751.1| hypothetical protein Halhy_5928 [Haliscomenobacter hydrossis DSM 1100] Length = 246 Score = 44.4 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 11/79 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ DLFC GG + + + + +P Q N+P D + Sbjct: 6 RLLDLFCKQGGCSMGYHRA----GFDVVG-VDKDP------QPNYPFEFHQADALEYLAT 54 Query: 63 DIPDHDVLLAGFPCQPFSQ 81 D++ A PCQ +S+ Sbjct: 55 HGHLFDIIHASPPCQGYSR 73 >gi|330797774|ref|XP_003286933.1| hypothetical protein DICPUDRAFT_150953 [Dictyostelium purpureum] gi|325083099|gb|EGC36561.1| hypothetical protein DICPUDRAFT_150953 [Dictyostelium purpureum] Length = 58 Score = 44.4 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ 44 L++ + + GIGG+ L+++ E S +IN ++ Y+ Sbjct: 18 LRVLEFYSGIGGMHYGLKESGVK--FEVVQSFDINTNAILNYK 58 >gi|159474758|ref|XP_001695492.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas reinhardtii] gi|158275975|gb|EDP01750.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas reinhardtii] Length = 1663 Score = 44.4 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 3/48 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53 D+F G GG+ L L Q+ + ++ E + + ++AN P + Sbjct: 1094 DIFAGAGGLSLGLHQSGVA---DTRYAVEFDTAAAAAFRANHPGVAVH 1138 Score = 35.9 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 10/14 (71%) Query: 67 HDVLLAGFPCQPFS 80 D+L+ G PCQ FS Sbjct: 1204 VDLLVGGPPCQGFS 1217 >gi|256811407|ref|YP_003128776.1| protein of unknown function Met10 [Methanocaldococcus fervens AG86] gi|256794607|gb|ACV25276.1| protein of unknown function Met10 [Methanocaldococcus fervens AG86] Length = 336 Score = 44.4 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 27/66 (40%), Gaps = 13/66 (19%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 + D+F G+G + + ++ +INP++++ + N I D+ Sbjct: 199 VVDMFAGVGPFSIACKNAKK------IYAIDINPHAIELLKKNIKLNKLEHKIIPILSDV 252 Query: 57 AKIKTQ 62 ++ + Sbjct: 253 REVDVK 258 >gi|13476615|ref|NP_108185.1| DNA modification methylase [Mesorhizobium loti MAFF303099] gi|14027377|dbj|BAB53646.1| mlr7992 [Mesorhizobium loti MAFF303099] Length = 390 Score = 44.4 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 30/91 (32%), Gaps = 18/91 (19%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----------FPNTLIF 53 I L G G+ L +E E ++V A+ P I+ Sbjct: 10 ILSLCTGGAGLDLGVELAIPSA--RTVCMVEREAFAV----AHLVSAMEQGLLHP-APIW 62 Query: 54 GDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83 D + D L+ G PCQP S AG Sbjct: 63 SDARTFDGRAWRGCVDGLVGGIPCQPHSLAG 93 >gi|18977787|ref|NP_579144.1| met-10+ protein [Pyrococcus furiosus DSM 3638] gi|18893532|gb|AAL81539.1| met-10+ protein [Pyrococcus furiosus DSM 3638] Length = 333 Score = 44.4 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 11/63 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIFGDIA 57 + D+F G+G + L + + F+ +INP+++K + N F I GD+ Sbjct: 187 VFDMFAGVGPYSILLSR-----KAKLVFACDINPWAIKYLEENIRLNKSFNVIPILGDVR 241 Query: 58 KIK 60 K+ Sbjct: 242 KVS 244 >gi|163716644|gb|ABY40554.1| putative site-specific DNA methylase [Burkholderia phage Bups phi1] Length = 334 Score = 44.4 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIKTQ 62 I D F G GG LE+ F + + ++ + AN P+T + + + I Sbjct: 17 IVDNFAGGGGASTGLERAFGRP---VDVAINHDREALAMHAANHPHTAHYCESVFDIDPV 73 Query: 63 DI---PDHDVLLAGFPCQPFSQA 82 +I ++ C+ FS+A Sbjct: 74 EITGNRPVGLVWLSPDCKHFSKA 96 >gi|26553946|ref|NP_757880.1| cytosine-specific DNA methyltransferase [Mycoplasma penetrans HF-2] gi|26453954|dbj|BAC44284.1| cytosine-specific DNA methyltransferase [Mycoplasma penetrans HF-2] Length = 395 Score = 44.4 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 8/54 (14%) Query: 35 INPYSVKTY----QANFPNTLIFGDIAKIKTQDIPD-HDVLLAGFPCQPFSQAG 83 IN +Y + +F N DI K+ + P D+ FPCQ S G Sbjct: 92 INNTIKASYLNYAKKHFNNLF---DIKKVNKDNFPKNIDIFTYSFPCQDLSVQG 142 >gi|13541905|ref|NP_111593.1| methyltransferase [Thermoplasma volcanium GSS1] gi|14325337|dbj|BAB60241.1| hypothetical protein [Thermoplasma volcanium GSS1] Length = 334 Score = 44.4 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 12/79 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFG 54 + + D+F GIG L + + + + + +INP ++K + N I G Sbjct: 182 MTVLDMFAGIGYFTLPAVKYGHAEHTD---ACDINPEAIKFLKKNLSANGISKSVKPICG 238 Query: 55 DIAKIKTQDIPDHDVLLAG 73 D I +D+++ G Sbjct: 239 DAR--IACPIKAYDLIIMG 255 >gi|194224302|ref|XP_001916549.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 3 beta [Equus caballus] Length = 774 Score = 44.4 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT--YQANFPNTLIF----GD 55 +++ LF GI L L++ +SE+ S+ + + D Sbjct: 558 IRVLSLFDGIATGYLVLKELGIKVKY---VASEVCEESIAVGSLKHERQLSKXCXMTSRD 614 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFS 80 I K ++ D+++ G PC S Sbjct: 615 ITKRNIEEWGPFDLVIGGSPCNDLS 639 >gi|241758593|ref|ZP_04756708.1| site-specific DNA-methyltransferase [Neisseria flavescens SK114] gi|241321245|gb|EER57417.1| site-specific DNA-methyltransferase [Neisseria flavescens SK114] Length = 364 Score = 44.0 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 26/102 (25%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA-------------NFPNT 50 I F G G + L E + E F +E++P ++ Y+ F + Sbjct: 2 IFSFFSGSGFLDLGFELS----GFEIAFVNEVHPPFLEAYKYSRSKMGIPKPKYGYFEGS 57 Query: 51 LIF-------GDIAKIKTQDIPDHDVL--LAGFPCQPFSQAG 83 + D++ ++ D ++ + G PC FS AG Sbjct: 58 IDECLDMEKARDLSSWVKKEKQDGVIVGFIGGPPCPDFSVAG 99 >gi|261403494|ref|YP_003247718.1| protein of unknown function Met10 [Methanocaldococcus vulcanius M7] gi|261370487|gb|ACX73236.1| protein of unknown function Met10 [Methanocaldococcus vulcanius M7] Length = 336 Score = 44.0 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 13/66 (19%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 + D+F G+G + ++ +INP++++ + N I D+ Sbjct: 199 VVDMFAGVGPFSIACRNAKK------IYAIDINPHAIELLKKNIKLNKLEHKIIPILSDV 252 Query: 57 AKIKTQ 62 ++ + Sbjct: 253 REVDVK 258 >gi|242211531|ref|XP_002471603.1| predicted protein [Postia placenta Mad-698-R] gi|220729279|gb|EED83156.1| predicted protein [Postia placenta Mad-698-R] Length = 2531 Score = 44.0 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 11/70 (15%) Query: 22 FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD----------IP-DHDVL 70 + E FS EI P+ + NF L+F D+ ++ +P D D+L Sbjct: 164 GVNMEFEHVFSCEIEPFKQAYIERNFKPPLLFRDVCELGDSHATTAYGSLAPVPGDVDIL 223 Query: 71 LAGFPCQPFS 80 +AG C +S Sbjct: 224 IAGTSCVDYS 233 >gi|85710862|ref|ZP_01041923.1| modification methylase (Cytosine-specific methyltransferase) [Idiomarina baltica OS145] gi|85695266|gb|EAQ33203.1| modification methylase (Cytosine-specific methyltransferase) [Idiomarina baltica OS145] Length = 515 Score = 44.0 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 38/135 (28%), Gaps = 55/135 (40%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKT------YQ---------- 44 + DLF G GG+ + + S E P + KT Y+ Sbjct: 8 VIDLFAGPGGLGEGISSVADVDGSYPFRIGVSVEKEPSAHKTLTTRAFYRKIKNSELGLA 67 Query: 45 ----------------ANFP------------NTLIFGDIAKIKTQDIPDH-----D--- 68 A FP GD K I + D Sbjct: 68 YYNDYLMGAYTREELFAYFPIEAEESLRETLYTPHALGDDNKEIHSRISELVKAHGDKPR 127 Query: 69 VLLAGFPCQPFSQAG 83 V++ G PCQ +S AG Sbjct: 128 VVIGGPPCQAYSLAG 142 >gi|282859818|ref|ZP_06268912.1| Eco57I restriction endonuclease [Prevotella bivia JCVIHMP010] gi|282587438|gb|EFB92649.1| Eco57I restriction endonuclease [Prevotella bivia JCVIHMP010] Length = 851 Score = 44.0 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 26/100 (26%) Query: 3 KITDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN----FPNTLIFGDI 56 LF G+G F N C + E+ +K + N + + I GD+ Sbjct: 27 TYVSLFSSAGVGC------YGFKQENFYCIATVELLERRLKIQKYNQKCAYDSGYICGDM 80 Query: 57 AKIKTQ--------------DIPDHDVLLAGFPCQPFSQA 82 + +TQ ++ D DV++A PCQ S A Sbjct: 81 TQKETQGRVFEELDLWKRNFNVKDLDVIIATPPCQGMSVA 120 >gi|224503828|ref|ZP_03672135.1| hypothetical protein LmonFR_15252 [Listeria monocytogenes FSL R2-561] gi|255030128|ref|ZP_05302079.1| hypothetical protein LmonL_15486 [Listeria monocytogenes LO28] Length = 33 Score = 44.0 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 15/27 (55%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE 28 + DLF GIGG RL +E+ R E Sbjct: 1 MNFLDLFAGIGGFRLGMERNAELRRGE 27 >gi|296416157|ref|XP_002837747.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633630|emb|CAZ81938.1| unnamed protein product [Tuber melanosporum] Length = 2127 Score = 44.0 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 11/73 (15%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ--------DIP---DH 67 Q ++E FS EI Y + NF ++F D+ ++ +P + Sbjct: 207 SQGIGKLDIEHVFSCEIELYKQAYIERNFKPPILFRDVRELGEDVATTAYGAKVPVPGNV 266 Query: 68 DVLLAGFPCQPFS 80 D+L+AG C FS Sbjct: 267 DLLIAGTSCVDFS 279 >gi|222107089|ref|YP_002547880.1| DNA-cytosine methyltransferase [Agrobacterium vitis S4] gi|221738268|gb|ACM39164.1| DNA-cytosine methyltransferase [Agrobacterium vitis S4] Length = 390 Score = 44.0 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 10/88 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA------NFPNTLIFGDI 56 I L G GG+ L +E E ++ + P ++ D Sbjct: 11 NIISLCTGGGGLDLAVELAVPSA--RTVCMVEREGFACGALVSAMEAGLMAP-APVWSDA 67 Query: 57 AKIKTQDIPD-HDVLLAGFPCQPFSQAG 83 + D L+ G PCQP S AG Sbjct: 68 RTFNGRPWRGLVDGLIGGIPCQPHSLAG 95 >gi|126342952|ref|XP_001374866.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 475 Score = 44.0 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 10/70 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDI 56 + DL+ GIG L H N + E +P++ + N + GD Sbjct: 261 LVDLYAGIGYFTLPF---LIHANAAFVHACEWDPHAATALKKNLELNSVADRCCIHLGDN 317 Query: 57 AKIKTQDIPD 66 K+K + I D Sbjct: 318 RKLKLRSIAD 327 >gi|296087643|emb|CBI34899.3| unnamed protein product [Vitis vinifera] Length = 512 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 15/87 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---DIAK 58 + + LF GIGG + L + ++ + EI+ + ++ + T G DIA Sbjct: 414 ITLLSLFSGIGGAEIALHRLG--IPLKNVVAVEISETNRNILRSWWEQTNQRGTLVDIAD 471 Query: 59 IK----------TQDIPDHDVLLAGFP 75 ++ D+++ P Sbjct: 472 VQQLNGDRLEQLIHTFGGFDLIVVTSP 498 >gi|126667824|ref|ZP_01738791.1| C-5 cytosine-specific DNA methylase [Marinobacter sp. ELB17] gi|126627772|gb|EAZ98402.1| C-5 cytosine-specific DNA methylase [Marinobacter sp. ELB17] Length = 327 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 31/91 (34%), Gaps = 10/91 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEIN-PYSVKTYQANFPNTLIFGD-IA 57 L + F G G + L F ++ + EI Y + +AN P I Sbjct: 53 LNVVSAFSGAGVMDRALHDGFQSAGIKLRTMLTIEIEGKYVDASLKAN-PELFDRNSVIV 111 Query: 58 KIKTQD-----IPDHDVLLAGFPCQPFSQAG 83 QD DV AG PC S AG Sbjct: 112 NTPIQDTCITGTAYSDVFWAGIPCLGSSLAG 142 >gi|15828656|ref|NP_326016.1| CpG DNA methylase (cytosine-specific methyltransferase SSSI) [Mycoplasma pulmonis UAB CTIP] gi|14089598|emb|CAC13358.1| CPG DNA METHYLASE (CYTOSINE-SPECIFIC METHYLTRANSFERASE SSSI) [Mycoplasma pulmonis] Length = 82 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 3/52 (5%) Query: 2 LKITDLFCGIGGIRLDLEQTFN---HRNVECFFSSEINPYSVKTYQANFPNT 50 L + + F GIG R LE N + + +SE + Y+ +Y NT Sbjct: 15 LNVFETFAGIGAQRRALENVKNKNPNFEYKIVATSEWDMYANISYDLIHHNT 66 >gi|312213040|emb|CBX93122.1| hypothetical protein [Leptosphaeria maculans] Length = 757 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 31/90 (34%), Gaps = 17/90 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 I D+FCG GG Q H + +++ +++ Y+ N P F Sbjct: 329 YTIGDVFCGFGGASQGAAQAGLH----VAWGLDVDQQALRAYKMNHPGASGF----LCNA 380 Query: 62 QDIPD---------HDVLLAGFPCQPFSQA 82 D P VL PC FS A Sbjct: 381 HDFPPPGKTKEELRVHVLHLSPPCCFFSPA 410 >gi|309267827|ref|XP_001004878.2| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like [Mus musculus] Length = 763 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60 +++ LF GI L L++ VE + +SE+ S+ + DI I Sbjct: 485 IRVLSLFDGIATGYLVLKELGIK--VEKYIASEVCAESIAVGTVKHEGQIKYVDDIRNIT 542 Query: 61 TQDIPD---HDVLLAGFPCQPFS 80 + I + D+++ G PC S Sbjct: 543 KEHIDEWGPFDLVIGGSPCNDLS 565 >gi|308183510|ref|YP_003927637.1| hypothetical protein HPPC_06895 [Helicobacter pylori PeCan4] gi|308065695|gb|ADO07587.1| hypothetical protein HPPC_06895 [Helicobacter pylori PeCan4] Length = 48 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 7/46 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSV 40 IT LF G GG+ L FN N + ++++++ +V Sbjct: 3 FTITSLFSGCGGLDLGFCGGFNFLNRHYAKNPFKIIYANDLDKNAV 48 >gi|254252470|ref|ZP_04945788.1| Site-specific DNA methylase [Burkholderia dolosa AUO158] gi|124895079|gb|EAY68959.1| Site-specific DNA methylase [Burkholderia dolosa AUO158] Length = 669 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFGD-IAK 58 I D F G GG LE+ F +I +P ++ + AN P T + + + Sbjct: 17 IVDNFAGGGGASTGLERAFGRP-------VDIAINHDPEALAMHAANHPRTKHYCESVFD 69 Query: 59 IKTQDIP---DHDVLLAGFPCQPFSQA 82 + +I ++ C+ FS+A Sbjct: 70 VDPIEITGNQPVGLVWLSPDCKHFSKA 96 >gi|167764508|ref|ZP_02436629.1| hypothetical protein BACSTE_02897 [Bacteroides stercoris ATCC 43183] gi|167697177|gb|EDS13756.1| hypothetical protein BACSTE_02897 [Bacteroides stercoris ATCC 43183] Length = 856 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 26/100 (26%) Query: 3 KITDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPY--SVKTYQAN--FPNTLIFGDI 56 LF G+G F C + E+ +++Y + + I GD+ Sbjct: 29 TYISLFSSAGVGC------YGFKEEGFYCIATVELLERRLKIQSYNHKCAYKSGYICGDM 82 Query: 57 AKIKTQD--------------IPDHDVLLAGFPCQPFSQA 82 +T+D + D DVL+A PCQ S A Sbjct: 83 TLQETKDKVFNELTLWKSALNVTDLDVLIATPPCQGMSVA 122 >gi|190338655|gb|AAI62582.1| Dnmt6 protein [Danio rerio] Length = 728 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI- 59 +++ LF GI L L + VE + +SE+ S+ +++ GD+ ++ Sbjct: 451 IRVLSLFDGIATGLLVLRELG--IQVERYVASEVCEDSITVGIVRHQGRIMYVGDVRQLT 508 Query: 60 --KTQDIPDHDVLLAGFPCQPFSQ 81 Q+ D+++ G PC S Sbjct: 509 RKNIQEWGPFDLVIGGSPCNDLSI 532 >gi|66392184|ref|NP_001018150.1| DNA (cytosine-5)-methyltransferase 3A [Danio rerio] gi|62433265|dbj|BAD95480.1| DNA methyltransferase [Danio rerio] Length = 731 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI- 59 +++ LF GI L L + VE + +SE+ S+ +++ GD+ ++ Sbjct: 451 IRVLSLFDGIATGLLVLRELG--IQVERYVASEVCEDSITVGIVRHQGRIMYVGDVRQLT 508 Query: 60 --KTQDIPDHDVLLAGFPCQPFSQ 81 Q+ D+++ G PC S Sbjct: 509 RKNIQEWGPFDLVIGGSPCNDLSI 532 >gi|219117139|ref|XP_002179364.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409255|gb|EEC49187.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 947 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 14/68 (20%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----------KTQDIPD----HDVLLA 72 +E FS EI P+ + NF L+F DI ++ +D+P+ DVL+A Sbjct: 407 IEHVFSCEIEPFKQAYIERNFRPPLLFRDIRELGQPQAYTAYGALRDVPNRPGCVDVLVA 466 Query: 73 GFPCQPFS 80 G C +S Sbjct: 467 GTSCVDYS 474 >gi|170739771|ref|YP_001768426.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46] gi|168194045|gb|ACA15992.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46] Length = 434 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 25/79 (31%) Query: 27 VECFFSSEINPYSVKTYQAN----------FPNTLIFGDIAKIKTQDI------------ 64 FS E +P + TY+ N +P+ L + +++ Sbjct: 24 FSILFSVEAHPDAFATYRHNLLDARPDQHVWPSWLEK---RAWRAEELFTTHRAELVGLR 80 Query: 65 PDHDVLLAGFPCQPFSQAG 83 D+L G PCQ FS G Sbjct: 81 GKVDLLAGGPPCQGFSTNG 99 >gi|309264629|ref|XP_003086323.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like [Mus musculus] Length = 740 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60 +++ LF GI L L++ VE + +SE+ S+ + DI I Sbjct: 462 IRVLSLFDGIATGYLVLKELGIK--VEKYIASEVCAESIAVGTVKHEGQIKYVDDIRNIT 519 Query: 61 TQDIPD---HDVLLAGFPCQPFS 80 + I + D+++ G PC S Sbjct: 520 KEHIDEWGPFDLVIGGSPCNDLS 542 >gi|149030966|gb|EDL85993.1| rCG37517, isoform CRA_b [Rattus norvegicus] Length = 839 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 8/84 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI--NPYSVKTYQANFPNTLIFGDIAKI 59 +++ LF GI L L+ VE + +SE+ +V T + D+ KI Sbjct: 561 IRVLSLFDGIATGYLVLKDLGIK--VEKYVASEVCAESIAVGTIKHE-GQIKYVNDVRKI 617 Query: 60 KTQDIPD---HDVLLAGFPCQPFS 80 ++I + D+++ G PC S Sbjct: 618 TKKNIEEWGPFDLVIGGSPCNDLS 641 >gi|149030967|gb|EDL85994.1| rCG37517, isoform CRA_c [Rattus norvegicus] Length = 796 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 8/84 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI--NPYSVKTYQANFPNTLIFGDIAKI 59 +++ LF GI L L+ VE + +SE+ +V T + D+ KI Sbjct: 581 IRVLSLFDGIATGYLVLKDLGIK--VEKYVASEVCAESIAVGTIKHE-GQIKYVNDVRKI 637 Query: 60 KTQDIPD---HDVLLAGFPCQPFS 80 ++I + D+++ G PC S Sbjct: 638 TKKNIEEWGPFDLVIGGSPCNDLS 661 >gi|51556273|ref|NP_001003959.1| DNA (cytosine-5)-methyltransferase 3B [Rattus norvegicus] gi|50539393|tpe|CAE52319.1| TPA: putative DNA (cytosine-5) methyltransferase 3b [Rattus norvegicus] gi|149030965|gb|EDL85992.1| rCG37517, isoform CRA_a [Rattus norvegicus] Length = 859 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 8/84 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI--NPYSVKTYQANFPNTLIFGDIAKI 59 +++ LF GI L L+ VE + +SE+ +V T + D+ KI Sbjct: 581 IRVLSLFDGIATGYLVLKDLGIK--VEKYVASEVCAESIAVGTIKHE-GQIKYVNDVRKI 637 Query: 60 KTQDIPD---HDVLLAGFPCQPFS 80 ++I + D+++ G PC S Sbjct: 638 TKKNIEEWGPFDLVIGGSPCNDLS 661 >gi|290956749|ref|YP_003487931.1| modification methylase [Streptomyces scabiei 87.22] gi|260646275|emb|CBG69370.1| putative modification methylase [Streptomyces scabiei 87.22] Length = 400 Score = 44.0 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 34 EINPYSVKTYQANFPNTLIFGDIAKIKTQDI-PDHDVLLAGFPCQPFSQAG 83 E + ++ KT +A I D+A + D L+A PCQ +S AG Sbjct: 4 EWDEWACKT-RAAAGQLTIRTDVALYPVRPFLGRTDGLIASPPCQAWSMAG 53 >gi|254467075|ref|ZP_05080486.1| DNA-cytosine methyltransferase [Rhodobacterales bacterium Y4I] gi|206687983|gb|EDZ48465.1| DNA-cytosine methyltransferase [Rhodobacterales bacterium Y4I] Length = 497 Score = 44.0 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 39/130 (30%), Gaps = 50/130 (38%) Query: 4 ITDLFCGIGGIRLDLEQTFN--HRNVECFFSSE-----------------INPYSVKTYQ 44 I DLF G GG+ Q ++ S E + + Y Sbjct: 7 IIDLFAGPGGLGEGFSQAGRVVDAQMKIHLSVEMDHHAIQTLRLRAFLRSFDEIPQEYYD 66 Query: 45 A-N----FPN---------TLIFGDIAK-------------IKTQDIPDHD----VLLAG 73 A N FP+ L ++ + ++ + +L+ G Sbjct: 67 ALNRGEQFPDWSELYPSNWRLAEREVRQRVLGAQGVFDELAVELDHAREAHNGNTILIGG 126 Query: 74 FPCQPFSQAG 83 PCQ +S AG Sbjct: 127 PPCQAYSLAG 136 >gi|119512988|ref|ZP_01632048.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414] gi|119462362|gb|EAW43339.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414] Length = 424 Score = 44.0 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 33/89 (37%), Gaps = 17/89 (19%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-------SVKTYQANFPN---TLIFGDI 56 LF G GG+ + Q + + E +P +T+ NF +I + Sbjct: 99 LFSGGGGVEAGMLQA----GIRPAIAVEYDPTKPKLSRAISQTHHCNFSEYRCKVIQQTV 154 Query: 57 AKIKT---QDIPDHDVLLAGFPCQPFSQA 82 ++ Q P D L A C FSQA Sbjct: 155 QEVAASGFQGFPQPDYLHASPVCANFSQA 183 >gi|149030968|gb|EDL85995.1| rCG37517, isoform CRA_d [Rattus norvegicus] Length = 776 Score = 44.0 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 8/84 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI--NPYSVKTYQANFPNTLIFGDIAKI 59 +++ LF GI L L+ VE + +SE+ +V T + D+ KI Sbjct: 561 IRVLSLFDGIATGYLVLKDLGIK--VEKYVASEVCAESIAVGTIKHE-GQIKYVNDVRKI 617 Query: 60 KTQDIPD---HDVLLAGFPCQPFS 80 ++I + D+++ G PC S Sbjct: 618 TKKNIEEWGPFDLVIGGSPCNDLS 641 >gi|294056254|ref|YP_003549912.1| DNA-cytosine methyltransferase [Coraliomargarita akajimensis DSM 45221] gi|293615587|gb|ADE55742.1| DNA-cytosine methyltransferase [Coraliomargarita akajimensis DSM 45221] Length = 518 Score = 44.0 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 36/133 (27%), Gaps = 58/133 (43%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ------------AN-----F 47 D+F G GG+ + S E++ ++ T + N F Sbjct: 9 IDIFAGPGGLAEGFSNA----GFDIRLSVEMDEHAHNTLRFRSFCRKLRKAGKNNELIEF 64 Query: 48 ---PNTLIFGDIAKIKTQDI----------------------------------PDHDVL 70 P + D K+ + + P VL Sbjct: 65 YSKPESDNTFDQTKLTAKHVRLWKHAEKEAMQATLGETPAKEVSDRIEAALGKEPKDWVL 124 Query: 71 LAGFPCQPFSQAG 83 L G PCQ +S G Sbjct: 125 LGGPPCQAYSLVG 137 >gi|126303513|ref|XP_001380132.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha [Monodelphis domestica] Length = 913 Score = 44.0 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 635 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRN 690 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 691 VTQKHIQEWGPFDLVIGGSPCNDLSI 716 >gi|67514593|ref|NP_001020003.1| DNA (cytosine-5)-methyltransferase 3A [Gallus gallus] gi|82227308|sp|Q4W5Z4|DNM3A_CHICK RecName: Full=DNA (cytosine-5)-methyltransferase 3A; Short=Dnmt3a gi|66766324|dbj|BAD99023.1| DNA methyltransferase 3A [Gallus gallus] Length = 877 Score = 44.0 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 599 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRN 654 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 655 VTQKHIQEWGPFDLVIGGSPCNDLSI 680 >gi|221125682|ref|XP_002166528.1| PREDICTED: similar to tRNA methyltransferase 12 homolog [Hydra magnipapillata] Length = 350 Score = 44.0 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 5/44 (11%) Query: 4 ITDLFCGIGGIRLD-LEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF GIG L L + H ++ E NP ++ + N Sbjct: 164 VVDLFAGIGYFTLPYLVKARAH----TVYACEWNPNAIIALKRN 203 >gi|170086666|ref|XP_001874556.1| predicted protein [Laccaria bicolor S238N-H82] gi|164649756|gb|EDR13997.1| predicted protein [Laccaria bicolor S238N-H82] Length = 1926 Score = 44.0 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 11/73 (15%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD----------IP-DH 67 +Q + ++E FS EI P+ + NF L+F D+ ++ + +P D Sbjct: 88 KQHGVNFDIEHVFSCEIEPFKQAYIERNFQPPLLFRDVCELGDGEAHTAYGALAPVPGDV 147 Query: 68 DVLLAGFPCQPFS 80 D+L+AG C +S Sbjct: 148 DILIAGTSCVDYS 160 >gi|325093103|gb|EGC46413.1| SNF2 family helicase [Ajellomyces capsulatus H88] Length = 2239 Score = 44.0 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 14/76 (18%) Query: 18 LEQTFNHR-NVECFFSSEINPYSVKTY-QANFPNTLIFGDIAKIKTQD----------IP 65 ++ F + N+ FS+EI+P+ ++Y Q NF +IF D+ ++ + +P Sbjct: 203 FKKIFGQKFNMRHLFSAEIDPF-KQSYIQRNFSPDIIFRDVNELIADEAVTAFGSLRKVP 261 Query: 66 D-HDVLLAGFPCQPFS 80 D+L+ GF C FS Sbjct: 262 STLDLLVVGFSCVDFS 277 >gi|299771250|ref|YP_003733276.1| putative C-5 cytosine-specific DNA methylase [Acinetobacter sp. DR1] gi|298701338|gb|ADI91903.1| putative C-5 cytosine-specific DNA methylase [Acinetobacter sp. DR1] Length = 553 Score = 44.0 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 4/64 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 I D F G GG LE N + P ++ ++AN P+ + D+ + Sbjct: 24 IVDFFAGGGGASTGLEMGLNRPVHVAVNHN---PKAISMHEANHPHAKHYVQDVFVVDPV 80 Query: 63 DIPD 66 +I D Sbjct: 81 EICD 84 >gi|240275730|gb|EER39243.1| DNA repair protein RAD8 [Ajellomyces capsulatus H143] Length = 1838 Score = 44.0 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 14/76 (18%) Query: 18 LEQTFNHR-NVECFFSSEINPYSVKTY-QANFPNTLIFGDIAKIKTQD----------IP 65 ++ F + N+ FS+EI+P+ ++Y Q NF +IF D+ ++ + +P Sbjct: 142 FKKIFGQKFNMRHLFSAEIDPF-KQSYIQRNFSPDIIFRDVNELIADEAVTAFGSLRKVP 200 Query: 66 D-HDVLLAGFPCQPFS 80 D+L+ GF C FS Sbjct: 201 STLDLLVVGFSCVDFS 216 >gi|149633079|ref|XP_001509081.1| PREDICTED: similar to DNA methyltransferase 3A [Ornithorhynchus anatinus] Length = 815 Score = 44.0 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 537 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRN 592 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 593 VTQKHIQEWGPFDLVIGGSPCNDLSI 618 >gi|240141810|ref|YP_002966318.1| hypothetical protein MexAM1_META2p0039 [Methylobacterium extorquens AM1] gi|240011752|gb|ACS42977.1| Hypothetical protein MexAM1_META2p0039 [Methylobacterium extorquens AM1] Length = 250 Score = 43.6 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 28/82 (34%) Query: 4 ITDLFCGIGGIRLDLEQTFNH--RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + LF GIG + E+ R + + GD+ Sbjct: 8 VLSLFPGIGLLDQAFEEAGFCMVRGPDLLWG---------------------GDVRSFHP 46 Query: 62 QDIP--DHDVLLAGFPCQPFSQ 81 P D ++ G PCQ FS+ Sbjct: 47 ---PCGRFDGIVGGPPCQAFSR 65 >gi|6110464|gb|AAF03835.1|AF185647_1 DNA (5-cytosine) methyltransferase homolog [Drosophila melanogaster] Length = 345 Score = 43.6 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDIPD--HDVLLAGF 74 E + + + ++N + Y N+ + L+ +I + +++ ++LL Sbjct: 19 FEDA--QLDGQIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQANMLLMSP 76 Query: 75 PCQPFSQAG 83 PCQP ++ G Sbjct: 77 PCQPHTRQG 85 >gi|17137742|ref|NP_477475.1| methyltransferase 2, isoform A [Drosophila melanogaster] gi|7297918|gb|AAF53163.1| methyltransferase 2, isoform A [Drosophila melanogaster] Length = 345 Score = 43.6 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDIPD--HDVLLAGF 74 E + + + ++N + Y N+ + L+ +I + +++ ++LL Sbjct: 19 FEDA--QLDGQIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQANMLLMSP 76 Query: 75 PCQPFSQAG 83 PCQP ++ G Sbjct: 77 PCQPHTRQG 85 >gi|312214270|emb|CBX94263.1| hypothetical protein [Leptosphaeria maculans] Length = 1340 Score = 43.6 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 17/93 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDI-- 56 LK +F G G + +E+ + + +P+++ T +AN N L G + Sbjct: 643 LKGLSIFSGGGSLDRGIEEGGGVEFHT---AVDFSPHAIHTQRANARNPKICLYCGSVDD 699 Query: 57 --------AKIK-TQDIPDHDVLLAGFPCQPFS 80 I + L AG PC FS Sbjct: 700 YLKAALKGTNRDLIAGIGKVEFLCAGSPCPGFS 732 >gi|126322017|ref|XP_001372768.1| PREDICTED: similar to epithelial calcium channel [Monodelphis domestica] Length = 442 Score = 43.6 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 10/68 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H N + E +P++ + N + GD Sbjct: 229 LVDLYAGIGYFTLPF---LIHANAAFVHACEWDPHAAAALKKNLELNGVSDRCSIHLGDN 285 Query: 57 AKIKTQDI 64 K+K + I Sbjct: 286 RKLKLRSI 293 >gi|308803538|ref|XP_003079082.1| Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily (ISS) [Ostreococcus tauri] gi|116057536|emb|CAL51963.1| Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily (ISS) [Ostreococcus tauri] Length = 2061 Score = 43.6 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 11/62 (17%) Query: 30 FFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD----------IP-DHDVLLAGFPCQP 78 FS EI P+ + NF ++F DI ++ + +P D D+L+AG C Sbjct: 59 VFSCEIEPFKQAYIERNFAPPILFRDIRELGGDEATTAYGAKVRVPHDVDMLVAGTSCVD 118 Query: 79 FS 80 +S Sbjct: 119 YS 120 >gi|172088105|ref|NP_001003963.2| DNA (cytosine-5)-methyltransferase 3B isoform 4 [Mus musculus] gi|21655121|gb|AAL85481.1| DNA cytosine methyltransferase 3b6 [Mus musculus] gi|123234594|emb|CAM27221.1| DNA methyltransferase 3B [Mus musculus] gi|148674087|gb|EDL06034.1| mCG10465, isoform CRA_c [Mus musculus] gi|148674092|gb|EDL06039.1| mCG10465, isoform CRA_c [Mus musculus] Length = 796 Score = 43.6 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60 +++ LF GI L L++ VE + +SE+ S+ + D+ KI Sbjct: 581 IRVLSLFDGIATGYLVLKELGIK--VEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 638 Query: 61 TQDIPD---HDVLLAGFPCQPFS 80 ++I + D+++ G PC S Sbjct: 639 KKNIEEWGPFDLVIGGSPCNDLS 661 >gi|172088101|ref|NP_001003960.2| DNA (cytosine-5)-methyltransferase 3B isoform 2 [Mus musculus] gi|6449472|gb|AAC40179.2| DNA cytosine-5 methyltransferase 3B2 [Mus musculus] gi|123234598|emb|CAM27225.1| DNA methyltransferase 3B [Mus musculus] gi|148674090|gb|EDL06037.1| mCG10465, isoform CRA_d [Mus musculus] gi|148674091|gb|EDL06038.1| mCG10465, isoform CRA_d [Mus musculus] Length = 839 Score = 43.6 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60 +++ LF GI L L++ VE + +SE+ S+ + D+ KI Sbjct: 561 IRVLSLFDGIATGYLVLKELGIK--VEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 618 Query: 61 TQDIPD---HDVLLAGFPCQPFS 80 ++I + D+++ G PC S Sbjct: 619 KKNIEEWGPFDLVIGGSPCNDLS 641 >gi|172088103|ref|NP_034198.3| DNA (cytosine-5)-methyltransferase 3B isoform 3 [Mus musculus] gi|6449474|gb|AAC40180.2| DNA cytosine-5 methyltransferase 3B3 [Mus musculus] gi|123234596|emb|CAM27223.1| DNA methyltransferase 3B [Mus musculus] gi|148674085|gb|EDL06032.1| mCG10465, isoform CRA_a [Mus musculus] gi|148674088|gb|EDL06035.1| mCG10465, isoform CRA_a [Mus musculus] Length = 776 Score = 43.6 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60 +++ LF GI L L++ VE + +SE+ S+ + D+ KI Sbjct: 561 IRVLSLFDGIATGYLVLKELGIK--VEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 618 Query: 61 TQDIPD---HDVLLAGFPCQPFS 80 ++I + D+++ G PC S Sbjct: 619 KKNIEEWGPFDLVIGGSPCNDLS 641 >gi|8347126|gb|AAF74518.1|AF151972_1 DNA cytosine-specific methyltransferase isoform 4 [Mus musculus] gi|8347135|gb|AAF74521.1|AF151975_1 DNA cytosine-specific methyltransferase isoform 7 [Mus musculus] Length = 796 Score = 43.6 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60 +++ LF GI L L++ VE + +SE+ S+ + D+ KI Sbjct: 581 IRVLSLFDGIATGYLVLKELGIK--VEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 638 Query: 61 TQDIPD---HDVLLAGFPCQPFS 80 ++I + D+++ G PC S Sbjct: 639 KKNIEEWGPFDLVIGGSPCNDLS 661 >gi|8347120|gb|AAF74516.1|AF151970_1 DNA cytosine-specific methyltransferase isoform 2 [Mus musculus] gi|8347131|gb|AAF74520.1|AF151974_1 DNA cytosine-specific methyltransferase isoform 6 [Mus musculus] Length = 839 Score = 43.6 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60 +++ LF GI L L++ VE + +SE+ S+ + D+ KI Sbjct: 561 IRVLSLFDGIATGYLVLKELGIK--VEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 618 Query: 61 TQDIPD---HDVLLAGFPCQPFS 80 ++I + D+++ G PC S Sbjct: 619 KKNIEEWGPFDLVIGGSPCNDLS 641 >gi|8347118|gb|AAF74515.1|AF151969_1 DNA cytosine-specific methyltransferase isoform 1 [Mus musculus] gi|8347128|gb|AAF74519.1|AF151973_1 DNA cytosine-specific methyltransferase isoform 5 [Mus musculus] Length = 859 Score = 43.6 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60 +++ LF GI L L++ VE + +SE+ S+ + D+ KI Sbjct: 581 IRVLSLFDGIATGYLVLKELGIK--VEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 638 Query: 61 TQDIPD---HDVLLAGFPCQPFS 80 ++I + D+++ G PC S Sbjct: 639 KKNIEEWGPFDLVIGGSPCNDLS 661 >gi|8347123|gb|AAF74517.1|AF151971_1 DNA cytosine-specific methyltransferase isoform 3 [Mus musculus] gi|8347137|gb|AAF74522.1|AF151976_1 DNA cytosine-specific methyltransferase isoform 8 [Mus musculus] Length = 776 Score = 43.6 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60 +++ LF GI L L++ VE + +SE+ S+ + D+ KI Sbjct: 561 IRVLSLFDGIATGYLVLKELGIK--VEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 618 Query: 61 TQDIPD---HDVLLAGFPCQPFS 80 ++I + D+++ G PC S Sbjct: 619 KKNIEEWGPFDLVIGGSPCNDLS 641 >gi|172088108|ref|NP_001116469.1| DNA (cytosine-5)-methyltransferase 3B isoform 5 [Mus musculus] gi|76780249|gb|AAI05923.1| DNA methyltransferase 3B [Mus musculus] gi|111493961|gb|AAI05678.1| DNA methyltransferase 3B [Mus musculus] gi|123234595|emb|CAM27222.1| DNA methyltransferase 3B [Mus musculus] Length = 860 Score = 43.6 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60 +++ LF GI L L++ VE + +SE+ S+ + D+ KI Sbjct: 582 IRVLSLFDGIATGYLVLKELGIK--VEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 639 Query: 61 TQDIPD---HDVLLAGFPCQPFS 80 ++I + D+++ G PC S Sbjct: 640 KKNIEEWGPFDLVIGGSPCNDLS 662 >gi|172088099|ref|NP_001003961.2| DNA (cytosine-5)-methyltransferase 3B isoform 1 [Mus musculus] gi|17374904|sp|O88509|DNM3B_MOUSE RecName: Full=DNA (cytosine-5)-methyltransferase 3B; Short=Dnmt3b; AltName: Full=DNA methyltransferase MmuIIIB; Short=DNA MTase MmuIIIB; Short=M.MmuIIIB gi|6449470|gb|AAC40178.2| DNA cytosine-5 methyltransferase 3B1 [Mus musculus] gi|123234597|emb|CAM27224.1| DNA methyltransferase 3B [Mus musculus] gi|148674086|gb|EDL06033.1| mCG10465, isoform CRA_b [Mus musculus] gi|148674089|gb|EDL06036.1| mCG10465, isoform CRA_b [Mus musculus] Length = 859 Score = 43.6 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60 +++ LF GI L L++ VE + +SE+ S+ + D+ KI Sbjct: 581 IRVLSLFDGIATGYLVLKELGIK--VEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 638 Query: 61 TQDIPD---HDVLLAGFPCQPFS 80 ++I + D+++ G PC S Sbjct: 639 KKNIEEWGPFDLVIGGSPCNDLS 661 >gi|148674093|gb|EDL06040.1| mCG140755 [Mus musculus] Length = 637 Score = 43.6 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60 +++ LF GI L L++ VE + +SE+ S+ + DI I Sbjct: 422 IRVLSLFDGIATGYLVLKELGIK--VEKYIASEVCAESIAVGTVKHEGQIKYVDDIRNIT 479 Query: 61 TQDIPD---HDVLLAGFPCQPFS 80 + I + D+++ G PC S Sbjct: 480 KEHIDEWGPFDLVIGGSPCNDLS 502 >gi|4704471|gb|AAD28102.1| cytosine DNA methyltransferase [Rattus norvegicus] Length = 349 Score = 43.6 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 16/67 (23%) Query: 30 FFSSEINPYSVKTYQANFPNTLIF-------------GDIAKIKTQDIP---DHDVLLAG 73 ++ E+ + + ++ N P T +F G++ Q +P D ++L G Sbjct: 1 LWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGG 60 Query: 74 FPCQPFS 80 PCQ FS Sbjct: 61 PPCQGFS 67 >gi|254452152|ref|ZP_05065589.1| DNA-cytosine methyltransferase [Octadecabacter antarcticus 238] gi|198266558|gb|EDY90828.1| DNA-cytosine methyltransferase [Octadecabacter antarcticus 238] Length = 488 Score = 43.6 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 41/132 (31%), Gaps = 53/132 (40%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKT------YQANFPN----- 49 I D+F G GG+ E ++E++ ++ KT Y+ FP+ Sbjct: 7 IVDIFAGPGGLGEGFSALGRDTVRPFFETAIAAEMDKHAHKTLTLRAFYRQ-FPHQKAPQ 65 Query: 50 ------------------------------TLIFG---DIAKIKTQ---DIPDHD--VLL 71 + G D A + + + D VLL Sbjct: 66 SYYDYIAGKRETPYTDDTLAQWNNASQKVLHVELGKSEDDALLDKKLEVSLAGRDDWVLL 125 Query: 72 AGFPCQPFSQAG 83 G PCQ +S G Sbjct: 126 GGPPCQAYSTIG 137 >gi|17231665|ref|NP_488213.1| cytosine-specific DNA methyltransferase [Nostoc sp. PCC 7120] gi|8453097|gb|AAF75232.1|AF220508_2 cytosine-specific DNA methyltransferase [Nostoc sp. PCC 7120] gi|17133308|dbj|BAB75872.1| cytosine-specific DNA methyltransferase [Nostoc sp. PCC 7120] Length = 385 Score = 43.6 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 31/105 (29%), Gaps = 29/105 (27%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA-----NFPNTL---IFGD 55 + F G G + L E + +EI + Y+ N P + GD Sbjct: 7 VFSFFAGSGFLDLGFE----TSGFNIVYVNEIFSPFMAAYRYLREILNLPLSEYGYYQGD 62 Query: 56 IAKIK--TQDIP---------------DHDVLLAGFPCQPFSQAG 83 A + + P + + G PC FS G Sbjct: 63 TADVSKLVEGFPGKYLLDWVQECRKSNNIVGFIGGPPCPDFSIGG 107 >gi|330818898|ref|YP_004351115.1| C-5 cytosine-specific DNA methylase [Burkholderia gladioli BSR3] gi|327374440|gb|AEA65792.1| C-5 cytosine-specific DNA methylase [Burkholderia gladioli BSR3] Length = 828 Score = 43.6 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFP-NTLIFGDIAK 58 I D F G GG LE F +I +P ++ + N P + ++ Sbjct: 26 IIDNFAGGGGTSTGLEAAFGRP-------VDIAINHDPQAIAMHALNHPRTKHLCENVWN 78 Query: 59 IKTQDI---PDHDVLLAGFPCQPFSQA 82 + ++ ++ C+ FS+A Sbjct: 79 VDPIEVTQNRPVALVWLSPDCKHFSKA 105 >gi|326935591|ref|XP_003213853.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like, partial [Meleagris gallopavo] Length = 698 Score = 43.6 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 420 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRN 475 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 476 VTQKHIQEWGPFDLVIGGSPCNDLSI 501 >gi|293418093|ref|ZP_06660714.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185] gi|291430224|gb|EFF03223.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185] Length = 363 Score = 43.6 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 28/99 (28%), Gaps = 25/99 (25%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------FGDIA 57 F G G + L E H F +E + + Y+ + I GDI Sbjct: 8 SFFSGSGFLDLGFE----HSGFNVGFVNEFHEAFLNAYKHSRIKMKIKEPYYGYHNGDIR 63 Query: 58 -------------KIKTQDIPDHDVLLAGFPCQPFSQAG 83 K+ + G PC FS G Sbjct: 64 DLISGDGCIELLHKVNEAKGESLVGFIGGPPCPDFSVGG 102 >gi|291614414|ref|YP_003524571.1| C-5 cytosine-specific DNA methylase [Sideroxydans lithotrophicus ES-1] gi|291584526|gb|ADE12184.1| C-5 cytosine-specific DNA methylase [Sideroxydans lithotrophicus ES-1] Length = 609 Score = 43.6 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIKTQ 62 I D F G GG E + +P +V +QAN P T + + + ++ + Sbjct: 15 IIDNFAGGGGASTGFELALGRH---VDVAINHDPEAVSMHQANHPQTRHYCESVWEVDPR 71 Query: 63 DI---PDHDVLLAGFPCQPFSQA 82 + L C+ FS+A Sbjct: 72 TVHPGRKIGALWLSPDCKHFSKA 94 >gi|71001130|ref|XP_755246.1| SNF2 family helicase [Aspergillus fumigatus Af293] gi|66852884|gb|EAL93208.1| SNF2 family helicase, putative [Aspergillus fumigatus Af293] gi|159129330|gb|EDP54444.1| SNF2 family helicase, putative [Aspergillus fumigatus A1163] Length = 2115 Score = 43.6 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 11/73 (15%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT----------QDIPDH- 67 E+ + FS+EI P+ + NF +F D+ ++K + IP + Sbjct: 104 ERFGKNFEFRHLFSAEIVPFKQAYIERNFHPRFLFRDVKQLKNRFAQTAYGSLEKIPKNP 163 Query: 68 DVLLAGFPCQPFS 80 D+++AGF C FS Sbjct: 164 DLVIAGFSCVDFS 176 >gi|254522834|ref|ZP_05134889.1| C-5 cytosine-specific DNA methylase [Stenotrophomonas sp. SKA14] gi|219720425|gb|EED38950.1| C-5 cytosine-specific DNA methylase [Stenotrophomonas sp. SKA14] Length = 651 Score = 43.2 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 10/90 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNT---LIFGD 55 ML + DLFCG GG+ + V+ + P +++T + N + D Sbjct: 1 ML-VADLFCGAGGLSNGTARAMRQLGLPVQMIGVNHW-PVAIETNRRNHKEHADRIHCAD 58 Query: 56 IAKIKTQDI-PD--HDVLLAGFPCQPFSQA 82 + I P+ D+L A C S+A Sbjct: 59 LESALPLTIVPEGRLDLLTAAPSCVFHSRA 88 >gi|154488616|ref|ZP_02029465.1| hypothetical protein BIFADO_01923 [Bifidobacterium adolescentis L2-32] gi|154082753|gb|EDN81798.1| hypothetical protein BIFADO_01923 [Bifidobacterium adolescentis L2-32] Length = 505 Score = 43.2 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 37/135 (27%), Gaps = 55/135 (40%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKTYQAN-------------- 46 + DLF G GG+ + + S E+ + T + Sbjct: 8 VIDLFAGPGGMSEGFSSLRDENDEPVFRSIMSIEMERTAHATLRLRAFARRLMDADGRLP 67 Query: 47 ---------------------FP------------NTLIFGDIAKIK--TQDIPDHD--- 68 P TL GD ++ + + +D Sbjct: 68 QDYIDYLGTPSSENLERLKDSHPEEWAAAEAEAIQGTLKEGDDEFVEMAKKRLQGYDGPL 127 Query: 69 VLLAGFPCQPFSQAG 83 VL+ G PCQ +S G Sbjct: 128 VLIGGPPCQAYSLVG 142 >gi|150400710|ref|YP_001324476.1| protein of unknown function Met10 [Methanococcus aeolicus Nankai-3] gi|150013413|gb|ABR55864.1| protein of unknown function Met10 [Methanococcus aeolicus Nankai-3] Length = 355 Score = 43.2 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 13/62 (20%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 + D+FCG+G + + ++ +INP +V+ + N I DI Sbjct: 220 VVDMFCGVGPFSIACKNAKK------IYAIDINPDAVELLKKNIKLNKLQHKIIPINNDI 273 Query: 57 AK 58 K Sbjct: 274 RK 275 >gi|256960248|ref|ZP_05564419.1| site-specific DNA methylase [Enterococcus faecalis Merz96] gi|257423072|ref|ZP_05600062.1| site-specific DNA methylase [Enterococcus faecalis X98] gi|256950744|gb|EEU67376.1| site-specific DNA methylase [Enterococcus faecalis Merz96] gi|257164896|gb|EEU94856.1| site-specific DNA methylase [Enterococcus faecalis X98] Length = 439 Score = 43.2 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 9/87 (10%) Query: 2 LK--ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAK 58 +K + D F G GG +E + +P ++ ++AN PNT + + + Sbjct: 1 MKEIVVDNFAGGGGASTGIEHAIGRS---VDVAINHDPDAIAMHEANHPNTKHYCESVWD 57 Query: 59 IKTQDI---PDHDVLLAGFPCQPFSQA 82 + +D+ + C+ FS+A Sbjct: 58 VHPRDVANGRPVALCWLSPDCKHFSKA 84 >gi|126465624|ref|YP_001040733.1| methyltransferase [Staphylothermus marinus F1] gi|126014447|gb|ABN69825.1| methyltransferase [Staphylothermus marinus F1] Length = 328 Score = 43.2 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 8/69 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDI--AK 58 KI DLF GIGG + H++ ++++NPY+ + N + G+I K Sbjct: 181 KIIDLFSGIGGFPI--HIASMHKSF--ILANDLNPYAFVSIIDNILLNRKKLRGNIAVTK 236 Query: 59 IKTQDIPDH 67 I ++ + Sbjct: 237 IDAKEFMNF 245 >gi|288917811|ref|ZP_06412172.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f] gi|288350739|gb|EFC84955.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f] Length = 389 Score = 43.2 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 3/29 (10%) Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D+ ++ DI D++ G PCQPFS +G Sbjct: 66 DVENLELDDI---DLVAGGPPCQPFSISG 91 >gi|115946840|ref|XP_001180639.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 326 Score = 43.2 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DL+ GIG L H + ++ E NP++VK + N Sbjct: 22 TVVDLYAGIGYFTLPY---LVHAKAKLLYACEWNPHAVKALRTN 62 >gi|229188078|ref|ZP_04315163.1| Cytosine-specific methyltransferase [Bacillus cereus BGSC 6E1] gi|228595388|gb|EEK53123.1| Cytosine-specific methyltransferase [Bacillus cereus BGSC 6E1] Length = 318 Score = 43.2 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 6/75 (8%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDH 67 F GIG R L + + E VK Y A + + D+ Sbjct: 2 FGGIGAPRKALVNLG--IDHKAIDYVEWQANRVKAYNALYDHLHKPQDVRGWNL----KP 55 Query: 68 DVLLAGFPCQPFSQA 82 D+L+ G PCQ S+A Sbjct: 56 DILVHGSPCQDNSRA 70 >gi|26346729|dbj|BAC37013.1| unnamed protein product [Mus musculus] Length = 618 Score = 43.2 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 35/84 (41%), Gaps = 6/84 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60 +++ LF GI L L+ + +SE+ S+ +++ GD+ + Sbjct: 411 IRVLSLFDGIATGLLVLKDLGIQVDHYI--ASEVCEDSITVGMVRHQGKIMYVGDVRSVT 468 Query: 61 TQDIPD---HDVLLAGFPCQPFSQ 81 + I + D+++ G PC S Sbjct: 469 QKHIQEWGPFDLVIGGSPCNDLSI 492 >gi|226227218|ref|YP_002761324.1| DNA methyltransferase [Gemmatimonas aurantiaca T-27] gi|226090409|dbj|BAH38854.1| DNA methyltransferase [Gemmatimonas aurantiaca T-27] Length = 447 Score = 43.2 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62 I D F G GG L +E + ++ +QAN P + + D+ ++ Sbjct: 8 IIDSFAGGGGASLGIELALGRSPDVAINH---DAEAIALHQANHPTSKHYREDVWQVDPL 64 Query: 63 DI---PDHDVLLAGFPCQPFSQA 82 + ++ C+ FS+A Sbjct: 65 EATGGRPVGLMWLSPDCKHFSKA 87 >gi|224613538|gb|ACN60348.1| DNA [Salmo salar] Length = 466 Score = 43.2 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 18/70 (25%) Query: 28 ECFFSSE-INPYSVKTYQANFPNTLIF-------------GDIAKIKTQDIP---DHDVL 70 E ++ E +P + ++ N P T +F G+ Q +P D ++L Sbjct: 1 ETLWAIEMWDPAAQA-FRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQRLPQKGDVEML 59 Query: 71 LAGFPCQPFS 80 G PCQ FS Sbjct: 60 CGGPPCQGFS 69 >gi|115911664|ref|XP_798254.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 334 Score = 43.2 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DL+ GIG L H + ++ E NP++VK + N Sbjct: 30 TVVDLYAGIGYFTLPY---LVHAKAKLLYACEWNPHAVKALRTN 70 >gi|327287014|ref|XP_003228224.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Anolis carolinensis] gi|289657686|gb|ADD14584.1| DNA methyltransferase 3A [Anolis carolinensis] Length = 689 Score = 43.2 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 411 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRN 466 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 467 VTQKHIQEWGPFDLVIGGSPCNDLSI 492 >gi|330721358|gb|EGG99430.1| Modification methylase [gamma proteobacterium IMCC2047] Length = 318 Score = 43.2 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 8/51 (15%) Query: 39 SVKTYQANFPNTLIFGDIAKIKTQDIP------DHDVLLAGFPCQPFSQAG 83 S +TY + P ++ DI + + I D + ++ G PCQ FS G Sbjct: 4 SKQTYLSKHP--VLCEDINNLSYKSIKKEIGTKDVNFIIGGPPCQAFSVFG 52 >gi|294634575|ref|ZP_06713110.1| phage methyltransferase [Edwardsiella tarda ATCC 23685] gi|291092089|gb|EFE24650.1| phage methyltransferase [Edwardsiella tarda ATCC 23685] Length = 336 Score = 43.2 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 26/84 (30%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIP------------------- 65 + +EI+PY+ K + P + I + D+ Sbjct: 6 YYNEIDPYAAKWLRNLIAEGHIAPGEVDERSIEDVTPDDLRGFTQCHFFAGIGVWSLALR 65 Query: 66 ------DHDVLLAGFPCQPFSQAG 83 D V PCQPFS AG Sbjct: 66 RAGWPDDLPVWTGSCPCQPFSAAG 89 >gi|240145560|ref|ZP_04744161.1| putative C-5 cytosine-specific DNA methylase [Roseburia intestinalis L1-82] gi|257202377|gb|EEV00662.1| putative C-5 cytosine-specific DNA methylase [Roseburia intestinalis L1-82] Length = 586 Score = 43.2 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG-DIAK 58 I D F G GG +E +S +I +P ++K ++AN PNT + ++ Sbjct: 26 IVDNFAGGGGASTGIEMATG-------YSVDIAINHDPEAIKMHKANHPNTKHYCENVWA 78 Query: 59 IKT-QDIPDHDVLLA--GFPCQPFSQA 82 + + H V LA C+ FS+A Sbjct: 79 VDPVKACNGHPVALAWFSPDCKHFSKA 105 >gi|282535271|gb|ADA82477.1| putative C-specific methylase [Escherichia phage K1ind3] gi|282547372|gb|ADA82428.1| putative C-specific methylase [Escherichia phage K1ind2] Length = 309 Score = 43.2 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQANFP-NTLIFG-----DIAKIKTQDI-------------------- 64 + +E + + + + FG I ++K +D+ Sbjct: 3 YYNEWDKGAAAWLRELIKQGHIPFGVVDERSITEVKPEDLDGFTQCHFFAGIGGWPLALR 62 Query: 65 -----PDHDVLLAGFPCQPFSQAG 83 D + PCQPFS AG Sbjct: 63 LAGVPEDAPLWTGSPPCQPFSAAG 86 >gi|320009148|gb|ADW03998.1| hypothetical protein Sfla_2569 [Streptomyces flavogriseus ATCC 33331] Length = 221 Score = 43.2 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 16/81 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-----I 56 L++ DL CG GG+ + ++ + + N+P T D Sbjct: 14 LRVLDLCCGAGGLSMGYYLAGYDVTG-------VDLHPMP----NYPFTFRQADALDYLA 62 Query: 57 AKIKTQDIPDHDVLLAGFPCQ 77 + + +I +DV+ A +PCQ Sbjct: 63 TIVASGEIERYDVVHASWPCQ 83 >gi|281357227|ref|ZP_06243716.1| DNA-cytosine methyltransferase [Victivallis vadensis ATCC BAA-548] gi|281316258|gb|EFB00283.1| DNA-cytosine methyltransferase [Victivallis vadensis ATCC BAA-548] Length = 656 Score = 43.2 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%) Query: 48 PNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 GD KI D ++L+ G PCQ +S AG Sbjct: 79 GTVPNLGDFTKITKDDYEGKIELLVGGTPCQSYSLAG 115 >gi|119480763|ref|XP_001260410.1| C-5 cytosine-specific DNA methylase, putative [Neosartorya fischeri NRRL 181] gi|119408564|gb|EAW18513.1| C-5 cytosine-specific DNA methylase, putative [Neosartorya fischeri NRRL 181] Length = 2130 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 11/73 (15%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT----------QDIPDH- 67 E + FS+EI P+ + NF +F D+ ++K + IP + Sbjct: 103 ESFGKNFEFRHLFSAEIVPFKQAYIERNFHPRFLFRDVKQLKDRFAQTAYGSLEKIPKNP 162 Query: 68 DVLLAGFPCQPFS 80 D+++AGF C FS Sbjct: 163 DLVIAGFSCVDFS 175 >gi|121698875|ref|XP_001267835.1| C-5 cytosine-specific DNA methylase, putative [Aspergillus clavatus NRRL 1] gi|119395977|gb|EAW06409.1| C-5 cytosine-specific DNA methylase, putative [Aspergillus clavatus NRRL 1] Length = 2150 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 11/69 (15%) Query: 23 NHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT----------QDIPD-HDVLL 71 + + FS+EI P+ + NF +F D+A++K + IP D+L+ Sbjct: 142 KNFDFRHLFSAEIVPFKQAYIERNFHPRFLFRDVAQLKDRVAQTAYGSLEKIPKNADLLI 201 Query: 72 AGFPCQPFS 80 AGF C FS Sbjct: 202 AGFSCVDFS 210 >gi|299744877|ref|XP_001831325.2| DNA repair protein rad8 [Coprinopsis cinerea okayama7#130] gi|298406330|gb|EAU90488.2| DNA repair protein rad8 [Coprinopsis cinerea okayama7#130] Length = 2184 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 11/73 (15%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD--------IP---DH 67 +Q VE FS EI P+ + NF ++F D+ ++ + +P D Sbjct: 96 DQHGIKLEVEHVFSCEIEPFKQAYIERNFQPPILFRDVCELGDDEAHTAYGALVPVPGDV 155 Query: 68 DVLLAGFPCQPFS 80 D+L+AG C +S Sbjct: 156 DMLVAGTSCVDYS 168 >gi|32350983|gb|AAP75902.1| DNA methyltransferase 3a isoform 4 [Bos taurus] Length = 821 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 543 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 598 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 599 VTQKHIQEWGPFDLVIGGSPCNDLSI 624 >gi|330417960|ref|NP_001193431.1| DNA (cytosine-5)-methyltransferase 3A [Bos taurus] Length = 909 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 631 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 686 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 687 VTQKHIQEWGPFDLVIGGSPCNDLSI 712 >gi|301756030|ref|XP_002913875.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 3A-like [Ailuropoda melanoleuca] Length = 957 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 679 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 734 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 735 VTQKHIQEWGPFDLVIGGSPCNDLSI 760 >gi|291387188|ref|XP_002710120.1| PREDICTED: DNA cytosine methyltransferase 3 alpha [Oryctolagus cuniculus] Length = 940 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 662 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 717 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 718 VTQKHIQEWGPFDLVIGGSPCNDLSI 743 >gi|194035597|ref|XP_001927670.1| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog [Sus scrofa] Length = 439 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 10/70 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 229 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLELNGVADRCQIHFGDN 285 Query: 57 AKIKTQDIPD 66 K++ +I D Sbjct: 286 RKLRLSNIAD 295 >gi|167774091|gb|ABZ92480.1| DNA (cytosine-5-)-methyltransferase 3 alpha [synthetic construct] Length = 912 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 634 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 689 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 690 VTQKHIQEWGPFDLVIGGSPCNDLSI 715 >gi|149727718|ref|XP_001503030.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 3 alpha [Equus caballus] Length = 909 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 631 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 686 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 687 VTQKHIQEWGPFDLVIGGSPCNDLSI 712 >gi|119621133|gb|EAX00728.1| DNA (cytosine-5-)-methyltransferase 3 alpha, isoform CRA_b [Homo sapiens] Length = 914 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 636 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 691 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 692 VTQKHIQEWGPFDLVIGGSPCNDLSI 717 >gi|114576486|ref|XP_001148246.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha isoform 1 [Pan troglodytes] gi|114576488|ref|XP_001148658.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha isoform 4 [Pan troglodytes] Length = 909 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 631 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 686 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 687 VTQKHIQEWGPFDLVIGGSPCNDLSI 712 >gi|32350981|gb|AAP75901.1| DNA methyltransferase 3a [Bos taurus] Length = 888 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 610 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 665 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 666 VTQKHIQEWGPFDLVIGGSPCNDLSI 691 >gi|13938621|gb|AAH07466.1| DNA methyltransferase 3A [Mus musculus] Length = 908 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 630 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 685 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 686 VTQKHIQEWGPFDLVIGGSPCNDLSI 711 >gi|73980626|ref|XP_540110.2| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha isoform a [Canis familiaris] Length = 969 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 691 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 746 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 747 VTQKHIQEWGPFDLVIGGSPCNDLSI 772 >gi|12751473|ref|NP_072046.2| DNA (cytosine-5)-methyltransferase 3A isoform a [Homo sapiens] gi|28559069|ref|NP_783328.1| DNA (cytosine-5)-methyltransferase 3A isoform a [Homo sapiens] gi|166215081|sp|Q9Y6K1|DNM3A_HUMAN RecName: Full=DNA (cytosine-5)-methyltransferase 3A; Short=Dnmt3a; AltName: Full=DNA methyltransferase HsaIIIA; Short=DNA MTase HsaIIIA; Short=M.HsaIIIA gi|12746532|gb|AAD33084.2|AF067972_1 DNA cytosine methyltransferase 3 alpha [Homo sapiens] gi|27694444|gb|AAH43617.1| DNA (cytosine-5-)-methyltransferase 3 alpha [Homo sapiens] gi|62822212|gb|AAY14761.1| unknown [Homo sapiens] gi|119621132|gb|EAX00727.1| DNA (cytosine-5-)-methyltransferase 3 alpha, isoform CRA_a [Homo sapiens] gi|261859196|dbj|BAI46120.1| DNA (cytosine-5-)-methyltransferase 3 alpha [synthetic construct] Length = 912 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 634 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 689 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 690 VTQKHIQEWGPFDLVIGGSPCNDLSI 715 >gi|51556225|ref|NP_001003958.1| DNA (cytosine-5)-methyltransferase 3A isoform 1 [Rattus norvegicus] gi|123778851|sp|Q1LZ53|DNM3A_RAT RecName: Full=DNA (cytosine-5)-methyltransferase 3A; Short=Dnmt3a gi|50539389|tpe|CAE52317.1| TPA: putative DNA (cytosine-5) methyltransferase 3a [Rattus norvegicus] Length = 908 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 630 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 685 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 686 VTQKHIQEWGPFDLVIGGSPCNDLSI 711 >gi|18033253|gb|AAL57039.1|AF331856_1 DNA cytosine methyltransferase 3 alpha [Homo sapiens] Length = 909 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 631 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 686 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 687 VTQKHIQEWGPFDLVIGGSPCNDLSI 712 >gi|6681209|ref|NP_031898.1| DNA (cytosine-5)-methyltransferase 3A isoform 1 [Mus musculus] gi|17374900|sp|O88508|DNM3A_MOUSE RecName: Full=DNA (cytosine-5)-methyltransferase 3A; Short=Dnmt3a; AltName: Full=DNA methyltransferase MmuIIIA; Short=DNA MTase MmuIIIA; Short=M.MmuIIIA gi|6449468|gb|AAC40177.2| DNA cytosine-5 methyltransferase 3A [Mus musculus] gi|26354967|dbj|BAC41110.1| unnamed protein product [Mus musculus] gi|74181067|dbj|BAE27806.1| unnamed protein product [Mus musculus] gi|74188565|dbj|BAE28033.1| unnamed protein product [Mus musculus] gi|74188590|dbj|BAE28043.1| unnamed protein product [Mus musculus] gi|74188648|dbj|BAE28067.1| unnamed protein product [Mus musculus] gi|148669440|gb|EDL01387.1| DNA methyltransferase 3A, isoform CRA_a [Mus musculus] Length = 908 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 630 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 685 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 686 VTQKHIQEWGPFDLVIGGSPCNDLSI 711 >gi|224112050|ref|XP_002316067.1| DNA methyltransferase [Populus trichocarpa] gi|222865107|gb|EEF02238.1| DNA methyltransferase [Populus trichocarpa] Length = 609 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 22/95 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH-RNVECFFSSEINPYSVKTYQANFPNTLIFG------ 54 + + LF GIGG + L + H + V +SE N + + + ++ G Sbjct: 486 ITVLSLFSGIGGAEITLHRLGIHLKGVVSVETSETN---RRVLKRWWYSSGQTGRLEQIE 542 Query: 55 DIAKIKTQDIPD-------HDVLLAGFPCQ-PFSQ 81 DI K+ + + D ++ CQ F++ Sbjct: 543 DIRKLTSSTVERLVENFVCFDFVI----CQNSFTR 573 >gi|38707957|ref|NP_945098.1| gp67 [Burkholderia phage phi1026b] gi|38505449|gb|AAR23218.1| gp67 [Burkholderia phage phi1026b] Length = 433 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 28/99 (28%), Gaps = 32/99 (32%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNV--ECFFSSE-----------------INPYSVKTYQA 45 +L G+G + + H + E I+ Sbjct: 9 IELCAGVGMLGEGVRTALEHFGIGHRTVCYVEREATAAAQLAALMEAEAIDQ-------- 60 Query: 46 NFPNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 I+ D+ D ++AGFPCQ S AG Sbjct: 61 ----APIWSDLLTFDGAAWRGRVDCVIAGFPCQDLSVAG 95 >gi|303279905|ref|XP_003059245.1| TWY3 methyltransferase [Micromonas pusilla CCMP1545] gi|226459081|gb|EEH56377.1| TWY3 methyltransferase [Micromonas pusilla CCMP1545] Length = 1079 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 3/44 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DL+ GIG L Q H V ++ E NP SV + N Sbjct: 489 TVVDLYAGIGYYTL---QLLKHAGVSKVYACEWNPNSVAALKKN 529 >gi|107024103|ref|YP_622430.1| DNA (cytosine-5-)-methyltransferase [Burkholderia cenocepacia AU 1054] gi|116688030|ref|YP_833653.1| DNA (cytosine-5-)-methyltransferase [Burkholderia cenocepacia HI2424] gi|105894292|gb|ABF77457.1| DNA (cytosine-5-)-methyltransferase [Burkholderia cenocepacia AU 1054] gi|116646119|gb|ABK06760.1| DNA (cytosine-5-)-methyltransferase [Burkholderia cenocepacia HI2424] Length = 38 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 20 QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GD 55 F EC F+SE N +S KTY N+ + F GD Sbjct: 1 MGFEAHGGECVFTSEWNDFSKKTYLENYGDRHPFVGD 37 >gi|302415627|ref|XP_003005645.1| DNA methyltransferase Dim-2 [Verticillium albo-atrum VaMs.102] gi|261355061|gb|EEY17489.1| DNA methyltransferase Dim-2 [Verticillium albo-atrum VaMs.102] Length = 1373 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 7/60 (11%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAKIKT 61 DLFCG G LE++ +E ++++IN +V TY AN + + G I + T Sbjct: 790 DLFCGGGNFGRGLEESGA---IEMRWANDINMRAVHTYMANLDDPSRVSPFAGSIDDLTT 846 >gi|62087246|dbj|BAD92070.1| DNA cytosine methyltransferase 3 alpha isoform a variant [Homo sapiens] Length = 811 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 664 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 719 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 720 VTQKHIQEWGPFDLVIGGSPCNDLSI 745 >gi|224823639|ref|ZP_03696748.1| C-5 cytosine-specific DNA methylase [Lutiella nitroferrum 2002] gi|224604094|gb|EEG10268.1| C-5 cytosine-specific DNA methylase [Lutiella nitroferrum 2002] Length = 610 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIF-GDIAK 58 I DLF G GG +E +I + ++ ++AN P T + D+ + Sbjct: 15 IVDLFAGGGGKSTGIEHALGR-------HVDIAINHDSDAISMHEANHPQTEHYCADVFE 67 Query: 59 IKTQDI---PDHDVLLAGFPCQPFSQA 82 + + L C FSQA Sbjct: 68 VCPRTATRGRPVGHLHGSPDCTHFSQA 94 >gi|153867953|ref|ZP_01998119.1| hypothetical protein BGS_0003 [Beggiatoa sp. SS] gi|152144728|gb|EDN71882.1| hypothetical protein BGS_0003 [Beggiatoa sp. SS] Length = 52 Score = 42.8 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 15/20 (75%) Query: 1 MLKITDLFCGIGGIRLDLEQ 20 ++KI DLF GIGG+ L ++ Sbjct: 3 IMKIIDLFAGIGGLSLGFQK 22 >gi|332243317|ref|XP_003270826.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Nomascus leucogenys] Length = 891 Score = 42.8 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 613 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 668 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 669 VTQKHIQEWGPFDLVIGGSPCNDLSI 694 >gi|240851538|ref|NP_001155876.1| DNA (cytosine-5)-methyltransferase 3B [Sus scrofa] gi|226222434|gb|ACO38648.1| DNA methyltransferase 3B [Sus scrofa] Length = 852 Score = 42.8 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ L GI L L++ +SE+ S+ ++ N +I Sbjct: 574 IRVLSLLDGIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 631 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 632 KKNIEEWGPFDLVIGGSPCNDLS 654 >gi|327348877|gb|EGE77734.1| SNF2 family helicase [Ajellomyces dermatitidis ATCC 18188] Length = 2158 Score = 42.8 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 21/99 (21%) Query: 2 LKITDLFCGIGGIRLDLEQT--------FNHRNVECFFSSEINPYSVKTY-QANFPNTLI 52 L++ + G L LE ++ FS+EI+P+ ++Y Q NF +I Sbjct: 138 LRVATMCSGTEAPLLALEMAIASFKKIFGKTFSMHHLFSAEIDPF-KQSYIQRNFSPDII 196 Query: 53 FGDIAKIKTQD----------IP-DHDVLLAGFPCQPFS 80 F D+ ++ + +P + D+L+ GF C FS Sbjct: 197 FRDVNELIADEATTAFGSLRKVPSNLDLLVVGFSCVDFS 235 >gi|239610686|gb|EEQ87673.1| SNF2 family helicase [Ajellomyces dermatitidis ER-3] Length = 1945 Score = 42.8 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 21/99 (21%) Query: 2 LKITDLFCGIGGIRLDLEQT--------FNHRNVECFFSSEINPYSVKTY-QANFPNTLI 52 L++ + G L LE ++ FS+EI+P+ ++Y Q NF +I Sbjct: 138 LRVATMCSGTEAPLLALEMAIASFKKIFGKTFSMHHLFSAEIDPF-KQSYIQRNFSPDII 196 Query: 53 FGDIAKIKTQD----------IP-DHDVLLAGFPCQPFS 80 F D+ ++ + +P + D+L+ GF C FS Sbjct: 197 FRDVNELIADEATTAFGSLRKVPSNLDLLVVGFSCVDFS 235 >gi|302531913|ref|ZP_07284255.1| phage protein [Streptomyces sp. AA4] gi|302440808|gb|EFL12624.1| phage protein [Streptomyces sp. AA4] Length = 516 Score = 42.8 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 24 HRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 H ++ +++ +++T+ ANFP+T+ +I+++ + D+L A C S A Sbjct: 2 HPWLKTVYAANHWEQAIETHAANFPDTIHTIVNISQVNPRFFATTDLLWASPECTNHSGA 61 >gi|221507944|gb|EEE33531.1| conserved hypothetical protein [Toxoplasma gondii VEG] Length = 754 Score = 42.8 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA 45 + DLFCGIG L ++ ++ + N +++ ++A Sbjct: 488 TVVDLFCGIGYFSLAALTCAGADKLKHLYACDWNQDALQFFEA 530 >gi|221483474|gb|EEE21793.1| conserved hypothetical protein [Toxoplasma gondii GT1] Length = 754 Score = 42.8 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA 45 + DLFCGIG L ++ ++ + N +++ ++A Sbjct: 488 TVVDLFCGIGYFSLAALTCAGADKLKHLYACDWNQDALQFFEA 530 >gi|237839183|ref|XP_002368889.1| hypothetical protein TGME49_034490 [Toxoplasma gondii ME49] gi|211966553|gb|EEB01749.1| hypothetical protein TGME49_034490 [Toxoplasma gondii ME49] Length = 754 Score = 42.8 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA 45 + DLFCGIG L ++ ++ + N +++ ++A Sbjct: 488 TVVDLFCGIGYFSLAALTCAGADKLKHLYACDWNQDALQFFEA 530 >gi|221126212|ref|XP_002159378.1| PREDICTED: similar to tRNA wybutosine-synthesizing protein 2 homolog, partial [Hydra magnipapillata] Length = 490 Score = 42.8 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 5/44 (11%) Query: 4 ITDLFCGIGGIRLD-LEQTFNHRNVECFFSSEINPYSVKTYQAN 46 I DLF GIG L L + H ++ E NP ++ + N Sbjct: 304 IVDLFAGIGYFTLPYLVKARAH----TVYACEWNPNAIIALKRN 343 >gi|282533168|gb|ADA82277.1| putative C-specific methylase [Escherichia phage K1G] gi|282534219|gb|ADA82327.1| putative C-specific methylase [Escherichia phage K1H] Length = 274 Score = 42.8 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQANFP-NTLIFG-----DIAKIKTQDI-------------------- 64 + +E + + + + FG I ++K +D+ Sbjct: 3 YYNEWDKGAAAWLRELIKQGHIPFGVVDERSITEVKPEDLDGFTQCHFFAGIGGWPLALR 62 Query: 65 -----PDHDVLLAGFPCQPFSQAG 83 D + PCQPFS AG Sbjct: 63 LAGVPEDAPLWTGSPPCQPFSAAG 86 >gi|194389584|dbj|BAG61753.1| unnamed protein product [Homo sapiens] Length = 728 Score = 42.8 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 6/83 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57 +++ LF I L L++ +SE+ S+ ++ N +I Sbjct: 513 IRVLSLFDDIATGYLVLKELGIKVGKYV--ASEVCEESIAVGTVKHEGNIKYVNDVRNIT 570 Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80 K ++ D+++ G PC S Sbjct: 571 KKNIEEWGPFDLVIGGSPCNDLS 593 >gi|47212796|emb|CAF96171.1| unnamed protein product [Tetraodon nigroviridis] Length = 2195 Score = 42.8 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 11/71 (15%) Query: 15 RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDI---PDHDVL 70 L + VE + +SE+ S+ N + GD+ I + + D+L Sbjct: 1868 DLGFK-------VETYIASEVCEDSIAVAAVNHEGKITQVGDVRFINQEQLHRWGPFDLL 1920 Query: 71 LAGFPCQPFSQ 81 + G PC S Sbjct: 1921 IGGSPCNDLSI 1931 Score = 38.6 bits (90), Expect = 0.30, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 12/32 (37%) Query: 50 TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81 DI K + D+++ G PC S Sbjct: 529 VHDVRDITKKNIMEWGPFDLVIGGSPCNDLSI 560 >gi|282547320|gb|ADA82377.1| putative C-specific methylase [Escherichia phage K1ind1] Length = 274 Score = 42.8 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQANFP-NTLIFG-----DIAKIKTQDI-------------------- 64 + +E + + + + FG I ++K +D+ Sbjct: 3 YYNEWDKGAAAWLRELIKQGHIPFGVVDERSITEVKPEDLDGFTQCHFFAGIGGWPLALR 62 Query: 65 -----PDHDVLLAGFPCQPFSQAG 83 D + PCQPFS AG Sbjct: 63 LAGVPEDAPLWTGSPPCQPFSAAG 86 >gi|256393200|ref|YP_003114764.1| C-5 cytosine-specific DNA methylase [Catenulispora acidiphila DSM 44928] gi|256359426|gb|ACU72923.1| C-5 cytosine-specific DNA methylase [Catenulispora acidiphila DSM 44928] Length = 438 Score = 42.8 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 15/84 (17%) Query: 7 LFCGIGGIRLDLEQTF----NHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAKI 59 L G GG L L + N E +++ AN+ DIA + Sbjct: 34 LLAGGGGDTLGLWEAGFLPLYGGNHEAV--------CIESLIANWAGLGTEHELADIAHL 85 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 D+P DVL A C S AG Sbjct: 86 AMSDLPSSDVLWASVICTEVSPAG 109 >gi|254191931|ref|ZP_04898431.1| DNA cytosine methyltransferase [Burkholderia pseudomallei Pasteur 52237] gi|157987753|gb|EDO95518.1| DNA cytosine methyltransferase [Burkholderia pseudomallei Pasteur 52237] Length = 661 Score = 42.8 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFGD-IAK 58 I D F G GG LE+ F +I + ++ + AN P+T + + + Sbjct: 17 IVDNFAGGGGASTGLERAFGRP-------VDIAINHDLEALAMHAANHPHTTHYCESVFD 69 Query: 59 IKTQDI---PDHDVLLAGFPCQPFSQA 82 + +I ++ C+ FS+A Sbjct: 70 VDPVEITGNRPVGLVWLSPDCKHFSKA 96 >gi|297526093|ref|YP_003668117.1| protein of unknown function Met10 [Staphylothermus hellenicus DSM 12710] gi|297255009|gb|ADI31218.1| protein of unknown function Met10 [Staphylothermus hellenicus DSM 12710] Length = 328 Score = 42.8 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 14/72 (19%) Query: 3 KITDLFCGIGGIRL---DLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDI- 56 KI DLF GIGG + + + F ++++NPY+ + N + G+I Sbjct: 181 KIIDLFSGIGGFPIHIASMHKAF-------ILANDLNPYAFVSIIDNILLNKKKLIGNIA 233 Query: 57 -AKIKTQDIPDH 67 +I ++ + Sbjct: 234 VTRIDAREFTNF 245 >gi|315230383|ref|YP_004070819.1| tRNA (Guanine37-N1) -methyltransferase [Thermococcus barophilus MP] gi|315183411|gb|ADT83596.1| tRNA (Guanine37-N1) -methyltransferase [Thermococcus barophilus MP] Length = 330 Score = 42.8 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 11/65 (16%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNT-LIFGDIA 57 + D+F G+G + L + V F+ +INP++VK + N PN I GD+ Sbjct: 185 VFDMFAGVGPYSILLAK-----KVRLVFACDINPWAVKYLEENKRLNKTPNVIPILGDVR 239 Query: 58 KIKTQ 62 K+ Q Sbjct: 240 KVAGQ 244 >gi|14520947|ref|NP_126422.1| hypothetical protein PAB0505 [Pyrococcus abyssi GE5] gi|74547078|sp|Q9V0Q0|TRM5B_PYRAB RecName: Full=tRNA (guanine-N(1)-)-methyltransferase Trm5b; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase gi|5458164|emb|CAB49653.1| Hypothetical protein, Met-10+ like protein [Pyrococcus abyssi GE5] Length = 330 Score = 42.8 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 11/65 (16%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------TLIFGDIA 57 + D+F G+G + L + E F+ +INP+++K + N I GD Sbjct: 186 VFDMFAGVGPFSILLAK-----KAELVFACDINPWAIKYLEENIKLNKVNNVVPILGDSR 240 Query: 58 KIKTQ 62 +I+ + Sbjct: 241 EIEVK 245 >gi|301619771|ref|XP_002939257.1| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog [Xenopus (Silurana) tropicalis] Length = 408 Score = 42.4 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 10/70 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFGDI 56 + DL+ GIG L H + E NP++V + N + GD Sbjct: 229 VVDLYSGIGYFTLPY---LVHAGASFVHACEWNPHAVSALKKNLVINRVSDKCHIHEGDN 285 Query: 57 AKIKTQDIPD 66 ++ D+ D Sbjct: 286 RQLTLSDVAD 295 >gi|303244608|ref|ZP_07330941.1| protein of unknown function Met10 [Methanothermococcus okinawensis IH1] gi|302485034|gb|EFL47965.1| protein of unknown function Met10 [Methanothermococcus okinawensis IH1] Length = 345 Score = 42.4 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 7/66 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + D+FCG+G + + ++ +INP +++ + N + I I +D Sbjct: 208 VVDMFCGVGPFSIACKNAKK------IYAIDINPNAIELLKKNIELNRLQNKITPI-LKD 260 Query: 64 IPDHDV 69 + DV Sbjct: 261 VRMVDV 266 >gi|221369948|ref|YP_002521044.1| Modification methylase [Rhodobacter sphaeroides KD131] gi|221163000|gb|ACM03971.1| Modification methylase [Rhodobacter sphaeroides KD131] Length = 540 Score = 42.4 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 33/133 (24%), Gaps = 53/133 (39%) Query: 4 ITDLFCGIGGIRLDLEQT--FNHRNVECFFSSEINPYSVKT---------YQANFP---- 48 I DLF G GG+ H S E + +T YQA Sbjct: 7 IVDLFAGPGGLGEGFASLDVGGHAPFRIGISVEKEASAHRTLTLRAFLRAYQARHGVLPQ 66 Query: 49 -------NTLIFGDIAKIKTQDI-----------------------------PDHD--VL 70 + D + + + D +L Sbjct: 67 AFIDFHAGLIPEPDWSAVDAAAWQRATAEAQCLELGTEPAAAAIDHAIGALRREFDDTIL 126 Query: 71 LAGFPCQPFSQAG 83 + G PCQ +S G Sbjct: 127 IGGPPCQAYSLVG 139 >gi|185177639|pdb|2YX1|A Chain A, Crystal Structure Of M.Jannaschii Trna M1g37 Methyltransferase gi|185177640|pdb|2YX1|B Chain B, Crystal Structure Of M.Jannaschii Trna M1g37 Methyltransferase Length = 336 Score = 42.4 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 13/66 (19%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 + D F G+G + + ++ +INP++++ + N I D+ Sbjct: 199 VVDXFAGVGPFSIACKNAKK------IYAIDINPHAIELLKKNIKLNKLEHKIIPILSDV 252 Query: 57 AKIKTQ 62 ++ + Sbjct: 253 REVDVK 258 >gi|169600707|ref|XP_001793776.1| hypothetical protein SNOG_03198 [Phaeosphaeria nodorum SN15] gi|160705497|gb|EAT89929.2| hypothetical protein SNOG_03198 [Phaeosphaeria nodorum SN15] Length = 2117 Score = 42.4 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 15/83 (18%) Query: 14 IRLDLEQTFNHR-NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD--------- 63 LEQ+ + V F++EI + + N +IF D+ + ++D Sbjct: 272 FSKALEQSGHSSLRVHQKFAAEIEVFKQAFIERNQAPEIIFRDVREFISEDATTAITAYG 331 Query: 64 ----IPD-HDVLLAGFPCQPFSQ 81 IP DVL+AGF C+ S+ Sbjct: 332 AEEHIPSGLDVLIAGFVCKDLSR 354 >gi|145345811|ref|XP_001417393.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577620|gb|ABO95686.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 2017 Score = 42.4 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 11/62 (17%) Query: 30 FFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----------DIP-DHDVLLAGFPCQP 78 FS EI P+ + NF ++F DI ++ ++P D D+L+AG C Sbjct: 110 VFSCEIEPFKQAYIERNFAPPILFRDIRELGGDQATTAYGAKINVPHDVDMLVAGTSCVD 169 Query: 79 FS 80 +S Sbjct: 170 YS 171 >gi|313244000|emb|CBY14873.1| unnamed protein product [Oikopleura dioica] Length = 552 Score = 42.4 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Query: 27 VECFFSSEINPYSVKTYQANF---PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 ++ + +IN + Y+ N +I DI + ++ L PCQPF++ G Sbjct: 178 LQVLSAMDINNNATSCYKLNHMSMEKDVINTDINAAPWEQTSGYNTLAMSPPCQPFTRNG 237 >gi|238027667|ref|YP_002911898.1| methyltransferase [Burkholderia glumae BGR1] gi|237876861|gb|ACR29194.1| Methyltransferase, putative [Burkholderia glumae BGR1] Length = 288 Score = 42.4 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIP------------------- 65 + +EI+PY+ + + P + I ++ D+ Sbjct: 4 YYNEIDPYAAQWLRNLIAAGHIAPGDVDERSIEDVRPDDLRGYTQCHFFAGLGGWSRALR 63 Query: 66 ------DHDVLLAGFPCQPFSQAG 83 D V PCQPFS AG Sbjct: 64 LAGWPDDRPVWTGSCPCQPFSVAG 87 >gi|323448404|gb|EGB04303.1| hypothetical protein AURANDRAFT_67350 [Aureococcus anophagefferens] Length = 1846 Score = 42.4 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 9/57 (15%), Positives = 23/57 (40%), Gaps = 2/57 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGDI 56 +++ + GIGG L++ + + + + S + ++ FP + I Sbjct: 1266 IQVIVFYSGIGGFDKGLQRAWEKHGAAFKVVLAIDNCELSNEIHRNTFPGVTVVNHI 1322 >gi|4520381|dbj|BAA75917.1| MTE8-ECOLI homolog~similar to methyltransferase [Pseudomonas putida] Length = 298 Score = 42.4 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 26/84 (30%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIP------------------- 65 + +EI+PY+ + + P + I + D+ Sbjct: 4 YYNEIDPYAAQWLRNLIAAGHIAPGDVDERSIEDVHPDDLKPYTQCHFFAGVGVWSYALR 63 Query: 66 ------DHDVLLAGFPCQPFSQAG 83 D V PCQPFS AG Sbjct: 64 RAGWPDDRPVWTGSCPCQPFSAAG 87 >gi|317033838|ref|XP_001395547.2| C-5 cytosine-specific DNA methylase [Aspergillus niger CBS 513.88] Length = 2044 Score = 42.4 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 21/85 (24%) Query: 16 LDLEQTFNHR------NVEC--FFSSEINPYSVKTY-QANFPNTLIFGDIAKIK------ 60 L LE H N E FS+EI+P + Y Q NF +F D+ ++ Sbjct: 121 LALEMVQKHLREQFNMNFEIRHIFSAEIDPL-RQAYIQRNFRPPRLFRDVKELNHRVAQT 179 Query: 61 ----TQDIPDH-DVLLAGFPCQPFS 80 + +P + D+L+AGF C FS Sbjct: 180 AYGSLEKVPKNPDILVAGFSCVDFS 204 >gi|190337628|gb|AAI63546.1| Dnmt7 protein [Danio rerio] Length = 1456 Score = 42.4 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 16/89 (17%) Query: 2 LKITDLFCGI--GGI---RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GD 55 +++ LF GI G + L + +E + +SEI S+ + + D Sbjct: 1178 IRVLSLFDGIATGYLVLKDLGFK-------LERYIASEICEDSIAVGMVKHEGKIEYVKD 1230 Query: 56 IAKIKTQDIPD---HDVLLAGFPCQPFSQ 81 + I + + + D+L+ G PC S Sbjct: 1231 VRTITRKHLAEWGPFDLLIGGSPCNDLSM 1259 >gi|134080265|emb|CAK97168.1| unnamed protein product [Aspergillus niger] Length = 2138 Score = 42.4 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 21/85 (24%) Query: 16 LDLEQTFNHR------NVEC--FFSSEINPYSVKTY-QANFPNTLIFGDIAKIK------ 60 L LE H N E FS+EI+P + Y Q NF +F D+ ++ Sbjct: 121 LALEMVQKHLREQFNMNFEIRHIFSAEIDPL-RQAYIQRNFRPPRLFRDVKELNHRVAQT 179 Query: 61 ----TQDIPDH-DVLLAGFPCQPFS 80 + +P + D+L+AGF C FS Sbjct: 180 AYGSLEKVPKNPDILVAGFSCVDFS 204 >gi|149050844|gb|EDM03017.1| DNA methyltransferase 3A [Rattus norvegicus] Length = 728 Score = 42.4 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 450 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 505 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 506 VTQKHIQEWGPFDLVIGGSPCNDLSI 531 >gi|17390482|gb|AAH18214.1| DNMT3A protein [Homo sapiens] Length = 285 Score = 42.4 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 7 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 62 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 63 VTQKHIQEWGPFDLVIGGSPCNDLSI 88 >gi|296482345|gb|DAA24460.1| DNA (cytosine-5-)-methyltransferase 3 alpha [Bos taurus] Length = 723 Score = 42.4 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 445 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 500 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 501 VTQKHIQEWGPFDLVIGGSPCNDLSI 526 >gi|161761041|pdb|2QRV|A Chain A, Structure Of Dnmt3a-Dnmt3l C-Terminal Domain Complex gi|161761044|pdb|2QRV|D Chain D, Structure Of Dnmt3a-Dnmt3l C-Terminal Domain Complex gi|161761045|pdb|2QRV|E Chain E, Structure Of Dnmt3a-Dnmt3l C-Terminal Domain Complex gi|161761048|pdb|2QRV|H Chain H, Structure Of Dnmt3a-Dnmt3l C-Terminal Domain Complex Length = 295 Score = 42.4 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 17 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 72 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 73 VTQKHIQEWGPFDLVIGGSPCNDLSI 98 >gi|291388505|ref|XP_002710656.1| PREDICTED: hypothetical protein, partial [Oryctolagus cuniculus] Length = 391 Score = 42.4 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DL+ GIG L H + E NP++V + N Sbjct: 229 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVAALRKN 268 >gi|258588219|pdb|2ZZM|A Chain A, The Complex Structure Of Atrm5 And Trnaleu Length = 336 Score = 42.4 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 13/66 (19%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 + D+F G+G + + ++ +INP++++ N I D+ Sbjct: 199 VVDMFAGVGPFSIACKNAKK------IYAIDINPHAIELLXKNIKLNKLEHKIIPILSDV 252 Query: 57 AKIKTQ 62 ++ + Sbjct: 253 REVDVK 258 >gi|417325|sp|P15840|MTSI_SPISQ RecName: Full=CPG DNA methylase; AltName: Full=Cytosine-specific methyltransferase SssI; Short=M.SssI gi|66468|pir||CTYMCS site-specific DNA-methyltransferase (cytosine-specific) (EC 2.1.1.73) SssI - Spiroplasma sp. (strain MQ1) gi|47553|emb|CAA35058.1| unnamed protein product [Spiroplasma sp.] Length = 386 Score = 42.4 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 39/139 (28%), Gaps = 58/139 (41%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE--------------------------- 34 L++ + F GIG R LE+ E +E Sbjct: 11 LRVFEAFAGIGAQRKALEKVRKDE-YEIVGLAEWYVPAIVMYQAIHNNFHTKLEYKSVSR 69 Query: 35 ---INPYSVKTYQANFPNTLIFG---------------------------DIAKIKTQDI 64 I+ KT N N + G DI + + + Sbjct: 70 EEMIDYLENKTLSWNSKNPVSNGYWKRKKDDELKIIYNAIKLSEKEGNIFDIRDLYKRTL 129 Query: 65 PDHDVLLAGFPCQPFSQAG 83 + D+L FPCQ SQ G Sbjct: 130 KNIDLLTYSFPCQDLSQQG 148 >gi|109102239|ref|XP_001083358.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A isoform 2 [Macaca mulatta] Length = 723 Score = 42.4 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 445 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 500 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 501 VTQKHIQEWGPFDLVIGGSPCNDLSI 526 >gi|66472506|ref|NP_001018312.1| DNA methyltransferase [Danio rerio] gi|62433267|dbj|BAD95481.1| DNA methyltransferase [Danio rerio] Length = 1433 Score = 42.4 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 16/89 (17%) Query: 2 LKITDLFCGI--GGI---RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GD 55 +++ LF GI G + L + +E + +SEI S+ + + D Sbjct: 1155 IRVLSLFDGIATGYLVLKDLGFK-------LERYIASEICEDSIAVGMVKHEGKIEYVKD 1207 Query: 56 IAKIKTQDIPD---HDVLLAGFPCQPFSQ 81 + I + + + D+L+ G PC S Sbjct: 1208 VRTITRKHLAEWGPFDLLIGGSPCNDLSM 1236 >gi|320037564|gb|EFW19501.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 242 Score = 42.4 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 9/48 (18%) Query: 41 KTYQANFPNTLIFGDIAKI------KTQDIPDHDVLLAGFPCQPFSQA 82 +TY+ NF T G+I ++ ++DI D+L PCQ FS A Sbjct: 2 ETYRLNF--TSAVGEICEVALFLTNDSEDI-IVDILHFSPPCQTFSSA 46 >gi|296224354|ref|XP_002758031.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Callithrix jacchus] Length = 723 Score = 42.4 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 445 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 500 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 501 VTQKHIQEWGPFDLVIGGSPCNDLSI 526 >gi|40226497|gb|AAH23612.1| DNMT3A protein [Homo sapiens] Length = 351 Score = 42.4 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 73 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 128 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 129 VTQKHIQEWGPFDLVIGGSPCNDLSI 154 >gi|77176455|ref|NP_715640.2| DNA (cytosine-5)-methyltransferase 3A isoform b [Homo sapiens] gi|114576490|ref|XP_001148731.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A isoform 5 [Pan troglodytes] Length = 723 Score = 42.4 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 445 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 500 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 501 VTQKHIQEWGPFDLVIGGSPCNDLSI 526 >gi|169153891|emb|CAQ14785.1| DNA (cytosine-5-)-methyltransferase 7 [Danio rerio] gi|169158982|emb|CAQ13240.1| DNA (cytosine-5-)-methyltransferase 7 [Danio rerio] Length = 1433 Score = 42.1 bits (99), Expect = 0.023, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 16/89 (17%) Query: 2 LKITDLFCGI--GGI---RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GD 55 +++ LF GI G + L + +E + +SEI S+ + + D Sbjct: 1155 IRVLSLFDGIATGYLVLKDLGFK-------LERYIASEICEDSIAVGMVKHEGKIEYVKD 1207 Query: 56 IAKIKTQDIPD---HDVLLAGFPCQPFSQ 81 + I + + + D+L+ G PC S Sbjct: 1208 VRTITRKHLAEWGPFDLLIGGSPCNDLSM 1236 >gi|260904526|ref|ZP_05912848.1| DNA-cytosine methyltransferase [Brevibacterium linens BL2] Length = 319 Score = 42.1 bits (99), Expect = 0.023, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 63 DIPDHDVLLAGFPCQPFSQAG 83 + P DV+L G PCQ FS+ G Sbjct: 5 ETPSADVILGGPPCQGFSKLG 25 >gi|307544701|ref|YP_003897180.1| C-5 cytosine-specific DNA methylase [Halomonas elongata DSM 2581] gi|307216725|emb|CBV41995.1| C-5 cytosine-specific DNA methylase [Halomonas elongata DSM 2581] Length = 523 Score = 42.1 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 4/61 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 + D F G GG +EQ + +P ++ + AN P+ D+ + Sbjct: 12 VVDNFAGGGGASEGIEQALGRP---VDLAINHDPTAIAVHTANHPDAEHSVADVWDVDPA 68 Query: 63 D 63 + Sbjct: 69 E 69 >gi|186686861|ref|YP_001870054.1| C-5 cytosine-specific DNA methylase [Nostoc punctiforme PCC 73102] gi|186469213|gb|ACC85013.1| C-5 cytosine-specific DNA methylase [Nostoc punctiforme PCC 73102] Length = 471 Score = 42.1 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 32/92 (34%), Gaps = 22/92 (23%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPY------SVK-TYQANFPNTLIFGDIAKI 59 LF G GGI E + + + E +P ++ + NF I ++ Sbjct: 144 LFAGGGGI----EAGMVNSGIRPVIAVEFDPTKPDLSRAIALNHHHNFSEYGCR--IVQL 197 Query: 60 KTQDI---------PDHDVLLAGFPCQPFSQA 82 Q++ D L A C FSQA Sbjct: 198 TVQEVARLGFIGFPRRPDYLHASPVCANFSQA 229 >gi|237717607|ref|ZP_04548088.1| LOW QUALITY PROTEIN: site-specific DNA-methyltransferase [Bacteroides sp. 2_2_4] gi|229453111|gb|EEO58902.1| LOW QUALITY PROTEIN: site-specific DNA-methyltransferase [Bacteroides sp. 2_2_4] Length = 315 Score = 42.1 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 12/18 (66%), Positives = 13/18 (72%) Query: 66 DHDVLLAGFPCQPFSQAG 83 +VL GFPCQPFS AG Sbjct: 3 KINVLTGGFPCQPFSVAG 20 >gi|51556265|ref|NP_001003957.1| DNA (cytosine-5)-methyltransferase 3A isoform 2 [Rattus norvegicus] gi|50539391|tpe|CAE52318.1| TPA: putative DNA (cytosine-5) methyltransferase 3a2 [Rattus norvegicus] Length = 689 Score = 42.1 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 411 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 466 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 467 VTQKHIQEWGPFDLVIGGSPCNDLSI 492 >gi|148222543|ref|NP_001090906.1| DNA (cytosine-5)-methyltransferase 3A [Sus scrofa] gi|110559302|gb|ABG75907.1| DNA methyltransferase 3a2 [Sus scrofa] Length = 689 Score = 42.1 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 411 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 466 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 467 VTQKHIQEWGPFDLVIGGSPCNDLSI 492 >gi|23954438|gb|AAN40037.1|AF480163_1 DNA cytosine methyltransferase 3A2 [Homo sapiens] Length = 689 Score = 42.1 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 411 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 466 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 467 VTQKHIQEWGPFDLVIGGSPCNDLSI 492 >gi|212223821|ref|YP_002307057.1| Met-10+ like protein [Thermococcus onnurineus NA1] gi|212008778|gb|ACJ16160.1| Met-10+ like protein [Thermococcus onnurineus NA1] Length = 331 Score = 42.1 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 11/62 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PN-TLIFGDIA 57 + D+F G+G + L + + F+ +INP++V+ + N PN I GD+ Sbjct: 185 VFDMFAGVGPYSILLAK-----KAKLVFACDINPWAVRYLEENRKLNKMPNVVPILGDVR 239 Query: 58 KI 59 KI Sbjct: 240 KI 241 >gi|57640432|ref|YP_182910.1| Met-10+ like protein [Thermococcus kodakarensis KOD1] gi|57158756|dbj|BAD84686.1| Met-10+ like protein [Thermococcus kodakarensis KOD1] Length = 331 Score = 42.1 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 11/65 (16%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNT-LIFGDIA 57 + D+F G+G + L + + F+ +INP++V+ + N PN I GD+ Sbjct: 185 VFDMFAGVGPYSILLAK-----KAKLVFACDINPWAVRYLEENKKLNKTPNVIPILGDVR 239 Query: 58 KIKTQ 62 K+ Q Sbjct: 240 KVAGQ 244 >gi|237703954|ref|ZP_04534435.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA] gi|226901866|gb|EEH88125.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA] Length = 367 Score = 42.1 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 14/59 (23%) Query: 36 NPYSVKTYQAN------FPNTLIFGDIAKIKTQDIP--------DHDVLLAGFPCQPFS 80 + + TY+ N L+ DI + + + + D++L G PCQ FS Sbjct: 1 DSAAANTYRKNMLERLEHKTELLQEDILLVGPKKLRKKIKLKKGELDMILGGPPCQGFS 59 >gi|114576494|ref|XP_001148525.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha isoform 2 [Pan troglodytes] Length = 594 Score = 42.1 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 316 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 371 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 372 VTQKHIQEWGPFDLVIGGSPCNDLSI 397 >gi|24371231|ref|NP_714965.1| DNA (cytosine-5)-methyltransferase 3A isoform 2 [Mus musculus] gi|23954440|gb|AAN40038.1|AF480164_1 DNA cytosine methyltransferase 3A2 [Mus musculus] gi|74180540|dbj|BAE34200.1| unnamed protein product [Mus musculus] gi|148669441|gb|EDL01388.1| DNA methyltransferase 3A, isoform CRA_b [Mus musculus] Length = 689 Score = 42.1 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 411 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 466 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 467 VTQKHIQEWGPFDLVIGGSPCNDLSI 492 >gi|187477779|ref|YP_785803.1| phage methyltransferase [Bordetella avium 197N] gi|115422365|emb|CAJ48890.1| putative phage methyltransferase [Bordetella avium 197N] Length = 344 Score = 42.1 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 26/84 (30%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIP------------------- 65 + +EI+PY+ + + P + I + D+ Sbjct: 7 YYNEIDPYAAQWLRNLIAAGHIAPGDVDERSIEDVHPDDLRGYTQAHWFAGIGVWSLALR 66 Query: 66 ------DHDVLLAGFPCQPFSQAG 83 D V PCQPFS AG Sbjct: 67 RAGWPDDRPVWTGSCPCQPFSAAG 90 >gi|330933137|ref|XP_003304061.1| hypothetical protein PTT_16483 [Pyrenophora teres f. teres 0-1] gi|311319572|gb|EFQ87831.1| hypothetical protein PTT_16483 [Pyrenophora teres f. teres 0-1] Length = 2131 Score = 42.1 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 14/65 (21%) Query: 31 FSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ-------------DIP-DHDVLLAGFPC 76 FS+EI + + NF ++F D+ + +IP D D+L+AGF C Sbjct: 259 FSAEIEVFKQAFIERNFRPKILFRDVRDFIRESSTKATTAYGAEVEIPTDIDILIAGFVC 318 Query: 77 QPFSQ 81 + S+ Sbjct: 319 RDLSR 323 >gi|114576492|ref|XP_001148587.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha isoform 3 [Pan troglodytes] Length = 598 Score = 42.1 bits (99), Expect = 0.027, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 320 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 375 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 376 VTQKHIQEWGPFDLVIGGSPCNDLSI 401 >gi|255941182|ref|XP_002561360.1| Pc16g10500 [Penicillium chrysogenum Wisconsin 54-1255] gi|211585983|emb|CAP93720.1| Pc16g10500 [Penicillium chrysogenum Wisconsin 54-1255] Length = 2162 Score = 42.1 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 13/62 (20%) Query: 31 FSSEINPYSVKTY-QANFPNTLIFGDIAKIKTQD----------IP-DHDVLLAGFPCQP 78 FS EI P+ ++Y + NF L+F DI ++ + IP D D+L+AG C Sbjct: 203 FSCEIVPF-KQSYIERNFRPPLLFRDITELGGDEARTAYGSSEVIPGDLDILVAGTACVD 261 Query: 79 FS 80 FS Sbjct: 262 FS 263 >gi|189424829|ref|YP_001952006.1| methyltransferase [Geobacter lovleyi SZ] gi|189421088|gb|ACD95486.1| methyltransferase [Geobacter lovleyi SZ] Length = 189 Score = 42.1 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +++ DLF G G L +E R E E + +++++ + N +T F D A++ Sbjct: 45 MRVLDLFAGSG--SLGIEAL--SRGAEQVTFIEKDRHALESLRLNLGHTG-FSDRAEVLP 99 Query: 62 QD 63 D Sbjct: 100 FD 101 >gi|149030964|gb|EDL85991.1| rCG37512 [Rattus norvegicus] Length = 461 Score = 42.1 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 8/84 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI--NPYSVKTYQANFPNTLIFGDIAKI 59 +++ LF GI L L+ VE + +SE+ + +V T + DI I Sbjct: 246 IRVLSLFDGIATGYLVLKDLGIK--VEKYVASEVCADSIAVGTIKHE-GQIKYVDDIQNI 302 Query: 60 KTQDIPD---HDVLLAGFPCQPFS 80 + I + D+++ G PC S Sbjct: 303 AKEHIDEWGPFDLVIGGSPCNDLS 326 >gi|326775658|ref|ZP_08234923.1| C-5 cytosine-specific DNA methylase [Streptomyces cf. griseus XylebKG-1] gi|326655991|gb|EGE40837.1| C-5 cytosine-specific DNA methylase [Streptomyces cf. griseus XylebKG-1] Length = 470 Score = 42.1 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 25/78 (32%), Gaps = 5/78 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDI 64 D F G GG Q + +V +QAN P+T DI+++ + Sbjct: 15 DGFAGAGGSSEGARQAGVTVRT---ALNHW-RLAVDVHQANHPDTAHDCADISQVDPRRY 70 Query: 65 PDHDVLLAGFPCQPFSQA 82 C S A Sbjct: 71 ATTTFAWFSPSCTNHSIA 88 >gi|254494408|ref|ZP_05107579.1| LOW QUALITY PROTEIN: DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae 1291] gi|268599718|ref|ZP_06133885.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae MS11] gi|226513448|gb|EEH62793.1| LOW QUALITY PROTEIN: DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae 1291] gi|268583849|gb|EEZ48525.1| LOW QUALITY PROTEIN: modification methylase [Neisseria gonorrhoeae MS11] Length = 201 Score = 42.1 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 9/57 (15%) Query: 34 EINPYSVKTYQANFPNTLIFGDIAKIKTQDIP--------DHD-VLLAGFPCQPFSQ 81 + +TY+AN I DI +++ + + D D +L+ PCQ +S Sbjct: 7 DYELSCKETYEANINAKFIQADIFELQPETLEKELGLKKNDDDLILIGCSPCQYWSV 63 >gi|330900173|gb|EGH31592.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 471 Score = 41.7 bits (98), Expect = 0.031, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 11/90 (12%) Query: 4 ITDLFCGIG----GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---FPNT--LIFG 54 + LF G G I L ++ V E + Y + + N + +T I Sbjct: 136 VCSLFHGGGVLDRAIHAGLARSGIDTFVRIGIEVE-DQYLDASLRNNPMLWRDTSFAICA 194 Query: 55 DIAKI-KTQDIPDHDVLLAGFPCQPFSQAG 83 D+ + + P+ D+++AG PC S+AG Sbjct: 195 DVRDVQRGTGTPECDLVVAGIPCTGASRAG 224 >gi|330880135|gb|EGH14284.1| modification methylase (cytosine-specific methyltransferase) [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 529 Score = 41.7 bits (98), Expect = 0.031, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 21/43 (48%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ 44 ++I DLF G GG+ + + S+E++P + T + Sbjct: 7 IQIVDLFAGPGGLGEGFSSFLDGSRFKIIVSAEMDPVAHSTLR 49 Score = 37.8 bits (88), Expect = 0.53, Method: Composition-based stats. Identities = 9/15 (60%), Positives = 11/15 (73%) Query: 69 VLLAGFPCQPFSQAG 83 VL+ G PCQ +S AG Sbjct: 124 VLIGGPPCQAYSLAG 138 >gi|257486963|ref|ZP_05641004.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 271 Score = 41.7 bits (98), Expect = 0.031, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 11/90 (12%) Query: 4 ITDLFCGIG----GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---FPNT--LIFG 54 + LF G G I L ++ V E + Y + + N + +T I Sbjct: 135 VCSLFHGGGVLDRAIHAGLARSGIDTFVRIGIEVE-DQYLDASLRNNPMLWRDTSFAICA 193 Query: 55 DIAKI-KTQDIPDHDVLLAGFPCQPFSQAG 83 D+ + + P+ D+++AG PC S+AG Sbjct: 194 DVRDVQRGTGTPECDLVVAGIPCTGASRAG 223 >gi|66044681|ref|YP_234522.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. syringae B728a] gi|63255388|gb|AAY36484.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. syringae B728a] Length = 471 Score = 41.7 bits (98), Expect = 0.031, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 11/90 (12%) Query: 4 ITDLFCGIG----GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---FPNT--LIFG 54 + LF G G I L ++ V E + Y + + N + +T I Sbjct: 136 VCSLFHGGGVLDRAIHAGLARSGIDTFVRIGIEVE-DQYLDASLRNNPMLWRDTSFAICA 194 Query: 55 DIAKI-KTQDIPDHDVLLAGFPCQPFSQAG 83 D+ + + P+ D+++AG PC S+AG Sbjct: 195 DVRDVQRGTGTPECDLVVAGIPCTGASRAG 224 >gi|30387420|ref|NP_848249.1| cytosine methylase [Enterobacteria phage epsilon15] gi|30266075|gb|AAO06104.1| cytosine methylase [Salmonella phage epsilon15] Length = 389 Score = 41.7 bits (98), Expect = 0.031, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 31/88 (35%) Query: 27 VECFFSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIP--------------- 65 ++ + +EI+ ++ + + P + I + D+ Sbjct: 2 IQAAYYNEIDQFAAQWLRNLIAGGHIAPGEVDERSIEDVTPDDLRGFTQCHFFAGIGVWS 61 Query: 66 ----------DHDVLLAGFPCQPFSQAG 83 D V PCQPFS AG Sbjct: 62 HSLRLAGWPDDKTVWTGSCPCQPFSAAG 89 >gi|297668050|ref|XP_002812266.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 3A-like [Pongo abelii] Length = 696 Score = 41.7 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 +++ LF GI L ++ + +SE+ S+ +++ GD+ Sbjct: 418 IRVLSLFDGI---ATGL-LVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRS 473 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 474 VTQKHIQEWGPFDLVIGGSPCNDLSI 499 >gi|297563371|ref|YP_003682345.1| hypothetical protein Ndas_4450 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847819|gb|ADH69839.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 211 Score = 41.7 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 11/77 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ DL+ G GG + ++ + +I+ +Q N+P D + T+ Sbjct: 6 RLLDLYSGAGGAAMG----YHLAGFDVVG-VDIH------HQPNYPFEHHVADALEYVTE 54 Query: 63 DIPDHDVLLAGFPCQPF 79 + D L CQ F Sbjct: 55 HGHEFDALHGSPTCQTF 71 >gi|282896697|ref|ZP_06304705.1| Res [Raphidiopsis brookii D9] gi|281198415|gb|EFA73303.1| Res [Raphidiopsis brookii D9] Length = 244 Score = 41.7 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 12/23 (52%) Query: 1 MLKITDLFCGIGGIRLDLEQTFN 23 +++ DLF G GG+ L + Sbjct: 168 IMRTVDLFSGCGGLSLGFQNVGK 190 >gi|127800251|gb|AAH79303.2| Trmt12 protein [Rattus norvegicus] Length = 437 Score = 41.7 bits (98), Expect = 0.034, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 10/70 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 228 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRKNLEINGVADRCQIHFGDN 284 Query: 57 AKIKTQDIPD 66 K+K + D Sbjct: 285 RKLKLSNTAD 294 >gi|171916113|ref|NP_001116448.1| tRNA wybutosine-synthesizing protein 2 homolog [Rattus norvegicus] gi|143679922|sp|Q4V8B8|TYW2_RAT RecName: Full=tRNA wybutosine-synthesizing protein 2 homolog; Short=tRNA-yW-synthesizing protein 2; AltName: Full=Alpha-amino-alpha-carboxypropyl transferase TYW2 gi|127800077|gb|AAH97456.2| Trmt12 protein [Rattus norvegicus] gi|149066341|gb|EDM16214.1| rCG59483 [Rattus norvegicus] Length = 437 Score = 41.7 bits (98), Expect = 0.034, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 10/70 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 + DL+ GIG L H + E NP++V + N + FGD Sbjct: 228 LVDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRKNLEINGVADRCQIHFGDN 284 Query: 57 AKIKTQDIPD 66 K+K + D Sbjct: 285 RKLKLSNTAD 294 >gi|14591212|ref|NP_143288.1| hypothetical protein PH1416 [Pyrococcus horikoshii OT3] gi|3257839|dbj|BAA30522.1| 330aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 330 Score = 41.7 bits (98), Expect = 0.034, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 11/62 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGDIA 57 + D+F G+G + L + F+ +INP+++K + N I D+ Sbjct: 186 VFDMFAGVGPFSILLAK-----KARMVFACDINPWAIKYLEENIKLNKVKNIIPILSDVT 240 Query: 58 KI 59 K+ Sbjct: 241 KV 242 >gi|327303100|ref|XP_003236242.1| hypothetical protein TERG_03291 [Trichophyton rubrum CBS 118892] gi|326461584|gb|EGD87037.1| hypothetical protein TERG_03291 [Trichophyton rubrum CBS 118892] Length = 2122 Score = 41.7 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 13/63 (20%) Query: 30 FFSSEINPYSVKTY-QANFPNTLIFGDIAKIKTQD----------IP-DHDVLLAGFPCQ 77 FS+EI+ + ++Y Q NF +IF D+ ++ ++ +P D D+L+ GF C Sbjct: 170 LFSAEIDAF-KQSYIQRNFSPEIIFRDVNELVAEEATTAFGSVKKVPTDPDLLVVGFSCV 228 Query: 78 PFS 80 FS Sbjct: 229 DFS 231 >gi|315050244|ref|XP_003174496.1| DNA repair protein rad8 [Arthroderma gypseum CBS 118893] gi|311339811|gb|EFQ99013.1| DNA repair protein rad8 [Arthroderma gypseum CBS 118893] Length = 2118 Score = 41.7 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 13/63 (20%) Query: 30 FFSSEINPYSVKTY-QANFPNTLIFGDIAKIKTQD----------IP-DHDVLLAGFPCQ 77 FS+EI+ + ++Y Q NF +IF D+ ++ ++ +P D D+L+ GF C Sbjct: 167 LFSAEIDAF-KQSYIQRNFSPEIIFRDVNELVAEEATTAFGSVRRVPTDPDLLVVGFSCV 225 Query: 78 PFS 80 FS Sbjct: 226 DFS 228 >gi|295397699|ref|ZP_06807772.1| 23S rRNA (uracil-5-)-methyltransferase [Aerococcus viridans ATCC 11563] gi|294974068|gb|EFG49822.1| 23S rRNA (uracil-5-)-methyltransferase [Aerococcus viridans ATCC 11563] Length = 469 Score = 41.7 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 6/79 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNH-RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 +K+ DLFCGIG L L +E +S IN N NT A+ Sbjct: 320 MKVLDLFCGIGTFSLPLAAASKSLAGIEIVENS-INSAKRNAADNNLDNTFFMASDARAG 378 Query: 61 TQDIPDH----DVLLAGFP 75 + +PD D+LL P Sbjct: 379 LRVLPDVWGQPDLLLLDPP 397 >gi|302665555|ref|XP_003024387.1| SNF2 family helicase, putative [Trichophyton verrucosum HKI 0517] gi|291188439|gb|EFE43776.1| SNF2 family helicase, putative [Trichophyton verrucosum HKI 0517] Length = 2047 Score = 41.7 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 13/63 (20%) Query: 30 FFSSEINPYSVKTY-QANFPNTLIFGDIAKIKTQD----------IP-DHDVLLAGFPCQ 77 FS+EI+ + ++Y Q NF +IF D+ ++ ++ +P D D+L+ GF C Sbjct: 96 LFSAEIDAF-KQSYIQRNFSPEIIFRDVNELVAEEATTAFGSVKKVPTDPDLLVVGFSCV 154 Query: 78 PFS 80 FS Sbjct: 155 DFS 157 >gi|302509586|ref|XP_003016753.1| SNF2 family helicase, putative [Arthroderma benhamiae CBS 112371] gi|291180323|gb|EFE36108.1| SNF2 family helicase, putative [Arthroderma benhamiae CBS 112371] Length = 2114 Score = 41.7 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 13/63 (20%) Query: 30 FFSSEINPYSVKTY-QANFPNTLIFGDIAKIKTQD----------IP-DHDVLLAGFPCQ 77 FS+EI+ + ++Y Q NF +IF D+ ++ ++ +P D D+L+ GF C Sbjct: 170 LFSAEIDAF-KQSYIQRNFSPEIIFRDVNELVAEEATTAFGSVKKVPTDPDLLVVGFSCV 228 Query: 78 PFS 80 FS Sbjct: 229 DFS 231 >gi|219882789|ref|YP_002477953.1| C-5 cytosine-specific DNA methylase [Arthrobacter chlorophenolicus A6] gi|219861795|gb|ACL42136.1| C-5 cytosine-specific DNA methylase [Arthrobacter chlorophenolicus A6] Length = 316 Score = 41.7 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 29/96 (30%), Gaps = 35/96 (36%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------------- 47 I DLF G GG E I+P F Sbjct: 9 ILDLFAGPGGWDRGAELAG------------IDP-------KRFVGIELDAAAVQTARAA 49 Query: 48 PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 + G++ +K D P L+A PC FS +G Sbjct: 50 GYNRVHGNVLDVKPSDYPRVKGLIASAPCPTFSSSG 85 >gi|319777547|ref|YP_004137198.1| cytosine-specific methyltransferase [Mycoplasma fermentans M64] gi|318038622|gb|ADV34821.1| Cytosine-specific methyltransferase [Mycoplasma fermentans M64] Length = 416 Score = 41.7 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 34/144 (23%), Gaps = 63/144 (43%) Query: 2 LKITDLFCGIGGIRLD---LEQTFNHRNVECFFSSEINPYSVKTYQANFP---------- 48 ++I + F GIG L + N E + + + + Y A Sbjct: 4 IRIFETFSGIGAQHKAITWLNKKQKEVNFEIVATCDWDIQATIAYAAIHHNLDETKIEKI 63 Query: 49 -NTLIFGDIAKIKT---------------------------------------QDIPD-- 66 N+ D KI DI Sbjct: 64 LNSNKLEDETKINEYLKSRTFSMTSKKAISSLKNKSYELKKALVAANLISNNFNDITKIT 123 Query: 67 --------HDVLLAGFPCQPFSQA 82 D++ FPCQ S A Sbjct: 124 KEQLDQLHFDLITYSFPCQGLSSA 147 >gi|124512074|ref|XP_001349170.1| modification methylase-like protein, putative [Plasmodium falciparum 3D7] gi|23498938|emb|CAD51016.1| modification methylase-like protein, putative [Plasmodium falciparum 3D7] Length = 706 Score = 41.7 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 7/49 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ---ANF 47 +K+ +L+CGIGG+ L Q FN+ +++I TY+ N Sbjct: 4 IKVLELYCGIGGLHYSLLQAFNNF----VHANKITEKKCDTYKDGIHNH 48 >gi|328708014|ref|XP_003243571.1| PREDICTED: hypothetical protein LOC100573483 isoform 1 [Acyrthosiphon pisum] Length = 445 Score = 41.7 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 14/79 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 + D FCG GG + L +T + +I+P ++ + N + GDI Sbjct: 290 VLDPFCGAGGNIIQLAKTCKR-----VLACDIDPNKIRLARHNAEIYGVAHKIDFVVGDI 344 Query: 57 AKIKTQDIPDHDVLLAGFP 75 +I + DV+ P Sbjct: 345 FQIYPK--LRADVVFMSPP 361 >gi|302790193|ref|XP_002976864.1| hypothetical protein SELMODRAFT_105763 [Selaginella moellendorffii] gi|300155342|gb|EFJ21974.1| hypothetical protein SELMODRAFT_105763 [Selaginella moellendorffii] Length = 230 Score = 41.7 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 I DLF GIG L + ++ E NP+++ + N Sbjct: 105 IVDLFAGIGYFVLPF---LVRARAKHVYACEWNPHALYALRRN 144 >gi|302797651|ref|XP_002980586.1| hypothetical protein SELMODRAFT_153963 [Selaginella moellendorffii] gi|300151592|gb|EFJ18237.1| hypothetical protein SELMODRAFT_153963 [Selaginella moellendorffii] Length = 338 Score = 41.7 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 I DLF GIG L + ++ E NP+++ + N Sbjct: 179 IVDLFAGIGYFVLPF---LVRARAKHVYACEWNPHALYALRRN 218 >gi|120610363|ref|YP_970041.1| C-5 cytosine-specific DNA methylase [Acidovorax citrulli AAC00-1] gi|120588827|gb|ABM32267.1| C-5 cytosine-specific DNA methylase [Acidovorax citrulli AAC00-1] Length = 710 Score = 41.7 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNT-LIFGDIAK 58 I D F G GG LE F +I +P ++ + N P+T + + + Sbjct: 17 IIDNFAGGGGTSTGLEAAFGRP-------VDIAINHDPEALAMHAINHPHTQHLCESVWE 69 Query: 59 IKTQDIP---DHDVLLAGFPCQPFSQA 82 + + ++ C+ FS+A Sbjct: 70 VDPIAVTGNQPVGLVWLSPDCKHFSKA 96 >gi|54025917|ref|YP_120159.1| hypothetical protein nfa39470 [Nocardia farcinica IFM 10152] gi|54017425|dbj|BAD58795.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 275 Score = 41.7 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 11/81 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPN-TLIFG 54 + DL GIG + F HR C E NP V+ + P T I G Sbjct: 71 RFIDLGAGIGRLSHGCRNLFGHRWAGDPEREFVCV---ERNPDYVRVGRKILPEATWICG 127 Query: 55 DIAKIKTQDIPDHDVLLAGFP 75 DI + + DV + P Sbjct: 128 DILDVPDMGLGRFDVAIGNPP 148 >gi|318064338|gb|ADV36400.1| phage methyltransferase [Edwardsiella phage eiAU] Length = 295 Score = 41.7 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIPDH----------------- 67 + +EI+PY+ + + P + I I ++ + Sbjct: 4 YYNEIDPYAAQWLRNLIAEGHIAPGIVDERSIEDITPNELTEFTQCHFFAGIGVWSLALR 63 Query: 68 ------D--VLLAGFPCQPFSQAG 83 D V PCQPFS AG Sbjct: 64 RAGWPDDRPVWTGSCPCQPFSAAG 87 >gi|47229157|emb|CAG03909.1| unnamed protein product [Tetraodon nigroviridis] Length = 628 Score = 41.3 bits (97), Expect = 0.039, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 16/89 (17%) Query: 2 LKITDLFCGI--GGI---RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GD 55 +++ LF GI G + L +E + +SEI S+ + + D Sbjct: 314 IRVLSLFDGIATGYLVLRDLGFR-------IERYIASEICEDSIAVGMVKHEGKIEYVND 366 Query: 56 IAKIKTQDIPD---HDVLLAGFPCQPFSQ 81 + + + + + D+L+ G PC S Sbjct: 367 VRTVTKKHLAEWGPFDLLIGGSPCNDLSM 395 >gi|299753284|ref|XP_001833175.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130] gi|298410229|gb|EAU88864.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130] Length = 1253 Score = 41.3 bits (97), Expect = 0.040, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 28/84 (33%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAK---------------IKTQDI------- 64 VE + E + + TY N P ++ + + + Sbjct: 763 VETRYVIEFSDSAAFTYHKNHPKAKVYCQDTNLLLKQAVEEDSGKAYVPLESLCSQLECP 822 Query: 65 ------PDHDVLLAGFPCQPFSQA 82 + D +L G PCQ FS+A Sbjct: 823 KMPSRQENIDFILGGPPCQGFSRA 846 >gi|328708016|ref|XP_003243572.1| PREDICTED: hypothetical protein LOC100573483 isoform 2 [Acyrthosiphon pisum] Length = 407 Score = 41.3 bits (97), Expect = 0.042, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 14/79 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 + D FCG GG + L +T + +I+P ++ + N + GDI Sbjct: 252 VLDPFCGAGGNIIQLAKTCKR-----VLACDIDPNKIRLARHNAEIYGVAHKIDFVVGDI 306 Query: 57 AKIKTQDIPDHDVLLAGFP 75 +I + DV+ P Sbjct: 307 FQIYPK--LRADVVFMSPP 323 >gi|223997022|ref|XP_002288184.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975292|gb|EED93620.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 2271 Score = 41.3 bits (97), Expect = 0.042, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 14/75 (18%) Query: 17 DLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----------KTQDIPD 66 L F H + FS EI PY NF +++++ DI K+ + + +P+ Sbjct: 487 GLGHLFKHDH---VFSCEIEPYKQAYLARNF-DSVLYPDIVKLCDEPPRDVYGQEKPLPE 542 Query: 67 HDVLLAGFPCQPFSQ 81 ++ +AG C+ FS Sbjct: 543 FNMFVAGTSCKNFSM 557 >gi|300781317|ref|ZP_07091171.1| RsmD family RNA methyltransferase [Corynebacterium genitalium ATCC 33030] gi|300533024|gb|EFK54085.1| RsmD family RNA methyltransferase [Corynebacterium genitalium ATCC 33030] Length = 195 Score = 41.3 bits (97), Expect = 0.042, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 19/84 (22%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLIFGDIA 57 ++ DLF G G L LE R + E +P +V+ + N PN I Sbjct: 46 RVLDLFSGSG--ALGLEAA--SRGADEVVLVESDPKAVEIIKHNAQAVGHPNVH----IE 97 Query: 58 KIKTQD-IPD-----HDVLLAGFP 75 +K +P D++LA P Sbjct: 98 PVKASAYVPRAPRAYFDMVLADPP 121 >gi|170024546|ref|YP_001721051.1| C-5 cytosine-specific DNA methylase [Yersinia pseudotuberculosis YPIII] gi|169751080|gb|ACA68598.1| C-5 cytosine-specific DNA methylase [Yersinia pseudotuberculosis YPIII] Length = 287 Score = 41.3 bits (97), Expect = 0.042, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIPDHD---------------- 68 + +EI+PY+ + + P + I +K +D+ + Sbjct: 6 YYNEIDPYAAQWLRNLIKAGHINPGYVDERSIVDVKPEDLTEFTQCHFFAGIGVWSYALR 65 Query: 69 ---------VLLAGFPCQPFSQAG 83 V PCQPFS AG Sbjct: 66 RAGWPDDEPVWTGSCPCQPFSAAG 89 >gi|326789842|ref|YP_004307663.1| C-5 cytosine-specific DNA methylase [Clostridium lentocellum DSM 5427] gi|326540606|gb|ADZ82465.1| C-5 cytosine-specific DNA methylase [Clostridium lentocellum DSM 5427] Length = 506 Score = 41.3 bits (97), Expect = 0.043, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 11/85 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------DIA 57 I D F G GG +E + ++ ++ N P+T + DI Sbjct: 4 IVDNFAGGGGASTGIELATGRSPDIAINH---DEAAILMHKTNHPSTKHYQESVWDIDIK 60 Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82 K+ D+ C+ FS+A Sbjct: 61 KVTAGQ--QVDLAWFSPDCKHFSKA 83 >gi|51596134|ref|YP_070325.1| modification methylase [Yersinia pseudotuberculosis IP 32953] gi|51589416|emb|CAH21038.1| putative modification methylase [Yersinia pseudotuberculosis IP 32953] Length = 581 Score = 41.3 bits (97), Expect = 0.043, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 17/91 (18%) Query: 2 LK--ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG- 54 +K I D F G GG +E S +I +P ++ + N P+TL + Sbjct: 1 MKEIIVDNFAGGGGASTGIEMATGR-------SVDIAINHDPNAIAMHTTNHPDTLHYCE 53 Query: 55 ---DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI + + C+ FS+A Sbjct: 54 SVFDIDPVAATAGRPVGLAWFSPDCRHFSKA 84 >gi|167841732|ref|ZP_02468416.1| putative cytosine-specific modification methylase [Burkholderia thailandensis MSMB43] Length = 587 Score = 41.3 bits (97), Expect = 0.044, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIKTQ 62 I D F G GG LE+ F + + ++ + AN P T + + + + Sbjct: 17 IIDNFAGGGGASTGLERAFGRP---VDVAINHDREALAMHAANHPQTAHYCESVFDVDPV 73 Query: 63 DIP---DHDVLLAGFPCQPFSQA 82 I ++ C+ FS+A Sbjct: 74 AITGNQPVGLVWLSPDCKHFSKA 96 >gi|308183509|ref|YP_003927636.1| DNA-cytosine methyltransferase [Helicobacter pylori PeCan4] gi|308065694|gb|ADO07586.1| DNA-cytosine methyltransferase [Helicobacter pylori PeCan4] Length = 238 Score = 41.3 bits (97), Expect = 0.044, Method: Composition-based stats. Identities = 11/16 (68%), Positives = 13/16 (81%) Query: 68 DVLLAGFPCQPFSQAG 83 D++L GFPCQ FS AG Sbjct: 4 DIVLGGFPCQDFSFAG 19 >gi|302687500|ref|XP_003033430.1| hypothetical protein SCHCODRAFT_15473 [Schizophyllum commune H4-8] gi|300107124|gb|EFI98527.1| hypothetical protein SCHCODRAFT_15473 [Schizophyllum commune H4-8] Length = 2254 Score = 41.3 bits (97), Expect = 0.044, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 11/66 (16%) Query: 26 NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD----------IP-DHDVLLAGF 74 VE FS EI P+ + NF L+F D+ ++ + +P D D+L+AG Sbjct: 215 GVEHVFSCEIEPFKQGYIERNFMPPLLFRDVCELGDAEAHTAFGALAPVPGDVDLLVAGT 274 Query: 75 PCQPFS 80 C FS Sbjct: 275 SCVDFS 280 >gi|255079758|ref|XP_002503459.1| DNA methyltransferase [Micromonas sp. RCC299] gi|226518726|gb|ACO64717.1| DNA methyltransferase [Micromonas sp. RCC299] Length = 173 Score = 41.3 bits (97), Expect = 0.044, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Query: 48 PNTLIFGDIAKIKTQDIP---DHDVLLAGFPCQPFSQAG 83 P I+ D+ + DIP D++ AGFPC S G Sbjct: 7 PTAPIWDDVRTLTAWDIPGSSPIDIIAAGFPCPDVSDLG 45 >gi|120610423|ref|YP_970101.1| C-5 cytosine-specific DNA methylase [Acidovorax citrulli AAC00-1] gi|120588887|gb|ABM32327.1| C-5 cytosine-specific DNA methylase [Acidovorax citrulli AAC00-1] Length = 669 Score = 41.3 bits (97), Expect = 0.044, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNT-LIFGDIAK 58 I D F G GG LE F +I +P ++ + N P+T + + Sbjct: 17 IIDNFAGGGGTSTGLEAAFGRP-------VDIAINHDPEALAMHAINHPHTQHLCESVWD 69 Query: 59 IKTQDIP---DHDVLLAGFPCQPFSQA 82 + + ++ C+ FS+A Sbjct: 70 VDPIAVTGNQPVGLVWLSPDCKHFSKA 96 >gi|227832990|ref|YP_002834697.1| putative DNA methylase [Corynebacterium aurimucosum ATCC 700975] gi|262182522|ref|ZP_06041943.1| putative DNA methylase [Corynebacterium aurimucosum ATCC 700975] gi|227454006|gb|ACP32759.1| putative DNA methylase [Corynebacterium aurimucosum ATCC 700975] Length = 200 Score = 41.3 bits (97), Expect = 0.045, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 4/46 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP 48 ++ DLF G G L LE R E E N +VK + N Sbjct: 46 RVLDLFAGSG--ALGLEAA--SRGAEEVVLVENNAAAVKVIRHNIG 87 >gi|195614602|gb|ACG29131.1| hypothetical protein [Zea mays] Length = 558 Score = 41.3 bits (97), Expect = 0.045, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 12/76 (15%) Query: 4 ITDLFCGIG--GIRLDLEQTFNHRNVECF-FSSEINPYSVKTYQANFPN--TLIFGDIAK 58 + DLFCG G G+ L + + E + E + K + N N T + GD+ K Sbjct: 407 VLDLFCGTGTIGLTLA-RRAKHIYGYEVVPEAIE---DARKNAKLNGINNATFVQGDLNK 462 Query: 59 IKT---QDIPDHDVLL 71 I ++ P D+++ Sbjct: 463 INESFGKEFPKPDIII 478 >gi|331245308|ref|XP_003335291.1| hypothetical protein PGTG_17071 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309314281|gb|EFP90872.1| hypothetical protein PGTG_17071 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 2163 Score = 41.3 bits (97), Expect = 0.045, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 11/70 (15%) Query: 22 FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD--------IP---DHDVL 70 V+ FS EI P+ + NF ++F D+ ++ + +P D D+L Sbjct: 237 GKDFRVQHVFSCEIEPFKQAYIERNFQPPILFRDVCELGEDEATTAYGAKVPVPTDVDML 296 Query: 71 LAGFPCQPFS 80 +AG C +S Sbjct: 297 VAGTSCVDYS 306 >gi|186476672|ref|YP_001858142.1| C-5 cytosine-specific DNA methylase [Burkholderia phymatum STM815] gi|184193131|gb|ACC71096.1| C-5 cytosine-specific DNA methylase [Burkholderia phymatum STM815] Length = 535 Score = 41.3 bits (97), Expect = 0.045, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 9/84 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIKTQ 62 I D F G GG LE+ F + +P ++ + AN P+T + + + + Sbjct: 17 IIDNFAGGGGASTGLERAFGRP---VDVAINHDPEAIAMHTANHPHTAHYCESVFGVDPI 73 Query: 63 DI----PDHDVLLAGFPCQPFSQA 82 + P ++ C+ FS+A Sbjct: 74 AVTRNQPAA-LVWLSPDCKHFSKA 96 >gi|162458589|ref|NP_001105094.1| DNA methyl transferase 106 [Zea mays] gi|22135461|gb|AAM93211.1|AF527610_1 DNA methyltransferase DMT106 [Zea mays] gi|223949331|gb|ACN28749.1| unknown [Zea mays] Length = 659 Score = 41.3 bits (97), Expect = 0.046, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 15/85 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55 +++ ++ GIGG + L + ++C S E + + K + + T G Sbjct: 538 IRVLSIYSGIGGAEVALHRLG--IPLKCVISVEESEVNRKILRRWWLKTEQTGVLRQHAG 595 Query: 56 IAKIKTQDIPD-------HDVLLAG 73 I K+KT I D D+++ G Sbjct: 596 IWKLKTHVIEDLVKEFGGFDLIIGG 620 >gi|326479420|gb|EGE03430.1| cytosine-specific DNA methylase [Trichophyton equinum CBS 127.97] Length = 2106 Score = 41.3 bits (97), Expect = 0.046, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 13/63 (20%) Query: 30 FFSSEINPYSVKTY-QANFPNTLIFGDIAKIKTQD----------IP-DHDVLLAGFPCQ 77 FS+EI+ + ++Y Q NF +IF D+ ++ ++ +P D D+L+ GF C Sbjct: 170 LFSAEIDAF-KQSYIQRNFSPEVIFRDVNELVAEEATTAFGSVKKVPTDPDLLVVGFSCV 228 Query: 78 PFS 80 FS Sbjct: 229 DFS 231 >gi|326471326|gb|EGD95335.1| hypothetical protein TESG_02821 [Trichophyton tonsurans CBS 112818] Length = 2122 Score = 41.3 bits (97), Expect = 0.046, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 13/63 (20%) Query: 30 FFSSEINPYSVKTY-QANFPNTLIFGDIAKIKTQD----------IP-DHDVLLAGFPCQ 77 FS+EI+ + ++Y Q NF +IF D+ ++ ++ +P D D+L+ GF C Sbjct: 170 LFSAEIDAF-KQSYIQRNFSPEVIFRDVNELVAEEATTAFGSVKKVPTDPDLLVVGFSCV 228 Query: 78 PFS 80 FS Sbjct: 229 DFS 231 >gi|254168567|ref|ZP_04875410.1| Met-10+ like-protein [Aciduliprofundum boonei T469] gi|289595689|ref|YP_003482385.1| protein of unknown function Met10 [Aciduliprofundum boonei T469] gi|197622401|gb|EDY34973.1| Met-10+ like-protein [Aciduliprofundum boonei T469] gi|289533476|gb|ADD07823.1| protein of unknown function Met10 [Aciduliprofundum boonei T469] Length = 346 Score = 41.3 bits (97), Expect = 0.049, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 11/77 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGDIA 57 I DLF GIG L L ++ + ++ E NP + + N +FGD Sbjct: 196 IVDLFAGIGYFTLPLAKSGRAKK---IYACEKNPIAYRYLLENIELNQLENIIPLFGDNR 252 Query: 58 KIKTQDIPDHDVLLAGF 74 I I D ++ G+ Sbjct: 253 NISPLKI--ADRVIMGY 267 >gi|109900394|ref|YP_663649.1| DNA-cytosine methyltransferase [Pseudoalteromonas atlantica T6c] gi|109702675|gb|ABG42595.1| DNA-cytosine methyltransferase [Pseudoalteromonas atlantica T6c] Length = 535 Score = 41.3 bits (97), Expect = 0.049, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 40/137 (29%), Gaps = 58/137 (42%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVK--TYQANFPNTLIFGDIA 57 +KI DLF G GG+ + + + S E + + T +A + FGD Sbjct: 5 IKIIDLFAGPGGLGEGFSAYKENASNPFKIAISIEKETSAHRTLTLRAFY---RQFGDDT 61 Query: 58 ---------------------KIK------------------TQDIPDHDV--------- 69 KI+ + + DV Sbjct: 62 PEEYYQFLRGELGKNPEDQLYKIERFAKQVSAAQKEARCFTLGEHNKEIDVAIAEAIGSD 121 Query: 70 ---LLAGFPCQPFSQAG 83 L+ G PCQ +S G Sbjct: 122 ECMLIGGPPCQAYSLVG 138 >gi|119896645|ref|YP_931858.1| putative methylase [Azoarcus sp. BH72] gi|119669058|emb|CAL92971.1| putative methylase [Azoarcus sp. BH72] Length = 326 Score = 41.3 bits (97), Expect = 0.049, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 31/101 (30%), Gaps = 38/101 (37%) Query: 1 MLKITDLFCGIGGIR------------LDLEQTFNHRNVECFFSSEINPYSVKTYQANFP 48 M DLFCG G L L+ N + +TY+ANFP Sbjct: 1 MPTFVDLFCGAG-FGARGAVRGGGVPLLGLDA--------------WN-LATETYKANFP 44 Query: 49 NTLIFGDIAKIKTQDIPDH-------DVLLAGFPCQPFSQA 82 I + +P DVLL C S A Sbjct: 45 QADT---ITEKIEDVVPKTLGRKYRPDVLLTSPECTSHSIA 82 >gi|116004541|ref|NP_001070632.1| tRNA wybutosine-synthesizing protein 2 homolog [Danio rerio] gi|123905829|sp|Q0P466|TYW2_DANRE RecName: Full=tRNA wybutosine-synthesizing protein 2 homolog; Short=tRNA-yW-synthesizing protein 2; AltName: Full=Alpha-amino-alpha-carboxypropyl transferase TYW2 gi|112419413|gb|AAI22255.1| Zgc:153361 [Danio rerio] Length = 408 Score = 41.3 bits (97), Expect = 0.049, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 10/71 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGD 55 + DL+ GIG L H N + E NP +V Q N T+ GD Sbjct: 220 TVVDLYAGIGYFTLPY---LVHANAAHVHACEWNPDAVAALQRNLEINGVSNRCTVHQGD 276 Query: 56 IAKIKTQDIPD 66 ++ D+ D Sbjct: 277 NRQLSLSDLAD 287 >gi|258574543|ref|XP_002541453.1| predicted protein [Uncinocarpus reesii 1704] gi|237901719|gb|EEP76120.1| predicted protein [Uncinocarpus reesii 1704] Length = 726 Score = 41.3 bits (97), Expect = 0.050, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 13/64 (20%) Query: 30 FFSSEINPYSVKTY-QANFPNTLIFGDIAKI----------KTQDIP-DHDVLLAGFPCQ 77 FS+EI P+ ++Y Q NF ++F D++++ + +P + D+L+AGF C Sbjct: 176 LFSAEIEPF-KQSYIQRNFSPDILFRDVSELVNNEATTAFGSVRTVPTNPDLLVAGFSCV 234 Query: 78 PFSQ 81 FSQ Sbjct: 235 DFSQ 238 >gi|119384793|ref|YP_915849.1| DNA-cytosine methyltransferase [Paracoccus denitrificans PD1222] gi|119374560|gb|ABL70153.1| DNA-cytosine methyltransferase [Paracoccus denitrificans PD1222] Length = 511 Score = 41.3 bits (97), Expect = 0.051, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 36/135 (26%), Gaps = 57/135 (42%) Query: 4 ITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKT---------YQANFP---- 48 I DLF G GG+ H S E + +T Y+A Sbjct: 7 IVDLFAGPGGLGEGFASLVEDGHAPFRIGISVEKEASAHRTLTLRAFLREYRARHGVLPK 66 Query: 49 ----------------------------------------NTLIFGDIAKIKTQDIPDHD 68 T I G IA +K + D Sbjct: 67 EFIDFHAGLASEPDWSAVDTEAWQHAIDEARALELGTEAAATAIDGAIATLKAKY--DDT 124 Query: 69 VLLAGFPCQPFSQAG 83 +++ G PCQ +S G Sbjct: 125 IVIGGPPCQAYSLVG 139 >gi|310815193|ref|YP_003963157.1| DNA-cytosine methyltransferase [Ketogulonicigenium vulgare Y25] gi|308753928|gb|ADO41857.1| DNA-cytosine methyltransferase [Ketogulonicigenium vulgare Y25] Length = 555 Score = 40.9 bits (96), Expect = 0.051, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 36/135 (26%), Gaps = 57/135 (42%) Query: 4 ITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKT---------YQANFP---- 48 I DLF G GG+ H S E + +T Y+A Sbjct: 51 IVDLFAGPGGLGEGFASFVEDGHAPFRIGISVEKEASAHRTLTLRAFLREYRARHGVLPK 110 Query: 49 ----------------------------------------NTLIFGDIAKIKTQDIPDHD 68 T I G IA +K + D Sbjct: 111 EFIDFHAGLASEPDWSAVDAEAWQHAIDEARALELGTGTAATAIDGAIATLKAKY--DDT 168 Query: 69 VLLAGFPCQPFSQAG 83 +L+ G PCQ +S G Sbjct: 169 ILIGGPPCQAYSLVG 183 >gi|224076026|ref|XP_002304879.1| hypothetical protein POPTRDRAFT_555247 [Populus trichocarpa] gi|222842311|gb|EEE79858.1| hypothetical protein POPTRDRAFT_555247 [Populus trichocarpa] Length = 363 Score = 40.9 bits (96), Expect = 0.051, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 + DL+ G G + L N+ ++ ++N + ++ + N P T Sbjct: 306 LLDLYSGCGAMSTGL---CLGLNLVTKWAVDLNINACQSLRLNHPET 349 >gi|67539812|ref|XP_663680.1| hypothetical protein AN6076.2 [Aspergillus nidulans FGSC A4] gi|40738861|gb|EAA58051.1| hypothetical protein AN6076.2 [Aspergillus nidulans FGSC A4] gi|259479739|tpe|CBF70236.1| TPA: SNF2 family helicase, putative (AFU_orthologue; AFUA_2G09120) [Aspergillus nidulans FGSC A4] Length = 2379 Score = 40.9 bits (96), Expect = 0.051, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 11/65 (16%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT----------QDIPD-HDVLLAGFP 75 + FS+EI PY + NF L+F D+A++K + +P D+L+AGF Sbjct: 355 FKHLFSAEIVPYKQAYIERNFRPRLLFRDVAELKDRVARTAYGSLEKVPKNADMLIAGFS 414 Query: 76 CQPFS 80 C FS Sbjct: 415 CVDFS 419 >gi|186895215|ref|YP_001872327.1| C-5 cytosine-specific DNA methylase [Yersinia pseudotuberculosis PB1/+] gi|186698241|gb|ACC88870.1| C-5 cytosine-specific DNA methylase [Yersinia pseudotuberculosis PB1/+] Length = 287 Score = 40.9 bits (96), Expect = 0.051, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIPDHD---------------- 68 + +EI+PY+ + + P + I +K +D+ + Sbjct: 6 YYNEIDPYAAQWLRNLIKAGHINPGYVDERSIVDVKPEDLTEFTQCHFFAGIGVWSYALR 65 Query: 69 ---------VLLAGFPCQPFSQAG 83 V PCQPFS AG Sbjct: 66 RAGWPDDEPVWTGSCPCQPFSAAG 89 >gi|307546796|ref|YP_003899275.1| C-5 cytosine-specific DNA methylase [Halomonas elongata DSM 2581] gi|307218820|emb|CBV44090.1| C-5 cytosine-specific DNA methylase [Halomonas elongata DSM 2581] Length = 682 Score = 40.9 bits (96), Expect = 0.054, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 4/58 (6%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT 61 DLF G GG LE N + ++ +QAN P + D+ ++ Sbjct: 61 VDLFAGGGGASTGLEMGLNRPVHVAINH---DADAISMHQANHPGADHYLSDVYEVDP 115 >gi|226494722|ref|NP_001143116.1| hypothetical protein LOC100275594 [Zea mays] gi|224031061|gb|ACN34606.1| unknown [Zea mays] Length = 558 Score = 40.9 bits (96), Expect = 0.056, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 10/75 (13%) Query: 4 ITDLFCGIGGIRLDL-EQTFNHRNVECF-FSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 + DLFCG G I L + + E + E + K + N N T + GD+ KI Sbjct: 407 VLDLFCGTGTIGLTFARRAKHIYGYEVVPEAIE---DARKNAKLNGINNATFVQGDLNKI 463 Query: 60 KT---QDIPDHDVLL 71 ++ P D+++ Sbjct: 464 NESFGKEFPKPDIII 478 >gi|260840790|ref|XP_002613805.1| hypothetical protein BRAFLDRAFT_124175 [Branchiostoma floridae] gi|229299195|gb|EEN69814.1| hypothetical protein BRAFLDRAFT_124175 [Branchiostoma floridae] Length = 1421 Score = 40.9 bits (96), Expect = 0.056, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 10/71 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGD 55 + DL+ GIG L V + E NP +V+ Q N T+ GD Sbjct: 235 TVVDLYAGIGYFTLPFLVHGKAAEVH---ACEWNPAAVEALQKNLQINKVQDRCTVHHGD 291 Query: 56 IAKIKTQDIPD 66 ++ + + D Sbjct: 292 NRQVCPRGVAD 302 >gi|196009009|ref|XP_002114370.1| hypothetical protein TRIADDRAFT_58107 [Trichoplax adhaerens] gi|190583389|gb|EDV23460.1| hypothetical protein TRIADDRAFT_58107 [Trichoplax adhaerens] Length = 725 Score = 40.9 bits (96), Expect = 0.057, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 14/79 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 I D FCG+GG + +T +H + +I+P +K + N I GD Sbjct: 565 IIDAFCGVGGNCIQFAKTCDH-----VIAIDIDPNKIKCARHNAKIYNVEHKIEFIVGDF 619 Query: 57 AKIKTQDIPDHDVLLAGFP 75 ++ DV+ P Sbjct: 620 LQLAPS--LKADVVFLSPP 636 >gi|167574287|ref|ZP_02367161.1| methyltransferase, putative [Burkholderia oklahomensis C6786] Length = 426 Score = 40.9 bits (96), Expect = 0.057, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 24/86 (27%), Gaps = 31/86 (36%) Query: 29 CFFSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIP----------------- 65 + +E +P + + P + DI + D+ Sbjct: 19 VAYYNEHDPVAAAWLRNLIAAGHIAPGDVDERDIRDVHPDDLRGYAQCHFFAGVGVWSYA 78 Query: 66 --------DHDVLLAGFPCQPFSQAG 83 D V PCQPFS AG Sbjct: 79 LRRAGWPDDRPVWTGSCPCQPFSAAG 104 >gi|317179556|dbj|BAJ57344.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori F30] Length = 78 Score = 40.9 bits (96), Expect = 0.058, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 8/66 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57 L LF G G R L EC ++EI + + N I GDI Sbjct: 7 LTYISLFSGAGVGRYGL----LEEGFECVATNEILEKRLNIQRINRKCKLDENCISGDIK 62 Query: 58 KIKTQD 63 K +T++ Sbjct: 63 KPETKE 68 >gi|312222342|emb|CBY02282.1| hypothetical protein [Leptosphaeria maculans] Length = 2343 Score = 40.9 bits (96), Expect = 0.059, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 15/83 (18%) Query: 14 IRLDLEQTFNHRN-VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ---------- 62 I LE+ N + FS+EI P + NF ++F D+ + Sbjct: 475 ISKALEEAGNPVPRFQHEFSAEIEPVKQGYIERNFQPKILFRDVRDFIPESTTTATTAYG 534 Query: 63 ---DIP-DHDVLLAGFPCQPFSQ 81 +IP D + +AGF C+ S+ Sbjct: 535 AEVEIPTDIHIFVAGFVCKDLSR 557 >gi|189192276|ref|XP_001932477.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187974083|gb|EDU41582.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 2299 Score = 40.9 bits (96), Expect = 0.059, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 14/65 (21%) Query: 31 FSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ-------------DIP-DHDVLLAGFPC 76 FS+EI + + NF ++F D+ + +IP D+L+AGF C Sbjct: 426 FSAEIEVFKQAFIERNFHPKILFRDVRDFIDESSTKATTAYGAEVEIPIGIDILVAGFVC 485 Query: 77 QPFSQ 81 + S+ Sbjct: 486 KDLSR 490 >gi|254224899|ref|ZP_04918514.1| Site-specific DNA methylase [Vibrio cholerae V51] gi|125622587|gb|EAZ50906.1| Site-specific DNA methylase [Vibrio cholerae V51] Length = 505 Score = 40.9 bits (96), Expect = 0.060, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG----D 55 + D F G GG +E N +I +P ++ ++ N P T + D Sbjct: 8 VVDNFAGGGGASTGMELGLNR-------HVDIAINHDPEAIDMHKMNHPETKHYCESVWD 60 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 + ++ + C+ FS+A Sbjct: 61 VDPVEACAGRPVGLAWFSPDCKHFSKA 87 >gi|333024419|ref|ZP_08452483.1| hypothetical protein STTU_1923 [Streptomyces sp. Tu6071] gi|332744271|gb|EGJ74712.1| hypothetical protein STTU_1923 [Streptomyces sp. Tu6071] Length = 244 Score = 40.9 bits (96), Expect = 0.061, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 18/82 (21%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-NPYSVKTYQANFPNTLIFGD-----I 56 ++ DLFC GG + + ++ + + N+P T D Sbjct: 16 RLLDLFCCAGGAATGYARA----GFDVVG-VDVAD-------RPNYPYTWHRADALAFLT 63 Query: 57 AKIKTQDIPDHDVLLAGFPCQP 78 + + +I D + A PCQ Sbjct: 64 RLLDSGEIAGFDAVHASPPCQA 85 >gi|224078173|ref|XP_002196308.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 3 beta [Taeniopygia guttata] Length = 811 Score = 40.9 bits (96), Expect = 0.062, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 22/92 (23%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEI--NPYS--------VKTYQANFPN 49 +++ LF G+ ++ + +SEI NP + TY Sbjct: 525 IRVLSLFDGV---TTGYT-VLKDLGIQVEKYIASEICENPIAMGKVRPEGNITY------ 574 Query: 50 TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81 +I K ++ D+++ G PC S Sbjct: 575 VHDVRNITKRNIEEWGPFDLVIGGSPCDDVSL 606 >gi|151556943|gb|AAI49705.1| TRMT12 protein [Bos taurus] gi|296480674|gb|DAA22789.1| tRNA wybutosine-synthesizing protein 2 homolog [Bos taurus] Length = 438 Score = 40.9 bits (96), Expect = 0.063, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 18/74 (24%) Query: 4 ITDLFCGIGGIRLDL----EQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LI 52 + DL+ GIG L E F H + E NP++V + N + Sbjct: 229 LVDLYAGIGYFTLPFLVHAEAAFVH-------ACEWNPHAVVALRNNLELNGVADRCQIH 281 Query: 53 FGDIAKIKTQDIPD 66 FGD K+K ++ D Sbjct: 282 FGDNRKLKLSNVAD 295 >gi|66792892|ref|NP_001019723.1| tRNA wybutosine-synthesizing protein 2 homolog [Bos taurus] gi|75057638|sp|Q58D65|TYW2_BOVIN RecName: Full=tRNA wybutosine-synthesizing protein 2 homolog; Short=tRNA-yW-synthesizing protein 2; AltName: Full=Alpha-amino-alpha-carboxypropyl transferase TYW2 gi|61554565|gb|AAX46579.1| hypothetical protein FLJ20772 [Bos taurus] Length = 438 Score = 40.9 bits (96), Expect = 0.063, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 18/74 (24%) Query: 4 ITDLFCGIGGIRLDL----EQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LI 52 + DL+ GIG L E F H + E NP++V + N + Sbjct: 229 LVDLYAGIGYFTLPFLVHAEAAFVH-------ACEWNPHAVVALRNNLELNGVADRCQIH 281 Query: 53 FGDIAKIKTQDIPD 66 FGD K+K ++ D Sbjct: 282 FGDNRKLKLSNVAD 295 >gi|13477024|ref|NP_108594.1| modification methylase [Mesorhizobium loti MAFF303099] gi|14027787|dbj|BAB54380.1| modification methylase [Mesorhizobium loti MAFF303099] Length = 667 Score = 40.9 bits (96), Expect = 0.064, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 9/85 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 + I LF G+GG LE + +P +V ++ +T D+ + Sbjct: 27 MTIV-LFAGMGGGCDGLEDA----GFHVHVAINHDPVAVAVHEKRHQHTRHLRCDVFEAD 81 Query: 61 TQDI---PDHDVLLAGFPCQPFSQA 82 + + L A C FS A Sbjct: 82 PRKVTGGRGVRALHASPDCTHFSVA 106 >gi|311109928|ref|YP_003982779.1| C-5 cytosine-specific DNA methylase 2 [Achromobacter xylosoxidans A8] gi|310764617|gb|ADP20064.1| C-5 cytosine-specific DNA methylase 2 [Achromobacter xylosoxidans A8] Length = 652 Score = 40.9 bits (96), Expect = 0.064, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG----D 55 I D F G GG LEQ F +I +P ++ + N P T + D Sbjct: 66 IIDNFAGGGGTSEGLEQAFGRP-------VDIAINHDPAAICLHAINHPWTKHYCESVWD 118 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 I IK ++ C+ FS+A Sbjct: 119 IDPIKVTGNRPVGLVWLSPDCRHFSKA 145 >gi|195978638|ref|YP_002123882.1| adenine/cytosine DNA methyltransferase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975343|gb|ACG62869.1| adenine/cytosine DNA methyltransferase [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 810 Score = 40.9 bits (96), Expect = 0.064, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 17/75 (22%) Query: 25 RNVECFFSSEINPYSVKTYQAN----FPNTLIFGDIAKIKT-----QDIPD--------H 67 N EC ++EI + + N F I GDI + T +I Sbjct: 2 ENFECIATNEIVERRLAIQKNNQKCQFETGYISGDIKESNTKQRIYNEIKRWKNLGNDRV 61 Query: 68 DVLLAGFPCQPFSQA 82 DV++A PCQ S A Sbjct: 62 DVVVATPPCQGMSVA 76 >gi|167534001|ref|XP_001748679.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772920|gb|EDQ86566.1| predicted protein [Monosiga brevicollis MX1] Length = 454 Score = 40.9 bits (96), Expect = 0.064, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF GIG L H + E NP++V+ + N Sbjct: 240 VVDLFAGIGYFTLPY---LVHARARFLHACEWNPHAVEALRRN 279 >gi|26988273|ref|NP_743698.1| methyltransferase, putative [Pseudomonas putida KT2440] gi|24983017|gb|AAN67162.1|AE016344_12 methyltransferase, putative [Pseudomonas putida KT2440] Length = 306 Score = 40.9 bits (96), Expect = 0.064, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 26/84 (30%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIP------------------- 65 + +EI+PY+ + + P + I + D+ Sbjct: 4 YYNEIDPYAAQWLRNLIAAGHIAPGDVDERSIEDVHPDDLKPYTQCHFFAGVGVWSYALR 63 Query: 66 ------DHDVLLAGFPCQPFSQAG 83 D V PCQPFS AG Sbjct: 64 RAGWPDDRPVWTGSCPCQPFSAAG 87 >gi|209884704|ref|YP_002288561.1| C-5 cytosine-specific DNA methylase [Oligotropha carboxidovorans OM5] gi|209872900|gb|ACI92696.1| C-5 cytosine-specific DNA methylase [Oligotropha carboxidovorans OM5] Length = 752 Score = 40.9 bits (96), Expect = 0.065, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62 + D F G GG + + +++ ++ N P T + D+ + Sbjct: 16 VIDSFAGGGGTSEGIVAALGRDPDIAINH---DKFALAMHRINHPGTEHLIEDVVTVDAI 72 Query: 63 DI---PDHDVLLAGFPCQPFSQA 82 + +L C+ S+A Sbjct: 73 SMCAGRPVGMLWMSPDCKDHSKA 95 >gi|134095045|ref|YP_001100120.1| putative modification methylase [Herminiimonas arsenicoxydans] gi|133738948|emb|CAL61995.1| Putative modification methylase AgeI (Cytosine-specific methyltransferase AgeI) [Herminiimonas arsenicoxydans] Length = 523 Score = 40.9 bits (96), Expect = 0.066, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 34/131 (25%), Gaps = 52/131 (39%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--------------ANFPN 49 I DLF G GG+ + S+E+ + +T + A P Sbjct: 12 IVDLFAGPGGLGEGFSGLSKNA-FHIAISAEMEESAHQTLRLRAYYRLLKKKGVEALRPY 70 Query: 50 TLIFGDIAKIKTQDIPDHD-------------------------------------VLLA 72 L + + + D VL+ Sbjct: 71 YLFCNGVTALPYDEKSSPDWEEAGREALRLTLGDEDDNLRLDHLLKEMKIGADKPWVLIG 130 Query: 73 GFPCQPFSQAG 83 G PCQ +S G Sbjct: 131 GPPCQAYSLVG 141 >gi|300858340|ref|YP_003783323.1| hypothetical protein cpfrc_00922 [Corynebacterium pseudotuberculosis FRC41] gi|300685794|gb|ADK28716.1| hypothetical protein cpfrc_00922 [Corynebacterium pseudotuberculosis FRC41] gi|302206058|gb|ADL10400.1| N6-adenine-specific methylasee [Corynebacterium pseudotuberculosis C231] gi|302330609|gb|ADL20803.1| Putative DNA methylase [Corynebacterium pseudotuberculosis 1002] gi|308276294|gb|ADO26193.1| Putative DNA methylase [Corynebacterium pseudotuberculosis I19] Length = 192 Score = 40.5 bits (95), Expect = 0.067, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 9/55 (16%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLI 52 ++ DLF G G L LE R + E NP +V+ + N PN + Sbjct: 46 RVLDLFAGSG--ALGLEAA--SRGADEVVLVENNPKAVQIIRHNMQVVGHPNVTV 96 >gi|325190286|emb|CCA24762.1| trimethylguanosine synthase putative [Albugo laibachii Nc14] Length = 753 Score = 40.5 bits (95), Expect = 0.068, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 14/80 (17%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-------PYSVKTYQANFPNTLIFGD 55 + DLF G GG + L QT +H + EI+ ++ + Y + I GD Sbjct: 597 TVVDLFAGCGGNTIQLAQTCHH-----VIAIEIDPLRIHKAKHNAQVYGVSDRIEWICGD 651 Query: 56 IAKIKTQDIPDHDVLLAGFP 75 ++ ++ DV+ P Sbjct: 652 ALEVISR--LQADVIFLSPP 669 >gi|296813227|ref|XP_002846951.1| DNA repair protein rad8 [Arthroderma otae CBS 113480] gi|238842207|gb|EEQ31869.1| DNA repair protein rad8 [Arthroderma otae CBS 113480] Length = 1955 Score = 40.5 bits (95), Expect = 0.068, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 13/63 (20%) Query: 30 FFSSEINPYSVKTY-QANFPNTLIFGDIAKIKTQD----------IP-DHDVLLAGFPCQ 77 FS+EI+ + ++Y Q NF +IF D+ ++ + +P D D+L+ GF C Sbjct: 170 LFSAEIDAF-KQSYIQRNFAPEIIFRDVNELVADEATTAFGSVRKVPTDPDLLVVGFSCV 228 Query: 78 PFS 80 FS Sbjct: 229 DFS 231 >gi|191174004|ref|ZP_03035521.1| cytosine methylase [Escherichia coli F11] gi|190905695|gb|EDV65317.1| cytosine methylase [Escherichia coli F11] gi|324014345|gb|EGB83564.1| C-5 cytosine-specific DNA methylase [Escherichia coli MS 60-1] Length = 342 Score = 40.5 bits (95), Expect = 0.069, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 25/84 (29%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIPDH----------------- 67 + +EI+P + + + P + I + D+ Sbjct: 5 YYNEIDPNAAQWLRNLIAAGHIAPGEVDERSIEDVAPDDLRGFTQCHFFAGIGVWSYALR 64 Query: 68 -----D---VLLAGFPCQPFSQAG 83 D V PCQPFS AG Sbjct: 65 LAGWPDNKPVWTGSCPCQPFSSAG 88 >gi|323448401|gb|EGB04300.1| hypothetical protein AURANDRAFT_67346 [Aureococcus anophagefferens] Length = 1640 Score = 40.5 bits (95), Expect = 0.070, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 2/52 (3%) Query: 7 LFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGDI 56 + GIGG L++ + + + + S + +Q FP + I Sbjct: 127 FYSGIGGFDKGLQRAWEKHGAAFKVVLAIDNCELSNEIHQNTFPGVTVVNHI 178 >gi|123442605|ref|YP_001006582.1| putative cytosine-specific modification methylase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089566|emb|CAL12415.1| putative cytosine-specific modification methylase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 581 Score = 40.5 bits (95), Expect = 0.070, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 17/91 (18%) Query: 2 LK--ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG- 54 +K I D F G GG +E S +I +P ++ + N P+TL + Sbjct: 1 MKEIIVDNFAGGGGASTGIELATGR-------SVDIAINHDPNAIAMHTTNHPDTLHYCE 53 Query: 55 ---DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 DI + + C+ FS+A Sbjct: 54 SVFDIDPVAATAGRPVGLAWFSPDCRHFSKA 84 >gi|317048385|ref|YP_004116033.1| C-5 cytosine-specific DNA methylase [Pantoea sp. At-9b] gi|316950002|gb|ADU69477.1| C-5 cytosine-specific DNA methylase [Pantoea sp. At-9b] Length = 584 Score = 40.5 bits (95), Expect = 0.073, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG----D 55 I D F G GG +E S +I +P ++ + N P+TL + D Sbjct: 5 IVDNFAGGGGASTGIEMATGR-------SVDIAINHDPNAIAMHTTNHPDTLHYCESVFD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 I + + C+ FS+A Sbjct: 58 IDPLAATAGAPVGLAWFSPDCRHFSKA 84 >gi|320040099|gb|EFW22033.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 2095 Score = 40.5 bits (95), Expect = 0.075, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 13/64 (20%) Query: 30 FFSSEINPYSVKTY-QANFPNTLIFGDIAKIKTQD----------IP-DHDVLLAGFPCQ 77 FS+EI P+ ++Y Q NF ++F D+ ++ + +P + D+L+AGF C Sbjct: 176 LFSAEIEPF-KQSYIQRNFSPAILFRDVNELVNDEATTAFGSMRKVPTNLDLLVAGFSCV 234 Query: 78 PFSQ 81 FSQ Sbjct: 235 DFSQ 238 >gi|303312199|ref|XP_003066111.1| DNA repair helicase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240105773|gb|EER23966.1| DNA repair helicase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 2149 Score = 40.5 bits (95), Expect = 0.075, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 13/64 (20%) Query: 30 FFSSEINPYSVKTY-QANFPNTLIFGDIAKIKTQD----------IP-DHDVLLAGFPCQ 77 FS+EI P+ ++Y Q NF ++F D+ ++ + +P + D+L+AGF C Sbjct: 176 LFSAEIEPF-KQSYIQRNFSPAILFRDVNELVNDEATTAFGSMRKVPTNLDLLVAGFSCV 234 Query: 78 PFSQ 81 FSQ Sbjct: 235 DFSQ 238 >gi|198434782|ref|XP_002127192.1| PREDICTED: similar to tRNA methyltransferase 12 homolog [Ciona intestinalis] Length = 294 Score = 40.5 bits (95), Expect = 0.075, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + D+F GIG L L H + E NP SV +AN Sbjct: 140 VIDMFAGIGYFTLPL---LVHSKARFVHACEWNPDSVTALKAN 179 >gi|311279157|ref|YP_003941388.1| C-5 cytosine-specific DNA methylase [Enterobacter cloacae SCF1] gi|308748352|gb|ADO48104.1| C-5 cytosine-specific DNA methylase [Enterobacter cloacae SCF1] Length = 659 Score = 40.5 bits (95), Expect = 0.075, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 34/93 (36%), Gaps = 27/93 (29%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG-DIAK 58 I D F G GG +E S +I + +V + N P TL + D+ Sbjct: 5 IVDNFAGGGGASTGIEMAIGR-------SVDIAINHDQNAVAMHTTNHPETLHYCEDVFD 57 Query: 59 IKTQDIPDHDVLLAGFP---------CQPFSQA 82 I + V AG P C+ FS+A Sbjct: 58 IDPR------VATAGRPVALAWFSPDCRHFSKA 84 >gi|194707300|gb|ACF87734.1| unknown [Zea mays] Length = 360 Score = 40.5 bits (95), Expect = 0.075, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 10/75 (13%) Query: 4 ITDLFCGIGGIRLDL-EQTFNHRNVECF-FSSEINPYSVKTYQANFPN--TLIFGDIAKI 59 + DLFCG G I L + + E + E + K + N N T + GD+ KI Sbjct: 209 VLDLFCGTGTIGLTFARRAKHIYGYEVVPEAIE---DARKNAKLNGINNATFVQGDLNKI 265 Query: 60 KT---QDIPDHDVLL 71 ++ P D+++ Sbjct: 266 NESFGKEFPKPDIII 280 >gi|261363795|ref|ZP_05976678.1| C-5 cytosine-specific DNA methylase family protein [Neisseria mucosa ATCC 25996] gi|288568375|gb|EFC89935.1| C-5 cytosine-specific DNA methylase family protein [Neisseria mucosa ATCC 25996] Length = 530 Score = 40.5 bits (95), Expect = 0.077, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 18/77 (23%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG-DIAK 58 I DLF G GG +EQ +I + ++ + AN P T F D+ Sbjct: 16 ICDLFAGGGGASCGIEQATG-------LYVDIAVNHDAQAISMHTANHPQTRHFQTDVFD 68 Query: 59 IKTQDIPDHDVLLAGFP 75 + G P Sbjct: 69 VDPAQ------ACGGRP 79 >gi|320539479|ref|ZP_08039148.1| putative methyltransferase [Serratia symbiotica str. Tucson] gi|320030604|gb|EFW12614.1| putative methyltransferase [Serratia symbiotica str. Tucson] Length = 300 Score = 40.5 bits (95), Expect = 0.078, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIPDH----------------- 67 + +EI+ Y+ + + P + I +K D+ ++ Sbjct: 4 YYNEIDSYAAQWLRNLIAAGHIAPGDVDERSIEDVKPDDLRNYTQCHFFAGIGVWSYALR 63 Query: 68 -----D---VLLAGFPCQPFSQAG 83 D V PCQPFS AG Sbjct: 64 NAGWPDEKPVWTGSCPCQPFSAAG 87 >gi|84495908|ref|ZP_00994762.1| modification methylase (Cytosine-specific methyltransferase) [Janibacter sp. HTCC2649] gi|84382676|gb|EAP98557.1| modification methylase (Cytosine-specific methyltransferase) [Janibacter sp. HTCC2649] Length = 498 Score = 40.5 bits (95), Expect = 0.081, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 36/136 (26%), Gaps = 56/136 (41%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKTYQAN-------------- 46 + DLF G GG+ S E++ + T + Sbjct: 1 MVDLFAGPGGLNEGFSSLLRPDGDQVFRAVSSFEMDARACDTLRLRSAVRSLRGSTEGLS 60 Query: 47 FPNTLIFGDI-------------------AKIKTQDIPDH------DV------------ 69 F + + G+I ++ ++ DV Sbjct: 61 FYSGFLNGEISWSQLIEQREVAAGLRDAERHVQQVELGPASRDASSDVIRDALSSAGGGP 120 Query: 70 --LLAGFPCQPFSQAG 83 L+ G PCQ +S G Sbjct: 121 WVLIGGPPCQAYSLVG 136 >gi|238493629|ref|XP_002378051.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] gi|220696545|gb|EED52887.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] Length = 2055 Score = 40.5 bits (95), Expect = 0.083, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 12/79 (15%) Query: 14 IRLDLEQTFN-HRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT----------Q 62 +DL + FN FS+EI PY + NF L+F D+ ++K + Sbjct: 148 FSIDLRKHFNRDFKFRHLFSAEIVPYKQRYIDNNFHPRLLFRDVTQLKDRVAQTAYGSLE 207 Query: 63 DIP-DHDVLLAGFPCQPFS 80 +P + D+L+AGF C FS Sbjct: 208 KVPRNPDMLIAGFSCVDFS 226 >gi|119193294|ref|XP_001247253.1| hypothetical protein CIMG_01024 [Coccidioides immitis RS] Length = 2097 Score = 40.5 bits (95), Expect = 0.083, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 13/64 (20%) Query: 30 FFSSEINPYSVKTY-QANFPNTLIFGDIAKIKTQD----------IP-DHDVLLAGFPCQ 77 FS+EI P+ ++Y Q NF ++F D+ ++ + +P + D+L+AGF C Sbjct: 210 LFSAEIEPF-KQSYIQRNFSPAILFRDVNELVNDEATTAFGSMRKVPTNPDLLVAGFSCV 268 Query: 78 PFSQ 81 FSQ Sbjct: 269 DFSQ 272 >gi|47225350|emb|CAG09850.1| unnamed protein product [Tetraodon nigroviridis] Length = 391 Score = 40.5 bits (95), Expect = 0.083, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 10/71 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGD 55 + DL+ GIG L H + E NP +VK Q N T+ GD Sbjct: 210 TVVDLYAGIGYFTLPY---LVHAKARHVHACEWNPEAVKALQKNLVTNGVSEHCTIHPGD 266 Query: 56 IAKIKTQDIPD 66 K++ D+ D Sbjct: 267 NRKLQLVDVAD 277 >gi|260845243|ref|YP_003223021.1| putative methyltransferase [Escherichia coli O103:H2 str. 12009] gi|257760390|dbj|BAI31887.1| predicted methyltransferase [Escherichia coli O103:H2 str. 12009] Length = 337 Score = 40.5 bits (95), Expect = 0.084, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 25/84 (29%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIPDH----------------- 67 + +EI+P + + + P + I + D+ Sbjct: 5 YYNEIDPNAAQWLRNLIAAGHIAPGEVDERSIEDVAPDDLRGFTQCHFFAGIGVWSYALR 64 Query: 68 -----D---VLLAGFPCQPFSQAG 83 D V PCQPFS AG Sbjct: 65 LAGWPDNKPVWTGSCPCQPFSSAG 88 >gi|304436864|ref|ZP_07396829.1| C-5 cytosine-specific DNA methylase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370179|gb|EFM23839.1| C-5 cytosine-specific DNA methylase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 409 Score = 40.5 bits (95), Expect = 0.085, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG----D 55 I D F G GG +E S +I +P ++ ++AN P++ + D Sbjct: 4 IVDNFAGGGGASTGIELATGR-------SVDIAINHDPTAIAMHRANHPSSKHYCENVWD 56 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 + ++ + C+ FS+A Sbjct: 57 VDPVEACAGRPVGLAWFSPDCKHFSKA 83 >gi|254711754|ref|ZP_05173565.1| DNA-cytosine methyltransferase [Brucella pinnipedialis B2/94] gi|256029614|ref|ZP_05443228.1| DNA-cytosine methyltransferase [Brucella pinnipedialis M292/94/1] gi|260167298|ref|ZP_05754109.1| DNA-cytosine methyltransferase [Brucella sp. F5/99] Length = 258 Score = 40.5 bits (95), Expect = 0.085, Method: Composition-based stats. Identities = 8/16 (50%), Positives = 11/16 (68%) Query: 68 DVLLAGFPCQPFSQAG 83 D++ G PCQ +S AG Sbjct: 17 DLITGGPPCQDYSVAG 32 >gi|212693469|ref|ZP_03301597.1| hypothetical protein BACDOR_02986 [Bacteroides dorei DSM 17855] gi|212663982|gb|EEB24556.1| hypothetical protein BACDOR_02986 [Bacteroides dorei DSM 17855] Length = 1000 Score = 40.5 bits (95), Expect = 0.086, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 9/73 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQ 62 I D+ CG+G N N + +I+ +V + +P+ + DI + + Sbjct: 95 ILDMCCGMGNF---FNHLPNRHN---VYGFDIDGKAVAVAKYLYPDAHIEKCDIRQYDPE 148 Query: 63 DIPDHDVLLAGFP 75 D+++ P Sbjct: 149 Q--RFDIIIGNPP 159 >gi|182437140|ref|YP_001824859.1| hypothetical protein SGR_3347 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465656|dbj|BAG20176.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 218 Score = 40.1 bits (94), Expect = 0.088, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 11/81 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ DLFC GG + + + I+ Y P I D Sbjct: 6 LRVLDLFCCQGGAAMGYHRA----GFDVTG---IDLAPQPRY----PFRFIQADAIDYVR 54 Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 + + D + A PCQ +S+A Sbjct: 55 EHGAEFDFIHASPPCQRYSRA 75 >gi|213964420|ref|ZP_03392620.1| RNA methyltransferase, RsmD family [Corynebacterium amycolatum SK46] gi|213952613|gb|EEB63995.1| RNA methyltransferase, RsmD family [Corynebacterium amycolatum SK46] Length = 188 Score = 40.1 bits (94), Expect = 0.088, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 9/77 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ DLF G G L LE R E +P ++ + N D+A + Sbjct: 47 RVLDLFAGSG--ALGLEAA--SRGARSVVLVENDPNAIAAIEKNIRTVGHP-DVA-VSPM 100 Query: 63 DIPDHDVLLAGFPCQPF 79 + + LAG P +PF Sbjct: 101 KVSSY---LAGAPGEPF 114 >gi|328869161|gb|EGG17539.1| DNA (cytosine-5-)-methyltransferase [Dictyostelium fasciculatum] Length = 373 Score = 40.1 bits (94), Expect = 0.089, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 35/106 (33%), Gaps = 28/106 (26%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54 + I + F GIGG+ + + V+ F +IN + Y N+ + Sbjct: 1 MNIIEYFSGIGGMYYSAKLSGVPFTVKQSF--DINTTANTCY--NYSIHSLSNTDNNNNT 56 Query: 55 -----------------DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 D +K + + L PCQPF + G Sbjct: 57 TNSKSKKKNVVVNNKSIDALTVKDLESYKANTWLMSPPCQPFCRVG 102 >gi|71409977|ref|XP_807306.1| proliferator-activated receptor-interacting protein (PRIP) interacting protein (PIMT) [Trypanosoma gi|70871278|gb|EAN85455.1| proliferator-activated receptor-interacting protein (PRIP) interacting protein (PIMT), putative [Trypanosoma cruzi] Length = 250 Score = 40.1 bits (94), Expect = 0.089, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 5/43 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLFCG GG + L + E + +I+P +++ + N Sbjct: 64 VLDLFCGCGGDTVQLARV-----YEKVVAVDIDPDAIEAAKKN 101 >gi|186685136|ref|YP_001868332.1| hypothetical protein Npun_F5051 [Nostoc punctiforme PCC 73102] gi|186467588|gb|ACC83389.1| hypothetical protein Npun_F5051 [Nostoc punctiforme PCC 73102] Length = 174 Score = 40.1 bits (94), Expect = 0.091, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 4/46 (8%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 LF G G+ L +E+ EI+ + KT N P+ Sbjct: 9 IALFAGAFGLDLGIEEA----GFYTVSVVEIDADATKTIILNRPHN 50 >gi|312876959|ref|ZP_07736934.1| sun protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796274|gb|EFR12628.1| sun protein [Caldicellulosiruptor lactoaceticus 6A] Length = 406 Score = 40.1 bits (94), Expect = 0.094, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 10/83 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLIFGDIA 57 K+ DL GG + +IN + + + N F N ++ A Sbjct: 231 KVIDLCAAPGG--KTFNCAEVIDGF--VVACDINEHKLDVLRENILRLGFDNIIVAKSDA 286 Query: 58 KI-KTQDIPDHDVLLAGFPCQPF 79 ++ D+++A PC F Sbjct: 287 EVFNPDFAEKFDIVIADLPCTGF 309 >gi|238810090|dbj|BAH69880.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 416 Score = 40.1 bits (94), Expect = 0.098, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%) Query: 52 IFGDIAKIKTQDIP--DHDVLLAGFPCQPFSQA 82 F DI KI + + D++ FPCQ S A Sbjct: 115 NFNDITKITKEQLDQLHFDLITYSFPCQGLSSA 147 >gi|240102982|ref|YP_002959291.1| Met-10 like-protein, putative SAM-dependent methyltransferase [Thermococcus gammatolerans EJ3] gi|239910536|gb|ACS33427.1| Met-10 like-protein, putative SAM-dependent methyltransferase [Thermococcus gammatolerans EJ3] Length = 331 Score = 40.1 bits (94), Expect = 0.099, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 11/62 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIFGDIA 57 + D+F G+G + L + + F+ ++NP++++ + N I GD+ Sbjct: 185 VFDMFAGVGPYSILLAR-----KAKLVFACDLNPWAIRYLEENIRLNKAHNLVPILGDVR 239 Query: 58 KI 59 K+ Sbjct: 240 KV 241 >gi|283798042|ref|ZP_06347195.1| RNA methyltransferase, RsmD family [Clostridium sp. M62/1] gi|291074344|gb|EFE11708.1| RNA methyltransferase, RsmD family [Clostridium sp. M62/1] gi|295091819|emb|CBK77926.1| RNA methyltransferase, RsmD family [Clostridium cf. saccharolyticum K10] Length = 190 Score = 40.1 bits (94), Expect = 0.099, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 + DLF G GGI +E R E E +P +V+ ++N T + Sbjct: 44 RFLDLFSGSGGI--GIEAL--SRGGELAVFVENSPKAVEVIRSNLKTTHLED 91 >gi|218506488|ref|ZP_03504366.1| C-5 cytosine-specific DNA methylase [Rhizobium etli Brasil 5] Length = 185 Score = 40.1 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 6/61 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60 + + LF G+GG LE + +P ++ ++ P+T D+ ++ Sbjct: 113 MTVV-LFAGMGGGCDGLEDA----GFHVHLAVNHDPLAIAMHEKRHPHTKHLRCDVFEVD 167 Query: 61 T 61 Sbjct: 168 P 168 >gi|261334706|emb|CBH17700.1| proliferator-activated receptor-interacting protein (PRIP) interacting protein (PIMT), putative,pseudogene [Trypanosoma brucei gambiense DAL972] Length = 251 Score = 40.1 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 5/42 (11%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 DLFCG GG + L Q F + +I+P +++ + N Sbjct: 65 LDLFCGCGGDTVQLAQVFEK-----VIAVDIDPDAIEAAKKN 101 >gi|213498016|emb|CAS84143.1| domains rearranged methyltransferase [Nicotiana tomentosiformis] Length = 259 Score = 40.1 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 11/81 (13%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTY--QAN-FPNTLIFGDIA 57 + + LF GIGG + L + N SE+N V+++ Q N N + F D+ Sbjct: 179 INVLSLFSGIGGGEVALYRLGIPLNTVVSVEKSEVNRDIVRSWWEQTNQRGNLIHFNDVQ 238 Query: 58 KIK-------TQDIPDHDVLL 71 ++ + D+++ Sbjct: 239 QLNGDRLEQLIESFGGFDLVI 259 >gi|146085575|ref|XP_001465317.1| hypothetical protein [Leishmania infantum JPCM5] gi|321398858|emb|CBZ08309.1| conserved hypothetical protein [Leishmania infantum JPCM5] gi|322496175|emb|CBZ31246.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 390 Score = 40.1 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 12/85 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 + D+FCGIG L L N + + E NP S+ + N + GD Sbjct: 233 VVDMFCGIGYFTLPLAMHGNVAAIH---ALEKNPDSIDFLKLNAVLNKVDHLIRPVCGDN 289 Query: 57 AKIKTQDIPDHDVLLAG--FPCQPF 79 ++ + + D +L G C+ F Sbjct: 290 REVGEELLGKCDRVLMGYIPTCKSF 314 >gi|322825679|gb|EFZ30569.1| proliferator-activated receptor-interacting protein interacting protein, putative [Trypanosoma cruzi] Length = 250 Score = 40.1 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 5/43 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLFCG GG + L + E + +I+P +++ + N Sbjct: 64 VLDLFCGCGGDTVQLARV-----YEKVVAVDIDPDAIEAAKKN 101 >gi|312793229|ref|YP_004026152.1| sun protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180369|gb|ADQ40539.1| sun protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 410 Score = 40.1 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 10/83 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLIFGDIA 57 K+ DL GG + +IN + + + N F N ++ A Sbjct: 235 KVIDLCAAPGG--KTFNCAEVIDGF--VVACDINEHKLDVLRENILRLGFDNIIVAKSDA 290 Query: 58 KI-KTQDIPDHDVLLAGFPCQPF 79 ++ D+++A PC F Sbjct: 291 EVFNPDFAEKFDIVIADLPCTGF 313 >gi|251778642|ref|ZP_04821562.1| methyl transferase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082957|gb|EES48847.1| methyl transferase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 586 Score = 40.1 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Query: 38 YSVKTYQANFP--NTLIFGDIAKIK-TQDIPDHDVLLAGFPCQPFSQAG 83 + ++Y AN+ + +++ I Q D+ + G PCQ FS G Sbjct: 218 FVKQSYFANYDITDERFHWNVSFIDGAQYTNKVDLFVGGSPCQSFSMVG 266 Score = 37.4 bits (87), Expect = 0.68, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 6/58 (10%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 MLKI +F GIG I L++ E F+S+ V ++ N I DI Sbjct: 1 MLKIATVFSGIGAIEHALKRIGIEH--EIVFASDNGE--VNIFKKNIGTNFI--DIKN 52 >gi|170084587|ref|XP_001873517.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651069|gb|EDR15309.1| predicted protein [Laccaria bicolor S238N-H82] Length = 1273 Score = 40.1 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 34/105 (32%), Gaps = 32/105 (30%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--------- 55 DLF G+G L + + EI P + KT + N P T+++ Sbjct: 750 LDLFGGVGAFSKGL--AEGSECLRVTHAVEIGPSAAKTLERNSPGTIVYNQCANTMLRYA 807 Query: 56 IAKIKTQDIPD-----HD---------------VLLAGFPCQPFS 80 I + PD D V GFPCQ S Sbjct: 808 IKSCEGHK-PDPPVQLFDGKTPVPAPPKPGEIKVFTIGFPCQTHS 851 >gi|308172453|ref|YP_003919158.1| C-5 cytosine-specific DNA methylase [Bacillus amyloliquefaciens DSM 7] gi|307605317|emb|CBI41688.1| C-5 cytosine-specific DNA methylase [Bacillus amyloliquefaciens DSM 7] Length = 458 Score = 40.1 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFGD-IAK 58 I D F G GG +E S +I +P ++ +Q N P+T + + + + Sbjct: 13 IVDNFAGGGGASTGIELATG-------LSVDIAINHDPAAIAMHQVNHPDTEHYCESVWE 65 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQA 82 + ++ + C+ FS+A Sbjct: 66 VDPREAAKGRPIGLAWFSPDCKHFSKA 92 >gi|328910553|gb|AEB62149.1| C-5 cytosine-specific DNA methylase [Bacillus amyloliquefaciens LL3] Length = 458 Score = 40.1 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFGD-IAK 58 I D F G GG +E S +I +P ++ +Q N P+T + + + + Sbjct: 13 IVDNFAGGGGASTGIELATG-------LSVDIAINHDPAAIAMHQVNHPDTEHYCESVWE 65 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQA 82 + ++ + C+ FS+A Sbjct: 66 VDPREAAKGRPIGLAWFSPDCKHFSKA 92 >gi|42766606|gb|AAS45433.1| At5g15380 [Arabidopsis thaliana] Length = 307 Score = 40.1 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 8/69 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55 + + LF GIGG + L + + S EI+ + ++ + T G D Sbjct: 235 INVLSLFTGIGGGEVALHRL--QIKMNVVVSVEISDANRNILRSFWEQTNQKGILREFKD 292 Query: 56 IAKIKTQDI 64 + K+ I Sbjct: 293 VQKLDDNTI 301 >gi|167552502|ref|ZP_02346255.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322882|gb|EDZ10721.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 693 Score = 39.7 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 27/93 (29%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFGD-IAK 58 I D F G GG +E S +I +P +V + N P+TL + + + Sbjct: 6 IVDNFAGGGGASTGIEMAIGR-------SVDIAINHDPNAVAMHTTNHPDTLHYCESVFT 58 Query: 59 IKTQDIPDHDVLLAGFP---------CQPFSQA 82 + + ++ AG P C+ FS+A Sbjct: 59 VNPK------IVTAGRPVALAWYSPDCRHFSKA 85 >gi|326328817|ref|ZP_08195153.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nocardioidaceae bacterium Broad-1] gi|325953439|gb|EGD45443.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nocardioidaceae bacterium Broad-1] Length = 273 Score = 39.7 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKIK 60 K+ DL CG G L +V ++++I+P +V+ +AN ++ GD+ Sbjct: 112 KVLDLCCGTG--ALGAAVAVRRPDVR-MWATDIDPAAVECARANLSSGGQVLLGDLYDPL 168 Query: 61 TQDIPDHDVLLAGFP 75 D+ DV++A P Sbjct: 169 PHDLA-FDVIVANAP 182 >gi|47221238|emb|CAG13174.1| unnamed protein product [Tetraodon nigroviridis] Length = 835 Score = 39.7 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKT-YQANFPNTLIFGDIAK 58 +++ LF GI L +E + +SE+ S+ + + + GD+ Sbjct: 552 IRVLSLFDGI---ATGL-LVLKELGIEVDRYVASEVCEDSITLGFVRHQGRIMYVGDVRG 607 Query: 59 IKTQDIPD---HDVLLAGFPCQPFSQ 81 + + I + D+++ G PC S Sbjct: 608 VTRKHIQEWGPFDLVIGGSPCNDLSI 633 >gi|328852113|gb|EGG01261.1| hypothetical protein MELLADRAFT_79036 [Melampsora larici-populina 98AG31] Length = 2231 Score = 39.7 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 11/62 (17%) Query: 30 FFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----------DIP-DHDVLLAGFPCQP 78 FS EI P+ + NF ++F D+ ++ + +P D D+L+AG C Sbjct: 264 VFSCEIEPFKQAYIERNFQPPILFRDVCELGQEKATTAYGAQVTVPNDVDMLIAGTSCVD 323 Query: 79 FS 80 +S Sbjct: 324 YS 325 >gi|300709256|ref|XP_002996794.1| hypothetical protein NCER_100053 [Nosema ceranae BRL01] gi|239606119|gb|EEQ83123.1| hypothetical protein NCER_100053 [Nosema ceranae BRL01] Length = 196 Score = 39.7 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 9/77 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 +I DL CG G L + N +I+ ++K Y+ N + L DI K Sbjct: 51 RILDLCCGTGM----LSAAVSFFNPSTIVGVDIDYEAIKIYKENL-DHLNNVDIVKADFN 105 Query: 63 DIP----DHDVLLAGFP 75 ++ D ++ P Sbjct: 106 NLEFRSGFFDTVIMNPP 122 >gi|227548104|ref|ZP_03978153.1| possible methyltransferase [Corynebacterium lipophiloflavum DSM 44291] gi|227079830|gb|EEI17793.1| possible methyltransferase [Corynebacterium lipophiloflavum DSM 44291] Length = 194 Score = 39.7 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 9/56 (16%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLIF 53 + DLF G G L LE R E +P +VK + N PN + Sbjct: 46 TVLDLFAGSG--ALGLEAA--SRGASEVVLVENDPRAVKVIEYNASVVGHPNVHVE 97 >gi|222445333|ref|ZP_03607848.1| hypothetical protein METSMIALI_00961 [Methanobrevibacter smithii DSM 2375] gi|261350106|ref|ZP_05975523.1| methyltransferase [Methanobrevibacter smithii DSM 2374] gi|222434898|gb|EEE42063.1| hypothetical protein METSMIALI_00961 [Methanobrevibacter smithii DSM 2375] gi|288860892|gb|EFC93190.1| methyltransferase [Methanobrevibacter smithii DSM 2374] Length = 245 Score = 39.7 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 11/78 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGDI 56 + D+F GIG + H N + +S EINP S + N + GD Sbjct: 99 TVIDMFAGIGYFSIP---IGVHSNAKQVYSIEINPNSFHYLKENIKLNKINNIIPLLGDC 155 Query: 57 AKIKTQDIPDHDVLLAGF 74 I + D ++ G+ Sbjct: 156 MDITPEY--SADRIIMGY 171 >gi|152984997|ref|YP_001347885.1| modification methylase DdeI [Pseudomonas aeruginosa PA7] gi|150960155|gb|ABR82180.1| modification methylase DdeI [Pseudomonas aeruginosa PA7] Length = 518 Score = 39.7 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 30/103 (29%), Gaps = 26/103 (25%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------------FP- 48 K DLF L + + F+ E + + T N +P Sbjct: 75 KFADLFA----GCGGLSLGLSLAGLNGVFAVERDKMAFSTLSTNLIERKDVPITPFAWPS 130 Query: 49 ----NTLIFGDIAKIKTQDIP----DHDVLLAGFPCQPFSQAG 83 DI ++ VL G PCQ FS AG Sbjct: 131 WLEKQAWGIDDILDQHGAELASLRGKIQVLAGGPPCQGFSFAG 173 >gi|163759244|ref|ZP_02166330.1| C-5 cytosine-specific DNA methylase [Hoeflea phototrophica DFL-43] gi|162283648|gb|EDQ33933.1| C-5 cytosine-specific DNA methylase [Hoeflea phototrophica DFL-43] Length = 755 Score = 39.7 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT- 61 I D F G GG +E ++ +P +V + N P+ + ++ ++ Sbjct: 6 IIDCFAGGGGASTGIEMALGRSPD---YAINHDPVAVAMHAVNHPDSVHLCQNVYQVDPL 62 Query: 62 QDIPDHDV--LLAGFPCQPFSQA 82 + C+ FS+A Sbjct: 63 DHFNRAHIGFAWFSPDCKHFSKA 85 >gi|319761948|ref|YP_004125885.1| c-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans BC] gi|317116509|gb|ADU98997.1| C-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans BC] Length = 381 Score = 39.7 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%) Query: 51 LIFGDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83 I+ D+ D ++AGFPCQ S AG Sbjct: 46 PIWSDLLTFDGTAWRGCVDFIIAGFPCQDISIAG 79 >gi|297566490|ref|YP_003685462.1| hypothetical protein Mesil_2082 [Meiothermus silvanus DSM 9946] gi|296850939|gb|ADH63954.1| Protein of unknown function methylase putative [Meiothermus silvanus DSM 9946] Length = 172 Score = 39.7 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 5/44 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DL+ G G I LE E E +P +V+ +AN Sbjct: 45 RFLDLYAGSGAI--GLEAA--SEGFEVVL-VEKDPQAVRILRAN 83 >gi|294776807|ref|ZP_06742270.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus PC510] gi|294449283|gb|EFG17820.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus PC510] Length = 334 Score = 39.4 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 11/18 (61%) Query: 66 DHDVLLAGFPCQPFSQAG 83 D++ G PCQ FS AG Sbjct: 15 KVDLVAGGPPCQGFSMAG 32 >gi|148643096|ref|YP_001273609.1| methyltransferase [Methanobrevibacter smithii ATCC 35061] gi|148552113|gb|ABQ87241.1| predicted methyltransferase [Methanobrevibacter smithii ATCC 35061] Length = 245 Score = 39.4 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 11/78 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGDI 56 + D+F GIG + H N + +S EINP S + N + GD Sbjct: 99 TVIDMFAGIGYFSIP---IGVHSNAKQVYSIEINPNSFHYLKENIKLNKINNIIPLLGDC 155 Query: 57 AKIKTQDIPDHDVLLAGF 74 I + D ++ G+ Sbjct: 156 MDITPEY--SADRIIMGY 171 >gi|323456007|gb|EGB11874.1| hypothetical protein AURANDRAFT_70672 [Aureococcus anophagefferens] Length = 3210 Score = 39.4 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 14/75 (18%) Query: 20 QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----------KTQDIP---- 65 Q + VE FSSE+ P+ Q NF L+F D+ ++ +D+P Sbjct: 326 QHGSPFPVEHIFSSEVEPFKQAYIQRNFAPPLLFRDVRELGNKRAHTAFGALEDVPQDRD 385 Query: 66 DHDVLLAGFPCQPFS 80 DVL+AG C +S Sbjct: 386 HFDVLIAGTSCVDYS 400 >gi|323446127|gb|EGB02416.1| hypothetical protein AURANDRAFT_68904 [Aureococcus anophagefferens] Length = 336 Score = 39.4 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 13/65 (20%) Query: 21 TFNHRNVECFFSSEINP---YSVKTYQANFPNTLIFGDIAKIKTQ------DIPDHDVLL 71 F++ ++ E+ ++ +T FP+ DI K+ +I + D+L+ Sbjct: 149 GFSNMPIKIVSFIEVGKNFEHAKET----FPDAQALNDIRKVNEDIEQDKLNIVEFDLLV 204 Query: 72 AGFPC 76 FPC Sbjct: 205 CSFPC 209 >gi|329888667|ref|ZP_08267265.1| putative DNA methylase [Brevundimonas diminuta ATCC 11568] gi|328847223|gb|EGF96785.1| putative DNA methylase [Brevundimonas diminuta ATCC 11568] Length = 237 Score = 39.4 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 13/83 (15%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNH-RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 M++I DL+ GG + H +I P Y + D+ I Sbjct: 1 MIRIADLYSCAGGAGYGFKLAGAHVTGF------DIKPQPR--YA---GDAFEQRDVLAI 49 Query: 60 KTQDIPD-HDVLLAGFPCQPFSQ 81 +++ + D + A CQ ++ Sbjct: 50 SAEELRERFDFIHASPKCQGLTE 72 >gi|109946968|ref|YP_664196.1| DNA-cytosine methyltransferase [Helicobacter acinonychis str. Sheeba] gi|109714189|emb|CAJ99197.1| DNA-cytosine methyltransferase [Helicobacter acinonychis str. Sheeba] Length = 377 Score = 39.4 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 11/18 (61%) Query: 66 DHDVLLAGFPCQPFSQAG 83 DV+ G PCQ +S AG Sbjct: 69 KIDVIFGGPPCQAYSLAG 86 >gi|310792779|gb|EFQ28240.1| hypothetical protein GLRG_03384 [Glomerella graminicola M1.001] Length = 1078 Score = 39.4 bits (92), Expect = 0.16, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 24/103 (23%) Query: 2 LKITDLFCGIGGIRLD---LEQTFNHRNV------ECFFSSEINPYSVKTYQANFPNT-L 51 +I + G G L + R + FS EI+P+ + N P + Sbjct: 324 FRIATMCSGTDGPILALREFAEAATGRGYLGVLRYDHVFSVEIDPFKQAFIERNSPPSGP 383 Query: 52 IFGDIAKI-------------KTQDIP-DHDVLLAGFPCQPFS 80 IF ++ + DIP D D+L+AG C FS Sbjct: 384 IFRNVIDVGRPGAVQAMTASGAMADIPTDIDILVAGSSCVDFS 426 >gi|307106877|gb|EFN55121.1| expressed protein [Chlorella variabilis] Length = 1195 Score = 39.4 bits (92), Expect = 0.16, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%) Query: 41 KTYQANFPNTLIFGDIAKIKTQDIPD-HDVLLAGFPCQPFSQAG 83 + +++FP I D+ I + +P+ ++L+AGFPC S+AG Sbjct: 32 QVLRSSFPGVRIHDDV--ISLERLPEETELLVAGFPCIDVSRAG 73 >gi|254169095|ref|ZP_04875932.1| Met-10+ like-protein [Aciduliprofundum boonei T469] gi|197621934|gb|EDY34512.1| Met-10+ like-protein [Aciduliprofundum boonei T469] Length = 346 Score = 39.4 bits (92), Expect = 0.16, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 11/77 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGDIA 57 I DLF GIG L L + V+ ++ E NP + + N +FGD Sbjct: 196 IVDLFAGIGYFTLPLAKYGR---VKKIYACEKNPIAYRYLLENIELNQLENIIPLFGDNR 252 Query: 58 KIKTQDIPDHDVLLAGF 74 I I D ++ G+ Sbjct: 253 NISPLKI--ADRVIMGY 267 >gi|189016742|ref|YP_001711781.1| putative DNA modification methylase [Clavibacter michiganensis subsp. sepedonicus] gi|167728913|emb|CAQ03295.1| putative DNA modification methylase [Clavibacter michiganensis subsp. sepedonicus] Length = 544 Score = 39.4 bits (92), Expect = 0.16, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 37 PYSVKTYQANFPNT-LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 +++T+ N P+T D++++ + P +L C SQA Sbjct: 9 KLAIETHNTNHPDTDHDIADLSQVDPRRYPRTKILWGSPECTSHSQA 55 >gi|145604116|ref|XP_360423.2| hypothetical protein [Magnaporthe oryzae 70-15] gi|145012186|gb|EDJ96842.1| predicted protein [Magnaporthe oryzae 70-15] Length = 326 Score = 39.4 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 20 QTFNHRNVECFFSSEINPYSVKTYQA------NFPNTLIFGDIAKIKTQDIPDHDVLLAG 73 + ++C ++++ + + Y+ NF + F ++ K ++IP +VL G Sbjct: 1 MALSELGLKCVYANDNSELAASIYEKNHTMEQNFVDKRDFSEVVKHHLKEIPRANVLSVG 60 >gi|300024520|ref|YP_003757131.1| C-5 cytosine-specific DNA methylase [Hyphomicrobium denitrificans ATCC 51888] gi|299526341|gb|ADJ24810.1| C-5 cytosine-specific DNA methylase [Hyphomicrobium denitrificans ATCC 51888] Length = 548 Score = 39.4 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 11/85 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK--TYQANFPNTLIF-GDIAKIK 60 I D F G GG L +E + + IN ++ + N P+T D+ + Sbjct: 6 IIDNFAGGGGASLGVEMAC-WKGPDIA----INHDAIALGLHATNHPHTEHHVEDVWAVD 60 Query: 61 TQDI---PDHDVLLAGFPCQPFSQA 82 + + + C+ FS+A Sbjct: 61 PRAVTKGRPVSLAWFSPDCKHFSKA 85 >gi|237731131|ref|ZP_04561612.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226906670|gb|EEH92588.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 665 Score = 39.4 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG----D 55 I D F G GG +E S +I + ++ ++ N P+TL + D Sbjct: 5 IVDNFAGGGGASTGIELAIGR-------SVDIAINHDENAIAMHKTNHPDTLHYCESVFD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 + + + C+ FS+A Sbjct: 58 VDPVAATGGNPVGLAWFSPDCRHFSKA 84 >gi|251795624|ref|YP_003010355.1| C-5 cytosine-specific DNA methylase [Paenibacillus sp. JDR-2] gi|247543250|gb|ACT00269.1| C-5 cytosine-specific DNA methylase [Paenibacillus sp. JDR-2] Length = 558 Score = 39.4 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIKTQ 62 I D F G GG +E + +P ++ ++AN P+T + + + + + Sbjct: 9 IVDNFAGGGGASTGIELAIGRS---VDVAINHDPAAIAMHKANHPDTEHYCESVWDVDPR 65 Query: 63 DIP---DHDVLLAGFPCQPFSQA 82 + + C+ FS+A Sbjct: 66 QVARGQQVALCWLSPDCKHFSKA 88 >gi|71409126|ref|XP_806926.1| proliferator-activated receptor-interacting protein (PRIP) interacting protein (PIMT) [Trypanosoma gi|70870807|gb|EAN85075.1| proliferator-activated receptor-interacting protein (PRIP) interacting protein (PIMT), putative [Trypanosoma cruzi] Length = 200 Score = 39.4 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 5/43 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLFCG GG + L + E + +I+P +++ + N Sbjct: 64 VLDLFCGCGGDTVQLARV-----YEKVVAVDIDPDAIEAAKKN 101 >gi|320040035|gb|EFW21969.1| RNA methylase [Coccidioides posadasii str. Silveira] Length = 240 Score = 39.4 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 13/82 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFGD- 55 + D F G+GG + ++ R ++ E +P S++ + N T GD Sbjct: 77 VIDTFAGVGGNAIAFARSNKWRR---VYAIEKDPASLQCAKHNAKIYGVEDKITWFQGDC 133 Query: 56 --IAKIKTQDIPDHDVLLAGFP 75 I K + +D+ + V+ A P Sbjct: 134 FEILKTQLKDLAPYSVIFASPP 155 >gi|303312089|ref|XP_003066056.1| trimethylguanosine synthase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240105718|gb|EER23911.1| trimethylguanosine synthase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 240 Score = 39.4 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 13/82 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFGD- 55 + D F G+GG + ++ R ++ E +P S++ + N T GD Sbjct: 77 VIDTFAGVGGNAIAFARSNKWRR---VYAIEKDPASLQCAKHNAKIYGVEDKITWFQGDC 133 Query: 56 --IAKIKTQDIPDHDVLLAGFP 75 I K + +D+ + V+ A P Sbjct: 134 FEILKTQLKDLAPYSVIFASPP 155 >gi|196047975|ref|ZP_03115153.1| C-5 cytosine-specific DNA methylase [Bacillus cereus 03BB108] gi|196021231|gb|EDX59960.1| C-5 cytosine-specific DNA methylase [Bacillus cereus 03BB108] Length = 471 Score = 39.4 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFGD-IAK 58 I D F G GG +E +I +P ++ ++ N P+T + + + + Sbjct: 10 IVDSFAGGGGASTGIELATGLP-------VDIAINHDPDAIAMHKVNHPDTEHYCESVWE 62 Query: 59 IKTQDI---PDHDVLLAGFPCQPFSQA 82 + + + C+ FS+A Sbjct: 63 VDPRKAVKGRKVALCWFSPDCKHFSKA 89 >gi|254168253|ref|ZP_04875099.1| Met-10+ like-protein [Aciduliprofundum boonei T469] gi|197622762|gb|EDY35331.1| Met-10+ like-protein [Aciduliprofundum boonei T469] Length = 311 Score = 39.4 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 12/76 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------PNTLIFGDI 56 I D+F G G + ++ V+ ++ +INPY+++ + N T I GD Sbjct: 164 TIFDMFAGCGPFSI---LIAKYKKVKI-YACDINPYAIEYLEENIKINKVEGITPILGDA 219 Query: 57 AKIKTQDIPDHDVLLA 72 + ++I D ++ Sbjct: 220 RDV-AKEI-KADRIIM 233 >gi|18071217|ref|NP_542311.1| hypothetical protein PBC5p51 [Sinorhizobium phage PBC5] gi|17940323|gb|AAL49567.1|AF448724_4 unknown [Sinorhizobium phage PBC5] Length = 751 Score = 39.0 bits (91), Expect = 0.20, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 33/105 (31%) Query: 7 LFCGIGGIRLDLEQTFNHRN-----VECFFSSEINPYSVK-------------------T 42 LFCG+G + C + +P +++ Sbjct: 17 LFCGLGAGAKGFNKGSARVGSLNAKFRCIGGIDNDPAAIRDFTRLAGVPGTLLDLFDLEQ 76 Query: 43 YQANFPNTL-------IFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80 Y+A + DI + + P D++ PC+ FS Sbjct: 77 YRAFHSRDPDPDWQQAVPDDIRRAAHGEFP--DIVFLSAPCKGFS 119 >gi|326922768|ref|XP_003207617.1| PREDICTED: methyltransferase-like protein 5-like isoform 2 [Meleagris gallopavo] Length = 229 Score = 39.0 bits (91), Expect = 0.20, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 31/79 (39%), Gaps = 10/79 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKT 61 + DL CG G + + + C +I+ +++ + +N + + D+ + Sbjct: 54 TVADLGCGCGMLSIG--SAMLGAGL-CVGF-DIDAEALEIFNSNLEDFELTNVDVVQCDV 109 Query: 62 QDIPD-----HDVLLAGFP 75 +PD D ++ P Sbjct: 110 SSLPDSMSETFDTVIMNPP 128 >gi|297243817|ref|ZP_06927747.1| methylase of polypeptide chain release factors [Gardnerella vaginalis AMD] gi|296888238|gb|EFH26980.1| methylase of polypeptide chain release factors [Gardnerella vaginalis AMD] Length = 332 Score = 39.0 bits (91), Expect = 0.20, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 18/85 (21%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------- 49 + DL G G I L + + ++ E +P + + + NF Sbjct: 122 TVVDLCAGSGAI--GLSIATEVADAQ-VWAVEKSPEAFQYLRKNFEETAKNYENMQISSR 178 Query: 50 -TLIFGDIAKIKTQDI-PDHDVLLA 72 + D K D+ P+ + Sbjct: 179 YHAVLADATKAHISDLTPELHAICG 203 >gi|242051741|ref|XP_002455016.1| hypothetical protein SORBIDRAFT_03g003010 [Sorghum bicolor] gi|241926991|gb|EES00136.1| hypothetical protein SORBIDRAFT_03g003010 [Sorghum bicolor] Length = 558 Score = 39.0 bits (91), Expect = 0.21, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 10/75 (13%) Query: 4 ITDLFCGIG--GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-FPN-TLIFGDIAKI 59 + DLFCG G G+ L + + E E + K + N N T + GD+ KI Sbjct: 407 VLDLFCGTGTIGLTLA-RRAKHVYGYEVV--PEAIADARKNAKLNGIDNATFVQGDLNKI 463 Query: 60 KT---QDIPDHDVLL 71 ++ P D+++ Sbjct: 464 NESFGKEFPKPDIII 478 >gi|18977199|ref|NP_578556.1| putative RNA methyltransferase [Pyrococcus furiosus DSM 3638] gi|50401623|sp|Q8U2K7|Y827_PYRFU RecName: Full=Uncharacterized RNA methyltransferase PF0827 gi|18892856|gb|AAL80951.1| putative RNA methyltransferase [Pyrococcus furiosus DSM 3638] Length = 409 Score = 39.0 bits (91), Expect = 0.21, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT 42 K+ DL+ GIG L L + + EIN +V+ Sbjct: 272 KVLDLYSGIGTFSLYLTK----KGFNVVG-VEINKTAVEV 306 >gi|307110413|gb|EFN58649.1| hypothetical protein CHLNCDRAFT_50474 [Chlorella variabilis] Length = 1332 Score = 39.0 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 4/43 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + D+F G G + L ++ + F E + + Y N Sbjct: 557 MVDVFGGAGCVSLGFKKA----GFQWVFGVEQDKDAFTAYSRN 595 >gi|225155383|ref|ZP_03723875.1| C-5 cytosine-specific DNA methylase [Opitutaceae bacterium TAV2] gi|224803839|gb|EEG22070.1| C-5 cytosine-specific DNA methylase [Opitutaceae bacterium TAV2] Length = 287 Score = 39.0 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQA-NFPNTLIFGD-----IAKIKTQDIPDHD---------------- 68 + +EI+P + + N + GD I ++ DI + Sbjct: 3 YYNEIDPKAATWLRELIRQNLIPAGDVDERSITEVSPYDIDGYTQCHFFAGVGGWPLASQ 62 Query: 69 ---------VLLAGFPCQPFSQAG 83 V PCQPFS AG Sbjct: 63 LAGWPTTRPVWTGSCPCQPFSVAG 86 >gi|312127904|ref|YP_003992778.1| sun protein [Caldicellulosiruptor hydrothermalis 108] gi|311777923|gb|ADQ07409.1| sun protein [Caldicellulosiruptor hydrothermalis 108] Length = 410 Score = 39.0 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 10/83 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLIFGDIA 57 K+ DL GG + +IN + + + N F N ++ A Sbjct: 235 KVIDLCAAPGG--KTFNCAEVIDGF--VVACDINEHKLDILRENILRLGFDNIIVAKSDA 290 Query: 58 KI-KTQDIPDHDVLLAGFPCQPF 79 ++ D+++A PC F Sbjct: 291 EVFNPDFAEKFDIVIADLPCTGF 313 >gi|254168426|ref|ZP_04875271.1| Met-10+ like-protein [Aciduliprofundum boonei T469] gi|289595799|ref|YP_003482495.1| protein of unknown function Met10 [Aciduliprofundum boonei T469] gi|197622707|gb|EDY35277.1| Met-10+ like-protein [Aciduliprofundum boonei T469] gi|289533586|gb|ADD07933.1| protein of unknown function Met10 [Aciduliprofundum boonei T469] Length = 311 Score = 39.0 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 12/76 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------PNTLIFGDI 56 I D+F G G + ++ V+ ++ +INPY+++ + N T I GD Sbjct: 164 TIFDMFAGCGPFSI---LIAKYKKVK-IYACDINPYAIEYLEENIKMNKVKGITPILGDA 219 Query: 57 AKIKTQDIPDHDVLLA 72 + ++I D ++ Sbjct: 220 RDV-AKEI-KADRIIM 233 >gi|224982996|gb|ACN73414.1| c-5 cytosine specific DNA methylase [Acinetobacter sp. NFM2] Length = 441 Score = 39.0 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIKTQ 62 I D F G GG LE+ F R ++ + +P ++ ++ N P T + + + + Sbjct: 10 IVDNFAGGGGTSTGLERAFG-RPIDI--AINHDPKALAMHRVNHPLTKHYCESVWDVDPV 66 Query: 63 DIP---DHDVLLAGFPCQPFSQA 82 +I ++ C+ S+A Sbjct: 67 EITGNQPVGLVWLSPDCKHHSKA 89 >gi|15828514|ref|NP_325874.1| CpG DNA methylase (cytosine-specific methyltransferase) [Mycoplasma pulmonis UAB CTIP] gi|14089456|emb|CAC13216.1| CPG DNA METHYLASE (CYTOSINE-SPECIFIC METHYLTRANSFERASE) [Mycoplasma pulmonis] Length = 296 Score = 39.0 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%) Query: 52 IFGDIAKIKTQDIP-DHDVLLAGFPCQPFS 80 F DI K+ + IP D D+ FPCQ S Sbjct: 18 NFSDITKLNS--IPKDIDIFTYSFPCQDIS 45 >gi|153810847|ref|ZP_01963515.1| hypothetical protein RUMOBE_01231 [Ruminococcus obeum ATCC 29174] gi|149833243|gb|EDM88325.1| hypothetical protein RUMOBE_01231 [Ruminococcus obeum ATCC 29174] Length = 184 Score = 39.0 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF G GGI +E R E E NP + + N Sbjct: 44 RFLDLFSGSGGI--GIEAL--SRGAESAVFVEKNPKACACIREN 83 >gi|85706642|ref|ZP_01037734.1| modification methylase (Cytosine-specific methyltransferase [Roseovarius sp. 217] gi|85668700|gb|EAQ23569.1| modification methylase (Cytosine-specific methyltransferase [Roseovarius sp. 217] Length = 511 Score = 39.0 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 35/133 (26%), Gaps = 53/133 (39%) Query: 4 ITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKT---------YQANFP---- 48 I DLF G GG+ H S E + +T YQA Sbjct: 7 IVDLFAGPGGLGEGFASLVEDGHAPFRIGISVEKEASAHRTLALRAFLREYQALHGVLPE 66 Query: 49 -------NTLIFGDIAKIKTQDI-----------------------------PDHD--VL 70 + D + + + ++D +L Sbjct: 67 PFIDFHAGLVPEPDWSAVDAEAWQLAIDEARALELGTETAARAIDGAIAKLRKNYDDTIL 126 Query: 71 LAGFPCQPFSQAG 83 + G PCQ +S G Sbjct: 127 IGGPPCQAYSLVG 139 >gi|269961512|ref|ZP_06175875.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833741|gb|EEZ87837.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 199 Score = 39.0 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 5/62 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF G GG L E E E+NP + + Q N +L +I + T Sbjct: 62 KCLDLFAGSGG--LGFESASRQA--ELVTMIELNPQAFQQLQKN-VTSLNANNIHVVNTD 116 Query: 63 DI 64 I Sbjct: 117 AI 118 >gi|149882798|ref|YP_001294777.1| probable DNA methylase [Microbacterium phage Min1] gi|148763429|gb|ABR10447.1| probable DNA methylase [Microbacterium phage Min1] Length = 317 Score = 39.0 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 15/84 (17%) Query: 5 TDLFCGIG-GIRLDLEQTFNHRNVECFFSSEINP-YSV-KTYQANFPNTLIFGDIAK--I 59 D F G+G G + + + + + ++V +T AN I+ D+ Sbjct: 8 VDHFAGVGWGF------ACHTLGIREYGA---DTAHAVIRTRSAN-GMRTIYRDVWSGLF 57 Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83 +P H + +A PCQ FS AG Sbjct: 58 DPSLVPAHRLYIASPPCQTFSMAG 81 >gi|170718850|ref|YP_001784027.1| C5 methylase (MAV1virus-like) [Haemophilus somnus 2336] gi|168826979|gb|ACA32350.1| putative C5 methylase (MAV1virus-like) [Haemophilus somnus 2336] Length = 252 Score = 39.0 bits (91), Expect = 0.24, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Query: 52 IFGDIAKIKT-QDIPDHDVLLAGFPCQPFSQA 82 +FGD +P DV+LA PC+ FS A Sbjct: 56 LFGDNTLFNQLDSLPKPDVILASPPCESFSVA 87 >gi|118093593|ref|XP_001233695.1| PREDICTED: similar to DC3 [Gallus gallus] Length = 212 Score = 39.0 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 31/79 (39%), Gaps = 10/79 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKT 61 + DL CG G + + + C +I+ +++ + +N + + D+ + Sbjct: 54 TVADLGCGCGMLSIG--SAMLGAGL-CVGF-DIDAEALEIFNSNLEDFELTNVDVVQCDV 109 Query: 62 QDIPD-----HDVLLAGFP 75 +PD D ++ P Sbjct: 110 SSLPDSMSETFDTVIMNPP 128 >gi|302536303|ref|ZP_07288645.1| conserved hypothetical protein [Streptomyces sp. C] gi|302445198|gb|EFL17014.1| conserved hypothetical protein [Streptomyces sp. C] Length = 425 Score = 38.6 bits (90), Expect = 0.26, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 6/66 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DL CGIGG L L + + +++P +V +AN L D+ +++ D Sbjct: 133 VADLCCGIGGDALALARRGIR-----VLAVDLDPLTVAVARAN-AEALGLADLIEVREAD 186 Query: 64 IPDHDV 69 + DV Sbjct: 187 VTAVDV 192 >gi|255079756|ref|XP_002503458.1| predicted protein [Micromonas sp. RCC299] gi|226518725|gb|ACO64716.1| predicted protein [Micromonas sp. RCC299] Length = 716 Score = 38.6 bits (90), Expect = 0.26, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 5/38 (13%) Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ 44 LF GIGGI L L++ + EI+ + V+ + Sbjct: 634 LFTGIGGIELSLKRWIHW-----IMYCEIDTFCVEVLK 666 >gi|326922766|ref|XP_003207616.1| PREDICTED: methyltransferase-like protein 5-like isoform 1 [Meleagris gallopavo] Length = 212 Score = 38.6 bits (90), Expect = 0.26, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 31/79 (39%), Gaps = 10/79 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKT 61 + DL CG G + + + C +I+ +++ + +N + + D+ + Sbjct: 54 TVADLGCGCGMLSIG--SAMLGAGL-CVGF-DIDAEALEIFNSNLEDFELTNVDVVQCDV 109 Query: 62 QDIPD-----HDVLLAGFP 75 +PD D ++ P Sbjct: 110 SSLPDSMSETFDTVIMNPP 128 >gi|157878942|ref|XP_001687302.1| hypothetical protein [Leishmania major strain Friedlin] gi|321438217|emb|CBZ11969.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 390 Score = 38.6 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 12/85 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 + D+FCGIG L L N + + E NP S+ + N + GD Sbjct: 233 VVDMFCGIGYFTLPLAMHGNVAAIH---ALEKNPDSIDFVKLNAVLNKVDHLIHPVCGDN 289 Query: 57 AKIKTQDIPDHDVLLAG--FPCQPF 79 ++ + + D +L G C+ F Sbjct: 290 REVGEELLGKCDRVLMGYIPTCKSF 314 >gi|312136621|ref|YP_004003958.1| methyltransferase [Methanothermus fervidus DSM 2088] gi|311224340|gb|ADP77196.1| methyltransferase [Methanothermus fervidus DSM 2088] Length = 240 Score = 38.6 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 12/79 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGD 55 + D+F GIG + + H + F+ EINP + K + N I GD Sbjct: 93 TVVDMFAGIGYFSIPI---AVHSQPKKVFAIEINPTAFKYLKENIKLNKVEKKVFPILGD 149 Query: 56 IAKIKTQDIPDHDVLLAGF 74 KI + D D ++ G+ Sbjct: 150 CGKIAPE--LDADRVIMGY 166 >gi|206579103|ref|YP_002239989.1| C-5 cytosine-specific DNA methylase [Klebsiella pneumoniae 342] gi|206568161|gb|ACI09937.1| C-5 cytosine-specific DNA methylase [Klebsiella pneumoniae 342] Length = 390 Score = 38.6 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 24/84 (28%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIPDHD---------------- 68 + +EI+P++ + + P + I + D+ Sbjct: 6 YYNEIDPFAAQWLRNLIAAGHIAPGEVDERSIEDVTPDDLRGFTQCHFFAGIGGWSYALR 65 Query: 69 ---------VLLAGFPCQPFSQAG 83 + PCQPFS G Sbjct: 66 LAGWPDNRPIWTGSCPCQPFSSTG 89 >gi|331004263|ref|ZP_08327741.1| RsmD family RNA methyltransferase [Lachnospiraceae oral taxon 107 str. F0167] gi|330411428|gb|EGG90840.1| RsmD family RNA methyltransferase [Lachnospiraceae oral taxon 107 str. F0167] Length = 184 Score = 38.6 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 4/49 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI 52 DLF G GGI +E R + +I+ +++ + N +T + Sbjct: 45 FLDLFAGSGGI--GIEAL--SRGAREAYFCDIDREAIQCIRQNLEHTKL 89 >gi|317157659|ref|XP_001826363.2| C-5 cytosine-specific DNA methylase [Aspergillus oryzae RIB40] Length = 2165 Score = 38.6 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 11/65 (16%) Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT----------QDIP-DHDVLLAGFP 75 FS+EI PY + NF L+F D+ ++K + +P + D+L+AGF Sbjct: 139 FRHLFSAEIVPYKQRYIDNNFHPRLLFRDVTQLKDRVAQTAYGSLEKVPRNPDMLIAGFS 198 Query: 76 CQPFS 80 C FS Sbjct: 199 CVDFS 203 >gi|227504424|ref|ZP_03934473.1| possible methyltransferase [Corynebacterium striatum ATCC 6940] gi|227199072|gb|EEI79120.1| possible methyltransferase [Corynebacterium striatum ATCC 6940] Length = 200 Score = 38.6 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 ++ DLF G G L LE R E E +P +VK Q N Sbjct: 46 RVLDLFAGSG--ALGLEAA--SRGAEEVVLVESSPAAVKVIQHN 85 >gi|119193420|ref|XP_001247316.1| hypothetical protein CIMG_01087 [Coccidioides immitis RS] Length = 240 Score = 38.6 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 13/82 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFGD- 55 + D F G+GG + ++ R ++ E NP S++ + N T GD Sbjct: 77 VIDTFAGVGGNAIAFARSNKWRR---VYAIEKNPASLQCAKHNAKIYGVEDKITWFQGDC 133 Query: 56 --IAKIKTQDIPDHDVLLAGFP 75 I K + +D+ + V+ A P Sbjct: 134 FEILKTQLKDLAPYSVIFASPP 155 >gi|144575112|gb|AAZ43851.2| putative cytosine-specific methyltransferase [Mycoplasma synoviae 53] Length = 416 Score = 38.6 bits (90), Expect = 0.28, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%) Query: 52 IFGDIAKIKTQDI--PDHDVLLAGFPCQPFSQA 82 + DI K+ Q + D+L FPCQ S A Sbjct: 115 NYCDIKKVDGQILDENKIDLLTYSFPCQGLSVA 147 >gi|168023511|ref|XP_001764281.1| predicted protein [Physcomitrella patens subsp. patens] gi|162684433|gb|EDQ70835.1| predicted protein [Physcomitrella patens subsp. patens] Length = 457 Score = 38.6 bits (90), Expect = 0.28, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 12/82 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA---------NFPNTLIF 53 ++ +L+ G+G I L L T R V+C E+N + ++ N + Sbjct: 240 RVVELYAGVGAIGLSLAATRKCRVVKCV---EVNKEAKPVFERSLTRLPPSVNAEISWHC 296 Query: 54 GDIAKIKTQDIPDHDVLLAGFP 75 D++ + DV++ P Sbjct: 297 ADVSVSPINWLEGSDVVIVDPP 318 >gi|187940130|gb|ACD39262.1| methyltransferase protein [Pseudomonas aeruginosa] Length = 253 Score = 38.6 bits (90), Expect = 0.28, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIP------------------- 65 + +E +PY+ + + P + I + D+ Sbjct: 5 YYNEFDPYAAQWLRNLIAAGHIAPGDVDERSIEDVHPDDLKHYTQCHFFAGIGVWSLALR 64 Query: 66 ------DHDVLLAGFPCQPFSQAG 83 D V PCQP+S+AG Sbjct: 65 RSGWPDDRPVWTGSCPCQPYSKAG 88 >gi|84489817|ref|YP_448049.1| methyltransferase [Methanosphaera stadtmanae DSM 3091] gi|84373136|gb|ABC57406.1| predicted methyltransferase [Methanosphaera stadtmanae DSM 3091] Length = 340 Score = 38.6 bits (90), Expect = 0.28, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 11/63 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDI 56 I D F GIG + + +N + +S +INP + K Q N I GDI Sbjct: 197 IIDFFAGIGSFPI---SIAHRKNAK-IYSVDINPEAYKYVQENIKLNKLVGTVIPIEGDI 252 Query: 57 AKI 59 K+ Sbjct: 253 RKV 255 >gi|56479059|ref|YP_160648.1| modification methylase (cytosine-specific methyltransferase [Aromatoleum aromaticum EbN1] gi|56315102|emb|CAI09747.1| Modification methylase (Cytosine-specific methyltransferase [Aromatoleum aromaticum EbN1] Length = 538 Score = 38.6 bits (90), Expect = 0.30, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ 44 ++KI DLF G GG+ H + + S+E+ + T + Sbjct: 15 IIKIVDLFAGPGGLGEGFSS---HSSFQIAVSAEMESSAHATLR 55 Score = 35.1 bits (81), Expect = 3.3, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 10/15 (66%) Query: 69 VLLAGFPCQPFSQAG 83 VL+ G PCQ +S G Sbjct: 139 VLIGGPPCQAYSLVG 153 >gi|126653150|ref|ZP_01725274.1| type II DNA modification methyltransferase Spn5252IP [Bacillus sp. B14905] gi|126590066|gb|EAZ84192.1| type II DNA modification methyltransferase Spn5252IP [Bacillus sp. B14905] Length = 48 Score = 38.6 bits (90), Expect = 0.30, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 11/18 (61%) Query: 66 DHDVLLAGFPCQPFSQAG 83 D + GFPCQ FS AG Sbjct: 20 KVDNICGGFPCQAFSVAG 37 >gi|319764257|ref|YP_004128194.1| c-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans BC] gi|317118818|gb|ADV01307.1| C-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans BC] Length = 686 Score = 38.6 bits (90), Expect = 0.31, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 32/94 (34%), Gaps = 29/94 (30%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFGDIAKI 59 I D F G GG LE+ F +I +P ++ + N P TL Sbjct: 17 IIDNFAGGGGTSTGLEKAFGRP-------VDIAINHDPEALAMHAINHPRTLHLC----- 64 Query: 60 KTQDIPDHD-----------VLLAGFPCQPFSQA 82 + + D ++ C+ FS+A Sbjct: 65 --ESVWSVDPIRVTRNQPVALVWLSPDCKHFSKA 96 >gi|325681464|ref|ZP_08160990.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcus albus 8] gi|324106954|gb|EGC01244.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcus albus 8] Length = 292 Score = 38.6 bits (90), Expect = 0.31, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 9/78 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPN-TLIFGDIAK 58 + DL G G I L LE+ H ++ E + + N L+ GD+ Sbjct: 119 VADLCSGSGCIALALEK---HLKCREVWAVEKSEAAAGYLKDNLALNHSAVKLVMGDVLD 175 Query: 59 IKT-QDIPDHDVLLAGFP 75 T IP D+++ P Sbjct: 176 SDTANKIPAADLIVCNPP 193 >gi|154312053|ref|XP_001555355.1| hypothetical protein BC1G_06060 [Botryotinia fuckeliana B05.10] gi|150850710|gb|EDN25903.1| hypothetical protein BC1G_06060 [Botryotinia fuckeliana B05.10] Length = 1152 Score = 38.6 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 11/35 (31%) Query: 48 PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 P GDI D+++ G PCQ +S+A Sbjct: 682 PKMPAKGDI-----------DMIVGGPPCQGWSRA 705 >gi|154331559|ref|XP_001561597.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134058916|emb|CAM36743.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 390 Score = 38.6 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 12/85 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 + D+FCGIG L L N + + E NP S+ + N + GD Sbjct: 233 VVDMFCGIGYFALPLAMHGNVAEIH---ALEKNPDSIDFVKLNAVLNRVGHLIHPVCGDN 289 Query: 57 AKIKTQDIPDHDVLLAG--FPCQPF 79 ++ + + D +L G C+ F Sbjct: 290 REVGEELVGKCDRVLMGYIPTCKSF 314 >gi|24374531|ref|NP_718574.1| prophage LambdaSo, type II DNA modification methyltransferase, putative [Shewanella oneidensis MR-1] gi|24349120|gb|AAN56018.1|AE015737_16 prophage LambdaSo, type II DNA modification methyltransferase, putative [Shewanella oneidensis MR-1] Length = 557 Score = 38.6 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG----D 55 I D F G GG + S +I + ++ + AN P TL + D Sbjct: 5 IVDNFAGGGGASTGMAWALGR-------SVDIAINHDQDAIAMHSANHPETLHYCESVFD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 + ++ + C+ FS+A Sbjct: 58 VDPVQATAGKPVALAWFSPDCKHFSKA 84 >gi|312622710|ref|YP_004024323.1| sun protein [Caldicellulosiruptor kronotskyensis 2002] gi|312203177|gb|ADQ46504.1| sun protein [Caldicellulosiruptor kronotskyensis 2002] Length = 431 Score = 38.6 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 10/83 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLIFGDIA 57 K+ DL GG + +IN + + + N F N ++ + A Sbjct: 256 KVLDLCAAPGG--KTFNCAEVIDGF--VVACDINEHKLDILRENILRLGFDNIIVAKNDA 311 Query: 58 KI-KTQDIPDHDVLLAGFPCQPF 79 ++ D+++A PC F Sbjct: 312 EVFNPDFAEKFDIVIADLPCTGF 334 >gi|282849500|ref|ZP_06258884.1| conserved domain protein [Veillonella parvula ATCC 17745] gi|282580437|gb|EFB85836.1| conserved domain protein [Veillonella parvula ATCC 17745] Length = 95 Score = 38.6 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 29/86 (33%), Gaps = 18/86 (20%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---DIAK 58 I + F G GG + Q N + ++ +KT N PN + G D Sbjct: 7 YTIFETFVGAGGSHIGFMQ----ENFRTVYVNDFIDDCLKTLVYNNPNLIEEGAYIDNTS 62 Query: 59 IKTQD-----------IPDHDVLLAG 73 I D I + DV L G Sbjct: 63 IDKIDAVALRNKLGVTIGEIDVFLGG 88 >gi|325118579|emb|CBZ54130.1| putative DNA methyltransferase 2 [Neospora caninum Liverpool] Length = 794 Score = 38.2 bits (89), Expect = 0.33, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 17/65 (26%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVEC---FFSS------------EINPYSVKTYQANFP 48 + + F GIGG+ ++ C F+S ++N + + Y NF Sbjct: 65 VFEFFSGIGGLHAGWDRAVEI--FNCASSAFASAVVLQAPVCRAYDVNATANQVYVHNFG 122 Query: 49 NTLIF 53 + Sbjct: 123 LSPQH 127 >gi|213498012|emb|CAS84141.1| DNA (cytosine-5) methyltransferase [Nicotiana tomentosiformis] Length = 395 Score = 38.2 bits (89), Expect = 0.34, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 32/102 (31%), Gaps = 37/102 (36%) Query: 13 GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF---------------GD-- 55 G+ L+++ + ++ E + ++ N P +F GD Sbjct: 1 GLSEGLQRSGVS---DTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVILRAVMQKCGDAE 57 Query: 56 --IAKIKTQDIP---------------DHDVLLAGFPCQPFS 80 I+ + ++ D + G PCQ FS Sbjct: 58 DCISTSEASELAAAMDENELNSLPLPGQVDFINGGPPCQGFS 99 >gi|322832506|ref|YP_004212533.1| C-5 cytosine-specific DNA methylase [Rahnella sp. Y9602] gi|321167707|gb|ADW73406.1| C-5 cytosine-specific DNA methylase [Rahnella sp. Y9602] Length = 665 Score = 38.2 bits (89), Expect = 0.34, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 17/91 (18%) Query: 2 LK--ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG- 54 +K I D F G GG +E S +I + ++ + N P TL + Sbjct: 1 MKEIIVDNFAGGGGASTGIEMATGR-------SVDIAINHDENAIAMHSTNHPETLHYCE 53 Query: 55 ---DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 D+ I + C+ FS+A Sbjct: 54 SVFDVDPIAATAGRPVGLAWFSPDCRHFSKA 84 >gi|145499550|ref|XP_001435760.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124402895|emb|CAK68363.1| unnamed protein product [Paramecium tetraurelia] Length = 421 Score = 38.2 bits (89), Expect = 0.34, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 4/61 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 +K+ DLFCGIG L + N +C ++++NP N + + + Sbjct: 214 IKVLDLFCGIGPFSL---RIAKDLNAQCL-ANDLNPECYYYLLKNIIENKVQNQVTPLNM 269 Query: 62 Q 62 Sbjct: 270 D 270 >gi|283786285|ref|YP_003366150.1| prophage DNA cytosine methylase [Citrobacter rodentium ICC168] gi|282949739|emb|CBG89358.1| putative prophage DNA cytosine methylase [Citrobacter rodentium ICC168] Length = 575 Score = 38.2 bits (89), Expect = 0.35, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG----D 55 I D F G GG +E S +I + ++ ++ N P+TL + D Sbjct: 5 IVDNFAGGGGASTGIELAIGR-------SVDIAINHDENAIAMHKTNHPDTLHYCESVFD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 + + + C+ FS+A Sbjct: 58 VDPLAATGGNPVGLAWFSPDCRHFSKA 84 >gi|322487896|emb|CBZ23140.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 321 Score = 38.2 bits (89), Expect = 0.36, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 12/85 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 + D+FCGIG L L N + + E NP S+ + N + GD Sbjct: 164 VVDMFCGIGYFTLPLAMHGNVAAIH---ALEKNPDSIDFVKLNAVLNKVDHLIHPVCGDN 220 Query: 57 AKIKTQDIPDHDVLLAG--FPCQPF 79 ++ + + D ++ G C+ F Sbjct: 221 REVGEELLGKCDRVVMGYIPTCKSF 245 >gi|297834636|ref|XP_002885200.1| methyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297331040|gb|EFH61459.1| methyltransferase family protein [Arabidopsis lyrata subsp. lyrata] Length = 743 Score = 38.2 bits (89), Expect = 0.36, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 11/85 (12%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD---IAK 58 L + LF GIGG + L++ H S E S + + + G+ I + Sbjct: 619 LTVLSLFSGIGGAEIALDRLGIHLKG--VVSVESCGLSRNILKRWWQTSGQTGELVQIEE 676 Query: 59 IKTQDIPDHDVLL---AGFP---CQ 77 IK+ + L+ GF CQ Sbjct: 677 IKSLTTKKLETLVQRFGGFDFVICQ 701 >gi|48697223|ref|YP_024953.1| putative methyl transferase protein [Burkholderia phage BcepC6B] gi|47779029|gb|AAT38392.1| putative methyl transferase protein [Burkholderia phage BcepC6B] Length = 343 Score = 38.2 bits (89), Expect = 0.36, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQ------ANFPNTLIFGDIAKIKTQDIP------------------- 65 + +EI+P++ + + + I ++ D+ Sbjct: 5 YYNEIDPHAAQWLRNLIAAGHIAAGHVDERSIEDVQPDDLRGYSQCHFFAGIGVWSYALR 64 Query: 66 ------DHDVLLAGFPCQPFSQAG 83 D V PCQPFS AG Sbjct: 65 RAGWPDDRPVWTGSCPCQPFSAAG 88 >gi|261350337|ref|ZP_05975754.1| met-10+ protein [Methanobrevibacter smithii DSM 2374] gi|288861121|gb|EFC93419.1| met-10+ protein [Methanobrevibacter smithii DSM 2374] Length = 335 Score = 38.2 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 10/76 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIFGDI 56 I D+FCGIG + + + + NV + +IN ++K N I GDI Sbjct: 188 NILDMFCGIGPFPVVIAK---NNNVNIT-AVDINKNAIKYLNENIRLNKLHNIEAICGDI 243 Query: 57 AKIKTQDIPDHDVLLA 72 ++ +D ++ Sbjct: 244 NEVSKNLNKKYDRIIM 259 >gi|222445095|ref|ZP_03607610.1| hypothetical protein METSMIALI_00714 [Methanobrevibacter smithii DSM 2375] gi|222434660|gb|EEE41825.1| hypothetical protein METSMIALI_00714 [Methanobrevibacter smithii DSM 2375] Length = 335 Score = 38.2 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 10/76 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIFGDI 56 I D+FCGIG + + + + NV + +IN ++K N I GDI Sbjct: 188 NILDMFCGIGPFPVVIAK---NNNVNIT-AVDINKNAIKYLNENIRLNKLHNIEAICGDI 243 Query: 57 AKIKTQDIPDHDVLLA 72 ++ +D ++ Sbjct: 244 NEVSKNLNKKYDRIIM 259 >gi|148642862|ref|YP_001273375.1| methyltransferase [Methanobrevibacter smithii ATCC 35061] gi|148551879|gb|ABQ87007.1| methyltransferase [Methanobrevibacter smithii ATCC 35061] Length = 335 Score = 38.2 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 10/76 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIFGDI 56 I D+FCGIG + + + + NV + +IN ++K N I GDI Sbjct: 188 NILDMFCGIGPFPVVIAK---NNNVNIT-AVDINKNAIKYLNENIRLNKLHNIEAICGDI 243 Query: 57 AKIKTQDIPDHDVLLA 72 ++ +D ++ Sbjct: 244 NEVSKNLNKKYDRIIM 259 >gi|291007578|ref|ZP_06565551.1| DNA modification methylase M.NGOI [Saccharopolyspora erythraea NRRL 2338] Length = 308 Score = 38.2 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 8/74 (10%) Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIP---DHDV 69 + + LE + + + + T + N P + D+ + D P D D+ Sbjct: 1 MAIGLEAA----GFDPVMLFDEDTDACATLRINRPTWDVREYDLFEFIGNDHPQVLDVDL 56 Query: 70 LLAGFPCQPFSQAG 83 P P+S AG Sbjct: 57 FAGAPPRVPYSVAG 70 >gi|254383123|ref|ZP_04998477.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194342022|gb|EDX22988.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length = 413 Score = 38.2 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 6/65 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DL CGIGG L L + + + +P +V +AN L D+ +++ D Sbjct: 101 VADLCCGIGGDALALARLGIR-----VLAVDRDPLTVAVARAN-AEALGLADLIEVREAD 154 Query: 64 IPDHD 68 + + D Sbjct: 155 VTEVD 159 >gi|29831531|ref|NP_826165.1| hypothetical protein SAV_4988 [Streptomyces avermitilis MA-4680] gi|29608647|dbj|BAC72700.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 390 Score = 38.2 bits (89), Expect = 0.38, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 6/65 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DL CGIGG + L + + + +P + +AN L D+ +++ D Sbjct: 101 VADLCCGIGGDAIALARAGIR-----VLAVDRDPLTAAVARAN-AGELGLTDLIEVREAD 154 Query: 64 IPDHD 68 + + D Sbjct: 155 VTEVD 159 >gi|283783534|ref|YP_003374288.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gardnerella vaginalis 409-05] gi|283441994|gb|ADB14460.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gardnerella vaginalis 409-05] Length = 304 Score = 38.2 bits (89), Expect = 0.39, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 7/51 (13%) Query: 2 LKITDLFCGIG--GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 L + DL G G G+ + E ++ E +P + + Q NF T Sbjct: 121 LTVVDLCAGSGAIGLSIAAEVADAQ-----VWAVEKSPEAFQYLQKNFEET 166 >gi|159897859|ref|YP_001544106.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus ATCC 23779] gi|159890898|gb|ABX03978.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus ATCC 23779] Length = 415 Score = 38.2 bits (89), Expect = 0.39, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 22/77 (28%) Query: 26 NVECFFSSEINPYSVKTYQAN----FPNTLIFGD-------IAKIKTQDIP--------- 65 N + + N + +Y N N + K+++ ++ Sbjct: 30 NFRPLCAVDFNVDACTSYNMNMQWLHQNAPHLQTTQASKAYLRKVESLNVNAVKRLFQLQ 89 Query: 66 --DHDVLLAGFPCQPFS 80 D D+L+ G PCQ +S Sbjct: 90 QGDLDILMGGPPCQGYS 106 >gi|115525257|ref|YP_782168.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisA53] gi|115519204|gb|ABJ07188.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisA53] Length = 589 Score = 38.2 bits (89), Expect = 0.39, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 37/134 (27%), Gaps = 57/134 (42%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKT-----YQANFPNT----- 50 + D+F G GG+ R + S E + + +T + FPN Sbjct: 81 VVDVFAGPGGLGEGFAALRGKRFSARFDSVVSIERDESAHQTLLLRHFLRRFPNQQFPDD 140 Query: 51 ---LIFGDIAKIKTQDI---------------------PDHDV----------------- 69 + GDI ++ PD Sbjct: 141 YYRYLRGDI---DCDELYRNHREEFGEAKKSALQISLGPDSHAEVKRIISRKLKGQQKWA 197 Query: 70 LLAGFPCQPFSQAG 83 L+ G PCQ +S G Sbjct: 198 LVGGPPCQAYSIVG 211 >gi|325180235|emb|CCA14638.1| tRNA wybutosinesynthesizing protein putative [Albugo laibachii Nc14] Length = 854 Score = 38.2 bits (89), Expect = 0.39, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 I DLFCGIG L H + + NP ++ Q N Sbjct: 691 IVDLFCGIGYYVLPF---LVHGGASMVHACDWNPDAITALQYN 730 >gi|159897886|ref|YP_001544133.1| type II restriction-modification system DNA cytosine-specific methylase [Herpetosiphon aurantiacus ATCC 23779] gi|159890925|gb|ABX04005.1| type II restriction-modification system DNA cytosine-specific methylase [Herpetosiphon aurantiacus ATCC 23779] Length = 78 Score = 38.2 bits (89), Expect = 0.39, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 5/76 (6%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60 + +TDLFC GG + + ++T N P+T DI Sbjct: 4 MTVTDLFCSAGGSSTGVVNA----GATVRMALNHWKLVIETNNMNHPDTDHDCTDIQACD 59 Query: 61 TQDIPDHDVLLAGFPC 76 + P +L+A C Sbjct: 60 PRRYPRTTILIASPEC 75 >gi|239928909|ref|ZP_04685862.1| hypothetical protein SghaA1_11860 [Streptomyces ghanaensis ATCC 14672] gi|291437236|ref|ZP_06576626.1| gp77 [Streptomyces ghanaensis ATCC 14672] gi|291340131|gb|EFE67087.1| gp77 [Streptomyces ghanaensis ATCC 14672] Length = 244 Score = 38.2 bits (89), Expect = 0.39, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 16/80 (20%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-----IA 57 ++ DLFC GG + + + +I P + N+P GD Sbjct: 16 RLLDLFCCAGGAAVGYARAGFAVDG-----CDIAP------RPNYPFPYHHGDALAHLAR 64 Query: 58 KIKTQDIPDHDVLLAGFPCQ 77 I++ +I + + A PCQ Sbjct: 65 LIESGEIRRYAFVHASPPCQ 84 >gi|188585811|ref|YP_001917356.1| ribosomal protein L11 methyltransferase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350498|gb|ACB84768.1| ribosomal protein L11 methyltransferase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 324 Score = 38.2 bits (89), Expect = 0.39, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 11/76 (14%) Query: 3 KITDLFCGIG-GIRLDLEQTFNHRNVECFFSSEINPYSVKT--YQANFPNTLIFGDIA-- 57 K+ DL G G GI L VE F+ +I+ + + AN DI Sbjct: 190 KVIDL--GCGSGI---LSIAAAKLGVEKVFAYDIDSVACRVAGQNANLNEVRDLIDIKRG 244 Query: 58 KIKTQDIPD-HDVLLA 72 +K Q + + DV++ Sbjct: 245 DVKKQVVEEKADVVVG 260 >gi|326561616|gb|EGE11954.1| hypothetical protein E9M_05783 [Moraxella catarrhalis 46P47B1] gi|326572752|gb|EGE22738.1| hypothetical protein E9S_00345 [Moraxella catarrhalis BC7] Length = 46 Score = 38.2 bits (89), Expect = 0.40, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 2 LKITDLFCGIGGIRLDLEQ 20 + I LF G GG+ L ++ Sbjct: 1 MNIISLFSGCGGLDLGFKK 19 >gi|9630714|ref|NP_047260.1| putative C5 methylase MarMP [Mycoplasma phage MAV1] gi|193216971|ref|YP_002000213.1| bacteriophage MAV1 putative C5 methylase MarMP [Mycoplasma arthritidis 158L3-1] gi|3511247|gb|AAC33770.1| putative C5 methylase MarMP [Mycoplasma phage MAV1] gi|193002294|gb|ACF07509.1| bacteriophage MAV1 putative C5 methylase MarMP [Mycoplasma arthritidis 158L3-1] Length = 259 Score = 38.2 bits (89), Expect = 0.40, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Query: 41 KTYQANFPNTLIFGD--IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 K Y + + I D I ++ +P D++LA PC+ +S A Sbjct: 45 KNYFYHRIDLSILNDNLIQELN--KLPKPDIILASPPCESWSIA 86 >gi|145639873|ref|ZP_01795473.1| C-5 cytosine-specific DNA methylase [Haemophilus influenzae PittII] gi|145641713|ref|ZP_01797289.1| C-5 cytosine-specific DNA methylase [Haemophilus influenzae R3021] gi|145270964|gb|EDK10881.1| C-5 cytosine-specific DNA methylase [Haemophilus influenzae PittII] gi|145273527|gb|EDK13397.1| C-5 cytosine-specific DNA methylase [Haemophilus influenzae 22.4-21] Length = 262 Score = 38.2 bits (89), Expect = 0.40, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 5/40 (12%) Query: 43 YQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 Y F + +F + +P D+++A PC+ +S A Sbjct: 53 YGRMFGDNKLFD-----ELDKLPKPDLIIASPPCESWSVA 87 >gi|255261974|ref|ZP_05341316.1| RNA methyltransferase, RsmD family [Thalassiobium sp. R2A62] gi|255104309|gb|EET46983.1| RNA methyltransferase, RsmD family [Thalassiobium sp. R2A62] Length = 184 Score = 38.2 bits (89), Expect = 0.41, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 11/80 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--IAKIK 60 ++ DLF G GG L +E R E + ++ + N GD + I Sbjct: 49 RVLDLFAGTGG--LGIEAL--SRGAESAVFVDNGRRALDLLKHNIGLLRREGDAVVIAID 104 Query: 61 TQDIP-----DHDVLLAGFP 75 +P D++L P Sbjct: 105 AASLPVNKGAACDLILLDPP 124 >gi|319948349|ref|ZP_08022493.1| hypothetical protein ES5_03271 [Dietzia cinnamea P4] gi|319437980|gb|EFV92956.1| hypothetical protein ES5_03271 [Dietzia cinnamea P4] Length = 195 Score = 38.2 bits (89), Expect = 0.42, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 4/43 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF G G L LE R + + E NP +V + N Sbjct: 47 VLDLFAGSG--ALGLEAL--SRGADTAWFVEENPRAVACLKKN 85 >gi|15679861|ref|NP_276979.1| met-10+ protein [Methanothermobacter thermautotrophicus str. Delta H] gi|2623010|gb|AAB86339.1| met-10+ protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 352 Score = 37.8 bits (88), Expect = 0.44, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 14/77 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY-----QANFPNTLI---FGD 55 + D+F G G + + + ++ +INP +V+ Y + N +I GD Sbjct: 191 VLDMFAGAGPFAIAVARHGRASR---VYAVDINPAAVR-YIEENARLNHAEDVIVAVEGD 246 Query: 56 IAKI--KTQDIPDHDVL 70 + + + DH ++ Sbjct: 247 VREFLRDRECFADHIIM 263 >gi|307546988|ref|YP_003899467.1| DNA-cytosine methyltransferase [Halomonas elongata DSM 2581] gi|307219012|emb|CBV44282.1| DNA-cytosine methyltransferase [Halomonas elongata DSM 2581] Length = 566 Score = 37.8 bits (88), Expect = 0.44, Method: Composition-based stats. Identities = 9/15 (60%), Positives = 11/15 (73%) Query: 69 VLLAGFPCQPFSQAG 83 VL+ G PCQ +S AG Sbjct: 124 VLIGGPPCQAYSVAG 138 Score = 34.7 bits (80), Expect = 3.7, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLE---QTFNHRNVECFFSSEINPYSVKTY 43 I DLF G GG+ + R + S E + + +T Sbjct: 7 IVDLFAGPGGLGEGFSSIRRPDGSRQFKTLVSVEKDAAAHRTL 49 >gi|332558666|ref|ZP_08412988.1| DNA-cytosine methyltransferase [Rhodobacter sphaeroides WS8N] gi|332276378|gb|EGJ21693.1| DNA-cytosine methyltransferase [Rhodobacter sphaeroides WS8N] Length = 510 Score = 37.8 bits (88), Expect = 0.45, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 32/133 (24%), Gaps = 53/133 (39%) Query: 4 ITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKT---------YQANFPN--- 49 I DLF G GG+ H S E + +T Y A Sbjct: 7 IVDLFAGPGGLGEGFASLARDGHAPFRIGISVEKEASAHRTLTLRAFLREYMALHGTLPD 66 Query: 50 ---TLIFG-----DIAKIKTQDIPD-HD------------------------------VL 70 G D + + Q D +L Sbjct: 67 QFFEFHAGLETEPDWSAVDAQAWKHAVDEARALELGTEVAASAIDRAIESLKAGYDDTIL 126 Query: 71 LAGFPCQPFSQAG 83 + G PCQ +S G Sbjct: 127 IGGPPCQAYSLVG 139 >gi|325115599|emb|CBZ51154.1| hypothetical protein NCLIV_042270 [Neospora caninum Liverpool] Length = 1119 Score = 37.8 bits (88), Expect = 0.46, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA 45 + DLFCGIG L ++ + + N +++ ++A Sbjct: 849 TVVDLFCGIGYFSLAALTCAGVDRLKHLHACDWNRDALQFFEA 891 >gi|312959258|ref|ZP_07773776.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas fluorescens WH6] gi|311286518|gb|EFQ65081.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas fluorescens WH6] Length = 741 Score = 37.8 bits (88), Expect = 0.46, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 5/55 (9%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 DLF G GG + E + + NP ++ ++ N P+ + I + Sbjct: 187 VDLFAGGGGATMGQEMG---TGIPVDIAINHNPDAISMHKRNHPSAEHY--ITDV 236 >gi|241761120|ref|ZP_04759209.1| methyltransferase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374739|gb|EER64200.1| methyltransferase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 183 Score = 37.8 bits (88), Expect = 0.46, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 12/81 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55 L++ D+F G G L LE E +P + K ++N D Sbjct: 46 LRVADIFAGTG--ALGLESLSRGAAFS--LFVEQDPEACKILKSNIEKMGAQADTRLMAQ 101 Query: 56 -IAKIKTQDIPDHDVLLAGFP 75 ++ + P D+LL P Sbjct: 102 PVSSLAPISQP-FDLLLFDPP 121 >gi|56551471|ref|YP_162310.1| methyltransferase [Zymomonas mobilis subsp. mobilis ZM4] gi|260752917|ref|YP_003225810.1| methyltransferase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56543045|gb|AAV89199.1| methyltransferase [Zymomonas mobilis subsp. mobilis ZM4] gi|258552280|gb|ACV75226.1| methyltransferase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 183 Score = 37.8 bits (88), Expect = 0.46, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 12/81 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55 L++ D+F G G L LE E +P + K ++N D Sbjct: 46 LRVADIFAGTG--ALGLESLSRGAAFS--LFVEQDPEACKILKSNIEKMGAQADTRLMAQ 101 Query: 56 -IAKIKTQDIPDHDVLLAGFP 75 ++ + P D+LL P Sbjct: 102 PVSSLAPISQP-FDLLLFDPP 121 >gi|323489479|ref|ZP_08094706.1| putative methyltransferase [Planococcus donghaensis MPA1U2] gi|323396610|gb|EGA89429.1| putative methyltransferase [Planococcus donghaensis MPA1U2] Length = 191 Score = 37.8 bits (88), Expect = 0.47, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 DLF G GG L +E R ++ ++ + +V+T QAN Sbjct: 46 IDLFAGSGG--LGIEAL--SRGIDHVIFTDKDKRAVETIQAN 83 >gi|254172039|ref|ZP_04878715.1| Met-10+ like protein [Thermococcus sp. AM4] gi|214033935|gb|EEB74761.1| Met-10+ like protein [Thermococcus sp. AM4] Length = 331 Score = 37.8 bits (88), Expect = 0.47, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 11/62 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIFGDIA 57 + D+F G+G + L + + F+ ++NP++++ + N + I GD+ Sbjct: 185 VFDMFAGVGPYSILLAR-----KAKLVFAVDLNPWAIRYLEENIRLNKVYNVVPILGDVR 239 Query: 58 KI 59 K+ Sbjct: 240 KV 241 >gi|196231143|ref|ZP_03130003.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428] gi|196224973|gb|EDY19483.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428] Length = 161 Score = 37.8 bits (88), Expect = 0.47, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 11/80 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ DLF G G L +E E + +V + N T + GD+ + Sbjct: 20 RVLDLFAGSG--ALGIEALSRGAAAAT--FVESDRRAVAAIEKNLERTKLTGDVQPVDVF 75 Query: 63 DIPD-------HDVLLAGFP 75 D D++LA P Sbjct: 76 RFLDRLVGAGSFDLILADPP 95 >gi|326673745|ref|XP_003199977.1| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog [Danio rerio] Length = 408 Score = 37.8 bits (88), Expect = 0.47, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 12/72 (16%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--------NFPNTLIFG 54 + DL+ GIG L H N + E NP +V Q N T+ G Sbjct: 220 TVVDLYAGIGYFTLPY---LVHANAAHVHACEWNPDAVAALQKSLEINGVSNRC-TVHQG 275 Query: 55 DIAKIKTQDIPD 66 D ++ D+ D Sbjct: 276 DNRQLSLSDLAD 287 >gi|229018524|ref|ZP_04175384.1| Modification methylase, HemK [Bacillus cereus AH1273] gi|228742765|gb|EEL92905.1| Modification methylase, HemK [Bacillus cereus AH1273] Length = 258 Score = 37.8 bits (88), Expect = 0.48, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 7/76 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA---NFPNTLIFGDIAKIK 60 I DL CG G + L +S +I+P +V+ NF GD+ K Sbjct: 93 IVDLCCGSGAVGAALASALGRVE---LYSVDIDPIAVQCASRNVTNFGGHAFEGDLYKAL 149 Query: 61 TQDIPDH-DVLLAGFP 75 + H ++L+A P Sbjct: 150 PDSLKGHVNILVANVP 165 >gi|254420522|ref|ZP_05034246.1| C-5 cytosine-specific DNA methylase superfamily [Brevundimonas sp. BAL3] gi|196186699|gb|EDX81675.1| C-5 cytosine-specific DNA methylase superfamily [Brevundimonas sp. BAL3] Length = 598 Score = 37.8 bits (88), Expect = 0.49, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 7/79 (8%) Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQDIPD 66 F G GG + + N ++ +Q NFP+T + D+ + + I Sbjct: 36 FAGAGGSSEAYKMALGKHPD--VALN-HNATALAVHQVNFPDTEHYVADVFDVDPRHIRP 92 Query: 67 HDVL---LAGFPCQPFSQA 82 A C+ FS+A Sbjct: 93 GVKWRSFWASPDCRHFSKA 111 >gi|222617909|gb|EEE54041.1| hypothetical protein OsJ_00721 [Oryza sativa Japonica Group] Length = 558 Score = 37.8 bits (88), Expect = 0.50, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 18/79 (22%) Query: 4 ITDLFCGIG--GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------NTLIFGD 55 I DLFCG G G+ L + + E P ++ + N T + GD Sbjct: 407 ILDLFCGTGTIGLTLA-RRAKHVYGYEVV------PEAIADAKKNAKLNGISNATFVQGD 459 Query: 56 IAKIKT---QDIPDHDVLL 71 + KI ++ P D+++ Sbjct: 460 LNKINETFGKEFPKPDIII 478 >gi|218187673|gb|EEC70100.1| hypothetical protein OsI_00745 [Oryza sativa Indica Group] Length = 624 Score = 37.8 bits (88), Expect = 0.50, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 18/79 (22%) Query: 4 ITDLFCGIG--GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------NTLIFGD 55 I DLFCG G G+ L + + E P ++ + N T + GD Sbjct: 473 ILDLFCGTGTIGLTLA-RRAKHVYGYEVV------PEAIADAKKNAKLNGISNATFVQGD 525 Query: 56 IAKIKT---QDIPDHDVLL 71 + KI ++ P D+++ Sbjct: 526 LNKINETFGKEFPKPDIII 544 >gi|307331070|ref|ZP_07610199.1| conserved hypothetical protein [Streptomyces violaceusniger Tu 4113] gi|306883281|gb|EFN14338.1| conserved hypothetical protein [Streptomyces violaceusniger Tu 4113] Length = 393 Score = 37.8 bits (88), Expect = 0.51, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 12/69 (17%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGD 55 ++ DL CGIGG + L +T + + +P + +AN + D Sbjct: 103 RMADLCCGIGGDAIALARTGIS-----VLAVDRDPLTCAVARANAQALGLAELIEIRCAD 157 Query: 56 IAKIKTQDI 64 + I T+ Sbjct: 158 VTDIDTRPF 166 >gi|307258744|ref|ZP_07540476.1| C-5 cytosine-specific DNA methylase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306867095|gb|EFM98951.1| C-5 cytosine-specific DNA methylase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 244 Score = 37.8 bits (88), Expect = 0.51, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Query: 53 FGDIAKIKTQD-IPDHDVLLAGFPCQPFSQA 82 FGD T D +P D+++A PC+ +S A Sbjct: 39 FGDNTLFDTLDKLPQPDLIIASPPCESWSVA 69 >gi|25026603|ref|NP_736657.1| hypothetical protein CE0047 [Corynebacterium efficiens YS-314] gi|259508264|ref|ZP_05751164.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|23491882|dbj|BAC16857.1| hypothetical protein [Corynebacterium efficiens YS-314] gi|259164152|gb|EEW48706.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 604 Score = 37.8 bits (88), Expect = 0.51, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 12/80 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA-----NFPNTLIFGDIA 57 + D CG GG + F ++ ++IN ++ T QA N+ T DI Sbjct: 173 TVLDFACGAGGTLQAIHHRFPEATLQ---GNDINATALATAQARAIPGNWTATWTHRDI- 228 Query: 58 KIKTQDIP--DHDVLLAGFP 75 I+ +P D++ + P Sbjct: 229 -IEAGALPADSFDLVCSNPP 247 >gi|318085426|gb|ADV39895.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp. enterica] Length = 273 Score = 37.8 bits (88), Expect = 0.51, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 9/91 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDI--- 56 L + LF G G + + F+ + + E+ + + AN P I Sbjct: 124 LSVCSLFHGGGVLDKAIHAGFHKAGIASAISVAVEMEGKYLDSSLANNPELWNEDSIVIE 183 Query: 57 AKIKTQDI----PDHDVLLAGFPCQPFSQAG 83 + I+ ++ P DVL+ G PC S++G Sbjct: 184 SPIQAVNLSKRPPQVDVLMGGIPCTGASKSG 214 >gi|296491874|ref|YP_003662339.1| putative DNA (cytosine-5-)-methyltransferase [Xenorhabdus nematophila ATCC 19061] gi|289176759|emb|CBJ92924.1| putative DNA (cytosine-5-)-methyltransferase [Xenorhabdus nematophila ATCC 19061] Length = 575 Score = 37.8 bits (88), Expect = 0.51, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 9/91 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDI--- 56 L + LF G G + + F+ + + E+ + + AN P I Sbjct: 158 LSVCSLFHGGGVLDKAIHAGFHKAGIASAISVAVEMEGKYLDSSLANNPELWNEDSIVIE 217 Query: 57 AKIKTQDI----PDHDVLLAGFPCQPFSQAG 83 + I+ ++ P DVL+ G PC S++G Sbjct: 218 SPIQAVNLSKRPPQVDVLMGGIPCTGASKSG 248 >gi|258624119|ref|ZP_05719069.1| C-5 cytosine-specific DNA methylase [Vibrio mimicus VM603] gi|258583550|gb|EEW08349.1| C-5 cytosine-specific DNA methylase [Vibrio mimicus VM603] Length = 333 Score = 37.8 bits (88), Expect = 0.51, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 9/91 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDI--- 56 L + LF G G + + F+ + + E+ + + AN P I Sbjct: 124 LSVCSLFHGGGVLDKAIHAGFHKAGIASAISVAVEMEGKYLDSSLANNPELWNEDSIVIE 183 Query: 57 AKIKTQDI----PDHDVLLAGFPCQPFSQAG 83 + I+ ++ P DVL+ G PC S++G Sbjct: 184 SPIQAVNLSKRPPQVDVLMGGIPCTGASKSG 214 >gi|163644909|gb|ABY28346.1| putative C-5 cytosine-specific DNA methylase [Vibrio cholerae O139] Length = 285 Score = 37.8 bits (88), Expect = 0.51, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 9/91 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDI--- 56 L + LF G G + + F+ + + E+ + + AN P I Sbjct: 124 LSVCSLFHGGGVLDKAIHAGFHKAGIASAISVAVEMEGKYLDSSLANNPELWNEDSIVIE 183 Query: 57 AKIKTQDI----PDHDVLLAGFPCQPFSQAG 83 + I+ ++ P DVL+ G PC S++G Sbjct: 184 SPIQAVNLSKRPPQVDVLMGGIPCTGASKSG 214 >gi|118601986|ref|YP_908686.1| cytosine-specific DNA methylase [Photobacterium damselae subsp. piscicida] gi|118614724|ref|YP_908507.1| cytosine-specific DNA methylase [Photobacterium damselae subsp. piscicida] gi|134044487|ref|YP_001101821.1| C-5 cytosine-specific DNA methylase [Yersinia ruckeri] gi|134044859|ref|YP_001102203.1| C-5 cytosine-specific DNA methylase [Yersinia pestis biovar Orientalis str. IP275] gi|134047248|ref|YP_001101999.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|165937989|ref|ZP_02226549.1| cytosine-specific DNA methylase [Yersinia pestis biovar Orientalis str. IP275] gi|229516190|ref|ZP_04405639.1| site-specific DNA methylase [Vibrio cholerae RC9] gi|237640283|ref|YP_002891138.1| Dcm [Escherichia coli] gi|237810027|ref|YP_002894466.1| Dcm [Escherichia coli] gi|237810223|ref|YP_002894662.1| Dcm [Salmonella enterica] gi|118596815|dbj|BAF38119.1| cytosine-specific DNA methylase [Photobacterium damselae subsp. piscicida] gi|118596995|dbj|BAF38298.1| cytosine-specific DNA methylase [Photobacterium damselae subsp. piscicida] gi|133904850|gb|ABO40867.1| C-5 cytosine-specific DNA methylase [Yersinia ruckeri] gi|133905167|gb|ABO41182.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|133905393|gb|ABO42155.1| C-5 cytosine-specific DNA methylase [Yersinia pestis biovar Orientalis str. IP275] gi|165914012|gb|EDR32629.1| cytosine-specific DNA methylase [Yersinia pestis biovar Orientalis str. IP275] gi|229346840|gb|EEO11809.1| site-specific DNA methylase [Vibrio cholerae RC9] gi|229561502|gb|ACQ77705.1| Dcm [Escherichia coli] gi|229561707|gb|ACQ77909.1| Dcm [Salmonella enterica] gi|229561882|gb|ACQ78083.1| Dcm [Escherichia coli] gi|324008172|gb|EGB77391.1| C-5 cytosine-specific DNA methylase [Escherichia coli MS 57-2] gi|327536569|gb|AEA95402.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp. enterica serovar Dublin] gi|332144438|dbj|BAK19658.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 541 Score = 37.8 bits (88), Expect = 0.51, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 9/91 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDI--- 56 L + LF G G + + F+ + + E+ + + AN P I Sbjct: 124 LSVCSLFHGGGVLDKAIHAGFHKAGIASAISVAVEMEGKYLDSSLANNPELWNEDSIVIE 183 Query: 57 AKIKTQDI----PDHDVLLAGFPCQPFSQAG 83 + I+ ++ P DVL+ G PC S++G Sbjct: 184 SPIQAVNLSKRPPQVDVLMGGIPCTGASKSG 214 >gi|229024782|ref|ZP_04181218.1| Modification methylase, HemK [Bacillus cereus AH1272] gi|228736493|gb|EEL87052.1| Modification methylase, HemK [Bacillus cereus AH1272] Length = 232 Score = 37.8 bits (88), Expect = 0.52, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 7/76 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA---NFPNTLIFGDIAKIK 60 I DL CG G + L +S +I+P +V+ NF GD+ K Sbjct: 67 IVDLCCGSGAVGAALASALGRVE---LYSVDIDPIAVQCASRNVTNFGGHAFEGDLYKAL 123 Query: 61 TQDIPDH-DVLLAGFP 75 + H ++L+A P Sbjct: 124 PDSLKGHVNILVANVP 139 >gi|330723584|gb|AEC45954.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis MCLD] Length = 397 Score = 37.8 bits (88), Expect = 0.53, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%) Query: 49 NTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 + + DI K++ IP D D+ FPCQ SQ G Sbjct: 116 DKKFYTDINKVQI--IPKDIDIFTYSFPCQDLSQQG 149 >gi|330830237|ref|YP_004393189.1| Modification methylase [Aeromonas veronii B565] gi|328805373|gb|AEB50572.1| Modification methylase [Aeromonas veronii B565] Length = 433 Score = 37.8 bits (88), Expect = 0.53, Method: Composition-based stats. Identities = 9/15 (60%), Positives = 11/15 (73%) Query: 69 VLLAGFPCQPFSQAG 83 VL+ G PCQ +S AG Sbjct: 32 VLIGGPPCQAYSLAG 46 >gi|304372838|ref|YP_003856047.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1] gi|304309029|gb|ADM21509.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1] Length = 397 Score = 37.8 bits (88), Expect = 0.53, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%) Query: 49 NTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 + + DI K++ IP D D+ FPCQ SQ G Sbjct: 116 DKKFYTDINKVQI--IPKDIDIFTYSFPCQDLSQQG 149 >gi|307254284|ref|ZP_07536124.1| C-5 cytosine-specific DNA methylase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306862763|gb|EFM94717.1| C-5 cytosine-specific DNA methylase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] Length = 259 Score = 37.8 bits (88), Expect = 0.53, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Query: 53 FGDIAKIKTQD-IPDHDVLLAGFPCQPFSQA 82 FGD T D +P D+++A PC+ +S A Sbjct: 54 FGDNTLFDTLDKLPQPDLIIASPPCESWSVA 84 >gi|113954400|ref|YP_730547.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Synechococcus sp. CC9311] gi|113881751|gb|ABI46709.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Synechococcus sp. CC9311] Length = 464 Score = 37.8 bits (88), Expect = 0.53, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 11/79 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIFGDI 56 ++ D +CGIG I L + + EINP SV+ + N GD+ Sbjct: 315 RLIDAYCGIGTISLPVAAA----GIGVVGL-EINPASVQQARQNAALNGLTDAKFEAGDV 369 Query: 57 AKIKTQDIPDHDVLLAGFP 75 A + + +PDHD L+ P Sbjct: 370 ASLLSDYLPDHDALVVDPP 388 >gi|33600653|ref|NP_888213.1| modification methylase [Bordetella bronchiseptica RB50] gi|33568253|emb|CAE32165.1| modification methylase [Bordetella bronchiseptica RB50] Length = 644 Score = 37.8 bits (88), Expect = 0.53, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 19/89 (21%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 + D+F G GG EQ + P ++ ++ N P + D+ ++ + Sbjct: 15 VVDIFAGGGGWSTAYEQATGQHVHIAINHN---PDALSMHEVNHPQAQHYIADVWEVCPR 71 Query: 63 DIPDHDVLLAGFP---------CQPFSQA 82 + G P C SQA Sbjct: 72 E------ATGGMPVGWLHLSPDCTDHSQA 94 >gi|238821331|ref|YP_002925147.1| hypothetical protein PH10_gp14 [Streptococcus phage PH10] gi|238804913|emb|CAY56507.1| hypothetical protein [Streptococcus phage PH10] Length = 222 Score = 37.8 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 5/40 (12%) Query: 43 YQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 Y+ F + ++F D+ +P D+++A PC+ +S A Sbjct: 18 YKRLFGDNMLF-DV----LNKLPKPDLVIASPPCESWSNA 52 >gi|75859106|ref|XP_868893.1| hypothetical protein AN9511.2 [Aspergillus nidulans FGSC A4] gi|40747596|gb|EAA66752.1| hypothetical protein AN9511.2 [Aspergillus nidulans FGSC A4] Length = 187 Score = 37.8 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 19/85 (22%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--------- 54 + D+F G GG + ++ + + ++ E +P +++ Q N ++G Sbjct: 94 LVDVFAGAGGNTIAFARSGHWKR---VYAIEKDPATLRCAQHN---AEVYGVADKITWFQ 147 Query: 55 ----DIAKIKTQDIPDHDVLLAGFP 75 DI K + +D+ + VL A P Sbjct: 148 GDCFDILKSQLKDLAPYSVLFASPP 172 >gi|115435048|ref|NP_001042282.1| Os01g0193600 [Oryza sativa Japonica Group] gi|9988445|dbj|BAB12711.1| putative RNA methyltransferase [Oryza sativa Japonica Group] gi|10934074|dbj|BAB16852.1| putative RNA methyltransferase [Oryza sativa Japonica Group] gi|113531813|dbj|BAF04196.1| Os01g0193600 [Oryza sativa Japonica Group] gi|215697095|dbj|BAG91089.1| unnamed protein product [Oryza sativa Japonica Group] Length = 557 Score = 37.8 bits (88), Expect = 0.55, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 18/79 (22%) Query: 4 ITDLFCGIG--GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------NTLIFGD 55 I DLFCG G G+ L + + E P ++ + N T + GD Sbjct: 406 ILDLFCGTGTIGLTLA-RRAKHVYGYEVV------PEAIADAKKNAKLNGISNATFVQGD 458 Query: 56 IAKIKT---QDIPDHDVLL 71 + KI ++ P D+++ Sbjct: 459 LNKINETFGKEFPKPDIII 477 >gi|329848440|ref|ZP_08263468.1| C-5 cytosine-specific DNA methylase family protein [Asticcacaulis biprosthecum C19] gi|328843503|gb|EGF93072.1| C-5 cytosine-specific DNA methylase family protein [Asticcacaulis biprosthecum C19] Length = 618 Score = 37.8 bits (88), Expect = 0.56, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 29/105 (27%), Gaps = 33/105 (31%) Query: 7 LFCGIGGIRLDLEQTFNHRN-----VECFFSSEINPYSVKT------------------- 42 FCGIG + + C +++ ++ Sbjct: 15 FFCGIGMGAAGFNEGTARLGNLEARLRCIGGIDVDKDAIANFDRFAGVKGTCMDLFTLEQ 74 Query: 43 YQANFPNTLIFG-------DIAKIKTQDIPDHDVLLAGFPCQPFS 80 Y A G DI + + P D++ PC+ FS Sbjct: 75 YIAFHGKAPPPGWREATPADIQRAAGFERP--DIVFLSAPCKGFS 117 >gi|299145703|ref|ZP_07038771.1| putative DNA cytosine-specific methylase [Bacteroides sp. 3_1_23] gi|298516194|gb|EFI40075.1| putative DNA cytosine-specific methylase [Bacteroides sp. 3_1_23] Length = 520 Score = 37.4 bits (87), Expect = 0.57, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 1/47 (2%) Query: 37 PYSVKTYQANFPN-TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 +V+T+ NFP DI + + D+L+ C S A Sbjct: 5 KLAVETHNTNFPEADHDCADIQAVDPRRYQSTDILITSPECTNHSLA 51 >gi|226329615|ref|ZP_03805133.1| hypothetical protein PROPEN_03524 [Proteus penneri ATCC 35198] gi|225202801|gb|EEG85155.1| hypothetical protein PROPEN_03524 [Proteus penneri ATCC 35198] Length = 134 Score = 37.4 bits (87), Expect = 0.57, Method: Composition-based stats. Identities = 9/17 (52%), Positives = 11/17 (64%) Query: 67 HDVLLAGFPCQPFSQAG 83 D++ G PCQ FS AG Sbjct: 47 VDLVSGGPPCQGFSMAG 63 >gi|159477134|ref|XP_001696666.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas reinhardtii] gi|158282891|gb|EDP08643.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas reinhardtii] Length = 1333 Score = 37.4 bits (87), Expect = 0.57, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 3/32 (9%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN 36 D+F G GG+ L Q+ ++ E + Sbjct: 714 LDIFAGCGGLSEGLHQSGVSS---TLWAVEFD 742 >gi|332157651|ref|YP_004422930.1| hypothetical protein PNA2_0007 [Pyrococcus sp. NA2] gi|331033114|gb|AEC50926.1| hypothetical protein PNA2_0007 [Pyrococcus sp. NA2] Length = 330 Score = 37.4 bits (87), Expect = 0.58, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + D+F GIG + L + V F+S++NP++++ + N Sbjct: 186 VFDMFAGIGPFSILLAK-----KVRLVFASDLNPWAIRYLEEN 223 >gi|307294802|ref|ZP_07574644.1| C-5 cytosine-specific DNA methylase [Sphingobium chlorophenolicum L-1] gi|306879276|gb|EFN10494.1| C-5 cytosine-specific DNA methylase [Sphingobium chlorophenolicum L-1] Length = 332 Score = 37.4 bits (87), Expect = 0.58, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 6/54 (11%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKTQDI------PDHDVLLAGFPCQPFS 80 +++P + N D+A + D+ + VL PCQPFS Sbjct: 7 VDLDPSCKHPLEENTGAKFEKRDVADVTADDLIGWFGDAEVRVLAGCAPCQPFS 60 >gi|228911354|ref|ZP_04075157.1| C-5 cytosine-specific DNA methylase [Bacillus thuringiensis IBL 200] gi|228848291|gb|EEM93142.1| C-5 cytosine-specific DNA methylase [Bacillus thuringiensis IBL 200] Length = 418 Score = 37.4 bits (87), Expect = 0.59, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 12/65 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFGD-IAK 58 I D FCG GG +E S +I +P ++ ++ N P+T + + + + Sbjct: 10 IVDNFCGGGGASTGIEMATG-------LSVDIAINHDPAAIAMHRINHPDTEHYCESVWE 62 Query: 59 IKTQD 63 + ++ Sbjct: 63 VDPRE 67 >gi|111021210|ref|YP_704182.1| site-specific DNA-methyltransferase (adenine-specific) [Rhodococcus jostii RHA1] gi|110820740|gb|ABG96024.1| possible site-specific DNA-methyltransferase (adenine-specific) [Rhodococcus jostii RHA1] Length = 262 Score = 37.4 bits (87), Expect = 0.59, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAK-IK 60 + DL CG G + L +T + +E ++ +I+P +V+ + N P+ + GD+ + + Sbjct: 99 VADLCCGSGAVGAALAETGD--GIE-LYAVDIDPAAVRCARRNVPDPGRVFEGDLYEPLP 155 Query: 61 TQDIPDHDVLLAGFP 75 T DVL+A P Sbjct: 156 TALRGGIDVLVANAP 170 >gi|47212795|emb|CAF96170.1| unnamed protein product [Tetraodon nigroviridis] Length = 270 Score = 37.4 bits (87), Expect = 0.60, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 12/32 (37%) Query: 50 TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81 DI K + D+++ G PC S Sbjct: 42 VHDVRDITKKNIMEWGPFDLVIGGSPCNDLSI 73 >gi|315612388|ref|ZP_07887301.1| C-5 cytosine-specific DNA methylase [Streptococcus sanguinis ATCC 49296] gi|315315369|gb|EFU63408.1| C-5 cytosine-specific DNA methylase [Streptococcus sanguinis ATCC 49296] Length = 222 Score = 37.4 bits (87), Expect = 0.60, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 5/40 (12%) Query: 43 YQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 Y+ F + +F D+ +P D+++A PC+ +S A Sbjct: 18 YKRLFGDNTLF-DV----LDKLPKPDLVIASPPCESWSNA 52 >gi|253999374|ref|YP_003051437.1| C-5 cytosine-specific DNA methylase [Methylovorus sp. SIP3-4] gi|253986053|gb|ACT50910.1| C-5 cytosine-specific DNA methylase [Methylovorus sp. SIP3-4] Length = 606 Score = 37.4 bits (87), Expect = 0.60, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKTQ 62 I DLF G GG ++ ++ ++ ++ N P+T F D+ ++ + Sbjct: 22 IVDLFAGGGGKSEGIKIASGRNPDIAINHND---DALSMHRINHPDTRHFVADVFEVDPR 78 Query: 63 DI---PDHDVLLAGFPCQPFSQA 82 + L A C SQA Sbjct: 79 TVTQGRPVGHLHASPDCTHHSQA 101 >gi|229541608|ref|ZP_04430668.1| RNA methyltransferase, TrmA family [Bacillus coagulans 36D1] gi|229326028|gb|EEN91703.1| RNA methyltransferase, TrmA family [Bacillus coagulans 36D1] Length = 468 Score = 37.4 bits (87), Expect = 0.60, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Query: 3 KITDLFCGIGGIRLDL-EQTFNHRNVECFFSS 33 K+ DLFCG+G L ++ +E +S Sbjct: 318 KMIDLFCGVGTFSLPFADRVGELAGIEIVETS 349 >gi|15292897|gb|AAK92819.1| unknown protein [Arabidopsis thaliana] Length = 710 Score = 37.4 bits (87), Expect = 0.60, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF GIGG + L++ H S E S + + + G++ +I+ Sbjct: 589 LTVLSLFSGIGGAEIALDRLGIHLKG--VVSVESCGLSRNILKRWWQTSGQTGELVQIEE 646 >gi|18401465|ref|NP_566573.1| methyltransferase family protein [Arabidopsis thaliana] gi|30684462|ref|NP_850603.1| methyltransferase family protein [Arabidopsis thaliana] gi|23297499|gb|AAN12982.1| unknown protein [Arabidopsis thaliana] gi|222422929|dbj|BAH19451.1| AT3G17310 [Arabidopsis thaliana] gi|332642414|gb|AEE75935.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein [Arabidopsis thaliana] gi|332642415|gb|AEE75936.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein [Arabidopsis thaliana] Length = 710 Score = 37.4 bits (87), Expect = 0.60, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF GIGG + L++ H S E S + + + G++ +I+ Sbjct: 589 LTVLSLFSGIGGAEIALDRLGIHLKG--VVSVESCGLSRNILKRWWQTSGQTGELVQIEE 646 >gi|268325441|emb|CBH39029.1| conserved hypothetical protein, Met-10+ like-protein family [uncultured archaeon] gi|268325748|emb|CBH39336.1| conserved hypothetical protein, Met-10+ like-protein family [uncultured archaeon] Length = 367 Score = 37.4 bits (87), Expect = 0.61, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 9/62 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------TLIFGDIA 57 I D+F G+G + Q + +INP +++ N I GD++ Sbjct: 193 IIDMFAGVGSFSI---QIAKRAPQSIVTAIDINPDAIRYLHENMEQNGVRNIEPIEGDVS 249 Query: 58 KI 59 I Sbjct: 250 GI 251 >gi|52549299|gb|AAU83148.1| predicted methyltransferase [uncultured archaeon GZfos26G2] Length = 367 Score = 37.4 bits (87), Expect = 0.61, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 9/62 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------TLIFGDIA 57 I D+F G+G + Q + +INP +++ N I GD++ Sbjct: 193 IIDMFAGVGSFSI---QIAKRAPQSIVTAIDINPDAIRYLHENMEQNGVRNIEPIEGDVS 249 Query: 58 KI 59 I Sbjct: 250 GI 251 >gi|46198867|ref|YP_004534.1| methyltransferase [Thermus thermophilus HB27] gi|55980897|ref|YP_144194.1| methyltransferase [Thermus thermophilus HB8] gi|46196490|gb|AAS80907.1| methyltransferase [Thermus thermophilus HB27] gi|55772310|dbj|BAD70751.1| methyltransferase [Thermus thermophilus HB8] Length = 185 Score = 37.4 bits (87), Expect = 0.61, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 5/44 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF G G + LE E E +P +V+ + N Sbjct: 58 RFLDLFAGSG--AVGLEAA--SEGWEAVL-VEKDPEAVRLLKEN 96 >gi|307245331|ref|ZP_07527419.1| C-5 cytosine-specific DNA methylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306853672|gb|EFM85889.1| C-5 cytosine-specific DNA methylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 271 Score = 37.4 bits (87), Expect = 0.64, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Query: 53 FGDIAKIKTQD-IPDHDVLLAGFPCQPFSQA 82 FGD T D +P D+++A PC+ +S A Sbjct: 66 FGDNTLFDTLDKLPQPDLIIASPPCESWSVA 96 >gi|221067990|ref|ZP_03544095.1| C-5 cytosine-specific DNA methylase [Comamonas testosteroni KF-1] gi|221068053|ref|ZP_03544158.1| C-5 cytosine-specific DNA methylase [Comamonas testosteroni KF-1] gi|220713013|gb|EED68381.1| C-5 cytosine-specific DNA methylase [Comamonas testosteroni KF-1] gi|220713076|gb|EED68444.1| C-5 cytosine-specific DNA methylase [Comamonas testosteroni KF-1] Length = 596 Score = 37.4 bits (87), Expect = 0.64, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 31/110 (28%), Gaps = 33/110 (30%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-----VECFFSSEINPYS----------------- 39 +K LFCG+GG + C +++ S Sbjct: 6 IKHFHLFCGLGGGARGFNRASPRVGNLQARFRCIGGIDVDSASIRDFGRLTGVPGTVLDL 65 Query: 40 --VKTYQANFPNTLIFG-------DIAKIKTQDIPDHDVLLAGFPCQPFS 80 + Y+ + DI + + P L A PC+ FS Sbjct: 66 FDREQYRTFHGSEPPADWHEATATDIQRAAGGERPHIVFLSA--PCKGFS 113 >gi|299144504|ref|ZP_07037583.1| RNA methyltransferase, RsmD family [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517592|gb|EFI41332.1| RNA methyltransferase, RsmD family [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 181 Score = 37.4 bits (87), Expect = 0.64, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 4/70 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + DLF G G + +E F R + + + + ++ T N + I + Sbjct: 44 NVLDLFSGSG--SIGIE--FLSRGAKFCYFVDNDKDAIDTINKNIKKAHCENNYKVILSG 99 Query: 63 DIPDHDVLLA 72 + D L Sbjct: 100 ALKVMDRLCG 109 >gi|328907996|gb|EGG27756.1| RNA methyltransferase, RsmD family [Propionibacterium sp. P08] Length = 202 Score = 37.4 bits (87), Expect = 0.65, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 4/43 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 DLF G G + LE R F+ + + ++ + N Sbjct: 57 FCDLFAGSGAM--ALEAA--SRGATTVFAVDRDRFACNVMRDN 95 >gi|313836633|gb|EFS74347.1| RNA methyltransferase, RsmD family [Propionibacterium acnes HL037PA2] gi|314928143|gb|EFS91974.1| RNA methyltransferase, RsmD family [Propionibacterium acnes HL044PA1] gi|314972141|gb|EFT16238.1| RNA methyltransferase, RsmD family [Propionibacterium acnes HL037PA3] Length = 170 Score = 37.4 bits (87), Expect = 0.65, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 4/43 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 DLF G G + LE R F+ + + ++ + N Sbjct: 25 FCDLFAGSGAM--ALEAA--SRGATTVFAVDRDRFACNVMRDN 63 >gi|302872122|ref|YP_003840758.1| sun protein [Caldicellulosiruptor obsidiansis OB47] gi|302574981|gb|ADL42772.1| sun protein [Caldicellulosiruptor obsidiansis OB47] Length = 423 Score = 37.4 bits (87), Expect = 0.65, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 10/83 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLIFGDIA 57 K+ DL GG + +IN + + + N F N ++ A Sbjct: 248 KVIDLCAAPGG--KTFNCAEVIDGF--VVACDINDHKLDVLRENILRLGFDNIIVAKSDA 303 Query: 58 KI-KTQDIPDHDVLLAGFPCQPF 79 ++ D+++A PC F Sbjct: 304 EVFNPDFAGRFDIVIADLPCTGF 326 >gi|326387633|ref|ZP_08209239.1| Fmu (Sun) [Novosphingobium nitrogenifigens DSM 19370] gi|326207679|gb|EGD58490.1| Fmu (Sun) [Novosphingobium nitrogenifigens DSM 19370] Length = 393 Score = 37.4 bits (87), Expect = 0.65, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 2/34 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN 36 + DL G GG L L +R + +I+ Sbjct: 206 TVIDLCAGAGGKTLALAAAMENRGR--LVACDID 237 >gi|196250365|ref|ZP_03149058.1| (Uracil-5)-methyltransferase [Geobacillus sp. G11MC16] gi|196210254|gb|EDY05020.1| (Uracil-5)-methyltransferase [Geobacillus sp. G11MC16] Length = 400 Score = 37.4 bits (87), Expect = 0.65, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Query: 3 KITDLFCGIGGIRLDLEQTFNH-RNVECFFSSEINPYS-VKT 42 K+ DLFCG+G L + +E +S P + KT Sbjct: 317 KMIDLFCGVGTFSLPFAKRVKALAGIEIVETSSNQPNATRKT 358 >gi|313897986|ref|ZP_07831526.1| C-5 cytosine-specific DNA methylase [Clostridium sp. HGF2] gi|312957258|gb|EFR38886.1| C-5 cytosine-specific DNA methylase [Clostridium sp. HGF2] Length = 514 Score = 37.4 bits (87), Expect = 0.66, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQ 62 I D F G GG +E R ++ + +P +++ ++ N P + + + Sbjct: 14 IVDNFAGGGGASTGIELALG-RPIDI--AINHDPDAIEMHKKNHPYTEHLCESVWDVDPV 70 Query: 63 DI---PDHDVLLAGFPCQPFSQA 82 + + C FS+A Sbjct: 71 QVCRGRKIALAWFSPDCTHFSKA 93 >gi|242348041|ref|YP_002995602.1| C-5 cytosine-specific DNA methylase [Aeromonas hydrophila] gi|224831860|gb|ACN66991.1| C-5 cytosine-specific DNA methylase [Aeromonas hydrophila] Length = 541 Score = 37.4 bits (87), Expect = 0.66, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 9/91 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDI--- 56 L + LF G G + + F+ + + E+ + + AN P I Sbjct: 124 LSVCSLFHGGGVLDKAIHAGFHKSGIASAISVAVEMEGKYLDSSLANNPELWNEDSIVIE 183 Query: 57 AKIKTQDI----PDHDVLLAGFPCQPFSQAG 83 + I+ ++ P DVL+ G PC S++G Sbjct: 184 SPIQAVNLSKRPPQVDVLMGGIPCTGASKSG 214 >gi|171464205|ref|YP_001798318.1| methyltransferase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193743|gb|ACB44704.1| methyltransferase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 198 Score = 37.4 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 16/46 (34%), Gaps = 4/46 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF 47 L+ DLF G G L E R E + + +NF Sbjct: 51 LRCLDLFAGTG--ALGFEAA--SRGATLVVLLEKDKKACANLTSNF 92 >gi|115480860|ref|NP_001064023.1| Os10g0104900 [Oryza sativa Japonica Group] gi|113638632|dbj|BAF25937.1| Os10g0104900 [Oryza sativa Japonica Group] Length = 406 Score = 37.4 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 2 DVDVICGGPPCQGIS 16 >gi|257075428|ref|ZP_05569789.1| DNA-cytosine methyltransferase [Ferroplasma acidarmanus fer1] Length = 386 Score = 37.4 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Query: 50 TLIFGDIA-KIKTQDIPDHDVLLAGFPCQPFSQ 81 +I +I K+K + I DV++ G PCQ +S Sbjct: 63 EIIADEITDKMKLKGIHKVDVMIGGPPCQTYSV 95 >gi|149181899|ref|ZP_01860387.1| RNA methyltransferase [Bacillus sp. SG-1] gi|148850338|gb|EDL64500.1| RNA methyltransferase [Bacillus sp. SG-1] Length = 398 Score = 37.4 bits (87), Expect = 0.68, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%) Query: 3 KITDLFCGIGGIRLDLE-QTFNHRNVECFFSS 33 K+ DLFCG+G L + +E SS Sbjct: 318 KMIDLFCGVGTFSLPFANRVGELAGIEIVESS 349 >gi|301118196|ref|XP_002906826.1| tRNA wybutosine-synthesizing protein, putative [Phytophthora infestans T30-4] gi|262108175|gb|EEY66227.1| tRNA wybutosine-synthesizing protein, putative [Phytophthora infestans T30-4] Length = 940 Score = 37.4 bits (87), Expect = 0.68, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 3/44 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 I DLFCGIG L H + E NP SV + N Sbjct: 778 TIVDLFCGIGYYVLPF---LVHGGASFVHACEWNPDSVAALRFN 818 >gi|153835199|ref|ZP_01987866.1| site-specific DNA methylase [Vibrio harveyi HY01] gi|148868309|gb|EDL67437.1| site-specific DNA methylase [Vibrio harveyi HY01] Length = 475 Score = 37.4 bits (87), Expect = 0.68, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 23/91 (25%) Query: 4 ITDLFCGIGG----IRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG- 54 + D F G GG I L L + +I +P ++ ++ N P T + Sbjct: 10 VVDNFAGGGGASTGISLGLNR-----------HVDIAINHDPEAIDMHKVNHPETEHYCE 58 Query: 55 ---DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 D+ ++ + C+ FS+A Sbjct: 59 SVWDVDPVEACKGRPVGLAWFSPDCKHFSKA 89 >gi|290510874|ref|ZP_06550244.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. 1_1_55] gi|289777590|gb|EFD85588.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. 1_1_55] Length = 616 Score = 37.4 bits (87), Expect = 0.69, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG----D 55 I D F G GG +E S +I + +V ++ N P+TL + D Sbjct: 5 IVDNFAGGGGASTGIEMALGR-------SVDIAINHDENAVAMHRTNHPDTLHYCESVFD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 ++ + C+ FS+A Sbjct: 58 VSPGAATSGKPVGLTWFSPDCRHFSKA 84 >gi|254303554|ref|ZP_04970912.1| DNA (cytosine-5-)-methyltransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323746|gb|EDK88996.1| DNA (cytosine-5-)-methyltransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 492 Score = 37.4 bits (87), Expect = 0.69, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Query: 40 VKTYQANFP-NTLIFG-DIAKIKTQDI-PDHDVLLAGFPCQPFSQAG 83 ++Y AN+ + F +++ + + D+ + G PCQ FS G Sbjct: 155 KQSYFANYDIDEENFHWNVSFLDGRQYTGKVDLFVGGSPCQSFSLVG 201 >gi|307258138|ref|ZP_07539888.1| C-5 cytosine-specific DNA methylase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863323|gb|EFM95256.1| C-5 cytosine-specific DNA methylase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 272 Score = 37.4 bits (87), Expect = 0.69, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Query: 53 FGDIAKIKTQD-IPDHDVLLAGFPCQPFSQA 82 FGD T D +P D+++A PC+ +S A Sbjct: 66 FGDNTLFDTLDKLPQPDLIIASPPCESWSVA 96 >gi|241997936|ref|XP_002433611.1| conserved hypothetical protein [Ixodes scapularis] gi|215495370|gb|EEC05011.1| conserved hypothetical protein [Ixodes scapularis] Length = 324 Score = 37.4 bits (87), Expect = 0.72, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 10/71 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGD 55 + DL+ GIG L H S E N + + N T+ FGD Sbjct: 142 TVVDLYAGIGYFTLPY---LVHAKARHIHSCEWNKDAAEALTKNLQLNGVEDRCTIHFGD 198 Query: 56 IAKIKTQDIPD 66 K+ + + D Sbjct: 199 CRKVCPEGVAD 209 >gi|119964526|ref|YP_946101.1| HemK family modification methylase [Arthrobacter aurescens TC1] gi|119951385|gb|ABM10296.1| putative modification methylase, HemK family [Arthrobacter aurescens TC1] Length = 294 Score = 37.4 bits (87), Expect = 0.72, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 7/76 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---FPNTLIFGDIAKIK 60 + DL CG G I L + +++I+P +V+ + N T+ GD+ Sbjct: 131 VVDLCCGSGAIGAALNDLLGSCELH---AADIDPAAVQCARRNVEPRGGTVHHGDLYGAL 187 Query: 61 TQDIP-DHDVLLAGFP 75 +++ D+LLA P Sbjct: 188 PRELRGKVDILLANAP 203 >gi|320009044|gb|ADW03894.1| hypothetical protein Sfla_2465 [Streptomyces flavogriseus ATCC 33331] Length = 404 Score = 37.4 bits (87), Expect = 0.72, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 6/65 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DL CGIGG + L + + + +P + + +AN L D+ +++ D Sbjct: 111 VADLCCGIGGDAIALARAGIS-----VLAVDRDPLTARVARAN-AEALGLQDLVEVRCAD 164 Query: 64 IPDHD 68 + + D Sbjct: 165 VTEID 169 >gi|242765200|ref|XP_002340926.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500] gi|218724122|gb|EED23539.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500] Length = 2138 Score = 37.4 bits (87), Expect = 0.73, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 11/74 (14%) Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----------DIP-DH 67 + + + + FS+EI + + NF ++F D+ ++ + +P Sbjct: 172 KMSIGPFSFKQLFSAEIVEHKQAYIERNFHPPILFRDVLELSKEFATTAYGAKKKVPTQP 231 Query: 68 DVLLAGFPCQPFSQ 81 D+L+ GFPC +S Sbjct: 232 DLLIVGFPCVDYSM 245 >gi|319777659|ref|YP_004137310.1| c-5 cytosine-specific DNA methylase [Mycoplasma fermentans M64] gi|238809483|dbj|BAH69273.1| hypothetical protein [Mycoplasma fermentans PG18] gi|318038734|gb|ADV34933.1| C-5 cytosine-specific DNA methylase [Mycoplasma fermentans M64] Length = 266 Score = 37.0 bits (86), Expect = 0.75, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 14/19 (73%) Query: 64 IPDHDVLLAGFPCQPFSQA 82 IP D+++A PC+ +S+A Sbjct: 65 IPKPDIIIASPPCESWSRA 83 >gi|238894201|ref|YP_002918935.1| putative site-specific DNA methylase [Klebsiella pneumoniae NTUH-K2044] gi|238546517|dbj|BAH62868.1| putative site-specific DNA methylase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 656 Score = 37.0 bits (86), Expect = 0.76, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFG----D 55 I D F G GG +E S +I + +V ++ N P+TL + D Sbjct: 5 IVDNFAGGGGASTGIEMAIGR-------SVDIAINHDENAVAMHRTNHPDTLHYCESVFD 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 ++ + C+ FS+A Sbjct: 58 VSPGAATSGKPVGLTWFSPDCRHFSKA 84 >gi|154324226|ref|XP_001561427.1| hypothetical protein BC1G_00512 [Botryotinia fuckeliana B05.10] gi|150842741|gb|EDN17934.1| hypothetical protein BC1G_00512 [Botryotinia fuckeliana B05.10] Length = 190 Score = 37.0 bits (86), Expect = 0.76, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 28/86 (32%), Gaps = 19/86 (22%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKIK 60 I DLF G GG + + + + E +P + + N ++G +I + Sbjct: 32 TIIDLFAGAGGNSIAFALSNRWAH---VIAIEKDPSVIACAENN---AYVYGATNITWVN 85 Query: 61 TQDI-----------PDHDVLLAGFP 75 P V+ A P Sbjct: 86 GDCFEYLKTHASSINPSETVIFASPP 111 >gi|258597054|ref|XP_001347464.2| conserved Plasmodium protein [Plasmodium falciparum 3D7] gi|254922428|gb|AAN35377.2| conserved Plasmodium protein [Plasmodium falciparum 3D7] Length = 1904 Score = 37.0 bits (86), Expect = 0.77, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRN-VECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 + DLFCG+G L L + +N + +F+ +INP S+K + ++ +I K Sbjct: 1649 NVVDLFCGVGYFTLPLLKCIEAQNKINNYFACDINPDSLKLLR----ESIKLNNINK 1701 >gi|167566476|ref|ZP_02359392.1| hypothetical protein BoklE_28219 [Burkholderia oklahomensis EO147] Length = 413 Score = 37.0 bits (86), Expect = 0.77, Method: Composition-based stats. Identities = 10/17 (58%), Positives = 12/17 (70%) Query: 67 HDVLLAGFPCQPFSQAG 83 D ++AGFPCQ S AG Sbjct: 27 VDCVVAGFPCQDLSVAG 43 >gi|189218688|ref|YP_001939329.1| N6-adenine-specific methylase [Methylacidiphilum infernorum V4] gi|189185546|gb|ACD82731.1| N6-adenine-specific methylase [Methylacidiphilum infernorum V4] Length = 184 Score = 37.0 bits (86), Expect = 0.77, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 9/78 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-----DIA 57 K+ DLF G G L +E + + C F + + ++ + N + G D+ Sbjct: 46 KVVDLFAGSG--SLGIE-ALSRGALSCTF-VDKSKECIECIKINLKKAHLEGIVILEDVY 101 Query: 58 KIKTQDIPDHDVLLAGFP 75 K D +D++ A P Sbjct: 102 KFLKLDEAQYDLVFASPP 119 >gi|302671270|ref|YP_003831230.1| DNA-cytosine methyltransferase [Butyrivibrio proteoclasticus B316] gi|302395743|gb|ADL34648.1| DNA-cytosine methyltransferase [Butyrivibrio proteoclasticus B316] Length = 579 Score = 37.0 bits (86), Expect = 0.78, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 5/48 (10%) Query: 40 VKTYQANFP---NTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 +Y AN+ + + IA + + D+ + G PCQ FS G Sbjct: 244 KASYTANYDIKEDDFHWN-IAFLDGKQYAGKVDLFVGGSPCQSFSFVG 290 >gi|226305913|ref|YP_002765873.1| hypothetical protein RER_24260 [Rhodococcus erythropolis PR4] gi|229491409|ref|ZP_04385233.1| RNA methyltransferase, RsmD family [Rhodococcus erythropolis SK121] gi|226185030|dbj|BAH33134.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] gi|229321694|gb|EEN87491.1| RNA methyltransferase, RsmD family [Rhodococcus erythropolis SK121] Length = 188 Score = 37.0 bits (86), Expect = 0.78, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 4/51 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 + DLF G G L LE R E E + + +AN + G Sbjct: 47 VLDLFAGSG--ALGLEAL--SRGAEHVVLVESDAKAAAVIKANIGTVALPG 93 >gi|147801051|emb|CAN77847.1| hypothetical protein VITISV_020831 [Vitis vinifera] Length = 320 Score = 37.0 bits (86), Expect = 0.79, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 184 DADVICGGPPCQGIS 198 >gi|14211981|gb|AAK57553.1| unknown [Methanococcus voltae] Length = 232 Score = 37.0 bits (86), Expect = 0.79, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 17/81 (20%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPN--------TL 51 + D FCG G L + + + S+IN ++ + NF + Sbjct: 117 VLDGFCGCG--TLGMVAL--KKGAKKVIFSDINKIALYDLEYNLKINFGEEIFENNKVEI 172 Query: 52 IFGDIAKIKTQDIPDHDVLLA 72 I D + ++P D+LL Sbjct: 173 IHSDFMDLNFNNMPS-DILLG 192 >gi|11994548|dbj|BAB02735.1| unnamed protein product [Arabidopsis thaliana] Length = 751 Score = 37.0 bits (86), Expect = 0.79, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L + LF GIGG + L++ H S E S + + + G++ +I+ Sbjct: 630 LTVLSLFSGIGGAEIALDRLGIHLKG--VVSVESCGLSRNILKRWWQTSGQTGELVQIEE 687 >gi|328545736|ref|YP_004305845.1| phage DNA methyltransferase [polymorphum gilvum SL003B-26A1] gi|326415476|gb|ADZ72539.1| Phage DNA methyltransferase [Polymorphum gilvum SL003B-26A1] Length = 329 Score = 37.0 bits (86), Expect = 0.80, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 31/85 (36%) Query: 30 FFSSEINPYSVKTYQANFP------NTLIFGDIAKIKTQDIP------------------ 65 + ++ +P + + + + I +++ D+ Sbjct: 3 VYYNDADPAACEWLRELIAARLLPAGEVDERSILEVEPADLRGFVQCHFFAGIGGWPYAL 62 Query: 66 -------DHDVLLAGFPCQPFSQAG 83 D V PCQPFSQAG Sbjct: 63 RLAGVAEDLSVWTGSPPCQPFSQAG 87 >gi|222529034|ref|YP_002572916.1| Fmu (Sun) domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222455881|gb|ACM60143.1| Fmu (Sun) domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 406 Score = 37.0 bits (86), Expect = 0.81, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 10/83 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLIFGDIA 57 K+ DL GG + +IN + + + N F N ++ A Sbjct: 231 KVIDLCAAPGG--KTFNCAEVIDGF--VVACDINEHKLDILRENILRLGFDNIIVAKSNA 286 Query: 58 KI-KTQDIPDHDVLLAGFPCQPF 79 ++ D+++A PC F Sbjct: 287 EVFNPDFAEKFDIVIADLPCTGF 309 >gi|323492925|ref|ZP_08098065.1| hypothetical protein VIBR0546_16066 [Vibrio brasiliensis LMG 20546] gi|323312818|gb|EGA65942.1| hypothetical protein VIBR0546_16066 [Vibrio brasiliensis LMG 20546] Length = 200 Score = 37.0 bits (86), Expect = 0.82, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 K DLF G GG L E + E+NP + K + N Sbjct: 62 KCLDLFAGSGG--LGFEAASRQAEMVTL--IELNPSAFKQLEKN 101 >gi|269986188|gb|EEZ92500.1| protein of unknown function Met10 [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 163 Score = 37.0 bits (86), Expect = 0.83, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 11/79 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------FGDI 56 ++ D+FCG+G + + + + + +IN +++ + N I GD Sbjct: 17 RVLDMFCGVGPFTIPIAKIAKN-----VTAIDINKNAIELLKKNIKLNKISNIDYYCGDS 71 Query: 57 AKIKTQDIPDHDVLLAGFP 75 KI D ++ FP Sbjct: 72 KKITKSLEGKFDRVIMNFP 90 >gi|212528896|ref|XP_002144605.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] gi|210074003|gb|EEA28090.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] Length = 2140 Score = 37.0 bits (86), Expect = 0.83, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 11/74 (14%) Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----------DIP-D 66 L++ + + FS+EI Y + NF L+F D ++ + +P Sbjct: 168 LKKLNIPFSFKHLFSAEIVEYKQAYIERNFRPPLLFRDAIELHREFAYTAYGAKRKVPTR 227 Query: 67 HDVLLAGFPCQPFS 80 D+L+AGFPC +S Sbjct: 228 PDLLVAGFPCVDYS 241 >gi|329934923|ref|ZP_08284964.1| hypothetical protein SGM_0676 [Streptomyces griseoaurantiacus M045] gi|329305745|gb|EGG49601.1| hypothetical protein SGM_0676 [Streptomyces griseoaurantiacus M045] Length = 235 Score = 37.0 bits (86), Expect = 0.86, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 16/82 (19%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-----I 56 L++ DLFC GG + + + +I +P GD Sbjct: 9 LRVLDLFCCAGGAAMGYHRAGFQVDG-----CDIADRPR------YPFAYHRGDAPAYLA 57 Query: 57 AKIKTQDIPDHDVLLAGFPCQP 78 I T +I + + A PCQ Sbjct: 58 HLIDTGEIERYAFVHASPPCQS 79 >gi|319777303|ref|YP_004136954.1| c-5 cytosine-specific DNA methylase [Mycoplasma fermentans M64] gi|318038378|gb|ADV34577.1| C-5 cytosine-specific DNA methylase [Mycoplasma fermentans M64] Length = 154 Score = 37.0 bits (86), Expect = 0.86, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 14/19 (73%) Query: 64 IPDHDVLLAGFPCQPFSQA 82 IP D+++A PC+ +S+A Sbjct: 65 IPKPDIIIASPPCESWSRA 83 >gi|145590104|ref|YP_001156701.1| putative methyltransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048510|gb|ABP35137.1| putative methyltransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 196 Score = 37.0 bits (86), Expect = 0.88, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 4/46 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF 47 L+ DLF G G L E + E + + + NF Sbjct: 49 LRCLDLFAGTG--ALGFEAASRGASF--VALLEKDKKAHANLRTNF 90 >gi|298252616|ref|ZP_06976410.1| methylase of polypeptide chain release factors [Gardnerella vaginalis 5-1] gi|297532980|gb|EFH71864.1| methylase of polypeptide chain release factors [Gardnerella vaginalis 5-1] Length = 304 Score = 37.0 bits (86), Expect = 0.89, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 7/50 (14%) Query: 3 KITDLFCGIG--GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 + DL G G G+ + E ++ E +P + + Q NF T Sbjct: 122 TVVDLCAGSGAIGLSIAAEVADAQ-----VWAVEKSPEAFQYLQKNFEET 166 >gi|257870366|ref|ZP_05650019.1| DNA methylase [Enterococcus gallinarum EG2] gi|257804530|gb|EEV33352.1| DNA methylase [Enterococcus gallinarum EG2] Length = 248 Score = 37.0 bits (86), Expect = 0.89, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Query: 52 IFGDIAKIK-TQDIPDHDVLLAGFPCQPFSQA 82 +FGD +P+ D+++A PC+ +S A Sbjct: 51 LFGDNTLFDHLDSLPNPDLIIASPPCESWSVA 82 >gi|88706064|ref|ZP_01103772.1| C-5 cytosine-specific DNA methylase [Congregibacter litoralis KT71] gi|88699778|gb|EAQ96889.1| C-5 cytosine-specific DNA methylase [Congregibacter litoralis KT71] Length = 322 Score = 37.0 bits (86), Expect = 0.89, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 6/54 (11%) Query: 33 SEINPYSVKTYQANFPNTLIFGDIAKIKTQDI------PDHDVLLAGFPCQPFS 80 +++ Y+AN + D+A+ ++ +L PCQPFS Sbjct: 5 VDLDSACRYPYEANNEAVFVEKDVAEFTASELTALFGNARVKILAGCAPCQPFS 58 >gi|281491525|ref|YP_003353505.1| phage protein [Lactococcus lactis subsp. lactis KF147] gi|281491959|ref|YP_003353939.1| phage protein [Lactococcus lactis subsp. lactis KF147] gi|281375243|gb|ADA64756.1| Phage protein [Lactococcus lactis subsp. lactis KF147] gi|281375668|gb|ADA65172.1| Phage protein [Lactococcus lactis subsp. lactis KF147] Length = 257 Score = 37.0 bits (86), Expect = 0.90, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 43 YQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 Y F N +F +P D+++A PC+ +S A Sbjct: 50 YSRLFGNNQLFE-----TLDKLPHPDLIIASPPCESWSVA 84 >gi|167758115|ref|ZP_02430242.1| hypothetical protein CLOSCI_00453 [Clostridium scindens ATCC 35704] gi|167664012|gb|EDS08142.1| hypothetical protein CLOSCI_00453 [Clostridium scindens ATCC 35704] Length = 189 Score = 37.0 bits (86), Expect = 0.91, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 4/43 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 DLF G GGI +E + ++E F E NP ++ + N Sbjct: 45 FLDLFAGSGGI--GIE-ALSRGSMETVF-VEKNPKAMACIKEN 83 >gi|282860871|ref|ZP_06269937.1| hypothetical protein SACTEDRAFT_0482 [Streptomyces sp. ACTE] gi|282564607|gb|EFB70143.1| hypothetical protein SACTEDRAFT_0482 [Streptomyces sp. ACTE] Length = 414 Score = 37.0 bits (86), Expect = 0.93, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 12/65 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDI 56 + DL CGIGG + L + + + +P + + +AN + D+ Sbjct: 121 VADLCCGIGGDAIALARAGIS-----VLAVDRDPLTAQVARANAEALGLQDRIEVRCADV 175 Query: 57 AKIKT 61 +I T Sbjct: 176 TEIDT 180 >gi|237785783|ref|YP_002906488.1| putative DNA methylase [Corynebacterium kroppenstedtii DSM 44385] gi|237758695|gb|ACR17945.1| putative DNA methylase [Corynebacterium kroppenstedtii DSM 44385] Length = 188 Score = 37.0 bits (86), Expect = 0.93, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 16/68 (23%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ DLF G G L LE R + + + +++T + N GD+ Sbjct: 45 RVLDLFAGSG--ALGLEAA--SRGADSVVFVDTDSAAIETIKDN---IRRVGDV------ 91 Query: 63 DIPDHDVL 70 D DV+ Sbjct: 92 ---DADVV 96 >gi|284054848|ref|ZP_06385058.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca] Length = 220 Score = 37.0 bits (86), Expect = 0.95, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 11/15 (73%) Query: 69 VLLAGFPCQPFSQAG 83 +++ G PCQPFS G Sbjct: 1 MIIGGPPCQPFSVGG 15 >gi|315146000|gb|EFT90016.1| conserved hypothetical protein [Enterococcus faecalis TX2141] Length = 266 Score = 37.0 bits (86), Expect = 0.95, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 43 YQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 Y F + +F K+ +P D+++A PC+ +S A Sbjct: 67 YSYMFNDNKLF----KV-LDKLPKPDLIIASPPCESWSVA 101 >gi|315651228|ref|ZP_07904258.1| ribosomal RNA small subunit methyltransferase D [Eubacterium saburreum DSM 3986] gi|315486524|gb|EFU76876.1| ribosomal RNA small subunit methyltransferase D [Eubacterium saburreum DSM 3986] Length = 184 Score = 36.7 bits (85), Expect = 0.97, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI 52 D+F G GGI +E R + + +I+ +V+ + N +T + Sbjct: 44 TFLDMFAGSGGI--GIEAL--SRGAKKAYFCDIDREAVECIKYNLSHTKL 89 >gi|239943647|ref|ZP_04695584.1| hypothetical protein SrosN15_21811 [Streptomyces roseosporus NRRL 15998] gi|239990098|ref|ZP_04710762.1| hypothetical protein SrosN1_22528 [Streptomyces roseosporus NRRL 11379] gi|291447112|ref|ZP_06586502.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291350059|gb|EFE76963.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 408 Score = 36.7 bits (85), Expect = 0.98, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 12/65 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDI 56 + DL CGIGG + L + + + +P + + +AN + D+ Sbjct: 117 VADLCCGIGGDAIALARAGIS-----VLAVDRDPLTAEVARANAEALGLAELIEVRCADV 171 Query: 57 AKIKT 61 +I T Sbjct: 172 TEIDT 176 >gi|147797617|emb|CAN65004.1| hypothetical protein VITISV_023490 [Vitis vinifera] Length = 1255 Score = 36.7 bits (85), Expect = 0.98, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 10/75 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNH-RNVECFF-SSEINPYSVKTYQAN--FPNTLIFGDIAKI 59 + DLFCG G I L L + H E + + + + N T I GD+ KI Sbjct: 400 VLDLFCGTGTIGLTLSRRVRHVYGYEVVAQAV---SDARRNAKLNGICNATFIEGDLNKI 456 Query: 60 KTQ---DIPDHDVLL 71 D P DV++ Sbjct: 457 GENFGKDFPKPDVVI 471 >gi|312134888|ref|YP_004002226.1| sun protein [Caldicellulosiruptor owensensis OL] gi|311774939|gb|ADQ04426.1| sun protein [Caldicellulosiruptor owensensis OL] Length = 423 Score = 36.7 bits (85), Expect = 0.99, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 10/83 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLIFGDIA 57 K+ DL GG + +IN + + + N F N ++ A Sbjct: 248 KVLDLCAAPGG--KTFNCAEVIDGF--VVACDINDHKLDVLRENILRLGFDNIIVAKSDA 303 Query: 58 KI-KTQDIPDHDVLLAGFPCQPF 79 +I D+++A PC F Sbjct: 304 EIFNPDFAGRFDIVIADLPCTGF 326 >gi|224368228|ref|YP_002602391.1| putative small methyltransferase [Desulfobacterium autotrophicum HRM2] gi|223690944|gb|ACN14227.1| putative small methyltransferase [Desulfobacterium autotrophicum HRM2] Length = 189 Score = 36.7 bits (85), Expect = 0.99, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 20/86 (23%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGD 55 ++ DLF G G L LE + + + + N T+I D Sbjct: 44 RVLDLFAGTG--ALGLEALSRNAGFAT--FVDNSREACTVINKNIALLQFEHCTTVIQHD 99 Query: 56 IA------KIKTQDIPDHDVLLAGFP 75 + +I+ + D++ P Sbjct: 100 LTRAGTLARIRPK---KFDLVFMDPP 122 >gi|308235423|ref|ZP_07666160.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gardnerella vaginalis ATCC 14018] Length = 306 Score = 36.7 bits (85), Expect = 0.99, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 18/87 (20%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----------TLI 52 + DL G G I L + + ++ E +P + + Q N+ I Sbjct: 127 VLDLCAGSGAI--GLSVASEVADAQ-VWAVEKSPKAFEYLQKNYNKIAEKYNILNRYHAI 183 Query: 53 FGDIAKIKTQD----IPDHDVLLAGFP 75 GD + + DV++ P Sbjct: 184 LGDATNVNLPEKAAIKEKVDVVITNPP 210 >gi|311114830|ref|YP_003986051.1| protein-(glutamine-N5) methyltransferase [Gardnerella vaginalis ATCC 14019] gi|310946324|gb|ADP39028.1| protein-(glutamine-N5) methyltransferase [Gardnerella vaginalis ATCC 14019] Length = 302 Score = 36.7 bits (85), Expect = 0.99, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 18/87 (20%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----------TLI 52 + DL G G I L + + ++ E +P + + Q N+ I Sbjct: 123 VLDLCAGSGAI--GLSVASEVADAQ-VWAVEKSPKAFEYLQKNYNKIAEKYNILNRYHAI 179 Query: 53 FGDIAKIKTQD----IPDHDVLLAGFP 75 GD + + DV++ P Sbjct: 180 LGDATNVNLPEKAAIKEKVDVVITNPP 206 >gi|307289827|ref|ZP_07569762.1| hypothetical protein HMPREF9509_00144 [Enterococcus faecalis TX0411] gi|306499118|gb|EFM68598.1| hypothetical protein HMPREF9509_00144 [Enterococcus faecalis TX0411] Length = 246 Score = 36.7 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 43 YQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 Y F + +F K+ +P D+++A PC+ +S A Sbjct: 48 YSYMFNDNKLF----KV-LDKLPKPDLIIASPPCESWSVA 82 >gi|224097291|ref|XP_002190665.1| PREDICTED: similar to tRNA methyltransferase 12 homolog [Taeniopygia guttata] Length = 408 Score = 36.7 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 3/42 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA 45 + DL+ GIG L H + E N ++V+ Sbjct: 206 VVDLYAGIGYFTLPF---LVHAGAAFVHACEWNSHAVEALHR 244 >gi|297530735|ref|YP_003672010.1| methyltransferase [Geobacillus sp. C56-T3] gi|297253987|gb|ADI27433.1| methyltransferase [Geobacillus sp. C56-T3] Length = 204 Score = 36.7 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 4/42 (9%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 DLF G GG L +E R +E + + +V+T + N Sbjct: 52 LDLFAGSGG--LGIEAL--SRGIERVIFVDHDRKAVQTVRKN 89 >gi|319766111|ref|YP_004131612.1| methyltransferase [Geobacillus sp. Y412MC52] gi|317110977|gb|ADU93469.1| methyltransferase [Geobacillus sp. Y412MC52] Length = 204 Score = 36.7 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 4/42 (9%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 DLF G GG L +E R +E + + +V+T + N Sbjct: 52 LDLFAGSGG--LGIEAL--SRGIERVIFVDHDRKAVQTVRKN 89 >gi|297159668|gb|ADI09380.1| hypothetical protein SBI_06260 [Streptomyces bingchenggensis BCW-1] Length = 395 Score = 36.7 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 5/44 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 ++ DL CGIGG + + + + +P + +AN Sbjct: 103 RVADLCCGIGGDAVAFARAGI-----PVLAVDRDPLTCAVVRAN 141 >gi|159906053|ref|YP_001549715.1| RNA methyltransferase-like protein [Methanococcus maripaludis C6] gi|159887546|gb|ABX02483.1| RNA methyltransferase related protein [Methanococcus maripaludis C6] Length = 295 Score = 36.7 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 10/71 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIAKI 59 + D FCG G L L + + S+INP+++K + NF + +I Sbjct: 200 VIDGFCGSG--TLGL--AALKKGAKKVIFSDINPHALKDVIYNLKLNFSKEVFER--IEI 253 Query: 60 KTQDIPDHDVL 70 D + DV+ Sbjct: 254 INSDFLNLDVI 264 >gi|326532950|dbj|BAJ89320.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 510 Score = 36.7 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 34/85 (40%), Gaps = 15/85 (17%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54 L++ ++ G+GG + L + ++C S E + + K + + T G Sbjct: 388 LRVLSIYSGVGGAEVALHRLG--IPLKCVVSIEESDVNRKILKRWWAKTEQSGVLRQLPG 445 Query: 55 ------DIAKIKTQDIPDHDVLLAG 73 D+ + ++ D+++ G Sbjct: 446 IWKLKTDVLEDLFKEFGGFDLVVGG 470 >gi|261419295|ref|YP_003252977.1| methyltransferase [Geobacillus sp. Y412MC61] gi|261375752|gb|ACX78495.1| methyltransferase [Geobacillus sp. Y412MC61] Length = 198 Score = 36.7 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 4/42 (9%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 DLF G GG L +E R +E + + +V+T + N Sbjct: 46 LDLFAGSGG--LGIEAL--SRGIERVIFVDHDRKAVQTVRKN 83 >gi|153939582|ref|YP_001391675.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum F str. Langeland] gi|152935478|gb|ABS40976.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum F str. Langeland] gi|295319706|gb|ADG00084.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum F str. 230613] Length = 476 Score = 36.7 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 17/91 (18%) Query: 2 LK--ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFGD 55 +K I D F G GG +E S +I +P ++ ++ N P T + + Sbjct: 1 MKELIIDNFAGGGGASTGIELATGR-------SVDIAINHDPAAILMHKTNHPATKHYCE 53 Query: 56 -IAKIKTQDI---PDHDVLLAGFPCQPFSQA 82 + ++ + + C+ FS+A Sbjct: 54 SVWEVDPVEAVGNNKVALAWFSPDCKHFSKA 84 >gi|302384869|ref|YP_003820691.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium saccharolyticum WM1] gi|302195497|gb|ADL03068.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium saccharolyticum WM1] Length = 288 Score = 36.7 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 M KI DL G G I + L + + +++I+ ++ + N L G I +K Sbjct: 119 MPKILDLCTGSGCIAISLAKLG---GFDRVTAADISEEALLVAERNAGKHLGEGRITLVK 175 Query: 61 TQDI------PDHDVLLAGFP 75 + DV+++ P Sbjct: 176 SDLFEAFKNQRTFDVIVSNPP 196 >gi|297192642|ref|ZP_06910040.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197723134|gb|EDY67042.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length = 424 Score = 36.7 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 12/66 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDI 56 + DL GIGG + L + + + +P + + +AN + D+ Sbjct: 137 VADLCSGIGGDAIALARAGIS-----VLAVDRDPLTAEVARANAEALGLSGLVEVRCADV 191 Query: 57 AKIKTQ 62 I T Sbjct: 192 TDIDTS 197 >gi|163803407|ref|ZP_02197282.1| hypothetical protein 1103602000602_AND4_16474 [Vibrio sp. AND4] gi|159172811|gb|EDP57656.1| hypothetical protein AND4_16474 [Vibrio sp. AND4] Length = 206 Score = 36.7 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 5/62 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF G GG L E E E+NP + + Q N +L +I + T Sbjct: 62 KCLDLFAGSGG--LGFESASRQA--EQVTMIELNPQAFQQLQKN-VASLNANNIQIVNTD 116 Query: 63 DI 64 I Sbjct: 117 AI 118 >gi|71747010|ref|XP_822560.1| hypothetical protein [Trypanosoma brucei TREU927] gi|70832228|gb|EAN77732.1| hypothetical protein, conserved [Trypanosoma brucei] Length = 394 Score = 36.7 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 12/85 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDI 56 + D+F GIG L L + V+ + E N YS N + GD Sbjct: 231 VVDMFAGIGYFTLPL---AINGGVKIVHALEKNKYSALYLAFNAVQNKVSDLIVIHCGDN 287 Query: 57 AKIKTQDIPDHDVLLAG--FPCQPF 79 + ++ D ++ G C+ F Sbjct: 288 RDVGSELCGRCDRVIMGYIPSCESF 312 >gi|163858288|ref|YP_001632586.1| putative N6-adenine-specific methyltransferase [Bordetella petrii DSM 12804] gi|163262016|emb|CAP44318.1| putative N6-adenine-specific methyltransferase [Bordetella petrii] Length = 220 Score = 36.7 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 4/43 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA 45 ++ DLF G G L E R E + +V +A Sbjct: 85 RVLDLFAGSG--ALGFEAA--SRGATQVLLVEHDRTAVAALRA 123 >gi|331085068|ref|ZP_08334155.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408768|gb|EGG88233.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 189 Score = 36.7 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 4/51 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53 + DLF G GGI +E E F E NP ++ + N T + Sbjct: 44 RFLDLFAGSGGI--GIEALSRGAG-EAVF-VEQNPKAMACIKENLKKTKLE 90 >gi|325661177|ref|ZP_08149804.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium 4_1_37FAA] gi|325472684|gb|EGC75895.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium 4_1_37FAA] Length = 189 Score = 36.7 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 4/51 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53 + DLF G GGI +E E F E NP ++ + N T + Sbjct: 44 RFLDLFAGSGGI--GIEALSRGAG-EAVF-VEQNPKAMACIKENLKKTKLE 90 >gi|212529036|ref|XP_002144675.1| RNA methylase family protein, putative [Penicillium marneffei ATCC 18224] gi|210074073|gb|EEA28160.1| RNA methylase family protein, putative [Penicillium marneffei ATCC 18224] Length = 242 Score = 36.7 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 13/82 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFGD- 55 + D F G GG + ++ + ++ E NP + + N T GD Sbjct: 78 LIDAFAGAGGNSIAFAKSGRWKR---VYAIEKNPAVLTCAKHNAKIYGVESKITWFEGDC 134 Query: 56 --IAKIKTQDIPDHDVLLAGFP 75 I K +D+ + V+ A P Sbjct: 135 FEILKTHLKDLGPYSVVFASPP 156 >gi|70991803|ref|XP_750750.1| RNA methylase family protein [Aspergillus fumigatus Af293] gi|66848383|gb|EAL88712.1| RNA methylase family protein, putative [Aspergillus fumigatus Af293] gi|159124312|gb|EDP49430.1| RNA methylase family protein, putative [Aspergillus fumigatus A1163] Length = 238 Score = 36.7 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 13/82 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFGD- 55 + D F G GG + +T + ++ E NP ++ + N T GD Sbjct: 78 LVDAFAGAGGNTIAFARTGKWKR---VYAIEKNPAVLQCAKHNAQVYGVADKITWFEGDC 134 Query: 56 --IAKIKTQDIPDHDVLLAGFP 75 I K + +++ + V+ A P Sbjct: 135 FSILKNQLKELAPYSVIFASPP 156 >gi|225442369|ref|XP_002276511.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297743126|emb|CBI35993.3| unnamed protein product [Vitis vinifera] Length = 570 Score = 36.7 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 10/75 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNH-RNVECFF-SSEINPYSVKTYQAN--FPNTLIFGDIAKI 59 + DLFCG G I L L + H E + + + + N T I GD+ KI Sbjct: 419 VLDLFCGTGTIGLTLSRRVRHVYGYEVVAQAV---SDARRNAKLNGICNATFIEGDLNKI 475 Query: 60 KTQ---DIPDHDVLL 71 D P DV++ Sbjct: 476 GENFGKDFPKPDVVI 490 >gi|238501564|ref|XP_002382016.1| RNA methylase family protein, putative [Aspergillus flavus NRRL3357] gi|220692253|gb|EED48600.1| RNA methylase family protein, putative [Aspergillus flavus NRRL3357] Length = 252 Score = 36.7 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 13/84 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---FP----NTLIFG 54 + + D F G GG + ++ + ++ E NP ++ + N + T G Sbjct: 89 MVLVDAFAGAGGNTIAFARSGRWKR---VYAIEKNPAVLQCAKHNAKIYGVEDKITWFEG 145 Query: 55 D---IAKIKTQDIPDHDVLLAGFP 75 D I + +D+ + VL A P Sbjct: 146 DSLQIVNNQLKDLGPYSVLFASPP 169 >gi|312899542|ref|ZP_07758870.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|311293311|gb|EFQ71867.1| conserved hypothetical protein [Enterococcus faecalis TX0470] Length = 254 Score = 36.7 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 43 YQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 Y F + +F K+ +P D+++A PC+ +S A Sbjct: 55 YSYMFNDNKLF----KV-LDKLPKPDLIIASPPCESWSVA 89 >gi|254230124|ref|ZP_04923520.1| putative methyltransferase [Vibrio sp. Ex25] gi|151937369|gb|EDN56231.1| putative methyltransferase [Vibrio sp. Ex25] Length = 246 Score = 36.7 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 K DLF G GG L E E E+NP + + Q N Sbjct: 109 KCLDLFAGSGG--LGFESASRQA--EQVTMVELNPQAFQQLQKN 148 >gi|91227503|ref|ZP_01261840.1| hypothetical protein V12G01_09647 [Vibrio alginolyticus 12G01] gi|269968644|ref|ZP_06182641.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91188527|gb|EAS74819.1| hypothetical protein V12G01_09647 [Vibrio alginolyticus 12G01] gi|269826731|gb|EEZ81068.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 199 Score = 36.7 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 K DLF G GG L E E E+NP + + Q N Sbjct: 62 KCLDLFAGSGG--LGFESASRQA--EQVTMVELNPQAFQQLQKN 101 >gi|262392911|ref|YP_003284765.1| ribosomal RNA small subunit methyltransferase D [Vibrio sp. Ex25] gi|262336505|gb|ACY50300.1| ribosomal RNA small subunit methyltransferase D [Vibrio sp. Ex25] Length = 199 Score = 36.7 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 K DLF G GG L E E E+NP + + Q N Sbjct: 62 KCLDLFAGSGG--LGFESASRQA--EQVTMVELNPQAFQQLQKN 101 >gi|224372530|ref|YP_002606902.1| N6-adenine-specific methylase [Nautilia profundicola AmH] gi|223589616|gb|ACM93352.1| N6-adenine-specific methylase [Nautilia profundicola AmH] Length = 192 Score = 36.7 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 16/68 (23%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 ++F G+G + LE R + + E +P + + + N I + D Sbjct: 51 VEMFSGVG--SIGLEAI--SRGAKKAYFLEKDPEAARVLKKN------------IDSMDP 94 Query: 65 PDHDVLLA 72 +++L Sbjct: 95 EKCEIILG 102 >gi|119469769|ref|XP_001257977.1| RNA methylase family protein, putative [Neosartorya fischeri NRRL 181] gi|119406129|gb|EAW16080.1| RNA methylase family protein, putative [Neosartorya fischeri NRRL 181] Length = 238 Score = 36.7 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 13/82 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFGD- 55 + D F G GG + +T + ++ E NP ++ + N T GD Sbjct: 78 LVDAFAGAGGNTIAFARTGKWKR---VYAIEKNPAVLQCAKHNAQVYGVADKITWFEGDC 134 Query: 56 --IAKIKTQDIPDHDVLLAGFP 75 I K + +++ + V+ A P Sbjct: 135 FSILKDQLKELAPYSVIFASPP 156 >gi|54025403|ref|YP_119645.1| putative methyltransferase [Nocardia farcinica IFM 10152] gi|54016911|dbj|BAD58281.1| putative methyltransferase [Nocardia farcinica IFM 10152] Length = 263 Score = 36.7 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 6/77 (7%) Query: 4 ITDLFCGIGGIRLDL--EQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDIAKI 59 + DL CG G + L E + R VE + +++P +V + N T+ GD+ Sbjct: 98 VVDLCCGCGALGLAFATEMRAHGRTVELTAA-DVDPTAVCCARGNLAGHGTVHEGDLFDA 156 Query: 60 KTQDIP-DHDVLLAGFP 75 D+ D+LLA P Sbjct: 157 LPTDLRGRIDILLANVP 173 >gi|169769126|ref|XP_001819033.1| RNA methylase family protein [Aspergillus oryzae RIB40] gi|83766891|dbj|BAE57031.1| unnamed protein product [Aspergillus oryzae] Length = 240 Score = 36.7 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 13/84 (15%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---FP----NTLIFG 54 + + D F G GG + ++ + ++ E NP ++ + N + T G Sbjct: 77 MVLVDAFAGAGGNTIAFARSGRWKR---VYAIEKNPAVLQCAKHNAKIYGVEDKITWFEG 133 Query: 55 D---IAKIKTQDIPDHDVLLAGFP 75 D I + +D+ + VL A P Sbjct: 134 DSLQIVNNQLKDLGPYSVLFASPP 157 >gi|52549034|gb|AAU82883.1| predicted methyltransferase [uncultured archaeon GZfos22D9] Length = 367 Score = 36.7 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 9/62 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIFGDIA 57 I D+F G+G + Q + +INP +++ N I GD++ Sbjct: 193 IIDMFAGVGSFSI---QIAKRAPQSIVTAIDINPDAIRYLHENMELNGVRNIEPIEGDVS 249 Query: 58 KI 59 I Sbjct: 250 GI 251 >gi|240047619|ref|YP_002961007.1| Cytosine-specific methyltransferase [Mycoplasma conjunctivae HRC/581] gi|239985191|emb|CAT05204.1| Cytosine-specific methyltransferase [Mycoplasma conjunctivae] Length = 409 Score = 36.3 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%) Query: 48 PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 PN I DI D D+L FPCQ S G Sbjct: 112 PNNYI-SDIKNHNQPLPKDIDILTYSFPCQDISNMG 146 >gi|296812885|ref|XP_002846780.1| WW domain-containing protein [Arthroderma otae CBS 113480] gi|238842036|gb|EEQ31698.1| WW domain-containing protein [Arthroderma otae CBS 113480] Length = 238 Score = 36.3 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 13/82 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFGD- 55 + D F G GG + ++ + ++ E +P +++ + N T GD Sbjct: 75 LIDTFAGAGGNTIAFAKSNRWKR---VYAIEKDPETLRCAKHNAELYGVGDKITWFLGDC 131 Query: 56 --IAKIKTQDIPDHDVLLAGFP 75 I + + +D+ + V+ P Sbjct: 132 FEILQNQLKDLAPYSVIFGSPP 153 >gi|322792109|gb|EFZ16181.1| hypothetical protein SINV_14765 [Solenopsis invicta] Length = 298 Score = 36.3 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 3/36 (8%) Query: 48 PNTLIFGDIAKIKTQDIP---DHDVLLAGFPCQPFS 80 P T GD Q +P + +++ G PCQ FS Sbjct: 122 PLTNRNGDQVDNNGQKLPQKGEVELICGGPPCQGFS 157 >gi|12276114|gb|AAG50268.1|AF311661_1 probable DNA cytosine methylase [Phage GMSE-1] Length = 91 Score = 36.3 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 31/84 (36%) Query: 31 FSSEINPYSVKTYQANF-PNTLIFGDIAKIKTQDIPDHDV-------------------L 70 + +EI+PY+ + + + GD+ + +D+ D+ Sbjct: 4 YYNEIDPYAAQWLRNLIVAGHIAEGDVDERSIEDVKPDDLKSYTQCHFFAGMGVWSYALA 63 Query: 71 LAGFP-----------CQPFSQAG 83 LAG+P CQPFS+AG Sbjct: 64 LAGWPDNKPVWTRSCTCQPFSRAG 87 >gi|255074621|ref|XP_002500985.1| predicted protein [Micromonas sp. RCC299] gi|226516248|gb|ACO62243.1| predicted protein [Micromonas sp. RCC299] Length = 473 Score = 36.3 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 10/74 (13%) Query: 4 ITDLFCGIGGIRLDL---EQTFNHRNVECFFSSEINPYSVKTYQAN--FPNTLIFGDIAK 58 + DLFCG+G L L ++ + E E + + +AN T GD+AK Sbjct: 328 VLDLFCGVG--TLGLCVAKKAKHVFGWEVV--PEAVKDAERNAEANGITNATFRRGDLAK 383 Query: 59 IKTQDIPDHDVLLA 72 +K +P D+++A Sbjct: 384 LKAS-LPGPDIVIA 396 >gi|296242730|ref|YP_003650217.1| hypothetical protein Tagg_0995 [Thermosphaera aggregans DSM 11486] gi|296095314|gb|ADG91265.1| protein of unknown function Met10 [Thermosphaera aggregans DSM 11486] Length = 327 Score = 36.3 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 4/43 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF GIGG L + ++++NP + + N Sbjct: 178 VVDLFSGIGGFPLHIASLKTAL----VLANDLNPTAHELLMEN 216 >gi|149194071|ref|ZP_01871169.1| hypothetical protein CMTB2_03263 [Caminibacter mediatlanticus TB-2] gi|149136024|gb|EDM24502.1| hypothetical protein CMTB2_03263 [Caminibacter mediatlanticus TB-2] Length = 196 Score = 36.3 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 13/68 (19%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 ++F G+G + LE R + + E +P + K + N I +K +D Sbjct: 51 VEVFSGVG--SIGLEAI--SRGAKKAYFLEKDPEAAKVLKRN---------IDSLKEEDK 97 Query: 65 PDHDVLLA 72 +++L Sbjct: 98 EKCEIILG 105 >gi|45358551|ref|NP_988108.1| RNA methyltransferase-like protein [Methanococcus maripaludis S2] gi|44921309|emb|CAF30544.1| RNA methyltransferase related protein [Methanococcus maripaludis S2] Length = 295 Score = 36.3 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 10/71 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIAKI 59 + D FCG G L L + + S+INP+++K + NF + D +I Sbjct: 200 VVDGFCGSG--TLGL--AALKKGAKKVIFSDINPHALKDVIYNLKLNFSKEVF--DRIEI 253 Query: 60 KTQDIPDHDVL 70 D + D++ Sbjct: 254 INSDFLNLDIV 264 >gi|16081974|ref|NP_394384.1| hypothetical protein Ta0926 [Thermoplasma acidophilum DSM 1728] gi|10640203|emb|CAC12055.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 329 Score = 36.3 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + D+F GIG L + + N F+ +INP ++ + N Sbjct: 182 TVLDMFSGIGYFALPVAKYGNPMR---IFACDINPDAIHYLKEN 222 >gi|225156532|ref|ZP_03724866.1| Site-specific DNA methylase-like protein [Opitutaceae bacterium TAV2] gi|224802860|gb|EEG21108.1| Site-specific DNA methylase-like protein [Opitutaceae bacterium TAV2] Length = 255 Score = 36.3 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 24/79 (30%), Gaps = 20/79 (25%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF G L L + F P+ + GD+ Sbjct: 7 VLSLFPGA---DL-LGRGFEAEGFCVV---------------RGPDLVWGGDVRTFHAPS 47 Query: 64 IPDHDVLLAGFPCQPFSQA 82 ++ G PCQ FS+A Sbjct: 48 -GAFGGIIGGPPCQDFSRA 65 >gi|47222420|emb|CAG12940.1| unnamed protein product [Tetraodon nigroviridis] Length = 775 Score = 36.3 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 3/31 (9%) Query: 54 GDIAKIKTQDIPD---HDVLLAGFPCQPFSQ 81 GD+ + + I + D+++ G PC S Sbjct: 548 GDVRNVTRKHIEEWGPFDLVIGGSPCNDLSI 578 >gi|294012545|ref|YP_003546005.1| tRNA/rRNA cytosine-C5-methylase [Sphingobium japonicum UT26S] gi|292675875|dbj|BAI97393.1| tRNA/rRNA cytosine-C5-methylase [Sphingobium japonicum UT26S] Length = 391 Score = 36.3 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV 27 + + DL G GG L L + V Sbjct: 201 MTVIDLCAGAGGKTLALAAAMGGKGV 226 >gi|225155057|ref|ZP_03723553.1| Site-specific DNA methylase-like protein [Opitutaceae bacterium TAV2] gi|224804227|gb|EEG22454.1| Site-specific DNA methylase-like protein [Opitutaceae bacterium TAV2] Length = 255 Score = 36.3 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 26/81 (32%), Gaps = 24/81 (29%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + LF G L L + F P+ + GD+ Sbjct: 7 VLSLFPGA---DL-LGRGFEAEGFCVV---------------RGPDLVWGGDVRTF---H 44 Query: 64 IPD--HDVLLAGFPCQPFSQA 82 +P ++ G PCQ FS+A Sbjct: 45 VPPGAFGGIIGGPPCQDFSRA 65 >gi|242764673|ref|XP_002340822.1| RNA methylase family protein, putative [Talaromyces stipitatus ATCC 10500] gi|218724018|gb|EED23435.1| RNA methylase family protein, putative [Talaromyces stipitatus ATCC 10500] Length = 242 Score = 36.3 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 13/82 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFGD- 55 + D F G GG + ++ + ++ E +P + + N T GD Sbjct: 78 LIDAFAGAGGNSIAFAKSGRWKR---VYAIEKDPAVLACAKHNAKIYGVQSKITWFEGDC 134 Query: 56 --IAKIKTQDIPDHDVLLAGFP 75 I K +D+ + V+ A P Sbjct: 135 FEILKTHLKDLGFYSVVFASPP 156 >gi|210610944|ref|ZP_03288669.1| hypothetical protein CLONEX_00859 [Clostridium nexile DSM 1787] gi|210152244|gb|EEA83251.1| hypothetical protein CLONEX_00859 [Clostridium nexile DSM 1787] Length = 278 Score = 36.3 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 66 DHDVLLAGFPCQPFSQAG 83 + D+L G PCQ FS AG Sbjct: 14 ELDLLSGGAPCQAFSYAG 31 >gi|331270910|ref|YP_004385621.1| putative cytosine-specific DNA methylotransferase [Clostridium botulinum BKT015925] gi|329127302|gb|AEB77246.1| putative cytosine-specific DNA methylotransferase [Clostridium botulinum BKT015925] Length = 70 Score = 36.3 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY 43 +++ D F GIG + L+ +E SEI+ ++ +Y Sbjct: 9 IRLFDSFAGIGALHKALKNIG--VEIELVGMSEIDVDAIISY 48 >gi|78044003|ref|YP_360292.1| putative methyltransferase [Carboxydothermus hydrogenoformans Z-2901] gi|77996118|gb|ABB15017.1| putative methyltransferase [Carboxydothermus hydrogenoformans Z-2901] Length = 184 Score = 36.3 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 27/79 (34%), Gaps = 11/79 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDI 56 + D F G G L LE R + + E + + + N N I GDI Sbjct: 45 VLDGFAGTG--NLGLEAL--SRGAKFSYFIEADREAFSCLRRNIENLGYGDRAKAILGDI 100 Query: 57 AKIKTQDIPDHDVLLAGFP 75 KI D++ P Sbjct: 101 FKILPHINEKFDLIFLDPP 119 >gi|28899731|ref|NP_799336.1| hypothetical protein VP2957 [Vibrio parahaemolyticus RIMD 2210633] gi|153840067|ref|ZP_01992734.1| putative methyltransferase [Vibrio parahaemolyticus AQ3810] gi|260361294|ref|ZP_05774399.1| RNA methyltransferase, RsmD family [Vibrio parahaemolyticus K5030] gi|260879108|ref|ZP_05891463.1| RNA methyltransferase, RsmD family [Vibrio parahaemolyticus AN-5034] gi|260897984|ref|ZP_05906480.1| RNA methyltransferase, RsmD family [Vibrio parahaemolyticus Peru-466] gi|260899651|ref|ZP_05908046.1| RNA methyltransferase, RsmD family [Vibrio parahaemolyticus AQ4037] gi|28807983|dbj|BAC61220.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|149746339|gb|EDM57394.1| putative methyltransferase [Vibrio parahaemolyticus AQ3810] gi|308087169|gb|EFO36864.1| RNA methyltransferase, RsmD family [Vibrio parahaemolyticus Peru-466] gi|308089651|gb|EFO39346.1| RNA methyltransferase, RsmD family [Vibrio parahaemolyticus AN-5034] gi|308106733|gb|EFO44273.1| RNA methyltransferase, RsmD family [Vibrio parahaemolyticus AQ4037] gi|308111828|gb|EFO49368.1| RNA methyltransferase, RsmD family [Vibrio parahaemolyticus K5030] gi|328472442|gb|EGF43308.1| hypothetical protein VP10329_00373 [Vibrio parahaemolyticus 10329] Length = 199 Score = 36.3 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 K DLF G GG L E E E+NP + + Q N Sbjct: 62 KCLDLFAGSGG--LGFESASRQA--ELVTMIELNPQAFQQLQKN 101 >gi|291551321|emb|CBL27583.1| DNA-methyltransferase (dcm) [Ruminococcus torques L2-14] Length = 595 Score = 36.3 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 3/47 (6%) Query: 40 VKTYQANF--PNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83 +Y AN+ + ++A + + D+ + G PCQ FS G Sbjct: 258 KASYMANYNIKDEQFHWNVAFLNGKQYAGQVDLFVGGSPCQSFSLVG 304 >gi|124027599|ref|YP_001012920.1| methyltransferase [Hyperthermus butylicus DSM 5456] gi|123978293|gb|ABM80574.1| Methyltransferase [Hyperthermus butylicus DSM 5456] Length = 349 Score = 36.3 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY 43 + D+F G GG L + + R +++ NP+++ T Sbjct: 196 TVLDMFAGWGGFPLVISKLGRAR---LVVANDANPWAIATL 233 >gi|67463853|pdb|1VE3|A Chain A, Crystal Structure Of Ph0226 Protein From Pyrococcus Horikoshii Ot3 gi|67463854|pdb|1VE3|B Chain B, Crystal Structure Of Ph0226 Protein From Pyrococcus Horikoshii Ot3 Length = 227 Score = 36.3 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 13/76 (17%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY----SVKTYQANFPNTLIF--GDI 56 K+ DL CG+GG LE E +I+ + + Y + + + F GD Sbjct: 41 KVLDLACGVGGFSFLLE----DYGFEVVG-VDISEDXIRKARE-YAKSRESNVEFIVGDA 94 Query: 57 AKIKTQDIPDHDVLLA 72 K+ +D D ++ Sbjct: 95 RKLSFED-KTFDYVIF 109 >gi|14590157|ref|NP_142222.1| hypothetical protein PH0226 [Pyrococcus horikoshii OT3] gi|3256615|dbj|BAA29298.1| 227aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 227 Score = 36.3 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 13/76 (17%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY----SVKTYQANFPNTLIF--GDI 56 K+ DL CG+GG LE E +I+ + + Y + + + F GD Sbjct: 41 KVLDLACGVGGFSFLLE----DYGFEVVG-VDISEDMIRKARE-YAKSRESNVEFIVGDA 94 Query: 57 AKIKTQDIPDHDVLLA 72 K+ +D D ++ Sbjct: 95 RKLSFED-KTFDYVIF 109 >gi|149008047|ref|ZP_01831595.1| C-5 cytosine-specific DNA methylase [Streptococcus pneumoniae SP18-BS74] gi|21538805|emb|CAD35757.1| putative C5-methylase [Streptococcus phage VO1] gi|147760455|gb|EDK67432.1| C-5 cytosine-specific DNA methylase [Streptococcus pneumoniae SP18-BS74] Length = 267 Score = 36.3 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 43 YQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 Y F + +F +P D+++A PC+ +S A Sbjct: 57 YSRLFGDNKLFD-----TLDKLPHPDLIIASPPCESWSNA 91 >gi|328884483|emb|CCA57722.1| SAM-dependent methyltransferases [Streptomyces venezuelae ATCC 10712] Length = 410 Score = 36.3 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 6/65 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + DL GIGG + L + + + +P + + +AN L G++ +++ D Sbjct: 120 VADLCSGIGGDAIALARAGIS-----VLAVDRDPLTAEVARAN-AEALGLGELIEVRCAD 173 Query: 64 IPDHD 68 + + D Sbjct: 174 VAEID 178 >gi|302543276|ref|ZP_07295618.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302460894|gb|EFL23987.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length = 393 Score = 36.3 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 12/67 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDI 56 + DL CGIGG + + + + + +P + +AN + D+ Sbjct: 104 VADLCCGIGGDAIAMARAGLS-----VLAVDRDPLTCAVARANADALGLSQLIEVRCADV 158 Query: 57 AKIKTQD 63 I T Sbjct: 159 TGIDTSS 165 >gi|57642070|ref|YP_184548.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus kodakarensis KOD1] gi|57160394|dbj|BAD86324.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus kodakarensis KOD1] Length = 417 Score = 35.9 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 9/46 (19%) Query: 3 KITDLFCGIG--GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 K+ DL+ G+G GI L ++ F + EINP++V+ + N Sbjct: 280 KVLDLYSGVGTFGIYLA-KRGFKVEGI------EINPFAVEMAKKN 318 >gi|266623325|ref|ZP_06116260.1| RNA methyltransferase, RsmD family [Clostridium hathewayi DSM 13479] gi|288864902|gb|EFC97200.1| RNA methyltransferase, RsmD family [Clostridium hathewayi DSM 13479] Length = 187 Score = 35.9 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 12/71 (16%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 DLF G GGI +E R + E+NP + + + N K + Sbjct: 44 TFLDLFSGSGGI--GIEAL--SRGADRAVFIEMNPKAAECIRENLQT-------TKFTDE 92 Query: 63 DI-PDHDVLLA 72 I + DVL Sbjct: 93 SIVMNCDVLTG 103 >gi|261250006|ref|ZP_05942583.1| ribosomal RNA small subunit methyltransferase D [Vibrio orientalis CIP 102891] gi|260939510|gb|EEX95495.1| ribosomal RNA small subunit methyltransferase D [Vibrio orientalis CIP 102891] Length = 199 Score = 35.9 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 K DLF G GG L E + E+NP + K Q N Sbjct: 62 KCLDLFAGSGG--LGFEAASRQAEMVTL--IELNPQAFKQLQTN 101 >gi|284050005|ref|ZP_06380215.1| DNA (cytosine-5-)-methyltransferase [Arthrospira platensis str. Paraca] Length = 321 Score = 35.9 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 10/18 (55%) Query: 66 DHDVLLAGFPCQPFSQAG 83 +++ G PCQ FS G Sbjct: 5 HINLICGGPPCQGFSTIG 22 >gi|78485003|ref|YP_390928.1| C-5 cytosine-specific DNA methylase [Thiomicrospira crunogena XCL-2] gi|78363289|gb|ABB41254.1| C-5 cytosine-specific DNA methylase [Thiomicrospira crunogena XCL-2] Length = 648 Score = 35.9 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 28/105 (26%), Gaps = 33/105 (31%) Query: 7 LFCGIGGIRLDLEQTFNHRN-----VECFFSSEINPYSVK-------------------T 42 LFCG+GG C + + +++ Sbjct: 11 LFCGLGGGAKGFNMGQAKVGQVEAEFRCIGGIDSDAAAIQDFNQLAGAKGTVMDLFDASQ 70 Query: 43 YQANFPNTLIFG-------DIAKIKTQDIPDHDVLLAGFPCQPFS 80 Y + DI + + P+ ++ PC+ FS Sbjct: 71 YLDWHGHLPPEDWKEATPEDIRRAAGYERPN--IVFTSPPCKGFS 113 >gi|213972167|ref|ZP_03400254.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato T1] gi|302063826|ref|ZP_07255367.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato K40] gi|302134027|ref|ZP_07260017.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923077|gb|EEB56685.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato T1] Length = 471 Score = 35.9 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 9/89 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN---PYSVKTYQAN---FPNT--LIFGD 55 + LF G G + + ++ F I Y + + N + +T I D Sbjct: 136 VCSLFHGGGVLDRAIHAGLARSGIDTFVRIGIELEGQYLDASLRNNPMLWRDTSFAICAD 195 Query: 56 IAKI-KTQDIPDHDVLLAGFPCQPFSQAG 83 + + + P D+++AG PC S+AG Sbjct: 196 VRDVQRGTGTPVCDLVVAGIPCTGASRAG 224 >gi|289580575|ref|YP_003479041.1| hypothetical protein Nmag_0895 [Natrialba magadii ATCC 43099] gi|289530128|gb|ADD04479.1| protein of unknown function Met10 [Natrialba magadii ATCC 43099] Length = 366 Score = 35.9 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 12/66 (18%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDI 56 + D+F G+G F +R EC ++NP +++ + N T I D+ Sbjct: 218 VFDMFAGVG----PFVIPFANRGAECVG-VDVNPDAIEYLRENARRNGVADRVTAICDDV 272 Query: 57 AKIKTQ 62 + ++ Sbjct: 273 RDVSSE 278 >gi|46579942|ref|YP_010750.1| methyltransferase [Desulfovibrio vulgaris str. Hildenborough] gi|120602644|ref|YP_967044.1| methyltransferase [Desulfovibrio vulgaris DP4] gi|46449358|gb|AAS96009.1| methyltransferase, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120562873|gb|ABM28617.1| putative methyltransferase [Desulfovibrio vulgaris DP4] gi|311234060|gb|ADP86914.1| methyltransferase [Desulfovibrio vulgaris RCH1] Length = 190 Score = 35.9 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 ++ DLF G G L E R + + E+N + + N Sbjct: 47 RVLDLFAGSG--SLAFEAL--SRGADEAWFVELNAKAAACIEKN 86 >gi|312866067|ref|ZP_07726288.1| RNA methyltransferase, RsmD family [Streptococcus downei F0415] gi|311098471|gb|EFQ56694.1| RNA methyltransferase, RsmD family [Streptococcus downei F0415] Length = 179 Score = 35.9 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 21/85 (24%) Query: 3 KITDLFCGIGGIRL-----DLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PN--T 50 ++ DL+ G GG+ + +EQ E + + +AN P+ Sbjct: 44 RVLDLYAGSGGLSIEAISRGMEQAVL---------VERDRRAQAVIEANIQMTQAPDQFH 94 Query: 51 LIFGDIAKIKTQDIPDHDVLLAGFP 75 L+ D ++ D++L P Sbjct: 95 LLKRDARQVLPTLTGQFDLVLLDPP 119 >gi|156057367|ref|XP_001594607.1| hypothetical protein SS1G_04414 [Sclerotinia sclerotiorum 1980] gi|154702200|gb|EDO01939.1| hypothetical protein SS1G_04414 [Sclerotinia sclerotiorum 1980 UF-70] Length = 257 Score = 35.9 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 29/86 (33%), Gaps = 19/86 (22%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKIK 60 I DLF G GG + ++R + E +P + + N I+G +I + Sbjct: 99 TIIDLFAGAGGNSIAF--ALSNRWAHII-AIEKDPSVIACAENN---AYIYGATNINWVN 152 Query: 61 TQDI-----------PDHDVLLAGFP 75 P V+ A P Sbjct: 153 GDCFEYLKTHASSINPSETVIFASPP 178 >gi|148377669|ref|YP_001256545.1| hypothetical protein MAG_4030 [Mycoplasma agalactiae PG2] gi|148291715|emb|CAL59101.1| Conserved hypothetical protein [Mycoplasma agalactiae PG2] Length = 186 Score = 35.9 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 13/19 (68%) Query: 64 IPDHDVLLAGFPCQPFSQA 82 +P D++LA PC+ FS A Sbjct: 1 MPKPDIILASPPCESFSMA 19 >gi|33322745|gb|AAQ07107.1|AF496419_1 cytosine-specific DNA methyltransferase [Lactobacillus delbrueckii subsp. lactis] Length = 138 Score = 35.9 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 12/17 (70%) Query: 66 DHDVLLAGFPCQPFSQA 82 + D++ G PCQ FS+A Sbjct: 28 EVDMVXGGPPCQGFSEA 44 >gi|325180064|emb|CCA14465.1| RAC family serine/threonineprotein kinase putative [Albugo laibachii Nc14] Length = 1140 Score = 35.9 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 17/46 (36%), Gaps = 4/46 (8%) Query: 17 DLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKT 61 NH E S + + + K Y+ NF P+ DI + Sbjct: 1063 GGHNIMNHAFFE---SIDWDKLARKEYKPNFVPDVSSVDDITNVPE 1105 >gi|94986727|ref|YP_594660.1| N6-adenine-specific methylase [Lawsonia intracellularis PHE/MN1-00] gi|94730976|emb|CAJ54339.1| N6-adenine-specific methylase [Lawsonia intracellularis PHE/MN1-00] Length = 190 Score = 35.9 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 4/61 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 I DLF G G L E R E NP +V+ N +F ++ ++ Sbjct: 48 ILDLFAGSG--SLGFEAI--SRGAAEVCFIENNPKAVQCLYKNIEKLRLFEQVSVVEQDV 103 Query: 64 I 64 I Sbjct: 104 I 104 >gi|188997006|ref|YP_001931257.1| methyltransferase small [Sulfurihydrogenibium sp. YO3AOP1] gi|188932073|gb|ACD66703.1| methyltransferase small [Sulfurihydrogenibium sp. YO3AOP1] Length = 388 Score = 35.9 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 16/86 (18%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI--------NPYSVKTYQANFPNTLIF 53 K+ DLFC GG + + E +I + N+ ++ Sbjct: 219 FKVLDLFCNAGGFGI----HGGKKGAEFIKFVDISSFALSQVEENARLNNLKNY--EIVK 272 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPF 79 D+ ++ +D+++ P PF Sbjct: 273 DDVFDFLKKEKDKYDLIILDPP--PF 296 >gi|197106627|ref|YP_002132004.1| N6-adenine-specific methylase [Phenylobacterium zucineum HLK1] gi|196480047|gb|ACG79575.1| N6-adenine-specific methylase [Phenylobacterium zucineum HLK1] Length = 187 Score = 35.9 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 4/53 (7%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 L++ DLF G G L E C F E + + + N +FG Sbjct: 48 LRVIDLFAGSG--ALGFEALSRGAAF-CLF-VETDEAARGAIRENVDGMGLFG 96 >gi|152969948|ref|YP_001335057.1| putative site-specific DNA methylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150954797|gb|ABR76827.1| putative site-specific DNA methylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 619 Score = 35.9 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 31/87 (35%), Gaps = 15/87 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI----NPYSVKTYQANFPNTLIFGD---- 55 I D F G GG +E S +I +P +V + N P+TL + + Sbjct: 5 IVDNFAGGGGASTGIELAIGR-------SVDIAINHDPNAVAMHTTNHPDTLHYCESVYS 57 Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82 I + C+ FS+A Sbjct: 58 IRPKVATAGRRVGLAWFSPDCRHFSKA 84 >gi|83319814|ref|YP_424525.1| C-5 cytosine-specific DNA methylase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283700|gb|ABC01632.1| C-5 cytosine-specific DNA methylase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 277 Score = 35.9 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 15/21 (71%) Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 +++P D++LA PC+ +S A Sbjct: 86 KELPKPDIILASPPCESWSGA 106 >gi|197336407|ref|YP_002157239.1| RNA methyltransferase, RsmD family [Vibrio fischeri MJ11] gi|197317897|gb|ACH67344.1| RNA methyltransferase, RsmD family [Vibrio fischeri MJ11] Length = 200 Score = 35.9 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF G GG L E R E E+N + + N Sbjct: 64 RCLDLFSGSGG--LGFEAA--SRGAEHVVMLELNKQAHAQLKQN 103 >gi|59713061|ref|YP_205837.1| methyltransferase [Vibrio fischeri ES114] gi|59481162|gb|AAW86949.1| predicted methyltransferase [Vibrio fischeri ES114] Length = 200 Score = 35.9 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF G GG L E R E E+N + + N Sbjct: 64 RCLDLFSGSGG--LGFEAA--SRGAEHVVMLELNKQAHAQLKQN 103 >gi|227892679|ref|ZP_04010484.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus ultunensis DSM 16047] gi|227865550|gb|EEJ72971.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus ultunensis DSM 16047] Length = 280 Score = 35.9 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 7/78 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 K+ DL G G I + L + + ++ ++S++ +++T + NF N + D+ K Sbjct: 111 KVLDLGTGSGCITVALAKEAEKKGIKALTLYASDVTDTALRTSEENFLNYHL--DVTTRK 168 Query: 61 TQ---DIPDHDVLLAGFP 75 + D++++ P Sbjct: 169 ANVLIGLEKFDLIISNPP 186 >gi|224055029|ref|XP_002198425.1| PREDICTED: hypothetical protein LOC100190368 [Taeniopygia guttata] gi|224055031|ref|XP_002198453.1| PREDICTED: similar to putative RIKEN cDNA 2810410A08 [Taeniopygia guttata] gi|197128487|gb|ACH44985.1| putative RIKEN cDNA 2810410A08 [Taeniopygia guttata] gi|197128488|gb|ACH44986.1| putative RIKEN cDNA 2810410A08 [Taeniopygia guttata] gi|197128489|gb|ACH44987.1| putative RIKEN cDNA 2810410A08 [Taeniopygia guttata] gi|197128490|gb|ACH44988.1| putative RIKEN cDNA 2810410A08 [Taeniopygia guttata] Length = 214 Score = 35.9 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 10/79 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------TLIFGDI 56 I DL CG G + + C +I+ +++ + +N + ++ DI Sbjct: 54 TIADLGCGCGMLSIG--SAMLGAGF-CVGL-DIDADALEIFNSNIEDFDLTNVNMVQCDI 109 Query: 57 AKIKTQDIPDHDVLLAGFP 75 + D ++ P Sbjct: 110 CSLSDSMSDTFDTVIMNPP 128 >gi|167756531|ref|ZP_02428658.1| hypothetical protein CLORAM_02068 [Clostridium ramosum DSM 1402] gi|237733129|ref|ZP_04563610.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|167702706|gb|EDS17285.1| hypothetical protein CLORAM_02068 [Clostridium ramosum DSM 1402] gi|229383811|gb|EEO33902.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 183 Score = 35.9 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 4/44 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF 47 + DLF G GG L +E R E +S + + + + NF Sbjct: 45 VLDLFAGSGG--LGIEAL--SRGYEHLYSVDNQYAAFQVIKENF 84 >gi|261418686|ref|YP_003252368.1| RNA methyltransferase, TrmA family [Geobacillus sp. Y412MC61] gi|319765501|ref|YP_004131002.1| RNA methyltransferase, TrmA family [Geobacillus sp. Y412MC52] gi|261375143|gb|ACX77886.1| RNA methyltransferase, TrmA family [Geobacillus sp. Y412MC61] gi|317110367|gb|ADU92859.1| RNA methyltransferase, TrmA family [Geobacillus sp. Y412MC52] Length = 462 Score = 35.9 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Query: 3 KITDLFCGIGGIRLDL-EQTFNHRNVECFFSS 33 K+ DLFCG+G L ++ +E +S Sbjct: 317 KMIDLFCGVGTFSLPFAKRVKELAGIEIVETS 348 >gi|257453414|ref|ZP_05618709.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Enhydrobacter aerosaccus SK60] gi|257449166|gb|EEV24114.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Enhydrobacter aerosaccus SK60] Length = 389 Score = 35.9 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 9/79 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ DL G G I + L F V+ +S+I+ +++ N + + + I++ Sbjct: 211 RMLDLCTGSGCIAIALASRFPDAMVD---ASDIDKNALEVAAVNVDHHHMNHQVNLIESN 267 Query: 63 DIPDH------DVLLAGFP 75 D+++ P Sbjct: 268 LFEKVPAENQYDLIVTNPP 286 >gi|220909632|ref|YP_002484943.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7425] gi|219866243|gb|ACL46582.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7425] Length = 359 Score = 35.9 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 8/52 (15%) Query: 38 YSVKTYQANFPNTLIFGDIAKIKTQDIPDHD--------VLLAGFPCQPFSQ 81 TYQ N T D+ +++ D VL+A PC FSQ Sbjct: 36 NCNATYQRNIGITPKDADLIQLEPSDYRRELGLEREELEVLIACPPCTGFSQ 87 >gi|323498059|ref|ZP_08103065.1| hypothetical protein VISI1226_14367 [Vibrio sinaloensis DSM 21326] gi|323316867|gb|EGA69872.1| hypothetical protein VISI1226_14367 [Vibrio sinaloensis DSM 21326] Length = 199 Score = 35.9 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 5/62 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF G GG L E E E+NP + K Q+N L +I + T Sbjct: 62 KCLDLFAGSGG--LGFESASRQA--EMVTMIELNPQAFKQLQSN-VAALKADNITLVNTD 116 Query: 63 DI 64 + Sbjct: 117 AL 118 >gi|222147749|ref|YP_002548706.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Agrobacterium vitis S4] gi|221734737|gb|ACM35700.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Agrobacterium vitis S4] Length = 418 Score = 35.9 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 6/39 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK 41 ++ DLFCGIG L L + + E + +VK Sbjct: 276 RVADLFCGIGTFTLRLARQAQ------VLAVESDEKAVK 308 >gi|85710835|ref|ZP_01041896.1| N6-adenine-specific methylase [Idiomarina baltica OS145] gi|85695239|gb|EAQ33176.1| N6-adenine-specific methylase [Idiomarina baltica OS145] Length = 199 Score = 35.9 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 4/43 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF G G L E R + E++ + + N Sbjct: 56 VVDLFAGSG--SLGFEAA--SRGAQQVTLIEMDKAAARQLNQN 94 >gi|205373063|ref|ZP_03225868.1| hypothetical protein Bcoam_06735 [Bacillus coahuilensis m4-4] Length = 191 Score = 35.9 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 4/42 (9%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 DLF G GG L +E R +E + + +++T N Sbjct: 46 LDLFAGSGG--LGIEAL--SRGIEHVIFVDRDQKAIQTINQN 83 >gi|307106231|gb|EFN54477.1| hypothetical protein CHLNCDRAFT_135136 [Chlorella variabilis] Length = 824 Score = 35.9 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 29/100 (29%), Gaps = 36/100 (36%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------- 48 L++ +LF G+G + + E++ + +Y AN P Sbjct: 280 LRMVELFAGLGTVS----DAAACAGFQPVCGLEVDAAASSSYCANVPVAGGEEMSVEQFL 335 Query: 49 --------NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80 G IA L A PCQ S Sbjct: 336 HALARGEEGMPEPGSIA-----------YLHASPPCQALS 364 >gi|134288346|ref|YP_001110509.1| C-5 cytosine-specific DNA methylase [Burkholderia vietnamiensis G4] gi|134132996|gb|ABO59706.1| C-5 cytosine-specific DNA methylase [Burkholderia vietnamiensis G4] Length = 524 Score = 35.9 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 9/89 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFP-----NTLIFG 54 +K L+ GIG + + + F +E F+++ ++ + P G Sbjct: 163 IKTVGLYAGIGTLEAAIHEGFADAGLESTTIFANDSWDEAIDCLLTDNPASTRRTKSFAG 222 Query: 55 DIAKIKTQD--IPDHDVLLAGFPCQPFSQ 81 I + IP +L G PC+ S+ Sbjct: 223 GIEQFIASGIRIPGTTLLTIGLPCKGASR 251 >gi|332968213|gb|EGK07290.1| ribosomal RNA small subunit methyltransferase D [Kingella kingae ATCC 23330] Length = 189 Score = 35.5 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 4/42 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA 45 + DLF G G L E H + EI+ +V+ + Sbjct: 56 VLDLFAGSG--ALGFESASRHA--KQVEMCEIHKAAVQNLRH 93 >gi|118580724|ref|YP_901974.1| RNA methyltransferase [Pelobacter propionicus DSM 2379] gi|118503434|gb|ABK99916.1| 23S rRNA m(5)U-1939 methyltransferase [Pelobacter propionicus DSM 2379] Length = 493 Score = 35.5 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 10/80 (12%) Query: 3 KITDLFCGIGGIRLDL-EQTFNHRNVECF-FSSEINPYSVKTYQANFPNTLIF--GDIA- 57 + DL+CGIGGI L L + VE + E + + + N + +F GD+A Sbjct: 341 TVLDLYCGIGGIALTLARRARRVIGVEVVEAAVE---DARRNARMNGISNCVFQAGDVAE 397 Query: 58 --KIKTQDIPDHDVLLAGFP 75 + +D DV++ P Sbjct: 398 QLEELAEDGEGVDVVVLNPP 417 >gi|303274456|ref|XP_003056548.1| hypothetical protein MICPUCDRAFT_55679 [Micromonas pusilla CCMP1545] gi|226462632|gb|EEH59924.1| hypothetical protein MICPUCDRAFT_55679 [Micromonas pusilla CCMP1545] Length = 322 Score = 35.5 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 4/34 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP 37 + DLFCG GG + + R + +IN Sbjct: 140 VLDLFCGAGGNTIAFARCAGAR----VLACDINE 169 >gi|317032892|ref|XP_001394550.2| RNA methylase family protein [Aspergillus niger CBS 513.88] Length = 240 Score = 35.5 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 13/82 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFGD- 55 + D F G GG + + + ++ E NP ++ + N T GD Sbjct: 79 LVDAFAGAGGNSIAFALSGRWKR---VYAIEKNPAVLQCAKHNAKIYGVADKITWFEGDC 135 Query: 56 --IAKIKTQDIPDHDVLLAGFP 75 I K + +D+ + V+ A P Sbjct: 136 FEIIKNQLKDLAPYSVVFASPP 157 >gi|332300619|ref|YP_004442540.1| Protein of unknown function methylase [Porphyromonas asaccharolytica DSM 20707] gi|332177682|gb|AEE13372.1| Protein of unknown function methylase putative [Porphyromonas asaccharolytica DSM 20707] Length = 186 Score = 35.5 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 9/16 (56%), Positives = 12/16 (75%) Query: 3 KITDLFCGIGGIRLDL 18 ++ DLF GIGGI L+ Sbjct: 46 RVLDLFAGIGGISLEF 61 >gi|227824447|ref|ZP_03989279.1| dimethyladenosine transferase [Acidaminococcus sp. D21] gi|226904946|gb|EEH90864.1| dimethyladenosine transferase [Acidaminococcus sp. D21] Length = 287 Score = 35.5 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 18/77 (23%) Query: 10 GIGGIRLDLEQTFNHRNVECFFSSEIN----PYSVKTYQANFPNTLIFGDIAKIKTQDIP 65 GIG + L +T + S EI+ P KT + +I GDI K+ +DI Sbjct: 65 GIGTLTQALAETGAN-----VKSVEIDESLLPILRKTLEGYDNVEIIHGDILKVDLKDI- 118 Query: 66 DHDVLLAGFPCQPFSQA 82 G +PF+ A Sbjct: 119 -----TGG---KPFTVA 127 >gi|149907916|ref|ZP_01896584.1| putative adenine-specific methylase [Moritella sp. PE36] gi|149808922|gb|EDM68853.1| putative adenine-specific methylase [Moritella sp. PE36] Length = 309 Score = 35.5 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++I D+ G G I + L F ++ + +I +++ + N + + I++ Sbjct: 134 MRILDMCTGSGCIAIALSHAFPDSEID---AVDIEHGAIEVAEINIQEHGVENQVTPIQS 190 Query: 62 QDIPD-----HDVLLAGFP 75 + +D++++ P Sbjct: 191 DLFSNLEGLRYDMIVSNPP 209 >gi|124486470|ref|YP_001031086.1| methyltransferase [Methanocorpusculum labreanum Z] gi|124364011|gb|ABN07819.1| methyltransferase [Methanocorpusculum labreanum Z] Length = 308 Score = 35.5 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 11/65 (16%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIFGDI 56 +I D+F G+G + L + +++INP +V Q N I GD Sbjct: 164 RILDMFAGVGPFPVML-----GGKAKLVVANDINPSAVYLLQKNIRLNHLHNVVPILGDA 218 Query: 57 AKIKT 61 + Sbjct: 219 MNLPE 223 >gi|299821541|ref|ZP_07053429.1| site-specific DNA-methyltransferase (adenine-specific) [Listeria grayi DSM 20601] gi|299817206|gb|EFI84442.1| site-specific DNA-methyltransferase (adenine-specific) [Listeria grayi DSM 20601] Length = 189 Score = 35.5 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 8/46 (17%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP--YSVKTYQAN 46 K+ DLF G GG L +E E F I+ +VKT Q N Sbjct: 44 KVLDLFAGSGG--LGIEALSRGAG-EAVF---IDQAISAVKTIQTN 83 >gi|315231713|ref|YP_004072149.1| tRNA (Uracil54-C5-)-methyltransferase [Thermococcus barophilus MP] gi|315184741|gb|ADT84926.1| tRNA (Uracil54-C5-)-methyltransferase [Thermococcus barophilus MP] Length = 417 Score = 35.5 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 5/44 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 K+ DL+ G+G + L + + E EINP++V+ + N Sbjct: 279 KVLDLYSGVGTFGIYLAK----KGFEVEG-IEINPFAVEMARKN 317 >gi|322382544|ref|ZP_08056424.1| hypothetical protein PL1_2270 [Paenibacillus larvae subsp. larvae B-3650] gi|321153460|gb|EFX45865.1| hypothetical protein PL1_2270 [Paenibacillus larvae subsp. larvae B-3650] Length = 185 Score = 35.5 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 4/43 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF G GG L +E R +E +I S+ T + N Sbjct: 45 VLDLFAGTGG--LGIEAL--SRGMEKGIFVDIEKKSLDTIRHN 83 >gi|313680143|ref|YP_004057882.1| hypothetical protein Ocepr_1252 [Oceanithermus profundus DSM 14977] gi|313152858|gb|ADR36709.1| Conserved hypothetical protein CHP00095 [Oceanithermus profundus DSM 14977] Length = 174 Score = 35.5 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 5/43 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 DL+ G G + LE E E +P +VKT + N Sbjct: 47 FLDLYAGSG--AVGLEAA--SEGFEAVL-VESDPGAVKTLREN 84 >gi|253577772|ref|ZP_04855044.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850090|gb|EES78048.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 189 Score = 35.5 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF G GGI +E + E NP + + N Sbjct: 50 RFLDLFSGSGGI--GIEALSRGASYAV--FVEKNPKAAACIREN 89 >gi|138894633|ref|YP_001125086.1| methyltransferase [Geobacillus thermodenitrificans NG80-2] gi|196247758|ref|ZP_03146460.1| methyltransferase [Geobacillus sp. G11MC16] gi|134266146|gb|ABO66341.1| Methyltransferase [Geobacillus thermodenitrificans NG80-2] gi|196212542|gb|EDY07299.1| methyltransferase [Geobacillus sp. G11MC16] Length = 202 Score = 35.5 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 4/42 (9%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 DLF G GG L +E R +E + + +V+T + N Sbjct: 46 LDLFAGSGG--LGIEAL--SRGLERVIFVDHDTKAVQTVRKN 83 >gi|325267341|ref|ZP_08134003.1| ribosomal RNA small subunit methyltransferase D [Kingella denitrificans ATCC 33394] gi|324981278|gb|EGC16928.1| ribosomal RNA small subunit methyltransferase D [Kingella denitrificans ATCC 33394] Length = 190 Score = 35.5 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 4/45 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 L + DLF G G L E H + E+N + Q + Sbjct: 56 LTMLDLFAGSG--ALGFESASRHA--KTVVMCELNRQAAAMLQQH 96 >gi|289207359|ref|YP_003459425.1| methyltransferase [Thioalkalivibrio sp. K90mix] gi|288942990|gb|ADC70689.1| methyltransferase [Thioalkalivibrio sp. K90mix] Length = 203 Score = 35.5 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 14/82 (17%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------TLIFGDI 56 ++ DL+ G G L E R + E + + +AN + D+ Sbjct: 59 RVLDLYAGTG--ALGFEAA--SRGAREVWLVERDARAAAQLEANRERLGATQVHIRRDDV 114 Query: 57 AKIKTQDIPD---HDVLLAGFP 75 A++ Q +P+ DV+ P Sbjct: 115 ARLLGQ-LPEGDPFDVVFLDPP 135 >gi|254282238|ref|ZP_04957206.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [gamma proteobacterium NOR51-B] gi|219678441|gb|EED34790.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [gamma proteobacterium NOR51-B] Length = 301 Score = 35.5 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 8/78 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 +I D+ CG G L + E +I+ ++ + N + G I+ ++ Sbjct: 124 RIVDVCCG--GGSLGILAATEFPGAE-VLCLDIDEKALALAEENIARHGLQGQISTVRAD 180 Query: 63 DI----PD-HDVLLAGFP 75 + PD D++LA P Sbjct: 181 LLGPLSPDSVDIILANPP 198 >gi|241889800|ref|ZP_04777098.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gemella haemolysans ATCC 10379] gi|241863422|gb|EER67806.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gemella haemolysans ATCC 10379] Length = 280 Score = 35.5 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 9/79 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---FPNTLIF--GDI 56 KI DL G G I + L++ +V+ +S+I+ +++ + N T+ F DI Sbjct: 115 FKILDLCTGSGIIAITLKKELEQVSVDVI-ASDISKEAIEVAKENSQSHDATIKFIKSDI 173 Query: 57 AKIKTQDIPDHDVLLAGFP 75 D D++++ P Sbjct: 174 FN-NIDD--KFDIIVSNPP 189 >gi|258574653|ref|XP_002541508.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237901774|gb|EEP76175.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 175 Score = 35.5 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 13/82 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62 + D F G+GG + ++ + ++ E +P ++ + N + I + Sbjct: 77 MIDAFAGVGGNAIAFARSNKWKR---VYAIEKDPAVLQCAKHNAKIYGVEDKITWFEGDC 133 Query: 63 ---------DIPDHDVLLAGFP 75 D+ + V+ A P Sbjct: 134 FETIRLYLKDLGPYSVIFASPP 155 >gi|149203399|ref|ZP_01880369.1| hypothetical protein RTM1035_02240 [Roseovarius sp. TM1035] gi|149143232|gb|EDM31271.1| hypothetical protein RTM1035_02240 [Roseovarius sp. TM1035] Length = 341 Score = 35.5 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 4/34 (11%) Query: 47 FPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80 +P +I D+A ++ D+L+AG PCQ S Sbjct: 37 YPPEIIQHDLAT----EVGKTDLLIAGPPCQGHS 66 >gi|221053907|ref|XP_002261701.1| PHF5-like protein [Plasmodium knowlesi strain H] gi|193808161|emb|CAQ38864.1| PHF5-like protein, putative [Plasmodium knowlesi strain H] Length = 1631 Score = 35.5 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 19/34 (55%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN 36 + DLFCG+G L L + ++ +++ +IN Sbjct: 1378 NVVDLFCGVGYFTLPLLKFVGEGKIKEYYACDIN 1411 >gi|14573301|gb|AAK68037.1| DNA methyltransferase 2e [Homo sapiens] Length = 53 Score = 35.5 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 19/36 (52%), Gaps = 3/36 (8%) Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFG---DIAKIK 60 + + ++N + + Y+ NFP+T + +I KI Sbjct: 10 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEITKIT 45 >gi|261856758|ref|YP_003264041.1| Fmu (Sun) domain protein [Halothiobacillus neapolitanus c2] gi|261837227|gb|ACX96994.1| Fmu (Sun) domain protein [Halothiobacillus neapolitanus c2] Length = 430 Score = 35.5 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 12/31 (38%), Gaps = 2/31 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSE 34 + DL G GG L L + + + + Sbjct: 242 VLDLCAGAGGKSLGLAEAVGEQGH--VLACD 270 >gi|76801331|ref|YP_326339.1| hypothetical protein NP1360A [Natronomonas pharaonis DSM 2160] gi|76557196|emb|CAI48771.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160] Length = 345 Score = 35.5 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 ++ D+F GIG L + ++ ++EI+P + + N Sbjct: 201 RVFDMFAGIGYFTLPMARSGA-----TVTAAEIDPDAYRLLVEN 239 >gi|302525045|ref|ZP_07277387.1| RsmD family RNA methyltransferase [Streptomyces sp. AA4] gi|302433940|gb|EFL05756.1| RsmD family RNA methyltransferase [Streptomyces sp. AA4] Length = 188 Score = 35.5 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 29/79 (36%), Gaps = 10/79 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLIFGDIA 57 ++ DL+ G G L LE R + E + + + N T+ G + Sbjct: 46 RVLDLYAGSG--ALGLEAL--SRGAADAWFVEADRRAADVLRGNVADLRLGGTVRAGQVE 101 Query: 58 KIKTQDIP-DHDVLLAGFP 75 + P DV+LA P Sbjct: 102 TVVAAPAPVQFDVVLADPP 120 >gi|298505465|gb|ADI84188.1| DNA cytosine methyltransferase family protein [Geobacter sulfurreducens KN400] Length = 444 Score = 35.5 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 2/30 (6%) Query: 56 IAKIKTQDIPDHD--VLLAGFPCQPFSQAG 83 I + + + D VL+ G PCQ +S G Sbjct: 32 IDALIEESLAGTDRWVLIGGPPCQAYSIIG 61 >gi|297583617|ref|YP_003699397.1| TrmA family RNA methyltransferase [Bacillus selenitireducens MLS10] gi|297142074|gb|ADH98831.1| RNA methyltransferase, TrmA family [Bacillus selenitireducens MLS10] Length = 464 Score = 35.5 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%) Query: 3 KITDLFCGIGGIRLDL-EQTFNHRNVECFFSS 33 K+ DLFCG+G L + +E SS Sbjct: 320 KMIDLFCGVGTFSLPFASRVKALAGIEIVESS 351 >gi|289422999|ref|ZP_06424819.1| hypothetical protein HMPREF0631_0417 [Peptostreptococcus anaerobius 653-L] gi|289156573|gb|EFD05218.1| hypothetical protein HMPREF0631_0417 [Peptostreptococcus anaerobius 653-L] Length = 39 Score = 35.5 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 7/27 (25%), Positives = 10/27 (37%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE 28 + DLF G GG+ N + Sbjct: 9 FTVIDLFSGAGGLSKGFLDAGNINIFK 35 >gi|117676134|ref|YP_863710.1| C-5 cytosine-specific DNA methylase [Shewanella sp. ANA-3] gi|117614958|gb|ABK50411.1| C-5 cytosine-specific DNA methylase [Shewanella sp. ANA-3] Length = 457 Score = 35.1 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 9/91 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDI-AK 58 LK+ LF G G + + + + + E+ + + N P I + Sbjct: 124 LKVASLFHGGGVLDKAVHHGLESAGISSKIAVAVELESQYLDSSLTNNPELWDSSSIVIE 183 Query: 59 IKTQDIP------DHDVLLAGFPCQPFSQAG 83 QD+ + DVL+AG PC S++G Sbjct: 184 SPVQDVNLQQCNMEVDVLVAGIPCVGASKSG 214 >gi|293364119|ref|ZP_06610853.1| conserved domain protein [Mycoplasma alligatoris A21JP2] gi|292552320|gb|EFF41096.1| conserved domain protein [Mycoplasma alligatoris A21JP2] Length = 49 Score = 35.1 bits (81), Expect = 2.9, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 14/21 (66%) Query: 62 QDIPDHDVLLAGFPCQPFSQA 82 ++P D++LA PC+ +S A Sbjct: 2 SELPKPDIILASPPCESWSGA 22 >gi|78356825|ref|YP_388274.1| hypothetical protein Dde_1782 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219230|gb|ABB38579.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 189 Score = 35.1 bits (81), Expect = 2.9, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 ++ DLF G G E R + E NP +VK ++N Sbjct: 47 RVLDLFAGSG--SCGFEAL--SRGAAEGWFVESNPAAVKVIRSN 86 >gi|242399436|ref|YP_002994861.1| Met-10+ like protein [Thermococcus sibiricus MM 739] gi|242265830|gb|ACS90512.1| Met-10+ like protein [Thermococcus sibiricus MM 739] Length = 333 Score = 35.1 bits (81), Expect = 2.9, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 11/65 (16%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGDIA 57 + D+F G+G + L + V+ F+ ++NP +++ + N I GD+ Sbjct: 188 VFDMFAGVGPYSILLAK-----KVKMVFACDVNPIAIRYLEENKKLNKVENLIPILGDVR 242 Query: 58 KIKTQ 62 K+ Q Sbjct: 243 KVAGQ 247 >gi|147853569|emb|CAN82351.1| hypothetical protein VITISV_019436 [Vitis vinifera] Length = 377 Score = 35.1 bits (81), Expect = 2.9, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 21/63 (33%), Gaps = 12/63 (19%) Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQ 77 + Q + +C +SE + L DI + D + G PCQ Sbjct: 1 MAQACGDAD-DCVSTSEATELA---------EKLDEKDIRNLPRP--GQVDFINGGPPCQ 48 Query: 78 PFS 80 FS Sbjct: 49 GFS 51 >gi|295109966|emb|CBL23919.1| RNA methyltransferase, RsmD family [Ruminococcus obeum A2-162] Length = 184 Score = 35.1 bits (81), Expect = 2.9, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF G GGI +E F+ E NP + + N Sbjct: 44 RFLDLFSGSGGI--GIEALSRGAAY-AVFA-EKNPKACSCIRDN 83 >gi|307106990|gb|EFN55234.1| hypothetical protein CHLNCDRAFT_52630 [Chlorella variabilis] Length = 1211 Score = 35.1 bits (81), Expect = 3.0, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 4/36 (11%) Query: 49 NTLIFGDIAKIKTQD-IP---DHDVLLAGFPCQPFS 80 + L+ G + K++ + IP + D + G PCQ S Sbjct: 521 DELLRGFVRKLRERQLIPFPGEVDFICGGPPCQGIS 556 >gi|255994774|ref|ZP_05427909.1| RNA methyltransferase, RsmD family [Eubacterium saphenum ATCC 49989] gi|255993487|gb|EEU03576.1| RNA methyltransferase, RsmD family [Eubacterium saphenum ATCC 49989] Length = 179 Score = 35.1 bits (81), Expect = 3.0, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 11/74 (14%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGD 55 K+ DLF G G + LE + C F SE N K AN + L GD Sbjct: 44 KVADLFAGTGAM--GLE-ALSRGAASCIF-SENNISMQKILAANIKSVGADSSAELHRGD 99 Query: 56 IAKIKTQDIPDHDV 69 + D D+ Sbjct: 100 YRSAIDKTGTDVDI 113 >gi|219124256|ref|XP_002182424.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406385|gb|EEC46325.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 587 Score = 35.1 bits (81), Expect = 3.0, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 I D FCG+G + L L + RN ++++ NP +V+ + N Sbjct: 373 IADPFCGVGALCL-LAASLPQRNC-TIWANDWNPKAVEYLREN 413 >gi|224076024|ref|XP_002304878.1| hypothetical protein POPTRDRAFT_555246 [Populus trichocarpa] gi|222842310|gb|EEE79857.1| hypothetical protein POPTRDRAFT_555246 [Populus trichocarpa] Length = 250 Score = 35.1 bits (81), Expect = 3.0, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 66 DHDVLLAGFPCQPFS 80 D DV+ G PCQ S Sbjct: 72 DVDVICGGPPCQGIS 86 >gi|217973804|ref|YP_002358555.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS223] gi|217498939|gb|ACK47132.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS223] Length = 555 Score = 35.1 bits (81), Expect = 3.0, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Query: 36 NPYSVKTYQANFPNTLIFG----DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82 +P ++ + N PNTL + DI ++ D+ C+ FS+A Sbjct: 34 DPDAIAMHSVNHPNTLHYCESVFDIDPVQATAGKPVDLAWFSPDCKHFSKA 84 >gi|306478566|gb|ADM89620.1| truncated DNA-methyltransferase 3a [Felis catus] Length = 98 Score = 35.1 bits (81), Expect = 3.1, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 3/31 (9%) Query: 54 GDIAKIKTQDIPD---HDVLLAGFPCQPFSQ 81 GD+ + + I + D+++ G PC S Sbjct: 6 GDVRSVTQKHIQEWGPFDLVIGGSPCNDLSI 36 >gi|195997797|ref|XP_002108767.1| hypothetical protein TRIADDRAFT_18638 [Trichoplax adhaerens] gi|190589543|gb|EDV29565.1| hypothetical protein TRIADDRAFT_18638 [Trichoplax adhaerens] Length = 373 Score = 35.1 bits (81), Expect = 3.1, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 3/42 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA 45 I DL+ GIG L H + + E NP++V+ + Sbjct: 205 IVDLYAGIGYFVLPY---LIHAKAKFVHACEWNPHAVEALEK 243 >gi|153835098|ref|ZP_01987765.1| putative methyltransferase [Vibrio harveyi HY01] gi|148868448|gb|EDL67556.1| putative methyltransferase [Vibrio harveyi HY01] Length = 199 Score = 35.1 bits (81), Expect = 3.1, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 5/62 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 K DLF G GG L E + E+NP + + Q N +L +I + T Sbjct: 62 KCLDLFAGSGG--LGFESASRQA--DQVTMIELNPQAFQQLQKN-VASLNANNIQVVNTD 116 Query: 63 DI 64 I Sbjct: 117 AI 118 >gi|134079238|emb|CAK40721.1| unnamed protein product [Aspergillus niger] Length = 266 Score = 35.1 bits (81), Expect = 3.1, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 13/82 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFGD- 55 + D F G GG + + + ++ E NP ++ + N T GD Sbjct: 105 LVDAFAGAGGNSIAFALSGRWKR---VYAIEKNPAVLQCAKHNAKIYGVADKITWFEGDC 161 Query: 56 --IAKIKTQDIPDHDVLLAGFP 75 I K + +D+ + V+ A P Sbjct: 162 FEIIKNQLKDLAPYSVVFASPP 183 >gi|118431330|ref|NP_147718.2| hypothetical protein APE_1106.1 [Aeropyrum pernix K1] gi|116062653|dbj|BAA80091.2| conserved hypothetical protein [Aeropyrum pernix K1] Length = 344 Score = 35.1 bits (81), Expect = 3.1, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 10/39 (25%) Query: 3 KITDLFCGIGGIRL---DLEQTFNHRNVECFFSSEINPY 38 ++ D+F G+GG + L + +S+INP+ Sbjct: 188 RVLDMFSGVGGFSIHTASLRRAS-------VVASDINPH 219 >gi|138893992|ref|YP_001124445.1| SAM-dependent methyltransferase [Geobacillus thermodenitrificans NG80-2] gi|134265505|gb|ABO65700.1| SAM-dependent methyltransferase [Geobacillus thermodenitrificans NG80-2] Length = 463 Score = 35.1 bits (81), Expect = 3.2, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNH-RNVECFFSS 33 K+ DLFCG+G L + +E +S Sbjct: 317 KMIDLFCGVGTFSLPFAKRVKALAGIEIVETS 348 >gi|332290054|ref|YP_004420906.1| 23S rRNA methyluridine methyltransferase [Gallibacterium anatis UMN179] gi|330432950|gb|AEC18009.1| 23S rRNA methyluridine methyltransferase [Gallibacterium anatis UMN179] Length = 387 Score = 35.1 bits (81), Expect = 3.2, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 19/83 (22%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFS---SEINPYSVKT----------YQANFPNTLI 52 DLFCG+GG L + VE S EI+ ++++ Y A F + Sbjct: 244 DLFCGVGGF--GLHCALARKKVEPEVSLVGIEISESAIRSARLAAEKAGLYNAIFQDL-- 299 Query: 53 FGDIAKIKTQDIPDHDVLLAGFP 75 D +K + D+++ P Sbjct: 300 --DASKFQANQGDKPDLVIVNPP 320 >gi|39996552|ref|NP_952503.1| RNA methyltransferase [Geobacter sulfurreducens PCA] gi|51316711|sp|Q74D67|Y1452_GEOSL RecName: Full=Uncharacterized RNA methyltransferase GSU1452 gi|39983433|gb|AAR34826.1| RNA methyltransferase, TrmA family [Geobacter sulfurreducens PCA] gi|307634847|gb|ADI84291.2| RNA methyltransferase, TrmA family [Geobacter sulfurreducens KN400] Length = 495 Score = 35.1 bits (81), Expect = 3.2, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 4/76 (5%) Query: 4 ITDLFCGIGGIRLDLEQ-TFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 + DL+CGIGGI L L +E ++ + S + GD A++ + Sbjct: 324 VVDLYCGIGGIALFLAGTAREVHGIEVVEAAVNDAESNARLNRIHNCSFEAGDAAELIEE 383 Query: 63 DIPD---HDVLLAGFP 75 + + D+++ P Sbjct: 384 LVEEGERLDLVVLNPP 399 >gi|146297084|ref|YP_001180855.1| sun protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410660|gb|ABP67664.1| sun protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 433 Score = 35.1 bits (81), Expect = 3.2, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 10/82 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----FPNTLI-FGDIA 57 I DL GG R S ++N ++ + N F N ++ D Sbjct: 259 ILDLCAAPGG--KTFNCAEVTRGF--VVSCDVNKSKIERLRENLLRLGFDNVVVAENDAL 314 Query: 58 KIKTQDIPDHDVLLAGFPCQPF 79 + + D+++A PC F Sbjct: 315 TLNEDFVGKFDIVIADLPCSGF 336 >gi|311896515|dbj|BAJ28923.1| hypothetical protein KSE_31130 [Kitasatospora setae KM-6054] Length = 393 Score = 35.1 bits (81), Expect = 3.3, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 8/72 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ DL CGIGG + L + + + + + + +AN L + +++ Sbjct: 99 RLADLCCGIGGDAIALARAGIA-----VLAVDRDELTCEVARAN-AAALGVAKLVEVRRA 152 Query: 63 DIPDHDVLLAGF 74 D+ D D AGF Sbjct: 153 DVADVD--TAGF 162 >gi|218460006|ref|ZP_03500097.1| DNA-cytosine methyltransferase [Rhizobium etli Kim 5] Length = 343 Score = 35.1 bits (81), Expect = 3.3, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 10/15 (66%) Query: 69 VLLAGFPCQPFSQAG 83 VL+ G PCQ +S G Sbjct: 97 VLIGGPPCQAYSLVG 111 >gi|227488104|ref|ZP_03918420.1| possible methyltransferase [Corynebacterium glucuronolyticum ATCC 51867] gi|227541501|ref|ZP_03971550.1| possible methyltransferase [Corynebacterium glucuronolyticum ATCC 51866] gi|227091966|gb|EEI27278.1| possible methyltransferase [Corynebacterium glucuronolyticum ATCC 51867] gi|227182783|gb|EEI63755.1| possible methyltransferase [Corynebacterium glucuronolyticum ATCC 51866] Length = 190 Score = 35.1 bits (81), Expect = 3.4, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 4/39 (10%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK 41 ++ DLF G G L LE R E E NP + Sbjct: 46 RVLDLFAGSG--ALGLEAA--SRGAEMVVLVESNPKAAA 80 >gi|282889691|ref|ZP_06298230.1| hypothetical protein pah_c004o034 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500265|gb|EFB42545.1| hypothetical protein pah_c004o034 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 449 Score = 35.1 bits (81), Expect = 3.4, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 6/76 (7%) Query: 3 KITDLFCGIGGIRL-DLEQTFNHRNVECF-FSSEINPYSVKTYQAN-FPNTLIFGDIAKI 59 D FCG+G + L Q +EC + E + + Q N N + + D A+ Sbjct: 308 TFLDAFCGVGTMTLIAAGQAKECIGIECVPQAIE-DANANA--QLNQISNAVFYCDHAES 364 Query: 60 KTQDIPDHDVLLAGFP 75 K Q + D DV+ P Sbjct: 365 KIQSLKDIDVVFLNPP 380 >gi|55378190|ref|YP_136040.1| methyltransferase [Haloarcula marismortui ATCC 43049] gi|55230915|gb|AAV46334.1| predicted methyltransferase [Haloarcula marismortui ATCC 43049] Length = 326 Score = 35.1 bits (81), Expect = 3.5, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 14/74 (18%) Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDIAK 58 D+F G+G + + R C + +IN +++ QAN T I GD+ + Sbjct: 180 DMFAGVGPFAIPFAK----RGASCVGT-DINETAIEYLQANAERNGVADRMTGICGDVRE 234 Query: 59 I--KTQDIPDHDVL 70 + + +D D V+ Sbjct: 235 VAGEYEDWADRVVM 248 >gi|302383493|ref|YP_003819316.1| methyltransferase [Brevundimonas subvibrioides ATCC 15264] gi|302194121|gb|ADL01693.1| methyltransferase [Brevundimonas subvibrioides ATCC 15264] Length = 188 Score = 35.1 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 4/45 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 +++ DLF G G L E C F E + + + N Sbjct: 48 MRVMDLFAGSG--ALGFEAISRGAAF-CLF-VETDELARGVIREN 88 >gi|121699691|ref|XP_001268111.1| RNA methylase family protein, putative [Aspergillus clavatus NRRL 1] gi|119396253|gb|EAW06685.1| RNA methylase family protein, putative [Aspergillus clavatus NRRL 1] Length = 238 Score = 35.1 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 13/82 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFGD- 55 + D F G GG + +T + ++ E NP ++ + N T GD Sbjct: 77 LVDAFAGAGGNTIAFARTGKWKR---VYAIEKNPAVLQCAKHNAKVYGVADKITWFQGDC 133 Query: 56 --IAKIKTQDIPDHDVLLAGFP 75 I K + +++ + ++ A P Sbjct: 134 FEILKNQLKELAPYSIVFASPP 155 >gi|51891179|ref|YP_073870.1| hypothetical protein STH41 [Symbiobacterium thermophilum IAM 14863] gi|51854868|dbj|BAD39026.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM 14863] Length = 421 Score = 34.7 bits (80), Expect = 3.7, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 7/46 (15%) Query: 7 LFCGI---GGIR----LDLEQTFNHRNVECFFSSEINPYSVKTYQA 45 LF GI GG+ + + + + +I+ + TYQ Sbjct: 314 LFAGIRLDGGLDPEQEEGVRRALRAAGFDPDYYYQIDRAASATYQY 359 >gi|168043495|ref|XP_001774220.1| predicted protein [Physcomitrella patens subsp. patens] gi|162674488|gb|EDQ60996.1| predicted protein [Physcomitrella patens subsp. patens] Length = 480 Score = 34.7 bits (80), Expect = 3.7, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 12/56 (21%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59 I D+F GIG + Q +++++NP SVK + N DI K+ Sbjct: 228 IVDMFAGIGPFAIPAAQQGCA-----VYANDLNPTSVKFLKLN-------SDINKV 271 >gi|148264841|ref|YP_001231547.1| RNA methyltransferase [Geobacter uraniireducens Rf4] gi|146398341|gb|ABQ26974.1| 23S rRNA m(5)U-1939 methyltransferase [Geobacter uraniireducens Rf4] Length = 470 Score = 34.7 bits (80), Expect = 3.7, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Query: 3 KITDLFCGIGGIRLDLE-QTFNHRNVECFFS 32 ++ DL+CGIGGI L L + +E + Sbjct: 324 RVLDLYCGIGGISLFLAGKAREVLGIEVVEA 354 >gi|332158500|ref|YP_004423779.1| methyltransferase related protein [Pyrococcus sp. NA2] gi|331033963|gb|AEC51775.1| methyltransferase related protein [Pyrococcus sp. NA2] Length = 204 Score = 34.7 bits (80), Expect = 3.8, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 28/79 (35%), Gaps = 14/79 (17%) Query: 3 KIT-DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56 K+ DL G G + + ++ EI+ +V+ + N + GD+ Sbjct: 51 KVIADLGAGTGVLSYGA----LLLGAKKVYAVEIDSEAVEILKENLKEFKGKFEVFLGDV 106 Query: 57 AKIKTQDIPDHDVLLAGFP 75 + K D ++ P Sbjct: 107 SSFKV----KVDTVIMNPP 121 >gi|303245504|ref|ZP_07331788.1| methyltransferase [Desulfovibrio fructosovorans JJ] gi|302493353|gb|EFL53215.1| methyltransferase [Desulfovibrio fructosovorans JJ] Length = 202 Score = 34.7 bits (80), Expect = 3.8, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 ++ DLF G G + +E + C F E NP K + N Sbjct: 49 RVLDLFAGAG--SVGIEALSRGADF-CLF-VEKNPAVAKMLREN 88 >gi|108562476|ref|YP_626792.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori HPAG1] gi|217032847|ref|ZP_03438326.1| hypothetical protein HPB128_165g6 [Helicobacter pylori B128] gi|298737005|ref|YP_003729535.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori B8] gi|107836249|gb|ABF84118.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori HPAG1] gi|216945430|gb|EEC24094.1| hypothetical protein HPB128_165g6 [Helicobacter pylori B128] gi|298356199|emb|CBI67071.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori B8] Length = 47 Score = 34.7 bits (80), Expect = 3.8, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 12/34 (35%), Gaps = 4/34 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI 35 L LF G G L EC ++EI Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEI 36 >gi|34540441|ref|NP_904920.1| ribosomal protein L11 methyltransferase [Porphyromonas gingivalis W83] gi|34396754|gb|AAQ65819.1| ribosomal protein L11 methyltransferase [Porphyromonas gingivalis W83] Length = 311 Score = 34.7 bits (80), Expect = 3.8, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 18/80 (22%) Query: 2 LKITDLFCGIG-GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 L++ D+ G G GI L + +I+ + ++ N DI I Sbjct: 172 LRVLDM--GCGTGI---LAILARKLGASSVTAIDIDDWCIR----NTGENAALNDIRDID 222 Query: 61 TQ--------DIPDHDVLLA 72 + D P D+++A Sbjct: 223 VRIGDASLLADCPMFDLIIA 242 >gi|209696303|ref|YP_002264234.1| hypothetical protein VSAL_I2904 [Aliivibrio salmonicida LFI1238] gi|208010257|emb|CAQ80588.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238] Length = 202 Score = 34.7 bits (80), Expect = 3.9, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF G GG L E R E E+N + + N Sbjct: 64 RCLDLFSGSGG--LGFEAA--SRGAEHVVMLELNKQAHTQLKQN 103 >gi|38605127|sp|P60093|PRMA_PORGI RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase Length = 290 Score = 34.7 bits (80), Expect = 3.9, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 18/80 (22%) Query: 2 LKITDLFCGIG-GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 L++ D+ G G GI L + +I+ + ++ N DI I Sbjct: 151 LRVLDM--GCGTGI---LAILARKLGASSVTAIDIDDWCIR----NTGENAALNDIRDID 201 Query: 61 TQ--------DIPDHDVLLA 72 + D P D+++A Sbjct: 202 VRIGDASLLADCPMFDLIIA 221 >gi|260892044|ref|YP_003238141.1| methyltransferase [Ammonifex degensii KC4] gi|260864185|gb|ACX51291.1| methyltransferase [Ammonifex degensii KC4] Length = 189 Score = 34.7 bits (80), Expect = 4.0, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF G GG + +E R + E +P +VK + N Sbjct: 44 RFLDLFAGTGG--VGIEAL--SRGAKFAVFVERDPRAVKLIREN 83 >gi|171911252|ref|ZP_02926722.1| C-5 cytosine-specific DNA methylase [Verrucomicrobium spinosum DSM 4136] Length = 497 Score = 34.7 bits (80), Expect = 4.1, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 7/87 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIF-GDIAK 58 ++I DLFCG GG + + +V+T +AN P++ + + Sbjct: 6 IRIADLFCGGGGTTTGAKLACYDLGYNVDLVGVNHWER-AVETSRANHPDSRHYCASLDN 64 Query: 59 IKTQDI---PDHDVLLAGFPCQPFSQA 82 I + I + DVL A C S A Sbjct: 65 INPRHIYGEGELDVLWASPECTNHSPA 91 >gi|19552546|ref|NP_600548.1| N6-adenine-specific methylase [Corynebacterium glutamicum ATCC 13032] gi|62390210|ref|YP_225612.1| N6-adenine-specific methylase [Corynebacterium glutamicum ATCC 13032] gi|145295469|ref|YP_001138290.1| N6-adenine-specific methylase [Corynebacterium glutamicum R] gi|21324096|dbj|BAB98721.1| N6-adenine-specific methylase [Corynebacterium glutamicum ATCC 13032] gi|41325546|emb|CAF20026.1| N6-adenine-specific methylase [Corynebacterium glutamicum ATCC 13032] gi|140845389|dbj|BAF54388.1| hypothetical protein [Corynebacterium glutamicum R] Length = 194 Score = 34.7 bits (80), Expect = 4.1, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 ++ D+F G G L LE R + E NP +V+ + N Sbjct: 48 RVLDIFAGSG--ALGLEAA--SRGADEVVLVESNPKAVEVIRRN 87 >gi|317472740|ref|ZP_07932053.1| RsmD family RNA methyltransferase [Anaerostipes sp. 3_2_56FAA] gi|316899766|gb|EFV21767.1| RsmD family RNA methyltransferase [Anaerostipes sp. 3_2_56FAA] Length = 187 Score = 34.7 bits (80), Expect = 4.2, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 6/53 (11%) Query: 4 ITDLFCGIGGIRL-DLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55 DLF G G I + L + H E N + + N +T + D Sbjct: 45 FLDLFAGSGAIGIEALSRGCKHAVF-----VEKNKKAAACIRYNLIHTKLIND 92 >gi|225451414|ref|XP_002273563.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296082357|emb|CBI21362.3| unnamed protein product [Vitis vinifera] Length = 497 Score = 34.7 bits (80), Expect = 4.2, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA 45 + DL+ G G I L L T R+V+C EIN + +++ Sbjct: 287 VADLYAGAGVIGLSLAATRKCRSVKCI---EINKEARLSFEK 325 >gi|194246673|ref|YP_002004312.1| probable dimethyladenosine transferase [Candidatus Phytoplasma mali] gi|193807030|emb|CAP18466.1| probable dimethyladenosine transferase [Candidatus Phytoplasma mali] Length = 474 Score = 34.7 bits (80), Expect = 4.3, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59 KI +L GIG I + + V+ S EIN S + FP T+I GD+ + Sbjct: 291 KILELGAGIGNIT---QYLVDKYGVQNIISIEINSDSCDFLRKRFPELTVIQGDVKDV 345 >gi|119714686|ref|YP_921651.1| HemK family modification methylase [Nocardioides sp. JS614] gi|119535347|gb|ABL79964.1| modification methylase, HemK family [Nocardioides sp. JS614] Length = 299 Score = 34.7 bits (80), Expect = 4.3, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGD 55 DL CG G I + L V +++I+P +V+ + N P+ + GD Sbjct: 108 VDLCCGTGAIGVALLAAVPGAEVH---AADIDPAAVRCARRNLPPDRVHEGD 156 >gi|209544778|ref|YP_002277007.1| DNA-cytosine methyltransferase [Gluconacetobacter diazotrophicus PAl 5] gi|209532455|gb|ACI52392.1| DNA-cytosine methyltransferase [Gluconacetobacter diazotrophicus PAl 5] Length = 435 Score = 34.7 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 25/76 (32%), Gaps = 23/76 (30%) Query: 27 VECFFSSEINPYSVKTYQAN----------FPN-----TLIFGDIAKIKTQDIPD----H 67 ++ + TY+AN +P D+ ++ + Sbjct: 28 FAIEAHAD----AFDTYRANLLDSGRNRHSWPAWLDKRAWQAQDVLVHHETELAELRGKV 83 Query: 68 DVLLAGFPCQPFSQAG 83 D++ G PCQ FS G Sbjct: 84 DLVAGGPPCQGFSMNG 99 >gi|162149538|ref|YP_001603999.1| cytosine-specifi methyltransferase DdeI [Gluconacetobacter diazotrophicus PAl 5] gi|161788115|emb|CAP57719.1| putative cytosine-specifi methyltransferase DdeI [Gluconacetobacter diazotrophicus PAl 5] Length = 435 Score = 34.7 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 25/76 (32%), Gaps = 23/76 (30%) Query: 27 VECFFSSEINPYSVKTYQAN----------FPN-----TLIFGDIAKIKTQDIPD----H 67 ++ + TY+AN +P D+ ++ + Sbjct: 28 FAIEAHAD----AFDTYRANLLDSGRNRHSWPAWLDKRAWQAQDVLVHHETELAELRGKV 83 Query: 68 DVLLAGFPCQPFSQAG 83 D++ G PCQ FS G Sbjct: 84 DLVAGGPPCQGFSMNG 99 >gi|291444170|ref|ZP_06583560.1| methytransferase [Streptomyces roseosporus NRRL 15998] gi|291347117|gb|EFE74021.1| methytransferase [Streptomyces roseosporus NRRL 15998] Length = 266 Score = 34.7 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAK-IK 60 + DL CG G + + L + ++ + ++ P +V+ + N + + GD+ + Sbjct: 101 VVDLCCGSGALGVALATALDRVDLH---ACDVEPAAVRCARRNVGDLGEVYEGDLFDPLP 157 Query: 61 TQDIPDHDVLLAGFP 75 + DVLLA P Sbjct: 158 ARLRGRVDVLLANVP 172 >gi|239940731|ref|ZP_04692668.1| putative methylase [Streptomyces roseosporus NRRL 15998] gi|239987209|ref|ZP_04707873.1| putative methylase [Streptomyces roseosporus NRRL 11379] Length = 263 Score = 34.7 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAK-IK 60 + DL CG G + + L + ++ + ++ P +V+ + N + + GD+ + Sbjct: 98 VVDLCCGSGALGVALATALDRVDLH---ACDVEPAAVRCARRNVGDLGEVYEGDLFDPLP 154 Query: 61 TQDIPDHDVLLAGFP 75 + DVLLA P Sbjct: 155 ARLRGRVDVLLANVP 169 >gi|83645219|ref|YP_433654.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Hahella chejuensis KCTC 2396] gi|83633262|gb|ABC29229.1| Methylase of polypeptide chain release factors [Hahella chejuensis KCTC 2396] Length = 301 Score = 34.7 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 9/79 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L+I DL CG G I + E + +I+P ++ + N GD K+ Sbjct: 131 LRILDLCCGSGCI--GIAAAHVFPEAEVVLA-DISPLALDVARRN-VARHHLGDRCKVVE 186 Query: 62 QDIPD-----HDVLLAGFP 75 D+ D DV+L P Sbjct: 187 SDMFDALQGEFDVILTNPP 205 >gi|325116460|emb|CBZ52014.1| hypothetical protein NCLIV_018040 [Neospora caninum Liverpool] Length = 828 Score = 34.7 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 4/43 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + D F G+G L L Q N +++ NP +V + N Sbjct: 537 VLDCFAGVGAFSLFLAQRRNCL----VLANDFNPNAVICMKKN 575 >gi|296113394|ref|YP_003627332.1| ribosomal large subunit L3 glutamine methyltransfere [Moraxella catarrhalis RH4] gi|295921088|gb|ADG61439.1| ribosomal large subunit L3 glutamine methyltransfere [Moraxella catarrhalis RH4] Length = 370 Score = 34.7 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 +I DL G G I + L + F N++ +++I+ +++ N + + + +++ Sbjct: 187 RILDLCTGSGCIAIALAKAFPDANID---ATDIDKDALEVAWTNVEHHELAHQVNLLESN 243 >gi|91094613|ref|XP_968719.1| PREDICTED: similar to CG32281 CG32281-PA [Tribolium castaneum] gi|270016438|gb|EFA12884.1| hypothetical protein TcasGA2_TC011563 [Tribolium castaneum] Length = 507 Score = 34.7 bits (80), Expect = 4.5, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFP 48 + D+F G+G + L + +C F++++NP S K NF Sbjct: 232 VFDVFAGVGPFSVPLARK------KCQVFANDLNPESFKWLNHNFK 271 >gi|187929431|ref|YP_001899918.1| C-5 cytosine-specific DNA methylase [Ralstonia pickettii 12J] gi|187726321|gb|ACD27486.1| C-5 cytosine-specific DNA methylase [Ralstonia pickettii 12J] Length = 559 Score = 34.7 bits (80), Expect = 4.5, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 27/104 (25%), Gaps = 33/104 (31%) Query: 8 FCGIGGIRLDLEQTFNHRN-----VECFFSSEINPYS-------------------VKTY 43 G+GG ++ + +C + +P + + Y Sbjct: 13 CSGLGGGAKGFKKAMSQVGAKTATWKCIGGIDNDPAAARDFHKLVGVPCTVMDLFTRQQY 72 Query: 44 QANFPNTLIFG-------DIAKIKTQDIPDHDVLLAGFPCQPFS 80 A G DI + + P + PC+ S Sbjct: 73 IAFHGKEPPHGWREATAEDIRRAAGYEHPHSVFI--SSPCKGAS 114 >gi|326559238|gb|EGE09669.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis 46P47B1] gi|326559877|gb|EGE10277.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis 7169] gi|326560774|gb|EGE11141.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis 103P14B1] gi|326563515|gb|EGE13774.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis 12P80B1] gi|326569637|gb|EGE19689.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis BC1] gi|326570118|gb|EGE20163.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis BC8] gi|326570856|gb|EGE20880.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis BC7] gi|326574405|gb|EGE24347.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis 101P30B1] gi|326576001|gb|EGE25924.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis CO72] gi|326576413|gb|EGE26322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis O35E] Length = 370 Score = 34.7 bits (80), Expect = 4.5, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 +I DL G G I + L + F N++ +++I+ +++ N + + + +++ Sbjct: 187 RILDLCTGSGCIAIALAKAFPDANID---ATDIDKDALEVAWTNVEHHELAHQVNLLESN 243 >gi|148377597|ref|YP_001256473.1| CpG DNA methylase [Mycoplasma agalactiae PG2] gi|148291643|emb|CAL59029.1| CpG DNA methylase [Mycoplasma agalactiae PG2] Length = 372 Score = 34.7 bits (80), Expect = 4.6, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 2/30 (6%) Query: 55 DIAKIKTQDIPD--HDVLLAGFPCQPFSQA 82 DI + I D++ FPCQ S A Sbjct: 75 DINCLDPAIIKKLKIDLITYSFPCQGLSIA 104 >gi|296283759|ref|ZP_06861757.1| tRNA and rRNA cytosine-C5-methylase [Citromicrobium bathyomarinum JL354] Length = 396 Score = 34.7 bits (80), Expect = 4.7, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP 37 + DL G GG L L +R +S+ + Sbjct: 204 TVIDLCAGAGGKTLALAAAMENRGRLI--ASDTDK 236 >gi|329765827|ref|ZP_08257393.1| protein of unknown function Met10 [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137670|gb|EGG41940.1| protein of unknown function Met10 [Candidatus Nitrosoarchaeum limnia SFB1] Length = 275 Score = 34.3 bits (79), Expect = 4.8, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 + ++F G+G + + +C +S +INP +VK + N + I G++ I Sbjct: 123 TVVNMFAGVGMFSI-----MIAKKKKCTVYSIDINPIAVKLCERNILSNKILGNVISING 177 Query: 62 Q 62 Sbjct: 178 D 178 >gi|329947297|ref|ZP_08294564.1| putative 23S rRNA (uracil-5-)-methyltransferase RumB [Actinomyces sp. oral taxon 170 str. F0386] gi|328525514|gb|EGF52558.1| putative 23S rRNA (uracil-5-)-methyltransferase RumB [Actinomyces sp. oral taxon 170 str. F0386] Length = 412 Score = 34.3 bits (79), Expect = 4.8, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 16/34 (47%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN 36 ++ DLFCG+GG L L +S I+ Sbjct: 261 RVWDLFCGVGGFALALAAPGRRVLGVEVSASAID 294 >gi|325066757|ref|ZP_08125430.1| 23S rRNA methyluridine methyltransferase [Actinomyces oris K20] Length = 317 Score = 34.3 bits (79), Expect = 4.8, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 16/34 (47%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN 36 ++ DLFCG+GG L L +S I+ Sbjct: 175 RVWDLFCGVGGFALALAAPGRRVLGVEVSASAID 208 >gi|66805897|ref|XP_636670.1| hypothetical protein DDB_G0288547 [Dictyostelium discoideum AX4] gi|60465061|gb|EAL63166.1| hypothetical protein DDB_G0288547 [Dictyostelium discoideum AX4] Length = 345 Score = 34.3 bits (79), Expect = 4.8, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 12/80 (15%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---FPNTLIFGDIAKI 59 + DLFCG GG + T N S +++P + + N + ++ +I + Sbjct: 174 TLVDLFCGAGGNTIQFSFTCN-----VVVSVDLDPMKLLMAKHNSWVYGHSSENTNIEFV 228 Query: 60 KTQDIP----DHDVLLAGFP 75 + + DV+ P Sbjct: 229 NSDAMNLSNLKADVIFLSPP 248 >gi|88602122|ref|YP_502300.1| hypothetical protein Mhun_0829 [Methanospirillum hungatei JF-1] gi|88187584|gb|ABD40581.1| methyltransferase [Methanospirillum hungatei JF-1] Length = 288 Score = 34.3 bits (79), Expect = 4.8, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 I D+F GIG L + + + + EINP +V + N Sbjct: 152 ICDMFAGIGYFTLPMAKAGGFIH-----ALEINPDAVHYLEKN 189 >gi|56419633|ref|YP_146951.1| hypothetical protein GK1098 [Geobacillus kaustophilus HTA426] gi|56379475|dbj|BAD75383.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 198 Score = 34.3 bits (79), Expect = 4.8, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 4/42 (9%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 DLF G GG L +E R +E + + +V+T + N Sbjct: 46 LDLFAGSGG--LGIEAL--SRGIERVIFVDQDRKAVQTVRKN 83 >gi|330988818|gb|EGH86921.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 292 Score = 34.3 bits (79), Expect = 4.9, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Query: 52 IFGDIAKI-KTQDIPDHDVLLAGFPCQPFSQAG 83 I D+ + + P+ D+++AG PC S+AG Sbjct: 13 ICADVRDVQRGSGTPECDLVVAGIPCTGASRAG 45 >gi|328706457|ref|XP_003243103.1| PREDICTED: hypothetical protein LOC100570687 [Acyrthosiphon pisum] Length = 426 Score = 34.3 bits (79), Expect = 5.1, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 18/80 (22%) Query: 5 TDLFCGIGG--IRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGD 55 D FCG GG I+L + +I+PY +K + N I G+ Sbjct: 265 LDPFCGAGGNIIQLAFTS-------NLVIAVDIDPYKIKLARNNAEIYGVAHKIEFIVGN 317 Query: 56 IAKIKTQDIPDHDVLLAGFP 75 +I + + DV+ P Sbjct: 318 FFEICS--MLKADVICMSPP 335 >gi|83589787|ref|YP_429796.1| methyltransferase small [Moorella thermoacetica ATCC 39073] gi|83572701|gb|ABC19253.1| Methyltransferase small [Moorella thermoacetica ATCC 39073] Length = 192 Score = 34.3 bits (79), Expect = 5.1, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 4/51 (7%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 DLF G G + LE R E N ++K AN T + G Sbjct: 46 FLDLFAGSG--AVGLEAL--SRGARRVVFVENNRQALKCLTANIKATGLEG 92 >gi|38233636|ref|NP_939403.1| HemK family methytransferase [Corynebacterium diphtheriae NCTC 13129] gi|38199896|emb|CAE49562.1| HemK-family methytransferase [Corynebacterium diphtheriae] Length = 272 Score = 34.3 bits (79), Expect = 5.1, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 15/85 (17%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPN--TLIFGDIAKIK 60 + DL G G L H + EC ++ E++ ++ + N P+ L+ GD+ Sbjct: 109 VVDLCTGSG----ALAAYIAHEHPECSVWAVELSDAAMAFARRNLPDRVHLVQGDVTD-- 162 Query: 61 TQDIPDH-----DVLLAGFPCQPFS 80 +I DH D+L++ P P S Sbjct: 163 -PEILDHLSGAVDLLVSNPPYVPLS 186 >gi|297161741|gb|ADI11453.1| HemK family modification methylase [Streptomyces bingchenggensis BCW-1] Length = 268 Score = 34.3 bits (79), Expect = 5.1, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAK-I 59 + DL CG G + L + ++++I P +V+ + N P + GD+ + + Sbjct: 99 VVDLCCGSGAVGAALITALGADSPIELYAADIEPAAVRCARRNIPADKGRVYEGDLYEPL 158 Query: 60 KTQDIPDHDVLLAGFP 75 DVL+A P Sbjct: 159 PAALRGRVDVLVANAP 174 >gi|325678315|ref|ZP_08157941.1| RNA methyltransferase, RsmD family [Ruminococcus albus 8] gi|324109995|gb|EGC04185.1| RNA methyltransferase, RsmD family [Ruminococcus albus 8] Length = 182 Score = 34.3 bits (79), Expect = 5.2, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 + DLF G G ++ +E + C F + NP +V+ + N + Sbjct: 45 VLDLFAGSG--QMGIEALSRDAS-HCVF-VDNNPAAVQVIKENISDC 87 >gi|110667583|ref|YP_657394.1| methyltransferase [Haloquadratum walsbyi DSM 16790] gi|109625330|emb|CAJ51752.1| predicted methyltransferase [Haloquadratum walsbyi DSM 16790] Length = 329 Score = 34.3 bits (79), Expect = 5.2, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 12/76 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDI 56 + D+F G+G R + + E+N +V+ N T++ GD+ Sbjct: 180 VIDMFAGVG----PFAVPMAARGADVVAA-ELNENAVEYLSINAEQNDVDDNFTIVSGDV 234 Query: 57 AKIKTQDIPDHDVLLA 72 + I D L+ Sbjct: 235 RTLPDSYIDWADRLIM 250 >gi|255549690|ref|XP_002515896.1| RNA m5u methyltransferase, putative [Ricinus communis] gi|223544801|gb|EEF46316.1| RNA m5u methyltransferase, putative [Ricinus communis] Length = 577 Score = 34.3 bits (79), Expect = 5.3, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 14/77 (18%) Query: 4 ITDLFCGIG--GIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQAN--FPNTLIFGDIA 57 + DLFCG G G+ L + + E S+ + + + N T + GD+ Sbjct: 426 VLDLFCGTGTIGLTLA-GRAKHVYGYEVVPQAISD----ARRNAELNGITNATFVQGDLN 480 Query: 58 KIKT---QDIPDHDVLL 71 KI + P D+++ Sbjct: 481 KISDSFGNNFPKPDIVI 497 >gi|221054550|ref|XP_002258414.1| met-10+ like protein [Plasmodium knowlesi strain H] gi|193808483|emb|CAQ39186.1| met-10+ like protein, putative [Plasmodium knowlesi strain H] Length = 698 Score = 34.3 bits (79), Expect = 5.4, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 12/50 (24%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF-FSSEINPYSVKTYQANFPNTLI 52 I DLF G+G L L + +C FS++IN ++ NF N I Sbjct: 407 IVDLFAGVGIFSLHLSKK------KCLCFSNDINSHA-----YNFMNVNI 445 >gi|84686808|ref|ZP_01014695.1| DNA methylase, C-5 cytosine-specific family protein [Maritimibacter alkaliphilus HTCC2654] gi|84665239|gb|EAQ11718.1| DNA methylase, C-5 cytosine-specific family protein [Rhodobacterales bacterium HTCC2654] Length = 336 Score = 34.3 bits (79), Expect = 5.5, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 10/16 (62%) Query: 66 DHDVLLAGFPCQPFSQ 81 + D++ G PCQ FS Sbjct: 7 ELDLVAGGPPCQGFSI 22 >gi|33620521|ref|NP_891714.1| hypothetical protein RB49p143 [Enterobacteria phage RB49] gi|33347988|gb|AAQ15389.1| hypothetical protein RB49ORF143w [Enterobacteria phage RB49] Length = 279 Score = 34.3 bits (79), Expect = 5.5, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 K+ DL GIG + + + C E+NP + + P I D+ + ++ Sbjct: 67 KVLDLCAGIGRLSFCMLHRCKPEKIVCV---ELNPEFARIGKRLLPEAEWITSDVFEFES 123 Query: 62 QDIPDHDVLLAGFP 75 + DV+++ P Sbjct: 124 NE--KFDVVISNPP 135 >gi|291336630|gb|ADD96176.1| methyltransferase [uncultured organism MedDCM-OCT-S05-C185] Length = 141 Score = 34.3 bits (79), Expect = 5.5, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 11/79 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-------FPNTLIFGDI 56 + D F G G L LE + E + ++KT + N +I D Sbjct: 50 VIDAFAGSG--ALGLEALSRGAALSI--FIENDQNALKTLEQNIRKLDYHHRARIIRADA 105 Query: 57 AKIKTQDIPDHDVLLAGFP 75 I + +++ P Sbjct: 106 CTIDIPATEEAGLVIMDPP 124 >gi|332185292|ref|ZP_08387041.1| RNA methyltransferase, RsmD family [Sphingomonas sp. S17] gi|332015016|gb|EGI57072.1| RNA methyltransferase, RsmD family [Sphingomonas sp. S17] Length = 178 Score = 34.3 bits (79), Expect = 5.6, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 8/76 (10%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 + D F G G L +E C F E + ++ +AN GD+ Sbjct: 48 VGDFFAGSG--ALGIEALSRGAG-SCLF-VEQDRNALDALRANLEKLGAKGDVRATSVMA 103 Query: 64 IPDH----DVLLAGFP 75 + DV+L P Sbjct: 104 LGPARQPLDVVLMDPP 119 >gi|157311444|ref|YP_001469487.1| putative methyltransferase [Enterobacteria phage Phi1] gi|149380648|gb|ABR24653.1| hypothetical protein phi1p143 [Enterobacteria phage Phi1] Length = 279 Score = 34.3 bits (79), Expect = 5.7, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 K+ DL GIG + + + C E+NP + + P I D+ + ++ Sbjct: 67 KVLDLCAGIGRLSFCMLHRCKPEKIVCV---ELNPEFARIGKRLLPEAEWITSDVFEFES 123 Query: 62 QDIPDHDVLLAGFP 75 + DV+++ P Sbjct: 124 NE--KFDVVISNPP 135 >gi|300122756|emb|CBK23320.2| unnamed protein product [Blastocystis hominis] Length = 290 Score = 34.3 bits (79), Expect = 5.7, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 14/78 (17%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-------YSVKTYQANFPNTLIFGDIA 57 D F GIGG + L +T S E+NP ++ K Y+ + I GD Sbjct: 125 IDAFAGIGGNTIQLARTCRR-----VISIELNPQRLRMLQHNSKIYKVDHKIDCICGDST 179 Query: 58 KIKTQDIPDHDVLLAGFP 75 K+ DV++ P Sbjct: 180 KLLPSM--KADVVVLAPP 195 >gi|300709636|ref|YP_003735450.1| methyltransferase [Halalkalicoccus jeotgali B3] gi|299123319|gb|ADJ13658.1| methyltransferase [Halalkalicoccus jeotgali B3] Length = 338 Score = 34.3 bits (79), Expect = 5.7, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 5/44 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 ++ D+F GIG L + + H + E NP + + N Sbjct: 190 RVLDMFAGIGYFTLPMARAGAH-----VSAIERNPVAFRYLLEN 228 >gi|26989748|ref|NP_745173.1| DNA cytosine methyltransferase family protein [Pseudomonas putida KT2440] gi|24984641|gb|AAN68637.1|AE016493_7 DNA cytosine methyltransferase family protein [Pseudomonas putida KT2440] Length = 609 Score = 34.3 bits (79), Expect = 5.7, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Query: 36 NPYSVKTYQANFPNTLIF-GDIAKIKTQDIP---DHDVLLAGFPCQPFSQA 82 NP ++ ++AN T + DI ++ + +L A C+ FS+A Sbjct: 52 NPIAIAVHRANHRKTRHYICDIYEVDPLEATGGQPVGILWASPDCRHFSKA 102 >gi|307352708|ref|YP_003893759.1| hypothetical protein Mpet_0547 [Methanoplanus petrolearius DSM 11571] gi|307155941|gb|ADN35321.1| protein of unknown function Met10 [Methanoplanus petrolearius DSM 11571] Length = 304 Score = 34.3 bits (79), Expect = 5.8, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 9/44 (20%) Query: 1 MLK----ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40 M+K + D+F G+G + L ++++INP +V Sbjct: 158 MMKDGERLLDMFAGVGPFAITLS-----GKCSVVYANDINPAAV 196 >gi|228476084|ref|ZP_04060792.1| ribosomal protein L11 methyltransferase [Staphylococcus hominis SK119] gi|314936301|ref|ZP_07843648.1| ribosomal protein L11 methyltransferase [Staphylococcus hominis subsp. hominis C80] gi|228269907|gb|EEK11387.1| ribosomal protein L11 methyltransferase [Staphylococcus hominis SK119] gi|313654920|gb|EFS18665.1| ribosomal protein L11 methyltransferase [Staphylococcus hominis subsp. hominis C80] Length = 312 Score = 34.3 bits (79), Expect = 5.9, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 10/68 (14%) Query: 9 CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD-- 66 GI L + V+ + +I+ +V + NF DI I + + Sbjct: 184 SGI------LSIASHLIGVKRIKALDIDEMAVGVAKENFRKNHCENDIEAIPGNLLKEEN 237 Query: 67 --HDVLLA 72 DV++A Sbjct: 238 EKFDVVIA 245 >gi|289192212|ref|YP_003458153.1| protein of unknown function Met10 [Methanocaldococcus sp. FS406-22] gi|288938662|gb|ADC69417.1| protein of unknown function Met10 [Methanocaldococcus sp. FS406-22] Length = 248 Score = 34.3 bits (79), Expect = 5.9, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 11/77 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNT--LIFGDIA 57 + D+F GIG + L + + + ++ E NP + + + N N I D Sbjct: 98 VVDMFAGIGYFTIPLAK---YSKPKLVYAIEKNPIAYHYLCENIKLNKLNNVIPILADNR 154 Query: 58 KIKTQDIPDHDVLLAGF 74 +++ +D+ D ++ G+ Sbjct: 155 EVELKDV--ADRVIMGY 169 >gi|300121728|emb|CBK22303.2| unnamed protein product [Blastocystis hominis] Length = 256 Score = 34.3 bits (79), Expect = 6.0, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 13/78 (16%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGD- 55 + DL+ GIG + + ++V CF EIN SV+ + N +I GD Sbjct: 99 VVDLYAGIGYFTIPIAVRSGAKHVLCF---EINSDSVEALKRNIDQNGVADRCEVILGDN 155 Query: 56 -IAKIKTQDIPDHDVLLA 72 I + +D+ D VLL Sbjct: 156 RITTRQYKDLADR-VLLG 172 >gi|238695024|ref|YP_002922218.1| hypothetical protein EpJSE_00146 [Enterobacteria phage JSE] gi|220029160|gb|ACL78095.1| hypothetical protein EpJSE_00146 [Enterobacteria phage JSE] Length = 279 Score = 34.3 bits (79), Expect = 6.0, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 K+ DL GIG + + + C E+NP + + P I D+ + ++ Sbjct: 67 KVLDLCAGIGRLSFCMLHRCKPEKIVCV---ELNPEFARIGKRLLPEAEWITSDVFEFES 123 Query: 62 QDIPDHDVLLAGFP 75 + DV+++ P Sbjct: 124 NE--KFDVVISNPP 135 >gi|83649040|ref|YP_437475.1| spermidine synthase [Hahella chejuensis KCTC 2396] gi|83637083|gb|ABC33050.1| spermidine synthase [Hahella chejuensis KCTC 2396] Length = 287 Score = 34.3 bits (79), Expect = 6.0, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 12/73 (16%) Query: 11 IGGIRLD-LEQTFNHRNVECFFSSEINPYSVKTYQANFPN----------TLIFGD-IAK 58 +GG L++ H VE + EI+ + + FP+ FGD I Sbjct: 87 VGGGDCGTLKEVLKHPGVEEAWQVEIDERVTRVAEKYFPDLCTANNDPRANFFFGDGIKW 146 Query: 59 IKTQDIPDHDVLL 71 I + D+++ Sbjct: 147 IADAPLESIDLII 159 >gi|126631930|gb|AAI34210.1| LOC100005455 protein [Danio rerio] Length = 275 Score = 34.3 bits (79), Expect = 6.1, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 K+ DL CG G C +++I+P + + N Sbjct: 127 KVLDLGCGCG----ASAIAARLSGASCVVANDIDPIAAIATKMN 166 >gi|261332311|emb|CBH15305.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 394 Score = 34.3 bits (79), Expect = 6.2, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 12/85 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGDI 56 + D+F GIG L L + V+ + E N YS N + GD Sbjct: 231 VVDMFAGIGYFTLPL---AINGGVKIVHALEKNKYSALYLAFNAVQNKVSDLIVIHCGDN 287 Query: 57 AKIKTQDIPDHDVLLAG--FPCQPF 79 + ++ D ++ G C+ F Sbjct: 288 RDMGSELCGRCDRVIMGYIPSCESF 312 >gi|238859529|ref|NP_001154967.1| methyltransferase-like protein 20 [Danio rerio] gi|206558236|sp|A3KP85|MET20_DANRE RecName: Full=Methyltransferase-like protein 20 Length = 258 Score = 34.0 bits (78), Expect = 6.3, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 K+ DL CG G C +++I+P + + N Sbjct: 110 KVLDLGCGCG----ASAIAARLSGASCVVANDIDPIAAIATKMN 149 >gi|319788722|ref|YP_004090037.1| methyltransferase [Ruminococcus albus 7] gi|315450589|gb|ADU24151.1| methyltransferase [Ruminococcus albus 7] Length = 182 Score = 34.0 bits (78), Expect = 6.3, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50 + DLF G G ++ +E + C F + NP +V+ + N + Sbjct: 45 VLDLFAGSG--QMGIE-ALSREASHCVF-VDNNPAAVQVIKENISDC 87 >gi|306835970|ref|ZP_07468962.1| RsmD family RNA methyltransferase [Corynebacterium accolens ATCC 49726] gi|304568136|gb|EFM43709.1| RsmD family RNA methyltransferase [Corynebacterium accolens ATCC 49726] Length = 200 Score = 34.0 bits (78), Expect = 6.4, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 11/80 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---DIAKI 59 K+ DLF G G L LE + E E NP +V + N G + K+ Sbjct: 46 KVLDLFAGSG--ALGLEALSRGAD-EAVL-VESNPAAVSIIKHNIGVVKHPGARVEERKV 101 Query: 60 KT--QDIPD--HDVLLAGFP 75 T P D++LA P Sbjct: 102 STYLASAPRGYFDLVLADPP 121 >gi|325290428|ref|YP_004266609.1| methyltransferase [Syntrophobotulus glycolicus DSM 8271] gi|324965829|gb|ADY56608.1| methyltransferase [Syntrophobotulus glycolicus DSM 8271] Length = 186 Score = 34.0 bits (78), Expect = 6.5, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 4/44 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 K+ DLF G G L LE R + E +P + + N Sbjct: 44 KVLDLFAGTG--NLGLEAL--SRGAQKVVLVEKDPMAWNIIKDN 83 >gi|251788451|ref|YP_003003172.1| 23S rRNA 5-methyluridine methyltransferase [Dickeya zeae Ech1591] gi|247537072|gb|ACT05693.1| RNA methyltransferase, TrmA family [Dickeya zeae Ech1591] Length = 444 Score = 34.0 bits (78), Expect = 6.5, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Query: 3 KITDLFCGIGGIRLDL-EQTFNHRNVECFFS 32 ++ DLFCG+G L L E+ VE + Sbjct: 295 RVLDLFCGMGNFTLPLAERAGRVVGVEGVAA 325 >gi|295646365|gb|ADG23068.1| DNA (cytosine-5)-methyltransferase 3a [Gadus morhua] Length = 130 Score = 34.0 bits (78), Expect = 6.5, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 3/31 (9%) Query: 54 GDIAKIKTQDIPD---HDVLLAGFPCQPFSQ 81 GD+ + + I + D+++ G PC S Sbjct: 19 GDVRNVTRKHIQEWGPFDLVIGGSPCNDLSI 49 >gi|167462077|ref|ZP_02327166.1| putative methyltransferase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 88 Score = 34.0 bits (78), Expect = 6.5, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 4/43 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF G GG L +E R +E +I S+ T + N Sbjct: 45 VLDLFAGTGG--LGIEAL--SRGMEKGIFVDIEKKSLDTIRHN 83 >gi|266619952|ref|ZP_06112887.1| N-6 DNA Methylase family protein [Clostridium hathewayi DSM 13479] gi|288868416|gb|EFD00715.1| N-6 DNA Methylase family protein [Clostridium hathewayi DSM 13479] Length = 1013 Score = 34.0 bits (78), Expect = 6.6, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 11/74 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61 I DL CG+G FN E + EI+ + K +P + GDI ++ Sbjct: 99 IADLTCGMGNF-------FNFLPAESNAYGCEIDHKAYKVAHYLYPKANIELGDIRTYES 151 Query: 62 QDIPDHDVLLAGFP 75 DI D ++ P Sbjct: 152 -DI-RFDFVIGNPP 163 >gi|300779423|ref|ZP_07089281.1| possible outer membrane protein [Chryseobacterium gleum ATCC 35910] gi|300504933|gb|EFK36073.1| possible outer membrane protein [Chryseobacterium gleum ATCC 35910] Length = 1178 Score = 34.0 bits (78), Expect = 6.6, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 3/25 (12%) Query: 46 NFPNTLIFGDIAKIKTQDIPDHDVL 70 NFP GDI I DI D D+L Sbjct: 293 NFPYE---GDINNINPNDIEDIDIL 314 >gi|13358092|ref|NP_078366.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762087|ref|YP_001752613.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920252|ref|ZP_02931618.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|186701746|ref|ZP_02971433.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|11356834|pir||D82880 cytosine-specific methyltransferase UU528 [imported] - Ureaplasma urealyticum gi|6899531|gb|AAF30941.1|AE002151_7 cytosine-specific methyltransferase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827664|gb|ACA32926.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902654|gb|EDT48943.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|186701017|gb|EDU19299.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 299 Score = 34.0 bits (78), Expect = 6.7, Method: Composition-based stats. Identities = 9/17 (52%), Positives = 10/17 (58%) Query: 67 HDVLLAGFPCQPFSQAG 83 D+L FPCQ S AG Sbjct: 15 IDLLTYSFPCQDLSTAG 31 >gi|239934324|ref|ZP_04691277.1| hypothetical protein SghaA1_39380 [Streptomyces ghanaensis ATCC 14672] gi|291442775|ref|ZP_06582165.1| gp77 [Streptomyces ghanaensis ATCC 14672] gi|291345670|gb|EFE72626.1| gp77 [Streptomyces ghanaensis ATCC 14672] Length = 228 Score = 34.0 bits (78), Expect = 6.8, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 11/76 (14%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 L++ DL C GG + + + +I + +P + D Sbjct: 13 LRVLDLCCCAGGASMG----YWLAGFDVVG-VDI------VDRPRYPFPFVRADAVTYAA 61 Query: 62 QDIPDHDVLLAGFPCQ 77 + D+L A +PCQ Sbjct: 62 EQGHRFDLLHASWPCQ 77 >gi|229820435|ref|YP_002881961.1| (Uracil-5)-methyltransferase [Beutenbergia cavernae DSM 12333] gi|229566348|gb|ACQ80199.1| (Uracil-5)-methyltransferase [Beutenbergia cavernae DSM 12333] Length = 405 Score = 34.0 bits (78), Expect = 6.8, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 8/71 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 ++ DL+ G G L L + E +P +V+ + N D ++ Sbjct: 260 RVLDLYSGAGLFTLPLADAVGADG--QVAAVEGDPAAVRDARRN------LHDRGQVDLH 311 Query: 63 DIPDHDVLLAG 73 DVL AG Sbjct: 312 GGSVADVLDAG 322 >gi|226363566|ref|YP_002781348.1| methyltransferase [Rhodococcus opacus B4] gi|226242055|dbj|BAH52403.1| putative methyltransferase [Rhodococcus opacus B4] Length = 260 Score = 34.0 bits (78), Expect = 6.8, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--PNTLIFGDI-AKIK 60 + DL CG G + +E ++ +I+P +V+ + N P + GD+ A + Sbjct: 99 VVDLCCGSG--AVGAALADTLDGIE-LYAVDIDPAAVRCARRNLAEPALVFEGDLYAPLP 155 Query: 61 TQDIPDHDVLLAGFP 75 + D+L+A P Sbjct: 156 SALRGRIDILVANAP 170 >gi|91205135|ref|YP_537490.1| N6-adenine-specific methylase [Rickettsia bellii RML369-C] gi|157827532|ref|YP_001496596.1| N6-adenine-specific methylase [Rickettsia bellii OSU 85-389] gi|91068679|gb|ABE04401.1| N6-adenine-specific methylase [Rickettsia bellii RML369-C] gi|157802836|gb|ABV79559.1| N6-adenine-specific methylase [Rickettsia bellii OSU 85-389] Length = 192 Score = 34.0 bits (78), Expect = 6.8, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 4/40 (10%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK 41 +K+ DLF G G L E +I+ +S+K Sbjct: 52 IKVLDLFAGSG--SLAFESLSRGAGFATL--IDIDAFSLK 87 >gi|221485878|gb|EEE24148.1| met-10 domain-containing protein, putative [Toxoplasma gondii GT1] Length = 814 Score = 34.0 bits (78), Expect = 6.8, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 4/43 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + D F G+G L L Q + +++ NP +V + N Sbjct: 518 VLDCFAGVGAFSLFLAQRRSCL----VLANDFNPNAVLCMKKN 556 >gi|237835061|ref|XP_002366828.1| met-10 domain-containing protein [Toxoplasma gondii ME49] gi|211964492|gb|EEA99687.1| met-10 domain-containing protein [Toxoplasma gondii ME49] gi|221503756|gb|EEE29440.1| met-10 domain-containing protein, putative [Toxoplasma gondii VEG] Length = 814 Score = 34.0 bits (78), Expect = 6.8, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 4/43 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + D F G+G L L Q + +++ NP +V + N Sbjct: 518 VLDCFAGVGAFSLFLAQRRSCL----VLANDFNPNAVLCMKKN 556 >gi|94502134|ref|ZP_01308635.1| 23S rRNA (uracil-5-)-methyltransferase [Oceanobacter sp. RED65] gi|94425736|gb|EAT10743.1| 23S rRNA (uracil-5-)-methyltransferase [Oceanobacter sp. RED65] Length = 448 Score = 34.0 bits (78), Expect = 6.9, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 5/44 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DLF G+G L L Q + E++ V Q N Sbjct: 307 TVLDLFAGLGNFTLPLAQHAKR-----VCAVELDKKMVADLQHN 345 >gi|224002032|ref|XP_002290688.1| hypothetical protein THAPSDRAFT_262512 [Thalassiosira pseudonana CCMP1335] gi|220974110|gb|EED92440.1| hypothetical protein THAPSDRAFT_262512 [Thalassiosira pseudonana CCMP1335] Length = 203 Score = 34.0 bits (78), Expect = 7.0, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 3/44 (6%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 ++ D++ GIG L H + E NP ++ + N Sbjct: 40 RVLDMYAGIGYYTLP---ALIHGKARHVTACEWNPNAIYALRYN 80 >gi|289581698|ref|YP_003480164.1| hypothetical protein Nmag_2032 [Natrialba magadii ATCC 43099] gi|289531251|gb|ADD05602.1| protein of unknown function Met10 [Natrialba magadii ATCC 43099] Length = 409 Score = 34.0 bits (78), Expect = 7.1, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 5/44 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 ++ D+F GIG L + + ++EINP + + N Sbjct: 231 RVFDMFAGIGYFTLPMARAGAQ-----VTATEINPTAFRYLLEN 269 >gi|197301676|ref|ZP_03166746.1| hypothetical protein RUMLAC_00402 [Ruminococcus lactaris ATCC 29176] gi|197299116|gb|EDY33646.1| hypothetical protein RUMLAC_00402 [Ruminococcus lactaris ATCC 29176] Length = 189 Score = 34.0 bits (78), Expect = 7.1, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 4/43 (9%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 DLF G GGI +E R + E NP +++ + N Sbjct: 45 FLDLFAGSGGI--GIEAL--SRGAKEAVFVEKNPKAMECIKEN 83 >gi|149422449|ref|XP_001520279.1| PREDICTED: similar to putative DNA methyltransferase, partial [Ornithorhynchus anatinus] Length = 343 Score = 34.0 bits (78), Expect = 7.1, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 12/18 (66%) Query: 66 DHDVLLAGFPCQPFSQAG 83 DV+L PCQPF++ G Sbjct: 90 SFDVMLMSPPCQPFTRTG 107 >gi|78485887|ref|YP_391812.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Thiomicrospira crunogena XCL-2] gi|78364173|gb|ABB42138.1| modification methylase, HemK family [Thiomicrospira crunogena XCL-2] Length = 310 Score = 34.0 bits (78), Expect = 7.2, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 10/79 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62 +I DL G G I L Q + V+ +I+P +++ Q N D+A Sbjct: 134 RILDLCTGSGCIGLASLQACPNATVDLV---DISPEALEVAQRNI-EMYHLDDVATAIQS 189 Query: 63 DI------PDHDVLLAGFP 75 D+ +D++++ P Sbjct: 190 DLFSALSGRKYDLIVSNPP 208 >gi|83854666|ref|ZP_00948196.1| DNA modification methylase M.NGOI [Sulfitobacter sp. NAS-14.1] gi|83842509|gb|EAP81676.1| DNA modification methylase M.NGOI [Sulfitobacter sp. NAS-14.1] Length = 254 Score = 34.0 bits (78), Expect = 7.2, Method: Composition-based stats. Identities = 10/16 (62%), Positives = 11/16 (68%) Query: 68 DVLLAGFPCQPFSQAG 83 D+L G PC PFS AG Sbjct: 2 DLLAGGLPCPPFSVAG 17 >gi|239826501|ref|YP_002949125.1| methyltransferase [Geobacillus sp. WCH70] gi|239806794|gb|ACS23859.1| methyltransferase [Geobacillus sp. WCH70] Length = 189 Score = 34.0 bits (78), Expect = 7.2, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 4/42 (9%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 DLF G GG L +E R ++ + + +V+T + N Sbjct: 46 LDLFSGSGG--LGIEAL--SRGLDRVIFVDHDAKAVQTVKKN 83 >gi|297619231|ref|YP_003707336.1| hypothetical protein Mvol_0704 [Methanococcus voltae A3] gi|297378208|gb|ADI36363.1| hypothetical protein Mvol_0704 [Methanococcus voltae A3] Length = 307 Score = 34.0 bits (78), Expect = 7.2, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 8/69 (11%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIAKI 59 + D FCG G L + + + S+IN ++ + NF N + + +I Sbjct: 198 VLDGFCGCG--TLGMVAL--KKGAKKVIFSDINDIALYDLEYNLKINFGNEIFENNRVEI 253 Query: 60 KTQDIPDHD 68 D D D Sbjct: 254 IHSDFMDLD 262 >gi|289422316|ref|ZP_06424166.1| RNA methyltransferase, RsmD family [Peptostreptococcus anaerobius 653-L] gi|289157261|gb|EFD05876.1| RNA methyltransferase, RsmD family [Peptostreptococcus anaerobius 653-L] Length = 186 Score = 34.0 bits (78), Expect = 7.4, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 16/78 (20%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------TLIFGD- 55 + DLF G G L +E R + + +P S+ ++N T+I GD Sbjct: 45 VLDLFSGSG--ALGIEAL--SRGASHVYFCDKDPKSIGVTKSNISKTKFEARSTVILGDY 100 Query: 56 ---IAKIKTQDIPDHDVL 70 I+ I ++ D++ Sbjct: 101 LKAISNISSKK-EKMDII 117 >gi|283856450|ref|YP_163055.2| Fmu (Sun) domain-containing protein [Zymomonas mobilis subsp. mobilis ZM4] gi|283775454|gb|AAV89944.2| Fmu (Sun) domain protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 408 Score = 34.0 bits (78), Expect = 7.4, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 10/17 (58%) Query: 2 LKITDLFCGIGGIRLDL 18 +K+ DL G GG L L Sbjct: 212 MKVIDLCAGAGGKSLAL 228 >gi|260752276|ref|YP_003225169.1| Fmu (Sun) domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551639|gb|ACV74585.1| Fmu (Sun) domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 408 Score = 34.0 bits (78), Expect = 7.4, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 10/17 (58%) Query: 2 LKITDLFCGIGGIRLDL 18 +K+ DL G GG L L Sbjct: 212 MKVIDLCAGAGGKSLAL 228 >gi|241761711|ref|ZP_04759798.1| Fmu (Sun) domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374019|gb|EER63552.1| Fmu (Sun) domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 408 Score = 34.0 bits (78), Expect = 7.4, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 10/17 (58%) Query: 2 LKITDLFCGIGGIRLDL 18 +K+ DL G GG L L Sbjct: 212 MKVIDLCAGAGGKSLAL 228 >gi|46447632|ref|YP_008997.1| putative 23S rRNA (Uracil-5-)-methyltransferase [Candidatus Protochlamydia amoebophila UWE25] gi|51316627|sp|Q6M9M7|Y1998_PARUW RecName: Full=Uncharacterized RNA methyltransferase pc1998 gi|46401273|emb|CAF24722.1| putative 23S rRNA (Uracil-5-)-methyltransferase [Candidatus Protochlamydia amoebophila UWE25] Length = 383 Score = 34.0 bits (78), Expect = 7.4, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 5/41 (12%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY 43 K+ + F G+G + L ++C EINP+S + + Sbjct: 241 KVVEFFAGVG--TIGLSVAAKCSWIKCE---EINPHSKECF 276 >gi|147771321|emb|CAN71866.1| hypothetical protein VITISV_027340 [Vitis vinifera] Length = 374 Score = 34.0 bits (78), Expect = 7.5, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 4/27 (14%) Query: 55 DIAKIKTQDIP-DHDVLLAGFPCQPFS 80 DI + +P D + G PCQ FS Sbjct: 27 DINNLP---LPGQVDFINGGPPCQGFS 50 >gi|6272296|gb|AAF06073.1|AF072715_4 putative methylase [Mycoplasma mycoides subsp. capri] Length = 390 Score = 34.0 bits (78), Expect = 7.5, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 3/30 (10%) Query: 55 DIAKIKTQDIPD-HDVLLAGFPCQPFSQAG 83 +I ++ T +P D+L FPCQ SQ G Sbjct: 134 NIKELNT--LPKNIDILTYSFPCQDISQQG 161 >gi|86133093|ref|ZP_01051675.1| conserved hypothetical protein [Polaribacter sp. MED152] gi|85819956|gb|EAQ41103.1| conserved hypothetical protein [Polaribacter sp. MED152] Length = 185 Score = 34.0 bits (78), Expect = 7.5, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 11/78 (14%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------DIA 57 + DLF G G I F R + ++ + N ++ Y N L D+ Sbjct: 47 VIDLFSGTGNISY----EFASRGTKNIYAIDANHNCIR-YIYNTAKELDLNINTYKSDVY 101 Query: 58 KIKTQDIPDHDVLLAGFP 75 K + D++ A P Sbjct: 102 KFLDKTTLQADIIFADPP 119 >gi|317403621|gb|EFV84109.1| modification methylase [Achromobacter xylosoxidans C54] Length = 670 Score = 34.0 bits (78), Expect = 7.5, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 7/83 (8%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT- 61 + D+F G GG E + P ++ +Q N P + D+ ++ Sbjct: 15 VVDIFAGGGGWSTAYEMATGQHVHIAINHN---PTALSMHQVNHPQAKHLIADVREVCPR 71 Query: 62 QDIPDHDV--LLAGFPCQPFSQA 82 Q +V L C SQA Sbjct: 72 QATGGAEVGWLHLSPDCTDHSQA 94 >gi|332652524|ref|ZP_08418269.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Ruminococcaceae bacterium D16] gi|332517670|gb|EGJ47273.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Ruminococcaceae bacterium D16] Length = 452 Score = 34.0 bits (78), Expect = 7.6, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 7/45 (15%) Query: 3 KITDLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQAN 46 + DL+CGIG I L L ++ E P +++ +AN Sbjct: 307 TVLDLYCGIGTISLALAQKAGRVIGAEIV------PQAIEDAKAN 345 >gi|297600571|ref|NP_001049442.2| Os03g0226800 [Oryza sativa Japonica Group] gi|255674328|dbj|BAF11356.2| Os03g0226800 [Oryza sativa Japonica Group] Length = 130 Score = 34.0 bits (78), Expect = 7.6, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 8/14 (57%) Query: 67 HDVLLAGFPCQPFS 80 DV+ G PCQ S Sbjct: 6 VDVICGGPPCQGIS 19 >gi|207108782|ref|ZP_03242944.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori HPKX_438_CA4C1] Length = 37 Score = 34.0 bits (78), Expect = 7.6, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 12/34 (35%), Gaps = 4/34 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI 35 L LF G G L EC ++EI Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEI 36 >gi|182437388|ref|YP_001825107.1| hypothetical protein SGR_3595 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465904|dbj|BAG20424.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 246 Score = 34.0 bits (78), Expect = 7.6, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 23/77 (29%), Gaps = 7/77 (9%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61 ++ D F IGG + F N ++ + Y + GD + Sbjct: 17 FRVLDAFSCIGGATRGYRRAFG-PNCHVTG---VDIQAQPDY---CGDVFHQGDAIEYIR 69 Query: 62 QDIPDHDVLLAGFPCQP 78 D + PCQ Sbjct: 70 AHGHKFDFIHVSPPCQG 86 >gi|294155814|ref|YP_003560198.1| bifunctional methyltransferase [Mycoplasma crocodyli MP145] gi|291600378|gb|ADE19874.1| bifunctional methyltransferase [Mycoplasma crocodyli MP145] Length = 241 Score = 34.0 bits (78), Expect = 7.7, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 13/79 (16%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK-----TYQANFPNTLIFGDI- 56 K+ DL CG G I + L+ FN++N++ S+I+ +++ T + N +I D+ Sbjct: 77 KVLDLCCGSGFIGIALK--FNNKNLQVTL-SDIDDNAIEQSKINTLENNVKVKIIKSDLF 133 Query: 57 AKIKTQDIPDHDVLLAGFP 75 I D +++ P Sbjct: 134 ENIDE----KFDCIISNPP 148 >gi|284163497|ref|YP_003401776.1| hypothetical protein Htur_0202 [Haloterrigena turkmenica DSM 5511] gi|284013152|gb|ADB59103.1| protein of unknown function Met10 [Haloterrigena turkmenica DSM 5511] Length = 416 Score = 34.0 bits (78), Expect = 7.7, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 5/44 (11%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 ++ D+F GIG L + + ++EINP + + N Sbjct: 242 RVFDMFAGIGYFTLPMARAGAR-----VTATEINPTAFRYLLEN 280 >gi|169618070|ref|XP_001802449.1| hypothetical protein SNOG_12223 [Phaeosphaeria nodorum SN15] gi|111059515|gb|EAT80635.1| hypothetical protein SNOG_12223 [Phaeosphaeria nodorum SN15] Length = 242 Score = 34.0 bits (78), Expect = 7.8, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 I D F G+GG + L ++ E F+ E + ++K + N Sbjct: 76 IVDAFAGVGGNAIALARSGR---WERVFAIEKDEKTMKCAKHN 115 >gi|300870865|ref|YP_003785736.1| yhhF N6 adenine specific methylase [Brachyspira pilosicoli 95/1000] gi|300688564|gb|ADK31235.1| yhhF N6 adenine specific methylase [Brachyspira pilosicoli 95/1000] Length = 182 Score = 34.0 bits (78), Expect = 7.9, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 25/80 (31%), Gaps = 11/80 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--IAKIK 60 DL G G + E R + EI+ +VKT N N I ++ Sbjct: 41 TFLDLCAGSG--AVGFEAL--SRGAKFAAFIEIDREAVKTIFTNAKNIFEENQYKIKRVS 96 Query: 61 TQDIPD-----HDVLLAGFP 75 D D++ P Sbjct: 97 ADDYVKRTNDTFDIIFFDPP 116 >gi|114771218|ref|ZP_01448638.1| short chain dehydrogenase [alpha proteobacterium HTCC2255] gi|114548143|gb|EAU51030.1| short chain dehydrogenase [alpha proteobacterium HTCC2255] Length = 254 Score = 34.0 bits (78), Expect = 7.9, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 9 CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL 51 G GI L + + + + +I+P +++T++ +PN+L Sbjct: 10 AGAAGIGLVIAKNYLAEGAK-VAICDIDPNAIQTFKKKYPNSL 51 >gi|15791245|ref|NP_281069.1| hypothetical protein VNG2475C [Halobacterium sp. NRC-1] gi|169237001|ref|YP_001690201.1| hypothetical protein OE4468F [Halobacterium salinarum R1] gi|10581873|gb|AAG20549.1| conserved hypothetical protein [Halobacterium sp. NRC-1] gi|167728067|emb|CAP14855.1| conserved hypothetical protein [Halobacterium salinarum R1] Length = 346 Score = 34.0 bits (78), Expect = 8.1, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 9/56 (16%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58 ++ D+F G+G L + + + E NP + + N D+A+ Sbjct: 189 RVLDMFAGVGYFALPMARAGA-----TVTAVEKNPTAFRFLAEN----AQLNDVAE 235 >gi|300022354|ref|YP_003754965.1| Fmu (Sun) domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299524175|gb|ADJ22644.1| Fmu (Sun) domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 431 Score = 33.6 bits (77), Expect = 8.3, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 10/80 (12%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-----PYSVKTYQANFPNTLIF--GDI 56 + DL G GG L L + ++ + + P + +AN N + GD Sbjct: 234 VLDLCAGAGGKTLALAALMQNTG--QLYAYDADRNQLKPIFDRIKRANVRNVQVLRAGDE 291 Query: 57 AKIKTQDIPDHDVLLAGFPC 76 + P DV+LA PC Sbjct: 292 TALAALG-PRFDVVLADAPC 310 >gi|323457292|gb|EGB13158.1| hypothetical protein AURANDRAFT_60512 [Aureococcus anophagefferens] Length = 1176 Score = 33.6 bits (77), Expect = 8.3, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Query: 50 TLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQA 82 + G++ ++ D+P D DVL + PCQ S+A Sbjct: 916 VPVEGNVCRLTAADVPADVDVLSSTGPCQDLSRA 949 >gi|330934993|ref|XP_003304787.1| hypothetical protein PTT_17463 [Pyrenophora teres f. teres 0-1] gi|311318443|gb|EFQ87106.1| hypothetical protein PTT_17463 [Pyrenophora teres f. teres 0-1] Length = 240 Score = 33.6 bits (77), Expect = 8.3, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN 46 I D F G+GG + L ++ E F+ E +P ++ + N Sbjct: 75 IIDAFAGVGGNSIALARSGR---WERVFAIEKDPKTLMCAKHN 114 >gi|189485569|ref|YP_001956510.1| putative N6-adenine-specific methylase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287528|dbj|BAG14049.1| putative N6-adenine-specific methylase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 200 Score = 33.6 bits (77), Expect = 8.4, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 13/80 (16%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63 DLF G G + +E R + +E++ S+ + N N L F D AKI D Sbjct: 49 FIDLFAGAG--SVGIEAL--SRGAKKVVFAELSDISLSLIKRN-VNMLGFNDKAKIVKCD 103 Query: 64 I--------PDHDVLLAGFP 75 I +D++ G P Sbjct: 104 IIKDFAVLQDKYDIIFMGPP 123 >gi|124485745|ref|YP_001030361.1| hypothetical protein Mlab_0923 [Methanocorpusculum labreanum Z] gi|124363286|gb|ABN07094.1| protein of unknown function Met10 [Methanocorpusculum labreanum Z] Length = 289 Score = 33.6 bits (77), Expect = 8.5, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 5/52 (9%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54 +I D+F GIG L + + EINP S + N + G Sbjct: 152 RIADMFAGIGYFTLSAALAGGN-----VHAVEINPVSFAYLEKNIEANDLAG 198 >gi|91792550|ref|YP_562201.1| 23S rRNA 5-methyluridine methyltransferase [Shewanella denitrificans OS217] gi|123166314|sp|Q12PZ8|RUMA_SHEDO RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumA; AltName: Full=23S rRNA(M-5-U1939)-methyltransferase gi|91714552|gb|ABE54478.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Shewanella denitrificans OS217] Length = 468 Score = 33.6 bits (77), Expect = 8.6, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%) Query: 3 KITDLFCGIGGIRLDLEQTFNHR-NVECFF 31 ++ DLFCG+G L L + +E Sbjct: 320 RVLDLFCGVGNFSLALANRGQNLDGLEVIG 349 >gi|68655480|emb|CAJ01710.1| putative cytosine-5 DNA methyltransferase [Hordeum vulgare subsp. vulgare] Length = 251 Score = 33.6 bits (77), Expect = 8.6, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 11/53 (20%) Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80 +C +SE + K + N N + G++ I G PCQ FS Sbjct: 35 DCVSTSEAAEQAAKLAEENIKNLPVPGEVEFIN-----------GGPPCQGFS 76 >gi|45358648|ref|NP_988205.1| hypothetical protein MMP1085 [Methanococcus maripaludis S2] gi|45047514|emb|CAF30641.1| conserved hypothetical protein [Methanococcus maripaludis S2] Length = 224 Score = 33.6 bits (77), Expect = 8.8, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Query: 34 EINPYSVKTYQANFPNTLIFGDI--AKIKTQDIP-DHDVLLAGFP 75 +I+ ++KT + N N + +GDI K I D+++ FP Sbjct: 65 DISKDAIKTLKENGINNIFYGDIVKNKYDKHIISQKFDIII--FP 107 >gi|294055588|ref|YP_003549246.1| ribosomal L11 methyltransferase [Coraliomargarita akajimensis DSM 45221] gi|293614921|gb|ADE55076.1| ribosomal L11 methyltransferase [Coraliomargarita akajimensis DSM 45221] Length = 299 Score = 33.6 bits (77), Expect = 8.9, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 3/39 (7%) Query: 5 TDLF-CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT 42 DLF G G L L + ++ + +P +++ Sbjct: 155 IDLFDAGCGSGILALSAAV--LGFKNLYAFDFDPEAIRV 191 >gi|228470077|ref|ZP_04054986.1| conserved hypothetical protein [Porphyromonas uenonis 60-3] gi|228308215|gb|EEK17070.1| conserved hypothetical protein [Porphyromonas uenonis 60-3] Length = 186 Score = 33.6 bits (77), Expect = 9.1, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 12/17 (70%) Query: 2 LKITDLFCGIGGIRLDL 18 +++ DLF GIG I L+ Sbjct: 45 MRVLDLFAGIGSISLEF 61 >gi|254458892|ref|ZP_05072316.1| hypothetical protein CBGD1_2030 [Campylobacterales bacterium GD 1] gi|207084658|gb|EDZ61946.1| hypothetical protein CBGD1_2030 [Campylobacterales bacterium GD 1] Length = 218 Score = 33.6 bits (77), Expect = 9.1, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 12/66 (18%) Query: 13 GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDH---DV 69 GI + + + VE + +I+ + N N DI DIP++ D+ Sbjct: 45 GISGGMTKYYLENGVEVIGA-DIDKNA-----KNQCNVFFHQDIKN---SDIPENVKPDL 95 Query: 70 LLAGFP 75 ++ P Sbjct: 96 IIMNPP 101 >gi|150402156|ref|YP_001329450.1| RNA methyltransferase-like protein [Methanococcus maripaludis C7] gi|150033186|gb|ABR65299.1| RNA methyltransferase related protein [Methanococcus maripaludis C7] Length = 295 Score = 33.6 bits (77), Expect = 9.1, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 9/65 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIAKI 59 + D FCG G L L + + S+INP+++K + NF + I I Sbjct: 200 VIDGFCGSG--TLGL--AALKKGAKKVIFSDINPHALKDVIYNLKLNFSKEVFER-IEII 254 Query: 60 KTQDI 64 + + Sbjct: 255 NSDFL 259 >gi|169544173|ref|YP_001692948.1| methylase [Yersinia enterocolitica] gi|168218357|emb|CAP20100.1| methylase [Yersinia enterocolitica] Length = 481 Score = 33.6 bits (77), Expect = 9.4, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 8/90 (8%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN---PYSVKTYQAN---FPNT--LIF 53 + + +LF G G + F ++ S + Y + + N F +I Sbjct: 142 MNVCELFYGYGVLARSAHDGFKSNGIKLKNSVIVERERKYIDASIEMNPDMFDAESIIIE 201 Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 I + ++ D+L AG PC S++G Sbjct: 202 SAIQDVDIKNKMKVDLLFAGIPCTGASKSG 231 >gi|150399068|ref|YP_001322835.1| RNA methyltransferase-like protein [Methanococcus vannielii SB] gi|150011771|gb|ABR54223.1| RNA methyltransferase related protein [Methanococcus vannielii SB] Length = 293 Score = 33.6 bits (77), Expect = 9.5, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 10/72 (13%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKI 59 + D FCG G L + + E S+IN + + + NF + + D +I Sbjct: 198 VLDGFCGSG--TLGM--AALKKGAEKVIFSDINKNALDDVIYNLKLNFGDDVF--DKVEI 251 Query: 60 KTQDIPDHDVLL 71 D + DV Sbjct: 252 IHSDFLELDVTC 263 >gi|307330098|ref|ZP_07609248.1| hypothetical protein StrviDRAFT_6933 [Streptomyces violaceusniger Tu 4113] gi|306884241|gb|EFN15277.1| hypothetical protein StrviDRAFT_6933 [Streptomyces violaceusniger Tu 4113] Length = 2641 Score = 33.6 bits (77), Expect = 9.5, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 14/85 (16%) Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64 ++F G GG+ + + E N + T + +I D+ + Sbjct: 1858 VEIFGGPGGMSAA--RALVDPGGDWVL-IEFNRDAADT-ARAAGHFVICADVRTLD---- 1909 Query: 65 PDHDVLL------AGFPCQPFSQAG 83 P H VL PCQ S AG Sbjct: 1910 PRHPVLTRVLRFHGSPPCQTLSDAG 1934 >gi|157164811|ref|YP_001466806.1| ferredoxin, 4Fe-4S [Campylobacter concisus 13826] gi|157101475|gb|EAT98613.2| phage integrase [Campylobacter concisus 13826] Length = 288 Score = 33.6 bits (77), Expect = 9.5, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Query: 40 VKTYQANFPNTLIFGDIAKIKTQDIPDH--DVL 70 + TY +F N+L DI +I DI D++ Sbjct: 25 IATYNKHFKNSLGLRDIREINFIDIQKFCNDLI 57 >gi|317008727|gb|ADU79307.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori India7] Length = 39 Score = 33.6 bits (77), Expect = 9.6, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 12/34 (35%), Gaps = 4/34 (11%) Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI 35 L LF G G L EC ++EI Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEI 36 >gi|291548836|emb|CBL25098.1| hypothetical protein RTO_03240 [Ruminococcus torques L2-14] Length = 48 Score = 33.6 bits (77), Expect = 9.6, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 6 DLFCGIGGIRLDLEQTFNHRNV--ECFFS 32 DLF G+ GIRL +Q + + EC FS Sbjct: 9 DLFVGLDGIRLGFQQAMDGLELETECVFS 37 >gi|115400383|ref|XP_001215780.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114191446|gb|EAU33146.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 173 Score = 33.6 bits (77), Expect = 9.6, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 13/82 (15%) Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFGD- 55 + D F G GG + ++ + ++ E NP + + N T GD Sbjct: 12 LIDAFAGAGGNAIAFARSGKWKR---IYAIEKNPSVLLCAKHNAKIYGVADKITWFEGDC 68 Query: 56 --IAKIKTQDIPDHDVLLAGFP 75 I K + +D+ + V+ A P Sbjct: 69 FEIIKNQLKDLAPYSVVFASPP 90 >gi|192823983|ref|YP_001994629.1| gp82 [Mycobacterium phage Jasper] gi|190610578|gb|ACE80097.1| gp82 [Mycobacterium phage Jasper] Length = 218 Score = 33.6 bits (77), Expect = 9.8, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 17/38 (44%) Query: 46 NFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83 N+P D + T+ + D + A PCQ +S G Sbjct: 36 NYPFEFYQADALEFLTEHGREFDAIHASPPCQHYSSLG 73 >gi|149199045|ref|ZP_01876085.1| ribosomal protein L11 methyltransferase [Lentisphaera araneosa HTCC2155] gi|149137834|gb|EDM26247.1| ribosomal protein L11 methyltransferase [Lentisphaera araneosa HTCC2155] Length = 298 Score = 33.6 bits (77), Expect = 9.8, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 12/69 (17%) Query: 2 LKITDLFCGIG-GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60 + D G G GI L + + + +P +V + +F DI + Sbjct: 161 MSFLD--AGCGSGI---LSLAADRLGCSPVEAFDYDPEAVDCTKRHFD------DIDALD 209 Query: 61 TQDIPDHDV 69 D+ D+ Sbjct: 210 RIDVFQADL 218 >gi|260439323|ref|ZP_05793139.1| hypothetical protein BUTYVIB_02405 [Butyrivibrio crossotus DSM 2876] gi|292808333|gb|EFF67538.1| hypothetical protein BUTYVIB_02405 [Butyrivibrio crossotus DSM 2876] Length = 422 Score = 33.6 bits (77), Expect = 9.9, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 5/37 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39 K+ D+FCG G + LE ++ + + +INP + Sbjct: 62 KVADIFCGCG--TVALESKIHNYDF---WGCDINPVA 93 >gi|290559902|gb|EFD93224.1| protein of unknown function Met10 [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 258 Score = 33.6 bits (77), Expect = 9.9, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 11/79 (13%) Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------FGDI 56 K+ D+FCG+G + + + N + +IN ++ + N I GD Sbjct: 111 KVLDMFCGVGPFAIPIAKKCTEVN-----AIDINKIAINLLKKNIELNKIKNIRYYCGDS 165 Query: 57 AKIKTQDIPDHDVLLAGFP 75 KI D ++ FP Sbjct: 166 KKIIKGLDEKFDRIIMNFP 184 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.315 0.216 0.865 Lambda K H 0.267 0.0658 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,283,171,213 Number of Sequences: 14124377 Number of extensions: 115639341 Number of successful extensions: 335013 Number of sequences better than 10.0: 4305 Number of HSP's better than 10.0 without gapping: 3807 Number of HSP's successfully gapped in prelim test: 2600 Number of HSP's that attempted gapping in prelim test: 322599 Number of HSP's gapped (non-prelim): 6872 length of query: 83 length of database: 4,842,793,630 effective HSP length: 54 effective length of query: 29 effective length of database: 4,080,077,272 effective search space: 118322240888 effective search space used: 118322240888 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.4 bits) S2: 77 (33.6 bits)