BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780516|ref|YP_003064929.1| type II modification
methyltransferase [Candidatus Liberibacter asiaticus str. psy62]
(83 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|319407456|emb|CBI81106.1| Cytosine-specific methyltransferase NlaX [Bartonella sp. 1-1C]
Length = 307
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/83 (59%), Positives = 61/83 (73%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M +I DLF GIGGIRL E F N +C F+SEI+ YS++TY+ NF N + GDI +I
Sbjct: 1 MYRIIDLFAGIGGIRLGFESAFGLNNTQCIFTSEIDKYSIQTYKLNFNNDYVHGDITQIH 60
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
++IP HD+LLAGFPCQPFSQAG
Sbjct: 61 EEEIPKHDILLAGFPCQPFSQAG 83
>gi|313667524|ref|YP_004047808.1| cytosine-specific methyltransferase [Neisseria lactamica ST-640]
gi|309378245|emb|CBX23130.1| DNA cytosine methyltransferase M.NlaX [Neisseria lactamica
Y92-1009]
gi|313004986|emb|CBN86414.1| cytosine-specific methyltransferase [Neisseria lactamica 020-06]
Length = 313
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 53/83 (63%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M KI DLF GIGGIRL EQ F+ V C FSSEI+ Y+V+TYQAN + GDI +
Sbjct: 1 MFKIIDLFAGIGGIRLGFEQAFD--GVRCVFSSEIDKYAVQTYQANHGGETVCGDITQTD 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+LLAGFPCQPFSQAG
Sbjct: 59 VADIPDHDILLAGFPCQPFSQAG 81
>gi|261400948|ref|ZP_05987073.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970]
gi|269209191|gb|EEZ75646.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970]
Length = 313
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/83 (63%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M KI DLF GIGGIRL EQ F+ V C FSSEI+ Y+V+TYQAN + GDI +
Sbjct: 1 MFKIIDLFAGIGGIRLGFEQAFDD--VRCVFSSEIDKYAVQTYQANHGGETVCGDITQTD 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+LLAGFPCQPFSQAG
Sbjct: 59 VADIPDHDILLAGFPCQPFSQAG 81
>gi|127471|sp|P24581|MTNX_NEILA RecName: Full=Cytosine-specific methyltransferase NlaX;
Short=M.NlaX
gi|45004|emb|CAA38357.1| cytosine-specific methyltransferase of NlaIII [Neisseria
lactamica]
Length = 313
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 52/83 (62%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M KI DLF GIGGIRL EQ F+ V C FSSEI+ Y+V+TYQAN + GDI +
Sbjct: 1 MFKIIDLFAGIGGIRLGFEQAFDD--VRCVFSSEIDKYAVQTYQANHGGETVCGDITQTD 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+L AGFPCQPFSQAG
Sbjct: 59 VADIPDHDILSAGFPCQPFSQAG 81
>gi|125974805|ref|YP_001038715.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC
27405]
gi|125715030|gb|ABN53522.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC
27405]
Length = 334
Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ LF G GG+ + LE + ++++I+ + TY+ ++ GDIAKI
Sbjct: 15 YTVASLFAGAGGLDMGLELA----GFKTVWANDIDKDACATYRLWSQADVVQGDIAKIDY 70
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+PD DV+ GFPCQ FS AG
Sbjct: 71 SDVPDTDVITGGFPCQGFSLAG 92
>gi|110643908|ref|YP_671638.1| putative type II 5-cytosoine methyltransferase [Escherichia coli
536]
gi|110345500|gb|ABG71737.1| putative type II 5-cytosoine methyltransferase [Escherichia coli
536]
Length = 315
Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+K+ LF G GG+ L + + ++++I+ +V TY+ N + ++ D+++I
Sbjct: 1 MMKVVSLFSGAGGLDLGFKNA----GFQIVWANDIDSDAVLTYKKNIGDHIVLKDLSQID 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
DIPD DV++ GFPCQ FSQA
Sbjct: 57 MDDIPDCDVVIGGFPCQGFSQA 78
>gi|159027151|emb|CAO86782.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 347
Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M DLF GIGG R+ LE + +C FSSEI+P+S K Y AN+ + DI K++
Sbjct: 1 MWTFIDLFAGIGGFRIALE----NLGCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKLE 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ +PDHD+L GFPCQ FS AG
Sbjct: 57 AKTVPDHDILCGGFPCQAFSIAG 79
>gi|150026187|ref|YP_001297013.1| type II modification methyltransferase [Flavobacterium
psychrophilum JIP02/86]
gi|149772728|emb|CAL44211.1| Probable type II modification methyltransferase [Flavobacterium
psychrophilum JIP02/86]
Length = 335
Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 50/82 (60%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI DLF GIGGIRL E + N+EC F+SE N YS +TY AN+PN ++ GDI +I
Sbjct: 7 IKIIDLFAGIGGIRLGFELASKN-NIECVFTSEWNKYSEQTYLANYPNEIVHGDITQISE 65
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP+HD+LLAGFPCQPFSQAG
Sbjct: 66 TQIPEHDILLAGFPCQPFSQAG 87
>gi|289423024|ref|ZP_06424844.1| putative site-specific DNA-methyltransferase [Peptostreptococcus
anaerobius 653-L]
gi|289156598|gb|EFD05243.1| putative site-specific DNA-methyltransferase [Peptostreptococcus
anaerobius 653-L]
Length = 706
Score = 97.3 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK DLF GIGG RL E +C FSSEI+ ++ + Y+ DI ++
Sbjct: 6 LKFIDLFAGIGGFRLGFENA----GCKCVFSSEIDDHACEMYE-LNFGENPRCDITQLNP 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIPD D+L AGFPCQ FS G
Sbjct: 61 KDIPDFDILCAGFPCQAFSICG 82
>gi|331002097|ref|ZP_08325616.1| hypothetical protein HMPREF0491_00478 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411191|gb|EGG90607.1| hypothetical protein HMPREF0491_00478 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 706
Score = 96.9 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK DLF GIGG RL E +C FSSEI+ ++ + Y+ DI K+
Sbjct: 6 LKFIDLFAGIGGFRLGFEDA----GCKCVFSSEIDEHACEMYE-LNFGENPKCDITKLNI 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIPD D+L AGFPCQ FS G
Sbjct: 61 KDIPDFDILCAGFPCQAFSICG 82
>gi|326566077|gb|EGE16234.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC1]
Length = 354
Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
LK+ LF G GG+ L FN E F+++I + +TYQ NF + +I
Sbjct: 22 LKVISLFSGCGGMDLGFIGDFNSLGNFYPKQPFEIIFANDIFEKACQTYQHNFNHNIICQ 81
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI+ I DIP D+++ GFPCQ FS AG
Sbjct: 82 DISTIDDTDIPKADIVIGGFPCQDFSLAG 110
>gi|326559503|gb|EGE09926.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 7169]
Length = 354
Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
LK+ LF G GG+ L FN E F+++I + +TYQ NF + +I
Sbjct: 22 LKVISLFSGCGGMDLGFIGNFNSLGNFYPKQPFEIIFANDIFEKACQTYQHNFNHNIICQ 81
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI+ I DIP D+++ GFPCQ FS AG
Sbjct: 82 DISTIDDGDIPKADIVIGGFPCQDFSLAG 110
>gi|166368121|ref|YP_001660394.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa
NIES-843]
gi|166090494|dbj|BAG05202.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa
NIES-843]
Length = 347
Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M DLF G+GG R+ LE + +C FSSEI+P+S K Y AN+ + DI K++
Sbjct: 1 MWTFIDLFAGVGGFRIALE----NLGCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKLE 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ +PDHD+L GFPCQ FS AG
Sbjct: 57 AKTVPDHDILCGGFPCQAFSIAG 79
>gi|218439218|ref|YP_002377547.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
gi|218171946|gb|ACK70679.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
Length = 323
Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+++ LF G GG+ L E ++++I+ + +TYQ N + +I DI I
Sbjct: 1 MIRVVSLFSGCGGMDLGFIWA----GYEIVWANDIDHDACETYQLNIGDHIIEDDIKNIN 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81
+ +P+ D++L GFPCQ FS
Sbjct: 57 FKHLPECDLILGGFPCQDFSM 77
>gi|326567273|gb|EGE17393.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 12P80B1]
gi|326568220|gb|EGE18302.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC8]
Length = 354
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
LK+ LF G GG+ L FN E F+++I + +TYQ NF + +I
Sbjct: 22 LKVISLFSGCGGMDLGFIGNFNSLGNFYPKQPFEIIFANDIFEKACQTYQHNFNHNIICQ 81
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI+ I DIP D+++ GFPCQ FS AG
Sbjct: 82 DISTIDDGDIPKADIVIGGFPCQDFSLAG 110
>gi|1171048|sp|P25263|MTC1_HERAU RecName: Full=Modification methylase HgiCI; Short=M.HgiCI;
AltName: Full=Cytosine-specific methyltransferase HgiCI
gi|515372|emb|CAA38933.1| methyltransferase [Herpetosiphon aurantiacus]
Length = 420
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/85 (52%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAK 58
MLK DLF GIGG+RL EQ + +E C SSEI+ ++ TY NF + GDI +
Sbjct: 1 MLKFIDLFAGIGGMRLGFEQAMHELGIETACVLSSEIDKHAQTTYAMNF-HEQSQGDITQ 59
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
I QD P D LLAGFPCQPFS AG
Sbjct: 60 I--QDFPSFDFLLAGFPCQPFSYAG 82
>gi|328947602|ref|YP_004364939.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
gi|328447926|gb|AEB13642.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
Length = 431
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/83 (51%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60
DLF GIGGIR EQ +C F+SE + ++ KTY N+P+ DI K+
Sbjct: 75 FTFIDLFAGIGGIRKGFEQA----GGKCVFTSEWDEFAQKTYSNNYPSKCPINGDITKVN 130
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+DIPDHDVLLAGFPCQPFS AG
Sbjct: 131 AEDIPDHDVLLAGFPCQPFSIAG 153
>gi|332188292|ref|ZP_08390019.1| DNA-cytosine methyltransferase family protein [Sphingomonas sp.
S17]
gi|332011688|gb|EGI53766.1| DNA-cytosine methyltransferase family protein [Sphingomonas sp.
S17]
Length = 423
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/83 (55%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60
DLF GIGGIRL E C F+SE + Y+ KTY NF I GDI K+
Sbjct: 71 FTFIDLFAGIGGIRLGFEAA----GGRCVFTSEWDKYAQKTYIENFGEEHEIAGDITKVD 126
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPDHDVLLAGFPCQPFS AG
Sbjct: 127 ADDIPDHDVLLAGFPCQPFSLAG 149
>gi|2765225|emb|CAA73243.1| methylase [Lactococcus lactis subsp. cremoris]
Length = 317
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
MLKI F G+GGI L E + +++E + Y+ T++ NF + DI ++
Sbjct: 1 MLKIASFFAGVGGIDLGFENA----GFKTIYANEFDNYAADTFEMNFDVKVDRRDINDVQ 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+IPD D++LAGFPCQ FS AG
Sbjct: 57 ADEIPDFDIMLAGFPCQAFSIAG 79
>gi|269123998|ref|YP_003306575.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
gi|268315324|gb|ACZ01698.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
Length = 438
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/84 (53%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF G+GGIR+ EQ FN + EC FSSEI +++ +Y F + I GDI +I
Sbjct: 17 IKFIDLFAGLGGIRIGFEQAFNTLGISTECVFSSEIKKHAILSYTKYFGDYKIHGDIKEI 76
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
DIPD D LLAGFPCQPFS AG
Sbjct: 77 SVDDIPDFDFLLAGFPCQPFSSAG 100
>gi|307152045|ref|YP_003887429.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306982273|gb|ADN14154.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 323
Score = 94.6 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+K+ LF G GG+ L + + ++++I+ + +TY+ N + +I D+ I
Sbjct: 1 MIKVISLFSGCGGMDLGFKWA----GYQIIWANDIDHDACETYKRNIGDHIIKDDVKNIN 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81
+ +PD D++L GFPCQ FS
Sbjct: 57 FEQLPDCDLILGGFPCQDFSM 77
>gi|229126345|ref|ZP_04255362.1| Cytosine-specific methyltransferase [Bacillus cereus BDRD-Cer4]
gi|228657116|gb|EEL12937.1| Cytosine-specific methyltransferase [Bacillus cereus BDRD-Cer4]
Length = 363
Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK+ LF G GG+ L LEQ E ++++++ ++V+ Y+ N + DI KI
Sbjct: 8 LKVVSLFSGCGGLDLGLEQA----GFEILWANDVDKHAVEIYKHNIGKIVEG-DITKISE 62
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++IP DVL AGFPCQPFS AG
Sbjct: 63 EEIPSCDVLTAGFPCQPFSSAG 84
>gi|30019096|ref|NP_830727.1| Type II restriction-modification system methylation subunit
[Bacillus cereus ATCC 14579]
gi|29894639|gb|AAP07928.1| Type II restriction-modification system methylation subunit
[Bacillus cereus ATCC 14579]
Length = 373
Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK+ LF G GG+ L LEQ E ++++++ ++V+ Y+ N + DI KI
Sbjct: 18 LKVVSLFSGCGGLDLGLEQA----GFEILWANDVDKHAVEIYKHNIGKIVEG-DITKISE 72
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++IP DVL AGFPCQPFS AG
Sbjct: 73 EEIPSCDVLTAGFPCQPFSSAG 94
>gi|300869073|ref|ZP_07113674.1| Cytosine-specific methyltransferase (fragment) [Oscillatoria sp.
PCC 6506]
gi|300332930|emb|CBN58870.1| Cytosine-specific methyltransferase (fragment) [Oscillatoria sp.
PCC 6506]
Length = 345
Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K DLF GIGG R E EC FS E++ + + Y NF + FGDI +
Sbjct: 1 MKFIDLFAGIGGFRQGFENA----GFECVFSCEVDKHCREVYSNNFN-EVPFGDIKDVNP 55
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+I D DVL+AGFPCQPFS G
Sbjct: 56 HEIEDFDVLVAGFPCQPFSICG 77
>gi|24527985|emb|CAD33712.1| putative DNA methylase [Escherichia coli]
Length = 314
Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF G GG+ L + + ++++I+ +V TY+ N + ++ D+++I
Sbjct: 1 MKVVSLFSGAGGLDLGFKNA----GFQIVWANDIDSDAVLTYKKNIGDHIVLRDLSQIDM 56
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
DIPD DV++ GFPCQ FSQA
Sbjct: 57 DDIPDCDVVIGGFPCQGFSQA 77
>gi|296313699|ref|ZP_06863640.1| modification methylase NgoBI [Neisseria polysaccharea ATCC 43768]
gi|296839717|gb|EFH23655.1| modification methylase NgoBI [Neisseria polysaccharea ATCC 43768]
Length = 315
Score = 93.8 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 44/83 (53%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K DLF GIGGIRL E FSSE + Y+ + Y+ANF DI I
Sbjct: 1 MYKTIDLFSGIGGIRLGFE----KYGCTNVFSSEWDKYARQMYEANFGEKPFG-DINGID 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+LLAGFPCQPFS AG
Sbjct: 56 PSDIPDHDILLAGFPCQPFSIAG 78
>gi|254804105|ref|YP_003082326.1| putative type II DNA modification methyltransferase [Neisseria
meningitidis alpha14]
gi|254667647|emb|CBA03458.1| putative type II DNA modification methyltransferase [Neisseria
meningitidis alpha14]
Length = 315
Score = 93.8 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 44/83 (53%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K DLF GIGGIRL E FSSE + Y+ + Y+ANF DI I
Sbjct: 1 MYKTIDLFSGIGGIRLGFE----KYGCTNVFSSEWDKYARQMYEANFGEKPFG-DINGID 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+LLAGFPCQPFS AG
Sbjct: 56 PSDIPDHDILLAGFPCQPFSIAG 78
>gi|5420107|emb|CAB46561.1| cytosine-specific methyltransferase [Streptococcus thermophilus]
Length = 316
Score = 93.8 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML + F G+GGI L E+ + +++E + Y+ T++ NF T+ DI +
Sbjct: 1 MLTVASFFAGVGGIDLGFEKA----GFKTIYANEFDNYAADTFELNFDVTVDRRDINTVP 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+DIP+ DV+LAGFPCQ FS AG
Sbjct: 57 AEDIPNFDVMLAGFPCQAFSIAG 79
>gi|295110825|emb|CBL24778.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162]
Length = 311
Score = 93.8 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI LF G GG+ L L Q N E ++++I+ +V TY+ N + ++ DI I
Sbjct: 1 MKIISLFSGAGGLDLGLIQAGN----EVIWANDIDKDAVATYRENIGDHIVCDDIKNINI 56
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
D+P+ DV++ GFPCQ FS A
Sbjct: 57 YDLPEADVVVGGFPCQGFSLA 77
>gi|291320332|ref|YP_003515594.1| modification methylase Bsp6I [Mycoplasma agalactiae]
gi|290752665|emb|CBH40638.1| Modification methylase Bsp6I [Mycoplasma agalactiae]
Length = 315
Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K+ LF G+GGI L EQT + +++E + ++ TY++NF + DI K+
Sbjct: 1 MYKVGSLFAGVGGIDLGFEQTGK---FKTIWANEFDKNAILTYKSNFSTFVSNEDIRKVD 57
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+DIP+ D++L+GFPC FS AG
Sbjct: 58 VRDIPEVDIILSGFPCTSFSVAG 80
>gi|312281368|ref|YP_004022731.1| DNA-cytosine methyltransferase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181897|gb|ADQ42066.1| DNA-cytosine methyltransferase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 319
Score = 93.5 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+++ LF G+GGI L +Q + ++++I+ Y+ TY++NFP + GDI I
Sbjct: 4 IRVVSLFSGVGGICLAFKQA----GFDVIWANDIDKYACITYRSNFPTVELVEGDIQSID 59
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ +IP+ D++ AGFPCQPFS AG
Sbjct: 60 SNNIPECDIITAGFPCQPFSIAG 82
>gi|300813374|ref|ZP_07093725.1| Modification methylase HpaII [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300512517|gb|EFK39666.1| Modification methylase HpaII [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 347
Score = 93.5 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKI 59
M K DLF GIGGIRL +Q F + +E F SE + + +TY ANF IFGDI KI
Sbjct: 1 MFKSIDLFAGIGGIRLGFDQAFGND-IETVFVSEWDKKAQETYIANFGEKPKIFGDITKI 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
DIP HD+LLAGFPCQ FS AG
Sbjct: 60 DEIDIPIHDILLAGFPCQAFSLAG 83
>gi|194099739|ref|YP_002002874.1| NgoIM [Neisseria gonorrhoeae NCCP11945]
gi|240013125|ref|ZP_04720038.1| NgoIM [Neisseria gonorrhoeae DGI18]
gi|240015568|ref|ZP_04722108.1| NgoIM [Neisseria gonorrhoeae FA6140]
gi|240114103|ref|ZP_04728593.1| NgoIM [Neisseria gonorrhoeae MS11]
gi|240114658|ref|ZP_04728720.1| NgoIM [Neisseria gonorrhoeae PID18]
gi|240120196|ref|ZP_04733158.1| NgoIM [Neisseria gonorrhoeae PID24-1]
gi|240122493|ref|ZP_04735449.1| NgoIM [Neisseria gonorrhoeae PID332]
gi|240126658|ref|ZP_04739544.1| NgoIM [Neisseria gonorrhoeae SK-92-679]
gi|254492718|ref|ZP_05105889.1| modification methylase NgoBI [Neisseria gonorrhoeae 1291]
gi|260441536|ref|ZP_05795352.1| NgoIM [Neisseria gonorrhoeae DGI2]
gi|268600171|ref|ZP_06134338.1| modification methylase NgoBI [Neisseria gonorrhoeae MS11]
gi|268600304|ref|ZP_06134471.1| modification methylase NgoBI [Neisseria gonorrhoeae PID18]
gi|268602536|ref|ZP_06136703.1| modification methylase NgoBI [Neisseria gonorrhoeae PID1]
gi|268681085|ref|ZP_06147947.1| modification methylase NgoBI [Neisseria gonorrhoeae PID332]
gi|268685237|ref|ZP_06152099.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-92-679]
gi|268685565|ref|ZP_06152427.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-93-1035]
gi|193935029|gb|ACF30853.1| NgoIM [Neisseria gonorrhoeae NCCP11945]
gi|226511758|gb|EEH61103.1| modification methylase NgoBI [Neisseria gonorrhoeae 1291]
gi|268584302|gb|EEZ48978.1| modification methylase NgoBI [Neisseria gonorrhoeae MS11]
gi|268584435|gb|EEZ49111.1| modification methylase NgoBI [Neisseria gonorrhoeae PID18]
gi|268586667|gb|EEZ51343.1| modification methylase NgoBI [Neisseria gonorrhoeae PID1]
gi|268621369|gb|EEZ53769.1| modification methylase NgoBI [Neisseria gonorrhoeae PID332]
gi|268625521|gb|EEZ57921.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-92-679]
gi|268625849|gb|EEZ58249.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-93-1035]
gi|317165226|gb|ADV08767.1| NgoIM [Neisseria gonorrhoeae TCDC-NG08107]
Length = 315
Score = 93.5 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 44/83 (53%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K DLF GIGGIRL E FSSE + Y+ + Y+ANF DI I
Sbjct: 1 MYKTIDLFSGIGGIRLGFE----KYGCTNVFSSEWDKYARQVYEANFGEKPFG-DINGID 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+LLAGFPCQPFS AG
Sbjct: 56 PSDIPDHDILLAGFPCQPFSIAG 78
>gi|59802299|ref|YP_209011.1| NgoIM [Neisseria gonorrhoeae FA 1090]
gi|240081825|ref|ZP_04726368.1| NgoIM [Neisseria gonorrhoeae FA19]
gi|59719194|gb|AAW90599.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA 1090]
Length = 315
Score = 93.5 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 44/83 (53%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K DLF GIGGIRL E FSSE + Y+ + Y+ANF DI I
Sbjct: 1 MYKTIDLFSGIGGIRLGFE----KYGCTNVFSSEWDKYARQVYEANFGEKPFG-DINGID 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+LLAGFPCQPFS AG
Sbjct: 56 PSDIPDHDILLAGFPCQPFSIAG 78
>gi|328948822|ref|YP_004366159.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM
2489]
gi|328449146|gb|AEB14862.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM
2489]
Length = 437
Score = 93.5 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF GIGGIR E + EC F+SEI P++V+ + N PN + GDI KI
Sbjct: 7 IKFIDLFAGIGGIRKGFESACADLGIKTECVFTSEIKPHAVEVLKQNHPNETVRGDITKI 66
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+T +IPD D LL GFPCQ FS AG
Sbjct: 67 ETAEIPDFDFLLGGFPCQAFSAAG 90
>gi|172039424|ref|YP_001805925.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC
51142]
gi|171700878|gb|ACB53859.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC
51142]
Length = 729
Score = 93.5 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK DLF GIGG RL E+ C +S EIN + + Y NF DI KI
Sbjct: 6 LKFIDLFAGIGGFRLAFEKA----GYHCVYSCEINDHCRQVYYDNFGELPDQ-DITKIIP 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++IPD D+L AGFPCQPFS G
Sbjct: 61 KNIPDFDILTAGFPCQPFSICG 82
>gi|313892290|ref|ZP_07825883.1| modification methylase HpaII [Dialister microaerophilus UPII
345-E]
gi|313119428|gb|EFR42627.1| modification methylase HpaII [Dialister microaerophilus UPII
345-E]
Length = 329
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59
M K DLF GIGGIRL EQ F + ++ F SE + + +TY+ANF + + DI I
Sbjct: 1 MYKSIDLFAGIGGIRLGFEQAFKNE-IKTVFVSEWDKKAQETYRANFKDDIEIRGDINTI 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+DIP H++LLAGFPCQ FS AG
Sbjct: 60 DEKDIPKHNILLAGFPCQAFSLAG 83
>gi|269122950|ref|YP_003305527.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
gi|268314276|gb|ACZ00650.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
Length = 328
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI LF G GG+ L ++ + ++E + +TY+ N LI GDI I +
Sbjct: 1 MKIISLFSGAGGLDLGFKKA----GFDIVAANEFDKTIWETYEKNHKTHLIKGDICNIHS 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
P+ D ++ G PCQ +S+AG
Sbjct: 57 SMFPECDGIIGGPPCQSWSEAG 78
>gi|145638078|ref|ZP_01793692.1| putative type II 5-cytosoine methyltransferase [Haemophilus
influenzae PittHH]
gi|145268726|gb|EDK08715.1| putative type II 5-cytosoine methyltransferase [Haemophilus
influenzae PittHH]
Length = 226
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF G GG+ L +Q ++++ + +V+TY+ N + GDI KI +
Sbjct: 6 LTVISLFSGAGGLDLGFKQA----GFNLIWANDFDKDAVETYKENIGKECVLGDITKIPS 61
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
+IP+ DV++ GFPCQ FS A
Sbjct: 62 SEIPNADVMIGGFPCQGFSMA 82
>gi|78777762|ref|YP_394077.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans
DSM 1251]
gi|78498302|gb|ABB44842.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans
DSM 1251]
Length = 328
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/82 (52%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGGIRL EQ F +E F+SEI+ Y+ +TY ANF T DI +I
Sbjct: 20 FRAIDLFAGIGGIRLGFEQAFGE-KIEFVFASEIDKYARETYYANFGETPHG-DITQIDE 77
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++IP D+LLAGFPCQ FS AG
Sbjct: 78 KNIPPFDILLAGFPCQAFSVAG 99
>gi|48243617|gb|AAT40769.1| putative DNA methylase [Haemophilus influenzae]
Length = 293
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF G GG+ L +Q ++++ + +V+TY+ N + GDI KI +
Sbjct: 5 LTVISLFSGAGGLDLGFKQA----GFNLIWANDFDKDAVETYKENIGKECVLGDITKIPS 60
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
+IP+ DV++ GFPCQ FS A
Sbjct: 61 SEIPNADVMIGGFPCQGFSMA 81
>gi|268595734|ref|ZP_06129901.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae 35/02]
gi|291044897|ref|ZP_06570606.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|293397972|ref|ZP_06642178.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|268549123|gb|EEZ44541.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae 35/02]
gi|291011791|gb|EFE03787.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291611918|gb|EFF40987.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
Length = 320
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/83 (53%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K DLF GIGGIRL E FSSE + Y+ + Y+ANF DI I
Sbjct: 6 MYKTIDLFSGIGGIRLGFE----KYGCTNVFSSEWDKYARQVYEANFGEKPFG-DINGID 60
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+LLAGFPCQPFS AG
Sbjct: 61 PSDIPDHDILLAGFPCQPFSIAG 83
>gi|268597921|ref|ZP_06132088.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA19]
gi|268551709|gb|EEZ46728.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA19]
Length = 320
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/83 (53%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K DLF GIGGIRL E FSSE + Y+ + Y+ANF DI I
Sbjct: 6 MYKTIDLFSGIGGIRLGFE----KYGCTNVFSSEWDKYARQVYEANFGEKPFG-DINGID 60
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+LLAGFPCQPFS AG
Sbjct: 61 PSDIPDHDILLAGFPCQPFSIAG 83
>gi|166368844|ref|YP_001661117.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa
NIES-843]
gi|166091217|dbj|BAG05925.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa
NIES-843]
Length = 338
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/83 (51%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+K DLF GIGG R+ E + +C FSSE N +S KTY+ N GDI I
Sbjct: 1 MVKFIDLFAGIGGFRIAFE----NLGCQCVFSSEWNKFSRKTYE-ANFNDSPEGDITLIP 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L AGFPCQPFS AG
Sbjct: 56 ALTIPDHDILTAGFPCQPFSIAG 78
>gi|313678561|ref|YP_004056301.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis PG45]
gi|312950401|gb|ADR24996.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis PG45]
Length = 315
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K+ LF G+GGI L EQT + +++E + ++ TY++NF + DI K+
Sbjct: 1 MYKVGSLFAGVGGIDLGFEQTGK---FKTIWANEFDKNALLTYKSNFSTFVSNVDIRKVN 57
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPD D++L+GFPC FS AG
Sbjct: 58 VNDIPDVDIILSGFPCTSFSIAG 80
>gi|12229862|sp|Q59603|MTB1_NEIGO RecName: Full=Modification methylase NgoBI; Short=M.NgoBI;
AltName: Full=Cytosine-specific methyltransferase
NgoBI; Short=M.NgoI
gi|5924404|gb|AAB03206.2| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae]
Length = 317
Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/83 (53%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K DLF GIGGIRL E FSSE + Y+ + Y+ANF DI I
Sbjct: 1 MYKTIDLFSGIGGIRLGFE----KYGCTNVFSSEWDKYARQVYEANFGEKPFG-DINGID 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+LLAGFPCQPFS AG
Sbjct: 56 PSDIPDHDILLAGFPCQPFSIAG 78
>gi|288559284|ref|YP_003422770.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1]
gi|288541994|gb|ADC45878.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1]
Length = 339
Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGG RL E +C FSS+I+ ++ +TY NF DI++I
Sbjct: 30 FTFIDLFSGIGGFRLAFE----SVGGKCVFSSDIDKWANETYYMNFGEYPHG-DISEIPA 84
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L AGFPCQPFS G
Sbjct: 85 NQIPDHDILCAGFPCQPFSIGG 106
>gi|167746073|ref|ZP_02418200.1| hypothetical protein ANACAC_00768 [Anaerostipes caccae DSM 14662]
gi|167654588|gb|EDR98717.1| hypothetical protein ANACAC_00768 [Anaerostipes caccae DSM 14662]
Length = 312
Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ LFCG GG+ + ++++ + Y+V+TY+ANF + +I GDI +I+
Sbjct: 1 MRVLSLFCGCGGLDKGF----DETGYNIVWANDFDKYAVETYKANFGDNVILGDINEIEL 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+P+ DVL+ GFPCQPFS G
Sbjct: 57 NSLPEFDVLIGGFPCQPFSMMG 78
>gi|218247578|ref|YP_002372949.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|218168056|gb|ACK66793.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
Length = 727
Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL EQ +C +S EIN Y K Y NF D+ KI
Sbjct: 6 FKFIDLFAGIGGFRLAFEQAQ----YQCVYSCEINEYCQKVYYNNFDECPDN-DVTKINP 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+P+ DVL AGFPCQPFS G
Sbjct: 61 HTLPNFDVLTAGFPCQPFSICG 82
>gi|323650698|gb|ADX97433.1| M1.BspACI [Bacillus psychrodurans]
Length = 320
Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/82 (52%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG R+ LE +C FSS+I+ Y+ +TY+ NF DI KIK+
Sbjct: 4 FKFIDLFSGIGGFRIALE----ENGGQCVFSSDIDKYARETYKENFGEEPSG-DITKIKS 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++IPDHD+L AGFPCQPFS AG
Sbjct: 59 EEIPDHDILCAGFPCQPFSIAG 80
>gi|189423370|ref|YP_001950547.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ]
gi|189419629|gb|ACD94027.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ]
Length = 415
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/84 (53%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59
M DLF GIGGIRL + C F+SE N +S KTY NF N DI
Sbjct: 67 MFTFIDLFAGIGGIRLGFQSA----GGRCVFTSEWNDWSQKTYVENFGNEHAIVGDIVPY 122
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+DIPDHDVLLAGFPCQPFS AG
Sbjct: 123 PAEDIPDHDVLLAGFPCQPFSIAG 146
>gi|119510471|ref|ZP_01629604.1| DNA cytosine methylase [Nodularia spumigena CCY9414]
gi|119464893|gb|EAW45797.1| DNA cytosine methylase [Nodularia spumigena CCY9414]
Length = 727
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK DLF GIGG RL E+ + EC FS EI+ + + N DI KI
Sbjct: 6 LKFGDLFAGIGGFRLAFEKA----DYECVFSCEIDQ-ACQQVYLNNFGDKPECDIRKIDL 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ +P DVL AGFPCQPFS G
Sbjct: 61 EKLPYFDVLTAGFPCQPFSICG 82
>gi|255279955|ref|ZP_05344510.1| modification methylase EcoRII [Bryantella formatexigens DSM
14469]
gi|255269728|gb|EET62933.1| modification methylase EcoRII [Bryantella formatexigens DSM
14469]
Length = 311
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GIGG+ + ++++ + Y+V+TY+ANF ++ GDI +I
Sbjct: 1 MKVVSLFSGIGGLDRGF----LDTGYDVIWANDFDKYAVQTYKANFGEHIVLGDINEIPL 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+IPD DVL+ GFPCQPFS G
Sbjct: 57 DEIPDCDVLIGGFPCQPFSMMG 78
>gi|307570754|emb|CAR83933.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes L99]
gi|307572166|emb|CAR85345.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes L99]
Length = 426
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
+K DLF GIGG RL +E+ EC EI+ ++ K+YQ + DI K+
Sbjct: 1 MKFLDLFAGIGGFRLGMERA----GHECVGYVEIDKFARKSYQAIHDTEGEWTREDITKV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
++ D++ GFPCQ FS AG
Sbjct: 57 TDEEWRTLRGTVDIICGGFPCQSFSIAG 84
>gi|254429380|ref|ZP_05043087.1| DNA-cytosine methyltransferase superfamily [Alcanivorax sp. DG881]
gi|196195549|gb|EDX90508.1| DNA-cytosine methyltransferase superfamily [Alcanivorax sp. DG881]
Length = 435
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
K DLF GIGG+R+ E +C F+SE + Y+ +TY NF ++ GDI ++
Sbjct: 86 FKFVDLFAGIGGLRMAFESA----GGQCVFTSEWDSYAQRTYLGNFGDSHQLNGDITEVN 141
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPDHDVLLAGFPCQPFS AG
Sbjct: 142 AADIPDHDVLLAGFPCQPFSIAG 164
>gi|311064356|ref|YP_003971081.1| cytosine methyl transferase Dcm [Bifidobacterium bifidum PRL2010]
gi|310866675|gb|ADP36044.1| Dcm Cytosine methyl transferase [Bifidobacterium bifidum PRL2010]
Length = 326
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ LF G GG+ L + + ++++ + +V+TY+AN + + DI+++
Sbjct: 14 RVVSLFSGAGGLDLGFKLA----GFQLAWANDFDKDAVETYRANIDDHCVCADISEVSDH 69
Query: 63 DIPDHDVLLAGFPCQPFSQA 82
DIPD D+++ GFPCQ FS A
Sbjct: 70 DIPDCDIMIGGFPCQGFSMA 89
>gi|323486195|ref|ZP_08091524.1| cytosine-specific methyltransferase [Clostridium symbiosum
WAL-14163]
gi|323400521|gb|EGA92890.1| cytosine-specific methyltransferase [Clostridium symbiosum
WAL-14163]
Length = 382
Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGG+R+ E+ +C +SSE N YS +TY ANF DI +++
Sbjct: 55 FRFIDLFAGIGGMRIAYERA----GGKCVYSSEWNKYSQQTYFANFGEQPEG-DITQVEA 109
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIPDHD+L+AGFPCQPFS AG
Sbjct: 110 EDIPDHDILVAGFPCQPFSIAG 131
>gi|224543136|ref|ZP_03683675.1| hypothetical protein CATMIT_02336 [Catenibacterium mitsuokai DSM
15897]
gi|224523923|gb|EEF93028.1| hypothetical protein CATMIT_02336 [Catenibacterium mitsuokai DSM
15897]
Length = 430
Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF GIGGIR E + R V EC F+SEI PY++K + N PN I GDI ++
Sbjct: 5 IKFVDLFAGIGGIRKGFELACSDRGVKTECVFTSEIKPYAIKVLKQNHPNETITGDITQV 64
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
IPD D LL GFPCQ FS AG
Sbjct: 65 DATKIPDFDFLLGGFPCQAFSAAG 88
>gi|315498495|ref|YP_004087299.1| transcriptional regulator, xre family [Asticcacaulis excentricus CB
48]
gi|315416507|gb|ADU13148.1| transcriptional regulator, XRE family [Asticcacaulis excentricus CB
48]
Length = 410
Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/83 (51%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60
DLF GIGG+R + C F+SE N Y+ +TY ANF + DI +I+
Sbjct: 66 FTFIDLFAGIGGLRRGF----DEIGGHCVFTSEWNKYAQQTYAANFRDNHPIHGDITQIE 121
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
T DIPDHDVLLAGFPCQPFS AG
Sbjct: 122 TADIPDHDVLLAGFPCQPFSIAG 144
>gi|254410261|ref|ZP_05024041.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
gi|196183297|gb|EDX78281.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
Length = 384
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K DLF GIGG R+ EQT +C +S EI+P + Y NF + DI +I
Sbjct: 4 IKFIDLFAGIGGFRIAFEQT----GYKCVYSCEIDPKCQEVYFNNFLDKPAG-DIREIDI 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPD DVL AGFPCQPFS G
Sbjct: 59 NSIPDFDVLTAGFPCQPFSICG 80
>gi|323650700|gb|ADX97434.1| M2.BspACI [Bacillus psychrodurans]
Length = 444
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LKI LF GIGG LE++ + + + FSSEI+ ++ +Y+ANFPN + GDI KI
Sbjct: 86 LKIVSLFSGIGGFEAGLEES--NVSGKIVFSSEIDRFAKISYEANFPNHNLHGDITKIDA 143
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+D+P+HD+L+ GFPCQ FS AG
Sbjct: 144 KDVPNHDLLIGGFPCQAFSIAG 165
>gi|15616070|ref|NP_244375.1| cytosine-specific methyltransferase [Bacillus halodurans C-125]
gi|10176132|dbj|BAB07227.1| cytosine-specific methyltransferase [Bacillus halodurans C-125]
Length = 326
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LF G GG+ + E + ++++I+ + T++ ++ GDI+KI
Sbjct: 6 FTAVSLFSGAGGLDMGFE----RIGFKIIWANDIDEDACATHRLWSDAEVVQGDISKIDV 61
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP D+LL G+PCQ FS AG
Sbjct: 62 STIPSADILLGGWPCQGFSLAG 83
>gi|462651|sp|P34906|MTF1_FUSNU RecName: Full=Modification methylase FnuDI; Short=M.FnuDI;
AltName: Full=Cytosine-specific methyltransferase FnuDI
gi|2961231|gb|AAC05695.1| FnuDI DNA modification methyltransferase [Fusobacterium
nucleatum]
Length = 344
Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF G GG+ L E+ E ++E + +TY+ N LI DI +I +
Sbjct: 1 MKLLSLFSGAGGLDLGFERA----GFEIIVANEYDKTIWETYEKNHKAKLIKKDIREILS 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+++P D ++ G PCQ +S+AG
Sbjct: 57 EELPKSDGIIGGPPCQSWSEAG 78
>gi|315653956|ref|ZP_07906872.1| modification methylase EcoRII [Lactobacillus iners ATCC 55195]
gi|315488652|gb|EFU78298.1| modification methylase EcoRII [Lactobacillus iners ATCC 55195]
Length = 336
Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL LE +C +S+E + ++ +TY NF +T DI ++
Sbjct: 12 YKFIDLFAGIGGFRLALE----SFGAKCVYSNEWDKFAQETYHMNFGDTPEG-DITQVDE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L AGFPCQPFS +G
Sbjct: 67 TRIPDHDILCAGFPCQPFSISG 88
>gi|309804726|ref|ZP_07698791.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
09V1-c]
gi|312871535|ref|ZP_07731628.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
3008A-a]
gi|325913106|ref|ZP_08175476.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII
60-B]
gi|308166118|gb|EFO68336.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
09V1-c]
gi|311092930|gb|EFQ51281.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
3008A-a]
gi|325477527|gb|EGC80669.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII
60-B]
Length = 336
Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL LE +C +S+E + ++ +TY NF +T DI ++
Sbjct: 12 YKFIDLFAGIGGFRLALE----SFGAKCVYSNEWDKFAQETYHMNFGDTPEG-DITQVDE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L AGFPCQPFS +G
Sbjct: 67 TRIPDHDILCAGFPCQPFSISG 88
>gi|329920363|ref|ZP_08277095.1| modification methylase HhaI [Lactobacillus iners SPIN 1401G]
gi|328936039|gb|EGG32492.1| modification methylase HhaI [Lactobacillus iners SPIN 1401G]
Length = 336
Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL LE +C +S+E + ++ +TY NF +T DI ++
Sbjct: 12 YKFIDLFAGIGGFRLALE----SFGAKCVYSNEWDKFAQETYHMNFGDTPEG-DITQVDE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L AGFPCQPFS +G
Sbjct: 67 TSIPDHDILCAGFPCQPFSISG 88
>gi|312872570|ref|ZP_07732638.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2062A-h1]
gi|311091932|gb|EFQ50308.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2062A-h1]
Length = 336
Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL LE +C +S+E + ++ +TY NF +T DI ++
Sbjct: 12 YKFIDLFAGIGGFRLALE----SFGAKCVYSNEWDKFAQETYHMNFGDTPEG-DITQVDE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L AGFPCQPFS +G
Sbjct: 67 TSIPDHDILCAGFPCQPFSISG 88
>gi|312874304|ref|ZP_07734336.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2052A-d]
gi|311090177|gb|EFQ48589.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2052A-d]
Length = 336
Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL LE +C +S+E + ++ +TY NF +T DI ++
Sbjct: 12 YKFIDLFAGIGGFRLALE----SFGAKCVYSNEWDKFAQETYHMNFGDTPEG-DITQVDE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L AGFPCQPFS +G
Sbjct: 67 TRIPDHDILCAGFPCQPFSISG 88
>gi|332665024|ref|YP_004447812.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332333838|gb|AEE50939.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
Length = 366
Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ LF G GG+ + + + ++++ + + +Y N N + GDI
Sbjct: 1 MRVVSLFSGAGGLDIGFRKA----GFDIVWANDFDKNACASYSKNIGNHIRCGDINHYLD 56
Query: 62 Q--DIPDHDVLLAGFPCQPFSQAG 83
+ DI + D+++ G PCQ FS AG
Sbjct: 57 EISDIKNVDLVMGGPPCQGFSVAG 80
>gi|148244085|ref|YP_001220322.1| DNA-cytosine methyltransferase [Acidiphilium cryptum JF-5]
gi|146400648|gb|ABQ29180.1| DNA-cytosine methyltransferase [Acidiphilium cryptum JF-5]
Length = 487
Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59
DLF GIGG+R E C F+SE + YS TY AN+P DI KI
Sbjct: 132 FTFIDLFAGIGGLRRGFE----AIGGRCVFTSEWDKYSQATYAANYPYDDHTISGDITKI 187
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+DIP+HDVLLAGFPCQPFS AG
Sbjct: 188 GEKDIPEHDVLLAGFPCQPFSIAG 211
>gi|119355933|ref|YP_910577.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM
266]
gi|119353282|gb|ABL64153.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM
266]
Length = 425
Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/83 (50%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60
DLF GIGG+R E C F+SE + YS +TY ANF G DI KI
Sbjct: 67 FTFIDLFAGIGGMRKAFE----ELGGRCVFTSEWDKYSRQTYCANFDCDHEIGGDITKID 122
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+DIP HD+L+AGFPCQPFS AG
Sbjct: 123 ARDIPSHDILVAGFPCQPFSIAG 145
>gi|312874943|ref|ZP_07734962.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2053A-b]
gi|311089688|gb|EFQ48113.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2053A-b]
Length = 336
Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL LE +C +S+E + ++ +TY NF +T DI ++
Sbjct: 12 YKFIDLFAGIGGFRLALE----SFGAKCVYSNEWDKFAQETYHMNFGDTPEG-DITQVDE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L AGFPCQPFS +G
Sbjct: 67 TRIPDHDILCAGFPCQPFSISG 88
>gi|126698504|ref|YP_001087401.1| putative DNA methylase [Clostridium difficile 630]
gi|115249941|emb|CAJ67761.1| putative phage DNA modification methylase [Clostridium difficile]
Length = 357
Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIA 57
ML DLF GIGG RL +E+ +C E + ++ +Y A DI
Sbjct: 1 MLTFLDLFAGIGGFRLGMEKA----GHKCLGHCEYDKFANLSYNAMHKPKEDEWFERDIR 56
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
+I+T++IP DV GFPCQ S AG
Sbjct: 57 EIRTENIPRADVWCFGFPCQDISVAG 82
>gi|309809622|ref|ZP_07703479.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners SPIN
2503V10-D]
gi|308170103|gb|EFO72139.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners SPIN
2503V10-D]
Length = 336
Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL LE +C +S+E + ++ +TY NF +T DI ++
Sbjct: 12 YKFIDLFAGIGGFRLALE----SFGAKCVYSNEWDKFAQETYHMNFGDTPEG-DITQVDE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L AGFPCQPFS +G
Sbjct: 67 TRIPDHDILCAGFPCQPFSISG 88
>gi|312898460|ref|ZP_07757850.1| DNA (cytosine-5-)-methyltransferase [Megasphaera micronuciformis
F0359]
gi|310620379|gb|EFQ03949.1| DNA (cytosine-5-)-methyltransferase [Megasphaera micronuciformis
F0359]
Length = 400
Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGG+RL EQ H C +S+E N YS +TY ANF DI K+
Sbjct: 53 FTFIDLFAGIGGMRLAYEQAGGH----CVYSNEWNKYSQQTYFANFGEQPDG-DITKVDE 107
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L+AGFPCQPFS AG
Sbjct: 108 NSIPDHDILVAGFPCQPFSIAG 129
>gi|315222617|ref|ZP_07864506.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus
F0211]
gi|315188303|gb|EFU22029.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus
F0211]
Length = 348
Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF G GG+ L E+ ++E + +TY+ N LI GDI I +
Sbjct: 9 MNLISLFSGAGGLDLGFEKA----GFNVVAANEYDKTIWETYEKNHDTKLIKGDICGIPS 64
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ P D ++ G PCQ +S+AG
Sbjct: 65 EMFPKCDGIIGGPPCQSWSEAG 86
>gi|159027646|emb|CAO89510.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 728
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ DLF GIGG RL E +C +S EI+ K Y NF DI KI
Sbjct: 6 LRFIDLFAGIGGFRLAFE----SVGYDCVYSCEIDENCRKVYFNNFQEIPDQ-DIRKIAI 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+PD +VL AGFPCQPFS +G
Sbjct: 61 HDLPDFEVLTAGFPCQPFSISG 82
>gi|312874669|ref|ZP_07734692.1| modification methylase HaeIII [Lactobacillus iners LEAF 2053A-b]
gi|311089796|gb|EFQ48217.1| modification methylase HaeIII [Lactobacillus iners LEAF 2053A-b]
Length = 331
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF G GG+ L ++ E ++E + KTY+ N LI GDI KI +
Sbjct: 1 MKLISLFSGAGGLDLGFKKA----GYEIVAANEFDKTIWKTYEKNHATRLIKGDICKIPS 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ P+ D ++ G PCQ +S+AG
Sbjct: 57 DEFPECDGIIGGPPCQSWSEAG 78
>gi|257081612|ref|ZP_05575973.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis E1Sol]
gi|256989642|gb|EEU76944.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis E1Sol]
Length = 398
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+K DLF GIGG RL +E EC EI+ ++ +Y+A I
Sbjct: 1 MKFLDLFAGIGGFRLGMESA----GHECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I DV+ GFPCQ FS AG
Sbjct: 57 SDEFIRRIGSVDVICGGFPCQAFSIAG 83
>gi|296126560|ref|YP_003633812.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563]
gi|296018376|gb|ADG71613.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563]
Length = 311
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M + DLF G+GG L + C F+SEI+ + +TY+ NFP+T++ GDI +I
Sbjct: 1 MYRFIDLFAGVGGFHLAF------NSENCVFASEIDINARETYKLNFPDTVLEGDITEID 54
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
++IP+HD+L AGFPCQPFS AG
Sbjct: 55 EKNIPEHDILCAGFPCQPFSVAG 77
>gi|295110826|emb|CBL24779.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162]
Length = 312
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF G GG+ L + + +++++ +V+TY+ N + +I DI+KIK
Sbjct: 1 MKVVSLFSGAGGLDLGFKMA----GHDIIWANDMYADAVETYKKNIGDHIICEDISKIKA 56
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
+DIPD D+++ GFPCQ FS A
Sbjct: 57 EDIPDCDIIIGGFPCQGFSVA 77
>gi|227485931|ref|ZP_03916247.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus
ATCC 51172]
gi|227235976|gb|EEI85991.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus
ATCC 51172]
Length = 318
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K DLFCGIGG R+ E + +C FSS+I+ Y+ +TY NF I +
Sbjct: 1 MYKFIDLFCGIGGFRIAFE----NLGCKCVFSSDIDVYARETYNDNFGEYPAGDIIK-VD 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ IP+HD+L AGFPCQPFS AG
Sbjct: 56 AETIPNHDILCAGFPCQPFSIAG 78
>gi|290891561|ref|ZP_06554618.1| hypothetical protein AWRIB429_2008 [Oenococcus oeni AWRIB429]
gi|290478814|gb|EFD87481.1| hypothetical protein AWRIB429_2008 [Oenococcus oeni AWRIB429]
Length = 382
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL LEQ EC EI+ ++ ++Y N + DI +
Sbjct: 1 MKFLDLFAGIGGFRLGLEQA----GHECVGFCEIDKFARQSYKAIHNTEGEREYHDITTV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
++ +++ GFPCQ FS AG
Sbjct: 57 SNEEWRTLRGTVELICGGFPCQAFSIAG 84
>gi|319776347|ref|YP_004138835.1| Cytosine-specific methyltransferase [Haemophilus influenzae
F3047]
gi|329123500|ref|ZP_08252064.1| modification methylase HaeII [Haemophilus aegyptius ATCC 11116]
gi|317450938|emb|CBY87164.1| Cytosine-specific methyltransferase [Haemophilus influenzae
F3047]
gi|327471082|gb|EGF16537.1| modification methylase HaeII [Haemophilus aegyptius ATCC 11116]
Length = 318
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGGIRL E + FSSE + Y+ Y+ NF DI I
Sbjct: 4 YKTIDLFAGIGGIRLGFE----AFGCKNVFSSEWDKYAQSMYEVNFGEKPFG-DINDISP 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+LLAGFPCQPFS AG
Sbjct: 59 SDIPDHDILLAGFPCQPFSIAG 80
>gi|259500984|ref|ZP_05743886.1| modification methylase EcoRII [Lactobacillus iners DSM 13335]
gi|302190566|ref|ZP_07266820.1| DNA-cytosine methyltransferase [Lactobacillus iners AB-1]
gi|259167678|gb|EEW52173.1| modification methylase EcoRII [Lactobacillus iners DSM 13335]
Length = 336
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL LE +C +S+E + ++ +TYQ NF +T DI ++
Sbjct: 12 YKFIDLFAGIGGFRLALE----SFGAKCVYSNEWDKFAQETYQMNFGDTPEG-DITQVDE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L AGFPCQPFS +G
Sbjct: 67 TSIPDHDILCAGFPCQPFSISG 88
>gi|118576810|ref|YP_876553.1| C-5 cytosine-specific DNA methylase [Cenarchaeum symbiosum A]
gi|118195331|gb|ABK78249.1| C-5 cytosine-specific DNA methylase [Cenarchaeum symbiosum A]
Length = 325
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ DLFCGIGG+R+ LE+ C +S EIN + KTY+ANF DI ++
Sbjct: 5 IRFIDLFCGIGGMRIGLERA----GGRCVYSCEINEPARKTYEANFEPVTDK-DITEVDA 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP+HDVL AGFPCQPFS AG
Sbjct: 60 GSIPNHDVLAAGFPCQPFSLAG 81
>gi|308229518|gb|ADO24171.1| M.AciI [Arthrobacter citreus]
Length = 703
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K+ LF GIGG L L+ + FSSEI+ ++ ++Y ANFPN + GDI KI
Sbjct: 22 YKVVSLFSGIGGFELGLKYSSLSS--HVIFSSEIDKFAQQSYLANFPNHNLVGDITKIDE 79
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
Q+IPDHD+L+ GFPCQ FS AG
Sbjct: 80 QEIPDHDILMGGFPCQAFSIAG 101
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGG RL LE C FSS+I+ Y+ +TY NF DI KI +
Sbjct: 385 FSFIDLFSGIGGFRLALE----KNGGTCLFSSDIDKYARETYFNNFGEMPSG-DITKIAS 439
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++IP HD+L AGFPCQPFS AG
Sbjct: 440 ENIPFHDILCAGFPCQPFSIAG 461
>gi|224418923|ref|ZP_03656929.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT
98-5491]
gi|253827874|ref|ZP_04870759.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT
98-5491]
gi|313142438|ref|ZP_07804631.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT
98-5491]
gi|253511280|gb|EES89939.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT
98-5491]
gi|313131469|gb|EFR49086.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT
98-5491]
Length = 328
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGGIR E C FSSEI+ ++ +TY+AN+ DI KI+
Sbjct: 23 YTFIDLFAGIGGIRRGFEI----EGGTCVFSSEIDKFACQTYEANWGEKPSG-DITKIEA 77
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIP D+LL GFPCQ FS AG
Sbjct: 78 CDIPKFDILLGGFPCQAFSIAG 99
>gi|294788070|ref|ZP_06753314.1| modification methylase EcoRII [Simonsiella muelleri ATCC 29453]
gi|294484363|gb|EFG32046.1| modification methylase EcoRII [Simonsiella muelleri ATCC 29453]
Length = 355
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK DLF G+GGIR +Q F R +E FSSEI+ ++ +TY + + +GDI +I+
Sbjct: 41 LKAIDLFAGVGGIRTGFQQAFGER-IEFVFSSEIDKFARQTYA-ANYHEIPYGDITQIQA 98
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++P HD++LAGFPCQ FS AG
Sbjct: 99 HEVPTHDIILAGFPCQAFSVAG 120
>gi|1171044|sp|P43420|MTB6_BACSF RecName: Full=Modification methylase Bsp6I; Short=M.Bsp6I;
AltName: Full=Cytosine-specific methyltransferase Bsp6I
gi|547481|emb|CAA57293.1| site-specific DNA-methyltransferase (cytosine-specific) [Bacillus
sp.]
gi|1098125|prf||2115268B methyltransferase Bsp6IM
Length = 315
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML+I LF G+GGI L EQT E +++E + + TYQ+NF N LI DI IK
Sbjct: 1 MLQIASLFAGVGGIDLGFEQTGY---FETVWANEYDKNAAITYQSNFKNKLIIDDIRNIK 57
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+D+PD DVLL+GFPC FS AG
Sbjct: 58 VEDVPDFDVLLSGFPCTSFSVAG 80
>gi|68250112|ref|YP_249224.1| modification methylase HaeII [Haemophilus influenzae 86-028NP]
gi|68058311|gb|AAX88564.1| modification methylase HaeII [Haemophilus influenzae 86-028NP]
Length = 318
Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGGIRL E + FSSE + Y+ Y+ NF DI I
Sbjct: 4 YKTIDLFAGIGGIRLGFE----AFGCKNVFSSEWDKYAQSMYEVNFGEKPFG-DINDISP 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+LLAGFPCQPFS AG
Sbjct: 59 SDIPDHDILLAGFPCQPFSIAG 80
>gi|12229852|sp|O30868|MTH2_HAEAE RecName: Full=Modification methylase HaeII; Short=M.HaeII;
AltName: Full=Cytosine-specific methyltransferase HaeII
gi|2425087|gb|AAB70829.1| HaeII methylase [Haemophilus aegyptius ATCC 11116]
Length = 318
Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGGIRL E + FSSE + Y+ Y+ NF DI I
Sbjct: 4 YKTIDLFAGIGGIRLGFE----AFGCKNVFSSEWDKYAQSMYEVNFGEKPFG-DINDISP 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+LLAGFPCQPFS AG
Sbjct: 59 SDIPDHDILLAGFPCQPFSIAG 80
>gi|254780516|ref|YP_003064929.1| type II modification methyltransferase [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040193|gb|ACT56989.1| type II modification methyltransferase [Candidatus Liberibacter
asiaticus str. psy62]
Length = 83
Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 83/83 (100%), Positives = 83/83 (100%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK
Sbjct: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
TQDIPDHDVLLAGFPCQPFSQAG
Sbjct: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
>gi|255066464|ref|ZP_05318319.1| modification methylase EcoRII [Neisseria sicca ATCC 29256]
gi|298369378|ref|ZP_06980696.1| modification methylase EcoRII [Neisseria sp. oral taxon 014 str.
F0314]
gi|255049344|gb|EET44808.1| modification methylase EcoRII [Neisseria sicca ATCC 29256]
gi|298283381|gb|EFI24868.1| modification methylase EcoRII [Neisseria sp. oral taxon 014 str.
F0314]
Length = 357
Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGGIRL E +C FSSEI+ ++ KT F + GDI +I
Sbjct: 50 FRFIDLFAGIGGIRLPFE----ELGGQCVFSSEIDKFA-KTTYQAFYGDVPHGDITQIAP 104
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+IPD D+LLAGFPCQPFSQAG
Sbjct: 105 SEIPDFDLLLAGFPCQPFSQAG 126
>gi|160947479|ref|ZP_02094646.1| hypothetical protein PEPMIC_01413 [Parvimonas micra ATCC 33270]
gi|158446613|gb|EDP23608.1| hypothetical protein PEPMIC_01413 [Parvimonas micra ATCC 33270]
Length = 348
Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF G GG+ L E+ ++E + +TY+ N LI GDI I +
Sbjct: 9 MNLVSLFSGAGGLDLGFERA----GFNIVVANEYDKTIWETYEKNHKTKLIKGDICGIPS 64
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
P D ++ G PCQ +S+AG
Sbjct: 65 DMFPKCDGIIGGPPCQSWSEAG 86
>gi|309803758|ref|ZP_07697844.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
11V1-d]
gi|308164167|gb|EFO66428.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
11V1-d]
Length = 336
Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL LE +C +S+E + ++ +TY NF +T DI ++
Sbjct: 12 YKFIDLFAGIGGFRLALE----SFGAQCVYSNEWDKFAQETYHMNFGDTPEG-DITQVDE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L AGFPCQPFS +G
Sbjct: 67 TSIPDHDILCAGFPCQPFSISG 88
>gi|294661528|ref|YP_003579981.1| hypothetical protein KP-KP15_gp115 [Klebsiella phage KP15]
gi|292660689|gb|ADE34937.1| hypothetical protein [Klebsiella phage KP15]
Length = 308
Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI DL G+GG+RL ++ F VEC +SEI+ ++ +TY N+ + I GDI I
Sbjct: 1 MKIIDLCAGVGGVRLGFDKAFG--GVECLLTSEIDKHAQQTYADNWGDENIQGDIFTIDE 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+PDHD+LLAGFPCQ FS+AG
Sbjct: 59 NDVPDHDILLAGFPCQAFSKAG 80
>gi|148826843|ref|YP_001291596.1| modification methylase HaeII [Haemophilus influenzae PittGG]
gi|148718085|gb|ABQ99212.1| modification methylase HaeII [Haemophilus influenzae PittGG]
Length = 318
Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGGIRL E + FSSE + Y+ Y+ NF DI I
Sbjct: 4 YKTIDLFAGIGGIRLGFE----AFGCKNVFSSEWDKYAQSMYEVNFGEKPFG-DINDISP 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+LLAGFPCQPFS AG
Sbjct: 59 SDIPDHDILLAGFPCQPFSIAG 80
>gi|149926993|ref|ZP_01915251.1| C-5 cytosine-specific DNA methylase [Limnobacter sp. MED105]
gi|149824214|gb|EDM83434.1| C-5 cytosine-specific DNA methylase [Limnobacter sp. MED105]
Length = 435
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59
DLF G+GGIR E ++ +C F+SE + Y+ KTY+ N+ DI K+
Sbjct: 85 FTFIDLFAGVGGIRRAFE----NQGGKCVFTSEWDSYAQKTYRENYQRDHHEISGDITKV 140
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
T DIP+HDVLLAGFPCQPFS AG
Sbjct: 141 NTVDIPNHDVLLAGFPCQPFSIAG 164
>gi|317181696|dbj|BAJ59480.1| DNA-cytosine methyltransferase [Helicobacter pylori F57]
Length = 309
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GIGG E F E +++E++ + TY+ANF + L+ DI +
Sbjct: 1 MKVGSLFAGIGGF----ECAFLQAGFEIGWANELDKDACNTYRANFKHKLLEQDIKDLNP 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++ D ++ AGFPCQ FS AG
Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78
>gi|317008995|gb|ADU79575.1| DNA-cytosine methyltransferase [Helicobacter pylori India7]
Length = 309
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GIGG E F E +++E++ + TY+ANF + L+ DI +
Sbjct: 1 MKVGSLFAGIGGF----ECAFLQAGFEIGWANELDKDACNTYRANFKHKLLEQDIKDLNP 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++ D ++ AGFPCQ FS AG
Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78
>gi|308061704|gb|ADO03592.1| DNA-cytosine methyltransferase [Helicobacter pylori Cuz20]
gi|308063214|gb|ADO05101.1| DNA-cytosine methyltransferase [Helicobacter pylori Sat464]
gi|317180749|dbj|BAJ58535.1| DNA-cytosine methyltransferase [Helicobacter pylori F32]
Length = 309
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GIGG E F E +++E++ + TY+ANF + L+ DI +
Sbjct: 1 MKVGSLFAGIGGF----ECAFLQAGFEIGWANELDKDACNTYRANFKHKLLEQDIKDLNP 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++ D ++ AGFPCQ FS AG
Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78
>gi|261839203|gb|ACX98968.1| DNA-cytosine methyltransferase [Helicobacter pylori 52]
Length = 309
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GIGG E F E +++E++ + TY+ANF + L+ DI +
Sbjct: 1 MKVGSLFAGIGGF----ECAFLQAGFEIGWANELDKDACNTYRANFKHKLLEQDIKDLNP 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++ D ++ AGFPCQ FS AG
Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78
>gi|149184876|ref|ZP_01863193.1| hypothetical protein ED21_17522 [Erythrobacter sp. SD-21]
gi|148830987|gb|EDL49421.1| hypothetical protein ED21_17522 [Erythrobacter sp. SD-21]
Length = 410
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV-KTYQANFPNTLIFGDIAKIK 60
DLF GIGG+R + F+ C F+SE + Y+ + N I GDI K+
Sbjct: 64 FTFIDLFAGIGGLR----RAFDGIGGRCVFTSEWDKYAQLTYHTNYPDNRPIAGDITKVP 119
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+IP HDVLLAGFPCQPFS AG
Sbjct: 120 VDEIPVHDVLLAGFPCQPFSIAG 142
>gi|309807025|ref|ZP_07701007.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
03V1-b]
gi|308166645|gb|EFO68842.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
03V1-b]
Length = 336
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL LE +C +S+E + ++ +TYQ NF +T DI ++
Sbjct: 12 YKFIDLFAGIGGFRLALE----SFGAKCVYSNEWDKFAQETYQMNFGDTPGG-DITQVDE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L AGFPCQPFS +G
Sbjct: 67 TSIPDHDILCAGFPCQPFSISG 88
>gi|329768652|ref|ZP_08260136.1| hypothetical protein HMPREF0428_01833 [Gemella haemolysans M341]
gi|328836366|gb|EGF86031.1| hypothetical protein HMPREF0428_01833 [Gemella haemolysans M341]
Length = 427
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
+ DLF GIGG RL +E+ +C EI+ ++ N N + + DI ++
Sbjct: 1 MNFLDLFAGIGGFRLGMERA----GHKCVGFCEIDKFARSSYKVMHNTENEIEYHDIKEV 56
Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83
++ DV+ GFPCQ FS AG
Sbjct: 57 TNEEFRKLRAKVDVICGGFPCQAFSIAG 84
>gi|307290179|ref|ZP_07570098.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX0411]
gi|306498807|gb|EFM68305.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX0411]
Length = 416
Score = 90.4 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+K DLF GIGG RL +E EC EI+ ++ +Y+A I
Sbjct: 1 MKFLDLFAGIGGFRLGMESA----GHECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I DV+ GFPCQ FS AG
Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83
>gi|254251049|ref|ZP_04944367.1| Site-specific DNA methylase [Burkholderia dolosa AUO158]
gi|124893658|gb|EAY67538.1| Site-specific DNA methylase [Burkholderia dolosa AUO158]
Length = 530
Score = 90.4 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/83 (49%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60
DLF GIGGIR+ E C F+SE + Y+ KTY NFP+ + DI +
Sbjct: 172 FTFIDLFAGIGGIRMAFE----LNGGRCVFTSEWDSYAQKTYHVNFPDGMPIHGDITDVD 227
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
IP HDVLLAGFPCQPFS AG
Sbjct: 228 ETSIPSHDVLLAGFPCQPFSIAG 250
>gi|320108256|ref|YP_004183846.1| DNA-cytosine methyltransferase [Terriglobus saanensis SP1PR4]
gi|319926777|gb|ADV83852.1| DNA-cytosine methyltransferase [Terriglobus saanensis SP1PR4]
Length = 347
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ LF GIGGI L E+ + EINPY + NFP+ + DI +
Sbjct: 4 FTVGSLFAGIGGIDLGFERA----GFRTVWQVEINPYCQRVLAKNFPHAERYADIRECGA 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++ DV++ GFPCQ S AG
Sbjct: 60 HNLKPVDVIVGGFPCQDISNAG 81
>gi|255972594|ref|ZP_05423180.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T1]
gi|256762698|ref|ZP_05503278.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T3]
gi|257422413|ref|ZP_05599403.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis X98]
gi|255963612|gb|EET96088.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T1]
gi|256683949|gb|EEU23644.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T3]
gi|257164237|gb|EEU94197.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis X98]
Length = 351
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+K DLF GIGG RL +E EC EI+ ++ +Y+A I
Sbjct: 1 MKFLDLFAGIGGFRLGMESA----GHECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I DV+ GFPCQ FS AG
Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83
>gi|167751356|ref|ZP_02423483.1| hypothetical protein EUBSIR_02342 [Eubacterium siraeum DSM 15702]
gi|167655602|gb|EDR99731.1| hypothetical protein EUBSIR_02342 [Eubacterium siraeum DSM 15702]
Length = 475
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59
+ + DLF GIGGIRL E+ F ++ +E F SE + Y+ KTY+ANF + DI KI
Sbjct: 140 VFRSIDLFAGIGGIRLGFERAFKNQ-IETVFVSEWDEYAQKTYRANFEDDFEIAGDITKI 198
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D+P+ D+ LAGFPCQ FS AG
Sbjct: 199 DESDVPEFDICLAGFPCQAFSLAG 222
>gi|172036128|ref|YP_001802629.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142]
gi|171697582|gb|ACB50563.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142]
Length = 349
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
++K DLF GIGG+RL + F +C FSSE + Y+ KTY+ FGDI +I
Sbjct: 38 IIKFVDLFAGIGGMRLGFSRPFT----QCVFSSEWDKYAQKTYE-ANFQEKPFGDINEIH 92
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
QDIPDHD+L+ GFPCQPFS G
Sbjct: 93 LQDIPDHDILIGGFPCQPFSTIG 115
>gi|238801891|ref|YP_002925094.1| putative DNA methylase [Streptococcus phage 5093]
gi|238558577|gb|ACR45907.1| putative DNA methylase [Streptococcus phage 5093]
Length = 319
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56
+K DLF GIGG RL +E EC EI+ ++ +Y+A +
Sbjct: 1 MKFIDLFAGIGGFRLGMESA----GHECVGFCEIDKFARASYKAIHNTEGEIELHDITQV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++I D + GFPCQ FS AG
Sbjct: 57 TDDEIREIGHVDAICGGFPCQAFSIAG 83
>gi|256545597|ref|ZP_05472956.1| modification methylase HaeIII (cytosine-specificmethyltransferase
HaeIII) [Anaerococcus vaginalis ATCC 51170]
gi|256398722|gb|EEU12340.1| modification methylase HaeIII (cytosine-specificmethyltransferase
HaeIII) [Anaerococcus vaginalis ATCC 51170]
Length = 340
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF G GG+ L ++ E ++E + +TY+ N LI GDI KI +
Sbjct: 1 MKLISLFSGAGGLDLGFQKA----GYEIVAANEFDKTIWETYEKNHEAKLIKGDIFKIPS 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ P+ D ++ G PCQ +S+AG
Sbjct: 57 DEFPECDGIIGGPPCQSWSEAG 78
>gi|152998369|ref|YP_001343204.1| DNA-cytosine methyltransferase [Marinomonas sp. MWYL1]
gi|150839293|gb|ABR73269.1| DNA-cytosine methyltransferase [Marinomonas sp. MWYL1]
Length = 417
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGG+RL +Q C FSSE + ++ TY+ N DI I
Sbjct: 96 FRFIDLFAGIGGVRLGFQQA----GGTCVFSSEFDKHAQLTYKKNHGEFPFG-DITLISP 150
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ IP HDVLLAGFPCQPFS AG
Sbjct: 151 ESIPAHDVLLAGFPCQPFSHAG 172
>gi|317501747|ref|ZP_07959934.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium
8_1_57FAA]
gi|316896869|gb|EFV18953.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium
8_1_57FAA]
Length = 499
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 45/84 (53%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
++ DLF G+GGIRL E+ +E C FSSEI Y++K YQ F N ++GDI +I
Sbjct: 67 IRFIDLFAGLGGIRLGFEEGLREVGLEAKCVFSSEIKKYAIKAYQGYFGNEKVYGDITQI 126
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+T IPD D LLAGFPCQPFS AG
Sbjct: 127 ETDTIPDFDFLLAGFPCQPFSSAG 150
>gi|312903177|ref|ZP_07762357.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX0635]
gi|310633053|gb|EFQ16336.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX0635]
Length = 398
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-----NTLIFGDI 56
+K DLF GIGG RL +E EC EI+ ++ +Y+A I
Sbjct: 1 MKFLDLFAGIGGFRLGMESA----GHECIGFCEIDKFARTSYKAIHDATGEVEMHDITTI 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I DV+ GFPCQ FS AG
Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83
>gi|323650448|gb|ADX97301.1| M.Fnu4HI [Fusobacterium nucleatum]
Length = 351
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K+ LF G+GGI L EQT + + + +E + + +T++ NF N L DI ++
Sbjct: 1 MYKVASLFAGVGGIDLGFEQTGH---FKTVWXNEYDDKARETFRCNFSNKLNENDIREVD 57
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
Q+IPD D+LL+GFPC FS AG
Sbjct: 58 VQEIPDIDILLSGFPCTSFSVAG 80
>gi|210631776|ref|ZP_03297018.1| hypothetical protein COLSTE_00903 [Collinsella stercoris DSM 13279]
gi|210159896|gb|EEA90867.1| hypothetical protein COLSTE_00903 [Collinsella stercoris DSM 13279]
Length = 390
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGGIR+ + EC FS E + ++ KTY+ N+ T DI ++
Sbjct: 73 FTFIDLFAGIGGIRMPFQ----ELGGECVFSCEWDKFAQKTYRMNYGETPAG-DIREVAA 127
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIPD DVLLAGFPCQPFS AG
Sbjct: 128 SDIPDFDVLLAGFPCQPFSLAG 149
>gi|54293106|ref|YP_125521.1| hypothetical protein lpl0145 [Legionella pneumophila str. Lens]
gi|53752938|emb|CAH14374.1| hypothetical protein lpl0145 [Legionella pneumophila str. Lens]
Length = 417
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59
DLF GIGGIRL E EC F+SE + YS TY+ NF N DI K+
Sbjct: 67 FSFIDLFAGIGGIRLGFE----SIGGECIFTSEWDKYSQITYRKNFRNDHHPIIGDITKV 122
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
IP+HDVLLAGFPCQPFS AG
Sbjct: 123 DVNFIPEHDVLLAGFPCQPFSLAG 146
>gi|223932228|ref|ZP_03624232.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591]
gi|223899209|gb|EEF65566.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591]
Length = 451
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL +E + +C EI+ ++ +Y N + + DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGME----SQGHKCVGFCEIDKFARTSYKAMFNTEGEIEYHDIKEV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
D D++ GFPCQ FS AG
Sbjct: 57 TDHDFRQFRGQVDIICGGFPCQAFSLAG 84
>gi|291530358|emb|CBK95943.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3]
Length = 696
Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60
K DLF GIGGIRL EQ F + + F SE + Y+ +TY+ANF + DI +I
Sbjct: 4 YKSIDLFAGIGGIRLGFEQAFGNS-INTVFVSEWDKYAQETYKANFRDKFDIAGDITQID 62
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+DIPD D+ LAGFPCQ FS AG
Sbjct: 63 ERDIPDFDICLAGFPCQAFSLAG 85
>gi|219724141|ref|YP_002477179.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Borrelia
burgdorferi 156a]
gi|225575842|ref|YP_002724642.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 118a]
gi|219693145|gb|ACL34349.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Borrelia
burgdorferi 156a]
gi|225546742|gb|ACN92742.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 118a]
Length = 311
Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K DLFCGIGG R+ L+ + +EC FS +I+ Y+ YQ NF +GD+ +I
Sbjct: 1 MFKFIDLFCGIGGFRVALQ----KQGMECVFSCDIDKYAQTAYQKNFG-DKPYGDVTEIP 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
IP H++L AGFPCQPFS +G
Sbjct: 56 EDKIPRHEILCAGFPCQPFSISG 78
>gi|293363234|ref|ZP_06610118.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma alligatoris
A21JP2]
gi|292553093|gb|EFF41842.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma alligatoris
A21JP2]
Length = 428
Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF G+GGIR+ EQ + + EC F+SEI +++K Y+ NF ++ I GDI+KI
Sbjct: 13 IKFIDLFAGLGGIRIGFEQALKDKKIKSECVFTSEIKKHAIKAYKNNFKDSNINGDISKI 72
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ IP D LLAGFPCQPFS AG
Sbjct: 73 DLEKIPYFDYLLAGFPCQPFSSAG 96
>gi|238922589|ref|YP_002936102.1| modification methylase [Eubacterium rectale ATCC 33656]
gi|238874261|gb|ACR73968.1| modification methylase [Eubacterium rectale ATCC 33656]
Length = 392
Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGG+RL E + C +S+E N YS +TY ANF DI K+
Sbjct: 65 FTFIDLFAGIGGMRLAYE----NVGGRCVYSNEWNKYSQQTYYANFGEQPEG-DITKVDA 119
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ IPDHD+L+AGFPCQPFS AG
Sbjct: 120 KTIPDHDILVAGFPCQPFSIAG 141
>gi|294155594|ref|YP_003559978.1| cytosine-specific DNA modification methyltransferase [Mycoplasma
crocodyli MP145]
gi|291600134|gb|ADE19630.1| cytosine-specific DNA modification methyltransferase [Mycoplasma
crocodyli MP145]
Length = 388
Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG + EC FSSEI+ Y + TY NF + F DI K+
Sbjct: 6 FKFIDLFSGIGGFHQAMSY----FGGECVFSSEIDKYCINTYFNNFNISSDF-DITKVNV 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+IP HD+L AGFPCQ FS+AG
Sbjct: 61 NEIPKHDLLCAGFPCQAFSKAG 82
>gi|313667088|gb|ADR72987.1| M2.BsmFI [Geobacillus stearothermophilus]
Length = 365
Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ LF G GG+ L + ++ +I+ +V TY+ N + +I GDI KI+ +
Sbjct: 4 TVVSLFSGGGGLDLGF----KNSGFNIIWAIDIDKDAVSTYKENLGDHIILGDITKIQEK 59
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
DIP DV++ G PCQ FS G
Sbjct: 60 DIPKADVVIGGPPCQSFSLVG 80
>gi|147668731|ref|YP_001213549.1| DNA-cytosine methyltransferase [Dehalococcoides sp. BAV1]
gi|146269679|gb|ABQ16671.1| DNA-cytosine methyltransferase [Dehalococcoides sp. BAV1]
Length = 335
Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
++I LF G GG+ L E+ +++E + TYQ NFPNT I +I
Sbjct: 1 MQIISLFSGAGGLDLGFEKA----GFNVVWANEYDKTIWDTYQHNFPNTNLDTRSITEIP 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ +IP D ++ G PCQ +S+AG
Sbjct: 57 STEIPTSDGIIGGPPCQSWSEAG 79
>gi|150400370|ref|YP_001324137.1| DNA-cytosine methyltransferase [Methanococcus vannielii SB]
gi|150013073|gb|ABR55525.1| DNA-cytosine methyltransferase [Methanococcus vannielii SB]
Length = 368
Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN-------HRNVECFFSSEINPYSVKTYQANFPNTLIFG 54
K+ LF G GG+ L + F H E FS++I+ + +TY++NF ++ +
Sbjct: 35 FKVISLFSGCGGMDLGFKGGFEIFKQHYEHNPYEIIFSNDISDKACRTYESNFCHSSVCA 94
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI IK +DIP+ D+++ GFPCQ FS AG
Sbjct: 95 DIKDIKNEDIPNADIVIGGFPCQDFSHAG 123
>gi|315162212|gb|EFU06229.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX0645]
Length = 398
Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+K DLF GIGG RL +E EC EI+ ++ +Y+A I
Sbjct: 1 MKFLDLFAGIGGFRLGMESA----GHECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I DV+ GFPCQ FS AG
Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83
>gi|209901299|ref|YP_002290938.1| putative DNA methylase [Clostridium phage phiCD27]
gi|199612180|gb|ACH91353.1| putative DNA methylase [Clostridium phage phiCD27]
Length = 276
Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIA 57
ML DLF GIGG RL +E+ +C E + ++ +Y A DI
Sbjct: 1 MLTFLDLFAGIGGFRLGMEKA----GHKCLGHCEYDKFANLSYNAMHKPKEDEWFERDIR 56
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
+I+T++IP DV GFPCQ S AG
Sbjct: 57 EIRTENIPRADVWCFGFPCQDISVAG 82
>gi|188527161|ref|YP_001909848.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi470]
gi|188143401|gb|ACD47818.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi470]
Length = 309
Score = 90.0 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GIGG E F E +++E++ + TY+ANF + L+ DI +
Sbjct: 1 MKVGSLFAGIGGF----ECAFLQAGFEIDWANELDKDACNTYRANFKHKLLEQDIKDLNP 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++ D ++ AGFPCQ FS AG
Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78
>gi|9622224|gb|AAF89681.1| cytosine-specific methyltransferase [Bacillus sp. LU11]
Length = 365
Score = 90.0 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ LF G GG+ L + ++ +I+ +V TY+ N + +I GDI KI+ +
Sbjct: 4 TVVSLFSGGGGLDLGF----KNSGFNIIWAIDIDKDAVLTYKENLGDHIILGDITKIQEK 59
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
DIP+ DV++ G PCQ FS G
Sbjct: 60 DIPEADVVIGGPPCQSFSLVG 80
>gi|218900599|ref|YP_002449010.1| modification methylase HaeIII [Bacillus cereus G9842]
gi|218543463|gb|ACK95857.1| modification methylase HaeIII [Bacillus cereus G9842]
Length = 313
Score = 90.0 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF G GG+ L Q + ++++I+ +V+TY+ N N ++ D+ ++ T
Sbjct: 1 MKVISLFSGAGGLDLGFVQA----GHQIIWANDIDKDAVETYKKNLGNHIVLKDLKEVDT 56
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
DIPD D+++ GFPCQ FS A
Sbjct: 57 NDIPDADIVIGGFPCQGFSVA 77
>gi|290969050|ref|ZP_06560585.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
gi|290781006|gb|EFD93599.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
Length = 333
Score = 90.0 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY-QANFPNTLIFGDIAKI 59
M + DLF GIGGIRL EQ F + F+SE N S +TY IFGDI I
Sbjct: 1 MYRAIDLFAGIGGIRLGFEQAFGAE-MTTVFTSEWNKKSQETYLANFGEEIHIFGDITAI 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
++IP HD+LLAGFPCQ FS AG
Sbjct: 60 DERNIPPHDILLAGFPCQAFSLAG 83
>gi|217964683|ref|YP_002350361.1| cytosine-specific methyltransferase [Listeria monocytogenes
HCC23]
gi|217333953|gb|ACK39747.1| cytosine-specific methyltransferase [Listeria monocytogenes
HCC23]
Length = 340
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
+K DLF GIGG RL +E+ EC EI+ K+YQ + DI K+
Sbjct: 1 MKFLDLFAGIGGFRLGMERA----GHECVGYVEIDKSPRKSYQAIHDTEGEWTREDITKV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
++ D++ GFPCQ FS AG
Sbjct: 57 TDEEWRTLRGTVDIICGGFPCQSFSIAG 84
>gi|311977229|gb|ADQ20489.1| M.AspCNI [Acinetobacter sp. 1690]
Length = 327
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L LF G GG+ L Q + ++++IN ++ KTY N + ++ GDI +I
Sbjct: 4 LTAISLFSGCGGMDLGFVQA----GFDVLWANDINGFACKTYAHNIGDHIVHGDITEIDY 59
Query: 62 QDIPDHDVLLAGFPCQPFSQ 81
Q IP D+++ GFPCQ FS
Sbjct: 60 QSIPTADIIIGGFPCQDFSM 79
>gi|268611036|ref|ZP_06144763.1| prophage LambdaSa2, type II DNA modification methyltransferase,
putative [Ruminococcus flavefaciens FD-1]
Length = 425
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAK 58
M++ D+F GIGG R LE+ EC EI+ ++ + Y+ + + + D K
Sbjct: 1 MIRYLDMFAGIGGFRSGLERVG---GFECVGYCEIDKFAKQAYEALYDTSKEVYYDDATK 57
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
I +D+PD D++ GFPCQ FS AG
Sbjct: 58 IVPEDLPDIDLICGGFPCQSFSIAG 82
>gi|195867949|ref|ZP_03079946.1| cytosine-specific methyltransferase [Ureaplasma urealyticum
serovar 9 str. ATCC 33175]
gi|195660345|gb|EDX53605.1| cytosine-specific methyltransferase [Ureaplasma urealyticum
serovar 9 str. ATCC 33175]
Length = 319
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+K+ LF GIGGI +Q + +++EI+ + KTY+ NF ++ + GDI I
Sbjct: 4 IKVASLFAGIGGICYGFKQA----GAKIVWANEIDRDACKTYRYNFGDSYLVEGDIKNIG 59
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPD D+L GFPCQ FS AG
Sbjct: 60 PNDIPDIDILNGGFPCQAFSIAG 82
>gi|209554428|ref|YP_002284952.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|209541929|gb|ACI60158.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
Length = 319
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+K+ LF GIGGI +Q + +++EI+ + KTY+ NF ++ + GDI I
Sbjct: 4 IKVASLFAGIGGICYGFKQA----GAKIVWANEIDRDACKTYRYNFGDSYLVEGDIKNIG 59
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPD D+L GFPCQ FS AG
Sbjct: 60 PNDIPDIDILNGGFPCQAFSIAG 82
>gi|171920707|ref|ZP_02931926.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|185179015|ref|ZP_02964765.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188024024|ref|ZP_02996783.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|188518336|ref|ZP_03003849.1| cytosine-specific methyltransferase NlaX [Ureaplasma urealyticum
serovar 11 str. ATCC 33695]
gi|188524309|ref|ZP_03004347.1| cytosine-specific methyltransferase [Ureaplasma urealyticum
serovar 12 str. ATCC 33696]
gi|198273488|ref|ZP_03206024.1| cytosine-specific methyltransferase [Ureaplasma urealyticum
serovar 4 str. ATCC 27816]
gi|225550923|ref|ZP_03771872.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum
serovar 2 str. ATCC 27814]
gi|225551062|ref|ZP_03772008.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum
serovar 8 str. ATCC 27618]
gi|171903447|gb|EDT49736.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|184209104|gb|EDU06147.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188019052|gb|EDU57092.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|188997975|gb|EDU67072.1| cytosine-specific methyltransferase NlaX [Ureaplasma urealyticum
serovar 11 str. ATCC 33695]
gi|195660089|gb|EDX53469.1| cytosine-specific methyltransferase [Ureaplasma urealyticum
serovar 12 str. ATCC 33696]
gi|198250008|gb|EDY74788.1| cytosine-specific methyltransferase [Ureaplasma urealyticum
serovar 4 str. ATCC 27816]
gi|225378877|gb|EEH01242.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum
serovar 8 str. ATCC 27618]
gi|225380077|gb|EEH02439.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum
serovar 2 str. ATCC 27814]
Length = 319
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+K+ LF GIGGI +Q + +++EI+ + KTY+ NF ++ + GDI I
Sbjct: 4 IKVASLFAGIGGICYGFKQA----GAKIVWANEIDRDACKTYRYNFGDSYLVEGDIKNIG 59
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPD D+L GFPCQ FS AG
Sbjct: 60 PNDIPDIDILNGGFPCQAFSIAG 82
>gi|257061088|ref|YP_003138976.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|256591254|gb|ACV02141.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 331
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL EQ +C +S EIN Y K Y NF D+ +I
Sbjct: 6 FKFIDLFAGIGGFRLAFEQAQ----YQCVYSCEINEYCQKVYYNNFDECPDN-DVTQINP 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+PD DVL AGFPCQPFS G
Sbjct: 61 DTLPDFDVLTAGFPCQPFSICG 82
>gi|160933407|ref|ZP_02080795.1| hypothetical protein CLOLEP_02253 [Clostridium leptum DSM 753]
gi|156867284|gb|EDO60656.1| hypothetical protein CLOLEP_02253 [Clostridium leptum DSM 753]
Length = 382
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
+ DLF GIGG R L + C EI+ Y+ ++Y+ + D+ +
Sbjct: 5 ITYIDLFSGIGGFREGLSRAG---GFVCVGHCEIDKYADQSYRALFDTKGEWFREDVREA 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
++PD D+L GFPCQ FS AG
Sbjct: 62 DPDEMPDFDLLCGGFPCQSFSIAG 85
>gi|226942156|ref|YP_002797230.1| Cytosine-specific methyltransferase [Laribacter hongkongensis
HLHK9]
gi|226717083|gb|ACO76221.1| Cytosine-specific methyltransferase [Laribacter hongkongensis
HLHK9]
Length = 420
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--FGDIAKI 59
DLF GIGGIR E C F+SE + Y+ KTY N GDI ++
Sbjct: 71 FTFIDLFAGIGGIRQAFE----DVGGRCVFTSEWDSYAQKTYAENHRRDAHALNGDITQV 126
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
DIP HDVLLAGFPCQPFS AG
Sbjct: 127 GAADIPAHDVLLAGFPCQPFSIAG 150
>gi|91206207|ref|YP_538562.1| site-specific DNA methylase [Rickettsia bellii RML369-C]
gi|91069751|gb|ABE05473.1| Site-specific DNA methylase [Rickettsia bellii RML369-C]
Length = 308
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K DLFCGIGG R LE +N+EC FSS+I+ + Y+ NF + DI ++
Sbjct: 1 MYKFIDLFCGIGGFRKALE----SKNLECVFSSDIDKDVQEAYKRNFGDKPHG-DITEMP 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
IP HD+L AGFPCQ FS +G
Sbjct: 56 ANKIPKHDILCAGFPCQSFSISG 78
>gi|319744643|gb|EFV96990.1| type II DNA modification methyltransferase Spn5252IP
[Streptococcus agalactiae ATCC 13813]
Length = 451
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL LE + +C EI+ ++ +Y N + + DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGLE----SQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
D D++ GFPCQ FS AG
Sbjct: 57 TDHDFRQFRGQVDIICGGFPCQAFSLAG 84
>gi|331091354|ref|ZP_08340194.1| hypothetical protein HMPREF9477_00837 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404515|gb|EGG84059.1| hypothetical protein HMPREF9477_00837 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 391
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG + + EC F+SEI+ Y+++TY+ N+ +I +
Sbjct: 5 FKFIDLFAGIGGFHQAMH----NLGGECVFASEIDKYAIETYKTNYGVDAGI-NIRDVHE 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIP+HDVL AGFPCQ FS+AG
Sbjct: 60 EDIPEHDVLCAGFPCQAFSKAG 81
>gi|167761084|ref|ZP_02433211.1| hypothetical protein CLOSCI_03482 [Clostridium scindens ATCC
35704]
gi|167661318|gb|EDS05448.1| hypothetical protein CLOSCI_03482 [Clostridium scindens ATCC
35704]
Length = 405
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGG + C F+SEI+ Y ++TYQ N+ DI +
Sbjct: 23 FTFIDLFSGIGGFHQAMS----SLGGRCVFASEIDKYCIETYQENYGMDSGI-DIRNVDE 77
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIP HDVL AGFPCQ FS+AG
Sbjct: 78 KDIPPHDVLCAGFPCQAFSKAG 99
>gi|220903553|ref|YP_002478865.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219867852|gb|ACL48187.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 308
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF G GG+ L + + +++++ +VKTY+ N + ++ DI+++ T
Sbjct: 1 MKVVSLFSGAGGLDLGFKMAGHS----IIWANDVYEDAVKTYRMNIGDHILCKDISQVTT 56
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
++PD D+++ GFPCQ FS A
Sbjct: 57 AEVPDSDIIIGGFPCQGFSVA 77
>gi|309809233|ref|ZP_07703103.1| modification methylase HaeIII [Lactobacillus iners SPIN
2503V10-D]
gi|308170467|gb|EFO72490.1| modification methylase HaeIII [Lactobacillus iners SPIN
2503V10-D]
Length = 340
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF G GG+ L ++ E ++E + KTY+ N LI GDI KI +
Sbjct: 1 MKLISLFSGAGGLDLGFKKA----GYEIVVANEFDKTIWKTYEKNNATKLIKGDICKIPS 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ P D ++ G PCQ +S+AG
Sbjct: 57 DEFPKCDGIIGGPPCQSWSEAG 78
>gi|126464142|ref|YP_001045255.1| DNA-cytosine methyltransferase [Rhodobacter sphaeroides ATCC 17029]
gi|126105953|gb|ABN78483.1| DNA-cytosine methyltransferase [Rhodobacter sphaeroides ATCC 17029]
Length = 417
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAK 58
+ DLF GIGG+R + C F+SE + ++ +TY+AN+ + + GDI K
Sbjct: 62 FRFIDLFAGIGGLRRGF----DAVGGHCVFTSEWDRFAQQTYRANYHDGPAHVFKGDITK 117
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
++ +IP+HDVLLAGFPCQPFS AG
Sbjct: 118 VEMHEIPEHDVLLAGFPCQPFSIAG 142
>gi|325912401|ref|ZP_08174796.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII
143-D]
gi|325475743|gb|EGC78914.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII
143-D]
Length = 336
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL LE +C +S+E + ++ +TYQ NF +T DI ++
Sbjct: 12 YKFIDLFAGIGGFRLALE----SFGAKCVYSNEWDRFAQETYQMNFGDTPEG-DITQVDE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L AGFPCQPFS +G
Sbjct: 67 TSIPDHDILCAGFPCQPFSISG 88
>gi|220930232|ref|YP_002507141.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10]
gi|220000560|gb|ACL77161.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10]
Length = 416
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L DLF GIGGIRL E + +C FSSE + Y+ +TY+AN+ DI KI
Sbjct: 101 LTFIDLFAGIGGIRLGFEDKYT----KCVFSSEWDKYAAQTYEANYGEKPHG-DITKINE 155
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIPDHDVLLAGFPCQPFS G
Sbjct: 156 NDIPDHDVLLAGFPCQPFSNIG 177
>gi|219855710|ref|YP_002472832.1| hypothetical protein CKR_2367 [Clostridium kluyveri NBRC 12016]
gi|219569434|dbj|BAH07418.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 419
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L DLF GIGGIRL E + +C FSSE + Y+ +TY+AN+ DI KI
Sbjct: 104 LTFIDLFAGIGGIRLGFEDKYT----KCVFSSEWDKYAAQTYEANYGEKPHG-DITKINE 158
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIPDHDVLLAGFPCQPFS G
Sbjct: 159 NDIPDHDVLLAGFPCQPFSNIG 180
>gi|153955289|ref|YP_001396054.1| DNA methylase [Clostridium kluyveri DSM 555]
gi|146348147|gb|EDK34683.1| Predicted DNA methylase [Clostridium kluyveri DSM 555]
Length = 416
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L DLF GIGGIRL E + +C FSSE + Y+ +TY+AN+ DI KI
Sbjct: 101 LTFIDLFAGIGGIRLGFEDKYT----KCVFSSEWDKYAAQTYEANYGEKPHG-DITKINE 155
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIPDHDVLLAGFPCQPFS G
Sbjct: 156 NDIPDHDVLLAGFPCQPFSNIG 177
>gi|167854495|ref|ZP_02477276.1| cyclic 3',5'-adenosine monophosphate phosphodiesterase
[Haemophilus parasuis 29755]
gi|219872138|ref|YP_002476513.1| DNA-cytosine methyltransferase/C-5 cytosine-specific DNA
methylase [Haemophilus parasuis SH0165]
gi|167854250|gb|EDS25483.1| cyclic 3',5'-adenosine monophosphate phosphodiesterase
[Haemophilus parasuis 29755]
gi|219692342|gb|ACL33565.1| DNA-cytosine methyltransferase/C-5 cytosine-specific DNA
methylase [Haemophilus parasuis SH0165]
Length = 320
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKT-YQANFPNTLIF 53
++ LF G GG+ L + F+ N E ++++IN + KT ++
Sbjct: 5 FRVISLFSGAGGLDLGFKGGFDFLNKRYDENPFEVVWANDINEKACKTLKHNFPETPVVC 64
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
GDI + +P+ DV+L GFPCQ FS AG
Sbjct: 65 GDITLVDKSTLPEADVVLGGFPCQDFSLAG 94
>gi|224436796|ref|ZP_03657794.1| modification methylase HaeIII [Helicobacter cinaedi CCUG 18818]
gi|313143285|ref|ZP_07805478.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi
CCUG 18818]
gi|313128316|gb|EFR45933.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi
CCUG 18818]
Length = 305
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF G GG+ L + E F+++I+ + ++YQ N N ++ DI ++
Sbjct: 4 IKVISLFSGCGGLDLGFIKA----GFEIVFANDIDKEACESYQKNIGNHIVCKDIYTLEV 59
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
++IP+ D+L+ GFPC F+ A
Sbjct: 60 EEIPNADILIGGFPCLGFTIA 80
>gi|322411818|gb|EFY02726.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 451
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL L ++ EC EI+ +++K+Y + F DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGLT----NQGHECIGFCEIDKFAMKSYKAIYETEGEIEFHDIRQV 56
Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83
QD D++ GFPCQ FS AG
Sbjct: 57 TDQDFKQLRGQVDIICGGFPCQAFSLAG 84
>gi|254445875|ref|ZP_05059351.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae
bacterium DG1235]
gi|198260183|gb|EDY84491.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae
bacterium DG1235]
Length = 321
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGG R+ LE EC FSSEI+ ++ TY+ NF + DI KI
Sbjct: 7 FRFIDLFAGIGGFRIGLE----RLGGECVFSSEIDRHAAATYERNFGHKPAG-DITKIDA 61
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++PDH+V+ GFPCQPFS +G
Sbjct: 62 SEVPDHEVICGGFPCQPFSVSG 83
>gi|319745928|gb|EFV98213.1| type II DNA modification methyltransferase [Streptococcus
agalactiae ATCC 13813]
Length = 454
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL L ++ EC EI+ ++ K+Y + F DI ++
Sbjct: 4 MKFLDLFAGIGGFRLGLT----NQGHECIGFCEIDKFARKSYKAIYETEGEIEFHDIRQV 59
Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83
QD D++ GFPCQ FS AG
Sbjct: 60 TDQDFKQLRGQVDIICGGFPCQAFSLAG 87
>gi|253755079|ref|YP_003028219.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407]
gi|251817543|emb|CAZ55290.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407]
Length = 451
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL +E + +C EI+ ++ +Y N + + DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGME----SQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
D D++ GFPCQ FS AG
Sbjct: 57 TDHDFRQFRGQVDIICGGFPCQAFSLAG 84
>gi|157419765|gb|ABV55454.1| DNA methylase [Streptococcus dysgalactiae subsp. equisimilis]
Length = 451
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL +E + +C EI+ ++ +Y N + + DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGME----SQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
D D++ GFPCQ FS AG
Sbjct: 57 TDHDFRQFRGQVDIICGGFPCQAFSLAG 84
>gi|146318633|ref|YP_001198345.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 05ZYH33]
gi|146320840|ref|YP_001200551.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 98HAH33]
gi|253751755|ref|YP_003024896.1| C-5 cytosine-specific DNA methylase [Streptococcus suis SC84]
gi|253755540|ref|YP_003028680.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407]
gi|145689439|gb|ABP89945.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 05ZYH33]
gi|145691646|gb|ABP92151.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 98HAH33]
gi|251816044|emb|CAZ51664.1| C-5 cytosine-specific DNA methylase [Streptococcus suis SC84]
gi|251818004|emb|CAZ55786.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407]
Length = 451
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL +E + +C EI+ ++ +Y N + + DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGME----SQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
D D++ GFPCQ FS AG
Sbjct: 57 TDHDFRQFRGQVDIICGGFPCQAFSLAG 84
>gi|22537444|ref|NP_688295.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae
2603V/R]
gi|76797962|ref|ZP_00780222.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae
18RS21]
gi|77406085|ref|ZP_00783160.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae
H36B]
gi|313890485|ref|ZP_07824113.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus
SPIN 20026]
gi|22534321|gb|AAN00168.1|AE014251_12 C-5 cytosine-specific DNA methylase [Streptococcus agalactiae
2603V/R]
gi|76586686|gb|EAO63184.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae
18RS21]
gi|77175318|gb|EAO78112.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae
H36B]
gi|313121002|gb|EFR44113.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus
SPIN 20026]
gi|323127117|gb|ADX24414.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
Length = 451
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL +E + +C EI+ ++ +Y N + + DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGME----SQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
D D++ GFPCQ FS AG
Sbjct: 57 TDHDFRQFRGQVDIICGGFPCQAFSLAG 84
>gi|319746106|gb|EFV98380.1| type II DNA modification methyltransferase Spn5252IP
[Streptococcus agalactiae ATCC 13813]
Length = 458
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL L ++ EC EI+ ++ K+Y + F DI ++
Sbjct: 4 MKFLDLFAGIGGFRLGLT----NQGHECIGFCEIDKFARKSYKAIYKTEGEIEFHDIRQV 59
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
QD D++ GFPCQ FS AG
Sbjct: 60 TDQDFRQLRGQVDIICGGFPCQAFSLAG 87
>gi|218900598|ref|YP_002449009.1| modification methylase HaeIII [Bacillus cereus G9842]
gi|218544695|gb|ACK97089.1| modification methylase HaeIII [Bacillus cereus G9842]
Length = 313
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
++K+ LF G GG+ L Q E +++++ + +TY+ N N ++ D+ ++
Sbjct: 3 IMKVISLFSGAGGMDLGFIQA----GHEIIWANDLYEDAAETYKKNIGNHIVLKDLKEVD 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
T +IPD D+++ GFPCQ FS A
Sbjct: 59 TNNIPDGDIVIGGFPCQGFSVA 80
>gi|157737722|ref|YP_001490405.1| DNA (cytosine-5-)-methyltransferase [Arcobacter butzleri RM4018]
gi|157699576|gb|ABV67736.1| DNA (Cytosine-5-)-methyltransferase [Arcobacter butzleri RM4018]
Length = 326
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGGIR E+ F + E F+SE++ Y+ Y N +GDI KIK
Sbjct: 20 YKFIDLFAGIGGIRTGFEKVFKEES-EFVFASELDKYAQIAYF-ENYNEKPYGDITKIKE 77
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIP+HD++LAGFPCQ FS AG
Sbjct: 78 EDIPNHDIILAGFPCQAFSIAG 99
>gi|282899236|ref|ZP_06307209.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis
raciborskii CS-505]
gi|281195872|gb|EFA70796.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis
raciborskii CS-505]
Length = 422
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58
M++ DLF GIGG+RL +Q + EC SSEI+ +V+TY+ NF GDI +
Sbjct: 1 MIRFIDLFAGIGGMRLGFQQACDVLGVEYECVLSSEIDKKAVETYKINFD-DQPRGDIRE 59
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
I +P+ D +LAGFPCQPFS AG
Sbjct: 60 IDI--MPEFDFMLAGFPCQPFSYAG 82
>gi|268680341|ref|YP_003304772.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM
6946]
gi|268618372|gb|ACZ12737.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM
6946]
Length = 335
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+ I LF G GG+ L E+ + +++E + +T++ NFP+T I I
Sbjct: 1 MNIISLFSGAGGLDLGFEKA----GFKTVWANEYDKEIWETFEKNFPHTTLDRRSIRNIP 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ DIP+ L+ G PCQ +S+AG
Sbjct: 57 SCDIPEAIGLIGGPPCQSWSEAG 79
>gi|238917714|ref|YP_002931231.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC
27750]
gi|238873074|gb|ACR72784.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC
27750]
Length = 311
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ F G+GG+ + ++++ + Y+V+TY+ANF ++ GDI +I
Sbjct: 1 MKVVSFFSGLGGLDKGF----VDTGYDIIWANDFDKYAVQTYKANFGEHIVLGDINEIPL 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++IPD D+L+ GFPCQPFS G
Sbjct: 57 EEIPDCDILIGGFPCQPFSMMG 78
>gi|224796590|ref|YP_002641667.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 64b]
gi|223929176|gb|ACN23896.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 64b]
gi|312149869|gb|ADQ29935.1| DNA-cytosine methyltransferase [Borrelia burgdorferi N40]
Length = 324
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K DLFCGIGG R+ L+ + +EC FS +I+ Y+ YQ NF +GD+ +I
Sbjct: 14 MFKFIDLFCGIGGFRVALQ----KQGMECVFSCDIDKYAQTAYQKNFG-DKPYGDVTEIP 68
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
IP H++L AGFPCQPFS +G
Sbjct: 69 EDKIPRHEILCAGFPCQPFSISG 91
>gi|127427|sp|P17044|MTBF_BACSU RecName: Full=Modification methylase BsuFI; Short=M.BsuFI; AltName:
Full=Cytosine-specific methyltransferase BsuFI
gi|39984|emb|CAA35888.1| unnamed protein product [Bacillus subtilis]
Length = 409
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/82 (53%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L DLF GIGGIRL E + +C FSSE + Y+ +TY+AN+ DI KI
Sbjct: 101 LTFIDLFAGIGGIRLGFEDKYT----KCVFSSEWDKYAAQTYEANYGEKPHG-DITKINE 155
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIPD DVLLAGFPCQPFS G
Sbjct: 156 NDIPDQDVLLAGFPCQPFSNIG 177
>gi|255520393|ref|ZP_05387630.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes FSL
J1-175]
Length = 451
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
+ DLF GIGG RL +E C EI+ Y+ K+YQ + DI K+
Sbjct: 1 MNFLDLFAGIGGFRLGMEAA----GHTCVGYVEIDKYARKSYQAIHDTEGEWTAHDITKV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
+ DV+ GFPCQ FS AG
Sbjct: 57 TDDEWRELRGTVDVICGGFPCQSFSIAG 84
>gi|317010127|gb|ADU80707.1| DNA-cytosine methyltransferase [Helicobacter pylori India7]
Length = 703
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML DLF GIGG RL L + ++C FS+E NP+++ Y+ N DI +
Sbjct: 1 MLTYADLFAGIGGFRLAL----DSLGLKCVFSAENNPHAIAMYK-ANFNDDSTCDITILN 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+P+ D+L AGFPCQ FS G
Sbjct: 56 PNTMPNFDILCAGFPCQAFSVCG 78
>gi|207091758|ref|ZP_03239545.1| putative site-specific DNA-methyltransferase [Helicobacter pylori
HPKX_438_AG0C1]
Length = 703
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML DLF GIGG RL L + ++C FS+E NP+++ Y+ N DI +
Sbjct: 1 MLTYADLFAGIGGFRLAL----DSLGLKCVFSAENNPHAIAMYK-ANFNDDSTCDITILN 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+P+ D+L AGFPCQ FS G
Sbjct: 56 PNTMPNFDILCAGFPCQAFSVCG 78
>gi|225858823|ref|YP_002740333.1| methyl transferase [Streptococcus pneumoniae 70585]
gi|225720620|gb|ACO16474.1| methyl transferase [Streptococcus pneumoniae 70585]
Length = 451
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL +E + EC EI+ ++ +Y + + DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGME----AQGHECLGFCEIDKFARTSYKAMFKTEEEIEYHDIKEV 56
Query: 60 KTQD----IPDHDVLLAGFPCQPFSQAG 83
D DV+ GFPCQ FS AG
Sbjct: 57 TDHDIRQFRGQVDVICGGFPCQAFSLAG 84
>gi|312386601|emb|CBY05924.1| putative DNA methylase [Streptococcus pneumoniae]
Length = 452
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
++ DLF GIGG RL +E EC EI+ ++ + F DI +
Sbjct: 1 MRFIDLFSGIGGFRLGME----SVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 56
Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83
+ DV+ GFPCQ FS AG
Sbjct: 57 SDDEFKKLRGKVDVICGGFPCQAFSIAG 84
>gi|320331203|gb|EFW87160.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330882725|gb|EGH16874.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 420
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60
+ DLF GIGGIR+ E EC F+SE N +S KTY N+ + F DI
Sbjct: 69 FRFVDLFAGIGGIRMGFE----AHGGECVFTSEWNDFSKKTYIENYGDRHQFVGDIVPFP 124
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+D+P+HDVLL GFPCQPFS AG
Sbjct: 125 AEDVPNHDVLLGGFPCQPFSIAG 147
>gi|228969065|ref|ZP_04129983.1| Cytosine-specific methyltransferase [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228790631|gb|EEM38314.1| Cytosine-specific methyltransferase [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 326
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
L DLF GIGG RL +EQ +C E + ++ K+Y N DI +
Sbjct: 3 LTFIDLFAGIGGFRLGMEQA----GHKCLGYVEWDKFARKSYEAIHNTKGEWTEHDITTV 58
Query: 60 KTQD----IPDHDVLLAGFPCQPFSQAG 83
D DV+ GFPCQ FS AG
Sbjct: 59 TNDDLRLFRGQVDVICGGFPCQAFSIAG 86
>gi|332361316|gb|EGJ39120.1| type II DNA modification methyltransferase Spn5252IP
[Streptococcus sanguinis SK1056]
Length = 454
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKI 59
+K DLF GIGG R+ LE + EC EI+ ++ K+YQA + DI ++
Sbjct: 4 MKFLDLFAGIGGFRMGLE----SQGHECIGYCEIDKFARKSYQAIYDTEGEIELHDIRQV 59
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
QD D++ GFPCQ FS AG
Sbjct: 60 TDQDFRQLRGQVDIICGGFPCQAFSLAG 87
>gi|228469904|ref|ZP_04054843.1| cytosine-specific methyltransferase NlaX [Porphyromonas uenonis
60-3]
gi|228308539|gb|EEK17327.1| cytosine-specific methyltransferase NlaX [Porphyromonas uenonis
60-3]
Length = 395
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 48/90 (53%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--------NTLIF 53
L DLF GIGG L + +C F+SE + Y+ +TY+AN+ L
Sbjct: 34 LTFIDLFAGIGGFHLAMH----SVGAQCVFASEWDQYARQTYEANYRKLAPELFSRGLFA 89
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
GDI K+ IP D+L AGFPCQPFS AG
Sbjct: 90 GDITKVDPASIPPFDILCAGFPCQPFSVAG 119
>gi|220903552|ref|YP_002478864.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219867851|gb|ACL48186.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 310
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++I LF G GG+ L L Q E ++++ + V TY+ N N + GDI KI
Sbjct: 1 MRIVSLFSGAGGLDLGLIQA----GHEIVWANDFDKDCVATYKKNIGNHAVLGDIKKINA 56
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
IP +V++ GFPCQ FSQA
Sbjct: 57 SQIPRGEVVVGGFPCQGFSQA 77
>gi|225869346|ref|YP_002745294.1| C-5 cytosine-specific DNA methylase [Streptococcus equi subsp.
zooepidemicus]
gi|225702622|emb|CAX00673.1| C-5 cytosine-specific DNA methylase [Streptococcus equi subsp.
zooepidemicus]
Length = 451
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL L + +C EI+ ++ K+Y + F DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGLT----RQGHKCIGFCEIDKFARKSYKAIYETKGEIEFHDIRQV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
QD D++ GFPCQ FS AG
Sbjct: 57 TDQDFRQLRGQMDIICGGFPCQAFSLAG 84
>gi|322411604|gb|EFY02512.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 451
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL L + EC EI+ ++ K+Y + F DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGL----IRQGHECIGFCEIDKFARKSYKAIYETKGEIEFHDIRQV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
QD D++ GFPCQ FS AG
Sbjct: 57 TDQDFRQLRGQVDIICGGFPCQAFSLAG 84
>gi|321156918|emb|CBW38908.1| putative DNA methylase [Streptococcus pneumoniae]
Length = 452
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
++ DLF GIGG RL +E EC EI+ ++ + F DI +
Sbjct: 1 MRFIDLFSGIGGFRLGME----SVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 56
Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83
+ D++ GFPCQ FS AG
Sbjct: 57 SDDEFKKLRGKVDIICGGFPCQAFSIAG 84
>gi|169832810|ref|YP_001694558.1| methyl transferase [Streptococcus pneumoniae Hungary19A-6]
gi|168995312|gb|ACA35924.1| methyl transferase [Streptococcus pneumoniae Hungary19A-6]
Length = 452
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
++ DLF GIGG RL +E EC EI+ ++ + F DI +
Sbjct: 1 MRFIDLFSGIGGFRLGME----SVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 56
Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83
+ DV+ GFPCQ FS AG
Sbjct: 57 SDDEFKKLRGKVDVICGGFPCQAFSIAG 84
>gi|225856779|ref|YP_002738290.1| methyl transferase [Streptococcus pneumoniae P1031]
gi|225724445|gb|ACO20297.1| methyl transferase [Streptococcus pneumoniae P1031]
Length = 452
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
++ DLF GIGG RL +E EC EI+ ++ K+Y + F DI +
Sbjct: 1 MRFIDLFSGIGGFRLGME----SVGHECIGFCEIDKFARKSYKSIFQTEGEIEFHDIRDV 56
Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83
+ D++ GFPCQ FS AG
Sbjct: 57 SDAEFKKLRGKVDIICGGFPCQAFSIAG 84
>gi|24527986|emb|CAD33713.1| putative DNA methylase [Escherichia coli]
Length = 310
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF G GG+ L L+Q+ ++ ++++I +V TY+ N ++ GDIA I +
Sbjct: 1 MKVVSLFSGAGGLDLGLKQS----GLDIIWANDIYEDAVDTYKRNIGEHIVLGDIANINS 56
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
DIP+ DV++ GFPCQ FS A
Sbjct: 57 SDIPNCDVVVGGFPCQGFSVA 77
>gi|332075476|gb|EGI85945.1| modification methylase HpaII [Streptococcus pneumoniae GA41301]
Length = 452
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
++ DLF GIGG RL +E EC EI+ ++ + F DI +
Sbjct: 1 MRFIDLFSGIGGFRLGME----SVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 56
Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83
+ DV+ GFPCQ FS AG
Sbjct: 57 SDDEFKKLRGEVDVICGGFPCQAFSIAG 84
>gi|289167633|ref|YP_003445902.1| methyl transferase [Streptococcus mitis B6]
gi|288907200|emb|CBJ22035.1| methyl transferase [Streptococcus mitis B6]
Length = 452
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
++ DLF GIGG RL +E EC EI+ ++ K+Y + F DI +
Sbjct: 1 MRFIDLFSGIGGFRLGME----SVGHECIGFCEIDKFARKSYKSIFQTEGEIEFHDIRDV 56
Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83
+ DV+ GFPCQ FS AG
Sbjct: 57 SDDEFKKLRGKVDVICGGFPCQAFSIAG 84
>gi|327534643|gb|AEA93477.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis OG1RF]
Length = 334
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56
++ DLF GIGG RL +E +H C EI+ Y+ K+YQA +
Sbjct: 1 MEFLDLFAGIGGFRLGMEMAGHH----CIGFCEIDKYARKSYQAIHQTKGEIELHDITSV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q I D+L GFPCQ FS AG
Sbjct: 57 SNEFIQSIGHTDILCGGFPCQAFSIAG 83
>gi|308061739|gb|ADO03627.1| DNA-cytosine methyltransferase [Helicobacter pylori Cuz20]
Length = 704
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML DLF GIGG RL L + ++C FS+E NP+++ YQ + DI +
Sbjct: 1 MLTYADLFAGIGGFRLAL----DSLGLKCVFSAENNPHAIAMYQ-ANFDDDSTCDITLLN 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+P+ D+L AGFPCQ FS G
Sbjct: 56 PNTMPNFDILCAGFPCQAFSVCG 78
>gi|315035876|gb|EFT47808.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX0027]
Length = 298
Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+K DLF GIGG RL +E EC EI+ ++ +Y+A I
Sbjct: 1 MKFLDLFAGIGGFRLGMESA----GHECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++I DV+ GFPCQ FS AG
Sbjct: 57 SDEFIREIGSVDVICGGFPCQAFSIAG 83
>gi|163732386|ref|ZP_02139832.1| hypothetical protein RLO149_03007 [Roseobacter litoralis Och 149]
gi|161394684|gb|EDQ19007.1| hypothetical protein RLO149_03007 [Roseobacter litoralis Och 149]
Length = 410
Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60
DLF GIGG+R +E C F+SE + ++ +TY ANFP+ DI +I
Sbjct: 63 FSFIDLFAGIGGLRKAMESA----GGRCVFTSEWDRFAQQTYDANFPDNRPIAGDITEID 118
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+++P+HDVL+AGFPCQPFS AG
Sbjct: 119 AEELPEHDVLVAGFPCQPFSIAG 141
>gi|78778033|ref|YP_394348.1| DNA (cytosine-5-)-methyltransferase., Type II site-specific
deoxyribonuclease [Sulfurimonas denitrificans DSM 1251]
gi|78498573|gb|ABB45113.1| DNA (cytosine-5-)-methyltransferase., Type II site-specific
deoxyribonuclease [Sulfurimonas denitrificans DSM 1251]
Length = 657
Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--------IF 53
DLF GIGG + EC F+SEI+ Y+ KTY+ NF
Sbjct: 6 FTFIDLFAGIGGFHQAMH----ELGGECVFASEIDIYARKTYKYNFKKYSPELFENGLFN 61
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI I ++IPD D+L AGFPCQPFSQAG
Sbjct: 62 EDIKTIMPEEIPDFDLLCAGFPCQPFSQAG 91
>gi|308126237|ref|ZP_05908633.2| DNA (cytosine-5-)-methyltransferase [Vibrio parahaemolyticus
AQ4037]
gi|308107574|gb|EFO45114.1| DNA (cytosine-5-)-methyltransferase [Vibrio parahaemolyticus
AQ4037]
Length = 426
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/82 (52%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGGIRL + +C F+SEI+ ++ +TY ANF DI KI
Sbjct: 85 FTFIDLFAGIGGIRLPFQ----EVGGKCVFTSEIDKFAQQTYLANFGEYPKG-DITKISA 139
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIP+HDVLLAGFPCQ FSQAG
Sbjct: 140 SDIPNHDVLLAGFPCQAFSQAG 161
>gi|183217290|gb|ACC59209.1| methyltransferase [Streptococcus pneumoniae]
gi|321156848|emb|CBW38835.1| putative DNA methylase [Streptococcus pneumoniae]
Length = 452
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
++ DLF GIGG RL +E EC EI+ ++ + F DI +
Sbjct: 1 MRFIDLFSGIGGFRLGME----SVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 56
Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83
+ DV+ GFPCQ FS AG
Sbjct: 57 SDDEFKKLRGKVDVICGGFPCQAFSIAG 84
>gi|315150308|gb|EFT94324.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX0012]
Length = 334
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56
++ DLF GIGG RL +E +H C EI+ Y+ K+YQA +
Sbjct: 1 MEFLDLFAGIGGFRLGMEMAGHH----CIGFCEIDKYARKSYQAIHQTKGEIELHDITSV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I D+L GFPCQ FS AG
Sbjct: 57 SNEFIRSIGHTDILCGGFPCQAFSIAG 83
>gi|332523411|ref|ZP_08399663.1| modification methylase HpaII [Streptococcus porcinus str.
Jelinkova 176]
gi|332314675|gb|EGJ27660.1| modification methylase HpaII [Streptococcus porcinus str.
Jelinkova 176]
Length = 451
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL L + EC EI+ ++ K+Y + F DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGLT----RQGHECIGFCEIDKFARKSYKAIYKTEGEIEFHDIRQV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
QD D++ GFPCQ FS AG
Sbjct: 57 TDQDFRQLRGQVDIICGGFPCQAFSLAG 84
>gi|312863775|ref|ZP_07724013.1| DNA (cytosine-5-)-methyltransferase [Streptococcus vestibularis
F0396]
gi|311101311|gb|EFQ59516.1| DNA (cytosine-5-)-methyltransferase [Streptococcus vestibularis
F0396]
Length = 454
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL L + EC EI+ ++ K+Y + F DI ++
Sbjct: 4 MKFLDLFAGIGGFRLGLT----RQGHECIGFCEIDKFARKSYKAIYKTEGEIEFHDIRQV 59
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
QD D++ GFPCQ FS AG
Sbjct: 60 TDQDFRQLRGQVDIICGGFPCQAFSLAG 87
>gi|325913633|ref|ZP_08175995.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B]
gi|325476992|gb|EGC80142.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B]
Length = 372
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/82 (53%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K DLF GIGGIRL E + +N EC +SSE + Y+ KTYQANF DI K+
Sbjct: 56 IKFIDLFAGIGGIRLGFE--GDSKNTECVYSSEWDKYAQKTYQANFGVMPDG-DITKVSA 112
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP+ +VLLAGFPCQPFS G
Sbjct: 113 SSIPNFNVLLAGFPCQPFSSIG 134
>gi|225571452|ref|ZP_03780448.1| hypothetical protein CLOHYLEM_07550 [Clostridium hylemonae DSM
15053]
gi|225159928|gb|EEG72547.1| hypothetical protein CLOHYLEM_07550 [Clostridium hylemonae DSM
15053]
Length = 377
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
++ DLFCGIGG R + F+ + +C FSS+I+ Y+ +Y+ANF + DI KI
Sbjct: 74 IRYIDLFCGIGGFRYASQYAFDKLDLEGKCVFSSDIDKYAQVSYEANFGERPMG-DITKI 132
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +IPD D+L GFPCQ FS G
Sbjct: 133 EASEIPDFDILFGGFPCQAFSICG 156
>gi|327198092|ref|YP_004306459.1| gp47 [Burkholderia phage KL3]
gi|310657226|gb|ADP02340.1| gp47 [Burkholderia phage KL3]
Length = 422
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/83 (51%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60
+ DLF GIGGIRL E EC F+SE N +S KTY NF + F DI
Sbjct: 70 FRFIDLFAGIGGIRLGFE----AHGGECVFTSEWNDFSKKTYVDNFGDHHPFIGDIVPFA 125
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ +P HDVLLAGFPCQPFS AG
Sbjct: 126 AESVPTHDVLLAGFPCQPFSIAG 148
>gi|217980150|ref|YP_002364200.1| DNA-cytosine methyltransferase [Thauera sp. MZ1T]
gi|217508321|gb|ACK55106.1| DNA-cytosine methyltransferase [Thauera sp. MZ1T]
Length = 419
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/83 (54%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
DLF G+GGIR+ E C F+SE + Y+ KTY NFP GDI KI+
Sbjct: 66 FTFIDLFAGVGGIRMGFE----AHGGRCVFTSEWDSYAQKTYAENFPAEHPLNGDITKIE 121
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPDHDVLLAGFPCQPFS AG
Sbjct: 122 AADIPDHDVLLAGFPCQPFSIAG 144
>gi|20530828|gb|AAM27270.1|AF507962_1 methyl transferase [Lactococcus lactis]
Length = 185
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL LEQ EC EI+ ++ ++Y N + DI +
Sbjct: 1 MKFLDLFAGIGGFRLGLEQA----GHECVGFCEIDKFARQSYKAIHNTEGEREYHDITTV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
++ +++ GFPCQ FS AG
Sbjct: 57 SNEEWRTLRGTVELICGGFPCQSFSIAG 84
>gi|332361999|gb|EGJ39801.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
sanguinis SK49]
Length = 480
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
+K DLF GIGG RL +E EC EI+ ++ + F DI +
Sbjct: 29 MKFIDLFSGIGGFRLGME----SVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 84
Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83
+ D++ GFPCQ FS AG
Sbjct: 85 SDDEFKKLRGKVDIICGGFPCQAFSIAG 112
>gi|194396841|ref|YP_002037999.1| Tn5253 C-5 cytosine-specific DNA methylase [Streptococcus
pneumoniae G54]
gi|194356508|gb|ACF54956.1| Tn5253 C-5 cytosine-specific DNA methylase [Streptococcus
pneumoniae G54]
Length = 452
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
++ DLF GIGG RL +E EC EI+ ++ + F DI +
Sbjct: 1 MRFIDLFSGIGGFRLGME----SVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 56
Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83
+ D++ GFPCQ FS AG
Sbjct: 57 SDDEFKKLRGKVDIICGGFPCQAFSIAG 84
>gi|182684309|ref|YP_001836056.1| type II DNA modification methyltransferase Spn5252IP
[Streptococcus pneumoniae CGSP14]
gi|221232093|ref|YP_002511246.1| DNA methylase [Streptococcus pneumoniae ATCC 700669]
gi|182629643|gb|ACB90591.1| type II DNA modification methyltransferase Spn5252IP
[Streptococcus pneumoniae CGSP14]
gi|220674554|emb|CAR69117.1| putative DNA methylase [Streptococcus pneumoniae ATCC 700669]
Length = 452
Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
++ DLF GIGG RL +E EC EI+ ++ + F DI +
Sbjct: 1 MRFIDLFSGIGGFRLGME----SVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 56
Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83
+ D++ GFPCQ FS AG
Sbjct: 57 SDDEFKKLRGKVDIICGGFPCQAFSIAG 84
>gi|4063721|gb|AAC98421.1| methyl transferase [Streptococcus pneumoniae]
Length = 452
Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
++ DLF GIGG RL +E EC EI+ ++ + F DI +
Sbjct: 1 MRFIDLFSGIGGFRLGME----SVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 56
Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83
+ DV+ GFPCQ FS AG
Sbjct: 57 SDDEFKKLRGKVDVICGGFPCQAFSIAG 84
>gi|53804329|ref|YP_114062.1| C-5 cytosine-specific DNA methylase family protein [Methylococcus
capsulatus str. Bath]
gi|53758090|gb|AAU92381.1| C-5 cytosine-specific DNA methylase family protein [Methylococcus
capsulatus str. Bath]
Length = 345
Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
+ LF G GG+ L F +++EIN + +TY+ N + + G
Sbjct: 42 FSVISLFSGCGGMDLGFRGGFEFLGKRYAKLPFNVIWANEINEAACQTYRRNLGSHIHHG 101
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI ++ P+ DV++ GFPCQ S G
Sbjct: 102 DIWQMMDSLPPEADVVIGGFPCQDISVNG 130
>gi|326571776|gb|EGE21785.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC7]
Length = 458
Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGGIRL E C FSSE + ++ +TYQ + + FGDI +I
Sbjct: 120 FKFIDLFAGIGGIRLGAE----RNGGLCVFSSEFDKFAQQTYQ-LNHHEMPFGDITQIDA 174
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++P HD+LLAGFPCQPFS +G
Sbjct: 175 NNLPSHDLLLAGFPCQPFSYSG 196
>gi|307244197|ref|ZP_07526312.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus stomatis
DSM 17678]
gi|306492347|gb|EFM64385.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus stomatis
DSM 17678]
Length = 534
Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ LF G GG+ L +Q E ++++ + + + Y+ NF I + +
Sbjct: 197 KLVSLFSGCGGMDLGFKQA----GYEIVYANDFDSDAQRVYEKNFGEIDKR-SILDVDEK 251
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+IPD D+L AGFPCQPFS AG
Sbjct: 252 EIPDCDILTAGFPCQPFSNAG 272
>gi|159026805|emb|CAO86650.1| ngoBIM [Microcystis aeruginosa PCC 7806]
Length = 331
Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
++ DLF G+GG RL +EQ +N+E C FS +I+ + Y ANF + DI +I
Sbjct: 10 IRFIDLFSGLGGFRLAIEQVCRPKNLESDCVFSCDIDKDAQAIYHANFGDQPRG-DITEI 68
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
DIP+HD+L+AGFPCQPFS G
Sbjct: 69 AALDIPNHDILMAGFPCQPFSICG 92
>gi|118138268|pdb|2I9K|A Chain A, Engineered Extrahelical Base Destabilization Enhances
Sequence Discrimination Of Dna Methyltransferase M.Hhai
Length = 327
Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF DI ++
Sbjct: 12 LRFIDLFAGLGGFRLALE----SCGAECVYSNEWDKYAQEVYEMNFGEKPEG-DITQVNE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ IPDHD+L AGFPCQ FS +G
Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88
>gi|319744417|gb|EFV96775.1| type II DNA modification methyltransferase Spn5252IP
[Streptococcus agalactiae ATCC 13813]
Length = 450
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL L + EC EI+ ++ K+Y + F DI ++
Sbjct: 4 MKFLDLFAGIGGFRLGLT----RQGHECIGFCEIDKFARKSYKAIYETKGEIEFHDIRQV 59
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
+D D++ GFPCQ FS AG
Sbjct: 60 TDEDFRQLRGQVDIICGGFPCQAFSLAG 87
>gi|157414453|ref|YP_001481709.1| hypothetical protein C8J_0133 [Campylobacter jejuni subsp. jejuni
81116]
gi|283955585|ref|ZP_06373079.1| hypothetical protein C1336_000030018 [Campylobacter jejuni subsp.
jejuni 1336]
gi|157385417|gb|ABV51732.1| hypothetical protein C8J_0133 [Campylobacter jejuni subsp. jejuni
81116]
gi|283792928|gb|EFC31703.1| hypothetical protein C1336_000030018 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 321
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK DLF GIGGIR+ + F +E FSSEI+ ++ +TY NF DI +I
Sbjct: 8 LKAIDLFAGIGGIRIGFKNIFQE-KLEFVFSSEIDKFACQTYFCNFNELPHG-DITQINE 65
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+IP H++LLAGFPCQ FS AG
Sbjct: 66 NNIPKHNILLAGFPCQAFSIAG 87
>gi|322385307|ref|ZP_08058952.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
cristatus ATCC 51100]
gi|321270566|gb|EFX53481.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
cristatus ATCC 51100]
Length = 480
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
++ DLF GIGG RL +E EC EI+ ++ + F DI +
Sbjct: 29 MRFIDLFSGIGGFRLGME----SVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 84
Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83
+ DV+ GFPCQ FS AG
Sbjct: 85 SDDEFKKLRGKVDVICGGFPCQAFSIAG 112
>gi|322376648|ref|ZP_08051141.1| type II DNA modification methyltransferase Spn5252IP
[Streptococcus sp. M334]
gi|321282455|gb|EFX59462.1| type II DNA modification methyltransferase Spn5252IP
[Streptococcus sp. M334]
Length = 452
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
++ DLF GIGG RL +E EC EI+ ++ + F DI +
Sbjct: 1 MRFIDLFSGIGGFRLGME----SVGHECIGFCEIDKFARKSYKSIFQTEGEIEFHDIRDV 56
Query: 60 KTQDIP----DHDVLLAGFPCQPFSQAG 83
+ DV+ GFPCQ FS AG
Sbjct: 57 SDDEFKKLRGKVDVVCGGFPCQAFSIAG 84
>gi|325989685|ref|YP_004249384.1| cytosine-specific methyltransferase [Mycoplasma suis KI3806]
gi|323574770|emb|CBZ40430.1| Cytosine-specific methyltransferase [Mycoplasma suis]
Length = 326
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K+ DLF GIGG RL T V+ FSSEI+ ++ +TY++NF + + DI +I +
Sbjct: 19 YKMIDLFAGIGGTRLGFHLTGE---VKVVFSSEIDKFAKQTYKSNFSDEPLG-DIREINS 74
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIP+HD+L+AGFPCQ FSQAG
Sbjct: 75 EDIPNHDILVAGFPCQAFSQAG 96
>gi|158320884|ref|YP_001513391.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs]
gi|158141083|gb|ABW19395.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs]
Length = 329
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF G GG+ L E+ + ++E + +TY+ N LI GDI +I +
Sbjct: 1 MKLISLFSGAGGMDLGFEKA----GFKVIAANEYDKTIWETYEKNHNAPLIKGDIREIAS 56
Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83
D P D D ++ G PCQ +S+AG
Sbjct: 57 GDFPDDCDGIIGGPPCQSWSEAG 79
>gi|17863973|gb|AAL46998.1|AF448250_2 putative C-5 cytosine-specific DNA methylase [Bacteroides coprosuis
DSM 18011]
Length = 401
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/82 (56%), Positives = 55/82 (67%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGGIRL + EC FSSEI+ ++ KTY +N+ + DI KIK
Sbjct: 74 FKFIDLFAGIGGIRLPFQ----LNGGECVFSSEIDYHAQKTYYSNYGDYPSG-DITKIKA 128
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIPDHD+LLAGFPCQ FSQAG
Sbjct: 129 EDIPDHDILLAGFPCQAFSQAG 150
>gi|322383485|ref|ZP_08057261.1| hypothetical protein PL1_3347 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321152224|gb|EFX45054.1| hypothetical protein PL1_3347 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 425
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKI 59
M +LF GIGG R L+Q C F+SEI+ ++ +Y+ + GDI KI
Sbjct: 1 MFTYVELFAGIGGFRSALDQ----LGGICTFASEIDKFATISYRAMYDGAPELHGDITKI 56
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+D+P+HD+L+ GFPCQ FS AG
Sbjct: 57 DAKDVPEHDLLVGGFPCQAFSVAG 80
>gi|315931535|gb|EFV10502.1| DNA (cytosine-5) methyltransferase [Campylobacter jejuni subsp.
jejuni 327]
Length = 284
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK DLF GIGGIR+ + F +E FSSEI+ ++ +TY NF DI +I
Sbjct: 8 LKAIDLFAGIGGIRIGFKNIFQE-KLEFVFSSEIDKFACQTYFCNFNELPHG-DITQINE 65
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+IP H++LLAGFPCQ FS AG
Sbjct: 66 NNIPKHNILLAGFPCQAFSIAG 87
>gi|167465361|ref|ZP_02330450.1| DNA-cytosine methyltransferase [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 432
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKI 59
M +LF GIGG R L+Q C F+SEI+ ++ +Y+ + GDI KI
Sbjct: 1 MFTYVELFAGIGGFRSALDQ----LGGICTFASEIDKFATISYRAMYDGAPELCGDITKI 56
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D+PDHD+L+ GFPCQ FS AG
Sbjct: 57 DASDVPDHDLLVGGFPCQAFSVAG 80
>gi|260890952|ref|ZP_05902215.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254]
gi|260859505|gb|EEX74005.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254]
Length = 452
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ LF G GG+ L + + E ++++ +V+TY+ N N ++ GDI I ++
Sbjct: 10 KVISLFSGAGGMDLGIIKA----GFEVIWANDFEKDAVETYRRNIGNHIVLGDITMISSK 65
Query: 63 DIP----DHDVLLAGFPCQPFSQA 82
+IP + D+++ GFPCQ FS A
Sbjct: 66 EIPLKKGEVDLIIGGFPCQGFSIA 89
>gi|229187780|ref|ZP_04314910.1| Cytosine-specific methyltransferase [Bacillus cereus BGSC 6E1]
gi|228595683|gb|EEK53373.1| Cytosine-specific methyltransferase [Bacillus cereus BGSC 6E1]
Length = 365
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
L DLF GIGG RL +E +C EI+ ++ K+Y N DI +
Sbjct: 3 LTFIDLFAGIGGFRLGMEAA----GHKCLGYVEIDKFARKSYEAIHNTKGEWTAHDITTV 58
Query: 60 KTQD----IPDHDVLLAGFPCQPFSQAG 83
D DV+ GFPCQ FS AG
Sbjct: 59 TNDDLRLLRGTVDVICGGFPCQAFSIAG 86
>gi|30089875|ref|NP_839905.1| putative methylase [Lactococcus phage P335 sensu lato]
gi|21954664|gb|AAM83053.1|AF489521_14 putative methylase [Lactococcus phage 4268]
Length = 185
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL LEQ EC EI+ ++ ++Y N + DI +
Sbjct: 1 MKFLDLFAGIGGFRLGLEQA----GHECVGFCEIDKFARQSYKAIHNTEGEREYHDITTV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
++ +++ GFPCQ FS AG
Sbjct: 57 SNEEWRTLRGTVELICGGFPCQAFSIAG 84
>gi|319779706|ref|YP_004130619.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9]
gi|317109730|gb|ADU92476.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9]
Length = 329
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L DLF GIGG R+ L+ +C FSSE + ++ K N + DI KI
Sbjct: 12 LTFIDLFAGIGGFRVALQ----SLGAKCVFSSEWDKFA-KETYWLNFNEIAHDDITKIDE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP+HD+L AGFPCQ FS +G
Sbjct: 67 CTIPNHDILCAGFPCQAFSISG 88
>gi|127455|sp|P05102|MTH1_HAEPH RecName: Full=Modification methylase HhaI; Short=M.HhaI; AltName:
Full=Cytosine-specific methyltransferase HhaI
gi|1065144|pdb|1MHT|A Chain A, Covalent Ternary Structure Of Hhai Methyltransferase,
Dna And S-Adenosyl-L-Homocysteine
gi|1942412|pdb|3MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With
Unmodified Dna And Adohcy
gi|1942415|pdb|4MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Native
Dna And Adohcy
gi|2392799|pdb|5MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With
Hemimethylated Dna And Adohcy
gi|3660437|pdb|6MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Adohcy
And Dna Containing 4'-Thio-2'deoxycytidine At The
Target
gi|4139672|pdb|7MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX
gi|4139675|pdb|8MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX
gi|4139680|pdb|9MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX
gi|4558252|pdb|10MH|A Chain A, Ternary Structure Of Hhai Methyltransferase With Adohcy
And Hemimethylated Dna Containing
5,6-Dihydro-5-Azacytosine At The Target
gi|4699814|pdb|2HMY|B Chain B, Binary Complex Of Hhai Methyltransferase With Adomet
Formed In The Presence Of A Short Nonpsecific Dna
Oligonucleotide
gi|24158912|pdb|1M0E|A Chain A, Zebularine: A Novel Dna Methylation Inhibitor That Forms
A Covalent Complex With Dna Methyltransferase
gi|52695513|pdb|1SKM|A Chain A, Hhai Methyltransferase In Complex With Dna Containing An
Abasic South Carbocyclic Sugar At Its Target Site
gi|85544385|pdb|2C7O|A Chain A, Hhai Dna Methyltransferase Complex With 13mer
Oligonucleotide Containing 2-Aminopurine Adjacent To
The Target Base (Pcgc:gmgc) And Sah
gi|85544388|pdb|2C7P|A Chain A, Hhai Dna Methyltransferase Complex With Oligonucleotide
Containing 2-Aminopurine Opposite To The Target Base (
Gcgc:gmpc) And Sah
gi|85544391|pdb|2C7Q|A Chain A, Hhai Dna Methyltransferase Complex With Oligonucleotide
Containing 2-Aminopurine Outside The Recognition
Sequence (Paired With G) And Sah
gi|116667789|pdb|2HR1|A Chain A, Ternary Structure Of Wt M.Hhai C5-Cytosine Dna
Methyltransferase With Unmodified Dna And Adohcy
gi|157831356|pdb|1HMY|A Chain A, Crystal Structure Of The Hhal Dna Methyltransferase
Complexed With S-Adenosyl-L-Methionine
gi|290560089|pdb|3EEO|A Chain A, M. Hhai Co-Crystallized With Synthetic Dsdna Containing
A Propane Diol In Place Of The Deoxycytidine Residue
Targeted For Methylation.
gi|148949|gb|AAA24989.1| DNA methylase [Haemophilus haemolyticus]
Length = 327
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF DI ++
Sbjct: 12 LRFIDLFAGLGGFRLALE----SCGAECVYSNEWDKYAQEVYEMNFGEKPEG-DITQVNE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ IPDHD+L AGFPCQ FS +G
Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88
>gi|161761159|pdb|2ZCJ|A Chain A, Ternary Structure Of The Glu119gln M.Hhai, C5-Cytosine
Dna Methyltransferase, With Unmodified Dna And Adohcy
Length = 327
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF DI ++
Sbjct: 12 LRFIDLFAGLGGFRLALE----SCGAECVYSNEWDKYAQEVYEMNFGEKPEG-DITQVNE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ IPDHD+L AGFPCQ FS +G
Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88
>gi|293568986|ref|ZP_06680299.1| methyl transferase [Enterococcus faecium E1071]
gi|291588419|gb|EFF20254.1| methyl transferase [Enterococcus faecium E1071]
Length = 380
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
++ DLF GIGG RL +EQ +C EI+ ++ ++Y+A +
Sbjct: 1 MRFLDLFAGIGGFRLGMEQA----GHQCIGFCEIDEFARRSYKAIHDTRKEVEMHDITRV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q + DVL GFPCQ FS AG
Sbjct: 57 SDEFVQSLGPVDVLCGGFPCQAFSIAG 83
>gi|189339547|pdb|2UZ4|A Chain A, Hhai Dna Methyltransferase R165n Mutant Complex With
13mer Gcgc-Gmgc Oligonucleotide And Sah
Length = 327
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF DI ++
Sbjct: 12 LRFIDLFAGLGGFRLALE----SCGAECVYSNEWDKYAQEVYEMNFGEKPEG-DITQVNE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ IPDHD+L AGFPCQ FS +G
Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88
>gi|189096047|pdb|2UYC|A Chain A, Hhai Dna Methyltransferase R163n Mutant Complex With
13mer Gcgc-Gmgc Oligonucleotide And Sah
Length = 327
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF DI ++
Sbjct: 12 LRFIDLFAGLGGFRLALE----SCGAECVYSNEWDKYAQEVYEMNFGEKPEG-DITQVNE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ IPDHD+L AGFPCQ FS +G
Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88
>gi|254409526|ref|ZP_05023307.1| DNA-cytosine methyltransferase superfamily [Microcoleus
chthonoplastes PCC 7420]
gi|196183523|gb|EDX78506.1| DNA-cytosine methyltransferase superfamily [Microcoleus
chthonoplastes PCC 7420]
Length = 437
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
++ DLF GIGGIRL EQ N N EC +SEI+P Y+ NF + GDI KI
Sbjct: 4 IRFIDLFAGIGGIRLAFEQAANTLNYKTECVLASEISPDCQWVYKNNFN-HEVLGDIRKI 62
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+P HDVLLAGFPCQ FS AG
Sbjct: 63 --NQLPPHDVLLAGFPCQSFSYAG 84
>gi|256819720|ref|YP_003140999.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271]
gi|256581303|gb|ACU92438.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271]
Length = 389
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ DLF GIGG L ++ H + SEI+ +++ Y+ NFPN GDI +
Sbjct: 1 MKLIDLFSGIGGFSLGFQRAGYH--FTEHYFSEIDKHAIANYKNNFPNAKYIGDITTLHG 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D D++ G PCQ FS AG
Sbjct: 59 GDFTGIDIITFGSPCQDFSLAG 80
>gi|212710423|ref|ZP_03318551.1| hypothetical protein PROVALCAL_01485 [Providencia alcalifaciens
DSM 30120]
gi|212686843|gb|EEB46371.1| hypothetical protein PROVALCAL_01485 [Providencia alcalifaciens
DSM 30120]
Length = 330
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61
+I F G GG+ L EQ +++E + TY+ N P+T I I +
Sbjct: 4 RIVSFFAGAGGLDLGFEQA----GFNVIWANEFDKDIWATYKKNHPHTELDQRSITNITS 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++P+ D ++ G PCQ +S+AG
Sbjct: 60 DEVPECDGIIGGPPCQSWSEAG 81
>gi|157827820|ref|YP_001496884.1| site-specific DNA methylase [Rickettsia bellii OSU 85-389]
gi|157803124|gb|ABV79847.1| Site-specific DNA methylase [Rickettsia bellii OSU 85-389]
Length = 165
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K DLFCGIGG R LE +N+EC FSS+I+ + Y+ NF + DI +I
Sbjct: 1 MYKFIDLFCGIGGFRKALE----SKNLECVFSSDIDKDVQEAYKRNFGDKPHG-DITEIP 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
IP HD+L AGFPCQ FS +G
Sbjct: 56 ANKIPKHDILCAGFPCQSFSISG 78
>gi|160877870|pdb|2Z6U|A Chain A, Ternary Structure Of The Glu119ala M.Hhai, C5-Cytosine
Dna Methyltransferase, With Unmodified Dna And Adohcy
Length = 327
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF DI ++
Sbjct: 12 LRFIDLFAGLGGFRLALE----SCGAECVYSNEWDKYAQEVYEMNFGEKPEG-DITQVNE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ IPDHD+L AGFPCQ FS +G
Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88
>gi|158431504|pdb|2Z6Q|A Chain A, Ternary Structure Of Arg165ala M.Hhai C5-Cytosine Dna
Methyltransferase With Unmodified Dna And Adohcy
Length = 327
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF DI ++
Sbjct: 12 LRFIDLFAGLGGFRLALE----SCGAECVYSNEWDKYAQEVYEMNFGEKPEG-DITQVNE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ IPDHD+L AGFPCQ FS +G
Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88
>gi|154504826|ref|ZP_02041564.1| hypothetical protein RUMGNA_02336 [Ruminococcus gnavus ATCC
29149]
gi|153794709|gb|EDN77129.1| hypothetical protein RUMGNA_02336 [Ruminococcus gnavus ATCC
29149]
Length = 422
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
+ DL GIGG RL LE +C E + ++ + D+ K+
Sbjct: 4 MTFLDLCSGIGGFRLGLETA----GHKCIGYCEYDKFARASYEAMYDTEGEWKAHDVTKL 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K +D+P D+ GFPCQ S AG
Sbjct: 60 KPEDVPYADIWCFGFPCQDISVAG 83
>gi|256822924|ref|YP_003146887.1| DNA-cytosine methyltransferase [Kangiella koreensis DSM 16069]
gi|256796463|gb|ACV27119.1| DNA-cytosine methyltransferase [Kangiella koreensis DSM 16069]
Length = 419
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGGIRL + C FSSE + + FGDI + +
Sbjct: 97 FTFIDLFAGIGGIRLGFQ----KYGGACVFSSEFEK-AAQNTYKENFGEHPFGDITTVPS 151
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++IP HD+LL GFPCQ FS AG
Sbjct: 152 ENIPKHDILLGGFPCQAFSVAG 173
>gi|265751236|ref|ZP_06087299.1| DcmB protein [Bacteroides sp. 3_1_33FAA]
gi|270294601|ref|ZP_06200803.1| DNA-cytosine methyltransferase [Bacteroides sp. D20]
gi|263238132|gb|EEZ23582.1| DcmB protein [Bacteroides sp. 3_1_33FAA]
gi|270276068|gb|EFA21928.1| DNA-cytosine methyltransferase [Bacteroides sp. D20]
Length = 466
Score = 87.3 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+K+ F G GG+ L EQ E +++E + KTYQ N PNT DI K+K
Sbjct: 1 MKVASFFAGCGGLDLGFEQA----GYEVVWANEFDEAIHKTYQFNHPNTYLCKSDIRKLK 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+DIPD D + G PCQ +S+ G
Sbjct: 57 GEDIPDCDGFIGGPPCQSWSEGG 79
>gi|12084381|pdb|1FJX|A Chain A, Structure Of Ternary Complex Of Hhai Methyltransferase
Mutant (T250g) In Complex With Dna And Adohcy
gi|85544394|pdb|2C7R|A Chain A, Hhai Dna Methyltransferase (T250g Mutant) Complex With
Oligonucleotide Containing 2-Aminopurine As A Target
Base (Gpgc:gmgc) And Sah
Length = 327
Score = 87.3 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF DI ++
Sbjct: 12 LRFIDLFAGLGGFRLALE----SCGAECVYSNEWDKYAQEVYEMNFGEKPEG-DITQVNE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ IPDHD+L AGFPCQ FS +G
Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88
>gi|308185227|ref|YP_003929360.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SJM180]
gi|308061147|gb|ADO03043.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SJM180]
Length = 317
Score = 87.3 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI LF GIGG+ L E ++++ + ++V+TY+AN +I GDI I+
Sbjct: 1 MKIASLFSGIGGLDLGF----IQNGFEIVWANDFDKHAVETYKANIGQNIILGDIE-IEK 55
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
I HD+L+ GFPCQPFS G
Sbjct: 56 DHICGHDILIGGFPCQPFSTLG 77
>gi|227485932|ref|ZP_03916248.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus
ATCC 51172]
gi|227235977|gb|EEI85992.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus
ATCC 51172]
Length = 358
Score = 87.3 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI LF G+GG L + + F+SEI+ ++ K+Y +NF ++GDI KI
Sbjct: 5 IKIASLFSGVGGFEEGLRLA--KIDFDLVFASEIDRFAQKSYSSNFDTDNLYGDITKINE 62
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++IPDHD+LLAGFPCQ FS AG
Sbjct: 63 KNIPDHDLLLAGFPCQSFSIAG 84
>gi|149373126|ref|ZP_01892014.1| DcmB [unidentified eubacterium SCB49]
gi|149354274|gb|EDM42843.1| DcmB [unidentified eubacterium SCB49]
Length = 349
Score = 87.3 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+KI F G GG+ L +Q +++E + +TY+ N PNT+ I I
Sbjct: 1 MKIVSFFAGAGGLDLGFQQA----GFNVIWANEYDKEIWETYEKNHPNTILDKRSIVNIP 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
++P+ D ++ G PCQ +S+AG
Sbjct: 57 ADEVPECDGIIGGPPCQSWSEAG 79
>gi|225863800|ref|YP_002749178.1| cytosine-specific methyltransferase NlaX [Bacillus cereus
03BB102]
gi|225788166|gb|ACO28383.1| cytosine-specific methyltransferase NlaX [Bacillus cereus
03BB102]
Length = 576
Score = 86.9 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+ DLF GIGG RL +EQ +C E + ++ K+Y N DI +
Sbjct: 1 MNFIDLFAGIGGFRLGMEQA----GHKCLGYVEKDKFARKSYEAIHNTKGEWTAHDITAV 56
Query: 60 KTQD----IPDHDVLLAGFPCQPFSQAG 83
D DV+ GFPCQ FS AG
Sbjct: 57 TNDDLRLLRGQVDVICGGFPCQAFSIAG 84
>gi|127464|sp|P11408|MTM1_MORSP RecName: Full=Modification methylase MspI; Short=M.MspI; AltName:
Full=Cytosine-specific methyltransferase MspI
gi|44539|emb|CAA32393.1| unnamed protein product [Moraxella sp.]
Length = 418
Score = 86.9 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGGIR E +C FSSEI+P++ TY NF DI K++
Sbjct: 105 FKFIDLFSGIGGIRQSFEV----NGGKCVFSSEIDPFAKFTYYTNFGVVPFG-DITKVEA 159
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP HD+L AGFPCQPFS G
Sbjct: 160 TTIPQHDILCAGFPCQPFSHIG 181
>gi|309808410|ref|ZP_07702309.1| putative modification methylase HhaI [Lactobacillus iners LactinV
01V1-a]
gi|308168238|gb|EFO70357.1| putative modification methylase HhaI [Lactobacillus iners LactinV
01V1-a]
Length = 198
Score = 86.9 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL LE +C +S+E + ++ +TY NF +T DI ++
Sbjct: 12 YKFIDLFAGIGGFRLALE----SFGAKCVYSNEWDKFAQETYHMNFGDTPEG-DITQVDE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L AGFPCQPFS +G
Sbjct: 67 TRIPDHDILCAGFPCQPFSISG 88
>gi|325973250|ref|YP_004250314.1| cytosine-specific DNA modification methylase, HpaII-like protein
[Mycoplasma suis str. Illinois]
gi|323651852|gb|ADX97934.1| cytosine-specific DNA modification methylase, HpaII-like protein
[Mycoplasma suis str. Illinois]
Length = 326
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ DLF GIGG RL T V+ FSSEI+ ++ KTY++NF + + DI +I +
Sbjct: 19 YRMIDLFAGIGGTRLGFHLTGE---VKVVFSSEIDKFAKKTYKSNFSDEPLG-DIREINS 74
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIP+HD+L+AGFPCQ FSQAG
Sbjct: 75 EDIPNHDILVAGFPCQAFSQAG 96
>gi|462657|sp|P34877|MTSA_LACLC RecName: Full=Modification methylase ScrFIA; Short=M.ScrFI-A;
Short=M.ScrFIA; AltName: Full=Cytosine-specific
methyltransferase ScrFIA
gi|149493|gb|AAA25220.1| SCRFI methylase [Lactococcus lactis]
gi|2327034|gb|AAB66696.1| 5-methyl-cytosine methyltransferase [Lactococcus lactis subsp.
cremoris]
Length = 389
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K+ DLF GIGG RL QT V+ FSSEI+ +++KTY+ANF + DI KI
Sbjct: 79 YKMIDLFAGIGGTRLGFHQT---EKVKSVFSSEIDKFAIKTYKANFGDEPHG-DITKIDE 134
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIPDHD+L+ GFPCQ FSQAG
Sbjct: 135 KDIPDHDILVGGFPCQAFSQAG 156
>gi|50513617|pdb|1SVU|A Chain A, Structure Of The Q237w Mutant Of Hhai Dna
Methyltransferase: An Insight Into Protein-Protein
Interactions
gi|50513618|pdb|1SVU|B Chain B, Structure Of The Q237w Mutant Of Hhai Dna
Methyltransferase: An Insight Into Protein-Protein
Interactions
Length = 327
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF DI ++
Sbjct: 12 LRFIDLFAGLGGFRLALE----SCGAECVYSNEWDKYAQEVYEMNFGEKPEG-DITQVNE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ IPDHD+L AGFPCQ FS +G
Sbjct: 67 KTIPDHDILCAGFPCQAFSISG 88
>gi|323525262|ref|YP_004227415.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1001]
gi|323382264|gb|ADX54355.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1001]
Length = 428
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E C F+SE N +S KTYQ N + GDI
Sbjct: 73 FRFIDLFAGIGGIRRGFE----AHGGRCVFTSEWNEFSKKTYQQNHRDADGTHQFVGDIV 128
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+P HDVLLAGFPCQPFS AG
Sbjct: 129 SFAENDVPAHDVLLAGFPCQPFSIAG 154
>gi|317056067|ref|YP_004104534.1| DNA-cytosine methyltransferase [Ruminococcus albus 7]
gi|315448336|gb|ADU21900.1| DNA-cytosine methyltransferase [Ruminococcus albus 7]
Length = 425
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAK 58
M+K D+F GIGG R LE+ EC E + ++ + Y+ + L F D K
Sbjct: 1 MIKFFDIFAGIGGFRSGLEKVG---GFECVGYCECDKFAKQAYEALYDTRKELYFDDARK 57
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
I +++PD D++ GFPCQ FS AG
Sbjct: 58 IDPEELPDIDLICGGFPCQSFSIAG 82
>gi|967022|emb|CAA62381.1| DNA (cytosine-5-)-methyltransferase [Geobacillus
stearothermophilus]
gi|1262297|gb|AAA96793.1| m5C-multispecific methyltransferase [Geobacillus
stearothermophilus]
gi|1589631|prf||2211376A cytosine-C5-DNA methyltransferase
Length = 534
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + +LF G G + + L ++++ + + Y+ N + ++ GDI I
Sbjct: 14 LTVAELFAGGGLMAVGLRAA----GYNLVWANDFDKSACAAYRHNLGDHIVHGDITAIDP 69
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIPD DV+ G PCQ +S AG
Sbjct: 70 ADIPDTDVIAGGPPCQDYSVAG 91
>gi|331084584|ref|ZP_08333682.1| hypothetical protein HMPREF0992_02606 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400654|gb|EGG80261.1| hypothetical protein HMPREF0992_02606 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 324
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K F G+GGI E T + +++EI+ Y +T++ NF + DI ++K
Sbjct: 1 MFKCASFFAGVGGIDYGFESTGV---FKTVYANEIDSYPAQTFELNFDVKVDVRDIHEVK 57
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+++IPD D++LAGFPCQ FS AG
Sbjct: 58 SEEIPDFDIMLAGFPCQAFSIAG 80
>gi|260554958|ref|ZP_05827179.1| DNA-methyltransferase MKpn2kI [Acinetobacter baumannii ATCC 19606]
gi|260411500|gb|EEX04797.1| DNA-methyltransferase MKpn2kI [Acinetobacter baumannii ATCC 19606]
Length = 413
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 43/82 (52%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGGIRL +Q +C FSSE + ++ KTY ANF DI +I+
Sbjct: 59 FTFIDLFAGIGGIRLPFQQ----LKGKCVFSSEWDKFAQKTYAANFGELPSG-DITQIRA 113
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+LL GFPCQ FSQAG
Sbjct: 114 ADIPDHDILLGGFPCQAFSQAG 135
>gi|170691874|ref|ZP_02883038.1| DNA-cytosine methyltransferase [Burkholderia graminis C4D1M]
gi|170143158|gb|EDT11322.1| DNA-cytosine methyltransferase [Burkholderia graminis C4D1M]
Length = 438
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +S KTYQ N + GDI
Sbjct: 83 FRFIDLFAGIGGIRRGFE----AHGGQCVFTSEWNEFSKKTYQQNHRDADDAHQFVGDIV 138
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
+IP HDVLLAGFPCQPFS AG
Sbjct: 139 SFAEDEIPPHDVLLAGFPCQPFSIAG 164
>gi|283471715|emb|CAQ50926.1| modification methylase EcoRII (Cytosine-specificmethyltransferase
EcoRII) (M.EcoRII) [Staphylococcus aureus subsp. aureus
ST398]
Length = 397
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K+ DLF GIGG RL + H NV+C FSSE + +S KTY+ANF T DI +I
Sbjct: 86 YKMIDLFAGIGGTRLGFQ---LHGNVKCVFSSEWDKFSAKTYKANFGETPKG-DITQIIA 141
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+IP HD+L+AGFPCQ FSQAG
Sbjct: 142 DEIPTHDILVAGFPCQAFSQAG 163
>gi|153814253|ref|ZP_01966921.1| hypothetical protein RUMTOR_00462 [Ruminococcus torques ATCC
27756]
gi|145848649|gb|EDK25567.1| hypothetical protein RUMTOR_00462 [Ruminococcus torques ATCC
27756]
Length = 422
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
+ DL GIGG RL LE +C E + ++ + D+ K+
Sbjct: 4 MTFLDLCSGIGGFRLGLETA----GHKCIGYCEYDKFARASYEAMYDTEGEWKAHDVTKL 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K D+P D+ GFPCQ S AG
Sbjct: 60 KPGDVPYADIWCFGFPCQDISVAG 83
>gi|124024750|ref|YP_001013866.1| site-specific DNA methylase [Prochlorococcus marinus str. NATL1A]
gi|123959818|gb|ABM74601.1| Site-specific DNA methylase [Prochlorococcus marinus str. NATL1A]
Length = 305
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGGIR+ E EC FSSE + YS TY+ANF DI KI
Sbjct: 5 FRFIDLFAGIGGIRIPFE----ELGGECVFSSEWDKYSQITYEANFGEIPKG-DITKINA 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIP HD+L+ GFPCQ FSQAG
Sbjct: 60 EDIPKHDLLVGGFPCQAFSQAG 81
>gi|56461628|ref|YP_156909.1| DNA cytosine methylase [Idiomarina loihiensis L2TR]
gi|56180638|gb|AAV83360.1| DNA cytosine methylase [Idiomarina loihiensis L2TR]
Length = 419
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K DLF G+GGIRL E+ C FSSEI+ ++ TY N DI KI
Sbjct: 99 IKFIDLFAGVGGIRLAFEKAGAA----CVFSSEIDTHAQLTYFTNHGTVPYG-DITKIDA 153
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP HD+L AGFPCQPFS G
Sbjct: 154 DSIPSHDILCAGFPCQPFSHIG 175
>gi|332673536|gb|AEE70353.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 83]
Length = 434
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAK 58
+++ DLF G+GG+RL EQ + ++ C SSEI + + GDI +
Sbjct: 28 IVRFVDLFAGLGGLRLGFEQASSSIGLKSQCILSSEIKKSA-LQAYIDHFKETPQGDITQ 86
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
I T DIP+ DVLLAGFPCQPFS AG
Sbjct: 87 INTNDIPNFDVLLAGFPCQPFSNAG 111
>gi|317182001|dbj|BAJ59785.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori F57]
Length = 434
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAK 58
+++ DLF G+GG+RL EQ + ++ C SSEI + + GDI +
Sbjct: 28 IVRFVDLFAGLGGLRLGFEQASSSIGLKSQCILSSEIKKSA-LQAYTDHFKETPQGDITQ 86
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
I T DIP+ DVLLAGFPCQPFS AG
Sbjct: 87 INTNDIPNFDVLLAGFPCQPFSNAG 111
>gi|170729237|ref|YP_001763263.1| DNA-cytosine methyltransferase [Shewanella woodyi ATCC 51908]
gi|169814584|gb|ACA89168.1| DNA-cytosine methyltransferase [Shewanella woodyi ATCC 51908]
Length = 416
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG+RL +Q + C FSSE + ++ TYQ N DI I
Sbjct: 96 FKFIDLFAGIGGVRLGFQQ----NDGACVFSSEFDKHAQATYQTNHGELPFG-DITAINP 150
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHDVLLAGFPCQPFS AG
Sbjct: 151 THIPDHDVLLAGFPCQPFSHAG 172
>gi|303328045|ref|ZP_07358484.1| modification methylase MspI [Desulfovibrio sp. 3_1_syn3]
gi|302861871|gb|EFL84806.1| modification methylase MspI [Desulfovibrio sp. 3_1_syn3]
Length = 417
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M DLF G+GG L L + +C F+SEI+ Y+ NF + DI K+
Sbjct: 6 MKTFIDLFAGLGGFHLGLSRA----GYQCVFASEIDGDLASLYERNFGLRPVG-DIRKVD 60
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+P HDVL AGFPCQPFS AG
Sbjct: 61 VNHVPKHDVLCAGFPCQPFSSAG 83
>gi|187923141|ref|YP_001894783.1| DNA-cytosine methyltransferase [Burkholderia phytofirmans PsJN]
gi|187714335|gb|ACD15559.1| DNA-cytosine methyltransferase [Burkholderia phytofirmans PsJN]
Length = 426
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGGIR+ E +C F+SE N +S KTY+ N+P I I +
Sbjct: 71 FRFIDLFAGIGGIRMGFE----AHGGDCVFTSEWNDFSTKTYRENYPGGGEHALIGDIVS 126
Query: 62 Q---DIPDHDVLLAGFPCQPFSQAG 83
D+P HDVLL GFPCQPFS AG
Sbjct: 127 FPAEDVPSHDVLLGGFPCQPFSIAG 151
>gi|315608882|ref|ZP_07883855.1| modification methylase EcoRII [Prevotella buccae ATCC 33574]
gi|315249409|gb|EFU29425.1| modification methylase EcoRII [Prevotella buccae ATCC 33574]
Length = 312
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGGIRL E H C FSSE + + KTY+ANF DI KI+
Sbjct: 6 FSFIDLFAGIGGIRLGFESAGGH----CVFSSEFDENACKTYEANFGEHPSG-DITKIEA 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIPD D+LL GFPCQ FS G
Sbjct: 61 KDIPDFDILLGGFPCQAFSIIG 82
>gi|15088756|ref|NP_150145.1| putative DNA methylase [Streptococcus phage MM1]
gi|15074902|emb|CAC48079.1| putative DNA methylase [Streptococcus phage MM1]
gi|73747029|gb|AAZ82425.1| C5 methyltransferase alpha subunit [Streptococcus phage MM1 1998]
Length = 385
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56
+K DLF GIGG R+ +E EC EI+ ++ +Y+A +
Sbjct: 1 MKFLDLFAGIGGFRIGMESA----GHECIGFCEIDKFARASYKAIHDTKGEIELHDITTV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I DV+ GFPCQ FS AG
Sbjct: 57 SDDTIRGIGHVDVICGGFPCQAFSIAG 83
>gi|166367724|ref|YP_001659997.1| modification methylase NgoBI [Microcystis aeruginosa NIES-843]
gi|166090097|dbj|BAG04805.1| modification methylase NgoBI [Microcystis aeruginosa NIES-843]
Length = 330
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
++ DLFCG+GG R+ +EQ +N+E C FS +I+ + Y ANF + DI +I
Sbjct: 10 IRFVDLFCGLGGFRVAIEQVCRQKNLESDCVFSCDIDKDARSIYHANFGDQPQG-DITEI 68
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
DIP+HD+L+AGFPCQPFS G
Sbjct: 69 AALDIPNHDILMAGFPCQPFSICG 92
>gi|160894995|ref|ZP_02075769.1| hypothetical protein CLOL250_02545 [Clostridium sp. L2-50]
gi|156863426|gb|EDO56857.1| hypothetical protein CLOL250_02545 [Clostridium sp. L2-50]
Length = 447
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
++ DLF GIGG R L + C E + Y+ Y+ + D I
Sbjct: 20 IRFFDLFSGIGGFREGLHRAG---GFTCVGHCEADAYADHNYRVLFDTEGEWFCNDARNI 76
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+T+ +PD D+L AGFPCQ FS AG
Sbjct: 77 ETERMPDFDLLCAGFPCQAFSIAG 100
>gi|54297036|ref|YP_123405.1| hypothetical protein lpp1078 [Legionella pneumophila str. Paris]
gi|53750821|emb|CAH12229.1| hypothetical protein lpp1078 [Legionella pneumophila str. Paris]
Length = 320
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/82 (56%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGGIR+ + N EC FSSEI+PY KTY+ANF DI KI
Sbjct: 6 FKFIDLFAGIGGIRIPF----DKLNGECVFSSEIDPYCQKTYEANFGEKPFG-DITKISP 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
QD+PDHD+LL GFPCQ FS G
Sbjct: 61 QDVPDHDILLGGFPCQAFSIIG 82
>gi|325132717|gb|EGC55400.1| DNA-cytosine methyltransferase [Neisseria meningitidis M6190]
gi|325136737|gb|EGC59337.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579]
gi|325138603|gb|EGC61162.1| DNA-cytosine methyltransferase [Neisseria meningitidis ES14902]
gi|325142796|gb|EGC65168.1| DNA-cytosine methyltransferase [Neisseria meningitidis 961-5945]
gi|325198710|gb|ADY94166.1| DNA-cytosine methyltransferase [Neisseria meningitidis G2136]
gi|325201728|gb|ADY97182.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149]
gi|325204572|gb|ADZ00026.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240355]
gi|325208528|gb|ADZ03980.1| DNA-cytosine methyltransferase [Neisseria meningitidis NZ-05/33]
Length = 316
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
KI LF G GG+ L F N + +++EI+ ++V+TY+ N N ++ G
Sbjct: 14 YKIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHG 73
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI + + D+++ GFPCQ S G
Sbjct: 74 DIWQHLDEIPTSADIIIGGFPCQDISING 102
>gi|292486555|ref|YP_003529421.1| modification methylase [Erwinia amylovora CFBP1430]
gi|291551968|emb|CBA19005.1| modification methylase [Erwinia amylovora CFBP1430]
Length = 379
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ +F G GG+ L Q + ++++ + + TY+ N + + D+ +
Sbjct: 17 TVVSMFSGCGGMDLGFVQA----GYDVVWANDFDADACLTYKRNIGDIIHG-DVTTLDVP 71
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
D+ + DVL AGFPCQPFS AG
Sbjct: 72 DVKNLDVLTAGFPCQPFSNAG 92
>gi|292897792|ref|YP_003537161.1| cytosine-specific DNA methylase [Erwinia amylovora ATCC 49946]
gi|291197640|emb|CBJ44735.1| putative modification methylase (cytosine-specific DNA methylase)
[Erwinia amylovora ATCC 49946]
Length = 372
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ +F G GG+ L Q + ++++ + + TY+ N + + D+ +
Sbjct: 10 TVVSMFSGCGGMDLGFVQA----GYDVVWANDFDADACLTYKRNIGDIIHG-DVTTLDVP 64
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
D+ + DVL AGFPCQPFS AG
Sbjct: 65 DVKNLDVLTAGFPCQPFSNAG 85
>gi|225076231|ref|ZP_03719430.1| hypothetical protein NEIFLAOT_01268 [Neisseria flavescens
NRL30031/H210]
gi|224952355|gb|EEG33564.1| hypothetical protein NEIFLAOT_01268 [Neisseria flavescens
NRL30031/H210]
Length = 374
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+I LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I
Sbjct: 17 RILSLFSGCGGLDLGFHQA----GYETVWANDFSHWACESFRKNIGDVIVEGDIEQIDPN 72
Query: 63 DI--PDHDVLLAGFPCQPFSQ 81
D PD D++L GFPCQ FS
Sbjct: 73 DPTIPDCDIILGGFPCQDFSM 93
>gi|321312120|ref|YP_004204407.1| cytosine-specific methyltransferase [Bacillus subtilis BSn5]
gi|320018394|gb|ADV93380.1| cytosine-specific methyltransferase [Bacillus subtilis BSn5]
Length = 380
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
K LF G GG+ + ++ V+ +++EI+ + TY+ N P+T GDI+++
Sbjct: 5 FKAISLFSGAGGMDIGFQKA----GVDVVWANEIDKDACNTYELNNPDTYLRRGDISEVY 60
Query: 61 T--QDIPDHDVLLAGFPCQPFSQAG 83
++ D+L G PCQ FS AG
Sbjct: 61 EELKNYNGIDLLFGGPPCQGFSVAG 85
>gi|125974232|ref|YP_001038142.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC
27405]
gi|125714457|gb|ABN52949.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC
27405]
Length = 483
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+ D F GIGG RL LE +C E + ++VK+Y + D+ K+
Sbjct: 1 MTFLDFFAGIGGFRLGLELA----GHKCIGFCEKDKFAVKSYRAMFDTEGEWYADDVTKL 56
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K++DIP D+ GFPCQ S AG
Sbjct: 57 KSEDIPYADIWCFGFPCQDISVAG 80
>gi|331677320|ref|ZP_08377999.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H591]
gi|331075055|gb|EGI46371.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H591]
Length = 415
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58
M+K DLF G GGIRL EQ + +C SSEI+ + + + DI
Sbjct: 1 MIKFVDLFSGTGGIRLGFEQAMKEIGLSTKCVKSSEIDKKAC-ETYKLNFDEESYCDIHD 59
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + DVLLAGFPCQ FS AG
Sbjct: 60 VDIDE--SFDVLLAGFPCQAFSYAG 82
>gi|189096062|pdb|2UYH|A Chain A, Hhai Dna Methyltransferase S87q-Q237s Mutant Complex
With 13mer Gcgc-Gmgc Oligonucleotide And Sah
Length = 327
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF DI ++
Sbjct: 12 LRFIDLFAGLGGFRLALE----SCGAECVYSNEWDKYAQEVYEMNFGEKPEG-DITQVNE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ IPDHD+L AGFPCQ FS G
Sbjct: 67 KTIPDHDILCAGFPCQAFSIQG 88
>gi|325130663|gb|EGC53404.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304]
gi|325134723|gb|EGC57362.1| DNA-cytosine methyltransferase [Neisseria meningitidis M13399]
gi|325144843|gb|EGC67131.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240013]
gi|325205668|gb|ADZ01121.1| DNA-cytosine methyltransferase [Neisseria meningitidis M04-240196]
Length = 316
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
KI LF G GG+ L F N + +++EI+ ++V+TY+ N N ++ G
Sbjct: 14 YKIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHG 73
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI + + D+++ GFPCQ S G
Sbjct: 74 DIWQYLDEIPTSADIIIGGFPCQDISING 102
>gi|153939897|ref|YP_001391385.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum F str.
Langeland]
gi|152935793|gb|ABS41291.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum F str.
Langeland]
gi|295319412|gb|ADF99789.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum F str.
230613]
Length = 547
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M KI DLF G GG+ L E T E E N + KTY N N + DI K+
Sbjct: 1 MYKIVDLFAGAGGLSLGFEMT---EKFEIVAFVENNKNAAKTYLKNHSNIKNYEDILKLD 57
Query: 61 TQD----IPDHDVLLAGFPCQPFSQA 82
D P+ DV++ G PCQ FS A
Sbjct: 58 FNDILSSNPNIDVVIGGPPCQGFSNA 83
>gi|192824080|ref|YP_001994542.1| gp84 [Mycobacterium phage KBG]
gi|190610310|gb|ACE79832.1| gp84 [Mycobacterium phage KBG]
Length = 237
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
+ + LF GIGG+ L LE + EI+P+ + + ++P+ D+
Sbjct: 1 MNVLSLFAGIGGLELGLE----RLGMRVVGQVEIDPFCQQVLEKHWPDVPKHDDVRTAVE 56
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
++++ P DV+ GFPCQPFS AG
Sbjct: 57 WWESEERPGVDVICGGFPCQPFSSAG 82
>gi|296159065|ref|ZP_06841892.1| DNA-cytosine methyltransferase [Burkholderia sp. Ch1-1]
gi|295890626|gb|EFG70417.1| DNA-cytosine methyltransferase [Burkholderia sp. Ch1-1]
Length = 426
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGGIR+ E +C F+SE N +S KTY+ N+P I I +
Sbjct: 71 FRFIDLFAGIGGIRMGFE----AHGGDCVFTSEWNDFSTKTYRENYPGDGEHALIGDIVS 126
Query: 62 Q---DIPDHDVLLAGFPCQPFSQAG 83
++P HDVLL GFPCQPFS AG
Sbjct: 127 FPAEEVPGHDVLLGGFPCQPFSIAG 151
>gi|256958119|ref|ZP_05562290.1| C5 methyltransferase alpha subunit [Enterococcus faecalis DS5]
gi|256948615|gb|EEU65247.1| C5 methyltransferase alpha subunit [Enterococcus faecalis DS5]
Length = 298
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+K DLF GIGG RL +E EC EI+ ++ +Y+A I
Sbjct: 1 MKFLDLFAGIGGFRLGMESA----GHECIGFCEIDKFARTSYKAIHDTTGEVEMHDITTI 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I DV+ GFPCQ FS AG
Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83
>gi|223933016|ref|ZP_03625010.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591]
gi|223898333|gb|EEF64700.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591]
Length = 451
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL +E + +C EI+ ++ +Y N + + DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGME----SQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
D +V+ GFPCQ FS AG
Sbjct: 57 TDHDFRQFRGQVEVICGGFPCQAFSLAG 84
>gi|327474139|gb|EGF19549.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
sanguinis SK408]
Length = 480
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
L+ DLF GIGG RL +E EC EI+ ++ + F DI +
Sbjct: 29 LRFIDLFSGIGGFRLGME----SVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDV 84
Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83
+ D++ GFPCQ FS AG
Sbjct: 85 SDDEFKKLRGKVDIICGGFPCQAFSIAG 112
>gi|260909972|ref|ZP_05916659.1| modification methylase EcoRII [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635922|gb|EEX53925.1| modification methylase EcoRII [Prevotella sp. oral taxon 472 str.
F0295]
Length = 370
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 18/96 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------------- 47
DLF GIGG + +C F+SE + + +Y+AN+
Sbjct: 6 FTFIDLFAGIGGFHTAM----RSVGGKCVFASEWDKNARLSYEANYIESEPHLFKKGGNG 61
Query: 48 PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI ++P+ D+ GFPCQPFS AG
Sbjct: 62 QYLYFNEDINHAIPSEMPNFDICCGGFPCQPFSVAG 97
>gi|154502686|ref|ZP_02039746.1| hypothetical protein RUMGNA_00499 [Ruminococcus gnavus ATCC 29149]
gi|153796569|gb|EDN78989.1| hypothetical protein RUMGNA_00499 [Ruminococcus gnavus ATCC 29149]
Length = 458
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
++ DLF GIGG R L + C E++ Y+ K Y+ + D I
Sbjct: 35 IRFFDLFSGIGGFREGLRRAG---GFTCVGHCEVDAYADKNYRLLFDTEGEWFCNDARTI 91
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+T+ +PD D+L AGFPCQ FS AG
Sbjct: 92 ETERMPDFDLLCAGFPCQAFSIAG 115
>gi|319757724|gb|ADV69666.1| DNA-cytosine methyltransferase [Streptococcus suis JS14]
Length = 451
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL +E + EC EI+ ++ +Y N + + DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGME----AQGHECLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
D +V+ GFPCQ FS AG
Sbjct: 57 TDHDFRQFRGQVEVICGGFPCQAFSLAG 84
>gi|306833678|ref|ZP_07466805.1| DNA (cytosine-5-)-methyltransferase [Streptococcus bovis ATCC
700338]
gi|304424448|gb|EFM27587.1| DNA (cytosine-5-)-methyltransferase [Streptococcus bovis ATCC
700338]
Length = 451
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL +E + EC EI+ ++ +Y N + + DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGME----AQGHECLGFCEIDKFARTSYKAIFNTEGEMEYHDIKEV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
D +V+ GFPCQ FS AG
Sbjct: 57 TDHDFRQFRGQVEVICGGFPCQAFSLAG 84
>gi|193216537|ref|YP_001999779.1| cytosine-specific methyltransferase, related to HhaI [Mycoplasma
arthritidis 158L3-1]
gi|193001860|gb|ACF07075.1| cytosine-specific methyltransferase, related to HhaI [Mycoplasma
arthritidis 158L3-1]
Length = 327
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK DLF G+GG R+ LE +C +S+E + ++ + Y+ NF DI I
Sbjct: 12 LKFIDLFAGLGGFRIALE----SCGAKCVYSNEWDKHAQEVYKMNFNEIPDG-DITLINE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIPDHDVL AGFPCQ FS +G
Sbjct: 67 NDIPDHDVLCAGFPCQAFSISG 88
>gi|22538008|ref|NP_688859.1| prophage LambdaSa2, type II DNA modification methyltransferase
[Streptococcus agalactiae 2603V/R]
gi|22534910|gb|AAN00732.1|AE014276_13 prophage LambdaSa2, type II DNA modification methyltransferase,
putative [Streptococcus agalactiae 2603V/R]
Length = 437
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56
+K DLF GIGG RL +EQ EC EIN ++ +Y+ +
Sbjct: 1 MKFLDLFAGIGGFRLGMEQA----GHECIGFCEINKFARASYKVIHDTEGEIELHDITRV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I DV+ GFPCQ FS AG
Sbjct: 57 SDEFIRGIGSVDVICGGFPCQAFSIAG 83
>gi|1709152|sp|P50185|MTD5_DACSA RecName: Full=Modification methylase DsaV; Short=M.DsaV; AltName:
Full=Cytosine-specific methyltransferase DsaV
gi|505694|gb|AAA86046.1| DsaV methyltransferase [Dactylococcopsis salina]
Length = 351
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK DLF GIGG+R+ E +C FSSEI+ + +TY+ANF DI K+
Sbjct: 6 LKFIDLFAGIGGMRIPFE----ELGGKCVFSSEIDKHCQRTYEANFGEMPTG-DITKLSA 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP HD+LLAGFPCQ FSQ G
Sbjct: 61 DSIPYHDLLLAGFPCQAFSQGG 82
>gi|57506196|ref|ZP_00372116.1| C-5 cytosine-specific DNA methylase [Campylobacter upsaliensis
RM3195]
gi|57015523|gb|EAL52317.1| C-5 cytosine-specific DNA methylase [Campylobacter upsaliensis
RM3195]
Length = 315
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI LF GIGGI L ++ + ++ E++ + TY+AN + +I D+AK+
Sbjct: 1 MKIGSLFAGIGGIELGFKKA----GFKTAWAVELDSKACITYKANHKHKIINNDLAKVDL 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ + D+L AGFPCQ FS AG
Sbjct: 57 KSLSKIDILTAGFPCQAFSVAG 78
>gi|319638577|ref|ZP_07993339.1| modification methylase NgoFVII [Neisseria mucosa C102]
gi|317400326|gb|EFV80985.1| modification methylase NgoFVII [Neisseria mucosa C102]
Length = 374
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+I LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I
Sbjct: 17 RILSLFSGCGGLDLGFHQA----GYETVWANDFSHWACESFRKNIGDVIVEGDIEQIDPN 72
Query: 63 DI--PDHDVLLAGFPCQPFSQ 81
D PD D++L GFPCQ FS
Sbjct: 73 DPTIPDCDIILGGFPCQDFSM 93
>gi|257882475|ref|ZP_05662128.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
1,231,502]
gi|294620467|ref|ZP_06699776.1| methyl transferase [Enterococcus faecium E1679]
gi|294623872|ref|ZP_06702700.1| methyl transferase [Enterococcus faecium U0317]
gi|257818133|gb|EEV45461.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
1,231,502]
gi|291593380|gb|EFF24945.1| methyl transferase [Enterococcus faecium E1679]
gi|291596826|gb|EFF28049.1| methyl transferase [Enterococcus faecium U0317]
Length = 380
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+ DLF GIGG RL +EQ +C EI+ ++ ++Y+A +
Sbjct: 1 MTFLDLFAGIGGFRLGMEQA----GHQCIGFCEIDEFARRSYKAIHDTRKEVEMHDITSV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + + D+L GFPCQ FS AG
Sbjct: 57 SDEFVRSLGPVDILCGGFPCQAFSIAG 83
>gi|188588765|ref|YP_001921868.1| DNA-cytosine methyltransferase [Clostridium botulinum E3 str.
Alaska E43]
gi|188499046|gb|ACD52182.1| DNA-cytosine methyltransferase [Clostridium botulinum E3 str.
Alaska E43]
Length = 304
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ DLFCG GG L ++ E + + ++K Y NF + + D+ I
Sbjct: 1 MKVIDLFCGCGGFSLGMQNA----GFEIVAAYDNWEPAIKVYDENFNHPIYNIDLQNISL 56
Query: 62 QDIP-----DHDVLLAGFPCQPFSQAG 83
++I + DV++ G PCQ +S AG
Sbjct: 57 EEIESMKKLNPDVIIGGPPCQDYSSAG 83
>gi|126658057|ref|ZP_01729209.1| DNA cytosine methylase [Cyanothece sp. CCY0110]
gi|126620695|gb|EAZ91412.1| DNA cytosine methylase [Cyanothece sp. CCY0110]
Length = 358
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
DLF GIGG+R+ ++++ +C FSSE + Y+ +TYQ NF DI KI QDIP
Sbjct: 44 DLFAGIGGMRMGFSRSYS----QCVFSSEWDKYAQQTYQFNFGEKPFG-DINKINPQDIP 98
Query: 66 DHDVLLAGFPCQPFSQAG 83
DHD+L+ GFPCQPFS G
Sbjct: 99 DHDILIGGFPCQPFSTIG 116
>gi|262402975|ref|ZP_06079535.1| DNA-methyltransferase MKpn2kI [Vibrio sp. RC586]
gi|262350474|gb|EEY99607.1| DNA-methyltransferase MKpn2kI [Vibrio sp. RC586]
Length = 410
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGGIRL + N C F+SE + ++ KTY AN+ DI +I
Sbjct: 53 FTFIDLFAGIGGIRLPFQ----KLNGHCVFTSEWDKFAQKTYLANYGEMPSG-DITQISA 107
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DI DHD+LL GFPCQ FSQAG
Sbjct: 108 KDIKDHDILLGGFPCQAFSQAG 129
>gi|261392162|emb|CAX49670.1| putative modification methylase (cytosine-specific
methyltransferase) [Neisseria meningitidis 8013]
gi|309378365|emb|CBX23011.1| putative DNA cytosine methyltransferase [Neisseria lactamica
Y92-1009]
Length = 389
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
KI LF G GG+ L F N + +++EI+ ++V+TY+ N N ++ G
Sbjct: 87 YKIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHG 146
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI + + D+++ GFPCQ S G
Sbjct: 147 DIWQHLDEIPTSADIIIGGFPCQDISING 175
>gi|315637499|ref|ZP_07892709.1| modification methylase EcoRII [Arcobacter butzleri JV22]
gi|315478217|gb|EFU68940.1| modification methylase EcoRII [Arcobacter butzleri JV22]
Length = 326
Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGGIR E+ F + E F+SE++ Y+ Y N +GDI KI
Sbjct: 20 YKFIDLFAGIGGIRTGFEKVFKEES-EFVFASELDRYAQIAYF-ENYNEKPYGDITKINE 77
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIP+HD++LAGFPCQ FS AG
Sbjct: 78 EDIPNHDIVLAGFPCQAFSIAG 99
>gi|254805366|ref|YP_003083587.1| putative type II DNA modification methylase [Neisseria meningitidis
alpha14]
gi|254668908|emb|CBA07091.1| putative type II DNA modification methylase [Neisseria meningitidis
alpha14]
gi|308389730|gb|ADO32050.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis
alpha710]
Length = 389
Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
KI LF G GG+ L F N + +++EI+ ++V+TY+ N N ++ G
Sbjct: 87 YKIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHG 146
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI + + D+++ GFPCQ S G
Sbjct: 147 DIWQYLDEIPTSADIIIGGFPCQDISING 175
>gi|325130383|gb|EGC53149.1| DNA-cytosine methyltransferase [Neisseria meningitidis
OX99.30304]
Length = 425
Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI
Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+T DIPD D+LLAGFPCQ FS AG
Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87
>gi|304387455|ref|ZP_07369646.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC
13091]
gi|304338548|gb|EFM04667.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC
13091]
Length = 273
Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI
Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+T DIPD D+LLAGFPCQ FS AG
Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87
>gi|254673505|emb|CBA08927.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis
alpha275]
Length = 273
Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI
Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+T DIPD D+LLAGFPCQ FS AG
Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87
>gi|240128365|ref|ZP_04741026.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae SK-93-1035]
gi|268686763|ref|ZP_06153625.1| DNA modification methylase [Neisseria gonorrhoeae SK-93-1035]
gi|268627047|gb|EEZ59447.1| DNA modification methylase [Neisseria gonorrhoeae SK-93-1035]
Length = 423
Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI
Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+T DIPD D+LLAGFPCQ FS AG
Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87
>gi|161870123|ref|YP_001599293.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis
053442]
gi|225075874|ref|ZP_03719073.1| hypothetical protein NEIFLAOT_00897 [Neisseria flavescens
NRL30031/H210]
gi|296313674|ref|ZP_06863615.1| DNA (cytosine-5-)-methyltransferase [Neisseria polysaccharea ATCC
43768]
gi|161595676|gb|ABX73336.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis
053442]
gi|224952820|gb|EEG34029.1| hypothetical protein NEIFLAOT_00897 [Neisseria flavescens
NRL30031/H210]
gi|296839734|gb|EFH23672.1| DNA (cytosine-5-)-methyltransferase [Neisseria polysaccharea ATCC
43768]
Length = 423
Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI
Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+T DIPD D+LLAGFPCQ FS AG
Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87
>gi|59801103|ref|YP_207815.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae FA 1090]
gi|121634967|ref|YP_975212.1| DNA modification methylase [Neisseria meningitidis FAM18]
gi|194098793|ref|YP_002001855.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae NCCP11945]
gi|239999085|ref|ZP_04719009.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae 35/02]
gi|240014008|ref|ZP_04720921.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae DGI18]
gi|240016449|ref|ZP_04722989.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae FA6140]
gi|240080568|ref|ZP_04725111.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae FA19]
gi|240113063|ref|ZP_04727553.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae MS11]
gi|240115818|ref|ZP_04729880.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae PID18]
gi|240118116|ref|ZP_04732178.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae PID1]
gi|240121574|ref|ZP_04734536.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae PID24-1]
gi|240123666|ref|ZP_04736622.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae PID332]
gi|240125856|ref|ZP_04738742.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae SK-92-679]
gi|254493863|ref|ZP_05107034.1| DNA modification methylase [Neisseria gonorrhoeae 1291]
gi|260440365|ref|ZP_05794181.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae DGI2]
gi|268594923|ref|ZP_06129090.1| DNA modification methylase [Neisseria gonorrhoeae 35/02]
gi|268596698|ref|ZP_06130865.1| DNA modification methylase [Neisseria gonorrhoeae FA19]
gi|268599147|ref|ZP_06133314.1| DNA modification methylase [Neisseria gonorrhoeae MS11]
gi|268601493|ref|ZP_06135660.1| DNA modification methylase [Neisseria gonorrhoeae PID18]
gi|268603831|ref|ZP_06137998.1| DNA modification methylase [Neisseria gonorrhoeae PID1]
gi|268682295|ref|ZP_06149157.1| DNA modification methylase [Neisseria gonorrhoeae PID332]
gi|268684453|ref|ZP_06151315.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679]
gi|291043662|ref|ZP_06569378.1| DNA modification methylase [Neisseria gonorrhoeae DGI2]
gi|293398965|ref|ZP_06643130.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|59717998|gb|AAW89403.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae FA 1090]
gi|120866673|emb|CAM10425.1| DNA modification methylase [Neisseria meningitidis FAM18]
gi|193934083|gb|ACF29907.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae NCCP11945]
gi|226512903|gb|EEH62248.1| DNA modification methylase [Neisseria gonorrhoeae 1291]
gi|268548312|gb|EEZ43730.1| DNA modification methylase [Neisseria gonorrhoeae 35/02]
gi|268550486|gb|EEZ45505.1| DNA modification methylase [Neisseria gonorrhoeae FA19]
gi|268583278|gb|EEZ47954.1| DNA modification methylase [Neisseria gonorrhoeae MS11]
gi|268585624|gb|EEZ50300.1| DNA modification methylase [Neisseria gonorrhoeae PID18]
gi|268587962|gb|EEZ52638.1| DNA modification methylase [Neisseria gonorrhoeae PID1]
gi|268622579|gb|EEZ54979.1| DNA modification methylase [Neisseria gonorrhoeae PID332]
gi|268624737|gb|EEZ57137.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679]
gi|291012125|gb|EFE04114.1| DNA modification methylase [Neisseria gonorrhoeae DGI2]
gi|291610379|gb|EFF39489.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|317164377|gb|ADV07918.1| putative DNA modification methylase (N.MgoV) [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 423
Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI
Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+T DIPD D+LLAGFPCQ FS AG
Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87
>gi|15676920|ref|NP_274067.1| modification methylase NlaIV [Neisseria meningitidis MC58]
gi|7226272|gb|AAF41432.1| modification methylase NlaIV [Neisseria meningitidis MC58]
gi|325136241|gb|EGC58849.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579]
gi|325202033|gb|ADY97487.1| DNA-cytosine methyltransferase [Neisseria meningitidis
M01-240149]
gi|325208214|gb|ADZ03666.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis
NZ-05/33]
Length = 423
Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI
Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+T DIPD D+LLAGFPCQ FS AG
Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87
>gi|12229863|sp|Q59605|MTB5_NEIGO RecName: Full=Modification methylase NgoBV; Short=M.NgoBV;
AltName: Full=Cytosine-specific methyltransferase
NgoBV; Short=M.NgoV
gi|1165242|gb|AAA86268.1| M.NgoV DNA methylase [Neisseria gonorrhoeae]
Length = 423
Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI
Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+T DIPD D+LLAGFPCQ FS AG
Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87
>gi|218768275|ref|YP_002342787.1| DNA modification methylase [Neisseria meningitidis Z2491]
gi|121052283|emb|CAM08611.1| DNA modification methylase [Neisseria meningitidis Z2491]
Length = 423
Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF G+ GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI
Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+T DIPD D+LLAGFPCQ FS AG
Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87
>gi|288906872|emb|CBJ21706.1| type II DNA modification methyltransferase [Streptococcus mitis
B6]
Length = 380
Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56
+K DLF GIGG RL +E +C EI+ ++ ++Y+A +
Sbjct: 1 MKFLDLFAGIGGFRLGMESA----GHKCIGFCEIDKFARESYKAIHNTKGEIELHDITAV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I D++ GFPCQ FS AG
Sbjct: 57 SDESIRGIGSVDIICGGFPCQAFSIAG 83
>gi|307729019|ref|YP_003906243.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1003]
gi|307583554|gb|ADN56952.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1003]
Length = 428
Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E C F+SE N +S KTYQ N + GDI
Sbjct: 73 FRFIDLFAGIGGIRRGFE----AHGGRCVFTSEWNEFSKKTYQQNHRDPDDAHQFVGDIV 128
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
Q +P HDVLLAGFPCQPFS AG
Sbjct: 129 SFPEQSVPSHDVLLAGFPCQPFSIAG 154
>gi|291568714|dbj|BAI90986.1| cytosine-specific methyltransferase [Arthrospira platensis
NIES-39]
Length = 406
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ LF G GG+ L + E ++ + N + +T++ N T+ +I +I
Sbjct: 17 KLVSLFSGCGGMDLPFHRA----GFEVVWAIDCNGAACRTFRRNISETIACNNIQEIDIT 72
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+P D++ GFPCQ FS G
Sbjct: 73 KVPKADLITGGFPCQDFSMIG 93
>gi|284050655|ref|ZP_06380865.1| DNA-cytosine methyltransferase [Arthrospira platensis str.
Paraca]
gi|79835464|gb|ABB52092.1| Mod [Arthrospira platensis]
Length = 406
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ LF G GG+ L + E ++ + N + +T++ N T+ +I +I
Sbjct: 17 KLVSLFSGCGGMDLPFHRA----GFEVVWAIDCNGAACRTFRRNISETIACNNIQEIDIT 72
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+P D++ GFPCQ FS G
Sbjct: 73 KVPKADLITGGFPCQDFSMIG 93
>gi|304373674|ref|YP_003858419.1| putative DNA-methyltransferase, type II restriction-modification
system [Enterobacteria phage RB16]
gi|299829630|gb|ADJ55423.1| putative DNA-methyltransferase, type II restriction-modification
system [Enterobacteria phage RB16]
Length = 302
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI DL G+GG+R + F VEC +SEI+ ++ +TY N+ + + GD+ I
Sbjct: 1 MKIIDLCAGVGGVRFGFDNAFG--GVECLLTSEIDKHAQQTYIENWGDDNLQGDLFAIDE 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+PDHD+LLAGFPCQ FS+AG
Sbjct: 59 NKVPDHDILLAGFPCQAFSKAG 80
>gi|225075681|ref|ZP_03718880.1| hypothetical protein NEIFLAOT_00697 [Neisseria flavescens
NRL30031/H210]
gi|224952952|gb|EEG34161.1| hypothetical protein NEIFLAOT_00697 [Neisseria flavescens
NRL30031/H210]
Length = 389
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
KI LF G GG+ L F N + +++EI+ ++V+TY+ N N ++ G
Sbjct: 87 YKIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHG 146
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI + + D+++ GFPCQ S G
Sbjct: 147 DIWQHLDEIPTSADIIIGGFPCQDISING 175
>gi|218133430|ref|ZP_03462234.1| hypothetical protein BACPEC_01295 [Bacteroides pectinophilus ATCC
43243]
gi|217990805|gb|EEC56811.1| hypothetical protein BACPEC_01295 [Bacteroides pectinophilus ATCC
43243]
Length = 320
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
+ DL GIGG RL LE +C E + ++ + D+ K+
Sbjct: 4 MTFLDLCSGIGGFRLGLETA----GHKCIGYCEYDKFARASYEAMYDTEGEWKAHDVTKL 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K +D+P D+ GFPCQ S AG
Sbjct: 60 KPEDVPYADIWCFGFPCQDISVAG 83
>gi|154484133|ref|ZP_02026581.1| hypothetical protein EUBVEN_01844 [Eubacterium ventriosum ATCC
27560]
gi|149735175|gb|EDM51061.1| hypothetical protein EUBVEN_01844 [Eubacterium ventriosum ATCC
27560]
Length = 366
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60
+ DLF GIGGIR + F N++ F SE + Y+ KTY+AN+ + DI KI
Sbjct: 14 YRAIDLFAGIGGIRKGFDNAFGK-NIDTVFVSEWDEYAQKTYRANYKDKFEIAGDITKID 72
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+DIP+ D+ LAGFPCQ FS AG
Sbjct: 73 EKDIPEFDICLAGFPCQAFSLAG 95
>gi|261400634|ref|ZP_05986759.1| DNA (cytosine-5-)-methyltransferase [Neisseria lactamica ATCC
23970]
gi|313668389|ref|YP_004048673.1| DNA modification methylase [Neisseria lactamica ST-640]
gi|1709164|sp|P50182|MTN4_NEILA RecName: Full=Modification methylase NlaIV; Short=M.NlaIV;
AltName: Full=Cytosine-specific methyltransferase NlaIV
gi|476227|gb|AAA53237.1| M.NlaIV [Neisseria lactamica]
gi|269209540|gb|EEZ75995.1| DNA (cytosine-5-)-methyltransferase [Neisseria lactamica ATCC
23970]
gi|313005851|emb|CBN87307.1| DNA modification methylase [Neisseria lactamica 020-06]
Length = 423
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF G+ GIR EQ ++V +C F+SEI P +++ + N+P+ + +GDI KI
Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACKCVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+T DIPD D+LLAGFPCQ FS AG
Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFAG 87
>gi|212716092|ref|ZP_03324220.1| hypothetical protein BIFCAT_01005 [Bifidobacterium catenulatum DSM
16992]
gi|212661459|gb|EEB22034.1| hypothetical protein BIFCAT_01005 [Bifidobacterium catenulatum DSM
16992]
Length = 453
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIK 60
+ DLF GIGGIR H FSSE N + + + GDI K+
Sbjct: 84 FRTIDLFAGIGGIRRGFASAGGHA----VFSSEWNEFSARTYRTNYGFTEQMAGDITKVD 139
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPD DV+LAGFPCQPFS AG
Sbjct: 140 VDDIPDCDVVLAGFPCQPFSVAG 162
>gi|255262721|ref|ZP_05342063.1| cytosine-specific methyltransferase NlaX [Thalassiobium sp. R2A62]
gi|255105056|gb|EET47730.1| cytosine-specific methyltransferase NlaX [Thalassiobium sp. R2A62]
Length = 421
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGGIR+ + C FSSE + +S K+Y AN+ DI +I
Sbjct: 80 FRFIDLFAGIGGIRMPFQ----ELGGHCVFSSEWDKFSQKSYAANYGEVPQG-DITQIAA 134
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIP+HD+LLAGFPCQ FSQAG
Sbjct: 135 NDIPEHDLLLAGFPCQAFSQAG 156
>gi|121635255|ref|YP_975500.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis FAM18]
gi|313668027|ref|YP_004048311.1| C-5 cytosine-specific DNA methylase [Neisseria lactamica ST-640]
gi|120866961|emb|CAM10721.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis FAM18]
gi|313005489|emb|CBN86924.1| C-5 cytosine-specific DNA methylase [Neisseria lactamica 020-06]
Length = 383
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
KI LF G GG+ L F N + +++EI+ ++V+TY+ N N ++ G
Sbjct: 81 YKIISLFSGCGGMDLGFLGGFEFLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHG 140
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI + + D+++ GFPCQ S G
Sbjct: 141 DIWQHLDEIPTSADIIIGGFPCQDISING 169
>gi|312901958|ref|ZP_07761220.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX0470]
gi|311290894|gb|EFQ69450.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX0470]
Length = 380
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
++ DLF GIGG RL +EQ +H C EI+ ++ ++Y+A +
Sbjct: 1 MRFLDLFAGIGGFRLGMEQASHH----CIGFCEIDKFARRSYKAIHDTSKEVEMHDITSV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q + D+L GFPCQ FS AG
Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83
>gi|209520785|ref|ZP_03269531.1| DNA-cytosine methyltransferase [Burkholderia sp. H160]
gi|209498782|gb|EDZ98891.1| DNA-cytosine methyltransferase [Burkholderia sp. H160]
Length = 432
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---------TLI 52
+ DLF GIGGIR+ E EC F+SE N +S +TY+ N+ +
Sbjct: 71 FRFIDLFAGIGGIRMGFET----HGGECVFTSEWNEFSTRTYRENYGENAGSGTDSAHAL 126
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
GDI +D+P HDVLL GFPCQPFS AG
Sbjct: 127 IGDIVAFPAEDVPSHDVLLGGFPCQPFSIAG 157
>gi|227553877|ref|ZP_03983924.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus
faecalis HH22]
gi|307285310|ref|ZP_07565454.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX0860]
gi|227176989|gb|EEI57961.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus
faecalis HH22]
gi|306502887|gb|EFM72149.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX0860]
Length = 380
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+ DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + +
Sbjct: 1 MTFLDLFAGIGGFRLGMEQAGHH----CIGFCEIDDFARRSYKAIYDTSEEVEMYDITSV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q + D+L GFPCQ FS AG
Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83
>gi|29566487|ref|NP_818053.1| gp80 [Mycobacterium phage Che9d]
gi|29425212|gb|AAN07998.1| gp80 [Mycobacterium phage Che9d]
Length = 252
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
+ + LF GIGG+ L LE+ + EINPY + ++P+ D+
Sbjct: 1 MNVLSLFSGIGGLELGLERA----GMTVVGQVEINPYCRQILAKHWPHVPRHDDVRTTVE 56
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
++++ P D++ GFPCQ S AG
Sbjct: 57 WWESEERPRVDLICGGFPCQDISNAG 82
>gi|238898088|ref|YP_002923769.1| DNA cytosine methylase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465848|gb|ACQ67622.1| DNA cytosine methylase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 401
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60
+ DLF GIGGIR+ + + EC F+SE N +S KTY N+ GDI
Sbjct: 49 FRFIDLFAGIGGIRMGF----DAQGGECVFTSEWNRFSKKTYIQNYGAPHPFVGDIVPYP 104
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+D+PDHDVLLAGFPCQPFS AG
Sbjct: 105 AEDVPDHDVLLAGFPCQPFSIAG 127
>gi|298373723|ref|ZP_06983712.1| modification methylase EcoRII [Bacteroidetes oral taxon 274 str.
F0058]
gi|298274775|gb|EFI16327.1| modification methylase EcoRII [Bacteroidetes oral taxon 274 str.
F0058]
Length = 457
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-NPYSVKTYQANFPNTLIFGDIAKIK 60
LK DLF G+GG L L +C F+SEI + +I GDI KIK
Sbjct: 12 LKFIDLFAGLGGFHLAL----KELGCKCVFASEIKDDLRKLYKINFPETPIIEGDITKIK 67
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+++IP HD+L AGFPCQPFSQAG
Sbjct: 68 SEEIPSHDILCAGFPCQPFSQAG 90
>gi|237725529|ref|ZP_04556010.1| DNA (cytosine-5-)-methyltransferase [Bacteroides sp. D4]
gi|229436216|gb|EEO46293.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei 5_1_36/D4]
Length = 374
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 18/96 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------------- 47
DLF GIGG + +C F+SE + Y+ +Y+AN+
Sbjct: 6 FTFIDLFAGIGGFHTAMH----SVGGKCVFASEWDKYARISYEANYKDIEPDLFQKDSYG 61
Query: 48 PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI + + IP DV GFPCQPFS AG
Sbjct: 62 NYLFFNNDITEAIPESIPAFDVCCGGFPCQPFSIAG 97
>gi|227536485|ref|ZP_03966534.1| site-specific DNA-methyltransferase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227243562|gb|EEI93577.1| site-specific DNA-methyltransferase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 349
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML+ LF GIGG + + FS E +P+ + +PNT + DI +
Sbjct: 1 MLRHGSLFSGIGGFDIAASW----MGWQNVFSCEKDPFCRTVLKHYWPNTAHYEDIYDFR 56
Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83
D++ GFPCQPFSQAG
Sbjct: 57 ATHFRGHIDIISGGFPCQPFSQAG 80
>gi|269122857|ref|YP_003305434.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
gi|268314183|gb|ACZ00557.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
Length = 329
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK DLF G+GG RL LE EC +S+E + + K YQ NF + DI I
Sbjct: 12 LKFIDLFAGLGGFRLSLE----SFGAECVYSNEWDKNAQKVYQMNFGDMPEG-DITLIDE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+IPDHD+L AGFPCQ FS +G
Sbjct: 67 NNIPDHDILCAGFPCQAFSISG 88
>gi|209525887|ref|ZP_03274422.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209493696|gb|EDZ94016.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 406
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ LF G GG+ L + + ++ + N + +T++ N + +I +I+
Sbjct: 17 KLISLFSGCGGMDLPFHRA----GFQVVWAIDCNEAACQTFRRNISENIACDNIQEIEIT 72
Query: 63 DIPDHDVLLAGFPCQPFSQ 81
+P D++ GFPCQ FS
Sbjct: 73 KVPQADLITGGFPCQDFSM 91
>gi|119484300|ref|ZP_01618917.1| modification methylase NlaIV [Lyngbya sp. PCC 8106]
gi|119457774|gb|EAW38897.1| modification methylase NlaIV [Lyngbya sp. PCC 8106]
Length = 449
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58
MLK DLF GIGG+RL E+ EC +SEI+ + + Y NF + GDI +
Sbjct: 1 MLKFIDLFAGIGGLRLGFERGIASLGLRGECLLASEIDAEASQVYSQNFL-HVPEGDIRQ 59
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
IK+ +P HDVLLAGFPCQ FS AG
Sbjct: 60 IKS--LPKHDVLLAGFPCQSFSYAG 82
>gi|169834211|ref|YP_001693507.1| hypothetical protein SPH_0083 [Streptococcus pneumoniae
Hungary19A-6]
gi|168996713|gb|ACA37325.1| hypothetical protein SPH_0083 [Streptococcus pneumoniae
Hungary19A-6]
Length = 255
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56
+K DLF GIGG R+ +E EC EI+ ++ +Y+A +
Sbjct: 1 MKFLDLFAGIGGFRIGMESA----GHECIGFCEIDKFARASYKAIHDTKGEIELHDITTV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I DV+ GFPCQ FS AG
Sbjct: 57 SDDTIRGIGHVDVICGGFPCQAFSIAG 83
>gi|315580106|gb|EFU92297.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX0309A]
Length = 382
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+ DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + +
Sbjct: 1 MTFLDLFAGIGGFRLGMEQAGHH----CIGFCEIDDFARRSYKAIYDTSEEVEMYDITSV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q + D+L GFPCQ FS AG
Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83
>gi|56751653|ref|YP_172354.1| hypothetical protein syc1644_d [Synechococcus elongatus PCC 6301]
gi|81301269|ref|YP_401477.1| DNA-cytosine methyltransferase [Synechococcus elongatus PCC 7942]
gi|56686612|dbj|BAD79834.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81170150|gb|ABB58490.1| DNA-cytosine methyltransferase [Synechococcus elongatus PCC 7942]
Length = 424
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 48/88 (54%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDI 56
DLF GIGG R+ E+ +C F+SE + + KTY+ANF +I
Sbjct: 71 FTFIDLFAGIGGTRMGFERA----GGKCVFTSEWDTSAQKTYRANFSVDEHPIIGDIHEI 126
Query: 57 AKIKTQDI-PDHDVLLAGFPCQPFSQAG 83
D+ P+HDVL+AGFPCQPFS AG
Sbjct: 127 TVEGKWDLLPEHDVLVAGFPCQPFSIAG 154
>gi|227517066|ref|ZP_03947115.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus
faecalis TX0104]
gi|255975250|ref|ZP_05425836.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T2]
gi|227075490|gb|EEI13453.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus
faecalis TX0104]
gi|255968122|gb|EET98744.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T2]
Length = 384
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+ DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + +
Sbjct: 5 MTFLDLFAGIGGFRLGMEQAGHH----CIGFCEIDDFARRSYKAIYDTSEEVEMYDITSV 60
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q + D+L GFPCQ FS AG
Sbjct: 61 SDEFIQSLGPVDILCGGFPCQAFSIAG 87
>gi|256760956|ref|ZP_05501536.1| type II restriction-modification system methylation subunit
[Enterococcus faecalis T3]
gi|256682207|gb|EEU21902.1| type II restriction-modification system methylation subunit
[Enterococcus faecalis T3]
Length = 405
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGG RL + T V+ FSSE + ++ KTY ANF DI +I
Sbjct: 95 YTMIDLFAGIGGTRLGFQLTGK---VKSVFSSEWDKFAQKTYFANFGEYPHG-DITQIDE 150
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ +P+HD+L+AGFPCQ FSQAG
Sbjct: 151 KVVPNHDILVAGFPCQAFSQAG 172
>gi|116627564|ref|YP_820183.1| site-specific DNA methylase [Streptococcus thermophilus LMD-9]
gi|116100841|gb|ABJ65987.1| Site-specific DNA methylase [Streptococcus thermophilus LMD-9]
Length = 406
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF G GG+ L + ++++ +V+TY+ N N ++ GDI KI +
Sbjct: 4 LNLLSLFSGAGGMDLGFKNA----GFNILWANDFQKDAVETYKNNIGNHIVLGDITKIDS 59
Query: 62 QDIP--DHDVLLAGFPCQPFSQA 82
+IP D DV++ GFPCQ FS A
Sbjct: 60 SEIPGTDIDVVIGGFPCQGFSIA 82
>gi|169334482|ref|ZP_02861675.1| hypothetical protein ANASTE_00885 [Anaerofustis stercorihominis
DSM 17244]
gi|169259199|gb|EDS73165.1| hypothetical protein ANASTE_00885 [Anaerofustis stercorihominis
DSM 17244]
Length = 337
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/83 (48%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60
++ DLF GIGGIRL E F N+E F SE + Y+ KTY NF + DI +I
Sbjct: 6 IRSIDLFAGIGGIRLGFENVFKD-NIETVFVSEWDKYAKKTYMENFNDDFEIAGDITEID 64
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
IP+ D+ LAGFPCQ FS AG
Sbjct: 65 ETSIPNFDICLAGFPCQAFSLAG 87
>gi|167751358|ref|ZP_02423485.1| hypothetical protein EUBSIR_02344 [Eubacterium siraeum DSM 15702]
gi|167655604|gb|EDR99733.1| hypothetical protein EUBSIR_02344 [Eubacterium siraeum DSM 15702]
Length = 316
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+ I LF GIGGI L EQ ++++IN + KTY+ NFPN DI +
Sbjct: 1 MTIGSLFAGIGGIDLGFEQA----GFRAIWANDINKNACKTYRYNFPNVNLYECDIRSLD 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ DVL AGFPCQPFS G
Sbjct: 57 PSILQPVDVLTAGFPCQPFSVCG 79
>gi|118577457|ref|YP_899696.1| DNA-cytosine methyltransferase [Pelobacter propionicus DSM 2379]
gi|118504962|gb|ABL01443.1| DNA-cytosine methyltransferase [Pelobacter propionicus DSM 2379]
Length = 313
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIF 53
M+ + LF G GG+ L F+ + +++E+N + +TY+ N + +
Sbjct: 7 MITVVSLFSGCGGMDLGFSGGFDFLGEHYAKTQFKIIWANELNGAACRTYRKNIGHHIKE 66
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
GDI + + D+++ GFPCQ S G
Sbjct: 67 GDIWQTMPEMPQSADLVIGGFPCQDISVNG 96
>gi|301020988|ref|ZP_07185039.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1]
gi|3660493|emb|CAA57706.1| M.EcoHK31I alpha polypeptide [Escherichia coli]
gi|300398362|gb|EFJ81900.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1]
Length = 309
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K++ F GIGG L LE+ +E F EIN + K + N+ + DI ++
Sbjct: 9 YKVSSFFAGIGGFDLGLEKA----GMEVVFQCEINKFCQKVLRKNWSKVPLHTDITRLNA 64
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
+IP+ +V GFPCQ S A
Sbjct: 65 DEIPESNVWCGGFPCQDVSSA 85
>gi|66391578|ref|YP_239103.1| hypothetical protein RB43ORF127c [Enterobacteria phage RB43]
gi|62288666|gb|AAX78649.1| hypothetical protein RB43ORF127c [Enterobacteria phage RB43]
Length = 302
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ DL G+GG+R+ ++ F+ VEC ++EI+ ++ +TY AN+ + GD+ I
Sbjct: 1 MKLIDLCAGVGGVRMGFDRAFD--GVECVLTAEIDKFAQQTYAANWGGDNLEGDLFAIDE 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+PDHD+LLAGFPCQ FS+AG
Sbjct: 59 NKVPDHDILLAGFPCQAFSKAG 80
>gi|2760954|gb|AAB95336.1| EaeI methyltransferase alpha subunit [Enterobacter aerogenes]
Length = 309
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K++ F GIGG L LE+ +E F EIN + K + N+PN + DI ++
Sbjct: 9 YKVSSFFAGIGGFDLGLEKA----GMEVVFQCEINKFCQKVLRKNWPNVPLHTDITQLNA 64
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
+IP+ V GFPCQ S A
Sbjct: 65 DEIPESSVWCGGFPCQDVSSA 85
>gi|315574420|gb|EFU86611.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX0309B]
Length = 386
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+ DLF GIGG RL +EQ +H C EI+ ++ ++Y+A + +
Sbjct: 5 MTFLDLFAGIGGFRLGMEQAGHH----CIGFCEIDDFARRSYKAIYDTSEEVEMYDITSV 60
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q + D+L GFPCQ FS AG
Sbjct: 61 SDEFIQSLGPVDILCGGFPCQAFSIAG 87
>gi|50914506|ref|YP_060478.1| Type II restriction-modification system methylation subunit
[Streptococcus pyogenes MGAS10394]
gi|40218542|gb|AAR83196.1| type II modification methylase [Streptococcus pyogenes]
gi|50261587|gb|AAT72355.1| methylase [Streptococcus pyogenes]
gi|50903580|gb|AAT87295.1| Type II restriction-modification system methylation subunit
[Streptococcus pyogenes MGAS10394]
gi|114386439|gb|ABI74454.1| DNA methyltransferase [Streptococcus pyogenes]
Length = 408
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K+ DLF GIGG RL + T VE F+SE + ++ KTY NF +T DI +I
Sbjct: 101 FKMIDLFAGIGGTRLGFQLTNE---VETVFTSEWDKFAQKTYITNFGDTPEG-DITQIDE 156
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L+AGFPCQ FSQAG
Sbjct: 157 NTIPDHDILVAGFPCQAFSQAG 178
>gi|25011412|ref|NP_735807.1| hypothetical protein gbs1370 [Streptococcus agalactiae NEM316]
gi|24412950|emb|CAD47029.1| unknown [Streptococcus agalactiae NEM316]
Length = 450
Score = 85.4 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL LE + EC EI+ ++ K+Y + F DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGLE----SQGHECLGFCEIDKFARKSYKAIFETEGEVEFHDIRQV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
QD D++ GFPCQ FS AG
Sbjct: 57 TDQDFRKFRGQVDIICVGFPCQAFSLAG 84
>gi|119488852|ref|ZP_01621814.1| NgoIM [Lyngbya sp. PCC 8106]
gi|119455013|gb|EAW36155.1| NgoIM [Lyngbya sp. PCC 8106]
Length = 385
Score = 85.4 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIK 60
+K +LF GIGG RL ++ N+E ++++ + N+++ DI +I
Sbjct: 1 MKAIELFAGIGGFRLGMKGA----NIETVWANDSSELSCRVYESNFGQNSIVLADITQID 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIP HD L AGFPCQPFS AG
Sbjct: 57 LSDIPHHDFLTAGFPCQPFSPAG 79
>gi|189439219|ref|YP_001954300.1| site-specific DNA methylase [Bifidobacterium longum DJO10A]
gi|189427654|gb|ACD97802.1| Site-specific DNA methylase [Bifidobacterium longum DJO10A]
Length = 323
Score = 85.4 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
++I DLF GIGGIR+ + Q +SSE N YS + GDI K+
Sbjct: 4 IRIADLFAGIGGIRMGMVQALGDA-AHVVYSSEWNKYSVQTYEANWHDENPVAGDITKVD 62
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD D+LLAGFPCQPFS AG
Sbjct: 63 EHDVPDIDLLLAGFPCQPFSIAG 85
>gi|23466029|ref|NP_696632.1| modification methylase very EcoRII
(cytosine-specificmethyltransferase [Bifidobacterium
longum NCC2705]
gi|23326750|gb|AAN25268.1| modification methylase very similar to EcoRII
(cytosine-specificmethyltransferase [Bifidobacterium
longum NCC2705]
Length = 323
Score = 85.4 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
++I DLF GIGGIR+ + Q +SSE N YS + GDI K+
Sbjct: 4 IRIADLFAGIGGIRMGMVQALGDA-AHVVYSSEWNKYSVQTYEANWHDENPVAGDITKVD 62
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD D+LLAGFPCQPFS AG
Sbjct: 63 EHDVPDIDLLLAGFPCQPFSIAG 85
>gi|321310755|ref|YP_004193084.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str.
Langford 1]
gi|319802599|emb|CBY93245.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str.
Langford 1]
Length = 362
Score = 85.4 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K+ DLF GIGG RL +T V FSSEI+ +S+KTY+ANF T DI KI +
Sbjct: 55 YKMIDLFAGIGGTRLGFYKTGK---VNVVFSSEIDKFSIKTYKANFGETPSG-DITKIGS 110
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIPDHD+L+ GFPCQ FSQAG
Sbjct: 111 EDIPDHDILVGGFPCQSFSQAG 132
>gi|23100788|ref|NP_694255.1| cytosine-specific DNA-methyltransferase [Oceanobacillus iheyensis
HTE831]
gi|22779022|dbj|BAC15289.1| cytosine-specific DNA-methyltransferase [Oceanobacillus iheyensis
HTE831]
Length = 370
Score = 85.4 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ LF GIGGI + EQ +++E++ ++ +TY+ NF + LI D+ IK
Sbjct: 3 YSVASLFAGIGGIDIGFEQA----GARVIWANEMDKHACETYRQNFESKLIEDDVRNIKE 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+PD D++ AG+PC FS AG
Sbjct: 59 SDMPDADIITAGWPCVAFSIAG 80
>gi|153815491|ref|ZP_01968159.1| hypothetical protein RUMTOR_01726 [Ruminococcus torques ATCC
27756]
gi|145847133|gb|EDK24051.1| hypothetical protein RUMTOR_01726 [Ruminococcus torques ATCC
27756]
Length = 439
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
++ DLF GIGG R L + C E++ Y+ K Y+ + D I
Sbjct: 16 IRFFDLFSGIGGFREGLRRAG---GFTCVGHCEVDAYADKNYRLLFDTEGEWFCNDARTI 72
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+T+ +PD D+L AGFPCQ FS AG
Sbjct: 73 ETERMPDFDLLCAGFPCQAFSIAG 96
>gi|168494837|ref|ZP_02718980.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|168494899|ref|ZP_02719042.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|168494952|ref|ZP_02719095.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|168494999|ref|ZP_02719142.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|183575153|gb|EDT95681.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|183575203|gb|EDT95731.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|183575231|gb|EDT95759.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|183575300|gb|EDT95828.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
Length = 360
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56
+K DLF GIGG RL +E +C EI+ ++ ++Y+A +
Sbjct: 1 MKFLDLFAGIGGFRLGMESA----GHKCIGFCEIDKFARESYKAIHNTKGEIELHDITAV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I D++ GFPCQ FS AG
Sbjct: 57 SDESIRGIGSVDIICGGFPCQAFSIAG 83
>gi|323495143|ref|ZP_08100228.1| DNA-methyltransferase MKpn2kI [Vibrio brasiliensis LMG 20546]
gi|323310583|gb|EGA63762.1| DNA-methyltransferase MKpn2kI [Vibrio brasiliensis LMG 20546]
Length = 443
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGGIR + C F+SE + ++ KTY N+
Sbjct: 84 FTYIDLFAGIGGIRQPFQ----ELGGHCVFTSEWDKFAQKTYLHNYGEMPNGDITKICVK 139
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ IP+HD+LL GFPCQ FSQAG
Sbjct: 140 EQIPEHDILLGGFPCQAFSQAG 161
>gi|228472108|ref|ZP_04056874.1| cytosine-specific methyltransferase NlaX [Capnocytophaga
gingivalis ATCC 33624]
gi|228276311|gb|EEK15035.1| cytosine-specific methyltransferase NlaX [Capnocytophaga
gingivalis ATCC 33624]
Length = 367
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI DLF GIGG L ++ + SEI+ ++ Y+ NFP+ GDI ++
Sbjct: 1 MKIIDLFSGIGGFALGFQRAGYQ--FTEHYFSEIDKQAIANYKYNFPHAKYIGDITTLQP 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DI D++ G PCQ FS AG
Sbjct: 59 ADIAGADIITFGSPCQDFSLAG 80
>gi|319644454|ref|ZP_07998887.1| hypothetical protein HMPREF9011_04490 [Bacteroides sp. 3_1_40A]
gi|317384095|gb|EFV65072.1| hypothetical protein HMPREF9011_04490 [Bacteroides sp. 3_1_40A]
Length = 139
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF GIGGIR LE + EC F+SEI +++K + N PN LI GDI ++
Sbjct: 5 IKFIDLFAGIGGIRCGLELAAHEAGYKTECVFTSEIKKHAIKVLKQNHPNELINGDITQV 64
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
++IPD D+ AGFPCQ FS G
Sbjct: 65 NEKEIPDFDICCAGFPCQSFSGGG 88
>gi|254413040|ref|ZP_05026812.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
gi|196180204|gb|EDX75196.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
Length = 355
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQ 62
I LF G GG+ L Q +++E + +TYQ+N PNT DI + +
Sbjct: 11 IVSLFSGCGGLDLGFRQA----GFNVVWANEYDKDIWQTYQSNHPNTFLDRRDIRHVPSA 66
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
DIPD ++ G PCQ +S+AG
Sbjct: 67 DIPDCFGIVGGPPCQSWSEAG 87
>gi|308184574|ref|YP_003928707.1| site-specific DNA methylase [Helicobacter pylori SJM180]
gi|308060494|gb|ADO02390.1| site-specific DNA methylase [Helicobacter pylori SJM180]
Length = 405
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
KI LF G GG+ L E ++++ +V+TYQ N + +I+GDI KI +
Sbjct: 6 YKIISLFSGCGGLDLGF----IKEGFEVIWANDFFKEAVETYQKNIGSHIIYGDITKIPS 61
Query: 62 QDIPD-HDVLLAGFPCQPFSQA 82
DIP+ DVLL GFPCQ FS A
Sbjct: 62 GDIPNECDVLLGGFPCQGFSVA 83
>gi|295675907|ref|YP_003604431.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1002]
gi|295435750|gb|ADG14920.1| DNA-cytosine methyltransferase [Burkholderia sp. CCGE1002]
Length = 430
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/89 (44%), Positives = 50/89 (56%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFG 54
+ DLF GIGGIR+ E EC F+SE N +S +TY+ N+ + G
Sbjct: 71 FRFIDLFAGIGGIRMGFE----AHGGECVFTSEWNDFSTRTYRENYGGNAASGSAHALIG 126
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI +D+P HDVLL GFPCQPFS AG
Sbjct: 127 DIVAFPAEDVPSHDVLLGGFPCQPFSIAG 155
>gi|325298663|ref|YP_004258580.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM
18170]
gi|324318216|gb|ADY36107.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM
18170]
Length = 463
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+K+ F G GG+ L EQ +E ++++I +TYQ N PNT+ DI ++
Sbjct: 1 MKVASFFSGCGGLDLGFEQA----GIEVIWANDIEASIHETYQYNHPNTILCKSDIRELH 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPD D + G PCQ +S+ G
Sbjct: 57 ASDIPDCDGFIGGPPCQSWSEGG 79
>gi|119493789|ref|ZP_01624358.1| type II restriction enzyme HaeII [Lyngbya sp. PCC 8106]
gi|119452484|gb|EAW33671.1| type II restriction enzyme HaeII [Lyngbya sp. PCC 8106]
Length = 689
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGGIRL E +C FSSE + + + GDI I
Sbjct: 10 FTFIDLFAGIGGIRLPFE----ELGGKCVFSSEWDE-AAQETYEANFGERPLGDITTIDP 64
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP HD+LLAGFPCQ FS G
Sbjct: 65 GSIPHHDILLAGFPCQAFSIIG 86
>gi|315639354|ref|ZP_07894516.1| DNA (cytosine-5-)-methyltransferase [Campylobacter upsaliensis
JV21]
gi|315480680|gb|EFU71322.1| DNA (cytosine-5-)-methyltransferase [Campylobacter upsaliensis
JV21]
Length = 320
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ LF G GG+ L + E F+++I+ + ++Y+ N ++ DI + ++
Sbjct: 5 VISLFSGCGGLDLGFIKA----GFEVVFANDIDKEACESYEKNIGKHILCKDIYTLDVKE 60
Query: 64 IPDHDVLLAGFPCQPFSQA 82
IP+ D+L+ GFPC F+ A
Sbjct: 61 IPNADLLIGGFPCLGFTIA 79
>gi|239621327|ref|ZP_04664358.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239515788|gb|EEQ55655.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 343
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
++I DLF GIGGIR+ + Q +SSE N YS + GDI K+
Sbjct: 24 IRIADLFAGIGGIRMGMVQALGDA-AHVVYSSEWNKYSVQTYEANWHDENPVAGDITKVD 82
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD D+LLAGFPCQPFS AG
Sbjct: 83 EHDVPDIDLLLAGFPCQPFSIAG 105
>gi|166237008|gb|ABY86226.1| BsaHI DNA methyltransferase [Geobacillus stearothermophilus]
Length = 323
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---DIAK 58
+++ DLF G GG+ E E + E +++ Y+ NF + +I ++
Sbjct: 1 MRVIDLFAGCGGMSKGFENA----GYEIVAAFENWKDAIEVYKKNFKHPVIEYDLSNVED 56
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
D+++ G PCQ +S AG
Sbjct: 57 YNIFKQFKPDMIIGGPPCQDYSSAG 81
>gi|319893523|ref|YP_004150398.1| DNA-cytosine methyltransferase [Staphylococcus pseudintermedius
HKU10-03]
gi|317163219|gb|ADV06762.1| DNA-cytosine methyltransferase [Staphylococcus pseudintermedius
HKU10-03]
Length = 394
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/82 (52%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K+ DLF GIGG RL + + NV+ FSSE + +S KTY+ANF DI +IK
Sbjct: 86 YKMIDLFAGIGGTRLGFQ---LNGNVKSVFSSEWDKFSQKTYKANFGEIPAG-DITEIKE 141
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIP+HD+L+ GFPCQ FSQAG
Sbjct: 142 GDIPNHDILVGGFPCQAFSQAG 163
>gi|119026301|ref|YP_910146.1| DNA-methyltransferase MKpn2kI [Bifidobacterium adolescentis ATCC
15703]
gi|118765885|dbj|BAF40064.1| DNA-methyltransferase MKpn2kI [Bifidobacterium adolescentis ATCC
15703]
Length = 383
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/82 (53%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGG RL ++T V+ FSSEIN +S KTY ANF DI +I
Sbjct: 73 YRSIDLFAGIGGTRLGFQETGR---VKVVFSSEINKFSAKTYHANFGEYPAG-DITQIAA 128
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+L+ GFPCQ FSQAG
Sbjct: 129 SDIPDHDILVGGFPCQAFSQAG 150
>gi|168490143|ref|ZP_02714342.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae SP195]
gi|183571468|gb|EDT91996.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae SP195]
gi|321157174|emb|CBW39159.1| Cytosine-specific DNA methyltransferase [Streptococcus phage
11865]
Length = 360
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56
+K DLF GIGG RL +E +C EI+ ++ ++Y+A +
Sbjct: 1 MKFLDLFAGIGGFRLGMESA----GHKCIGFCEIDKFARESYKAIHNTKGEIELHDITAV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I D++ GFPCQ FS AG
Sbjct: 57 SDESIRGIGSVDIICGGFPCQAFSIAG 83
>gi|319412045|emb|CBY91978.1| C-5-cytosine-specific DNA methylase [Streptococcus pneumoniae]
Length = 452
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
++ DLF GIGG RL +E EC EI+ ++ K+Y + F DI +
Sbjct: 1 MRFIDLFSGIGGFRLGME----SVRHECIGFCEIDKFARKSYKSFFQTEGEIEFRDIRDV 56
Query: 60 KTQDIPD----HDVLLAGFPCQPFSQAG 83
+ DV+ GFPCQ FS AG
Sbjct: 57 SDDEFKKLRGKVDVICGGFPCQAFSIAG 84
>gi|293371782|ref|ZP_06618192.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CMC
3f]
gi|292633234|gb|EFF51805.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CMC
3f]
Length = 161
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+KI LF G GG+ L E+ + +++E + KTY+ N NT+ I I
Sbjct: 1 MKIVSLFAGAGGLDLGFERA----GFDIVWANEYDKDIWKTYEKNHSNTILDKRSITDIP 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
T DIP+ D ++ G PCQ +S+AG
Sbjct: 57 TTDIPECDGIIGGPPCQSWSEAG 79
>gi|161869727|ref|YP_001598894.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
meningitidis 053442]
gi|161595280|gb|ABX72940.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
meningitidis 053442]
Length = 374
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I
Sbjct: 17 KILSLFSGCGGLDLGFHQA----GYETVWANDFSHWACESFRKNIGDVIVEGDIEQIDPN 72
Query: 63 DI--PDHDVLLAGFPCQPFSQ 81
+ PD D++L GFPCQ FS
Sbjct: 73 NPTIPDCDIILGGFPCQDFSM 93
>gi|282851890|ref|ZP_06261250.1| modification methylase Rho11sI family protein [Lactobacillus
gasseri 224-1]
gi|282556899|gb|EFB62501.1| modification methylase Rho11sI family protein [Lactobacillus
gasseri 224-1]
Length = 343
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
+ D F GIGG R LE+ +C E + ++ + DI ++
Sbjct: 1 MNFIDFFAGIGGFRSGLEKA----GHKCVGFVEFDKFARKSYQAMYDTKGEFTGYDIRQV 56
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +D+P D+ G PCQ S AG
Sbjct: 57 RGKDLPKADIWTFGSPCQDVSIAG 80
>gi|238855331|ref|ZP_04645644.1| methyl transferase [Lactobacillus jensenii 269-3]
gi|282933726|ref|ZP_06339082.1| Phi-3T prophage-derived modification methylase Phi3TI
[Lactobacillus jensenii 208-1]
gi|313472896|ref|ZP_07813384.1| type II DNA modification methyltransferase [Lactobacillus
jensenii 1153]
gi|238832031|gb|EEQ24355.1| methyl transferase [Lactobacillus jensenii 269-3]
gi|239528918|gb|EEQ67919.1| type II DNA modification methyltransferase [Lactobacillus
jensenii 1153]
gi|281302166|gb|EFA94412.1| Phi-3T prophage-derived modification methylase Phi3TI
[Lactobacillus jensenii 208-1]
Length = 343
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
+ D F GIGG R LE+ +C E + ++ + DI ++
Sbjct: 1 MNFIDFFAGIGGFRSGLEKA----GHKCVGFVEFDKFARKSYQAMYDTKGEFTGYDIRQV 56
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +D+P D+ G PCQ S AG
Sbjct: 57 RGKDLPTADIWTFGSPCQDVSIAG 80
>gi|210617281|ref|ZP_03291507.1| hypothetical protein CLONEX_03729 [Clostridium nexile DSM 1787]
gi|210149385|gb|EEA80394.1| hypothetical protein CLONEX_03729 [Clostridium nexile DSM 1787]
Length = 455
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
++ DLF GIGG R L + C E++ Y+ K Y+ + D I
Sbjct: 32 IQFFDLFSGIGGFREGLRRAG---GFTCVGHCEVDTYADKNYRLLFDTEGEWYCSDARTI 88
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ + +PD D+L AGFPCQ FS AG
Sbjct: 89 EPERMPDFDLLCAGFPCQAFSIAG 112
>gi|331085742|ref|ZP_08334825.1| hypothetical protein HMPREF0987_01128 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406665|gb|EGG86170.1| hypothetical protein HMPREF0987_01128 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 425
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
L DL GIGG RL LE +C E + ++ + D+ K+
Sbjct: 4 LTFLDLCSGIGGFRLGLESA----GHKCVGYCEYDKFARASYEAMYDTEGEWKADDVTKL 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K D+P D+ GFPCQ S AG
Sbjct: 60 KPSDVPRADIWCFGFPCQDISVAG 83
>gi|324323924|gb|ADY24967.1| modification methylase SPRI [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 290
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
L DLF G+GG R +EQ +C EI+P++ K+Y DI K+
Sbjct: 3 LTFLDLFSGVGGFRFGMEQA----GHKCLGYVEIDPHARKSYEAIHQTEGEWSAHDITKV 58
Query: 60 KTQD----IPDHDVLLAGFPCQPFSQAG 83
++ DV+ GFPCQ FS AG
Sbjct: 59 SNKELRRFRGKVDVICGGFPCQAFSIAG 86
>gi|85709931|ref|ZP_01040996.1| Type II restriction-modification system methylation subunit
[Erythrobacter sp. NAP1]
gi|85688641|gb|EAQ28645.1| Type II restriction-modification system methylation subunit
[Erythrobacter sp. NAP1]
Length = 370
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGG+R+ + EC FSSE + ++ TY+ NF + DI KI
Sbjct: 22 FTFIDLFAGIGGMRIPF----DELGGECTFSSEWDKFAQDTYELNFGHRPNG-DITKIDA 76
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++ HD+LL GFPCQ FS AG
Sbjct: 77 SEVGAHDILLGGFPCQAFSNAG 98
>gi|254282099|ref|ZP_04957067.1| modification methylase SsoII [gamma proteobacterium NOR51-B]
gi|219678302|gb|EED34651.1| modification methylase SsoII [gamma proteobacterium NOR51-B]
Length = 356
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL LE + F+SE + + + Y N + DI K
Sbjct: 28 FKFIDLFAGIGGFRLGLE----AQGGRSVFASEWDKTAKEYYFRNHGDYPFG-DINKFTG 82
Query: 62 QD---------IPDHDVLLAGFPCQPFSQAG 83
+ +PDHD+L GFPCQPFS AG
Sbjct: 83 EHLSDEQVDQLVPDHDLLAGGFPCQPFSIAG 113
>gi|169829195|ref|YP_001699353.1| modification methylase SPRI [Lysinibacillus sphaericus C3-41]
gi|168993683|gb|ACA41223.1| Modification methylase SPRI [Lysinibacillus sphaericus C3-41]
Length = 418
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
++ D F GIGG RL +EQ C E + ++ K+Y N DI +
Sbjct: 1 MQFLDFFAGIGGFRLGMEQA----GHTCAGYVEWDKFARKSYEAIHNTEGEWTAHDITTV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
++ D++ GFPCQ FS AG
Sbjct: 57 SDEEFSKFRGTVDIICGGFPCQAFSVAG 84
>gi|240117500|ref|ZP_04731562.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae PID1]
gi|268603200|ref|ZP_06137367.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID1]
gi|268587331|gb|EEZ52007.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID1]
Length = 374
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I
Sbjct: 17 KILSLFSGCGGLDLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 72
Query: 63 DI--PDHDVLLAGFPCQPFSQ 81
D PD D++L GFPCQ FS
Sbjct: 73 DPTIPDCDIILGGFPCQDFSM 93
>gi|1127162|pdb|1DCT|A Chain A, Dna (Cytosine-5) Methylase From Haeiii Covalently Bound
To Dna
gi|1127163|pdb|1DCT|B Chain B, Dna (Cytosine-5) Methylase From Haeiii Covalently Bound
To Dna
Length = 324
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF G GG+ L ++ ++E + KTY++N LI GDI+KI +
Sbjct: 1 MNLISLFSGAGGLDLGFQKA----GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISS 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ P D ++ G PCQ +S+ G
Sbjct: 57 DEFPKCDGIIGGPPCQSWSEGG 78
>gi|314055098|ref|YP_004063436.1| cytosine-specific methyltransferase [Ostreococcus tauri virus 2]
gi|313574989|emb|CBI70002.1| cytosine-specific methyltransferase [Ostreococcus tauri virus 2]
Length = 315
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLF G G LE T EC F+++ + S + Y N +T + GD+ I +
Sbjct: 4 RFIDLFAGTGAFTYALENTGK---YECVFANDFDKSSKEIYTNNHDSTFVLGDLNDILVE 60
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
DIP+HD+L GFPCQPFS AG
Sbjct: 61 DIPEHDLLCGGFPCQPFSIAG 81
>gi|124004276|ref|ZP_01689122.1| site-specific DNA-methyltransferase [Microscilla marina ATCC
23134]
gi|123990346|gb|EAY29845.1| site-specific DNA-methyltransferase [Microscilla marina ATCC
23134]
Length = 391
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-K 60
++ LF G+GG L E F+ E NP+ + +P+T + DI +
Sbjct: 1 MRHASLFSGMGGFDLAAE----RMGWVNVFTVENNPFCQTILRHYWPDTTHYEDIRQTDF 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
T D+L GFPCQPFSQAG
Sbjct: 57 TPHYGQIDLLTGGFPCQPFSQAG 79
>gi|59800809|ref|YP_207521.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae FA 1090]
gi|254493277|ref|ZP_05106448.1| modification methylase NgoFVII [Neisseria gonorrhoeae 1291]
gi|260440968|ref|ZP_05794784.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae DGI2]
gi|268594414|ref|ZP_06128581.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae 35/02]
gi|268596411|ref|ZP_06130578.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae FA19]
gi|268598542|ref|ZP_06132709.1| modification methylase NgoFVII [Neisseria gonorrhoeae MS11]
gi|268600894|ref|ZP_06135061.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID18]
gi|268681681|ref|ZP_06148543.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID332]
gi|268683908|ref|ZP_06150770.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-92-679]
gi|291044296|ref|ZP_06570005.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae DGI2]
gi|293399487|ref|ZP_06643640.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|59717704|gb|AAW89109.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae FA 1090]
gi|226512317|gb|EEH61662.1| modification methylase NgoFVII [Neisseria gonorrhoeae 1291]
gi|268547803|gb|EEZ43221.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae 35/02]
gi|268550199|gb|EEZ45218.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae FA19]
gi|268582673|gb|EEZ47349.1| modification methylase NgoFVII [Neisseria gonorrhoeae MS11]
gi|268585025|gb|EEZ49701.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID18]
gi|268621965|gb|EEZ54365.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID332]
gi|268624192|gb|EEZ56592.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-92-679]
gi|291011190|gb|EFE03186.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae DGI2]
gi|291610056|gb|EFF39178.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
Length = 374
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I
Sbjct: 17 KILSLFSGCGGLDLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 72
Query: 63 DI--PDHDVLLAGFPCQPFSQ 81
D PD D++L GFPCQ FS
Sbjct: 73 DPTIPDCDIILGGFPCQDFSM 93
>gi|86142380|ref|ZP_01060890.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella
blandensis MED217]
gi|85831132|gb|EAQ49589.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella
blandensis MED217]
Length = 332
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
LK DLF G GG L +++ + FS +I P +TY NFP+ I DI +K
Sbjct: 5 LKYIDLFSGAGGFSLGF----DNKGFQNVFSVDIEPSFCETYNHNFPSHNLIHKDICDVK 60
Query: 61 TQDIPD------HDVLLAGFPCQPFSQAG 83
++ DV++ G PCQ FS AG
Sbjct: 61 DAELKYLKEYDEIDVVIGGPPCQGFSIAG 89
>gi|332162719|ref|YP_004299296.1| Cytosine-specific methyltransferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325666949|gb|ADZ43593.1| Cytosine-specific methyltransferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330859459|emb|CBX69803.1| hypothetical protein YEW_FM23370 [Yersinia enterocolitica W22703]
Length = 365
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTF-------NHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54
K+ LF G GG+ L F E +++E NP +VKTY+ NF + ++ G
Sbjct: 60 YKLISLFSGCGGMDLGFCGDFSVLNKKYKKTKFEIIWANEFNPNAVKTYKKNFSHNIVEG 119
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI ++ + DVL+ GFPCQ S G
Sbjct: 120 DIWELIDSVPTECDVLIGGFPCQDISING 148
>gi|296114735|ref|ZP_06833385.1| DNA-cytosine methyltransferase [Gluconacetobacter hansenii ATCC
23769]
gi|295978659|gb|EFG85387.1| DNA-cytosine methyltransferase [Gluconacetobacter hansenii ATCC
23769]
Length = 419
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKI- 59
+ DLF GIGG+R+ E C F+SE + +S +TY N I GDI
Sbjct: 70 FRFIDLFAGIGGLRIGFE----EIGGRCVFTSEWDRFSRQTYALNYPDNHEISGDIRPFA 125
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83
IP+HDVLLAGFPCQPFS AG
Sbjct: 126 EDPSLIPEHDVLLAGFPCQPFSIAG 150
>gi|291530357|emb|CBK95942.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3]
Length = 317
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+K+ LF GIGGI L EQ + +++EI+ + KTYQ NFP T I DI K+
Sbjct: 1 MKLGSLFAGIGGIELGFEQ----VGFDIVWANEIDTDACKTYQFNFPKTKLIKSDIRKVN 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
++ D++ AGFPCQPFS G
Sbjct: 57 FSELEKIDIITAGFPCQPFSVCG 79
>gi|296126993|ref|YP_003634245.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563]
gi|296018809|gb|ADG72046.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563]
Length = 324
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
DLF GIGG R+ LE +C +S+E + ++ ++Y NF + DI KI +
Sbjct: 13 TFIDLFAGIGGFRIALE----SLGAKCVYSNEWDKFAKESYYKNFGDIPDD-DITKIDEK 67
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
IP HD+L AGFPCQ FS +G
Sbjct: 68 LIPAHDILCAGFPCQAFSISG 88
>gi|288904476|ref|YP_003429697.1| DNA methylase [Streptococcus gallolyticus UCN34]
gi|288731201|emb|CBI12749.1| Putative DNA methylase [Streptococcus gallolyticus UCN34]
Length = 366
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+K DLF GIGG R+ LE C EI+P++ +Y+ + ++
Sbjct: 1 MKFFDLFAGIGGFRMGLE----SLGHRCVGFCEIDPFARASYKVIYDTEGDIEFHDIRNV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I D++ GFPCQ FS AG
Sbjct: 57 TTDAIRGIGRVDIICGGFPCQAFSIAG 83
>gi|293371777|ref|ZP_06618187.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC
3f]
gi|292633229|gb|EFF51800.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC
3f]
Length = 459
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+K+ F G GG+ L EQ E +++E + +TYQ N PNT DI +K
Sbjct: 1 MKVASFFAGCGGLDLGFEQA----GYEVIWANEFDEGIHETYQFNHPNTYLCKSDIRTLK 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPD D + G PCQ +S+ G
Sbjct: 57 AADIPDCDGFIGGPPCQSWSEGG 79
>gi|312873586|ref|ZP_07733633.1| modification methylase BanI [Lactobacillus iners LEAF 2052A-d]
gi|311090839|gb|EFQ49236.1| modification methylase BanI [Lactobacillus iners LEAF 2052A-d]
Length = 487
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+ DLF G+GGIRL E+ +C FSS+I S T DI KI
Sbjct: 70 ITYIDLFSGLGGIRLGFEEALTDYGLTGKCVFSSDI-KESAITAYKTNFGENPKCDITKI 128
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
++P+ D LLAGFPCQ FSQAG
Sbjct: 129 NPTNLPNFDFLLAGFPCQAFSQAG 152
>gi|159025987|emb|CAO87894.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 329
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ D + GIGG RL LEQ +C FS+E NP VKTY NF ++ D+ +
Sbjct: 1 MTFADFYAGIGGFRLGLEQ----IGWQCVFSNENNPDCVKTYNHNFHESIKPQDVEALIP 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+PD +V GFPCQPFS+AG
Sbjct: 57 SLLPDFEVFCGGFPCQPFSRAG 78
>gi|11386930|sp|Q59606|MTF7_NEIGO RecName: Full=Modification methylase NgoFVII; Short=M.NgoFVII;
AltName: Full=Cytosine-specific methyltransferase
NgoFVII; Short=M.NgoVII
gi|1165245|gb|AAA86270.1| M.NgoVII [Neisseria gonorrhoeae]
Length = 374
Score = 84.6 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I
Sbjct: 17 KILSLFSGCGGLDLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 72
Query: 63 DI--PDHDVLLAGFPCQPFSQ 81
D PD D++L GFPCQ FS
Sbjct: 73 DPTIPDCDIILGGFPCQDFSM 93
>gi|325285907|ref|YP_004261697.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489]
gi|324321361|gb|ADY28826.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489]
Length = 414
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
K+ +LF G GG+ + LE+ ++C +EI+ ++ +T + N P+ + GDI
Sbjct: 75 FKVLELFAGAGGLAVGLEKA----GIKCVALNEIDKWACQTLRENRPHWNVLEGDIKSFN 130
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+ + D++ GFPCQ FS AG
Sbjct: 131 FSEYNNQVDIVTGGFPCQAFSYAG 154
>gi|168335325|ref|ZP_02693422.1| DNA-cytosine methyltransferase [Epulopiscium sp. 'N.t. morphotype
B']
Length = 324
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ LF G GG+ L E+ E ++E + TY+ N LI GDI+KI +
Sbjct: 1 MRLISLFAGAGGLDLGFEKA----GYEIAAANEYDKTIWATYEKNHKGPLIKGDISKIPS 56
Query: 62 QDIPD-HDVLLAGFPCQPFSQAG 83
D PD D ++ G PCQ +S AG
Sbjct: 57 ADFPDGIDGIIGGPPCQSWSAAG 79
>gi|238793797|ref|ZP_04637418.1| Cytosine-specific methyltransferase [Yersinia intermedia ATCC
29909]
gi|238726861|gb|EEQ18394.1| Cytosine-specific methyltransferase [Yersinia intermedia ATCC
29909]
Length = 365
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTF-------NHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54
K+ LF G GG+ L F E +++E NP +VKTY+ NF + ++ G
Sbjct: 60 YKLISLFSGCGGMDLGFCGNFSFLNKEYKKTKFEIIWANEFNPNAVKTYKKNFSHNIVEG 119
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI ++ + DVL+ GFPCQ S G
Sbjct: 120 DIWELIDSVPTECDVLIGGFPCQDISING 148
>gi|160931938|ref|ZP_02079330.1| hypothetical protein CLOLEP_00771 [Clostridium leptum DSM 753]
gi|156868980|gb|EDO62352.1| hypothetical protein CLOLEP_00771 [Clostridium leptum DSM 753]
Length = 379
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
++ DLF GIGG R L Q C EI+ ++ ++Y+ + DI K
Sbjct: 6 IRYLDLFSGIGGFREGLTQAG---GFTCAGHCEIDQHADRSYRALFDTEGEWFCDDIRKA 62
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+++PD ++L GFPCQ FS AG
Sbjct: 63 DPEELPDVELLCGGFPCQAFSIAG 86
>gi|268686152|ref|ZP_06153014.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-93-1035]
gi|268626436|gb|EEZ58836.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-93-1035]
Length = 374
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I
Sbjct: 17 KILSLFSGCGGLDLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 72
Query: 63 DI--PDHDVLLAGFPCQPFSQ 81
D PD D++L GFPCQ FS
Sbjct: 73 DPTIPDCDIILGGFPCQDFSM 93
>gi|114571596|ref|YP_758276.1| DNA-cytosine methyltransferase [Maricaulis maris MCS10]
gi|114342058|gb|ABI67338.1| DNA-cytosine methyltransferase [Maricaulis maris MCS10]
Length = 406
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGG+RL E +C F+SE + +S +TY+ANF + I+
Sbjct: 66 FRFIDLFAGIGGLRLGFE----AIGGKCVFTSEWDVHSQRTYRANFLDDDSHTFAGDIRP 121
Query: 62 Q-----DIPDHDVLLAGFPCQPFSQAG 83
+P+HDVLLAGFPCQPFS AG
Sbjct: 122 YGTDPSKVPEHDVLLAGFPCQPFSLAG 148
>gi|170718749|ref|YP_001783936.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336]
gi|168826878|gb|ACA32249.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336]
Length = 372
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I
Sbjct: 16 KILSLFSGCGGLDLGFHQA----GYETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 71
Query: 63 DI--PDHDVLLAGFPCQPFSQ 81
D PD D++L GFPCQ FS
Sbjct: 72 DPTIPDCDIILGGFPCQDFSM 92
>gi|319897026|ref|YP_004135221.1| modification methylase haeiii [Haemophilus influenzae F3031]
gi|317432530|emb|CBY80890.1| Modification methylase HaeIII [Haemophilus influenzae F3031]
Length = 330
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF G GG+ L ++ ++E + KTY++N LI GDI+KI +
Sbjct: 1 MNLISLFSGAGGLDLGFQKA----GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISS 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ P D ++ G PCQ +S+ G
Sbjct: 57 DEFPKCDGIIGGPPCQSWSEGG 78
>gi|86136173|ref|ZP_01054752.1| hypothetical protein MED193_18659 [Roseobacter sp. MED193]
gi|85827047|gb|EAQ47243.1| hypothetical protein MED193_18659 [Roseobacter sp. MED193]
Length = 399
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/83 (50%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
DLF GIGG+R+ E C F+SE N +S +TY ANF + GDI +I
Sbjct: 50 FSFIDLFAGIGGLRVGFEAA----GGTCVFTSEWNRFSQETYSANFGDEHPLSGDITEIS 105
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+IP HDVLLAGFPCQPFS AG
Sbjct: 106 EAEIPAHDVLLAGFPCQPFSIAG 128
>gi|261337441|ref|ZP_05965325.1| modification methylase HpaII [Bifidobacterium gallicum DSM 20093]
gi|270277829|gb|EFA23683.1| modification methylase HpaII [Bifidobacterium gallicum DSM 20093]
Length = 442
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
+ DLF GIGGIR H FSSE N +S + GDI ++
Sbjct: 73 FRTIDLFAGIGGIRRGFATAGGHA----VFSSEWNEFSTRTYRTNYGFAETMAGDITQVD 128
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPD DV+LAGFPCQPFS AG
Sbjct: 129 ANDIPDCDVVLAGFPCQPFSLAG 151
>gi|319776343|ref|YP_004138831.1| Modification methylase HaeIII [Haemophilus influenzae F3047]
gi|127460|sp|P20589|MTH3_HAEAE RecName: Full=Modification methylase HaeIII; Short=M.HaeIII;
AltName: Full=Cytosine-specific methyltransferase
HaeIII
gi|148915|gb|AAA24970.1| methyltransferase [Haemophilus aegyptius]
gi|2961233|gb|AAC05696.1| HaeIII DNA modification methyltransferase [Haemophilus influenzae
biotype aegyptius]
gi|317450934|emb|CBY87160.1| Modification methylase HaeIII [Haemophilus influenzae F3047]
Length = 330
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF G GG+ L ++ ++E + KTY++N LI GDI+KI +
Sbjct: 1 MNLISLFSGAGGLDLGFQKA----GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISS 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ P D ++ G PCQ +S+ G
Sbjct: 57 DEFPKCDGIIGGPPCQSWSEGG 78
>gi|113478170|ref|YP_724231.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
gi|110169218|gb|ABG53758.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
Length = 379
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI LF G GG+ L T + ++ + + Y+ +T++ N N + I I
Sbjct: 16 KIISLFSGCGGMDLPFHYT----GFKLVWAIDSDLYACRTFRRNISNIIENNQIENINIA 71
Query: 63 DIPDHDVLLAGFPCQPFSQ 81
++P+ D+++ GFPCQ FS
Sbjct: 72 EVPEADLIIGGFPCQDFSM 90
>gi|327439466|dbj|BAK15831.1| site-specific DNA methylase [Solibacillus silvestris StLB046]
Length = 286
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL +E + EC E + Y+ K+Y N DI I
Sbjct: 1 MKFLDLFAGIGGFRLGMEMADH----ECIGYVEWDEYARKSYEAIHNTNGEWTEHDITGI 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
+ + DV+ GFPCQ FS AG
Sbjct: 57 TDEQWREFKGEIDVICGGFPCQAFSVAG 84
>gi|159029905|emb|CAO90959.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 346
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L D + GIGG RL LEQ +C FS+E NP VKTY NF ++ D+ +
Sbjct: 18 LTFADFYAGIGGFRLGLEQ----IGWQCVFSNENNPDCVKTYNHNFHESIKPQDVEALIP 73
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+PD +V GFPCQPFS+AG
Sbjct: 74 SLLPDFEVFCGGFPCQPFSRAG 95
>gi|294651999|ref|ZP_06729281.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter haemolyticus
ATCC 19194]
gi|292822115|gb|EFF81036.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter haemolyticus
ATCC 19194]
Length = 336
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
LKI LF G GG+ L ++ F++E + TY+ N PNT I +IK
Sbjct: 3 LKIVSLFSGAGGLDLGFQKA----GFNITFANEFDKDIWATYEYNHPNTHLDKRSITEIK 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
++P+ D ++ G PCQ +S+ G
Sbjct: 59 ENEVPECDGIIGGPPCQSWSEGG 81
>gi|15901190|ref|NP_345794.1| type II DNA modification methyltransferase Spn5252IP
[Streptococcus pneumoniae TIGR4]
gi|14972819|gb|AAK75434.1| type II DNA modification methyltransferase Spn5252IP
[Streptococcus pneumoniae TIGR4]
Length = 407
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAK 58
M+ + DLF GIGG R+ +E + EC EI+ ++ K+Y + F DI
Sbjct: 1 MIWVLDLFAGIGGFRMGME----AQGHECLGFCEIDKFARKSYKSIFQTEGEIEFHDIRD 56
Query: 59 IKTQDIPD----HDVLLAGFPCQPFSQAG 83
+ + DV+ GFPCQ FS AG
Sbjct: 57 VSDDEFKKLRGKVDVICGGFPCQAFSIAG 85
>gi|294787738|ref|ZP_06752982.1| modification methylase NgoPII [Simonsiella muelleri ATCC 29453]
gi|294484031|gb|EFG31714.1| modification methylase NgoPII [Simonsiella muelleri ATCC 29453]
Length = 331
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+K+ LF G GG+ L E+ E ++E + TY+AN P T I GDI I+
Sbjct: 1 MKVISLFSGCGGLDLGFERA----GFEIPVANEYDKTIWATYKANHPKTQLIEGDIRHIQ 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+ PD D ++ G PCQ +S+AG
Sbjct: 57 EINFPDEIDGIIGGPPCQSWSEAG 80
>gi|322514130|ref|ZP_08067198.1| modification methylase NgoPII [Actinobacillus ureae ATCC 25976]
gi|322120016|gb|EFX92002.1| modification methylase NgoPII [Actinobacillus ureae ATCC 25976]
Length = 356
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+K+ LFCG GG+ L E+ E ++E + T++AN P T I GDI IK
Sbjct: 1 MKVISLFCGCGGLDLGFEKA----GFEVPVANEYDKTIWATFKANHPKTRLIEGDIRNIK 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+D PD D ++ G PCQ +S+AG
Sbjct: 57 EEDFPDEIDGIIGGPPCQSWSEAG 80
>gi|302347057|ref|YP_003815355.1| putative modification methylase HhaI [Prevotella melaninogenica
ATCC 25845]
gi|302150379|gb|ADK96640.1| putative modification methylase HhaI [Prevotella melaninogenica
ATCC 25845]
Length = 453
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ DLF G+GG L L +C FSSE+ K YQ N+P I GDI KI
Sbjct: 7 LQFIDLFAGLGGFHLALS----KLGCKCVFSSELKEDLRKLYQINYPGVRIEGDITKIAP 62
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIP HD++ AGFPCQPFSQAG
Sbjct: 63 KDIPAHDIICAGFPCQPFSQAG 84
>gi|323484104|ref|ZP_08089474.1| hypothetical protein HMPREF9474_01225 [Clostridium symbiosum
WAL-14163]
gi|323402546|gb|EGA94874.1| hypothetical protein HMPREF9474_01225 [Clostridium symbiosum
WAL-14163]
Length = 430
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
L DL GIGG RL LE +C E + Y+ + D+ K+
Sbjct: 4 LTFLDLCSGIGGFRLGLEAA----GHKCIGYCEYDKYARASYEAMYDAKGEWKADDVTKL 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K DIP D+ GFPCQ S AG
Sbjct: 60 KPGDIPYADIWTFGFPCQDISIAG 83
>gi|315611977|ref|ZP_07886895.1| C-5 cytosine-specific DNA methylase [Streptococcus sanguinis ATCC
49296]
gi|315315966|gb|EFU64000.1| C-5 cytosine-specific DNA methylase [Streptococcus sanguinis ATCC
49296]
Length = 359
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56
+K DLF GIGG RL +E EC EI+ ++ +Y+A +
Sbjct: 1 MKFLDLFAGIGGFRLGMESA----GHECIGFCEIDKFARASYKAIHDTKGEIELHDITAV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I D++ GFPCQ FS AG
Sbjct: 57 SDESIRRIGRVDIICGGFPCQAFSIAG 83
>gi|283797105|ref|ZP_06346258.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. M62/1]
gi|291075522|gb|EFE12886.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. M62/1]
Length = 535
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML + LF GIGG L H + ++SEI P+ ++ + FP+ GDI K+
Sbjct: 1 MLTLGSLFDGIGGFPL----AGIHNGITPLWASEIEPFPIQVTKLRFPDMEHVGDITKLD 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+P DV+ G PCQ S AG
Sbjct: 57 GGKLPPVDVICGGSPCQDLSVAG 79
>gi|300727022|ref|ZP_07060441.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Prevotella
bryantii B14]
gi|299775566|gb|EFI72157.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Prevotella
bryantii B14]
Length = 446
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYS-VKTYQANFPNTLIFGDIA 57
M+ DLF G+GGIR+ Q N +E C F+SEI + +I DI
Sbjct: 1 MIDYIDLFAGLGGIRIGFTQAANELGLESRCVFTSEIKDSALCALNHNFPGENIIKRDIT 60
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
K+ + +IP ++LL GFPCQ FS AG
Sbjct: 61 KVASDEIPHFNILLGGFPCQAFSFAG 86
>gi|314942783|ref|ZP_07849602.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium
TX0133C]
gi|314953681|ref|ZP_07856564.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium
TX0133A]
gi|313594323|gb|EFR73168.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium
TX0133A]
gi|313598474|gb|EFR77319.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium
TX0133C]
Length = 380
Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+ DLF GIGG L +EQ +C EI+ ++ ++Y+A +
Sbjct: 1 MTFLDLFAGIGGFCLGMEQA----GHQCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q + D+L GFPCQ FS AG
Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83
>gi|228474527|ref|ZP_04059258.1| site-specific DNA methylase [Staphylococcus hominis SK119]
gi|228271190|gb|EEK12558.1| site-specific DNA methylase [Staphylococcus hominis SK119]
Length = 414
Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61
+ LF G GG+ L ++ ++++ +V TY+ N + +++GDI KI
Sbjct: 5 NVISLFAGAGGMDLGFKKA----GFNIIWANDFEKDAVTTYKNNIGDHIVYGDITKIDIK 60
Query: 62 ---QDIPDHDVLLAGFPCQPFSQ 81
+ + D+++ GFPCQ FS
Sbjct: 61 NELPNEEEIDLVIGGFPCQGFSV 83
>gi|166366204|ref|YP_001658477.1| DNA cytosine methylase [Microcystis aeruginosa NIES-843]
gi|166088577|dbj|BAG03285.1| DNA cytosine methylase [Microcystis aeruginosa NIES-843]
Length = 346
Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L D + GIGG RL LEQ +C FS+E NP VKTY NF ++ D+ +
Sbjct: 18 LTFADFYAGIGGFRLGLEQ----IGWQCVFSNENNPDCVKTYNHNFHESIKPQDVEALIP 73
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+PD +V GFPCQPFS+AG
Sbjct: 74 SLLPDFEVFCGGFPCQPFSRAG 95
>gi|268604583|ref|ZP_06138750.1| cytosine methylase [Neisseria gonorrhoeae PID1]
gi|268588714|gb|EEZ53390.1| cytosine methylase [Neisseria gonorrhoeae PID1]
Length = 341
Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+KI LF G GG+ L E+ E ++E + T++AN P T I GDI KIK
Sbjct: 12 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 67
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+D P+ D ++ G PCQ +S+AG
Sbjct: 68 EEDFPEEIDGIIGGPPCQSWSEAG 91
>gi|1399076|gb|AAB03209.1| NgoII cytosine methylase M.NgoII [Neisseria gonorrhoeae]
Length = 341
Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+KI LF G GG+ L E+ E ++E + T++AN P T I GDI KIK
Sbjct: 12 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 67
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+D P+ D ++ G PCQ +S+AG
Sbjct: 68 EEDFPEEIDGIIGGPPCQSWSEAG 91
>gi|313677762|ref|YP_004055758.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
gi|312944460|gb|ADR23650.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
Length = 378
Score = 83.4 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
LK FCG GG+ L L FN+ N E ++++ + Y+ + Y +NF + I
Sbjct: 10 LKAASFFCGCGGMDLGLVGNFNYLNGNYSSLPFEIVYANDFDTYATEIYNSNFEHKCITK 69
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
DI + +IP+HD+LL GFPCQ FS
Sbjct: 70 DIKDVSMSEIPEHDILLGGFPCQSFSI 96
>gi|294646710|ref|ZP_06724334.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CC 2a]
gi|294807186|ref|ZP_06766001.1| DNA (cytosine-5-)-methyltransferase [Bacteroides xylanisolvens SD
CC 1b]
gi|292637950|gb|EFF56344.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CC 2a]
gi|294445609|gb|EFG14261.1| DNA (cytosine-5-)-methyltransferase [Bacteroides xylanisolvens SD
CC 1b]
Length = 445
Score = 83.4 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF G+GG RL ++ + +C FSSE N Y+ KTY ANF ++
Sbjct: 113 FTFIDLFAGMGGFRLAMQ----AQGGKCVFSSEWNKYAQKTYLANFGEMPFGDITKEVTK 168
Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83
IP + D+L AGFPCQPFS AG
Sbjct: 169 SYIPQYFDILCAGFPCQPFSIAG 191
>gi|294673665|ref|YP_003574281.1| prophage PRU01 DNA methylase, C-5 cytosine-specific family
[Prevotella ruminicola 23]
gi|294471747|gb|ADE81136.1| prophage PRU01, DNA methylase, C-5 cytosine-specific family
[Prevotella ruminicola 23]
Length = 330
Score = 83.4 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+K+ LF G GG+ L E+ E ++E +P +T++AN P T I GDI IK
Sbjct: 1 MKVISLFSGCGGLDLGFERA----GFEVPVANEFDPSIWETFEANHPKTKLIRGDIRNIK 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
D P D ++ G PCQ +S+AG
Sbjct: 57 ESDFPKDVDGIIGGPPCQSWSEAG 80
>gi|156933419|ref|YP_001437335.1| DNA cytosine methylase [Cronobacter sakazakii ATCC BAA-894]
gi|156531673|gb|ABU76499.1| hypothetical protein ESA_01237 [Cronobacter sakazakii ATCC BAA-894]
Length = 481
Score = 83.4 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ + + DI
Sbjct: 98 FRFIDLFAGIGGIRSGFEAA----GGQCVFTSEWNKHAVRTYKANWYCDPQQHQFNEDIR 153
Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83
+ IP HDVLLAGFPCQPFS AG
Sbjct: 154 DVTLSHKPEISDEAAAEHIRACIPQHDVLLAGFPCQPFSLAG 195
>gi|124009862|ref|ZP_01694529.1| site-specific DNA-methyltransferase [Microscilla marina ATCC
23134]
gi|123984098|gb|EAY24464.1| site-specific DNA-methyltransferase [Microscilla marina ATCC
23134]
Length = 353
Score = 83.4 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-K 60
++ LF G+GG L E F+ E NP+ + +P++ + DI +I
Sbjct: 1 MRHASLFSGLGGFDLAAE----RMGWVNVFTVENNPFCQTILRHYWPDSTHYEDIRQIDF 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ D+L GFPCQPFSQAG
Sbjct: 57 SPYYGQIDLLTGGFPCQPFSQAG 79
>gi|59802113|ref|YP_208825.1| DcmB [Neisseria gonorrhoeae FA 1090]
gi|268593822|ref|ZP_06127989.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria
gonorrhoeae 35/02]
gi|268597735|ref|ZP_06131902.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria
gonorrhoeae FA19]
gi|291042825|ref|ZP_06568566.1| site-specific DNA-methyltransferase M.NgoPII [Neisseria
gonorrhoeae DGI2]
gi|293398154|ref|ZP_06642359.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|44873|emb|CAA30038.1| unnamed protein product [Neisseria gonorrhoeae]
gi|44888|emb|CAA36888.1| NgoPII restriction and modification [Neisseria gonorrhoeae]
gi|293960|gb|AAA17019.1| cytosine methylase [Neisseria gonorrhoeae]
gi|59719008|gb|AAW90413.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria
gonorrhoeae FA 1090]
gi|268547211|gb|EEZ42629.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria
gonorrhoeae 35/02]
gi|268551523|gb|EEZ46542.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria
gonorrhoeae FA19]
gi|291013259|gb|EFE05225.1| site-specific DNA-methyltransferase M.NgoPII [Neisseria
gonorrhoeae DGI2]
gi|291611417|gb|EFF40487.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|227054|prf||1613419B NgoPII methylase
Length = 341
Score = 83.4 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+KI LF G GG+ L E+ E ++E + T++AN P T I GDI KIK
Sbjct: 12 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 67
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+D P+ D ++ G PCQ +S+AG
Sbjct: 68 EEDFPEEIDGIIGGPPCQSWSEAG 91
>gi|325294602|ref|YP_004281116.1| DNA-cytosine methyltransferase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065050|gb|ADY73057.1| DNA-cytosine methyltransferase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 342
Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
++I LF G GG+ L E ++++ + +TY NFP T D+ I
Sbjct: 1 MEIVSLFSGCGGLDLGFELA----GFSIVWANDNDKDVWETYTRNFPGTYLDKRDLRVIP 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPD ++ G PCQ +S+AG
Sbjct: 57 VSDIPDCVGIIGGPPCQSWSEAG 79
>gi|150026305|ref|YP_001297131.1| Type II modification methyltransferase HpaII [Flavobacterium
psychrophilum JIP02/86]
gi|149772846|emb|CAL44330.1| Type II modification methyltransferase HpaII [Flavobacterium
psychrophilum JIP02/86]
Length = 425
Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60
K DLF GIGG R+ ++ + +C F+SE + + KTY+AN+ +IK
Sbjct: 95 FKFVDLFAGIGGFRMAMQ----NLGGKCVFTSEWDKEAQKTYRANYGEVPFGDITKQQIK 150
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ D+L AGFPCQ FS AG
Sbjct: 151 DYIPSEFDLLCAGFPCQAFSIAG 173
>gi|53714966|ref|YP_100958.1| C-5 cytosine-specific DNA-methylase [Bacteroides fragilis YCH46]
gi|52217831|dbj|BAD50424.1| C-5 cytosine-specific DNA-methylase [Bacteroides fragilis YCH46]
Length = 431
Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF G+GG RL ++ + +C FSSE N Y+ KTY ANF ++
Sbjct: 113 FTFIDLFAGMGGFRLAMQ----AQGGKCVFSSEWNKYAQKTYLANFGEMPFGDITKEMTK 168
Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83
IP + DVL AGFPCQPFS AG
Sbjct: 169 SYIPRNFDVLCAGFPCQPFSIAG 191
>gi|300124212|gb|ADJ68008.1| M.BanII [Aneurinibacillus aneurinilyticus]
Length = 385
Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKI 59
+ LF G GG+ + + V+ ++EI+ Y+ N GDI +
Sbjct: 4 IYTGISLFSGAGGMDVGFKNA----GVKVLCANEIDKYASATYQANNPETKFKLGDIRDV 59
Query: 60 KT--QDIPDHDVLLAGFPCQPFSQAG 83
+ ++ + D++ G PCQ FS AG
Sbjct: 60 YSELKEFKNIDIIFGGPPCQGFSVAG 85
>gi|205374924|ref|ZP_03227716.1| DNA-cytosine methyltransferase [Bacillus coahuilensis m4-4]
Length = 323
Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ DLF G GG+ L + E + E ++ Y+ NF + + D++ +K
Sbjct: 1 MRVIDLFSGCGGMSLGFQNA----GFEIVSAFENWDEAIDIYRKNFQHPICKYDLSDVKD 56
Query: 62 QDIP---DHDVLLAGFPCQPFSQAG 83
+ + D+++ G PCQ +S AG
Sbjct: 57 YNDFSKLNPDIIIGGPPCQDYSSAG 81
>gi|127420|sp|P19888|MTBA_BACAR RecName: Full=Modification methylase BanI; Short=M.BanI; AltName:
Full=Cytosine-specific methyltransferase BanI
gi|216242|dbj|BAA00613.1| BanI modification methylase [Aneurinibacillus aneurinilyticus]
Length = 428
Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF GIGGIR+ E+ + EC SSEI+ + A GDI +I
Sbjct: 3 IKFVDLFAGIGGIRIGFERAAKRFELETECVLSSEIDKKAC-ETYALNFKEEPQGDIHEI 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ P+ D LLAGFPCQPFS AG
Sbjct: 62 TS--FPEFDFLLAGFPCQPFSYAG 83
>gi|172038109|ref|YP_001804610.1| putative modification methylase [Cyanothece sp. ATCC 51142]
gi|171699563|gb|ACB52544.1| putative modification methylase [Cyanothece sp. ATCC 51142]
Length = 344
Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE-------CFFSSEINPYSVKTYQANFPNTLIFG 54
LK DLFCGIGG R+ LE + ++ C FSS+I+P + K G
Sbjct: 16 LKYIDLFCGIGGFRIALESVCSQYRLKDKKIESICVFSSDIDPDA-KKNYEANFKEKPQG 74
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI KI + IP HD+LLAGFPCQPFS G
Sbjct: 75 DITKIPIESIPKHDLLLAGFPCQPFSICG 103
>gi|169823586|ref|YP_001691089.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328]
gi|167832206|dbj|BAG09121.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328]
Length = 330
Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF G GG+ L + ++E + +TY+ N+ LI DI +++
Sbjct: 1 MDLISLFSGAGGLDLGFIKA----GFNVLVANEYDKRIWETYEKNYETRLIKDDITNVRS 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++PD D L+ G PCQ +S+AG
Sbjct: 57 NELPDCDGLIGGPPCQSWSEAG 78
>gi|69244913|ref|ZP_00603103.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium DO]
gi|257883136|ref|ZP_05662789.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
1,231,502]
gi|257891884|ref|ZP_05671537.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
1,231,410]
gi|258616872|ref|ZP_05714642.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium DO]
gi|289567034|ref|ZP_06447433.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
D344SRF]
gi|293563825|ref|ZP_06678258.1| methyl transferase [Enterococcus faecium E1162]
gi|294619669|ref|ZP_06699086.1| methyl transferase [Enterococcus faecium E1679]
gi|68196079|gb|EAN10510.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium DO]
gi|257818794|gb|EEV46122.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
1,231,502]
gi|257828244|gb|EEV54870.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
1,231,410]
gi|289161170|gb|EFD09071.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
D344SRF]
gi|291594089|gb|EFF25546.1| methyl transferase [Enterococcus faecium E1679]
gi|291604195|gb|EFF33696.1| methyl transferase [Enterococcus faecium E1162]
Length = 380
Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+ DLF GIGG L +EQ +C EI+ ++ ++Y+A +
Sbjct: 1 MTFLDLFAGIGGFCLGMEQA----GHQCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q + D+L GFPCQ FS AG
Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83
>gi|153007575|ref|YP_001368790.1| DNA (cytosine-5-)-methyltransferase [Ochrobactrum anthropi ATCC
49188]
gi|151559463|gb|ABS12961.1| DNA (cytosine-5-)-methyltransferase [Ochrobactrum anthropi ATCC
49188]
Length = 283
Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
L++ DLF GIGG L LE+T E EI + + ++P + D+ ++
Sbjct: 4 LRVLDLFSGIGGFSLGLERTG---GFETVAFCEIEEFPRRVLAKHWPEVPCYHDVRELTA 60
Query: 61 ---TQDIPDHDVLLAGFPCQPFSQAG 83
D DV+ GFPCQ S AG
Sbjct: 61 AKLASDGIAIDVICGGFPCQDISTAG 86
>gi|269214273|ref|ZP_05986228.2| modification methylase NgoPII [Neisseria lactamica ATCC 23970]
gi|269210330|gb|EEZ76785.1| modification methylase NgoPII [Neisseria lactamica ATCC 23970]
Length = 330
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+KI LF G GG+ L E+ E ++E + T++AN P T I GDI KIK
Sbjct: 1 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 56
Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83
+D P+ D ++ G PCQ +S+AG
Sbjct: 57 EEDFPEGIDGIIGGPPCQSWSEAG 80
>gi|257870038|ref|ZP_05649691.1| DNA methylase [Enterococcus gallinarum EG2]
gi|257804202|gb|EEV33024.1| DNA methylase [Enterococcus gallinarum EG2]
Length = 401
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61
+ F G+GGI L EQT +++E + + TY N+P T DI ++ +
Sbjct: 14 TVAAFFSGVGGIELGFEQTGK---FRVVYANEFDKNAQITYAENYPQTPLDKRDIHEVDS 70
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+++P D+++ GFPCQ FS AG
Sbjct: 71 KEVPVSDLIVGGFPCQAFSIAG 92
>gi|187778292|ref|ZP_02994765.1| hypothetical protein CLOSPO_01884 [Clostridium sporogenes ATCC
15579]
gi|187771917|gb|EDU35719.1| hypothetical protein CLOSPO_01884 [Clostridium sporogenes ATCC
15579]
Length = 355
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K D+FCGIG +R+ EQ EC +S E + + K Y F GDI K +
Sbjct: 1 MKFIDMFCGIGTVRMGFEQA----GHECVYSIEWDKWKRKIYSIIFGGEPEGGDITKCRA 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++P D G PCQ FS AG
Sbjct: 57 NELPKSDCWCFGAPCQDFSVAG 78
>gi|154795669|gb|ABS86795.1| putative DNA methylase [Helicobacter cetorum]
Length = 381
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 15/93 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---------- 51
LK+ DLF G+GG E N ++EI+ +Y+ N NT+
Sbjct: 4 LKVLDLFAGVGGFSKGFENA----NFNIVLANEIDKEIAYSYKENHKNTIMIDSDINDFL 59
Query: 52 -IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++ + D DV++ G PCQ FS AG
Sbjct: 60 KHYHNLETKDKEKCKDIDVIIGGSPCQGFSMAG 92
>gi|127440|sp|P24600|MTD1_HERAU RecName: Full=Modification methylase HgiDI; Short=M.HgiDI;
AltName: Full=Cytosine-specific methyltransferase HgiDI
gi|43482|emb|CAA38938.1| methyltransferase [Herpetosiphon aurantiacus]
Length = 309
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K DLF G GG+ L Q E + + ++ TYQ NF + + D+A+I
Sbjct: 1 MKTIDLFAGCGGMSLGFMQA----GFEIVAAVDNWRPAINTYQQNFTHPIHELDLAQIDA 56
Query: 62 ----QDIPDHDVLLAGFPCQPFSQAG 83
++++ G PCQ FS AG
Sbjct: 57 AVSLIKTHSPELIIGGPPCQDFSSAG 82
>gi|305665822|ref|YP_003862109.1| DNA (cytosine-5-)-methyltransferase [Maribacter sp. HTCC2170]
gi|88710593|gb|EAR02825.1| DNA (cytosine-5-)-methyltransferase [Maribacter sp. HTCC2170]
Length = 408
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------TLIFGD 55
LK+ +LF G+GG RL LE T N E +S++ P + + + D
Sbjct: 4 LKVIELFAGVGGFRLGLENTG---NYEVVWSNQWEPATKAQHASMVYEARFGSENHSNQD 60
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
I+++ T +IPD D+L+ GFPCQ +S A
Sbjct: 61 ISEVPTGEIPDADILVGGFPCQDYSVA 87
>gi|160893669|ref|ZP_02074453.1| hypothetical protein CLOL250_01223 [Clostridium sp. L2-50]
gi|156864654|gb|EDO58085.1| hypothetical protein CLOL250_01223 [Clostridium sp. L2-50]
Length = 573
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+ + LF GIGG L H ++SEI P+ ++ + FP+ + GDI K+
Sbjct: 1 MMTLGSLFDGIGGFPL----AAVHCGGVPVWASEIEPFPMRVTKLRFPDMIHVGDITKLD 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+P DV+ G PCQ S AG
Sbjct: 57 GAKLPPVDVICGGSPCQDLSVAG 79
>gi|194099965|ref|YP_002003104.1| Modification methylase NgoPII [Neisseria gonorrhoeae NCCP11945]
gi|239997973|ref|ZP_04717897.1| Modification methylase NgoPII [Neisseria gonorrhoeae 35/02]
gi|240015049|ref|ZP_04721962.1| Modification methylase NgoPII [Neisseria gonorrhoeae DGI18]
gi|240017498|ref|ZP_04724038.1| Modification methylase NgoPII [Neisseria gonorrhoeae FA6140]
gi|240122118|ref|ZP_04735080.1| Modification methylase NgoPII [Neisseria gonorrhoeae PID24-1]
gi|240124411|ref|ZP_04737367.1| Modification methylase NgoPII [Neisseria gonorrhoeae PID332]
gi|240124717|ref|ZP_04737603.1| Modification methylase NgoPII [Neisseria gonorrhoeae SK-92-679]
gi|254494673|ref|ZP_05107844.1| modification methylase HaeIII [Neisseria gonorrhoeae 1291]
gi|260439589|ref|ZP_05793405.1| Modification methylase NgoPII [Neisseria gonorrhoeae DGI2]
gi|268599983|ref|ZP_06134150.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
MS11]
gi|268602320|ref|ZP_06136487.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
PID18]
gi|268683040|ref|ZP_06149902.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
PID332]
gi|268683292|ref|ZP_06150154.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
SK-92-679]
gi|268687469|ref|ZP_06154331.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
SK-93-1035]
gi|462655|sp|P08455|MTP2_NEIGO RecName: Full=Modification methylase NgoPII; Short=M.NgoPII;
AltName: Full=Cytosine-specific methyltransferase
NgoPII
gi|193935255|gb|ACF31079.1| Modification methylase NgoPII [Neisseria gonorrhoeae NCCP11945]
gi|226513713|gb|EEH63058.1| modification methylase HaeIII [Neisseria gonorrhoeae 1291]
gi|268584114|gb|EEZ48790.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
MS11]
gi|268586451|gb|EEZ51127.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
PID18]
gi|268623324|gb|EEZ55724.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
PID332]
gi|268623576|gb|EEZ55976.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
SK-92-679]
gi|268627753|gb|EEZ60153.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
SK-93-1035]
gi|317165417|gb|ADV08958.1| DcmB [Neisseria gonorrhoeae TCDC-NG08107]
Length = 330
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+KI LF G GG+ L E+ E ++E + T++AN P T I GDI KIK
Sbjct: 1 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+D P+ D ++ G PCQ +S+AG
Sbjct: 57 EEDFPEEIDGIIGGPPCQSWSEAG 80
>gi|313575370|emb|CBR26899.1| hypothetical protein [Streptococcus phage phi-SsUD.1]
Length = 419
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
L D F G+GG R LE +C E + ++ K+Y + DI I
Sbjct: 3 LTFLDFFAGVGGFRRGLELA----GFKCIGYCEKDKFARKSYEAMYDTKGEWFHDDITSI 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+P D+ AG PCQ S AG
Sbjct: 59 DPTQLPKADLWCAGSPCQNVSIAG 82
>gi|260598469|ref|YP_003211040.1| DNA cytosine methylase [Cronobacter turicensis z3032]
gi|260217646|emb|CBA31957.1| DNA-cytosine methyltransferase [Cronobacter turicensis z3032]
Length = 450
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 49/102 (48%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN+ DI
Sbjct: 67 FRFIDLFAGIGGIRSGFEAA----GGQCVFTSEWNKHAVRTYKANWYCDPQLHQFNEDIR 122
Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83
+ IP HDVLLAGFPCQPFS AG
Sbjct: 123 DVTLSHKPEVSDEAAADHIRACIPPHDVLLAGFPCQPFSLAG 164
>gi|294673411|ref|YP_003574027.1| C-5 cytosine-specific family DNA methylase [Prevotella ruminicola
23]
gi|294473101|gb|ADE82490.1| DNA methylase, C-5 cytosine-specific family [Prevotella
ruminicola 23]
Length = 448
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ DLFCG GG+ L ++ + + ++ Y ANF + +I D++ +
Sbjct: 1 MKVVDLFCGCGGLSLGFQKA----GFNILAAFDNWDDAITVYHANFKHPVIKQDLSNVDQ 56
Query: 62 Q----DIPDHDVLLAGFPCQPFSQAG 83
D+++ G PCQ FS AG
Sbjct: 57 TVEKVKKYKPDMIIGGPPCQDFSSAG 82
>gi|227431785|ref|ZP_03913812.1| possible DNA (cytosine-5-)-methyltransferase [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
gi|227352468|gb|EEJ42667.1| possible DNA (cytosine-5-)-methyltransferase [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
Length = 448
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL LE++ EI+ ++ ++Y N DI K+
Sbjct: 1 MKFLDLFSGIGGFRLGLERS----GHTPVGYVEIDKFARQSYQAMYNTDGEWTAEDINKV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
++ +++ GFPCQ FS AG
Sbjct: 57 TDEEWRKFNGTVELIAGGFPCQSFSIAG 84
>gi|313158099|gb|EFR57504.1| putative DNA (cytosine-5-)-methyltransferase [Alistipes sp. HGB5]
Length = 431
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY-QANFPNTLIFGDIAKIK 60
DLF G+GG RL ++ H C FSSE N Y+ +TY +IK
Sbjct: 110 FTFIDLFAGMGGFRLAMQ----HYGGRCVFSSEWNKYAQQTYLANFGEVPFGDITKDEIK 165
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+L AGFPCQPFS AG
Sbjct: 166 EYIPDGFDILCAGFPCQPFSIAG 188
>gi|153870185|ref|ZP_01999636.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
gi|152073352|gb|EDN70367.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
Length = 235
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGGIRL E +C FSSE + Y+ TY+ANF DI KI
Sbjct: 4 FEFIDLFAGIGGIRLGFE----SIGGKCVFSSEWDKYAQDTYEANFGERPEG-DITKINA 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ IP+H++LL GFPCQ FS G
Sbjct: 59 KTIPEHNILLGGFPCQAFSICG 80
>gi|293975|gb|AAB59071.1| cytosine methylase [Neisseria gonorrhoeae]
Length = 341
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+KI LF G GG+ L E+ E ++E + T++AN P T I GDI KIK
Sbjct: 12 MKIISLFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIK 67
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+D P+ D ++ G PCQ +S+AG
Sbjct: 68 EEDFPEEIDGIIGGPPCQSWSEAG 91
>gi|57506146|ref|ZP_00372067.1| cytosine specific DNA methyltransferase (DDEM) [Campylobacter
upsaliensis RM3195]
gi|57015541|gb|EAL52334.1| cytosine specific DNA methyltransferase (DDEM) [Campylobacter
upsaliensis RM3195]
Length = 316
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ LF G GG+ L + E F+++I+ + ++Y+ N ++ DI + ++
Sbjct: 1 MISLFSGCGGLDLGFIKA----GFEIVFANDIDKEACESYEKNIGKHILCKDIYTLDMKE 56
Query: 64 IPDHDVLLAGFPCQPFSQA 82
IP+ D+L+ GFPC F+ A
Sbjct: 57 IPNADILIGGFPCLGFTIA 75
>gi|220929948|ref|YP_002506857.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10]
gi|220000276|gb|ACL76877.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10]
Length = 338
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF G+GG R+ LE +C +S+E + K Y NF + DI +I
Sbjct: 12 FKFIDLFAGLGGFRIALE----SLGAKCVYSNEWDKPVRKVYTDNFGDIPEG-DITQINE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP+HD+L AGFPCQ FS +G
Sbjct: 67 NSIPEHDILCAGFPCQAFSISG 88
>gi|153854028|ref|ZP_01995361.1| hypothetical protein DORLON_01352 [Dorea longicatena DSM 13814]
gi|149753410|gb|EDM63341.1| hypothetical protein DORLON_01352 [Dorea longicatena DSM 13814]
Length = 468
Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
++ DLF GIGG R L + N C E++ Y+ K Y+ + D I
Sbjct: 43 IQFFDLFSGIGGFREGLRRAG---NFVCVGHCEVDTYADKNYRLLFDTEGEWYCNDTRTI 99
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ + +PD D+L AGFPCQ FS AG
Sbjct: 100 EPERMPDFDLLCAGFPCQAFSIAG 123
>gi|239627884|ref|ZP_04670915.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47_FAA]
gi|239518030|gb|EEQ57896.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47FAA]
Length = 325
Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLFCGIGG R LE C FS + N + TYQ+N+ + DI KI+
Sbjct: 4 FTFIDLFCGIGGFRQALE----SVGGTCVFSCDKNKNARLTYQSNYGDMPDG-DITKIEA 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIP ++L AGFPCQPFS AG
Sbjct: 59 KDIPPFNILCAGFPCQPFSIAG 80
>gi|317480905|ref|ZP_07939986.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36]
gi|316902990|gb|EFV24863.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36]
Length = 441
Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK DLF G+GG L LE EC F+SEI Y+ N
Sbjct: 4 LKFIDLFAGLGGFHLALE----KLGCECVFASEIQTELRTLYERNHGIICHGDINEVDIE 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIP+HD+L GFPCQPFSQAG
Sbjct: 60 KDIPEHDILCGGFPCQPFSQAG 81
>gi|228919775|ref|ZP_04083134.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228839862|gb|EEM85144.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 442
Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-------YSVKTYQANFPNTLIF 53
M+K+ +LF G+GG RL LE + N E + ++ P ++ Q
Sbjct: 16 MVKVVELFAGVGGFRLGLE---ANENFEIIWGNQWEPLTKAQHAFNCYATQFENKGIHEN 72
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
DIA++ +IP+HD+L+ GFPCQ +S A
Sbjct: 73 KDIAEVWP-EIPEHDLLVGGFPCQDYSVA 100
>gi|229195244|ref|ZP_04322018.1| Modification methylase Sau3AI [Bacillus cereus m1293]
gi|228588270|gb|EEK46314.1| Modification methylase Sau3AI [Bacillus cereus m1293]
Length = 442
Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-------YSVKTYQANFPNTLIF 53
M+K+ +LF G+GG RL LE + N E + ++ P ++ Q
Sbjct: 16 MVKVVELFAGVGGFRLGLE---ANENFEIIWGNQWEPLTKAQHAFNCYATQFENKGIHEN 72
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
DIA++ +IP+HD+L+ GFPCQ +S A
Sbjct: 73 KDIAEVWP-EIPEHDLLVGGFPCQDYSVA 100
>gi|269986305|gb|EEZ92611.1| DNA-cytosine methyltransferase [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 349
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
LF G GG+ L F+++ + +TY+ NF + L I IK++D+
Sbjct: 6 ISLFSGCGGLDLGFRNA----GFGIVFANDNDKAVWETYEKNFGHKLDGRSIIDIKSEDL 61
Query: 65 PDHDVLLAGFPCQPFSQAG 83
PD D ++ G PCQ +S AG
Sbjct: 62 PDADGIIGGPPCQSWSLAG 80
>gi|124002907|ref|ZP_01687758.1| modification methylase PspPI [Microscilla marina ATCC 23134]
gi|123991557|gb|EAY30965.1| modification methylase PspPI [Microscilla marina ATCC 23134]
Length = 353
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK-IK 60
++ LF G+GG L E F+ E NP+ + +P+T + DI +
Sbjct: 1 MRHASLFSGMGGFDLAAE----RMGWVNVFTVENNPFCQTILRHYWPDTTHYEDIRQTNF 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
T D+L GFPCQPFSQAG
Sbjct: 57 TPHYGQIDLLTGGFPCQPFSQAG 79
>gi|332968936|gb|EGK07982.1| DNA-cytosine methyltransferase [Desmospora sp. 8437]
Length = 379
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
++ DLF G GG+ E ++++ N Y+VKTY NF N + GDI +
Sbjct: 5 FRVIDLFSGAGGMSAGFSNLSKGD-FEPVWANDYNAYAVKTYNRNFDNHCVHGDIVDLLG 63
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQ 81
T +IP D+++ G PCQ FS
Sbjct: 64 DTTVEIPKADLVIGGPPCQGFSL 86
>gi|302873674|ref|YP_003842307.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|307686602|ref|ZP_07629048.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|302576531|gb|ADL50543.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
Length = 448
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+ D GIGG RL LE T +C E + ++VK+Y DI ++
Sbjct: 4 MTFLDFCAGIGGFRLGLELT----GHKCIGFCEKDKFAVKSYKAMFETEGEWYANDITEL 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K+ +IP D+ GFPCQ S AG
Sbjct: 60 KSDEIPYADIWCFGFPCQDISVAG 83
>gi|262113733|emb|CAR95400.1| hypothetical protein [Streptococcus phage phi-m46.1]
Length = 417
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
L D F G+GG R LE +C E + ++ K+Y + DI I
Sbjct: 3 LTFLDFFAGVGGFRRGLELA----GFKCIGYCEKDKFARKSYEAMYDTKGEWFHDDITSI 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+P D+ AG PCQ S AG
Sbjct: 59 DPTQLPKADLWCAGSPCQNVSIAG 82
>gi|10954474|ref|NP_039765.1| DNA cytosine-5 methylase subunit A [Methanothermobacter
thermautotrophicus]
gi|266583|sp|P29567|MTHT_METTF RecName: Full=Modification methylase MthTI; Short=M.MthTI;
AltName: Full=Cytosine-specific methyltransferase MthTI
gi|44641|emb|CAA48436.1| TIM [Methanothermobacter thermautotrophicus]
gi|149743|gb|AAA73370.1| TIM [Methanothermobacter thermautotrophicus]
Length = 330
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ I F G GG+ L + F+++ KT++ N + I +K
Sbjct: 3 MDIASFFSGAGGLDLGFTKA----GFNIVFANDNWKGCWKTFEKNHGIKINKKPIEWLKP 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+IPD + G PCQ +S AG
Sbjct: 59 SEIPDVVGFIGGPPCQSWSLAG 80
>gi|330911766|gb|EGH40276.1| DNA-cytosine methyltransferase [Escherichia coli AA86]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|323962004|gb|EGB57603.1| DNA-cytosine methyltransferase [Escherichia coli H489]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|323186716|gb|EFZ72038.1| DNA-cytosine methyltransferase [Escherichia coli RN587/1]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|323158561|gb|EFZ44575.1| DNA-cytosine methyltransferase [Escherichia coli E128010]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|323152708|gb|EFZ38980.1| DNA-cytosine methyltransferase [Escherichia coli EPECa14]
Length = 374
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|320641809|gb|EFX11197.1| DNA cytosine methylase [Escherichia coli O157:H7 str. G5101]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAVEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|320182772|gb|EFW57655.1| DNA-cytosine methyltransferase [Shigella boydii ATCC 9905]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEDVSDEGAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|315296465|gb|EFU55762.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 16-3]
Length = 476
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 188
>gi|315290247|gb|EFU49625.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 153-1]
Length = 478
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 93 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 148
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 149 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 190
>gi|315286667|gb|EFU46100.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 110-3]
Length = 475
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 90 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 145
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 146 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 187
>gi|309795932|ref|ZP_07690345.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 145-7]
gi|308120382|gb|EFO57644.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 145-7]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|331673470|ref|ZP_08374238.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA280]
gi|331069668|gb|EGI41055.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA280]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|331663456|ref|ZP_08364366.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA143]
gi|331059255|gb|EGI31232.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA143]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|331658007|ref|ZP_08358969.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA206]
gi|331056255|gb|EGI28264.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA206]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|331653374|ref|ZP_08354379.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M718]
gi|331049472|gb|EGI21544.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M718]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|307138628|ref|ZP_07497984.1| DNA cytosine methylase [Escherichia coli H736]
gi|331642581|ref|ZP_08343716.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H736]
gi|331039379|gb|EGI11599.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H736]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKDGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|306814216|ref|ZP_07448382.1| DNA cytosine methylase [Escherichia coli NC101]
gi|305852375|gb|EFM52826.1| DNA cytosine methylase [Escherichia coli NC101]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|300940416|ref|ZP_07155001.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 21-1]
gi|300454810|gb|EFK18303.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 21-1]
Length = 476
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 188
>gi|300923873|ref|ZP_07139889.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 182-1]
gi|300419870|gb|EFK03181.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 182-1]
Length = 477
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 92 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 148 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189
>gi|300975476|ref|ZP_07173024.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 45-1]
gi|300410366|gb|EFJ93904.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 45-1]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|300904853|ref|ZP_07122678.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1]
gi|301304244|ref|ZP_07210359.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1]
gi|300403236|gb|EFJ86774.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1]
gi|300840501|gb|EFK68261.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1]
gi|315257206|gb|EFU37174.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|301018179|ref|ZP_07182696.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1]
gi|300399832|gb|EFJ83370.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|300899219|ref|ZP_07117494.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 198-1]
gi|300357175|gb|EFJ73045.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 198-1]
Length = 477
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 92 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 148 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189
>gi|300994233|ref|ZP_07180788.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1]
gi|300304943|gb|EFJ59463.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1]
Length = 477
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 92 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 148 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189
>gi|301050676|ref|ZP_07197538.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 185-1]
gi|300297633|gb|EFJ54018.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 185-1]
Length = 477
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 92 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 148 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189
>gi|301029418|ref|ZP_07192512.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 196-1]
gi|299877722|gb|EFI85933.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 196-1]
Length = 476
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 188
>gi|294979850|pdb|3ME5|A Chain A, Crystal Structure Of Putative Dna Cytosine Methylase From
Shigella Flexneri 2a Str. 301
Length = 482
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 89 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 144
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 145 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 186
>gi|293410317|ref|ZP_06653893.1| conserved hypothetical protein [Escherichia coli B354]
gi|291470785|gb|EFF13269.1| conserved hypothetical protein [Escherichia coli B354]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKDGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|291463698|pdb|3LX6|A Chain A, Structure Of Probable Cytosine-Specific Methyltransferase
From Shigella Flexneri
gi|291463699|pdb|3LX6|B Chain B, Structure Of Probable Cytosine-Specific Methyltransferase
From Shigella Flexneri
Length = 410
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 27 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 82
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 83 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 124
>gi|284921868|emb|CBG34943.1| DNA-cytosine methyltransferase [Escherichia coli 042]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKDGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|260855934|ref|YP_003229825.1| DNA cytosine methylase [Escherichia coli O26:H11 str. 11368]
gi|300822269|ref|ZP_07102410.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 119-7]
gi|257754583|dbj|BAI26085.1| DNA cytosine methylase [Escherichia coli O26:H11 str. 11368]
gi|300525152|gb|EFK46221.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 119-7]
gi|309702249|emb|CBJ01566.1| DNA-cytosine methyltransferase [Escherichia coli ETEC H10407]
gi|323937230|gb|EGB33510.1| DNA-cytosine methyltransferase [Escherichia coli E1520]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|218705454|ref|YP_002412973.1| DNA cytosine methylase [Escherichia coli UMN026]
gi|293405443|ref|ZP_06649435.1| DNA cytosine methylase [Escherichia coli FVEC1412]
gi|298381087|ref|ZP_06990686.1| DNA cytosine methylase [Escherichia coli FVEC1302]
gi|218432551|emb|CAR13444.1| DNA cytosine methylase [Escherichia coli UMN026]
gi|291427651|gb|EFF00678.1| DNA cytosine methylase [Escherichia coli FVEC1412]
gi|298278529|gb|EFI20043.1| DNA cytosine methylase [Escherichia coli FVEC1302]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|218554541|ref|YP_002387454.1| DNA cytosine methylase [Escherichia coli IAI1]
gi|260868553|ref|YP_003234955.1| DNA cytosine methylase [Escherichia coli O111:H- str. 11128]
gi|218361309|emb|CAQ98893.1| DNA cytosine methylase [Escherichia coli IAI1]
gi|257764909|dbj|BAI36404.1| DNA cytosine methylase [Escherichia coli O111:H- str. 11128]
gi|323180787|gb|EFZ66327.1| DNA-cytosine methyltransferase [Escherichia coli 1180]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|218695565|ref|YP_002403232.1| DNA cytosine methylase [Escherichia coli 55989]
gi|256022383|ref|ZP_05436248.1| DNA cytosine methylase [Escherichia sp. 4_1_40B]
gi|218352297|emb|CAU98056.1| DNA cytosine methylase [Escherichia coli 55989]
gi|323972739|gb|EGB67939.1| DNA-cytosine methyltransferase [Escherichia coli TA007]
gi|332343686|gb|AEE57020.1| DNA-cytosine methyltransferase [Escherichia coli UMNK88]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|215487159|ref|YP_002329590.1| DNA cytosine methylase [Escherichia coli O127:H6 str. E2348/69]
gi|312967158|ref|ZP_07781376.1| DNA-cytosine methyltransferase [Escherichia coli 2362-75]
gi|215265231|emb|CAS09622.1| DNA cytosine methylase [Escherichia coli O127:H6 str. E2348/69]
gi|312288622|gb|EFR16524.1| DNA-cytosine methyltransferase [Escherichia coli 2362-75]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|194433657|ref|ZP_03065933.1| DNA-cytosine methyltransferase [Shigella dysenteriae 1012]
gi|194418086|gb|EDX34179.1| DNA-cytosine methyltransferase [Shigella dysenteriae 1012]
gi|332095525|gb|EGJ00541.1| DNA-cytosine methyltransferase [Shigella dysenteriae 155-74]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEGAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|188494720|ref|ZP_03001990.1| DNA-cytosine methyltransferase [Escherichia coli 53638]
gi|188489919|gb|EDU65022.1| DNA-cytosine methyltransferase [Escherichia coli 53638]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|170681403|ref|YP_001743285.1| DNA cytosine methylase [Escherichia coli SMS-3-5]
gi|170519121|gb|ACB17299.1| DNA-cytosine methyltransferase [Escherichia coli SMS-3-5]
gi|324119009|gb|EGC12898.1| DNA-cytosine methyltransferase [Escherichia coli E1167]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|91211180|ref|YP_541166.1| DNA cytosine methylase [Escherichia coli UTI89]
gi|117624099|ref|YP_853012.1| DNA cytosine methylase [Escherichia coli APEC O1]
gi|218558817|ref|YP_002391730.1| DNA cytosine methylase [Escherichia coli S88]
gi|91072754|gb|ABE07635.1| DNA cytosine methylase [Escherichia coli UTI89]
gi|115513223|gb|ABJ01298.1| DNA cytosine methylase [Escherichia coli APEC O1]
gi|218365586|emb|CAR03313.1| DNA cytosine methylase [Escherichia coli S88]
gi|294492656|gb|ADE91412.1| DNA-cytosine methyltransferase [Escherichia coli IHE3034]
gi|307626564|gb|ADN70868.1| DNA cytosine methylase [Escherichia coli UM146]
gi|323952452|gb|EGB48325.1| DNA-cytosine methyltransferase [Escherichia coli H252]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|82543581|ref|YP_407528.1| DNA cytosine methylase [Shigella boydii Sb227]
gi|81244992|gb|ABB65700.1| DNA cytosine methylase [Shigella boydii Sb227]
gi|332096894|gb|EGJ01883.1| DNA-cytosine methyltransferase [Shigella boydii 3594-74]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|74312499|ref|YP_310918.1| DNA cytosine methylase [Shigella sonnei Ss046]
gi|73855976|gb|AAZ88683.1| DNA cytosine methylase [Shigella sonnei Ss046]
gi|323168918|gb|EFZ54598.1| DNA-cytosine methyltransferase [Shigella sonnei 53G]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|24113334|ref|NP_707844.1| DNA cytosine methylase [Shigella flexneri 2a str. 301]
gi|30063396|ref|NP_837567.1| DNA cytosine methylase [Shigella flexneri 2a str. 2457T]
gi|110805927|ref|YP_689447.1| DNA cytosine methylase [Shigella flexneri 5 str. 8401]
gi|24052347|gb|AAN43551.1| DNA cytosine methylase [Shigella flexneri 2a str. 301]
gi|30041648|gb|AAP17376.1| DNA cytosine methylase [Shigella flexneri 2a str. 2457T]
gi|110615475|gb|ABF04142.1| DNA cytosine methylase [Shigella flexneri 5 str. 8401]
gi|281601397|gb|ADA74381.1| Cytosine-specific methyltransferase [Shigella flexneri 2002017]
gi|313650184|gb|EFS14597.1| DNA-cytosine methyltransferase [Shigella flexneri 2a str. 2457T]
gi|332756118|gb|EGJ86471.1| DNA-cytosine methyltransferase [Shigella flexneri 4343-70]
gi|332757312|gb|EGJ87649.1| DNA-cytosine methyltransferase [Shigella flexneri 2747-71]
gi|332757528|gb|EGJ87863.1| DNA-cytosine methyltransferase [Shigella flexneri K-671]
gi|332766700|gb|EGJ96904.1| cytosine-specific methyltransferase [Shigella flexneri 2930-71]
gi|333003060|gb|EGK22614.1| DNA-cytosine methyltransferase [Shigella flexneri VA-6]
gi|333003307|gb|EGK22853.1| DNA-cytosine methyltransferase [Shigella flexneri K-218]
gi|333004068|gb|EGK23602.1| DNA-cytosine methyltransferase [Shigella flexneri K-272]
gi|333017687|gb|EGK36999.1| DNA-cytosine methyltransferase [Shigella flexneri K-304]
gi|333017841|gb|EGK37148.1| DNA-cytosine methyltransferase [Shigella flexneri K-227]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|26248232|ref|NP_754272.1| DNA cytosine methylase [Escherichia coli CFT073]
gi|227885611|ref|ZP_04003416.1| DNA cytosine methylase [Escherichia coli 83972]
gi|237705920|ref|ZP_04536401.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA]
gi|331647554|ref|ZP_08348646.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M605]
gi|26108636|gb|AAN80839.1|AE016762_92 DNA-cytosine methyltransferase [Escherichia coli CFT073]
gi|226900677|gb|EEH86936.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA]
gi|227837184|gb|EEJ47650.1| DNA cytosine methylase [Escherichia coli 83972]
gi|281179022|dbj|BAI55352.1| DNA cytosine methylase [Escherichia coli SE15]
gi|307553973|gb|ADN46748.1| DNA cytosine methylase [Escherichia coli ABU 83972]
gi|320194327|gb|EFW68958.1| DNA-cytosine methyltransferase [Escherichia coli WV_060327]
gi|323956356|gb|EGB52099.1| DNA-cytosine methyltransferase [Escherichia coli H263]
gi|324005878|gb|EGB75097.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 57-2]
gi|331043278|gb|EGI15416.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M605]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|15802395|ref|NP_288421.1| DNA cytosine methylase [Escherichia coli O157:H7 EDL933]
gi|15831953|ref|NP_310726.1| DNA cytosine methylase [Escherichia coli O157:H7 str. Sakai]
gi|16129907|ref|NP_416470.1| DNA cytosine methyltransferase [Escherichia coli str. K-12 substr.
MG1655]
gi|89108792|ref|AP_002572.1| DNA cytosine methylase [Escherichia coli str. K-12 substr. W3110]
gi|168752207|ref|ZP_02777229.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4113]
gi|168758275|ref|ZP_02783282.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4401]
gi|168771615|ref|ZP_02796622.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4486]
gi|168777717|ref|ZP_02802724.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4196]
gi|168783359|ref|ZP_02808366.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4076]
gi|168789321|ref|ZP_02814328.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC869]
gi|168801737|ref|ZP_02826744.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC508]
gi|170081604|ref|YP_001730924.1| DNA cytosine methylase [Escherichia coli str. K-12 substr. DH10B]
gi|195939267|ref|ZP_03084649.1| DNA cytosine methylase [Escherichia coli O157:H7 str. EC4024]
gi|208810340|ref|ZP_03252216.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4206]
gi|208816602|ref|ZP_03257722.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4045]
gi|208821263|ref|ZP_03261583.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4042]
gi|209400193|ref|YP_002271076.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4115]
gi|209919382|ref|YP_002293466.1| DNA cytosine methylase [Escherichia coli SE11]
gi|217328629|ref|ZP_03444710.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|218689956|ref|YP_002398168.1| DNA cytosine methylase [Escherichia coli ED1a]
gi|238901165|ref|YP_002926961.1| DNA cytosine methylase [Escherichia coli BW2952]
gi|253773091|ref|YP_003035922.1| DNA cytosine methylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254793611|ref|YP_003078448.1| DNA cytosine methylase [Escherichia coli O157:H7 str. TW14359]
gi|256017846|ref|ZP_05431711.1| DNA cytosine methylase [Shigella sp. D9]
gi|261227545|ref|ZP_05941826.1| DNA cytosine methylase [Escherichia coli O157:H7 str. FRIK2000]
gi|261254631|ref|ZP_05947164.1| DNA cytosine methylase [Escherichia coli O157:H7 str. FRIK966]
gi|293415271|ref|ZP_06657914.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185]
gi|300818618|ref|ZP_07098826.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 107-1]
gi|300920181|ref|ZP_07136630.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 115-1]
gi|301327749|ref|ZP_07220953.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1]
gi|301644580|ref|ZP_07244570.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 146-1]
gi|307312454|ref|ZP_07592088.1| DNA-cytosine methyltransferase [Escherichia coli W]
gi|312973821|ref|ZP_07787993.1| DNA-cytosine methyltransferase [Escherichia coli 1827-70]
gi|332278872|ref|ZP_08391285.1| DNA cytosine methylase [Shigella sp. D9]
gi|83305674|sp|P0AEE0|DCM_ECO57 RecName: Full=DNA-cytosine methyltransferase
gi|83305675|sp|P0AED9|DCM_ECOLI RecName: Full=DNA-cytosine methyltransferase; AltName:
Full=M.EcoDcm
gi|12516070|gb|AAG56975.1|AE005418_3 DNA cytosine methylase [Escherichia coli O157:H7 str. EDL933]
gi|41239|emb|CAA31705.1| unnamed protein product [Escherichia coli K-12]
gi|145719|gb|AAA03723.1| DNA cytosine methylase [Escherichia coli]
gi|1736630|dbj|BAA15788.1| DNA cytosine methylase [Escherichia coli str. K12 substr. W3110]
gi|1788271|gb|AAC75027.1| DNA cytosine methyltransferase [Escherichia coli str. K-12 substr.
MG1655]
gi|13362167|dbj|BAB36122.1| DNA cytosine methylase [Escherichia coli O157:H7 str. Sakai]
gi|169889439|gb|ACB03146.1| DNA cytosine methylase [Escherichia coli str. K-12 substr. DH10B]
gi|187767102|gb|EDU30946.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4196]
gi|188013903|gb|EDU52025.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4113]
gi|188999305|gb|EDU68291.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4076]
gi|189354901|gb|EDU73320.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4401]
gi|189359668|gb|EDU78087.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4486]
gi|189371047|gb|EDU89463.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC869]
gi|189376137|gb|EDU94553.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC508]
gi|208724856|gb|EDZ74563.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4206]
gi|208730945|gb|EDZ79634.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4045]
gi|208741386|gb|EDZ89068.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4042]
gi|209161593|gb|ACI39026.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC4115]
gi|209766668|gb|ACI81646.1| DNA cytosine methylase [Escherichia coli]
gi|209766670|gb|ACI81647.1| DNA cytosine methylase [Escherichia coli]
gi|209766672|gb|ACI81648.1| DNA cytosine methylase [Escherichia coli]
gi|209766676|gb|ACI81650.1| DNA cytosine methylase [Escherichia coli]
gi|209912641|dbj|BAG77715.1| DNA cytosine methylase [Escherichia coli SE11]
gi|217317976|gb|EEC26403.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|218427520|emb|CAR08415.2| DNA cytosine methylase [Escherichia coli ED1a]
gi|238860813|gb|ACR62811.1| DNA cytosine methylase [Escherichia coli BW2952]
gi|253324135|gb|ACT28737.1| DNA-cytosine methyltransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254593011|gb|ACT72372.1| DNA cytosine methylase [Escherichia coli O157:H7 str. TW14359]
gi|260448927|gb|ACX39349.1| DNA-cytosine methyltransferase [Escherichia coli DH1]
gi|291432919|gb|EFF05898.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185]
gi|300412803|gb|EFJ96113.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 115-1]
gi|300528790|gb|EFK49852.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 107-1]
gi|300845711|gb|EFK73471.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1]
gi|301077088|gb|EFK91894.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 146-1]
gi|306907625|gb|EFN38128.1| DNA-cytosine methyltransferase [Escherichia coli W]
gi|310332416|gb|EFP99651.1| DNA-cytosine methyltransferase [Escherichia coli 1827-70]
gi|315061260|gb|ADT75587.1| DNA cytosine methylase [Escherichia coli W]
gi|315136597|dbj|BAJ43756.1| DNA cytosine methylase [Escherichia coli DH1]
gi|320191934|gb|EFW66581.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
EC1212]
gi|320198651|gb|EFW73251.1| DNA-cytosine methyltransferase [Escherichia coli EC4100B]
gi|320647167|gb|EFX16000.1| DNA cytosine methylase [Escherichia coli O157:H- str. 493-89]
gi|320652452|gb|EFX20750.1| DNA cytosine methylase [Escherichia coli O157:H- str. H 2687]
gi|320658054|gb|EFX25816.1| DNA cytosine methylase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320658625|gb|EFX26319.1| DNA cytosine methylase [Escherichia coli O55:H7 str. USDA 5905]
gi|320668523|gb|EFX35350.1| DNA cytosine methylase [Escherichia coli O157:H7 str. LSU-61]
gi|323174657|gb|EFZ60277.1| DNA-cytosine methyltransferase [Escherichia coli LT-68]
gi|323183944|gb|EFZ69331.1| DNA-cytosine methyltransferase [Escherichia coli 1357]
gi|323378163|gb|ADX50431.1| DNA-cytosine methyltransferase [Escherichia coli KO11]
gi|323948336|gb|EGB44323.1| DNA-cytosine methyltransferase [Escherichia coli H120]
gi|326342371|gb|EGD66152.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. 1044]
gi|326344875|gb|EGD68622.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. 1125]
gi|332101224|gb|EGJ04570.1| DNA cytosine methylase [Shigella sp. D9]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|193066646|ref|ZP_03047681.1| DNA-cytosine methyltransferase [Escherichia coli E22]
gi|260844359|ref|YP_003222137.1| DNA cytosine methylase [Escherichia coli O103:H2 str. 12009]
gi|192925721|gb|EDV80380.1| DNA-cytosine methyltransferase [Escherichia coli E22]
gi|257759506|dbj|BAI31003.1| DNA cytosine methylase [Escherichia coli O103:H2 str. 12009]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|191169235|ref|ZP_03030988.1| DNA-cytosine methyltransferase [Escherichia coli B7A]
gi|190900713|gb|EDV60509.1| DNA-cytosine methyltransferase [Escherichia coli B7A]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|110642066|ref|YP_669796.1| DNA cytosine methylase [Escherichia coli 536]
gi|191173268|ref|ZP_03034798.1| DNA-cytosine methyltransferase [Escherichia coli F11]
gi|110343658|gb|ABG69895.1| DNA-cytosine methyltransferase [Escherichia coli 536]
gi|190906385|gb|EDV65994.1| DNA-cytosine methyltransferase [Escherichia coli F11]
gi|222033699|emb|CAP76440.1| DNA-cytosine methyltransferase [Escherichia coli LF82]
gi|312946553|gb|ADR27380.1| DNA cytosine methylase [Escherichia coli O83:H1 str. NRG 857C]
gi|324013473|gb|EGB82692.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 60-1]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|157161430|ref|YP_001458748.1| DNA cytosine methylase [Escherichia coli HS]
gi|157067110|gb|ABV06365.1| DNA-cytosine methyltransferase [Escherichia coli HS]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|194430436|ref|ZP_03062919.1| DNA-cytosine methyltransferase [Escherichia coli B171]
gi|194411515|gb|EDX27854.1| DNA-cytosine methyltransferase [Escherichia coli B171]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|193071315|ref|ZP_03052233.1| DNA-cytosine methyltransferase [Escherichia coli E110019]
gi|331683510|ref|ZP_08384111.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H299]
gi|192955357|gb|EDV85842.1| DNA-cytosine methyltransferase [Escherichia coli E110019]
gi|331079725|gb|EGI50922.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H299]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|157158517|ref|YP_001463262.1| DNA cytosine methylase [Escherichia coli E24377A]
gi|157080547|gb|ABV20255.1| DNA-cytosine methyltransferase [Escherichia coli E24377A]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|187732725|ref|YP_001879611.1| DNA cytosine methylase [Shigella boydii CDC 3083-94]
gi|293446340|ref|ZP_06662762.1| DNA-cytosine methyltransferase [Escherichia coli B088]
gi|187429717|gb|ACD08991.1| DNA-cytosine methyltransferase [Shigella boydii CDC 3083-94]
gi|291323170|gb|EFE62598.1| DNA-cytosine methyltransferase [Escherichia coli B088]
gi|320175451|gb|EFW50550.1| DNA-cytosine methyltransferase [Shigella dysenteriae CDC 74-1112]
gi|320184499|gb|EFW59303.1| DNA-cytosine methyltransferase [Shigella flexneri CDC 796-83]
Length = 472
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|186686332|ref|YP_001869528.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
gi|186468784|gb|ACC84585.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
Length = 331
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ DLF G GG+ L + + + ++ YQ NF + + D+ ++
Sbjct: 14 LRVVDLFAGCGGLSLGFQNA----GFNIVAAFDNWKPAIDVYQKNFSHEIFDYDLNNLRK 69
Query: 62 QDI----PDHDVLLAGFPCQPFSQAG 83
++++ G PCQ FS AG
Sbjct: 70 NYQIFREICPEIIIGGPPCQDFSSAG 95
>gi|325130344|gb|EGC53110.1| modification methylase EcoRII [Neisseria meningitidis OX99.30304]
Length = 337
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
DLF GIGG R+ +E + C FSSE + + +TYQ NF + + + K
Sbjct: 20 FTFIDLFAGIGGFRIAME----NVGGRCVFSSEWDDKARQTYQVNFNDIPYGDITLKETK 75
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DVL AGFPCQPFS AG
Sbjct: 76 AAIPSKFDVLTAGFPCQPFSIAG 98
>gi|323650438|gb|ADX97294.1| M.Cac8I [Clostridium acetobutylicum]
Length = 398
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 15/93 (16%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI---- 56
++++ F G GG+ L E +S++ + +V+TY N +
Sbjct: 25 LMRVISFFSGAGGMDLGFTLA----GHEIVWSNDFDKDAVQTYNENIGKYWKHESVLGDI 80
Query: 57 -------AKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ + IPD DV++ GFPCQ FS A
Sbjct: 81 TKLLSKPFEEIDKIIPDGDVVIGGFPCQGFSIA 113
>gi|304387412|ref|ZP_07369603.1| modification methylase EcoRII [Neisseria meningitidis ATCC 13091]
gi|304338505|gb|EFM04624.1| modification methylase EcoRII [Neisseria meningitidis ATCC 13091]
Length = 336
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
DLF GIGG R+ +E + C FSSE + + +TYQ NF + + + K
Sbjct: 20 FTFIDLFAGIGGFRIAME----NVGGRCVFSSEWDDKARQTYQVNFNDIPYGDITLKETK 75
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DVL AGFPCQPFS AG
Sbjct: 76 AAIPSKFDVLTAGFPCQPFSIAG 98
>gi|209528195|ref|ZP_03276665.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209491380|gb|EDZ91765.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 315
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 30/89 (33%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
DLF G GGI Q S EINP + + GD+
Sbjct: 59 YNFIDLFSGAGGITQGFWQA----GFNPVASVEINPIASATHQRNFPNCHHFCGDVNDFN 114
Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83
P +++ G PCQ FS AG
Sbjct: 115 PHQWLSKIGSPSVHLVVGGPPCQGFSVAG 143
>gi|15677157|ref|NP_274310.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis MC58]
gi|161870164|ref|YP_001599334.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis
053442]
gi|218768314|ref|YP_002342826.1| putative modification methylase [Neisseria meningitidis Z2491]
gi|7226530|gb|AAF41666.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis MC58]
gi|121052322|emb|CAM08652.1| putative modification methylase [Neisseria meningitidis Z2491]
gi|161595717|gb|ABX73377.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis
053442]
gi|254670478|emb|CBA06174.1| putative DNA modification methylase [Neisseria meningitidis
alpha153]
gi|308389411|gb|ADO31731.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis
alpha710]
gi|316984080|gb|EFV63058.1| modification methylase SsoII [Neisseria meningitidis H44/76]
gi|319410559|emb|CBY90927.1| putative type II restriction-modification system enzyme Mod
[Neisseria meningitidis WUE 2594]
gi|325134466|gb|EGC57111.1| modification methylase EcoRII [Neisseria meningitidis M13399]
gi|325136204|gb|EGC58812.1| modification methylase EcoRII [Neisseria meningitidis M0579]
gi|325140483|gb|EGC63004.1| modification methylase EcoRII [Neisseria meningitidis CU385]
gi|325144567|gb|EGC66866.1| modification methylase EcoRII [Neisseria meningitidis M01-240013]
gi|325200082|gb|ADY95537.1| modification methylase EcoRII [Neisseria meningitidis H44/76]
gi|325201996|gb|ADY97450.1| modification methylase EcoRII [Neisseria meningitidis M01-240149]
gi|325205934|gb|ADZ01387.1| modification methylase EcoRII [Neisseria meningitidis M04-240196]
gi|325208252|gb|ADZ03704.1| modification methylase EcoRII [Neisseria meningitidis NZ-05/33]
Length = 337
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
DLF GIGG R+ +E + C FSSE + + +TYQ NF + + + K
Sbjct: 20 FTFIDLFAGIGGFRIAME----NVGGRCVFSSEWDDKARQTYQVNFNDIPYGDITLKETK 75
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DVL AGFPCQPFS AG
Sbjct: 76 AAIPSKFDVLTAGFPCQPFSIAG 98
>gi|296282358|ref|ZP_06860356.1| DNA-cytosine methyltransferase [Citromicrobium bathyomarinum JL354]
Length = 439
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGG+R+ + C F+SE + ++ +TY+ NF + +
Sbjct: 90 FRFIDLFAGIGGLRIGFQ----GIGGHCVFTSEWDRFAQETYRVNFRDNHKLHGDVREFA 145
Query: 62 QDI---PDHDVLLAGFPCQPFSQAG 83
++ P+HDVLL GFPCQPFS AG
Sbjct: 146 ENPELIPEHDVLLGGFPCQPFSLAG 170
>gi|206975132|ref|ZP_03236046.1| modification methylase HaeIII [Bacillus cereus H3081.97]
gi|206746553|gb|EDZ57946.1| modification methylase HaeIII [Bacillus cereus H3081.97]
Length = 352
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------DI 56
+ DLF G+GG+ L EQ E ++E + Y+ N NT + DI
Sbjct: 4 TVIDLFAGVGGLSLGFEQ----EGFEVVLANEYDESIANAYKKNHRNTKMIVGDIAELDI 59
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + DV++ G PCQ FSQ G
Sbjct: 60 KNVFCPYVGKIDVIIGGPPCQGFSQKG 86
>gi|300724477|ref|YP_003713798.1| DNA cytosine methylase [Xenorhabdus nematophila ATCC 19061]
gi|297631015|emb|CBJ91699.1| DNA cytosine methylase [Xenorhabdus nematophila ATCC 19061]
Length = 476
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 48/102 (47%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+ + + + DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----EIGGQCVFTSEWNKDAVRTYKANWYCDPEEHVFNSDIR 151
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I ++IP+HDVLLAGFPCQPFS AG
Sbjct: 152 DITLSHDISVSDKEAYQNIDREIPNHDVLLAGFPCQPFSLAG 193
>gi|238783073|ref|ZP_04627100.1| Modification methylase EcoRII [Yersinia bercovieri ATCC 43970]
gi|238716074|gb|EEQ08059.1| Modification methylase EcoRII [Yersinia bercovieri ATCC 43970]
Length = 475
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 49/102 (48%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE NPY+V+ + + DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----AIGGQCVFTSEWNPYAVRTYKANWYCDPDEHRFNSDIR 151
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
+I Q IPDHDVLLAGFPCQPFS AG
Sbjct: 152 EITLSETAEISDEEAYKYIDQHIPDHDVLLAGFPCQPFSLAG 193
>gi|332879681|ref|ZP_08447373.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332682372|gb|EGJ55277.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 299
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI DLF GIGG L ++ + + SEI+ +++ Y+ NFPN GDI I+
Sbjct: 1 MKIIDLFSGIGGFSLGFQRAGYN--FTEHYFSEIDKHAIANYKYNFPNAKHIGDITTIQP 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++ D++ G PC FS AG
Sbjct: 59 ANLAGADIITFGSPCVDFSVAG 80
>gi|330723388|gb|AEC45758.1| DNA-cytosine methyltransferase family protein [Mycoplasma
hyorhinis MCLD]
Length = 407
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ +LF G+GG RL E+T + ++++ P K + + +
Sbjct: 9 IKVVELFAGVGGFRLGFERTSKL--FKTIWANQWEPNKTKQWAFDCYTKHFGNSDNHVNE 66
Query: 62 ------QDIPDHDVLLAGFPCQPFSQA 82
+P+HD+L+ GFPCQ +S A
Sbjct: 67 DIANVIDQVPEHDLLVGGFPCQDYSVA 93
>gi|304373002|ref|YP_003856211.1| DNA-cytosine methyltransferase family protein [Mycoplasma
hyorhinis HUB-1]
gi|304309193|gb|ADM21673.1| DNA-cytosine methyltransferase family protein [Mycoplasma
hyorhinis HUB-1]
Length = 407
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ +LF G+GG RL E+T + ++++ P K + + +
Sbjct: 9 IKVVELFAGVGGFRLGFERTSKL--FKTIWANQWEPNKTKQWAFDCYTKHFGNSDNHVNE 66
Query: 62 ------QDIPDHDVLLAGFPCQPFSQA 82
+P+HD+L+ GFPCQ +S A
Sbjct: 67 DIANVIDQVPEHDLLVGGFPCQDYSVA 93
>gi|46581246|ref|YP_012054.1| type II DNA modification methyltransferase [Desulfovibrio
vulgaris str. Hildenborough]
gi|46450667|gb|AAS97314.1| type II DNA modification methyltransferase, putative
[Desulfovibrio vulgaris str. Hildenborough]
gi|311234912|gb|ADP87766.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
Length = 358
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 47/91 (51%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
DLF GIGGIRL E C S+E + Y+ KTY+A F + F
Sbjct: 7 FSFIDLFAGIGGIRLGFEAA----GGRCVMSAEYDKYAQKTYRAFFGESPDFSEIMSVSP 62
Query: 55 --DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI K+ +PDHDVL GFPCQPFS AG
Sbjct: 63 PGDITKLPPHLVPDHDVLTGGFPCQPFSLAG 93
>gi|324018843|gb|EGB88062.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 117-3]
Length = 472
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I + IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVNDEAAAEHIRKHIPEHDVLLAGFPCQPFSLAG 184
>gi|300951590|ref|ZP_07165422.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 116-1]
gi|300449174|gb|EFK12794.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 116-1]
Length = 478
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 93 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 148
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I + IP+HDVLLAGFPCQPFS AG
Sbjct: 149 DITLSHKEGVSDEAAAEHIRKHIPEHDVLLAGFPCQPFSLAG 190
>gi|300956520|ref|ZP_07168803.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 175-1]
gi|300316661|gb|EFJ66445.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 175-1]
Length = 477
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 92 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I + IP+HDVLLAGFPCQPFS AG
Sbjct: 148 DITLSHKEGVSDEAAAEHIRKHIPEHDVLLAGFPCQPFSLAG 189
>gi|170019707|ref|YP_001724661.1| DNA cytosine methylase [Escherichia coli ATCC 8739]
gi|169754635|gb|ACA77334.1| DNA-cytosine methyltransferase [Escherichia coli ATCC 8739]
gi|323940380|gb|EGB36571.1| DNA-cytosine methyltransferase [Escherichia coli E482]
gi|332093084|gb|EGI98148.1| DNA-cytosine methyltransferase [Shigella boydii 5216-82]
Length = 472
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I + IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRKHIPEHDVLLAGFPCQPFSLAG 184
>gi|157691446|ref|YP_001485908.1| DNA (cytosine-5-)-methyltransferase [Bacillus pumilus SAFR-032]
gi|157680204|gb|ABV61348.1| DNA (cytosine-5-)-methyltransferase [Bacillus pumilus SAFR-032]
Length = 548
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ DLF G GG+ L QT E + EIN + +TY N + DI I +
Sbjct: 5 KVLDLFAGAGGLSLGFSQTGR---FETVMAVEINENAAQTYTKNHKIEVNTQDIRSINFK 61
Query: 63 DIPDHDVL------LAGFPCQPFSQA 82
D + +L + G PCQ FS A
Sbjct: 62 DYKKYPILKEVSLVIGGPPCQGFSNA 87
>gi|2599488|gb|AAB84141.1| FauI DNA methyltransferase [Flavobacterium aquatile]
Length = 343
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
LK+ LFCG GG+ + ++ F + ++ + + Y+ K Y NF +
Sbjct: 10 LKVASLFCGCGGMDVGIQGDFKFLKKHYDTLPFKVVYAVDNDAYATKIYNDNFAHKCETK 69
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
D+ I ++PDHD+LL GFPCQ FS
Sbjct: 70 DVRDIVPSEVPDHDILLGGFPCQSFSI 96
>gi|269978372|gb|ACZ55920.1| putative type I restriction-modification system specificity
subunit S [Helicobacter pylori]
Length = 263
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
KI LF G GG+ L E ++++ +V+TYQ N + +++GDI KI +
Sbjct: 10 YKIISLFSGCGGLDLGF----IKEGFEVIWANDFFKEAVETYQKNIGSHIVYGDITKIPS 65
Query: 62 QDIPD-HDVLLAGFPCQPFSQA 82
DIP+ DVLL GFPCQ FS A
Sbjct: 66 GDIPNECDVLLGGFPCQGFSVA 87
>gi|261340425|ref|ZP_05968283.1| DNA (cytosine-5-)-methyltransferase [Enterobacter cancerogenus ATCC
35316]
gi|288317516|gb|EFC56454.1| DNA (cytosine-5-)-methyltransferase [Enterobacter cancerogenus ATCC
35316]
Length = 477
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ + + DI
Sbjct: 92 FRFIDLFAGIGGIRHGFE----AIGGQCVFTSEWNKHAVRTYKANWYCDPDEHHFNADIR 147
Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83
+ IP HDVLLAGFPCQPFS AG
Sbjct: 148 DVTLSHKSGVTDEEAAHHIRQAIPAHDVLLAGFPCQPFSLAG 189
>gi|37524351|ref|NP_927695.1| DNA cytosine methylase [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36783775|emb|CAE12633.1| DNA-cytosine methyltransferase [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 478
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----EIGGQCVFTSEWNKDAVRTYKANWYCDPESHKFNSDIR 151
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
+I ++IPDHDVLLAGFPCQPFS AG
Sbjct: 152 EITLSENSKIDEKEAYKNIDKEIPDHDVLLAGFPCQPFSLAG 193
>gi|323977859|gb|EGB72945.1| DNA-cytosine methyltransferase [Escherichia coli TW10509]
Length = 472
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN+ DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANYYCDPAVHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGIGDDAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|323968376|gb|EGB63783.1| DNA-cytosine methyltransferase [Escherichia coli M863]
gi|327253092|gb|EGE64746.1| DNA-cytosine methyltransferase [Escherichia coli STEC_7v]
Length = 472
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN+ DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANYYCDPAVHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGIGDDAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|170769440|ref|ZP_02903893.1| DNA-cytosine methyltransferase [Escherichia albertii TW07627]
gi|170121764|gb|EDS90695.1| DNA-cytosine methyltransferase [Escherichia albertii TW07627]
Length = 472
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN+ DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANYYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDAAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|218902126|ref|YP_002449960.1| cytosine-specific methyltransferase NlaX [Bacillus cereus AH820]
gi|218538919|gb|ACK91317.1| cytosine-specific methyltransferase NlaX [Bacillus cereus AH820]
Length = 350
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
K+ +F GIGG L +Q E +++E++ + TY+ + D+ ++
Sbjct: 5 YKLGSMFAGIGGTCLGFQQA----GAEIVWANEVDRNASITYRHFWKGEYLQEADVTEVD 60
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
IP D+L+ GFPCQ FS AG
Sbjct: 61 KTTIPQLDILIGGFPCQAFSIAG 83
>gi|294083958|ref|YP_003550715.1| cytosine-specific methyltransferase [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663530|gb|ADE38631.1| Cytosine-specific methyltransferase [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 407
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI- 59
MLK DL GIGG L E + + + + K ++P+ I D+ ++
Sbjct: 1 MLKHLDLASGIGGFSLGFEWAGLS---QPIMFCDTDEWCRKVLNKHWPDVPIVNDVKELA 57
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83
+ IPDHD+L AG+PCQPFS AG
Sbjct: 58 NEPSQIPDHDILSAGYPCQPFSVAG 82
>gi|145592627|ref|YP_001156924.1| C-5 cytosine-specific DNA methylase [Salinispora tropica CNB-440]
gi|145301964|gb|ABP52546.1| C-5 cytosine-specific DNA methylase [Salinispora tropica CNB-440]
Length = 236
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
L + +LF GIGG+ L L++ + EINP+ ++P D+
Sbjct: 6 LNVLELFAGIGGLSLGLQRA----GLRIVGHVEINPFCRAVLHKHWPEVPCHDDVRTAAA 61
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ D P DV+ G+PCQP S AG
Sbjct: 62 WWRSTDRPRVDVVAGGYPCQPESTAG 87
>gi|309389435|gb|ADO77315.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM
2228]
Length = 328
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKI 59
ML DLF G GG+ E+ E FS E NP ++ + N LI DIA I
Sbjct: 1 MLNYIDLFSGAGGMSCGFEKA----GFENIFSLEFNPEFAETYKKNFPKNNLIVKDIADI 56
Query: 60 KTQDIPDH------DVLLAGFPCQPFSQAG 83
++ DV++ G PCQ FS AG
Sbjct: 57 SEPEVKKIIGETDVDVIVGGPPCQGFSLAG 86
>gi|307152213|ref|YP_003887597.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306982441|gb|ADN14322.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 317
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAK 58
+++ DLFCGIGG R+ Q N++ C FSS+I+P + + Y F DI K
Sbjct: 12 VIRYIDLFCGIGGFRIAASQVCLEYNIKPQCVFSSDIDPDAQQVYSKYFGEKPAG-DITK 70
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
I IPDH +LLAGFPCQPFS G
Sbjct: 71 IPADSIPDHHLLLAGFPCQPFSICG 95
>gi|169823657|ref|YP_001691160.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328]
gi|167832277|dbj|BAG09192.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328]
Length = 332
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61
K+ LF G+GGI + E+ E +++EI+ + +TY+ NFP DI ++
Sbjct: 4 KVISLFAGVGGIDIGFEKA----GFETIYANEIDEKARQTYKLNFPEVFLDSRDIRDVQK 59
Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83
DIP V+++GFPCQ FS AG
Sbjct: 60 DDIPHEASVVVSGFPCQSFSIAG 82
>gi|157368818|ref|YP_001476807.1| DNA cytosine methylase [Serratia proteamaculans 568]
gi|157320582|gb|ABV39679.1| DNA-cytosine methyltransferase [Serratia proteamaculans 568]
Length = 491
Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+ + + + DI
Sbjct: 112 FRFIDLFAGIGGIRKGFE----EIGGQCVFTSEWNKEAVRTYKANWYCDPAHHKFNSDIR 167
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
+I ++IPDHDVLLAGFPCQPFS AG
Sbjct: 168 EITLSENDDISDQEAYKNIDKEIPDHDVLLAGFPCQPFSLAG 209
>gi|225375779|ref|ZP_03753000.1| hypothetical protein ROSEINA2194_01411 [Roseburia inulinivorans
DSM 16841]
gi|225212376|gb|EEG94730.1| hypothetical protein ROSEINA2194_01411 [Roseburia inulinivorans
DSM 16841]
Length = 431
Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
++ DLF GIGG R L + N C E++ Y+ K YQ + D I
Sbjct: 6 IQFFDLFSGIGGFREGLRRAG---NFVCVGHCEVDTYADKNYQLLFDTEGEWYCNDARTI 62
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ + +PD D+L AGFPCQ FS AG
Sbjct: 63 EPERMPDFDLLCAGFPCQAFSIAG 86
>gi|311279100|ref|YP_003941331.1| DNA-cytosine methyltransferase [Enterobacter cloacae SCF1]
gi|308748295|gb|ADO48047.1| DNA-cytosine methyltransferase [Enterobacter cloacae SCF1]
Length = 492
Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ + + + DI
Sbjct: 108 FRFIDLFAGIGGIRHGFE----AIGGQCVFTSEWNKHAVRTYKANWYCSPQDHQFNDDIR 163
Query: 58 KIKTQDIP----------------DHDVLLAGFPCQPFSQAG 83
+ P HDVLLAGFPCQPFS AG
Sbjct: 164 SVTLSHQPNVTDGEAAEHIRGVIPQHDVLLAGFPCQPFSLAG 205
>gi|296103580|ref|YP_003613726.1| DNA cytosine methylase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295058039|gb|ADF62777.1| DNA cytosine methylase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 471
Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN+ DI
Sbjct: 86 FRFIDLFAGIGGIRHGFE----AIGGQCVFTSEWNKHAVRTYKANWYCDPDAHQFNADIR 141
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q+IP HDVLLAGFPCQPFS AG
Sbjct: 142 DVTLSHKSGVSDEEAAEHIRQNIPAHDVLLAGFPCQPFSLAG 183
>gi|238787820|ref|ZP_04631617.1| Modification methylase EcoRII [Yersinia frederiksenii ATCC 33641]
gi|238724163|gb|EEQ15806.1| Modification methylase EcoRII [Yersinia frederiksenii ATCC 33641]
Length = 475
Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE NPY+V+TY+AN+ DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----AIGGQCVFTSEWNPYAVRTYKANWYCDPVEHRFNSDIR 151
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
+I + PDHDVLLAGFPCQPFS AG
Sbjct: 152 EITLSENTEISDEEAYRNIDEHIPDHDVLLAGFPCQPFSLAG 193
>gi|294794108|ref|ZP_06759245.1| DNA (cytosine-5-)-methyltransferase [Veillonella sp. 3_1_44]
gi|294455678|gb|EFG24050.1| DNA (cytosine-5-)-methyltransferase [Veillonella sp. 3_1_44]
Length = 527
Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKI 59
MLK DLF G GG+ L E T + ++EIN + TY+ N I I
Sbjct: 1 MLKTIDLFAGAGGLSLGFEMTGK---FKVLAAAEINKNAQATYKKNIVEGKPTFTMIEDI 57
Query: 60 KTQDI-------PDHDVLLAGFPCQPFSQA 82
D DV++ G PCQ FS A
Sbjct: 58 NGYDFMELNEKLGGIDVVIGGPPCQGFSNA 87
>gi|124009653|ref|ZP_01694325.1| site-specific DNA-methyltransferase [Microscilla marina ATCC
23134]
gi|123984703|gb|EAY24688.1| site-specific DNA-methyltransferase [Microscilla marina ATCC
23134]
Length = 354
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-K 60
++ LF G+GG L F+ E NP+ + +P+T+ + DI +
Sbjct: 1 MRHASLFSGLGGFDL----AAQRMGWTNVFTVENNPFCQTILRHYWPDTIHYEDIRQTDF 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
T D+L GFPCQPFSQAG
Sbjct: 57 TPHYGQIDLLTGGFPCQPFSQAG 79
>gi|146298415|ref|YP_001193006.1| DNA-cytosine methyltransferase [Flavobacterium johnsoniae UW101]
gi|146152833|gb|ABQ03687.1| DNA-cytosine methyltransferase [Flavobacterium johnsoniae UW101]
Length = 329
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ L+ G+GGI L ++ E +++E + + TY+ NF + LI GD+ +
Sbjct: 4 TVGSLYAGVGGICLGFKKA----GFELEWANEFDKNACITYKNNFEHNLIEGDVMALDVT 59
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ ++L AGFPCQPFS AG
Sbjct: 60 SLKKINILTAGFPCQPFSVAG 80
>gi|327403407|ref|YP_004344245.1| DNA-cytosine methyltransferase [Fluviicola taffensis DSM 16823]
gi|327318915|gb|AEA43407.1| DNA-cytosine methyltransferase [Fluviicola taffensis DSM 16823]
Length = 422
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL L+ + +C F+SE + + KTYQANF
Sbjct: 97 FKFIDLFAGIGGFRLALQ----NLGGKCVFTSEWDEQAKKTYQANFGEIPFGDITKDSTK 152
Query: 62 QDIPD-HDVLLAGFPCQPFSQAG 83
IPD DVL GFPCQ FS AG
Sbjct: 153 AFIPDGFDVLCGGFPCQAFSIAG 175
>gi|126657178|ref|ZP_01728344.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. CCY0110]
gi|126621449|gb|EAZ92160.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. CCY0110]
Length = 433
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---------D 55
DLF G+GG+ L EQ + S EI+P + NFP
Sbjct: 9 VDLFAGVGGMTLGFEQA----GFDVLASVEIDPIHCSIHHYNFPFWTTICTSVTKITANQ 64
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I ++ DV+ G PCQ FS G
Sbjct: 65 IRELSKIKNKPIDVVFGGPPCQGFSLMG 92
>gi|311742739|ref|ZP_07716548.1| DNA (cytosine-5-)-methyltransferase [Aeromicrobium marinum DSM
15272]
gi|311314367|gb|EFQ84275.1| DNA (cytosine-5-)-methyltransferase [Aeromicrobium marinum DSM
15272]
Length = 428
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGG L EC ++SEI+ + K YQ N+ + + +
Sbjct: 8 FTFIDLFAGIGGFHAALS----ELGGECVYASEIDEAAAKIYQHNWNMPVAGDIVPETDP 63
Query: 62 Q-DIPDHDVLLAGFPCQPFSQAG 83
+P HDVL AGFPCQPFS++G
Sbjct: 64 VVKVPPHDVLAAGFPCQPFSKSG 86
>gi|146312197|ref|YP_001177271.1| DNA cytosine methylase [Enterobacter sp. 638]
gi|145319073|gb|ABP61220.1| DNA-cytosine methyltransferase [Enterobacter sp. 638]
Length = 471
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ + + DI
Sbjct: 86 FRFVDLFAGIGGIRHGFE----AIGGQCVFTSEWNKHAVRTYKANWYCDPHTHQFNEDIR 141
Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83
+ IP HDVLLAGFPCQPFS AG
Sbjct: 142 DVTLSHKSGVTDAEAADHIRRTIPAHDVLLAGFPCQPFSLAG 183
>gi|261379604|ref|ZP_05984177.1| modification methylase EcoRII [Neisseria subflava NJ9703]
gi|284798084|gb|EFC53431.1| modification methylase EcoRII [Neisseria subflava NJ9703]
Length = 320
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
DLF GIGG L +C F+SE + + KTY+ N +IK
Sbjct: 6 FTFIDLFAGIGGFHFAL----KELRGKCVFASEWDKNAQKTYEVNHNLKPLGDITKQEIK 61
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
Q D+L AGFPCQ FS AG
Sbjct: 62 DQIPEKFDILCAGFPCQAFSIAG 84
>gi|82776352|ref|YP_402701.1| DNA cytosine methylase [Shigella dysenteriae Sd197]
gi|309789422|ref|ZP_07684012.1| DNA-cytosine methyltransferase [Shigella dysenteriae 1617]
gi|81240500|gb|ABB61210.1| DNA cytosine methylase [Shigella dysenteriae Sd197]
gi|308922816|gb|EFP68333.1| DNA-cytosine methyltransferase [Shigella dysenteriae 1617]
Length = 472
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHRFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|315657354|ref|ZP_07910236.1| modification methylase NgoPII [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315491826|gb|EFU81435.1| modification methylase NgoPII [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 355
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP------YSVKTYQANFPNTLIFGD 55
+ + LF G GG+ L EQ ++E +P + + +
Sbjct: 1 MNVISLFSGCGGLDLGFEQA----GFNIPVANEFDPTIYETFKANHPHTHLIEGDIRGVT 56
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I I + D ++ G PCQ +S+AG
Sbjct: 57 IEDIAPFVDGEVDGIIGGPPCQSWSEAG 84
>gi|109947509|ref|YP_664737.1| methylase [Helicobacter acinonychis str. Sheeba]
gi|109714730|emb|CAJ99738.1| methylase [Helicobacter acinonychis str. Sheeba]
Length = 177
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ LF GIGG E F E +++E++ + TY+ANF + L+ DI +
Sbjct: 1 MEVGSLFAGIGGF----ECMFLQAGFEIGWANELDKDACNTYRANFKHKLLEQDIKDLNP 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++ D ++ AGFPCQ FS AG
Sbjct: 57 NELEDVGLISAGFPCQAFSIAG 78
>gi|332881189|ref|ZP_08448845.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332680863|gb|EGJ53804.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 367
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI DLF GIGG L ++ + SEI+ +++ Y+ NFPN GDI I+
Sbjct: 1 MKIIDLFSGIGGFSLGFQRASYQ--FTEHYFSEIDKHAIANYKYNFPNAKHIGDITTIQP 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++ D++ G PC FS AG
Sbjct: 59 ANLAGADIITFGSPCVDFSVAG 80
>gi|288928693|ref|ZP_06422539.1| modification methylase NgoBI (Cytosine-specific methyltransferase
NgoBI) [Prevotella sp. oral taxon 317 str. F0108]
gi|288329677|gb|EFC68262.1| modification methylase NgoBI (Cytosine-specific methyltransferase
NgoBI) [Prevotella sp. oral taxon 317 str. F0108]
Length = 309
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M++ DLF GIGGIR+ + +C FSSE + + KTY ANF + DI KI
Sbjct: 1 MVRYVDLFAGIGGIRIPF----DELGAQCVFSSEWDKAACKTYAANFGDIPSG-DITKIA 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+DIP H +LLAGFPCQ FS G
Sbjct: 56 AEDIPPHQLLLAGFPCQAFSIMG 78
>gi|260913722|ref|ZP_05920198.1| modification methylase NgoPII [Pasteurella dagmatis ATCC 43325]
gi|260632261|gb|EEX50436.1| modification methylase NgoPII [Pasteurella dagmatis ATCC 43325]
Length = 329
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+K+ LF G GG+ L E+ E ++E + T++AN P T I GDI IK
Sbjct: 1 MKVISLFSGCGGLDLGFEKA----GFEIPVANEYDKTIWATFKANHPKTKLIEGDIRSIK 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
D P+ D ++ G PCQ +S+AG
Sbjct: 57 EDDFPNEIDGIIGGPPCQSWSEAG 80
>gi|259909642|ref|YP_002649998.1| DNA cytosine methylase [Erwinia pyrifoliae Ep1/96]
gi|224965264|emb|CAX56796.1| Cytosine-specific methyltransferase [Erwinia pyrifoliae Ep1/96]
gi|261863687|gb|ACY01298.1| unknown [Erwinia pyrifoliae]
gi|283479721|emb|CAY75637.1| DNA cytosine methylase [Erwinia pyrifoliae DSM 12163]
Length = 473
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----EIGGQCVFTSEWNKDAVRTYKANWYNDEEVHRFNFDIR 151
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
++ D PDHDVLLAGFPCQPFS AG
Sbjct: 152 EVTLSDRPEVREDDAYRNIDKEIPDHDVLLAGFPCQPFSLAG 193
>gi|159795737|pdb|2Z6A|A Chain A, S-Adenosyl-L-Methionine-Dependent Methyl Transfer:
Observable Precatalytic Intermediates During Dna
Cytosine Methylation
Length = 327
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ DLF G+GG RL LE EC +S+E + Y+ + Y+ NF DI ++
Sbjct: 12 LRFIDLFAGLGGFRLALE----SCGAECVYSNEWDKYAQEVYEMNFGEKPEG-DITQVNE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ IPDHD+L AGFP Q FS +G
Sbjct: 67 KTIPDHDILCAGFPAQAFSISG 88
>gi|296313785|ref|ZP_06863726.1| modification methylase NgoPII [Neisseria polysaccharea ATCC
43768]
gi|296839714|gb|EFH23652.1| modification methylase NgoPII [Neisseria polysaccharea ATCC
43768]
Length = 330
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+KI LF G GG+ L E+ E ++E + T++AN P T I GDI IK
Sbjct: 1 MKIISLFSGCGGLDLGFEKA----GFEVPVANEYDKTIWSTFKANHPKTHLIEGDIRSIK 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+D PD D ++ G PCQ +S+AG
Sbjct: 57 EEDFPDEIDGIIGGPPCQSWSEAG 80
>gi|227357019|ref|ZP_03841390.1| DNA-cytosine methyltransferase [Proteus mirabilis ATCC 29906]
gi|261345118|ref|ZP_05972762.1| DNA (cytosine-5-)-methyltransferase [Providencia rustigianii DSM
4541]
gi|227162822|gb|EEI47782.1| DNA-cytosine methyltransferase [Proteus mirabilis ATCC 29906]
gi|282566805|gb|EFB72340.1| DNA (cytosine-5-)-methyltransferase [Providencia rustigianii DSM
4541]
Length = 301
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K++ F GIGG L LE++ + F EIN + N+P+ ++ DI +K
Sbjct: 9 YKVSSFFAGIGGFDLGLERS----GMNVVFQCEINKFCQSVLNKNWPDIPLYTDITNLKA 64
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
DIPD +V GFPCQ S A
Sbjct: 65 NDIPDSNVWCGGFPCQDVSSA 85
>gi|157145245|ref|YP_001452564.1| DNA cytosine methylase [Citrobacter koseri ATCC BAA-895]
gi|157082450|gb|ABV12128.1| hypothetical protein CKO_00981 [Citrobacter koseri ATCC BAA-895]
Length = 477
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 92 FRFVDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYYCDPQRHHFNEDIR 147
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 148 DITLSHRDGVSDSEAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189
>gi|310767946|gb|ADP12896.1| DNA cytosine methylase [Erwinia sp. Ejp617]
Length = 467
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 47/102 (46%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ + + DI
Sbjct: 93 FRFIDLFAGIGGIRSGFE----AIGGQCVFTSEWNKHAVRTYKANWYCDERQHRFNQDIR 148
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q +PDHDVLLAGFPCQPFS AG
Sbjct: 149 DVTLSGKPEITDRQAYQHIQQQVPDHDVLLAGFPCQPFSLAG 190
>gi|292488627|ref|YP_003531511.1| DNA cytosine methylase [Erwinia amylovora CFBP1430]
gi|292899788|ref|YP_003539157.1| modification methylase EcoRII [Erwinia amylovora ATCC 49946]
gi|291199636|emb|CBJ46755.1| modification methylase EcoRII [Erwinia amylovora ATCC 49946]
gi|291554058|emb|CBA21160.1| DNA cytosine methylase [Erwinia amylovora CFBP1430]
gi|312172770|emb|CBX81026.1| DNA cytosine methylase [Erwinia amylovora ATCC BAA-2158]
Length = 469
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 47/102 (46%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ + + DI
Sbjct: 95 FRFIDLFAGIGGIRSGFE----AIGGQCVFTSEWNKHAVRTYKANWYCDERQHRFNQDIR 150
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q +PDHDVLLAGFPCQPFS AG
Sbjct: 151 DVTLSGKPEISDRQAYQHIQQQVPDHDVLLAGFPCQPFSLAG 192
>gi|323968854|gb|EGB64190.1| DNA-cytosine methyltransferase [Escherichia coli TA007]
Length = 272
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ DLF GIGG RL QT V FSSE + ++ KTY AN+ + DI KI
Sbjct: 72 YRMIDLFAGIGGTRLGFHQTNA---VNVVFSSEWDKFAQKTYHANYGDFPDG-DITKIDE 127
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIPDH++L+ GFPC FSQAG
Sbjct: 128 KDIPDHEILVGGFPCVAFSQAG 149
>gi|262043463|ref|ZP_06016586.1| DNA (cytosine-5-)-methyltransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039205|gb|EEW40353.1| DNA (cytosine-5-)-methyltransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 477
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 44/102 (43%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ + + DI
Sbjct: 92 FRFIDLFAGIGGIRSGFE----AIGGQCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 147
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
I P HDVLLAGFPCQPFS AG
Sbjct: 148 DITLSQRSDVSDEEAARHIRESIPQHDVLLAGFPCQPFSLAG 189
>gi|238895488|ref|YP_002920223.1| DNA cytosine methylase [Klebsiella pneumoniae NTUH-K2044]
gi|330000908|ref|ZP_08303852.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. MS 92-3]
gi|238547805|dbj|BAH64156.1| DNA cytosine methylase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|328537840|gb|EGF64032.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. MS 92-3]
Length = 477
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 44/102 (43%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ + + DI
Sbjct: 92 FRFIDLFAGIGGIRSGFE----AIGGQCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 147
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
I P HDVLLAGFPCQPFS AG
Sbjct: 148 DITLSQRSDVSDEEAARHIRESIPQHDVLLAGFPCQPFSLAG 189
>gi|152970972|ref|YP_001336081.1| DNA cytosine methylase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|150955821|gb|ABR77851.1| DNA cytosine methylase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 477
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 44/102 (43%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ + + DI
Sbjct: 92 FRFIDLFAGIGGIRSGFE----AIGGQCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 147
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
I P HDVLLAGFPCQPFS AG
Sbjct: 148 DITLSQRSDVSDEEAARHIRESIPQHDVLLAGFPCQPFSLAG 189
>gi|1657420|gb|AAC45971.1| DNA cytosine methyltransferase M.SenPI [Salmonella enterica subsp.
enterica serovar Enteritidis]
Length = 379
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ DLF GIGG RL QT V FSSE + ++ KTY AN+ + DI KI
Sbjct: 72 YRMIDLFAGIGGTRLGFHQTNA---VNVVFSSEWDKFAQKTYHANYGDFPDG-DITKIDE 127
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIPDH++L+ GFPC FSQAG
Sbjct: 128 KDIPDHEILVGGFPCVAFSQAG 149
>gi|1871451|dbj|BAA11167.1| C5-cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhi]
gi|3421011|emb|CAA76526.1| M.Ecl18kI (DNA-methyltransferase) [Enterobacter cloacae]
Length = 379
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ DLF GIGG RL QT V FSSE + ++ KTY AN+ + DI KI
Sbjct: 72 YRMIDLFAGIGGTRLGFHQTNA---VNVVFSSEWDKFAQKTYHANYGDFPDG-DITKIDE 127
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIPDH++L+ GFPC FSQAG
Sbjct: 128 KDIPDHEILVGGFPCVAFSQAG 149
>gi|32470131|ref|NP_863573.1| DNA-methyltransferase MKpn2kI [Klebsiella pneumoniae]
gi|462656|sp|P34879|MTS2_SHISO RecName: Full=Modification methylase SsoII; Short=M.SsoII; AltName:
Full=Cytosine-specific methyltransferase SsoII
gi|11559818|gb|AAG38101.1|AF300473_2 DNA-methyltransferase MKpn2kI [Klebsiella pneumoniae]
gi|294244|gb|AAA98279.1| C5-cytosine methylase [Plasmid P4]
Length = 379
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ DLF GIGG RL QT V FSSE + ++ KTY AN+ + DI KI
Sbjct: 72 YRMIDLFAGIGGTRLGFHQTNA---VNVVFSSEWDKFAQKTYHANYGDFPDG-DITKIDE 127
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIPDH++L+ GFPC FSQAG
Sbjct: 128 KDIPDHEILVGGFPCVAFSQAG 149
>gi|7243959|gb|AAB21481.2| cytosine DNA methyltransferase homolog [Neisseria gonorrhoeae]
Length = 347
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI LF G GG+ L Q E ++++ + ++ ++++ N + ++ GDI +I
Sbjct: 17 KILSLFSGCGGLYLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPN 72
Query: 63 DI--PDHDVLLAGFPCQPFSQ 81
D PD D++L GFPCQ FS
Sbjct: 73 DPTIPDCDIILGGFPCQDFSM 93
>gi|304390097|ref|ZP_07372051.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326579|gb|EFL93823.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 355
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP------YSVKTYQANFPNTLIFGD 55
+ + LF G GG+ L EQ ++E +P + + +
Sbjct: 1 MNVISLFSGCGGLDLGFEQA----GFNIPVANEFDPTIYETFKANHPHTHLIEGDIRGVT 56
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I I + D ++ G PCQ +S+AG
Sbjct: 57 IEDIAPFVDGEVDGIIGGPPCQSWSEAG 84
>gi|295098276|emb|CBK87366.1| DNA-methyltransferase (dcm) [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 477
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 49/102 (48%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN+ DI
Sbjct: 92 FRFIDLFAGIGGIRHGFE----AIGGQCVFTSEWNKHAVRTYKANWYCDPDAHQFNADIR 147
Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83
+ IP HDVLLAGFPCQPFS AG
Sbjct: 148 DVTLSHKTGVSDEEAAEHIRNTIPAHDVLLAGFPCQPFSLAG 189
>gi|237713924|ref|ZP_04544405.1| C-5 cytosine-specific DNA-methylase [Bacteroides sp. D1]
gi|262409168|ref|ZP_06085712.1| C-5 cytosine-specific DNA-methylase [Bacteroides sp. 2_1_22]
gi|229446080|gb|EEO51871.1| C-5 cytosine-specific DNA-methylase [Bacteroides sp. D1]
gi|262352915|gb|EEZ02011.1| C-5 cytosine-specific DNA-methylase [Bacteroides sp. 2_1_22]
Length = 361
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF G+GG RL ++ + +C FSSE N Y+ KTY ANF ++
Sbjct: 29 FTFIDLFAGMGGFRLAMQ----AQGGKCVFSSEWNKYAQKTYLANFGEMPFGDITKEVTK 84
Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83
IP + D+L AGFPCQPFS AG
Sbjct: 85 SYIPQYFDILCAGFPCQPFSIAG 107
>gi|150007509|ref|YP_001302252.1| site-specific DNA-methyltransferase [Parabacteroides distasonis
ATCC 8503]
gi|149935933|gb|ABR42630.1| site-specific DNA-methyltransferase [Parabacteroides distasonis
ATCC 8503]
Length = 427
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-K 60
+ LF G+GG L E E F EIN + K + +FP ++ + DI +
Sbjct: 1 MTHGSLFSGVGGFDLAAEW----MGWENLFHCEINEWCQKVLRFHFPKSIQYDDITRTDF 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
T DVL GFPCQPFS AG
Sbjct: 57 TPWRGKVDVLTGGFPCQPFSTAG 79
>gi|313123965|ref|YP_004034224.1| modification methylase rho11Si family protein [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312280528|gb|ADQ61247.1| Modification methylase Rho11sI family protein [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 349
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59
+K DLF GIGG LE+ C E + ++ ++YQA + DI +
Sbjct: 1 MKFIDLFAGIGGFHTGLEKA----GHTCVGWVEWDKFARQSYQAIYDTDGLYTATDIQDV 56
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K D+PD D+ G PC S AG
Sbjct: 57 KGVDLPDADLWTFGSPCTDISLAG 80
>gi|228469860|ref|ZP_04054799.1| modification methylase HaeIII [Porphyromonas uenonis 60-3]
gi|228308495|gb|EEK17283.1| modification methylase HaeIII [Porphyromonas uenonis 60-3]
Length = 359
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+ + LF G GG+ L + ++E + T++ NFP+ + GDI KI
Sbjct: 3 MTLISLFSGAGGMDLGFHKA----GFTTILANEYDKTICPTFKHNFPDVPLLEGDIRKIP 58
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+ P H D ++ G PCQ +S+AG
Sbjct: 59 ERLFPRHIDGIIGGPPCQSWSEAG 82
>gi|91782477|ref|YP_557683.1| C-5 cytosine-specific DNA methylase [Burkholderia xenovorans LB400]
gi|91686431|gb|ABE29631.1| C-5 cytosine-specific DNA methylase [Burkholderia xenovorans LB400]
Length = 418
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/86 (45%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----IA 57
++ DLF GIGGIR E C F+SE N +S KTYQ N+ + I
Sbjct: 69 FRLVDLFAGIGGIRRGFE----AHGGRCVFTSEWNDFSKKTYQENYRDCDDAHQFVGDIV 124
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
+P HDVLLAGFPCQPFS AG
Sbjct: 125 SFDVASVPSHDVLLAGFPCQPFSIAG 150
>gi|255280633|ref|ZP_05345188.1| modification methylase DdeI [Bryantella formatexigens DSM 14469]
gi|255269098|gb|EET62303.1| modification methylase DdeI [Bryantella formatexigens DSM 14469]
Length = 378
Score = 81.5 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 13/92 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
MLK DLF G GGI + C +++I+ + T+ N P D+ ++
Sbjct: 1 MLKTIDLFAGAGGITEGFRKA----GYVCVCANDIDEEAKHTFTYNHPTVPFVLKDVREV 56
Query: 60 K--------TQDIPDHDVLLAGFPCQPFSQAG 83
+ DV+ G PCQ FS AG
Sbjct: 57 TAAELLAAANCTAAEIDVITGGPPCQGFSLAG 88
>gi|320326214|gb|EFW82269.1| cytosine-specific DNA-methyltransferase [Pseudomonas syringae pv.
glycinea str. B076]
Length = 448
Score = 81.5 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF G+GG L L + EC F++E ++ GDI +
Sbjct: 4 FRFVDLFAGLGGFHLAL----DRLGGECVFAAEW-KEHLREIYNVNFGLYPAGDITSVSL 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIPDHDVL AGFPCQPFS+AG
Sbjct: 59 KDIPDHDVLTAGFPCQPFSKAG 80
>gi|292670760|ref|ZP_06604186.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292647381|gb|EFF65353.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 476
Score = 81.5 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG L V ++SEI P+ +FPN FGDI +I
Sbjct: 1 MTLGSLFDGIGGWLLAARHA----GVTPVWASEIEPFPCSVTARHFPNVKQFGDITQIDP 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+I D++ AG PCQ S AG
Sbjct: 57 DEIDPVDIICAGSPCQDLSIAG 78
>gi|149190453|ref|ZP_01868724.1| DNA-cytosine methyltransferase [Vibrio shilonii AK1]
gi|148835707|gb|EDL52673.1| DNA-cytosine methyltransferase [Vibrio shilonii AK1]
Length = 373
Score = 81.5 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K+ F GIGG L E+ +E F E+N + K + ++P+ + DI +
Sbjct: 81 FKVASFFAGIGGFDLGCERA----GMEVVFQCEVNSFCQKVLKKHWPSIPLHSDIKTLSA 136
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
DIPD ++ GFPCQ S A
Sbjct: 137 SDIPDANIWCGGFPCQDVSLA 157
>gi|330996255|ref|ZP_08320145.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila
YIT 11841]
gi|329573759|gb|EGG55350.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila
YIT 11841]
Length = 351
Score = 81.5 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-K 60
L LF GIGG L E T F EIN + + +FPN + DI K
Sbjct: 5 LTHGSLFSGIGGFDLAAEWT----GWTNVFHCEINEFCTRILNHHFPNAEHYADITKTDF 60
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
T DVL GFPCQPFS AG
Sbjct: 61 TPWRGRIDVLSGGFPCQPFSLAG 83
>gi|329121769|ref|ZP_08250386.1| DNA (cytosine-5-)-methyltransferase [Dialister micraerophilus DSM
19965]
gi|327468239|gb|EGF13725.1| DNA (cytosine-5-)-methyltransferase [Dialister micraerophilus DSM
19965]
Length = 416
Score = 81.5 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------FGD 55
+K+ DLF G+GG L L + N E ++++ P + N D
Sbjct: 6 IKVVDLFAGVGGFHLGLSRASNR--YEVVWANQYEPSRKNQFAYNIYKKNFPKTPISNED 63
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
I KI +IP D+L+AGFPCQ +S A
Sbjct: 64 IRKINKDEIPKMDLLVAGFPCQDYSVA 90
>gi|325690436|gb|EGD32439.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis
SK115]
Length = 390
Score = 81.5 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+ D F GIGG R LE T ++C E + ++ K+Y DI I
Sbjct: 3 ITFLDFFAGIGGFRCGLELT----GMKCIGYCEKDKFARKSYEAMYETKGEWFHDDITSI 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+P D+ AG PCQ S AG
Sbjct: 59 NPAQLPKADLWCAGSPCQNLSIAG 82
>gi|284053792|ref|ZP_06384002.1| cytosine-specific DNA methylase [Arthrospira platensis str. Paraca]
gi|291570060|dbj|BAI92332.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
Length = 418
Score = 81.5 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 31/89 (34%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
DLF G+GGI Q S EINP + + GD+
Sbjct: 76 YNFIDLFSGVGGITQGFWQA----GFNPVASVEINPIASATHQRNFPNCHHFCGDVNDFN 131
Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83
P +++ G PCQ FS AG
Sbjct: 132 PHQWLSKIGSPSVHLVVGGPPCQGFSVAG 160
>gi|298346143|ref|YP_003718830.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC
43063]
gi|298236204|gb|ADI67336.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC
43063]
Length = 355
Score = 81.5 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP------YSVKTYQANFPNTLIFGD 55
+ + LF G GG+ L EQ ++E +P + + +
Sbjct: 1 MNVISLFSGCGGLDLGFEQA----GFNIPVANEFDPTIYETFKANHPHTHLIEGDIRGVT 56
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I I + D ++ G PCQ +S+AG
Sbjct: 57 IEDIAPFVDGEVDGIIGGPPCQSWSEAG 84
>gi|111607698|gb|ABH10736.1| DNA methyltransferase [Flavobacterium sp. 4H]
Length = 408
Score = 81.5 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL L+ + +C F+SE N + KTY+ NF +
Sbjct: 95 FKFIDLFAGIGGFRLALQ----NVGGKCVFTSEWNNEAQKTYRENFGEVPFGDITKERNK 150
Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83
IP D+L AGFPCQ FS AG
Sbjct: 151 NYIPEKFDILCAGFPCQAFSIAG 173
>gi|82752078|ref|YP_417819.1| DNA modification methylase [Staphylococcus aureus RF122]
gi|82657609|emb|CAI82057.1| DNA modification methylase [Staphylococcus aureus RF122]
Length = 402
Score = 81.5 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIP 65
F G+GGI L QT +++E + + TY+ NF N DI +KT +IP
Sbjct: 18 FFSGVGGIELGFHQTNK---FRVVYANEFDKNAQITYENNFNNVSLDCRDIHDVKTSEIP 74
Query: 66 DHDVLLAGFPCQPFSQAG 83
DV++ GFPCQ FS AG
Sbjct: 75 MSDVIVGGFPCQAFSIAG 92
>gi|262283394|ref|ZP_06061160.1| cytosine-specific methyltransferase NlaX [Streptococcus sp.
2_1_36FAA]
gi|262260885|gb|EEY79585.1| cytosine-specific methyltransferase NlaX [Streptococcus sp.
2_1_36FAA]
Length = 460
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKI 59
+K DLF GIGG RL +E +C E++ ++ K+Y+A F DI +
Sbjct: 1 MKFLDLFAGIGGFRLGMEAA----GHQCVGFCEVDGFARKSYKAIFNTEKEVELHDIRSV 56
Query: 60 KTQDI---PDHDVLLAGFPCQPFSQAG 83
+ I D+L GFPCQ FS AG
Sbjct: 57 PDESIRGLGQVDILCGGFPCQSFSLAG 83
>gi|40218563|gb|AAR83217.1| chromosome partitioning protein parB [Streptococcus pyogenes]
gi|50261608|gb|AAT72376.1| methylase [Streptococcus pyogenes]
Length = 388
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
L D F GIGG R LE + C E + ++V + DI K+
Sbjct: 4 LTFIDFFAGIGGFRRGLELA----GMTCIGYCEKDKFAVRSYQAMYDTEGEWYSDDITKL 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K DIP D+ AG PCQ S AG
Sbjct: 60 KPNDIPKADIWTAGSPCQNVSIAG 83
>gi|50914489|ref|YP_060461.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10394]
gi|50903563|gb|AAT87278.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10394]
Length = 422
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
L D F GIGG R LE + C E + ++V + DI K+
Sbjct: 4 LTFIDFFAGIGGFRRGLELA----GMTCIGYCEKDKFAVRSYQAMYDTEGEWYSDDITKL 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K DIP D+ AG PCQ S AG
Sbjct: 60 KPNDIPKADIWTAGSPCQNVSIAG 83
>gi|291085206|ref|ZP_06352388.2| DNA (cytosine-5-)-methyltransferase [Citrobacter youngae ATCC
29220]
gi|291072321|gb|EFE10430.1| DNA (cytosine-5-)-methyltransferase [Citrobacter youngae ATCC
29220]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY----QANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANNYCDPLQHRFNEDIR 146
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
I P+HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHHDGVSDQQAAEHIRQHVPEHDVLLAGFPCQPFSLAG 188
>gi|237732007|ref|ZP_04562488.1| DNA cytosine methylase [Citrobacter sp. 30_2]
gi|226907546|gb|EEH93464.1| DNA cytosine methylase [Citrobacter sp. 30_2]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY----QANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANNYCDPLQHRFNEDIR 146
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
I P+HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHHDGVSDQQAAEHIRQHVPEHDVLLAGFPCQPFSLAG 188
>gi|153940750|ref|YP_001392502.1| hypothetical protein CLI_3290 [Clostridium botulinum F str.
Langeland]
gi|152936646|gb|ABS42144.1| conserved domain protein [Clostridium botulinum F str. Langeland]
Length = 338
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIAK 58
L D F G+GG R +E + +C E + ++ +Y+ DI
Sbjct: 3 LTFIDFFAGVGGFRKGMEMADH----KCVGHCEWDKFANMSYKEIHSPKEDEWFGTDIRN 58
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+K ++P D GFPCQ S AG
Sbjct: 59 VKATELPRADCWCFGFPCQDISVAG 83
>gi|27497145|gb|AAO17336.1| methylase [Neisseria lactamica]
Length = 384
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
DLF GIGG R+ ++ + EC FSSE + + + + K
Sbjct: 58 FTFIDLFAGIGGFRIAMQ----NLGGECVFSSEWDEKAKQTYEANFGEVPFGDITLEETK 113
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DVL AGFPCQ FS AG
Sbjct: 114 QCIPEQFDVLCAGFPCQAFSIAG 136
>gi|167751790|ref|ZP_02423917.1| hypothetical protein ALIPUT_00030 [Alistipes putredinis DSM
17216]
gi|167660688|gb|EDS04818.1| hypothetical protein ALIPUT_00030 [Alistipes putredinis DSM
17216]
Length = 318
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ LF GIGG L E F+ EI+P+ K + +FPN + DI
Sbjct: 1 MTHASLFSGIGGFDLAAEWA----GWTNAFNCEIDPFCRKVLKYHFPNAEQYEDIRTTDF 56
Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83
D DVL GFPCQPFS AG
Sbjct: 57 TVWKDRIDVLTGGFPCQPFSLAG 79
>gi|126700764|ref|YP_001089661.1| putative DNA-methyltransferase [Clostridium difficile 630]
gi|115252201|emb|CAJ70040.1| putative DNA-methyltransferase [Clostridium difficile]
Length = 541
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M + DLF G GG+ L E T E N + KTY N P+ + DI ++
Sbjct: 1 MYNVIDLFAGAGGLSLGFEMTKK---FNMVAFVEKNDNAAKTYLENHPSVKRYCDIKRLD 57
Query: 61 TQDI----PDHDVLLAGFPCQPFSQA 82
QDI DV++ G PCQ FS A
Sbjct: 58 FQDILNSVDKIDVVIGGPPCQGFSNA 83
>gi|260664324|ref|ZP_05865177.1| DNA-cytosine methyltransferase [Lactobacillus jensenii SJ-7A-US]
gi|260562210|gb|EEX28179.1| DNA-cytosine methyltransferase [Lactobacillus jensenii SJ-7A-US]
Length = 298
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
+K DLF G+GG R LE +C E + ++ K+YQ + + DI
Sbjct: 1 MKFLDLFSGVGGFRTGLEAA----GHKCVGFIEFDKFARKSYQAIYDTKDEFTKNDIRTT 56
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K ++PD + GFPCQ S AG
Sbjct: 57 KGSELPDAGIWCFGFPCQDISIAG 80
>gi|170077471|ref|YP_001734109.1| site-specific DNA-methyltransferase [Synechococcus sp. PCC 7002]
gi|169885140|gb|ACA98853.1| site-specific DNA-methyltransferase [Synechococcus sp. PCC 7002]
Length = 413
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 16/91 (17%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIKTQD 63
DLF G GG+ L LE + + EI+P +++ DI ++ +
Sbjct: 8 IDLFAGCGGMSLGLEAA----GFDVVAAVEIDPVHALVHEVNFPYGVTFCRDIRHLQWPE 63
Query: 64 IPD-----------HDVLLAGFPCQPFSQAG 83
+ D+L G PCQ FS G
Sbjct: 64 MRQAIERRGYSTADIDLLTGGPPCQGFSVMG 94
>gi|238919389|ref|YP_002932904.1| DNA cytosine methylase [Edwardsiella ictaluri 93-146]
gi|238868958|gb|ACR68669.1| modification methylase [Edwardsiella ictaluri 93-146]
Length = 471
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/102 (43%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 94 FRFIDLFAGIGGIRKGFE----SIGGQCVFTSEWNKEAVRTYKANWYNDEDLHTFNMDIR 149
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
+I Q IPDHDVLLAGFPCQPFS AG
Sbjct: 150 EITLSAESDISEHDAYKNINQHIPDHDVLLAGFPCQPFSLAG 191
>gi|218441171|ref|YP_002379500.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
gi|218173899|gb|ACK72632.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
Length = 415
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 21/100 (21%)
Query: 1 MLK--------ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI 52
M+ DLF G GG+ L EQ + + EINP TY+ NFP I
Sbjct: 1 MMNQTTNRRPIAVDLFAGAGGMSLGFEQA----GFDVLAAVEINPIHCATYEYNFPFWTI 56
Query: 53 FGD---------IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I ++ + DV+ G PCQ FS G
Sbjct: 57 ICRSVADIRGEEIRQLSALKNQEIDVVFGGPPCQGFSLMG 96
>gi|113478034|ref|YP_724095.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
gi|110169082|gb|ABG53622.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
Length = 413
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60
LK +LF GIGG L + N++ ++++++ + YQ+NF ++ I DI KI
Sbjct: 29 LKAIELFAGIGGFCLGMRAA----NIKTIWANDVSKLCCQVYQSNFGSSSIVLDDINKIN 84
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+IP+HD+L AGFPCQPFSQAG
Sbjct: 85 LLEIPEHDILTAGFPCQPFSQAG 107
>gi|167920593|ref|ZP_02507684.1| cytosine-specific DNA methylase [Burkholderia pseudomallei
BCC215]
Length = 454
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF G+GG L L+ C +++E + Y+ NF DI I
Sbjct: 4 FRFVDLFAGLGGFHLALQ----RLGGTCVYAAEWQEHLRDLYEVNFGLRPEG-DITLISP 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+D+P HDVL AGFPCQPFS+AG
Sbjct: 59 KDVPSHDVLTAGFPCQPFSKAG 80
>gi|326574028|gb|EGE23977.1| DcmB [Moraxella catarrhalis CO72]
Length = 337
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+KI LF G GG+ L ++ + ++E + T++AN NT I GDI I
Sbjct: 1 MKIISLFSGCGGLDLGFKKA----GFKIAVANEYDKSIWATFKANHHNTKLIEGDIRHIL 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+D P+ D ++ G PCQ +S+AG
Sbjct: 57 EEDFPNDIDGIIGGPPCQSWSEAG 80
>gi|283785730|ref|YP_003365595.1| DNA-cytosine methyltransferase [Citrobacter rodentium ICC168]
gi|282949184|emb|CBG88792.1| DNA-cytosine methyltransferase [Citrobacter rodentium ICC168]
Length = 477
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN+ DI
Sbjct: 92 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYYCDPASHRFNEDIR 147
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q +P HDVLLAGFPCQPFS AG
Sbjct: 148 DITLSHREGISDRQAAEHIRQHVPQHDVLLAGFPCQPFSLAG 189
>gi|67924379|ref|ZP_00517809.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH
8501]
gi|67853772|gb|EAM49101.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH
8501]
Length = 435
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---------D 55
DLF G+GG+ L EQ + S EI+P ++ NFP +
Sbjct: 9 VDLFAGVGGMTLGFEQA----GFDVLASVEIDPIHCSIHRYNFPFWTTICASVTSIKASE 64
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I ++ T DV+ G PCQ FS G
Sbjct: 65 IRELSTIKNKPIDVVFGGPPCQGFSLMG 92
>gi|322616984|gb|EFY13892.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322618223|gb|EFY15115.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322625894|gb|EFY22713.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322626346|gb|EFY23156.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322632761|gb|EFY29506.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322639103|gb|EFY35796.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322640419|gb|EFY37075.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322647220|gb|EFY43719.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322648528|gb|EFY44979.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322655540|gb|EFY51848.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322660318|gb|EFY56556.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322662999|gb|EFY59206.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322668184|gb|EFY64343.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322674057|gb|EFY70151.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322675591|gb|EFY71665.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322682998|gb|EFY79014.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322686692|gb|EFY82670.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323195420|gb|EFZ80600.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323198052|gb|EFZ83169.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323204476|gb|EFZ89482.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323207566|gb|EFZ92514.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323210995|gb|EFZ95855.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323217551|gb|EGA02270.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323226697|gb|EGA10894.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323231573|gb|EGA15686.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236016|gb|EGA20095.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323240586|gb|EGA24629.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323245478|gb|EGA29478.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323247596|gb|EGA31547.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323254424|gb|EGA38240.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323257764|gb|EGA41444.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323262129|gb|EGA45692.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323266252|gb|EGA49742.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270729|gb|EGA54168.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|224583511|ref|YP_002637309.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224468038|gb|ACN45868.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|213650730|ref|ZP_03380783.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
Length = 405
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 20 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 75
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 76 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 117
>gi|200390041|ref|ZP_03216652.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199602486|gb|EDZ01032.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|168259722|ref|ZP_02681695.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205351069|gb|EDZ37700.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|168462467|ref|ZP_02696398.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194443436|ref|YP_002041256.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|238912436|ref|ZP_04656273.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|194402099|gb|ACF62321.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|195634356|gb|EDX52708.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|168244842|ref|ZP_02669774.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194449372|ref|YP_002046042.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194407676|gb|ACF67895.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205336375|gb|EDZ23139.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|197251440|ref|YP_002146032.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197215143|gb|ACH52540.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|168239231|ref|ZP_02664289.1| modification methylase EcoRII (Cytosine-specificmethyltransferase
EcoRII) [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194734985|ref|YP_002115026.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|204931362|ref|ZP_03222061.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|194710487|gb|ACF89708.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197288080|gb|EDY27467.1| modification methylase EcoRII (Cytosine-specificmethyltransferase
EcoRII) [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|204319845|gb|EDZ05054.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|198242597|ref|YP_002215094.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|197937113|gb|ACH74446.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|326622842|gb|EGE29187.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|167552776|ref|ZP_02346527.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205322616|gb|EDZ10455.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|168234164|ref|ZP_02659222.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168821682|ref|ZP_02833682.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194470868|ref|ZP_03076852.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197263635|ref|ZP_03163709.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|194457232|gb|EDX46071.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197241890|gb|EDY24510.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|205331847|gb|EDZ18611.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205341769|gb|EDZ28533.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320085391|emb|CBY95172.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|161613440|ref|YP_001587405.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|205352316|ref|YP_002226117.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207856496|ref|YP_002243147.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|161362804|gb|ABX66572.1| hypothetical protein SPAB_01156 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|205272097|emb|CAR36949.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708299|emb|CAR32602.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326627365|gb|EGE33708.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|62180565|ref|YP_216982.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|62128198|gb|AAX65901.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322715041|gb|EFZ06612.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|56413096|ref|YP_150171.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197362022|ref|YP_002141659.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|56127353|gb|AAV76859.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197093499|emb|CAR58960.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|16765328|ref|NP_460943.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167993566|ref|ZP_02574660.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|16420526|gb|AAL20902.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|205328427|gb|EDZ15191.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|261247157|emb|CBG24980.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267993981|gb|ACY88866.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301158505|emb|CBW18015.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912981|dbj|BAJ36955.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321224636|gb|EFX49699.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|323130270|gb|ADX17700.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|332988880|gb|AEF07863.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|16760934|ref|NP_456551.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29141374|ref|NP_804716.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213424982|ref|ZP_03357732.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|289829483|ref|ZP_06547095.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|25286126|pir||AH0754 site-specific DNA-methyltransferase (cytosine-specific) (EC
2.1.1.73) - Salmonella enterica subsp. enterica serovar
Typhi (strain CT18)
gi|16503231|emb|CAD05739.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137001|gb|AAO68565.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 476
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|2894387|emb|CAA74997.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase
(C2) [Bacillus pumilus]
Length = 392
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59
M+ DLF G GG L L+ ++ + E++ ++ +T++ NFP + +I +
Sbjct: 1 MITSLDLFSGAGGFTLGLKNA----GIKTIGAIELDRFASETFRKNFPEIPHYQANITEY 56
Query: 60 KTQD----IPDHDVLLAGFPCQPFSQAG 83
+ D++ G PCQ FS AG
Sbjct: 57 GDSEIIKLFKGVDIITGGPPCQGFSVAG 84
>gi|79835472|gb|ABB52097.1| Mod [Arthrospira platensis]
Length = 321
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 31/89 (34%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
DLF G+GGI Q S EINP + + GD+
Sbjct: 76 YNFIDLFSGVGGITQGFWQA----GFNPVASVEINPIASATHQRNFPNCHHFCGDVNDFN 131
Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83
P +++ G PCQ FS AG
Sbjct: 132 PHQWLSKIGSPSVHLVVGGPPCQGFSVAG 160
>gi|331668651|ref|ZP_08369499.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA271]
gi|331063845|gb|EGI35756.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli TA271]
Length = 458
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 73 FRFIDLFAGIGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 128
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 129 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 170
>gi|315586449|gb|ADU40830.1| possible DNA (cytosine-5-)-methyltransferase [Helicobacter pylori
35A]
Length = 351
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H + E ++++I+ ++ +YQAN T DI ++
Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPHFELIWANDIDKDAILSYQANHRKTQTILCDIMQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
+ P D+LL G PCQ +S G
Sbjct: 58 NCHNFPCVSIDILLGGPPCQSYSTLG 83
>gi|149369548|ref|ZP_01889400.1| C-5 cytosine-specific DNA-methylase [unidentified eubacterium
SCB49]
gi|149356975|gb|EDM45530.1| C-5 cytosine-specific DNA-methylase [unidentified eubacterium
SCB49]
Length = 421
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG R+ L+ + +C F+SE + YS +TY+ANF
Sbjct: 97 FKFIDLFAGIGGFRMALQ----NLEGKCVFTSEWDKYSKQTYKANFGEIPFGDITRPQTK 152
Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83
IP + DVL AGFPCQ FS AG
Sbjct: 153 SYIPDNFDVLCAGFPCQAFSIAG 175
>gi|317497297|ref|ZP_07955620.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895366|gb|EFV17525.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 385
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGGIR + + +SSE + ++ KTY+ NF DI +
Sbjct: 72 FKQIDLFAGIGGIRQAFQ----RQGGYNVYSSEWDKFAQKTYRINFGEIPDG-DITLVSE 126
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+LLAGFPCQPFSQAG
Sbjct: 127 NDIPDHDILLAGFPCQPFSQAG 148
>gi|295103751|emb|CBL01295.1| DNA-methyltransferase (dcm) [Faecalibacterium prausnitzii SL3/3]
Length = 412
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ +LF G+GG RL LEQ + ++++ P + +
Sbjct: 4 IRVVELFAGVGGFRLGLEQA--SSCFQTVWANQWEPSMRSQFAFECYERHFGHRPEHVCQ 61
Query: 62 Q------DIPDHDVLLAGFPCQPFSQA 82
+IP HD+L+ GFPCQ +S A
Sbjct: 62 DIVTAKGNIPPHDLLVGGFPCQDYSIA 88
>gi|169786848|ref|YP_001700742.1| modification methylase (cytosine-specific
methyltransferase)(HpaIIM-like) [Acinetobacter baumannii
SDF]
gi|169150765|emb|CAP02959.1| modification methylase (Cytosine-specific
methyltransferase)(HpaIIM-like) [Acinetobacter
baumannii]
Length = 366
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG RL + + C FSSEI+ + + +GDI T
Sbjct: 42 FKFIDLFAGIGGFRLAFQ----NLGGRCVFSSEID-LAAQKTYTANFGDTPYGDITLEST 96
Query: 62 QD--IPDHDVLLAGFPCQPFSQAG 83
+D + D+L GFPCQ FS AG
Sbjct: 97 KDAIPDNFDILCGGFPCQAFSIAG 120
>gi|325270473|ref|ZP_08137075.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM
16608]
gi|324987196|gb|EGC19177.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM
16608]
Length = 365
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
K+ LFCG GG L + F + E ++ + + ++V TY NF + +
Sbjct: 6 YKVASLFCGCGGSDLGIVGGFEYLGKRYDELPFEIAYAVDFDKWAVDTYNKNFRHKAVCA 65
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
D+ ++ + D DVL+ GFPCQ FS
Sbjct: 66 DVTEVDFDETADVDVLIGGFPCQSFST 92
>gi|315650298|ref|ZP_07903370.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315487409|gb|EFU77719.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 644
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF G GG L ++SEI P+ + FP L GDI K+
Sbjct: 16 MKLGALFSGSGGFEL----AGQLVGFTPVWASEIEPFPILVTTKRFPRMLHLGDIKKLDG 71
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+P D++ G PCQ S AG
Sbjct: 72 AKMPKVDIITGGSPCQDMSIAG 93
>gi|290508755|ref|ZP_06548126.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. 1_1_55]
gi|289778149|gb|EFD86146.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. 1_1_55]
Length = 477
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 44/102 (43%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ + + DI
Sbjct: 92 FRFVDLFAGIGGIRNGFE----AIGGQCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 147
Query: 58 KIKTQDIP----------------DHDVLLAGFPCQPFSQAG 83
+ P HDVLLAGFPCQPFS AG
Sbjct: 148 DVTLSHRPDVSDEEAAQHIRETIPQHDVLLAGFPCQPFSLAG 189
>gi|288934555|ref|YP_003438614.1| DNA-cytosine methyltransferase [Klebsiella variicola At-22]
gi|288889264|gb|ADC57582.1| DNA-cytosine methyltransferase [Klebsiella variicola At-22]
Length = 466
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 44/102 (43%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ + + DI
Sbjct: 81 FRFVDLFAGIGGIRNGFE----AIGGQCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 136
Query: 58 KIKTQDIP----------------DHDVLLAGFPCQPFSQAG 83
+ P HDVLLAGFPCQPFS AG
Sbjct: 137 DVTLSHRPDVSDEEAAQHIRETIPQHDVLLAGFPCQPFSLAG 178
>gi|206577074|ref|YP_002237693.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae 342]
gi|206566132|gb|ACI07908.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae 342]
Length = 477
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 44/102 (43%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ + + DI
Sbjct: 92 FRFVDLFAGIGGIRNGFE----AIGGQCVFTSEWNKHAVRTYKANWYCDPQQHRFNEDIR 147
Query: 58 KIKTQDIP----------------DHDVLLAGFPCQPFSQAG 83
+ P HDVLLAGFPCQPFS AG
Sbjct: 148 DVTLSHRPDVSDEEAAQHIRETIPQHDVLLAGFPCQPFSLAG 189
>gi|307153788|ref|YP_003889172.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306984016|gb|ADN15897.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 424
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--------- 55
DLF G GG+ L EQ + S EI+P T++ NFP + +
Sbjct: 12 VDLFAGAGGMSLGFEQA----GFDVLASVEIDPIHCATHEYNFPFSTMICRSVTEITARE 67
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + D DV+ G PCQ FS G
Sbjct: 68 IRNLSPIGTQDIDVVFGGPPCQGFSLIG 95
>gi|67924690|ref|ZP_00518097.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH
8501]
gi|67853467|gb|EAM48819.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH
8501]
Length = 420
Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAK 58
M+ DLF GIGG+RL LE N+E C SSEI+ + A + + GDI
Sbjct: 1 MINFIDLFAGIGGMRLGLELACKKLNIETRCILSSEIDYKAC-ETYALNFDEIPQGDIKN 59
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
I + +LAG PCQPFS AG
Sbjct: 60 IDKIS--SFNFILAGSPCQPFSYAG 82
>gi|325860528|ref|ZP_08173633.1| modification methylase HaeIII [Prevotella denticola CRIS 18C-A]
gi|325481968|gb|EGC84996.1| modification methylase HaeIII [Prevotella denticola CRIS 18C-A]
Length = 403
Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQ------ANFP 48
+KI LF G GG+ L F+ E F+++ + + Y N
Sbjct: 5 IKIASLFSGCGGLDLGFIGGFDFMGKSYPKLPTEIVFANDFDTDAATCYNSNSLLTKNNH 64
Query: 49 NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ DI + ++IPD+D+LLAGFPCQPFS AG
Sbjct: 65 AKCLLRDIRSVNVEEIPDYDILLAGFPCQPFSNAG 99
>gi|291514217|emb|CBK63427.1| DNA-methyltransferase (dcm) [Alistipes shahii WAL 8301]
Length = 296
Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + +LF GIGG L L Q + + SEI+ ++V ++ NFP+ G + I
Sbjct: 1 MNLLELFSGIGGFSLGLRQAG--FTFDKVYFSEIDRHAVANFKHNFPHAQHVGSVCDITG 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
I D++ G PCQ FS AG
Sbjct: 59 TSIERPDIITFGSPCQNFSAAG 80
>gi|291283137|ref|YP_003499955.1| DNA-cytosine methyltransferase [Escherichia coli O55:H7 str.
CB9615]
gi|209766674|gb|ACI81649.1| DNA cytosine methylase [Escherichia coli]
gi|290763010|gb|ADD56971.1| DNA-cytosine methyltransferase [Escherichia coli O55:H7 str.
CB9615]
Length = 472
Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF G+GGIR E +C F+SE N ++V+TY+AN DI
Sbjct: 87 FRFIDLFAGVGGIRRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 142
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|163755904|ref|ZP_02163021.1| modification methylase (Eco47II, Sau96I) [Kordia algicida OT-1]
gi|161324075|gb|EDP95407.1| modification methylase (Eco47II, Sau96I) [Kordia algicida OT-1]
Length = 413
Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
++ +LF G GG+ + LE+ ++C +EI+ ++ +T + ++ G+I
Sbjct: 75 YRVLELFAGAGGLAIGLEKA----GIKCVALNEIDKWACQTLRENRPDWNVLEGNIKSFD 130
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
D +++ GFPCQ FS AG
Sbjct: 131 FSKYKDKVEIVTGGFPCQAFSYAG 154
>gi|300931174|ref|ZP_07146520.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 187-1]
gi|300461007|gb|EFK24500.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 187-1]
Length = 477
Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 49/102 (48%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGI E +C F+SE N ++V+TY+AN DI
Sbjct: 92 FRFIDLFAGIGGICRGFE----SIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIR 147
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP+HDVLLAGFPCQPFS AG
Sbjct: 148 DITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 189
>gi|67458530|ref|YP_246154.1| site-specific DNA methylase [Rickettsia felis URRWXCal2]
gi|67004063|gb|AAY60989.1| Site-specific DNA methylase [Rickettsia felis URRWXCal2]
Length = 105
Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K DLFCGIGG R LE + +EC FSS+I+ + Y+ NF + DI +I
Sbjct: 1 MYKFIDLFCGIGGFRKALE----AKGLECVFSSDIDKDVQEAYKRNFGDKPYG-DITEIS 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
IP HD+L AGFPCQ FS +G
Sbjct: 56 ENKIPKHDILCAGFPCQSFSISG 78
>gi|127459|sp|P15446|MTH2_HAEPA RecName: Full=Modification methylase HpaII; Short=M.HpaII; AltName:
Full=Cytosine-specific methyltransferase HpaII
gi|43630|emb|CAA35705.1| unnamed protein product [Haemophilus parainfluenzae]
gi|305377|gb|AAA20481.1| HpaII modification methyltransferase [Haemophilus parainfluenzae]
Length = 358
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60
DLF GIGG R+ ++ + +C FSSE + + KTY+ANF + + + K
Sbjct: 32 FTFIDLFAGIGGFRIAMQ----NLGGKCIFSSEWDEQAQKTYEANFGDLPYGDITLEETK 87
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+L AGFPCQ FS AG
Sbjct: 88 AFIPEKFDILCAGFPCQAFSIAG 110
>gi|256819660|ref|YP_003140939.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271]
gi|256581243|gb|ACU92378.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271]
Length = 318
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIKT 61
K DLF G+GG R L+ + EC FSSE + ++ +TY+ + + K
Sbjct: 6 KFIDLFAGVGGFRYALQ----NIGAECVFSSEWDKFAQQTYKLNYGEVPFGDITLQETKD 61
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ D+L AGFPCQ FS AG
Sbjct: 62 NIPNEFDILCAGFPCQAFSIAG 83
>gi|161502886|ref|YP_001569998.1| DNA cytosine methylase [Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|160864233|gb|ABX20856.1| hypothetical protein SARI_00944 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 476
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+TY+AN+ DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLEHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVGDDEAAEHIRQYIPQHDVLLAGFPCQPFSLAG 188
>gi|319757808|gb|ADV69750.1| hypothetical protein SSUJS14_0659 [Streptococcus suis JS14]
Length = 424
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
L D F G+GG R LE +C E + ++ K+Y + DI I
Sbjct: 3 LSFLDFFAGVGGFRRGLELA----GFKCIGYCEKDKFARKSYEAMYDTKGEWFHDDITSI 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+P D+ AG PCQ S AG
Sbjct: 59 DPTQLPKADLWTAGSPCQNVSIAG 82
>gi|326798326|ref|YP_004316145.1| DNA-cytosine methyltransferase [Sphingobacterium sp. 21]
gi|326549090|gb|ADZ77475.1| DNA-cytosine methyltransferase [Sphingobacterium sp. 21]
Length = 409
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
DLF GIGG RL + +C F+SE N + K
Sbjct: 85 FTFIDLFAGIGGFRL----ACQNLGGKCVFTSEWNESAKRTYEANFAEVPFGDITKESTK 140
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DVL AGFPCQ FS AG
Sbjct: 141 AFIPKQFDVLCAGFPCQAFSIAG 163
>gi|302866239|ref|YP_003834876.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC
27029]
gi|302569098|gb|ADL45300.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC
27029]
Length = 368
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60
L + DLF G GG+ + + S E + + TY ANF + DI KIK
Sbjct: 8 LSMIDLFAGCGGMTVGFH----NEGFRPILSVEWDRAAASTYAANFGKEHTRWEDIEKIK 63
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+IPD DV++ G PCQ FS G
Sbjct: 64 DDEIPDADVIIGGPPCQGFSNLG 86
>gi|218439646|ref|YP_002377975.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
gi|218172374|gb|ACK71107.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
Length = 320
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAK 58
++K DLFCGIGG RL + Q N + C FSS+I+ + Y+ NF + DI K
Sbjct: 12 VIKYVDLFCGIGGFRLAVNQVSEGYNFKSICVFSSDIDGDAQTVYRENFGDLPEG-DITK 70
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
I + IP H +LLAGFPCQPFS G
Sbjct: 71 IPAEMIPHHHLLLAGFPCQPFSICG 95
>gi|262381005|ref|ZP_06074143.1| site-specific DNA-methyltransferase [Bacteroides sp. 2_1_33B]
gi|262296182|gb|EEY84112.1| site-specific DNA-methyltransferase [Bacteroides sp. 2_1_33B]
Length = 306
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-K 60
+ LF G+GG L E E F EIN + K + +FP ++ + DI +
Sbjct: 1 MTHGSLFSGVGGFDLAAEW----MGWENLFHCEINEWCQKVLRFHFPKSIQYDDITRTDF 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
T DVL GFPCQPFS AG
Sbjct: 57 TPWRGKVDVLTGGFPCQPFSVAG 79
>gi|240145320|ref|ZP_04743921.1| DNA (cytosine-5-)-methyltransferase [Roseburia intestinalis
L1-82]
gi|257202585|gb|EEV00870.1| DNA (cytosine-5-)-methyltransferase [Roseburia intestinalis
L1-82]
Length = 504
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ LF GIGG L + ++SEI + + FP GDI K+ +
Sbjct: 4 KLGSLFDGIGGFPL----AAKRNGIRPVWASEIEKFPMAVTMHRFPEMKHMGDITKLHGE 59
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
++P DV+ G PCQ S AG
Sbjct: 60 NLPVVDVIAGGSPCQDLSIAG 80
>gi|228957327|ref|ZP_04119088.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228802360|gb|EEM49216.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 427
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+K+ +LF G+GG RL LE + N E + ++ P + + N T +
Sbjct: 1 MVKVVELFAGVGGFRLGLE---ANENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57
Query: 61 ------TQDIPDHDVLLAGFPCQPFSQA 82
+IP+HD+L+ GFPCQ +S A
Sbjct: 58 RDIAEAWPEIPEHDLLVGGFPCQDYSVA 85
>gi|229078249|ref|ZP_04210814.1| Modification methylase Sau3AI [Bacillus cereus Rock4-2]
gi|228705049|gb|EEL57470.1| Modification methylase Sau3AI [Bacillus cereus Rock4-2]
Length = 427
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+K+ +LF G+GG RL LE + N E + ++ P + + N T +
Sbjct: 1 MVKVVELFAGVGGFRLGLE---ANENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57
Query: 61 ------TQDIPDHDVLLAGFPCQPFSQA 82
+IP+HD+L+ GFPCQ +S A
Sbjct: 58 RDIAEAWPEIPEHDLLVGGFPCQDYSVA 85
>gi|229101666|ref|ZP_04232385.1| Modification methylase Sau3AI [Bacillus cereus Rock3-28]
gi|228681735|gb|EEL35893.1| Modification methylase Sau3AI [Bacillus cereus Rock3-28]
Length = 427
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+K+ +LF G+GG RL LE + N E + ++ P + + N T +
Sbjct: 1 MVKVVELFAGVGGFRLGLE---ANENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57
Query: 61 ------TQDIPDHDVLLAGFPCQPFSQA 82
+IP+HD+L+ GFPCQ +S A
Sbjct: 58 RDIAEAWPEIPEHDLLVGGFPCQDYSVA 85
>gi|229108527|ref|ZP_04238142.1| Modification methylase Sau3AI [Bacillus cereus Rock1-15]
gi|228674934|gb|EEL30163.1| Modification methylase Sau3AI [Bacillus cereus Rock1-15]
Length = 427
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+K+ +LF G+GG RL LE + N E + ++ P + + N T +
Sbjct: 1 MVKVVELFAGVGGFRLGLE---ANENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57
Query: 61 ------TQDIPDHDVLLAGFPCQPFSQA 82
+IP+HD+L+ GFPCQ +S A
Sbjct: 58 RDIAEAWPEIPEHDLLVGGFPCQDYSVA 85
>gi|229171704|ref|ZP_04299279.1| Modification methylase Sau3AI [Bacillus cereus MM3]
gi|228611850|gb|EEK69097.1| Modification methylase Sau3AI [Bacillus cereus MM3]
Length = 430
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+K+ +LF G+GG RL LE + N E + ++ P + + N T +
Sbjct: 1 MVKVVELFAGVGGFRLGLE---ANENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57
Query: 61 ------TQDIPDHDVLLAGFPCQPFSQA 82
+IP+HD+L+ GFPCQ +S A
Sbjct: 58 RDIAEAWPEIPEHDLLVGGFPCQDYSVA 85
>gi|157265308|ref|YP_001467867.1| C5 cytosine-specific DNA methylase [Thermus phage P23-45]
gi|157265426|ref|YP_001467984.1| C5 cytosine-specific DNA methylase [Thermus phage P74-26]
gi|156905203|gb|ABU96847.1| C5 cytosine-specific DNA methylase [Thermus phage P23-45]
gi|156905321|gb|ABU96964.1| C5 cytosine-specific DNA methylase [Thermus phage P74-26]
Length = 368
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTF-------NHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55
+ LF G GG+ L F + + + N +V TY AN D
Sbjct: 9 TVLSLFSGAGGMDLGFTGGFTFLGKTYPRTGFKVVKAYDNNRRAVDTYNANLDPVAELKD 68
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++ +IP DV++ GFPCQ FS AG
Sbjct: 69 VTTLQDHEIPSVDVVIGGFPCQDFSLAG 96
>gi|291521423|emb|CBK79716.1| DNA-methyltransferase (dcm) [Coprococcus catus GD/7]
Length = 521
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
MLK DLF G GG+ E T ++E N + KTY N I ++
Sbjct: 1 MLKTIDLFAGAGGLSYGFESTGE---FLIVAAAENNKNARKTYIENHKGRNDIRLIPDVR 57
Query: 61 TQD-------IPDHDVLLAGFPCQPFSQA 82
D DV++ G PCQ FS A
Sbjct: 58 DYDFSALASEFDGIDVVIGGPPCQGFSNA 86
>gi|284928852|ref|YP_003421374.1| DNA-methyltransferase Dcm [cyanobacterium UCYN-A]
gi|284809311|gb|ADB95016.1| DNA-methyltransferase Dcm [cyanobacterium UCYN-A]
Length = 422
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---------D 55
DLF G+GG+ L EQ + S EI+P + NFP
Sbjct: 9 IDLFAGVGGMTLGFEQA----GFDVLGSVEIDPIHCAAHHYNFPFWTTICSDISIINAKT 64
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + DV+ G PCQ FS G
Sbjct: 65 IRNLSCIGNREIDVVFGGPPCQGFSLIG 92
>gi|238923038|ref|YP_002936551.1| DcmB [Eubacterium rectale ATCC 33656]
gi|238874710|gb|ACR74417.1| DcmB [Eubacterium rectale ATCC 33656]
Length = 672
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+ I LF G GG+ L E ++E + T++AN PNT I GDI ++
Sbjct: 1 MNIISLFSGCGGLDLGFESA----GFNIPVANEFDKTIWATFKANHPNTHLIEGDIRQVT 56
Query: 61 TQD-----IPDHDVLLAGFPCQPFSQAG 83
+D + D ++ G PCQ +S+AG
Sbjct: 57 KEDIEQYIDGEIDGIIGGPPCQSWSEAG 84
>gi|218245850|ref|YP_002371221.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|257058898|ref|YP_003136786.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|218166328|gb|ACK65065.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|256589064|gb|ACU99950.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 418
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--------- 55
DLF G GG+ L EQ + S EI+P + NFP I
Sbjct: 9 VDLFAGAGGMTLGFEQA----GFDVLASVEIDPIHCLVHHYNFPFWSIICRDIQTITGQE 64
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I ++ DV+ G PCQ FS G
Sbjct: 65 IRQLSKVGNHPIDVVFGGPPCQGFSLMG 92
>gi|313668796|ref|YP_004049080.1| C-5 cytosine-specific DNA-methylase [Neisseria lactamica ST-640]
gi|313006258|emb|CBN87720.1| C-5 cytosine-specific DNA-methylase [Neisseria lactamica 020-06]
Length = 362
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
DLF GIGG R+ ++ + EC FSSE + + + + K
Sbjct: 36 FTFIDLFAGIGGFRIAMQ----NLGGECVFSSEWDEKAKQTYEANFGEVPFGDITLEETK 91
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DVL AGFPCQ FS AG
Sbjct: 92 QCIPEQFDVLCAGFPCQAFSIAG 114
>gi|213053466|ref|ZP_03346344.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
Length = 320
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|309378773|emb|CBX22599.1| putative DNA cytosine methyltransferase [Neisseria lactamica
Y92-1009]
Length = 342
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
DLF GIGG R+ ++ + EC FSSE + + + + K
Sbjct: 16 FTFIDLFAGIGGFRIAMQ----NLGGECVFSSEWDEKAKQTYEANFGEVPFGDITLEETK 71
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DVL AGFPCQ FS AG
Sbjct: 72 QCIPEQFDVLCAGFPCQAFSIAG 94
>gi|304390602|ref|ZP_07372555.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326358|gb|EFL93603.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 321
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI---AK 58
+++ DLF G GG+ L EQ + + + +V Y+ NF + + D+
Sbjct: 25 MRVIDLFSGCGGMSLGFEQG----GYQVVAAFDNWQPAVDIYKENFQHPIHNIDLATDEA 80
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
++ + DV++ G PCQ +S AG
Sbjct: 81 LEIIEQAKPDVIIGGPPCQDYSIAG 105
>gi|229095557|ref|ZP_04226542.1| Modification methylase Sau3AI [Bacillus cereus Rock3-29]
gi|228687859|gb|EEL41752.1| Modification methylase Sau3AI [Bacillus cereus Rock3-29]
Length = 427
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+K+ +LF G+GG RL LE ++N E + ++ P + + N T +
Sbjct: 1 MVKVVELFAGVGGFRLGLE---ANKNFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57
Query: 61 ------TQDIPDHDVLLAGFPCQPFSQA 82
++P+HD+L+ GFPCQ +S A
Sbjct: 58 RDIAEAWPEVPEHDLLVGGFPCQDYSVA 85
>gi|228913600|ref|ZP_04077228.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228846011|gb|EEM91034.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 427
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+K+ +LF G+GG RL LE + N E + ++ P + + N T +
Sbjct: 1 MVKVVELFAGVGGFRLGLE---ANENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57
Query: 61 ------TQDIPDHDVLLAGFPCQPFSQA 82
++P+HD+L+ GFPCQ +S A
Sbjct: 58 RDIAEAWPEVPEHDLLVGGFPCQDYSVA 85
>gi|228944657|ref|ZP_04107027.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228815117|gb|EEM61368.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 427
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+K+ +LF G+GG RL LE + N E + ++ P + + N T +
Sbjct: 1 MVKVVELFAGVGGFRLGLE---ANENFEVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57
Query: 61 ------TQDIPDHDVLLAGFPCQPFSQA 82
++P+HD+L+ GFPCQ +S A
Sbjct: 58 RDIAEAWPEVPEHDLLVGGFPCQDYSVA 85
>gi|109947738|ref|YP_664966.1| site-specific DNA methyltransferase [Helicobacter acinonychis
str. Sheeba]
gi|109714959|emb|CAJ99967.1| site-specific DNA methyltransferase [Helicobacter acinonychis
str. Sheeba]
Length = 327
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+ + LF G GG+ L EQ + ++E + TY+ N NT + DI ++
Sbjct: 1 MNLLSLFAGAGGLDLGFEQA----GFKIVIANEYDKNITPTYRLNHKNTQLLEKDIKNLQ 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
T +I D ++ G PCQ +S+AG
Sbjct: 57 TNEINFSVDGIIGGPPCQSWSEAG 80
>gi|239918514|ref|YP_002958072.1| DNA-methyltransferase Dcm [Micrococcus luteus NCTC 2665]
gi|281415284|ref|ZP_06247026.1| DNA-methyltransferase Dcm [Micrococcus luteus NCTC 2665]
gi|239839721|gb|ACS31518.1| DNA-methyltransferase Dcm [Micrococcus luteus NCTC 2665]
Length = 315
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ F GIGG L E + + EI + + + ++P +I +
Sbjct: 13 LRMASFFTGIGGFDLGFENA----GIRTVYQCEIKDFCNQVLEYHWPEIPRGTNIELVNP 68
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
DIP+ D+ GFPCQ S A
Sbjct: 69 DDIPEADIWTGGFPCQDISLA 89
>gi|89097277|ref|ZP_01170167.1| hypothetical protein B14911_16900 [Bacillus sp. NRRL B-14911]
gi|89088100|gb|EAR67211.1| hypothetical protein B14911_16900 [Bacillus sp. NRRL B-14911]
Length = 416
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
L + +LF G+GG R+ LE+ + + ++++ P N N+ +
Sbjct: 5 LNVVELFAGVGGFRVGLERADKNF-FDTVWANQWEPSKKAQDAFNCYNSHFPSSVNCNDD 63
Query: 61 -------TQDIPDHDVLLAGFPCQPFSQA 82
T + + D+L+ GFPCQ +S A
Sbjct: 64 IGKVSNKTFEDMNIDLLVGGFPCQDYSVA 92
>gi|253569226|ref|ZP_04846636.1| cytosine-specific DNA methylase [Bacteroides sp. 1_1_6]
gi|251841245|gb|EES69326.1| cytosine-specific DNA methylase [Bacteroides sp. 1_1_6]
Length = 448
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF G+GG L LE +C F+SE+ + Y N
Sbjct: 4 YRFIDLFAGLGGFHLALE----KLGCKCVFASELQQELQELYYLNHGIKCHGDINQVNIK 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIP HD+L AGFPCQPFS+AG
Sbjct: 60 NDIPSHDILCAGFPCQPFSKAG 81
>gi|261400408|ref|ZP_05986533.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970]
gi|269209852|gb|EEZ76307.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970]
Length = 362
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
DLF GIGG R+ ++ + EC FSSE + + + + K
Sbjct: 36 FTFIDLFAGIGGFRIAMQ----NLGGECVFSSEWDEKAKQTYEANFGEVPFGDITLEETK 91
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DVL AGFPCQ FS AG
Sbjct: 92 QCIPEQFDVLCAGFPCQAFSIAG 114
>gi|166367718|ref|YP_001659991.1| modification methylase [Microcystis aeruginosa NIES-843]
gi|166090091|dbj|BAG04799.1| modification methylase [Microcystis aeruginosa NIES-843]
Length = 159
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
++ DLFCG+GG R+ +E+ +N+E C FS +I+ + Y ANF + DI +I
Sbjct: 10 IRFIDLFCGLGGFRVAIERVCRQKNLESDCVFSCDIDKDARAIYHANFGDQPQG-DITEI 68
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
DIP+HD+L+AGFPCQPFS G
Sbjct: 69 AALDIPNHDILMAGFPCQPFSICG 92
>gi|157311261|ref|YP_001469305.1| gp72 [Mycobacterium phage Tweety]
gi|148540890|gb|ABQ86141.1| gp72 [Mycobacterium phage Tweety]
Length = 370
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++I LF G GG+ L +E+ F + EI+P + K +P+ FG + I
Sbjct: 1 MRIGSLFSGAGGLDLAVEEVF---GGRTVWHCEIDPAASKVLAHRWPSVPNFGSVTDIDW 57
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ DVL GFPCQ S AG
Sbjct: 58 STVEPVDVLCGGFPCQDLSCAG 79
>gi|291525029|emb|CBK90616.1| DNA-methyltransferase (dcm) [Eubacterium rectale DSM 17629]
Length = 337
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK+ D FCG GG+ + + E + + + Y+V++Y+AN + + DI ++
Sbjct: 5 LKVNDFFCGCGGMGIAFKNA----GYEIAGAWDFDKYAVESYRANVGDHVQKADIKELHQ 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIP DV GFPCQ S AG
Sbjct: 61 ADIPQADVWAFGFPCQDLSVAG 82
>gi|266620546|ref|ZP_06113481.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM
13479]
gi|288867840|gb|EFD00139.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM
13479]
Length = 521
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
MLK DLF G GG+ E T ++E N + KTY N I ++
Sbjct: 1 MLKTIDLFAGAGGLSYGFESTGE---FLIVAAAENNKNARKTYIENHKGRNDIRMIPDVR 57
Query: 61 TQD-------IPDHDVLLAGFPCQPFSQA 82
D DV++ G PCQ FS A
Sbjct: 58 GYDFSALASEFDGIDVVIGGPPCQGFSNA 86
>gi|77918034|ref|YP_355849.1| C-5 cytosine-specific DNA methylase [Pelobacter carbinolicus DSM
2380]
gi|77544117|gb|ABA87679.1| C-5 cytosine-specific DNA methylase [Pelobacter carbinolicus DSM
2380]
Length = 405
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-------- 52
MLK L+ G GG+ L LE E + EI+ ++ +T N PN
Sbjct: 1 MLKTISLYTGAGGLDLGLEAA----GFETTVAVEIDKWACQTLCHNRPNWNPIEEDIHNV 56
Query: 53 -FGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+++I + + +L+ G PCQPFS+A
Sbjct: 57 SCATLSEIGGFNSGEASLLIGGPPCQPFSKA 87
>gi|325499566|gb|EGC97425.1| DNA cytosine methylase [Escherichia fergusonii ECD227]
Length = 473
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----AIGGQCVFTSEWNKEAVRTYKANWYNDESSHTFNHDIR 151
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
++ + IPDHDVLLAGFPCQPFS AG
Sbjct: 152 EVTLSADDTVSEKQAYAHIQRHIPDHDVLLAGFPCQPFSLAG 193
>gi|324112381|gb|EGC06359.1| DNA-cytosine methyltransferase [Escherichia fergusonii B253]
Length = 473
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----AIGGQCVFTSEWNKEAVRTYKANWYNDESSHTFNHDIR 151
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
++ + IPDHDVLLAGFPCQPFS AG
Sbjct: 152 EVTLSADDTVSEKQAYAHIQRHIPDHDVLLAGFPCQPFSLAG 193
>gi|218551294|ref|YP_002385086.1| DNA cytosine methylase [Escherichia fergusonii ATCC 35469]
gi|218358836|emb|CAQ91493.1| DNA modification methylase [Escherichia fergusonii ATCC 35469]
Length = 485
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 108 FRFIDLFAGIGGIRKGFE----AIGGQCVFTSEWNKEAVRTYKANWYNDESSHTFNHDIR 163
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
++ + IPDHDVLLAGFPCQPFS AG
Sbjct: 164 EVTLSADDTVSEKQAYAHIQRHIPDHDVLLAGFPCQPFSLAG 205
>gi|225017397|ref|ZP_03706589.1| hypothetical protein CLOSTMETH_01323 [Clostridium methylpentosum
DSM 5476]
gi|224949807|gb|EEG31016.1| hypothetical protein CLOSTMETH_01323 [Clostridium methylpentosum
DSM 5476]
Length = 485
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY---QANFPNTLIFGDIAK 58
+ D F GIGG R E + C EI+ Y+ ++Y + DI K
Sbjct: 4 MTFLDFFAGIGGFRKGFE----LCGMRCVGHCEIDKYADRSYRAIHDVKEDEWYAADITK 59
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D+P D+ GFPCQ S AG
Sbjct: 60 VAPADLPRADLWAGGFPCQDISVAG 84
>gi|134097718|ref|YP_001103379.1| C-5 cytosine-specific DNA methylase [Saccharopolyspora erythraea
NRRL 2338]
gi|291006322|ref|ZP_06564295.1| C-5 cytosine-specific DNA methylase [Saccharopolyspora erythraea
NRRL 2338]
gi|133910341|emb|CAM00454.1| C-5 cytosine-specific DNA methylase [Saccharopolyspora erythraea
NRRL 2338]
Length = 248
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
L + LF GIGG+ L LE+ + E++P+ + ++P D+
Sbjct: 4 LTVLSLFAGIGGLELGLERA----GMRVVGQVELDPWCRQVLAHHWPEVPRHDDVRTAVD 59
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
+Q PD +++ GFPCQPFS G
Sbjct: 60 WWHSQPRPDVELVAGGFPCQPFSTYG 85
>gi|317504402|ref|ZP_07962385.1| modification methylase Sau3AI [Prevotella salivae DSM 15606]
gi|315664482|gb|EFV04166.1| modification methylase Sau3AI [Prevotella salivae DSM 15606]
Length = 579
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK------TYQANFPNTLIFGD 55
+K+ +LF G+GG R+ LE + E ++++ P ++ D
Sbjct: 9 IKVVELFAGVGGFRIGLEGASDD--YETIWNNQWEPSTIHQDASLVYRARFGSKGHCNED 66
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
I + T +IP+HD+L+ GFPCQ +S A
Sbjct: 67 INNVDTANIPNHDLLVGGFPCQDYSVA 93
>gi|327254549|gb|EGE66165.1| modification methylase EcoRII [Escherichia coli STEC_7v]
Length = 474
Score = 80.4 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E + +C F+SE N +V+TY+AN+ N DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----NIGGQCVFTSEWNKEAVRTYKANWFNDELNHKFNLDIR 151
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
++ D PDHDVLLAGFPCQPFS AG
Sbjct: 152 EVTLSDRDDVSEVEAYNHIDKNIPDHDVLLAGFPCQPFSLAG 193
>gi|331671799|ref|ZP_08372595.1| modification methylase EcoRII (Cytosine-specificmethyltransferase
EcoRII) (M.EcoRII) [Escherichia coli TA280]
gi|331070788|gb|EGI42147.1| modification methylase EcoRII (Cytosine-specificmethyltransferase
EcoRII) (M.EcoRII) [Escherichia coli TA280]
Length = 474
Score = 80.4 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E + +C F+SE N +V+TY+AN+ N DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----NIGGQCVFTSEWNKEAVRTYKANWFNDELNHKFNLDIR 151
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
++ D PDHDVLLAGFPCQPFS AG
Sbjct: 152 EVTLSDRDDVSEMEAYNHIDKNIPDHDVLLAGFPCQPFSLAG 193
>gi|188533556|ref|YP_001907353.1| DNA cytosine methylase [Erwinia tasmaniensis Et1/99]
gi|188028598|emb|CAO96460.1| DNA-cytosine methyltransferase [Erwinia tasmaniensis Et1/99]
Length = 469
Score = 80.4 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +SV+ + + DI
Sbjct: 95 FRFIDLFAGIGGIRSGFE----AIGGQCVFTSEWNKHSVRTYKANWYCDETQHRFNQDIR 150
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q IPDHDVLLAGFPCQPFS AG
Sbjct: 151 DVTLSGDPQVDDREAYQHIQQQIPDHDVLLAGFPCQPFSLAG 192
>gi|317013900|gb|ADU81336.1| type II DNA modification (methyltransferase) [Helicobacter pylori
Gambia94/24]
Length = 351
Score = 80.4 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H + E ++++I+ ++ +YQAN T DIA++
Sbjct: 1 MYKVADIFCGAGGLSYGFS---VHPHFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 HYHNLPCVPIDILLGGPPCQSYSTLG 83
>gi|225375653|ref|ZP_03752874.1| hypothetical protein ROSEINA2194_01278 [Roseburia inulinivorans
DSM 16841]
gi|225212510|gb|EEG94864.1| hypothetical protein ROSEINA2194_01278 [Roseburia inulinivorans
DSM 16841]
Length = 473
Score = 80.4 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ LF GIGG L + ++SEI + + FP GDI K+ +
Sbjct: 4 KLGSLFDGIGGFPL----AAKRNGIRPVWASEIEKFPMAVTMYRFPEMKHMGDITKLHGE 59
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
++P DV+ G PCQ S AG
Sbjct: 60 NLPVVDVIAGGSPCQDLSIAG 80
>gi|329123496|ref|ZP_08252060.1| modification methylase HaeIII [Haemophilus aegyptius ATCC 11116]
gi|327471078|gb|EGF16533.1| modification methylase HaeIII [Haemophilus aegyptius ATCC 11116]
Length = 133
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF G GG+ L ++ ++E + KTY++N LI GDI+KI +
Sbjct: 21 MNLISLFSGAGGLDLGFQKA----GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISS 76
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ P D ++ G PCQ +S+ G
Sbjct: 77 DEFPKCDGIIGGPPCQSWSEGG 98
>gi|239625877|ref|ZP_04668908.1| methyltransferase [Clostridiales bacterium 1_7_47_FAA]
gi|239520107|gb|EEQ59973.1| methyltransferase [Clostridiales bacterium 1_7_47FAA]
Length = 338
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK+ D FCG GG+ + + E + + + Y+V++Y+AN + + DI ++
Sbjct: 5 LKVNDFFCGCGGMGIAFKNA----GYEIAGAWDFDKYAVESYRANVGDHVQKADIKELHQ 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIP DV GFPCQ S AG
Sbjct: 61 ADIPQADVWAFGFPCQDLSVAG 82
>gi|209527695|ref|ZP_03276192.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209491867|gb|EDZ92225.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 314
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
++ DLF G GG+ L E + + EI ++K YQ NF + + D+++
Sbjct: 1 MRTIDLFAGCGGLSLGFENA----GFDIKAAFEIWQPAIKVYQRNFRHPIFQVDLSEESV 56
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
I T +V++ G PCQ FS AG
Sbjct: 57 IHTLREYKPEVIIGGPPCQDFSSAG 81
>gi|331643338|ref|ZP_08344469.1| modification methylase EcoRII (Cytosine-specificmethyltransferase
EcoRII) (M.EcoRII) [Escherichia coli H736]
gi|331036809|gb|EGI09033.1| modification methylase EcoRII (Cytosine-specificmethyltransferase
EcoRII) (M.EcoRII) [Escherichia coli H736]
Length = 491
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 110 FRFIDLFAGIGGIRKGFE----AIGGQCVFTSEWNKDAVRTYKANWFNDEQVHKFNLDIR 165
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
++ D PDHDVLLAGFPCQPFS AG
Sbjct: 166 EVTLSDKTDVLETDAYAYIDEHVPDHDVLLAGFPCQPFSLAG 207
>gi|323960520|gb|EGB56149.1| DNA-cytosine methyltransferase [Escherichia coli H489]
Length = 477
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----AIGGQCVFTSEWNKDAVRTYKANWFNDEQVHKFNLDIR 151
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
++ D PDHDVLLAGFPCQPFS AG
Sbjct: 152 EVTLSDKTDVLETDAYAYIDEHVPDHDVLLAGFPCQPFSLAG 193
>gi|307139342|ref|ZP_07498698.1| DNA cytosine methylase [Escherichia coli H736]
Length = 477
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----AIGGQCVFTSEWNKDAVRTYKANWFNDEQVHKFNLDIR 151
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
++ D PDHDVLLAGFPCQPFS AG
Sbjct: 152 EVTLSDKTDVLETDAYAYIDEHVPDHDVLLAGFPCQPFSLAG 193
>gi|291537886|emb|CBL10997.1| DNA-methyltransferase (dcm) [Roseburia intestinalis XB6B4]
Length = 473
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ LF GIGG L + ++SEI + + FP GDI K+ +
Sbjct: 4 KLGSLFDGIGGFPL----AAKRNGIRPVWASEIEKFPMAVTMYRFPEMKHMGDITKLHGE 59
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
++P DV+ G PCQ S AG
Sbjct: 60 NLPVVDVIAGGSPCQDLSIAG 80
>gi|218701133|ref|YP_002408762.1| DNA cytosine methylase [Escherichia coli IAI39]
gi|218371119|emb|CAR18947.1| Modification methylase EcoRII (M.EcoRII) (Cytosine-specific
methyltransferase EcoRII) [Escherichia coli IAI39]
Length = 491
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 110 FRFIDLFAGIGGIRKGFE----AIGGQCVFTSEWNKDAVRTYKANWFNDEQVHKFNLDIR 165
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
++ D PDHDVLLAGFPCQPFS AG
Sbjct: 166 EVTLSDKTDVLETDAYAYIDEHVPDHDVLLAGFPCQPFSLAG 207
>gi|172039658|ref|YP_001806159.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC
51142]
gi|171701112|gb|ACB54093.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC
51142]
Length = 321
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
+K+ DLF G GG+ L + + + VK YQ NF + + D++
Sbjct: 3 MKVIDLFAGCGGLSLGFQNA----GYTILAAYDNWEPVVKIYQKNFKHPIYKWDLSRYEL 58
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ + D+++ G PCQ FS AG
Sbjct: 59 YLEEFKSLNPDLIMGGPPCQDFSSAG 84
>gi|56964613|ref|YP_176344.1| site-specific DNA-methyltransferase [Bacillus clausii KSM-K16]
gi|56910856|dbj|BAD65383.1| site-specific DNA-methyltransferase [Bacillus clausii KSM-K16]
Length = 286
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+K +LF GIGGI L E +E E P+ K ++P+ IF DI +
Sbjct: 1 MKSIELFAGIGGIALAAEWA----GIETVAFCEREPFCQKILNKHWPDVPIFDDIKTLDK 56
Query: 60 -----KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D+ +++ GFPCQP+S AG
Sbjct: 57 KALEERGIDVGAIELITGGFPCQPYSVAG 85
>gi|127447|sp|P25266|MTE1_HERAU RecName: Full=Modification methylase HgiEI; Short=M.HgiEI;
AltName: Full=Cytosine-specific methyltransferase HgiEI
gi|43471|emb|CAA38944.1| methyltransferase [Herpetosiphon aurantiacus]
Length = 437
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGG RL LE C S+EI+ ++K Y N+P + ++ I
Sbjct: 4 FRFIDLFAGIGGFRLGLE----AVGGVCVASAEIDQQAIKVYWQNWPTDGVDHNLGDITQ 59
Query: 62 QDI-PDHDVLLAGFPCQPFSQAG 83
P HDVL+ G PCQP+S AG
Sbjct: 60 IQQLPAHDVLVGGVPCQPWSIAG 82
>gi|251811836|ref|ZP_04826309.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875124|ref|ZP_06283997.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
SK135]
gi|251804633|gb|EES57290.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295889|gb|EFA88410.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
SK135]
Length = 329
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIK 60
DLF G GG+ L + + FS E + + + LI DI +I
Sbjct: 3 YNYIDLFSGAGGMSLGF----DLEGFKNVFSVEYDLQTAQTYRYNFPNHVLINKDIQEIS 58
Query: 61 TQDIPDH------DVLLAGFPCQPFSQAG 83
T +I DV++ G PCQ FS AG
Sbjct: 59 TNEIKKIINNNTVDVIIGGPPCQGFSLAG 87
>gi|317180612|dbj|BAJ58398.1| Type II modification enzyme [Helicobacter pylori F32]
Length = 327
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+ + LF G GG+ L E+ + ++E + TY+ N NT + DI ++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKA----GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQ 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
T +I D ++ G PCQ +S+AG
Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80
>gi|308063355|gb|ADO05242.1| site-specific DNA methyltransferase [Helicobacter pylori Sat464]
Length = 327
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+ + LF G GG+ L E+ + ++E + TY+ N NT + DI ++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKA----GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQ 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
T +I D ++ G PCQ +S+AG
Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80
>gi|315586485|gb|ADU40866.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
gi|317178791|dbj|BAJ56579.1| Type II modification enzyme [Helicobacter pylori F30]
Length = 327
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+ + LF G GG+ L E+ + ++E + TY+ N NT + DI ++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKA----GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQ 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
T +I D ++ G PCQ +S+AG
Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80
>gi|217033005|ref|ZP_03438476.1| hypothetical protein HPB128_151g1 [Helicobacter pylori B128]
gi|298736554|ref|YP_003729080.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945262|gb|EEC23940.1| hypothetical protein HPB128_151g1 [Helicobacter pylori B128]
gi|298355744|emb|CBI66616.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 327
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+ + LF G GG+ L E+ + ++E + TY+ N NT + DI ++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKA----GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQ 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
T +I D ++ G PCQ +S+AG
Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80
>gi|217034513|ref|ZP_03439924.1| hypothetical protein HP9810_873g29 [Helicobacter pylori 98-10]
gi|216943054|gb|EEC22533.1| hypothetical protein HP9810_873g29 [Helicobacter pylori 98-10]
Length = 327
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+ + LF G GG+ L E+ + ++E + TY+ N NT + DI ++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKA----GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQ 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
T +I D ++ G PCQ +S+AG
Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80
>gi|160939240|ref|ZP_02086591.1| hypothetical protein CLOBOL_04134 [Clostridium bolteae ATCC
BAA-613]
gi|158438203|gb|EDP15963.1| hypothetical protein CLOBOL_04134 [Clostridium bolteae ATCC
BAA-613]
Length = 366
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIAK 58
+ D F GIG RL LEQ C EI+ Y+ +YQA DI K
Sbjct: 1 MYFLDFFAGIGLFRLGLEQA----GWTCKGHCEIDKYANMSYQAMHHIKEGEWFEEDITK 56
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q +PD D+ GFPCQ S AG
Sbjct: 57 VSAQSLPDVDLWTGGFPCQDVSMAG 81
>gi|163938820|ref|YP_001643704.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis
KBAB4]
gi|163861017|gb|ABY42076.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis
KBAB4]
Length = 350
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
K+ +F GIGG L +Q E +++E++ + TY+ + D+ ++
Sbjct: 5 YKLGSMFAGIGGTCLGFQQA----GAEIVWANEVDRNASITYRHFWKGEYLQEADVTEVD 60
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
I D+L+ GFPCQ FS AG
Sbjct: 61 KTTISQLDILIGGFPCQAFSIAG 83
>gi|171911440|ref|ZP_02926910.1| DNA-cytosine methyltransferase [Verrucomicrobium spinosum DSM
4136]
Length = 292
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
LF GIGG L E+ +C +S EINP + FP++ F D+ +
Sbjct: 14 THGSLFAGIGGFELGFERA----GFQCSWSVEINPINRAVLADRFPHSRQFEDVRECGAH 69
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
++ DVL AGFPCQ S AG
Sbjct: 70 NLSPVDVLTAGFPCQDISAAG 90
>gi|186476891|ref|YP_001858361.1| DNA-cytosine methyltransferase [Burkholderia phymatum STM815]
gi|184193350|gb|ACC71315.1| DNA-cytosine methyltransferase [Burkholderia phymatum STM815]
Length = 428
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--------D 55
DLF GIGGIR+ E +C F+SE N +S KTY+ NF D
Sbjct: 73 FIDLFAGIGGIRMGFE----AHGGQCVFTSEWNVFSQKTYRENFGEHCGDAAPQHTLIGD 128
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + +P+HD+LL GFPCQPFS AG
Sbjct: 129 IVTFPAEAVPEHDILLGGFPCQPFSIAG 156
>gi|67922277|ref|ZP_00515790.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67855853|gb|EAM51099.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 226
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE-------CFFSSEINPYSVKTYQANFPNTLIFG 54
LK DLFCGIGG R+ LE +H + C FSS+I+ + G
Sbjct: 16 LKYIDLFCGIGGFRIALELVCSHYKFKEHKIKPICVFSSDIDADAQ-KNYEANFKDKPQG 74
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI +I + IP+H++LLAGFPCQ FS G
Sbjct: 75 DITQIPVELIPNHNLLLAGFPCQTFSICG 103
>gi|262283530|ref|ZP_06061296.1| cytosine-specific methyltransferase NlaX [Streptococcus sp.
2_1_36FAA]
gi|262261021|gb|EEY79721.1| cytosine-specific methyltransferase NlaX [Streptococcus sp.
2_1_36FAA]
Length = 411
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAKI 59
+K DLF GIGG R +E EC E++ ++ K+Y+A F DI +
Sbjct: 1 MKFLDLFSGIGGFRFGMEAA----GHECIGFCEVDVFARKSYKAIFNTEKEVELHDIRSV 56
Query: 60 KTQDI---PDHDVLLAGFPCQPFSQAG 83
+ I D+L GFPCQ FS AG
Sbjct: 57 PDESIRGLGQVDILCGGFPCQSFSLAG 83
>gi|261839303|gb|ACX99068.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
Length = 348
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T DI ++
Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKKTQTILCDIMQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83
>gi|229131851|ref|ZP_04260720.1| Modification methylase Sau3AI [Bacillus cereus BDRD-ST196]
gi|228651598|gb|EEL07564.1| Modification methylase Sau3AI [Bacillus cereus BDRD-ST196]
Length = 427
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+K+ +LF G+GG RL LE + N + + ++ P + + N T +
Sbjct: 1 MVKVVELFAGVGGFRLGLE---ANENFDVLWGNQWEPSTKAQHAFNCYATRFENKGIHVN 57
Query: 61 ------TQDIPDHDVLLAGFPCQPFSQA 82
Q+IP+HD+L+ GFPCQ +S A
Sbjct: 58 KDIAEAWQEIPEHDLLVGGFPCQDYSVA 85
>gi|300933957|ref|ZP_07149213.1| DNA-cytosine methyltransferase [Corynebacterium resistens DSM
45100]
Length = 363
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ F G GG+ L L+ + ++++ + +V TY+ N ++ GDI +I
Sbjct: 6 KVVSTFAGCGGLDLGLQ----DVGFDIVWANDFSKEAVATYRHNINAHIVDGDITEIDPF 61
Query: 63 DI---PDHDVLLAGFPCQPFSQ 81
PD D++ GFPCQ FS
Sbjct: 62 TDETIPDADLVTGGFPCQDFSM 83
>gi|188527304|ref|YP_001909991.1| site-specific DNA methyltransferase [Helicobacter pylori Shi470]
gi|188143544|gb|ACD47961.1| site-specific DNA methyltransferase [Helicobacter pylori Shi470]
Length = 327
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+ + LF G GG+ L E+ + ++E + TY+ N NT + DI ++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKA----GFKIVVANEYDKNITPTYRLNHKNTRLLEKDIKNLQ 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
T +I D ++ G PCQ +S+AG
Sbjct: 57 TSEINFSVDGIIGGPPCQSWSEAG 80
>gi|291569071|dbj|BAI91343.1| cytosine-specific methyltransferase [Arthrospira platensis
NIES-39]
Length = 429
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/83 (48%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
K DLF GIGG+RL EQ + +C SSEI+ + + YQANF GDI I
Sbjct: 5 KFIDLFAGIGGLRLGFEQAVDSFGCIPDCLLSSEIDRDARQVYQANFS-ETPQGDIKTIS 63
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ +P H +LLAGFPCQ FS AG
Sbjct: 64 S--LPPHHILLAGFPCQSFSYAG 84
>gi|284050345|ref|ZP_06380555.1| DNA (cytosine-5-)-methyltransferase [Arthrospira platensis str.
Paraca]
Length = 429
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/83 (48%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
K DLF GIGG+RL EQ + +C SSEI+ + + YQANF GDI I
Sbjct: 5 KFIDLFAGIGGLRLGFEQAVDSFGCIPDCLLSSEIDRDARQVYQANFS-ETPQGDIKTIS 63
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ +P H +LLAGFPCQ FS AG
Sbjct: 64 S--LPPHHILLAGFPCQSFSYAG 84
>gi|91201234|emb|CAJ74294.1| similar to site-specific DNA-methyltransferase
(cytosine-specific) [Candidatus Kuenenia
stuttgartiensis]
Length = 313
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
+ + LF G GG+ L F+ E +++E++ + +TY+ N ++ G
Sbjct: 8 ITVVSLFAGCGGMDLGFSGGFDFLGVHYARTQFEIIWANELSGAACRTYRKNIGQHIVEG 67
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI + ++ + DV++ GFPCQ S G
Sbjct: 68 DIWQAISEMPKNADVVIGGFPCQDISVNG 96
>gi|300717257|ref|YP_003742060.1| cytosine-specific methyltransferase [Erwinia billingiae Eb661]
gi|299063093|emb|CAX60213.1| Cytosine-specific methyltransferase [Erwinia billingiae Eb661]
Length = 466
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N YSV+TY+AN+ DI
Sbjct: 93 FRFIDLFAGIGGIRSGFE----AIGGQCVFTSEWNKYSVRTYKANWYCDPDAHRFNQDIR 148
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
+ + +PDHDVLLAGFPCQPFS AG
Sbjct: 149 DVTLSGNPAVSEQQAYQHIDKQVPDHDVLLAGFPCQPFSLAG 190
>gi|305666023|ref|YP_003862310.1| putative DNA modification methylase [Maribacter sp. HTCC2170]
gi|88710798|gb|EAR03030.1| putative DNA modification methylase (N.MgoV) [Maribacter sp.
HTCC2170]
Length = 493
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGG RL L+ EC SEIN ++ Y NF + K
Sbjct: 4 FSFIDLFSGIGGFRLGLQ----RNGGECIGFSEINKDAIDFYCENFGDDRSENLGNITKI 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+++P HD+L AG PCQ +S AG
Sbjct: 60 ENLPQHDLLTAGVPCQSWSIAG 81
>gi|289167787|ref|YP_003446056.1| site-specific DNA methylase [Streptococcus mitis B6]
gi|288907354|emb|CBJ22191.1| site-specific DNA methylase [Streptococcus mitis B6]
Length = 346
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
LKI LF G GG + F+ +E ++++I + K ++ NF T
Sbjct: 4 LKIASLFSGGGGTDIGFAGGFDFLGKHYADNQIEIVYANDIEDSANKMFEKNFGVTPDNR 63
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
+I +IK+ +IP D+L GFPCQ FS
Sbjct: 64 NIREIKSDEIPSFDILTGGFPCQSFSV 90
>gi|148988377|ref|ZP_01819824.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
SP6-BS73]
gi|147926058|gb|EDK77132.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
SP6-BS73]
Length = 343
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
LKI LF G GG + F+ +E ++++I + K ++ NF T
Sbjct: 4 LKIASLFSGGGGTDIGFAGGFDFLGKHYADNQIEIVYANDIEDSANKMFEKNFGVTPDNR 63
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
+I +IK+ +IP D+L GFPCQ FS
Sbjct: 64 NIREIKSDEIPSFDILTGGFPCQSFSV 90
>gi|331090242|ref|ZP_08339130.1| hypothetical protein HMPREF1025_02713 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330402188|gb|EGG81760.1| hypothetical protein HMPREF1025_02713 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 464
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
L DL GIGG RL LE C E + ++ + D+ K+
Sbjct: 4 LTFLDLCSGIGGFRLGLESA----GHRCIGYCEYDRFARASYEAMYDTEGEWKADDVTKL 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K++D+P D+ GFPCQ S AG
Sbjct: 60 KSEDVPYADIWCFGFPCQDISVAG 83
>gi|313201769|ref|YP_004040427.1| modification methylase [Methylovorus sp. MP688]
gi|312441085|gb|ADQ85191.1| putative modification methylase [Methylovorus sp. MP688]
Length = 378
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K +LF GIGG RL +++N+ F+++I + Y + F +++ K
Sbjct: 1 MKAVELFSGIGGFRL----ACDNKNIRTVFANDIKTLACDVYASQFGTSVLHRGDIKDFF 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L AGFPCQPFS AG
Sbjct: 57 DKIPDHDLLTAGFPCQPFSSAG 78
>gi|20385949|gb|AAM21516.1|AF438205_2 GST-M.SPRX methyltransferase fusion protein [Mutation screening
vector pSPRX]
Length = 659
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
L++ LF GIGG L E SEI+ Y+VK++ N L FGD++KI
Sbjct: 230 LRVMSLFSGIGGFEAALRNIG--VGYELVGFSEIDKYAVKSFCAIHNVDEQLNFGDVSKI 287
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +P+ D+L+ G PCQ FS AG
Sbjct: 288 DKKKLPEFDILVGGSPCQSFSVAG 311
>gi|317181803|dbj|BAJ59587.1| Type II DNA modification enzyme [Helicobacter pylori F57]
Length = 351
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T DI ++
Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKKTQTILCDIMQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83
>gi|308063322|gb|ADO05209.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Sat464]
Length = 348
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQ N DI ++
Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQVNHKEVQTILCDIMQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83
>gi|317179147|dbj|BAJ56935.1| Type II DNA modification enzyme [Helicobacter pylori F30]
Length = 351
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T DI ++
Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKETQTILCDIMQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83
>gi|535137|emb|CAA56493.1| type II DNA-methyltransferase [Bacillus phage phi3T]
Length = 326
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ +LFCG G + E + +I+ +VK Y+ NF + + DI +I
Sbjct: 14 FTVLELFCGGGLGATGFKSA----GYEIVKALDIDKNAVKAYRHNFGDYVEQADINEIDI 69
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+PD DV+ G PCQ FS AG
Sbjct: 70 DSLPDTDVIFGGPPCQDFSVAG 91
>gi|255022454|ref|ZP_05294440.1| hypothetical protein LmonocyFSL_01025 [Listeria monocytogenes FSL
J1-208]
Length = 150
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDIA 57
DLF G+GG RL +E +C EI+ Y+ +Y A I+
Sbjct: 12 TFVDLFAGVGGFRLGMEAA----GHKCVGYVEIDKYARTSYTAIHQTEGEFEGHDITSIS 67
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I D++ GFPCQ FS AG
Sbjct: 68 DDVIRSIGRVDIITGGFPCQAFSIAG 93
>gi|306824635|ref|ZP_07457980.1| DNA methylase [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304433203|gb|EFM36174.1| DNA methylase [Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 410
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
I F G+GGI L EQT +++E + Y+ +TYQ N P+T DI ++
Sbjct: 13 YNIAAFFSGVGGIELGFEQTNE---FRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQ 69
Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83
+DIP D+++ GFPCQ FS AG
Sbjct: 70 PEDIPVERVDIIMGGFPCQAFSIAG 94
>gi|225019628|ref|ZP_03708820.1| hypothetical protein CLOSTMETH_03581 [Clostridium methylpentosum
DSM 5476]
gi|224947595|gb|EEG28804.1| hypothetical protein CLOSTMETH_03581 [Clostridium methylpentosum
DSM 5476]
Length = 390
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M KI DLF G GG+ + + + E + Y+ NF + + D++ ++
Sbjct: 1 MKKIVDLFAGCGGLSMGFQDA----GFNIVGAFEFWDIAADCYEKNFEHPVYRMDLSDVE 56
Query: 61 TQDIP----DHDVLLAGFPCQPFSQAG 83
++++ G PCQ FS AG
Sbjct: 57 KSVEKIKLLKPEIIIGGPPCQDFSHAG 83
>gi|259908144|ref|YP_002648500.1| DNA cytosine methylase [Erwinia pyrifoliae Ep1/96]
gi|224963766|emb|CAX55267.1| DNA-cytosine methyltransferase [Erwinia pyrifoliae Ep1/96]
gi|283478063|emb|CAY73979.1| DNA cytosine methylase [Erwinia pyrifoliae DSM 12163]
Length = 467
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 47/102 (46%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ + + DI
Sbjct: 93 FRFIDLFAGIGGIRSGFE----AIGGQCAFTSEWNKHAVRTYKANWYCDERQHRFNQDIR 148
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q +PDHDVLLAGFPCQPFS AG
Sbjct: 149 DVTLSGKPEITDRQAYQHIQQQVPDHDVLLAGFPCQPFSLAG 190
>gi|332362221|gb|EGJ40021.1| DNA methylase [Streptococcus sanguinis SK1056]
Length = 412
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
I F G+GGI L EQT +++E + Y+ +TYQ N P+T DI ++
Sbjct: 19 YNIAAFFSGVGGIELGFEQTNE---FRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQ 75
Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83
+DIP DV++ GFPCQ FS AG
Sbjct: 76 PEDIPAERVDVIMGGFPCQAFSIAG 100
>gi|322376119|ref|ZP_08050628.1| DNA modification methylase [Streptococcus sp. C300]
gi|321278887|gb|EFX55931.1| DNA modification methylase [Streptococcus sp. C300]
Length = 406
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
I F G+GGI L EQT +++E + Y+ +TYQ N P+T DI ++
Sbjct: 13 YNIAAFFSGVGGIELGFEQTNE---FRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQ 69
Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83
+DIP DV++ GFPCQ FS AG
Sbjct: 70 PEDIPAERVDVIMGGFPCQAFSIAG 94
>gi|322392562|ref|ZP_08066022.1| DNA methylase [Streptococcus peroris ATCC 700780]
gi|321144554|gb|EFX39955.1| DNA methylase [Streptococcus peroris ATCC 700780]
Length = 406
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
I F G+GGI L EQT +++E + Y+ +TYQ N P+T DI ++
Sbjct: 13 YNIAAFFSGVGGIELGFEQTNE---FRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQ 69
Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83
+DIP DV++ GFPCQ FS AG
Sbjct: 70 PEDIPAERVDVIMGGFPCQAFSIAG 94
>gi|307710826|ref|ZP_07647254.1| DNA-cytosine methyltransferase family protein [Streptococcus
mitis SK321]
gi|307617432|gb|EFN96604.1| DNA-cytosine methyltransferase family protein [Streptococcus
mitis SK321]
Length = 406
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
I F G+GGI L EQT +++E + Y+ +TYQ N P+T DI ++
Sbjct: 13 YNIAAFFSGVGGIELGFEQTNE---FRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQ 69
Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83
+DIP DV++ GFPCQ FS AG
Sbjct: 70 PEDIPAERVDVIMGGFPCQAFSIAG 94
>gi|157151353|ref|YP_001449946.1| cytosine-specific methyltransferase [Streptococcus gordonii str.
Challis substr. CH1]
gi|157076147|gb|ABV10830.1| cytosine-specific methyltransferase [Streptococcus gordonii str.
Challis substr. CH1]
Length = 406
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
I F G+GGI L EQT +++E + Y+ +TYQ N P+T DI ++
Sbjct: 13 YNIAAFFSGVGGIELGFEQTNE---FRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQ 69
Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83
+DIP DV++ GFPCQ FS AG
Sbjct: 70 PEDIPAERVDVIMGGFPCQAFSIAG 94
>gi|323191533|gb|EFZ76794.1| modification methylase EcoRII [Escherichia coli RN587/1]
Length = 474
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----SIGGQCVFTSEWNKEAVRTYKANWFNDELNHKFNLDIR 151
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
++ D PDHDVLLAGFPCQPFS AG
Sbjct: 152 EVTLSDRDDVSEMEAYNHIDKNIPDHDVLLAGFPCQPFSLAG 193
>gi|331645413|ref|ZP_08346517.1| modification methylase EcoRII (Cytosine-specificmethyltransferase
EcoRII) (M.EcoRII) [Escherichia coli M605]
gi|331045575|gb|EGI17701.1| modification methylase EcoRII (Cytosine-specificmethyltransferase
EcoRII) (M.EcoRII) [Escherichia coli M605]
Length = 474
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----SIGGQCVFTSEWNKEAVRTYKANWFNDELNHKFNLDIR 151
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
++ D PDHDVLLAGFPCQPFS AG
Sbjct: 152 EVTLSDRDDVSEMEAYNHIDKNIPDHDVLLAGFPCQPFSLAG 193
>gi|209527672|ref|ZP_03276170.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209491900|gb|EDZ92257.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 429
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/83 (49%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
K DLF GIGG+RL EQ +C SSEI+ + + YQANF GDI I
Sbjct: 5 KFIDLFAGIGGLRLGFEQALESLGCIPDCLLSSEIDGDARQVYQANFS-ETPQGDIQTIP 63
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ +P H VLLAGFPCQ FS AG
Sbjct: 64 S--LPPHHVLLAGFPCQSFSYAG 84
>gi|254779148|ref|YP_003057253.1| M. Hpy99XI, type II cytosine specific DNA methyltransferase
[Helicobacter pylori B38]
gi|254001059|emb|CAX29005.1| M. Hpy99XI, type II cytosine specific DNA methyltransferase
[Helicobacter pylori B38]
Length = 348
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H + E ++++I+ ++ +YQAN DI ++
Sbjct: 1 MYKVADIFCGAGGLSYGFS---VHSHFELIWANDIDKDAILSYQANHKEVQTILCDIVQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 HCHNLPRVSIDILLGGPPCQSYSTLG 83
>gi|124005671|ref|ZP_01690510.1| site-specific DNA-methyltransferase [Microscilla marina ATCC
23134]
gi|123988739|gb|EAY28345.1| site-specific DNA-methyltransferase [Microscilla marina ATCC
23134]
Length = 352
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ LF G+GG L F+ E NP+ + +P+T+ + DI +
Sbjct: 1 MRHASLFSGLGGFDL----AAQRMGWVNVFTVENNPFCQAILRHYWPDTIHYEDIRQTNF 56
Query: 62 Q-DIPDHDVLLAGFPCQPFSQAG 83
D++ GFPCQPFS AG
Sbjct: 57 HPYYGKVDIITGGFPCQPFSNAG 79
>gi|260591129|ref|ZP_05856587.1| modification methylase AluI [Prevotella veroralis F0319]
gi|260536994|gb|EEX19611.1| modification methylase AluI [Prevotella veroralis F0319]
Length = 452
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF G+GG L L+ +C F+SE+ Y+ NF
Sbjct: 10 YTFIDLFAGLGGFHLALQ----KLGCKCVFASELQTDLQTLYERNFNMKCSGNINDVNIK 65
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIP HD+L GFPCQPFSQAG
Sbjct: 66 TDIPHHDILCGGFPCQPFSQAG 87
>gi|167753338|ref|ZP_02425465.1| hypothetical protein ALIPUT_01612 [Alistipes putredinis DSM
17216]
gi|167659269|gb|EDS03399.1| hypothetical protein ALIPUT_01612 [Alistipes putredinis DSM
17216]
Length = 319
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ LF GIGG L E F+ EI+P+ K + +FPN + DI
Sbjct: 1 MTHASLFSGIGGFDLAAEWA----GWTNAFNCEIDPFCRKVLKYHFPNAEQYEDIRATDF 56
Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83
D DVL GFPCQPFS AG
Sbjct: 57 TVWKDRIDVLTGGFPCQPFSLAG 79
>gi|317012300|gb|ADU82908.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Lithuania75]
Length = 348
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T DI ++
Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKKTQTILCDIMQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 DCHNLPCVSIDILLGGPPCQSYSTLG 83
>gi|328947436|ref|YP_004364773.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
gi|328447760|gb|AEB13476.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
Length = 439
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGG RL ++ +C FSSE + + K + FGDI K +
Sbjct: 96 FTFIDLFAGIGGFRLAMQ----SCGGQCVFSSEWD-DAAKQTYFENYGEVPFGDITKTEI 150
Query: 62 QD--IPDHDVLLAGFPCQPFSQAG 83
+D DVL AGFPCQPFS +G
Sbjct: 151 KDLIPKKFDVLCAGFPCQPFSYSG 174
>gi|188527268|ref|YP_001909955.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi470]
gi|188143508|gb|ACD47925.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi470]
Length = 348
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T DI ++
Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKETQTILCDIMQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83
>gi|304407248|ref|ZP_07388901.1| DNA-cytosine methyltransferase [Paenibacillus curdlanolyticus
YK9]
gi|304343689|gb|EFM09530.1| DNA-cytosine methyltransferase [Paenibacillus curdlanolyticus
YK9]
Length = 401
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI 59
M K+ DLF G GG+ Q + S EI+ + T + N P T + D+ ++
Sbjct: 1 MYKVLDLFSGCGGLGEGFLQA----GFDIAASVEIDEKACATQKFNHPETQVLQADLTQL 56
Query: 60 KTQD------IPDHDVLLAGFPCQPFSQAG 83
+D I + D+++ G PCQ FS G
Sbjct: 57 APRDLSLATGITNFDLIIGGPPCQGFSLIG 86
>gi|167854713|ref|ZP_02477492.1| cell division protein MukB [Haemophilus parasuis 29755]
gi|167854127|gb|EDS25362.1| cell division protein MukB [Haemophilus parasuis 29755]
Length = 361
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60
DLF GIGG RL +E+ + C FSSEI+ + KTY NF + + K
Sbjct: 37 FTFIDLFAGIGGFRLAMEKLGGY----CVFSSEIDENAQKTYATNFGEKPYGDITLEETK 92
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+L AGFPCQ FS AG
Sbjct: 93 RLIPTTFDILCAGFPCQAFSIAG 115
>gi|325268581|ref|ZP_08135211.1| prophage LambdaBa01 protein [Prevotella multiformis DSM 16608]
gi|324989109|gb|EGC21062.1| prophage LambdaBa01 protein [Prevotella multiformis DSM 16608]
Length = 444
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI-AKI 59
+++ LF GIG E + F EIN + FPN++ + +I
Sbjct: 4 IIRHASLFSGIG----APELAALWLGWQNVFHCEINEFCNTILNYWFPNSINYENIKTTD 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
++ D+L GFPCQPFS AG
Sbjct: 60 FSRWQGQIDILTGGFPCQPFSSAG 83
>gi|281491829|ref|YP_003353809.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp.
lactis KF147]
gi|281375540|gb|ADA65046.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp.
lactis KF147]
Length = 351
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
+I LF G GG + F+ VE F+++I + + ++ NF
Sbjct: 4 FRIASLFSGGGGTDIGFSGGFDFLGNHYKNNNVEIVFANDIEEKANEFFEENFKLKPESR 63
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
I I + ++PD D+L GFPCQ FS
Sbjct: 64 SIRDIDSSELPDFDILTGGFPCQSFSV 90
>gi|168234623|ref|ZP_02659681.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194736513|ref|YP_002117411.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194712015|gb|ACF91236.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197291717|gb|EDY31067.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 474
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----AIGGQCVFTSEWNKEAVRTYKANWYNDEDAHTFNLDIR 151
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
++ Q IPDHDVLLAGFPCQPFS AG
Sbjct: 152 EVTLSGEEGISEEKAYAHIDQHIPDHDVLLAGFPCQPFSLAG 193
>gi|161617789|ref|YP_001591754.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|161367153|gb|ABX70921.1| hypothetical protein SPAB_05653 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 474
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----AIGGQCVFTSEWNKEAVRTYKANWYNDEDAHTFNLDIR 151
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
++ Q IPDHDVLLAGFPCQPFS AG
Sbjct: 152 EVTLSGEEGISEEKAYAHIDQHIPDHDVLLAGFPCQPFSLAG 193
>gi|161505003|ref|YP_001572115.1| DNA cytosine methylase [Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|160866350|gb|ABX22973.1| hypothetical protein SARI_03133 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 474
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----AIGGQCVFTSEWNKEAVRTYKANWYNDEDAHTFNLDIR 151
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
++ Q IPDHDVLLAGFPCQPFS AG
Sbjct: 152 EVTLSGEEGISEEKAYAHIDQHIPDHDVLLAGFPCQPFSLAG 193
>gi|157147667|ref|YP_001454986.1| DNA cytosine methylase [Citrobacter koseri ATCC BAA-895]
gi|157084872|gb|ABV14550.1| hypothetical protein CKO_03470 [Citrobacter koseri ATCC BAA-895]
Length = 474
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 96 FRFIDLFAGIGGIRKGFE----AIGGQCVFTSEWNKEAVRTYKANWYNDEDAHTFNLDIR 151
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
++ Q IPDHDVLLAGFPCQPFS AG
Sbjct: 152 EVTLSGEEGISEEKAYAHIDQHIPDHDVLLAGFPCQPFSLAG 193
>gi|288958310|ref|YP_003448651.1| DNA (cytosine-5-)-methyltransferase [Azospirillum sp. B510]
gi|288910618|dbj|BAI72107.1| DNA (cytosine-5-)-methyltransferase [Azospirillum sp. B510]
Length = 375
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ DLFCG GG+ L Q F+ + + ++ +TY+ NF + +I GDI +I++
Sbjct: 31 KLIDLFCGAGGLTLGFVQA----GFRPVFAIDDDRHAAETYRLNFGDHIICGDIRQIESF 86
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
P DV++ G PCQ FS+ G
Sbjct: 87 --PAADVVIGGPPCQGFSRLG 105
>gi|127417|sp|P25262|MTB1_HERAU RecName: Full=Modification methylase HgiBI; Short=M.HgiBI;
AltName: Full=Cytosine-specific methyltransferase HgiBI
gi|43478|emb|CAA38927.1| methyltransferase [Herpetosiphon aurantiacus]
Length = 437
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGG RL LE C S+EI+ ++K Y+ N+P + ++ I
Sbjct: 4 FRFIDLFAGIGGFRLGLE----AVGGVCVASAEIDQQAIKVYRQNWPTDGVDHNLGDITA 59
Query: 62 QDI-PDHDVLLAGFPCQPFSQAG 83
P HDVL+ G PCQP+S AG
Sbjct: 60 IQQLPAHDVLVGGVPCQPWSIAG 82
>gi|308182632|ref|YP_003926759.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori PeCan4]
gi|308064817|gb|ADO06709.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori PeCan4]
Length = 351
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN DI ++
Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHEEVQTILCDIMQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83
>gi|297622183|ref|YP_003675732.1| EcoRII cytosine-methyltransferase [Klebsiella oxytoca KOX105]
gi|296492002|gb|ADH29504.1| EcoRII cytosine-methyltransferase [Klebsiella oxytoca KOX105]
Length = 491
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 110 FRFIDLFAGIGGIRKGFET----IGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 165
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
++ D PDHDVLLAGFPCQPFS AG
Sbjct: 166 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 207
>gi|296538000|gb|ADH30019.1| EcoRII cytosine methylase [Escherichia coli O25b:H4 str. EC958]
Length = 477
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 96 FRFIDLFAGIGGIRKGFET----IGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 151
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
++ D PDHDVLLAGFPCQPFS AG
Sbjct: 152 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 193
>gi|160431610|ref|YP_001551777.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Dublin]
gi|298206539|ref|YP_003717476.1| EcoRII modification enzyme [Escherichia coli]
gi|159885479|dbj|BAF93082.1| modification methylase EcoRII [Salmonella enterica subsp. enterica
serovar Dublin]
gi|296537944|gb|ADH29964.1| EcoRII modification enzyme [Escherichia coli O25b:H4 str. EC958]
Length = 477
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 96 FRFIDLFAGIGGIRKGFET----IGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 151
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
++ D PDHDVLLAGFPCQPFS AG
Sbjct: 152 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 193
>gi|48093754|gb|AAT40239.1| Eco128I DNA methylase [Escherichia coli]
Length = 332
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 15 FRFIDLFAGIGGIRKGFET----IGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 70
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
++ D PDHDVLLAGFPCQPFS AG
Sbjct: 71 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 112
>gi|133756232|ref|YP_001096382.1| DNA cytosine methylase [Escherichia coli]
gi|110084067|gb|ABG49221.1| hypothetical protein [Escherichia coli]
Length = 566
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 185 FRFIDLFAGIGGIRKGFET----IGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 240
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
++ D PDHDVLLAGFPCQPFS AG
Sbjct: 241 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 282
>gi|113706802|ref|YP_724464.1| DNA cytosine methylase [Escherichia coli]
gi|190576899|ref|YP_001966231.1| M.EcoRII DNA methylase [Klebsiella pneumoniae]
gi|194433606|ref|ZP_03065883.1| modification methylase EcoRII [Shigella dysenteriae 1012]
gi|209901141|ref|YP_002286923.1| DNA cytosine methylase [Klebsiella pneumoniae]
gi|209901236|ref|YP_002287017.1| DNA cytosine methylase [Klebsiella pneumoniae]
gi|215528089|ref|YP_002332862.1| EcoRII cytosine methylase [Klebsiella pneumoniae]
gi|302141639|ref|YP_003813098.1| EcoRII methylase [Klebsiella pneumoniae]
gi|127448|sp|P05101|MTE2_ECOLX RecName: Full=Modification methylase EcoRII; Short=M.EcoRII;
AltName: Full=Cytosine-specific methyltransferase EcoRII
gi|41317|emb|CAA28725.1| unnamed protein product [Escherichia coli HB101]
gi|109390538|gb|ABG33840.1| EcoRII modification enzyme [Escherichia coli]
gi|110264483|gb|ABG56846.1| M.EcoRII DNA methylase [Klebsiella pneumoniae]
gi|165928612|gb|ABY74380.1| EcoRII cytosine methylase [Klebsiella pneumoniae]
gi|194418198|gb|EDX34290.1| modification methylase EcoRII [Shigella dysenteriae 1012]
gi|197092209|gb|ACH42172.1| EcoRII cytosine methylase [Klebsiella pneumoniae]
gi|209574187|gb|ACI63075.1| modification methylase [Klebsiella pneumoniae]
gi|209574298|gb|ACI63184.1| modification methylase [Klebsiella pneumoniae]
gi|296033904|gb|ADG84867.1| EcoRII methylase [Klebsiella pneumoniae]
Length = 477
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN+ N DI
Sbjct: 96 FRFIDLFAGIGGIRKGFET----IGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIR 151
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
++ D PDHDVLLAGFPCQPFS AG
Sbjct: 152 EVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAG 193
>gi|119493084|ref|ZP_01624009.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106]
gi|119452829|gb|EAW34004.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106]
Length = 441
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--------- 55
DLF G GG+ L EQ + + EI+P +Q NFP +F +
Sbjct: 17 VDLFAGSGGMTLGFEQA----GFDVLAAVEIDPIHCAVHQYNFPLWSVFCEDISKLSSDK 72
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + D DV+ G PCQ FS G
Sbjct: 73 IRIYSSIKNQDIDVVFGGPPCQGFSLMG 100
>gi|15611502|ref|NP_223153.1| type II DNA modification (methyltransferase [Helicobacter pylori
J99]
gi|4154963|gb|AAD06007.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter
pylori J99]
Length = 351
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T DIA++
Sbjct: 1 MYKVADIFCGAGGLSYGFST---HPYFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57
Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 HCHNLPRVPIDILLGGPPCQSYSTLG 83
>gi|323222462|gb|EGA06833.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
Length = 203
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|154149305|ref|YP_001405677.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Campylobacter
hominis ATCC BAA-381]
gi|153805314|gb|ABS52321.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Campylobacter
hominis ATCC BAA-381]
Length = 88
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59
M K DLF GIGGIRL +Q F ++ F SE++ +V+TY+ANF +++ DI K+
Sbjct: 1 MYKSIDLFAGIGGIRLGFDQAFGDD-IKTVFISELDEKAVETYKANFNDSIDVVGDITKV 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ IP+HD+LLAGFPCQ FS AG
Sbjct: 60 DEKKIPEHDILLAGFPCQAFSLAG 83
>gi|10957343|ref|NP_058367.1| DNA cytosine methylase [Salmonella typhi]
gi|7800396|gb|AAF69992.1|AF250878_153 EcoRII cytosine methylase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|145849042|emb|CAM91602.1| ecoRII cytosine methylase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 475
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGG+R + +C F+SE N +S + + DI
Sbjct: 92 FRFIDLFAGIGGLRSGF----DAIGGKCVFTSEWNQFSRRTYSANWYCEDTEHHFNSDIR 147
Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83
I + IPDHDVLLAGFPCQPFS AG
Sbjct: 148 DITLSNLPDVSEDQAYASIAASIPDHDVLLAGFPCQPFSIAG 189
>gi|238788388|ref|ZP_04632182.1| DNA-cytosine methyltransferase [Yersinia frederiksenii ATCC
33641]
gi|238723634|gb|EEQ15280.1| DNA-cytosine methyltransferase [Yersinia frederiksenii ATCC
33641]
Length = 380
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI-AKIK 60
K+ DLFCG GG+ + E + + + +++TY ANF N + +I I
Sbjct: 11 FKVIDLFCGAGGLSAGFLKGKQANYFESILAIDNDTAAIRTYNANFGNHGVTANIDEWIA 70
Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81
+IP D+++ G PCQ FS
Sbjct: 71 ENEIPQADIVIGGPPCQGFSL 91
>gi|282859944|ref|ZP_06269032.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010]
gi|282587347|gb|EFB92564.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010]
Length = 448
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
DLF GIGG R+ ++ + C FSSE + + KTY + K
Sbjct: 114 FTFIDLFAGIGGFRMAMQ----NLGGRCVFSSEWDIQAQKTYFLNYGEVPFGDITQERTK 169
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+L AGFPCQ FS AG
Sbjct: 170 AYIPDHFDILCAGFPCQAFSLAG 192
>gi|16272974|ref|NP_439200.1| modification methylase [Haemophilus influenzae Rd KW20]
gi|1171050|sp|P45000|MTH5_HAEIN RecName: Full=Modification methylase HindV; Short=M.HindV;
AltName: Full=Cytosine-specific methyltransferase HindV
gi|1574073|gb|AAC22700.1| modification methylase [Haemophilus influenzae Rd KW20]
Length = 304
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
+K DLF G GG+ L E E + E +++ Y+ NF + + D+
Sbjct: 1 MKCVDLFSGCGGLSLGFELA----GFEICAAFENWEKAIEIYKNNFSHPIYNIDLRNEKE 56
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
++ D+++ G PCQ FS AG
Sbjct: 57 AVEKIKKYSPDLIMGGPPCQDFSSAG 82
>gi|307565390|ref|ZP_07627879.1| C-5 cytosine-specific DNA methylase [Prevotella amnii CRIS 21A-A]
gi|307345840|gb|EFN91188.1| C-5 cytosine-specific DNA methylase [Prevotella amnii CRIS 21A-A]
Length = 492
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI-AKI 59
+++ LF GIG E + F EIN + FPN++ + +I
Sbjct: 4 IIRHASLFSGIG----APELAALWLGWQNVFHCEINEFCNTILSYWFPNSINYENIKTTD 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
++ D+L GFPCQPFS AG
Sbjct: 60 FSKWQGQIDILTGGFPCQPFSSAG 83
>gi|314942817|ref|ZP_07849633.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
TX0133C]
gi|314953501|ref|ZP_07856416.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
TX0133A]
gi|314992545|ref|ZP_07857964.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
TX0133B]
gi|314997818|ref|ZP_07862728.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
TX0133a01]
gi|313588159|gb|EFR67004.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
TX0133a01]
gi|313592912|gb|EFR71757.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
TX0133B]
gi|313594483|gb|EFR73328.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
TX0133A]
gi|313598452|gb|EFR77297.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
TX0133C]
Length = 144
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
++ DLF GIGG RL +EQ +H C EI+ ++ ++Y+A +
Sbjct: 1 MRFLDLFAGIGGFRLGMEQASHH----CIGFCEIDKFARRSYKAIHDTSKEVEMHDITSV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q + D+L GFPCQ FS AG
Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83
>gi|317180646|dbj|BAJ58432.1| Type II DNA modification enzyme [Helicobacter pylori F32]
Length = 348
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T DI ++
Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKETQTILCDIMQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 DCHNLPCVSIDILLGGPPCQSYSTLG 83
>gi|212694208|ref|ZP_03302336.1| hypothetical protein BACDOR_03734 [Bacteroides dorei DSM 17855]
gi|212663274|gb|EEB23848.1| hypothetical protein BACDOR_03734 [Bacteroides dorei DSM 17855]
Length = 370
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ LF G GG+ + + H F++++ + TY+ N + +I GDI +
Sbjct: 12 IRTISLFSGAGGLDIGAIKAGAH----VVFANDMMKEACLTYKENIGDHIIQGDINTLFD 67
Query: 62 QDIP--DHDVLLAGFPCQPFSQAG 83
+ + D+++ G PCQ FS AG
Sbjct: 68 EIGKVDNPDLVIGGPPCQGFSVAG 91
>gi|206972340|ref|ZP_03233286.1| C-5 cytosine-specific DNA methylase [Bacillus cereus AH1134]
gi|206732665|gb|EDZ49841.1| C-5 cytosine-specific DNA methylase [Bacillus cereus AH1134]
Length = 503
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+I LF G G L + + F+ E + +VKTY+ N ++ DI
Sbjct: 182 LQIVSLFSGSGVFDLGF----KNEGFDIIFAIEKDEDAVKTYRHNLGEHVVCHDITTYPK 237
Query: 62 QDIPDHDVLLAGFPCQPFSQ 81
+DIP+ +++ G PCQ FS
Sbjct: 238 KDIPNAPIIIGGPPCQGFSN 257
>gi|317010732|gb|ADU84479.1| type II DNA modification (methyltransferase) [Helicobacter pylori
SouthAfrica7]
Length = 348
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T DIA++
Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57
Query: 60 KTQDIPDH--DVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 DCYNLPCTSIDILLGGPPCQSYSTLG 83
>gi|90408525|ref|ZP_01216682.1| DNA-methyltransferase (cytosine-specific) [Psychromonas sp. CNPT3]
gi|90310344|gb|EAS38472.1| DNA-methyltransferase (cytosine-specific) [Psychromonas sp. CNPT3]
Length = 380
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 20/102 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
K+ LF G+GG+ L + FN + + +++E++ ++KTY+ NF + +I GDI KI
Sbjct: 3 YKVGSLFAGVGGVCLGFKSAFNEKGGYQLIWANELDEQAIKTYRCNFEHNMIPGDIEKIV 62
Query: 61 TQDI-------------------PDHDVLLAGFPCQPFSQAG 83
+ DVL AGFPCQ FS AG
Sbjct: 63 KPERAKADGEEALFAQKKMQMLAQPIDVLTAGFPCQAFSIAG 104
>gi|76788592|ref|YP_329366.1| prophage LambdaSa04, methyltransferase C-5 [Streptococcus
agalactiae A909]
gi|76563649|gb|ABA46233.1| prophage LambdaSa04, methyltransferase, C-5 cytosine-specific
family [Streptococcus agalactiae A909]
Length = 417
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
L D F G+GG R LE + C E + ++ K+Y + DI I
Sbjct: 3 LTFLDFFAGVGGFRRGLELA----GMTCLGYCEKDKFARKSYEAMYDTEGEWFHDDITSI 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+P D+ AG PCQ S AG
Sbjct: 59 DPTRLPKADLWTAGSPCQNLSIAG 82
>gi|323487872|ref|ZP_08093130.1| cytosine-specific methyltransferase [Planococcus donghaensis
MPA1U2]
gi|323398606|gb|EGA91394.1| cytosine-specific methyltransferase [Planococcus donghaensis
MPA1U2]
Length = 367
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGD 55
+ K LF G GG+ + + + +++EI+ + TY+ N P T +
Sbjct: 4 IYKGISLFTGAGGMDVGFKSA----GIHVEWANEIDKDACNTYETNNPETILAKGDLRNY 59
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I +K + D D++ G PCQ FS AG
Sbjct: 60 IETLK--EHRDIDIVFGGPPCQGFSVAG 85
>gi|168205340|ref|ZP_02631345.1| putative modification methylase Eco47II [Clostridium perfringens E
str. JGS1987]
gi|170663208|gb|EDT15891.1| putative modification methylase Eco47II [Clostridium perfringens E
str. JGS1987]
Length = 437
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
++++ +F G G + ++ + F+S+I + ++Y+ N N ++ I +I
Sbjct: 118 IIRVVSMFSGAGMLDYAFH---KDQDFKIVFASDIMKEACESYRENIGNHIVNKSITEIN 174
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
+ +IP DV+L G PC+PFS A
Sbjct: 175 SNEIPVADVILGGVPCKPFSNA 196
>gi|308172812|ref|YP_003919517.1| DNA (cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens DSM
7]
gi|307605676|emb|CBI42047.1| DNA (cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens DSM
7]
Length = 406
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + +LFCG G + + + + + +VK Y+ NF + + DI+ +
Sbjct: 105 MNVLELFCGGGLGAIGFKAA----GYNIVKALDFDKNAVKAYRHNFGDYVEQADISAVDI 160
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+PD DV+ G PCQ FS AG
Sbjct: 161 DSLPDTDVIFGGPPCQDFSVAG 182
>gi|260580130|ref|ZP_05847960.1| site-specific DNA-methyltransferase (cytosine-specific)
[Haemophilus influenzae RdAW]
gi|260093414|gb|EEW77347.1| site-specific DNA-methyltransferase (cytosine-specific)
[Haemophilus influenzae RdAW]
Length = 304
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
+K DLF G GG+ L E E + E +++ Y+ NF + + D+
Sbjct: 1 MKCVDLFSGCGGLSLGFELA----GFEICAAFENWEKAIEIYKNNFSHPIYNIDLRNEKE 56
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
++ D+++ G PCQ FS AG
Sbjct: 57 AVEKIKKYSPDLIMGGPPCQDFSSAG 82
>gi|299142721|ref|ZP_07035850.1| C-5 cytosine-specific DNA methylase superfamily [Prevotella oris
C735]
gi|298575750|gb|EFI47627.1| C-5 cytosine-specific DNA methylase superfamily [Prevotella oris
C735]
Length = 398
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI-AKI 59
+++ LF GIG E + F EIN + FPN++ + +I
Sbjct: 4 IIRHASLFSGIG----APELAALWLGWQNVFHCEINEFCNTILNYWFPNSINYENIKTTN 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+Q D+L GFPCQPFS AG
Sbjct: 60 FSQWQGKIDILTGGFPCQPFSSAG 83
>gi|308235652|ref|ZP_07666389.1| DcmB [Gardnerella vaginalis ATCC 14018]
gi|311115197|ref|YP_003986418.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis ATCC
14019]
gi|310946691|gb|ADP39395.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis ATCC
14019]
Length = 333
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL------IFGD 55
+K+ LF G GG+ L E+ E ++E + T++ N P T
Sbjct: 1 MKVLSLFSGCGGLDLGFEKA----GFEIPVANEFDKTIWDTFKINHPKTHLIEGDVRKVS 56
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + D ++ G PCQ +S+AG
Sbjct: 57 KNDISEYLSGNLDGIIGGPPCQSWSEAG 84
>gi|315174236|gb|EFU18253.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX1346]
Length = 192
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+ DLF GIGG RL +EQ +C EI+ ++ ++Y+A +
Sbjct: 1 MTFLDLFAGIGGFRLGMEQA----GHQCIGFCEIDEFARRSYKAIHDTSKEVEMHDITSV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + + DVL GFPCQ FS AG
Sbjct: 57 SDEFVRSLGPVDVLCGGFPCQAFSIAG 83
>gi|313651376|gb|EFS15772.1| modification methylase EcoRII [Shigella flexneri 2a str. 2457T]
Length = 463
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 49/102 (48%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGG+R + +C F+SE N +S +TY AN+ DI
Sbjct: 80 FRFIDLFAGIGGLRSGF----DAIGGKCVFTSEWNQFSRRTYSANWYCDETEHYFNSDIR 135
Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83
I + IPDHDVLLAGFPCQPFS AG
Sbjct: 136 DITLSNLPDVSDDQAYASIDASIPDHDVLLAGFPCQPFSIAG 177
>gi|260752101|ref|YP_003237616.1| putative DNA modification methylase [Escherichia coli O111:H- str.
11128]
gi|257767571|dbj|BAI39065.1| putative DNA modification methylase [Escherichia coli O111:H- str.
11128]
Length = 475
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 49/102 (48%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGG+R + +C F+SE N +S +TY AN+ DI
Sbjct: 92 FRFIDLFAGIGGLRSGF----DAIGGKCVFTSEWNQFSRRTYSANWYCDETEHYFNSDIR 147
Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83
I + IPDHDVLLAGFPCQPFS AG
Sbjct: 148 DITLSNLPDVSDDQAYASIDASIPDHDVLLAGFPCQPFSIAG 189
>gi|18466581|ref|NP_569389.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|160431784|ref|YP_001551898.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Choleraesuis]
gi|16505897|emb|CAD09776.1| putative DNA modification methylase [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|159885325|dbj|BAF92929.1| putative DNA modification methylase [Salmonella enterica subsp.
enterica serovar Choleraesuis]
Length = 475
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 49/102 (48%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF GIGG+R + +C F+SE N +S +TY AN+ DI
Sbjct: 92 FRFIDLFAGIGGLRSGF----DAIGGKCVFTSEWNQFSRRTYSANWYCDETEHYFNSDIR 147
Query: 58 KIKTQD----------------IPDHDVLLAGFPCQPFSQAG 83
I + IPDHDVLLAGFPCQPFS AG
Sbjct: 148 DITLSNLPDVSDDQAYASIDASIPDHDVLLAGFPCQPFSIAG 189
>gi|317009105|gb|ADU79685.1| type II DNA modification [Helicobacter pylori India7]
Length = 348
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN DIA++
Sbjct: 1 MYKVADIFCGAGGLSYGFST---HPYFELIWANDIDKDAILSYQANHKEAQTILCDIAQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83
>gi|282860047|ref|ZP_06269129.1| C-5 cytosine-specific DNA methylase [Prevotella bivia JCVIHMP010]
gi|282587175|gb|EFB92398.1| C-5 cytosine-specific DNA methylase [Prevotella bivia JCVIHMP010]
Length = 526
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI-AKI 59
+++ LF GIG E + F EIN + FPN++ + +I
Sbjct: 4 IIRHASLFSGIG----APELAALWLGWQNVFHCEINEFCNTILSYWFPNSINYENIKTTD 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
++ D+L GFPCQPFS AG
Sbjct: 60 FSKWQGQIDILTGGFPCQPFSSAG 83
>gi|298504551|gb|ADI83274.1| DNA cytosine methyltransferase [Geobacter sulfurreducens KN400]
Length = 428
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLFCG GG+ L + F + ++++ N Y+ +TY NF N + GDI +I +
Sbjct: 36 RVIDLFCGAGGMTLGFTK-FTNHVFTPVWANDFNAYAARTYNRNFGNHCVVGDIVEILER 94
Query: 63 D---IPDHDVLLAGFPCQPFSQ 81
IP DV++ G PCQ FS
Sbjct: 95 PETVIPKADVVIGGPPCQGFSL 116
>gi|288926887|ref|ZP_06420787.1| modification methylase HindV (Cytosine-specific methyltransferase
HindV) [Prevotella buccae D17]
gi|288336326|gb|EFC74707.1| modification methylase HindV (Cytosine-specific methyltransferase
HindV) [Prevotella buccae D17]
Length = 313
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
+K+ DLFCG GG+ L E+ +E + + ++ Y+ NF + I D+
Sbjct: 1 MKVVDLFCGCGGLSLGFEKA----GMEIVAAFDNWVDALYVYRNNFSHPAIRADLMNVKA 56
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
I+ D+++ G PCQ FS AG
Sbjct: 57 SIEAIRPFKPDMIIGGPPCQDFSSAG 82
>gi|313674544|ref|YP_004052540.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
gi|312941242|gb|ADR20432.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
Length = 420
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGG R+ ++ + +C F+SE + + TY+ANF +
Sbjct: 98 FKFIDLFAGIGGFRIAMQ----NLGGKCIFTSEWDSKAKVTYRANFGEEPFGDITKEETK 153
Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83
IP + D+L AGFPCQ FS AG
Sbjct: 154 SYIPDNFDLLCAGFPCQAFSIAG 176
>gi|225076313|ref|ZP_03719512.1| hypothetical protein NEIFLAOT_01354 [Neisseria flavescens
NRL30031/H210]
gi|224952437|gb|EEG33646.1| hypothetical protein NEIFLAOT_01354 [Neisseria flavescens
NRL30031/H210]
Length = 359
Score = 78.8 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGG R+ ++ +C FSSE + + +TY ANF +
Sbjct: 37 FTFIDLFAGIGGFRIAMQ----SLGGKCLFSSEWDDKAQQTYAANFGEIPFGDITTEETK 92
Query: 62 QDIPD-HDVLLAGFPCQPFSQAG 83
IP D+L AGFPCQ FS AG
Sbjct: 93 SHIPKEFDILCAGFPCQAFSIAG 115
>gi|260886138|ref|ZP_05736578.2| modification methylase EcoRII [Prevotella tannerae ATCC 51259]
gi|260850757|gb|EEX70626.1| modification methylase EcoRII [Prevotella tannerae ATCC 51259]
Length = 427
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF G+GG RL L+ C +SSE P + +TY AN+ +
Sbjct: 105 FKFIDLFAGVGGFRLALQ----RIGGRCVYSSEFEPNAQQTYLANYGEMPFGDITKESTK 160
Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83
IP + DVL AGFPCQPFS +G
Sbjct: 161 SYIPDNFDVLCAGFPCQPFSISG 183
>gi|304398880|ref|ZP_07380750.1| DNA-cytosine methyltransferase [Pantoea sp. aB]
gi|304353584|gb|EFM17961.1| DNA-cytosine methyltransferase [Pantoea sp. aB]
Length = 458
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/101 (39%), Positives = 49/101 (48%), Gaps = 23/101 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN DI
Sbjct: 89 FRFIDLFAGIGGIRKGFE----AIGGKCVFTSEWNKEAVRTYKANHYSDPLEHHFNTDIR 144
Query: 58 KIKTQD---------------IPDHDVLLAGFPCQPFSQAG 83
++ + IPDH VLLAGFPCQPFS AG
Sbjct: 145 QVTQPEGLTDDDAIYRAIDAAIPDHQVLLAGFPCQPFSLAG 185
>gi|226223282|ref|YP_002757389.1| type II DNA modification enzyme (methyltransferase) [Listeria
monocytogenes Clip81459]
gi|225875744|emb|CAS04447.1| Putative type II DNA modification enzyme (methyltransferase)
[Listeria monocytogenes serotype 4b str. CLIP 80459]
Length = 389
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 14/97 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNV------ECFFSSEINPYSVKTYQANFPNTLI-F 53
M+++ DLF G GG+ L + + F++E++ ++ + + NFP +
Sbjct: 1 MIRVVDLFSGAGGLTLGFQNRIINNTFLPMSDYNILFANEVDKHASEAFSLNFPQIPMLN 60
Query: 54 GDIAKI-------KTQDIPDHDVLLAGFPCQPFSQAG 83
I ++ + + D+++ G PCQ FS G
Sbjct: 61 CSITELTEDYLDNHEIEYSNIDLVIGGPPCQSFSTVG 97
>gi|119511452|ref|ZP_01630563.1| modification methylase NlaIV [Nodularia spumigena CCY9414]
gi|119463917|gb|EAW44843.1| modification methylase NlaIV [Nodularia spumigena CCY9414]
Length = 433
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
++ DLF GIGGIRL EQ N N+ EC SSEIN + Y+ NF GD+ I
Sbjct: 4 IRFVDLFSGIGGIRLAFEQAANSLNIESECVLSSEINTDAQFVYETNFN-HKSLGDVRLI 62
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +P+H+VLLAGFPCQ FS AG
Sbjct: 63 --EKLPEHEVLLAGFPCQSFSHAG 84
>gi|255591450|ref|XP_002535514.1| cytosine-specific methyltransferase, putative [Ricinus communis]
gi|223522828|gb|EEF26867.1| cytosine-specific methyltransferase, putative [Ricinus communis]
Length = 206
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAK 58
+I DLF GIGGIR+ E +C F+SE N +S KTYQ NF + DI
Sbjct: 29 RIIDLFAGIGGIRMGFE----AHGGQCVFTSEWNDFSQKTYQENFRDGTAQHALIGDIVT 84
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +P+HD+LL GFPCQPFS AG
Sbjct: 85 FPAEAVPEHDILLGGFPCQPFSIAG 109
>gi|157311258|ref|YP_001469302.1| gp69 [Mycobacterium phage Tweety]
gi|148540887|gb|ABQ86138.1| gp69 [Mycobacterium phage Tweety]
Length = 261
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI LF G GG+ + +EQ + E+NP + K +P GDI +
Sbjct: 1 MKIGSLFSGAGGLDIAVEQ---FFGARTVWHCELNPAAAKVLAHRWPGVPNLGDITAVDW 57
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ D+L GFPCQ S AG
Sbjct: 58 STVEPVDILAGGFPCQDVSAAG 79
>gi|315654722|ref|ZP_07907628.1| modification methylase NgoPII [Mobiluncus curtisii ATCC 51333]
gi|315491186|gb|EFU80805.1| modification methylase NgoPII [Mobiluncus curtisii ATCC 51333]
Length = 360
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP------YSVKTYQANFPNTLIFGD 55
+ + LF G GG+ L EQ ++E +P + + +
Sbjct: 6 MNVISLFSGCGGLDLGFEQA----GFNIPVANEFDPTIYETFKANHPHTHLIEGDIRGVT 61
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I I + ++ G PCQ +S+AG
Sbjct: 62 IEDIAPFIDGEVAGIIGGPPCQSWSEAG 89
>gi|307293581|ref|ZP_07573425.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
gi|306879732|gb|EFN10949.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
Length = 418
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI- 59
+K LF G GG E E + E + Y+ TY+ NFP T GDI
Sbjct: 1 MKAVSLFAGCGGFCEGAELA----GFEITVAVEWDKYACMTYRENFPKTPLFEGDIHDFL 56
Query: 60 -------KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D D++ G PCQ FSQ G
Sbjct: 57 KPGSDHETKYKLKDLDLVFGGPPCQGFSQIG 87
>gi|218699478|ref|YP_002407107.1| DNA cytosine methylase [Escherichia coli IAI39]
gi|218369464|emb|CAR17229.1| DNA cytosine methylase [Escherichia coli IAI39]
Length = 472
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
+ DLF GIGGIR E +C F+ E N ++V+TY+AN +
Sbjct: 87 FRFIDLFAGIGGIRRGFE----SIGGQCVFTREWNKHAVRTYKANHYCDPATHHFNEDTR 142
Query: 59 -----------------IKTQDIPDHDVLLAGFPCQPFSQAG 83
Q IP+HDVLLAGFPCQPFS AG
Sbjct: 143 DITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 184
>gi|86360841|ref|YP_472728.1| DNA (cytosine-5-)-methyltransferase protein [Rhizobium etli CFN 42]
gi|86284943|gb|ABC94001.1| probable DNA (cytosine-5-)-methyltransferase protein [Rhizobium
etli CFN 42]
Length = 504
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 18/95 (18%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLF G GGI L + E + E +P + +++ NF + I + T
Sbjct: 22 RVLDLFSGCGGISLGFQSA----GFEIVAAVENDPDAARSHGLNFHHGEDRHSIPRNITV 77
Query: 63 DIP--------------DHDVLLAGFPCQPFSQAG 83
P DV++ G PCQ F++ G
Sbjct: 78 TSPAALATALGLGAAASAFDVIVGGPPCQAFARVG 112
>gi|304390603|ref|ZP_07372556.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326359|gb|EFL93604.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 309
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
L+ DLF G GG+ L E + + E +++ Y+ANF + + D++
Sbjct: 7 LRCVDLFSGCGGMSLGFEMA----GFDVVAAYENWAPALRVYRANFDHPAVEQDLSNVAE 62
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
+++ + D+++ G PCQ FS AG
Sbjct: 63 SVESITQFEPDLVIGGPPCQDFSTAG 88
>gi|300866085|ref|ZP_07110814.1| site-specific DNA-methyltransferase [Oscillatoria sp. PCC 6506]
gi|300335911|emb|CBN55972.1| site-specific DNA-methyltransferase [Oscillatoria sp. PCC 6506]
Length = 436
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--------- 55
D F G GG+ L EQ + S EI+P T+ NFP +F
Sbjct: 13 IDFFAGAGGMTLGFEQA----GFDVLASVEIDPIHCATHNFNFPFWSVFCQSIIDITGAE 68
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + DV+ G PCQ FS G
Sbjct: 69 IRQKSAIGDREIDVVFGGPPCQGFSLIG 96
>gi|322510825|gb|ADX06139.1| putative C-5 cytosine-specific DNA methyltransferase [Organic Lake
phycodnavirus 1]
Length = 390
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 3 KITDLFCGIGGIRLDLEQ---TFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
K DLFCG+G + N C +S+IN V+ GDI KI
Sbjct: 80 KYIDLFCGLGAFHTAFNRNNILQNEVKYTCVLASDINE-CVRKIYEENYGIKPEGDINKI 138
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+PD D+L AGFPCQPFS AG
Sbjct: 139 NIDTMPDFDILCAGFPCQPFSIAG 162
>gi|329769727|ref|ZP_08261128.1| hypothetical protein HMPREF0433_00892 [Gemella sanguinis M325]
gi|328838089|gb|EGF87707.1| hypothetical protein HMPREF0433_00892 [Gemella sanguinis M325]
Length = 406
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+ F G+GGI L E +++EI+ + TY+ NFPN DI ++K
Sbjct: 10 YNVAAFFSGVGGIELGFE---KTNKFRVVYANEIDKNARITYKLNFPNVFLDPRDIHEVK 66
Query: 61 TQDIPDH--DVLLAGFPCQPFSQAG 83
++I + DV++ GFPCQ FS AG
Sbjct: 67 PEEIKEEKLDVIVGGFPCQAFSIAG 91
>gi|309378924|emb|CBX22511.1| putative DNA cytosine methyltransferase [Neisseria lactamica
Y92-1009]
Length = 330
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
+K DLF G GG+ L EQ E + E ++ Y+ NF + + D+
Sbjct: 1 MKCIDLFAGCGGLSLGFEQA----GFEVCAAFEKWDKAIDIYRKNFNHPVYETDLTDEQT 56
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
I D+++ G PCQ FS AG
Sbjct: 57 AISQISNYQPDLIMGGPPCQDFSSAG 82
>gi|308187315|ref|YP_003931446.1| DNA cytosine methylase [Pantoea vagans C9-1]
gi|308057825|gb|ADO09997.1| DNA cytosine methylase [Pantoea vagans C9-1]
Length = 458
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/101 (38%), Positives = 49/101 (48%), Gaps = 23/101 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N +V+TY+AN DI
Sbjct: 89 FRFIDLFAGIGGIRKGFE----AIGGKCVFTSEWNKEAVRTYKANHYSDPLEHHFNTDIR 144
Query: 58 KIKTQD---------------IPDHDVLLAGFPCQPFSQAG 83
++ + +PDH VLLAGFPCQPFS AG
Sbjct: 145 QVTQPEGLTDDEEIYRAIDAAVPDHQVLLAGFPCQPFSLAG 185
>gi|299536257|ref|ZP_07049570.1| DNA-methyltransferase MKpn2kI [Lysinibacillus fusiformis ZC1]
gi|298728243|gb|EFI68805.1| DNA-methyltransferase MKpn2kI [Lysinibacillus fusiformis ZC1]
Length = 403
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/80 (51%), Positives = 54/80 (67%), Gaps = 5/80 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLF GIGGIRL + + C F+SE + ++ KTY+ANF + DI KI ++
Sbjct: 74 MIDLFAGIGGIRLAFQ----SQGGYCCFTSEWDKFAAKTYRANFGDEPNG-DITKINEKE 128
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
IPDH++LLAGFPCQ FSQAG
Sbjct: 129 IPDHNILLAGFPCQAFSQAG 148
>gi|119485563|ref|ZP_01619838.1| modification methylase [Lyngbya sp. PCC 8106]
gi|119456888|gb|EAW38015.1| modification methylase [Lyngbya sp. PCC 8106]
Length = 317
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ DLF G GG+ L L+Q + + ++K YQ NF + + G++ +++T
Sbjct: 1 MRVVDLFAGCGGLSLGLQQA----GFNIVAAFDDWESAIKVYQKNFAHPIFSGNLQEVQT 56
Query: 62 ----QDIPDHDVLLAGFPCQPFSQAG 83
+V++ G PCQ FS AG
Sbjct: 57 AVDLIKPFSPNVIVGGPPCQDFSSAG 82
>gi|29028380|gb|AAO64731.1| EcoT38I methyltransferase [Escherichia coli]
Length = 363
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ LF G GG+ + ++++I+ + T++ N + + GDI ++ +
Sbjct: 4 ISAVSLFTGAGGMDVGFSNA----GFRTVWANDIDKDACDTFKLNHESPVFCGDIDEMLS 59
Query: 62 QDIPDHDV--LLAGFPCQPFSQAG 83
+ ++ + G PCQ FS AG
Sbjct: 60 ELSGLKNIGCVFGGPPCQGFSVAG 83
>gi|119512221|ref|ZP_01631310.1| hypothetical protein N9414_08959 [Nodularia spumigena CCY9414]
gi|119463119|gb|EAW44067.1| hypothetical protein N9414_08959 [Nodularia spumigena CCY9414]
Length = 393
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
DLFCG GGI L Q S EI+P + + GDI +
Sbjct: 60 YTFVDLFCGAGGITQGLSQA----GFTPLASVEISPIASATHKKNFPQCHHFCGDIEQFS 115
Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83
QD P+ +V++ G PCQ FS AG
Sbjct: 116 AQDWLQQIGSPEVNVVVGGPPCQGFSVAG 144
>gi|238765010|ref|ZP_04625947.1| DNA-cytosine methyltransferase [Yersinia kristensenii ATCC 33638]
gi|238696779|gb|EEP89559.1| DNA-cytosine methyltransferase [Yersinia kristensenii ATCC 33638]
Length = 338
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI-AKIK 60
K+ DLFCG GG+ + E + + + ++KTY ANF N + +I I+
Sbjct: 7 FKVIDLFCGAGGLSAGFLKGKQANYFESILAIDNDTAAIKTYNANFGNHGVTANIDEWIE 66
Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81
+IP D+++ G PCQ FS
Sbjct: 67 ENEIPQADLVIGGPPCQGFSL 87
>gi|127435|sp|P25264|MTC2_HERAU RecName: Full=Modification methylase HgiCII; Short=M.HgiCII;
AltName: Full=Cytosine-specific methyltransferase
HgiCII
gi|43464|emb|CAA38935.1| methyltransferase [Herpetosiphon aurantiacus]
Length = 437
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGG RL LE C S+EI+ ++K Y+ N+P ++ I T
Sbjct: 4 FRFIDLFAGIGGFRLGLE----AVGGICVGSAEIDQQAIKVYRQNWPTDRSEHNLGDITT 59
Query: 62 -QDIPDHDVLLAGFPCQPFSQAG 83
Q +P HD+++ G PCQP+S AG
Sbjct: 60 LQQLPAHDLVVGGVPCQPWSIAG 82
>gi|317054725|ref|YP_004103193.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus]
gi|294869157|gb|ADF47149.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus]
Length = 363
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59
M KI DLF G GG+ EQ + + E + + KT+ N P T DI I
Sbjct: 1 MPKIVDLFAGAGGMTEGFEQA----GYQSALAIEYDEMAAKTFSFNHPQTPVFIKDIRTI 56
Query: 60 KTQ------DIPDHDVLLAGFPCQPFSQAG 83
+ + DVL G PCQ FS AG
Sbjct: 57 QEESVREALKYSPIDVLCGGPPCQGFSLAG 86
>gi|213864727|ref|ZP_03386846.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 237
Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|261401478|ref|ZP_05987603.1| modification methylase HindV [Neisseria lactamica ATCC 23970]
gi|269208450|gb|EEZ74905.1| modification methylase HindV [Neisseria lactamica ATCC 23970]
Length = 330
Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
+K DLF G GG+ L EQ E + E ++ Y+ NF + + D+
Sbjct: 1 MKCIDLFAGCGGLSLGFEQA----GFEVCAAFEKWDKAIDIYRKNFNHPVYETDLTDEQT 56
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
I D+++ G PCQ FS AG
Sbjct: 57 AISQISNYQPDLIMGGPPCQDFSSAG 82
>gi|313669224|ref|YP_004049508.1| DNA modification methylase [Neisseria lactamica ST-640]
gi|313006686|emb|CBN88152.1| putative DNA modification methylase [Neisseria lactamica 020-06]
Length = 330
Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
+K DLF G GG+ L EQ E + E ++ Y+ NF + + D+
Sbjct: 1 MKCIDLFAGCGGLSLGFEQA----GFEVCAAFEKWDKAIDIYRKNFNHPVYETDLTDEQT 56
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
I D+++ G PCQ FS AG
Sbjct: 57 AISQISNYQPDLIMGGPPCQDFSSAG 82
>gi|26554428|ref|NP_758362.1| cytosine-specific DNA methylase [Mycoplasma penetrans HF-2]
gi|26454438|dbj|BAC44766.1| cytosine-specific DNA methylase [Mycoplasma penetrans HF-2]
Length = 426
Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFP-NTLIFGDIAK 58
+K DLF GIGG LE+ N EC F SEI+ ++KTY +NF + +I
Sbjct: 4 IKFIDLFAGIGGFHKALERVAKKNNFNIECVFVSEIDNEAIKTYSSNFSVDKEKIINIRD 63
Query: 59 IKT--QDIPDHDVLLAGFPCQPFSQAG 83
+ +PDHD L AGFPCQ FS AG
Sbjct: 64 LDESASQVPDHDFLFAGFPCQTFSNAG 90
>gi|1709158|sp|P50192|MTHA_HAEPH RecName: Full=Modification methylase HphIA; Short=M.HphIA; AltName:
Full=Cytosine-specific methyltransferase HphIA; AltName:
Full=M.Hphi(C)
gi|732729|emb|CAA59690.1| site-specific DNA-methyltransferase (cytosine-specific)
[Haemophilus parahaemolyticus]
Length = 372
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
L DLF G GG L ++ S EI P+ TY+ANFP+ +
Sbjct: 45 LTYIDLFSGAGGFSLGFDRA----GFHQLLSVEIEPHYCDTYRANFPDHQVLQQDLTTLS 100
Query: 57 --AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ + DV++ G PCQ FS AG
Sbjct: 101 DDNLLRHINHRKVDVVIGGPPCQGFSMAG 129
>gi|111220172|ref|YP_710966.1| putative DNA modification methylase [Frankia alni ACN14a]
gi|111147704|emb|CAJ59362.1| putative DNA Modification methylase (Cytosine-specific
methyltransferase) [Frankia alni ACN14a]
Length = 401
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
I DLFCG GG+ L Q + + + S+ T++ANFP + DI +
Sbjct: 56 TIIDLFCGAGGMSLGFVQA----GFSPILAIDHDQPSIDTHRANFPGDSLCVDIRDVS-- 109
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
D P DV++ G PCQ FS+ G
Sbjct: 110 DFPAADVVIGGPPCQGFSRLG 130
>gi|330718183|ref|ZP_08312783.1| cytosine-specific methyltransferase [Leuconostoc fallax KCTC
3537]
Length = 414
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I F G+GGI L E +++E + + T++ NF + + D IK D
Sbjct: 5 IVSFFAGVGGIDLGFEDAGE---YRTVYANEFDKNAQHTFETNFKSRGTYLDRRDIKQVD 61
Query: 64 I-------PDHDVLLAGFPCQPFSQAG 83
P+ VLLAGFPCQPFS AG
Sbjct: 62 AKEVKAKAPNASVLLAGFPCQPFSIAG 88
>gi|261393337|emb|CAX50970.1| putative type II restriction-modification system enzyme Mod
[Neisseria meningitidis 8013]
Length = 330
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
+K DLF G GG+ L EQ E + E ++ Y+ NF + + D+
Sbjct: 1 MKCIDLFAGCGGLSLGFEQA----GFEVCAAFEKWDKAIDIYRKNFNHPVYETDLTDEQT 56
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
I D+++ G PCQ FS AG
Sbjct: 57 AISQISNYQPDLIMGGPPCQDFSSAG 82
>gi|207109252|ref|ZP_03243414.1| putative site-specific DNA-methyltransferase [Helicobacter pylori
HPKX_438_CA4C1]
Length = 210
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L DLF GIGG RL L + ++C FS+E NP+++ Y+ N DI +
Sbjct: 29 LLTYADLFAGIGGFRLAL----DSLGLKCVFSAENNPHAIAMYK-ANFNDDSTCDITILN 83
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+P+ D+L AGFPCQ FS G
Sbjct: 84 PNTMPNFDILCAGFPCQAFSVCG 106
>gi|194335797|ref|YP_002017591.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308274|gb|ACF42974.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 434
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L++ DLF G GG+ F H ++++ N + ++Y ANF + GDI I
Sbjct: 35 LRVIDLFAGAGGLSAGFSHFFGHH-FTPVWANDFNSCAAESYNANFGHHCRVGDIVDILD 93
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQ 81
T IP DV++ G PCQ FS
Sbjct: 94 NPTTIIPKADVVIGGPPCQGFSL 116
>gi|262038316|ref|ZP_06011702.1| modification methylase spri [Leptotrichia goodfellowii F0264]
gi|261747667|gb|EEY35120.1| modification methylase spri [Leptotrichia goodfellowii F0264]
Length = 318
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
D GIGG RL E C EI+ + KTYQ + + +GD+ K+ +
Sbjct: 4 TFFDFCSGIGGGRLGFE----KNGFICVGHCEIDEKADKTYQLFYNDGRNYGDLMKVNPK 59
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
++PD + L+AGFPCQ FS G
Sbjct: 60 ELPDFNYLIAGFPCQTFSIVG 80
>gi|311977245|gb|ADQ20501.1| M2.BfuAI [Lysinibacillus fusiformis]
Length = 342
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIK 60
+K+ DLFCG GG+ L ++ E + + NP + DI ++
Sbjct: 1 MKVVDLFCGAGGLHLGFQEA----GFEIKLAVDSNPIVAKTHEFNFPEIPFFSDDINQLT 56
Query: 61 TQ------DIPDHDVLLAGFPCQPFSQAG 83
+ + DVL+ G PCQ FS G
Sbjct: 57 GFELFNLIEGEEIDVLIGGPPCQGFSTIG 85
>gi|292670064|ref|ZP_06603490.1| modification methylase EcoRII [Selenomonas noxia ATCC 43541]
gi|292648252|gb|EFF66224.1| modification methylase EcoRII [Selenomonas noxia ATCC 43541]
Length = 377
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
+ DLF GIGGIR + F + F SE + ++ KTY+ + I GDI KI
Sbjct: 31 YRSIDLFAGIGGIRKGFDNAFGDA-IRTVFVSEWDEHAQKTYRANYNDSFEIAGDITKIA 89
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
++I D+ LAGFPCQ FS AG
Sbjct: 90 AEEIAPFDICLAGFPCQAFSMAG 112
>gi|229100187|ref|ZP_04231087.1| hypothetical protein bcere0020_53880 [Bacillus cereus Rock3-29]
gi|228683229|gb|EEL37207.1| hypothetical protein bcere0020_53880 [Bacillus cereus Rock3-29]
Length = 306
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
L DLF G+GG RL +EQ C E + ++ K+Y + + DI+ I
Sbjct: 3 LTFIDLFAGLGGFRLGMEQA----GHRCLGYVEWDKFARKSYEAIHDTGEEWTWNDISTI 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
++IP D GFPCQ S G
Sbjct: 59 DYRNIPKSDCWTFGFPCQDISIGG 82
>gi|252957|gb|AAA09969.1| methyltransferase [Herpetosiphon aurantiacus]
Length = 437
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGG RL LE C S+EI+ ++K Y+ N+P ++ I T
Sbjct: 4 FRFIDLFAGIGGFRLGLE----AVGGICVGSAEIDQQAIKVYRQNWPTDRSEHNLGDITT 59
Query: 62 -QDIPDHDVLLAGFPCQPFSQAG 83
Q +P HD+++ G PCQP+S AG
Sbjct: 60 LQQLPAHDLVVGGVPCQPWSIAG 82
>gi|91976449|ref|YP_569108.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB5]
gi|91682905|gb|ABE39207.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB5]
Length = 490
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ LF GIGG E + EI+ + + ++P T +F DI KI
Sbjct: 27 LRVASLFAGIGGFDKAFE----SVSASVVAQCEIDSFCRAVLRRHWPQTKLFEDITKINP 82
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
+ P D+ AGFPCQ S A
Sbjct: 83 AEFPAADIWTAGFPCQDVSLA 103
>gi|332655061|ref|ZP_08420802.1| modification methylase NgoFVII
(Cytosine-specificmethyltransferase NgoFVII)
(M.NgoFVII) (M.NgoVII) [Ruminococcaceae bacterium D16]
gi|332515921|gb|EGJ45530.1| modification methylase NgoFVII
(Cytosine-specificmethyltransferase NgoFVII)
(M.NgoFVII) (M.NgoVII) [Ruminococcaceae bacterium D16]
Length = 369
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ +F G GG+ L ++++ ++VK+++ANF + + + DI KI
Sbjct: 12 KVVSIFSGCGGLDLGFHM----EGYNTIWANDFAEWAVKSFRANFGDVIKYEDITKINPY 67
Query: 63 DI---PDHDVLLAGFPCQPFSQ 81
+ P+ D++L GFPCQ FS
Sbjct: 68 EDKSIPECDLVLGGFPCQDFSI 89
>gi|317048624|ref|YP_004116272.1| DNA-cytosine methyltransferase [Pantoea sp. At-9b]
gi|316950241|gb|ADU69716.1| DNA-cytosine methyltransferase [Pantoea sp. At-9b]
Length = 467
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/101 (39%), Positives = 48/101 (47%), Gaps = 23/101 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
+ DLF GIGGIR EQ +C F+SE N +V+TY+AN
Sbjct: 93 FQFVDLFAGIGGIRRGFEQ----IGGQCVFTSEWNKEAVRTYKANHYCDPQQHRFNSDIR 148
Query: 56 -------------IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + IPDH VLLAGFPCQPFS AG
Sbjct: 149 QVTQPAGLHDEQAIYQHIDRTIPDHQVLLAGFPCQPFSLAG 189
>gi|166363188|ref|YP_001655461.1| cytosine-specific DNA methylase [Microcystis aeruginosa NIES-843]
gi|166085561|dbj|BAG00269.1| cytosine-specific DNA methylase [Microcystis aeruginosa NIES-843]
Length = 387
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
DLF G GGI L Q S+EI+P + + GDI
Sbjct: 59 YNFIDLFSGAGGITQGLLQA----GFNPVASAEISPIASATHQKNFPNCHHFCGDIHDFN 114
Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83
TQ+ P +++ G PCQ FS AG
Sbjct: 115 TQEWLAKIGNPFIHLVVGGPPCQGFSVAG 143
>gi|322510834|gb|ADX06148.1| putative C-5 cytosine-specific DNA methyltransferase [Organic Lake
phycodnavirus 1]
Length = 344
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K DLFCGIG +F +C S +I+ +VK + L GDI +I+
Sbjct: 69 IKFIDLFCGIG----SFHYSFKKLGWDCVMSCDIDK-AVKETYKSNYGILPLGDITEIEP 123
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++I ++D+L AGFPCQPFSQ G
Sbjct: 124 KNITNYDILCAGFPCQPFSQCG 145
>gi|229133328|ref|ZP_04262157.1| Modification methylase Sau3AI [Bacillus cereus BDRD-ST196]
gi|228650144|gb|EEL06150.1| Modification methylase Sau3AI [Bacillus cereus BDRD-ST196]
Length = 413
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-------YSVKTYQANFPNTLIF 53
M+ + +LF G+GG R+ LE+ + + + ++ P + +
Sbjct: 1 MINVIELFAGVGGFRIGLEKMNH---FQVVWGNQWEPSKKAQDAFHCYAQRFQDKGIHCN 57
Query: 54 GDIAKIKTQDIPDH--DVLLAGFPCQPFSQA 82
DIA + ++I D+++ GFPCQ +S A
Sbjct: 58 QDIATVTDEEIQKIDADMIVGGFPCQDYSVA 88
>gi|307155289|ref|YP_003890673.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306985517|gb|ADN17398.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 387
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
DLF G GGI Q ++ S EINP + TY NFP F
Sbjct: 70 YTFVDLFAGAGGITQGFVQA----GLKPIASLEINPIASATYVKNFPQCHHFCGDIAEFL 125
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + P+ +++ G PCQ FS AG
Sbjct: 126 PINWLNQIGSPEIHLVVGGPPCQGFSVAG 154
>gi|172038906|ref|YP_001805407.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142]
gi|171700360|gb|ACB53341.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142]
Length = 427
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---------D 55
DLF G+GG+ L EQ + S E++P ++ NFP
Sbjct: 9 VDLFAGVGGMTLGFEQA----GFDVLASVELDPIHCSIHRYNFPFWTTICASVTRITANQ 64
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I ++ + DV+ G PCQ FS G
Sbjct: 65 IRELSSIQNQPIDVVFGGPPCQGFSLMG 92
>gi|284052894|ref|ZP_06383104.1| DNA-cytosine methyltransferase [Arthrospira platensis str.
Paraca]
gi|79835469|gb|ABB52095.1| Mod [Arthrospira platensis]
gi|291565921|dbj|BAI88193.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
Length = 314
Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
++ DLF G GG+ L + + + EI ++K YQ NF + + D++K
Sbjct: 1 MRTIDLFAGCGGLSLGFQNA----GFDMKAAFEIWKPAIKVYQRNFSHPIFQVDLSKESV 56
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
I T +V++ G PCQ FS AG
Sbjct: 57 INTLGEWKPEVIIGGPPCQDFSSAG 81
>gi|206600250|ref|YP_002241856.1| gp69 [Mycobacterium phage Ramsey]
gi|206287338|gb|ACI12681.1| gp69 [Mycobacterium phage Ramsey]
Length = 447
Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI LF G GG+ + +EQ + E+NP + K +P GDI +
Sbjct: 1 MKIGSLFSGAGGLDIAVEQ---FFGARTVWHCELNPDASKVLAHRWPGVPNLGDITAVDW 57
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ D+L GFPCQ S AG
Sbjct: 58 STVEPVDILAGGFPCQDVSAAG 79
>gi|119511191|ref|ZP_01630308.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414]
gi|119464179|gb|EAW45099.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414]
Length = 432
Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---------D 55
DLF G GG+ L EQ + S EI+P T++ NFP + +
Sbjct: 9 VDLFAGAGGMTLGFEQA----GFDVLASVEIDPIHCATHEFNFPFWRVLCKPVEETTSQE 64
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + + DV+ G PCQ FS G
Sbjct: 65 IRQSSSIGDREIDVVFGGPPCQGFSLIG 92
>gi|46191283|ref|ZP_00120453.2| COG0270: Site-specific DNA methylase [Bifidobacterium longum
DJO10A]
Length = 315
Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKTQDIP 65
+F GIGGIR+ + Q +SSE N YS + GDI K+ D+P
Sbjct: 1 MFAGIGGIRMGMVQALGDA-AHVVYSSEWNKYSVQTYEANWHDENPVAGDITKVDEHDVP 59
Query: 66 DHDVLLAGFPCQPFSQAG 83
D D+LLAGFPCQPFS AG
Sbjct: 60 DIDLLLAGFPCQPFSIAG 77
>gi|17229768|ref|NP_486316.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
gi|17131367|dbj|BAB73975.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
Length = 431
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---------D 55
DLF G GG+ L EQ + + EI+P ++ NFP + +
Sbjct: 20 VDLFAGAGGMSLGFEQA----GFDVLAAVEIDPIHCAVHEYNFPFCSVLCKSVEETTGKE 75
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + DV++ G PCQ FS G
Sbjct: 76 IRDRSKINNQEIDVIICGSPCQGFSLMG 103
>gi|270157659|ref|ZP_06186316.1| DNA-cytosine methyltransferase family protein [Legionella
longbeachae D-4968]
gi|269989684|gb|EEZ95938.1| DNA-cytosine methyltransferase family protein [Legionella
longbeachae D-4968]
Length = 414
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K+ +LF G GG+ L + C EI+ + V+T + N P+ + D
Sbjct: 81 FKVVELFAGAGGLALGFHNA----GLNCELLVEIDKFPVETLRKNCPSWNVICDDIANVN 136
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D++ GFPCQ FS AG
Sbjct: 137 FRGVKADIVAGGFPCQAFSYAG 158
>gi|150024829|ref|YP_001295655.1| modification methyltransferase Sau3AI [Flavobacterium psychrophilum
JIP02/86]
gi|149771370|emb|CAL42839.1| Probable modification methyltransferase Sau3AI [Flavobacterium
psychrophilum JIP02/86]
Length = 431
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 17/98 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN-----------HRNVECFFSSEINPY------SVKTYQ 44
+K+ +LF G+GG RL LE N + E +S++ P S+
Sbjct: 5 IKVVELFAGVGGFRLGLEGWNNKSASSNYKENFESSYEIVWSNQWEPSTKVQHASMVYET 64
Query: 45 ANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
DI+ ++ IPDHD+L+ GFPCQ +S A
Sbjct: 65 RWDKKNHCNQDISTVEVDIIPDHDLLVGGFPCQDYSVA 102
>gi|217033040|ref|ZP_03438509.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128]
gi|298736593|ref|YP_003729119.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945239|gb|EEC23921.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128]
gi|298355783|emb|CBI66655.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 351
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN DI ++
Sbjct: 1 MYKVADIFCGAGGLSYGFS---KHPYFELIWANDIDKDAILSYQANHKEAQTILCDIVQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P ++LL G PCQ +S G
Sbjct: 58 HCHNLPCVSINILLGGPPCQSYSTLG 83
>gi|327394286|dbj|BAK11708.1| modification methylase EcoRII [Pantoea ananatis AJ13355]
Length = 459
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 47/101 (46%), Gaps = 23/101 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
+ DLF GIGGIR E +C F+SE N +++TY+AN +
Sbjct: 89 FRFIDLFAGIGGIRRGFE----RIGGKCVFTSEWNKEAIRTYRANHYSDPAEHHFNTDIR 144
Query: 56 -------------IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + IPDH VLLAGFPCQPFS AG
Sbjct: 145 QVTQPAGLTDEQAIYQSIDAAIPDHQVLLAGFPCQPFSLAG 185
>gi|291617874|ref|YP_003520616.1| EcoRIIM [Pantoea ananatis LMG 20103]
gi|291152904|gb|ADD77488.1| EcoRIIM [Pantoea ananatis LMG 20103]
Length = 459
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 47/101 (46%), Gaps = 23/101 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
+ DLF GIGGIR E +C F+SE N +++TY+AN +
Sbjct: 89 FRFIDLFAGIGGIRRGFE----RIGGKCVFTSEWNKEAIRTYRANHYSDPAEHHFNTDIR 144
Query: 56 -------------IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + IPDH VLLAGFPCQPFS AG
Sbjct: 145 QVTQPAGLTDEQAIYQSIDAAIPDHQVLLAGFPCQPFSLAG 185
>gi|14520267|ref|NP_125742.1| modification methylase [Pyrococcus abyssi GE5]
gi|5457482|emb|CAB48973.1| Citosine-specific modificatrion methylase [Pyrococcus abyssi GE5]
Length = 309
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIK 60
+K+ DLF G GG L E + E P + +I DI I
Sbjct: 8 MKVLDLFAGAGGFSLGF----KLVGFEIVAAIENFKPKAKTYSHNFPGVKVIAQDIKVIS 63
Query: 61 TQDIPDHDVLLAGFPCQPFS 80
+I D DV++ G PC+PF+
Sbjct: 64 PDEIGDVDVIIGGPPCEPFT 83
>gi|194017229|ref|ZP_03055841.1| site-specific DNA-methyltransferase [Bacillus pumilus ATCC 7061]
gi|194011097|gb|EDW20667.1| site-specific DNA-methyltransferase [Bacillus pumilus ATCC 7061]
Length = 327
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K +LF GIGGI L E +E E PY K NFPN +F D+ +
Sbjct: 1 MKSIELFAGIGGIALAAEWA----GIETVAFCEREPYCQKLLNQNFPNVPVFDDVRTLNR 56
Query: 62 Q---------DIPDHDVLLAGFPCQPFSQAG 83
Q D++ GFPCQP+S AG
Sbjct: 57 QLLEDKGVIEPNGTIDIISGGFPCQPYSSAG 87
>gi|52841468|ref|YP_095267.1| modification methylase (Eco47II, Sau96I) [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|52628579|gb|AAU27320.1| modification methylase (Eco47II, Sau96I) [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
Length = 416
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K+ +LF G GG+ L ++C EI+ V+T + N P+ + D
Sbjct: 81 FKVVELFAGAGGLALGFHNA----GLDCSMLVEIDKNPVETLRHNCPSWNVIHDDIANVD 136
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DV+ GFPCQ FS AG
Sbjct: 137 FQGITADVVAGGFPCQAFSYAG 158
>gi|296330570|ref|ZP_06873048.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305674618|ref|YP_003866290.1| putative C-5 cytosine-specific DNA methylase [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296152252|gb|EFG93123.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305412862|gb|ADM37981.1| putative C-5 cytosine-specific DNA methylase [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 298
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K +LF GIGGI L E +E E P+ K NF IF D+ +
Sbjct: 1 MKSIELFAGIGGIALAAEWA----GIETVAFCEREPFCQKVLNKNFRGVPIFDDVRTLNR 56
Query: 62 Q---------DIPDHDVLLAGFPCQPFSQAG 83
Q D++ GFPCQP+S AG
Sbjct: 57 QLLEEKGVIEPGGTIDIISGGFPCQPYSIAG 87
>gi|148555377|ref|YP_001262959.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1]
gi|148500567|gb|ABQ68821.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1]
Length = 412
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK LF GIGG+ E + + EI+ S + N +I DI + T
Sbjct: 9 LKAISLFTGIGGLDFGFEAA----GFDTAVALEIDKASCRVLGDNRDWPIIGEDIHDVGT 64
Query: 62 Q--------DIPDHDVLLAGFPCQPFSQAG 83
++ + D+L+ G PCQPFS++G
Sbjct: 65 PRLLQAANLEVGEADILIGGPPCQPFSKSG 94
>gi|154497795|ref|ZP_02036173.1| hypothetical protein BACCAP_01773 [Bacteroides capillosus ATCC
29799]
gi|150273293|gb|EDN00438.1| hypothetical protein BACCAP_01773 [Bacteroides capillosus ATCC
29799]
Length = 222
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS---VKTYQANFPNTLIFGDIAKIKTQD 63
+F GIGG R L + +C EI+ Y+ + + D +I D
Sbjct: 1 MFAGIGGFRAGLARAG---GFQCVGHCEIDKYADASYRAIHDIREEERYYPDAREIDPGD 57
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
+PD D+L GFPCQ FS AG
Sbjct: 58 LPDFDLLCGGFPCQAFSLAG 77
>gi|291525775|emb|CBK91362.1| DNA-methyltransferase (dcm) [Eubacterium rectale DSM 17629]
Length = 510
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK+ LF GIGG L ++ ++SEI+P+ + FP GDI K+
Sbjct: 4 LKLGSLFDGIGGFPLAATM----NDIRPVWASEIDPFPMAVTAYRFPEMKHMGDITKLHG 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++P DV+ G PCQ S AG
Sbjct: 60 ANLPVVDVIAGGSPCQDLSVAG 81
>gi|16923911|gb|AAL31632.1|AF438204_2 C5 DNA methyltransferase [Positive selection vector pMTet1]
Length = 418
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGGIR E +C FSSEI+P++ TY NF + FGDI K++
Sbjct: 105 FKFIDLFSGIGGIRQSFEV----NGGKCVFSSEIDPFAKFTYYTNFG-VVPFGDITKVEA 159
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP+HD+L AGFP QP+S G
Sbjct: 160 TTIPEHDILCAGFPGQPWSHMG 181
>gi|49476998|ref|YP_035184.1| modification methylase HpaII (cytosine-specific methyltransferase
HpaII) [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49328554|gb|AAT59200.1| modification methylase HpaII (Cytosine-specific methyltransferase
HpaII) [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 373
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59
K DLF GIGGIR E T E S+EI+ Y+ +TY+ +
Sbjct: 3 YKTLDLFAGIGGIRRGFELTGR---FENVLSAEIDQYACQTYEHLYSENPKNDVTSAEFK 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ + +DVLL GFPCQ FS AG
Sbjct: 60 EKVEKLTYDVLLGGFPCQAFSTAG 83
>gi|325971313|ref|YP_004247504.1| DNA-cytosine methyltransferase [Spirochaeta sp. Buddy]
gi|324026551|gb|ADY13310.1| DNA-cytosine methyltransferase [Spirochaeta sp. Buddy]
Length = 516
Score = 77.7 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
++ DLF G GG+ + N + E N Y+ +T + N T + D+
Sbjct: 3 YRVLDLFAGAGGLSQGFKNAG---NFSIAVAIENNKYAQETCRENHKETTMLSDVLDYSD 59
Query: 60 ---KTQDIPDHDVLLAGFPCQPFSQA 82
+ DV++ G PCQ FS A
Sbjct: 60 FSDFKTKYGEFDVVIGGPPCQGFSNA 85
>gi|326204903|ref|ZP_08194756.1| DNA-cytosine methyltransferase [Clostridium papyrosolvens DSM
2782]
gi|325984952|gb|EGD45795.1| DNA-cytosine methyltransferase [Clostridium papyrosolvens DSM
2782]
Length = 569
Score = 77.7 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + ++SEI + + + FP L GDI K+K
Sbjct: 5 ITVGSLFDGIGGFP----MAGIRQGFIPVWASEIEAFPIAVTKLRFPQMLHVGDITKLKG 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ +P DV+ G PCQ S AG
Sbjct: 61 ETLPQVDVVCGGSPCQDLSVAG 82
>gi|197302809|ref|ZP_03167861.1| hypothetical protein RUMLAC_01538 [Ruminococcus lactaris ATCC
29176]
gi|197298046|gb|EDY32594.1| hypothetical protein RUMLAC_01538 [Ruminococcus lactaris ATCC
29176]
Length = 333
Score = 77.7 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF G+GG R+ LE +C +S+E N V+ A+ + GDI ++
Sbjct: 12 YSFIDLFAGLGGFRIALE----SLGAKCVYSNEWN-VPVQKVYADNFGDIPEGDITQVDE 66
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IPDHD+L AGFPCQ FS +G
Sbjct: 67 NTIPDHDILCAGFPCQAFSISG 88
>gi|161789274|ref|YP_001595753.1| methyl transferase [Vibrio sp. 09022]
gi|161761495|gb|ABX77139.1| methyl transferase [Vibrio sp. 09022]
Length = 421
Score = 77.7 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K F G G+ L LE E + EI+ +T + N P + GDI
Sbjct: 1 MKYLSFFSGALGLDLGLESA----GFEPLLACEIDKDCKETIKTNKPELPVIGDIRDYTA 56
Query: 62 QD---------IPDHDVLLAGFPCQPFSQAG 83
Q + D+++ G PCQ FS AG
Sbjct: 57 QQIREIAGLTQDEEVDLVVGGPPCQAFSTAG 87
>gi|4033737|gb|AAC97190.1| modification methylase M.NspI [Nostoc sp. PCC 7524]
Length = 397
Score = 77.7 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
DLFCG GGI L Q + S EI+P + + +GDI +
Sbjct: 60 YTFVDLFCGAGGITQGLVQA----GFQALASVEISPIASATHQRNFPHCHHFWGDIEQFY 115
Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83
+ P+ ++++ G PCQ FS AG
Sbjct: 116 PKSWLQQIGYPEVNLVVGGPPCQGFSVAG 144
>gi|113971536|ref|YP_735329.1| DNA-cytosine methyltransferase [Shewanella sp. MR-4]
gi|113886220|gb|ABI40272.1| DNA-cytosine methyltransferase [Shewanella sp. MR-4]
Length = 417
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--------PNTLIF 53
K DLF GIGG L L + + FSSE + + TY N+
Sbjct: 82 FKFIDLFAGIGGFNLALT----SQGGKAVFSSEWDKSAKITYFNNYGKTPFGDINQFTAQ 137
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
G + IPDHDVL GFPCQPFS AG
Sbjct: 138 GVSNEFIETMIPDHDVLAGGFPCQPFSHAG 167
>gi|110643909|ref|YP_671639.1| putative type II 5-cytosoine methyltransferase [Escherichia coli
536]
gi|110345501|gb|ABG71738.1| putative type II 5-cytosoine methyltransferase [Escherichia coli
536]
Length = 305
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66
+F G GG+ L L+Q+ ++ ++++I +V TY+ N ++ GDIA I + DIP+
Sbjct: 1 MFSGAGGLDLGLKQS----GLDIIWANDIYEDAVDTYKRNIGEHIVLGDIANINSSDIPN 56
Query: 67 HDVLLAGFPCQPFSQA 82
DV++ GFPCQ FS A
Sbjct: 57 CDVVVGGFPCQGFSVA 72
>gi|157164649|ref|YP_001466261.1| putative two-component sensor [Campylobacter concisus 13826]
gi|112801493|gb|EAT98837.1| modification methylase HphIA (Cytosine-specificmethyltransferase
HphIA) (M.HphIA) (M.Hphi(C)) [Campylobacter concisus
13826]
Length = 489
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 12/88 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----- 57
I DLFCG GG +++I+ +++TY N P I
Sbjct: 117 TIIDLFCGAGGFSYGFS----KMGYNILLANDIDKDALRTYSFNHPEINSSRIINDDVKL 172
Query: 58 ---KIKTQDIPDHDVLLAGFPCQPFSQA 82
I D+++ G PCQ FS A
Sbjct: 173 ISQNIHKYVNLQVDMIIGGPPCQSFSSA 200
>gi|323487868|ref|ZP_08093126.1| type II modification methyltransferase [Planococcus donghaensis
MPA1U2]
gi|323398602|gb|EGA91390.1| type II modification methyltransferase [Planococcus donghaensis
MPA1U2]
Length = 420
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L++ +LF G+GG RL L++ + + + ++ P + + I
Sbjct: 7 LRVIELFAGVGGFRLGLQKANHEL-FDIVWGNQWEPSRKAQDAFDCYSRNFDTGIHSNED 65
Query: 60 ------KTQDIPDHDVLLAGFPCQPFSQA 82
T D+L+ GFPCQ +S A
Sbjct: 66 ITKVSDDTFHDLRADLLVGGFPCQDYSVA 94
>gi|170718974|ref|YP_001784137.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336]
gi|168827103|gb|ACA32474.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336]
Length = 323
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK D GIGG RL LE +EC SE++P TYQ F + +GD+ KI
Sbjct: 7 LKFMDFCSGIGGGRLGLE----LNGMECIAHSELDPNPDLTYQLFFNDKNNYGDLTKINI 62
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+P+ DV+LAGFPCQ FS G
Sbjct: 63 NDLPEFDVMLAGFPCQTFSIVG 84
>gi|183983894|ref|YP_001852185.1| phage DNA methylase [Mycobacterium marinum M]
gi|183177220|gb|ACC42330.1| conserved hypothetical phage DNA methylase [Mycobacterium marinum
M]
Length = 291
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++I LF G GG+ L +E F + E +P + K ++P GD+ +I
Sbjct: 4 MRIGSLFSGAGGLDLAVEHIF---GATVAWHCENDPAASKVLAHHWPGVPNLGDVTEIDW 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ D+L G+PCQPFS AG
Sbjct: 61 AQVEPVDILCGGWPCQPFSLAG 82
>gi|291087089|ref|ZP_06345376.2| modification methylase HpaII [Clostridium sp. M62/1]
gi|291076158|gb|EFE13522.1| modification methylase HpaII [Clostridium sp. M62/1]
Length = 490
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59
++ DL GIGGIR E + E S+EI+ Y+ +TY+ F + +
Sbjct: 20 MRTIDLCSGIGGIRRGFELAGD---FENVLSAEIDKYACQTYEHLFGDDARNDVTNDEFR 76
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K D+DVLLAGFPCQPFS+ G
Sbjct: 77 KLVCRTDYDVLLAGFPCQPFSKIG 100
>gi|329298618|ref|ZP_08255954.1| DNA cytosine methylase [Plautia stali symbiont]
Length = 465
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/101 (40%), Positives = 49/101 (48%), Gaps = 23/101 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
+ DLF GIGGIR EQ +C F+SE N +V+TY+AN +
Sbjct: 91 FQFIDLFAGIGGIRRGFEQ----IGGQCVFTSEWNKEAVRTYKANHYSDPAQHQFNSDIR 146
Query: 56 -------------IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + Q IPDH VLLAGFPCQPFS AG
Sbjct: 147 LITQPAGLPDEQAIYQHIDQTIPDHQVLLAGFPCQPFSLAG 187
>gi|8489198|gb|AAF75616.1|AF216814_7 5-methylcytosine methyltransferase [Lactococcus lactis subsp.
lactis bv. diacetylactis]
gi|3702801|gb|AAC77904.1| LlaKR2I methylase enzyme [Lactococcus lactis]
Length = 420
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55
+K+ +LF G+GG R+ LE + + +S++ P +
Sbjct: 1 MKVLELFAGVGGFRIGLENADKNL-FKTKWSNQWEPSRKSQDAFEVYDYHFPNSENINIS 59
Query: 56 IAKIKTQDI--PDHDVLLAGFPCQPFSQA 82
I+ I + D D+++ GFPCQ +S A
Sbjct: 60 ISDIPDEKFAEMDADIIVGGFPCQDYSVA 88
>gi|327399867|ref|YP_004346898.1| cytosine-specific methyltransferase [Lactobacillus amylovorus GRL
1112]
gi|327182537|gb|AEA32972.1| cytosine-specific methyltransferase [Lactobacillus amylovorus GRL
1112]
Length = 401
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIP 65
F G+GGI L +QT +++E + + KTY N P T DI +K+ +IP
Sbjct: 15 FFAGVGGIELGFKQTGE---FRVVYANEFDKNARKTYAENNPETPLDGRDIHDVKSDEIP 71
Query: 66 DHDVLLAGFPCQPFSQAG 83
D +V++ GFPCQ FS AG
Sbjct: 72 DSNVIMGGFPCQAFSIAG 89
>gi|317473510|ref|ZP_07932802.1| C-5 cytosine-specific DNA methylase [Anaerostipes sp. 3_2_56FAA]
gi|316899021|gb|EFV21043.1| C-5 cytosine-specific DNA methylase [Anaerostipes sp. 3_2_56FAA]
Length = 385
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF G GG+ L + + E + K Y+ NF + + D++ +K+
Sbjct: 1 MNTVDLFAGCGGMSLGFQNA----GFNLVAAFEFWDIAAKCYEENFNHPVFKSDLSNVKS 56
Query: 62 ----QDIPDHDVLLAGFPCQPFSQAG 83
++++ G PCQ FS AG
Sbjct: 57 AVEQIRRFSPELIIGGPPCQDFSHAG 82
>gi|261837889|gb|ACX97655.1| type II m5C methylase [Helicobacter pylori 51]
Length = 348
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T DI ++
Sbjct: 1 MYKVADIFCGAGGLSYGFSM---HPYFELIWANDIDNDAILSYQANHKETQTILCDIMQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 DCHNLPCVSIDILLGGPPCQSYSTLG 83
>gi|323512819|gb|ADX88273.1| putative DNA-methyltransferase, type II restriction-modification
system (Enterobacteria phage RB16) [Vibrio phage
ICP1_2006_D]
gi|323513047|gb|ADX88500.1| putative DNA-methyltransferase, type II restriction-modification
system (Enterobacteria phage RB16) [Vibrio phage
ICP1_2006_C]
Length = 332
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF G+ R+ LE+ +++SEI+ ++K QAN+P+ + GD+ K +
Sbjct: 1 MNVLSLFDGMACCRIALERAGIQVG--NYYASEIDKNAIKVAQANWPDNIQLGDVTKWQE 58
Query: 62 Q--DIPDHDVLLAGFPCQPFSQAG 83
D D++ GFPCQ +S AG
Sbjct: 59 WGIDWASIDLVTGGFPCQAWSIAG 82
>gi|308389149|gb|ADO31469.1| Cytosine-specific methyltransferase NlaX [Neisseria meningitidis
alpha710]
Length = 275
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ LF GIGG L EQ + + EI+ + FP+ F D+
Sbjct: 5 TVGSLFAGIGGFDLGFEQA----GFQTAWQVEIDEVNRAVLADRFPHARQFADVRTALP- 59
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
D+ DV++ GFPCQ S AG
Sbjct: 60 DLWSVDVIVGGFPCQDVSTAG 80
>gi|225158172|ref|ZP_03725067.1| DNA methyltransferase [Opitutaceae bacterium TAV2]
gi|224802676|gb|EEG20930.1| DNA methyltransferase [Opitutaceae bacterium TAV2]
Length = 414
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
LF GIGG L ++ + + EI+ + FP F DI ++
Sbjct: 16 TFGSLFAGIGGFDLGFKRAGMNDCWQI----EIDENCRDLLRRRFPTCEKFADIREVDVS 71
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ DV+ GFPCQ S AG
Sbjct: 72 TLAPVDVICGGFPCQDLSVAG 92
>gi|237742049|ref|ZP_04572530.1| modification methylase HpaII [Fusobacterium sp. 4_1_13]
gi|229429697|gb|EEO39909.1| modification methylase HpaII [Fusobacterium sp. 4_1_13]
Length = 385
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59
K DLF GIGGIR E T E S+EI+ Y+ +TY+ F
Sbjct: 7 YKTIDLFSGIGGIRKGFELTGF---FENIISAEIDKYACETYKHLFNENPFNDVSSEEFK 63
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++D+LLAGFPCQ FS AG
Sbjct: 64 IKLESLEYDILLAGFPCQSFSIAG 87
>gi|327463103|gb|EGF09424.1| modification methylase ScrFIA [Streptococcus sanguinis SK1]
Length = 346
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
LKI LF G GG + F+ + +E ++++I+ + K ++ NF T
Sbjct: 4 LKIASLFSGGGGTDIGFAGGFDFLDQHYADNQIEIVYANDIDDSANKMFEKNFGITPDNR 63
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
++ ++K+ +IP D+L GFPCQ FS
Sbjct: 64 NVREVKSNEIPSFDILTGGFPCQSFSV 90
>gi|310819714|ref|YP_003952072.1| cytosine-specific methyltransferase [Stigmatella aurantiaca
DW4/3-1]
gi|309392786|gb|ADO70245.1| Cytosine-specific methyltransferase [Stigmatella aurantiaca
DW4/3-1]
Length = 421
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIKT 61
K+ LF G GG+ E E + E++ +T + T++ DI K++
Sbjct: 5 KVISLFSGAGGLDYGFEAA----GFETAVALEMDHACCETLRENRPSWTVMETDILKVRG 60
Query: 62 QD--------IPDHDVLLAGFPCQPFSQAG 83
+D I + DVL+ G PCQPFS+AG
Sbjct: 61 KDVLKAAGLKIGEADVLIGGPPCQPFSKAG 90
>gi|309379756|emb|CBX21532.1| putative DNA cytosine methyltransferase M.NlaII [Neisseria
lactamica Y92-1009]
Length = 419
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55
+K+ +LF G+GG R+ LE E ++++ P +
Sbjct: 1 MKVLELFAGVGGFRIGLENANKDL-FETKWANQWEPSRKSQDAFEVYDYHFPNSENINIS 59
Query: 56 IAKIKTQDI--PDHDVLLAGFPCQPFSQA 82
IA I + D D+++ GFPCQ +S A
Sbjct: 60 IADITNEKFSEMDADMIVGGFPCQDYSVA 88
>gi|288801979|ref|ZP_06407420.1| modification methylase HaeIII (Cytosine-specific
methyltransferase HaeIII) [Prevotella melaninogenica
D18]
gi|288335414|gb|EFC73848.1| modification methylase HaeIII (Cytosine-specific
methyltransferase HaeIII) [Prevotella melaninogenica
D18]
Length = 336
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+++ LF G GG+ ++E + T++ANFP+T I GDI I
Sbjct: 1 MRLISLFSGAGGLDKGFHNA----GFRTIVANEFDKKICPTFRANFPDTKLIEGDIHDIP 56
Query: 61 TQDIPDHDV-LLAGFPCQPFSQAG 83
+ P + V ++ G PCQ +S+AG
Sbjct: 57 SDAFPMNPVGIIGGPPCQSWSEAG 80
>gi|261400519|ref|ZP_05986644.1| modification methylase Sau3AI [Neisseria lactamica ATCC 23970]
gi|269209782|gb|EEZ76237.1| modification methylase Sau3AI [Neisseria lactamica ATCC 23970]
Length = 383
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55
+K+ +LF G+GG R+ LE E ++++ P +
Sbjct: 1 MKVLELFAGVGGFRIGLENANKDL-FETKWANQWEPSRKSQDAFEVYDYHFPNSENINIS 59
Query: 56 IAKIKTQDI--PDHDVLLAGFPCQPFSQA 82
IA I + D D+++ GFPCQ +S A
Sbjct: 60 IADITNEKFSEMDADMIVGGFPCQDYSVA 88
>gi|145629544|ref|ZP_01785342.1| condesin subunit E [Haemophilus influenzae 22.1-21]
gi|144978387|gb|EDJ88151.1| condesin subunit E [Haemophilus influenzae 22.1-21]
Length = 95
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K DLF GIGGIRL E + FSSE + Y+ Y+ NF DI I
Sbjct: 4 YKTIDLFAGIGGIRLGFE----AFGCKNVFSSEWDKYAQSMYEVNFGEKPFG-DINDISP 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+LLAGFPCQPFS AG
Sbjct: 59 SDIPDHDILLAGFPCQPFSIAG 80
>gi|288929280|ref|ZP_06423125.1| modification methylase HphIA (Cytosine-specific methyltransferase
HphIA) [Prevotella sp. oral taxon 317 str. F0108]
gi|288329382|gb|EFC67968.1| modification methylase HphIA (Cytosine-specific methyltransferase
HphIA) [Prevotella sp. oral taxon 317 str. F0108]
Length = 370
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----IAKI 59
+ DLF G GG + E+ + EI+ TY N N L+ D +
Sbjct: 6 VIDLFAGCGGFSIGFEKA----GFHVTKAVEIDKQIAHTYSMNHANVLMLNDDIGSVDNE 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +V++ G PCQ FS AG
Sbjct: 62 YNFTRGEAEVIVGGPPCQGFSMAG 85
>gi|163937935|ref|YP_001642821.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis
KBAB4]
gi|163865790|gb|ABY46846.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis
KBAB4]
Length = 444
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K LF GIGG EQ N + C +SE++ Y+ T GDI K+++
Sbjct: 9 FKYVSLFSGIGGF----EQALNGKGGICVMASEVDKYA-NTAYELIYGKKTVGDITKVRS 63
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+P HD+L AGFPC FS AG
Sbjct: 64 MDVPRHDILTAGFPCPTFSVAG 85
>gi|159037548|ref|YP_001536801.1| C-5 cytosine-specific DNA methylase [Salinispora arenicola
CNS-205]
gi|157916383|gb|ABV97810.1| C-5 cytosine-specific DNA methylase [Salinispora arenicola
CNS-205]
Length = 98
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
L + DLF GIGG+ L L++ + EINPY ++P D+
Sbjct: 6 LHVLDLFAGIGGLSLGLQRA----GMRIVGHVEINPYCRAVLARHWPEVSCHDDVRTAAA 61
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ D P DV+ G+PCQP S AG
Sbjct: 62 WWRSTDRPRVDVVAGGYPCQPESLAG 87
>gi|157826842|ref|YP_001495906.1| cytosine-C5 specific DNA methylase [Rickettsia bellii OSU 85-389]
gi|157802146|gb|ABV78869.1| Cytosine-C5 specific DNA methylase [Rickettsia bellii OSU 85-389]
Length = 374
Score = 76.9 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 38/107 (35%), Gaps = 25/107 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTF-----------------------NHRNVECFFSSEINPY 38
+K+ LF G GG+ L E F E F ++I
Sbjct: 31 IKVISLFSGCGGLDLGFEGNFNIHESCIKDDDFIKSKNGNTVILKDNPFEIVFCNDIMQE 90
Query: 39 S--VKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I ++K +P D+++ GFPCQ FS AG
Sbjct: 91 AKVAWEANFSNKLEYSTKSIRELKGYLLPKADLVIGGFPCQDFSLAG 137
>gi|293371778|ref|ZP_06618188.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC
3f]
gi|292633230|gb|EFF51801.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC
3f]
Length = 337
Score = 76.9 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIK 60
+ + LF G GG+ L + + ++E + LI GDI I
Sbjct: 1 MNLISLFSGAGGLDLGFHKA----GFKVVTANEFDAKICPTFRANFSDTNLIEGDIRDIP 56
Query: 61 TQDIPDHD-VLLAGFPCQPFSQAG 83
+ + PD+ ++ G PCQ +S+AG
Sbjct: 57 SSEFPDNIAGIIGGPPCQSWSEAG 80
>gi|329960681|ref|ZP_08299024.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fluxus YIT
12057]
gi|328532554|gb|EGF59348.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fluxus YIT
12057]
Length = 572
Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK------TYQANFPNTLIFGD 55
+++ +LF G+GG R+ LE + + ++++ P + + D
Sbjct: 5 IRVVELFAGVGGFRIGLEGASDA--YQTIWNNQWEPSTKRQDASLVYKARFGSKGHSNRD 62
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
I + T++IPDHD+L+ GFPCQ +S A
Sbjct: 63 INTVPTKEIPDHDLLVGGFPCQDYSVA 89
>gi|127453|sp|P25267|MTG1_HERAU RecName: Full=Modification methylase HgiGI; Short=M.HgiGI;
AltName: Full=Cytosine-specific methyltransferase HgiGI
gi|43475|emb|CAA38947.1| methyltransferase [Herpetosiphon aurantiacus]
Length = 126
Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K DLF G GG+ L Q E + + ++ TYQ NF + + D+A++
Sbjct: 1 MKTIDLFAGCGGMSLGFMQA----GFEIVAAVDNWRPAITTYQQNFIHPIHELDLAEVDE 56
Query: 62 ----QDIPDHDVLLAGFPCQPFSQAG 83
++++ G PCQ FS AG
Sbjct: 57 AISLIKTYSPELIIGGPPCQDFSSAG 82
>gi|213024641|ref|ZP_03339088.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
Length = 189
Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+ DLF GIGGIR E +C F+SE N ++V+ Y + DI
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIR 146
Query: 58 KI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
I Q IP HDVLLAGFPCQPFS AG
Sbjct: 147 DITLSHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAG 188
>gi|228969793|ref|ZP_04130554.1| Cytosine-specific methyltransferase [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228789920|gb|EEM37741.1| Cytosine-specific methyltransferase [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 246
Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ DLF GIGGI L + +E EI P++ K ++P IF DI +
Sbjct: 1 MKMLDLFSGIGGISLAADWA----GIETTAFCEIEPFNQKVLNKHWPKVPIFSDIRTLTK 56
Query: 62 Q-------DIPDHDVLLAGFPCQPFSQAG 83
Q D+ ++ GFPCQP+S AG
Sbjct: 57 QSLEERGVDVGTISIVAGGFPCQPYSVAG 85
>gi|1808696|gb|AAC00045.1| putative type II 5-cytosoine methyltransferase [Corynebacterium
glutamicum]
Length = 363
Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
I F G GG+ L L+ + ++++ + +V+TY+ N + ++ GDI +I
Sbjct: 6 TIVSTFSGCGGLDLGLQ----EVGFDPIWANDFSEEAVQTYKHNIGDHIVHGDITEIDPF 61
Query: 63 DI---PDHDVLLAGFPCQPFSQ 81
PD D++ GFPCQ FS
Sbjct: 62 TDDTIPDGDLVTGGFPCQDFSM 83
>gi|62390655|ref|YP_226057.1| modification methylase [Corynebacterium glutamicum ATCC 13032]
gi|21324545|dbj|BAB99169.1| Site-specific DNA methylase or type II 5-cytosine
methyltransferase [Corynebacterium glutamicum ATCC
13032]
gi|41325993|emb|CAF20156.1| MODIFICATION METHYLASE [Corynebacterium glutamicum ATCC 13032]
Length = 363
Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
I F G GG+ L L+ + ++++ + +V+TY+ N + ++ GDI +I
Sbjct: 6 TIVSTFSGCGGLDLGLQ----EVGFDPIWANDFSEEAVQTYKHNIGDHIVHGDITEIDPF 61
Query: 63 DI---PDHDVLLAGFPCQPFSQ 81
PD D++ GFPCQ FS
Sbjct: 62 TDDTIPDGDLVTGGFPCQDFSM 83
>gi|167772229|ref|ZP_02444282.1| hypothetical protein ANACOL_03604 [Anaerotruncus colihominis DSM
17241]
gi|167665332|gb|EDS09462.1| hypothetical protein ANACOL_03604 [Anaerotruncus colihominis DSM
17241]
Length = 603
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M + LF GIGG L +E ++SEI + ++ + FP+ L GDI K+
Sbjct: 1 MPTLGSLFDGIGGFPL----AAVRNGIEPVWASEIEAFPIEVTRKRFPSILHVGDITKLN 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
++P D++ G PCQ S AG
Sbjct: 57 GAELPPVDIITGGSPCQDLSVAG 79
>gi|307140960|ref|ZP_07500316.1| DNA-cytosine methyltransferase [Escherichia coli H736]
gi|331645014|ref|ZP_08346131.1| DNA cytosine methyltransferase M.NgoMIII [Escherichia coli H736]
gi|331035989|gb|EGI08227.1| DNA cytosine methyltransferase M.NgoMIII [Escherichia coli H736]
Length = 413
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 33/91 (36%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K +LF G GG+ + E E E + ++ T + N N +
Sbjct: 12 MKSVELFAGAGGLAMGCEIA----GFEHLAVVEWDKWACDTVRENKKNGFPLLSDWDLFE 67
Query: 62 QD---------IPDHDVLLAGFPCQPFSQAG 83
D D+L G PCQPFS G
Sbjct: 68 GDVREFDWSKIPKGIDLLAGGPPCQPFSIGG 98
>gi|304372874|ref|YP_003856083.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1]
gi|304309065|gb|ADM21545.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1]
Length = 413
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 39/95 (41%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF------GD 55
K DLF G GG+ L E S EI P +V+TY NF N D
Sbjct: 92 YKFIDLFSGAGGLSCGLVMA----GFEPIASVEIMPDAVETYVYNFQNRKKKEELIETRD 147
Query: 56 IAKI-------KTQDIPDHDVLLAGFPCQPFSQAG 83
I + D D+++ GFPCQ FS AG
Sbjct: 148 IRDVKVKEELYNKFKDTDIDLIVGGFPCQGFSMAG 182
>gi|56899928|ref|YP_173301.1| phage-related DNA methylase, N-terminal region [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|56800362|gb|AAW31029.1| phage-related DNA methylase, N-terminal region [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 239
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59
L D F GIGG RL +E+ + +C E + ++ K+Y++ DI I
Sbjct: 3 LTFIDFFAGIGGFRLGMEEASH----KCIGYVEWDKFARKSYESIHNTRGEWTEHDINNI 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
IP DV GFPC S A
Sbjct: 59 IPGAIPKADVWTFGFPCTDISIA 81
>gi|254228592|ref|ZP_04922017.1| Site-specific DNA methylase [Vibrio sp. Ex25]
gi|262392607|ref|YP_003284461.1| DNA-cytosine methyltransferase [Vibrio sp. Ex25]
gi|151938974|gb|EDN57807.1| Site-specific DNA methylase [Vibrio sp. Ex25]
gi|262336201|gb|ACY49996.1| DNA-cytosine methyltransferase [Vibrio sp. Ex25]
Length = 427
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L F GIGG L E ++ E F E+N + + ++ + GDI+ +
Sbjct: 8 LNFNSFFAGIGGFDLAFE----NQGFEPSFQCELNAFCQSVLKKHWGRVPLHGDISNLDA 63
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
+IP V GFPCQ S A
Sbjct: 64 SEIPKATVWCGGFPCQDLSVA 84
>gi|75906326|ref|YP_320622.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
gi|75700051|gb|ABA19727.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
Length = 431
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---------D 55
DLF G GG+ L EQ + + EI+P ++ NFP + +
Sbjct: 20 VDLFAGAGGMTLGFEQA----GFDVLAAVEIDPIHCAVHEYNFPFCSVLCKSVEETTGKE 75
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + D DV++ G PCQ FS G
Sbjct: 76 IRDRSKINNQDIDVIICGSPCQGFSLMG 103
>gi|331082114|ref|ZP_08331242.1| hypothetical protein HMPREF0992_00166 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330405709|gb|EGG85239.1| hypothetical protein HMPREF0992_00166 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 523
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 35/110 (31%), Gaps = 32/110 (29%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------- 50
+K D F GIGG R LE C E + ++ +Y A T
Sbjct: 1 MKFLDFFAGIGGFRRGLELA----GHTCVGFCEFDKFATASYTAMHLMTEEQKNELKILP 56
Query: 51 -----------------LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI + + +P D G PCQ FS AG
Sbjct: 57 LKKRQKEILKEEYRNGEWYANDIRTVDARSLPKADCWCFGAPCQDFSVAG 106
>gi|91215328|ref|ZP_01252299.1| modification methylase (Eco47II, Sau96I) [Psychroflexus torquis
ATCC 700755]
gi|91186280|gb|EAS72652.1| modification methylase (Eco47II, Sau96I) [Psychroflexus torquis
ATCC 700755]
Length = 412
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
+ +LF G GG+ + LEQ+ ++C +EI+ ++ +T ++ GDI
Sbjct: 76 YSVLELFAGAGGLAIGLEQS----GIKCTALNEIDKWACQTLRTNRPSWNILEGDIKNFD 131
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+ + D++ GFPCQ FS AG
Sbjct: 132 FRQYENKVDIVTGGFPCQAFSYAG 155
>gi|289422787|ref|ZP_06424624.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus
anaerobius 653-L]
gi|289156786|gb|EFD05414.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus
anaerobius 653-L]
Length = 536
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M DLF G GG+ L QT + + E NP +TY+ N P +FGD+
Sbjct: 1 MFNTIDLFAGAGGLSLGFMQTKK---FDIKVAYEFNPSMQETYKKNHPGVAVFGDVRDAN 57
Query: 61 TQD----IPDHDVLLAGFPCQPFSQA 82
+ D DV++ G PCQ FS A
Sbjct: 58 YAEIKEKYGDIDVVIGGPPCQGFSNA 83
>gi|317509458|ref|ZP_07967076.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC
BAA-974]
gi|316252287|gb|EFV11739.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC
BAA-974]
Length = 321
Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------ 56
++ DLF G GG+ L E E + + P ++ Y+ NF + I D+
Sbjct: 11 RLLDLFSGCGGLSLGFEAA----GFEVAAAVDNWPEALAVYRRNFRHPAIELDLGDVDLA 66
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++ D ++ G PCQ FS AG
Sbjct: 67 KAVLSEWTAGVDGIIGGPPCQDFSSAG 93
>gi|78778049|ref|YP_394364.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM
1251]
gi|78498589|gb|ABB45129.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM
1251]
Length = 435
Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQ-TFNHRNVECFFSSEINPYSVKTYQANFPN------TLIFG 54
++ +LF G+GG RL LE+ + +++ +S++ P + + ++
Sbjct: 26 IRTVELFAGVGGFRLGLEKTSLENKSYSVVWSNQWEPSTKTQHASDIYCARFGYENHSND 85
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
DI+ + IPDHD+L+ GFPCQ +S A
Sbjct: 86 DISTVDASVIPDHDLLVGGFPCQDYSVA 113
>gi|228911341|ref|ZP_04075144.1| Phage-related DNA methylase [Bacillus thuringiensis IBL 200]
gi|228848278|gb|EEM93129.1| Phage-related DNA methylase [Bacillus thuringiensis IBL 200]
Length = 236
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
L D F G+GG RL +EQ + C E + ++ N DI I
Sbjct: 3 LTFLDFFSGVGGFRLGMEQAKH----RCIGYVEWDKFARASYEAIHNTEGEWTNHDINNI 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
K+ IP DV GFPC S A
Sbjct: 59 KSGTIPKADVWCFGFPCTDISIA 81
>gi|210614083|ref|ZP_03290039.1| hypothetical protein CLONEX_02252 [Clostridium nexile DSM 1787]
gi|210150861|gb|EEA81869.1| hypothetical protein CLONEX_02252 [Clostridium nexile DSM 1787]
Length = 244
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS--VKTYQANFPNTLIFGDIAKIKTQDI 64
+F GIGG R L + C EI+ Y+ N D KI+ +++
Sbjct: 1 MFSGIGGFREGLNRAG---GFSCVGHCEIDKYADRSYRAIFNTEGEWFCNDAKKIRPEEL 57
Query: 65 PDHDVLLAGFPCQPFSQAG 83
P+ D+L GFPCQ FS AG
Sbjct: 58 PEFDLLCGGFPCQAFSVAG 76
>gi|308176203|ref|YP_003915609.1| DNA (cytosine-5-)-methyltransferase-like protein [Arthrobacter
arilaitensis Re117]
gi|307743666|emb|CBT74638.1| DNA (cytosine-5-)-methyltransferase-like protein [Arthrobacter
arilaitensis Re117]
Length = 391
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ LF G GG+ L +E F E + SEIN + + ++P+ GDI I
Sbjct: 32 LRVGSLFSGYGGLDLAVEYQFIA---ETIWFSEINEPVARVFSHHWPDVPNLGDITAIDW 88
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+P D++ GFPCQ S G
Sbjct: 89 TTVPSVDIVCGGFPCQDVSTVG 110
>gi|228918462|ref|ZP_04081908.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228949261|ref|ZP_04111525.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228810387|gb|EEM56744.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228841185|gb|EEM86381.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 413
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-------YSVKTYQANFPNTLIF 53
M+ + +LF G+GG R+ LE+ + + + ++ P + +
Sbjct: 1 MINVIELFAGVGGFRIGLEKIGH---FQIVWGNQWEPSKKAQDAFHCYAQRFQDKGIHCN 57
Query: 54 GDIAKIKTQDIPDH--DVLLAGFPCQPFSQA 82
DIA + ++I ++++ GFPCQ +S A
Sbjct: 58 QDIATVTDEEIQKIEAEMIVGGFPCQDYSVA 88
>gi|313675860|ref|YP_004053856.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
gi|312942558|gb|ADR21748.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
Length = 412
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQ 62
+ +LF G GG+ + LE+ ++C +EI+ ++ +T + N P+ + GDI +
Sbjct: 76 VLELFAGAGGLAVGLEKA----GLKCQALNEIDKWACQTLRNNRPHWNVLEGDIKDFDFK 131
Query: 63 DIPDH-DVLLAGFPCQPFSQAG 83
++ + DV+ GFPCQ FS AG
Sbjct: 132 ELENQIDVVTGGFPCQAFSYAG 153
>gi|127416|sp|P10283|MTB1_BREEP RecName: Full=Modification methylase BepI; Short=M.BepI; AltName:
Full=Cytosine-specific methyltransferase BepI
gi|580766|emb|CAA31907.1| unnamed protein product [Brevibacterium epidermidis]
Length = 403
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 42/122 (34%), Gaps = 40/122 (32%)
Query: 2 LKITDLFCGIGGIRLDLEQTF--------------------------NHRNVECFFSSEI 35
+K+ LF G GG+ L LE F E F+++I
Sbjct: 1 MKVLSLFSGCGGMDLGLEGGFLAHRSSINSDLYASYISDHDENYVYLKKTGFETVFANDI 60
Query: 36 NPYSVKTYQANFPNTLIF--------------GDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
P++ + F N + +I + D DV+ GFPCQ FS
Sbjct: 61 LPFAKLAWCNFFKNRVNQPENIFHLESIVDVVNNIENKQFSFPNDIDVVTGGFPCQDFSF 120
Query: 82 AG 83
AG
Sbjct: 121 AG 122
>gi|167035739|ref|YP_001670970.1| DNA cytosine methylase [Pseudomonas putida GB-1]
gi|166862227|gb|ABZ00635.1| DNA-cytosine methyltransferase [Pseudomonas putida GB-1]
Length = 447
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/102 (42%), Positives = 49/102 (48%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57
DLF GIGGIR EQ C F+SE N +V+TY+AN + DI
Sbjct: 76 FDFIDLFAGIGGIRRGFEQ----HGGRCVFTSEWNDQAVRTYKANHYSDPEHHRYNDDIR 131
Query: 58 KIKTQDI----------------PDHDVLLAGFPCQPFSQAG 83
K+ D PDHDVLLAGFPCQPFS AG
Sbjct: 132 KVTLSDNDDVSEQDVIASIHRQIPDHDVLLAGFPCQPFSIAG 173
>gi|15801798|ref|NP_287816.1| putative DNA modification methyltransferase encoded within
prophage CP-933R [Escherichia coli O157:H7 EDL933]
gi|15831207|ref|NP_309980.1| methyltransferase [Escherichia coli O157:H7 str. Sakai]
gi|217329077|ref|ZP_03445157.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|12515382|gb|AAG56430.1|AE005370_3 putative DNA modification methyltransferase encoded within
prophage CP-933R [Escherichia coli O157:H7 str. EDL933]
gi|13361418|dbj|BAB35376.1| putative methyltransferase [Escherichia coli O157:H7 str. Sakai]
gi|217317516|gb|EEC25944.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|323179669|gb|EFZ65230.1| modification methylase XorII [Escherichia coli 1180]
gi|326343203|gb|EGD66970.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
1044]
Length = 383
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 14/91 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
+ + DLF G+GG+ L + + + EI+ +++ T+ NFP +L +
Sbjct: 1 MNVIDLFSGVGGLSLGAARA----GFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLN 56
Query: 56 ---IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I D+P D ++ G PCQ FS G
Sbjct: 57 AEIIKGFFKNDMPI-DGIIGGPPCQGFSSIG 86
>gi|328948537|ref|YP_004365874.1| DNA (cytosine-5-)-methyltransferase [Treponema succinifaciens DSM
2489]
gi|328448861|gb|AEB14577.1| DNA (cytosine-5-)-methyltransferase [Treponema succinifaciens DSM
2489]
Length = 129
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+K+ LF G GG+ L E+ E ++E + T++ N PNT I GDI IK
Sbjct: 1 MKVISLFSGCGGLDLGFEKA----GFEIPIANEFDSSIWATFEKNHPNTKLIRGDIRNIK 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+D PD D ++ G PCQ +S+AG
Sbjct: 57 EEDFPDEIDGIIGGPPCQSWSEAG 80
>gi|315446158|ref|YP_004079037.1| DNA-methyltransferase Dcm [Mycobacterium sp. Spyr1]
gi|315264461|gb|ADU01203.1| DNA-methyltransferase Dcm [Mycobacterium sp. Spyr1]
Length = 365
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60
LK+ DLF G GG+ + + FS E+N ++ TY ANF + + +GDI +
Sbjct: 5 LKLIDLFAGCGGMTAGF----KPQGFDPVFSVELNLHAAATYAANFGEDHIFWGDIDEAL 60
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
++P+ DV++ G PCQ FS G
Sbjct: 61 KGEVPEADVVIGGPPCQGFSNLG 83
>gi|288559285|ref|YP_003422771.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium
M1]
gi|288541995|gb|ADC45879.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium
M1]
Length = 342
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIA 57
+ DLFCGIGG E + F +I +++T+Q N NT
Sbjct: 5 TVIDLFCGIGGFSKGFEMA----GFDVLFGIDIWDIAIETFQHNHKNTEGILADLTELDD 60
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
Q DV++AG PCQ FS G
Sbjct: 61 DFFKQYTNKVDVIIAGPPCQGFSMCG 86
>gi|166163613|gb|ABY83631.1| DNA methyltransferase Cfr42I [Citrobacter freundii]
Length = 402
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--------PNTLIF 53
+K +LF G GG+ + E E E + ++ T + N L
Sbjct: 1 MKSVELFAGAGGLAMGCEIA----GFEHLAVVEWDKWACDTVRENKKSGFPLLSDWDLFE 56
Query: 54 GDIAKIKTQDIPD-HDVLLAGFPCQPFSQAG 83
GD+ + IP D+L G PCQPFS G
Sbjct: 57 GDVREFDWSKIPKGIDLLAGGPPCQPFSIGG 87
>gi|291543286|emb|CBL16395.1| DNA-methyltransferase (dcm) [Ruminococcus sp. 18P13]
Length = 369
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS--VKTYQANFPNTLIFGDIAKIKT 61
DL GIGG L T + C +EI+ + L +GD+ I
Sbjct: 5 FIDLCSGIGGFHSGLVNTGH---YRCVGHAEIDKNAEKAYNAIYGEEGGLNYGDLRTINP 61
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+++P D+L GFPCQ FS AG
Sbjct: 62 RELPHFDLLCGGFPCQSFSVAG 83
>gi|221232587|ref|YP_002511741.1| DNA modification methylase [Streptococcus pneumoniae ATCC 700669]
gi|220675049|emb|CAR69627.1| putative DNA modification methylase [Streptococcus pneumoniae
ATCC 700669]
Length = 421
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV------KTYQANFPNTLIFGD 55
+K+ +LF G+GG R+ LE + ++++ P + I
Sbjct: 1 MKVLELFAGVGGFRIGLENADKQL-FKTKWANQWEPSRKSQDAFEVYDYHFPNSKNINIS 59
Query: 56 IAKIKTQDI--PDHDVLLAGFPCQPFSQA 82
I+ I + D D+++ GFPCQ +S A
Sbjct: 60 ISDITDEQFSKMDADMIVGGFPCQDYSVA 88
>gi|323693327|ref|ZP_08107545.1| hypothetical protein HMPREF9475_02408 [Clostridium symbiosum
WAL-14673]
gi|323502810|gb|EGB18654.1| hypothetical protein HMPREF9475_02408 [Clostridium symbiosum
WAL-14673]
Length = 536
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M DLF G GG+ L QT + + E NP +TY+ N P +FGD+
Sbjct: 1 MFNTIDLFAGAGGLSLGFMQTKK---FDIKVAYEFNPAMQETYKKNHPGVAVFGDVRDAN 57
Query: 61 TQD----IPDHDVLLAGFPCQPFSQA 82
+ + DV++ G PCQ FS A
Sbjct: 58 YAEIKEKYGNIDVVIGGPPCQGFSNA 83
>gi|315613695|ref|ZP_07888602.1| modification methylase Sau3AI [Streptococcus sanguinis ATCC
49296]
gi|315314386|gb|EFU62431.1| modification methylase Sau3AI [Streptococcus sanguinis ATCC
49296]
Length = 421
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55
+K+ +LF G+GG R+ LE + ++++ P +
Sbjct: 1 MKVLELFAGVGGFRIGLENADKQL-FKTKWANQWEPSRKSQDAFEVYDYHFPNSENINIS 59
Query: 56 IAKIKTQDI--PDHDVLLAGFPCQPFSQA 82
I+ I + D D+++ GFPCQ +S A
Sbjct: 60 ISDITDEQFSKMDADMIVGGFPCQDYSVA 88
>gi|310815203|ref|YP_003963167.1| modification methylase XorII [Ketogulonicigenium vulgare Y25]
gi|308753938|gb|ADO41867.1| modification methylase XorII [Ketogulonicigenium vulgare Y25]
Length = 437
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIKTQD 63
DLF G GG+ L EQ + + EI+P ++ +I + + +D
Sbjct: 7 IDLFSGAGGMSLGFEQA----GFDVVAAVEIDPVHAAVHKFNFPDCAVIPRSVTDVSGED 62
Query: 64 --------IPDHDVLLAGFPCQPFSQAG 83
DV+ G PCQ FS G
Sbjct: 63 IRAEAGIGDQTVDVVFGGAPCQGFSLIG 90
>gi|293365989|ref|ZP_06612691.1| modification methylase Sau3AI [Streptococcus oralis ATCC 35037]
gi|307702387|ref|ZP_07639344.1| DNA-cytosine methyltransferase [Streptococcus oralis ATCC 35037]
gi|291315532|gb|EFE55983.1| modification methylase Sau3AI [Streptococcus oralis ATCC 35037]
gi|307624064|gb|EFO03044.1| DNA-cytosine methyltransferase [Streptococcus oralis ATCC 35037]
Length = 421
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55
+K+ +LF G+GG R+ LE + ++++ P +
Sbjct: 1 MKVLELFAGVGGFRIGLENADKQL-FKTKWANQWEPSRKSQDAFEVYDYHFPNSENINIS 59
Query: 56 IAKIKTQDI--PDHDVLLAGFPCQPFSQA 82
I+ I + D D+++ GFPCQ +S A
Sbjct: 60 ISDITDEQFSKMDADMIVGGFPCQDYSVA 88
>gi|40850587|gb|AAR96017.1| M2.BsaI [Geobacillus stearothermophilus]
Length = 381
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 17/93 (18%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
DLF G GG+ L + +++I+ +++ TY N N ++ GDI K +
Sbjct: 126 FVDLFSGAGGLSLGFLWA----GWKPIIANDIDKWALTTYMNNIHNEVVLGDIRDEKVSE 181
Query: 64 IPDHDVLL-------------AGFPCQPFSQAG 83
L+ G PCQ FS AG
Sbjct: 182 TIIQKCLIAKKSNPDRPLFVLGGPPCQGFSTAG 214
>gi|322511205|gb|ADX06517.1| putative C-5 cytosine specific DNA methyltransferase [Organic Lake
phycodnavirus]
Length = 384
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK+ DLF G G L + T V F +++ +S Y NF + L D+ ++K
Sbjct: 72 LKMIDLFAGTGAFTLAFQLTNA---VNVVFGNDMVEHSKNIYDNNFNHKLTLKDLNEVKN 128
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+DIP HD+L GFPCQPFS AG
Sbjct: 129 EDIPSHDILTGGFPCQPFSIAG 150
>gi|257464589|ref|ZP_05628960.1| putative 5-methylcytosine methyltransferase [Actinobacillus minor
202]
gi|257450249|gb|EEV24292.1| putative 5-methylcytosine methyltransferase [Actinobacillus minor
202]
Length = 331
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
L DLF G GG L + S EI PY +TY+ANFP I
Sbjct: 3 LTYIDLFSGAGGFSLGF----DRVGFCQLLSVEIEPYYCETYRANFPKHHILQRDLTELP 58
Query: 57 --AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D DV++ G PCQ FS AG
Sbjct: 59 DDELLVLLDNQKVDVVIGGPPCQGFSMAG 87
>gi|208434405|ref|YP_002266071.1| type II DNA modification enzyme [Helicobacter pylori G27]
gi|208432334|gb|ACI27205.1| type II DNA modification enzyme [Helicobacter pylori G27]
Length = 348
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN DIA++
Sbjct: 1 MYKVADIFCGAGGLSYGFS---IHPYFELIWANDIDRDAILSYQANHKEAQTILCDIAQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 NCHNLPCVSIDILLGGPPCQSYSTLG 83
>gi|216171|gb|AAA32604.1| DNA methyltransferase [Bacillus phage SPR]
Length = 439
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
L++ LF GIG L E SEI+ Y+VK++ N L FGD++KI
Sbjct: 4 LRVMSLFSGIGAFEAALRNIG--VGYELVGFSEIDKYAVKSFCAIHNVDEQLNFGDVSKI 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +P+ D+L+ G PCQ FS AG
Sbjct: 62 DKKKLPEFDLLVGGSPCQSFSVAG 85
>gi|127431|sp|P00476|MTBS_BPSPR RecName: Full=Modification methylase SPRI; Short=M.SPRI; AltName:
Full=Cytosine-specific methyltransferase SPRI
gi|224091|prf||1010250A methyltransferase
Length = 439
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
L++ LF GIG L E SEI+ Y+VK++ N L FGD++KI
Sbjct: 4 LRVMSLFSGIGAFEAALRNIG--VGYELVGFSEIDKYAVKSFCAIHNVDEQLNFGDVSKI 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +P+ D+L+ G PCQ FS AG
Sbjct: 62 DKKKLPEFDLLVGGSPCQSFSVAG 85
>gi|307941961|ref|ZP_07657314.1| modification methylase NgoPII [Roseibium sp. TrichSKD4]
gi|307774867|gb|EFO34075.1| modification methylase NgoPII [Roseibium sp. TrichSKD4]
Length = 390
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K LF G GG+ L E + + + + Y+V +Y N D+ ++ +
Sbjct: 1 MKAISLFSGCGGMDLGFENA----GISILAAYDSDSYAVSSYNRNVKLCARRIDVNRLDS 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ D+L+A PCQ FS AG
Sbjct: 57 I-PSNFDILIATPPCQGFSTAG 77
>gi|240143787|ref|ZP_04742388.1| Phi-3T prophage-derived modification methylase Phi3TI [Roseburia
intestinalis L1-82]
gi|257204222|gb|EEV02507.1| Phi-3T prophage-derived modification methylase Phi3TI [Roseburia
intestinalis L1-82]
Length = 333
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D FCG GG+ + + + + + Y+V++Y N + + DI ++ QD
Sbjct: 5 VNDFFCGCGGMGVGFLNA----GYKIAGAWDFDKYAVQSYDHNVGHHVKQADIKEMTWQD 60
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
+P V GFPCQ S AG
Sbjct: 61 VPFAHVWAFGFPCQDLSVAG 80
>gi|291336805|gb|ADD96340.1| DNA cytosine 5 methyltransferase [uncultured organism
MedDCM-OCT-S08-C700]
Length = 287
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ D F GIGG E+ E E +PY K ++PN I DI +
Sbjct: 4 LRLLDTFSGIGGFSYAAEKLVG--GYETTQFVENDPYCQKVLNKHWPNVPIHDDIETYRA 61
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++ DV+ GFPCQ S AG
Sbjct: 62 -ELYSADVICGGFPCQDISAAG 82
>gi|291571391|dbj|BAI93663.1| cytosine-specific methyltransferase [Arthrospira platensis
NIES-39]
Length = 390
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 15/90 (16%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-------- 54
DLF G GG+ LE EC + + +++T+Q N P
Sbjct: 8 TFIDLFSGAGGMSCGLEMA----GFECLLGVDFDKSAIQTFQNNHPQAETICGDLREIST 63
Query: 55 -DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I ++ +++ G PCQ FS G
Sbjct: 64 EQIRELIGDRH--INLICGGPPCQGFSTIG 91
>gi|209523295|ref|ZP_03271851.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209496446|gb|EDZ96745.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 387
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 15/90 (16%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-------- 54
DLF G GG+ LE EC + + +++T+Q N P
Sbjct: 9 TFIDLFSGAGGMSCGLEMA----GFECLLGVDFDKSAIQTFQNNHPQAETICGDLREIST 64
Query: 55 -DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I ++ +++ G PCQ FS G
Sbjct: 65 EQIRELIGDRH--INLICGGPPCQGFSTIG 92
>gi|79835459|gb|ABB52089.1| Mod [Arthrospira platensis]
Length = 390
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 15/90 (16%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-------- 54
DLF G GG+ LE EC + + +++T+Q N P
Sbjct: 8 TFIDLFSGAGGMSCGLEMA----GFECLLGVDFDKSAIQTFQNNHPQAETICGDLREIST 63
Query: 55 -DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I ++ +++ G PCQ FS G
Sbjct: 64 EQIRELIGDRH--INLICGGPPCQGFSTIG 91
>gi|127485|sp|P16668|MTS3_STAAU RecName: Full=Modification methylase Sau3AI; Short=M.Sau3AI;
AltName: Full=Cytosine-specific methyltransferase
Sau3AI
gi|153100|gb|AAA26673.1| Sau3AIM protein [Staphylococcus aureus]
Length = 412
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
+K+ +LF G+GG RL LE T N + ++++ P + + + I K
Sbjct: 4 IKVVELFAGVGGFRLGLENTKNGI-FDITWANQWEPSRKIQHAFDCYSKRFKNGIHSNKD 62
Query: 61 -------TQDIPDHDVLLAGFPCQPFSQA 82
+ D+++ GFPCQ +S A
Sbjct: 63 IAQVSDEEMANTEADMIVGGFPCQDYSVA 91
>gi|57505223|ref|ZP_00371152.1| cytosine specific DNA methyltransferase (BSP6IM) [Campylobacter
upsaliensis RM3195]
gi|57016359|gb|EAL53144.1| cytosine specific DNA methyltransferase (BSP6IM) [Campylobacter
upsaliensis RM3195]
Length = 326
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59
+ D GIGG RL LE +C SEI+ ++KTY+ F + D+ +I
Sbjct: 1 MTFIDFCSGIGGGRLGLE----SCGFKCLGFSEIDRAAIKTYKTFFDTSNELELGDLTQI 56
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
Q +PD D+L++GFPCQ FS G
Sbjct: 57 NPQSLPDFDLLISGFPCQSFSIVG 80
>gi|331027909|ref|YP_004421459.1| DNA methylase [Synechococcus phage S-CBS2]
gi|294805522|gb|ADF42361.1| DNA methylase [Synechococcus phage S-CBS2]
Length = 286
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF G+ ++ L + + +F+SEI+ Y+++ Q N+PNT G I +K
Sbjct: 1 MNVLSLFDGMSCGQIALNKLG--IKYDNYFASEIDKYAIQVTQKNYPNTKQIGSITDVKG 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ +P D+L G PCQ FS AG
Sbjct: 59 EYLPKIDLLFGGSPCQSFSNAG 80
>gi|218248203|ref|YP_002373574.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|257060473|ref|YP_003138361.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|218168681|gb|ACK67418.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|256590639|gb|ACV01526.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 460
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDI 56
DLF GIGG R+ L +C SEI+ ++K YQ NF N FGDI
Sbjct: 23 FTFIDLFAGIGGFRIAL----KSLGGKCLGFSEIDKQAIKVYQHNFINYLTSDEREFGDI 78
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+I + D+++ G PCQP+S AG
Sbjct: 79 TQI-PNLPQNVDIIVGGVPCQPWSVAG 104
>gi|320326171|gb|EFW82226.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
Length = 404
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ +LF G GG+ + E E E + ++ T + N +
Sbjct: 1 MRSVELFAGAGGLAMGCEIA----GFEHLAVVEWDKWACDTVRENQKRGYPILAGWNLHE 56
Query: 62 QDIPDHD---------VLLAGFPCQPFSQAG 83
D+ D +L G PCQPFS G
Sbjct: 57 GDVRAFDWSTIPQDIELLAGGPPCQPFSIGG 87
>gi|296329951|ref|ZP_06872435.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676676|ref|YP_003868348.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296152990|gb|EFG93855.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414920|gb|ADM40039.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 488
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN-HRNVECFFSSEINPYSVKTYQAN------FPNTLIFG 54
L++ DLF G GG Q + + E + EIN + T + + +
Sbjct: 5 LRVLDLFAGGGGFSTGFLQANHPNLKFEIIRAVEINQAASDTLRGHLGSEKVIQGDITNS 64
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ K Q D DV++ G PCQ FS AG
Sbjct: 65 DVKKEIFQSCGDIDVVIGGPPCQTFSLAG 93
>gi|317127845|ref|YP_004094127.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM
2522]
gi|315472793|gb|ADU29396.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM
2522]
Length = 363
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 11/88 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61
KI DLF G+GG L E E + + +++TY N N + I +
Sbjct: 5 KIIDLFSGVGGFSLGFEMA----GYETVLAIDFWKDAIETYNHNRENKVAEVMSIHDLSK 60
Query: 62 ------QDIPDHDVLLAGFPCQPFSQAG 83
+ + ++ G PCQ FS G
Sbjct: 61 ERLEKLKSDHTIEGIIGGPPCQGFSTVG 88
>gi|312200922|ref|YP_004020983.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c]
gi|311232258|gb|ADP85113.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c]
Length = 384
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLFCG GG+ L Q + S + + S++T++ANFP I DI
Sbjct: 37 TLIDLFCGAGGMTLGFMQA----GFQPILSIDHDLPSIETHRANFPGMSICTDIRDFV-- 90
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
D P DV++ G PCQ FS+ G
Sbjct: 91 DFPSADVVVGGPPCQGFSRLG 111
>gi|58580230|ref|YP_199246.1| modification methylase XorII [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58424824|gb|AAW73861.1| Modification methylase XorII [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 442
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---------D 55
DLF G GG+ L EQ + + +I+P ++ NFP +
Sbjct: 25 IDLFAGAGGLSLGFEQA----GFDLVAAVDIDPIHCAAHKFNFPKCATVCKSVVDVTGDE 80
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +I D D+++ G PCQ FS G
Sbjct: 81 LRRIAGIGKRDIDIVIGGAPCQGFSLIG 108
>gi|458402|gb|AAA50432.1| M-XorII [Xanthomonas oryzae]
Length = 424
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---------D 55
DLF G GG+ L EQ + + +I+P ++ NFP +
Sbjct: 7 IDLFAGAGGLSLGFEQA----GFDLVAAVDIDPIHCAAHKFNFPKCATVCKSVVDVTRSE 62
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +I D D+++ G PCQ FS G
Sbjct: 63 LRRIAGIGKRDIDIVIGGAPCQGFSLIG 90
>gi|62297515|sp|P52311|MTX2_XANOR RecName: Full=Modification methylase XorII; Short=M.XorII;
AltName: Full=Cytosine-specific methyltransferase XorII
Length = 424
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---------D 55
DLF G GG+ L EQ + + +I+P ++ NFP +
Sbjct: 7 IDLFAGAGGLSLGFEQA----GFDLVAAVDIDPIHCAAHKFNFPKCATVCKSVVDVTGDE 62
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +I D D+++ G PCQ FS G
Sbjct: 63 LRRIAGIGKRDIDIVIGGAPCQGFSLIG 90
>gi|317127846|ref|YP_004094128.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM
2522]
gi|315472794|gb|ADU29397.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM
2522]
Length = 564
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK+ DLF G GG+ EQT + E + E N + KT++ N + IK
Sbjct: 4 LKVIDLFAGAGGLSAGFEQT---DSFEVIAAIENNKNARKTFRRNHKSLRKEFFFRDIKD 60
Query: 62 QDIPDH--------DVLLAGFPCQPFSQA 82
D+++ G PCQ FS A
Sbjct: 61 LKYEQINELKKIGIDIVIGGPPCQGFSNA 89
>gi|308184264|ref|YP_003928397.1| type II DNA modification enzyme [Helicobacter pylori SJM180]
gi|308060184|gb|ADO02080.1| type II DNA modification enzyme [Helicobacter pylori SJM180]
Length = 188
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H + E ++++I+ ++ +YQAN DIA++
Sbjct: 1 MYKVADIFCGAGGLSYGFS---VHPHFELIWANDIDKDAILSYQANHKEAQTILCDIAQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 HCHNLPCVSIDILLGGPPCQSYSTLG 83
>gi|219870523|ref|YP_002474898.1| Type II modification methyltransferase HpaII/DNA
(cytosine-5-)-methyltransferase [Haemophilus parasuis
SH0165]
gi|219690727|gb|ACL31950.1| Type II modification methyltransferase HpaII/DNA
(cytosine-5-)-methyltransferase [Haemophilus parasuis
SH0165]
Length = 350
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60
DLF G GG RL +E+ + C FSSEI+ + KTY NF + + K
Sbjct: 26 FTFIDLFAGFGGFRLAMEKLGGY----CVFSSEIDENAQKTYATNFGEKPYGDITLEETK 81
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+L AGFPCQ FS AG
Sbjct: 82 RLIPTTFDILCAGFPCQAFSIAG 104
>gi|323127564|gb|ADX24861.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
Length = 96
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL L + EC EI+ ++ K+Y + F DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGLT----RQGHECIGFCEIDKFARKSYKAIYETEGEIEFHDIRQV 56
Query: 60 KTQDI----PDHDVLLAGFPCQPFSQAG 83
QD D++ GFPCQ FS AG
Sbjct: 57 TDQDFRQLRGQVDIICGGFPCQAFSLAG 84
>gi|225862882|ref|YP_002748260.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225789623|gb|ACO29840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 360
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKT 61
++ DLFCG GGI E +IN +V+T+ NFP++ + DI KIK
Sbjct: 4 RVIDLFCGCGGISEGF----RLSGFEIVGGLDINEDAVETFNKNFPDSQAYCADIEKIKN 59
Query: 62 QDIPDH-------DVLLAGFPCQPFSQA 82
DIP DV++ G PCQ FS A
Sbjct: 60 DDIPFMFDLLGDIDVIVGGPPCQGFSSA 87
>gi|239624728|ref|ZP_04667759.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
1_7_47_FAA]
gi|239521114|gb|EEQ60980.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
1_7_47FAA]
Length = 554
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+ + DLF G GG+ L +QT V+ ++E N + KTY+ NF ++ D+ I
Sbjct: 22 IYNVIDLFAGAGGLSLGFKQTGQ---VKIIAAAENNLNARKTYKRNFKLARLYSDVRTID 78
Query: 61 TQD----IPDHDVLLAGFPCQPFSQA 82
+ + D+++ G PCQ FS A
Sbjct: 79 YAELQDTVGPVDIVIGGPPCQGFSNA 104
>gi|319787207|ref|YP_004146682.1| DNA-cytosine methyltransferase [Pseudoxanthomonas suwonensis
11-1]
gi|317465719|gb|ADV27451.1| DNA-cytosine methyltransferase [Pseudoxanthomonas suwonensis
11-1]
Length = 443
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 32/88 (36%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---------IFGD 55
DLF G GG+ L EQ + + EI+P + NFP+
Sbjct: 7 IDLFAGAGGLSLGFEQA----GFDVVAAVEIDPVHAAVHAYNFPHCAVLPRSVTDLTAQH 62
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I DV+ G PCQ FS G
Sbjct: 63 IRDAAGIGTRKVDVVFGGAPCQGFSLIG 90
>gi|325298704|ref|YP_004258621.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM
18170]
gi|324318257|gb|ADY36148.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM
18170]
Length = 399
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 1 MLKIT-DLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQ-----ANF 47
M KI LF G GG+ L F R E F+++ + + Y N
Sbjct: 1 MPKIIASLFSGCGGLDLGFTGGFTFRGQFYDRLNTEILFANDFDQDAQSCYNANPLLTNN 60
Query: 48 PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ DI I +IPD D+LLAGFPCQPFS AG
Sbjct: 61 GANCLLADIRDIDANEIPDFDILLAGFPCQPFSNAG 96
>gi|77465763|ref|YP_355266.1| cytosine-specific DNA methylase [Rhodobacter sphaeroides 2.4.1]
gi|77390181|gb|ABA81365.1| Cytosine-specific DNA methylase [Rhodobacter sphaeroides 2.4.1]
Length = 443
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--------- 55
DLF G GG+ L EQ + + EI+P ++ NFP+T +
Sbjct: 6 IDLFAGAGGLSLGFEQA----GFDVAAAVEIDPVHCAVHKFNFPDTAVIPRSVVGLTAEE 61
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + D + G PCQ FS G
Sbjct: 62 IRESAGIGNRPIDCVFGGPPCQGFSLIG 89
>gi|254673893|emb|CBA09676.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis
alpha275]
Length = 326
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFG 54
L DLF G GG+ L EQ + S E+ +TY+ NFP+
Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLT 60
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I + D+++ G PCQ FS AG
Sbjct: 61 EQDLINCLNGQAVDLIIGGPPCQGFSMAG 89
>gi|298492225|ref|YP_003722402.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708]
gi|298234143|gb|ADI65279.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708]
Length = 434
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 17/96 (17%)
Query: 1 MLK----ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-- 54
M + DLF G GG+ L EQ + S E++P ++ NFP +
Sbjct: 1 MFRQRPIAVDLFAGAGGMTLGFEQA----GFDVLVSVELDPIHCAIHKFNFPFWKVLCKS 56
Query: 55 -------DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+I + DV+ G PCQ FS G
Sbjct: 57 VEETTGSEIRNSSDIGNQEIDVVFGGPPCQGFSLIG 92
>gi|291530602|emb|CBK96187.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3]
Length = 369
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS--VKTYQANFPNTLIFGDIAKIKT 61
DL GIGG L T + C +EI+ + L +GD+ I
Sbjct: 5 FIDLCSGIGGFHSGLVNTGH---YRCVGHAEIDKNAEKAYNAIYGEEGGLNYGDLRTINP 61
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+++P D+L GFPCQ FS AG
Sbjct: 62 RELPHFDLLCGGFPCQSFSVAG 83
>gi|170698721|ref|ZP_02889786.1| DNA-cytosine methyltransferase [Burkholderia ambifaria IOP40-10]
gi|170136346|gb|EDT04609.1| DNA-cytosine methyltransferase [Burkholderia ambifaria IOP40-10]
Length = 353
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
K+ F G GG+ L F++R E + EI+ TY+ N
Sbjct: 32 FKVVSFFAGCGGLDLGFTGGFSYRGERFAKLPFEIERAYEIDARCKATYEQNIGPHFETC 91
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D++ + +P+ DVL+ GFPCQ FS G
Sbjct: 92 DLSTADIESMPNADVLIGGFPCQEFSICG 120
>gi|325298662|ref|YP_004258579.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM
18170]
gi|324318215|gb|ADY36106.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM
18170]
Length = 336
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIK 60
+ + LF G GG+ L + ++E++ LI GDI I
Sbjct: 1 MTLISLFSGAGGLDLGFHYA----GFKTIIANELDAKICPTYRINFPDVKLIEGDIRNIP 56
Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83
+ + PD ++ G PCQ +S+AG
Sbjct: 57 SSEFPDGITGIIGGPPCQSWSEAG 80
>gi|268589649|ref|ZP_06123870.1| modification methylase Eco47II [Providencia rettgeri DSM 1131]
gi|291314961|gb|EFE55414.1| modification methylase Eco47II [Providencia rettgeri DSM 1131]
Length = 424
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--KI 59
+ +LF G GG+ L LE+ +EI+ ++ T + N P+ +
Sbjct: 75 FTVLELFAGAGGMALGLEKAGLSA----VMLNEIDKHACNTLRLNRPDWNVVEGDVAGID 130
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+Q DVL GFPCQ FS AG
Sbjct: 131 FSQYKGKVDVLAGGFPCQAFSYAG 154
>gi|218895988|ref|YP_002444399.1| cytosine-specific methyltransferase NlaX [Bacillus cereus G9842]
gi|218540614|gb|ACK93008.1| cytosine-specific methyltransferase NlaX [Bacillus cereus G9842]
Length = 348
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIA 57
+LK DLF GIGG R L + + E EI +I D+
Sbjct: 2 ILKYLDLFAGIGGFRQALINSSLKNVKFEPIGYCEIEKKCQLVYNEIFGTDGEVIVDDVK 61
Query: 58 KIKTQDI---------PDHDVLLAGFPCQPFSQAG 83
KI + D+ P+ D+LL GFPCQPFS G
Sbjct: 62 KIFSPDMVNVDGSKKLPEFDLLLGGFPCQPFSNVG 96
>gi|157953702|ref|YP_001498593.1| hypothetical protein AR158_C512R [Paramecium bursaria Chlorella
virus AR158]
gi|156068350|gb|ABU44057.1| hypothetical protein AR158_C512R [Paramecium bursaria Chlorella
virus AR158]
Length = 352
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 12/91 (13%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF------- 53
++K LF G GG L ++ +E E + ++ T++ NF
Sbjct: 4 IMKAISLFAGAGGDSLGMKMA----GIEVVAFLENDTDAIYTHKRNFDKCHHIGSSVGGD 59
Query: 54 -GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + D D++ AGFPCQ FS AG
Sbjct: 60 ITKIPDEEFKKYGDVDIIFAGFPCQGFSNAG 90
>gi|329767116|ref|ZP_08258644.1| hypothetical protein HMPREF0428_00341 [Gemella haemolysans M341]
gi|328837841|gb|EGF87466.1| hypothetical protein HMPREF0428_00341 [Gemella haemolysans M341]
Length = 396
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIP 65
F G+GGI L E +++EI+ + TY+ NFP+ DI ++K ++I
Sbjct: 5 FFSGVGGIELGFE---KTNKFRVVYANEIDKNARITYKLNFPDVFLDPRDIHEVKPEEIK 61
Query: 66 DH--DVLLAGFPCQPFSQAG 83
+ DV++ GFPCQ FS AG
Sbjct: 62 EEKLDVIVGGFPCQAFSIAG 81
>gi|325857409|ref|ZP_08172464.1| DNA (cytosine-5-)-methyltransferase [Prevotella denticola CRIS
18C-A]
gi|325483119|gb|EGC86099.1| DNA (cytosine-5-)-methyltransferase [Prevotella denticola CRIS
18C-A]
Length = 320
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI----FGDIA 57
+K+ DLFCG GG+ L +Q + + + + Y+ NF + +
Sbjct: 1 MKVVDLFCGCGGLSLGFQQA----GFDIIAAYDNWEAATDVYRLNFSHPVHKADLMNAAR 56
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ ++++ G PCQ +S AG
Sbjct: 57 ASESIMQYSPEMIIGGPPCQDYSSAG 82
>gi|265751237|ref|ZP_06087300.1| DNA-cytosine methyltransferase [Bacteroides sp. 3_1_33FAA]
gi|270294602|ref|ZP_06200804.1| DNA-cytosine methyltransferase [Bacteroides sp. D20]
gi|263238133|gb|EEZ23583.1| DNA-cytosine methyltransferase [Bacteroides sp. 3_1_33FAA]
gi|270276069|gb|EFA21929.1| DNA-cytosine methyltransferase [Bacteroides sp. D20]
Length = 335
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIK 60
+++ LF G GG+ L + ++E + LI GDI I
Sbjct: 1 MELISLFSGAGGLDLGFHKA----GFRTVTANEFDAKICPTFRANFPEVNLIEGDIRDIP 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+ + PD+ ++ G PCQ +S+AG
Sbjct: 57 SCEFPDNITGIIGGPPCQSWSEAG 80
>gi|228964036|ref|ZP_04125166.1| hypothetical protein bthur0004_8960 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228795688|gb|EEM43165.1| hypothetical protein bthur0004_8960 [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 478
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-VECFFSSEINPYSVKTYQAN------FPNTLIFG 54
K+ DLF G GG Q N + S +I+ + KT + +
Sbjct: 4 YKVLDLFAGGGGFSTGFLQAKYQENEFDISKSLDIDKEACKTLSNHLSEKRVVNGDITDN 63
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + D DV++ G PCQ FS AG
Sbjct: 64 RIKEQIFLECEDVDVIIGGPPCQTFSLAG 92
>gi|229183237|ref|ZP_04310467.1| Site-specific DNA-methyltransferase [Bacillus cereus BGSC 6E1]
gi|228600376|gb|EEK57966.1| Site-specific DNA-methyltransferase [Bacillus cereus BGSC 6E1]
Length = 592
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 37/97 (38%), Gaps = 19/97 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
KI DLF G GG+ EQT E + EIN +V+TY N N
Sbjct: 13 YKIIDLFAGAGGLSNGFEQTGR---FEIVGAVEINKEAVETYICNHQNNKEIIIKPKNSE 69
Query: 55 -----DIAKIKTQDIPDHD----VLLAGFPCQPFSQA 82
I + D V++ G PCQ FS A
Sbjct: 70 ISDISSINFHEFMMQKGIDPSETVVIGGPPCQGFSNA 106
>gi|157952870|ref|YP_001497762.1| hypothetical protein NY2A_B566R [Paramecium bursaria Chlorella
virus NY2A]
gi|155123097|gb|ABT14965.1| hypothetical protein NY2A_B566R [Paramecium bursaria Chlorella
virus NY2A]
Length = 349
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53
+K LF G GG L ++ +E E + ++ T++ NF
Sbjct: 19 MKAISLFAGAGGDSLGMKMA----GIEVVAFLENDTDAIYTHKRNFDKCHHIGSSVGGDI 74
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + D D++ AGFPCQ FS AG
Sbjct: 75 TKIPDEEFKKYGDVDIIFAGFPCQGFSNAG 104
>gi|225862883|ref|YP_002748261.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225787129|gb|ACO27346.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 367
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 11/88 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKT 61
KI DLF G+GG L E E F+ + + + + DIA +
Sbjct: 5 KIMDLFSGVGGFSLGFEMA----GYETIFAIDFWKDAIATYNLNRKKDIAVHMDIANLTN 60
Query: 62 ------QDIPDHDVLLAGFPCQPFSQAG 83
++ D + ++ G PCQ FS G
Sbjct: 61 EHLRKLKEEHDIEGIIGGPPCQGFSTVG 88
>gi|159030022|emb|CAO90403.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 412
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
+ +LF G GG+ L LE ++ EIN V T +I DI KIK
Sbjct: 69 YTVIELFAGCGGMALGLENA----GLKTQLLVEINQDCVNTLRLNRPQWNVINQDIKKIK 124
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
D D D++ GFPCQPFS AG
Sbjct: 125 FSDFRDKIDIVAGGFPCQPFSYAG 148
>gi|323650451|gb|ADX97303.1| M.FseI [Frankia sp. Eul1b]
Length = 374
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLFCG GG+ L Q + S + + S++T++ANFP I DI
Sbjct: 27 TLIDLFCGAGGMTLGFMQA----GFQPILSIDHDLPSIETHRANFPGMSICTDIRDFV-- 80
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
D P DV++ G PCQ FS+ G
Sbjct: 81 DFPSADVVVGGPPCQGFSRLG 101
>gi|325270471|ref|ZP_08137073.1| modification methylase DdeI [Prevotella multiformis DSM 16608]
gi|324987194|gb|EGC19175.1| modification methylase DdeI [Prevotella multiformis DSM 16608]
Length = 398
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLFCG GG+ E+ + ++ ++ TYQ N + + + T
Sbjct: 55 YNVLDLFCGCGGMSYGFEKA----GFDVLLGIDVWKDALVTYQHNHRSGGVLCADLSVIT 110
Query: 62 QDI-------PDHDVLLAGFPCQPFSQAG 83
DV++ G PCQ FS AG
Sbjct: 111 GKEVGQHLGGKQVDVIIGGPPCQGFSVAG 139
>gi|219122422|ref|XP_002181544.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406820|gb|EEC46758.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 495
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+LF GIGG + LE EC F SEI+ Y NF GDI +++
Sbjct: 141 FSYAELFAGIGGFGVALE----SLGGECVFCSEIDEVCRTVYALNFSTKNQHGDIYEVRD 196
Query: 62 QDIPDH-DVLLAGFPCQPFS 80
+D P D+L+ GFPCQPFS
Sbjct: 197 RDFPSQLDLLVGGFPCQPFS 216
>gi|251781727|ref|YP_002996029.1| 5-methylcytosine methyltransferase [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242390356|dbj|BAH80815.1| 5-methylcytosine methyltransferase [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
Length = 422
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------FGD 55
+KI +LF G+GG R+ LE + ++++ P +
Sbjct: 1 MKILELFAGVGGFRVGLENADKDL-FQTKWANQWEPSRKSQDAFEVYDYHFSDSQNINIS 59
Query: 56 IAKIKTQDIPDH--DVLLAGFPCQPFSQA 82
I+ I +D D+++ GFPCQ +S A
Sbjct: 60 ISDITDEDFEKMDADMIVGGFPCQDYSVA 88
>gi|18976421|ref|NP_577778.1| cytosine-specific DNA-methyltransferase [Pyrococcus furiosus DSM
3638]
gi|18891953|gb|AAL80173.1| site-specific DNA-methyltransferase (cytosine-specific)
[Pyrococcus furiosus DSM 3638]
Length = 301
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI 59
M + DLF G GG L + + + E P + + DI +
Sbjct: 1 MPSVIDLFAGAGGFSLGFKLA----GFKIISAVENFKPKAKTYSFNFPEVKVYVSDIKAL 56
Query: 60 KTQDIPDHDVLLAGFPCQPFS 80
+D P DV++ G PC+PF+
Sbjct: 57 NPKDFPKADVIIGGPPCEPFT 77
>gi|300863842|ref|ZP_07108767.1| Cytosine-specific methyltransferase (fragment) [Oscillatoria sp.
PCC 6506]
gi|300338190|emb|CBN53913.1| Cytosine-specific methyltransferase (fragment) [Oscillatoria sp.
PCC 6506]
Length = 237
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
DLFCG GG+ L Q + S E NP + T+Q NFP F
Sbjct: 60 YTFVDLFCGAGGMTQGLVQA----GFQPVASVEANPIASATHQKNFPKCHHFCGDIKSFS 115
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + P +++ G PCQ FS AG
Sbjct: 116 PQQWLSQINSPKVHLVVGGPPCQGFSVAG 144
>gi|291543181|emb|CBL16291.1| Site-specific DNA methylase [Ruminococcus bromii L2-63]
Length = 149
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
++ D+F GIGG R LE EC EI+ Y+ + Y + L F D KI
Sbjct: 3 IRYFDMFAGIGGFRSGLEAIG---GFECVGYCEIDKYAKQAYEAMYDTGGELYFDDARKI 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +PD D+L+ GFPCQ FS AG
Sbjct: 60 VLEQLPDFDLLVGGFPCQSFSIAG 83
>gi|127439|sp|P05302|MTD1_DESNO RecName: Full=Modification methylase DdeI; Short=M.DdeI; AltName:
Full=Cytosine-specific methyltransferase DdeI
gi|79418|pir||S00543 site-specific DNA-methyltransferase (cytosine-specific) (EC
2.1.1.73) DdeI - Desulfovibrio desulfuricans
gi|40795|emb|CAA68505.1| DdeI methylase [Desulfovibrio vulgaris]
Length = 415
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
+ I DLF G GG + + E + ++ N ++I DI +
Sbjct: 1 MNIIDLFAGCGGFSHGFKMA----GYNSILAIEKDLWASQTYSFNNPNVSVITEDITTLD 56
Query: 61 TQDIP----DHDVLLAGFPCQPFSQAG 83
D+ D D ++ G PCQ FS +G
Sbjct: 57 PGDLKISVSDVDGIIGGPPCQGFSLSG 83
>gi|325270791|ref|ZP_08137382.1| modification methylase Eco47II [Prevotella multiformis DSM 16608]
gi|324986907|gb|EGC18899.1| modification methylase Eco47II [Prevotella multiformis DSM 16608]
Length = 437
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI- 59
+LF G GG+ L + + +EI P + +T + N P+ + DI ++
Sbjct: 73 FTSVELFAGCGGLALGIHKA----GFRHVLLNEIEPVACRTLRRNRPDWNVLNEDIHRVD 128
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D+L GFPCQ FS AG
Sbjct: 129 FSPLSGKVDLLTGGFPCQAFSYAG 152
>gi|254410214|ref|ZP_05023994.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
gi|196183250|gb|EDX78234.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
Length = 392
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+LFCGIGG R+ + RN+ ++++ P + + Y+ F +
Sbjct: 8 TTVELFCGIGGFRI----AADQRNIATIWANDRCPKACQVYRDRFGKAQLHQGDIYQLVD 63
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+IP HD+L AGFPCQPFS AG
Sbjct: 64 EIPPHDLLTAGFPCQPFSSAG 84
>gi|257060181|ref|YP_003138069.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|256590347|gb|ACV01234.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 336
Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTF-------NHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
+LK +DLFCGIGG R+ L+ C FSS+I+P + K Y+ NF
Sbjct: 15 ILKYSDLFCGIGGFRVALDIVCSTSKRWDKKIKPICVFSSDIDPDAQKNYELNFGEKPFG 74
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI KI+ Q IP+H++L AGFPCQPFS G
Sbjct: 75 -DITKIEAQSIPNHNLLFAGFPCQPFSICG 103
>gi|303231468|ref|ZP_07318199.1| modification methylase HhaI family protein [Veillonella atypica
ACS-049-V-Sch6]
gi|302513905|gb|EFL55916.1| modification methylase HhaI family protein [Veillonella atypica
ACS-049-V-Sch6]
Length = 411
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
I F G+GGI L EQT +++E + + TY+ NFP+ DI +
Sbjct: 9 YTIAAFFSGVGGIELGFEQTNK---FRVVYANEFDKNANITYKLNFPDIQLDNRDIHIVS 65
Query: 61 TQDIPDH--DVLLAGFPCQPFSQAG 83
+ DI DV++ GFPCQ FS AG
Sbjct: 66 SSDIKTEKIDVIVGGFPCQAFSIAG 90
>gi|262402827|ref|ZP_06079388.1| type II restriction-modification system methylation subunit
[Vibrio sp. RC586]
gi|262351609|gb|EEZ00742.1| type II restriction-modification system methylation subunit
[Vibrio sp. RC586]
Length = 341
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ LF G GG+ L + FS++I TY+ N + LI
Sbjct: 11 RTISLFSGCGGLDLGFHKA----GFNIVFSNDIEKNVESTYRYNLGDILIKDITKIDIDS 66
Query: 63 DIPDH-DVLLAGFPCQPFSQAG 83
+IP+ DV+LAG PCQPFS AG
Sbjct: 67 EIPNDIDVILAGIPCQPFSSAG 88
>gi|302383143|ref|YP_003818966.1| DNA-cytosine methyltransferase [Brevundimonas subvibrioides ATCC
15264]
gi|302193771|gb|ADL01343.1| DNA-cytosine methyltransferase [Brevundimonas subvibrioides ATCC
15264]
Length = 377
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ +LF G GG+ + + + E E + ++ +T N P + GD+ +
Sbjct: 1 MRSVELFAGAGGLGIGVARA----GFEPAAVVEWDRWACETLLENKPWPVHRGDVREFSY 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ + +++ G PCQPFS G
Sbjct: 57 DHLANIELVSGGPPCQPFSMGG 78
>gi|307637157|gb|ADN79607.1| DNA cytosine methyltransferase [Helicobacter pylori 908]
Length = 165
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T DIA++
Sbjct: 1 MYKVADIFCGAGGLSYGFS---VHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83
>gi|304388871|ref|ZP_07370921.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC
13091]
gi|302028149|gb|ADK90963.1| unknown [Neisseria meningitidis]
gi|304337164|gb|EFM03348.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC
13091]
gi|316985914|gb|EFV64853.1| modification methylase HphIA [Neisseria meningitidis H44/76]
gi|325143322|gb|EGC65656.1| cytosine-specificmethyltransferase HphIA [Neisseria meningitidis
961-5945]
Length = 276
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFG 54
L DLF G GG+ L EQ + S E+ +TY+ NFP+
Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLT 60
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I + D+++ G PCQ FS AG
Sbjct: 61 EQDLINCLNGQAVDLIIGGPPCQGFSMAG 89
>gi|300867442|ref|ZP_07112096.1| Modification methylase MthTI [Oscillatoria sp. PCC 6506]
gi|300334557|emb|CBN57264.1| Modification methylase MthTI [Oscillatoria sp. PCC 6506]
Length = 350
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQ 62
I LF G GG+ L Q ++SE + +TY+ N P+T DI I +
Sbjct: 9 IVALFSGCGGLDLGFSQA----GFNVIWASEYDKDIWETYENNHPDTFLDKRDIRAISSA 64
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+IPD ++ G PCQ +S+AG
Sbjct: 65 EIPDCTGIIGGSPCQSWSEAG 85
>gi|306828113|ref|ZP_07461376.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pyogenes ATCC
10782]
gi|304429650|gb|EFM32696.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pyogenes ATCC
10782]
Length = 214
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
MLK+ + F GIG R+ L E +EI+ +++K+Y+A GDI+KI
Sbjct: 3 MLKVFEAFAGIGTQRMALRNIGIP--HEVVAIAEIDKFAIKSYEAIHGPVNNLGDISKIN 60
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DIPDHD+ FPCQ S AG
Sbjct: 61 PDDIPDHDLFTYSFPCQDISVAG 83
>gi|258652183|ref|YP_003201339.1| DNA-cytosine methyltransferase [Nakamurella multipartita DSM
44233]
gi|258555408|gb|ACV78350.1| DNA-cytosine methyltransferase [Nakamurella multipartita DSM
44233]
Length = 467
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY----SVKTYQANFPNTLIFGDIA 57
+ DLF G+GG + L C F++E++P + YQ + +
Sbjct: 8 FRFVDLFAGLGGFHVAL----RELGGACVFAAELDPTLNALYAENYQLEAWKDINDLASS 63
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
+I +Q++PDHDVL AGFPCQPFS+AG
Sbjct: 64 RIISQEVPDHDVLTAGFPCQPFSKAG 89
>gi|34014717|dbj|BAC81824.1| methylase [Acidocella facilis]
Length = 443
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--------- 55
DLF G GG+ L EQ + + E++P ++ NFP T +
Sbjct: 6 IDLFAGAGGLSLGFEQA----GFDVVAAVEVDPVHCGVHKFNFPQTAVVPRSVVGLTAAE 61
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I D + G PCQ FS G
Sbjct: 62 IRLAAGIGNRPVDCVFGGPPCQGFSMIG 89
>gi|159026722|emb|CAO89036.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 455
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGG R+ LE C SEI+ +++ YQ NF + L +IA
Sbjct: 24 YRFVDLFAGIGGFRIALE----KLGGRCLGYSEIDKQAIQVYQQNFISYLNSDEIAFGDV 79
Query: 62 QD----IPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQP+S AG
Sbjct: 80 SKISNLPDNLDLIVGGVPCQPWSVAG 105
>gi|291543312|emb|CBL16421.1| DNA-methyltransferase (dcm) [Ruminococcus sp. 18P13]
Length = 668
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF G GG L + ++ + SEI PY+V P+ +GD++K+
Sbjct: 6 LTLGSLFSGSGGFEL----AGIYAGIKPVWLSEIEPYAVLVTHNRLPDVKHYGDVSKLSG 61
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+P D++ G PCQ S AG
Sbjct: 62 ADLPPVDIITFGSPCQDMSIAG 83
>gi|320156908|ref|YP_004189287.1| DNA-cytosine methyltransferase [Vibrio vulnificus MO6-24/O]
gi|319932220|gb|ADV87084.1| DNA-cytosine methyltransferase [Vibrio vulnificus MO6-24/O]
Length = 552
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 48/116 (41%), Gaps = 38/116 (32%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------- 48
DLF GIGG+R E + +C F+SE + + +TY AN
Sbjct: 98 FTFIDLFAGIGGLRKGFE----NVGGKCVFTSEWDEKARRTYLANHYVDESELPYFLNSE 153
Query: 49 -----NTLIFGDIAKI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
F DI +I + IP HDVLLAGFPCQPFS AG
Sbjct: 154 QDDGMKNTNFMDITQITLSGDPEATELQQQASILKHIPKHDVLLAGFPCQPFSLAG 209
>gi|229056682|ref|ZP_04196086.1| Site-specific DNA-methyltransferase [Bacillus cereus AH603]
gi|228720618|gb|EEL72179.1| Site-specific DNA-methyltransferase [Bacillus cereus AH603]
Length = 602
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 37/97 (38%), Gaps = 19/97 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
KI DLF G GG+ EQT E + EIN +V+TY N N
Sbjct: 23 YKIIDLFAGAGGLSNGFEQTGK---FEIVGAVEINKEAVETYICNHQNNKEIIIKPKNSE 79
Query: 55 -----DIAKIKTQDIPDHD----VLLAGFPCQPFSQA 82
I K D V++ G PCQ FS A
Sbjct: 80 ISDISSINFQKFMMQKGIDPSETVVIGGPPCQGFSNA 116
>gi|149373121|ref|ZP_01892009.1| site-specific DNA-methyltransferase [unidentified eubacterium
SCB49]
gi|149354269|gb|EDM42838.1| site-specific DNA-methyltransferase [unidentified eubacterium
SCB49]
Length = 735
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 14/96 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV-ECFFSSEINPYSVKTYQANFPNT---------- 50
DLF G GG Q ++ + +++IN T+ + +
Sbjct: 119 FTFVDLFAGAGGFSEGFLQAEHNNKFFDFVVANDINENCELTHVVRYNHQLGLDAEFLKQ 178
Query: 51 ---LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ + DV+ G PCQ FS AG
Sbjct: 179 DITEPDFLDNLLEKINGRKIDVVCGGPPCQSFSLAG 214
>gi|298206640|ref|YP_003714819.1| site-specific DNA-methyltransferase [Croceibacter atlanticus
HTCC2559]
gi|83849270|gb|EAP87138.1| site-specific DNA-methyltransferase [Croceibacter atlanticus
HTCC2559]
Length = 735
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 14/96 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV-ECFFSSEINPYSVKTYQANFPNT---------- 50
DLF G GG Q ++ + +++IN T+ + +
Sbjct: 119 FTFVDLFAGAGGFSEGFLQAEHNNKFFDFVVANDINENCELTHVVRYNHQLGLDAEFLKQ 178
Query: 51 ---LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ + DV+ G PCQ FS AG
Sbjct: 179 DITEPDFLDNLLEKINGRKIDVVCGGPPCQSFSLAG 214
>gi|258514764|ref|YP_003190986.1| DNA-cytosine methyltransferase [Desulfotomaculum acetoxidans DSM
771]
gi|257778469|gb|ACV62363.1| DNA-cytosine methyltransferase [Desulfotomaculum acetoxidans DSM
771]
Length = 703
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF GIGG L + ++SEI P+ ++ + FP L GDI K+K
Sbjct: 5 LSLGSLFDGIGGFPL----AGVRQGFASVWASEIEPFPIEVTKIRFPEMLHVGDITKLKG 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++ DV+ G PCQ S AG
Sbjct: 61 AELAPVDVVCGGSPCQDLSVAG 82
>gi|89892790|ref|YP_516277.1| hypothetical protein DSY0044 [Desulfitobacterium hafniense Y51]
gi|89332238|dbj|BAE81833.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 721
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG L + ++SEI + ++ + FP L GDI K+
Sbjct: 1 MTMGSLFDGIGGFPL----AAVRNGIAPVWASEIEAFPIEVTKIRFPEMLHVGDITKLNG 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+P DV+ G PCQ S AG
Sbjct: 57 AKLPPVDVICGGSPCQDLSVAG 78
>gi|1709155|sp|P50196|MTE8_ECOLX RecName: Full=Modification methylase Eco47II; Short=M.Eco47II;
AltName: Full=Cytosine-specific methyltransferase
Eco47II
gi|558571|emb|CAA57629.1| site-specific DNA-methyltransferase (cytosine-specific)
[Escherichia coli]
gi|1098127|prf||2115269B methyltransferase Eco47IIM
Length = 417
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI--AK 58
+ + +LF G GG+ L LE+ ++ +EI+ ++ KT + N P +
Sbjct: 80 VYTVLELFAGAGGMALGLEKA----GLKSVLLNEIDSHACKTLRKNRPEWNVVEGDVSQV 135
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
T DVL GFPCQ FS AG
Sbjct: 136 DFTPYRNTVDVLAGGFPCQAFSYAG 160
>gi|313891845|ref|ZP_07825450.1| putative modification methylase HhaI [Dialister microaerophilus
UPII 345-E]
gi|313119839|gb|EFR43026.1| putative modification methylase HhaI [Dialister microaerophilus
UPII 345-E]
Length = 394
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKIKT 61
DLF GIGG LE ++C E + ++ K+Y+ + DI K +
Sbjct: 7 FIDLFSGIGGFHSGLE----KVGMKCVGWCEKDKFAQKSYRALYDTERLWFADDIRKCRG 62
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+P+ + GFPCQ S AG
Sbjct: 63 WGMPNATLWSFGFPCQDISIAG 84
>gi|314998281|ref|ZP_07863147.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium
TX0133a01]
gi|313587745|gb|EFR66590.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium
TX0133a01]
Length = 171
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+ DLF GIGG L +EQ +C EI+ ++ ++Y+A +
Sbjct: 1 MTFLDLFAGIGGFCLGMEQA----GHQCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q + D+L GFPCQ FS AG
Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83
>gi|166368611|ref|YP_001660884.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
gi|166090984|dbj|BAG05692.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 464
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF GIGG R+ LE C SEI+ +++ YQ NF + L +IA
Sbjct: 32 YRFIDLFAGIGGFRIALE----KLGGRCLGYSEIDKQAIQVYQQNFISYLNSNEIAFGDV 87
Query: 62 QD----IPDHDVLLAGFPCQPFSQAG 83
+ D ++ G PCQP+S AG
Sbjct: 88 SKISNLPDNLDFIVGGVPCQPWSVAG 113
>gi|315917412|ref|ZP_07913652.1| cytosine specific DNA methyltransferase [Fusobacterium
gonidiaformans ATCC 25563]
gi|313691287|gb|EFS28122.1| cytosine specific DNA methyltransferase [Fusobacterium
gonidiaformans ATCC 25563]
Length = 358
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 14/92 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----------PNTL 51
+ DLF G GG+ + + + ++KT++ N N
Sbjct: 9 FTVIDLFSGAGGLSKGFLDA----GFDVILGIDFDDSALKTFENNHGKAKALKLDLFNLD 64
Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I ++ DVL+ G PCQ FS AG
Sbjct: 65 NINYIISEFGREHNTLDVLVGGPPCQGFSLAG 96
>gi|257466254|ref|ZP_05630565.1| DNA (cytosine-5-)-methyltransferase [Fusobacterium gonidiaformans
ATCC 25563]
Length = 353
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 14/92 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----------PNTL 51
+ DLF G GG+ + + + ++KT++ N N
Sbjct: 4 FTVIDLFSGAGGLSKGFLDA----GFDVILGIDFDDSALKTFENNHGKAKALKLDLFNLD 59
Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I ++ DVL+ G PCQ FS AG
Sbjct: 60 NINYIISEFGREHNTLDVLVGGPPCQGFSLAG 91
>gi|57116673|gb|AAW33810.1| M.HinP1I methyltransferase [Haemophilus influenzae]
Length = 322
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK D GIGG RL LE +EC SE++ KTY+ F ++ GD+ ++
Sbjct: 4 LKFIDFCAGIGGGRLGLE----LNGMECIAHSEVDLNPAKTYEIFFNDSRNLGDLTQLAP 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ +PD D+++AGFPCQ FS G
Sbjct: 60 KSLPDFDLMIAGFPCQTFSIIG 81
>gi|15612115|ref|NP_223767.1| type II DNA modification (methyltransferase [Helicobacter pylori
J99]
gi|4155654|gb|AAD06642.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter
pylori J99]
Length = 321
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LE +++C +EIN +++TY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLE----RCHLKCVGHAEINHEAIRTYELFFKDTHNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+P+ DVL++GFPCQ FS G
Sbjct: 59 PNDLPNFDVLVSGFPCQAFSING 81
>gi|282901524|ref|ZP_06309446.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis
raciborskii CS-505]
gi|281193567|gb|EFA68542.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis
raciborskii CS-505]
Length = 436
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 14/89 (15%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--------- 55
DLF G GG+ L +E E S EI+P + NFPN
Sbjct: 15 IDLFSGAGGLSLGIESA----GFEVVISIEIDPVHSAIHNYNFPNCANICRDISNVSSEE 70
Query: 56 -IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +DI + D+L G PCQ FSQ G
Sbjct: 71 LWNILNDKDINEVDLLAGGPPCQGFSQMG 99
>gi|331091171|ref|ZP_08340013.1| hypothetical protein HMPREF9477_00656 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405393|gb|EGG84929.1| hypothetical protein HMPREF9477_00656 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 375
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59
DL GIGG+R E T ++EI+ Y+ TYQ + +
Sbjct: 3 FTTIDLCAGIGGMRKGFELTGY---FHNVLAAEIDKYACMTYQHLYGDDANHDLTSEEFK 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D +DVLLAGFPCQ FS+AG
Sbjct: 60 AELDTIQYDVLLAGFPCQTFSKAG 83
>gi|281424544|ref|ZP_06255457.1| modification methylase NgoFVII [Prevotella oris F0302]
gi|281401381|gb|EFB32212.1| modification methylase NgoFVII [Prevotella oris F0302]
Length = 131
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ LF G GG+ L EQ + + ++++ + +T++ +F + ++ GDI +I
Sbjct: 6 IRVVSLFSGCGGLDLGFEQVGD---YKTLWANDFKHEACQTFRRHFGDIIVEGDIEQIDP 62
Query: 62 QDI---PDHDVLLAGFPCQPFSQ 81
+ PD D++L GFPCQ FS
Sbjct: 63 YNNFSVPDCDLVLGGFPCQDFSI 85
>gi|294788934|ref|ZP_06754174.1| modification methylase HphIA [Simonsiella muelleri ATCC 29453]
gi|294483036|gb|EFG30723.1| modification methylase HphIA [Simonsiella muelleri ATCC 29453]
Length = 328
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
L DLF G GG L ++ S E+ +TY+ NFP +
Sbjct: 3 LTYIDLFSGAGGFSLGFDRA----GFRQLLSVELEKTYCETYRTNFPKHHVLQTDLTTLS 58
Query: 57 --AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + DV++ G PCQ FS AG
Sbjct: 59 NEKILNELNGQAVDVVIGGPPCQGFSMAG 87
>gi|238751088|ref|ZP_04612584.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380]
gi|238710778|gb|EEQ03000.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380]
Length = 362
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60
+++ LF G GG+ +E + F+++I + KT FP++ I GDI+ I+
Sbjct: 12 IRVLSLFSGGGGMDFGIESA----GGKVVFANDIVENACKTLDKYFPDSDIRLGDISNIQ 67
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ P DV++ G+PCQ FS AG
Sbjct: 68 SF--PCVDVVVGGYPCQSFSMAG 88
>gi|255692343|ref|ZP_05416018.1| DNA (cytosine-5-)-methyltransferase [Bacteroides finegoldii DSM
17565]
gi|260621969|gb|EEX44840.1| DNA (cytosine-5-)-methyltransferase [Bacteroides finegoldii DSM
17565]
Length = 297
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + +LF GIGG L+ E + SEI ++ ++ NFP G + +I T
Sbjct: 1 MVLLELFSGIGGFSKGLQAAGYS--FEKVYFSEIEKNAIANFKYNFPYAEHIGSVTEIGT 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+I D++ G PCQ FS G
Sbjct: 59 AEIGHPDIITFGSPCQNFSSVG 80
>gi|127487|sp|P09795|MTS1_SALIN RecName: Full=Modification methylase SinI; Short=M.SinI; AltName:
Full=Cytosine-specific methyltransferase SinI
gi|79032|pir||A32008 site-specific DNA-methyltransferase (cytosine-specific) (EC
2.1.1.73) - Salmonella sp
gi|154350|gb|AAA27212.1| modification methylase (M.SinI) [Salmonella enterica subsp.
enterica serovar Infantis]
Length = 461
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K F G G+ L +EQ E +SEI+ + T +N PN + GDI T+
Sbjct: 76 KALSFFSGAMGLDLGIEQA----GFETLLASEIDKAARDTILSNRPNMALIGDIRDYTTE 131
Query: 63 DI---------PDHDVLLAGFPCQPFSQAG 83
DI + D+++ G PCQ FS AG
Sbjct: 132 DILKLAGVSSGNEIDLIMGGPPCQAFSTAG 161
>gi|121997219|ref|YP_001002006.1| DNA-cytosine methyltransferase [Halorhodospira halophila SL1]
gi|121588624|gb|ABM61204.1| DNA-cytosine methyltransferase [Halorhodospira halophila SL1]
Length = 436
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 19/97 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS--VKTYQANFPNTLIFGDIAKI 59
DLF G+GGIR E C FSSE + ++ I DI +I
Sbjct: 70 FSFIDLFAGVGGIRQGFE----SVGGHCVFSSEWDRFALQTYRANFGNEGEEIQTDIRQI 125
Query: 60 KTQDI-------------PDHDVLLAGFPCQPFSQAG 83
P HDVLLAGFPCQPFS AG
Sbjct: 126 TAVSDDADENSRSIDERIPQHDVLLAGFPCQPFSLAG 162
>gi|296501658|ref|YP_003663358.1| type II restriction-modification system methylation subunit
[Bacillus thuringiensis BMB171]
gi|296322710|gb|ADH05638.1| Type II restriction-modification system methylation subunit
[Bacillus thuringiensis BMB171]
Length = 602
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 41/97 (42%), Gaps = 19/97 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGD 55
KI DLF G GG+ EQT E + EIN +V+TY N N +
Sbjct: 23 YKIIDLFAGAGGLSNGFEQTGR---FEIVGAVEINKEAVETYICNHQNNKEIIIKPKNSE 79
Query: 56 IAKIKTQDI----------PDHDVLLAGFPCQPFSQA 82
I+ I + D P V++ G PCQ FS A
Sbjct: 80 ISDISSIDFNEFIMQKGIDPSETVVIGGPPCQGFSNA 116
>gi|325133150|gb|EGC55821.1| modification methylase HphIA [Neisseria meningitidis M6190]
gi|325138766|gb|EGC61318.1| modification methylase HphIA [Neisseria meningitidis ES14902]
gi|325197365|gb|ADY92821.1| modification methylase HphIA [Neisseria meningitidis G2136]
gi|325203202|gb|ADY98655.1| modification methylase HphIA [Neisseria meningitidis M01-240355]
Length = 332
Score = 75.0 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFG 54
L DLF G GG+ L EQ + S E+ +TY+ NFP+
Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLT 60
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I + D+++ G PCQ FS AG
Sbjct: 61 EQDLINCLNGQAVDLIIGGPPCQGFSMAG 89
>gi|167758237|ref|ZP_02430364.1| hypothetical protein CLOSCI_00575 [Clostridium scindens ATCC 35704]
gi|167664134|gb|EDS08264.1| hypothetical protein CLOSCI_00575 [Clostridium scindens ATCC 35704]
Length = 418
Score = 75.0 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GI ++ LE+ +E + + EI+ Y++K + N P+ + GD+ K
Sbjct: 21 MKVLSLFDGISCGKVALERAGIQ--IEEYVAFEIDKYAIKISKKNHPDIIQRGDVTKADF 78
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS AG
Sbjct: 79 SEFEGFDIVIGGSPCQGFSFAG 100
>gi|310830456|ref|YP_003965557.1| Cytosine-specific methyltransferase [Paenibacillus polymyxa SC2]
gi|309249923|gb|ADO59489.1| Cytosine-specific methyltransferase [Paenibacillus polymyxa SC2]
Length = 156
Score = 75.0 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + DLFCG G + + + Y+V TY N N I +I + +
Sbjct: 36 LTMIDLFCGAGIGASGFLLA----GYKIISAVDNQKYAVDTYNRNIENHAICANIRFLNS 91
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++PD DV+ GFPCQPFS +G
Sbjct: 92 NELPDADVISGGFPCQPFSFSG 113
>gi|166365618|ref|YP_001657891.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
gi|166087991|dbj|BAG02699.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 412
Score = 75.0 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
+ +LF G GG+ L LE ++ EIN V T +I DI KIK
Sbjct: 69 YTVIELFAGCGGMALGLENA----GLKTQLLVEINQDCVNTLRLNRPQWNVINQDIKKIK 124
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+ D D++ GFPCQPFS AG
Sbjct: 125 FSNFRDKIDIVAGGFPCQPFSYAG 148
>gi|325972432|ref|YP_004248623.1| DNA-cytosine methyltransferase [Spirochaeta sp. Buddy]
gi|324027670|gb|ADY14429.1| DNA-cytosine methyltransferase [Spirochaeta sp. Buddy]
Length = 402
Score = 75.0 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
+ +LF G+GG R+ LE + + F+++ P + + I
Sbjct: 5 YNVVELFAGVGGFRVGLEASGV---WKVAFANQWEPGKKNQWAFDCYTKHFSEGIHSNAD 61
Query: 58 --KIKTQDIPDHDVLLAGFPCQPFSQA 82
K++ +DIPDH +L+ GFPCQ +S A
Sbjct: 62 IAKVEAKDIPDHSLLVGGFPCQDYSVA 88
>gi|310657624|ref|YP_003935345.1| cytosine-specific methyltransferase [Clostridium sticklandii DSM
519]
gi|308824402|emb|CBH20440.1| Cytosine-specific methyltransferase [Clostridium sticklandii]
Length = 326
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 4 ITDLFCGIGGIRLDL-------EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI 56
+ LFCG GG + L + ++ ++E ++++I+ + + ++ NF DI
Sbjct: 1 MASLFCGCGGTDVGLLGGFKFLDNSYAKNDMEIVYANDIDINACRIFEENFDIMPDNRDI 60
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQ 81
++ + ++P+ D+L GFPCQ FS
Sbjct: 61 REVASNELPEFDILTGGFPCQSFSI 85
>gi|282880843|ref|ZP_06289537.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
gi|281305284|gb|EFA97350.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
Length = 374
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 27/105 (25%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIK 60
+ + D+F G+GG+ + E+ ++EI+ + + + ++ DI
Sbjct: 1 MNVVDIFSGVGGLSVGFEKA----GFNVVLANEIDEQIAQSYKRNHTHTIMVNEDIRSFV 56
Query: 61 TQ----------------------DIPDHDVLLAGFPCQPFSQAG 83
++ D +V++ G PCQ FS AG
Sbjct: 57 DHFDDSISKATERLNSNCKEKLYQELNDINVVIGGPPCQGFSMAG 101
>gi|300118609|ref|ZP_07056347.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus SJ1]
gi|298723998|gb|EFI64702.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus SJ1]
Length = 602
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 40/97 (41%), Gaps = 19/97 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGD 55
KI DLF G GG+ EQT E + EIN +V TY N N +
Sbjct: 23 YKIIDLFAGAGGLSNGFEQTGR---FEIVGAVEINKEAVATYICNHQNNKDIIIKPKNSE 79
Query: 56 IAKIKTQDI----------PDHDVLLAGFPCQPFSQA 82
I+ I + D P V++ G PCQ FS A
Sbjct: 80 ISDISSIDFNEFITQKGIDPSETVVIGGPPCQGFSNA 116
>gi|229824483|ref|ZP_04450552.1| hypothetical protein GCWU000282_01806 [Catonella morbi ATCC
51271]
gi|229786084|gb|EEP22198.1| hypothetical protein GCWU000282_01806 [Catonella morbi ATCC
51271]
Length = 406
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
I F G+GGI L EQT +++E + + TY N+P+T DI ++
Sbjct: 12 YNIAAFFSGVGGIELGFEQTGK---FHTVYANEFDANARTTYALNYPDTFLDPRDIHEVS 68
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+I + D+++ GFPCQ FS AG
Sbjct: 69 PDEIGEQVDLVVGGFPCQAFSIAG 92
>gi|113474395|ref|YP_720456.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
gi|110165443|gb|ABG49983.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
Length = 421
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--------- 55
DLF G GG+ L EQ + S E++P ++ NFP I
Sbjct: 7 IDLFAGAGGMTLGFEQA----GFDIPISVELDPIHCAIHKFNFPFWSILCRNVVELTGNE 62
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + DV+ G PCQ FSQ G
Sbjct: 63 IREKLNIPNREIDVIFGGPPCQGFSQIG 90
>gi|303237411|ref|ZP_07323977.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN]
gi|302482361|gb|EFL45390.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN]
Length = 383
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
+LF G GG+ L E+ +E+N + +T ++N PN + DI +
Sbjct: 44 FTSIELFAGAGGLALGFEKA----GFHHVMLNELNREACETLRSNRPNWNVLEADIHNVD 99
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+ D+L GFPCQ FS AG
Sbjct: 100 FSKWHNQIDLLTGGFPCQAFSYAG 123
>gi|119489697|ref|ZP_01622456.1| putative 5-methylcytosine methyltransferase [Lyngbya sp. PCC
8106]
gi|119454434|gb|EAW35583.1| putative 5-methylcytosine methyltransferase [Lyngbya sp. PCC
8106]
Length = 384
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 11/87 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP----YSVKTYQANFPNTLIFGDIA-- 57
DLF G GG+ LEQ EC + + + +I
Sbjct: 5 FIDLFSGAGGMSCGLEQA----GFECILGIDQDKASLETFQANHHHANIICGDLREITLE 60
Query: 58 -KIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D D++ G PCQ FS G
Sbjct: 61 DIYEQIDNQTVDLICGGPPCQGFSTIG 87
>gi|328553026|gb|AEB23518.1| SP-beta prophage DNA (cytosine-5-)-methyltransferase [Bacillus
amyloliquefaciens TA208]
Length = 503
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
L++ LF GIG L E SEI+ Y++K+Y N FGD++KI
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVE--YELVGFSEIDKYAIKSYCAIHNVDEQSNFGDVSKI 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +P+ D+L+ G PCQ FS AG
Sbjct: 62 DKKKLPEFDLLVGGSPCQSFSVAG 85
>gi|283783021|ref|YP_003373775.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis
409-05]
gi|283441534|gb|ADB14000.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis
409-05]
Length = 357
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAK--- 58
+ DLF G+GG+ L E ++E + + + + ++ GDI
Sbjct: 4 TVIDLFSGVGGLSLGFE----EEGFSVLLANEYDESIANAYMKNHKTTKMVVGDITSLDL 59
Query: 59 --IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ DV++ G PCQ FSQ G
Sbjct: 60 DAVFGTYKNKIDVIIGGPPCQGFSQKG 86
>gi|193071751|ref|ZP_03052649.1| DNA-cytosine methyltransferase [Escherichia coli E110019]
gi|192954951|gb|EDV85456.1| DNA-cytosine methyltransferase [Escherichia coli E110019]
Length = 374
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ DLFCG GG+ E + + N ++ TY ANF + +I + +
Sbjct: 9 FRVIDLFCGAGGLSYGFLHGEMSDYFESILAIDNNAAAINTYNANFGLHGVQANIEEWAS 68
Query: 62 QDI-PDHDVLLAGFPCQPFSQ 81
+ P+ DV++ G PCQ FS
Sbjct: 69 SNTVPEADVVIGGPPCQGFSL 89
>gi|332704951|ref|ZP_08425037.1| DNA-methyltransferase (dcm) [Lyngbya majuscula 3L]
gi|332356303|gb|EGJ35757.1| DNA-methyltransferase (dcm) [Lyngbya majuscula 3L]
Length = 360
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV-KTYQANFPNTLIFGDIAKIKT 61
DLF G GG+ L + + EI+ +V + +I D+ I
Sbjct: 6 NAIDLFAGAGGLSLGFHMA----GWQITTAIEIDKSAVSTYRENFPSTNVIRSDVRAIDF 61
Query: 62 QDIPDHDVLLAGFPCQPFSQ 81
D+++ PCQPFS
Sbjct: 62 TQFQGIDLVVGSPPCQPFSV 81
>gi|317011319|gb|ADU85066.1| type II DNA modification enzyme [Helicobacter pylori
SouthAfrica7]
Length = 321
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LE +++C +EIN +++TY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLE----RCHLKCVGHAEINDEALRTYELFFKDTHNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+P+ DVL++GFPCQ FS G
Sbjct: 59 PNDLPNFDVLISGFPCQAFSING 81
>gi|254465219|ref|ZP_05078630.1| modification methylase XorII [Rhodobacterales bacterium Y4I]
gi|206686127|gb|EDZ46609.1| modification methylase XorII [Rhodobacterales bacterium Y4I]
Length = 437
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIKTQD 63
DLF G GG+ L EQ + + E++P ++ +I + + D
Sbjct: 7 VDLFSGAGGMSLGFEQA----GFDIVAAVELDPVHAAVHKYNFPECAVIPNSVTDVSGAD 62
Query: 64 --------IPDHDVLLAGFPCQPFSQAG 83
DV+ G PCQ FS G
Sbjct: 63 VREAAGIGNKTVDVVFGGAPCQGFSLIG 90
>gi|261364680|ref|ZP_05977563.1| modification methylase Eco47II [Neisseria mucosa ATCC 25996]
gi|288566964|gb|EFC88524.1| modification methylase Eco47II [Neisseria mucosa ATCC 25996]
Length = 419
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKI 59
+ K+ +LF G GG+ + +EQ E +EI+ + KT + ++ GDIAK+
Sbjct: 75 LYKLLELFAGAGGLAIGMEQA----GFESVLLNEIDAAACKTLRKNRPNWNVVEGDIAKL 130
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83
T D+L GFPCQ FS AG
Sbjct: 131 DFTPYRDQIDILSGGFPCQAFSYAG 155
>gi|325997344|gb|ADZ49552.1| Type II DNA modification enzyme [Helicobacter pylori 2017]
Length = 159
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T DIA++
Sbjct: 1 MYKVADIFCGAGGLSYGFS---VHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83
>gi|319936414|ref|ZP_08010830.1| cytosine-specific methyltransferase [Coprobacillus sp. 29_1]
gi|319808529|gb|EFW05081.1| cytosine-specific methyltransferase [Coprobacillus sp. 29_1]
Length = 418
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 15/95 (15%)
Query: 3 KITDLFCGIGGIRLDLEQ---------TFNHRNVECFFSSEINPYSVKTYQANFPN---- 49
+ +LF G+GG R+ L + ++++ P + + +
Sbjct: 4 TVVELFAGVGGFRVGLNHITGFDENGRAIENGEWNFVWANQWEPSTKVQHAFDCYCKRFG 63
Query: 50 --TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
DI+ + DIP+H +L+ GFPCQ +S A
Sbjct: 64 NENHSNVDISLVNKSDIPNHTLLVGGFPCQDYSVA 98
>gi|237711274|ref|ZP_04541755.1| site-specific DNA-methyltransferase [Bacteroides sp. 9_1_42FAA]
gi|229455118|gb|EEO60839.1| site-specific DNA-methyltransferase [Bacteroides sp. 9_1_42FAA]
Length = 296
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + +LF GIGG + L+ E F SEI +++ ++ NFP G + I
Sbjct: 1 MVLLELFSGIGGFSMGLQAAGYS--FEKVFFSEIEKHAIANFKYNFPYAEHIGSVTDIAK 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
I D++ G PCQ FS G
Sbjct: 59 VGIARPDIITFGSPCQNFSAVG 80
>gi|187934831|ref|YP_001884812.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum B str. Eklund 17B]
gi|187722984|gb|ACD24205.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum B str. Eklund 17B]
Length = 424
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52
I +LF G+GG R+ E++ + + ++++ P + +
Sbjct: 3 YTICELFAGVGGFRVGFEKS--SSDWKTVWANQWEPSKKVQHAFECYRSHFETSGGINEF 60
Query: 53 -FGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
DI+++ + IP H VL+ GFPCQ +S A
Sbjct: 61 SNIDISQVPEEHIPGHTVLVGGFPCQDYSVA 91
>gi|1098476|gb|AAC37047.1| orf; homologous to Haemophilus parahaemolyticus hphIM(C)
Accession Number M24625 [Neisseria meningitidis]
Length = 276
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFG 54
L DLF G GG+ L EQ + S E+ +TY+ NFP+
Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLT 60
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I + D+++ G PCQ FS AG
Sbjct: 61 EQDLINCLNGQAVDLIIGGPPCQGFSMAG 89
>gi|116492328|ref|YP_804063.1| site-specific DNA methylase [Pediococcus pentosaceus ATCC 25745]
gi|116102478|gb|ABJ67621.1| Site-specific DNA methylase [Pediococcus pentosaceus ATCC 25745]
Length = 428
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP------YSVKTYQANFPNTLIFGD 55
LK+ +LF G+GG R+ LE + +S++ P + I +
Sbjct: 5 LKVLELFAGVGGFRVGLEHANASL-YKTLWSNQWEPGKKSQDAFEVYNYHFPNSENINEN 63
Query: 56 IAKIKTQDIPDH--DVLLAGFPCQPFSQA 82
I++I + D+++ GFPCQ +S A
Sbjct: 64 ISEISNEKFKTMNADLIVGGFPCQDYSVA 92
>gi|296114087|ref|YP_003628025.1| cytosine-specific methyltransferase [Moraxella catarrhalis RH4]
gi|295921781|gb|ADG62132.1| cytosine-specific methyltransferase [Moraxella catarrhalis RH4]
gi|326560672|gb|EGE11040.1| cytosine-specific methyltransferase [Moraxella catarrhalis
46P47B1]
Length = 318
Score = 74.6 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
DLF G+GG ++ EC F+SE + + KTY AN + + K
Sbjct: 4 FTFIDLFAGVGGFHFAMQ----AVGGECVFASEWDLNAKKTYFANHGFVPYGDITLDETK 59
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ + DVL AGFPCQ FS AG
Sbjct: 60 EKIPQNFDVLCAGFPCQAFSVAG 82
>gi|325995748|gb|ADZ51153.1| DNA-cytosine methyltransferase [Helicobacter pylori 2018]
Length = 160
Score = 74.6 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN T DIA++
Sbjct: 1 MYKVADIFCGAGGLSYGFS---VHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83
>gi|240142445|ref|YP_002966955.1| putative site-specific DNA-methyltransferase [Methylobacterium
extorquens AM1]
gi|240012389|gb|ACS43614.1| putative site-specific DNA-methyltransferase [Methylobacterium
extorquens AM1]
Length = 335
Score = 74.6 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + DLF GIGGI L LE+ E + + ++P+ I D+ +
Sbjct: 8 LTVLDLFSGIGGISLGLERAGP---FRTIAFCEALEARRRILRRHWPDVPIHDDVRTLDG 64
Query: 62 QDIP-----DHDVLLAGFPCQPFSQAG 83
+ DV+ GFPCQ S AG
Sbjct: 65 RSFGAGSSRSVDVICGGFPCQDISLAG 91
>gi|330723541|gb|AEC45911.1| cytosine specific DNA methyltransferase [Mycoplasma hyorhinis MCLD]
Length = 416
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 40/95 (42%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF------GD 55
K DLF G GG+ DL E S EI P +V+TY NF N D
Sbjct: 92 YKFIDLFSGAGGLSCDLVMA----GFEPIASVEIMPDAVETYVYNFQNRKKKEELIETRD 147
Query: 56 IAKI-------KTQDIPDHDVLLAGFPCQPFSQAG 83
I + D D+++ GFPCQ FS AG
Sbjct: 148 IRDVKVKEELYNKFKDTDIDLIVGGFPCQGFSMAG 182
>gi|312200624|ref|YP_004020685.1| C-5 cytosine-specific DNA methylase [Frankia sp. EuI1c]
gi|311231960|gb|ADP84815.1| C-5 cytosine-specific DNA methylase [Frankia sp. EuI1c]
Length = 391
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
+++ L GIG + L LE+ + E +P+ + ++P D+
Sbjct: 1 MRVLSLCSGIGALDLGLERA----GLTTVGQVERDPFCQRVLARHWPEVPRHDDVLTTTE 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D P DV+ GFPCQP S AG
Sbjct: 57 WWTAQPDRPTVDVVAGGFPCQPASVAG 83
>gi|34451616|gb|AAQ72364.1| methylase fusion protein [Geobacillus stearothermophilus]
Length = 1007
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIKT 61
K DLFCG GG+ ++ ++ ++I + T N ++ GDI++ +T
Sbjct: 774 KSIDLFCGAGGLTAGFKEA----GIQSVLCNDIEESACITLKINNPEIKVLCGDISQHET 829
Query: 62 QDI-------PDHDVLLAGFPCQPFSQAG 83
++ D D++ G PCQ FS AG
Sbjct: 830 KEHIVNVAINEDVDIICGGPPCQGFSMAG 858
>gi|1171045|sp|P09915|MTBR_BPRH1 RecName: Full=Modification methylase Rho11sI; Short=M.Rho11sI;
AltName: Full=Bsu P11s; AltName: Full=Cytosine-specific
methyltransferase Rho11sI
gi|579194|emb|CAA28869.1| unnamed protein product [Bacillus phage rho11s]
Length = 503
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
L++ LF GIG L E SEI+ Y++K+Y N L FGD++KI
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVE--YELVGFSEIDKYAIKSYCAIHNADEQLNFGDVSKI 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +P+ D+L+ G PCQ FS AG
Sbjct: 62 DKKKLPEFDLLVGGSPCQSFSVAG 85
>gi|210134686|ref|YP_002301125.1| type II R-M system methyltransferase [Helicobacter pylori P12]
gi|210132654|gb|ACJ07645.1| type II R-M system methyltransferase [Helicobacter pylori P12]
Length = 160
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H + E ++++I+ ++ +YQAN DI ++
Sbjct: 1 MYKVADIFCGAGGLSYGFS---KHPHFELIWANDIDKDAILSYQANHKEAQTILCDIMQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83
>gi|317014507|gb|ADU81943.1| type II DNA modification (methyltransferase) [Helicobacter pylori
Gambia94/24]
Length = 318
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LE +++C +EIN +++TY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLE----RCHLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD DVL++GFPCQ FS G
Sbjct: 59 PNDLPDFDVLVSGFPCQAFSING 81
>gi|313665643|ref|YP_004047514.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma leachii PG50]
gi|312949997|gb|ADR24593.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma leachii PG50]
Length = 327
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----- 57
I DLF G GG+ L Q N E + E +V TY NF + DI
Sbjct: 8 TIIDLFAGAGGLTLGFTQ----NNFEILDTVEFWQPAVDTYNYNFKKNITVKDITNLNVR 63
Query: 58 -KIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ D+++ GFPCQ FS AG
Sbjct: 64 QCLQDNYKSKTDLVIGGFPCQGFSMAG 90
>gi|308183225|ref|YP_003927352.1| type II DNA modification enzyme [Helicobacter pylori PeCan4]
gi|308065410|gb|ADO07302.1| type II DNA modification enzyme [Helicobacter pylori PeCan4]
Length = 318
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LE +++C +EIN +++TY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLE----RCHLKCVGHAEINDEALRTYELFFKDTHNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+P+ DVL++GFPCQ FS G
Sbjct: 59 PNDLPNFDVLVSGFPCQAFSING 81
>gi|228962260|ref|ZP_04123693.1| Phage-related DNA methylase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228797429|gb|EEM44609.1| Phage-related DNA methylase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 180
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
L DLF GIG R+ +E+ +C E N + +Y + DI +
Sbjct: 3 LTFIDLFAGIGMFRIGMEKA----GHKCIGWVEWNKPARTSYEAMHDTKGEWTENDIRNV 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
IP DV AGFPCQ S+ G
Sbjct: 59 TGTGIPAADVWCAGFPCQDISKNG 82
>gi|256375192|ref|YP_003098852.1| DNA-cytosine methyltransferase [Actinosynnema mirum DSM 43827]
gi|255919495|gb|ACU35006.1| DNA-cytosine methyltransferase [Actinosynnema mirum DSM 43827]
Length = 361
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKTQ 62
+ DLF G GG+ E + E + ++ TY ANF + DIA +
Sbjct: 1 MIDLFAGCGGMTSGFTSA----GFEPVMAVEHDLHAASTYAANFGEDHVRWADIAAVPDS 56
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+P DV++ G PCQ FS G
Sbjct: 57 AVPRVDVVVGGPPCQGFSTLG 77
>gi|312278085|gb|ADQ62742.1| Cytosine-specific methyltransferase [Streptococcus thermophilus
ND03]
Length = 424
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------FGD 55
+ + +LF G+GG R+ LE +S++ P N
Sbjct: 1 MNVLELFAGVGGFRIGLENANPDY-FRTLWSNQWEPSRKSQDAFEVYNYHFPDSENINIS 59
Query: 56 IAKIKTQDI--PDHDVLLAGFPCQPFSQA 82
IA I + + D+++ GFPCQ +S A
Sbjct: 60 IADITDEQFAEMNADMIVGGFPCQDYSVA 88
>gi|228478248|ref|ZP_04062856.1| modification methylase Sau3AI [Streptococcus salivarius SK126]
gi|228249927|gb|EEK09197.1| modification methylase Sau3AI [Streptococcus salivarius SK126]
Length = 424
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------FGD 55
+ + +LF G+GG R+ LE +S++ P N
Sbjct: 1 MNVLELFAGVGGFRIGLENANPDY-FRTLWSNQWEPSRKSQDAFEVYNYHFPDSENINIS 59
Query: 56 IAKIKTQDI--PDHDVLLAGFPCQPFSQA 82
IA I + + D+++ GFPCQ +S A
Sbjct: 60 IADITDEQFAEMNADMIVGGFPCQDYSVA 88
>gi|224036442|pdb|3G7U|A Chain A, Crystal Structure Of Putative Dna Modification
Methyltransferase Encoded Within Prophage Cp-933r
(E.Coli)
Length = 376
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 14/91 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
L + DLF G+GG+ L + + + EI+ +++ T+ NFP +L +
Sbjct: 3 LNVIDLFSGVGGLSLGAARA----GFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLN 58
Query: 56 ---IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I D+P D ++ G PCQ FS G
Sbjct: 59 AEIIKGFFKNDMPI-DGIIGGPPCQGFSSIG 88
>gi|205360554|ref|ZP_02684441.2| modification methylase DdeI [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205348823|gb|EDZ35454.1| modification methylase DdeI [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 394
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 11/87 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-------NTLIFGD 55
K+ D F G GG L E + E++ ++ +T++ N P + F D
Sbjct: 5 KVLDTFAGAGGFSLGFHMA----GAEIIGAIEVDSWATETFKFNHPESLVIKKDISQFSD 60
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
++T D++L G PCQ FS A
Sbjct: 61 EEILETFKNNKPDIILGGPPCQGFSIA 87
>gi|210632067|ref|ZP_03297189.1| hypothetical protein COLSTE_01082 [Collinsella stercoris DSM
13279]
gi|210159724|gb|EEA90695.1| hypothetical protein COLSTE_01082 [Collinsella stercoris DSM
13279]
Length = 392
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI--- 59
I DLF G GG+ E + + E ++ Y NF ++ D+ +
Sbjct: 4 TIVDLFAGCGGLSKGFELA----GFDVVAAYENWDSAIACYNLNFNHSAKQLDLNDVDAA 59
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++ G PCQ FS AG
Sbjct: 60 VQEIAPMKPTAIIGGPPCQDFSHAG 84
>gi|254470861|ref|ZP_05084264.1| DNA-cytosine methyltransferase [Pseudovibrio sp. JE062]
gi|211960003|gb|EEA95200.1| DNA-cytosine methyltransferase [Pseudovibrio sp. JE062]
Length = 498
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 18/95 (18%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAK 58
++ DLF G GG+ L + E + E++P++ +++ NF DI
Sbjct: 19 RVLDLFAGCGGLSLGFH----SKGFEIAGAVELDPHAARSHGMNFHPGLETHAQPVDITS 74
Query: 59 IKTQD----------IPDHDVLLAGFPCQPFSQAG 83
+ ++ D+++ G PCQ F++ G
Sbjct: 75 VGPEELAKKLSLGDTDHAIDIIIGGPPCQAFARVG 109
>gi|19552978|ref|NP_600980.1| site-specific DNA methylase or [Corynebacterium glutamicum ATCC
13032]
Length = 356
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI- 64
F G GG+ L L+ + ++++ + +V+TY+ N + ++ GDI +I
Sbjct: 2 STFSGCGGLDLGLQ----EVGFDPIWANDFSEEAVQTYKHNIGDHIVHGDITEIDPFTDD 57
Query: 65 --PDHDVLLAGFPCQPFSQ 81
PD D++ GFPCQ FS
Sbjct: 58 TIPDGDLVTGGFPCQDFSM 76
>gi|186683211|ref|YP_001866407.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
gi|14594714|gb|AAK68647.1| cytosine-specific DNA methyltransferase [Nostoc punctiforme PCC
73102]
gi|186465663|gb|ACC81464.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
Length = 421
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--------- 55
DLF G GG+ L EQ + S EI+P T++ NFP +
Sbjct: 13 VDLFAGAGGMTLGFEQA----GFDVLASVEIDPIHCATHEFNFPYCSVLCQSVVDTTGEE 68
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + DV++ G PCQ FS G
Sbjct: 69 IRSRSKIGDREIDVVICGSPCQGFSLIG 96
>gi|323514189|gb|ADX89637.1| putative DNA-methyltransferase, type II restriction-modification
system (Enterobacteria phage RB16) [Vibrio phage
ICP1_2004_A]
Length = 332
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF G+ R+ LE+ +++SEI+ ++K QAN+P+ + GD+ K +
Sbjct: 1 MNVLSLFDGMACCRIALERAGIQVG--NYYASEIDKNAIKVAQANWPDNIQLGDVTKWQE 58
Query: 62 Q--DIPDHDVLLAGFPCQPFSQAG 83
D ++ GFPCQ +S AG
Sbjct: 59 WGIDWASIGLVTGGFPCQAWSIAG 82
>gi|296392544|ref|YP_003657428.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985]
gi|296179691|gb|ADG96597.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985]
Length = 314
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK-- 60
++ DLF G GG+ L E E + + P ++ Y+ NF + + D+ +
Sbjct: 11 RLLDLFAGCGGLSLGFESA----GFEVALAVDNWPEALAVYRRNFRHRAVELDLGDVDLA 66
Query: 61 ----TQDIPDHDVLLAGFPCQPFSQAG 83
+ + D ++ G PCQ FS AG
Sbjct: 67 SSALRECAAEVDGIIGGPPCQDFSSAG 93
>gi|226807724|ref|YP_002791420.1| Dcm [Enterobacter cloacae]
gi|226810038|ref|YP_002791733.1| Dcm [Enterobacter cloacae]
gi|226425951|gb|ACO54044.1| Dcm [Enterobacter cloacae]
gi|226426265|gb|ACO54357.1| Dcm [Enterobacter cloacae]
Length = 489
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 43/102 (42%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
DLF GIGG+R + +C F+SE N YS + + DI
Sbjct: 106 FSFIDLFAGIGGLRSGF----DAIGGKCLFTSEWNTYSSRTYRANWYCDENEHRFNSDIR 161
Query: 58 KIKTQDIP----------------DHDVLLAGFPCQPFSQAG 83
I + P DHDVLLAGFPCQPFS AG
Sbjct: 162 DITLSNRPEVTDDEAYKFIDASIPDHDVLLAGFPCQPFSIAG 203
>gi|157412142|ref|YP_001481483.1| DNA cytosine methylase [Escherichia coli APEC O1]
gi|99867167|gb|ABF67812.1| cytosine methylase [Escherichia coli APEC O1]
Length = 489
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 43/102 (42%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
DLF GIGG+R + +C F+SE N YS + + DI
Sbjct: 106 FSFIDLFAGIGGLRSGF----DAIGGKCLFTSEWNTYSSRTYRANWYCDENEHRFNSDIR 161
Query: 58 KIKTQDIP----------------DHDVLLAGFPCQPFSQAG 83
I + P DHDVLLAGFPCQPFS AG
Sbjct: 162 DITLSNRPEVTDDEAYKFIDASIPDHDVLLAGFPCQPFSIAG 203
>gi|38347986|ref|NP_941235.1| DNA cytosine methylase [Serratia marcescens]
gi|190410308|ref|YP_001965811.1| dcm [Klebsiella pneumoniae]
gi|38259463|emb|CAE51691.1| DNA-cytosine methyltransferase [Serratia marcescens]
gi|146151102|gb|ABQ02868.1| dcm [Klebsiella pneumoniae]
Length = 475
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 43/102 (42%), Gaps = 24/102 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
DLF GIGG+R + +C F+SE N YS + + DI
Sbjct: 92 FSFIDLFAGIGGLRSGF----DAIGGKCLFTSEWNTYSSRTYRANWYCDENEHRFNSDIR 147
Query: 58 KIKTQDIP----------------DHDVLLAGFPCQPFSQAG 83
I + P DHDVLLAGFPCQPFS AG
Sbjct: 148 DITLSNRPEVTDDEAYKFIDASIPDHDVLLAGFPCQPFSIAG 189
>gi|319956919|ref|YP_004168182.1| DNA-cytosine methyltransferase [Nitratifractor salsuginis DSM
16511]
gi|319419323|gb|ADV46433.1| DNA-cytosine methyltransferase [Nitratifractor salsuginis DSM
16511]
Length = 394
Score = 73.8 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI LF GIG + F E FS EI+ ++ K+Y A + ++ D+ +
Sbjct: 1 MKIATLFSGIGAPEMAARHIFPS--HEIVFSCEIDKFARKSYAAIYGEEPLYHDVHNVPA 58
Query: 62 -QDIPDHDVLLAGFPCQPFSQAG 83
D+L+ G PCQ FS AG
Sbjct: 59 IFYQGHIDLLVGGSPCQSFSVAG 81
>gi|328912201|gb|AEB63797.1| Modification methylase Rho11sI [Bacillus amyloliquefaciens LL3]
Length = 503
Score = 73.8 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
L++ LF GIG L E SEI+ Y++K+Y N L +GD++KI
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVE--YELVGFSEIDKYAIKSYCAIHNVDEQLNYGDVSKI 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+P+ D+L+ G PCQ FS AG
Sbjct: 62 DKTFLPEFDLLVGGSPCQSFSVAG 85
>gi|317009733|gb|ADU80313.1| type II DNA modification enzyme [Helicobacter pylori India7]
Length = 318
Score = 73.8 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLEQ----CHLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD DVL++GFPCQ FS G
Sbjct: 59 PNDLPDFDVLISGFPCQAFSING 81
>gi|207092664|ref|ZP_03240451.1| type II DNA modification enzyme [Helicobacter pylori
HPKX_438_AG0C1]
gi|207108938|ref|ZP_03243100.1| type II DNA modification enzyme [Helicobacter pylori
HPKX_438_CA4C1]
Length = 160
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H + E ++++I+ ++ +YQAN I DI ++
Sbjct: 1 MYKVADIFCGAGGLSYGFST---HPHFELIWANDIDKDAILSYQANHKEVQIILCDIVQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 HCHNLPCVSIDILLGGPPCQSYSTLG 83
>gi|283796860|ref|ZP_06346013.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. M62/1]
gi|291075266|gb|EFE12630.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. M62/1]
Length = 547
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF G GG L + + ++SEI P+ + NFP GDI K+
Sbjct: 5 ITMGSLFSGSGGFEL----AGSIFGIRPIWASEIEPFPILVTTKNFPEMKHLGDINKLNG 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+ ++ G PCQ S AG
Sbjct: 61 ADLEPVTIIAGGSPCQDMSIAG 82
>gi|291566149|dbj|BAI88421.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
Length = 379
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60
+ +LF G GG+ LE +E EI+ + T N+ + + DI +
Sbjct: 1 MSGLELFAGAGGLAKGLEMA----GIEHKALVEIDHNACLTLAGNYKPELIYYVDIRSLN 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ D++ G PCQPFS G
Sbjct: 57 FAEFGHIDLISGGPPCQPFSMGG 79
>gi|281425045|ref|ZP_06255958.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Prevotella oris F0302]
gi|281400889|gb|EFB31720.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Prevotella oris F0302]
Length = 412
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
++ LF GIG E + F EI+ + +PN++ + +I K
Sbjct: 4 IITHASLFSGIG----APELAAFWLGWQNAFHCEISKFCNTILNYWYPNSIGYENIKKTD 59
Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83
DVL GFPCQPFS AG
Sbjct: 60 FSKWQGKIDVLTGGFPCQPFSSAG 83
>gi|284989342|ref|YP_003407896.1| DNA-cytosine methyltransferase [Geodermatophilus obscurus DSM
43160]
gi|284062587|gb|ADB73525.1| DNA-cytosine methyltransferase [Geodermatophilus obscurus DSM
43160]
Length = 671
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
DLF G GG+ L LEQ FS++ +P +V+T+ +F + D+A +
Sbjct: 52 DLFSGAGGMSLGLEQA----GFRVVFSADHDPEAVETHAHHFGGMSVDWDLADADAVERV 107
Query: 66 DH-------DVLLAGFPCQPFSQAG 83
++L G PCQPFS+AG
Sbjct: 108 AATLRAVGVELLAGGPPCQPFSKAG 132
>gi|313144510|ref|ZP_07806703.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi
CCUG 18818]
gi|313129541|gb|EFR47158.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi
CCUG 18818]
Length = 323
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59
+ D GIGG RL LE ++C SEI+ ++KTY+ F + D+ +I
Sbjct: 1 MTFIDFCSGIGGGRLGLE----SCGLKCLGFSEIDRAAIKTYKTFFNTSNELELGDLTQI 56
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
Q +PD D+L++GFPCQ FS G
Sbjct: 57 NPQSLPDFDLLISGFPCQSFSIVG 80
>gi|325678040|ref|ZP_08157677.1| putative modification methylase BspRI [Ruminococcus albus 8]
gi|324110257|gb|EGC04436.1| putative modification methylase BspRI [Ruminococcus albus 8]
Length = 358
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60
+ + DLFCG GG + + +I ++ TY NFPN I DI+ +K
Sbjct: 1 MNVFDLFCGCGGFSKGFQSA----GFDIKLGIDIWQDAITTYNHNFPNAVTITEDISNLK 56
Query: 61 TQD--------IPDHDVLLAGFPCQPFSQAG 83
+D + DV++ G PCQ FS +G
Sbjct: 57 GEDLLSRANLTADEVDVIIGGPPCQGFSLSG 87
>gi|224438066|ref|ZP_03659005.1| DNA-cytosine methyltransferase [Helicobacter cinaedi CCUG 18818]
Length = 342
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59
+ D GIGG RL LE ++C SEI+ ++KTY+ F + D+ +I
Sbjct: 20 MTFIDFCSGIGGGRLGLE----SCGLKCLGFSEIDRAAIKTYKTFFNTSNELELGDLTQI 75
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
Q +PD D+L++GFPCQ FS G
Sbjct: 76 NPQSLPDFDLLISGFPCQSFSIVG 99
>gi|182417652|ref|ZP_02948971.1| modification methylase Sau3AI [Clostridium butyricum 5521]
gi|237668746|ref|ZP_04528730.1| modification methylase Sau3AI (Cytosine-specificmethyltransferase
Sau3AI) (M.Sau3AI) [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182378376|gb|EDT75907.1| modification methylase Sau3AI [Clostridium butyricum 5521]
gi|237657094|gb|EEP54650.1| modification methylase Sau3AI (Cytosine-specificmethyltransferase
Sau3AI) (M.Sau3AI) [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 426
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 1 ML--KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------ 52
ML I +LF G+GG R+ E++ + ++++ P + +
Sbjct: 1 MLQHTICELFAGVGGFRVGFEKSSPE--WKTVWANQWEPSKKIQHAFECYKSHFETSGGI 58
Query: 53 ----FGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
DI+K+ + IPDH VL+ GFPCQ +S A
Sbjct: 59 DEFSNTDISKVPEEHIPDHTVLVGGFPCQDYSVA 92
>gi|310657622|ref|YP_003935343.1| cytosine-specific methyltransferase [Clostridium sticklandii DSM
519]
gi|308824400|emb|CBH20438.1| Cytosine-specific methyltransferase [Clostridium sticklandii]
Length = 344
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60
+ + DLFCG GG+ EQ + + +++T++ N N+ DI +I
Sbjct: 1 MNLIDLFCGCGGLSYGFEQA----GFNVLLGIDNDKAALETFKLNHKNSKTICGDIREIT 56
Query: 61 TQD------IPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ S +G
Sbjct: 57 FDEINNVIGNKKIDLIVGGPPCQGMSLSG 85
>gi|308229532|gb|ADO24181.1| M.ApaI [Acetobacter pasteurianus subsp. pasteurianus]
Length = 349
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKI- 59
+K DLF G GG+ L ++ +E E N +V TY DI I
Sbjct: 1 MKALDLFSGPGGLSLGMKHA----GIEPVACVEKNKDAVSTYDAHTPDAEHYCSDIRSIS 56
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D++ G PCQPFS G
Sbjct: 57 FERYRGLVDIVFGGPPCQPFSTGG 80
>gi|2894386|emb|CAA74996.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase
(C1) [Bacillus pumilus]
Length = 398
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----IAKIK 60
DLF G GG+ L E E + EI+ ++V TY+ N N+ + + I
Sbjct: 11 IDLFAGAGGMSLGFENA----GFEIPLAVEIDDWAVDTYRKNRENSNVIKNDILEIDNAF 66
Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81
+ D ++ G PCQ FS
Sbjct: 67 FKQFSGIDAVIGGPPCQGFSI 87
>gi|317483873|ref|ZP_07942812.1| C-5 cytosine-specific DNA methylase [Bilophila wadsworthia 3_1_6]
gi|316924890|gb|EFV46037.1| C-5 cytosine-specific DNA methylase [Bilophila wadsworthia 3_1_6]
Length = 401
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--------NTLIF 53
+K +LF G GG+ L + E + ++ T + N L
Sbjct: 1 MKSVELFAGAGGLALGVSLAGFTSG----AVIEWDKWACDTIRENQQRQNPLVADWPLHE 56
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ I D+L G PCQPFS G
Sbjct: 57 QDVRLFDFSTIKGIDLLAGGPPCQPFSLGG 86
>gi|307277185|ref|ZP_07558289.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX2134]
gi|306506115|gb|EFM75281.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX2134]
Length = 429
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV------KTYQANFPNTLIFGD 55
L + +LF G+GG R+ LE + + ++++ P + I +
Sbjct: 9 LNVLELFAGVGGFRVGLEHSNADL-FKTKWANQWEPSRKSQDAFEVYDYRFPNSENINRN 67
Query: 56 IAKIKT--QDIPDHDVLLAGFPCQPFSQA 82
I +I + D D+++ GFPCQ +S A
Sbjct: 68 IEEISNEEFEQMDADIIVGGFPCQDYSVA 96
>gi|238922582|ref|YP_002936095.1| cytosine-specific methyltransferase [Eubacterium rectale ATCC
33656]
gi|238874254|gb|ACR73961.1| cytosine-specific methyltransferase [Eubacterium rectale ATCC
33656]
Length = 443
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Query: 1 ML-KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT------YQANFPNTLIF 53
ML KI DLF G GG+ L E+ + E+ P + KT ++ T I
Sbjct: 1 MLPKIIDLFSGCGGLALGFEKA----GFDIVAGIELMPEACKTISYNLSWRYGKKETHIC 56
Query: 54 GDIAKIKTQDIPDH-----DVLLAGFPCQPFSQAG 83
GDI +I+ + +++ G PCQ +S AG
Sbjct: 57 GDITEIEASVFKNSFGDEGCIVIGGPPCQAYSMAG 91
>gi|254412384|ref|ZP_05026158.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
gi|196180694|gb|EDX75684.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
Length = 221
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 17/96 (17%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-----IFGD 55
ML LF G GG+ + + Q E EI+PY KT ++ I D
Sbjct: 1 MLSALSLFSGAGGMDIGVRQA----GFEILADIEIDPYCCKTIRSAMDRENLRTLLIEKD 56
Query: 56 IAKIKTQD--------IPDHDVLLAGFPCQPFSQAG 83
I ++ D D+L G PCQ FSQAG
Sbjct: 57 IKQVDPSHLIRELTIQPGDLDLLFGGSPCQSFSQAG 92
>gi|328958689|ref|YP_004376075.1| DNA-methyltransferase [Carnobacterium sp. 17-4]
gi|328675013|gb|AEB31059.1| DNA-methyltransferase [Carnobacterium sp. 17-4]
Length = 431
Score = 73.4 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
I +LF G+GG R+ E + + ++++ P + + +
Sbjct: 5 FNILELFAGVGGFRVGFENSNESM-FKTKWANQWEPAKKSQDAFEVYDYHYPESMNINEN 63
Query: 62 QDI--------PDHDVLLAGFPCQPFSQA 82
+ D D+++ GFPCQ +S A
Sbjct: 64 IEEISDEAFQSMDADIIVGGFPCQDYSVA 92
>gi|307637790|gb|ADN80240.1| DNA-cytosine methyl transferase [Helicobacter pylori 908]
gi|325996388|gb|ADZ51793.1| DNA-cytosine methyltransferase [Helicobacter pylori 2018]
gi|325997976|gb|ADZ50184.1| Type II DNA modification enzyme/ methyltransferase [Helicobacter
pylori 2017]
Length = 318
Score = 73.4 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LE +++C +EIN +++TY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLE----RCHLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD DVL++GFPCQ FS G
Sbjct: 59 PNDLPDFDVLVSGFPCQAFSING 81
>gi|282897137|ref|ZP_06305139.1| C-5 cytosine-specific DNA methylase [Raphidiopsis brookii D9]
gi|281197789|gb|EFA72683.1| C-5 cytosine-specific DNA methylase [Raphidiopsis brookii D9]
Length = 435
Score = 73.4 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIKTQD 63
DLF G GG+ L +E E S EI+P +S I DI+ + +++
Sbjct: 15 IDLFSGAGGLSLGIESA----GFEVVISIEIDPVHSAIHNYNFPNCANICRDISNVSSEE 70
Query: 64 IPDH---------DVLLAGFPCQPFSQAG 83
+ + D+L G PCQ FSQ G
Sbjct: 71 LWNILNDKHINEVDLLAGGPPCQGFSQMG 99
>gi|254443346|ref|ZP_05056822.1| C-5 cytosine-specific DNA methylase superfamily [Verrucomicrobiae
bacterium DG1235]
gi|198257654|gb|EDY81962.1| C-5 cytosine-specific DNA methylase superfamily [Verrucomicrobiae
bacterium DG1235]
Length = 349
Score = 73.4 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+D+F G GG R LE C FS E++ ++ +TYQANF T DI +
Sbjct: 34 FTFSDIFAGAGGGRFALE----RLEGRCVFSCELDKFAQRTYQANFGETPYG-DIFDVSP 88
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ +P H++L AGFPCQPFS AG
Sbjct: 89 KSVPPHNILFAGFPCQPFSHAG 110
>gi|220930206|ref|YP_002507115.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10]
gi|220000534|gb|ACL77135.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10]
Length = 719
Score = 73.4 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF G GG L +E ++SEI P+ ++ P +GDI K+
Sbjct: 4 LTLGSLFDGSGGFPLG----GLLCGIEPLWASEIEPFPIRVTTKRIPQMKHYGDINKLNG 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++P D++ G PC S AG
Sbjct: 60 AELPPVDIITFGSPCTDMSVAG 81
>gi|332706962|ref|ZP_08427022.1| DNA-methyltransferase [Lyngbya majuscula 3L]
gi|332354227|gb|EGJ33707.1| DNA-methyltransferase [Lyngbya majuscula 3L]
Length = 450
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI---------F 53
LFCG GG L +Q ++++ + +V+TY+ NF +L F
Sbjct: 29 TAISLFCGAGGCSLGFKQA----GYSIVYANDKDAAAVETYRINFTESLCSNEDIDNLDF 84
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
G + + D+L+ G PCQ FS AG
Sbjct: 85 GQVLSEIVMKPGELDILIGGPPCQGFSTAG 114
>gi|17228429|ref|NP_484977.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
gi|17130280|dbj|BAB72891.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
Length = 477
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K F G G+ L E+ +E + E++ Y +T AN P+ + GDIA Q
Sbjct: 74 KAISFFSGAMGLDLGFEKA----GIEILLACEVDKYCRQTIVANKPDIALLGDIAAYSAQ 129
Query: 63 DI--------PDHDVLLAGFPCQPFSQAG 83
DI D D++L G PCQ FS AG
Sbjct: 130 DILDHANLAKEDVDIMLGGPPCQAFSTAG 158
>gi|256419690|ref|YP_003120343.1| DNA-cytosine methyltransferase [Chitinophaga pinensis DSM 2588]
gi|256034598|gb|ACU58142.1| DNA-cytosine methyltransferase [Chitinophaga pinensis DSM 2588]
Length = 390
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 14/93 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ DL+CG GG+ + E T E + ++VKT+ N P I K
Sbjct: 4 IKVLDLYCGYGGLSMGFEFTKA---FEVVGGIDFYDWAVKTFYYNHPQLNKLKVINKPCD 60
Query: 62 QDI-----------PDHDVLLAGFPCQPFSQAG 83
D+++ G PCQ FS AG
Sbjct: 61 MTNLETSEVLKDIGGKPDIIVGGPPCQGFSFAG 93
>gi|197303495|ref|ZP_03168534.1| hypothetical protein RUMLAC_02217 [Ruminococcus lactaris ATCC
29176]
gi|197297493|gb|EDY32054.1| hypothetical protein RUMLAC_02217 [Ruminococcus lactaris ATCC
29176]
Length = 496
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+ K DL GIGGIR E T E S+EI+PY+ TY+ F ++
Sbjct: 2 IYKTIDLCAGIGGIRRGFEMTGL---FENVLSAEIDPYAALTYKHLFGEDPTNDLTSEDF 58
Query: 61 TQD--IPDHDVLLAGFPCQPFSQAG 83
+ ++DVLLAGFPCQ FS+ G
Sbjct: 59 KNEVVNTEYDVLLAGFPCQAFSRVG 83
>gi|167837977|ref|ZP_02464836.1| modification methylase HaeII [Burkholderia thailandensis MSMB43]
Length = 111
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF G+GG L L+ C +++E + Y+ NF DI I
Sbjct: 4 FRFVDLFAGLGGFHLALQ----RLGGTCVYAAEWQEHLRDLYEVNFGLRPEG-DITLISP 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+D+P HDVL AGFPCQPFS+AG
Sbjct: 59 KDVPSHDVLTAGFPCQPFSKAG 80
>gi|12583593|emb|CAC27339.1| Sth368IM methyltranferase [Streptococcus thermophilus]
gi|15485439|emb|CAC67533.1| M.Sth368I methyltransferase [Streptococcus thermophilus]
Length = 421
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF------GD 55
+ + +LF G+GG R+ LE + + + +S++ P N
Sbjct: 1 MNVLELFAGVGGFRIGLENSDKNF-FKTRWSNQWEPSRKSQDAFEVYNYHFPDSENIGYS 59
Query: 56 IAKIKTQDI--PDHDVLLAGFPCQPFSQA 82
I+ I + D D+++ GFPCQ +S A
Sbjct: 60 ISDISDEKFASMDADMIVGGFPCQDYSVA 88
>gi|240114016|ref|ZP_04728506.1| putative 5-methylcytosine methyltransferase [Neisseria
gonorrhoeae MS11]
Length = 333
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIK 60
L DLF G GG+ L EQ + S E+ Y + L+ D+ +
Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPRHQLLQKDLTTLT 60
Query: 61 TQDIPDH------DVLLAGFPCQPFSQAG 83
QD+ + D+++ G PCQ FS AG
Sbjct: 61 EQDLTNCLNGQSVDLVIGGPPCQGFSMAG 89
>gi|315230475|ref|YP_004070911.1| DNA-cytosine methyltransferase [Thermococcus barophilus MP]
gi|315183503|gb|ADT83688.1| DNA-cytosine methyltransferase [Thermococcus barophilus MP]
Length = 321
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 9/87 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI 59
M I DLF G GG ++ + + E P + + DI +I
Sbjct: 1 MYTIIDLFAGAGGFSRGFKEA----GFKILAAIENFAPKADTYKFNFPEVRMYVEDIKRI 56
Query: 60 KT----QDIPDHDVLLAGFPCQPFSQA 82
T +D+ DV++ G PC+P++ A
Sbjct: 57 HTIDVMRDVGVPDVIIGGPPCEPYTAA 83
>gi|42779474|ref|NP_976721.1| DNA-cytosine methyltransferase [Bacillus cereus ATCC 10987]
gi|42735390|gb|AAS39329.1| DNA-cytosine methyltransferase [Bacillus cereus ATCC 10987]
Length = 719
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF G GG L +E ++SEI P+ ++ P +GDI K+
Sbjct: 4 LTLGSLFDGSGGFPLG----GLLCGIEPLWASEIEPFPIRVTTKRIPQMKHYGDINKLNG 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
++P D++ G PC S AG
Sbjct: 60 AELPPVDIITFGSPCTDMSVAG 81
>gi|59802210|ref|YP_208922.1| putative 5-methylcytosine methyltransferase [Neisseria
gonorrhoeae FA 1090]
gi|239997871|ref|ZP_04717795.1| putative 5-methylcytosine methyltransferase [Neisseria
gonorrhoeae 35/02]
gi|240015148|ref|ZP_04722061.1| putative 5-methylcytosine methyltransferase [Neisseria
gonorrhoeae DGI18]
gi|240017596|ref|ZP_04724136.1| putative 5-methylcytosine methyltransferase [Neisseria
gonorrhoeae FA6140]
gi|240081740|ref|ZP_04726283.1| putative 5-methylcytosine methyltransferase [Neisseria
gonorrhoeae FA19]
gi|240116752|ref|ZP_04730814.1| putative 5-methylcytosine methyltransferase [Neisseria
gonorrhoeae PID18]
gi|240118973|ref|ZP_04733035.1| putative 5-methylcytosine methyltransferase [Neisseria
gonorrhoeae PID1]
gi|240122219|ref|ZP_04735181.1| putative 5-methylcytosine methyltransferase [Neisseria
gonorrhoeae PID24-1]
gi|240124509|ref|ZP_04737465.1| putative 5-methylcytosine methyltransferase [Neisseria
gonorrhoeae PID332]
gi|240124618|ref|ZP_04737504.1| putative 5-methylcytosine methyltransferase [Neisseria
gonorrhoeae SK-92-679]
gi|240129189|ref|ZP_04741850.1| putative 5-methylcytosine methyltransferase [Neisseria
gonorrhoeae SK-93-1035]
gi|260439487|ref|ZP_05793303.1| putative 5-methylcytosine methyltransferase [Neisseria
gonorrhoeae DGI2]
gi|268593717|ref|ZP_06127884.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02]
gi|268597838|ref|ZP_06132005.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19]
gi|268683185|ref|ZP_06150047.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae
SK-92-679]
gi|291042721|ref|ZP_06568462.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2]
gi|293398253|ref|ZP_06642458.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|2330911|gb|AAC45838.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae]
gi|59719105|gb|AAW90510.1| putative 5-methylcytosine methyltransferase [Neisseria
gonorrhoeae FA 1090]
gi|268547106|gb|EEZ42524.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02]
gi|268551626|gb|EEZ46645.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19]
gi|268623469|gb|EEZ55869.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae
SK-92-679]
gi|291013155|gb|EFE05121.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2]
gi|291611516|gb|EFF40586.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|317165321|gb|ADV08862.1| putative 5-methylcytosine methyltransferase [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 333
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIK 60
L DLF G GG+ L EQ + S E+ Y + L+ D+ +
Sbjct: 5 LTYIDLFSGAGGLSLGFEQA----GFQQLLSVEMESDYCQTYRTNFPRHQLLQKDLTTLT 60
Query: 61 TQDIPDH------DVLLAGFPCQPFSQAG 83
QD+ + D+++ G PCQ FS AG
Sbjct: 61 EQDLTNCLNGQSVDLVIGGPPCQGFSMAG 89
>gi|332711623|ref|ZP_08431554.1| DNA-methyltransferase [Lyngbya majuscula 3L]
gi|332349601|gb|EGJ29210.1| DNA-methyltransferase [Lyngbya majuscula 3L]
Length = 427
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
++ +LF G GG+ L E + EI+ V T +I DIA +
Sbjct: 81 FRVIELFAGCGGMALGFENA----GLTTKLLVEIDKDCVNTLKLNRPSWEIIPEDIANVD 136
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+ D+ D++ G PCQ FS AG
Sbjct: 137 FTNYKDNVDIVAGGVPCQAFSYAG 160
>gi|268610192|ref|ZP_06143919.1| cytosine-specific DNA methylase [Ruminococcus flavefaciens FD-1]
Length = 475
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+ DLF G+GG + EC ++E N VKTY + GD+ KI
Sbjct: 59 FRFIDLFAGVGGFHQAMRY----LGGECVMAAETNQECVKTYKLNYKIDEKEVRGDVNKI 114
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ I DVL AGFPCQPFS+AG
Sbjct: 115 DPETIAPFDVLCAGFPCQPFSKAG 138
>gi|108562885|ref|YP_627201.1| type II DNA modification enzyme [Helicobacter pylori HPAG1]
gi|107836658|gb|ABF84527.1| type II DNA modification enzyme [Helicobacter pylori HPAG1]
Length = 160
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M K+ D+FCG GG+ H E ++++I+ ++ +YQAN DI ++
Sbjct: 1 MYKVADIFCGAGGLSYGFST---HPYFELIWANDIDKDAILSYQANHKEAQTILCDIMQL 57
Query: 60 KTQDIPD--HDVLLAGFPCQPFSQAG 83
++P D+LL G PCQ +S G
Sbjct: 58 HCHNLPCVPIDILLGGPPCQSYSTLG 83
>gi|239625135|ref|ZP_04668166.1| EaeI methyltransferase alpha subunit [Clostridiales bacterium
1_7_47_FAA]
gi|239519365|gb|EEQ59231.1| EaeI methyltransferase alpha subunit [Clostridiales bacterium
1_7_47FAA]
Length = 301
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ F GIGGI L LE +E + EI + K + ++PN + DI K+
Sbjct: 1 MRAASFFSGIGGIDLGLE----KSGIEIVYQCEILSFGQKVLKKHWPNIPLSQDITKLTG 56
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
+DIPD ++ GFPCQ S A
Sbjct: 57 KDIPDAEIFAGGFPCQDLSLA 77
>gi|200388503|ref|ZP_03215115.1| modification methylase HaeIII [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|199605601|gb|EDZ04146.1| modification methylase HaeIII [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
Length = 361
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
+++ LF G GG+ + + F++++ + KT + DI++I+
Sbjct: 12 IRVLSLFSGCGGMDFGITSA----GGDIVFANDVVENACKTLGNYFPDTDIRHSDISQIQ 67
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ PD D+++ G+PCQ FS AG
Sbjct: 68 SF--PDVDIVVGGYPCQSFSMAG 88
>gi|254285523|ref|ZP_04960487.1| modification methylase Eco47II [Vibrio cholerae AM-19226]
gi|150424385|gb|EDN16322.1| modification methylase Eco47II [Vibrio cholerae AM-19226]
Length = 417
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
K+ +LF G GG+ + +EQ ++ +E++ ++ T +I GDIAK+
Sbjct: 78 YKLVELFAGGGGLAIGMEQA----GLKSILLNEMDKHACNTLRHNRPDWNVIEGDIAKVD 133
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
I + DVL GFPCQ FS AG
Sbjct: 134 FTQIKEEVDVLTGGFPCQAFSYAG 157
>gi|116750223|ref|YP_846910.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB]
gi|116699287|gb|ABK18475.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB]
Length = 399
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI--- 59
++ DLF G GG+ L H + ++++ N Y+V+TY +NF + GDI +
Sbjct: 21 RLIDLFSGAGGMTLGFTSRMGHF-FQPVWANDFNMYAVQTYNSNFGTHCVPGDIVDLLRD 79
Query: 60 KTQDIPDHDVLLAGFPCQPFSQ 81
P +V++ G PCQ FS
Sbjct: 80 PAAAPPRAEVVIGGPPCQGFSL 101
>gi|18202059|sp|O52702|MTA1_ACEPA RecName: Full=Modification methylase ApaLI; Short=M.ApaLI;
AltName: Full=Cytosine-specific methyltransferase ApaLI
gi|2865599|gb|AAC97180.1| ApaLI methyltransferase [Acetobacter pasteurianus]
Length = 429
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ LF G GG Q ++ F +EIN + +TYQ N + D++ +
Sbjct: 7 VVSLFAGAGGFSSGFSQA----GLKPLFGAEINADACQTYQENVGSPCHQLDLSTVDPSH 62
Query: 64 I------PDHDVLLAGFPCQPFSQAG 83
I V++ G PCQ FS AG
Sbjct: 63 IEMLTGGKRPFVVIGGPPCQGFSTAG 88
>gi|1644234|dbj|BAA11339.1| ApaLI methylase [Acetobacter pasteurianus]
Length = 429
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ LF G GG Q ++ F +EIN + +TYQ N + D++ +
Sbjct: 7 VVSLFAGAGGFSSGFSQA----GLKPLFGAEINADACQTYQENVGSPCHQLDLSTVDPSH 62
Query: 64 I------PDHDVLLAGFPCQPFSQAG 83
I V++ G PCQ FS AG
Sbjct: 63 IEMLTGGKRPFVVIGGPPCQGFSTAG 88
>gi|315654951|ref|ZP_07907856.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC
51333]
gi|315490912|gb|EFU80532.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC
51333]
Length = 508
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ LF G GG L +E ++SEI P+ + P GDI I
Sbjct: 5 LRLGSLFDGSGGFPL----AATKVGIEPVWASEIEPFPILVTTTRLPQMQHLGDICDIDG 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ DV+ G PCQ S AG
Sbjct: 61 SQLEPVDVVTFGSPCQDLSVAG 82
>gi|257058000|ref|YP_003135888.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|256588166|gb|ACU99052.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 423
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
L + +LF G GG+ L LE ++ EI+ V T + +I D+ KI
Sbjct: 73 LSVIELFAGCGGMALGLENA----GLKTELLVEIDRDCVNTLQKNRPYWPIIQEDVTKID 128
Query: 61 TQ-DIPDHDVLLAGFPCQPFSQAG 83
+ D++L GFPCQ FS AG
Sbjct: 129 FRSYQGKIDIVLGGFPCQAFSYAG 152
>gi|317127844|ref|YP_004094126.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM
2522]
gi|315472792|gb|ADU29395.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM
2522]
Length = 360
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 1 ML-KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAK 58
M+ ++ DLF G GGI + + NP +V+T+ NF + I DI +
Sbjct: 1 MIPRVIDLFSGCGGISEGFRLA----GFDILGGLDFNPDAVETFHQNFLNSRAICADIQE 56
Query: 59 IKTQDI-------PDHDVLLAGFPCQPFSQA 82
IK +I D DV++ G PCQ FS A
Sbjct: 57 IKNDEITYMFDLTGDIDVIVGGPPCQGFSSA 87
>gi|328947038|ref|YP_004364375.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
gi|328447362|gb|AEB13078.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
Length = 466
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF G+GG L ++ +C F+SE+ Y+ N+
Sbjct: 26 FSFIDLFAGLGGFHLAMQ----KLGGKCVFASELKEDLRILYKENYGIDCFGDINKVDID 81
Query: 62 QDIPD-HDVLLAGFPCQPFSQAG 83
+DIP D+L AGFPCQPFS+AG
Sbjct: 82 KDIPKKFDMLCAGFPCQPFSKAG 104
>gi|222151724|ref|YP_002560880.1| type II modification methyltransferase [Macrococcus caseolyticus
JCSC5402]
gi|222120849|dbj|BAH18184.1| type II modification methyltransferase [Macrococcus caseolyticus
JCSC5402]
Length = 413
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ ++F G+GG R+ LE T N+ E ++++ P + + + I +
Sbjct: 4 IKVAEMFAGVGGFRIGLENTNNNM-FEVTWANQWEPSRKVQHAFDCYSRNFKTGIHSNQD 62
Query: 62 QDIPDH--------DVLLAGFPCQPFSQA 82
+ D+++ GFPCQ +S A
Sbjct: 63 ITEVPNAELAATNVDMIVGGFPCQDYSVA 91
>gi|168821212|ref|ZP_02833212.1| modification methylase HaeIII [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205342142|gb|EDZ28906.1| modification methylase HaeIII [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|320088731|emb|CBY98489.1| C-5 cytosine-specific DNA methylase family protein [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
Length = 361
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
+++ LF G GG+ + + F++++ + KT + GDI++I+
Sbjct: 12 IRVLSLFSGCGGMDFGITSA----GGDIVFANDVVENACKTLGNYFPDTDIRHGDISQIQ 67
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ PD D+++ G+PCQ FS AG
Sbjct: 68 SF--PDVDIVVGGYPCQSFSMAG 88
>gi|172038386|ref|YP_001804887.1| site-specific DNA-methyltransferase [Cyanothece sp. ATCC 51142]
gi|171699840|gb|ACB52821.1| probable site-specific DNA-methyltransferase [Cyanothece sp. ATCC
51142]
Length = 461
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
F G G+ + +EQ + + EI+ Y +T N PN + GDI DI
Sbjct: 74 ISFFSGAMGLDIGIEQA----GFDIKLACEIDKYCRQTIALNKPNIALVGDINSCSADDI 129
Query: 65 ---------PDHDVLLAGFPCQPFSQAG 83
D D+++ G PCQ FS AG
Sbjct: 130 LSYAGLTRSDDIDLIVGGPPCQAFSTAG 157
>gi|317182374|dbj|BAJ60158.1| Type II DNA modification enzyme [Helicobacter pylori F57]
Length = 318
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LEQ ++C +EIN +++TY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLEQ----CRLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD D L++GFPCQ FS G
Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81
>gi|330998524|ref|ZP_08322345.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila
YIT 11841]
gi|329568255|gb|EGG50071.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila
YIT 11841]
Length = 379
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKI 59
M+ ++F G GG+ +E E N + KT P+ + DI
Sbjct: 1 MINSLEIFSGAGGLAKGIEMA----GARHQAFVEWNGDACKTLRWNYSPDIVFETDIRDF 56
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ + DV+ G PCQPFS G
Sbjct: 57 QFSQFSNIDVIAGGPPCQPFSLGG 80
>gi|284051998|ref|ZP_06382208.1| cytosine-specific methyltransferase [Arthrospira platensis str.
Paraca]
gi|79835461|gb|ABB52090.1| Mod [Arthrospira platensis]
gi|291568828|dbj|BAI91100.1| cytosine-specific methyltransferase [Arthrospira platensis
NIES-39]
Length = 411
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 15/90 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIKTQD 63
DLF G GG+ L LE + + E + + + + I GDI+++K+ +
Sbjct: 8 IDLFAGCGGMSLGLEAA----GFDVAVAVEFDAVHCLVHHFNFPYCHTICGDISQVKSAE 63
Query: 64 ----------IPDHDVLLAGFPCQPFSQAG 83
+ D++ G PCQ FS G
Sbjct: 64 ILDQLQLKYGHTEVDLIAGGPPCQGFSHIG 93
>gi|332367371|gb|EGJ45104.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis
SK1059]
Length = 329
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 22/101 (21%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----------VKTYQANFPN 49
++ DLF G GG+ L L +E F+ E N + K +
Sbjct: 14 VMNYIDLFAGSGGLSLGLHNA----GLEGLFAIERNKDAFKTLKFNLIDKRKHFSWPDWL 69
Query: 50 TLIFGDIAKIKTQDI-------PDHDVLLAGFPCQPFSQAG 83
+ DI ++ + D+++ G PCQ FS AG
Sbjct: 70 EMKNWDINELLEEHSENLASLSGKVDLVVGGPPCQGFSMAG 110
>gi|317178577|dbj|BAJ56365.1| Type II DNA modification enzyme [Helicobacter pylori F30]
Length = 318
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LEQ ++C +EIN +++TY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLEQ----CRLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD D L++GFPCQ FS G
Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81
>gi|284052085|ref|ZP_06382295.1| DNA-cytosine methyltransferase [Arthrospira platensis str.
Paraca]
Length = 382
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQD 63
+LF G GG+ LE +E EI+ + T N+ + + DI + +
Sbjct: 7 LELFAGAGGLAKGLEMA----GIEHKALVEIDHNACLTLAGNYKPELIYYVDIRSLNFAE 62
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
D++ G PCQPFS G
Sbjct: 63 FGHIDLISGGPPCQPFSMGG 82
>gi|294678239|ref|YP_003578854.1| cytosine-specific DNA-methyltransferase [Rhodobacter capsulatus
SB 1003]
gi|294477059|gb|ADE86447.1| site-specific DNA-methyltransferase (cytosine-specific)
[Rhodobacter capsulatus SB 1003]
Length = 451
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK DLF G+GG LE C F+SE+N Y+ NF I
Sbjct: 4 LKFADLFAGLGGFHQALE----GLGHTCVFASELNSGLADLYEKNFGIRPHGDIREAID- 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+P HD+L AGFPCQPFS+AG
Sbjct: 59 -DVPPHDILCAGFPCQPFSKAG 79
>gi|291539766|emb|CBL12877.1| DNA-methyltransferase (dcm) [Roseburia intestinalis XB6B4]
Length = 366
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 32/92 (34%), Gaps = 14/92 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----------PNTL 51
DLF G GG+ + + + ++KT++ N N
Sbjct: 5 FTCVDLFSGAGGLSRGFYDA----GYDVVLGVDFDEAALKTFRENHGNAEAMKLDLFNHD 60
Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + DVL+ G PCQ FS AG
Sbjct: 61 NINVIVDFLRERDIKLDVLVGGPPCQGFSIAG 92
>gi|317012898|gb|ADU83506.1| type II DNA modification enzyme [Helicobacter pylori Lithuania75]
Length = 318
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLEQ----CHLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD D L++GFPCQ FS G
Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81
>gi|227875051|ref|ZP_03993196.1| possible DNA-cytosine methyltransferase [Mobiluncus mulieris ATCC
35243]
gi|304390295|ref|ZP_07372248.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|306817338|ref|ZP_07451083.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC
35239]
gi|227844329|gb|EEJ54493.1| possible DNA-cytosine methyltransferase [Mobiluncus mulieris ATCC
35243]
gi|304326051|gb|EFL93296.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304649779|gb|EFM47059.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC
35239]
Length = 468
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF G GG L + ++SEI P+ + P GD+ +
Sbjct: 4 LTLGSLFDGSGGFPL----AGIQAGIRPVWASEIEPFPILVTTRRLPQLTHVGDVTTVNG 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+ DV+ G PCQ S AG
Sbjct: 60 ADVDAVDVITFGSPCQDLSVAG 81
>gi|328946815|gb|EGG40952.1| modification methylase DdeI [Streptococcus sanguinis SK1087]
Length = 387
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 14/97 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN------VECFFSSEINPYSVKTYQANFPN-TLIF 53
M+++ DLF G GG+ + T + F++E N + + ++ N+P T+I
Sbjct: 1 MIEVVDLFSGAGGLTFGFQNTIKNNKFVSRNDFNIRFANEFNHDAAEAFRQNYPRVTMIE 60
Query: 54 GDIAKIKTQ-------DIPDHDVLLAGFPCQPFSQAG 83
DIA I D+++ G PCQ FS G
Sbjct: 61 EDIANIDKHFLKSKGISSKRVDLVIGGPPCQSFSTVG 97
>gi|289167263|ref|YP_003445530.1| type II DNA modification enzyme (methyltransferase
cytosine-specific) [Streptococcus mitis B6]
gi|288906828|emb|CBJ21662.1| type II DNA modification enzyme (methyltransferase
cytosine-specific) [Streptococcus mitis B6]
Length = 387
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 14/97 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN------VECFFSSEINPYSVKTYQANFP-NTLIF 53
M+++ DLF G GG+ + T + F++E N + + ++ N+P T+I
Sbjct: 1 MIEVVDLFSGAGGLTFGFQNTIKNNKFVSRNDFNIRFANEFNHDAAEAFRQNYPGVTMIE 60
Query: 54 GDIAKIKTQ-------DIPDHDVLLAGFPCQPFSQAG 83
DIA I D+++ G PCQ FS G
Sbjct: 61 EDIANIDEHFLKSKGISSKRVDLVIGGPPCQSFSTVG 97
>gi|317177871|dbj|BAJ55660.1| Type II DNA modification enzyme [Helicobacter pylori F16]
Length = 319
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLEQ----CHLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD D L++GFPCQ FS G
Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81
>gi|84497092|ref|ZP_00995914.1| cytosine-specific DNA methylase [Janibacter sp. HTCC2649]
gi|84381980|gb|EAP97862.1| cytosine-specific DNA methylase [Janibacter sp. HTCC2649]
Length = 499
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
DLF GIGG L+ C + SEI+ + +TY N+ + L +
Sbjct: 35 FTYVDLFAGIGGFHAMLDHA----GGRCVYVSEIDREARQTYVRNWVDPLPTAQQPIVNT 90
Query: 61 ----------TQDIPDHDVLLAGFPCQPFSQAG 83
D+P+HDVL AGFPCQPFS++G
Sbjct: 91 DITIATPDDAPVDVPNHDVLAAGFPCQPFSKSG 123
>gi|261838450|gb|ACX98216.1| type II m5C methylase [Helicobacter pylori 51]
Length = 318
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLEQ----CHLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD D L++GFPCQ FS G
Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81
>gi|159029640|emb|CAO87718.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 306
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+ DLF G GG+ L ++ + + ++ Y NF + + D+++
Sbjct: 1 MIT-IDLFAGCGGLSLGFQKA----GFTIVAAFDNWIPAIDVYSNNFSHPIFNVDLSRES 55
Query: 61 TQD---IPDHDVLLAGFPCQPFSQAG 83
Q+ + ++++ PCQ FS AG
Sbjct: 56 NQEILAQYNPEIIVGSPPCQDFSSAG 81
>gi|197105892|ref|YP_002131269.1| DNA (cytosine-5-)-methyltransferase protein [Phenylobacterium
zucineum HLK1]
gi|196479312|gb|ACG78840.1| DNA (cytosine-5-)-methyltransferase protein [Phenylobacterium
zucineum HLK1]
Length = 508
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 18/95 (18%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY----QANFPNTLIFGDIAK 58
++ DLF G GG+ L + + + E +P + ++ P DI +
Sbjct: 34 RVLDLFSGCGGLSLGFH----AQGFDIVAAVEFDPAAAASHGANFHPEDPRHGRPRDITR 89
Query: 59 IKTQD----------IPDHDVLLAGFPCQPFSQAG 83
+ + DVL+ G PCQ F++ G
Sbjct: 90 LTPEQLALELDLGPVEQAVDVLVGGPPCQAFARVG 124
>gi|160939012|ref|ZP_02086363.1| hypothetical protein CLOBOL_03906 [Clostridium bolteae ATCC
BAA-613]
gi|158437975|gb|EDP15735.1| hypothetical protein CLOBOL_03906 [Clostridium bolteae ATCC
BAA-613]
Length = 168
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK+ D FCG GG+ + + E + + + Y+V++Y+AN + + DI ++
Sbjct: 5 LKVNDFFCGCGGMGIAFKNA----GYEIAGAWDFDKYAVESYRANVGDHVQKADIKELHQ 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIP DV GFPCQ S AG
Sbjct: 61 ADIPQADVWAFGFPCQDLSVAG 82
>gi|16331413|ref|NP_442141.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
gi|1001584|dbj|BAA10211.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
Length = 424
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 15/90 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIKTQD 63
DLF G GG+ L LE + + E + + + + I DIA + +
Sbjct: 7 IDLFAGCGGMSLGLEAA----GFDIAAAVEFDAVHCLVHHHNFPYGVTICRDIALVSAGE 62
Query: 64 I----------PDHDVLLAGFPCQPFSQAG 83
I D D++ G PCQ FS G
Sbjct: 63 ILRKLNNKGYSSDIDLIAGGPPCQGFSLMG 92
>gi|326567346|gb|EGE17461.1| type II DNA modification enzyme [Moraxella catarrhalis BC1]
Length = 327
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK D GIG RL LE + C SEI+ S TYQ F + GD+ ++ +
Sbjct: 3 LKFMDFCSGIGAGRLGLENA----GMCCVAHSEIDLNSDLTYQLFFNDYSNLGDLTQLNS 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+PD DV+LAGFPCQ FS G
Sbjct: 59 DDLPDFDVMLAGFPCQTFSIVG 80
>gi|326563801|gb|EGE14052.1| type II DNA modification enzyme [Moraxella catarrhalis 46P47B1]
gi|326566814|gb|EGE16953.1| type II DNA modification enzyme [Moraxella catarrhalis 103P14B1]
gi|326576727|gb|EGE26634.1| type II DNA modification enzyme [Moraxella catarrhalis 101P30B1]
Length = 327
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK D GIG RL LE + C SEI+ S TYQ F + GD+ ++ +
Sbjct: 3 LKFMDFCSGIGAGRLGLENA----GMCCVAHSEIDLNSDLTYQLFFNDYSNLGDLTQLNS 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+PD DV+LAGFPCQ FS G
Sbjct: 59 DDLPDFDVMLAGFPCQTFSIVG 80
>gi|240118874|ref|ZP_04732936.1| DcmB [Neisseria gonorrhoeae PID1]
Length = 325
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIP 65
+F G GG+ L E+ E ++E + T++AN P T I GDI KIK +D P
Sbjct: 1 MFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIKEEDFP 56
Query: 66 DH-DVLLAGFPCQPFSQAG 83
+ D ++ G PCQ +S+AG
Sbjct: 57 EEIDGIIGGPPCQSWSEAG 75
>gi|91205699|ref|YP_538054.1| cytosine-C5 specific DNA methylase-like protein [Rickettsia bellii
RML369-C]
gi|91069243|gb|ABE04965.1| Cytosine-C5 specific DNA methylase-like protein [Rickettsia bellii
RML369-C]
Length = 147
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 38/107 (35%), Gaps = 25/107 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTF-----------------------NHRNVECFFSSEINPY 38
+K+ LF G GG+ L E F E F ++I
Sbjct: 31 IKVISLFSGCGGLDLGFEGNFNIHESCIKDDDFIKSKNGNTVILKDNPFEIVFCNDIMQE 90
Query: 39 S--VKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I ++K +P D+++ GFPCQ FS AG
Sbjct: 91 AKVAWEANFSNKLEYSTKSIRELKGYLLPKADLVIGGFPCQDFSLAG 137
>gi|71909137|ref|YP_286724.1| C-5 cytosine-specific DNA methylase [Dechloromonas aromatica RCB]
gi|71848758|gb|AAZ48254.1| C-5 cytosine-specific DNA methylase [Dechloromonas aromatica RCB]
Length = 571
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DL+ GIGG L LE +E S E + +T N + DI +++ +
Sbjct: 36 RAIDLYSGIGGWSLGLEMA----GIEVVASYEWWDKANRTNHKNNQHLATEIDIRQLRLE 91
Query: 63 DIPDH-DVLLAGFPCQPFSQA 82
D+P + D+++ PC FS A
Sbjct: 92 DLPKNIDIVVGSPPCTQFSFA 112
>gi|240081638|ref|ZP_04726181.1| DcmB [Neisseria gonorrhoeae FA19]
gi|240113919|ref|ZP_04728409.1| DcmB [Neisseria gonorrhoeae MS11]
gi|240116652|ref|ZP_04730714.1| DcmB [Neisseria gonorrhoeae PID18]
gi|240129088|ref|ZP_04741749.1| DcmB [Neisseria gonorrhoeae SK-93-1035]
Length = 325
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIP 65
+F G GG+ L E+ E ++E + T++AN P T I GDI KIK +D P
Sbjct: 1 MFSGCGGLDLGFEKA----GFEIPAANEYDKTIWATFKANHPKTHLIEGDIRKIKEEDFP 56
Query: 66 DH-DVLLAGFPCQPFSQAG 83
+ D ++ G PCQ +S+AG
Sbjct: 57 EEIDGIIGGPPCQSWSEAG 75
>gi|228478395|ref|ZP_04063003.1| modification methylase HaeIII [Streptococcus salivarius SK126]
gi|228250074|gb|EEK09344.1| modification methylase HaeIII [Streptococcus salivarius SK126]
Length = 387
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN------VECFFSSEINPYSVKTYQ-ANFPNTLIF 53
M+++ DLF G GG+ + T + N F++E N + + ++ T+I
Sbjct: 1 MIEVIDLFSGAGGLTFGFQNTIKNNNFVFRNDFNIRFANEFNRDAAEAFRLNYPEITMIE 60
Query: 54 GDIAKIKT-------QDIPDHDVLLAGFPCQPFSQAG 83
DIA I D+++ G PCQ FS G
Sbjct: 61 DDIANIDESFLKSKGISPKGVDLVIGGPPCQSFSTVG 97
>gi|332673919|gb|AEE70736.1| C-5 cytosine-specific DNA methylase [Helicobacter pylori 83]
Length = 319
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLEQ----CHLKCVGHAEINHEALRTYELFFKDTYNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD D L++GFPCQ FS G
Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81
>gi|260910178|ref|ZP_05916855.1| site-specific DNA-methyltransferase [Prevotella sp. oral taxon
472 str. F0295]
gi|260635682|gb|EEX53695.1| site-specific DNA-methyltransferase [Prevotella sp. oral taxon
472 str. F0295]
Length = 403
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ LF GIG E F EIN + + +PN++ + DI
Sbjct: 6 ITHASLFSGIG----APELAATWMGWRNLFHCEINDFCRTILRYWYPNSVSYEDIKTTNF 61
Query: 62 QDI-PDHDVLLAGFPCQPFSQAG 83
++ DVL GFPCQPFS AG
Sbjct: 62 EEWRGRVDVLTGGFPCQPFSAAG 84
>gi|209525992|ref|ZP_03274525.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209493518|gb|EDZ93840.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 430
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 15/90 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIKT-- 61
DLF G GG+ L LE + + E + + + + I DI+K+ +
Sbjct: 20 IDLFAGCGGMSLGLEAA----GFDVAVAVEFDAVHCLVHHFNFPYCHTICRDISKVTSAE 75
Query: 62 --------QDIPDHDVLLAGFPCQPFSQAG 83
D++ G PCQ FS G
Sbjct: 76 ILEQLQLKYQDTQVDLIAGGPPCQGFSHIG 105
>gi|226324849|ref|ZP_03800367.1| hypothetical protein COPCOM_02636 [Coprococcus comes ATCC 27758]
gi|225207297|gb|EEG89651.1| hypothetical protein COPCOM_02636 [Coprococcus comes ATCC 27758]
Length = 473
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 35/109 (32%), Gaps = 32/109 (29%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF--------------- 47
K D F GIGG R +E EC E + ++ +Y +
Sbjct: 4 KFIDWFAGIGGFRRGMELA----GHECVGFCEFDKFATASYISMHLLTDEQRKKLNELPQ 59
Query: 48 -------------PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ ++ DIP D GFPCQ S AG
Sbjct: 60 KKRQKEILKDEYRNGEWYANDVRRVCADDIPKADCWCFGFPCQDISVAG 108
>gi|291460136|ref|ZP_06599526.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417477|gb|EFE91196.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Oribacterium sp. oral taxon 078 str. F0262]
Length = 319
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ LF GIGG+ L E ++ E+ Y + ++P+ + DI +
Sbjct: 1 MNHLSLFSGIGGLDLAAEWA----GIKTVGQCELADYPYSVLEKHWPDVPKWRDIRDLTK 56
Query: 62 QDIPDH------DVLLAGFPCQPFSQAG 83
+ + D++ GFPCQPFS AG
Sbjct: 57 ESFYERTGLRTVDIISGGFPCQPFSFAG 84
>gi|16077674|ref|NP_388488.1| DNA-methyltransferase [Bacillus subtilis subsp. subtilis str.
168]
gi|221308443|ref|ZP_03590290.1| hypothetical protein Bsubs1_03408 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312765|ref|ZP_03594570.1| hypothetical protein BsubsN3_03384 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317688|ref|ZP_03598982.1| hypothetical protein BsubsJ_03343 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321964|ref|ZP_03603258.1| hypothetical protein BsubsS_03414 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|81669152|sp|O34680|YDIP_BACSU RecName: Full=Probable BsuMI modification methylase subunit ydiP;
Short=M2.BsuMI; AltName: Full=Cytosine-specific
methyltransferase M2.BsuMI
gi|2521998|dbj|BAA22751.1| ydiP [Bacillus subtilis]
gi|2632920|emb|CAB12426.1| DNA-methyltransferase (cytosine-specific) [Bacillus subtilis
subsp. subtilis str. 168]
Length = 389
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GIGGI L L Q+ + + E++P + NFP I DI +I
Sbjct: 1 MKVVSLFSGIGGIELGLHQSGHTTEI----FCEVDPLAKAVLSKNFPGVKIEDDINEI-- 54
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+++P D++ AGFPCQ SQAG
Sbjct: 55 RELPSCDLVAAGFPCQDLSQAG 76
>gi|308062397|gb|ADO04285.1| type II DNA modification enzyme [Helicobacter pylori Cuz20]
Length = 318
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LEQ ++C +EIN +++TY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLEQ----CRLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD D L++GFPCQ FS G
Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81
>gi|302876802|ref|YP_003845435.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|307687485|ref|ZP_07629931.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|302579659|gb|ADL53671.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
Length = 363
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 33/92 (35%), Gaps = 14/92 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----------PNTL 51
DLF G GG+ + + + ++KT++AN N
Sbjct: 5 FTCVDLFSGAGGLSRGFYDA----GYDVVLGVDFDDAALKTFKANHGTAESMKLDLFNHD 60
Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + DVL+ G PCQ FS AG
Sbjct: 61 NIDVIVDYLAEKNIQLDVLVGGPPCQGFSIAG 92
>gi|188527903|ref|YP_001910590.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi470]
gi|188144143|gb|ACD48560.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi470]
gi|308063905|gb|ADO05792.1| type II DNA modification enzyme [Helicobacter pylori Sat464]
Length = 320
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LEQ ++C +EIN +++TY+ F +T FGD+ +IK
Sbjct: 5 ILTFMDFCSGIGGGRLGLEQ----CRLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIK 60
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD D L++GFPCQ FS G
Sbjct: 61 PNDLPDFDALISGFPCQAFSING 83
>gi|317132209|ref|YP_004091523.1| DNA-cytosine methyltransferase [Ethanoligenens harbinense YUAN-3]
gi|315470188|gb|ADU26792.1| DNA-cytosine methyltransferase [Ethanoligenens harbinense YUAN-3]
Length = 438
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKI 59
DLFCG GG+ + LEQ + + + + ++I DI +I
Sbjct: 62 FIDLFCGAGGLSVGLEQ----EGFRPVAAVDKDQSAVLTYRFNRPWLTDGSIIHEDIREI 117
Query: 60 KTQD-IPDHDVLLAGFPCQPFSQ 81
QD P V++ G PCQ FS
Sbjct: 118 VNQDIFPHVPVVVGGPPCQGFSV 140
>gi|108805045|ref|YP_644982.1| DNA (cytosine-5-)-methyltransferase [Rubrobacter xylanophilus DSM
9941]
gi|108766288|gb|ABG05170.1| DNA (cytosine-5-)-methyltransferase [Rubrobacter xylanophilus DSM
9941]
Length = 405
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 17/93 (18%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
DLF G GG+ L + + +++++ ++ TY+ N + ++ GDI + D
Sbjct: 152 FADLFSGAGGLSLGFQWA----GWQPVVANDVDEAALLTYRDNIHDVIVLGDIREHHVID 207
Query: 64 -------------IPDHDVLLAGFPCQPFSQAG 83
+L G PCQ FS AG
Sbjct: 208 AIIQKCEEARDASPNMPFFVLGGPPCQGFSTAG 240
>gi|332710136|ref|ZP_08430089.1| DNA-methyltransferase [Lyngbya majuscula 3L]
gi|332351094|gb|EGJ30681.1| DNA-methyltransferase [Lyngbya majuscula 3L]
Length = 370
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
L T LF G GG+ + E + +S++I+ +SVKT + DI ++
Sbjct: 3 LSFTSLFSGAGGLDIGFEMA----GFQHLYSTDIDTWSVKTLRNNRPEWDVEEADIRELS 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+D+PD DV+LAG PCQ FS G
Sbjct: 59 ERDLPDSDVILAGVPCQGFSLGG 81
>gi|293369629|ref|ZP_06616207.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC
3f]
gi|292635333|gb|EFF53847.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC
3f]
Length = 296
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + +LF GIGG LE + + SEI+ +++ ++ NFP G + I
Sbjct: 1 MVLLELFSGIGGFSKGLEAAGYT--FDKVYFSEIDKHAIANFKYNFPYAEHIGTVTNIGE 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
I ++ G PCQ FS G
Sbjct: 59 VGIERPHIVTFGSPCQNFSAIG 80
>gi|189459597|ref|ZP_03008382.1| hypothetical protein BACCOP_00223 [Bacteroides coprocola DSM 17136]
gi|189433679|gb|EDV02664.1| hypothetical protein BACCOP_00223 [Bacteroides coprocola DSM 17136]
Length = 387
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 16/94 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------- 50
+ DLF G GG+ + + ++EI+ + T + N
Sbjct: 137 MNFVDLFAGCGGMSEGFIMS----GFQLIAANEIDKSIMATNRYNHSQYAPAENFILGDI 192
Query: 51 -LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ +V++ G PCQ FS AG
Sbjct: 193 TQEETKARIMEACGNTPVNVVVGGPPCQGFSYAG 226
>gi|313674498|ref|YP_004052494.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
gi|312941196|gb|ADR20386.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
Length = 735
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 32/96 (33%), Gaps = 14/96 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV-ECFFSSEINPYS------VKTYQANFPNTLIFG 54
D F G GG Q ++ +S+IN +Q I
Sbjct: 119 FTFVDFFAGAGGFSEGFLQAEHNNKFFNFLLASDINENCELTHLVRYNHQLGLDAEFIKQ 178
Query: 55 DIAKIKTQDI-------PDHDVLLAGFPCQPFSQAG 83
DI + D + DV+ G PCQ FS AG
Sbjct: 179 DITEPDFVDNLLSKLGDKNVDVVCGGPPCQSFSLAG 214
>gi|322372404|ref|ZP_08046940.1| modification methylase DdeI [Streptococcus sp. C150]
gi|321277446|gb|EFX54515.1| modification methylase DdeI [Streptococcus sp. C150]
Length = 387
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN------VECFFSSEINPYSVKTYQ-ANFPNTLIF 53
M+++ DLF G GG+ + T + N F++E N + + ++ T+I
Sbjct: 1 MIEVIDLFSGAGGLTFGFQNTIKNNNFVFRNDFNIRFANEFNRDAAEAFRLNYPKITMIE 60
Query: 54 GDIAKIKT-------QDIPDHDVLLAGFPCQPFSQAG 83
DIA I D+++ G PCQ FS G
Sbjct: 61 DDIANIDESFLKSKGISSKGVDLVIGGPPCQSFSTVG 97
>gi|86137701|ref|ZP_01056277.1| DNA modification methylase M.NGOI [Roseobacter sp. MED193]
gi|85825293|gb|EAQ45492.1| DNA modification methylase M.NGOI [Roseobacter sp. MED193]
Length = 319
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML +L G GG L LE+ + EI+ + T + N PN + + ++
Sbjct: 1 MLTSVELCAGAGGQALGLERA----GFDHTALVEIDKHCCATLRHNRPNWNVLEEDLRLF 56
Query: 61 TQD---IPDHDVLLAGFPCQPFSQAG 83
D D+L G PC PFS AG
Sbjct: 57 KDDASAYKGIDLLAGGLPCPPFSVAG 82
>gi|254450593|ref|ZP_05064030.1| modification methylase FnuDI [Octadecabacter antarcticus 238]
gi|198264999|gb|EDY89269.1| modification methylase FnuDI [Octadecabacter antarcticus 238]
Length = 365
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60
+K LF G GG+ ++ + F++++ Y+ +T++ F +T DI +I
Sbjct: 1 MKTISLFSGCGGMDFGIKAA----GCDVVFANDVMKYAAETHRKYFKDTDFIHGDIREI- 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ P D+++ G+PCQ FS G
Sbjct: 56 -SNFPSTDLVVGGYPCQSFSMGG 77
>gi|161528981|ref|YP_001582807.1| DNA-cytosine methyltransferase [Nitrosopumilus maritimus SCM1]
gi|160340282|gb|ABX13369.1| DNA-cytosine methyltransferase [Nitrosopumilus maritimus SCM1]
Length = 360
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQ 62
+ DLF G GG+ L + + + E + + +TY NF T I DI IK+
Sbjct: 8 VIDLFAGSGGLSLGFKNA----GFKVIAAVEFDKSAAETYSKNFKETKLIVDDIKNIKSN 63
Query: 63 D-----IPDHDVLLAGFPCQPFSQA 82
+ + ++ G PCQP+S A
Sbjct: 64 ELKKITSKERFCVIGGPPCQPYSNA 88
>gi|167046802|ref|YP_001661472.1| DNA methyltransferase [Acinetobacter venetianus]
gi|83833711|gb|ABC47668.1| DNA methyltransferase [Acinetobacter venetianus]
Length = 737
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 31/89 (34%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV-KTYQANFPNTLIFGDIAKIK 60
L LF G GG+ + ++ C +S+I + DI +I
Sbjct: 8 LNFISLFTGAGGLDIGFKEA----GHNCLLASDIMKEAELTYSYNYPSVPFFREDIRQIP 63
Query: 61 TQDIPDH------DVLLAGFPCQPFSQAG 83
DV++ G PCQ FS G
Sbjct: 64 LDKFKKVIGDKEVDVIIGGPPCQGFSNMG 92
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------F 53
L+ DLF G+GG L+ ++C ++ + Y+V+ Y+ N +
Sbjct: 371 LRFADLFSGVGGFTEGLKSA----GLDCILGADFDRYAVEAYRKNHTDHECLEADLSDEE 426
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+++ G PCQ FS G
Sbjct: 427 IQHNIAMRLKEQKVDLVVGGPPCQGFSIFG 456
>gi|209525305|ref|ZP_03273847.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209494320|gb|EDZ94633.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 342
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLF G GG L + E E+ + TY N + + I
Sbjct: 27 VLDLFAGCGGFSLGFKAA----GFETIGY-EMLADAAATYTRNLQDICYCQTLE-IGQDL 80
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
DV++ G PCQPFS G
Sbjct: 81 CNHPDVIIGGPPCQPFSVGG 100
>gi|218244975|ref|YP_002370346.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|218165453|gb|ACK64190.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
Length = 423
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
L + +LF G GG+ L LE ++ EI+ V T Q N P I D+ KI
Sbjct: 73 LSVIELFAGCGGMALGLENA----GLKTELLVEIDRDCVNTLQKNRPYWPILQEDVTKID 128
Query: 61 TQ-DIPDHDVLLAGFPCQPFSQAG 83
+ D++ GFPCQ FS AG
Sbjct: 129 FRSYQGKIDIVSGGFPCQAFSYAG 152
>gi|53712640|ref|YP_098632.1| site-specific DNA-methyltransferase (cytosine-specific)
[Bacteroides fragilis YCH46]
gi|52215505|dbj|BAD48098.1| site-specific DNA-methyltransferase (cytosine-specific)
[Bacteroides fragilis YCH46]
Length = 296
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + +LF GIGG LE + + SEI+ +++ ++ NFP G + I
Sbjct: 1 MVLLELFSGIGGFSKGLEAAGYT--FDKVYFSEIDKHAIANFKYNFPYAEHIGTVTNIGE 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
I ++ G PCQ FS G
Sbjct: 59 VGIERPHIVTFGSPCQNFSAIG 80
>gi|257386518|ref|YP_003176291.1| DNA-cytosine methyltransferase [Halomicrobium mukohataei DSM
12286]
gi|257168825|gb|ACV46584.1| DNA-cytosine methyltransferase [Halomicrobium mukohataei DSM
12286]
Length = 452
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L DLFCG GG+ L E + + + TY+AN + GDI + +
Sbjct: 6 LTAIDLFCGAGGLSQGLHDA----GFETLWGIDHEENTKPTYEANHDCEMTVGDIREEEP 61
Query: 62 QD----IPDHDVLLAGFPCQPFSQAG 83
D + D++ G PC FS G
Sbjct: 62 PDLGLEEGELDLVAGGPPCPTFSLVG 87
>gi|314994131|ref|ZP_07859441.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
TX0133B]
gi|313591449|gb|EFR70294.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
TX0133B]
Length = 130
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+ DLF GIGG L +EQ +C EI+ ++ ++Y+A +
Sbjct: 1 MTFLDLFAGIGGFCLGMEQA----GHQCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q + D+L GFPCQ FS AG
Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83
>gi|317055417|ref|YP_004103884.1| DNA-cytosine methyltransferase [Ruminococcus albus 7]
gi|315447686|gb|ADU21250.1| DNA-cytosine methyltransferase [Ruminococcus albus 7]
Length = 543
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K+ DLF G GG+ L QT E + E NP KTY+ N P + GD+
Sbjct: 4 YKVVDLFAGAGGLSLGFVQTKK---YEIKVAFENNPNMQKTYRRNHPKVDVRGDVCAADY 60
Query: 62 QD----IPDHDVLLAGFPCQPFSQA 82
+ DV++ G PCQ FS A
Sbjct: 61 SEIKRKYGTIDVVIGGPPCQGFSNA 85
>gi|319639604|ref|ZP_07994351.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
gi|317399175|gb|EFV79849.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
Length = 348
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 11/88 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLFCG GG+ L Q + + ++ TY A T T
Sbjct: 9 TVLDLFCGCGGLSLGFIQA----GFDVKLGIDYWQDAITTYTATHKGTQGIVADLFNITP 64
Query: 63 DI-------PDHDVLLAGFPCQPFSQAG 83
+ DV++ G PCQ FS AG
Sbjct: 65 EQISQQTQIKQLDVIIGGPPCQGFSIAG 92
>gi|254876424|ref|ZP_05249134.1| predicted protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254842445|gb|EET20859.1| predicted protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 458
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 35/114 (30%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTL 51
M+K DLF G GG+ L + F+ E +P + +T+ NF +
Sbjct: 1 MMKYIDLFAGCGGLSLGF----KSEGFDLLFAVEKSPMAAETFYHNFIEKINDNIEWSKY 56
Query: 52 IFGDIAKIKT----------------------QDIPDHDVLLAGFPCQPFSQAG 83
+ I + I + D+++ G PCQ FS AG
Sbjct: 57 LNKSIEEQLDSKLFVGETLTLLEKPQLLKKLKTKIGELDLIVGGPPCQGFSLAG 110
>gi|320007884|gb|ADW02734.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC
33331]
Length = 660
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63
DLF G GG+ L LE+ + + + +++T+ ANFP + D+ +D
Sbjct: 45 VDLFSGAGGLSLGLERA----GWTVAAAVDFDQRALRTHAANFPGMSLHMDLGNPDERDR 100
Query: 64 ------IPDHDVLLAGFPCQPFSQAG 83
D++ G PCQPFS+AG
Sbjct: 101 LVEMLAPAKIDLVAGGPPCQPFSRAG 126
>gi|158335733|ref|YP_001516905.1| DNA-cytosine methyltransferase [Acaryochloris marina MBIC11017]
gi|158305974|gb|ABW27591.1| DNA-cytosine methyltransferase [Acaryochloris marina MBIC11017]
Length = 397
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60
L +LF G GG+ LE+ V+ E N + T N+ + DI K
Sbjct: 4 LSCLELFTGAGGLAKGLEKA----GVQHTAFVEWNKDACITLANNYSAQLVHNVDIRTFK 59
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D++ G PCQPFS G
Sbjct: 60 FSQFGHVDIVSGGPPCQPFSMGG 82
>gi|302870498|ref|YP_003839135.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC
27029]
gi|302573357|gb|ADL49559.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC
27029]
Length = 383
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
+F G GG+ L EQT ++++I P++V+TY+ N ++ DIA++ D+
Sbjct: 11 VSMFSGCGGMDLGAEQTKRVG---VVWANDIEPWAVETYRRNLGRHIVAEDIAELDVPDV 67
Query: 65 PDHDVLLAGFPCQPFSQ 81
P D+LLAG PCQ +S
Sbjct: 68 P-CDILLAGPPCQDYST 83
>gi|312142618|ref|YP_003994064.1| DNA-cytosine methyltransferase [Halanaerobium sp. 'sapolanicus']
gi|311903269|gb|ADQ13710.1| DNA-cytosine methyltransferase [Halanaerobium sp. 'sapolanicus']
Length = 406
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI---------- 52
+ +LF G+GG RL LE++ + + ++ P +
Sbjct: 4 TVCELFAGVGGFRLGLEKSSEE--WKTVWMNQWEPTRKSQWAYECYIENFGKDKAINLFS 61
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
DI+++ T IPDH++L+ GFPCQ +S A
Sbjct: 62 NTDISEVDTSVIPDHNLLVGGFPCQDYSVA 91
>gi|291165856|gb|EFE27903.1| modification methylase EcoRII [Filifactor alocis ATCC 35896]
Length = 375
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAK 58
+ DL GIGGIR E T + + ++EI+ Y+ TYQ +
Sbjct: 2 LFTTIDLCAGIGGIRKGFELTGH---FKNLVAAEIDRYACLTYQHLYGEDADNDLTSEEF 58
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +DVLLAGFPCQ FS+AG
Sbjct: 59 KTALEGLHYDVLLAGFPCQTFSRAG 83
>gi|153868905|ref|ZP_01998633.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
gi|152074513|gb|EDN71359.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
Length = 418
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 13/86 (15%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---------TLIFGD 55
DLF G GG+ LE F++EI P TY+ N PN +
Sbjct: 34 VDLFAGAGGLSCGLEMA----GFHPLFANEIEPVYANTYKHNHPNTDLVIGDVRQMCAST 89
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ + + D+L G PCQ FS
Sbjct: 90 LRERLGVKQGEIDLLAGGPPCQGFSI 115
>gi|208435018|ref|YP_002266684.1| type II DNA modification enzyme [Helicobacter pylori G27]
gi|208432947|gb|ACI27818.1| type II DNA modification enzyme [Helicobacter pylori G27]
Length = 318
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLEQ----CHLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD D L++GFPCQ FS G
Sbjct: 59 PNDLPDFDALVSGFPCQAFSING 81
>gi|325845888|ref|ZP_08169086.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481794|gb|EGC84826.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 434
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 16/97 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQ----------TFNHRNVECFFSSEINPYSV------KTYQA 45
L + +LF G+GG R+ L + + + + ++++ P + +
Sbjct: 3 LTVVELFAGVGGFRVGLNKVTNFDEKSGKAIENGDWKFLWANQWEPSTKSQPAFECYSKR 62
Query: 46 NFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ DI K+ + IP+H++L+ GFPCQ +S A
Sbjct: 63 FNESMNSNIDINKVNKESIPNHNLLVGGFPCQDYSVA 99
>gi|308184861|ref|YP_003928994.1| type II DNA modification enzyme [Helicobacter pylori SJM180]
gi|308060781|gb|ADO02677.1| type II DNA modification enzyme [Helicobacter pylori SJM180]
Length = 318
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LE +++C +EIN ++KTY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLE----RCHLKCVGHAEINHEALKTYELFFKDTHNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD D L++GFPCQ FS G
Sbjct: 59 PNDLPDFDALVSGFPCQAFSING 81
>gi|304383358|ref|ZP_07365824.1| site-specific DNA-methyltransferase [Prevotella marshii DSM
16973]
gi|304335526|gb|EFM01790.1| site-specific DNA-methyltransferase [Prevotella marshii DSM
16973]
Length = 478
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 1 MLKIT---DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA 57
M + LF GIG E + F EI+ + +PN++ + +I
Sbjct: 1 MKRFIMHASLFSGIG----APELAAFWLGWQNVFHCEISEFCNTILNYWYPNSIGYENIK 56
Query: 58 KIKTQDI-PDHDVLLAGFPCQPFSQAG 83
+ DVL GFPCQPFS AG
Sbjct: 57 QADFSKWQGKIDVLTGGFPCQPFSSAG 83
>gi|326564851|gb|EGE15057.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 103P14B1]
Length = 288
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 9/86 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61
I LF GIGG + E+ + EINP FP+ F D+
Sbjct: 15 TIGSLFAGIGGFDVGFEKA----GFHTSWQVEINPVCRAVLSDRFPHAKQFADVKTCLPE 70
Query: 62 ----QDIPDHDVLLAGFPCQPFSQAG 83
+ DV+ GFPCQ S AG
Sbjct: 71 LLSLPNGGQVDVIAGGFPCQDVSVAG 96
>gi|295100151|emb|CBK89240.1| DNA-methyltransferase (dcm) [Eubacterium cylindroides T2-87]
Length = 405
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 14/92 (15%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI---------- 52
I +LF G+GG RL E+ + + S+ P + +
Sbjct: 4 TICELFAGVGGFRLGFERA--DSGWKTTWFSQWEPGARTQWANQCYVQHFGDSPDINGEF 61
Query: 53 --FGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
DI+ + IPDH +L+ GFPCQ +S A
Sbjct: 62 HTCEDISTVDKNAIPDHTLLVGGFPCQDYSVA 93
>gi|237739124|ref|ZP_04569605.1| C-5 cytosine-specific DNA methylase [Fusobacterium sp. 2_1_31]
gi|229423724|gb|EEO38771.1| C-5 cytosine-specific DNA methylase [Fusobacterium sp. 2_1_31]
Length = 361
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
LK +LF G GG+ L +E+ EI+ + T + N PN +
Sbjct: 29 LKAIELFAGAGGLALGVEKA----GFNTIGLIEIDKNACNTLKLNRPNWNVINENIANIS 84
Query: 55 --DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ + + D+L G PCQ FS AG
Sbjct: 85 LKNLEDFFSIKKGELDLLSGGAPCQAFSYAG 115
>gi|223937258|ref|ZP_03629164.1| DNA-cytosine methyltransferase [bacterium Ellin514]
gi|223894043|gb|EEF60498.1| DNA-cytosine methyltransferase [bacterium Ellin514]
Length = 408
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 12/91 (13%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--------I 52
+L+ +LF G GG+ + L + E N ++ +T + N N
Sbjct: 7 ILRSLELFAGAGGLAIGLHHA----GFKPRALVEFNRHACETLRFNADNGFETLNGAKLF 62
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
GD+ ++ +I DV+ G PCQPFS G
Sbjct: 63 AGDVREVDFAEIDAVDVVTGGPPCQPFSIGG 93
>gi|288927044|ref|ZP_06420936.1| site-specific DNA-methyltransferase [Prevotella buccae D17]
gi|288336182|gb|EFC74571.1| site-specific DNA-methyltransferase [Prevotella buccae D17]
Length = 385
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ LF GIG E + + F EI + K + FPN++ + DI K
Sbjct: 5 ITHASLFSGIG----APELAAHWMGWKNLFHCEIQEFQRKVLEYWFPNSVSYEDITKTDF 60
Query: 62 QDI-PDHDVLLAGFPCQPFSQAG 83
+ D+L GFPCQPFS AG
Sbjct: 61 TEWRGKVDILTGGFPCQPFSVAG 83
>gi|50365124|ref|YP_053549.1| modification methylase Sau3AI (GATC cytosine-specific
methyltransferase) [Mesoplasma florum L1]
gi|50363680|gb|AAT75665.1| modification methylase Sau3AI (GATC cytosine-specific
methyltransferase) [Mesoplasma florum L1]
Length = 404
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY------QANFPNTLIFGD 55
+K+ +LF G+GG L L+++ + E FS++ P + + + + L D
Sbjct: 5 IKVVELFAGVGGFSLALKKSKGN--YEVIFSNQWEPSTKNQFAFNALNKNFKKHILSNED 62
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
I K + D D+L+ GFPCQ +S A
Sbjct: 63 IQFAKEKLPNDFDLLVGGFPCQDYSVA 89
>gi|242237482|ref|YP_002985663.1| DNA-cytosine methyltransferase [Dickeya dadantii Ech703]
gi|242129539|gb|ACS83841.1| DNA-cytosine methyltransferase [Dickeya dadantii Ech703]
Length = 465
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63
F G G+ L +E+ + + EI+ Y +T N P+ + DI D
Sbjct: 78 LSFFSGAMGLDLGIEKA----GFDIRLACEIDKYCRQTISLNKPDIALLSDINDYSAMDI 133
Query: 64 --------IPDHDVLLAGFPCQPFSQAG 83
D D+++ G PCQ FS AG
Sbjct: 134 IKAAKISPDTDIDLVMGGPPCQAFSTAG 161
>gi|126658774|ref|ZP_01729918.1| site-specific DNA-methyltransferase [Cyanothece sp. CCY0110]
gi|126619872|gb|EAZ90597.1| site-specific DNA-methyltransferase [Cyanothece sp. CCY0110]
Length = 461
Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
F G G+ L +EQT + + EI+ Y +T N PN + GDI DI
Sbjct: 74 ISFFSGAMGLDLGIEQT----GFDIKLACEIDKYCRQTITLNKPNIALVGDINSYSADDI 129
Query: 65 ---------PDHDVLLAGFPCQPFSQAG 83
D D+++ G PCQ FS AG
Sbjct: 130 LSYAGLTRSDDIDLIVGGPPCQAFSTAG 157
>gi|298286911|sp|P13906|MTB1_BACSH RecName: Full=Modification methylase BspRI; Short=M.BspRI; AltName:
Full=Cytosine-specific methyltransferase BspRI
gi|258593908|emb|CAA33764.2| DNA(cytosine-5)methyltransferase [Lysinibacillus sphaericus]
Length = 424
Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 24/106 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN------------------------VECFFSSEINP 37
+ LFCG GG+ L E ++ ++++I
Sbjct: 58 FNVLSLFCGAGGLDLGFELAGLEQSLGTDKALEAFKDRDVYNAIRHESVFHTVYANDIFS 117
Query: 38 YSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+++TY+ N PN + + K ++ P ++++ GFPC FS+AG
Sbjct: 118 EALQTYEKNMPNHVFIHEKDIRKIKEFPSANLVIGGFPCPGFSEAG 163
>gi|632681|gb|AAB31678.1| DNA (cytosine-5)-methyltransferase, m5C-MTase {BspRI
restriction-modification system} [Escherichia coli,
Peptide, 424 aa]
Length = 424
Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 24/106 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN------------------------VECFFSSEINP 37
+ LFCG GG+ L E ++ ++++I
Sbjct: 58 FNVLSLFCGAGGLDLGFELAGLEQSLGTDKALEAFKDRDVYNAIRHESVFHTVYANDIFS 117
Query: 38 YSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+++TY+ N PN + + K ++ P ++++ GFPC FS+AG
Sbjct: 118 EALQTYEKNMPNHVFIHEKDIRKIKEFPSANLVIGGFPCPGFSEAG 163
>gi|78776322|ref|YP_392637.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM
1251]
gi|78496862|gb|ABB43402.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM
1251]
Length = 395
Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 31/113 (27%)
Query: 2 LKITDLFCGIGGIRLDLEQTF-----------------------NHRNVECFFSSEINPY 38
+K+ F G GG+ + E F E F+ +I
Sbjct: 4 IKVASFFSGCGGLDIGFEGDFETNSTSIRNKSWIQNTNEKKCKVKKTTFETVFACDIKKS 63
Query: 39 SVKTYQANFPNTLIFGD------IAKIKTQDI--PDHDVLLAGFPCQPFSQAG 83
+ +++ F +F I K + P D++ GFPCQ FS AG
Sbjct: 64 AKIAWESYFKKENVFHLESIVDLIKKAHNNEFIFPHADIVTGGFPCQDFSIAG 116
>gi|67922668|ref|ZP_00516173.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH
8501]
gi|67855516|gb|EAM50770.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH
8501]
Length = 282
Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------NTLIFGD 55
+ DLF G GG+ +Q E + ++ T+Q N P L
Sbjct: 7 YSLLDLFSGCGGLSYGFQQA----GFEVIAGIDNWKDALATFQKNHPTSQGILMDLAVAS 62
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+KI Q DV++ G PCQ FS +G
Sbjct: 63 SSKISQQINKSIDVIVGGPPCQGFSISG 90
>gi|70725582|ref|YP_252496.1| hypothetical protein SH0581 [Staphylococcus haemolyticus
JCSC1435]
gi|68446306|dbj|BAE03890.1| shlA1M [Staphylococcus haemolyticus JCSC1435]
Length = 412
Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------TLIFGD 55
LK+ +LF G+GG RL LE T + ++++ P + + N + D
Sbjct: 4 LKVAELFAGVGGFRLGLENTKEKI-FDVTWANQWEPSKKIQHAFDCYNSRFITGEHVNKD 62
Query: 56 IAKIKTQD--IPDHDVLLAGFPCQPFSQA 82
IA I ++ D+++ GFPCQ +S A
Sbjct: 63 IALISDEEIANTKADMVVGGFPCQDYSVA 91
>gi|317495998|ref|ZP_07954360.1| DNA-cytosine methyltransferase [Gemella moribillum M424]
gi|316913902|gb|EFV35386.1| DNA-cytosine methyltransferase [Gemella moribillum M424]
Length = 415
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 16/97 (16%)
Query: 2 LKITDLFCGIGGIRLDLE----------QTFNHRNVECFFSSEINPYSVKTYQANFPNT- 50
L + +LF G+GG R+ L ++++ P + + +
Sbjct: 3 LDVVELFAGVGGFRVGLNNITDFRKKDGCAIEKNGWNFVWANQYEPSTKAQHAFECYSKR 62
Query: 51 -----LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
DI K+ + IP+H +L+ GFPCQ +S A
Sbjct: 63 FQIGECSNEDINKVDKKTIPNHSLLVGGFPCQDYSVA 99
>gi|257062089|ref|YP_003139977.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|256592255|gb|ACV03142.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 456
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----VKTYQANFPNTLIFGDI 56
DLF GIGG R+ LEQ +C SEI+ + + + + GDI
Sbjct: 28 FTFIDLFSGIGGFRIPLEQ----LGGKCLGYSEIDTEAIKVYRRNFIRYSNRDETYLGDI 83
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ DV++ G PCQP+S AG
Sbjct: 84 TQLNQIPFK-VDVIVGGVPCQPWSIAG 109
>gi|254883949|ref|ZP_05256659.1| site-specific DNA methylase [Bacteroides sp. 4_3_47FAA]
gi|254836742|gb|EET17051.1| site-specific DNA methylase [Bacteroides sp. 4_3_47FAA]
Length = 420
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF G+ ++ L++ E +++SEI+ ++++ Q NFP+T+ GD+ ++
Sbjct: 1 MKVLSLFDGMSCGQIALKRLGIRT--ETYYASEIDRHAIRQTQLNFPDTIQLGDVTQVDV 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ + D+L+ G PCQ FS AG
Sbjct: 59 RQLEPIDLLIGGSPCQSFSFAG 80
>gi|218249004|ref|YP_002374375.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|218169482|gb|ACK68219.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
Length = 456
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----VKTYQANFPNTLIFGDI 56
DLF GIGG R+ LEQ +C SEI+ + + + + GDI
Sbjct: 28 FTFIDLFSGIGGFRIPLEQ----LGGKCLGYSEIDTEAIKVYRRNFIRYSNRDETYLGDI 83
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ DV++ G PCQP+S AG
Sbjct: 84 TQLNQIPFK-VDVIVGGVPCQPWSIAG 109
>gi|291570812|dbj|BAI93084.1| cytosine-specific DNA methyltransferase [Arthrospira platensis
NIES-39]
Length = 443
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---K 58
DLF GIGG R+ LE + +C SEI P S++ YQ NF +
Sbjct: 15 FTFVDLFSGIGGFRIALE----NWGGQCLGYSEIEPNSIQVYQHNFIRYANRDEPNLGDM 70
Query: 59 IKTQDIPDH-DVLLAGFPCQPFSQAG 83
P D++ G PCQP+S AG
Sbjct: 71 RSLHKFPFTVDLITGGVPCQPWSIAG 96
>gi|284051619|ref|ZP_06381829.1| DNA-cytosine methyltransferase [Arthrospira platensis str.
Paraca]
Length = 443
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---K 58
DLF GIGG R+ LE + +C SEI P S++ YQ NF +
Sbjct: 15 FTFVDLFSGIGGFRIALE----NWGGQCLGYSEIEPNSIQVYQHNFIRYANRDEPNLGDM 70
Query: 59 IKTQDIPDH-DVLLAGFPCQPFSQAG 83
P D++ G PCQP+S AG
Sbjct: 71 RSLHKFPFTVDLITGGVPCQPWSIAG 96
>gi|9858807|gb|AAG01143.1|AF283660_1 BsrFI methylase [Geobacillus stearothermophilus]
Length = 389
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 12/89 (13%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAK 58
M+K+ LF G G + L + + +EI P +++ N I
Sbjct: 1 MIKVASLFSGAGFLDLGFT----ENGFDIVWGAEIVPEFARSHNYNMRLRYNHDIDRIHT 56
Query: 59 IKTQDIPDHDV------LLAGFPCQPFSQ 81
+ ++ D+ ++ G PCQ FS
Sbjct: 57 VDIVNVSPMDIPQNIRGIIGGPPCQDFSI 85
>gi|79835495|gb|ABB52098.1| Mod [Arthrospira platensis]
Length = 412
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---K 58
DLF GIGG R+ LE + +C SEI P S++ YQ NF +
Sbjct: 15 FTFVDLFSGIGGFRIALE----NWGGQCLGYSEIEPNSIQVYQHNFIRYANRDEPNLGDM 70
Query: 59 IKTQDIPDH-DVLLAGFPCQPFSQAG 83
P D++ G PCQP+S AG
Sbjct: 71 RSLHKFPFTVDLITGGVPCQPWSIAG 96
>gi|268680630|ref|YP_003305061.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM
6946]
gi|268618661|gb|ACZ13026.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM
6946]
Length = 398
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 31/113 (27%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN-----------------------HRNVECFFSSEINPY 38
LK+ F G GG+ L LE F + F+ +I P
Sbjct: 4 LKVVSFFSGCGGLDLGLEGDFWVKAKSVKDKTWIKERHKNFVKLAPTAFQTVFACDIKPS 63
Query: 39 SVKTYQANFPNTLIFGDIAKIK--------TQDIPDHDVLLAGFPCQPFSQAG 83
+ K ++ F +F + ++ T P+ DV+ GFPCQ FS AG
Sbjct: 64 AKKAWEYYFQRDNVFHLESIVELVKKAKEGTFTFPNADVVTGGFPCQDFSVAG 116
>gi|126660265|ref|ZP_01731380.1| putative DNA modification methylase (N.MgoV) [Cyanothece sp.
CCY0110]
gi|126618440|gb|EAZ89194.1| putative DNA modification methylase (N.MgoV) [Cyanothece sp.
CCY0110]
Length = 458
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
D F GIGG R+ LE +C SEI+ ++K YQ NF + ++
Sbjct: 28 FTFIDFFAGIGGFRIPLE----KLGGKCLGYSEIDKEAIKVYQQNFISYYNSEELNLGDI 83
Query: 62 QD----IPDHDVLLAGFPCQPFSQAG 83
+ D+ + G PCQP+S AG
Sbjct: 84 SKINSLPKNVDLFVGGVPCQPWSVAG 109
>gi|325069077|ref|ZP_08127750.1| cytosine-specific DNA modification methyltransferase [Actinomyces
oris K20]
Length = 448
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
TDLF GIGG L +C ++ EI+ + + Y+ N+ +
Sbjct: 5 FTYTDLFAGIGGFHAALS----GMGGQCTYAVEIDKDAARIYEQNWGVGALGDITVDAGE 60
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ I HD+L AGFPCQPFS++G
Sbjct: 61 HGVSERIQPHDILAAGFPCQPFSKSG 86
>gi|119512301|ref|ZP_01631388.1| DNA modification methylase [Nodularia spumigena CCY9414]
gi|119463081|gb|EAW44031.1| DNA modification methylase [Nodularia spumigena CCY9414]
Length = 502
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGG + ++ SEIN ++KTY NF + K
Sbjct: 6 FTFIDLFAGIGGF----KMALSNNGGHSLGFSEINQDAIKTYCDNFQIEPSYNLGDITKI 61
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+++P HD+L AG PCQ +S AG
Sbjct: 62 KELPPHDLLTAGVPCQSWSIAG 83
>gi|18700048|gb|AAL03949.1| DNA methyltransferase Bse634IM [Geobacillus stearothermophilus]
Length = 387
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-------YSVKTYQANFPNTLIF 53
M+K+ LF G G + L + + +EI P Y+++ + + +
Sbjct: 1 MIKVASLFSGAGFLDLGF----AENGFDIVWGAEIVPEFSRAHNYNMRLRYNHDVDRIHT 56
Query: 54 GDIAKIKTQDIPDH-DVLLAGFPCQPFSQ 81
DI + D+P + ++ G PCQ FS
Sbjct: 57 VDIVNVSPMDMPQNIRGIIGGPPCQDFSI 85
>gi|79835466|gb|ABB52093.1| Mod [Arthrospira platensis]
gi|291569838|dbj|BAI92110.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39]
Length = 345
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLF G GG L + + E+ + TY N + + I
Sbjct: 27 VLDLFAGCGGFSLGFKAA----GFQTIGY-EMLADAAATYTRNLQDPCYCQTLE-IGQDL 80
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
DV++ G PCQPFS G
Sbjct: 81 CNHPDVIIGGPPCQPFSVGG 100
>gi|294155572|ref|YP_003559956.1| cytosine-specific DNA modification methyltransferase [Mycoplasma
crocodyli MP145]
gi|291599876|gb|ADE19372.1| cytosine-specific DNA modification methyltransferase [Mycoplasma
crocodyli MP145]
Length = 415
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQ---------TFNHRNVECFFSSEINPYSVKTYQANFPN--- 49
L + +LF G+GG R+ L + N ++++ P S K +
Sbjct: 3 LSVVELFAGVGGFRVGLNHINSFDENGRAIENNNWNFVWANQYEPSSNKQHAFECYITRF 62
Query: 50 ---TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
DI+K+ + IPDH++L+ GFPCQ +S A
Sbjct: 63 GDKNHSNDDISKVDKKVIPDHNLLVGGFPCQDYSVA 98
>gi|261326799|emb|CBH09772.1| cytosine-specific DNA methylase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 621
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 21/99 (21%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
++LF GIG R+ LE +C F+ E P++ Y AN
Sbjct: 226 FTFSELFAGIGMFRVGLE----RIGGKCVFAVECAPHARSVYHANHHLPRRSSCGNEALP 281
Query: 56 -----------IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + P HDVL AGFPCQ F++AG
Sbjct: 282 ATRRPVPLVGDITTVPSHYFPHHDVLTAGFPCQSFAKAG 320
>gi|294782269|ref|ZP_06747595.1| modification methylase Sau3AI [Fusobacterium sp. 1_1_41FAA]
gi|294480910|gb|EFG28685.1| modification methylase Sau3AI [Fusobacterium sp. 1_1_41FAA]
Length = 423
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 15/96 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQ---------TFNHRNVECFFSSEINPYSVKTYQANFPNTLI 52
L + +LF G+GG R+ L + E ++++ P + Y + T
Sbjct: 3 LTVIELFAGVGGFRVGLNNIIKIDSQNKAVENGKWEFIWANQFEPSTKAQYAFDCYVTRF 62
Query: 53 ------FGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
DI K+K IP H +L+ GFPCQ +S A
Sbjct: 63 GKENISNEDINKVKKNLIPKHSLLVGGFPCQDYSVA 98
>gi|256847840|ref|ZP_05553285.1| DNA-cytosine methyltransferase [Lactobacillus coleohominis
101-4-CHN]
gi|256715529|gb|EEU30505.1| DNA-cytosine methyltransferase [Lactobacillus coleohominis
101-4-CHN]
Length = 349
Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTL----IFGD 55
K+ +LFCG GG+ L + + ++++ + + +TY N D
Sbjct: 3 YKLGELFCGPGGLALGAKTADIGNGDQIVHAWANDFDKDTCETYIHNICPENPESVYCED 62
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ K + D L GFPC FS G
Sbjct: 63 VRKFDLTQLTPIDGLAFGFPCNDFSVVG 90
>gi|20068992|gb|AAM09644.1|AF458984_2 m6 adenine and m5 cytosine DNA methyltransferase [Acinetobacter
lwoffii]
Length = 952
Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSE------INPYSVKTYQANFPNTLIFGDI 56
DLF G GG+ + Q ++ F+++ I+ + +
Sbjct: 728 TFGDLFAGAGGMSQGMFQA----GLKPIFANDCFLSACISHKANHPETDVIYGDISEAHT 783
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q D+L G PCQ FSQAG
Sbjct: 784 KQKIYQYANKIDILCGGPPCQGFSQAG 810
>gi|218135211|ref|ZP_03464015.1| hypothetical protein BACPEC_03116 [Bacteroides pectinophilus ATCC
43243]
gi|217990596|gb|EEC56607.1| hypothetical protein BACPEC_03116 [Bacteroides pectinophilus ATCC
43243]
Length = 344
Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 13/92 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-------- 52
M +LF G GG+ L +E+ E + + T + N PN +
Sbjct: 1 MYTSIELFAGAGGLALGVEKA----GFNTLGLIEFDKDAADTLKKNRPNWNVINDDIANI 56
Query: 53 -FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ K + + D+L G PCQ FS AG
Sbjct: 57 SCLDLEKYFSIKKGELDLLSGGAPCQAFSYAG 88
>gi|313667095|gb|ADR72992.1| M2.BspMI [Bacillus sp. M(2010)]
Length = 353
Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------ 54
ML DLF G GG+ L L++ + S EIN + +T++ NFP +F
Sbjct: 1 MLTAVDLFSGAGGLLLALKEA----GYQTLLSCEINESACETHKYNFPEIPLFQGDIQNL 56
Query: 55 -DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I+ D D+++ G PCQ +S G
Sbjct: 57 TEDKIIEYTKGTDVDLVVGGPPCQGYSMFG 86
>gi|314940406|ref|ZP_07847565.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
TX0133a04]
gi|313640387|gb|EFS04967.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium
TX0133a04]
Length = 130
Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+ DLF GIGG L +EQ +C EI+ ++ ++Y+A +
Sbjct: 1 MTFLDLFAGIGGFCLGMEQA----GHQCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q + D+L GFPCQ FS AG
Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83
>gi|288919495|ref|ZP_06413826.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f]
gi|288349098|gb|EFC83344.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f]
Length = 642
Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLF G GG+ L LEQ + + +P + +T++ +F + D++ D
Sbjct: 33 VADLFSGAGGLSLGLEQA----GLRVVLGVDHDPEATETHRHHFAGLTLDQDLSDPGRVD 88
Query: 64 IP-------DHDVLLAGFPCQPFSQAG 83
DV++ G PCQPFS+AG
Sbjct: 89 EIAGLIRSLRLDVVVGGPPCQPFSRAG 115
>gi|80159730|ref|YP_398474.1| putative DNA methylase [Clostridium phage c-st]
gi|78675320|dbj|BAE47742.1| putative DNA methylase [Clostridium phage c-st]
Length = 370
Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
+K D F G G R +E EC EI + + F D+A++
Sbjct: 1 MKFIDFFSGAGMFRKGMEDA----GHECIGYVEIQKQARETYETNYDTTKEWTFHDVAQL 56
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
K +DIP+ D+ GFPC+ S A
Sbjct: 57 KAEDIPNADIWCFGFPCKNMSTA 79
>gi|319787787|ref|YP_004147262.1| DNA-cytosine methyltransferase [Pseudoxanthomonas suwonensis 11-1]
gi|317466299|gb|ADV28031.1| DNA-cytosine methyltransferase [Pseudoxanthomonas suwonensis 11-1]
Length = 425
Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 38/107 (35%), Gaps = 29/107 (27%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53
LK+ DLF G GG+ L LEQ F +E+N + TY N +
Sbjct: 6 LKVVDLFAGCGGLSLGLEQA----GFVPVFVNELNDDARATYIQNRVERHEWLAEPGFHA 61
Query: 54 -----------------GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + + D+L+ G PCQ FS G
Sbjct: 62 SDVKGMVLDKKYLPALEKRLKDTFAIEHGELDLLVGGPPCQGFSGIG 108
>gi|328946253|gb|EGG40397.1| modification methylase Sau96I [Streptococcus sanguinis SK1087]
Length = 333
Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
+K+ +LF G GG+ L +E+ E E + + +T ++N P+ +
Sbjct: 1 MKVIELFAGAGGLALGIERA----GFESIGLIEFDKAASETLKSNRPDWNVIHEDIEKIS 56
Query: 55 --DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ ++ + D+L G PCQ FS AG
Sbjct: 57 PLNLEELFNIRKGELDLLSGGAPCQSFSYAG 87
>gi|291528318|emb|CBK93904.1| DNA-methyltransferase (dcm) [Eubacterium rectale M104/1]
Length = 344
Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 13/92 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-------- 52
M +LF G GG+ L +E+ E + + T + N PN +
Sbjct: 1 MYTSIELFAGAGGLALGVEKA----GFNTLGLIEFDKDAADTLKKNRPNWNVINDDIANI 56
Query: 53 -FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ K + + D+L G PCQ FS AG
Sbjct: 57 SCLDLEKYFSIKKGELDLLSGGAPCQAFSYAG 88
>gi|258593909|emb|CAA33765.2| DNA(cytosine-5)methyltransferase [Lysinibacillus sphaericus]
Length = 396
Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 24/106 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN------------------------VECFFSSEINP 37
+ LFCG GG+ L E ++ ++++I
Sbjct: 30 FNVLSLFCGAGGLDLGFELAGLEQSLGTDKALEAFKDRDVYNAIRHESVFHTVYANDIFS 89
Query: 38 YSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+++TY+ N PN + + K ++ P ++++ GFPC FS+AG
Sbjct: 90 EALQTYEKNMPNHVFIHEKDIRKIKEFPSANLVIGGFPCPGFSEAG 135
>gi|254411906|ref|ZP_05025682.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
gi|196181628|gb|EDX76616.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
Length = 456
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---K 58
DLF GIGG R+ LE +C SEI+ +V Y+ NF + + ++
Sbjct: 28 FTFVDLFAGIGGFRIPLE----ELGGKCLGYSEIDKEAVNVYKKNFISYINADELYLGDI 83
Query: 59 IKTQDIPDH-DVLLAGFPCQPFSQAG 83
I +P D+L+ G PCQP+S AG
Sbjct: 84 IALHKLPFEVDILVGGVPCQPWSIAG 109
>gi|167746050|ref|ZP_02418177.1| hypothetical protein ANACAC_00745 [Anaerostipes caccae DSM 14662]
gi|167654565|gb|EDR98694.1| hypothetical protein ANACAC_00745 [Anaerostipes caccae DSM 14662]
Length = 615
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF G GG L + ++SEI P+ ++ P +GDI+K+
Sbjct: 6 LTLGSLFDGSGGFPLG----GLISGITPLWASEIEPFPIRVTTKRLPQVKHYGDISKMNG 61
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+ D++ G PCQ S AG
Sbjct: 62 ADLKPVDIITFGSPCQDMSIAG 83
>gi|291549830|emb|CBL26092.1| DNA-methyltransferase (dcm) [Ruminococcus torques L2-14]
Length = 410
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV---------KTYQANFPNTLI 52
+LF G GG+ L +E+ E E + + + +
Sbjct: 77 FTTIELFAGAGGLALGIEKA----GFETLGLVEFDKDAAESLKTNRPNWRVIHDDIANIS 132
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ + + D+L G PCQ FS AG
Sbjct: 133 CMDLEEYFGIKKGELDLLSGGAPCQAFSYAG 163
>gi|313677760|ref|YP_004055756.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
gi|312944458|gb|ADR23648.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
Length = 346
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFG 54
+ DLFCG GG+ + + + +++T+ N N+
Sbjct: 5 YNVIDLFCGCGGLSQGFIEA----DYNVILGIDHWKDAIETFNYNHKNSKGIVADLLNLD 60
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + D+++ G PCQ FS AG
Sbjct: 61 PQEIKTRYAIENVDLIVGGPPCQGFSIAG 89
>gi|159899163|ref|YP_001545410.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus ATCC
23779]
gi|159892202|gb|ABX05282.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus ATCC
23779]
Length = 362
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 5/88 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFN-HRNVECFFSSEINPYSV----KTYQANFPNTLIFGD 55
+ +F G GG+ L +Q + + S +I+ + + D
Sbjct: 145 LFSALSIFSGAGGLNLGAQQAKLPNAKWQTIASIDIDRDACTSLEHHFANKNVICQNIID 204
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + K+ D+ G PCQ FSQAG
Sbjct: 205 ITQPKSLMSQPLDLSYGGPPCQSFSQAG 232
>gi|188581100|ref|YP_001924545.1| DNA-cytosine methyltransferase [Methylobacterium populi BJ001]
gi|179344598|gb|ACB80010.1| DNA-cytosine methyltransferase [Methylobacterium populi BJ001]
Length = 446
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 14/89 (15%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIKTQD 63
DLF G GG+ L EQ + ++EI+P ++ ++ + + +
Sbjct: 7 IDLFSGAGGLSLGFEQA----GFDVRAAAEIDPVHAAVHKFNFPNCAVLARSVVGLTAAE 62
Query: 64 IP---------DHDVLLAGFPCQPFSQAG 83
I DV+ G PCQ FS G
Sbjct: 63 IREAAALGPSDRVDVVFGGPPCQGFSMIG 91
>gi|329769196|ref|ZP_08260616.1| hypothetical protein HMPREF0433_00380 [Gemella sanguinis M325]
gi|328839415|gb|EGF88993.1| hypothetical protein HMPREF0433_00380 [Gemella sanguinis M325]
Length = 415
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 16/97 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQ----------TFNHRNVECFFSSEINPYSVKTYQANFPNT- 50
L + +LF G+GG R+ L ++++ P + + +
Sbjct: 3 LDVVELFAGVGGFRVGLNNITEFNKKTGKALEKNGWNFVWANQYEPSTKAQHAFECYSER 62
Query: 51 -----LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
DI K+ + IPDH +L+ GFPCQ +S A
Sbjct: 63 FQDGECSNEDINKVDKKSIPDHSLLVGGFPCQDYSVA 99
>gi|153874403|ref|ZP_02002639.1| Modification methylase [Beggiatoa sp. PS]
gi|152069134|gb|EDN67362.1| Modification methylase [Beggiatoa sp. PS]
Length = 92
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIA 57
M+K+ DLF GIGG+ L + + + + +++ YQANF + + ++
Sbjct: 1 MMKVIDLFAGIGGLSLGFQNA----GFKIVAAIDNWQAAMENYQANFNHDALLIDLSQMS 56
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
K D+++ G PCQ F G
Sbjct: 57 DYKKFKDYQPDIIIGGPPCQDFPVPG 82
>gi|325069024|ref|ZP_08127697.1| modification methylase XorII [Actinomyces oris K20]
Length = 201
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ DLF G GG+ + E++P + +Y+A FP T ++ +
Sbjct: 6 IRVLDLFAGAGGLTAGFHTA--SSRFRSIAAVEMDPEAAASYRATFPKTEVYAGAIQDWL 63
Query: 62 QDIPDH---DVLLAGFPCQPFSQAG 83
+ DV++ G PCQ FS G
Sbjct: 64 AEGKIPTGVDVVVGGPPCQGFSTLG 88
>gi|254467362|ref|ZP_05080773.1| DNA-cytosine methyltransferase [Rhodobacterales bacterium Y4I]
gi|206688270|gb|EDZ48752.1| DNA-cytosine methyltransferase [Rhodobacterales bacterium Y4I]
Length = 319
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKI 59
ML +L G GG L LE + EI+ + T ++ D+ K
Sbjct: 1 MLTSVELCAGAGGQALGLEAA----GFDHTALVEIDKHCCATLRHNRPAWNVLEEDVRKF 56
Query: 60 KTQ--DIPDHDVLLAGFPCQPFSQAG 83
K D D+L G PC PFS AG
Sbjct: 57 KEVAGDYKGIDLLAGGLPCPPFSVAG 82
>gi|255279956|ref|ZP_05344511.1| modification methylase AgeI [Bryantella formatexigens DSM 14469]
gi|255269729|gb|EET62934.1| modification methylase AgeI [Bryantella formatexigens DSM 14469]
Length = 475
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 13/89 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLFCG GG+ L +++I V TY N P I
Sbjct: 103 RLVDLFCGAGGLSLGF----VQEGFAVSLANDIEECCVDTYAHNHPEVPESHIIRGDIHD 158
Query: 63 DIP---------DHDVLLAGFPCQPFSQA 82
D+++ G PCQ FS A
Sbjct: 159 VAGELDDLLADRRVDIVIGGPPCQGFSMA 187
>gi|258406639|ref|YP_003199380.1| transcriptional regulator, XRE family [Desulfohalobium retbaense
DSM 5692]
gi|257798866|gb|ACV69802.1| transcriptional regulator, XRE family [Desulfohalobium retbaense
DSM 5692]
Length = 468
Score = 71.1 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60
L LF G GG L E++P K Y+ NFPN+ G DI +I+
Sbjct: 117 LNAISLFSGCGGFSLGFSAA----GFNVRGFLELDPGLRKIYRLNFPNSFEMGGDITQIQ 172
Query: 61 TQDIPDH-------DVLLAGFPCQPFSQAG 83
I ++ DV++ G PCQ FS +G
Sbjct: 173 DAKIKNYKSLIGDIDVIIGGPPCQGFSLSG 202
>gi|261839852|gb|ACX99617.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
Length = 319
Score = 71.1 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLEQ----CHLKCVGHAEINHGALRTYELFFKDTHNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+PD D L++GFPCQ FS G
Sbjct: 59 PNDLPDFDALISGFPCQAFSING 81
>gi|298346372|ref|YP_003719059.1| DNA-cytosine methyltransferase [Mobiluncus curtisii ATCC 43063]
gi|298236433|gb|ADI67565.1| DNA-cytosine methyltransferase [Mobiluncus curtisii ATCC 43063]
Length = 508
Score = 71.1 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ LF G GG L +E ++SEI P+ + P GDI I
Sbjct: 5 LRLGSLFDGSGGFPL----AATKVGIEPAWASEIEPFPILVTTTRLPQMQHLGDICNIDG 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ DV+ G PCQ S AG
Sbjct: 61 SQLEPVDVVTFGSPCQDLSVAG 82
>gi|315656923|ref|ZP_07909810.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492878|gb|EFU82482.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 503
Score = 71.1 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF G GG L + ++ ++SE++P++++ + N P GDI +
Sbjct: 4 LTLGSLFDGSGGFPLAAKM----VGIKPMWASEVDPFAIRVTKKNLPEVRHVGDINLLDG 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ DV+ G PCQ S AG
Sbjct: 60 GRLQPVDVITFGSPCQDLSIAG 81
>gi|322382626|ref|ZP_08056496.1| DNA-methyltransferase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321153407|gb|EFX45824.1| DNA-methyltransferase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 345
Score = 71.1 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
++ LF GIGGI L + +E E + + + ++P+ I+ D+ +
Sbjct: 1 MRKLSLFSGIGGIDLAAKWA----GIETVAFCEKESFPQQVLRKHWPDIPIYDDVCALTR 56
Query: 60 -------KTQDIPDHDVLLAGFPCQPFSQAG 83
D++ AG+PCQPFS AG
Sbjct: 57 EVLEQDGIITRNRTIDLISAGYPCQPFSNAG 87
>gi|154502385|ref|ZP_02039445.1| hypothetical protein RUMGNA_00198 [Ruminococcus gnavus ATCC 29149]
gi|153797010|gb|EDN79430.1| hypothetical protein RUMGNA_00198 [Ruminococcus gnavus ATCC 29149]
Length = 215
Score = 71.1 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 36/110 (32%), Gaps = 32/110 (29%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------------- 47
+K D F G+GG R +E EC E + ++ +Y +
Sbjct: 1 MKFIDFFAGVGGFRRGMELA----GHECVGFCEFDKFATASYTSMHLLTQEQREFLDKMP 56
Query: 48 --------------PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI ++ DIP D GFPCQ S AG
Sbjct: 57 LKQRQKEILKEEYRNGEWYANDIRRVYAGDIPKADCWCFGFPCQDISVAG 106
>gi|320321292|gb|EFW77421.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
Length = 410
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIK 60
L DLF G GG+ L + +++EI+P Y+ + + DI ++
Sbjct: 11 LTSLDLFAGAGGLSEGLREA----GFTSLYANEISPRYAQTYGANHPSTHVDNQDIREVD 66
Query: 61 TQD--------IPDHDVLLAGFPCQPFSQ 81
+ + D++ G PCQ FS
Sbjct: 67 ARKVRKSLGLKRGELDLIAGGPPCQGFSI 95
>gi|255530844|ref|YP_003091216.1| DNA-cytosine methyltransferase [Pedobacter heparinus DSM 2366]
gi|255343828|gb|ACU03154.1| DNA-cytosine methyltransferase [Pedobacter heparinus DSM 2366]
Length = 350
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
++ +LF GIGG R + + EC SEI+ ++ TY AN+ I
Sbjct: 1 MRYIELFSGIGGFRNAADHLTVDTDQPFECIAFSEIDRHAKSTYLANYNTEGEVQMDDII 60
Query: 60 KTQDI-------PDHDVLLAGFPCQPFSQAG 83
D PD D+LL GFPCQ FS G
Sbjct: 61 SFTDEKKNIENLPDFDLLLGGFPCQAFSLLG 91
>gi|170077805|ref|YP_001734443.1| Type II cytosine-5 DNA methyltransferase [Synechococcus sp. PCC
7002]
gi|462645|sp|P34882|MTAA_SYNP2 RecName: Full=Modification methylase AquI subunit alpha;
Short=M.AquI subunit alpha; Short=M.AquiA; AltName:
Full=Cytosine-specific methyltransferase AquI subunit
alpha
gi|2126509|pir||I39659 modification methylase AquI, alpha protein - Synechococcus sp.
(PCC 7002)
gi|142180|gb|AAA22067.1| M.AquI alpha protein [Synechococcus sp. PCC 7002]
gi|169885474|gb|ACA99187.1| DNA-cytosine methyltransferase [Synechococcus sp. PCC 7002]
Length = 248
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 13/90 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIKT 61
K+ LF G GG+ + + E +P T + N P+T + DI I T
Sbjct: 4 KLISLFSGAGGMDIGFHAA----GFSTAVAVEQDPSCCNTLRLNMPDTPVIEGDITSITT 59
Query: 62 Q--------DIPDHDVLLAGFPCQPFSQAG 83
Q + + D+++ G PCQ FS AG
Sbjct: 60 QVILEAAKVNPLEIDLVIGGPPCQSFSLAG 89
>gi|261252209|ref|ZP_05944782.1| DNA-cytosine methyltransferase [Vibrio orientalis CIP 102891]
gi|260935600|gb|EEX91589.1| DNA-cytosine methyltransferase [Vibrio orientalis CIP 102891]
Length = 584
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 48/116 (41%), Gaps = 38/116 (32%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------- 48
DLF GIGG+R E +C F+SE + + +TY AN
Sbjct: 95 FTFIDLFAGIGGLRRGFE----DIGGKCRFTSEWDDKARRTYLANHYVDKDELPYFLDES 150
Query: 49 -----NTLIFGDIAKI----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
F DI KI + IP+HDVLLAGFPCQPFS AG
Sbjct: 151 TENPMKNRDFMDITKITLSGESSVSEKEKLNHIRKHIPEHDVLLAGFPCQPFSLAG 206
>gi|307699864|ref|ZP_07636915.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris FB024-16]
gi|307614902|gb|EFN94120.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris FB024-16]
Length = 439
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 24/105 (22%)
Query: 2 LKITDLFCGIGGIRLDLE-QTFNHR---------NVECFFSSEINPY--------SVKTY 43
+++ +LF G+GG RL LE + N ++++ P +
Sbjct: 9 IRVAELFAGVGGFRLGLEGWAGDATAPGTLPSAGNFTTIWANQWEPPGTLPRQFAARCYQ 68
Query: 44 QANFPNTLIFGDIAKIKTQ------DIPDHDVLLAGFPCQPFSQA 82
N++I DIA++ +IPD D+++ GFPCQ +S A
Sbjct: 69 SHFGENSVINRDIARVMDDAEAGQIEIPDVDLVVGGFPCQDYSVA 113
>gi|304389869|ref|ZP_07371828.1| possible DNA-cytosine methyltransferase [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
gi|304327045|gb|EFL94284.1| possible DNA-cytosine methyltransferase [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
Length = 503
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF G GG L + ++ ++SE++P++ + + N P GDI +
Sbjct: 4 LTLGSLFDGSGGFPLAAKM----VGIKPMWASEVDPFAFRVTKKNLPEVRHVGDINLLDG 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ DV+ G PCQ S AG
Sbjct: 60 GRLQPVDVITFGSPCQDLSIAG 81
>gi|68249825|ref|YP_248937.1| modification methylase BepI-like [Haemophilus influenzae 86-028NP]
gi|68058024|gb|AAX88277.1| modification methylase BepI-like [Haemophilus influenzae 86-028NP]
gi|309973261|gb|ADO96462.1| DNA (cytosine-5-)-methyltransferase [Haemophilus influenzae R2846]
Length = 407
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 38/122 (31%), Gaps = 40/122 (32%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--------------------------VECFFSSEI 35
+K+ LF G GG+ + E +F+ E F+++I
Sbjct: 1 MKLISLFSGCGGMDIGFEGSFSCLKKSINEELHPEWISSTENEWVTVSPTSFETIFANDI 60
Query: 36 NPYS-VKTYQANFPNTLIFGDIAKI-------------KTQDIPDHDVLLAGFPCQPFSQ 81
P + +I + D D+L GFPCQ FS
Sbjct: 61 KPDAKAAWVSYFLDQKANANEIYHLESIVDLVKKERETHNIFPKDIDILTGGFPCQDFSV 120
Query: 82 AG 83
AG
Sbjct: 121 AG 122
>gi|283782595|ref|YP_003373349.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
gi|283441341|gb|ADB13807.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
Length = 424
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 24/105 (22%)
Query: 2 LKITDLFCGIGGIRLDLE----------QTFNHRNVECFFSSEINPYSVKTYQANFPNT- 50
+K+ +LF G+GG RL LE + ++++ P ++ Q +
Sbjct: 5 IKVAELFAGVGGFRLGLEGYTPSEENNFTAEPAGPFKTVWANQWEPAGQESKQFAWRCYE 64
Query: 51 -------LIFGDIAKI------KTQDIPDHDVLLAGFPCQPFSQA 82
+ DIA++ DIP+ D+L+ GFPCQ +S A
Sbjct: 65 KRFGKGSCVNEDIAEVLKKFEHGECDIPNFDMLVGGFPCQDYSVA 109
>gi|254779672|ref|YP_003057778.1| M.HpyAVIII, a type II cytosine specific DNA methyltransferase
[Helicobacter pylori B38]
gi|254001584|emb|CAX29633.1| M.HpyAVIII, a type II cytosine specific DNA methyltransferase
[Helicobacter pylori B38]
Length = 318
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L D GIGG RL LE +++C +EIN +++TY+ F +T FGD+ +I
Sbjct: 3 ILTFMDFCSGIGGGRLGLE----RCHLKCVGHAEINHEALRTYELFFKDTHNFGDLMRIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
++PD D L++GFPCQ FS G
Sbjct: 59 PNNLPDFDALVSGFPCQAFSING 81
>gi|325695618|gb|EGD37518.1| modification methylase SinI [Streptococcus sanguinis SK150]
Length = 471
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K F G G+ + +E ++ + EIN + T N + GDI +
Sbjct: 74 IKALSFFSGGMGLDIGMENA----GIKPLLACEINKEARATIVENNTEIGLIGDIWQCSK 129
Query: 62 QDIPDH---------DVLLAGFPCQPFSQAG 83
++I + DV+ G PCQ FS AG
Sbjct: 130 EEIYKYANLDKNTSIDVVFGGPPCQAFSTAG 160
>gi|297159196|gb|ADI08908.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1]
Length = 664
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---------D 55
DLF G GG+ L L++ + + + +++T+ ANFP +
Sbjct: 45 VDLFSGAGGLSLGLQRA----GWTTAAAVDFDERALETHAANFPGMSLRMDLGNPAERDR 100
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++ D++ G PCQPFS+AG
Sbjct: 101 LEQVLEPAKGKIDLVAGGPPCQPFSRAG 128
>gi|172037464|ref|YP_001803965.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142]
gi|171698918|gb|ACB51899.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142]
Length = 430
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 42/121 (34%), Gaps = 38/121 (31%)
Query: 1 MLKITDLFCGIGGIRLDLE--------------------------QTFNHRNVECFFSSE 34
M ++ LF G GG+ L E N N + F+++
Sbjct: 1 MKRLLSLFSGCGGMDLGFEGNFWIHEDCINETIHPNWIVKKKERWVLLNKTNFDIVFAND 60
Query: 35 INPYSVKTYQANF------PNTLIFGDIAKIKTQDIPDHD------VLLAGFPCQPFSQA 82
I Y+ + + F + + IK + + D ++ GFPCQ FS +
Sbjct: 61 IEKYAYNAWMSYFGKKILGKIFHLNSLVDLIKLSETGNFDFPNNIDIITGGFPCQDFSVS 120
Query: 83 G 83
G
Sbjct: 121 G 121
>gi|152994008|ref|YP_001359729.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1]
gi|151425869|dbj|BAF73372.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1]
Length = 362
Score = 70.7 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
D+F G GG+ + + + E + ++ TY+AN P+T + DI ++
Sbjct: 5 FTAVDIFSGAGGMSIGAVMA----GITPVLAVEFDEHAAATYKANHPHTNVLAKDIKGVE 60
Query: 61 TQDI--PDHDVLLAGFPCQPFSQA 82
+L G PCQ FS A
Sbjct: 61 PLKHVEKHPFLLFGGPPCQGFSVA 84
>gi|19718332|ref|NP_604405.1| plasmid encoded methyltransferase Pem [Salmonella enteritidis]
gi|19526586|gb|AAL87019.1| plasmid encoded methyltransferase Pem [Salmonella enterica subsp.
enterica serovar Enteritidis]
Length = 382
Score = 70.7 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
++ ++F G GG+ LE + E+N ++ + + + GDI
Sbjct: 1 MRSLEIFSGAGGLAKGLELA----GFQHVGFVELNKHACDSLRLNFDEEKVFQGDIKNYD 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
I D++ G PCQPFS G
Sbjct: 57 LSSIDKIDIVAGGPPCQPFSLGG 79
>gi|310828705|ref|YP_003961062.1| hypothetical protein ELI_3130 [Eubacterium limosum KIST612]
gi|308740439|gb|ADO38099.1| Phage-related protein [Eubacterium limosum KIST612]
Length = 262
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L LF GIGGI L E E E + K + ++P+ + D+ +
Sbjct: 6 LTHLSLFTGIGGIDLAAEWA----GFETVGQCEFADFPTKVLKKHWPDVPRWRDVKDVTR 61
Query: 60 ----KTQDIPDHDVLLAGFPCQPFSQAG 83
+ + D++ GFPCQP S G
Sbjct: 62 ESFEQWTGLQTVDLISGGFPCQPHSVIG 89
>gi|154486241|ref|ZP_02027648.1| hypothetical protein BIFADO_00044 [Bifidobacterium adolescentis
L2-32]
gi|154084104|gb|EDN83149.1| hypothetical protein BIFADO_00044 [Bifidobacterium adolescentis
L2-32]
Length = 213
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K LF GI + E +EI P+ + ++PN GD+ K+
Sbjct: 1 MKYISLFSGI----EAATVAWQTLGWEPVAYAEIEPFPKAVLKHHYPNVPDLGDMTKVNW 56
Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83
++ DV++ G PCQ FS AG
Sbjct: 57 KEYHHAADVVVGGSPCQAFSIAG 79
>gi|260591850|ref|ZP_05857308.1| type II DNA modification methyltransferase [Prevotella veroralis
F0319]
gi|260536134|gb|EEX18751.1| type II DNA modification methyltransferase [Prevotella veroralis
F0319]
Length = 166
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+ + LF G GG+ ++E +P T++ANFP+T I GDI +K
Sbjct: 1 MNLISLFSGAGGLDKGFHNA----GFRTMVANEFDPKICPTFKANFPDTKLIEGDIRNVK 56
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+ P H ++ G PCQ +S+AG
Sbjct: 57 DGEFPKHVAGIIGGPPCQSWSEAG 80
>gi|261368869|ref|ZP_05981752.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum variabile
DSM 15176]
gi|282568964|gb|EFB74499.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum variabile
DSM 15176]
Length = 565
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K+ DLF G GG+ L + + + E +PY +TY+ N + GD+
Sbjct: 5 YKVVDLFSGAGGLSLGF---LQTKKYDIKVAFENSPYMQETYKKNHTGVEVQGDVCAADY 61
Query: 62 QD----IPDHDVLLAGFPCQPFSQA 82
D DV++ G PCQ FS A
Sbjct: 62 ADIVRRYGKIDVVIGGPPCQGFSNA 86
>gi|314940603|ref|ZP_07847734.1| conserved hypothetical protein [Enterococcus faecium TX0133a04]
gi|313640209|gb|EFS04790.1| conserved hypothetical protein [Enterococcus faecium TX0133a04]
Length = 83
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
++ DLF GIGG RL +EQ +H C EI+ ++ ++Y+A +
Sbjct: 1 MRFLDLFAGIGGFRLGMEQASHH----CIGFCEIDKFARRSYKAIHDTSKEVEMHDITSV 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q + D+L GFPCQ FS AG
Sbjct: 57 SDEFIQSLGPVDILCGGFPCQAFSIAG 83
>gi|72386611|ref|XP_843730.1| cytosine-specific DNA methylase [Trypanosoma brucei TREU927]
gi|62175408|gb|AAX69550.1| cytosine-specific DNA methylase, putative [Trypanosoma brucei]
gi|70800262|gb|AAZ10171.1| cytosine-specific DNA methylase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 621
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 21/99 (21%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
++LF G+G R+ LE +C F+ E P++ Y AN
Sbjct: 226 FTFSELFAGMGMFRVGLE----RIGGKCVFAVECAPHARSVYHANHHLPRRNSCGNEALP 281
Query: 56 -----------IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + P HDVL AGFPCQ F++AG
Sbjct: 282 ATRRPVPLVGDITTVPSHYFPHHDVLTAGFPCQSFAKAG 320
>gi|901818|gb|AAA69959.1| 5C-DNA methyltransferase [Bacillus phage H2]
Length = 503
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
L++ LF GIG L E SEI+ Y++K+Y N FGD++KI
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVE--YELVGFSEIDKYAIKSYCAIHNVDEQSNFGDVSKI 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +P+ D+L+ G PCQ FS G
Sbjct: 62 DKKKLPEFDLLVGGSPCQSFSVRG 85
>gi|163738696|ref|ZP_02146110.1| DNA-cytosine methyltransferase [Phaeobacter gallaeciensis BS107]
gi|163741592|ref|ZP_02148983.1| DNA modification methylase M.NGOI [Phaeobacter gallaeciensis
2.10]
gi|161385326|gb|EDQ09704.1| DNA modification methylase M.NGOI [Phaeobacter gallaeciensis
2.10]
gi|161388024|gb|EDQ12379.1| DNA-cytosine methyltransferase [Phaeobacter gallaeciensis BS107]
Length = 324
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML +L G GG L LE+ + EI+ + T + N P + + +
Sbjct: 1 MLTSVELCAGAGGQALGLEKA----GFDHTALVEIDKHCCATLRHNRPQWNVLEEDVRAF 56
Query: 61 TQD---IPDHDVLLAGFPCQPFSQAG 83
++ D+L G PC PFS AG
Sbjct: 57 KEEADAYHGIDLLAGGLPCPPFSVAG 82
>gi|197124335|ref|YP_002136286.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K]
gi|196174184|gb|ACG75157.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K]
Length = 508
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 33/94 (35%), Gaps = 17/94 (18%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-------- 54
DLFCG GG L + +I+ + +TY+ NF
Sbjct: 7 TFIDLFCGAGGFSLGFRAAGALS----LAAVDIDEVAARTYRRNFGKLQPGMAPHVLSGD 62
Query: 55 -----DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+I D+L+ G PCQ FS+ G
Sbjct: 63 LGNLEEIDLGSIVHERTLDILIGGPPCQGFSRIG 96
>gi|10955252|ref|NP_052188.1| DNA-methyltransferase [Escherichia coli]
gi|1237268|gb|AAC37145.1| eco29kIM [Escherichia coli]
gi|2660513|emb|CAA04944.1| DNA-methyltransferase [Escherichia coli]
Length = 382
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
++ ++F G GG+ LE + E+N ++ + + + GDI
Sbjct: 1 MRSLEIFSGAGGLAKGLELA----GFQHVGFVELNKHACDSLRLNFDEEKVFQGDIKNYD 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ D++ G PCQPFS G
Sbjct: 57 LSSLDKIDIVAGGPPCQPFSLGG 79
>gi|254475144|ref|ZP_05088530.1| DNA-cytosine methyltransferase [Ruegeria sp. R11]
gi|214029387|gb|EEB70222.1| DNA-cytosine methyltransferase [Ruegeria sp. R11]
Length = 324
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKI 59
ML +L G GG L LE+ E EI+ + T ++ D+ K
Sbjct: 1 MLTSVELCAGAGGQALGLEKA----GFEHTALVEIDKHCCATLRHNRPKWNVLEEDVRKF 56
Query: 60 K--TQDIPDHDVLLAGFPCQPFSQAG 83
K D+L G PC PFS AG
Sbjct: 57 KDVADSYHGIDLLAGGLPCPPFSVAG 82
>gi|156936516|ref|YP_001440431.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
gi|156534770|gb|ABU79595.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
Length = 415
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 13/89 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---------NTLI 52
L DLF G GG+ L + +++EI+P +TY N P +
Sbjct: 16 LTSLDLFAGAGGLSEGLREA----GFTSLYANEISPRYAQTYAVNHPGTIVESRDIREVD 71
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
I + + D++ G PCQ FS
Sbjct: 72 AHKIRNLLGLKRGELDLIAGGPPCQGFSI 100
>gi|313678719|ref|YP_004056459.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis PG45]
gi|312950602|gb|ADR25197.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis PG45]
Length = 324
Score = 70.7 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----- 58
I DLF G GG+ L Q N + + E +V TY NF ++ DI
Sbjct: 6 IIDLFAGAGGLTLGFTQ----NNFDILDTIEFWQPAVDTYNFNFKKNVVAKDITDSEVRN 61
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
+++ D+++ GFPCQ FS AG
Sbjct: 62 ELESNWKNKTDLVIGGFPCQGFSLAG 87
>gi|301167156|emb|CBW26735.1| modification methylase (cytosine-specific DNA methylase)
[Bacteriovorax marinus SJ]
Length = 383
Score = 70.7 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------ 54
+L D+F G GG+ LE ++C + N ++++T+ N + +
Sbjct: 5 VLNFIDIFAGAGGLSCGLELA----GMKCVLGIDANKHAMETFARNHKHAQTYCGDITKL 60
Query: 55 -DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+K D V++ G PCQ FS G
Sbjct: 61 TKKELLKKLDGNHVHVVVGGPPCQGFSTVG 90
>gi|330997449|ref|ZP_08321300.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila
YIT 11841]
gi|329570823|gb|EGG52539.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila
YIT 11841]
Length = 357
Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--------TLIF 53
+ DLFCG GG+ E+ + ++ T+ N +
Sbjct: 6 YNVVDLFCGCGGLSKGFEEA----GYNILVGVDFEQSALNTFSYNHNGAVGLRLDLSEPE 61
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
A + D D+++ G PCQ FS G
Sbjct: 62 SFDAIVDAVDGRLVDIIIGGPPCQGFSLTG 91
>gi|326772743|ref|ZP_08232027.1| modification methylase XorII [Actinomyces viscosus C505]
gi|326637375|gb|EGE38277.1| modification methylase XorII [Actinomyces viscosus C505]
Length = 364
Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ DLF G GG+ + E++P + +Y+A FP T ++ +
Sbjct: 6 IRVLDLFAGAGGLTAGFHTA--SSRFRSIAAVEMDPEAAASYRATFPKTEVYAGAIQDWL 63
Query: 62 QDIPDH---DVLLAGFPCQPFSQAG 83
+ DV++ G PCQ FS G
Sbjct: 64 AEGTIPTGVDVVVGGPPCQGFSTLG 88
>gi|307825806|ref|ZP_07656022.1| DNA-cytosine methyltransferase [Methylobacter tundripaludum SV96]
gi|307733114|gb|EFO03975.1| DNA-cytosine methyltransferase [Methylobacter tundripaludum SV96]
Length = 359
Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 31/91 (34%), Gaps = 16/91 (17%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY------------QANFPNT 50
DLF G GG L + + + EIN ++ TY
Sbjct: 7 NCIDLFAGAGGFSL----AAKNVGFKVSAAIEINNHACTTYRQNLIEGNSTKLYQKNILE 62
Query: 51 LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
L +I D D++L G PCQ FS
Sbjct: 63 LAPEEIKHAHFMDGAVCDIVLGGPPCQGFSV 93
>gi|325270514|ref|ZP_08137114.1| modification methylase HindV [Prevotella multiformis DSM 16608]
gi|324987090|gb|EGC19073.1| modification methylase HindV [Prevotella multiformis DSM 16608]
Length = 320
Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+K DLFCG GG+ L +Q + + + Y+ NF + + D+
Sbjct: 1 MKAVDLFCGCGGLSLGFQQA----GYNVVAAYDNWDAATDVYRLNFSHPVHKADLMDAGK 56
Query: 60 --KTQDIPDHDVLLAGFPCQPFSQAG 83
++ ++++ G PCQ +S AG
Sbjct: 57 ASESIARYAPEIIIGGPPCQDYSSAG 82
>gi|304311589|ref|YP_003811187.1| C-5 cytosine-specific DNA methylase [gamma proteobacterium HdN1]
gi|301797322|emb|CBL45542.1| C-5 cytosine-specific DNA methylase [gamma proteobacterium HdN1]
Length = 387
Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
+K ++F G GG+ LE + + E N ++ + + + FGDI
Sbjct: 1 MKSLEIFSGAGGLAKGLELS----GFKHAAFVEYNKHACASLSENFDRKKVFFGDIQDFD 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ + DV+ G PCQPFS G
Sbjct: 57 LTVLDNIDVVAGGPPCQPFSLGG 79
>gi|50949214|emb|CAF31654.1| putative C5-methyltransferase [Cloning vector pGID052]
Length = 307
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 38/105 (36%), Gaps = 24/105 (22%)
Query: 3 KITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINPY 38
+ LF G GG+ L LE +S++
Sbjct: 50 NVVSLFSGAGGLDLGLEMAGIDAVMGSKFTDNILNDKTEYNKNRKKSIFNIVYSNDNFKE 109
Query: 39 SVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +TY F ++ D K P++D+++ GFPC FS AG
Sbjct: 110 ANQTYTDMFSENIVKHDKDIRKVAIFPNNDIMIGGFPCPGFSSAG 154
>gi|27733906|ref|NP_775697.1| putative C5-methyltransferase [Leuconostoc citreum]
gi|27552370|emb|CAD38156.1| putative C5-methyltransferase [Leuconostoc citreum]
Length = 403
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 38/105 (36%), Gaps = 24/105 (22%)
Query: 3 KITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINPY 38
+ LF G GG+ L LE +S++
Sbjct: 50 NVVSLFSGAGGLDLGLEMAGIDAVMGSKFTDNILNDKTEYNKNRKKSIFNIVYSNDNFKE 109
Query: 39 SVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +TY F ++ D K P++D+++ GFPC FS AG
Sbjct: 110 ANQTYTDMFSENIVKHDKDIRKVAIFPNNDIMIGGFPCPGFSSAG 154
>gi|67924199|ref|ZP_00517640.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67853953|gb|EAM49271.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 358
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI--AKI 59
+K +LF G GG+ L LE V E++ V T Q N N IF +
Sbjct: 72 IKTIELFAGCGGMALGLENA----GVRHELLVEVSKDCVNTLQKNRQNWTIFQEDVSNID 127
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
Q D++ GFPCQ FS AG
Sbjct: 128 FQQYYGKIDIVSGGFPCQAFSYAG 151
>gi|163761361|ref|ZP_02168435.1| C-5 cytosine-specific DNA methylase family protein [Hoeflea
phototrophica DFL-43]
gi|162281356|gb|EDQ31653.1| C-5 cytosine-specific DNA methylase family protein [Hoeflea
phototrophica DFL-43]
Length = 376
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 18/94 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
LK+ DLF G GG L + E F+ E + + T++ N ++
Sbjct: 3 LKVVDLFAGAGGFSLAAVRA----GCEIVFAVEFDKNAATTFRNNIGADHRSKNVVVYNR 58
Query: 61 -------------TQDIPDHDVLLAGFPCQPFSQ 81
D D+LL G PCQ FS
Sbjct: 59 DITSLSASALAKKHFPASDCDLLLGGPPCQGFST 92
>gi|51892448|ref|YP_075139.1| site-specific DNA-methyltransferase [Symbiobacterium thermophilum
IAM 14863]
gi|51856137|dbj|BAD40295.1| site-specific DNA-methyltransferase [Symbiobacterium thermophilum
IAM 14863]
Length = 486
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 21/98 (21%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLF G GG+ L ++ E + E++P++ +++ NF F AK +
Sbjct: 14 RVLDLFAGCGGLSLGFQRA----GFEILAAVEMDPHAARSHAINFHPGDRFDLHAKPRDI 69
Query: 63 DIPDH-----------------DVLLAGFPCQPFSQAG 83
D+++ G PCQ +++ G
Sbjct: 70 SQEQPDQVLGELYPGERAEDLVDIIIGGPPCQAYARVG 107
>gi|331091845|ref|ZP_08340677.1| hypothetical protein HMPREF9477_01320 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402744|gb|EGG82311.1| hypothetical protein HMPREF9477_01320 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 410
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+LF G GG+ L +E+ E E + + +I+
Sbjct: 77 FTTIELFAGAGGLALGIEKA----GFEPVGLIEFDKDAAESLKTNRPNWRVIHDDIANIS 132
Query: 58 KIKTQDI-----PDHDVLLAGFPCQPFSQAG 83
+ +D + D+L G PCQ FS AG
Sbjct: 133 CLDLEDYFGIKKGELDLLSGGAPCQAFSYAG 163
>gi|225026529|ref|ZP_03715721.1| hypothetical protein EUBHAL_00778 [Eubacterium hallii DSM 3353]
gi|224956143|gb|EEG37352.1| hypothetical protein EUBHAL_00778 [Eubacterium hallii DSM 3353]
Length = 461
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 19/99 (19%)
Query: 3 KITDLFCGIGGIRLDL------EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--- 53
+ +LF G+GG R L E + + ++ P T A+ F
Sbjct: 4 TVCELFAGVGGFRCGLNNIKTAEDYGKEEKWDTVWFNQWEPSEKTTQYAHDCYVYRFGPR 63
Query: 54 ----------GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+I + IPD ++L+ GFPCQ +S A
Sbjct: 64 LDINGEDTTNYNIEDVDKAKIPDFNLLVGGFPCQDYSVA 102
>gi|224418258|ref|ZP_03656264.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter
canadensis MIT 98-5491]
gi|253827583|ref|ZP_04870468.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313141791|ref|ZP_07803984.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
gi|253510989|gb|EES89648.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313130822|gb|EFR48439.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
Length = 589
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M +I DLFCG GG LEQ ++N + + ++ T+ NF + K
Sbjct: 1 MYRILDLFCGAGGFSYGLEQ---NKNFKTVIGLDFEKAAIDTFNHNFKQAIGICGDITNK 57
Query: 61 TQDIPDHDV--------LLAGFPCQPFSQAG 83
++ ++ G PCQ FS G
Sbjct: 58 EVKDKVVNLAKELKVNMVIGGPPCQGFSLKG 88
>gi|291007577|ref|ZP_06565550.1| DNA-cytosine methyltransferase [Saccharopolyspora erythraea NRRL
2338]
Length = 418
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 29/97 (29%), Gaps = 15/97 (15%)
Query: 2 LKITDLFCGIGGIRLDLE----QTFNHRNVECFFSSEINPYSVKTY-----------QAN 46
+ + DLF G GG + E + + TY
Sbjct: 8 INMIDLFAGCGGFTQGFREFRPPGGTTSPFRTVGAVEWDIAAASTYAANFAEEAGGTDHI 67
Query: 47 FPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I Q D DV+L G PCQ FS G
Sbjct: 68 YAGREDGDIIHWNPGQIKDDVDVILGGPPCQGFSSLG 104
>gi|218134306|ref|ZP_03463110.1| hypothetical protein BACPEC_02199 [Bacteroides pectinophilus ATCC
43243]
gi|217991681|gb|EEC57687.1| hypothetical protein BACPEC_02199 [Bacteroides pectinophilus ATCC
43243]
Length = 622
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 11/91 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAK- 58
M +I DLF G GG+ +E + + + + N + + GDI
Sbjct: 269 MFRILDLFSGAGGMSYGME---KNEHFTTEVALDFNEKALQTFKHNMPDTETVCGDITDE 325
Query: 59 ------IKTQDIPDHDVLLAGFPCQPFSQAG 83
I+ ++++ G PCQ FS G
Sbjct: 326 KIKAKVIELCKAKKVNMIIGGPPCQGFSLKG 356
>gi|153814224|ref|ZP_01966892.1| hypothetical protein RUMTOR_00433 [Ruminococcus torques ATCC 27756]
gi|145848620|gb|EDK25538.1| hypothetical protein RUMTOR_00433 [Ruminococcus torques ATCC 27756]
Length = 702
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 11/91 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAK- 58
M +I DLF G GG+ +E + + + + N + + GDI
Sbjct: 349 MFRILDLFSGAGGMSYGME---KNEHFTTEVALDFNEKALQTFKHNMPDTETVCGDITDE 405
Query: 59 ------IKTQDIPDHDVLLAGFPCQPFSQAG 83
I+ ++++ G PCQ FS G
Sbjct: 406 KIKAKVIELCKAKKVNMIIGGPPCQGFSLKG 436
>gi|239812977|ref|YP_002941924.1| DNA-cytosine methyltransferase [Geobacillus sp. WCH70]
gi|239809042|gb|ACS26105.1| DNA-cytosine methyltransferase [Geobacillus sp. WCH70]
Length = 370
Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 14/93 (15%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKI 59
M F G GG+ L +++ S EI Y Q ++ GDI +
Sbjct: 1 MANAISFFAGAGGLDLGIKRA----GFNILLSVEIEETYCQTLRQNFEGLNVVCGDIMEY 56
Query: 60 KTQ---------DIPDHDVLLAGFPCQPFSQAG 83
+ + + D+++ G PCQ FS AG
Sbjct: 57 SRERVYQEAGLAEHEEVDLMIGGSPCQSFSTAG 89
>gi|85703012|ref|ZP_01034116.1| DNA cytosine methyltransferase M.NgoMIII [Roseovarius sp. 217]
gi|85671940|gb|EAQ26797.1| DNA cytosine methyltransferase M.NgoMIII [Roseovarius sp. 217]
Length = 387
Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 13/92 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M++ +LF G GG+ + + Q + + ++ T + N L I
Sbjct: 1 MMRSVELFVGAGGLGIGVSQA----GFRPAAVMDWDRWACDTLRENKERGLDPIAHWPIH 56
Query: 61 TQD---------IPDHDVLLAGFPCQPFSQAG 83
D D++ G PCQPFS G
Sbjct: 57 EGDIRQFDFGTVDGTVDLVTGGPPCQPFSMGG 88
>gi|167746072|ref|ZP_02418199.1| hypothetical protein ANACAC_00767 [Anaerostipes caccae DSM 14662]
gi|167654587|gb|EDR98716.1| hypothetical protein ANACAC_00767 [Anaerostipes caccae DSM 14662]
Length = 476
Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------- 56
+ DLFCG GG+ L Q +++I P V TY N P+T I
Sbjct: 108 MIDLFCGAGGLSLGFTQ----NGFITSLANDIEPCCVDTYAHNHPDTPRENIILGDINNV 163
Query: 57 --AKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ Q DV++ G PCQ FS A
Sbjct: 164 IENITELQRFSSVDVVVGGPPCQGFSMA 191
>gi|159030572|emb|CAO88235.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 426
Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 31/90 (34%), Gaps = 15/90 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--------- 55
DLF G GG+ L LE + + E + + NFP
Sbjct: 8 IDLFAGCGGMSLGLEAA----GFDIAVAVEFDAVHSLVHHFNFPYCQTICRDIAKVTSRE 63
Query: 56 IAKIKTQDIPDHDV--LLAGFPCQPFSQAG 83
I ++ DV + G PCQ FS G
Sbjct: 64 IWELLKLKGYATDVSLIAGGPPCQGFSLIG 93
>gi|126659133|ref|ZP_01730272.1| site-specific DNA-methyltransferase M.NgoVII [Cyanothece sp.
CCY0110]
gi|126619540|gb|EAZ90270.1| site-specific DNA-methyltransferase M.NgoVII [Cyanothece sp.
CCY0110]
Length = 346
Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAG 73
+ L + ++++I+ + +TY+ N N ++ DIA I +DIP D+++ G
Sbjct: 1 MDLGFVNA----GYKIIWANDIDSDACQTYKNNIGNHIVKSDIANINLKDIPKCDIIIGG 56
Query: 74 FPCQPFSQ 81
FPCQ FS
Sbjct: 57 FPCQDFSL 64
>gi|308229522|gb|ADO24174.1| M.AclI [Acinetobacter calcoaceticus]
Length = 458
Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 33/90 (36%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
LK LF G GG+ L V E + + + DI +
Sbjct: 121 LKAISLFSGCGGLCLGFSAA----GVRIAGFIEKDKHISQIYRDNFSSTPQLANDITSLS 176
Query: 61 TQDI-------PDHDVLLAGFPCQPFSQAG 83
+DI + D+++ G PCQ FS +G
Sbjct: 177 HKDIEQYKDSIGEIDIVIGGPPCQGFSLSG 206
>gi|329767389|ref|ZP_08258914.1| hypothetical protein HMPREF0428_00611 [Gemella haemolysans M341]
gi|328836078|gb|EGF85769.1| hypothetical protein HMPREF0428_00611 [Gemella haemolysans M341]
Length = 144
Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLF G+GG+ E ++E++ + + + +I DI+K+
Sbjct: 5 VIDLFSGVGGLSKGF----FDSGFEIVLANEVDYSIANSYKKNHPKVKMINEDISKLDID 60
Query: 63 D----IPDHDVLLAGFPCQPFSQAG 83
D + DV++ G PCQ FSQ G
Sbjct: 61 DVFNEYKNIDVIVGGPPCQGFSQKG 85
>gi|298374832|ref|ZP_06984790.1| cytosine-specific methyltransferase [Bacteroides sp. 3_1_19]
gi|298269200|gb|EFI10855.1| cytosine-specific methyltransferase [Bacteroides sp. 3_1_19]
Length = 403
Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 35/99 (35%), Gaps = 22/99 (22%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----------VKTYQANFPNTL 51
K DLF G GG+ L L + + F+ E +P++ K +
Sbjct: 9 KYIDLFAGCGGLSLGLHLS----GWKGLFAIEKSPFAFETLKYNLIDNKKHFDWPSWLEC 64
Query: 52 IFGDIAKIKTQDI-------PDHDVLLAGFPCQPFSQAG 83
DI + D++ G PCQ FS AG
Sbjct: 65 KEHDIYDVLKSHQEQLKSLRGTIDLVAGGPPCQGFSMAG 103
>gi|167461751|ref|ZP_02326840.1| site-specific DNA-methyltransferase [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 350
Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
++ LF GIGGI L + +E E + + + ++P+ I+ D+ +
Sbjct: 1 MRKLSLFSGIGGIDLAAKWA----GIETVAFCEKESFPQQVLRKHWPDIPIYDDVCALTR 56
Query: 60 -------KTQDIPDHDVLLAGFPCQPFSQAG 83
D++ AG+PCQPFS AG
Sbjct: 57 EVLEQDGIITRNRTIDLISAGYPCQPFSNAG 87
>gi|192292294|ref|YP_001992899.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1]
gi|192286043|gb|ACF02424.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1]
Length = 500
Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 18/95 (18%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY----QANFPNTLIFGDIAK 58
++ DLF G GG+ L E + E +P + K++ A P + DI+
Sbjct: 21 RVLDLFSGCGGLSLGFH----AVGCEIVAAVEHDPDAAKSHGLNFHAGSPVHMEPRDISS 76
Query: 59 IKT----------QDIPDHDVLLAGFPCQPFSQAG 83
DV++ G PCQ F++ G
Sbjct: 77 TPPANLTKALGLGHHSLAFDVVIGGPPCQAFARVG 111
>gi|60202518|gb|AAX14650.1| BbvCI methyltransferase 1 [Brevibacillus brevis]
Length = 429
Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
L DLF G GG L + E++ ++ +T++ NFP T + DI +I
Sbjct: 19 LTAIDLFAGAGGFSLGFSMA----GFRVTHAIEVDKWAAETFEVNFPRTKVVTRDIQQIS 74
Query: 61 TQDIPDHD-----VLLAGFPCQPFS 80
++I D V++ G PCQ FS
Sbjct: 75 DEEIKDIIDERPLVVIGGPPCQGFS 99
>gi|294667855|ref|ZP_06733064.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292602358|gb|EFF45800.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 410
Score = 70.0 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIK 60
L DLF G GG+ L + +++EI+P Y+ + + DI K+
Sbjct: 11 LTSLDLFAGAGGLSEGLREA----GFTSLYANEISPRYAQTYAVNHPGTQVDSQDIRKVD 66
Query: 61 TQD--------IPDHDVLLAGFPCQPFSQ 81
+ + D++ G PCQ FS
Sbjct: 67 ARKVRKLLGLKRGELDLIAGGPPCQGFSI 95
>gi|309789605|ref|ZP_07684186.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides
DG6]
gi|308228341|gb|EFO81988.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides
DG6]
Length = 342
Score = 70.0 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Query: 2 LKITDLFCGIGGIRLDLE-QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+ + DLF G GG+ L E Q E +P + +TY N + +
Sbjct: 21 ISVLDLFAGCGGLALGFEAQGLKTHGF------EKDPDAAQTYCNNLGSPCEH--VELSI 72
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
P DV++ G PCQPFS G
Sbjct: 73 DTVYPQADVVIGGPPCQPFSVGG 95
>gi|254456253|ref|ZP_05069682.1| Cytosine-specific methyltransferase HphIA [Candidatus
Pelagibacter sp. HTCC7211]
gi|207083255|gb|EDZ60681.1| Cytosine-specific methyltransferase HphIA [Candidatus
Pelagibacter sp. HTCC7211]
Length = 342
Score = 70.0 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI--AK 58
ML + D F G GG+ ++ + + + +KT+ NF ++
Sbjct: 1 MLSVNDFFSGCGGLSQGFKEA----GFKIQVAVDKEEAFLKTFSHNFKDSQTKNLDLGDS 56
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
DIP D+++AG PCQ FS G
Sbjct: 57 KTLNDIPKSDIIIAGPPCQGFSITG 81
>gi|90420969|ref|ZP_01228873.1| possible cytosine-specific DNA methylase [Aurantimonas
manganoxydans SI85-9A1]
gi|90334747|gb|EAS48523.1| possible cytosine-specific DNA methylase [Aurantimonas
manganoxydans SI85-9A1]
Length = 541
Score = 70.0 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ DL+ GIGG L L VE S E +V T+ N L D+ ++
Sbjct: 1 MRAIDLYAGIGGWSLGLRLA----GVEVVASYEWWQAAVDTHNGNHGGDLKPVDVRQLHL 56
Query: 62 QD-IPDHDVLLAGFPCQPFS 80
D P+ D+++ PC FS
Sbjct: 57 HDLPPNIDLVVGSPPCTEFS 76
>gi|331090172|ref|ZP_08339060.1| hypothetical protein HMPREF1025_02643 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330402118|gb|EGG81690.1| hypothetical protein HMPREF1025_02643 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 681
Score = 70.0 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF G GG L + ++SEI P+ ++ P +GD++++
Sbjct: 6 LTLGSLFDGSGGFPLG----GLISGITPVWASEIEPFPIRVTTKRLPFMKHYGDVSRMDG 61
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
I D++ G PCQ S AG
Sbjct: 62 GKIEPVDIITFGSPCQDMSIAG 83
>gi|310817513|ref|YP_003949871.1| cytosine-specific methyltransferase [Stigmatella aurantiaca
DW4/3-1]
gi|309390585|gb|ADO68044.1| Cytosine-specific methyltransferase [Stigmatella aurantiaca
DW4/3-1]
Length = 332
Score = 70.0 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
L ++ G GG + L+ E + EI+ ++ T + + D+
Sbjct: 12 LTAIEICAGAGGQAIGLDMA----GFEHVAAVEIDKHACATLRLNRPQWRVFEEDLKDFS 67
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+L G PC PFS AG
Sbjct: 68 GSSFRGVDLLAGGVPCPPFSIAG 90
>gi|289191821|ref|YP_003457762.1| DNA-cytosine methyltransferase [Methanocaldococcus sp. FS406-22]
gi|288938271|gb|ADC69026.1| DNA-cytosine methyltransferase [Methanocaldococcus sp. FS406-22]
Length = 310
Score = 70.0 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + DLF G GG N + + E VKTY N + DI +I
Sbjct: 1 MNVIDLFSGCGGFSKGF----LDENFKILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPP 56
Query: 62 ------QDIPDHDVLLAGFPCQPFSQA 82
DV++ PC+PF++A
Sbjct: 57 KAFDEFIKNEKVDVIIGSPPCEPFTKA 83
>gi|229148238|ref|ZP_04276541.1| Phage-related DNA methylase [Bacillus cereus BDRD-ST24]
gi|228635250|gb|EEK91777.1| Phage-related DNA methylase [Bacillus cereus BDRD-ST24]
Length = 180
Score = 70.0 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
L DLF G+G +R+ LEQ C E N + KTY + DI
Sbjct: 3 LTFIDLFAGVGMMRIGLEQA----GHTCIGFCEWNEPARKTYEAMHDTEGEWTEHDIRNA 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K IP D+ AGFPC S+ G
Sbjct: 59 KGTTIPRADIWTAGFPCTDISKNG 82
>gi|194337838|ref|YP_002019632.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194310315|gb|ACF45015.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 409
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
+K ++F G GG+ LE + E E N ++ ++ + P + FGDI
Sbjct: 1 MKTLEIFSGAGGLAKGLELS----GFEHTAFVEFNKHACESLSENFDPARVFFGDIKDFD 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ D D++ G PCQPFS G
Sbjct: 57 LDSLEDIDIVAGGPPCQPFSLGG 79
>gi|289167785|ref|YP_003446054.1| site-specific DNA methylase [Streptococcus mitis B6]
gi|288907352|emb|CBJ22189.1| site-specific DNA methylase [Streptococcus mitis B6]
Length = 351
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
I DLF G GG+ E + + +++T+Q N N+ I GDIA I
Sbjct: 4 YNIVDLFSGAGGLSYGFEMA----GFNVLLGIDNDEKALETFQKNHQNSEILCGDIANIS 59
Query: 61 TQDI-------PDHDVLLAGFPCQPFSQAG 83
++ D+++ G PCQ S +G
Sbjct: 60 YEEDIKPIIGEQKIDIIVGGPPCQGMSLSG 89
>gi|240142441|ref|YP_002966951.1| Site-specific DNA-methyltransferase [Methylobacterium extorquens
AM1]
gi|240012385|gb|ACS43610.1| Site-specific DNA-methyltransferase [Methylobacterium extorquens
AM1]
Length = 463
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLF G GG L + S EI+P + T+ ANFP + F D +
Sbjct: 13 VLDLFSGCGGFSLGFQAA----GFRIAGSVEIDPSARATHAANFPEAVHFDDATTADPAE 68
Query: 64 IPDH------DVLLAGFPCQPFSQAG 83
+ VL+ G PCQ +++ G
Sbjct: 69 VGACLAGAPFTVLVGGPPCQAYARVG 94
>gi|148988375|ref|ZP_01819822.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae
SP6-BS73]
gi|147926056|gb|EDK77130.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae
SP6-BS73]
Length = 351
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
I DLF G GG+ E + + +++T+Q N N+ I GDIA I
Sbjct: 4 YNIVDLFSGAGGLSYGFEMA----GFNVLLGIDNDEKALETFQKNHQNSEILCGDIANIS 59
Query: 61 TQDI-------PDHDVLLAGFPCQPFSQAG 83
++ D+++ G PCQ S +G
Sbjct: 60 YEEDIKPIIGEQKIDIIVGGPPCQGMSLSG 89
>gi|167630968|ref|YP_001681467.1| DNA-cytosine methyltransferase [Heliobacterium modesticaldum
Ice1]
gi|167593708|gb|ABZ85456.1| DNA-cytosine methyltransferase [Heliobacterium modesticaldum
Ice1]
Length = 667
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF G GG L + ++SEI P+ ++ P +GDI+ I
Sbjct: 5 LTLGSLFDGSGGFPLGA----VLNGITPVWASEIEPFPIRVTTRRLPQMKHYGDISCING 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+I D++ G PC S AG
Sbjct: 61 TEIEPVDIISFGSPCTDMSVAG 82
>gi|291519163|emb|CBK74384.1| DNA-methyltransferase (dcm) [Butyrivibrio fibrisolvens 16/4]
Length = 406
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 14/92 (15%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------NT 50
I +LF G+GG RL E+ + + S+ P + +
Sbjct: 4 TICELFAGVGGFRLGFERL--NTGWNTTWFSQWEPEKKNQWAHDCYVEHFGDLPDLQGEF 61
Query: 51 LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
DI+ I +IPDH++L+ GFPCQ +S A
Sbjct: 62 HTGEDISIINKDNIPDHNLLVGGFPCQDYSVA 93
>gi|126740127|ref|ZP_01755817.1| DNA modification methylase M.NGOI [Roseobacter sp. SK209-2-6]
gi|126718946|gb|EBA15658.1| DNA modification methylase M.NGOI [Roseobacter sp. SK209-2-6]
Length = 319
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKI 59
ML +L G GG L LE+ + EI+ + T ++ D+
Sbjct: 1 MLTSVELCAGAGGQALGLEKA----GFDHTALVEIDKHCCATLRHNRPSWNVLEEDVRNF 56
Query: 60 KTQ--DIPDHDVLLAGFPCQPFSQAG 83
K + D+L G PC PFS AG
Sbjct: 57 KEVAGNYRGIDLLAGGLPCPPFSVAG 82
>gi|291618717|ref|YP_003521459.1| HsdRM [Pantoea ananatis LMG 20103]
gi|291153747|gb|ADD78331.1| HsdRM [Pantoea ananatis LMG 20103]
Length = 313
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M + LF G GG + +++I PY+ Y AN P T +
Sbjct: 1 MPTVVSLFSGCGGSDAGVVNA----GFNVLMANDILPYARDVYLANHPETDYVLG-SVDN 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ P D+L+ +PCQ FSQ G
Sbjct: 56 IKHFPKADLLVGCYPCQGFSQGG 78
>gi|119483468|ref|ZP_01618882.1| site-specific DNA-methyltransferase [Lyngbya sp. PCC 8106]
gi|119458235|gb|EAW39357.1| site-specific DNA-methyltransferase [Lyngbya sp. PCC 8106]
Length = 407
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 11/87 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
K+ D+F G GG L + EI+ ++ + I+
Sbjct: 5 FKVLDIFAGAGGFSLGFKMA----GGTLVGGIEIDQWAGETLAYNHPETQIVIRDIQTIS 60
Query: 58 K---IKTQDIPDHDVLLAGFPCQPFSQ 81
I +V++ G PCQ FS
Sbjct: 61 DEEAISLFKYNKPNVIIGGPPCQGFSV 87
>gi|315587009|gb|ADU41390.1| C-5 cytosine-specific DNA methylase [Helicobacter pylori 35A]
Length = 313
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+P
Sbjct: 2 DFCSGIGGGRLGLEQ----CHLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLP 57
Query: 66 DHDVLLAGFPCQPFSQAG 83
D DVL++GFPCQ FS G
Sbjct: 58 DFDVLISGFPCQAFSING 75
>gi|296110061|ref|YP_003617010.1| DNA-cytosine methyltransferase [Methanocaldococcus infernus ME]
gi|295434875|gb|ADG14046.1| DNA-cytosine methyltransferase [Methanocaldococcus infernus ME]
Length = 309
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + DLF G GG + + E +V+TY N + DI ++
Sbjct: 1 MNLIDLFSGCGGFSKGF----LDQGFNILGAIENFKPAVETYIYNIKAKVWMEDIKRVPP 56
Query: 62 QDI------PDHDVLLAGFPCQPFSQA 82
+ D+++ PC+PF++A
Sbjct: 57 KAFDKFIGEEKVDLIIGSPPCEPFTKA 83
>gi|327463101|gb|EGF09422.1| modification methylase DdeI [Streptococcus sanguinis SK1]
Length = 351
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
I DLF G GG+ E + + +++T++ N N+ + GDI I
Sbjct: 4 YNIIDLFSGAGGLSYGFEAA----GFNVLLGIDNDEKALETFRKNHKNSKVLCGDITNIS 59
Query: 61 TQDI-------PDHDVLLAGFPCQPFSQAG 83
++ D+++ G PCQ S +G
Sbjct: 60 YEEDIKPIIGEQKVDLIVGGPPCQGMSLSG 89
>gi|332652901|ref|ZP_08418646.1| DNA (cytosine-5-)-methyltransferase [Ruminococcaceae bacterium
D16]
gi|332518047|gb|EGJ47650.1| DNA (cytosine-5-)-methyltransferase [Ruminococcaceae bacterium
D16]
Length = 542
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF G GG+ L QT + + + E +PY +TY+ N P + GD+
Sbjct: 4 YTAVDLFAGAGGLSLGFMQT---QKYDIKVAFENSPYMQETYRQNHPGVEVQGDVCTADY 60
Query: 62 QD----IPDHDVLLAGFPCQPFSQA 82
+D DV++ G PCQ FS A
Sbjct: 61 EDIMRRYGKIDVVIGGPPCQGFSNA 85
>gi|67920370|ref|ZP_00513890.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH
8501]
gi|67857854|gb|EAM53093.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH
8501]
Length = 339
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 27/80 (33%), Gaps = 7/80 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLF G GG+ L E + E + + I
Sbjct: 23 VLDLFAGCGGLSLGFE----AQGFETYG---FEKEQDCCHSYEKNLRGKCEQIELTVNSK 75
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
+ V++ G PCQPFS G
Sbjct: 76 LSGASVIIGGPPCQPFSVGG 95
>gi|109947180|ref|YP_664408.1| C-5 cytosine-specific DNA methylase [Helicobacter acinonychis
str. Sheeba]
gi|109714401|emb|CAJ99409.1| C-5 cytosine-specific DNA methylase [Helicobacter acinonychis
str. Sheeba]
Length = 315
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
D GIGG RL LE +++C +EIN +++TY+ F +T FGD+ +I D+P
Sbjct: 2 DFCSGIGGGRLGLE----RCHLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLP 57
Query: 66 DHDVLLAGFPCQPFSQAG 83
D DVL++GFPCQ FS G
Sbjct: 58 DFDVLISGFPCQAFSING 75
>gi|228899601|ref|ZP_04063856.1| Modification methylase SinI [Bacillus thuringiensis IBL 4222]
gi|228860031|gb|EEN04436.1| Modification methylase SinI [Bacillus thuringiensis IBL 4222]
Length = 362
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ F G GG+ + + + + S EI +T + N P+ + +
Sbjct: 1 MNCISFFAGAGGLDMGIHKA----GFDVRVSVEIESVYCETLRMNHPDWNVVEGDIMMYN 56
Query: 62 QDI---------PDHDVLLAGFPCQPFSQAG 83
++ + D+++ G PCQ FS AG
Sbjct: 57 KEKVLEQANLKEGEVDLMIGGSPCQSFSTAG 87
>gi|325678044|ref|ZP_08157681.1| putative DNA (cytosine-5-)-methyltransferase [Ruminococcus albus
8]
gi|324110261|gb|EGC04440.1| putative DNA (cytosine-5-)-methyltransferase [Ruminococcus albus
8]
Length = 324
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTF-------NHRNVECFFSSEINPYSVKTYQ-ANFPNTLI 52
M + LFCG GG + F + FS +I+ ++ TY+ + +I
Sbjct: 1 MYNVVSLFCGCGGADMGTVGGFVFNKKKYKKHPCKLVFSCDIDQKAIDTYKANFNSDEVI 60
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
GD+ + ++++P D+L GFPCQ FS
Sbjct: 61 CGDVCDLPSENVPPCDILTGGFPCQSFST 89
>gi|229143653|ref|ZP_04272076.1| DNA-cytosine methyltransferase [Bacillus cereus BDRD-ST24]
gi|228639832|gb|EEK96239.1| DNA-cytosine methyltransferase [Bacillus cereus BDRD-ST24]
Length = 538
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 14/90 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------FGD 55
+K+ DLFCG GG E+ E + +I ++ T+ N N +
Sbjct: 1 MKVIDLFCGAGGFSEGFERA----GFEIVRAYDIWAPAILTHNQNHGNGKQIAFKGDIYE 56
Query: 56 IAKIKTQDI----PDHDVLLAGFPCQPFSQ 81
I+ + ++ PD +V++ PC FS
Sbjct: 57 ISMLDNEEFEKWIPDTEVIIGSPPCIAFSN 86
>gi|145218883|ref|YP_001129592.1| DNA-cytosine methyltransferase [Prosthecochloris vibrioformis DSM
265]
gi|145205047|gb|ABP36090.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM
265]
Length = 377
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIK 60
L +LFCG GG+ + L + ++EI P ++ + ++ DI I
Sbjct: 5 LNAVELFCGAGGLSIGLSRA----GFHIALANEIEPDFAATFSLNHPETKMLNEDIHDID 60
Query: 61 TQDIPDHDVLL------AGFPCQPFSQAG 83
+ G PCQ FS G
Sbjct: 61 FARESLKTGITDVTLVSGGPPCQGFSTVG 89
>gi|317489194|ref|ZP_07947712.1| C-5 cytosine-specific DNA methylase [Eggerthella sp. 1_3_56FAA]
gi|325832321|ref|ZP_08165320.1| DNA (cytosine-5-)-methyltransferase [Eggerthella sp. HGA1]
gi|316911702|gb|EFV33293.1| C-5 cytosine-specific DNA methylase [Eggerthella sp. 1_3_56FAA]
gi|325486157|gb|EGC88611.1| DNA (cytosine-5-)-methyltransferase [Eggerthella sp. HGA1]
Length = 447
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ LF GI + E SEI+P+ FP+ GDI+K++
Sbjct: 1 MRYVSLFSGI----EAASCAWGPLGWEAVAFSEIDPFCNAVLATRFPSVPNLGDISKVEW 56
Query: 62 QDI-PDHDVLLAGFPCQPFSQAG 83
+++ + DV++ G PCQ FS AG
Sbjct: 57 KEMRGEIDVVIGGSPCQSFSVAG 79
>gi|158339669|ref|YP_001520676.1| C-5 cytosine-specific DNA methylase [Acaryochloris marina
MBIC11017]
gi|158309910|gb|ABW31526.1| C-5 cytosine-specific DNA methylase [Acaryochloris marina
MBIC11017]
Length = 382
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---IFGDIAKIK 60
+ D+FCG GG+ L ++ + + NP++VKT+ NFP DI I+
Sbjct: 1 MLDIFCGAGGMSLGFQKA----GCKILGGIDNNPHAVKTHHQNFPKCKLKLDATDIRDIE 56
Query: 61 T-----QDIPDHDVLLAGFPCQPFSQAG 83
D + D+L+ G PCQ FS+ G
Sbjct: 57 NLEDLGIDPKEVDILIGGPPCQVFSRVG 84
>gi|153855943|ref|ZP_01996894.1| hypothetical protein DORLON_02919 [Dorea longicatena DSM 13814]
gi|149751791|gb|EDM61722.1| hypothetical protein DORLON_02919 [Dorea longicatena DSM 13814]
Length = 433
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------- 55
I +LF G+GG RL ++ E + S+ P K + +
Sbjct: 4 TICELFAGVGGFRLGFDKL--ESGWETTWFSQWEPGKKKQWAHDCYVYHYGDCADLKGEF 61
Query: 56 -----IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
I+++ +IP+H++L+ GFPCQ +S A
Sbjct: 62 HTGEDISQMNKNNIPNHNLLVGGFPCQDYSVA 93
>gi|88854619|ref|ZP_01129286.1| C-5 cytosine-specific DNA methylase family protein [marine
actinobacterium PHSC20C1]
gi|88816427|gb|EAR26282.1| C-5 cytosine-specific DNA methylase family protein [marine
actinobacterium PHSC20C1]
Length = 352
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--IAKIKT 61
+ DLF G GG+ ++ E + E + + +Y+A F +++ +++
Sbjct: 1 MIDLFAGAGGLTAGFKKA--SARYETVRAVEWDTAAAASYEATFGPDIVYSGSIQDWLES 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ +P D+++ G PCQ FS G
Sbjct: 59 EKVPRADLIVGGPPCQGFSTLG 80
>gi|197124333|ref|YP_002136284.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K]
gi|196174182|gb|ACG75155.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K]
Length = 657
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 14/91 (15%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLFCG GG+ + + + +P ++KT N P+ I+ +
Sbjct: 264 TVVDLFCGAGGLSEGFTRA----GFRLVAAVDRDPVALKTLWLNHPSLGRERTISTDVRE 319
Query: 63 DIPDH----------DVLLAGFPCQPFSQAG 83
P DVL+ PCQ FS G
Sbjct: 320 LAPARLKKLLGRRRLDVLVGAPPCQGFSTVG 350
>gi|307294815|ref|ZP_07574657.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
gi|306879289|gb|EFN10507.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
Length = 394
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 14/92 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---------FPNTLI 52
++ +LF G GG+ + + + + E + + T + N
Sbjct: 7 MRAIELFAGAGGLGMGISKA----GFQPTQVVEWDRWCCDTLRENRQAKSGGIGHWPLPT 62
Query: 53 FGDIAKIKTQDI-PDHDVLLAGFPCQPFSQAG 83
GDI + + D++ G PCQPFS G
Sbjct: 63 EGDIRLVDFRKHEGKIDLVTGGPPCQPFSLGG 94
>gi|166364460|ref|YP_001656733.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
gi|166086833|dbj|BAG01541.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 420
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 31/90 (34%), Gaps = 15/90 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--------- 55
DLF G GG+ L LE + + E + + NFP
Sbjct: 8 IDLFAGCGGMSLGLEAA----GFDIAVAVEFDAVHSLVHHFNFPYCQTICRDIAKVTSRE 63
Query: 56 IAKIKTQDIPDHDV--LLAGFPCQPFSQAG 83
I ++ DV + G PCQ FS G
Sbjct: 64 ILELLKLKGYATDVSLIAGGPPCQGFSLIG 93
>gi|119513855|ref|ZP_01632813.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia
spumigena CCY9414]
gi|119461493|gb|EAW42572.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia
spumigena CCY9414]
Length = 318
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 16/93 (17%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKT 61
KI DLF G GG+ + E + +I+ + +I DI ++
Sbjct: 4 KIIDLFAGAGGLTTGFDM----EGFESLCAIDIDAKALATYKHNYPNTKIIHQDIRQVNP 59
Query: 62 QD--------IPDHDVLLAGFPCQPFSQ---AG 83
D + VL+ G PCQ FS+ AG
Sbjct: 60 SDLRLALGLRQEELTVLIGGPPCQGFSRNTPAG 92
>gi|40063394|gb|AAR38205.1| C-5 cytosine-specific DNA methylase [uncultured marine bacterium
580]
Length = 435
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 26/107 (24%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV---------------ECFFSSEINP--------Y 38
LK+ +LF G+GG RL LE +++ E +S++ P
Sbjct: 4 LKVAELFAGVGGFRLGLEGWKKNKDFFSASSDYKKKMPPLFEVVWSNQFEPLTKSQPASD 63
Query: 39 SVKTYQANFPNTLIFGDIAKIKTQDI---PDHDVLLAGFPCQPFSQA 82
+ + + DI + DI P HD+L+ GFPCQ +S A
Sbjct: 64 IYEQRFNSSTSLHSRVDIEHLVKNDIHSIPFHDLLVGGFPCQDYSVA 110
>gi|254671395|emb|CBA08869.1| hypothetical protein NME_1963 [Neisseria meningitidis alpha153]
gi|316984659|gb|EFV63623.1| modification methylase NlaIV domain protein [Neisseria
meningitidis H44/76]
Length = 86
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K DLF + GIR EQ ++V EC F+SEI P +++ + N+P+ + +GDI KI
Sbjct: 4 IKFIDLFSEMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDEVPYGDITKI 63
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+T DIPD D+LLAGFPCQ FS A
Sbjct: 64 ETGDIPDFDILLAGFPCQAFSFA 86
>gi|261402489|ref|YP_003246713.1| DNA-cytosine methyltransferase [Methanocaldococcus vulcanius M7]
gi|261369482|gb|ACX72231.1| DNA-cytosine methyltransferase [Methanocaldococcus vulcanius M7]
Length = 310
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + DLF G GG N + E VKTY N + DI +I
Sbjct: 1 MNVIDLFSGCGGFSKGF----LDENFRILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPP 56
Query: 62 ------QDIPDHDVLLAGFPCQPFSQA 82
DV++ PC+PF++A
Sbjct: 57 KAFDEFIKNEKVDVIIGSPPCEPFTKA 83
>gi|15668743|ref|NP_247542.1| type II R/M system modification methyltransferase
[Methanocaldococcus jannaschii DSM 2661]
gi|2500153|sp|Q57983|MT51_METJA RecName: Full=Probable modification methylase MJ0563; AltName:
Full=Cytosine-specific methyltransferase MJ0563;
AltName: Full=M.MjaVIIIP
gi|1591269|gb|AAB98555.1| modification methylase, type II R/M system [Methanocaldococcus
jannaschii DSM 2661]
Length = 310
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + DLF G GG N + E VKTY N + DI +I
Sbjct: 1 MNVIDLFSGCGGFSKGF----LDENFRILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPP 56
Query: 62 ------QDIPDHDVLLAGFPCQPFSQA 82
DV++ PC+PF++A
Sbjct: 57 KAFDEFIKNEKVDVIIGSPPCEPFTKA 83
>gi|4033740|gb|AAC97192.1| modification methylase M.NspHI [Nostoc sp. ATCC 29106]
Length = 397
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
DLFCG GGI L Q + S E + + + GDI +
Sbjct: 60 YNFVDLFCGAGGITQGLIQA----GFQALASVETSSIASATHQRNFPHCHHFCGDIEQFS 115
Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83
+ P+ ++++ G PCQ FS AG
Sbjct: 116 PKIWLKQIGSPEVNLVVGGPPCQGFSVAG 144
>gi|213692102|ref|YP_002322688.1| C-5 cytosine-specific DNA methylase [Bifidobacterium longum
subsp. infantis ATCC 15697]
gi|213523563|gb|ACJ52310.1| C-5 cytosine-specific DNA methylase [Bifidobacterium longum
subsp. infantis ATCC 15697]
gi|320458217|dbj|BAJ68838.1| hypothetical phage protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 880
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP--YSVKTYQANFPNTLIFGDIAKIKT 61
I LF G GG+ L ++ + ++S+I P ++++Y A+ + GDI I
Sbjct: 11 IGSLFSGYGGLDLGVDMALGG-GMRVAYTSDIEPGPCAIESYHAHGDDCPNLGDITGIDF 69
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ +PD DV++ G PCQ S AG
Sbjct: 70 EKLPDTDVVVGGSPCQSLSLAG 91
>gi|20094956|ref|NP_614803.1| site-specific DNA methylase [Methanopyrus kandleri AV19]
gi|19888204|gb|AAM02733.1| Site-specific DNA methylase [Methanopyrus kandleri AV19]
Length = 315
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIKT 61
K+ DLFCG GG ++ + E NP + + +I DI ++ +
Sbjct: 4 KVVDLFCGAGGFSRGFKEA----GFKILGGVENNPAPAATYRENFPEAEVIERDIQRVDS 59
Query: 62 QDI----PDHDVLLAGFPCQPFSQA 82
++I + DV++ G PC+PF+ A
Sbjct: 60 EEIVDELGEPDVIIGGPPCEPFTAA 84
>gi|26990694|ref|NP_746119.1| DNA-cytosine methyltransferase [Pseudomonas putida KT2440]
gi|24985686|gb|AAN69583.1|AE016592_2 DNA-cytosine methyltransferase [Pseudomonas putida KT2440]
Length = 348
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 16/92 (17%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--------- 53
K+ LFCG GG+ L + F+++ + Y+V+TY N P
Sbjct: 24 KLVSLFCGAGGLDLGFIDA----GFDVVFAADHDRYAVETYNHNHPGQRASKVDLLETSP 79
Query: 54 ---GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ ++ ++ G PCQ FS+A
Sbjct: 80 EELYKRSVLEPGFEGAIHGIIGGPPCQGFSRA 111
>gi|209524941|ref|ZP_03273486.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209494590|gb|EDZ94900.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 442
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Query: 2 LKITDLFCGIGGIRLDLE-QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
DLF GIGG R+ LE ++ I Y + + GD+ +
Sbjct: 15 FTFVDLFSGIGGFRIALENWGGKCLGYSEIAANSIQVYKQNFIRDANLDEPNLGDMRSLH 74
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D++ G PCQP+S AG
Sbjct: 75 KLPF-TVDLITGGVPCQPWSIAG 96
>gi|120402107|ref|YP_951936.1| DNA-cytosine methyltransferase [Mycobacterium vanbaalenii PYR-1]
gi|119954925|gb|ABM11930.1| DNA-cytosine methyltransferase [Mycobacterium vanbaalenii PYR-1]
Length = 386
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
LF G GG+ L E + + ++ + +P++V+TYQ N ++ GD+ ++
Sbjct: 18 VSLFAGCGGMDLGAEASRAA---KVVWAIDSDPWAVQTYQRNIGKHIVEGDVTTTPVPEV 74
Query: 65 PDHDVLLAGFPCQPFSQ 81
P DVLLAG PCQ +S
Sbjct: 75 PC-DVLLAGPPCQDYST 90
>gi|157953197|ref|YP_001498088.1| hypothetical protein AR158_C006R [Paramecium bursaria Chlorella
virus AR158]
gi|156067845|gb|ABU43552.1| hypothetical protein AR158_C006R [Paramecium bursaria Chlorella
virus AR158]
Length = 333
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ LF G GG ++ ++ SE++ ++KT+ N P+ + GD++ I
Sbjct: 4 LRAISLFAGAGGDTFGMKMA----GIDVVAFSELDIDAIKTHNRNNPDCVALGDVSLIDE 59
Query: 62 QD----IPDHDVLLAGFPCQPFSQAG 83
+ + D++ AGFPCQ FS AG
Sbjct: 60 TMLSPFVDNVDIIFAGFPCQGFSNAG 85
>gi|322418052|ref|YP_004197275.1| DNA-cytosine methyltransferase [Geobacter sp. M18]
gi|320124439|gb|ADW11999.1| DNA-cytosine methyltransferase [Geobacter sp. M18]
Length = 385
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 33/91 (36%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--------KTYQANFPNTLIF 53
++ +LF G GG+ + L E N + K
Sbjct: 1 MRSVELFSGCGGLAMGLSLA----GFHHELMVEWNTNACETLAHNKKKKVNHVKSWPFKK 56
Query: 54 GDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83
GD+ +I DI D++ G PCQPFS G
Sbjct: 57 GDVREINWTDIRRPIDLVAGGPPCQPFSIGG 87
>gi|167461724|ref|ZP_02326813.1| site-specific DNA-methyltransferase [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 345
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
++ LF GIGGI L + T +E E + + + ++P+ I+ D+ +
Sbjct: 1 MRKLSLFSGIGGIDLAAKWT----GIETVAFCEKESFPQQVLRKHWPDIPIYDDVCALTR 56
Query: 60 -------KTQDIPDHDVLLAGFPCQPFSQAG 83
D++ AG+PCQPFS AG
Sbjct: 57 EVLEQDGIITRNRTIDLISAGYPCQPFSNAG 87
>gi|288922732|ref|ZP_06416903.1| C-5 cytosine-specific DNA methylase [Frankia sp. EUN1f]
gi|288345909|gb|EFC80267.1| C-5 cytosine-specific DNA methylase [Frankia sp. EUN1f]
Length = 174
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ L G GG+ L + Q + ++ +P + + ++P+ GDI +
Sbjct: 8 LRVGSLCSGYGGLDLAVHQ---VIGGRLAWVADPDPGAARILARHWPDVPNHGDITAVDW 64
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ D+L AGFPCQP+S AG
Sbjct: 65 TTVEPIDLLTAGFPCQPWSDAG 86
>gi|46019826|emb|CAE52348.1| putative cytosine-specific methyltransferase [Streptococcus
thermophilus]
Length = 365
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--------TLIF 53
+ DLF G GG+ +Q + + ++KTY+ N +
Sbjct: 4 YNVVDLFSGAGGLSQGFKQA----GFNILMGVDFDDPALKTYKHNLKDSVALKADLFDEE 59
Query: 54 GDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83
I I+ + DV++AG PCQ FS G
Sbjct: 60 SAIKDIENNLNGNKIDVIIAGPPCQGFSLTG 90
>gi|167630879|ref|YP_001681378.1| DNA-cytosine methyltransferase [Heliobacterium modesticaldum
Ice1]
gi|167593619|gb|ABZ85367.1| DNA-cytosine methyltransferase [Heliobacterium modesticaldum
Ice1]
Length = 319
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 28/84 (33%), Gaps = 5/84 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKI 59
M ++ G GG L LE E EI Y +I D+
Sbjct: 3 MFTSVEICAGAGGQALGLEMA----GFEHVALVEIEKEYCTTLKLNRPKWNVINEDVRLF 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D+L G PC PFS AG
Sbjct: 59 DGNAYRGIDLLAGGVPCPPFSVAG 82
>gi|160883583|ref|ZP_02064586.1| hypothetical protein BACOVA_01555 [Bacteroides ovatus ATCC 8483]
gi|156110996|gb|EDO12741.1| hypothetical protein BACOVA_01555 [Bacteroides ovatus ATCC 8483]
Length = 417
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 16/96 (16%)
Query: 4 ITDLFCGIGGIRLDLEQTFNH---------RNVECFFSSEINPYSVKTYQANFPNTLIFG 54
+ DLF G GG+ L L + E + I+ + +Q +
Sbjct: 9 VIDLFSGCGGLSLGLHKAGWRGLFAVEKCTDAFETLKYNLIDNKTDPHFQWPKWLPIKNW 68
Query: 55 DIAKIKTQD-------IPDHDVLLAGFPCQPFSQAG 83
+I + D++ G PCQ FS AG
Sbjct: 69 EIDTLLENYSFQLSNLRNKIDLVAGGPPCQGFSMAG 104
>gi|254413051|ref|ZP_05026823.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
gi|196180215|gb|EDX75207.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
Length = 353
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLF G GG+ L E E + TYQ N +A+ +
Sbjct: 27 VIDLFAGCGGLALGFEAA----GFRTIGY-EKLADACTTYQHNLHGFCYQTTLAR-QPDL 80
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
+ DV++ G PCQPFS G
Sbjct: 81 VDGADVIIGGPPCQPFSVGG 100
>gi|317506898|ref|ZP_07964670.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC
BAA-974]
gi|316254826|gb|EFV14124.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC
BAA-974]
Length = 331
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
L + ++ G GG LE + EI+ + T Q + GD+ ++
Sbjct: 7 LSVLEICAGAGGQSSGLEMA----GFGHALAVEIDKDAAATLQLNRPSWDVHEGDVREVN 62
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
++ D+L G PC PFS AG
Sbjct: 63 GREYKGVDLLAGGVPCPPFSIAG 85
>gi|332668060|ref|YP_004450848.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332336874|gb|AEE53975.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
Length = 395
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP---YSVKTYQANFPNTLIFGDIAKI 59
+ F GIG +RL LEQ E ++++I+P + + + N GDI ++
Sbjct: 12 TCAEFFAGIGLMRLGLEQA----GWEITYANDIDPIKDKIYQNHFQDPQNHFQLGDIHQL 67
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
++IP + A FPC S AG
Sbjct: 68 DVKEIPYVTLATASFPCTDLSLAG 91
>gi|269964614|ref|ZP_06178852.1| hypothetical protein VMC_02820 [Vibrio alginolyticus 40B]
gi|269830513|gb|EEZ84734.1| hypothetical protein VMC_02820 [Vibrio alginolyticus 40B]
Length = 556
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+LF G GG L LE+ +EC ++ +P + T + N PN + G+I+ +
Sbjct: 4 FTFVELFAGCGGTALGLEKA----GMECVLLNDSDPRACDTLRTNRPNWNLVEGNISNVD 59
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
I H D+L FP QPFS AG
Sbjct: 60 FSTISTHVDLLSGSFPVQPFSLAG 83
>gi|325979448|ref|YP_004289164.1| DNA (cytosine-5-)-methyltransferase [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|325179376|emb|CBZ49420.1| DNA (cytosine-5-)-methyltransferase [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
Length = 333
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57
+K +LF G GG+ L +E+ E E + + +T + N PN + +I+
Sbjct: 1 MKSIELFAGAGGLALGIEKA----GFETIGLIEFDSAAAETLKYNRPNWNVIHDDVANIS 56
Query: 58 KIKTQDI-----PDHDVLLAGFPCQPFSQAG 83
K+ +D + D+L G PCQ FS AG
Sbjct: 57 KLDLEDYFSIRKGELDLLSGGAPCQSFSYAG 87
>gi|256810753|ref|YP_003128122.1| DNA-cytosine methyltransferase [Methanocaldococcus fervens AG86]
gi|256793953|gb|ACV24622.1| DNA-cytosine methyltransferase [Methanocaldococcus fervens AG86]
Length = 310
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + DLF G GG + E VKTY N + DI +I
Sbjct: 1 MNVIDLFSGCGGFSKGF----LDEKFRILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPP 56
Query: 62 ------QDIPDHDVLLAGFPCQPFSQA 82
DV++ PC+PF++A
Sbjct: 57 KAFDEFIKNEKVDVIIGSPPCEPFTKA 83
>gi|225571372|ref|ZP_03780368.1| hypothetical protein CLOHYLEM_07470 [Clostridium hylemonae DSM
15053]
gi|225159848|gb|EEG72467.1| hypothetical protein CLOHYLEM_07470 [Clostridium hylemonae DSM
15053]
Length = 479
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---IFGDIAK 58
DLF G GG+ L + + EI+ + Y+AN+ + DI +
Sbjct: 4 YNAIDLFSGCGGMTSGLIKA----GFNVIAAVEIDKNAASAYRANYKSNKIKLFEKDIRQ 59
Query: 59 IKTQDIPD------HDVLLAGFPCQPFS 80
+ + DI + +L PCQ FS
Sbjct: 60 VSSMDIYELLEGDVLHLLAGCPPCQGFS 87
>gi|321476287|gb|EFX87248.1| hypothetical protein DAPPUDRAFT_187425 [Daphnia pulex]
Length = 341
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
++I +L+ GIGG+ E + E FS +IN + +I +
Sbjct: 6 MRILELYSGIGGMHYAAELA--NVGAEVVFSVDINTSANAVYRHNFKQTNQQARNIESLS 63
Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83
++I D+++ PCQPF++ G
Sbjct: 64 AKEINKLRPDIIMMSPPCQPFTRVG 88
>gi|229551649|ref|ZP_04440374.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus rhamnosus
LMS2-1]
gi|229314967|gb|EEN80940.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus rhamnosus
LMS2-1]
Length = 283
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ +LF GIGGI L + +E E Y Q ++P+ +F D+ K+
Sbjct: 1 MRSLELFAGIGGIALAEQMA----GIEVAGLCEYADYPRTILQKHWPDVPLFKDVTKLDR 56
Query: 62 QD-------IPDHDVLLAGFPCQPFSQAG 83
++ D++ GFPCQPFS AG
Sbjct: 57 EELTNAGISPDSIDIVSGGFPCQPFSIAG 85
>gi|260642764|ref|ZP_05417219.2| modification methylase NgoMIV [Bacteroides finegoldii DSM 17565]
gi|260620609|gb|EEX43480.1| modification methylase NgoMIV [Bacteroides finegoldii DSM 17565]
Length = 327
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 26/85 (30%), Gaps = 6/85 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M ++ G GG L LE E + + N IF
Sbjct: 1 MYNSIEICAGAGGQALGLEMA----GFSHVALVEYEKDYCECLKRNRQEWNIFCKDVHHF 56
Query: 61 T--QDIPDHDVLLAGFPCQPFSQAG 83
D+L G PC PFS AG
Sbjct: 57 DGKPYYGQIDLLAGGVPCPPFSVAG 81
>gi|317132208|ref|YP_004091522.1| DNA-cytosine methyltransferase [Ethanoligenens harbinense YUAN-3]
gi|315470187|gb|ADU26791.1| DNA-cytosine methyltransferase [Ethanoligenens harbinense YUAN-3]
Length = 346
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHR-NVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIA 57
+++ D F GIGG ++Q +++ EI+ + K Y + T D+
Sbjct: 4 VIRFFDCFAGIGGFYYGVQQIKSNKYEFRHVAYCEIDKSAQKFYDVACSSEGTQKIQDVK 63
Query: 58 KIKTQDIPD------HDVLLAGFPCQPFSQAG 83
IKT+ P+ D+L AGFPCQ FS G
Sbjct: 64 DIKTKKNPNGIMVSDFDILFAGFPCQSFSNVG 95
>gi|303236368|ref|ZP_07322958.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens
FB035-09AN]
gi|302483426|gb|EFL46431.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens
FB035-09AN]
Length = 357
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--------IF 53
I DLFCG GG+ E+ + +I ++ T++ N +
Sbjct: 7 YNIIDLFCGCGGLSKGFEEA----GYKTLLGVDIEQNALNTFEKNHNGAVGLNLDLSASE 62
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ DV++ G PCQ FS G
Sbjct: 63 SFDKIDEVVKGRAIDVIIGGPPCQGFSLTG 92
>gi|323650463|gb|ADX97312.1| M.FspI [Fischerella muscicola SAG 1427-1]
Length = 385
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 33/93 (35%), Gaps = 16/93 (17%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIKT 61
K+ DLF G GG+ E + +++ +I DI KI
Sbjct: 4 KVIDLFAGAGGLTTGFHMA----GFESLCAIDVDAKPLATYKHNYPNTKIIHQDIRKINP 59
Query: 62 QD--------IPDHDVLLAGFPCQPFSQ---AG 83
D + L+ G PCQ FS+ AG
Sbjct: 60 SDLRLALGLQREELTALIGGPPCQGFSRNIPAG 92
>gi|258511120|ref|YP_003184554.1| DNA-cytosine methyltransferase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257477846|gb|ACV58165.1| DNA-cytosine methyltransferase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 395
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--------FPNTLIF 53
++ +LF G GG+ + + E + Y+ T + N +
Sbjct: 1 MRSVELFVGAGGLAMGISNA----GFRHVGLYEWDRYACDTIRFNKERNVGPVRDWPIYQ 56
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ + ++L G PCQPFS G
Sbjct: 57 LDVRSVDFTQYRGIELLAGGPPCQPFSLGG 86
>gi|328710652|ref|XP_001949338.2| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like
[Acyrthosiphon pisum]
Length = 328
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
+++ + F GIGG+ L++ N N E + +IN + L +I +
Sbjct: 1 MRVIEFFSGIGGMHFALKE-CNLENFEVVLAVDINTVANAVYRHFFPSTNLRDLNILSLS 59
Query: 61 T--QDIPDHDVLLAGFPCQPFSQAG 83
D D+LL PCQPF++ G
Sbjct: 60 PEQFDAYHPDILLMSPPCQPFTRNG 84
>gi|323143137|ref|ZP_08077837.1| DNA (cytosine-5-)-methyltransferase [Succinatimonas hippei YIT
12066]
gi|322417087|gb|EFY07721.1| DNA (cytosine-5-)-methyltransferase [Succinatimonas hippei YIT
12066]
Length = 541
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF G GG+ L QT E + E +P TY+ N PN + GD+
Sbjct: 3 YSVVDLFAGAGGLSLGFVQTGK---YEMKVAFERDPNMQATYRLNHPNVELQGDVCGADY 59
Query: 62 QD----IPDHDVLLAGFPCQPFSQA 82
D DV++ G PCQ FS A
Sbjct: 60 ADIQKRYGAIDVVIGGPPCQGFSNA 84
>gi|168697993|ref|ZP_02730270.1| DNA methyltransferase [Gemmata obscuriglobus UQM 2246]
Length = 489
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ + GI ++ + F SEI+ + ++P+T GD I
Sbjct: 1 MRYGSVCSGI----EAATAAWHPLGWQPIFFSEIDNFPRAVLAHHYPHTPCHGDFTTIGK 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+L+ G PCQ FS AG
Sbjct: 57 DTYDPIDLLVGGTPCQSFSVAG 78
>gi|317500279|ref|ZP_07958506.1| cytosine-specific methyltransferase [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087487|ref|ZP_08336423.1| hypothetical protein HMPREF1025_00006 [Lachnospiraceae bacterium
3_1_46FAA]
gi|316898322|gb|EFV20366.1| cytosine-specific methyltransferase [Lachnospiraceae bacterium
8_1_57FAA]
gi|330410467|gb|EGG89898.1| hypothetical protein HMPREF1025_00006 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 410
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+LF G GG+ L +E+ E E + + +I+
Sbjct: 77 FTTIELFAGAGGLALGIEKA----GFEPLGLIEFDKDAAESLKTNRPNWRVIHDDIANIS 132
Query: 58 KIKTQDI-----PDHDVLLAGFPCQPFSQAG 83
+ +D + D+L G PCQ FS AG
Sbjct: 133 CLDLEDYFGIKKGELDLLSGGAPCQAFSYAG 163
>gi|86750436|ref|YP_486932.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2]
gi|86573464|gb|ABD08021.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2]
Length = 438
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------TLIFGD 55
+ DLFCG GG+ S+ +P ++ TY+ANFP +
Sbjct: 6 FSVVDLFCGAGGLSQGFRDA----GFRVVAGSDNDPDAMATYRANFPEAAGITGDIRSAP 61
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQ 81
I + + VL+ G PCQ FSQ
Sbjct: 62 IKEQLLEAARRATVLIGGPPCQAFSQ 87
>gi|42783651|ref|NP_980898.1| DNA-cytosine methyltransferase family protein [Bacillus cereus
ATCC 10987]
gi|42739580|gb|AAS43506.1| DNA-cytosine methyltransferase family protein [Bacillus cereus
ATCC 10987]
Length = 362
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ F G GG+ + + + + S E+ P +T + N PN + T
Sbjct: 1 MNCISFFAGAGGLDMGIHKA----GFDVRVSVELEPVYCETLRTNHPNWNVVEGDIMTYT 56
Query: 62 QDI---------PDHDVLLAGFPCQPFSQAG 83
+ + D+++ G PCQ FS AG
Sbjct: 57 PEQVLEQADLQEGEVDLMIGGSPCQSFSTAG 87
>gi|166368724|ref|YP_001660997.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
gi|166091097|dbj|BAG05805.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 189
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+ DLF G GG+ L ++ + + ++ Y+ NF + + D+++
Sbjct: 1 MIT-IDLFAGCGGLSLGFQKA----GFTIVAAFDNWIPAIDVYRNNFSHPIFNVDLSRES 55
Query: 61 TQD---IPDHDVLLAGFPCQPFSQAG 83
+Q+ + ++++ PCQ FS AG
Sbjct: 56 SQEIFAQYNPEIIVGSPPCQDFSSAG 81
>gi|86140476|ref|ZP_01059035.1| modification methylase BepI-like [Leeuwenhoekiella blandensis
MED217]
gi|85832418|gb|EAQ50867.1| modification methylase BepI-like [Leeuwenhoekiella blandensis
MED217]
Length = 264
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 35/122 (28%), Gaps = 40/122 (32%)
Query: 2 LKITDLFCGIGGIRLDLEQTF---------------------------NHRNVECFFSSE 34
L + LF G GG+ L E F + F+++
Sbjct: 38 LNMLSLFSGCGGMDLGFEGQFSVLKSSVNEILSPNFIEKELENNFVELKKTRFKTVFAND 97
Query: 35 INPYSVKTYQANFPNTLIF------GDIAKIKTQDI-------PDHDVLLAGFPCQPFSQ 81
I + + F I + D D++ GFPCQ FS
Sbjct: 98 ILKDARNAWVHYFAKRGHNAEDFQTDSIVDLVKLHQSGTNVFPKDIDIVTGGFPCQDFSV 157
Query: 82 AG 83
AG
Sbjct: 158 AG 159
>gi|303285300|ref|XP_003061940.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456351|gb|EEH53652.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 341
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
++LF G+GG + L F+SE+ P++ +TY AN +
Sbjct: 1 FTFSELFAGVGGFGIAL----RSLGGSVVFASEMCPHARRTYAANNVVEIGDAPPALIVG 56
Query: 56 -IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + IP HD+L GFPCQ FSQ G
Sbjct: 57 DITDVCEDIIPPHDILTGGFPCQSFSQRG 85
>gi|145593130|ref|YP_001157427.1| DNA-cytosine methyltransferase [Salinispora tropica CNB-440]
gi|145302467|gb|ABP53049.1| DNA-cytosine methyltransferase [Salinispora tropica CNB-440]
Length = 652
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------DIAKI 59
DLF G GG+ L L + +++ +P SV+T++ ++P + +I +I
Sbjct: 55 DLFSGAGGLSLGLTEA----GFRVVLAADRDPESVETHRHHYPGLTLDYDLGESANIRRI 110
Query: 60 KT-QDIPDHDVLLAGFPCQPFSQAG 83
++L G PCQPFS+AG
Sbjct: 111 AALVKEAGIELLTGGPPCQPFSRAG 135
>gi|301311774|ref|ZP_07217699.1| modification methylase BepI [Bacteroides sp. 20_3]
gi|300830334|gb|EFK60979.1| modification methylase BepI [Bacteroides sp. 20_3]
Length = 425
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 36/120 (30%), Gaps = 38/120 (31%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN-------------------------HRNVECFFSSEIN 36
L++ LF G GG+ L E F F+++I
Sbjct: 14 LRVLSLFSGCGGMDLGFEGDFICHRKSISPQNTWVQEVIDEHWVRLQKNRFRTVFANDIL 73
Query: 37 PYSVKTYQANFPNTLIFGDIAKIKTQ-------------DIPDHDVLLAGFPCQPFSQAG 83
+ + ++ K+ + DV+ GFPCQ FS +G
Sbjct: 74 KEAQTAWLQYMDRFGYDKNVYNTKSIVDLVKEHRAGKKVFPKNIDVVTGGFPCQDFSVSG 133
>gi|255013132|ref|ZP_05285258.1| site-specific DNA methylase [Bacteroides sp. 2_1_7]
Length = 423
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 36/120 (30%), Gaps = 38/120 (31%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN-------------------------HRNVECFFSSEIN 36
L++ LF G GG+ L E F F+++I
Sbjct: 12 LRVLSLFSGCGGMDLGFEGDFICHRKSISPQSTWVQEVIDEHWVRLQKNRFRTVFANDIL 71
Query: 37 PYSVKTYQANFPNTLIFGDIAKIKTQ-------------DIPDHDVLLAGFPCQPFSQAG 83
+ + ++ K+ + DV+ GFPCQ FS +G
Sbjct: 72 KEAQTAWLQYMDRFGYDKNVYNTKSIVDLVKEHRAGKKVFPKNIDVVTGGFPCQDFSVSG 131
>gi|150009588|ref|YP_001304331.1| site-specific DNA methylase [Parabacteroides distasonis ATCC 8503]
gi|256838307|ref|ZP_05543817.1| site-specific DNA methylase [Parabacteroides sp. D13]
gi|149938012|gb|ABR44709.1| site-specific DNA methylase [Parabacteroides distasonis ATCC 8503]
gi|256739226|gb|EEU52550.1| site-specific DNA methylase [Parabacteroides sp. D13]
Length = 425
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 36/120 (30%), Gaps = 38/120 (31%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN-------------------------HRNVECFFSSEIN 36
L++ LF G GG+ L E F F+++I
Sbjct: 14 LRVLSLFSGCGGMDLGFEGDFICHRKSISPQSTWVQEVIDEHWVRLQKNRFRTVFANDIL 73
Query: 37 PYSVKTYQANFPNTLIFGDIAKIKTQ-------------DIPDHDVLLAGFPCQPFSQAG 83
+ + ++ K+ + DV+ GFPCQ FS +G
Sbjct: 74 KEAQTAWLQYMDRFGYDKNVYNTKSIVDLVKEHRAGKKVFPKNIDVVTGGFPCQDFSVSG 133
>gi|29566860|ref|NP_818425.1| gp127 [Mycobacterium phage Omega]
gi|29425585|gb|AAN12767.1| gp127 [Mycobacterium phage Omega]
Length = 247
Score = 68.8 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L DLF GIGG L L++ + + EI+ + ++P+ + F DI +
Sbjct: 3 LTHVDLFAGIGGFSLTLQRA----GAKTVANVEIDKNCRQILARHYPDAVQFDDIKNVSG 58
Query: 62 QD------IPDHDVLLAGFPCQPFS 80
D +P+ +L GFPCQ S
Sbjct: 59 DDLRSVGFVPERGILTGGFPCQDIS 83
>gi|119026251|ref|YP_910096.1| modification methylase Sau3AI [Bifidobacterium adolescentis ATCC
15703]
gi|118765835|dbj|BAF40014.1| modification methylase Sau3AI [Bifidobacterium adolescentis ATCC
15703]
Length = 424
Score = 68.8 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 24/105 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHR----------NVECFFSSEINPYSVKTYQANFPNT- 50
+K+ +LF G+GG RL L+ N + N +++ P T Q +
Sbjct: 5 IKVVELFAGVGGFRLGLDGYSNPKYPDFEMKPAGNFHTVWANNWEPDGRPTKQFAWRCYE 64
Query: 51 -------LIFGDIAKIKTQ------DIPDHDVLLAGFPCQPFSQA 82
+ DIA + Q ++P+ D+L+ GFPCQ +S A
Sbjct: 65 KRFGEGSCVNEDIAVVVEQIKNGERELPEFDMLVGGFPCQDYSVA 109
>gi|299145238|ref|ZP_07038306.1| putative cytosine-specific methyltransferase protein [Bacteroides
sp. 3_1_23]
gi|298515729|gb|EFI39610.1| putative cytosine-specific methyltransferase protein [Bacteroides
sp. 3_1_23]
Length = 402
Score = 68.8 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 32/99 (32%), Gaps = 22/99 (22%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----------VKTYQANFPNTL 51
D+F G GG+ L L + F+ E N + V +
Sbjct: 5 TYIDIFAGCGGLSLGLHNA----GWQGLFAVEKNADAFKTLEYNLIKKVNHFLWPDWFPK 60
Query: 52 IFGDIAKIKTQD-------IPDHDVLLAGFPCQPFSQAG 83
DI + D+++ G PCQ FS AG
Sbjct: 61 TSHDINVVLKDYKEQLLGLQQKVDLVVGGPPCQGFSMAG 99
>gi|213692399|ref|YP_002322985.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213523860|gb|ACJ52607.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320458540|dbj|BAJ69161.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 401
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-K 60
++ LF GI + + +EI P+ + ++P GD+ K+
Sbjct: 4 IRYISLFSGI----EAATVAWRQLGWKPIAYAEIEPFPKAVLRQHYPEVPDLGDMTKVDW 59
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
Q DV++ G PCQ FS AG
Sbjct: 60 KQYHHAADVVVGGSPCQAFSIAG 82
>gi|298735876|ref|YP_003728401.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|298355065|emb|CBI65937.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 312
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+P
Sbjct: 2 DFCSGIGGGRLGLEQ----CHLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLP 57
Query: 66 DHDVLLAGFPCQPFSQAG 83
D D+L++GFPCQ FS G
Sbjct: 58 DFDMLVSGFPCQAFSING 75
>gi|238025826|ref|YP_002910057.1| DNA cytosine methyltransferase M.NgoMIII [Burkholderia glumae
BGR1]
gi|237875020|gb|ACR27353.1| DNA cytosine methyltransferase M.NgoMIII [Burkholderia glumae
BGR1]
Length = 407
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 14/92 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K +L+ G GG+ + + + E + ++ T + N +
Sbjct: 1 MKAVELYAGAGGLAMGVGLA----GFKPLAVVEWDRWACDTIRENQRRGFPLVADWPLYE 56
Query: 62 QDIPDHD----------VLLAGFPCQPFSQAG 83
D+ D +L G PCQPFS G
Sbjct: 57 GDVRKFDWSRLEGEEIDLLAGGPPCQPFSMGG 88
>gi|127429|sp|P06530|MTBR_BACSU RecName: Full=Modification methylase BsuRI; Short=M.BsuRI; AltName:
Full=Cytosine-specific methyltransferase BsuRI
gi|40247|emb|CAA26731.1| unnamed protein product [Bacillus subtilis]
Length = 436
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINP 37
+ + LF G GG+ L E N +++++
Sbjct: 59 INVLSLFSGCGGLDLGFELAGLAAVIGEQAAMEAFKDKDRFNELRNKSIFHTIYTNDLFK 118
Query: 38 YSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +TY+ NFP +I + + + P +++L GFPC FS+AG
Sbjct: 119 EANQTYKTNFPGHVIQHEKDIRQVKYFPKCNLILGGFPCPGFSEAG 164
>gi|78000013|ref|YP_358798.1| putative methylase [Lactobacillus phage Lc-Nu]
gi|37826042|gb|AAR04663.1| putative methylase [Lactobacillus phage Lc-Nu]
Length = 261
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ +LF GIGGI L + +E E Y Q ++P+ +F D+ K+
Sbjct: 1 MRSLELFAGIGGIALAEQMA----GIEVAGLCEYADYPRAILQKHWPDVPLFKDVTKLDR 56
Query: 62 QD-------IPDHDVLLAGFPCQPFSQAG 83
++ D++ GFPCQPFS AG
Sbjct: 57 EELTNAGISPDSIDIVSGGFPCQPFSIAG 85
>gi|77409601|ref|ZP_00786278.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae
COH1]
gi|77171795|gb|EAO74987.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae
COH1]
Length = 333
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
+K +LF G GG+ L +E+ + E + + +T + N PN + D
Sbjct: 1 MKSIELFAGAGGLALGIEKA----GFDTIGLVEFDSAASETLKYNRPNWNVIHDDVANIS 56
Query: 56 ---IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + + D+L G PCQ FS AG
Sbjct: 57 KLDLEEYFLIKKGELDLLSGGAPCQSFSYAG 87
>gi|167043721|gb|ABZ08413.1| putative C-5 cytosine-specific DNA methylase [uncultured marine
crenarchaeote HF4000_APKG3B16]
Length = 377
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 10/87 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61
+ L+ G GG L + E + ++ N + T + NF D +
Sbjct: 5 TLISLYSGCGGSALGFQNA----GFEITYMNDNNADACYTLKENFEKPSANPDRQVVHRG 60
Query: 62 -----QDIPDHDVLLAGFPCQPFSQAG 83
D++ GFPCQ FS AG
Sbjct: 61 NVKDVFQFGSADIIEGGFPCQGFSLAG 87
>gi|241204300|ref|YP_002975396.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858190|gb|ACS55857.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 662
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
L + +L G GG+ L LE E + ++ T ++ GDI ++
Sbjct: 296 LNVIELCAGAGGMSLGLEDA----GFHPLALFEFDKHAAATLRLNRPLWNVVEGDIRQVD 351
Query: 61 --TQDIPDHDVLLAGFPCQPFSQAG 83
D+L+ G PCQPFS G
Sbjct: 352 FTPYRSAGVDLLVGGLPCQPFSIDG 376
>gi|298373979|ref|ZP_06983937.1| modification methylase BepI [Bacteroides sp. 3_1_19]
gi|298268347|gb|EFI10002.1| modification methylase BepI [Bacteroides sp. 3_1_19]
Length = 425
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 36/120 (30%), Gaps = 38/120 (31%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN-------------------------HRNVECFFSSEIN 36
L++ LF G GG+ L E F F+++I
Sbjct: 14 LRVLSLFSGCGGMDLGFEGDFICHRKSISPQSSWIQEVIDEHWVRLQRNRFRTVFANDIL 73
Query: 37 PYSVKTYQANFPNTLIFGDIAKIKTQ-------------DIPDHDVLLAGFPCQPFSQAG 83
+ + ++ K+ + DV+ GFPCQ FS +G
Sbjct: 74 KEAQTAWLQYMDRFGYDKNVYNTKSIVDLVKEHRAGKKVFPKNIDVVTGGFPCQDFSVSG 133
>gi|262383127|ref|ZP_06076264.1| site-specific DNA methylase [Bacteroides sp. 2_1_33B]
gi|262296005|gb|EEY83936.1| site-specific DNA methylase [Bacteroides sp. 2_1_33B]
Length = 423
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 36/120 (30%), Gaps = 38/120 (31%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN-------------------------HRNVECFFSSEIN 36
L++ LF G GG+ L E F F+++I
Sbjct: 12 LRVLSLFSGCGGMDLGFEGDFICHRKSISPQSSWVQEVINEHWVRLQRNRFRTVFANDIL 71
Query: 37 PYSVKTYQANFPNTLIFGDIAKIKTQ-------------DIPDHDVLLAGFPCQPFSQAG 83
+ + ++ K+ + DV+ GFPCQ FS +G
Sbjct: 72 KEAQTAWLQYMDRFGYDKNVYNTKSIVDLVKEHRAGKKVFPKNIDVVTGGFPCQDFSVSG 131
>gi|241667884|ref|ZP_04755462.1| C-5 cytosine-specific DNA methylase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 457
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 35/113 (30%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLI 52
+K DLF G GG+ L + F+ E +P + +T+ NF + +
Sbjct: 1 MKYIDLFAGCGGLSLGF----KSEGFDLLFAVEKSPMAAETFYHNFIEKINDNIEWSKYL 56
Query: 53 FGDIAKIKT----------------------QDIPDHDVLLAGFPCQPFSQAG 83
I + I + D+++ G PCQ FS AG
Sbjct: 57 NKSIEEQLDSKLFVGETLTLLEKPQLLKKLKTKIGELDLIVGGPPCQGFSLAG 109
>gi|239624756|ref|ZP_04667787.1| DNA-cytosine methyltransferase [Clostridiales bacterium
1_7_47_FAA]
gi|239521142|gb|EEQ61008.1| DNA-cytosine methyltransferase [Clostridiales bacterium
1_7_47FAA]
Length = 420
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------GD 55
+ +LF G+GG RL L+ + E + S+ P K + + D
Sbjct: 4 TVCELFAGVGGFRLGLQHS--SPQWETVWFSQWEPGRKKQWAHDCYVKHWGDIDERTGQD 61
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
IA + IPDH +L+ GFPCQ +S A
Sbjct: 62 IASVDKTAIPDHTLLVGGFPCQNYSVA 88
>gi|300775991|ref|ZP_07085850.1| possible DNA (cytosine-5-)-methyltransferase [Chryseobacterium
gleum ATCC 35910]
gi|300505124|gb|EFK36263.1| possible DNA (cytosine-5-)-methyltransferase [Chryseobacterium
gleum ATCC 35910]
Length = 415
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 35/98 (35%), Gaps = 22/98 (22%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
DLF G GG+ L L F+ E NP + KT + N N D + +
Sbjct: 7 YIDLFAGCGGLSLGLHNA----GWNGLFAIEKNPDAFKTLEHNLINKKKHFDWPEWLPKK 62
Query: 64 IPDHD------------------VLLAGFPCQPFSQAG 83
D + ++ G PCQ FS AG
Sbjct: 63 NHDINSVLRTYKKNLKSLRGSVSLVAGGPPCQGFSMAG 100
>gi|238917713|ref|YP_002931230.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC
27750]
gi|238873073|gb|ACR72783.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC
27750]
Length = 477
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 15/91 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK+ DLFCG GG+ L Q +++I A+ I
Sbjct: 102 LKMLDLFCGAGGLSLGFTQ----EGFVTSLANDI-QDCCVDTYAHNHPETPRDHIVLGDI 156
Query: 62 QDI----------PDHDVLLAGFPCQPFSQA 82
+D+ + D+++ G PCQ FS A
Sbjct: 157 KDVVKNLDELLAGRNVDIVVGGPPCQGFSMA 187
>gi|323694940|ref|ZP_08109090.1| type II DNA modification methyltransferase [Clostridium symbiosum
WAL-14673]
gi|323501030|gb|EGB16942.1| type II DNA modification methyltransferase [Clostridium symbiosum
WAL-14673]
Length = 338
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L LF GIGG+ L E E E Y + ++P+ F DI
Sbjct: 4 LTHVSLFSGIGGLDLAAEAA----GFETVCQCEWADYPYSVLERHWPDVPKFRDITTFTK 59
Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83
+ ++ GFPCQPFS AG
Sbjct: 60 EAFFEKTGLETVTIISGGFPCQPFSTAG 87
>gi|326560963|gb|EGE11328.1| type II DNA modification enzyme [Moraxella catarrhalis 7169]
gi|326575187|gb|EGE25115.1| type II DNA modification enzyme [Moraxella catarrhalis CO72]
Length = 322
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
D GIG RL LE + C SEI+ S TYQ F + GD+ ++ + D+P
Sbjct: 2 DFCSGIGAGRLGLENA----GMCCVAHSEIDLNSDLTYQLFFNDYSNLGDLTQLNSDDLP 57
Query: 66 DHDVLLAGFPCQPFSQAG 83
D DV+LAGFPCQ FS G
Sbjct: 58 DFDVMLAGFPCQTFSIVG 75
>gi|54020626|ref|YP_116141.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae
232]
gi|53987799|gb|AAV28000.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232]
Length = 416
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 32/95 (33%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
DLF G GG+ L S EI + +TY NF ++
Sbjct: 92 YNFIDLFSGAGGLSCGLVMA----GFLPLASLEIMKQAFETYAYNFKKRSKNKELFKLGD 147
Query: 57 --------AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D++ GFPCQ FS AG
Sbjct: 148 IRDSKIKSEFYDHFKDQELDLIAGGFPCQGFSMAG 182
>gi|323693680|ref|ZP_08107879.1| type II DNA modification methyltransferase [Clostridium symbiosum
WAL-14673]
gi|323502294|gb|EGB18157.1| type II DNA modification methyltransferase [Clostridium symbiosum
WAL-14673]
Length = 303
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L LF GIGGI L E E + ++ + ++P F DI +
Sbjct: 4 LTHFSLFSGIGGIDLAAEAA----GFTTVCQCEWADFPMEVLKKHWPQVPKFKDITTVTK 59
Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83
+ ++ GFPCQPFS AG
Sbjct: 60 EAFFEKTGRETTTLISGGFPCQPFSSAG 87
>gi|269121452|ref|YP_003309629.1| DNA-cytosine methyltransferase [Sebaldella termitidis ATCC 33386]
gi|268615330|gb|ACZ09698.1| DNA-cytosine methyltransferase [Sebaldella termitidis ATCC 33386]
Length = 372
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ +LF GIG R LE+ H + SEI+ +++ +Y+A + L K
Sbjct: 1 MKVIELFAGIGSPRKALEKLNIH--HKVIAFSEIDRFAIDSYRAIHNDFLTPNLGDIEKI 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+++P+ D+L+ G PCQ S AG
Sbjct: 59 KELPETDLLIYGSPCQDISIAG 80
>gi|332530473|ref|ZP_08406414.1| DNA cytosine methyltransferase M.NgoMIII [Hylemonella gracilis
ATCC 19624]
gi|332040042|gb|EGI76427.1| DNA cytosine methyltransferase M.NgoMIII [Hylemonella gracilis
ATCC 19624]
Length = 413
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 30/95 (31%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L +LF G GG+ + + E + ++ T + N +
Sbjct: 3 LTSIELFAGAGGLAMGVALA----GFRSHAVVEWDKWACDTVRQNQERGHPLVRDWPVVE 58
Query: 62 QD-------------IPDHDVLLAGFPCQPFSQAG 83
D D+L G PCQPFS G
Sbjct: 59 GDVRNWARDFDASGLEGKLDLLAGGPPCQPFSMGG 93
>gi|110800293|ref|YP_695463.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC
13124]
gi|110674940|gb|ABG83927.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC
13124]
Length = 407
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 12/90 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------FGDI 56
+ +LF G+GG L L + + E ++++ P + DI
Sbjct: 6 TVCELFAGVGGFHLGLSKA--SADWEVLWANQWEPSRKVQHAFECYAKHFPKTNAVNEDI 63
Query: 57 AKIKTQDI----PDHDVLLAGFPCQPFSQA 82
A + P +++L+ GFPCQ +S A
Sbjct: 64 ALVNENPEAFGLPKYNLLVGGFPCQDYSVA 93
>gi|75812889|ref|YP_320506.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
gi|75705645|gb|ABA25317.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
Length = 415
Score = 68.0 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 33/92 (35%), Gaps = 17/92 (18%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---------- 54
LF G+GG L E E + + NP + TYQ NFP+ +
Sbjct: 12 ISLFSGVGGFDLGFEAA----GFEIAIAIDNNPIVLATYQHNFPHATVLCKDIREVTAQE 67
Query: 55 ---DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + G PCQ FS AG
Sbjct: 68 IRACIQAKYVDWDGEIHTVFGGPPCQGFSVAG 99
>gi|15645735|ref|NP_207912.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori 26695]
gi|2314272|gb|AAD08164.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori 26695]
Length = 312
Score = 68.0 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+P
Sbjct: 2 DFCSGIGGGRLGLEQ----CHLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLP 57
Query: 66 DHDVLLAGFPCQPFSQAG 83
D D L++GFPCQ FS G
Sbjct: 58 DFDALISGFPCQAFSING 75
>gi|224541047|ref|ZP_03681586.1| hypothetical protein CATMIT_00198 [Catenibacterium mitsuokai DSM
15897]
gi|224526044|gb|EEF95149.1| hypothetical protein CATMIT_00198 [Catenibacterium mitsuokai DSM
15897]
Length = 418
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 21/102 (20%)
Query: 2 LKITDLFCGIGGIRLDL---------EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI 52
L + +LF G+GG R+ L ++ +RN + ++++ P + N T
Sbjct: 3 LTVVELFAGVGGFRVGLNDIKSFDENDKAIENRNWKFVWANQFEPSTKTQPAYNCYCTRF 62
Query: 53 FGDIA------------KIKTQDIPDHDVLLAGFPCQPFSQA 82
+ T IP+H +L+ GFPCQ +S A
Sbjct: 63 GEEHTSNTDIQEEVAHLDEDTDYIPNHSLLVGGFPCQDYSVA 104
>gi|52788777|gb|AAU87368.1| MnlI m5C-methyltransferase [Moraxella nonliquefaciens]
Length = 351
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
+ I DLFCG GG+ EQ + N ++ TYQ N N+ I
Sbjct: 1 MNILDLFCGAGGLSYGFEQA----GFNAVLGVDFNEKALDTYQKNHKNSQILCGDLTSCE 56
Query: 55 -DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+K + +L G PCQ FS G
Sbjct: 57 LKDEIVKIAKTNNVRAVLGGPPCQGFSLKG 86
>gi|1781029|emb|CAA67412.1| orf1 [Methanopyrus kandleri]
Length = 146
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIKT 61
K+ DLFCG GG ++ + E NP + + +I DI ++ +
Sbjct: 4 KVVDLFCGAGGFSRGFKEA----GFKILGGVENNPAPAATYRENFPEAEVIERDIQRVDS 59
Query: 62 QDI----PDHDVLLAGFPCQPFSQA 82
++I + DV++ G PC+PF+ A
Sbjct: 60 EEIVDELGEPDVIIGGPPCEPFTAA 84
>gi|23428398|gb|AAL15430.1| DNA methyltransferase A [Moraxella nonliquefaciens]
Length = 351
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
+ I DLFCG GG+ EQ + N ++ TYQ N N+ I
Sbjct: 1 MNILDLFCGAGGLSYGFEQA----GFNAVLGVDFNEKALDTYQKNHKNSQILCGDLTSCE 56
Query: 55 -DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+K + +L G PCQ FS G
Sbjct: 57 LKDEIVKIAKTNNVRAVLGGPPCQGFSLKG 86
>gi|148252729|ref|YP_001237314.1| putative 5-methylcytosine methyltransferase [Bradyrhizobium sp.
BTAi1]
gi|146404902|gb|ABQ33408.1| putative 5-methylcytosine methyltransferase [Bradyrhizobium sp.
BTAi1]
Length = 381
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 30/89 (33%), Gaps = 18/89 (20%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--------------QANFPNTL 51
DLF G GG L + + E + Y+ +TY + L
Sbjct: 26 DLFAGAGGFSLGAHLA----GINVAAAIEWDKYACQTYRANLIDTGLASTHLFEEDISKL 81
Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
+ + D+LL G PCQ FS
Sbjct: 82 APNRVKLVAGFHERPCDILLGGPPCQGFS 110
>gi|41019146|sp|P09389|MTBB_BPSPB RecName: Full=Modification methylase SPBetaI; Short=M.SPBetaI;
AltName: Full=Cytosine-specific methyltransferase
SPBetaI
Length = 257
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
L++ LF GIG L E SEI+ Y++K+Y N TL GDI+K
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVD--YELIGFSEIDKYAIKSYCAIHNVSETLNVGDISKA 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K +IP D+L +GFPC FS AG
Sbjct: 62 KKDNIPYFDLLTSGFPCPTFSVAG 85
>gi|157952312|ref|YP_001497204.1| hypothetical protein NY2A_B008R [Paramecium bursaria Chlorella
virus NY2A]
gi|155122539|gb|ABT14407.1| hypothetical protein NY2A_B008R [Paramecium bursaria Chlorella
virus NY2A]
Length = 331
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L+ LF G GG ++ V+ SE++ ++KT+ +N P+ + GD++ I
Sbjct: 4 LRAISLFAGAGGDTFGMKLA----GVDVVAFSELDADAMKTHNSNNPDCVALGDVSLIDE 59
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D++ AGFPCQ FS AG
Sbjct: 60 AMLSQFVNIDIIFAGFPCQGFSNAG 84
>gi|208289|gb|AAA72678.1| Mtase protein (ttg start codon) [synthetic construct]
Length = 474
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
L++ LF GIG L E SEI+ Y++K+Y N TL GDI+K
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVD--YELIGFSEIDKYAIKSYCAIHNVSETLNVGDISKA 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K +IP D+L +GFPC FS AG
Sbjct: 62 KKDNIPYFDLLTSGFPCPTFSVAG 85
>gi|9630267|ref|NP_046694.1| modification methylase [Bacillus phage SPBc2]
gi|16079084|ref|NP_389907.1| SP-beta prophage DNA (cytosine-5-)-methyltransferase [Bacillus
subtilis subsp. subtilis str. 168]
gi|221309931|ref|ZP_03591778.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis
str. 168]
gi|221314254|ref|ZP_03596059.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221319176|ref|ZP_03600470.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221323451|ref|ZP_03604745.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis
str. SMY]
gi|56405062|sp|P68585|MTBP_BACSU RecName: Full=Phi-3T prophage-derived modification methylase
Phi3TI; Short=M.Phi3TI; AltName: Full=Cytosine-specific
methyltransferase Phi3TI
gi|56405063|sp|P68586|MTBP_BPPHT RecName: Full=Modification methylase Phi3TI; Short=M.Phi3TI;
AltName: Full=Cytosine-specific methyltransferase
Phi3TI
gi|7433506|pir||T12906 modification methylase - Bacillus subtilis phage SPBc2
gi|215471|gb|AAA32352.1| methyltransferase (ttg start codon) [Bacillus phage phi3T]
gi|2634418|emb|CAB13917.1| putative SP-beta prophage DNA (cytosine-5-)-methyltransferase
[Bacillus subtilis subsp. subtilis str. 168]
gi|3025620|gb|AAC13115.1| modification methylase [Bacillus phage SPbeta]
Length = 443
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
L++ LF GIG L E SEI+ Y++K+Y N TL GDI+K
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVD--YELIGFSEIDKYAIKSYCAIHNVSETLNVGDISKA 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K +IP D+L +GFPC FS AG
Sbjct: 62 KKDNIPYFDLLTSGFPCPTFSVAG 85
>gi|261420917|ref|YP_003254598.1| DNA-cytosine methyltransferase [Geobacillus sp. Y412MC61]
gi|319768595|ref|YP_004134095.1| DNA-cytosine methyltransferase [Geobacillus sp. Y412MC52]
gi|261377375|gb|ACX80116.1| DNA-cytosine methyltransferase [Geobacillus sp. Y412MC61]
gi|317113461|gb|ADU95952.1| DNA-cytosine methyltransferase [Geobacillus sp. Y412MC52]
Length = 370
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 11/94 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQT------FNHRNVECFFSSEINPYSVKTYQANFPNTLIF- 53
+ + +LF G GG+ L + +E ++++ N + +TY+ N
Sbjct: 2 IFRKGELFSGPGGLALGAKMARVVDADGEEFRIEHVWANDYNESACRTYRRNICGDPDDP 61
Query: 54 ----GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ ++ + +P D L GFPC +S G
Sbjct: 62 SVIACDVRELDIEQLPRIDALSFGFPCNDYSVVG 95
>gi|218895987|ref|YP_002444398.1| modification methylase DdeI [Bacillus cereus G9842]
gi|218542827|gb|ACK95221.1| modification methylase DdeI [Bacillus cereus G9842]
Length = 468
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN----PYSVKTYQANFPNTLIFGDIA-K 58
DLFCG GG+ + LEQ N E F+ + + + ++ GDI
Sbjct: 92 FIDLFCGAGGLSVGLEQ----YNFEPIFALDFDLSASKSYLFNRPFLSESSFYNGDIKEF 147
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQA 82
+ D+P V++ G PCQ FS A
Sbjct: 148 LLHNDLPKAPVIVGGPPCQGFSNA 171
>gi|283956744|ref|ZP_06374220.1| hypothetical protein C1336_000290019 [Campylobacter jejuni subsp.
jejuni 1336]
gi|283791719|gb|EFC30512.1| hypothetical protein C1336_000290019 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 330
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 10/89 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIK 60
DLF G GG L ++ S + NP S+ + I DI
Sbjct: 4 YNTLDLFSGAGGFSLGFLKSGA---FNILLSIDNNPKLSISYEKNFDFIKHINRDILSFS 60
Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83
+DI + +V++ G PCQ FS AG
Sbjct: 61 DKDIQKLQQKYNFEVIIGGPPCQGFSLAG 89
>gi|228471867|ref|ZP_04056638.1| cytosine-specific methyltransferase NlaX [Capnocytophaga gingivalis
ATCC 33624]
gi|228276797|gb|EEK15500.1| cytosine-specific methyltransferase NlaX [Capnocytophaga gingivalis
ATCC 33624]
Length = 186
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYS-----VKTYQANFPNTLIF 53
L+I + F G GG L + E SEI+ ++ V +
Sbjct: 11 LRIFEGFAGYGGASFALRKLKEKYPQFKYEVVGYSEIDKFASSLFDVNHKGKQGNPIKNW 70
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
GDI I ++PD D+ GFPCQPFS AG
Sbjct: 71 GDITLIDPYELPDFDMFTGGFPCQPFSSAG 100
>gi|218441855|ref|YP_002380184.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
gi|218174583|gb|ACK73316.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
Length = 342
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLF G GG+ L E + ++N + ++Y N + +I
Sbjct: 33 VVDLFAGCGGLSLGFE----AQGFLTIGF-DMNHDACQSYCHNLEGNCL--EIILTPETL 85
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
+PD V++ PCQPFS +G
Sbjct: 86 LPDCRVIIGSPPCQPFSVSG 105
>gi|108563484|ref|YP_627800.1| type II DNA modification enzyme [Helicobacter pylori HPAG1]
gi|107837257|gb|ABF85126.1| type II DNA modification enzyme [Helicobacter pylori HPAG1]
Length = 313
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
D GIGG RL LE +++C +EIN +++TY+ F +T FGD+ +I D+P
Sbjct: 2 DFCSGIGGGRLGLE----RCHLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLP 57
Query: 66 DHDVLLAGFPCQPFSQAG 83
D D L++GFPCQ FS G
Sbjct: 58 DFDALISGFPCQAFSING 75
>gi|241666957|ref|YP_002985041.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240862414|gb|ACS60079.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 393
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 14/92 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLI 52
++ +LF G GG+ + + + E + + T + N I
Sbjct: 1 MRAIELFAGAGGLGMGVSRA----GFTPQAVVEWDRWCCDTIRENREKGIASLAGWPMPI 56
Query: 53 FGDIAKIKTQDI-PDHDVLLAGFPCQPFSQAG 83
GD+ + + D++ G PCQPFS G
Sbjct: 57 EGDVRGVNFRGFEGKLDLVTGGPPCQPFSLGG 88
>gi|167031542|ref|YP_001666773.1| DNA-cytosine methyltransferase [Pseudomonas putida GB-1]
gi|166858030|gb|ABY96437.1| DNA-cytosine methyltransferase [Pseudomonas putida GB-1]
Length = 377
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 11/87 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLF G GG+ L E + +++ Y NFP T + T
Sbjct: 8 VIDLFSGCGGLGLGAELA----GFHSLAAVDVDKDLQSAYSLNFPLTQTINTDLALVTPS 63
Query: 64 IP-------DHDVLLAGFPCQPFSQAG 83
+ D ++ G PCQ FS+ G
Sbjct: 64 MWKGILKGKRIDGIIGGPPCQGFSRIG 90
>gi|2522459|gb|AAC45757.1| M.BssHII methylase [Geobacillus stearothermophilus]
Length = 375
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 35/94 (37%), Gaps = 12/94 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFP-----------N 49
L LF G GG+ + EQ + +E + + + T + +
Sbjct: 159 LTAFSLFSGAGGLDIGAEQATYKSMKIETLVTLDNWKDACDTLRGFYQGRTSVLQGDISE 218
Query: 50 TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++Q D++ G PCQ FSQAG
Sbjct: 219 IQDPKLLWHQESQHDQIPDIVFGGPPCQAFSQAG 252
>gi|223983703|ref|ZP_03633876.1| hypothetical protein HOLDEFILI_01157 [Holdemania filiformis DSM
12042]
gi|223964334|gb|EEF68673.1| hypothetical protein HOLDEFILI_01157 [Holdemania filiformis DSM
12042]
Length = 340
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 32/88 (36%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L LF GIGG+ L E E Y + ++P F DI
Sbjct: 4 LTHVSLFSGIGGLDLAAEAA----GFRTVCQCEWADYPYSVLEKHWPEVPRFRDITTFTK 59
Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83
+ V+ GFPCQPFS AG
Sbjct: 60 EAFFEKTGLETVTVISGGFPCQPFSTAG 87
>gi|313667096|gb|ADR72993.1| M1.BspMI [Bacillus sp. M(2010)]
Length = 348
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 11/87 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKTQ 62
+ DLF G GG+ + E+ E + + + DI ++ +
Sbjct: 5 VVDLFSGAGGLHIGFEKA----GFEIGLCIDNDINVEKTHKYNFPNIPFMNVDIKELSSD 60
Query: 63 D------IPDHDVLLAGFPCQPFSQAG 83
+ DVL+ G PCQ FS G
Sbjct: 61 QVRNIIGNREVDVLIGGPPCQGFSTIG 87
>gi|255283692|ref|ZP_05348247.1| C-5 cytosine-specific DNA methylase family protein [Bryantella
formatexigens DSM 14469]
gi|255265757|gb|EET58962.1| C-5 cytosine-specific DNA methylase family protein [Bryantella
formatexigens DSM 14469]
Length = 461
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 19/99 (19%)
Query: 3 KITDLFCGIGGIRLDL------EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--- 53
+ +LF G+GG R L E + + S+ P T A+ F
Sbjct: 4 TVCELFAGVGGFRCGLNNIRTAEDYGKEEKWDTVWFSQWEPAEKSTQYAHDCYVYRFGTR 63
Query: 54 ----------GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+I + +PD ++L+ GFPCQ +S A
Sbjct: 64 LDKNGEDTTNYNIEDVDKTTLPDFNLLVGGFPCQDYSVA 102
>gi|261415336|ref|YP_003249019.1| DNA-cytosine methyltransferase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371792|gb|ACX74537.1| DNA-cytosine methyltransferase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326638|gb|ADL25839.1| cytosine specific DNA methyltransferase [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 418
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63
F G G+ + L + ++ +SEI P + +T N PN + GDI+ +D
Sbjct: 24 LSFFSGAMGLDIGLSKA----GIKVLLASEIEPNARRTILTNEPNIGLIGDISDYSAEDI 79
Query: 64 --------IPDHDVLLAGFPCQPFSQAG 83
+ DV++ G PCQ FS AG
Sbjct: 80 RKYANLPKNQEIDVMVGGPPCQAFSTAG 107
>gi|240146838|ref|ZP_04745439.1| putative cytosine-specific methyltransferase protein [Roseburia
intestinalis L1-82]
gi|257201024|gb|EEU99308.1| putative cytosine-specific methyltransferase protein [Roseburia
intestinalis L1-82]
gi|291534422|emb|CBL07534.1| DNA-methyltransferase (dcm) [Roseburia intestinalis M50/1]
gi|291541262|emb|CBL14373.1| DNA-methyltransferase (dcm) [Roseburia intestinalis XB6B4]
Length = 411
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 35/100 (35%), Gaps = 22/100 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV-----------KTYQANFPNT 50
D+F G GG+ L L + F+ E + + + + N
Sbjct: 4 FSYIDIFAGCGGLSLGLHNA----GWKGLFAIEKSKDAFETLKYNLIDTTQHFGWNEWLP 59
Query: 51 LIFGDIAKIKTQDI-------PDHDVLLAGFPCQPFSQAG 83
DI ++ ++ +++ G PCQ FS AG
Sbjct: 60 QTEHDINEVISKYRSELEKLAGTVTLVVGGPPCQGFSMAG 99
>gi|317180853|dbj|BAJ58639.1| Type II DNA modification enzyme [Helicobacter pylori F32]
Length = 312
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+P
Sbjct: 2 DFCSGIGGGRLGLEQ----CHLKCVGHAEINHEALRTYELFFKDTYNFGDLMRINPNDLP 57
Query: 66 DHDVLLAGFPCQPFSQAG 83
D D L++GFPCQ FS G
Sbjct: 58 DFDALISGFPCQAFSING 75
>gi|217034658|ref|ZP_03440063.1| hypothetical protein HP9810_901g5 [Helicobacter pylori 98-10]
gi|216942866|gb|EEC22357.1| hypothetical protein HP9810_901g5 [Helicobacter pylori 98-10]
Length = 312
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+P
Sbjct: 2 DFCSGIGGGRLGLEQ----CHLKCVGHAEINHEALRTYELFFKDTYNFGDLMRINPNDLP 57
Query: 66 DHDVLLAGFPCQPFSQAG 83
D D L++GFPCQ FS G
Sbjct: 58 DFDALISGFPCQAFSING 75
>gi|212633712|ref|YP_002310237.1| site-specific DNA-methyltransferase [Shewanella piezotolerans WP3]
gi|212555196|gb|ACJ27650.1| Site-specific DNA-methyltransferase [Shewanella piezotolerans WP3]
Length = 475
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63
F G G+ L +E + + E++ Y +T N P+T + DI K +
Sbjct: 76 LSFFSGAMGLDLGIE----KSGFDVRLACEVDKYCRQTIALNKPDTALLTDINKYSANEV 131
Query: 64 --------IPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS AG
Sbjct: 132 RLAAGLGKDEEIDLIMGGPPCQAFSTAG 159
>gi|325564165|gb|ADZ31422.1| M.PsuNI [Pseudomonas stutzeri]
Length = 422
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LF G GG +E + V+ + E++ ++ +TY+ NFP+T +F
Sbjct: 18 YTAVSLFSGCGGFCEGIE----NSGVKVKVAVELDKFACQTYRHNFPSTPLFEGDVHNFL 73
Query: 62 QDI---------PDHDVLLAGFPCQPFSQAG 83
D D D++ G PCQ +SQ G
Sbjct: 74 ADGSGHEDEYRLQDVDLVFGGPPCQGYSQIG 104
>gi|148380278|ref|YP_001254819.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum A str.
ATCC 3502]
gi|148289762|emb|CAL83870.1| putative C-5 cytosine-specific DNA methylase [Clostridium
botulinum A str. ATCC 3502]
Length = 340
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59
+K+ LF GIG L +++ E EI+ Y+ Y D++KI
Sbjct: 4 IKLLSLFSGIGAFEKALSN--INQDHEIINYCEIDKYASYAYSVLHNANESLNLGDVSKI 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D D+L G PCQ FS AG
Sbjct: 62 NPDTLKDFDLLTHGSPCQSFSLAG 85
>gi|283457186|ref|YP_003361755.1| site-specific DNA methylase [Rothia mucilaginosa DY-18]
gi|283133170|dbj|BAI63935.1| site-specific DNA methylase [Rothia mucilaginosa DY-18]
Length = 439
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 38/102 (37%), Gaps = 22/102 (21%)
Query: 2 LKITDLFCGIGGIRLDLE------QTFNHRN-VECFFSSEINPY---------SVKTYQA 45
+++ +LF G+GG RL E T ++++ P +
Sbjct: 12 IRVIELFAGVGGFRLGFEGYNANGMTLPSAGPFTTVWANQWEPPGTVGRQFAARCYQERF 71
Query: 46 NFPNTLIFGDIAKIKT------QDIPDHDVLLAGFPCQPFSQ 81
L DI + +IPD D+L GFPCQ +S
Sbjct: 72 GEEANLENRDIHAVLDDVEAGLYEIPDADLLCGGFPCQDYSV 113
>gi|29350162|ref|NP_813665.1| putative cytosine-specific methyltransferase [Bacteroides
thetaiotaomicron VPI-5482]
gi|29342074|gb|AAO79859.1| putative cytosine-specific methyltransferase [Bacteroides
thetaiotaomicron VPI-5482]
Length = 402
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 32/99 (32%), Gaps = 22/99 (22%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----------VKTYQANFPNTL 51
D+F G GG+ L L + F+ E N + V +
Sbjct: 5 TYIDIFAGCGGLSLGLHNA----GWQGLFAVEKNADAFKTLEYNLIEKVNHFLWPDWLPK 60
Query: 52 IFGDIAKIKTQDIPD-------HDVLLAGFPCQPFSQAG 83
DI + D+++ G PCQ FS AG
Sbjct: 61 TSHDINVVLKDYKEQLLGLQRKVDLVVGGPPCQGFSMAG 99
>gi|299469435|emb|CBH51836.1| putative DNA (cytosine-5-)-methyltransferase [Campylobacter fetus
subsp. fetus]
Length = 105
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTF----------------NHRNVECFFSSEINPYSVKTYQA 45
++I DLF GIGG L E N + EI+ K +
Sbjct: 4 MQILDLFSGIGGFSLGFESANFKDYDFLKLPTKQESVNDGFFKTTAFCEIDTNCHKVLKK 63
Query: 46 NFPNTLIFGDIAKIKTQDI---PDHDVLLAGFPCQPFSQAG 83
++ + +IF D+ KI D+ D++ GFPCQ S AG
Sbjct: 64 HWASAIIFNDVTKITKDDLAPLGKIDIITGGFPCQDLSIAG 104
>gi|320109274|ref|YP_004184864.1| DNA-cytosine methyltransferase [Terriglobus saanensis SP1PR4]
gi|319927795|gb|ADV84870.1| DNA-cytosine methyltransferase [Terriglobus saanensis SP1PR4]
Length = 409
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 13/90 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K F G G+ L LEQ +C ++E + + T + N P+ ++ + + T
Sbjct: 8 KFVSFFAGARGLDLGLEQA----GWKCIAANEYDRAASDTIRLNEPDLPLYSEDVRNVTG 63
Query: 63 DIPDHDV---------LLAGFPCQPFSQAG 83
D+ ++ G PCQ FS AG
Sbjct: 64 KRLMKDLGVRPRELYAVVGGPPCQAFSTAG 93
>gi|240143270|ref|ZP_04741871.1| modification methylase BspRI [Roseburia intestinalis L1-82]
gi|257204748|gb|EEV03033.1| modification methylase BspRI [Roseburia intestinalis L1-82]
Length = 432
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 38/105 (36%), Gaps = 24/105 (22%)
Query: 3 KITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINPY 38
+ LF G GG+ L E N+ + ++I
Sbjct: 59 NLLSLFSGCGGLDLGFELAGLKAVMGEEVMEAAFADKKVFDENINNNVFNTIYVNDIFDE 118
Query: 39 SVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +TY N + K ++ P D++L GFPC FS+AG
Sbjct: 119 ARETYAQNAGKYIYMDKSDIRKIKEFPKADIVLGGFPCPGFSEAG 163
>gi|12229856|sp|P94147|MTA1_RUEGE RecName: Full=Modification methylase AgeI; Short=M.AgeI; AltName:
Full=Cytosine-specific methyltransferase AgeI
gi|8037880|gb|AAF71525.1|AF247972_2 AgeI methylase [Thalassobius gelatinovorus]
gi|1695647|dbj|BAA11333.1| ageI metylase [Thalassobius gelatinovorus]
gi|1588637|prf||2209243A AgeI methylase
Length = 429
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52
+K DLFCG GG+ Q ++++ ++ TY+ N P+ +
Sbjct: 1 MKTIDLFCGAGGLGEGFRQA----GFSALYANDHETPALATYKENHPDAVCSTDSIETVD 56
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + DV++ G PCQ FS G
Sbjct: 57 PKKIREDLGVAPGQVDVVMGGPPCQGFSTYG 87
>gi|294673127|ref|YP_003573743.1| C-5 cytosine-specific family DNA methylase [Prevotella ruminicola
23]
gi|294473723|gb|ADE83112.1| DNA methylase, C-5 cytosine-specific family [Prevotella
ruminicola 23]
Length = 346
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 11/88 (12%)
Query: 5 TDLFCGIGGIRLDLEQTF---------NHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55
F G GG+ + + VE ++E ++ +
Sbjct: 13 ISFFSGCGGLDIGTQMAGARIISTLDFEPATVETVKANEFFKFAEHNCADIRNVSGKDYS 72
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ PD +++ G PCQPFS+AG
Sbjct: 73 --ALLRSSNPDKLIIVGGPPCQPFSKAG 98
>gi|210135280|ref|YP_002301719.1| type II R-M system methyltransferase [Helicobacter pylori P12]
gi|210133248|gb|ACJ08239.1| type II R-M system methyltransferase [Helicobacter pylori P12]
Length = 315
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
D GIGG RL LE +++C +EIN +++TY+ F +T FGD+ +I D+P
Sbjct: 2 DFCSGIGGGRLGLE----RCHLKCVGHAEINHEALRTYELFFKDTYNFGDLMRINPNDLP 57
Query: 66 DHDVLLAGFPCQPFSQAG 83
D D L++GFPCQ FS G
Sbjct: 58 DFDALISGFPCQAFSING 75
>gi|90592696|ref|YP_529611.1| hypothetical protein CDBPCV119_gp60 [Clostridium phage phi CD119]
gi|71482543|gb|AAX53484.1| hypothetical protein [Clostridium phage phi CD119]
Length = 260
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 11 IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIAKIKTQDIPDH 67
IGG RL +E+ +C E + ++ +Y A DI +I+T++IP
Sbjct: 18 IGGFRLGMEKA----GHKCLGHCEYDKFANLSYNAMHKPKEDEWFERDIREIRTENIPRA 73
Query: 68 DVLLAGFPCQPFSQAG 83
DV GFPCQ S AG
Sbjct: 74 DVWCFGFPCQDISVAG 89
>gi|62946466|ref|YP_227670.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
gi|17134568|dbj|BAB77127.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
Length = 253
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Query: 1 MLKITDLFCGIGGI-RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
M I LF GIGG+ + + EI+PYS + P T I DI
Sbjct: 1 MKSILSLFSGIGGLCHHGIAAAGLSHKFQVKQFVEISPYSQSRLRHEQPQTPIHSDITTY 60
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D++ G PCQ S AG
Sbjct: 61 H-CHRGQFDIVAGGLPCQGTSNAG 83
>gi|123441984|ref|YP_001005967.1| prophage encoded DNA modification methylase [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122088945|emb|CAL11755.1| prophage encoded DNA modification methylase [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 452
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 18/100 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTF---------NHRNVECFFSSEINPYSVKTYQANFPNTLI 52
+ DLF G GG L L + N E + I A+ +L
Sbjct: 1 MNFIDLFSGCGGFSLGLLKAGLTGRLAVEKNQDAFETLKRNLIEGNKFSYSWASEKISLD 60
Query: 53 FGDIAKIKTQ---------DIPDHDVLLAGFPCQPFSQAG 83
DI + + D + D+++ G PCQ FS AG
Sbjct: 61 NHDIHTLLDKYSSYLSELGDGREIDLVVGGPPCQGFSSAG 100
>gi|312200730|ref|YP_004020791.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c]
gi|311232066|gb|ADP84921.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c]
Length = 464
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 10/85 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ DLFCG GG+ E +++ +P + TY+ NF + ++
Sbjct: 34 KLVDLFCGAGGLSEGF----RRVGFEVVAAADHDPDACATYERNFARAEVLCGDLRLPAL 89
Query: 63 DIPDHDV------LLAGFPCQPFSQ 81
D+ ++ G PCQ +SQ
Sbjct: 90 RERLVDLAAGADMIVGGPPCQAYSQ 114
>gi|257069715|ref|YP_003155970.1| DNA-methyltransferase Dcm [Brachybacterium faecium DSM 4810]
gi|256560533|gb|ACU86380.1| DNA-methyltransferase Dcm [Brachybacterium faecium DSM 4810]
Length = 431
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF---------GD 55
DLF G GG+ L LEQ E S E +P ++ NFP F
Sbjct: 11 VDLFAGAGGLSLGLEQA----GFEIAASVEYDPIHAAVHEFNFPYGKTFASDVSKVTGEQ 66
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + ++ G PCQ S G
Sbjct: 67 IRRESEIGDREIHLVAGGPPCQGISMIG 94
>gi|328914001|gb|AEB65597.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens LL3]
Length = 600
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 19/97 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
K+ DLF G GG+ EQT E + EIN +++TY N
Sbjct: 11 FKLVDLFAGAGGLSKGFEQTGC---FETIGAVEINQAAIETYVYNHGGNRDIIIRPDESD 67
Query: 55 --DIAKIKTQDI-------PDHDVLLAGFPCQPFSQA 82
DI+KI + P+ ++ G PCQ FS A
Sbjct: 68 TSDISKIDFRKWKKSKNIDPNLLTIIGGPPCQGFSNA 104
>gi|308175642|ref|YP_003922347.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens DSM
7]
gi|307608506|emb|CBI44877.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens DSM
7]
gi|328555623|gb|AEB26115.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens
TA208]
Length = 597
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 19/97 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
K+ DLF G GG+ EQT E + EIN +++TY N
Sbjct: 8 FKLVDLFAGAGGLSKGFEQTGC---FETIGAVEINQAAIETYVYNHGGNRDIIIRPDESD 64
Query: 55 --DIAKIKTQDI-------PDHDVLLAGFPCQPFSQA 82
DI+KI + P+ ++ G PCQ FS A
Sbjct: 65 TSDISKIDFRKWKKSKNIDPNLLTIIGGPPCQGFSNA 101
>gi|225164697|ref|ZP_03726934.1| DNA-cytosine methyltransferase [Opitutaceae bacterium TAV2]
gi|224800687|gb|EEG19046.1| DNA-cytosine methyltransferase [Opitutaceae bacterium TAV2]
Length = 372
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
+ ++ G GG L L Q + EI+ + KT + + D+ +I+
Sbjct: 5 FSVFEICAGAGGQALGLHQA----GFASAGAVEIDSDACKTLRLNRPDWNVFECDVREIR 60
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+D D+L G PC PFS AG
Sbjct: 61 GRDFAGVDLLAGGVPCPPFSTAG 83
>gi|317401187|gb|EFV81833.1| hypothetical protein HMPREF0005_01193 [Achromobacter xylosoxidans
C54]
Length = 571
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 31/91 (34%), Gaps = 15/91 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L DLF G GG L E + C + + N + G + +
Sbjct: 41 LTFLDLFSGCGGFSLGFEAA----GLVCKAAVDSNE-AAIETFKANHTKGALGLVRDLTK 95
Query: 62 QDIPDHD----------VLLAGFPCQPFSQA 82
D D V++ G PCQ FS+A
Sbjct: 96 FSPKDLDKLLGGSVRINVIVGGPPCQGFSKA 126
>gi|157412795|ref|YP_001483661.1| site-specific DNA methylase [Prochlorococcus marinus str. MIT 9215]
gi|157387370|gb|ABV50075.1| Site-specific DNA methylase [Prochlorococcus marinus str. MIT 9215]
Length = 698
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 12/85 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------IAK 58
DLF G GG+ L L + N + + +I S+ T++ +F D I +
Sbjct: 55 VDLFSGAGGLSLGLHRA----NFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINE 110
Query: 59 IKTQ--DIPDHDVLLAGFPCQPFSQ 81
I Q + ++ G PCQPFS+
Sbjct: 111 ISEQLNKCGEISLIAGGPPCQPFSR 135
>gi|123967970|ref|YP_001008828.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str.
AS9601]
gi|123198080|gb|ABM69721.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str.
AS9601]
Length = 698
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 12/85 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------IAK 58
DLF G GG+ L L + N + + +I S+ T++ +F D I +
Sbjct: 55 VDLFSGAGGLSLGLHRA----NFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINE 110
Query: 59 IKTQ--DIPDHDVLLAGFPCQPFSQ 81
I Q + ++ G PCQPFS+
Sbjct: 111 ISEQLNKCGEISLIAGGPPCQPFSR 135
>gi|91069833|gb|ABE10765.1| C-5 cytosine-specific DNA methylase [uncultured Prochlorococcus
marinus clone ASNC1092]
Length = 686
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 12/85 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------IAK 58
DLF G GG+ L L + N + + +I S+ T++ +F D I +
Sbjct: 55 VDLFSGAGGLSLGLHRA----NFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINE 110
Query: 59 IKTQ--DIPDHDVLLAGFPCQPFSQ 81
I Q + ++ G PCQPFS+
Sbjct: 111 ISEQLNKCGEISLIAGGPPCQPFSR 135
>gi|78778763|ref|YP_396875.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9312]
gi|78712262|gb|ABB49439.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9312]
Length = 686
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 12/85 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------IAK 58
DLF G GG+ L L + N + + +I S+ T++ +F D I +
Sbjct: 55 VDLFSGAGGLSLGLHRA----NFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINE 110
Query: 59 IKTQ--DIPDHDVLLAGFPCQPFSQ 81
I Q + ++ G PCQPFS+
Sbjct: 111 ISEQLNKCGEISLIAGGPPCQPFSR 135
>gi|284159927|ref|YP_001060514.2| BsaWI methylase [Burkholderia pseudomallei 668]
gi|283775103|gb|ABN83996.2| BsaWI methylase [Burkholderia pseudomallei 668]
Length = 440
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 35/106 (33%), Gaps = 28/106 (26%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-------------INPYSVKTYQANFP 48
DLF G GG+ L L E F+ E I+ + A +P
Sbjct: 3 YTSIDLFAGCGGLSLGLHYA----GWEGLFAVERDAMAFETLYRNMIDGAAAYPNYAAWP 58
Query: 49 NTLIFGDIAKIKTQDI-----------PDHDVLLAGFPCQPFSQAG 83
L +I K D D+++ G PCQ FS G
Sbjct: 59 AWLEKTNIDLTKLLDNQQSRRQLRALSGTVDLIVGGPPCQGFSVGG 104
>gi|237704019|ref|ZP_04534500.1| DNA methyltransferase [Escherichia sp. 3_2_53FAA]
gi|20068985|gb|AAM09639.1|AF458982_2 m5 cytosine DNA methyltransferase [Escherichia coli]
gi|226901931|gb|EEH88190.1| DNA methyltransferase [Escherichia sp. 3_2_53FAA]
gi|281181427|dbj|BAI57757.1| methyltransferase [Escherichia coli SE15]
gi|315286888|gb|EFU46305.1| C-5 cytosine-specific DNA methylase [Escherichia coli MS 110-3]
gi|323955407|gb|EGB51176.1| C-5 cytosine-specific DNA methylase [Escherichia coli H263]
Length = 396
Score = 67.7 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 30/93 (32%), Gaps = 17/93 (18%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-------------VKTYQANFPNT 50
DLF G GG+ L + +++I + N +
Sbjct: 151 YIDLFSGAGGLGLGFKWA----GWTPLLANDIEEKYLQTYSNNVHKEVLCGSISDNETFS 206
Query: 51 LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I I+ K +L G PCQ FS AG
Sbjct: 207 KIADKISGFKKLYFDKQLWILGGPPCQGFSTAG 239
>gi|331085773|ref|ZP_08334856.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406696|gb|EGG86201.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 356
Score = 67.7 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 32/92 (34%), Gaps = 16/92 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----------NTL 51
+ DLF G GG+ + + ++ T+ N
Sbjct: 1 MNAIDLFAGCGGLSKGFMDA----GYNIIVGVDNDQAALNTFAKNHNGAVALNADLSKQE 56
Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
F +I +I DV++AG PCQ FS G
Sbjct: 57 TFDEIKRIAG--KRKIDVIIAGPPCQGFSLTG 86
>gi|157952392|ref|YP_001497284.1| hypothetical protein NY2A_B088L [Paramecium bursaria Chlorella
virus NY2A]
gi|155122619|gb|ABT14487.1| hypothetical protein NY2A_B088L [Paramecium bursaria Chlorella
virus NY2A]
Length = 343
Score = 67.7 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML+ DLF GIGG L + E + FP+ IF D+
Sbjct: 4 MLRSLDLFSGIGGNSYALRDIL-----KPVAYVEREQHLRDFLGRKFPDVPIFDDVVTFD 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
T+ + D D++ AGFPC FS AG
Sbjct: 59 TRSVKDIDIITAGFPCTGFSTAG 81
>gi|329955696|ref|ZP_08296604.1| DNA (cytosine-5-)-methyltransferase [Bacteroides clarus YIT 12056]
gi|328526099|gb|EGF53123.1| DNA (cytosine-5-)-methyltransferase [Bacteroides clarus YIT 12056]
Length = 465
Score = 67.7 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 40/120 (33%), Gaps = 38/120 (31%)
Query: 2 LKITDLFCGIGGIRLDLEQTF-------------------------NHRNVECFFSSEIN 36
LKI LF G GG+ L E +F N F+++I
Sbjct: 54 LKILSLFSGCGGMDLGFEGSFIAPYKSIAPHPEWIEKHINEDWVSVKPTNFSLVFANDIL 113
Query: 37 PYSVKTYQANFPNTLIFGDIAKIKT-------------QDIPDHDVLLAGFPCQPFSQAG 83
+ T+ I + ++ + DV++ GFPCQ FS +G
Sbjct: 114 KEASLTWTRFMKRYGYDPSIYRTESVVDLVKQHKKGVKIFPENVDVVVGGFPCQDFSVSG 173
>gi|257877765|ref|ZP_05657418.1| cytosine specific DNA methyltransferase [Enterococcus
casseliflavus EC20]
gi|257811931|gb|EEV40751.1| cytosine specific DNA methyltransferase [Enterococcus
casseliflavus EC20]
Length = 380
Score = 67.7 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--------TLIF 53
+ DLF G GG+ Q + + + +++TY N
Sbjct: 5 YSVIDLFSGAGGLSQGFVQA----GFDVLAGIDFDDAALRTYGHNIKGAKALKEDLFDEE 60
Query: 54 GDIAKIKTQ-DIPDHDVLLAGFPCQPFSQAG 83
I I+ + DV++AG PCQ FS G
Sbjct: 61 KSIRDIEKNLANKNIDVIIAGPPCQGFSLTG 91
>gi|153955901|ref|YP_001396666.1| hypothetical protein CKL_3292 [Clostridium kluyveri DSM 555]
gi|219856251|ref|YP_002473373.1| hypothetical protein CKR_2908 [Clostridium kluyveri NBRC 12016]
gi|146348759|gb|EDK35295.1| Phage-related protein [Clostridium kluyveri DSM 555]
gi|219569975|dbj|BAH07959.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 302
Score = 67.7 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L LF GIGGI L E + E Y + + ++P+ + D+ I
Sbjct: 14 LTHFSLFTGIGGIDLAAEWA----GFKTVGQCEFADYPTRVLEKHWPDVERWKDVRSITV 69
Query: 60 ---KTQDIPDHDVLLAGFPCQPFSQAG 83
+ + I + VL AGFPCQP S AG
Sbjct: 70 ESVRERGIQEVTVLSAGFPCQPHSVAG 96
>gi|237742048|ref|ZP_04572529.1| site-specific DNA-methyltransferase [Fusobacterium sp. 4_1_13]
gi|229429696|gb|EEO39908.1| site-specific DNA-methyltransferase [Fusobacterium sp. 4_1_13]
Length = 440
Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 37/103 (35%), Gaps = 28/103 (27%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---------TLIFGD 55
DLFCG GG+ + Q FS+EI+ + +TY+ L D
Sbjct: 13 IDLFCGAGGMSEGILQA----GFHIIFSNEISKDASETYRKRHEQLGLEQGKNTWLEVAD 68
Query: 56 IAKIKTQDIPDH---------------DVLLAGFPCQPFSQAG 83
I I I D + G PCQ FS+AG
Sbjct: 69 IKNITGTYIKKKISELKDFKENKNIEIDAIFGGPPCQGFSRAG 111
>gi|171911881|ref|ZP_02927351.1| DNA-cytosine methyltransferase [Verrucomicrobium spinosum DSM
4136]
Length = 330
Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 9/80 (11%)
Query: 5 TDLFCGIGGIRLDLEQTFNH-RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
DLF G GG+ L E E + + +Y+ N +
Sbjct: 23 IDLFAGCGGLALGFESAGISTIGF------EKDRDACASYRRNLGGECFETLLTP--ESQ 74
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
P D+++ G PCQPFS G
Sbjct: 75 FPKCDLIIGGPPCQPFSVGG 94
>gi|326381717|ref|ZP_08203411.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL
B-59395]
gi|326199964|gb|EGD57144.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL
B-59395]
Length = 356
Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 10/87 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKT 61
DLF G GG+ L+Q+ +EC +S+ + + I D+ K+
Sbjct: 10 TFIDLFAGAGGLSWGLQQS----GMECLLASDYWGDALKTYSHNMPDHPTIECDVRKLTM 65
Query: 62 QD-----IPDHDVLLAGFPCQPFSQAG 83
D ++ G PCQ +S G
Sbjct: 66 PKLAQLLPEKPDWVVGGPPCQGYSTVG 92
>gi|306817606|ref|ZP_07451349.1| modification methylase Eco47II [Mobiluncus mulieris ATCC 35239]
gi|307699879|ref|ZP_07636930.1| DNA binding domain protein, excisionase family [Mobiluncus mulieris
FB024-16]
gi|304649648|gb|EFM46930.1| modification methylase Eco47II [Mobiluncus mulieris ATCC 35239]
gi|307614917|gb|EFN94135.1| DNA binding domain protein, excisionase family [Mobiluncus mulieris
FB024-16]
Length = 424
Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI--AKI 59
DLF G GG L LE SE++ +V T + N PN + +
Sbjct: 77 FTSVDLFAGAGGTALGLENA----GFRHVLLSELDKDAVATLRLNRPNWNVSAGDVASLD 132
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D++ GFPCQ FS AG
Sbjct: 133 FRAFAGKVDLVEGGFPCQAFSYAG 156
>gi|269976186|ref|ZP_06183182.1| modification methylase Eco47II [Mobiluncus mulieris 28-1]
gi|269935515|gb|EEZ92053.1| modification methylase Eco47II [Mobiluncus mulieris 28-1]
Length = 424
Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI--AKI 59
DLF G GG L LE SE++ +V T + N PN + +
Sbjct: 77 FTSVDLFAGAGGTALGLENA----GFRHVLLSELDKDAVATLRLNRPNWNVSAGDVASLD 132
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D++ GFPCQ FS AG
Sbjct: 133 FRAFAGKVDLVEGGFPCQAFSYAG 156
>gi|227876656|ref|ZP_03994765.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC
35243]
gi|227842553|gb|EEJ52753.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC
35243]
Length = 424
Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI--AKI 59
DLF G GG L LE SE++ +V T + N PN + +
Sbjct: 77 FTSVDLFAGAGGTALGLENA----GFRHVLLSELDKDAVATLRLNRPNWNVSAGDVASLD 132
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D++ GFPCQ FS AG
Sbjct: 133 FRAFAGKVDLVEGGFPCQAFSYAG 156
>gi|282598683|ref|YP_003358780.1| gp77 [Mycobacterium phage Peaches]
gi|255928210|gb|ACU41828.1| gp77 [Mycobacterium phage Peaches]
gi|302858592|gb|ADL71338.1| gp78 [Mycobacterium phage Eagle]
Length = 177
Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+I LF G GG+ L +E+ F + + E+ + F + D++K+
Sbjct: 6 RIGSLFSGAGGLDLAVEEVF---GGQTIWQVEVEKAAATLLAKRFGVPNLG-DVSKVNWH 61
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
++P D+L GFPCQ S AG
Sbjct: 62 EVPAVDILCGGFPCQDVSPAG 82
>gi|302873652|ref|YP_003842285.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|307686624|ref|ZP_07629070.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|302576509|gb|ADL50521.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
Length = 445
Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 35/108 (32%), Gaps = 29/108 (26%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M DLFCG GG+ L Q FSS+IN +TY + +
Sbjct: 1 MPYAIDLFCGAGGMSEGLIQA----GFHILFSSDINEDVQRTYMNRHEQLGLLQGVNTHY 56
Query: 61 TQD-------------------------IPDHDVLLAGFPCQPFSQAG 83
+ D D + G PCQ FS+AG
Sbjct: 57 HRGDVRELTGEFIRNSIQNLAIFAEGSVPEDIDAIFGGPPCQGFSRAG 104
>gi|210630924|ref|ZP_03296669.1| hypothetical protein COLSTE_00554 [Collinsella stercoris DSM 13279]
gi|210160239|gb|EEA91210.1| hypothetical protein COLSTE_00554 [Collinsella stercoris DSM 13279]
Length = 931
Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 24/106 (22%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN----------VECFFSSEINPY--------SVKT 42
++++ +LF G+GG RL LE N ++++ P +
Sbjct: 510 VIRVAELFAGVGGFRLGLEGYSNEDRPEFSMPAAGPFVTVWANQWEPQGAPTRQFAARCY 569
Query: 43 YQANFPNTLIFGDIAKI------KTQDIPDHDVLLAGFPCQPFSQA 82
+ +++ DI + DIPD D+++ GFPCQ +S A
Sbjct: 570 EERFGYGSVVNEDIHVVLDAYEAGKIDIPDVDMVVGGFPCQDYSVA 615
>gi|15894780|ref|NP_348129.1| DNA-methyltransferase (cytosine-specific), ortholog of BSP6I
Bsubtilis [Clostridium acetobutylicum ATCC 824]
gi|15024448|gb|AAK79469.1|AE007660_12 DNA-methyltransferase (cytosine-specific), ortholog of BSP6I
Bsubtilis [Clostridium acetobutylicum ATCC 824]
gi|325508918|gb|ADZ20554.1| DNA-methyltransferase (cytosine-specific) [Clostridium
acetobutylicum EA 2018]
Length = 415
Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 47/130 (36%), Gaps = 48/130 (36%)
Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+ LF G+GGI L + + +++EI+ Y+ +TY+ NF + LI GDI KI
Sbjct: 6 FTVGSLFAGVGGICLGFKTAEYRGLGYNLIWANEIDEYAGETYRHNFDHNLIAGDIEKIV 65
Query: 61 TQDIPDH-----------------------------------------------DVLLAG 73
+I DVL G
Sbjct: 66 DLNIIQSEQNRYINIMNEVATDEERIKYKVLIEKCEEEKQIYREKQKQILSSKIDVLNGG 125
Query: 74 FPCQPFSQAG 83
FPCQ FS AG
Sbjct: 126 FPCQAFSIAG 135
>gi|225386628|ref|ZP_03756392.1| hypothetical protein CLOSTASPAR_00376 [Clostridium asparagiforme
DSM 15981]
gi|225047326|gb|EEG57572.1| hypothetical protein CLOSTASPAR_00376 [Clostridium asparagiforme
DSM 15981]
Length = 340
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L LF GIGG+ L E E E + A +P+ F DI
Sbjct: 4 LTHVSLFSGIGGLDLAAEAA----GFETVCQCEWADFPHSVLSARWPDVPRFRDITTFTK 59
Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83
+ V+ GFPCQPFS AG
Sbjct: 60 EAFFEKTGLETVTVISGGFPCQPFSTAG 87
>gi|188533112|ref|YP_001906909.1| C-5 cytosine-specific DNA methylase family protein [Erwinia
tasmaniensis Et1/99]
gi|188028154|emb|CAO96012.1| C-5 cytosine-specific DNA methylase family protein [Erwinia
tasmaniensis Et1/99]
Length = 395
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 34/93 (36%), Gaps = 18/93 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------D 55
+ DLF G GG L +E + E++ + TY N D
Sbjct: 10 INGIDLFSGAGGFSL----AALELGIEILAAIELDKDACDTYDKNLIQKRKNNIKLINKD 65
Query: 56 IAKIKTQDIPDH--------DVLLAGFPCQPFS 80
I I ++ D D+++ G PCQ FS
Sbjct: 66 IIAIPPSELMDSLHLKERELDLIIGGPPCQGFS 98
>gi|146309050|ref|YP_001189515.1| DNA-cytosine methyltransferase [Pseudomonas mendocina ymp]
gi|145577251|gb|ABP86783.1| DNA-cytosine methyltransferase [Pseudomonas mendocina ymp]
Length = 365
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 10/89 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKI 59
ML + DLF G GG+ L +Q + +I+P S + D+ +
Sbjct: 1 MLTLLDLFSGCGGLTLGAKQA----GFTTELAVDIDPILSSSFGLNFPSVPFLNADVTTL 56
Query: 60 KTQDIPD-----HDVLLAGFPCQPFSQAG 83
+ + D ++ G PCQ FS G
Sbjct: 57 TSDRLKALLPSGVDGVIGGPPCQAFSGMG 85
>gi|282859820|ref|ZP_06268914.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010]
gi|282587440|gb|EFB92651.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010]
Length = 356
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ DLFCGIGG+ + + + Y+ N DI K+
Sbjct: 6 IKVVDLFCGIGGLSNGF----FQEGFDVVAGYDNDKSCKFAYEVNNHAKFHLADITKVTG 61
Query: 62 QDIPDHD-----VLLAGFPCQPFS 80
++I +L+ PCQPFS
Sbjct: 62 KEINQQFGDSLKILVGCAPCQPFS 85
>gi|316934943|ref|YP_004109925.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1]
gi|315602657|gb|ADU45192.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1]
Length = 495
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 23/100 (23%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--------- 53
++ DLF G GG+ L E S EI+ + +++ NF
Sbjct: 23 RVLDLFSGCGGLSLGFHSA----GYEIAASVEIDELAARSHAINFYKGQAPELIERQAVA 78
Query: 54 GDIAKIKTQDIPD----------HDVLLAGFPCQPFSQAG 83
DI KI D+ D+++ G PCQ +++ G
Sbjct: 79 RDITKIDPDDLTSDLGLGPSKLAFDLIVGGPPCQAYARVG 118
>gi|283852745|ref|ZP_06370009.1| C-5 cytosine-specific DNA methylase [Desulfovibrio sp. FW1012B]
gi|283571826|gb|EFC19822.1| C-5 cytosine-specific DNA methylase [Desulfovibrio sp. FW1012B]
Length = 264
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ LF G G + E + + E +P++ + +P +F D+ I Q+
Sbjct: 14 VGSLFSGAGLGDIAAE----AIGLSHAWFCECDPFARSILERRWPGVPVFHDVRDIHAQN 69
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
D+++ GFPCQ S AG
Sbjct: 70 AKRVDIVIGGFPCQDISCAG 89
>gi|331270911|ref|YP_004385622.1| putative cytosine-specific DNA methylotransferase [Clostridium
botulinum BKT015925]
gi|329127303|gb|AEB77247.1| putative cytosine-specific DNA methylotransferase [Clostridium
botulinum BKT015925]
Length = 318
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+ K +LF G G + L ++ EC SE++ Y++K Y++NFPN + +GDI KI
Sbjct: 3 IFKYLELFAGSGLGGMVL----DNYGGECIGYSEVDKYAIKNYESNFPNKINYGDITKIN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81
+++P D+L+ G PCQ S
Sbjct: 59 EKELPKFDLLIGGSPCQNISI 79
>gi|307152624|ref|YP_003888008.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306982852|gb|ADN14733.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 708
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLF G GG+ L E + E++ + TYQ N + +
Sbjct: 34 VIDLFAGCGGLALGFEAA----GFKTTGY-EMSEEACATYQYNLHGRCENITLTR-YPTL 87
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
I + V++AG PCQPFS+ G
Sbjct: 88 IDNPKVIIAGPPCQPFSKGG 107
>gi|3746579|gb|AAC64006.1| cytosine methyltransferase [Paramecium bursaria Chlorella virus
NYs1]
Length = 362
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV-ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
LK +LF GI GI L R E EIN + + FP+ +F D+ K
Sbjct: 3 LKALELFAGIAGITHGL------RGFVEPVAFVEINKDAQEFLSTKFPDKPVFDDVTKFS 56
Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83
+D D++ GFPC FS AG
Sbjct: 57 KRDFDEPIDMITGGFPCTGFSIAG 80
>gi|94958344|gb|ABF47306.1| Dcm [Clostridium perfringens]
gi|94958377|gb|ABF47337.1| Dcm [Clostridium perfringens]
Length = 339
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59
+K+ LF GIG +E + E E + Y+ Y F D+ +
Sbjct: 1 MKVLSLFSGIGAFERAIEN--KNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVNWV 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D D++ GFPC S AG
Sbjct: 59 DGTHFKDIDLITYGFPCTDISLAG 82
>gi|298385398|ref|ZP_06994956.1| C-5 cytosine-specific DNA methylase superfamily [Bacteroides sp.
1_1_14]
gi|298261539|gb|EFI04405.1| C-5 cytosine-specific DNA methylase superfamily [Bacteroides sp.
1_1_14]
Length = 420
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
LF G + + F EINP+ + + FPN+ + DI K
Sbjct: 5 HGSLFSG---FD-APSVAASWMGWKNAFHCEINPFCNEILKYWFPNSEHYEDITKTDFSQ 60
Query: 64 IP-DHDVLLAGFPCQPFSQAG 83
DVL GFPCQPFS AG
Sbjct: 61 WKGRIDVLTGGFPCQPFSLAG 81
>gi|284053383|ref|ZP_06383593.1| hypothetical protein AplaP_18124 [Arthrospira platensis str.
Paraca]
gi|291571237|dbj|BAI93509.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
Length = 451
Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKTQD 63
DLF G GG+ ++ + F+++ + + + I + +
Sbjct: 9 IDLFAGAGGMTTGF----KNQGFKLLFANDCDQAALATLSHNHPEAMTSSESIESLNPFE 64
Query: 64 --------IPDHDVLLAGFPCQPFSQAG 83
D D+LL G PCQ FS G
Sbjct: 65 LRQTLNLRKGDLDILLGGPPCQGFSTYG 92
>gi|79835456|gb|ABB52087.1| Mod [Arthrospira platensis]
Length = 443
Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKTQD 63
DLF G GG+ ++ + F+++ + + + I + +
Sbjct: 9 IDLFAGAGGMTTGF----KNQGFKLLFANDCDQAALATLSHNHPEAMTSSESIESLNPFE 64
Query: 64 --------IPDHDVLLAGFPCQPFSQAG 83
D D+LL G PCQ FS G
Sbjct: 65 LRQTLNLRKGDLDILLGGPPCQGFSTYG 92
>gi|325478716|gb|EGC81827.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 480
Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ LF G GG L ++ ++SE+ P+ ++ Q N P GDI I
Sbjct: 5 LRLGSLFDGSGGFPL----AAIFCEIKPIWASEVEPFPIRVTQKNLPQVKHLGDINDIDG 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
I D++ G PCQ S AG
Sbjct: 61 SGIEPVDIISFGSPCQDLSIAG 82
>gi|328947595|ref|YP_004364932.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
gi|328447919|gb|AEB13635.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
Length = 476
Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
F G G+ +E+ + +SEI P + KT N PN + GDI +DI
Sbjct: 78 LSFFSGAMGLDYGIEKA----GIHPLLASEIEPNARKTILLNRPNIGLIGDINNYSAKDI 133
Query: 65 ---------PDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS AG
Sbjct: 134 RKFANISEKQEIDLVIGGPPCQAFSTAG 161
>gi|257867246|ref|ZP_05646899.1| DNA methyltransferase [Enterococcus casseliflavus EC30]
gi|257873580|ref|ZP_05653233.1| DNA methyltransferase [Enterococcus casseliflavus EC10]
gi|257801302|gb|EEV30232.1| DNA methyltransferase [Enterococcus casseliflavus EC30]
gi|257807744|gb|EEV36566.1| DNA methyltransferase [Enterococcus casseliflavus EC10]
Length = 470
Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 32/92 (34%), Gaps = 14/92 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV------KTYQANFPNTLIFGD 55
+ + F G GG+ L LE+ EI+ + + +
Sbjct: 135 YTLVETFAGAGGLSLGLEKA----GFNSVADIEIDSTACSTLKLNRPNWNVIEGDINTIA 190
Query: 56 IAKIKTQDI----PDHDVLLAGFPCQPFSQAG 83
I D + DVL G+PCQ FS AG
Sbjct: 191 QNGIFNHDQFTFRGELDVLSGGYPCQSFSYAG 222
>gi|123965679|ref|YP_001010760.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9515]
gi|123200045|gb|ABM71653.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9515]
Length = 689
Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 12/85 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT--- 61
DLF G GG+ L L + N + + +I S+ T++ +F D++K K
Sbjct: 55 VDLFSGAGGLSLGLHRA----NFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVVNE 110
Query: 62 -----QDIPDHDVLLAGFPCQPFSQ 81
+ + ++ G PCQPFS+
Sbjct: 111 IADKLNECGEISLIAGGPPCQPFSR 135
>gi|291561285|emb|CBL40084.1| DNA-methyltransferase (dcm) [butyrate-producing bacterium SS3/4]
Length = 247
Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS--VKTYQANFPNTLIFGDIAK 58
M++ LF GIG L+ E E++ Y+ + + P ++ GDI K
Sbjct: 1 MIRYLSLFSGIGAFEKALDNLGIP--YELLAYCEVDKYASKAYSLLHHVPESMNLGDITK 58
Query: 59 IKTQDIPDH-DVLLAGFPCQPFSQAG 83
+ + +P D+L GFPCQ S AG
Sbjct: 59 VDEKALPTDIDLLTYGFPCQDISIAG 84
>gi|333024773|ref|ZP_08452837.1| putative DNA-cytosine methyltransferase [Streptomyces sp. Tu6071]
gi|332744625|gb|EGJ75066.1| putative DNA-cytosine methyltransferase [Streptomyces sp. Tu6071]
Length = 386
Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Query: 6 DLFCGIGGIRLDLEQTFNHRN-----VECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
DLF G GG + + E++P + TY ANFP+ + I
Sbjct: 2 DLFAGAGGFSAGFH-AYRPDGPASSPFRTLAAVEMDPAAAATYAANFPSAKVSAIRIEGW 60
Query: 60 KTQDIPDHDVLLAGFPCQPFS 80
DV++ G PCQ FS
Sbjct: 61 DPTPYEGVDVIMGGPPCQGFS 81
>gi|400283|sp|P31974|MTA1_CELCE RecName: Full=Modification methylase AluI; Short=M.AluI; AltName:
Full=Cytosine-specific methyltransferase AluI
gi|580712|emb|CAA77866.1| Alu I DNA-(cytosine C5)-methyltransferase [Cellulosimicrobium
cellulans]
gi|300124216|gb|ADJ68011.1| M.AluI [Cellulosimicrobium cellulans]
Length = 521
Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 12/89 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF GIGG L C ++ EI+ + Y+ N+ + DI
Sbjct: 8 YSFVDLFAGIGGFHAAL----AATGGVCEYAVEIDREAAAVYERNWNKPALG-DITDDAN 62
Query: 62 QD-------IPDHDVLLAGFPCQPFSQAG 83
+ DVL GFPCQPFS++G
Sbjct: 63 DEGVTLRGYDGPIDVLTGGFPCQPFSKSG 91
>gi|328769954|gb|EGF79997.1| hypothetical protein BATDEDRAFT_35320 [Batrachochytrium
dendrobatidis JAM81]
Length = 621
Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ + F GIGG+ LE + + +INP + Y NF + I + +
Sbjct: 6 RALEFFSGIGGMHFGLEWAAIDA--KVVAAFDINPQANACYNHNFGLEPVEKSIQDLNPK 63
Query: 63 DIPDHD--VLLAGFPCQPFSQAG 83
++ +D L PCQP+++ G
Sbjct: 64 ELERYDANCWLMSPPCQPYTRTG 86
>gi|189350232|ref|YP_001945860.1| DNA (cytosine-5-)-methyltransferase [Burkholderia multivorans
ATCC 17616]
gi|189334254|dbj|BAG43324.1| DNA (cytosine-5-)-methyltransferase [Burkholderia multivorans
ATCC 17616]
Length = 380
Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + GI ++ F SEI P+ ++P+ GD+ K
Sbjct: 3 FRFGSVCSGI----EAASCAWHPLGWRTAFVSEIEPFPCAVLAHHYPSVPNLGDMTNFKE 58
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+L+ G PCQ FS AG
Sbjct: 59 WPDAAIDLLVGGTPCQSFSVAG 80
>gi|86151502|ref|ZP_01069717.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni
260.94]
gi|85841849|gb|EAQ59096.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni
260.94]
Length = 187
Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
KI DLFCG GG EQ + N + + N ++++T++ N P++ +
Sbjct: 3 FKILDLFCGAGGFSNGFEQ---NENFKTIIGVDFNKFALETFKYNHPDSKVICGDLKDAL 59
Query: 57 ---AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I ++++ G PCQ FS G
Sbjct: 60 VKSYIIDEAQKNGINMIIGGPPCQGFSSKG 89
>gi|255073161|ref|XP_002500255.1| DNA methyltransferase [Micromonas sp. RCC299]
gi|226515517|gb|ACO61513.1| DNA methyltransferase [Micromonas sp. RCC299]
Length = 599
Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---------- 51
++LF G+GG + L F+SE+ ++ +TY A+ +
Sbjct: 264 FTFSELFAGVGGFGVAL----RSLGGTPVFASELCGHARRTYLAHHGGSWGDDGGTDARP 319
Query: 52 ---IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
GDI + +P HD+L GFPCQ FS+ G
Sbjct: 320 PLVCCGDITDVCETSMPPHDLLTGGFPCQSFSRRG 354
>gi|291544930|emb|CBL18039.1| Site-specific DNA methylase [Ruminococcus sp. 18P13]
Length = 362
Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GI L L++ VEC+ + EI+ Y+V + NFP + G++
Sbjct: 1 MKVLSLFDGISCGMLALQRAGIP--VECYDAFEIDKYAVTVSKRNFPVIVHHGNVYDGDF 58
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
+D+LL G PC +S A
Sbjct: 59 TQFKGYDLLLGGSPCTYWSIA 79
>gi|116251696|ref|YP_767534.1| modification methylase [Rhizobium leguminosarum bv. viciae 3841]
gi|115256344|emb|CAK07425.1| putative modification methylase [Rhizobium leguminosarum bv. viciae
3841]
Length = 666
Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
L + +L G GGI L LE E + ++ ++ GDI ++
Sbjct: 293 LNVVELCAGAGGISLGLEDA----GYHPLALFEFDKHAVATLRLNRPLWNVVEGDIRQVD 348
Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83
D+L+ G PCQ +S G
Sbjct: 349 FTAYRSVGVDLLVGGPPCQGYSIDG 373
>gi|254456632|ref|ZP_05070061.1| modification methylase [Candidatus Pelagibacter sp. HTCC7211]
gi|207083634|gb|EDZ61060.1| modification methylase [Candidatus Pelagibacter sp. HTCC7211]
Length = 380
Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 14/93 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
+K DLF G GG+ ++ + + + T
Sbjct: 3 IKFIDLFSGCGGLTEAFLNNKKFSPIKII---DNDKFCYDTTIHRLKKLKFKNPEKIAQL 59
Query: 56 -----IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I D+++ G PCQ +S AG
Sbjct: 60 KDISSNKTINDFKNIKSDIVIGGPPCQAYSVAG 92
>gi|150396423|ref|YP_001326890.1| DNA-cytosine methyltransferase [Sinorhizobium medicae WSM419]
gi|150027938|gb|ABR60055.1| DNA-cytosine methyltransferase [Sinorhizobium medicae WSM419]
Length = 632
Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV---KTYQANFPNTLIFGDIAK 58
L + ++ G GG+ L LE+ E E + ++ + + ++
Sbjct: 280 LTVVEICAGAGGMSLGLERA----GFEHVALVEYDNHAAATLRRNRRDWTVIREDVRTMD 335
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + D++ G PCQP+S G
Sbjct: 336 FRLYRQLEIDLVSGGPPCQPYSSDG 360
>gi|157953073|ref|YP_001497965.1| hypothetical protein NY2A_B769R [Paramecium bursaria Chlorella
virus NY2A]
gi|155123300|gb|ABT15168.1| hypothetical protein NY2A_B769R [Paramecium bursaria Chlorella
virus NY2A]
Length = 362
Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV-ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
LK +LF GI GI L R E EIN + + FP+ +F D+ K
Sbjct: 3 LKALELFAGIAGITHGL------RGFVEPVAFVEINKDAQEFLSTKFPDKPVFDDVTKFS 56
Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83
+D D++ GFPC FS AG
Sbjct: 57 KRDFDEPIDMITGGFPCTGFSIAG 80
>gi|183602700|ref|ZP_02964064.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis HN019]
gi|219682526|ref|YP_002468909.1| modification methylase SinI [Bifidobacterium animalis subsp. lactis
AD011]
gi|241190098|ref|YP_002967492.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|241195504|ref|YP_002969059.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|183218118|gb|EDT88765.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis HN019]
gi|219620176|gb|ACL28333.1| modification methylase SinI [Bifidobacterium animalis subsp. lactis
AD011]
gi|240248490|gb|ACS45430.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|240250058|gb|ACS46997.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|295793085|gb|ADG32620.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis V9]
Length = 453
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
F G GG+ L E+ + E N T N P+ + GDI KI ++
Sbjct: 77 LSFFSGAGGLDLGFERA----GISAALYCENNRECRMTLHRNRPDVALLGDITKISADEV 132
Query: 65 PDH---------DVLLAGFPCQPFSQAG 83
DV+ G PCQ FS AG
Sbjct: 133 RRMARIPQGREIDVMFGGPPCQAFSTAG 160
>gi|220924842|ref|YP_002500144.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS
2060]
gi|219949449|gb|ACL59841.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS
2060]
Length = 361
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLFCG GG+ L + S +I+ + + + L D+A +
Sbjct: 5 VVDLFCGCGGLSLGARNA----GFKIGLSVDIDAVLTSSYKENHPGAHLRLMDVAALTGS 60
Query: 63 DI-----PDHDVLLAGFPCQPFSQAG 83
D+ D ++ G PCQ FS+ G
Sbjct: 61 DVRTVVGGRVDGIIGGPPCQGFSEIG 86
>gi|108797795|ref|YP_637992.1| DNA-cytosine methyltransferase [Mycobacterium sp. MCS]
gi|119866887|ref|YP_936839.1| DNA-cytosine methyltransferase [Mycobacterium sp. KMS]
gi|108768214|gb|ABG06936.1| DNA-cytosine methyltransferase [Mycobacterium sp. MCS]
gi|119692976|gb|ABL90049.1| DNA-cytosine methyltransferase [Mycobacterium sp. KMS]
Length = 385
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ LF GIGG+ + L ++ E EI+P + + P+ + D+ +++
Sbjct: 4 TVAGLFAGIGGLEVGLSRS----GWETTLLCEIDPAARAVLSHHMPDVELQDDVRRLRAL 59
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
D+L AGFPCQ SQAG
Sbjct: 60 -PQSLDLLAAGFPCQDLSQAG 79
>gi|86475982|dbj|BAE79156.1| putative cytosine methyltransferase [Clostridium perfringens]
Length = 339
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59
+K+ LF GIG +E + E E + Y+ Y F D+ +
Sbjct: 1 MKVLSLFSGIGAFERAIEN--KNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVNWV 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D D++ GFPC S AG
Sbjct: 59 NGTNFKDIDLVTYGFPCTDISLAG 82
>gi|9632084|ref|NP_048873.1| hypothetical protein PBCV1_A517L [Paramecium bursaria Chlorella
virus 1]
gi|1620188|gb|AAC96884.1| M.CviAII cytosine DNA methyltransferase [Paramecium bursaria
Chlorella virus 1]
Length = 344
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML+ DLF GIGGI L V E N + Q +P+ +F D+
Sbjct: 1 MLRALDLFSGIGGITYGLRGI-----VTPIAYVEKNEDARGFLQRKYPDVPVFDDVCTFD 55
Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83
+ D++ AG+PC FS AG
Sbjct: 56 AIEWKGKVDIITAGWPCTGFSTAG 79
>gi|291544225|emb|CBL17334.1| DNA-methyltransferase (dcm) [Ruminococcus sp. 18P13]
Length = 407
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 13/92 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-------- 52
+ +LF G GG+ L +E+ E++ + T + N P +
Sbjct: 73 IFSTIELFAGAGGLALGVEKA----GFNTLGLVEVDKDASDTLRKNRPEWRVINDDIANV 128
Query: 53 -FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ + + D+L G PCQ FS AG
Sbjct: 129 SCLDLQEYFGLKQGELDLLSGGAPCQSFSYAG 160
>gi|332796494|ref|YP_004457994.1| DNA-cytosine methyltransferase [Acidianus hospitalis W1]
gi|332694229|gb|AEE93696.1| DNA-cytosine methyltransferase [Acidianus hospitalis W1]
Length = 323
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
LK+ DLF G GG L ++ + +IN + + Y NFP+T++ DI +
Sbjct: 3 LKVVDLFSGAGGFSLGF----KNQGFNIALAIDINHAAARAYAQNFPSTVVLEEDIRNVT 58
Query: 61 TQDI-----PDHDVLLAGFPCQPFSQA 82
++I D+L+ PC+ F+ A
Sbjct: 59 GEEIIDILGSSPDILIGSPPCEGFTAA 85
>gi|303239111|ref|ZP_07325641.1| C-5 cytosine-specific DNA methylase [Acetivibrio cellulolyticus
CD2]
gi|302593449|gb|EFL63167.1| C-5 cytosine-specific DNA methylase [Acetivibrio cellulolyticus
CD2]
Length = 632
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF G GG L + ++SEI P+ ++ P +GDI KI
Sbjct: 5 LTLGSLFDGSGGFPLGA----LLNGIVPIWASEIEPFPIRVTTKRLPFVKHYGDIRKING 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+I D++ G PC S AG
Sbjct: 61 AEIEPVDIITFGSPCTDMSVAG 82
>gi|145356149|ref|XP_001422300.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582541|gb|ABP00617.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 778
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ LF GIGG+ L LE+ + E + + + + +P+ + D+A +
Sbjct: 3 LRVASLFSGIGGLDLGLERA----GHDVVLRVERDAHCRELLRRQYPDGALMDDVAAVMP 58
Query: 62 QDIPDHDVLLAGFPCQPFS 80
+D+ D+L AGFPC S
Sbjct: 59 RDLDGVDLLAAGFPCNDCS 77
>gi|168211060|ref|ZP_02636685.1| Dcm [Clostridium perfringens B str. ATCC 3626]
gi|170710923|gb|EDT23105.1| Dcm [Clostridium perfringens B str. ATCC 3626]
Length = 339
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59
+K+ LF GIG +E + E E + Y+ Y F D+ +
Sbjct: 1 MKVLSLFSGIGAFERAIEN--KNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVNWV 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D D++ GFPC S AG
Sbjct: 59 DGTHFKDIDLVTYGFPCTDISLAG 82
>gi|281491831|ref|YP_003353811.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp.
lactis KF147]
gi|281375542|gb|ADA65048.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp.
lactis KF147]
Length = 347
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
L + DLF G GG+ E + + + + + + + + GDI +
Sbjct: 5 LSVIDLFSGAGGLSYGFELA----GYDILLGIDNDFDALRTFEKNHKNSKTLEGDITQFT 60
Query: 61 T-------QDIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ S +G
Sbjct: 61 YEKDIKPLINDQKIDIIVGGPPCQGMSLSG 90
>gi|312902257|ref|ZP_07761465.1| helix-turn-helix protein [Enterococcus faecalis TX0635]
gi|283466064|emb|CBG92839.1| hypothetical protein [Enterococcus casseliflavus]
gi|310634316|gb|EFQ17599.1| helix-turn-helix protein [Enterococcus faecalis TX0635]
Length = 470
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 14/92 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKI- 59
+ + F G GG+ L LE+ EI+ + T + +I GDI I
Sbjct: 135 YTLVETFAGAGGLSLGLEKA----GFNSVADIEIDSTACSTLKLNRPNWNVIEGDINTIA 190
Query: 60 --------KTQDIPDHDVLLAGFPCQPFSQAG 83
+ + DVL G+PCQ FS AG
Sbjct: 191 QNGIFNHEQFTFRGELDVLSGGYPCQSFSYAG 222
>gi|186683285|ref|YP_001866481.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
gi|186465737|gb|ACC81538.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
Length = 419
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 17/92 (18%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---------- 54
LF G+GG L + E + + NP ++ TYQ NFP+ +
Sbjct: 12 VSLFSGVGGFDLGFKAA----GFEIAIAIDNNPIALATYQHNFPHATVLCKDIREVTGEE 67
Query: 55 ---DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + G PCQ FS AG
Sbjct: 68 IRACIQAKYGDWDGEIHTVFDGPPCQGFSVAG 99
>gi|160943738|ref|ZP_02090969.1| hypothetical protein FAEPRAM212_01233 [Faecalibacterium
prausnitzii M21/2]
gi|158444912|gb|EDP21915.1| hypothetical protein FAEPRAM212_01233 [Faecalibacterium
prausnitzii M21/2]
Length = 298
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L LF GIGGI L E E + +++P F DI +
Sbjct: 3 LTHFSLFSGIGGIDLAAEAA----GFTSVCQCEWAAFPAAVLASHWPEVPHFQDITTVTK 58
Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83
+ ++ GFPCQPFS AG
Sbjct: 59 EAFFEKTGLRTVTLISGGFPCQPFSTAG 86
>gi|157953266|ref|YP_001498157.1| hypothetical protein AR158_C075L [Paramecium bursaria Chlorella
virus AR158]
gi|156067914|gb|ABU43621.1| hypothetical protein AR158_C075L [Paramecium bursaria Chlorella
virus AR158]
Length = 343
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML+ DLF GIGG L + E + FP+ IF D+
Sbjct: 4 MLRSLDLFSGIGGNSYALRDIL-----KPIAYVEREQHLRDFLGRKFPDVPIFDDVVTFD 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
T+ + D D++ AGFPC FS AG
Sbjct: 59 TRSVKDIDIITAGFPCTGFSTAG 81
>gi|258515652|ref|YP_003191874.1| DNA-cytosine methyltransferase [Desulfotomaculum acetoxidans DSM
771]
gi|257779357|gb|ACV63251.1| DNA-cytosine methyltransferase [Desulfotomaculum acetoxidans DSM
771]
Length = 464
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 23/99 (23%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK------------TYQANFPNTL 51
DLF G GGI L L + FF+ E +P + + Y +
Sbjct: 37 YIDLFAGCGGISLGLMNA----GWQGFFAIEKSPMAFETLKYNLIDGNKVHYNWPKWLSK 92
Query: 52 IFGDIAKIKTQDI-------PDHDVLLAGFPCQPFSQAG 83
DI K + + D++ G PCQ +S AG
Sbjct: 93 EPHDICKFRVRFWRQLKTISGQIDLIAGGPPCQGYSFAG 131
>gi|168206682|ref|ZP_02632687.1| Dcm [Clostridium perfringens E str. JGS1987]
gi|190015777|ref|YP_001967782.1| probable site-specific DNA-methyltransferase [Clostridium
perfringens]
gi|86450199|gb|ABC96308.1| probable site-specific DNA-methyltransferase [Clostridium
perfringens]
gi|170661882|gb|EDT14565.1| Dcm [Clostridium perfringens E str. JGS1987]
Length = 339
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59
+K+ LF GIG +E + E E + Y+ Y F D+ +
Sbjct: 1 MKVLSLFSGIGAFERAIEN--KNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVNWV 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D D++ GFPC S AG
Sbjct: 59 DGTHFKDIDLVTYGFPCTDISLAG 82
>gi|332158207|ref|YP_004423486.1| modification methylase [Pyrococcus sp. NA2]
gi|331033670|gb|AEC51482.1| modification methylase [Pyrococcus sp. NA2]
Length = 310
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLF G GG L + + + E P + Q +I DI +
Sbjct: 12 VIDLFAGAGGFSLGFKLA----GFKIISAIENFKPKAKTYSQNFPEVNVIVSDIKLVNPL 67
Query: 63 DI-PDHDVLLAGFPCQPFS 80
D+ DV++ G PC+PF+
Sbjct: 68 DVADKVDVIIGGPPCEPFT 86
>gi|197301928|ref|ZP_03166992.1| hypothetical protein RUMLAC_00650 [Ruminococcus lactaris ATCC
29176]
gi|197298996|gb|EDY33532.1| hypothetical protein RUMLAC_00650 [Ruminococcus lactaris ATCC
29176]
Length = 134
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------ 54
M +LF G GG+ L +E+ + +E N + T + N PN +
Sbjct: 1 MFTTIELFAGAGGLALGIEKA----GFKTLALNEFNADACATLRKNRPNWNVIEGDVAEI 56
Query: 55 ---DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ + + + D+L G PCQ FS AG
Sbjct: 57 SGLDLEEYFSVRKGELDLLSGGAPCQAFSYAG 88
>gi|182625480|ref|ZP_02953252.1| Dcm [Clostridium perfringens D str. JGS1721]
gi|177909320|gb|EDT71778.1| Dcm [Clostridium perfringens D str. JGS1721]
Length = 339
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59
+K+ LF GIG +E + E E + Y+ Y F D+ +
Sbjct: 1 MKVLSLFSGIGAFERAIEN--KNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVNWV 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D D++ GFPC S AG
Sbjct: 59 DGTHFKDIDLVTYGFPCTDISLAG 82
>gi|304383753|ref|ZP_07366212.1| modification methylase HgiDII [Prevotella marshii DSM 16973]
gi|304335277|gb|EFM01548.1| modification methylase HgiDII [Prevotella marshii DSM 16973]
Length = 360
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 10/85 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ DLFCGIGG+ + + +I+ Y+ N I+ DI +
Sbjct: 14 IEVIDLFCGIGGLSFGM----KSKGFNILAGYDIDATCRYAYETNNNAKFIYKDIKTVSP 69
Query: 62 QDI------PDHDVLLAGFPCQPFS 80
+I VL PCQPFS
Sbjct: 70 DEIRTAYGKGSIRVLAGCAPCQPFS 94
>gi|290892537|ref|ZP_06555530.1| site-specific DNA-methyltransferase BsuRI [Listeria monocytogenes
FSL J2-071]
gi|290557846|gb|EFD91367.1| site-specific DNA-methyltransferase BsuRI [Listeria monocytogenes
FSL J2-071]
Length = 409
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 25/106 (23%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRN-------------------------VECFFSSEINP 37
+ LF G GG+ L LE + +S+++
Sbjct: 57 NVVSLFSGAGGLDLGLELAGVYAKKEQKEQPLELLNNYPRYKEIRKESLFNIIYSNDMFK 116
Query: 38 YSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +TY ANF + ++ ++ K + P ++++ GFPC FS AG
Sbjct: 117 EANETYLANFQSNILKQELDIRKIPNFPKCELMIGGFPCPGFSAAG 162
>gi|217965593|ref|YP_002351271.1| modification methylase (cytosine-specific methyltransferase)
[Listeria monocytogenes HCC23]
gi|217334863|gb|ACK40657.1| modification methylase (cytosine-specific methyltransferase)
[Listeria monocytogenes HCC23]
gi|307569856|emb|CAR83035.1| methyltransferase [Listeria monocytogenes L99]
Length = 411
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 25/106 (23%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRN-------------------------VECFFSSEINP 37
+ LF G GG+ L LE + +S+++
Sbjct: 57 NVVSLFSGAGGLDLGLELAGVYAKKEQKEQPLELLNNYPRYKEIRKESLFNIIYSNDMFK 116
Query: 38 YSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +TY ANF + ++ ++ K + P ++++ GFPC FS AG
Sbjct: 117 EANETYLANFQSNILKQELDIRKIPNFPKCELMIGGFPCPGFSAAG 162
>gi|309790027|ref|ZP_07684601.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6]
gi|308227882|gb|EFO81536.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6]
Length = 438
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
DLFCG GG+ L E N + P +V T++ NF + I DI +I
Sbjct: 60 LDLFCGAGGMSLGFE----SGNFFVAAGIDAEPAAVMTHKYNFLSKGIACDIREISDPRE 115
Query: 65 -------PDHDVLLAGFPCQPFSQAG 83
P DV++ G PCQ F++ G
Sbjct: 116 LLATLGLPRVDVIIGGPPCQGFARIG 141
>gi|170063953|ref|XP_001867327.1| DNA (cytosine-5)-methyltransferase [Culex quinquefasciatus]
gi|167881402|gb|EDS44785.1| DNA (cytosine-5)-methyltransferase [Culex quinquefasciatus]
Length = 345
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60
++ +LF GIGG+ + + + EINP + Y NF P +I +
Sbjct: 16 YRVLELFSGIGGMHYAIRRAGKP--FRVVAAMEINPVANTIYNHNFGPGAATNSNILSLT 73
Query: 61 T--QDIPDHDVLLAGFPCQPFSQAG 83
D +V+L PCQPF++ G
Sbjct: 74 PERIDQLGANVILMSPPCQPFTRNG 98
>gi|23097628|ref|NP_691094.1| site-specific DNA-methyltransferase [Oceanobacillus iheyensis
HTE831]
gi|22775851|dbj|BAC12129.1| site-specific DNA-methyltransferase (cytosine-specific)
[Oceanobacillus iheyensis HTE831]
Length = 596
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 19/97 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------- 50
K+ DLF G GG+ QT E + EIN + KTY N
Sbjct: 12 YKLIDLFAGAGGLSNGFIQTGK---FEVLGAVEINKSAAKTYVENHNKNEDLIIKSGNSG 68
Query: 51 -----LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
I ++ + D V++ G PCQ FS A
Sbjct: 69 MSDVSKIDFANFILEKKTSGDEIVVIGGPPCQGFSNA 105
>gi|282899425|ref|ZP_06307392.1| DNA-cytosine methyltransferase [Cylindrospermopsis raciborskii
CS-505]
gi|281195689|gb|EFA70619.1| DNA-cytosine methyltransferase [Cylindrospermopsis raciborskii
CS-505]
Length = 384
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60
L +LF G GG+ LE ++ E++ + T N+ + + D+ K K
Sbjct: 6 LSCLELFAGAGGLAKGLEMA----KIKHKALIELDYNACLTLANNYNHQLIYNVDVRKFK 61
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+++ + D++ G PCQPFS G
Sbjct: 62 FEEVGEVDIIAGGPPCQPFSLGG 84
>gi|300781468|ref|ZP_07091322.1| DNA (cytosine-5-)-methyltransferase [Corynebacterium genitalium
ATCC 33030]
gi|300533175|gb|EFK54236.1| DNA (cytosine-5-)-methyltransferase [Corynebacterium genitalium
ATCC 33030]
Length = 347
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 12/89 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLF G GG+ L + + + +++TY +NF + D+A
Sbjct: 30 RVVDLFSGCGGLSLGFQAA----GFDVLAGFDHWEPAIETYNSNFGHHAEMLDLANFDKS 85
Query: 63 DIPDHDV--------LLAGFPCQPFSQAG 83
+ ++ G PCQ FS AG
Sbjct: 86 AGRLGEFSALSEFPAIIGGPPCQDFSTAG 114
>gi|209809294|ref|YP_002264832.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio
salmonicida LFI1238]
gi|208010856|emb|CAQ81257.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio
salmonicida LFI1238]
Length = 387
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 33/93 (35%), Gaps = 18/93 (19%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------FGDI 56
K DLF G GG L VE + E + + TY+ NF DI
Sbjct: 4 KAIDLFAGAGGFTLSAHNA----GVEVVAAIEFDKAAANTYKKNFILKDKKPIKLLNEDI 59
Query: 57 AKIKTQ--------DIPDHDVLLAGFPCQPFSQ 81
+ + D++L G PCQ FS
Sbjct: 60 NLVDPTGLRESLNLKAGELDLILGGPPCQGFST 92
>gi|313668596|ref|YP_004048880.1| DNA cytosine methyltransferase [Neisseria lactamica ST-640]
gi|313006058|emb|CBN87519.1| DNA cytosine methyltransferase [Neisseria lactamica 020-06]
Length = 393
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
+K ++F G GG+ LE + E+N + + P + GD+A
Sbjct: 1 MKSLEIFSGAGGLAKGLELA----GFQHASFIELNKDACNSLRSNFNPKLVYQGDVADFD 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+V+ G PCQPFS G
Sbjct: 57 LSSQEGIEVIAGGPPCQPFSLGG 79
>gi|309380076|emb|CBX21487.1| putative DNA cytosine methyltransferase [Neisseria lactamica
Y92-1009]
Length = 377
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
+K ++F G GG+ LE + E+N + + P + GD+A
Sbjct: 1 MKSLEIFSGAGGLAKGLELA----GFQHASFIELNKDACNSLRSNFNPKLVYQGDVADFD 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+V+ G PCQPFS G
Sbjct: 57 LSSQEGIEVIAGGPPCQPFSLGG 79
>gi|289177801|gb|ADC85047.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis BB-12]
Length = 513
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
F G GG+ L E+ + E N T N P+ + GDI KI ++
Sbjct: 137 LSFFSGAGGLDLGFERA----GISAALYCENNRECRMTLHRNRPDVALLGDITKISADEV 192
Query: 65 PDH---------DVLLAGFPCQPFSQAG 83
DV+ G PCQ FS AG
Sbjct: 193 RRMARIPQGREIDVMFGGPPCQAFSTAG 220
>gi|59801568|ref|YP_208280.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae
FA 1090]
gi|194097887|ref|YP_002000932.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae
NCCP11945]
gi|239998362|ref|ZP_04718286.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae
35/02]
gi|240113683|ref|ZP_04728173.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae
MS11]
gi|240116425|ref|ZP_04730487.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae
PID18]
gi|240117164|ref|ZP_04731226.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae
PID1]
gi|240125114|ref|ZP_04738000.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae
SK-92-679]
gi|254494438|ref|ZP_05107609.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae
1291]
gi|260441646|ref|ZP_05795462.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae
DGI2]
gi|268594223|ref|ZP_06128390.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae
35/02]
gi|268599750|ref|ZP_06133917.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae
MS11]
gi|268602094|ref|ZP_06136261.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae
PID18]
gi|268602852|ref|ZP_06137019.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae
PID1]
gi|268683710|ref|ZP_06150572.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae
SK-92-679]
gi|291045024|ref|ZP_06570732.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae
DGI2]
gi|10444408|gb|AAG17898.1|AF297971_2 DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae]
gi|59718463|gb|AAW89868.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae
FA 1090]
gi|193933177|gb|ACF29001.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae
NCCP11945]
gi|226513478|gb|EEH62823.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae
1291]
gi|268547612|gb|EEZ43030.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae
35/02]
gi|268583881|gb|EEZ48557.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae
MS11]
gi|268586225|gb|EEZ50901.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae
PID18]
gi|268586983|gb|EEZ51659.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae
PID1]
gi|268623994|gb|EEZ56394.1| plasmid encoded methyltransferase Pem [Neisseria gonorrhoeae
SK-92-679]
gi|291011027|gb|EFE03024.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae
DGI2]
gi|317163651|gb|ADV07192.1| DNA cytosine methyltransferase M.NgoMIII [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 377
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
+K ++F G GG+ LE + E+N + + P + GD+A
Sbjct: 1 MKSLEIFSGAGGLAKGLELA----GFQHASFIELNKDACNSLRSNFNPKLVYQGDVADFD 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+V+ G PCQPFS G
Sbjct: 57 LSSQEGIEVIAGGPPCQPFSLGG 79
>gi|328782909|ref|XP_393991.3| PREDICTED: tRNA (cytosine-5-)-methyltransferase [Apis mellifera]
Length = 360
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI 59
M+++ +L+ GIGG+ L+++ + + +IN + Y+ NFPN L+ +I +
Sbjct: 1 MMRVLELYSGIGGMHYALQESG--IKGDIVAAVDINTVANSIYKYNFPNVLLLNCNIQSL 58
Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83
Q+I + D +L PCQP+++ G
Sbjct: 59 SAQEINNLNIDTILMSPPCQPYTRIG 84
>gi|169342462|ref|ZP_02863522.1| Dcm [Clostridium perfringens C str. JGS1495]
gi|169299461|gb|EDS81526.1| Dcm [Clostridium perfringens C str. JGS1495]
Length = 339
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59
+KI LF GIG +E + E E + Y+ Y F D+ +
Sbjct: 1 MKILSLFSGIGAFERAIEN--KNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVNWV 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D D++ GFPC S AG
Sbjct: 59 DGTHFKDIDLITYGFPCTDISLAG 82
>gi|270015149|gb|EFA11597.1| DNA methyltransferase 1 [Tribolium castaneum]
Length = 1882
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK D+F G GG+ ++ E + ++ T++ N +F D +
Sbjct: 753 LKCLDVFAGCGGLSQGFHAAGVA---NTKWAIENDKPALDTFRHNNRTCHVFRDDCNVLL 809
Query: 62 QDIP----------DHDVLLAGFPCQPFS 80
+++ + ++++ G PCQ FS
Sbjct: 810 RNVMSGKGGLPPKSEVEMIVGGPPCQGFS 838
>gi|167897069|ref|ZP_02484471.1| modification methylase (cytosine-specific DNA methylase)
[Burkholderia pseudomallei 7894]
Length = 349
Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 13/88 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
DLFCG GG+ + L++ E NP + +TY+ N + DI +
Sbjct: 6 YTAIDLFCGAGGLTVGLKKA----GFRVLAGIENNPIAAETYKLNNRAAKIYQDDIRMLC 61
Query: 61 TQ--------DIPDHDVLLAGFPCQPFS 80
+ D+L PCQ FS
Sbjct: 62 PTTVMQELGLKRGELDLLAGCPPCQGFS 89
>gi|312114242|ref|YP_004011838.1| DNA-cytosine methyltransferase [Rhodomicrobium vannielii ATCC
17100]
gi|311219371|gb|ADP70739.1| DNA-cytosine methyltransferase [Rhodomicrobium vannielii ATCC
17100]
Length = 363
Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLFCG GG+ + + + ++ N I D+A++K +
Sbjct: 23 TVVDLFCGAGGLSHGFH----SEGFDIVAGIDTDETCRYAFEHNNDAPFIRRDVAQLKGR 78
Query: 63 D------IPDHDVLLAGFPCQPFSQ 81
+ H VL+ PCQPFS
Sbjct: 79 EIEDLFVPGRHRVLVGCAPCQPFST 103
>gi|309783383|ref|ZP_07678091.1| C-5 cytosine-specific DNA methylase family protein [Ralstonia sp.
5_7_47FAA]
gi|330827391|ref|YP_004390629.1| C-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans
K601]
gi|308917844|gb|EFP63533.1| C-5 cytosine-specific DNA methylase family protein [Ralstonia sp.
5_7_47FAA]
gi|329312699|gb|AEB87113.1| C-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans
K601]
Length = 304
Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
++ DLF G GG +++ P + + D+ +
Sbjct: 1 MRCIDLFAGAGGFTEGARLA----GARVVWAANHWPLAVQYHQTNHPDTWHECQDLQQAD 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
+ +P HDV+LA CQ S+A
Sbjct: 57 WRAVPAHDVVLASPACQGHSRA 78
>gi|121582518|ref|YP_974050.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42]
gi|120608576|gb|ABM44315.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42]
Length = 304
Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
++ DLF G GG +++ P + + D+ +
Sbjct: 1 MRCIDLFAGAGGFTEGARLA----GARVVWAANHWPLAVQYHQTNHPDTWHECQDLQQAD 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
+ +P HDV+LA CQ S+A
Sbjct: 57 WRAVPAHDVVLASPACQGHSRA 78
>gi|330900978|gb|EGH32397.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 340
Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 13/89 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
DLF G GG+ L+ E + EI+ + KT+ N + + DI ++
Sbjct: 5 FTAIDLFSGCGGLTQGLKDA----GYEVKGAVEIDSKARKTFTMNHADVPLVGEDIRQLS 60
Query: 61 TQDIPDH--------DVLLAGFPCQPFSQ 81
+ + D+L PCQ FS
Sbjct: 61 AETLMRESGLAIEELDLLAGCPPCQGFST 89
>gi|325286536|ref|YP_004262326.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489]
gi|324321990|gb|ADY29455.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489]
Length = 414
Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 15/93 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L DLFCG GG+ E + + TY+ NF + I GDI +
Sbjct: 96 LTSADLFCGAGGMAKGFEMA----GFTQVGGLDWFKEAGMTYRENFEHPHILGDITERSV 151
Query: 62 QDI-----------PDHDVLLAGFPCQPFSQAG 83
+D VL GFPCQ FS +G
Sbjct: 152 KDKFINTVKSSLNGKPLTVLSGGFPCQGFSMSG 184
>gi|170680813|ref|YP_001746263.1| DNA-cytosine methyltransferase family protein [Escherichia coli
SMS-3-5]
gi|307315390|ref|ZP_07594959.1| DNA-cytosine methyltransferase [Escherichia coli W]
gi|33413740|gb|AAN28260.1| Mth [Enterobacteria phage WPhi]
gi|170518531|gb|ACB16709.1| DNA-cytosine methyltransferase family protein [Escherichia coli
SMS-3-5]
gi|306905264|gb|EFN35809.1| DNA-cytosine methyltransferase [Escherichia coli W]
gi|315063217|gb|ADT77544.1| DNA cytosine methylase [Escherichia coli W]
gi|323380718|gb|ADX52986.1| DNA-cytosine methyltransferase [Escherichia coli KO11]
Length = 312
Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
M + LF G GG + +++I PY+ Y N P T GDI+ +
Sbjct: 1 MPTVVSLFSGCGGSDAGVLNA----GFNVLMANDILPYARDVYLENHPETDYILGDISGL 56
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
++ P ++L+ +PCQ FSQ G
Sbjct: 57 QSF--PSAELLIGCYPCQGFSQGG 78
>gi|119382891|ref|YP_913947.1| transposase IS116/IS110/IS902 family protein [Paracoccus
denitrificans PD1222]
gi|119372658|gb|ABL68251.1| transposase IS116/IS110/IS902 family protein [Paracoccus
denitrificans PD1222]
Length = 539
Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGI-GGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
L + DLF G GG L L + + EI + Y NFP+ ++ DI +
Sbjct: 12 LHVLDLFSGAAGGWSLGLHRA----GFMTIAACEIVEWRRILYSENFPHVRLYADIRDLT 67
Query: 61 TQD-----IPDHDVLLAGFPCQPFSQA 82
D+++ PCQ S A
Sbjct: 68 ATRLVSDLGCLPDIVVGSPPCQDISSA 94
>gi|239624264|ref|ZP_04667295.1| DNA-cytosine methyltransferase [Clostridiales bacterium 1_7_47_FAA]
gi|239520650|gb|EEQ60516.1| DNA-cytosine methyltransferase [Clostridiales bacterium 1_7_47FAA]
Length = 470
Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + ++SE+ P ++ + + P + GDI K+
Sbjct: 40 ITLGTLFDGIGGFP----YAALFYGIRPVWASEVLPTAISVTKRHIPEMVHVGDITKLDG 95
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ +P D++ G PCQ S +G
Sbjct: 96 RKLPPVDIITFGSPCQGLSISG 117
>gi|283834911|ref|ZP_06354652.1| C-5 cytosine-specific DNA methylase family protein [Citrobacter
youngae ATCC 29220]
gi|291069174|gb|EFE07283.1| C-5 cytosine-specific DNA methylase family protein [Citrobacter
youngae ATCC 29220]
Length = 400
Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 18/93 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF------GD 55
+K DLF G GG L ++ + E++ + TY+ N D
Sbjct: 14 IKAIDLFSGAGGFSL----AALELGIDVLSAIELDKDACDTYRDNLIRKRENNIKLLNQD 69
Query: 56 IAKIKTQDIPDH--------DVLLAGFPCQPFS 80
I I + + D+++ G PCQ FS
Sbjct: 70 IMSISPMSMMEDLFLLEGELDIIIGGPPCQGFS 102
>gi|41584550|gb|AAS09913.1| BsmBI M1-M2 methyltransferase fusion protein [Geobacillus
stearothermophilus]
Length = 1068
Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 17/94 (18%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------------PNT 50
DLF G GG+ E +E + EI+ + +TY N
Sbjct: 793 TFVDLFAGAGGLSYGFELA----GLEGMAALEIDKDAAETYAKNHSSNIDVIVGDIRSPE 848
Query: 51 LIFGDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83
+ I +K + D++ G PCQ FS AG
Sbjct: 849 IQNQLIESVKNKLKGRTLDLIAGGLPCQGFSTAG 882
>gi|294635767|ref|ZP_06714227.1| C-5 cytosine-specific DNA methylase family protein [Edwardsiella
tarda ATCC 23685]
gi|291090867|gb|EFE23428.1| C-5 cytosine-specific DNA methylase family protein [Edwardsiella
tarda ATCC 23685]
Length = 403
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 34/93 (36%), Gaps = 18/93 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--------------NF 47
+K DLF G GG L ++ + E++ + TY
Sbjct: 1 MKAIDLFAGAGGFSL----AAFEVGIDVQAAIELDKQASDTYYHNLVEKLGAQTQVFSQD 56
Query: 48 PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
N + G + K + D+LL G PCQ FS
Sbjct: 57 INDVDIGSMMKFQGIKQGQLDILLGGPPCQGFS 89
>gi|169826094|ref|YP_001696252.1| modification methylase BsuRI [Lysinibacillus sphaericus C3-41]
gi|168990582|gb|ACA38122.1| Modification methylase BsuRI [Lysinibacillus sphaericus C3-41]
Length = 426
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINP 37
+ LF G GG+ L E + +++++
Sbjct: 59 YNVVGLFSGCGGLDLGFELAGLIAEIGEENAMTAFKNKEKFDEIRHKSVFNTIYTNDMFK 118
Query: 38 YSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +TY+ NFP+ +I + K + P +++L GFPC FS+AG
Sbjct: 119 EANETYKLNFPDHIIQHEKDIRKVANFPMCNLMLGGFPCPGFSEAG 164
>gi|332970699|gb|EGK09680.1| modification methylase HphIA [Kingella kingae ATCC 23330]
Length = 149
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 11/88 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLFCG GG+ L Q + + ++KTY A NT T
Sbjct: 6 TVLDLFCGCGGLSLGFIQA----GFDVKLGIDAWQDAIKTYTATHQNTQGIVADLFTTTP 61
Query: 63 DI-------PDHDVLLAGFPCQPFSQAG 83
+ DV++ G PCQ FS AG
Sbjct: 62 EQISQQTQINQIDVIIGGPPCQGFSIAG 89
>gi|114570713|ref|YP_757393.1| DNA (cytosine-5-)-methyltransferase [Maricaulis maris MCS10]
gi|114341175|gb|ABI66455.1| DNA (cytosine-5-)-methyltransferase [Maricaulis maris MCS10]
Length = 375
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 29/89 (32%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFG 54
+ I DLFCG GG+ L + +++ Y+ NF
Sbjct: 1 MNIVDLFCGCGGLSLGAHYA----GFNTALAVDVDNDLRSAYRRNFGVGNAEKLDLAKTK 56
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++ G PCQ FS G
Sbjct: 57 AATLKRKSGPERPVGVIGGPPCQGFSVMG 85
>gi|167644366|ref|YP_001682029.1| DNA-cytosine methyltransferase [Caulobacter sp. K31]
gi|167644566|ref|YP_001682229.1| DNA-cytosine methyltransferase [Caulobacter sp. K31]
gi|167346796|gb|ABZ69531.1| DNA-cytosine methyltransferase [Caulobacter sp. K31]
gi|167346996|gb|ABZ69731.1| DNA-cytosine methyltransferase [Caulobacter sp. K31]
Length = 440
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 10/84 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLF G GG+ Q S+ +P ++ TY NFP +
Sbjct: 10 VVDLFAGAGGLSEGFRQA----GFSIIAGSDNDPDALATYATNFPEARSIWGDVRTPEVK 65
Query: 64 IPDHD------VLLAGFPCQPFSQ 81
D +++ G PCQ FSQ
Sbjct: 66 AQILDAARSASIIVGGPPCQAFSQ 89
>gi|269119458|ref|YP_003307635.1| DNA-cytosine methyltransferase [Sebaldella termitidis ATCC 33386]
gi|268613336|gb|ACZ07704.1| DNA-cytosine methyltransferase [Sebaldella termitidis ATCC 33386]
Length = 383
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M ++ + F GI L+ E + EI+ ++++ + N GDI+K+
Sbjct: 1 MPRVVEAFSGIRSQTQALKNLGID--HEVVATFEIDKWAIEMAKLLHGNVNNLGDISKVD 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+++P+HD+ FPCQ S AG
Sbjct: 59 PKEVPEHDLFTYTFPCQDISTAG 81
>gi|168206039|ref|ZP_02632044.1| Dcm [Clostridium perfringens E str. JGS1987]
gi|170662518|gb|EDT15201.1| Dcm [Clostridium perfringens E str. JGS1987]
Length = 339
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59
+K+ LF GIG +E + E E + Y+ Y F D+ +
Sbjct: 1 MKVLSLFSGIGAFERAIEN--KNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVNCV 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D D++ GFPC S AG
Sbjct: 59 DGTHFKDIDLVTYGFPCTDISLAG 82
>gi|18313899|ref|NP_560566.1| C-5 cytosine-specific DNA methylase [Pyrobaculum aerophilum str.
IM2]
gi|18161467|gb|AAL64748.1| C-5 cytosine-specific DNA methylase [Pyrobaculum aerophilum str.
IM2]
Length = 463
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 18/95 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------- 50
++ LF G GG+ L + + + F++++N Y+ TY NF
Sbjct: 4 FRVVSLFSGAGGLDLGFKMSGM---YQIIFANDVNLYATTTYAKNFEMKLLKCGGLTEAE 60
Query: 51 ----LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
L + + + DV++ G PCQ FS
Sbjct: 61 PNVVLSCDVEKVLFSPLAGEADVVVGGPPCQDFSI 95
>gi|302348094|ref|YP_003815732.1| Cytosine-specific DNA methylase [Acidilobus saccharovorans
345-15]
gi|302328506|gb|ADL18701.1| Cytosine-specific DNA methylase [Acidilobus saccharovorans
345-15]
Length = 327
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 13/85 (15%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---------IFGD 55
DLF G GG E + E +P KTY+ANFP T
Sbjct: 3 IDLFSGAGGFSRGFELA----GFNVVAAVENDPPVAKTYKANFPETYLIADDIKDVSEPT 58
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFS 80
I + D DV++A PC+PF+
Sbjct: 59 IKDVSGYGRGDVDVVIASPPCEPFT 83
>gi|281420885|ref|ZP_06251884.1| modification methylase DdeI [Prevotella copri DSM 18205]
gi|281405177|gb|EFB35857.1| modification methylase DdeI [Prevotella copri DSM 18205]
Length = 624
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 14/96 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-VECFFSSEINPYSVKTYQANFPNT------LIFG 54
+ DLF G GG Q + +S+IN T++ + +
Sbjct: 14 ITYLDLFAGAGGFSEGFMQAYTDDKYYNFRLASDINENCELTHRVRYNKMLGLDTKFMCQ 73
Query: 55 DI-------AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI +K + DV+ G CQ FS AG
Sbjct: 74 DIMEDSFLPNLLKEIGNQEIDVVTGGPSCQSFSLAG 109
>gi|157953001|ref|YP_001497893.1| hypothetical protein NY2A_B697R [Paramecium bursaria Chlorella
virus NY2A]
gi|155123228|gb|ABT15096.1| hypothetical protein NY2A_B697R [Paramecium bursaria Chlorella
virus NY2A]
Length = 369
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L+ DLF GIGGI L + VE E N + + P +F D+
Sbjct: 2 VLRALDLFSGIGGITHGLREI-----VEPIAFVEKNDEARSFLKKKHPEIPVFDDVCSFD 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D++LAG+PC FS AG
Sbjct: 57 ATKWTHVDIILAGWPCTGFSNAG 79
>gi|323475189|gb|ADX85795.1| DNA-cytosine methyltransferase [Sulfolobus islandicus REY15A]
gi|323477921|gb|ADX83159.1| DNA-cytosine methyltransferase [Sulfolobus islandicus HVE10/4]
Length = 325
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
+K+ DLF G GG L +E + +IN + +TY +I DI +I
Sbjct: 4 IKVIDLFSGAGGFSLGF----KKLGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQIS 59
Query: 61 TQDI-----PDHDVLLAGFPCQPFSQA 82
++I + DV++ G PC+ ++ A
Sbjct: 60 GKEILKNVGDEIDVIIGGPPCEGYTAA 86
>gi|229585366|ref|YP_002843868.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.27]
gi|228020416|gb|ACP55823.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.27]
Length = 325
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
+K+ DLF G GG L +E + +IN + +TY +I DI +I
Sbjct: 4 IKVIDLFSGAGGFSLGF----KKLGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQIS 59
Query: 61 TQDI-----PDHDVLLAGFPCQPFSQA 82
++I + DV++ G PC+ ++ A
Sbjct: 60 GKEILKNVGDEIDVIIGGPPCEGYTAA 86
>gi|229579730|ref|YP_002838129.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.G.57.14]
gi|228010445|gb|ACP46207.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.G.57.14]
Length = 325
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
+K+ DLF G GG L +E + +IN + +TY +I DI +I
Sbjct: 4 IKVIDLFSGAGGFSLGF----KKLGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQIS 59
Query: 61 TQDI-----PDHDVLLAGFPCQPFSQA 82
++I + DV++ G PC+ ++ A
Sbjct: 60 GKEILKNVGDEIDVIIGGPPCEGYTAA 86
>gi|227828127|ref|YP_002829907.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.14.25]
gi|227830834|ref|YP_002832614.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.S.2.15]
gi|229581602|ref|YP_002840001.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.N.15.51]
gi|238620327|ref|YP_002915153.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.4]
gi|284998349|ref|YP_003420117.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.D.8.5]
gi|227457282|gb|ACP35969.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.S.2.15]
gi|227459923|gb|ACP38609.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.14.25]
gi|228012318|gb|ACP48079.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.N.15.51]
gi|238381397|gb|ACR42485.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.4]
gi|284446245|gb|ADB87747.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.D.8.5]
Length = 325
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
+K+ DLF G GG L +E + +IN + +TY +I DI +I
Sbjct: 4 IKVIDLFSGAGGFSLGF----KKLGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQIS 59
Query: 61 TQDI-----PDHDVLLAGFPCQPFSQA 82
++I + DV++ G PC+ ++ A
Sbjct: 60 GKEILKNVGDEIDVIIGGPPCEGYTAA 86
>gi|319778406|ref|YP_004129319.1| DNA (cytosine-5-)-methyltransferase [Taylorella equigenitalis
MCE9]
gi|317108430|gb|ADU91176.1| DNA (cytosine-5-)-methyltransferase [Taylorella equigenitalis
MCE9]
Length = 160
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIP 65
+F GIG IRL EQ F + ++ + SEI+ +VKTY +NF + I GD+ K DIP
Sbjct: 1 MFAGIGCIRLGFEQAFGN-KLKTVYVSEIDSNAVKTYTSNFSSNKLIHGDVTKEVESDIP 59
Query: 66 DHDVLLAGFPCQPFSQAG 83
HD LLAGFPC FS AG
Sbjct: 60 PHDFLLAGFPCHAFSAAG 77
>gi|312133558|ref|YP_004000897.1| dcm2 [Bifidobacterium longum subsp. longum BBMN68]
gi|311772809|gb|ADQ02297.1| Dcm2 [Bifidobacterium longum subsp. longum BBMN68]
Length = 429
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 23/104 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN---------VECFFSSEINPYSVKTYQANFPNTLI 52
++I +LF G+GG RL L+ + ++++ P ++ Q +
Sbjct: 5 IRIAELFAGVGGFRLGLDGYGKKGDAFYMEPAGPFHTVWANQWEPTGQESKQFAWRCYEK 64
Query: 53 FGDIAKIKTQDI--------------PDHDVLLAGFPCQPFSQA 82
+DI P+ D+L+ GFPCQ +S A
Sbjct: 65 RFGEGSCVNEDIAKVLDEVDAGTRTIPEFDMLVGGFPCQDYSVA 108
>gi|331085772|ref|ZP_08334855.1| hypothetical protein HMPREF0987_01158 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406695|gb|EGG86200.1| hypothetical protein HMPREF0987_01158 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 411
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 34/112 (30%), Gaps = 33/112 (29%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
+K DLF G GG+ EQ+ + + E K + + + D
Sbjct: 6 IKSIDLFAGCGGLMDGFEQSGY---YDTVAAVEWEKAPCKNLENRLKSKWEYKDAEQRVL 62
Query: 58 -------------KIKTQDIPDH-------------DVLLAGFPCQPFSQAG 83
+ D DV++ G PCQ +S AG
Sbjct: 63 RFDIQRTEELFSGWVNDPDYGSSVGLDKLINNVGGIDVIIGGPPCQAYSIAG 114
>gi|317488614|ref|ZP_07947157.1| C-5 cytosine-specific DNA methylase [Eggerthella sp. 1_3_56FAA]
gi|316912266|gb|EFV33832.1| C-5 cytosine-specific DNA methylase [Eggerthella sp. 1_3_56FAA]
Length = 308
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ-- 62
DLFCG GG+ E + ++ TY AN P+ D+ +
Sbjct: 10 IDLFCGCGGLTAGFRAA----GFENLVGFDNWQAALDTYSANNPDQGEMLDLGDLSASLE 65
Query: 63 ---DIPDHDVLLAGFPCQPFSQAG 83
+ D ++ G PCQ FS AG
Sbjct: 66 RLAEYKGIDGVIGGPPCQDFSSAG 89
>gi|257440558|ref|ZP_05616313.1| type II DNA modification methyltransferase [Faecalibacterium
prausnitzii A2-165]
gi|257196997|gb|EEU95281.1| type II DNA modification methyltransferase [Faecalibacterium
prausnitzii A2-165]
Length = 297
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L LF GIGGI L E E + +++P F DI +
Sbjct: 3 LTHFSLFSGIGGIDLAAEAA----GFTSVCQCEWAAFPAAVLASHWPEVPRFQDITTVTK 58
Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83
+ ++ GFPCQPFS AG
Sbjct: 59 EAFFEKTGLRTVTLISGGFPCQPFSTAG 86
>gi|160934346|ref|ZP_02081733.1| hypothetical protein CLOLEP_03217 [Clostridium leptum DSM 753]
gi|156867019|gb|EDO60391.1| hypothetical protein CLOLEP_03217 [Clostridium leptum DSM 753]
Length = 433
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52
+LF G GG+ L +E+ + E + + T + N PN +
Sbjct: 101 FSTIELFAGAGGLALGIEEA----GFDTIGLIEFDKAASDTLKCNRPNWRVINDDIANIS 156
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ + + D+L G PCQ FS AG
Sbjct: 157 CLDLEEYFNIKKGELDLLSGGAPCQAFSYAG 187
>gi|332655271|ref|ZP_08421011.1| putative type II DNA modification methyltransferase
[Ruminococcaceae bacterium D16]
gi|332515776|gb|EGJ45386.1| putative type II DNA modification methyltransferase
[Ruminococcaceae bacterium D16]
Length = 298
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L LF GIGGI L E E + +++P F DI +
Sbjct: 3 LTHFSLFSGIGGIDLAAEAA----GFTSVCQCEWAAFPAAVLASHWPEVPRFQDITTVTK 58
Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83
+ ++ GFPCQPFS AG
Sbjct: 59 EAFFEKTGLRTVTLISGGFPCQPFSTAG 86
>gi|268611949|ref|ZP_06145676.1| DNA-cytosine methyltransferase [Ruminococcus flavefaciens FD-1]
Length = 352
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GI L L++ VEC+ + EI+ Y+V + NFP + G++
Sbjct: 1 MKVLSLFDGISCGMLALQRAGIP--VECYDAFEIDKYAVTVSKRNFPVIVHHGNVYDGDF 58
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
+D+LL G PC +S A
Sbjct: 59 TQFRGYDLLLGGSPCTYWSIA 79
>gi|322796386|gb|EFZ18927.1| hypothetical protein SINV_80475 [Solenopsis invicta]
Length = 354
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59
++++ +L+ GIGG+ L ++ + + +INP + Y NFP T+ I +I I
Sbjct: 8 IMRVMELYSGIGGMHYALCESGIAA--KVVTAIDINPIANDVYHHNFPETVLINRNIQSI 65
Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83
Q++ + D++L PCQPF++ G
Sbjct: 66 NAQELNKLNIDIILMSPPCQPFTRLG 91
>gi|94968156|ref|YP_590204.1| DNA-cytosine methyltransferase [Candidatus Koribacter versatilis
Ellin345]
gi|94550206|gb|ABF40130.1| DNA-cytosine methyltransferase [Candidatus Koribacter versatilis
Ellin345]
Length = 359
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIKTQD 63
+L G GG L LEQ + EIN ++ +T + ++ GD+
Sbjct: 46 LELCAGAGGQALGLEQA----GINHVALVEINKHACETLRLNRPNWKVVEGDLQTFDPSP 101
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
D++ AG PC PFS AG
Sbjct: 102 YKGADIVSAGLPCPPFSVAG 121
>gi|217032692|ref|ZP_03438178.1| hypothetical protein HPB128_202g26 [Helicobacter pylori B128]
gi|216945622|gb|EEC24273.1| hypothetical protein HPB128_202g26 [Helicobacter pylori B128]
Length = 211
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
D GIGG RL LEQ +++C +EIN +++TY+ F +T FGD+ +I D+P
Sbjct: 2 DFCSGIGGGRLGLEQ----CHLKCVGHAEINHEALRTYELFFKDTHNFGDLMRINPNDLP 57
Query: 66 DHDVLLAGFPCQPFSQAG 83
D D+L++GFPCQ FS G
Sbjct: 58 DFDMLVSGFPCQAFSING 75
>gi|70606458|ref|YP_255328.1| site-specific DNA methylase [Sulfolobus acidocaldarius DSM 639]
gi|68567106|gb|AAY80035.1| site-specific DNA methylase [Sulfolobus acidocaldarius DSM 639]
Length = 319
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIKT 61
K+ DLF G GG L N E S +IN + +I DI I
Sbjct: 5 KVIDLFSGAGGFSLGF----NREPFEIKLSVDINHAAARTYSINFPNTVVIEDDIRNITG 60
Query: 62 QDI-----PDHDVLLAGFPCQPFSQA 82
+DI + D+++ PC+PF+ A
Sbjct: 61 RDIRYLIGGEPDIIIGSPPCEPFTGA 86
>gi|71893964|ref|YP_279410.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae
J]
gi|71852091|gb|AAZ44699.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae
J]
Length = 329
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
DLF G GG+ L S EI +V+TY NF ++
Sbjct: 15 YNFIDLFSGAGGLSCGLVMA----GFLPLASLEIMKQAVETYAYNFKKRSKNKELFKLSD 70
Query: 57 --------AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D++ GFPCQ FS AG
Sbjct: 71 IRDSKIKSEFYDHFKDQELDLIAGGFPCQGFSMAG 105
>gi|117620606|ref|YP_855619.1| modification methylase DdeI [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117562013|gb|ABK38961.1| modification methylase DdeI [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 440
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 32/100 (32%), Gaps = 23/100 (23%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS------------VKTYQANFPNT 50
DLF G GG+ L L Q + F+ E + TY
Sbjct: 12 TFIDLFSGCGGLSLGLMQA----GWKGLFAIEKTSGAFETLQHNLLGGGRYTYDWPNWLP 67
Query: 51 LIFGDIAKIKTQDIPD-------HDVLLAGFPCQPFSQAG 83
+ + + D+++ G PCQ FS AG
Sbjct: 68 KSNMTVDTLLENHKGNLSLLAGKVDLIVGGPPCQGFSLAG 107
>gi|17548155|ref|NP_521557.1| DNA modification cytosine-specific methyltransferase [Ralstonia
solanacearum GMI1000]
gi|17430462|emb|CAD16935.1| probable site-specific dna methylase protein [Ralstonia
solanacearum GMI1000]
Length = 364
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 35/91 (38%), Gaps = 15/91 (16%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAK 58
ML LFCG GG+ EQ E + +I P S+ P DI
Sbjct: 1 ML--LSLFCGAGGLDKGFEQA----GFEVGLAFDIRPDSIESYNRNRRAPIRGYCRDIRD 54
Query: 59 IKTQ-------DIPDHDVLLAGFPCQPFSQA 82
IK + + ++ G PCQ FS+A
Sbjct: 55 IKPKALDELFGETFRPSGIIGGPPCQSFSRA 85
>gi|119873163|ref|YP_931170.1| DNA-cytosine methyltransferase [Pyrobaculum islandicum DSM 4184]
gi|119674571|gb|ABL88827.1| DNA-cytosine methyltransferase [Pyrobaculum islandicum DSM 4184]
Length = 319
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI 59
M + D+F G GG L + + + EI+ + +TY AN NT++ D+A +
Sbjct: 1 MYNVADIFSGAGGFGLGFRKA----GFKIKVAVEIDRDAARTYSANHQNTVVLQEDVANV 56
Query: 60 KTQD----IPDHDVLLAGFPCQPFSQA 82
+D + +++ PC+PF+ A
Sbjct: 57 DYKDLVKYGGEIKIIIGSPPCEPFTAA 83
>gi|79835453|gb|ABB52085.1| Mod [Arthrospira platensis]
gi|291569776|dbj|BAI92048.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
Length = 429
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 28/87 (32%), Gaps = 11/87 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
+ D F G GG L + H + EI+ ++ + I
Sbjct: 40 YSVLDTFAGAGGFSLGFQWAGAH----IIGAIEIDEWAGETFQFNHPNAHLIKGDIKGIT 95
Query: 58 KIKTQDIP---DHDVLLAGFPCQPFSQ 81
+ D ++L G PCQ FS
Sbjct: 96 DEQILDTFGEIKPHIILGGIPCQGFSI 122
>gi|17233286|ref|NP_490376.1| hypothetical protein all7270 [Nostoc sp. PCC 7120]
gi|17135808|dbj|BAB78354.1| all7270 [Nostoc sp. PCC 7120]
Length = 238
Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Query: 1 MLKITDLFCGIGGI-RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
M + LF GIGG+ + + EI+PYS + P T I DI
Sbjct: 1 MKSVLSLFSGIGGLCHHGIAAAGLSHKFQVKQFVEISPYSQSQLRHEQPQTPIHSDITT- 59
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D++ GFPC S +G
Sbjct: 60 YNCHRGQFDIVCGGFPCAGTSNSG 83
>gi|291457577|ref|ZP_06596967.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium breve DSM
20213]
gi|291380630|gb|EFE88148.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium breve DSM
20213]
Length = 191
Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ LF GI + E +E+ P+ + ++PN D+ K+
Sbjct: 27 IRYISLFSGI----EAASVAWQPLGWEPIAYAEVEPFPKAVLKHHYPNVPDLRDMTKVNW 82
Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83
++ DV++ G PCQ FS AG
Sbjct: 83 KEYHHAADVVVGGSPCQAFSIAG 105
>gi|254421659|ref|ZP_05035377.1| C-5 cytosine-specific DNA methylase superfamily [Synechococcus
sp. PCC 7335]
gi|196189148|gb|EDX84112.1| C-5 cytosine-specific DNA methylase superfamily [Synechococcus
sp. PCC 7335]
Length = 427
Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 14/89 (15%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIKTQD 63
DLF G GG+ L EQ + + EI+P ++ +I + ++ ++
Sbjct: 12 IDLFAGAGGLCLGFEQA----GFDVPVAIEIDPIHAAVHRFNFPLCKVIPRSVKEVTGKE 67
Query: 64 ---------IPDHDVLLAGFPCQPFSQAG 83
++ G PCQ FS G
Sbjct: 68 ILSVAKLSSQQPITAVIGGAPCQGFSVMG 96
>gi|302876780|ref|YP_003845413.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|307687461|ref|ZP_07629907.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|302579637|gb|ADL53649.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
Length = 578
Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF G G L + ++SEI P+ V+ P GDI +
Sbjct: 5 LTLGSLFDGSAGFPLG----GLISGITPLWASEIEPFPVRVTTKRLPQVEHLGDITTLNG 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ D++ G PCQ S AG
Sbjct: 61 STLAPVDIITFGSPCQDMSVAG 82
>gi|268607976|ref|ZP_06141707.1| cytosine-specific DNA-methyltransferase Sau96I [Ruminococcus
flavefaciens FD-1]
Length = 407
Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52
+LF G GG+ L +E+ E++ + T + N P +
Sbjct: 74 FSTIELFAGAGGLALGVEKA----GFNTLGLVEVDKDASDTLRRNRPEWRVINDDIANVS 129
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ + + D+L G PCQ FS AG
Sbjct: 130 CLDLQEYFGLKQGELDLLSGGAPCQSFSYAG 160
>gi|21241348|ref|NP_640930.1| cytosine methyltransferase [Xanthomonas axonopodis pv. citri str.
306]
gi|21106676|gb|AAM35466.1| cytosine methyltransferase [Xanthomonas axonopodis pv. citri str.
306]
Length = 106
Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ LF G GG+ ++ FS++I + KT + FP++ + +
Sbjct: 17 VISLFSGCGGMDFGIKAA----GGRIVFSNDILADACKTLEKYFPDSTVSCG-DIAALHE 71
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
P+ DV++ G+PCQ FS AG
Sbjct: 72 FPEADVVVGGYPCQSFSMAG 91
>gi|266624606|ref|ZP_06117541.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM
13479]
gi|288863534|gb|EFC95832.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM
13479]
Length = 434
Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + ++SE+ P ++ + + P + GDI K+
Sbjct: 4 ITLGTLFDGIGGFP----YAALFYGIRPVWASEVLPTAISVTKRHIPEMVHVGDITKLDG 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ +P D++ G PCQ S +G
Sbjct: 60 RKLPPVDIITFGSPCQGLSISG 81
>gi|167771959|ref|ZP_02444012.1| hypothetical protein ANACOL_03332 [Anaerotruncus colihominis DSM
17241]
gi|167665757|gb|EDS09887.1| hypothetical protein ANACOL_03332 [Anaerotruncus colihominis DSM
17241]
Length = 520
Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF G GG L + ++SE+ + ++ + FP+ GDI +I
Sbjct: 5 ITMGSLFDGSGGFPL----ASAIHGILPVWASEVEKFPIEVTKKRFPHMEHLGDITRIDG 60
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
I D++ G PCQ S AG
Sbjct: 61 AKIRPVDIITFGSPCQDLSVAG 82
>gi|318057151|ref|ZP_07975874.1| DNA-cytosine methyltransferase [Streptomyces sp. SA3_actG]
gi|318076183|ref|ZP_07983515.1| DNA-cytosine methyltransferase [Streptomyces sp. SA3_actF]
Length = 386
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Query: 6 DLFCGIGGIRLDLEQTFNHRN-----VECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
DLF G GG + + E++P + TY ANFP+ + I
Sbjct: 2 DLFAGAGGFSAGFH-AYRPHGPASSPFRALAAVEMDPAAAATYAANFPSAKVSAIRIEGW 60
Query: 60 KTQDIPDHDVLLAGFPCQPFS 80
DV++ G PCQ FS
Sbjct: 61 DPTPYEGVDVIMGGPPCQGFS 81
>gi|313115273|ref|ZP_07800751.1| C-5 cytosine-specific DNA methylase [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310622412|gb|EFQ05889.1| C-5 cytosine-specific DNA methylase [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 338
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L LF GIGG+ L E E E Y + ++PN F DI
Sbjct: 4 LTHVSLFSGIGGLDLAAEAA----GFETVCQCEWADYPYSILEQHWPNVPKFRDITTFTK 59
Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83
+ ++ GFPCQPFS G
Sbjct: 60 EAFFEKTGLETVTIISGGFPCQPFSSVG 87
>gi|121592996|ref|YP_984892.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42]
gi|120605076|gb|ABM40816.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42]
Length = 449
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 16/97 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQT---FNHRNVECFFSSEINPYSVKTYQANFPNTLI------ 52
L++ +LF G+GG R LEQ + ++++ P S K + A
Sbjct: 12 LRVMELFAGVGGFRQGLEQVRTPAQQAAFKVVWANQYEPASKKQWAAEVYRARWGVQDLV 71
Query: 53 FGDIAKIKTQ-------DIPDHDVLLAGFPCQPFSQA 82
DI ++ + D DVL+ GFPCQ +S A
Sbjct: 72 NEDIFEVLQEPALMASLDALCPDVLVGGFPCQDYSVA 108
>gi|190892898|ref|YP_001979440.1| DNA-cytosine methyltransferase [Rhizobium etli CIAT 652]
gi|190698177|gb|ACE92262.1| putative DNA-cytosine methyltransferase protein [Rhizobium etli
CIAT 652]
Length = 638
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV---KTYQANFPNTLIFGDIAKI 59
+ ++ G GG+ + LE+ E E + Y+ + + ++
Sbjct: 281 TVVEICAGAGGMSIGLERA----GFEHIALIEYDKYAAATLRRNRPDWTVIKEDLRKMDF 336
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K + D++ G PCQP+S G
Sbjct: 337 KLYRQLEIDLVSGGPPCQPYSSDG 360
>gi|308814119|ref|XP_003084365.1| possible site-specific DNA-methyltransferase (ISS) [Ostreococcus
tauri]
gi|116056249|emb|CAL58430.1| possible site-specific DNA-methyltransferase (ISS) [Ostreococcus
tauri]
Length = 625
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ LF GIGG + LE+ E +P + + FP+ + D+A++
Sbjct: 4 LRVASLFAGIGGFDVGLERA----GHRVVLQVEKDPRCRRVLKRRFPDVALVRDVAEVLP 59
Query: 62 QDIPDHDVLLAGFPCQPFS 80
+ D+L+AGFPC S
Sbjct: 60 HALDGVDLLVAGFPCNDCS 78
>gi|330991509|ref|ZP_08315460.1| Modification methylase DdeI [Gluconacetobacter sp. SXCC-1]
gi|329761528|gb|EGG78021.1| Modification methylase DdeI [Gluconacetobacter sp. SXCC-1]
Length = 449
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 29/96 (30%), Gaps = 15/96 (15%)
Query: 3 KITDLFCGIGGIRLDLEQTF---------NHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
DLF G GG+ L L + E + + I+ S+ +
Sbjct: 33 TCIDLFAGCGGMSLGLHMAGFRGIMGIEAHPHAFESYCHNLIDNPSIGMDWPAWLPLGPN 92
Query: 54 GDI------AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D+L G PCQ FS G
Sbjct: 93 NVVDLAANYTSQLAAMAGSVDLLAGGPPCQGFSTNG 128
>gi|227547415|ref|ZP_03977464.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|227212062|gb|EEI79958.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium longum subsp.
infantis ATCC 55813]
Length = 433
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 24/105 (22%)
Query: 2 LKITDLFCGIGGIRLDL---EQTFNHR-------NVECFFSSEINPYSVKTYQANFPNTL 51
++I +LF G+GG RL L + + + ++++ P ++ Q +
Sbjct: 13 IRIAELFAGVGGFRLGLDGYHDAAHPEFDMKPAGDFKTVWANQWEPNGQESKQFAWRCYE 72
Query: 52 IFGDIAKIKTQDI--------------PDHDVLLAGFPCQPFSQA 82
+DI P+ D+L+ GFPCQ +S A
Sbjct: 73 KRFGEGSCVNEDIAVVLQEVKDGKRSIPEFDMLVGGFPCQDYSVA 117
>gi|328772423|gb|EGF82461.1| hypothetical protein BATDEDRAFT_3612 [Batrachochytrium
dendrobatidis JAM81]
Length = 344
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ + F GIGG+ LE+ S ++N ++ YQ NF I +
Sbjct: 4 LRVLEFFSGIGGLHYGLERA--ESTATVLASFDVNEHANSCYQHNFGIKPSNKSIDTLTA 61
Query: 62 QDIPDHD--VLLAGFPCQPFSQAG 83
+DI +D L PCQPF+Q G
Sbjct: 62 KDIEKYDSNCWLLSPPCQPFTQGG 85
>gi|328768493|gb|EGF78539.1| hypothetical protein BATDEDRAFT_13083 [Batrachochytrium
dendrobatidis JAM81]
Length = 350
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ + F GIGG+ LE+ S ++N ++ YQ NF I +
Sbjct: 5 LRVLEFFSGIGGLHYGLERA--ESTATVLASFDVNEHANSCYQHNFGIKPSNKSIDTLTA 62
Query: 62 QDIPDHD--VLLAGFPCQPFSQAG 83
+DI +D L PCQPF+Q G
Sbjct: 63 KDIEKYDSNCWLLSPPCQPFTQGG 86
>gi|294668765|ref|ZP_06733858.1| modification methylase BsuRI [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309282|gb|EFE50525.1| modification methylase BsuRI [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 313
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M LF G GG + ++ +++I PY+ Y AN P T + K
Sbjct: 1 MATAVSLFSGCGGSDTGVH----RLGIDILMANDIIPYARDVYLANLPQTDYILKDVR-K 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ P D+LL +PCQ FSQ G
Sbjct: 56 LESFPSADLLLGCYPCQGFSQGG 78
>gi|160881053|ref|YP_001560021.1| DNA-cytosine methyltransferase [Clostridium phytofermentans ISDg]
gi|160429719|gb|ABX43282.1| DNA-cytosine methyltransferase [Clostridium phytofermentans ISDg]
Length = 537
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 12/88 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+K+ D FCG GG Q + F+ + +V TY+AN P I+
Sbjct: 1 MKVADFFCGAGGFSEGFRQA----GFDIVFAVDKWLPAVNTYKANKPMVNVIQDDVIRIS 56
Query: 58 KIKTQDI----PDHDVLLAGFPCQPFSQ 81
+ ++ PD +V++ PC FS
Sbjct: 57 NLPDEEFEKLVPDTEVIIGSPPCVAFSN 84
>gi|19112479|ref|NP_595687.1| DNA methyltransferase homolog [Schizosaccharomyces pombe 972h-]
gi|730347|sp|P40999|PMT1M_SCHPO RecName: Full=DNA methyltransferase homolog pmt1; AltName:
Full=M.SpomI; AltName: Full=SpIM.SpoI
gi|563911|emb|CAA57824.1| methyltransferase [Schizosaccharomyces pombe]
gi|5689984|emb|CAB52029.1| DNA methyltransferase homolog [Schizosaccharomyces pombe]
Length = 330
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ +L+ GIGG+ L + + +INP + + Y N DI+ +
Sbjct: 7 LRVLELYSGIGGMHYALNLANIPA--DIVCAIDINPQANEIYNLNHGKLAKHMDISTLTA 64
Query: 62 QDIPDHD--VLLAGFPCQPFSQAG 83
+D D + CQPF++ G
Sbjct: 65 KDFDAFDCKLWTMSPSCQPFTRIG 88
>gi|256397638|ref|YP_003119202.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM
44928]
gi|256363864|gb|ACU77361.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM
44928]
Length = 389
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---------NTLI 52
LK+ DLFCG GG E+T + E + +I P SV T+Q N +
Sbjct: 4 LKVMDLFCGTGGFSKGFEKTGS---FEVVYGIDILPLSVATFQLNHEAALALSGDIRKVR 60
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
+IA+ + DV++ G PCQ FS
Sbjct: 61 RSEIAEKLNLARDEVDVIIGGPPCQGFS 88
>gi|167744430|ref|ZP_02417204.1| hypothetical protein Bpse14_40548 [Burkholderia pseudomallei 14]
Length = 349
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 13/87 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIKT 61
DLFCG GG+ + L++ E NP + +TY+ N + DI +
Sbjct: 7 TAIDLFCGAGGLTVGLKKA----GFRVLAGIENNPIAAETYKLNNRAAKIYQDDIRMLCP 62
Query: 62 Q--------DIPDHDVLLAGFPCQPFS 80
+ D+L PCQ FS
Sbjct: 63 TTVMQELGLKRGELDLLAGCPPCQGFS 89
>gi|167751359|ref|ZP_02423486.1| hypothetical protein EUBSIR_02345 [Eubacterium siraeum DSM 15702]
gi|167655605|gb|EDR99734.1| hypothetical protein EUBSIR_02345 [Eubacterium siraeum DSM 15702]
Length = 349
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT--- 61
DLFCG+GG+ L + +I+P TY+ N +I ++
Sbjct: 6 IDLFCGVGGLTRGLLDA----GLNVVAGFDIDPTCQFTYEFNNHVDYHLRNIREVMGEEL 61
Query: 62 ---QDIPDHDVLLAGFPCQPFSQ 81
D +L+ PCQPFSQ
Sbjct: 62 NEIYDENVTKILVGCAPCQPFSQ 84
>gi|229489314|ref|ZP_04383178.1| DNA methylase [Rhodococcus erythropolis SK121]
gi|229323807|gb|EEN89564.1| DNA methylase [Rhodococcus erythropolis SK121]
Length = 358
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLF G GG+ + E + + T +A +T D+ +
Sbjct: 15 RMVDLFAGPGGLDVAAHWLGV-----PVHGVEWDKDACVTRRAAGLSTEEG-DVRCVGPA 68
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ P VL G PCQ ++ AG
Sbjct: 69 NFPGTTVLAGGPPCQTYTLAG 89
>gi|158284395|ref|XP_306830.2| Anopheles gambiae str. PEST AGAP012836-PA [Anopheles gambiae str.
PEST]
gi|157021124|gb|EAA45924.2| AGAP012836-PA [Anopheles gambiae str. PEST]
Length = 238
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKT 61
++ +LF GIGG+R+ LEQ E + ++NP + + Y+ NF T+ G+I +
Sbjct: 16 RVLELFSGIGGMRMALEQAGKE--FEIVSAIDVNPIANEVYKHNFGAKTVRNGNILSLTA 73
Query: 62 QDIP--DHDVLLAGFPCQPFSQAG 83
+ + D +L PCQPF++ G
Sbjct: 74 EKVTKLKVDTILMSPPCQPFTRNG 97
>gi|315604954|ref|ZP_07880010.1| modification methylase [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313349|gb|EFU61410.1| modification methylase [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 322
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57
L ++ G GG L LEQ + EI+ ++ T + N P +
Sbjct: 3 LTSIEICAGAGGQALGLEQA----GFDHLAVVEIDHHACNTLRENRPQWNVIEGDVVPWI 58
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + D++ G PC PFS AG
Sbjct: 59 RDHAHEYRGVDLVAGGVPCPPFSYAG 84
>gi|75812610|ref|YP_320229.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
gi|75705366|gb|ABA25040.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
Length = 253
Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 1 MLKITDLFCGIGGI-RLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
M + LF GIGG+ + + EI+PYS + P T I DI
Sbjct: 1 MKSVLSLFSGIGGLCHHGIAAAGLSHKFQVRQFVEISPYSQSVLRYEQPQTPIHSDITTY 60
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D+L GFPC S +G
Sbjct: 61 H-CNRGQFDILCGGFPCAGTSNSG 83
>gi|319782483|ref|YP_004141959.1| DNA-cytosine methyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168371|gb|ADV11909.1| DNA-cytosine methyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 368
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 32/93 (34%), Gaps = 17/93 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-----FGDI 56
+ DLF G GG L + + E N + TY+ NF DI
Sbjct: 1 MNCIDLFAGAGGFSLAARNA----GLTIKLAVEHNKSAASTYRKNFAALEPKLVLRDEDI 56
Query: 57 AKIKTQD--------IPDHDVLLAGFPCQPFSQ 81
+ P D+LL G PCQ FS
Sbjct: 57 RTLSPVKLAREIFGRNPSCDLLLGGPPCQGFST 89
>gi|20068989|gb|AAM09642.1|AF458983_2 m6 adenine and m5 cytosine DNA methyltransferase [Hafnia alvei]
Length = 1061
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 27/104 (25%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
D+FCG GG+ L LE + + N ++ TY N P L + + +T
Sbjct: 810 TCVDVFCGAGGLSLGLESA----GWNIVAAIDNNSDALDTYCFNRPCDLEPDNAQEGRTA 865
Query: 63 DIPDH-----------------------DVLLAGFPCQPFSQAG 83
D+L+ G PCQ FS AG
Sbjct: 866 VFKRDLQERREFEDVVTRIETGLGSTKLDLLVGGPPCQGFSHAG 909
>gi|269792571|ref|YP_003317475.1| DNA-cytosine methyltransferase [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100206|gb|ACZ19193.1| DNA-cytosine methyltransferase [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 350
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKTYQANFPNTL----IFG 54
++ +LFCG GG+ + + ++++ + + +TY+ N
Sbjct: 3 YRLGELFCGPGGLAYGAINARSADGKHFIVHEWANDYDKDTCETYRYNICPDRPESVYHE 62
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI K+ + D L GFPC FS G
Sbjct: 63 DIRKLNMDKLTPIDALAFGFPCNDFSVVG 91
>gi|23465149|ref|NP_695752.1| modification methylase Sau3AI [Bifidobacterium longum NCC2705]
gi|189440221|ref|YP_001955302.1| site-specific DNA methylase [Bifidobacterium longum DJO10A]
gi|23325769|gb|AAN24388.1| modification methylase Sau3AI [Bifidobacterium longum NCC2705]
gi|189428656|gb|ACD98804.1| Site-specific DNA methylase [Bifidobacterium longum DJO10A]
Length = 423
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 24/105 (22%)
Query: 2 LKITDLFCGIGGIRLDL---EQTFNHR-------NVECFFSSEINPYSVKTYQANFPNTL 51
++I +LF G+GG RL L + + + ++++ P ++ Q +
Sbjct: 3 IRIAELFAGVGGFRLGLDGYHDAAHPEFDMKPAGDFKTVWANQWEPNGQESKQFAWRCYE 62
Query: 52 IFGDIAKIKTQDI--------------PDHDVLLAGFPCQPFSQA 82
+DI P+ D+L+ GFPCQ +S A
Sbjct: 63 KRFGEGSCVNEDIAVVLQEVKDGKRSIPEFDMLVGGFPCQDYSVA 107
>gi|314055145|ref|YP_004063483.1| putative cytosine-specific methyltransferase [Ostreococcus tauri
virus 2]
gi|313575036|emb|CBI70049.1| putative cytosine-specific methyltransferase [Ostreococcus tauri
virus 2]
Length = 349
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 9/86 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIKT 61
LF G GG L + ++ SE+ + + LI GDI KI
Sbjct: 5 TALSLFSGCGGDTLGMTNA----GIDVVAYSELKTKFQETHELNFKNSKLIGGDINKITD 60
Query: 62 QDI----PDHDVLLAGFPCQPFSQAG 83
+D D++ GFPCQ FS AG
Sbjct: 61 EDFEKLSGKIDIIFGGFPCQSFSNAG 86
>gi|327311917|ref|YP_004338814.1| DNA-cytosine methyltransferase [Thermoproteus uzoniensis 768-20]
gi|326948396|gb|AEA13502.1| DNA-cytosine methyltransferase [Thermoproteus uzoniensis 768-20]
Length = 312
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDI 56
M + DLF G GG EI+ + +TY NFP I
Sbjct: 1 MYNVVDLFAGGGGFSRGFADA----GFRVVLGVEIDANAARTYSYNFPRAVVLEEDVASI 56
Query: 57 AKIK-TQDIPDHDVLLAGFPCQPFS 80
+ + + + DV++ G PC+PF+
Sbjct: 57 SYREVERHVGKVDVVIGGSPCEPFT 81
>gi|317057160|ref|YP_004105627.1| XRE family transcriptional regulator [Ruminococcus albus 7]
gi|315449429|gb|ADU22993.1| transcriptional regulator, XRE family [Ruminococcus albus 7]
Length = 407
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
+LF G GG+ L +E+ E++ + + +I+
Sbjct: 74 FSTIELFAGAGGLALGVEKA----GFITLGLVEVDKDASDTLRRNRPEWRVINDDIANIS 129
Query: 58 KIKTQDI-----PDHDVLLAGFPCQPFSQAG 83
+ QD + D+L G PCQ FS AG
Sbjct: 130 CLDLQDYFGLKKGELDLLSGGAPCQSFSYAG 160
>gi|255530843|ref|YP_003091215.1| DNA-cytosine methyltransferase [Pedobacter heparinus DSM 2366]
gi|255343827|gb|ACU03153.1| DNA-cytosine methyltransferase [Pedobacter heparinus DSM 2366]
Length = 474
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 13/88 (14%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAKI- 59
D F G GG+ L + F ++ +++TY N N GDI K+
Sbjct: 94 FADFFSGAGGLSQGLINA----GFQPVFVNDNYTDALETYYFNHSLPLNQFYNGDIRKLV 149
Query: 60 -----KTQDIPDHDVLLAGFPCQPFSQA 82
++ G PCQ FS A
Sbjct: 150 ENFSQYKHLFKGVKIICGGPPCQGFSTA 177
>gi|241661827|ref|YP_002980187.1| DNA-cytosine methyltransferase [Ralstonia pickettii 12D]
gi|240863854|gb|ACS61515.1| DNA-cytosine methyltransferase [Ralstonia pickettii 12D]
Length = 398
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 21/97 (21%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---------FPNTLI 52
L+ DLF G GG L + + + E++ + +TY AN L
Sbjct: 39 LQCVDLFAGAGGFSLAAHKA----GMRVVAAVELDKKASETYHANLIKRRKKVSDRPRLY 94
Query: 53 FGDIAKIKTQDIPD--------HDVLLAGFPCQPFSQ 81
+I ++ + D++L G PCQ FS
Sbjct: 95 SENIMELSPERFKSENFPEGASCDIVLGGPPCQGFSV 131
>gi|168207074|ref|ZP_02633079.1| Dcm [Clostridium perfringens E str. JGS1987]
gi|170661488|gb|EDT14171.1| Dcm [Clostridium perfringens E str. JGS1987]
Length = 339
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59
+++ LF GIG +E + E E + Y+ Y F D+ +
Sbjct: 1 MRVLSLFSGIGAFERAIEN--KNIEHEIVNYCEKDKYASYAYSKLFRLSEAKNLWDVNLV 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D D++ GFPC S AG
Sbjct: 59 DGKVFKDIDLVTYGFPCTDISLAG 82
>gi|53728781|ref|ZP_00135132.2| COG0270: Site-specific DNA methylase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 354
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDI 56
M + GI + + + + SEI P+ Y + +
Sbjct: 1 MFTYGSICSGI----EAVSVAWKGIG-KPVWFSEIEPFPCAVLAYHYPDIPNLGDMTALV 55
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
KI ++IP DVL+ G PCQ FS AG
Sbjct: 56 PKILNREIPAPDVLVGGTPCQAFSVAG 82
>gi|189233760|ref|XP_001814230.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase
[Tribolium castaneum]
Length = 1187
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK D+F G GG+ ++ E + ++ T++ N +F D +
Sbjct: 735 LKCLDVFAGCGGLSQGFHAAGVA---NTKWAIENDKPALDTFRHNNRTCHVFRDDCNVLL 791
Query: 62 QDIP----------DHDVLLAGFPCQPFS 80
+++ + ++++ G PCQ FS
Sbjct: 792 RNVMSGKGGLPPKSEVEMIVGGPPCQGFS 820
>gi|312601558|gb|ADQ90813.1| Cytosine-specific methyltransferase [Mycoplasma hyopneumoniae 168]
Length = 406
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 32/95 (33%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
DLF G G+ L S EI +V+TY NF ++
Sbjct: 92 YNFIDLFSGAAGLSCGLVMA----GFLPLASLEIMKQAVETYAYNFKKRSKNKELFKLGD 147
Query: 57 --------AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D++ GFPCQ FS AG
Sbjct: 148 IRDSKIKSEFYNHFKDQELDLIAGGFPCQGFSMAG 182
>gi|153870986|ref|ZP_02000267.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
gi|152072545|gb|EDN69730.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
Length = 350
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHR-NVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKI 59
++I F G GG+ + EQ + + FS++I Y + DI ++
Sbjct: 114 IEIASYFTGAGGLDIGFEQASDDIIQFKTVFSTDIESYVEQTILTNRAEWDFLRADIREL 173
Query: 60 KTQDIPDHD-----VLLAGFPCQPFSQAG 83
+ + +++ G PCQPFS AG
Sbjct: 174 SPEIVRRKMGKKPYIIIGGPPCQPFSVAG 202
>gi|115345708|ref|YP_771887.1| DNA-cytosine methyltransferase, putative [Roseobacter
denitrificans OCh 114]
gi|115293028|gb|ABI93479.1| DNA-cytosine methyltransferase, putative [Roseobacter
denitrificans OCh 114]
Length = 394
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKI 59
M K + F G GG+ + +C F+++ + + +I DI I
Sbjct: 10 MFKFYEFFAG-GGMA----RAGLGEGWKCEFANDFDRKKGATYKKNWGDGEMIVDDIRNI 64
Query: 60 KTQDIP-DHDVLLAGFPCQPFS 80
D+P D++ FPCQ S
Sbjct: 65 GLDDLPGHADLVWGSFPCQDLS 86
>gi|302551692|ref|ZP_07304034.1| modification methylase NaeI [Streptomyces viridochromogenes DSM
40736]
gi|302469310|gb|EFL32403.1| modification methylase NaeI [Streptomyces viridochromogenes DSM
40736]
Length = 415
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ ++ G GG L LE + + E++ +V T +AN ++ GD+A
Sbjct: 1 MSAVEICAGAGGQSLGLELA----GFDHAVAVELDENAVNTLRANRDWRVVHGDVADEDL 56
Query: 62 QDIPDH---DVLLAGFPCQPFSQAG 83
+ D+L G PC PFS AG
Sbjct: 57 WKPGKYIDIDLLAGGVPCPPFSIAG 81
>gi|293392447|ref|ZP_06636769.1| site-specific DNA methylase [Serratia odorifera DSM 4582]
gi|291425101|gb|EFE98308.1| site-specific DNA methylase [Serratia odorifera DSM 4582]
Length = 379
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIKT 61
+ F GIG R +EQ ++ ++++ + Y+ + L+ DI +K+
Sbjct: 13 TALEFFAGIGLSRAGMEQA----GIKTIWANDYDQNKKSMYEGHWKSHELLLADIHALKS 68
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+D+P DV A PC S AG
Sbjct: 69 EDLPAADVAWASSPCTDLSLAG 90
>gi|307704025|ref|ZP_07640957.1| cytosine methyl transferase [Streptococcus mitis SK597]
gi|307622416|gb|EFO01421.1| cytosine methyl transferase [Streptococcus mitis SK597]
Length = 351
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLFCGIGG+ ++Q + +I+ S Y+ N IF D+ +I+
Sbjct: 3 INAVDLFCGIGGLTYGIQQA----GINVVAGYDIDEKSKFAYEYNNGAKFIFKDVREIED 58
Query: 62 QD-----IPDHDV--LLAGFPCQPFSQ 81
+ PD D+ L+ PCQPFS
Sbjct: 59 NEILGLYPPDTDIKVLIGCAPCQPFST 85
>gi|160945835|ref|ZP_02093061.1| hypothetical protein FAEPRAM212_03368 [Faecalibacterium
prausnitzii M21/2]
gi|158443566|gb|EDP20571.1| hypothetical protein FAEPRAM212_03368 [Faecalibacterium
prausnitzii M21/2]
Length = 298
Score = 65.0 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L LF GIGGI L E E + +++P F DI +
Sbjct: 3 LTHFSLFSGIGGIDLAAEAA----GFTSVCQCEWAAFPAAVLASHWPEVPRFQDITTVTK 58
Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83
+ ++ GFPCQPFS AG
Sbjct: 59 EAFFEKTGLRTVTLISGGFPCQPFSTAG 86
>gi|158291464|ref|XP_312975.4| AGAP004101-PA [Anopheles gambiae str. PEST]
gi|157017559|gb|EAA08679.4| AGAP004101-PA [Anopheles gambiae str. PEST]
Length = 345
Score = 65.0 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKT 61
++ +LF GIGG+R+ LE+ E + ++NP + + Y+ NF T+ G+I +
Sbjct: 16 RVLELFSGIGGMRMALEEAGKE--FEIVSAIDVNPIANEVYKHNFGAETVRNGNILSLTA 73
Query: 62 QDIP--DHDVLLAGFPCQPFSQAG 83
+ + D +L PCQPF++ G
Sbjct: 74 EKVTKLKVDTILMSPPCQPFTRNG 97
>gi|60202519|gb|AAX14651.1| BbvCI methyltransferase 2 [Brevibacillus brevis]
Length = 396
Score = 65.0 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 2 LKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAK 58
+K D+F G GG L Q E + EI+ ++ +TYQ N N + DI K
Sbjct: 1 MKFVALDIFAGCGGFSSGLIQA----GHEVTSALEIDSWAAETYQFNHRNVNLLTEDITK 56
Query: 59 IKTQDIPDH-----DVLLAGFPCQPFSQAG 83
+ + + ++++ G PCQ FS +G
Sbjct: 57 VDSTYFKVNFKDRVNLVVGGPPCQGFSVSG 86
>gi|169834887|ref|YP_001715830.1| modification methylase [Clostridium botulinum A3 str. Loch Maree]
gi|169408994|gb|ACA57404.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum A3
str. Loch Maree]
Length = 284
Score = 65.0 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+ F G GG+ L L Q + S EI+ T + NF + + DI+KI
Sbjct: 1 MITAKSYFSGAGGMDLGLVQA----GINITHSYEIDSTCCNTLRTNFTHEIHQEDISKIT 56
Query: 61 TQDIPDHDVLLAGFPCQPFS 80
D D D+ + FPC +S
Sbjct: 57 VLDQQDADIYVGTFPCTKYS 76
>gi|113477918|ref|YP_723979.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
gi|110168966|gb|ABG53506.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
Length = 337
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 28/80 (35%), Gaps = 7/80 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D+F G GG+ L E + + N IA
Sbjct: 21 VIDIFAGCGGLSLGFE----AQGFTTHG---FEMNADCCATYNKNLKGNCTQIALTSETK 73
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
+P V++ G PCQPFS G
Sbjct: 74 LPPGKVIIGGPPCQPFSVGG 93
>gi|166366114|ref|YP_001658387.1| cytosine-specific modification DNA methylase [Microcystis
aeruginosa NIES-843]
gi|166088487|dbj|BAG03195.1| cytosine-specific modification DNA methylase [Microcystis
aeruginosa NIES-843]
Length = 431
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 38/119 (31%), Gaps = 38/119 (31%)
Query: 3 KITDLFCGIGGIRLDLEQTFN--------------------------HRNVECFFSSEIN 36
++ LF G GG+ L LE F E F+++I
Sbjct: 7 RVLSLFSGCGGMDLGLEGGFWVHQDCVNENIHRDWIVERREPWLKLPRTTFETVFANDIT 66
Query: 37 PYSVKTYQANFPNT-----LIFGDIAKIKTQDIP-------DHDVLLAGFPCQPFSQAG 83
+ + F G I + Q + DV+ GFPCQ FS +G
Sbjct: 67 KAAHNAWIPYFEKRGKKNVFHLGSIVDLVKQAEKGEFQFPSNIDVVTGGFPCQDFSVSG 125
>gi|119719333|ref|YP_919828.1| DNA-cytosine methyltransferase [Thermofilum pendens Hrk 5]
gi|119524453|gb|ABL77825.1| DNA-cytosine methyltransferase [Thermofilum pendens Hrk 5]
Length = 320
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
L + DLF G GG + E++P + + ++ + D+ ++
Sbjct: 5 LTVLDLFAGAGGFSRGF----AEEGFSIVGAVEVDPLAAEAFRLNFPGARVFEEDVREVH 60
Query: 61 TQDI-----PDHDVLLAGFPCQPFSQA 82
++DI V++ G PC+ +S+A
Sbjct: 61 SRDILLGLGFRPRVIIGGPPCEAYSRA 87
>gi|299531463|ref|ZP_07044871.1| DNA-cytosine methyltransferase [Comamonas testosteroni S44]
gi|298720626|gb|EFI61575.1| DNA-cytosine methyltransferase [Comamonas testosteroni S44]
Length = 435
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-----DI 56
L LF G GG+ L E+ S EI +T ++N P ++ D+
Sbjct: 118 LSSLSLFAGGGGLDLGFERA----GFSHTASFEILDVCGETLRSNRPEWTVYSGAEAGDV 173
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D++ G PCQPFS AG
Sbjct: 174 RTAPFSNFRGVDIVHGGPPCQPFSIAG 200
>gi|72080942|ref|YP_288000.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae
7448]
Length = 393
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 33/95 (34%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
DLF G GG+ L S +I +V+TY NF ++
Sbjct: 69 YNFIDLFSGAGGLSCGLVMA----GFLPLASLKIMKQAVETYAYNFKKRSKNKELFKLGD 124
Query: 57 --------AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D++ GFPCQ FS AG
Sbjct: 125 IRDSKIKSEFYDHFKDQELDLIAGGFPCQGFSMAG 159
>gi|149190497|ref|ZP_01868767.1| DNA-cytosine methyltransferase [Vibrio shilonii AK1]
gi|148835621|gb|EDL52588.1| DNA-cytosine methyltransferase [Vibrio shilonii AK1]
Length = 349
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 10/86 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M++ DLFCG GG+ L++ ++ +I Y+ N I + ++
Sbjct: 1 MIRAIDLFCGAGGLTHGLQRA----GIDVVAGYDIEAQCRFAYERNNDAVFIQKSVTDLQ 56
Query: 61 TQDIPDHD------VLLAGFPCQPFS 80
++ + VL PCQ FS
Sbjct: 57 IEEFNHYFGDAEVRVLAGCAPCQTFS 82
>gi|216165|gb|AAA32601.1| methyltransferase (ttg start codon) [Bacillus phage SPbeta]
Length = 143
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--ANFPNTLIFGDIAKI 59
L++ LF GIG L E SEI+ Y++K+Y N TL GDI+K
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVD--YELIGFSEIDKYAIKSYCAIHNVSETLNVGDISKA 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K +IP D+L +GFPC FS AG
Sbjct: 62 KKDNIPYFDLLTSGFPCPTFSVAG 85
>gi|295395397|ref|ZP_06805596.1| modification methylase NaeI [Brevibacterium mcbrellneri ATCC
49030]
gi|294971719|gb|EFG47595.1| modification methylase NaeI [Brevibacterium mcbrellneri ATCC
49030]
Length = 355
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--IAKI 59
L ++ G GG L LEQ E EI+ +V T + N P + +
Sbjct: 3 LTSVEICAGAGGQALGLEQA----GFEHTCLVEIDSDAVATLRMNRPRWNVHQADLLNWQ 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ + D+L G PC PFS AG
Sbjct: 59 PPKSLERPDLLAGGVPCPPFSLAG 82
>gi|307210936|gb|EFN87251.1| tRNA (cytosine-5-)-methyltransferase [Harpegnathos saltator]
Length = 238
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+K+ +L+ GIGG+ L ++ + + +INP + Y+ NFP T+ + +I I
Sbjct: 1 MKVLELYSGIGGMHFALLESGIPA--KVVAAIDINPVANDVYRHNFPETVLMNRNIQSIS 58
Query: 61 TQDIPDHDV--LLAGFPCQPFSQAG 83
Q + DV +L PCQPF++ G
Sbjct: 59 AQTLNKLDVDAILMSPPCQPFTRLG 83
>gi|169834680|ref|YP_001693292.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1
str. Okra]
gi|169123228|gb|ACA47063.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1
str. Okra]
Length = 284
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+ F G GG+ L L Q + S EI+ T + NF + + DI+KI
Sbjct: 1 MITAKSYFSGAGGMDLGLVQA----GINITHSYEIDSTCCNTLRTNFTHEIHQEDISKIT 56
Query: 61 TQDIPDHDVLLAGFPCQPFS 80
D D D+ + FPC +S
Sbjct: 57 VLDQQDADIYVGTFPCTRYS 76
>gi|315644199|ref|ZP_07897369.1| DNA-cytosine methyltransferase [Paenibacillus vortex V453]
gi|315280574|gb|EFU43863.1| DNA-cytosine methyltransferase [Paenibacillus vortex V453]
Length = 485
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINP 37
+ LF G GG+ + E + +++++
Sbjct: 57 FNLVSLFSGCGGLDMGFELAGLAAVIGEEAAMEAFKDKDKFNEVRHKSIFHTIYTNDLFT 116
Query: 38 YSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++Y+ NFP +++ K ++ P DV++ GFPC FS+AG
Sbjct: 117 EANESYKINFPQSVVQHRKDIRKVKNFPKADVVVGGFPCPGFSEAG 162
>gi|269129048|ref|YP_003302418.1| DNA-cytosine methyltransferase [Thermomonospora curvata DSM
43183]
gi|268314006|gb|ACZ00381.1| DNA-cytosine methyltransferase [Thermomonospora curvata DSM
43183]
Length = 418
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57
L + ++ G GG L LE + + E++ + T + N P I +
Sbjct: 4 LNVVEICAGAGGQSLGLELA----GFKHALAVELDANACNTLRLNRPEWKIAEGDAASLD 59
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
D + D+L G PC PF+ AG
Sbjct: 60 VWNPADYQEIDLLAGGVPCPPFTIAG 85
>gi|15966901|ref|NP_387254.1| putative cytosine-specific methyltransferase protein [Sinorhizobium
meliloti 1021]
gi|15076174|emb|CAC47727.1| Putative cytosine-specific methyltransferase [Sinorhizobium
meliloti 1021]
Length = 440
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 32/99 (32%), Gaps = 17/99 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV---------ECFFSSEINPY-SVKTYQANFPNTL 51
DLF G GG+ L L Q F ++ I+ + ++
Sbjct: 4 YSFADLFSGCGGLSLGLTQAGLKGQFAIERDAMAFRTFATNFIDARGASDRFEWPAWLER 63
Query: 52 IFGDIAKIKTQD-------IPDHDVLLAGFPCQPFSQAG 83
I ++ DVL G PCQ FS AG
Sbjct: 64 RAWGIEELLEYHGKELLGLRGTIDVLAGGPPCQGFSFAG 102
>gi|295104078|emb|CBL01622.1| Site-specific DNA methylase [Faecalibacterium prausnitzii SL3/3]
Length = 298
Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L LF GIGGI L E E + +++P F DI +
Sbjct: 3 LTHFSLFSGIGGIDLAAEAA----GFTSVCQCEWAAFPAAVLASHWPEVPRFQDITTVTK 58
Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83
+ ++ GFPCQPFS AG
Sbjct: 59 EAFFEKTGLRTVTLISGGFPCQPFSTAG 86
>gi|261338523|ref|ZP_05966407.1| modification methylase Sau3AI [Bifidobacterium gallicum DSM 20093]
gi|270276533|gb|EFA22387.1| modification methylase Sau3AI [Bifidobacterium gallicum DSM 20093]
Length = 423
Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 24/105 (22%)
Query: 2 LKITDLFCGIGGIRLDLE----------QTFNHRNVECFFSSEINPYSVKTYQANFPNT- 50
++I +LF G+GG RL L+ + ++++ P + Q +
Sbjct: 4 IRIAELFAGVGGFRLGLDGYDNPEHPDFHMEPAGDFRTVWANQWEPNGQDSKQFAWRCYE 63
Query: 51 -------LIFGDIAKI------KTQDIPDHDVLLAGFPCQPFSQA 82
+ DIA + ++IP+ D+L+ GFPCQ +S A
Sbjct: 64 DRFGAGSCVNEDIAVVLDQVDAGEREIPEFDMLVGGFPCQDYSVA 108
>gi|257440380|ref|ZP_05616135.1| type II DNA modification methyltransferase [Faecalibacterium
prausnitzii A2-165]
gi|257197226|gb|EEU95510.1| type II DNA modification methyltransferase [Faecalibacterium
prausnitzii A2-165]
Length = 298
Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L LF GIGGI L E E + +++P F DI +
Sbjct: 3 LTHFSLFSGIGGIDLAAEAA----GFTSVCQCEWAAFPAAVLASHWPEVPRFQDITTVTK 58
Query: 62 QDI------PDHDVLLAGFPCQPFSQAG 83
+ ++ GFPCQPFS AG
Sbjct: 59 EAFFEKTGLRTVTLISGGFPCQPFSTAG 86
>gi|238760580|ref|ZP_04621711.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236]
gi|238701199|gb|EEP93785.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236]
Length = 304
Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFS-SEINPYSVKTYQANFPNTLIFGDIAKIK 60
+K DLF GIGG V+ ++ + + + + D+ +
Sbjct: 1 MKAIDLFSGIGGSSTGAAMA----GVQVVWAANHWQEAVRSHAENHPLAVHVCQDLHQAD 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
+P HD+++A CQ S+A
Sbjct: 57 WSQVPHHDLMMASPCCQGHSKA 78
>gi|254416651|ref|ZP_05030402.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
gi|196176617|gb|EDX71630.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
Length = 428
Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 27/102 (26%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIA------ 57
DLF G+GG L +EQ + + E +P ++ ++ D+
Sbjct: 11 IDLFAGVGGFSLGIEQA----GFDVAIAVEKDPIHAAVYKFNFPQTHVLCADVTELTGTH 66
Query: 58 ----------------KIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ +D D +++ G PCQ FS G
Sbjct: 67 IQKALRNWCDRQKRPVRVSDRDRMDINLVFGGPPCQGFSVMG 108
>gi|283834737|ref|ZP_06354478.1| modification methylase HgiDII [Citrobacter youngae ATCC 29220]
gi|291068977|gb|EFE07086.1| modification methylase HgiDII [Citrobacter youngae ATCC 29220]
Length = 351
Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
+K+ D FCG GG E + + + + +Y+ANFPNT
Sbjct: 1 MKVIDFFCGCGGASKGFELA----GFDIALGIDFDKSAADSYKANFPNTAFINSDIRNVR 56
Query: 55 --DIAKIKTQDIPDHDVLLAGFPCQPFS 80
DIA+I + + A PCQPFS
Sbjct: 57 VRDIAEIVPDWKENDLIFCACAPCQPFS 84
>gi|328544214|ref|YP_004304323.1| Modification methylase DdeI [polymorphum gilvum SL003B-26A1]
gi|326413956|gb|ADZ71019.1| Modification methylase DdeI [Polymorphum gilvum SL003B-26A1]
Length = 480
Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 34/103 (33%), Gaps = 26/103 (25%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K DLF G GG+ L L + F+ E + + +T+ NF +
Sbjct: 45 KFVDLFSGCGGLSLGLSLA----GMRGLFAIERDDMAFETFSTNFIGDDSPEAYRFMWPS 100
Query: 63 D----------------------IPDHDVLLAGFPCQPFSQAG 83
+ +VL G PCQ FS AG
Sbjct: 101 WLDQRAWGIDEVLGEHKEQLEQLRGEVEVLAGGPPCQGFSFAG 143
>gi|222053814|ref|YP_002536176.1| DNA-cytosine methyltransferase [Geobacter sp. FRC-32]
gi|221563103|gb|ACM19075.1| DNA-cytosine methyltransferase [Geobacter sp. FRC-32]
Length = 381
Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--GDIAK 58
M + F G G R+ L + EC F+++ +P +Y+ F F D+AK
Sbjct: 1 MKTFYEFFAGGGMARIGL-----GKGWECVFANDFDPKKAISYRTYFRGNDHFVVEDVAK 55
Query: 59 IKTQDI-PDHDVLLAGFPCQPFSQAG 83
I+T + D+ A FPCQ S AG
Sbjct: 56 IQTSQLLGTADLTWASFPCQDLSLAG 81
>gi|157953886|ref|YP_001498777.1| hypothetical protein AR158_C696R [Paramecium bursaria Chlorella
virus AR158]
gi|156068534|gb|ABU44241.1| hypothetical protein AR158_C696R [Paramecium bursaria Chlorella
virus AR158]
Length = 362
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV-ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
LK +LF GI GI L R E EIN + + FP+ +F D+ K
Sbjct: 3 LKALELFAGIAGITHGL------RGFVEPMAFVEINKDAQEFLSTKFPDKPVFDDVTKFS 56
Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83
+D D++ GFPC FS AG
Sbjct: 57 KRDFDEPIDMITGGFPCTGFSIAG 80
>gi|327535475|gb|AEA94309.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis OG1RF]
Length = 363
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV---ECFFSSEINPYSVKTYQANFPNTLI----FG 54
K+ +LFCG GGI L + + + + ++++ + + +TY N
Sbjct: 3 FKLGELFCGPGGIALGAMTSQSDDGIYKIDHAWANDFDKDTCQTYINNICPEKPETVICE 62
Query: 55 DIAKIKTQDIPDH---DVLLAGFPCQPFSQAG 83
DI K+ + + D L GFPC FS G
Sbjct: 63 DIRKLDFRKLKRISDIDGLAFGFPCNDFSIVG 94
>gi|144952808|gb|ABP04058.1| DNA methyltransferase 2 [Macrobrachium rosenbergii]
Length = 396
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--KI 59
L+I +L+ GIGG+R+ +++ + S EIN +++ YQ NFP T +I +
Sbjct: 10 LRILELYSGIGGMRVAAKESGLQ--FDIVGSYEINTTALEVYQHNFPKTPKAYNIMGLTL 67
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ DV++ PCQPF++ G
Sbjct: 68 DHLESLSPDVIMMSPPCQPFTRQG 91
>gi|290343528|ref|YP_003494895.1| hypothetical protein OTV1_055 [Ostreococcus tauri virus 1]
gi|260160943|emb|CAY39643.1| hypothetical protein OTV1_055 [Ostreococcus tauri virus 1]
Length = 351
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 9/86 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIKT 61
LF G GG L + V+ SE+ + + LI GDI KI
Sbjct: 7 TALSLFSGCGGDTLGMVNA----GVDVVAYSELKTKFQETHELNFKNSKLIGGDINKITD 62
Query: 62 QDI----PDHDVLLAGFPCQPFSQAG 83
+D D++ GFPCQ FS AG
Sbjct: 63 EDFEKLSGKIDIIFGGFPCQSFSNAG 88
>gi|86559667|ref|YP_473487.1| cytosine methyltransferase [Clostridium perfringens]
gi|86475939|dbj|BAE79114.1| cytosine methyltransferase [Clostridium perfringens]
Length = 314
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59
+K+ LF GIG +E + E E + Y+ Y F D+ +
Sbjct: 1 MKVLGLFSGIGAFERAIEN--KNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVNWV 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D D++ GFPC S AG
Sbjct: 59 DGTHFKDIDLITYGFPCTDISLAG 82
>gi|86559571|ref|YP_473392.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens CPE
str. F4969]
gi|168215006|ref|ZP_02640631.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens CPE
str. F4969]
gi|86475843|dbj|BAE79019.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens]
gi|94958361|gb|ABF47322.1| Dcm [Clostridium perfringens]
gi|170713579|gb|EDT25761.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens CPE
str. F4969]
Length = 339
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59
+K+ LF GIG +E + E E + Y+ Y F D+ +
Sbjct: 1 MKVLGLFSGIGAFERAIEN--KNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVNWV 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D D++ GFPC S AG
Sbjct: 59 DGTHFKDIDLITYGFPCTDISLAG 82
>gi|83859006|ref|ZP_00952527.1| C-5 cytosine-specific DNA methylase [Oceanicaulis alexandrii
HTCC2633]
gi|83852453|gb|EAP90306.1| C-5 cytosine-specific DNA methylase [Oceanicaulis alexandrii
HTCC2633]
Length = 363
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 10/85 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLFCG GG+ + + + ++ N I D+AK+
Sbjct: 23 TVVDLFCGAGGLSHGFH----SEGFDIVGGIDTDEACRYAFEHNNDAPFIRRDVAKLTGP 78
Query: 63 D------IPDHDVLLAGFPCQPFSQ 81
+ VL+ PCQPFS
Sbjct: 79 EIEGLFIPGKRRVLVGCAPCQPFST 103
>gi|168210881|ref|ZP_02636506.1| Dcm [Clostridium perfringens B str. ATCC 3626]
gi|209947599|ref|YP_002291106.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens]
gi|170711042|gb|EDT23224.1| Dcm [Clostridium perfringens B str. ATCC 3626]
gi|209910390|dbj|BAG75479.1| C-5 cytosine-specific DNA methylase [Clostridium perfringens]
Length = 339
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59
+K+ LF GIG +E + E E + Y+ Y F D+ +
Sbjct: 1 MKVLSLFSGIGAFERAIEN--KNIEHEIVNYCEKDRYASYAYSKLFRLSEAKNLWDVNWV 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D D++ GFPC S AG
Sbjct: 59 DGTQFKDIDLVTYGFPCVDISLAG 82
>gi|258514794|ref|YP_003191016.1| DNA-cytosine methyltransferase [Desulfotomaculum acetoxidans DSM
771]
gi|257778499|gb|ACV62393.1| DNA-cytosine methyltransferase [Desulfotomaculum acetoxidans DSM
771]
Length = 402
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 31/92 (33%), Gaps = 13/92 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M +LF G GG+ L L+ + E + S +AN +
Sbjct: 1 MYSSIELFSGTGGLALGLQ----KSGFDHRALLEWDKDSCDNIKANIERGFPLVQNWNVI 56
Query: 61 TQDIPDHD---------VLLAGFPCQPFSQAG 83
D+ ++ G PCQPFS G
Sbjct: 57 QTDVKLVHYDDFGEGIKLVAGGPPCQPFSLGG 88
>gi|91203606|emb|CAJ71259.1| similar to HhaI Dna (cytosine-C5-)-methyltransferase [Candidatus
Kuenenia stuttgartiensis]
Length = 416
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 35/127 (27%), Gaps = 49/127 (38%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV------KTYQANFPNTLIFGD 55
++ DLF G GG ++ E E++P + +Y N
Sbjct: 1 MRYIDLFAGAGGFSEGFKRA----GFEPVAFVEVDPAACFTLKTRHSYHYLKENNKSDIY 56
Query: 56 IAKIKTQDI---------------------------------------PDHDVLLAGFPC 76
I +K + D DV++ G PC
Sbjct: 57 IKYLKGEINREQLYSIVPSHILESVINLSISDENNSKIFQIVEKLIGRKDIDVIVGGPPC 116
Query: 77 QPFSQAG 83
Q +S G
Sbjct: 117 QAYSLVG 123
>gi|29566291|ref|NP_817858.1| gp7 [Mycobacterium phage Corndog]
gi|29425016|gb|AAN01939.1| gp7 [Mycobacterium phage Corndog]
Length = 196
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 7/85 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61
+I LF G G + +EQ + E + + +P GD+ ++
Sbjct: 8 RIGSLFSGSGMLDRAVEQA---TGGRVVWHCENDRAAKLVLAERWPGVPNLGDVRRVNWS 64
Query: 62 ---QDIPDHDVLLAGFPCQPFSQAG 83
+ D+L GFPC S AG
Sbjct: 65 RIRWSLGPVDILCGGFPCTDISPAG 89
>gi|270265139|ref|ZP_06193402.1| hypothetical protein SOD_k01780 [Serratia odorifera 4Rx13]
gi|270041073|gb|EFA14174.1| hypothetical protein SOD_k01780 [Serratia odorifera 4Rx13]
Length = 350
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 32/89 (35%), Gaps = 13/89 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---------I 52
DLFCG GG+ L+ + E+ + TY+ N P+ +
Sbjct: 3 FSAIDLFCGAGGLTCGLKDA----GFKVLAGVEVEAVAADTYRTNHPDHVLYEADIRTLD 58
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
I + D D+L PCQ FS
Sbjct: 59 PQKIMQELHLQPGDLDLLAGCPPCQGFST 87
>gi|270307689|ref|YP_003329747.1| DNA-cytosine methyltransferase [Dehalococcoides sp. VS]
gi|270153581|gb|ACZ61419.1| DNA-cytosine methyltransferase [Dehalococcoides sp. VS]
Length = 365
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63
DLFCG GG+ + L++ + + +P ++ TY++N + + DI K+K
Sbjct: 20 IDLFCGCGGLTVGLKRA----GFRVIGAVDNDPIAITTYRSNHRDVKVWKKDITKLKIDT 75
Query: 64 IPDH--------DVLLAGFPCQPFS 80
+ D++ PCQ F+
Sbjct: 76 VKKRLKLRKGELDLVAGCPPCQGFT 100
>gi|254039141|ref|ZP_04873191.1| DNA-cytosine methyltransferase [Escherichia sp. 1_1_43]
gi|226838577|gb|EEH70606.1| DNA-cytosine methyltransferase [Escherichia sp. 1_1_43]
Length = 349
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 10/86 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI- 59
M+K+ DLFCG GG+ L+ + +I+ Y+ N + + + I
Sbjct: 1 MIKVVDLFCGAGGLTHGLQ----KSGLNVVAGYDIDAACRFAYETNNKSLFVQKSVTDIE 56
Query: 60 -----KTQDIPDHDVLLAGFPCQPFS 80
K + VL PCQPFS
Sbjct: 57 DGELVKYFEGAKVRVLAGCAPCQPFS 82
>gi|285017024|ref|YP_003374735.1| DNA (cytosine-5-)-methyltransferase [Xanthomonas albilineans GPE
PC73]
gi|283472242|emb|CBA14748.1| putative dna (cytosine-5-)-methyltransferase protein [Xanthomonas
albilineans]
Length = 429
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+++ LF G+ + EC +EI+ + + P+ G++ +I
Sbjct: 15 VMRYLSLFSGL----EAAHLALSPLGWECVGVAEIDAAACALLRHRLPHVPNLGNVTEIT 70
Query: 61 TQ---DIPDHDVLLAGFPCQPFSQAG 83
+ DV++ G PCQ S AG
Sbjct: 71 DAVIAQLGAIDVVIGGSPCQDLSVAG 96
>gi|291618481|ref|YP_003521223.1| Bsp6IM [Pantoea ananatis LMG 20103]
gi|291153511|gb|ADD78095.1| Bsp6IM [Pantoea ananatis LMG 20103]
Length = 384
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIKT 61
+ F GIG R +EQ ++ ++++ + + DI +K+
Sbjct: 13 TALEFFAGIGLARAGMEQA----GIKTVWANDYDVNKKAMYEGHWQSADFLLADIHSLKS 68
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+++PD DV A PC S AG
Sbjct: 69 EELPDADVAWASSPCTDLSLAG 90
>gi|227112465|ref|ZP_03826121.1| putative C-5 cytosine-specific DNA methylase [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 390
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 22/97 (22%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----------PNTLI 52
K DLF G GG L + V+ + E + + +TY+ NF +
Sbjct: 4 KAIDLFAGAGGFTLSAIEA----GVDVIAAVEFDKSAAETYRKNFIEGKKRKIELRSGPQ 59
Query: 53 FGDIAKIKTQD--------IPDHDVLLAGFPCQPFSQ 81
GDI I + + D++L G PCQ FS
Sbjct: 60 KGDINNITPLELRQSLELERGELDIILGGPPCQGFST 96
>gi|86747598|ref|YP_484094.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2]
gi|86570626|gb|ABD05183.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2]
Length = 390
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI LF GIGG+ L L + E SEI + + F GD+A + +
Sbjct: 1 MKIAGLFAGIGGLELGLHRA----GHETVILSEIWQPAGAVLEHRFKGAPNVGDVATLTS 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ +++ AGFPCQ SQAG
Sbjct: 57 L-PSEVELMTAGFPCQDLSQAG 77
>gi|227539355|ref|ZP_03969404.1| possible DNA (cytosine-5-)-methyltransferase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227240668|gb|EEI90683.1| possible DNA (cytosine-5-)-methyltransferase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 386
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 25/101 (24%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-------- 55
+ + G G + + E+ E +++E + K + A +
Sbjct: 11 VLSFYSGGGFMDMGFEKA----GFEIVWTNEFDKVFAKLHAAGITSWRKSRGNGIKAEIF 66
Query: 56 -------------IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + P+H ++ G PCQ FS G
Sbjct: 67 NTKSITDVKSNEIIEEAFPNGKPEHFGIIGGPPCQDFSMNG 107
>gi|281181375|dbj|BAI57705.1| cytosine specific DNA methyltransferase [Escherichia coli SE15]
gi|315288374|gb|EFU47772.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 110-3]
Length = 398
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 34/93 (36%), Gaps = 17/93 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53
+K DLF G GG L T ++ + E + + TY+ N L
Sbjct: 1 MKAIDLFAGAGGFSLSAHNTGA---IDVVAAIEFDSAAANTYRKNMLERLEHKTELLQED 57
Query: 54 ------GDIAKIKTQDIPDHDVLLAGFPCQPFS 80
+ K + D++L G PCQ FS
Sbjct: 58 ILLVGPKKLRKKIKLKKGELDMILGGPPCQGFS 90
>gi|295104578|emb|CBL02122.1| DNA-methyltransferase (dcm) [Faecalibacterium prausnitzii SL3/3]
Length = 293
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 11 IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVL 70
IGG L + ++ + +++EINP + KTY+ NF N ++ GDI++ D++
Sbjct: 6 IGGFDF-LGKHYSKTGFKIIWANEINPAACKTYRDNFGNYIVEGDISEKINTIPASADIV 64
Query: 71 LAGFPCQPFSQAG 83
+ GFPCQ S G
Sbjct: 65 VGGFPCQDISING 77
>gi|462647|sp|P34905|MTB1_BREBE RecName: Full=Modification methylase BbvI; Short=M.BbvI; AltName:
Full=Cytosine-specific methyltransferase BbvI
Length = 374
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 15/97 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQT-------FNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54
+ +LFCG GG+ L ++ E ++++I+ ++ +T++ N
Sbjct: 3 FRKGELFCGPGGLALGAKEAKYMHPETGEVFEFEHAWANDIDEWACETFRTNICPDRPDS 62
Query: 55 DIAKIK--------TQDIPDHDVLLAGFPCQPFSQAG 83
+ + + D GFPC +S G
Sbjct: 63 VVCGDVRELDIKSLGEKFGEIDAFTFGFPCNDYSIVG 99
>gi|303245411|ref|ZP_07331695.1| DNA-cytosine methyltransferase [Desulfovibrio fructosovorans JJ]
gi|302493260|gb|EFL53122.1| DNA-cytosine methyltransferase [Desulfovibrio fructosovorans JJ]
Length = 490
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 23/100 (23%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------------ 50
++ DLF G GGI L E + E++P + ++ NF
Sbjct: 19 RVLDLFAGCGGISLGFRTA----GYELRAAIEMDPVAAASHALNFYPDLEGEDKKRHAQS 74
Query: 51 -------LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + DV++ G PCQ F++ G
Sbjct: 75 RDIVKTEPHSFMLEMGCPEPEEAIDVVVGGPPCQAFARVG 114
>gi|294673126|ref|YP_003573742.1| C-5 cytosine-specific family DNA methylase [Prevotella ruminicola
23]
gi|294473536|gb|ADE82925.1| DNA methylase, C-5 cytosine-specific family [Prevotella
ruminicola 23]
Length = 342
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKT 61
KI +F G+GGI + F+++ + +++AN+P+ ++ IA +
Sbjct: 4 KIVSIFSGVGGIDTGFSHA----GFQTVFANDNWQNACDSFKANYPDAEVVCASIADVDF 59
Query: 62 QD----IPDHDVLLAGFPCQPFSQ 81
++ D D L+ G PC PFS+
Sbjct: 60 KEIKKKYGDIDGLVGGPPCPPFSK 83
>gi|15897209|ref|NP_341814.1| DNA modification methylase, type II R/M system [Sulfolobus
solfataricus P2]
gi|284174455|ref|ZP_06388424.1| DNA modification methylase, type II R/M system [Sulfolobus
solfataricus 98/2]
gi|13813404|gb|AAK40604.1| DNA modification methylase, type II R/M system [Sulfolobus
solfataricus P2]
gi|261601877|gb|ACX91480.1| DNA-cytosine methyltransferase [Sulfolobus solfataricus 98/2]
Length = 325
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKI 59
++KI DLF G GG L +E + +IN + +I DI +I
Sbjct: 3 LIKIIDLFSGAGGFSLGF----KKLGIEPKLAIDINHAATRTYSLNFPNTIVIEDDIREI 58
Query: 60 KTQDI-----PDHDVLLAGFPCQPFSQA 82
+I D DV++ G PC+ ++ A
Sbjct: 59 SGGEILKNVGNDIDVVIGGPPCEGYTAA 86
>gi|302387870|ref|YP_003823692.1| DNA-cytosine methyltransferase [Clostridium saccharolyticum WM1]
gi|302198498|gb|ADL06069.1| DNA-cytosine methyltransferase [Clostridium saccharolyticum WM1]
Length = 569
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 40/114 (35%), Gaps = 36/114 (31%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--------------- 46
+ DLF GIGG R LE++ C EI+ Y+ K+Y A
Sbjct: 1 MTFLDLFAGIGGFRRGLERS----GHTCVGHVEIDKYANKSYMAMYELAPCPYREDAGSN 56
Query: 47 -----------------FPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI +I+ +IP ++ GFPC S AG
Sbjct: 57 FSMMCKPEVRKNCDGKNCTGEWYAKDIKQIRAGEIPKAEIWTFGFPCTDISIAG 110
>gi|228473386|ref|ZP_04058140.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga
gingivalis ATCC 33624]
gi|228275288|gb|EEK14086.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga
gingivalis ATCC 33624]
Length = 358
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI 59
ML D+F G GG+ L E ++ + EINP + K++ N + GDI I
Sbjct: 1 MLYGIDIFSGAGGLSLGAEMA----GIQICYGIEINPSAAKSFTRNHKGAKVLQGDIKDI 56
Query: 60 KTQDIP----DHDVLLAGFPCQPFSQ 81
+ +++ G PCQ FS
Sbjct: 57 DPSKLKEGIDPVFIIMGGPPCQGFSL 82
>gi|167462714|ref|ZP_02327803.1| possible DNA (cytosine-5-)-methyltransferase [Paenibacillus
larvae subsp. larvae BRL-230010]
gi|322382689|ref|ZP_08056545.1| DNA-methyltransferase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321153341|gb|EFX45773.1| DNA-methyltransferase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 260
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K LF GIGGI L + +E E + K + ++PNT I+ D+ +
Sbjct: 1 MKKLSLFSGIGGIDLAAKWA----GIETVAFCEKEHFPQKVLRRHWPNTPIYDDVCTLTR 56
Query: 62 Q---------DIPDHDVLLAGFPCQPFSQAG 83
+ D++ AG+PCQ S AG
Sbjct: 57 EVLERDGIIGTGRTIDLISAGYPCQGESYAG 87
>gi|198430517|ref|XP_002128135.1| PREDICTED: similar to DNA methyltransferase 2 [Ciona
intestinalis]
Length = 343
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV-KTYQANFPNTLIFGDIAKI- 59
LK+ +L+ GIGG+ L N +N E S +I+P + I
Sbjct: 5 LKVLELYSGIGGMHYALLGA-NLKNCEVVCSVDISPAASLVYKHNFPGTKHWERSIEGFS 63
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83
K D + L+ PCQPF++ G
Sbjct: 64 AKDFDNMGFNTLMMSPPCQPFTRVG 88
>gi|291515626|emb|CBK64836.1| DNA-methyltransferase (dcm) [Alistipes shahii WAL 8301]
Length = 360
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 10/85 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ DLFCGIGG+ + + +++ Y+ N I+ DI +
Sbjct: 14 IEVIDLFCGIGGLSFGM----KSKGFNILAGYDLDATCRYAYETNNNAKFIYKDIKTVSP 69
Query: 62 QDI------PDHDVLLAGFPCQPFS 80
+I VL PCQPFS
Sbjct: 70 DEIRTAYGKGSIRVLAGCAPCQPFS 94
>gi|228917967|ref|NP_142059.2| modification methylase [Pyrococcus horikoshii OT3]
Length = 312
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLF G GG L + E P + ++ DI + +
Sbjct: 12 VIDLFAGAGGFSLGF----KLSGFRIVSAIESFRPKAETYSINFPEAKVVVRDIKAVNPR 67
Query: 63 DI-PDHDVLLAGFPCQPFS 80
+I DV++ G PC+PF+
Sbjct: 68 EIAEKVDVIIGGPPCEPFT 86
>gi|170757755|ref|YP_001781752.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1
str. Okra]
gi|169122967|gb|ACA46803.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1
str. Okra]
Length = 561
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAK 58
MLK+ LF GIG L+ E E++ Y+VK+Y + + DI K
Sbjct: 1 MLKVRTLFSGIGSPERALKDL--QIPYELVDFCEVDKYAVKSYCSVHGVSEEKNLGDITK 58
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +++P D+L+ GFPC S AG
Sbjct: 59 VWGRNLPYADLLVWGFPCPDISVAG 83
>gi|144575557|gb|AAZ53977.2| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae
7448]
Length = 339
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 33/95 (34%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
DLF G GG+ L S +I +V+TY NF ++
Sbjct: 15 YNFIDLFSGAGGLSCGLVMA----GFLPLASLKIMKQAVETYAYNFKKRSKNKELFKLGD 70
Query: 57 --------AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D++ GFPCQ FS AG
Sbjct: 71 IRDSKIKSEFYDHFKDQELDLIAGGFPCQGFSMAG 105
>gi|9632187|ref|NP_049039.1| hypothetical protein PBCV1_A683L [Paramecium bursaria Chlorella
virus 1]
gi|2447129|gb|AAC96987.1| nonfunctional M.CviAV cytosine DNA methyltransferase [Paramecium
bursaria Chlorella virus 1]
Length = 367
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ +LF GI GI L EIN + K + F + +F D+ K
Sbjct: 3 FRTLELFAGIAGISHGLRGIS-----TPVAFVEINEDAQKFLKTKFSDASVFNDVTKFTK 57
Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83
D P+ D++ AGFPC FS AG
Sbjct: 58 SDFPEDIDMITAGFPCTGFSIAG 80
>gi|330802352|ref|XP_003289182.1| hypothetical protein DICPUDRAFT_153508 [Dictyostelium purpureum]
gi|325080758|gb|EGC34300.1| hypothetical protein DICPUDRAFT_153508 [Dictyostelium purpureum]
Length = 378
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--KI 59
L++ + + GIGG+ L+++ E S +IN ++ Y+ F +I +
Sbjct: 18 LRVLEFYSGIGGMHYGLKESG--VKFEVVQSFDINTNAILNYKYTFNENTSQKNIESLTV 75
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D + L PCQPF+++G
Sbjct: 76 EEIDNFKSNAWLMSPPCQPFTRSG 99
>gi|157112484|ref|XP_001657555.1| DNA (cytosine-5)-methyltransferase [Aedes aegypti]
gi|108878059|gb|EAT42284.1| DNA (cytosine-5)-methyltransferase [Aedes aegypti]
Length = 344
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
++ +LF GIGG+ +E++ + + +INP + N +I +
Sbjct: 15 YQVLELFSGIGGMHFAIERSGKR--YKVVSAIDINPVANAIYNHNFGANKASNSNILSLT 72
Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83
I +V+L PCQPFS+ G
Sbjct: 73 PDRIQKLGVNVILMSPPCQPFSRNG 97
>gi|46579926|ref|YP_010734.1| type II DNA modification methyltransferase [Desulfovibrio
vulgaris str. Hildenborough]
gi|46449342|gb|AAS95993.1| type II DNA modification methyltransferase, putative
[Desulfovibrio vulgaris str. Hildenborough]
Length = 487
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-K 60
++ + GI ++ +EI P+ +FPN GD I
Sbjct: 1 MRYISICSGI----EAATVAWHPLGWHPVAFAEIEPFPCAVLAHHFPNVPNLGDFTTIVM 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
Q D+++ G PCQ FS AG
Sbjct: 57 EQYRGTVDLVVGGTPCQAFSVAG 79
>gi|311977248|gb|ADQ20503.1| M.BbvI [Brevibacillus brevis]
Length = 367
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 15/97 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQT-------FNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54
+ +LFCG GG+ L ++ E ++++I+ ++ +T++ N
Sbjct: 3 FRKGELFCGPGGLALGAKEAKYMHPETGEVFEFEHAWANDIDEWACETFRTNICPDRPDS 62
Query: 55 DIAKIK--------TQDIPDHDVLLAGFPCQPFSQAG 83
+ + + D GFPC +S G
Sbjct: 63 VVCGDVRELDIKSLGEKFGEIDAFTFGFPCNDYSIVG 99
>gi|210630626|ref|ZP_03296529.1| hypothetical protein COLSTE_00414 [Collinsella stercoris DSM 13279]
gi|210160401|gb|EEA91372.1| hypothetical protein COLSTE_00414 [Collinsella stercoris DSM 13279]
Length = 402
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 17/92 (18%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----- 58
DLF G GG+ L + S++I P +KT+ AN I GDI+
Sbjct: 140 FIDLFAGAGGLALGFVWA----GWQPVVSNDIVPDFLKTHAANIDGATICGDISDPEILN 195
Query: 59 --------IKTQDIPDHDVLLAGFPCQPFSQA 82
+ + +L G PCQ FS A
Sbjct: 196 SICDAAAKFRKDNPDSPLFVLGGPPCQGFSTA 227
>gi|266622011|ref|ZP_06114946.1| site-specific DNA-methyltransferase [Clostridium hathewayi DSM
13479]
gi|288866294|gb|EFC98592.1| site-specific DNA-methyltransferase [Clostridium hathewayi DSM
13479]
Length = 298
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
L LF GIGGI L E E Y + ++P F DI
Sbjct: 4 LTHFSLFTGIGGIDLAAEAA----GFTTVCQCEWADYPTAVLEKHWPLVPRFRDITTVTK 59
Query: 58 --KIKTQDIPDHDVLLAGFPCQPFSQAG 83
I+ + +L GFPCQPFS G
Sbjct: 60 EAFIEKTGRKEITLLSGGFPCQPFSSVG 87
>gi|331003101|ref|ZP_08326612.1| hypothetical protein HMPREF0491_01474 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412985|gb|EGG92361.1| hypothetical protein HMPREF0491_01474 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 356
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 1 MLKIT--DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIA 57
M I DLF G GG L++ ++ + EI+ ++ +TY+ N P + DI
Sbjct: 1 MKNIIAVDLFSGAGGTTSGLKKA----GIKVAVAVEIDKWAAQTYRHNNPEVVLFEADIR 56
Query: 58 KIKTQDIPDHD--------VLLAGFPCQPFSQAG 83
I ++I D+ +L+A PCQ FS G
Sbjct: 57 DISGKEIIDNISLKSSDKLLLVACPPCQGFSTIG 90
>gi|311234076|gb|ADP86930.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
Length = 489
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-K 60
++ + GI ++ +EI P+ +FPN GD I
Sbjct: 3 MRYISICSGI----EAATVAWHPLGWHPVAFAEIEPFPCAVLAHHFPNVPNLGDFTTIVM 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
Q D+++ G PCQ FS AG
Sbjct: 59 EQYRGTVDLVVGGTPCQAFSVAG 81
>gi|153932387|ref|YP_001385110.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. ATCC 19397]
gi|153937602|ref|YP_001388579.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. Hall]
gi|152928431|gb|ABS33931.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. ATCC 19397]
gi|152933516|gb|ABS39015.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. Hall]
Length = 350
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECF--FSSEINPYSVKTYQANFPNTLI----F 53
+ ++ +LFCG GG+ + + + ++++ + + TY N
Sbjct: 2 IFQLGELFCGPGGLGYGAKTAEIKNNKYKIVHKWANDYDRDTCDTYIHNICPDDPESVIC 61
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ K+ + D L GFPC FS G
Sbjct: 62 QDVRKLDIDSLESIDALAFGFPCNDFSVVG 91
>gi|289423000|ref|ZP_06424820.1| modification methylase ScrFIB [Peptostreptococcus anaerobius
653-L]
gi|289156574|gb|EFD05219.1| modification methylase ScrFIB [Peptostreptococcus anaerobius
653-L]
Length = 329
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI +LF GIG IR + + EI+ VK+Y A + I
Sbjct: 18 IKIIELFGGIGAIRKAFIR--QKIPHQVIDYVEIDKNCVKSYNALYNTNFKPKSILYFHP 75
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D D+L+ G PCQ FS++G
Sbjct: 76 PDEKI-DLLMHGSPCQDFSRSG 96
>gi|400287|sp|P31033|MTM4_NEIGO RecName: Full=Modification methylase NgoMIV; Short=M.NgoMIV;
AltName: Full=Cytosine-specific methyltransferase
NgoMIV
Length = 312
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
++ G GG L LE+ EI P + +T + +I GD+ +
Sbjct: 3 FTSLEICAGAGGQALGLERA----GFSHVALIEIEPSACQTLRLNRPDWNVIEGDVRLFQ 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ D+L G PC PFS+AG
Sbjct: 59 GEGYDGIDLLAGGVPCPPFSKAG 81
>gi|261339110|ref|ZP_05966968.1| hypothetical protein ENTCAN_05324 [Enterobacter cancerogenus ATCC
35316]
gi|288318947|gb|EFC57885.1| modification methylase HgiDII [Enterobacter cancerogenus ATCC
35316]
Length = 355
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF------- 53
M K DLFCG GG+ L+Q N E + E N + +T++AN +F
Sbjct: 1 MFKAIDLFCGGGGLTEGLKQA----NFEVISAVENNISAAETFKANNRKCHLFQEDIRFI 56
Query: 54 --GDIAKIKTQDIPDHDVLLAGFPCQPFS 80
+I + +L PCQ FS
Sbjct: 57 SSQEIMDKVGIKSGELSLLAGCPPCQGFS 85
>gi|229844460|ref|ZP_04464600.1| modification methylase Bsp6I-like protein [Haemophilus influenzae
6P18H1]
gi|229812709|gb|EEP48398.1| modification methylase Bsp6I-like protein [Haemophilus influenzae
6P18H1]
Length = 387
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--- 57
M + GI + + + + SEI P+ ++PN GD+
Sbjct: 1 MFTYGSICSGI----EAVSVAWKGLG-KPLWFSEIEPFPCAVLAYHYPNIPNLGDMTTLP 55
Query: 58 -KIKTQDIPDHDVLLAGFPCQPFSQAG 83
KI ++IP DVL+ G PCQ FS AG
Sbjct: 56 EKILNREIPAPDVLVGGTPCQAFSVAG 82
>gi|228982443|ref|ZP_04142702.1| Cytosine-specific methyltransferase [Bacillus thuringiensis
Bt407]
gi|228776626|gb|EEM24934.1| Cytosine-specific methyltransferase [Bacillus thuringiensis
Bt407]
Length = 418
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
DLFCG G ++ ++ + NPY+VKTY + DI KI DI
Sbjct: 19 VDLFCGAGVGACGVKLA----GYHMAYAVDNNPYAVKTYNKMIGPHAVLADIRKINPNDI 74
Query: 65 PDHDVLLAGFPCQPFSQAG 83
PDHD ++A C+ FS AG
Sbjct: 75 PDHDFMIATPVCKSFSVAG 93
>gi|206972356|ref|ZP_03233302.1| modification methylase [Bacillus cereus AH1134]
gi|206732681|gb|EDZ49857.1| modification methylase [Bacillus cereus AH1134]
Length = 309
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 2 LKITDLFCG-IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+K+ LF G I G+ L + E S+E+ +VKT + N+ +T+I DI +
Sbjct: 4 IKVGSLFSGAIDGMSLGFQMCSKQ--YEVIISNELEATAVKTAKLNYNHTIIQQDIRNVS 61
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
+ + DV+L FPCQ +S+A
Sbjct: 62 VEAFRECDVILGTFPCQEYSKA 83
>gi|119503900|ref|ZP_01625982.1| putative cytosine-specific methyltransferase [marine gamma
proteobacterium HTCC2080]
gi|119460408|gb|EAW41501.1| putative cytosine-specific methyltransferase [marine gamma
proteobacterium HTCC2080]
Length = 463
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 38/112 (33%), Gaps = 34/112 (30%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY-----------QANFPNT 50
L + DLF G GG+ L +EQ F +E+N + +Y N +
Sbjct: 22 LTMIDLFAGCGGLSLGMEQA----GFTPIFVNELNDDARASYLLNRDFDLKGKPFNQCHE 77
Query: 51 LIFGDIAKI-------------------KTQDIPDHDVLLAGFPCQPFSQAG 83
L DI ++ D++ G PCQ +S G
Sbjct: 78 LHSADIYELTQSRLKQLKKHLLDLGLITDHDSHTSLDLICGGPPCQGYSGIG 129
>gi|300868191|ref|ZP_07112823.1| Cytosine-specific methyltransferase [Oscillatoria sp. PCC 6506]
gi|300333815|emb|CBN58007.1| Cytosine-specific methyltransferase [Oscillatoria sp. PCC 6506]
Length = 395
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 23/98 (23%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAKI-- 59
LF G G+ L LE+ + EI P +VKT N P+ I DI ++
Sbjct: 14 VSLFTGACGLDLGLEKA----GFQTVSLVEIEPDAVKTISLNRPHLSLCAIPRDIREVSA 69
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFSQAG 83
+ + D++ G PCQPFS AG
Sbjct: 70 QTLLKEGGKILGIDRPLRPGEVDLVTGGPPCQPFSTAG 107
>gi|239929797|ref|ZP_04686750.1| putative 5-methylcytosine methyltransferase [Streptomyces
ghanaensis ATCC 14672]
gi|291438128|ref|ZP_06577518.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
gi|291341023|gb|EFE67979.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
Length = 356
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI DLF G GG+ + E+ E + + + + GD+
Sbjct: 5 KIVDLFAGPGGLDVAAEKLGVPT-----VGIEWD-SAACATRRAAGLETVEGDVRLYGPS 58
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
D P+ DVL G PCQ F+ AG
Sbjct: 59 DFPEADVLAGGPPCQTFTVAG 79
>gi|325679553|ref|ZP_08159133.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8]
gi|324108840|gb|EGC03076.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8]
Length = 708
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------- 56
+ DLF G GG +E + + + + N +++T++ N P+T I
Sbjct: 351 VLDLFSGAGGFSYGIE---KNEHFRTAIALDFNEQALQTFKHNMPDTEIVHGDITDSAVK 407
Query: 57 -AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I ++++ G PCQ FS G
Sbjct: 408 ERIISLSKEKKVNMVIGGPPCQGFSLKG 435
>gi|317051620|ref|YP_004112736.1| DNA-cytosine methyltransferase [Desulfurispirillum indicum S5]
gi|316946704|gb|ADU66180.1| DNA-cytosine methyltransferase [Desulfurispirillum indicum S5]
Length = 306
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
+ DLF G+GG + +++ P +VK + N P+T D+ +
Sbjct: 1 MNAIDLFAGLGGWSTGARMA----GIHILWAANHWPEAVKWHAKNHPDTAHACQDLHQAN 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
+ +P HD+LLA CQ S+A
Sbjct: 57 WEQVPSHDILLASPCCQGHSRA 78
>gi|157961098|ref|YP_001501132.1| DNA-cytosine methyltransferase [Shewanella pealeana ATCC 700345]
gi|157846098|gb|ABV86597.1| DNA-cytosine methyltransferase [Shewanella pealeana ATCC 700345]
Length = 406
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 14/90 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--IFGDIAKIKT 61
+ LF G GG+ + L + S EI+ + KT + N P+ GDI K+
Sbjct: 1 MISLFSGAGGLDIGLCEA----GFTNRLSVEIDEDAQKTLKLNQPSLKLATPGDIHKLTP 56
Query: 62 QD--------IPDHDVLLAGFPCQPFSQAG 83
+ + +L G PCQPFS++G
Sbjct: 57 SELLRQSGLQPKELTLLAGGPPCQPFSKSG 86
>gi|316931670|ref|YP_004106652.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1]
gi|315599384|gb|ADU41919.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1]
Length = 390
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI LF G+GG+ L L + + SEI + + F GD+A +K+
Sbjct: 1 MKIAGLFAGVGGLELGLHRA----GHDTLVFSEIWEPAGAVLERRFGGVPNVGDVASLKS 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D D++ AGFPCQ SQAG
Sbjct: 57 L-PADVDLMTAGFPCQDLSQAG 77
>gi|237753192|ref|ZP_04583672.1| cytosine specific DNA methyltransferase [Helicobacter
winghamensis ATCC BAA-430]
gi|229375459|gb|EEO25550.1| cytosine specific DNA methyltransferase [Helicobacter
winghamensis ATCC BAA-430]
Length = 354
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
++ DLFCG GG ++Q + E + + ++ T+ NFP +
Sbjct: 6 FRVLDLFCGAGGFSSGIDQ---NPYFETLLALDFEQSAINTFSHNFPKAQVICGDITDIK 62
Query: 55 -DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
IK ++++ G PCQ FS G
Sbjct: 63 IKNTLIKQAKRLKVNMIIGGPPCQGFSLKG 92
>gi|281420730|ref|ZP_06251729.1| DNA (cytosine-5-)-methyltransferase [Prevotella copri DSM 18205]
gi|281405022|gb|EFB35702.1| DNA (cytosine-5-)-methyltransferase [Prevotella copri DSM 18205]
Length = 432
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 5/84 (5%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKIK 60
+I LF GIG I ++ N + F+ +I P F DI +
Sbjct: 58 RIGTLFSGIGAIEHAFQRLG--LNHKIVFAGDIEPKCKISYFANYKINEEDWFTDIREFD 115
Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83
D ++ G PCQ FS G
Sbjct: 116 ATKYKGKVDFIVGGAPCQAFSMVG 139
>gi|328471744|gb|EGF42621.1| putative C-5 cytosine-specific DNA methylase [Vibrio
parahaemolyticus 10329]
Length = 392
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 19/95 (20%)
Query: 1 ML-KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIF 53
ML K DLF G GG L ++ +E + E++ + +TYQ+N +++
Sbjct: 1 MLHKAIDLFSGAGGFSL----AAHNLGLEIVAAIELDKTASQTYQSNLVERLGQKTSILN 56
Query: 54 GDIAKIKTQD--------IPDHDVLLAGFPCQPFS 80
DI I ++ I + ++L G PCQ FS
Sbjct: 57 EDILSIDPEELRKSLGINIGELSIILGGPPCQGFS 91
>gi|281420197|ref|ZP_06251196.1| modification methylase HgiDII [Prevotella copri DSM 18205]
gi|281405692|gb|EFB36372.1| modification methylase HgiDII [Prevotella copri DSM 18205]
Length = 353
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 16/92 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
K D FCG GG+ L L Q + +S +I ++ T +AN DI
Sbjct: 5 YKCIDCFCGAGGLCLGLIQA----GFDILYSFDIEAKAIATIKANPEYFKNHKAETRDIY 60
Query: 58 KIKTQD--------IPDHDVLLAGFPCQPFSQ 81
++T + + D+L G PCQ FS
Sbjct: 61 DVETAELLKSLNLKSGELDLLAGGPPCQGFSV 92
>gi|144900416|emb|CAM77280.1| modification methylase MthTI [Magnetospirillum gryphiswaldense
MSR-1]
Length = 356
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
F GG ++ + +E + ++ N + I +
Sbjct: 20 FTFASFFACAGGADFGMKAA----GANPVYVNEFRRSVAELHRLNHGFPVDTRSITETGV 75
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D ++L GFPCQPFS+AG
Sbjct: 76 TDYGSPTIMLGGFPCQPFSKAG 97
>gi|30523050|gb|AAP31838.1| AsiSI methylase [Arthrobacter sp. S]
Length = 390
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 31/90 (34%), Gaps = 13/90 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+LF G GG+ L + + N S+ Y N + +
Sbjct: 5 TAVELFAGCGGLSTGLLDA----GYDVRLGVDNNAPSLVAYDYNHAYRGSKSLLRDVSAL 60
Query: 63 DIPD---------HDVLLAGFPCQPFSQAG 83
P+ DVL G PCQPFS AG
Sbjct: 61 RGPELLEAAGVDSIDVLSGGPPCQPFSIAG 90
>gi|155370467|ref|YP_001426001.1| hypothetical protein FR483_N369L [Paramecium bursaria Chlorella
virus FR483]
gi|155123787|gb|ABT15654.1| hypothetical protein FR483_N369L [Paramecium bursaria Chlorella
virus FR483]
Length = 342
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML DLF GIGGI L VE E N + PN +F D+
Sbjct: 1 MLHAIDLFSGIGGITHGLRGI-----VEPVAYVEKNDDARGFLAQKHPNVPVFDDVCTFD 55
Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83
D++ G+PC FS AG
Sbjct: 56 ATPYLGKVDIITGGWPCTGFSTAG 79
>gi|39933426|ref|NP_945702.1| site-specific DNA-methyltransferase [Rhodopseudomonas palustris
CGA009]
gi|192288783|ref|YP_001989388.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1]
gi|39647272|emb|CAE25793.1| possible site-specific DNA-methyltransferase [Rhodopseudomonas
palustris CGA009]
gi|192282532|gb|ACE98912.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1]
Length = 390
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF G+GG+ L L + + SEI + + F GD+A +K+
Sbjct: 1 MKVAGLFAGVGGLELGLHRA----GHDTLVFSEIWDPAGAVLERRFGGVPNVGDVASLKS 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D D++ AGFPCQ SQAG
Sbjct: 57 L-PADVDLMTAGFPCQDLSQAG 77
>gi|15920534|ref|NP_376203.1| modification methylase [Sulfolobus tokodaii str. 7]
gi|15621317|dbj|BAB65312.1| 322aa long hypothetical modification methylase [Sulfolobus
tokodaii str. 7]
Length = 322
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62
+ DLF G GG L + F+ +IN + +TY NFP T +I DI I +
Sbjct: 5 VVDLFSGAGGFSLGF----KKLGFDIRFAIDINHAAARTYATNFPTTLVIEDDIRNITGR 60
Query: 63 DIPD-----HDVLLAGFPCQPFSQA 82
DI D+++ PC+P++ A
Sbjct: 61 DIEYLIGRKVDIVIGSPPCEPYTGA 85
>gi|312889577|ref|ZP_07749127.1| C-5 cytosine-specific DNA methylase [Mucilaginibacter paludis DSM
18603]
gi|311297925|gb|EFQ75044.1| C-5 cytosine-specific DNA methylase [Mucilaginibacter paludis DSM
18603]
Length = 79
Score = 63.4 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML LF GIGG + + FS E +P+ K + +P T + DI +
Sbjct: 1 MLTHASLFSGIGGFDMAATW----KGWYNIFSCEKDPFCRKILKFYWPQTEQYEDIHQFD 56
Query: 61 -TQDIPDHDVLLAGFPCQPFSQA 82
T ++L GFPCQPFS A
Sbjct: 57 ATPYRGSINILSGGFPCQPFSSA 79
>gi|110834520|ref|YP_693379.1| C-5 cytosine-specific DNA methylase family protein [Alcanivorax
borkumensis SK2]
gi|110647631|emb|CAL17107.1| C-5 cytosine-specific DNA methylase family protein [Alcanivorax
borkumensis SK2]
Length = 308
Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
LF G GG L Q + +++I PY+ Y ANFP T I + Q P
Sbjct: 2 SLFTGCGGSDSGLHQA----GYDVLMANDILPYAKDFYLANFPETDYQV-IDVREIQSFP 56
Query: 66 DHDVLLAGFPCQPFSQAG 83
DVL+ +PCQ FSQ G
Sbjct: 57 SADVLVGCYPCQGFSQGG 74
>gi|284046510|ref|YP_003396850.1| DNA-cytosine methyltransferase [Conexibacter woesei DSM 14684]
gi|283950731|gb|ADB53475.1| DNA-cytosine methyltransferase [Conexibacter woesei DSM 14684]
Length = 424
Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 12/88 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--------IF 53
L DLFCG GG+ L + +++ +P + TY+ NFP T+
Sbjct: 7 LTAVDLFCGAGGLSQGLADA----GMHVVAAADHDPDACATYRRNFPRTVLVEGDLTSRE 62
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
A + D D+L G PCQ +SQ
Sbjct: 63 KHEALLDALQGSDLDLLAGGPPCQAYSQ 90
>gi|179506952|gb|ACB86652.1| EagI methylase [Pantoea agglomerans]
Length = 401
Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 13/89 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIK 60
+ DLF G GG+ L+ + F++E+ P Y+ + + ++ GDI I
Sbjct: 5 MISLDLFAGAGGLTCGLDMA----GFQSIFANELVPVYAETYSKNHPNAEMVVGDIRAIA 60
Query: 61 TQD--------IPDHDVLLAGFPCQPFSQ 81
+ + D+L G PCQ FS
Sbjct: 61 ESNLMKSLGLKAGELDLLAGGPPCQGFSI 89
>gi|209883303|ref|YP_002287160.1| C-5 cytosine-specific DNA methylase [Oligotropha carboxidovorans
OM5]
gi|209871499|gb|ACI91295.1| C-5 cytosine-specific DNA methylase [Oligotropha carboxidovorans
OM5]
Length = 562
Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DL+ G+GG L L ++ S E++ ++ KT N + DI KI
Sbjct: 8 ITAIDLYSGVGGWSLGLRLA----GIDVIASYELSEFANKTNDLNNSHPTSTVDIRKIDL 63
Query: 62 QDIPDH-DVLLAGFPCQPFSQA 82
+ +P + DV++ PC FS A
Sbjct: 64 KSLPKNVDVVVGSPPCTQFSYA 85
>gi|194098495|ref|YP_002001557.1| DNA modification methylase [Neisseria gonorrhoeae NCCP11945]
gi|239998889|ref|ZP_04718813.1| DNA modification methylase [Neisseria gonorrhoeae 35/02]
gi|240115566|ref|ZP_04729628.1| DNA modification methylase [Neisseria gonorrhoeae PID18]
gi|240125661|ref|ZP_04738547.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679]
gi|254493672|ref|ZP_05106843.1| DNA modification methylase [Neisseria gonorrhoeae 1291]
gi|260440624|ref|ZP_05794440.1| DNA modification methylase [Neisseria gonorrhoeae DGI2]
gi|268594728|ref|ZP_06128895.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae 35/02]
gi|268601236|ref|ZP_06135403.1| DNA modification methylase [Neisseria gonorrhoeae PID18]
gi|268684247|ref|ZP_06151109.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679]
gi|291043935|ref|ZP_06569651.1| DNA modification methylase [Neisseria gonorrhoeae DGI2]
gi|193933785|gb|ACF29609.1| DNA modification methylase [Neisseria gonorrhoeae NCCP11945]
gi|226512712|gb|EEH62057.1| DNA modification methylase [Neisseria gonorrhoeae 1291]
gi|268548117|gb|EEZ43535.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae 35/02]
gi|268585367|gb|EEZ50043.1| DNA modification methylase [Neisseria gonorrhoeae PID18]
gi|268624531|gb|EEZ56931.1| DNA modification methylase [Neisseria gonorrhoeae SK-92-679]
gi|291012398|gb|EFE04387.1| DNA modification methylase [Neisseria gonorrhoeae DGI2]
gi|317164179|gb|ADV07720.1| DNA modification methylase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 312
Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
++ G GG L LE+ EI P + +T + +I GD+ +
Sbjct: 3 FTSLEICAGAGGQALGLERA----GFSHVALIEIEPSACQTLRLNRPDWNVIEGDVRLFQ 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ D+L G PC PFS+AG
Sbjct: 59 GEGYDGIDLLAGGVPCPPFSKAG 81
>gi|59801274|ref|YP_207986.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA 1090]
gi|240014199|ref|ZP_04721112.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae DGI18]
gi|240016634|ref|ZP_04723174.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA6140]
gi|240080823|ref|ZP_04725366.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA19]
gi|240112810|ref|ZP_04727300.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae MS11]
gi|240117858|ref|ZP_04731920.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae PID1]
gi|240121762|ref|ZP_04734724.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae PID24-1]
gi|240123416|ref|ZP_04736372.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae PID332]
gi|240128118|ref|ZP_04740779.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae
SK-93-1035]
gi|268596944|ref|ZP_06131111.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA19]
gi|268598881|ref|ZP_06133048.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae MS11]
gi|268603557|ref|ZP_06137724.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae PID1]
gi|268682037|ref|ZP_06148899.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae PID332]
gi|268686505|ref|ZP_06153367.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae SK-93-1035]
gi|293399137|ref|ZP_06643302.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|5051442|emb|CAB44950.1| DNA modification methylase [Neisseria gonorrhoeae]
gi|5262959|emb|CAB45015.2| DNA modification methylase [Neisseria gonorrhoeae]
gi|59718169|gb|AAW89574.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA 1090]
gi|268550732|gb|EEZ45751.1| DNA modification methylase M.NGOI [Neisseria gonorrhoeae FA19]
gi|268583012|gb|EEZ47688.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae MS11]
gi|268587688|gb|EEZ52364.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae PID1]
gi|268622321|gb|EEZ54721.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae PID332]
gi|268626789|gb|EEZ59189.1| DNA-cytosine methyltransferase [Neisseria gonorrhoeae SK-93-1035]
gi|291610551|gb|EFF39661.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
Length = 312
Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
++ G GG L LE+ EI P + +T + +I GD+ +
Sbjct: 3 FTSLEICAGAGGQALGLERA----GFSHVALIEIEPSACQTLRLNRPDWNVIEGDVRLFQ 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ D+L G PC PFS+AG
Sbjct: 59 GEGYDGIDLLAGGVPCPPFSKAG 81
>gi|323356693|ref|YP_004223089.1| site-specific DNA methylase [Microbacterium testaceum StLB037]
gi|323273064|dbj|BAJ73209.1| site-specific DNA methylase [Microbacterium testaceum StLB037]
Length = 360
Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
DLFCG GG+ L L+Q ++ +++P Y+ N I D+ +K D+
Sbjct: 11 IDLFCGAGGLSLGLKQA----GIDVVAGIDLDPACQYPYEQNLKAQFILKDVGDVKGVDL 66
Query: 65 PDHD------VLLAGFPCQPFS 80
+L PCQPFS
Sbjct: 67 QALWPEGKLRLLAGCAPCQPFS 88
>gi|254804928|ref|YP_003083149.1| putative type II DNA modification methylase [Neisseria
meningitidis alpha14]
gi|254668470|emb|CBA05754.1| putative type II DNA modification methylase [Neisseria
meningitidis alpha14]
Length = 312
Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
++ G GG L LE+ EI P + +T + +I GD+ +
Sbjct: 3 FTSLEICAGAGGQALGLERA----GFSHVALIEIEPSACQTLRLNRPDWNVIEGDVRLFQ 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ D+L G PC PFS+AG
Sbjct: 59 GKGYDGIDLLAGGVPCPPFSKAG 81
>gi|242024278|ref|XP_002432555.1| Modification methylase HaeIII, putative [Pediculus humanus
corporis]
gi|212518015|gb|EEB19817.1| Modification methylase HaeIII, putative [Pediculus humanus
corporis]
Length = 267
Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIK 60
+ + +L+ GIGG+ L+++ + + +IN + + Y+ NFP T L+ +I ++
Sbjct: 1 MNVIELYSGIGGMHFALKESGID--YKVVKAVDINTTANEVYKLNFPKTLLLGKNIQSLQ 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+D D++L PCQP ++ G
Sbjct: 59 LEDFNGIDMILMSPPCQPHTRNG 81
>gi|145635992|ref|ZP_01791674.1| modification methylase HgiDII [Haemophilus influenzae PittAA]
gi|145266758|gb|EDK06780.1| modification methylase HgiDII [Haemophilus influenzae PittAA]
Length = 343
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M++ DLFCG GG+ L+Q ++ +I ++ N + D++ +
Sbjct: 1 MIEAIDLFCGAGGLTAGLQQA----GIKVKAGYDIEEQCRYAFEFNNHAEFVNKDVSLVD 56
Query: 61 TQDI------PDHDVLLAGFPCQPFSQ 81
++I +L PCQPFS+
Sbjct: 57 NEEIARRFSKKAIRLLAGCAPCQPFSK 83
>gi|46019864|emb|CAE52388.1| putative cytosine-specific methyltransferase [Streptococcus
thermophilus]
gi|312279225|gb|ADQ63882.1| Cytosine-specific methyltransferase [Streptococcus thermophilus
ND03]
Length = 515
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 28/107 (26%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----------- 49
M DLFCG GG + Q + FSS+ +P + +TY
Sbjct: 1 MPYAIDLFCGAGGFSEGILQA----GFDILFSSDRSPMAQETYVNRHRQLGLEEGVDTHF 56
Query: 50 -------------TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++ + D DV+ G PCQ FS+ G
Sbjct: 57 ELADIKDLTSERIFEVINNLRYGNIFEPGDIDVIFGGPPCQGFSRLG 103
>gi|547931|sp|P36216|MTC1_PBCVI RecName: Full=Modification methylase CviJI; Short=M.CviJI;
AltName: Full=Cytosine-specific methyltransferase CviJI
gi|323315|gb|AAA88826.1| cytosine methyltransferase [Paramecium bursaria Chlorella virus
IL3A]
gi|483782|gb|AAC55063.1| cytosine methyltransferase [Chlorella virus]
Length = 367
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ +LF GI GI L EIN + K + F + +F D+ K
Sbjct: 3 FRTLELFAGIAGISHGLRGIS-----TPVAFVEINEDAQKFLKTKFSDASVFNDVTKFTK 57
Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83
D P+ D++ AGFPC FS AG
Sbjct: 58 SDFPEDIDMITAGFPCTGFSIAG 80
>gi|119509253|ref|ZP_01628403.1| DNA-cytosine methyltransferase family protein [Nodularia spumigena
CCY9414]
gi|119466095|gb|EAW46982.1| DNA-cytosine methyltransferase family protein [Nodularia spumigena
CCY9414]
Length = 418
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 33/95 (34%), Gaps = 20/95 (21%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-------- 55
I F G GG+ + E + S EIN +T + N PN + G
Sbjct: 70 IVSFFSGAGGLDIGFEYA----GFKHLASIEINSIFCQTIRLNRPNWFVVGPPDYSGDVK 125
Query: 56 --------IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ + P + G PCQPFS A
Sbjct: 126 NRDEIFTILKVMLGIPTPFEGIFTGGPPCQPFSIA 160
>gi|328543334|ref|YP_004303443.1| DNA methylase, C-5 cytosine-specific family [polymorphum gilvum
SL003B-26A1]
gi|326415695|gb|ADZ72758.1| DNA methylase, C-5 cytosine-specific family [Polymorphum gilvum
SL003B-26A1]
Length = 418
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 13/87 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF--------- 53
+ DLF G GG+ + ++++P + +T++ NFP F
Sbjct: 23 RCVDLFAGAGGLAVGFRSA----GWGIVAGNDVDPDAAQTFRLNFPEASFFEGPVSKLAA 78
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFS 80
++ + D D L+ G PCQ FS
Sbjct: 79 DELLADCGIERGDLDCLVGGPPCQSFS 105
>gi|220926789|ref|YP_002502091.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS
2060]
gi|219951396|gb|ACL61788.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS
2060]
Length = 358
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 12/89 (13%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI---- 56
ML DLFCG GG+ L ++ S + +P +Y N P + +
Sbjct: 1 ML--IDLFCGCGGLSLGARSA----GLKVTLSVDNDPILTSSYTFNHPQSRLILADVADL 54
Query: 57 --AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ D ++ G PCQ FS+ G
Sbjct: 55 SGRYLRRAAGGYIDGIVGGPPCQGFSEIG 83
>gi|254293303|ref|YP_003059326.1| DNA-cytosine methyltransferase [Hirschia baltica ATCC 49814]
gi|254041834|gb|ACT58629.1| DNA-cytosine methyltransferase [Hirschia baltica ATCC 49814]
Length = 383
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIKT 61
++ + F G G LE + C F+++ +P S P D+ +
Sbjct: 14 RVLEFFAGGGFAIKGLEDS-----FHCVFANDNDPLKSRTYTANFGPTHFDTSDVWTLDA 68
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP+ ++ A FPCQ S AG
Sbjct: 69 NHIPNAELAWASFPCQDISIAG 90
>gi|154508844|ref|ZP_02044486.1| hypothetical protein ACTODO_01354 [Actinomyces odontolyticus ATCC
17982]
gi|153798478|gb|EDN80898.1| hypothetical protein ACTODO_01354 [Actinomyces odontolyticus ATCC
17982]
Length = 355
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 20/98 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ L+ G GG+ L + FS++IN +V TY+ A +
Sbjct: 1 MRLISLYSGAGGLDLGFAKA----GFIPVFSADINRDAVDTYRTISKAVQGEWKNAAVLF 56
Query: 62 QDI----------------PDHDVLLAGFPCQPFSQAG 83
++ D ++++ G PCQ FS G
Sbjct: 57 ENCDVRCGDVLAESNDLSAGDAEIVIGGPPCQGFSVGG 94
>gi|260429702|ref|ZP_05783678.1| site-specific DNA methylase [Citreicella sp. SE45]
gi|260419185|gb|EEX12439.1| site-specific DNA methylase [Citreicella sp. SE45]
Length = 330
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 27/85 (31%), Gaps = 8/85 (9%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS------VKTYQANFPNTLIFGDIAK 58
L G GG+ L L E + Y+ A +
Sbjct: 23 LSLCSGAGGLDLGLHLAL--PGYRTVGHVERDAYAAAILVARMEDAALDRAPVWDDVGTF 80
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
D++ AG+PCQPFS AG
Sbjct: 81 DGRAWRGAVDIVTAGYPCQPFSVAG 105
>gi|86159861|ref|YP_466646.1| DNA-cytosine methyltransferase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85776372|gb|ABC83209.1| DNA-cytosine methyltransferase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 380
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML + LF GIGG+ L + ++ +H E + + A FP GDI +
Sbjct: 1 MLSVAGLFAGIGGLELGMARSGHH----TKLLCENDACARAVLDARFPEVPKHGDIRTL- 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ D ++ AGFPCQ SQAG
Sbjct: 56 ERLPKDTSLVTAGFPCQDLSQAG 78
>gi|296242618|ref|YP_003650105.1| DNA-cytosine methyltransferase [Thermosphaera aggregans DSM
11486]
gi|296095202|gb|ADG91153.1| DNA-cytosine methyltransferase [Thermosphaera aggregans DSM
11486]
Length = 461
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 17/92 (18%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62
+ LF G GG+ L + E +++I + VKTY NF +I ++ Q
Sbjct: 1 MLSLFSGAGGLDLGFVMSGR---FEILAANDIEEHMVKTYSINFGARIIPRLQPRLYPQV 57
Query: 63 -------------DIPDHDVLLAGFPCQPFSQ 81
+V++ G PCQ FS
Sbjct: 58 ILGDVSKVDFSLLKDEGINVVVGGPPCQDFSI 89
>gi|291564095|emb|CBL42911.1| Site-specific DNA methylase [butyrate-producing bacterium SS3/4]
Length = 361
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GIG L + + ++SEI + + +FP+ + GDI K+
Sbjct: 4 IKLGSLFDGIGVFPL----AASRCGIRPVWASEIEKAPISITKRHFPDMVHLGDITKVDG 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP ++ G PCQ S G
Sbjct: 60 GKIPPVHIITFGSPCQNLSLIG 81
>gi|188575624|ref|YP_001912553.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188520076|gb|ACD58021.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 395
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 13/84 (15%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINP---------YSVKTYQANFPNTLIFGDIA 57
+F G GG+ L + +++EI+P + + + I
Sbjct: 1 MFAGAGGLSEGLREA----GFTSLYANEISPRYAQTYAANHPATQVDSRDIRKVDARKIR 56
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ + D++ G PCQ FS
Sbjct: 57 NLLGLKRGELDLIAGGPPCQGFSI 80
>gi|238923216|ref|YP_002936731.1| DNA-cytosine methyltransferase [Eubacterium rectale ATCC 33656]
gi|238925032|ref|YP_002938548.1| DNA-cytosine methyltransferase [Eubacterium rectale ATCC 33656]
gi|238874890|gb|ACR74597.1| DNA-cytosine methyltransferase [Eubacterium rectale ATCC 33656]
gi|238876707|gb|ACR76414.1| DNA-cytosine methyltransferase [Eubacterium rectale ATCC 33656]
Length = 361
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GIG L + + ++SEI + + +FP+ + GDI K+
Sbjct: 4 IKLGSLFDGIGVFPL----AASRCGIRPVWASEIEKAPISITKRHFPDMVHLGDITKVDG 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP ++ G PCQ S G
Sbjct: 60 GKIPPVHIITFGSPCQNLSLIG 81
>gi|47207937|emb|CAF91437.1| unnamed protein product [Tetraodon nigroviridis]
Length = 405
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
+++ +L+ GIGG+ L+++ + + +IN + Y+ NFP+T + I I
Sbjct: 1 MRVLELYSGIGGMHYALKES--EVCHQVVAAVDINTTANDVYRHNFPSTALLNKTIEGIT 58
Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83
++ DV+L PCQPF++ G
Sbjct: 59 LEEFNQLSFDVILMSPPCQPFTRIG 83
>gi|42779446|ref|NP_976693.1| DNA-cytosine methyltransferase family protein [Bacillus cereus
ATCC 10987]
gi|42735362|gb|AAS39301.1| DNA-cytosine methyltransferase family protein [Bacillus cereus
ATCC 10987]
Length = 350
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECF--FSSEINPYSVKTY----QANFPNTLIF 53
+ ++ +LFCG GGI N ++++ + + +TY + PNT+
Sbjct: 2 IFRLGELFCGPGGIAWGAMNASIEDPNFAIVHQWANDYDADTCETYRLNICPDTPNTVYH 61
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI K + D L GFPC +S G
Sbjct: 62 ADIRKFDMSKLAPIDALAFGFPCNDYSVVG 91
>gi|325962428|ref|YP_004240334.1| DNA-methyltransferase Dcm [Arthrobacter phenanthrenivorans Sphe3]
gi|323468515|gb|ADX72200.1| DNA-methyltransferase Dcm [Arthrobacter phenanthrenivorans Sphe3]
Length = 454
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 37/111 (33%), Gaps = 33/111 (29%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K DLF G GG+ L +E+ + + E + + +T+ N +
Sbjct: 1 MKYVDLFSGCGGLSLGIERA----GGQLVLAVEKSDMAARTFHHNLLGDASDIRQWERYV 56
Query: 62 QDIPDH-----------------------------DVLLAGFPCQPFSQAG 83
D+ D+++ G PCQ FS AG
Sbjct: 57 ASSEDNQIASRLLVRELSVLLANTVAMEDLRANGLDLVVGGPPCQGFSLAG 107
>gi|225377327|ref|ZP_03754548.1| hypothetical protein ROSEINA2194_02974 [Roseburia inulinivorans
DSM 16841]
gi|225210858|gb|EEG93212.1| hypothetical protein ROSEINA2194_02974 [Roseburia inulinivorans
DSM 16841]
Length = 361
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GIG L + + ++SEI + + +FP+ GDI K+
Sbjct: 4 IKLGSLFDGIGVFPL----AASRCGIRPVWASEIEKAPISITKRHFPDMAHLGDITKVDG 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP V+ G PCQ S G
Sbjct: 60 GKIPPVHVITFGSPCQNLSLIG 81
>gi|213964765|ref|ZP_03392965.1| modification methylase NaeI [Corynebacterium amycolatum SK46]
gi|213952958|gb|EEB64340.1| modification methylase NaeI [Corynebacterium amycolatum SK46]
Length = 333
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN---------FPNTLI 52
++ G GG L LEQ + E + + T + N +
Sbjct: 4 FTSLEICAGAGGQALGLEQA----GFYHVCTVENDRDACNTLRLNRDNDLVAAKQRWNVR 59
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ + D D++ G PC PFS AG
Sbjct: 60 EDDVLNLNGADFKGVDLVAGGVPCPPFSIAG 90
>gi|182437151|ref|YP_001824870.1| putative SacI methylase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178465667|dbj|BAG20187.1| putative SacI methylase [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 363
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 16/91 (17%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
LF G GG+ L +E E + E N +V T + NF + I
Sbjct: 18 ISLFSGAGGLDLGVEAA----GYEVRAAVEHNADAVATMEKNFSHLQSEVIQRDILEVPT 73
Query: 65 P------------DHDVLLAGFPCQPFSQAG 83
D+L+ G PC PFS++G
Sbjct: 74 KELLGAAGLKGRERPDLLVGGPPCTPFSKSG 104
>gi|148827577|ref|YP_001292330.1| hypothetical protein CGSHiGG_05020 [Haemophilus influenzae
PittGG]
gi|319775697|ref|YP_004138185.1| Cytosine-specific methyltransferase (pseudogene) [Haemophilus
influenzae F3047]
gi|319896763|ref|YP_004134957.1| cytosine-specific methyltransferase [Haemophilus influenzae
F3031]
gi|148718819|gb|ABQ99946.1| hypothetical protein CGSHiGG_05020 [Haemophilus influenzae
PittGG]
gi|317432266|emb|CBY80618.1| Cytosine-specific methyltransferase [Haemophilus influenzae
F3031]
gi|317450288|emb|CBY86504.1| Cytosine-specific methyltransferase (pseudogene) [Haemophilus
influenzae F3047]
Length = 424
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--- 57
M + GI + + + + SEI P+ ++PN GD+
Sbjct: 1 MFTYGSICSGI----EAVSVAWKGLG-KPLWFSEIEPFPCAVLTYHYPNIPNLGDMTTLP 55
Query: 58 -KIKTQDIPDHDVLLAGFPCQPFSQAG 83
KI ++IP DVL+ G PCQ FS AG
Sbjct: 56 EKILNREIPAPDVLVGGTPCQAFSIAG 82
>gi|83718377|ref|YP_439560.1| DNA methyltransferase [Burkholderia thailandensis E264]
gi|83652202|gb|ABC36266.1| DNA methyltransferase [Burkholderia thailandensis E264]
Length = 535
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + GI ++ + SEI + + ++P GD+ + K
Sbjct: 61 MIYGSVCSGI----EAATVAWHPLGWRPAWFSEIERFPCAVLRHHYPTVPNLGDMKRFKE 116
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+L+ G PCQ FS AG
Sbjct: 117 WPDAAIDLLVGGTPCQSFSVAG 138
>gi|227540659|ref|ZP_03970708.1| possible DNA (cytosine-5-)-methyltransferase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227239483|gb|EEI89498.1| possible DNA (cytosine-5-)-methyltransferase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 386
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 25/101 (24%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-------- 55
+ + G G + + E+ E +++E + K + A +
Sbjct: 11 VLSFYSGGGFMDMGFEKA----GFEIVWTNEFDKVFAKLHAAGITSWRKSRGNGIKAEIF 66
Query: 56 -------------IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + P+H ++ G PCQ FS G
Sbjct: 67 NTKSITDVKSNEIIKEAFPNGKPEHFGIIGGPPCQDFSMNG 107
>gi|313886989|ref|ZP_07820689.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas
asaccharolytica PR426713P-I]
gi|312923515|gb|EFR34324.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas
asaccharolytica PR426713P-I]
Length = 349
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62
+ DLFCGIGG+ L+ +E +++ Y+ N I+ DI +
Sbjct: 5 VVDLFCGIGGLSYGLKTA----GLEVLAGYDLDQTCAFAYEKNNNAQFIYKDIRSVCGGE 60
Query: 63 -----DIPDHDVLLAGFPCQPFS 80
D D VL PCQPFS
Sbjct: 61 VSSLLDGVDIKVLAGCAPCQPFS 83
>gi|168185144|ref|ZP_02619808.1| modification methylase SinI [Clostridium botulinum Bf]
gi|182671812|gb|EDT83773.1| modification methylase SinI [Clostridium botulinum Bf]
Length = 363
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 14/93 (15%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M F G GG+ + + EI +T + N+P+ I
Sbjct: 1 MKNAISFFTGAGGLDIGVHDA----GFNVRLCVEIEKRYCETIKLNYPDWNIKNGDIMEY 56
Query: 61 TQDIPDHD----------VLLAGFPCQPFSQAG 83
++ + ++ G PCQ FS AG
Sbjct: 57 DKERIYKEGLLNSNEEISLIFGGSPCQSFSTAG 89
>gi|330985029|gb|EGH83132.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 422
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS--VKTYQANFPNTLIFGDIAKIK 60
+ + F G GG+ + +C F+++ +P L+ DI K+
Sbjct: 33 RFYEFFAG-GGMA----RAGLGDGWDCLFANDFDPMKGRAYRDNWGGGLDLMVEDINKLT 87
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
T+ +PD D++ A FPCQ S AG
Sbjct: 88 TEQLPDQADLVWASFPCQDLSLAG 111
>gi|146305026|ref|YP_001192342.1| DNA-cytosine methyltransferase [Metallosphaera sedula DSM 5348]
gi|145703276|gb|ABP96418.1| DNA-cytosine methyltransferase [Metallosphaera sedula DSM 5348]
Length = 313
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKT 61
K+ DLF G GG + + EIN + +TY ANFP T++ DI +I
Sbjct: 5 KVVDLFSGAGGFGRGF----KEVGFQIGVAVEINHAAARTYSANFPTTIVLEEDIREITG 60
Query: 62 QDI-----PDHDVLLAGFPCQPFSQA 82
++I + DV++ PC+PF+ A
Sbjct: 61 REIVREIGKEPDVVIGSPPCEPFTAA 86
>gi|23100791|ref|NP_694258.1| cytosine-specific methyltransferase [Oceanobacillus iheyensis
HTE831]
gi|50897489|sp|Q8EL95|MT36_OCEIH RecName: Full=Putative modification methylase OB3336; AltName:
Full=Cytosine-specific methyltransferase; AltName:
Full=M.OihORF3336P
gi|22779025|dbj|BAC15292.1| cytosine-specific methyltransferase [Oceanobacillus iheyensis
HTE831]
Length = 460
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 16/92 (17%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK------TYQANFPNTLIFGDIA 57
+ DLF G GG+ L + E++ + ++ + + DI
Sbjct: 17 VVDLFSGCGGLALGFQLA----GFNIRKGIELDRDASDVASFNLHWRQGKHDRHLNNDIT 72
Query: 58 ------KIKTQDIPDHDVLLAGFPCQPFSQAG 83
D + +++ G PCQ +S+ G
Sbjct: 73 LLSANEFYNDLDRKNDLIVIGGPPCQAYSKIG 104
>gi|256390614|ref|YP_003112178.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928]
gi|256356840|gb|ACU70337.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928]
Length = 419
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 31/90 (34%), Gaps = 13/90 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+LF G GG+ L + + + +E P + +T + N I
Sbjct: 21 TSVELFSGGGGLALAMHRA----GFQHLMCNEFAPRACETLRMNSEALGRPQLIEGDIAT 76
Query: 63 D---------IPDHDVLLAGFPCQPFSQAG 83
DV+ G PCQPFS G
Sbjct: 77 AVTDERLAELTGKVDVVAGGPPCQPFSLGG 106
>gi|160893193|ref|ZP_02073981.1| hypothetical protein CLOL250_00739 [Clostridium sp. L2-50]
gi|160945817|ref|ZP_02093043.1| hypothetical protein FAEPRAM212_03350 [Faecalibacterium
prausnitzii M21/2]
gi|156865276|gb|EDO58707.1| hypothetical protein CLOL250_00739 [Clostridium sp. L2-50]
gi|158443548|gb|EDP20553.1| hypothetical protein FAEPRAM212_03350 [Faecalibacterium
prausnitzii M21/2]
Length = 361
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GIG L + + ++SEI + + +FP+ + GDI K+
Sbjct: 4 IKLGSLFDGIGVFPL----AASRCGIRPVWASEIEKAPISITKRHFPDMVHLGDITKVDG 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP ++ G PCQ S G
Sbjct: 60 GKIPPVHIITFGSPCQNLSLIG 81
>gi|46580156|ref|YP_010964.1| C-5 cytosine-specific DNA methylase family protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|46449573|gb|AAS96223.1| C-5 cytosine-specific DNA methylase family protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|311233853|gb|ADP86707.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
Length = 369
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 34/93 (36%), Gaps = 18/93 (19%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------ 56
K DLFCG GG L + +E + E N Y+ TY+ NF +
Sbjct: 12 KAVDLFCGAGGFSL----AARNLGIEVVAALENNHYAAATYRHNFIEGSRRPPLLFEGDI 67
Query: 57 --------AKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ D+++ G PCQ FS
Sbjct: 68 LAISPEAFMQAANLTPGGVDIIMGGPPCQGFST 100
>gi|284161497|ref|YP_003400120.1| DNA-cytosine methyltransferase [Archaeoglobus profundus DSM 5631]
gi|284011494|gb|ADB57447.1| DNA-cytosine methyltransferase [Archaeoglobus profundus DSM 5631]
Length = 310
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 9/84 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIK 60
+ + D+F G GG E + E P + +I D+ +++
Sbjct: 1 MNVVDVFAGCGGFSRGF----KEEGFELVAAIENFKPVAETYKTNFPEVEVIVKDVKEVR 56
Query: 61 TQD----IPDHDVLLAGFPCQPFS 80
D D DVL+ PC+PF+
Sbjct: 57 GFDVERICGDVDVLIGSPPCEPFT 80
>gi|332710686|ref|ZP_08430629.1| DNA-methyltransferase [Lyngbya majuscula 3L]
gi|332350562|gb|EGJ30159.1| DNA-methyltransferase [Lyngbya majuscula 3L]
Length = 450
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 33/108 (30%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP--------------------------- 37
DLF G GG L +EQ + + E +P
Sbjct: 11 VDLFAGAGGFSLGIEQA----GFDVALAVEQDPIHGAVYAFNSPQTKVLCTDIATLSGQE 66
Query: 38 --YSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+++ + +++ + D+++ G PCQ FS G
Sbjct: 67 IQKALREWGTEREQNQHCTEVSSQVSTIDLVIDLVIGGPPCQGFSLIG 114
>gi|11138959|gb|AAG31558.1| SgrAIM methylase [Streptomyces griseus]
Length = 429
Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 20/97 (20%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL----------- 51
K LF G GG + + E++ ++ TY+ NFP
Sbjct: 25 KAVSLFSGCGGFCEGVRLA----GFSVEAAVELDRFAAVTYRHNFPEVPLFEGDVHDFLN 80
Query: 52 -----IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
G+ + + D+L G PCQ +SQ G
Sbjct: 81 DSSETWRGEAERFSDVKAGNIDLLFGGPPCQGYSQIG 117
>gi|284050355|ref|ZP_06380565.1| site-specific DNA-methyltransferase [Arthrospira platensis str.
Paraca]
Length = 371
Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 28/85 (32%), Gaps = 11/85 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKI 59
+ D F G GG L + H + EI+ ++ + I
Sbjct: 1 MLDTFAGAGGFSLGFQWAGAH----IIGAIEIDEWAGETFQFNHPNAHLIKGDIKGITDE 56
Query: 60 KTQDIP---DHDVLLAGFPCQPFSQ 81
+ D ++L G PCQ FS
Sbjct: 57 QILDTFGEIKPHIILGGIPCQGFSI 81
>gi|87310990|ref|ZP_01093115.1| DNA-cytosine methyltransferase [Blastopirellula marina DSM 3645]
gi|87286280|gb|EAQ78189.1| DNA-cytosine methyltransferase [Blastopirellula marina DSM 3645]
Length = 385
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN--PYSVKTYQANFPNTLIFGDIAKIK 60
+ F GIG +RL LE+ E F+++I+ + GD+ ++
Sbjct: 8 TFAEFFAGIGLVRLGLERA----GWEVRFANDIDAAKHRQYEAHFGADEAFALGDVHQLD 63
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
IPD + A FPC S AG
Sbjct: 64 AAAIPDVTLATASFPCTDLSLAG 86
>gi|323484993|ref|ZP_08090347.1| hypothetical protein HMPREF9474_02098 [Clostridium symbiosum
WAL-14163]
gi|323401735|gb|EGA94079.1| hypothetical protein HMPREF9474_02098 [Clostridium symbiosum
WAL-14163]
Length = 361
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GIG L + + ++SEI + + +FP+ + GDI K+
Sbjct: 4 IKLGSLFDGIGVFPL----AASRCGIRPVWASEIEKAPISITKRHFPDMVHLGDITKVDG 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP ++ G PCQ S G
Sbjct: 60 GKIPPVHIITFGSPCQNLSLIG 81
>gi|313676237|ref|YP_004054233.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
gi|312942935|gb|ADR22125.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
Length = 448
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 36/122 (29%), Gaps = 40/122 (32%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN---------------------------VECFFSSE 34
L + LF G GG+ L E F + FS++
Sbjct: 35 LNVVSLFSGCGGMDLGFEGGFKVKKESVNEILNKDFIESFCANGYIKLKKTRFRTTFSND 94
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIK-------------TQDIPDHDVLLAGFPCQPFSQ 81
I + + F + ++ + DV+ GFPCQ FS
Sbjct: 95 ILTEARNAWVHYFKKSQPNPEVFHTDSIVDLVKLHKSGVNVFPENVDVVTGGFPCQDFSV 154
Query: 82 AG 83
+G
Sbjct: 155 SG 156
>gi|157164246|ref|YP_001466260.1| modification methylase HaeIII (cytosine-specificmethyltransferase
HaeIII; M.HaeIII) [Campylobacter concisus 13826]
gi|112801543|gb|EAT98887.1| modification methylase HaeIII (Cytosine-specificmethyltransferase
HaeIII) (M.HaeIII) [Campylobacter concisus 13826]
Length = 388
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 34/98 (34%), Gaps = 21/98 (21%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKT 61
DLF G GG+ E++ Y+ T Q + +I KIK
Sbjct: 5 TFIDLFAGAGGMAEGF----YQEGYMALTHIELDKYACLTLQERMRHYGYHENEINKIKP 60
Query: 62 QDIPDH----------------DVLLAGFPCQPFSQAG 83
DI D DV++ G PCQ FS G
Sbjct: 61 TDITDKNIISIIESNIGKTSDIDVIIGGPPCQSFSSHG 98
>gi|325288246|ref|YP_004264427.1| C-5 cytosine-specific DNA methylase [Syntrophobotulus glycolicus
DSM 8271]
gi|324963647|gb|ADY54426.1| C-5 cytosine-specific DNA methylase [Syntrophobotulus glycolicus
DSM 8271]
Length = 90
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+ + LF GIGG L H + ++SEI + ++ + FP L GDI K+
Sbjct: 1 MMTMGSLFDGIGGFPLVA----VHNGITPLWASEIEAFPIEVTKIRFPEMLHVGDITKLD 56
Query: 61 TQDIPDHDVLLAGFPCQPF 79
+P DV+ G PCQ +
Sbjct: 57 GAALPLVDVICGGSPCQDY 75
>gi|110799020|ref|YP_694603.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC
13124]
gi|110673667|gb|ABG82654.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC
13124]
Length = 361
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 15/94 (15%)
Query: 1 MLKI-TDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAK 58
M KI F G GG+ + + + + S E+ Y V Q N ++ GDI
Sbjct: 1 MSKIAISFFAGAGGLDIGIHEA----GFDVKLSVELEEKYCVTLKQNNPTFNVVNGDIMD 56
Query: 59 IKTQDIPDH---------DVLLAGFPCQPFSQAG 83
+ I D++ G PCQ FS AG
Sbjct: 57 YSKEKIYSDAGLNYNDEIDLIFGGSPCQSFSTAG 90
>gi|238018550|ref|ZP_04598976.1| hypothetical protein VEIDISOL_00377 [Veillonella dispar ATCC 17748]
gi|237865021|gb|EEP66311.1| hypothetical protein VEIDISOL_00377 [Veillonella dispar ATCC 17748]
Length = 452
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 12/93 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-----------SVKTYQANFPN 49
++KI +F G+GG + LE + + +S++ P + P
Sbjct: 22 VMKIFSMFDGVGGFIVGLENSSKEV-FQTLYSNQYEPSRKTQDAYEVGLYRFPDMEHIPT 80
Query: 50 TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ K D+++ GFPCQ +S A
Sbjct: 81 DVALIPNEKFGEMKSNGVDMIVGGFPCQDYSVA 113
>gi|155122046|gb|ABT13914.1| hypothetical protein MT325_m360R [Paramecium bursaria chlorella
virus MT325]
Length = 342
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML DLF GIGGI L VE E N + PN +F D+
Sbjct: 1 MLHAIDLFSGIGGITHGLRGI-----VEPIAYVEKNDDARGFLARKHPNVPVFDDVCTFD 55
Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83
D++ G+PC FS AG
Sbjct: 56 ATPYLGKVDIITGGWPCTGFSTAG 79
>gi|315506801|ref|YP_004085688.1| DNA-cytosine methyltransferase [Micromonospora sp. L5]
gi|315413420|gb|ADU11537.1| DNA-cytosine methyltransferase [Micromonospora sp. L5]
Length = 412
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----A 57
++ ++ G GG L LE+ E + E++ + KT + N P+ I
Sbjct: 4 FEVIEICAGAGGQALGLEKA----GFEHALAVELDSNACKTLEENRPSWKIAQGDVADEE 59
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D +L G PC PFS AG
Sbjct: 60 VWRPADHQGVSLLAGGVPCPPFSIAG 85
>gi|254460591|ref|ZP_05074007.1| C-5 cytosine-specific DNA methylase [Rhodobacterales bacterium
HTCC2083]
gi|206677180|gb|EDZ41667.1| C-5 cytosine-specific DNA methylase [Rhodobacteraceae bacterium
HTCC2083]
Length = 384
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--IFGDIAKIK 60
K + F G G + +C +++I+P +TY+ N+ +
Sbjct: 10 KFAEFFSGGG-----MVHAALGAQWDCVLANDIDPMKCETYRQNWGGAHLLEGDVAELPE 64
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D++ A PCQ FS AG
Sbjct: 65 GTLHQPLDLIWASSPCQDFSLAG 87
>gi|187923153|ref|YP_001894795.1| DNA-cytosine methyltransferase [Burkholderia phytofirmans PsJN]
gi|187714347|gb|ACD15571.1| DNA-cytosine methyltransferase [Burkholderia phytofirmans PsJN]
Length = 317
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M LF G GG L +++I PY+ Y N P T +
Sbjct: 1 MPTAVSLFTGCGGSDAGL----VSLGFNVLMANDILPYARDVYLHNHPETDYRLG-SVAD 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ P ++L+ +PCQ FSQ G
Sbjct: 56 IKSFPKAELLVGCYPCQGFSQGG 78
>gi|31074161|gb|AAP20551.1| DNA cytosine-5 methyltransferase 1 [Bos taurus]
Length = 1611
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIK 60
L+ D+F G GG+ Q E ++ E +P + N +T+ D +
Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRFNNPGSTVFTKDCNVLV 1192
Query: 61 T---------------QDIPDHDVLLAGFPCQPFS 80
D ++L G PCQ FS
Sbjct: 1193 KLVMAGEVTNSRGQKLLQKGDVEMLCGGPPCQGFS 1227
>gi|308062920|gb|ADO04807.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Sat464]
Length = 355
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
KI DLFCG GG LE + + + + + + I GDI +I+
Sbjct: 3 YKILDLFCGAGGFSAGLECLKE---FDALIGLDCDKQALITFENNHKNAIGICGDITQIE 59
Query: 61 TQDIP-------DHDVLLAGFPCQPFSQAG 83
++ + ++++ G PCQ FS G
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSNKG 89
>gi|315917403|ref|ZP_07913643.1| type II restriction-modification system methylation subunit
[Fusobacterium gonidiaformans ATCC 25563]
gi|313691278|gb|EFS28113.1| type II restriction-modification system methylation subunit
[Fusobacterium gonidiaformans ATCC 25563]
Length = 320
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI +LF GIG IR + + EI+ VK+Y A + I
Sbjct: 7 IKIIELFGGIGAIRKAFIR--QKIPHQVIDYVEIDKNCVKSYNALYNTDFKPKSILDFHP 64
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D D+L+ G PCQ FS++G
Sbjct: 65 PD-ERIDLLMHGSPCQDFSRSG 85
>gi|257466246|ref|ZP_05630557.1| Type II restriction-modification system methylation subunit
[Fusobacterium gonidiaformans ATCC 25563]
Length = 327
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI +LF GIG IR + + EI+ VK+Y A + I
Sbjct: 14 IKIIELFGGIGAIRKAFIR--QKIPHQVIDYVEIDKNCVKSYNALYNTDFKPKSILDFHP 71
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D D+L+ G PCQ FS++G
Sbjct: 72 PD-ERIDLLMHGSPCQDFSRSG 92
>gi|325955715|ref|YP_004293189.1| modification methylase BsuRI [Lactobacillus acidophilus 30SC]
gi|325334695|gb|ADZ08248.1| modification methylase BsuRI [Lactobacillus acidophilus 30SC]
Length = 406
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 22/104 (21%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV----------------------ECFFSSEINPYS 39
+ + LF G GG+ L +E +S+++ +
Sbjct: 58 INVLSLFSGAGGLDLGVEIAAASAKHGVDKTYTAFQNRRELSKLLDSTNVIYSNDLFASA 117
Query: 40 VKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
TY+ NF + K P D++L GFPC FS AG
Sbjct: 118 NATYKDNFSGNYVKDTRDVRKVISFPKADLVLGGFPCPGFSVAG 161
>gi|283466067|emb|CBG92842.1| hypothetical protein [Enterococcus casseliflavus]
Length = 359
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF GIG L + + ++SEI ++ + FP+ + GD+ K+
Sbjct: 7 LTLGSLFDGIGVFPL----AAQKQGITLSWASEIEKAPIRITKKQFPHMIHLGDLTKLHG 62
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP D++ G PCQ S G
Sbjct: 63 GKIPPVDIVTFGSPCQNLSTIG 84
>gi|17225517|gb|AAL37447.1|AF328915_1 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 361
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
KI DLFCG GG LE + + + + + + T I GDI +I+
Sbjct: 3 YKILDLFCGAGGFSAGLECLKE---FDALIGLDCDKQALITFENNHKNATGICGDITQIE 59
Query: 61 TQDIP-------DHDVLLAGFPCQPFSQAG 83
++ + ++++ G PCQ FS G
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSNKG 89
>gi|57164173|ref|NP_001009473.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries]
gi|29536011|gb|AAO39704.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries]
Length = 1611
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N +T+ +
Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGSTVFTEYCNVLL 1192
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1193 KLVMGGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 1227
>gi|291165152|gb|ADD81179.1| gp74 [Rhodococcus phage ReqiPine5]
Length = 377
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M + +LF G GG L E + ++ T +A + + DIAK+
Sbjct: 1 MYDVVELFAGPGGTSEGLRMAAPDLKSN---GYEWDEHACATARAA-GHERVQADIAKVD 56
Query: 61 TQDIPD---HDVLLAGFPCQPFSQAG 83
+ +P+ ++ PCQ FS AG
Sbjct: 57 PRRVPELSAVHGVIGTPPCQGFSPAG 82
>gi|119511510|ref|ZP_01630619.1| type II DNA modification enzyme (methyltransferase) [Nodularia
spumigena CCY9414]
gi|119463821|gb|EAW44749.1| type II DNA modification enzyme (methyltransferase) [Nodularia
spumigena CCY9414]
Length = 371
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLF G GG+ L E + EI S TY+ N ++
Sbjct: 27 VIDLFGGCGGLALGFE----ATGFQTIGY-EILADSRATYEHNLLGVCNQVNLTPFSNLV 81
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
V++ G PCQPFS +G
Sbjct: 82 EGAA-VIIGGPPCQPFSVSG 100
>gi|86134515|ref|ZP_01053097.1| DNA (cytosine-5-)-methyltransferase [Polaribacter sp. MED152]
gi|85821378|gb|EAQ42525.1| DNA (cytosine-5-)-methyltransferase [Polaribacter sp. MED152]
Length = 583
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 9/84 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + D FCG GG + + ++ TY NF DI K K
Sbjct: 4 LTVIDFFCGAGGFSEGF----RQVGFKILEGFDNWQPAINTYNYNFDTESKLTDILKFKD 59
Query: 62 -----QDIPDHDVLLAGFPCQPFS 80
++PD D+++ PC FS
Sbjct: 60 SLEEIDNLPDSDIIIGSPPCVSFS 83
>gi|288919493|ref|ZP_06413824.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f]
gi|288349096|gb|EFC83342.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f]
Length = 640
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
DLF G GG+ L LEQ + + N +V+T++ANF + D+++ ++
Sbjct: 44 VDLFSGAGGLSLGLEQA----GWTVVTAVDDNLRAVETHRANFRGRAVQLDLSEPAARNE 99
Query: 65 -------PDHDVLLAGFPCQPFSQAG 83
D++ G PCQP+S+AG
Sbjct: 100 LLASLAGVKIDLVAGGPPCQPYSRAG 125
>gi|313661497|ref|NP_001186361.1| DNA (cytosine-5)-methyltransferase 1 isoform 3 [Mus musculus]
Length = 1501
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1023 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1079
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1080 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1114
>gi|327180734|ref|NP_034196.5| DNA (cytosine-5)-methyltransferase 1 isoform 2 [Mus musculus]
Length = 1619
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1141 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1197
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1198 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1232
>gi|148693195|gb|EDL25142.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_d [Mus musculus]
Length = 1619
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1141 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1197
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1198 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1232
>gi|148693196|gb|EDL25143.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_e [Mus musculus]
Length = 1604
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1126 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1182
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1183 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1217
>gi|148693197|gb|EDL25144.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_f [Mus musculus]
Length = 1638
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1160 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1216
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1217 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1251
>gi|148693194|gb|EDL25141.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_c [Mus musculus]
Length = 1683
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1205 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1261
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1262 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1296
>gi|148693193|gb|EDL25140.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_b [Mus musculus]
Length = 1645
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1167 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1223
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1224 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1258
>gi|31419356|gb|AAH53047.1| Dnmt1 protein [Mus musculus]
Length = 1627
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1149 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1205
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1206 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1240
>gi|2689716|gb|AAC40061.1| DNA (cytosine-5)-methyltransferase [Mus musculus]
Length = 1502
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1024 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1080
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1081 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1115
>gi|313661499|ref|NP_001186362.1| DNA (cytosine-5)-methyltransferase 1 isoform 4 [Mus musculus]
gi|7339827|gb|AAF60965.1| DNA methyltransferase [Mus musculus]
gi|9719249|gb|AAF97695.1| DNA (cytosine-5)-methyltransferase [Mus musculus]
gi|148693192|gb|EDL25139.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus]
gi|148693198|gb|EDL25145.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus]
Length = 1502
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1024 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1080
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1081 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1115
>gi|74151181|dbj|BAE27713.1| unnamed protein product [Mus musculus]
Length = 1619
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1141 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1197
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1198 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1232
>gi|1765919|emb|CAA32910.1| DNA methyltransferase 1 [Mus musculus]
Length = 1620
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1142 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1198
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1199 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1233
>gi|327180732|ref|NP_001186360.2| DNA (cytosine-5)-methyltransferase 1 isoform 1 [Mus musculus]
gi|20141336|sp|P13864|DNMT1_MOUSE RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
Short=Met-1; AltName: Full=DNA methyltransferase MmuI;
Short=DNA MTase MmuI; Short=M.MmuI; AltName: Full=MCMT
gi|6625687|gb|AAF19352.1| DNA methyltransferase [Mus musculus]
gi|37574019|gb|AAH48148.2| DNA methyltransferase (cytosine-5) 1 [Mus musculus]
Length = 1620
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1142 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1198
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1199 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1233
>gi|78189586|ref|YP_379924.1| C-5 cytosine-specific DNA methylase [Chlorobium chlorochromatii
CaD3]
gi|78171785|gb|ABB28881.1| C-5 cytosine-specific DNA methylase [Chlorobium chlorochromatii
CaD3]
Length = 359
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLFCGIGG+ L ++ +I+ +++ N I DI K++
Sbjct: 7 ISAIDLFCGIGGLTYGL----KKSGIQVKAGIDIDESCRYSFEENCGTKFINKDIQKLQK 62
Query: 62 QD------IPDHDVLLAGFPCQPFS 80
++ + +L+ PCQPFS
Sbjct: 63 EELNSIYGNAEIKILVGCAPCQPFS 87
>gi|242780736|ref|XP_002479658.1| C-5 cytosine methyltransferase DmtA [Talaromyces stipitatus ATCC
10500]
gi|218719805|gb|EED19224.1| C-5 cytosine methyltransferase DmtA [Talaromyces stipitatus ATCC
10500]
Length = 611
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
D FCG GG+ + + + + +I+ + KT+ NF ++ +
Sbjct: 297 YSFGDAFCGAGGVSVGAWKA----GLRVKYGIDIDKAACKTWGTNFVHSDCYHADFYSWI 352
Query: 61 --TQDIPDHDVLLAGFPCQPFSQA 82
D D+ + PCQPFS A
Sbjct: 353 ALQDDEVRVDISHSSPPCQPFSPA 376
>gi|332138119|pdb|3AV4|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1
gi|332138120|pdb|3AV5|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With
Adohcy
gi|332138121|pdb|3AV6|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With
Adomet
Length = 1330
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 852 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 908
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 909 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 943
>gi|295687890|ref|YP_003591583.1| DNA-cytosine methyltransferase [Caulobacter segnis ATCC 21756]
gi|295429793|gb|ADG08965.1| DNA-cytosine methyltransferase [Caulobacter segnis ATCC 21756]
Length = 379
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ +LFCG GG E + +++ +Y+ NFP T + + T
Sbjct: 1 MKLVELFCGTGGFSRGAHAA----GFEVAVAYDLDKTLTSSYEINFPQTKLRHEDVGELT 56
Query: 62 QDIPDHDV------LLAGFPCQPFSQAG 83
D +V L G PCQ FS G
Sbjct: 57 GDKIRAEVGDEVFGLFGGPPCQGFSDIG 84
>gi|313886494|ref|ZP_07820210.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas
asaccharolytica PR426713P-I]
gi|312924040|gb|EFR34833.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas
asaccharolytica PR426713P-I]
Length = 351
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLFCGIGG+ L + ++ +++ Y+ N I+ DI + ++
Sbjct: 5 VVDLFCGIGGLSYGLREA----GLQILAGYDLDQTCAFAYERNNNAQFIYKDIRMVSGKE 60
Query: 64 ------IPDHDVLLAGFPCQPFS 80
D VL PCQPFS
Sbjct: 61 VSTLLAETDVKVLAGCAPCQPFS 83
>gi|302870555|ref|YP_003839192.1| C-5 cytosine-specific DNA methylase [Micromonospora aurantiaca
ATCC 27029]
gi|302573414|gb|ADL49616.1| C-5 cytosine-specific DNA methylase [Micromonospora aurantiaca
ATCC 27029]
Length = 183
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+I + G GG+ + +E + + +E + ++ ++P+ GDI +
Sbjct: 10 RIGSVCTGYGGLDMAVE---LVLGGQLAWYAETDRHAATVLAHHWPDVDNLGDIRTVDWT 66
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D++ AGFPCQ S AG
Sbjct: 67 QVAPVDIVTAGFPCQDISNAG 87
>gi|317179558|dbj|BAJ57346.1| cytosine specific DNA methyltransferase [Helicobacter pylori F30]
Length = 355
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
KI DLFCG GG LE + + + + + + T + GDI +I+
Sbjct: 3 YKILDLFCGAGGFSAGLECLKE---FDALIGLDCDKQALITFENNHKNATGVCGDITQIE 59
Query: 61 TQDIP-------DHDVLLAGFPCQPFSQAG 83
++ + ++++ G PCQ FS G
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSNKG 89
>gi|261837515|gb|ACX97281.1| cytosine-methyltransferase [Helicobacter pylori 51]
Length = 355
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
KI DLFCG GG LE + + + + + + T + GDI +I+
Sbjct: 3 YKILDLFCGAGGFSAGLECLKE---FDALIGLDCDKQALITFENNHKNATGVCGDITQIE 59
Query: 61 TQDIP-------DHDVLLAGFPCQPFSQAG 83
++ + ++++ G PCQ FS G
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSNKG 89
>gi|322377723|ref|ZP_08052213.1| modification methylase HgiDII [Streptococcus sp. M334]
gi|321281488|gb|EFX58498.1| modification methylase HgiDII [Streptococcus sp. M334]
Length = 351
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 11/87 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLFCG+GG+ ++Q + +I+ S Y+ N I DI I+
Sbjct: 3 INAVDLFCGVGGLTYGIQQA----GINVVAGYDIDEKSKFAYEYNNDAKFILKDINGIED 58
Query: 62 QD-------IPDHDVLLAGFPCQPFSQ 81
+ D VL+ PCQPFS
Sbjct: 59 DEILGLYPSDTDIKVLIGCAPCQPFST 85
>gi|312385012|gb|EFR29606.1| hypothetical protein AND_01274 [Anopheles darlingi]
Length = 348
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIK 60
L++ +LF GIGG+R+ LE+T E + ++NP + Y NF G+I +
Sbjct: 13 LRVLELFSGIGGMRMALERTGRA--FEIVSAIDVNPIANSVYTHNFGEKAARNGNILSLT 70
Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83
+ I D +L PCQPF++ G
Sbjct: 71 AKTISKLAIDTVLMSPPCQPFTRNG 95
>gi|168207191|ref|ZP_02633196.1| modification methylase ScrFIB [Clostridium perfringens E str.
JGS1987]
gi|170661387|gb|EDT14070.1| modification methylase ScrFIB [Clostridium perfringens E str.
JGS1987]
Length = 310
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+KI +LF GIG R L V+ EI+ +V++Y F L + + +
Sbjct: 1 MIKILELFGGIGSPRKALVNLGVP--VKAIDYVEIDKKAVRSYNEMFKKDLKYKTQSVVG 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
P D+L+ G PCQ FS AG
Sbjct: 59 YNLKP--DILIHGSPCQSFSIAG 79
>gi|145630454|ref|ZP_01786235.1| modification methylase Bsp6I-like protein [Haemophilus influenzae
R3021]
gi|144984189|gb|EDJ91626.1| modification methylase Bsp6I-like protein [Haemophilus influenzae
R3021]
Length = 362
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--- 57
M + GI + + + + + SEI P+ ++PN GD+
Sbjct: 123 MFTYGSICSGIEAVSVAWKGLS-----KPLWFSEIEPFPCAVLAYHYPNIPNLGDMTTLP 177
Query: 58 -KIKTQDIPDHDVLLAGFPCQPFSQAG 83
KI ++IP DVL+ G PCQ FS AG
Sbjct: 178 EKILNREIPAPDVLVGGTPCQAFSVAG 204
>gi|315268237|gb|ADT95090.1| DNA-cytosine methyltransferase [Shewanella baltica OS678]
Length = 350
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 10/85 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ DLFCG GG+ L++ ++ +I P Y+ N I +A++
Sbjct: 3 IRAIDLFCGAGGLTHGLQRA----GIDVIAGYDIEPQCRYAYEKNNKAVFIQESVAELTE 58
Query: 62 QDIPDH------DVLLAGFPCQPFS 80
+ + V+ PCQPFS
Sbjct: 59 DEFSHYYGDADIRVMAGCAPCQPFS 83
>gi|312902260|ref|ZP_07761468.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX0635]
gi|310634319|gb|EFQ17602.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX0635]
Length = 359
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF GIG L + + ++SEI ++ + FP+ + GD+ K+
Sbjct: 7 LTLGSLFDGIGVFPL----AAQKQGITLSWASEIEKAPIRITKKQFPHMIHLGDLTKLHG 62
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP D++ G PCQ S G
Sbjct: 63 GKIPPVDIVTFGSPCQNLSTIG 84
>gi|311248707|ref|XP_003123295.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Sus scrofa]
Length = 1587
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N +T+ D +
Sbjct: 1111 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLL 1167
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1168 KLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 1202
>gi|301772046|ref|XP_002921451.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Ailuropoda melanoleuca]
Length = 1676
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N +T+ D +
Sbjct: 1199 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLL 1255
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1256 KLVMAGEATNPRGQKLPQKGDVEMLCGGPPCQGFS 1290
>gi|281337410|gb|EFB12994.1| hypothetical protein PANDA_010327 [Ailuropoda melanoleuca]
Length = 1576
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N +T+ D +
Sbjct: 1099 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLL 1155
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1156 KLVMAGEATNPRGQKLPQKGDVEMLCGGPPCQGFS 1190
>gi|222840488|gb|ACM68681.1| DNA methyltransferase 1 [Capra hircus]
Length = 1420
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N +T+ D +
Sbjct: 1063 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLL 1119
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1120 KLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 1154
>gi|194213189|ref|XP_001916472.1| PREDICTED: similar to DNA (cytosine-5)-methyltransferase 1 (Dnmt1)
(DNA methyltransferase HsaI) (DNA MTase HsaI) (MCMT)
(M.HsaI) (CXXC-type zinc finger protein 9) [Equus
caballus]
Length = 1615
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N +T+ D +
Sbjct: 1138 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLL 1194
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1195 KLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 1229
>gi|168805279|gb|ACA28713.1| DNA methyltransferase b [Bos taurus]
Length = 1348
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N +T+ D +
Sbjct: 855 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLL 911
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 912 KLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 946
>gi|119385904|ref|YP_916959.1| C-5 cytosine-specific DNA methylase [Paracoccus denitrificans
PD1222]
gi|119376499|gb|ABL71263.1| C-5 cytosine-specific DNA methylase [Paracoccus denitrificans
PD1222]
Length = 495
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGI-GGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
L++ DLF G GG L L + + EI + Y NFP+ + D+ +
Sbjct: 12 LRVLDLFSGAAGGWSLGLHRA----GFVTVAACEIVAWRRILYSENFPHVRLHEDVRTLT 67
Query: 61 TQD-----IPDHDVLLAGFPCQPFSQA 82
++++ PCQ S A
Sbjct: 68 AARLVSDLGGLPEIIVGSPPCQDISSA 94
>gi|317108162|ref|NP_872592.2| DNA (cytosine-5)-methyltransferase 1 [Bos taurus]
gi|108935977|sp|Q24K09|DNMT1_BOVIN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1
gi|89994055|gb|AAI14064.1| DNA (cytosine-5-)-methyltransferase 1 [Bos taurus]
gi|296485884|gb|DAA27999.1| DNA (cytosine-5)-methyltransferase 1 [Bos taurus]
Length = 1611
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N +T+ D +
Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLL 1192
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1193 KLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 1227
>gi|37728049|gb|AAO44952.1| cytosine-5-methyltransferase [Bos taurus]
Length = 1611
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N +T+ D +
Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLL 1192
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1193 KLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 1227
>gi|73986989|ref|XP_533919.2| PREDICTED: similar to DNA (cytosine-5)-methyltransferase 1 (Dnmt1)
(DNA methyltransferase HsaI) (DNA MTase HsaI) (MCMT)
(M.HsaI) [Canis familiaris]
Length = 1645
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N +T+ D +
Sbjct: 1170 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLL 1226
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1227 KLVMAGEATNSRGQKLPQKGDVEMLCGGPPCQGFS 1261
>gi|54022198|ref|YP_116440.1| putative DNA cytosine methyltransferase [Nocardia farcinica IFM
10152]
gi|54013706|dbj|BAD55076.1| putative DNA cytosine methyltransferase [Nocardia farcinica IFM
10152]
Length = 382
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ LF GIGG+ L L C EI+P + A FP+T + DI ++
Sbjct: 5 RMVGLFAGIGGLELGL----AAHGWTCELLCEIDPGAQAVLGARFPDTDLHADITALRAV 60
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
++ AGFPCQ SQAG
Sbjct: 61 PAGTE-LVAAGFPCQDLSQAG 80
>gi|6318608|gb|AAF06965.1|AF157599_4 EcoO109IM [Escherichia coli]
Length = 414
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 29/91 (31%), Gaps = 14/91 (15%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKT 61
K LF G G+ L LE+ E E + + + G I
Sbjct: 5 KFISLFSGAMGLDLGLEEA----GFELVACVEQDKAALKTIKTNKPNLAVFEGSIVDCTG 60
Query: 62 ---------QDIPDHDVLLAGFPCQPFSQAG 83
D + D++ G PCQ FS G
Sbjct: 61 SELLALAGVNDKEEIDLVAGGPPCQAFSVFG 91
>gi|291301680|ref|YP_003512958.1| C-5 cytosine-specific DNA methylase [Stackebrandtia nassauensis DSM
44728]
gi|290570900|gb|ADD43865.1| C-5 cytosine-specific DNA methylase [Stackebrandtia nassauensis DSM
44728]
Length = 329
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+I L GIG + + E + ++ +P + + P+ GDI +
Sbjct: 28 RIGSLCSGIGALDDAV---AAVTGAELAWVADTDPDAARVLTHRHPHAPNLGDIRTAPWE 84
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
D D+L+AG PCQP S+AG
Sbjct: 85 DAEPVDILVAGVPCQPVSKAG 105
>gi|74136491|ref|NP_001028141.1| DNA (cytosine-5)-methyltransferase 1 [Monodelphis domestica]
gi|22023943|gb|AAM89258.1|AF527541_1 cytosine-5-methyltransferase [Monodelphis domestica]
Length = 1514
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F + +
Sbjct: 1037 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1093
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1094 KLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 1128
>gi|330465519|ref|YP_004403262.1| DNA-cytosine methyltransferase [Verrucosispora maris AB-18-032]
gi|328808490|gb|AEB42662.1| DNA-cytosine methyltransferase [Verrucosispora maris AB-18-032]
Length = 392
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 10/87 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ F GIG +RL LE + +S++I P + Y +F + +
Sbjct: 17 TAAEFFAGIGLVRLGLEDA----GFKVIWSNDIEPDKKEMYVRHFNDPEGTHTYKRGDIA 72
Query: 63 DIPDHDVL------LAGFPCQPFSQAG 83
D+ ++ A FPC S AG
Sbjct: 73 DVRGPQMVDELSLAWASFPCTDLSLAG 99
>gi|302531731|ref|ZP_07284073.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302440626|gb|EFL12442.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length = 357
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 16/91 (17%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAKIKT 61
+F G+GG+ L E+ E + E + + T + NFP+ ++I DI + T
Sbjct: 8 ISVFSGVGGLDLGAEKA----GFEVRAAVERDVNAADTMRKNFPHLAGSVICADILDVPT 63
Query: 62 QDIP---------DHDVLLAGFPCQPFSQAG 83
+I D+L+ G PC PFS++G
Sbjct: 64 TEIMAAAGLSRRERPDLLIGGPPCTPFSKSG 94
>gi|217977517|ref|YP_002361664.1| DNA-cytosine methyltransferase [Methylocella silvestris BL2]
gi|217502893|gb|ACK50302.1| DNA-cytosine methyltransferase [Methylocella silvestris BL2]
Length = 393
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIKTQ 62
+ F G GG+ + +C F+++ + + Q N IFGD+AKI+
Sbjct: 8 YYEFFAG-GGMA----RAGLGDGWQCVFANDFSKMKAAAYIQNWGSNHFIFGDVAKIRPA 62
Query: 63 DIP-DHDVLLAGFPCQPFSQAG 83
D+P D+ A FPCQ S AG
Sbjct: 63 DMPGVADLAWASFPCQDLSLAG 84
>gi|189404646|ref|ZP_02809925.2| modification methylase SinI [Escherichia coli O157:H7 str. EC869]
gi|189375083|gb|EDU93499.1| modification methylase SinI [Escherichia coli O157:H7 str. EC869]
Length = 417
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 29/91 (31%), Gaps = 14/91 (15%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKT 61
K LF G G+ L LE+ E E + + + G I
Sbjct: 8 KFISLFSGAMGLDLGLEEA----GFELVACVEQDKAALKTIKTNKPNLAVFEGSIVDCTG 63
Query: 62 ---------QDIPDHDVLLAGFPCQPFSQAG 83
D + D++ G PCQ FS G
Sbjct: 64 SELLALAGVNDKEEIDLVAGGPPCQAFSVFG 94
>gi|188526860|ref|YP_001909547.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter
pylori Shi470]
gi|188143100|gb|ACD47517.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter
pylori Shi470]
Length = 355
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAK-- 58
KI DLFCG GG LE + + + + + + I GDI +
Sbjct: 3 YKILDLFCGAGGFSAGLECLKE---FDALIGLDCDKQALITFENNHKNAMGICGDITQAE 59
Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83
IK + ++++ G PCQ FS G
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSNKG 89
>gi|326790943|ref|YP_004308764.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427]
gi|326541707|gb|ADZ83566.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427]
Length = 292
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+ + LF GI + LE+ V+ +++SEI S+K + N+P + GDI I
Sbjct: 1 MNVLSLFDGISCGMVALERAG--IKVDNYYASEIEQDSIKISKKNYPWIIQLGDITNITK 58
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQ 81
I D+++ G PCQ S
Sbjct: 59 EMLDTIMPIDIVIGGSPCQDLSV 81
>gi|240119361|dbj|BAH79224.1| methylase EcoO109IM [Escherichia coli O157:H7]
Length = 414
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 29/91 (31%), Gaps = 14/91 (15%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKT 61
K LF G G+ L LE+ E E + + + G I
Sbjct: 5 KFISLFSGAMGLDLGLEEA----GFELVACVEQDKAALKTIKTNKPNLAVFEGSIVDCTG 60
Query: 62 ---------QDIPDHDVLLAGFPCQPFSQAG 83
D + D++ G PCQ FS G
Sbjct: 61 SELLALAGVNDKEEIDLVAGGPPCQAFSVFG 91
>gi|229490017|ref|ZP_04383870.1| modification methylase DdeI [Rhodococcus erythropolis SK121]
gi|229323118|gb|EEN88886.1| modification methylase DdeI [Rhodococcus erythropolis SK121]
Length = 431
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 31/88 (35%), Gaps = 11/88 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKT 61
+ F G GG+ E+ P + T+ NFP DI I
Sbjct: 92 TVLTAFSGCGGMAEGFRMA----GFSVEGYIEVVPEARATFDRNFPGARCLGEDIRAIDE 147
Query: 62 QDIPD------HDVLLAGFPCQPFSQAG 83
+ D DVL G PCQ FS AG
Sbjct: 148 ARVKDLLAQVDIDVLAGGPPCQGFSLAG 175
>gi|226307434|ref|YP_002767394.1| modification methylase [Rhodococcus erythropolis PR4]
gi|226186551|dbj|BAH34655.1| putative modification methylase [Rhodococcus erythropolis PR4]
Length = 444
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 31/88 (35%), Gaps = 11/88 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKT 61
+ F G GG+ E+ P + T+ NFP DI I
Sbjct: 105 TVLTAFSGCGGMAEGFRMA----GFSVEGYIEVVPEARATFDRNFPGARCLGEDIRAIDE 160
Query: 62 QDIPD------HDVLLAGFPCQPFSQAG 83
+ D DVL G PCQ FS AG
Sbjct: 161 ARVKDLLAQVDIDVLAGGPPCQGFSLAG 188
>gi|303274236|ref|XP_003056440.1| cytosine-specific DNA methylase [Micromonas pusilla CCMP1545]
gi|226462524|gb|EEH59816.1| cytosine-specific DNA methylase [Micromonas pusilla CCMP1545]
Length = 1085
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K LF GIGG+ L LE+ E E +P+ V+ Q FP + D+A+++
Sbjct: 1 MKTVSLFSGIGGLDLGLEEA----GHEVILQVENDPHCVQVLQRQFPGKALARDVAEVRD 56
Query: 62 QDIPDHDVLLAGFPCQPFSQ 81
+ ++L AGFPC S
Sbjct: 57 L-PEETELLAAGFPCPDVST 75
>gi|194098099|ref|YP_002001147.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae NCCP11945]
gi|239998556|ref|ZP_04718480.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae 35/02]
gi|240013681|ref|ZP_04720594.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae DGI18]
gi|240016120|ref|ZP_04722660.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae FA6140]
gi|240080261|ref|ZP_04724804.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae FA19]
gi|240112474|ref|ZP_04726964.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae MS11]
gi|240115214|ref|ZP_04729276.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae PID18]
gi|240120750|ref|ZP_04733712.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae PID24-1]
gi|240123054|ref|ZP_04736010.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae PID332]
gi|240125307|ref|ZP_04738193.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae SK-92-679]
gi|193933389|gb|ACF29213.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae NCCP11945]
gi|317163831|gb|ADV07372.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 347
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI--PDHDVLL 71
+ L Q E ++++ + ++ ++++ N + ++ GDI +I D PD D++L
Sbjct: 1 MDLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPNDPTIPDCDIIL 56
Query: 72 AGFPCQPFSQ 81
GFPCQ FS
Sbjct: 57 GGFPCQDFSM 66
>gi|255514225|gb|EET90487.1| DNA-cytosine methyltransferase [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 328
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 11/88 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKT 61
+ D+FCG GG ++ + +V T+ N ++ D+ +
Sbjct: 6 TVIDIFCGAGGFSQGFKEA----GYSILAGVDNWKPAVDTFSRNHKKSIGLEADMRSLTV 61
Query: 62 QDIP------DHDVLLAGFPCQPFSQAG 83
+ +V++ G PCQ FS G
Sbjct: 62 GQLKTLVSEAKVNVVIGGPPCQGFSMGG 89
>gi|307169339|gb|EFN62060.1| tRNA (cytosine-5-)-methyltransferase [Camponotus floridanus]
Length = 362
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
+K+ +L+ GIGG+ L ++ + + +INP + + L+ +I +
Sbjct: 1 MKVLELYSGIGGMHYALRES--EITAKVVAAIDINPVANAVYRENFPETILMNRNIESLN 58
Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83
Q++ D +L PCQPF++ G
Sbjct: 59 AQELNKLGLDAILMSPPCQPFTRLG 83
>gi|169825537|ref|YP_001695712.1| modification methylase [Lysinibacillus sphaericus C3-41]
gi|168994814|gb|ACA42353.1| Modification methylase [Lysinibacillus sphaericus C3-41]
Length = 296
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
++ F G GG+ L + + ++ S EI+ + T + NF + + DI KI
Sbjct: 12 LITAKSYFSGAGGLDLGIIEA----GIDVIESFEIDKKACNTLRNNFKHIINETDITKIT 67
Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81
D D DV + FPC +S
Sbjct: 68 VLDQQDADVYIGTFPCTKYSN 88
>gi|226349837|ref|YP_002776950.1| modification methylase [Rhodococcus opacus B4]
gi|226245752|dbj|BAH47019.1| modification methylase [Rhodococcus opacus B4]
Length = 428
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----A 57
++ ++ G GG L LE+ + E++ + T + N P+ +
Sbjct: 14 YQVVEICAGAGGQALGLEKA----GFSHKLAVELDTNACATLKLNRPDWDVEEGDVADPT 69
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
K + D+L G PC PFS AG
Sbjct: 70 VWKPSEHEGVDLLAGGVPCPPFSIAG 95
>gi|110765384|ref|XP_001122269.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Apis mellifera]
Length = 1427
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK D+F G GG+ L Q V+ ++ E + + Y+ N PNT +F + +
Sbjct: 956 LKTLDVFAGCGGLSEGLRQAGI---VDNQWAIEKDEPAACAYRLNNPNTTVFCEDCNVLL 1012
Query: 62 QDIPDHD----------------VLLAGFPCQPFS 80
+ + + D +L G PCQ FS
Sbjct: 1013 RKVMNGDLCDNNGQRLPQKGEVELLCGGPPCQGFS 1047
>gi|332288285|ref|YP_004419137.1| C-5 cytosine-specific DNA methylase [Gallibacterium anatis
UMN179]
gi|330431181|gb|AEC16240.1| C-5 cytosine-specific DNA methylase [Gallibacterium anatis
UMN179]
Length = 349
Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI- 59
M++ DLFCG GG+ L++ V+ +I ++ N + + D++ +
Sbjct: 1 MIEAVDLFCGAGGLTAGLQKA----GVKVKAGYDIEEACRYPFEFNNNASFVNKDVSLVS 56
Query: 60 -----KTQDIPDHDVLLAGFPCQPFSQ 81
+ + +L PCQPFS+
Sbjct: 57 GTEVMQWYNQKAIRLLAGCAPCQPFSK 83
>gi|331086924|ref|ZP_08336001.1| hypothetical protein HMPREF0987_02304 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410090|gb|EGG89525.1| hypothetical protein HMPREF0987_02304 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 438
Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 37/107 (34%), Gaps = 28/107 (26%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---------TL 51
M DLFCG GG L Q FSS+I+ TY
Sbjct: 1 MPYAVDLFCGAGGCSEGLIQA----GFHILFSSDISDMVELTYTHRHEQLGLIQGKNTWF 56
Query: 52 IFGDIAKIKTQD---------------IPDHDVLLAGFPCQPFSQAG 83
DI + D +P+ D+++ G CQ FS+AG
Sbjct: 57 ERSDIRDLTGNDIRKYITNLEIFKGKEMPEIDLMIGGPSCQGFSRAG 103
>gi|290968468|ref|ZP_06560007.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
gi|290781464|gb|EFD94053.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
Length = 699
Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAK-- 58
+I DLFCG GG+ + + + + +IN + + + LI GDI
Sbjct: 338 FRILDLFCGAGGMSYGMH---KNSHFVTKVALDINEKLAQTFKENIPESELIIGDIQDKA 394
Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83
I ++++ G PCQ FS G
Sbjct: 395 IKEKIINLSKKNKVNMIIGGPPCQGFSLKG 424
>gi|213403582|ref|XP_002172563.1| tRNA (cytosine-5-)-methyltransferase [Schizosaccharomyces
japonicus yFS275]
gi|212000610|gb|EEB06270.1| tRNA (cytosine-5-)-methyltransferase [Schizosaccharomyces
japonicus yFS275]
Length = 326
Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ +L+ GIGG+ L++ + + + + +INP + + Y NF DI+ +
Sbjct: 8 LRVLELYSGIGGMHFALQKL--NIDFKVVLAVDINPLANQIYNENFGKIAKHYDISTLTK 65
Query: 62 Q--DIPDHDVLLAGFPCQPFSQAG 83
+ D D+ CQP+++ G
Sbjct: 66 EQLDALRCDLWTLSPSCQPYTRLG 89
>gi|86131659|ref|ZP_01050257.1| DNA (cytosine-5-)-methyltransferase [Dokdonia donghaensis MED134]
gi|85818104|gb|EAQ39272.1| DNA (cytosine-5-)-methyltransferase [Dokdonia donghaensis MED134]
Length = 409
Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 31/128 (24%), Gaps = 50/128 (39%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L DLF G GG+ + + EI+ + T + + + K
Sbjct: 4 LNFIDLFSGAGGLSEGFIKA----GFKPIAHVEIDKKACDTLETRLIYHKLNSENKTEKY 59
Query: 62 QDI----------------------------------------------PDHDVLLAGFP 75
D D+++ G P
Sbjct: 60 YDYISEKITREEFIKTFSNSELSNSVINIPIGGKNNKIIFDKIDTLAKGKQIDLIIGGPP 119
Query: 76 CQPFSQAG 83
CQ +S G
Sbjct: 120 CQAYSLVG 127
>gi|299065029|emb|CBJ36133.1| DNA-cytosine methyltransferase [Ralstonia solanacearum CMR15]
Length = 385
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKI 59
M + F G GG+ + +C F+++ + V Q + L+ GD+ ++
Sbjct: 1 MGSFYEFFAG-GGMA----RAGLGEGWQCLFANDFDHKKGVTYRQNWGEDELLTGDVRQV 55
Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83
K ++PD +++ FPCQ S AG
Sbjct: 56 KPNNLPDRANLIWGSFPCQDLSLAG 80
>gi|29566171|ref|NP_817742.1| gp65 [Mycobacterium phage Che9c]
gi|29424896|gb|AAN12623.1| gp65 [Mycobacterium phage Che9c]
Length = 513
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
ML +TDLFCG GG VE S+ + + + D+++I
Sbjct: 1 MLTLTDLFCGAGGSSTG---AIEIPGVEVRVASNHWDLAVETHNTNHPDADHVCADLSQI 57
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ P D+L A C S A
Sbjct: 58 DPRRFPRTDILWASPECTNHSVA 80
>gi|262192113|ref|ZP_06050275.1| DNA-cytosine methyltransferase [Vibrio cholerae CT 5369-93]
gi|262032024|gb|EEY50600.1| DNA-cytosine methyltransferase [Vibrio cholerae CT 5369-93]
Length = 393
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 34/98 (34%), Gaps = 22/98 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
+K DLF G GG L V + E + + TY+ NF
Sbjct: 3 IKAIDLFAGAGGFTLSAIHA----GVSVLAAIEFDEAAANTYKENFIKAGKHNIDLRAGK 58
Query: 55 ---DIAKIKTQD--------IPDHDVLLAGFPCQPFSQ 81
DI + + + D++L G PCQ FS
Sbjct: 59 DFGDINNVDPLELRDSLGLKKGELDLILGGPPCQGFST 96
>gi|237731054|ref|ZP_04561535.1| DNA-cytosine methyltransferase [Citrobacter sp. 30_2]
gi|226906593|gb|EEH92511.1| DNA-cytosine methyltransferase [Citrobacter sp. 30_2]
Length = 411
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIK 60
+ F G GG+ + C F+++++P + D+ +I
Sbjct: 20 FSFYEFFAG-GGMA----RAGLGNPWRCLFANDMDPIKASTYIDNWGGEHFDTRDVREIP 74
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
+ D+P H D+ A FPCQ S AG
Sbjct: 75 SNDLPRHADLTWASFPCQDLSLAG 98
>gi|329890824|ref|ZP_08269167.1| cytosine-specific methyltransferase NlaX [Brevundimonas diminuta
ATCC 11568]
gi|328846125|gb|EGF95689.1| cytosine-specific methyltransferase NlaX [Brevundimonas diminuta
ATCC 11568]
Length = 395
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN--PYSVKTYQANFPNTLIFGDIAK 58
M + F G G + + C F+++ + L GDI
Sbjct: 1 MADFYEFFAGAG-----MARAGLGDGWTCQFANDFDGKKGLTYQANWGTGGELHVGDIRN 55
Query: 59 IKTQDIP-DHDVLLAGFPCQPFSQAG 83
++TQ +P + D++ FPCQ S AG
Sbjct: 56 VETQQLPGEADLIWGSFPCQDLSLAG 81
>gi|254488706|ref|ZP_05101911.1| C-5 cytosine-specific DNA methylase [Roseobacter sp. GAI101]
gi|214045575|gb|EEB86213.1| C-5 cytosine-specific DNA methylase [Roseobacter sp. GAI101]
Length = 384
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61
K + FCG G +R L+ +C +++I+P Y+ N+ GDIA +
Sbjct: 10 KYAEFFCGGGMVRAALQD-----RWDCVLANDIDPMKCAVYERNWGQEALHQGDIATLPD 64
Query: 62 QD-IPDHDVLLAGFPCQPFSQAG 83
D+ A PCQ FS AG
Sbjct: 65 AKLRQPIDLYWASSPCQDFSLAG 87
>gi|73853882|ref|NP_001027526.1| DNA (cytosine-5)-methyltransferase 1 [Sus scrofa]
gi|66363554|gb|AAY45793.1| DNA methyltransferase 1 [Sus scrofa]
Length = 1610
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N +T+ D +
Sbjct: 1135 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAHAFRLNNPGSTVFTEDCNVLL 1191
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1192 KLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 1226
>gi|15894505|ref|NP_347854.1| DNA-methyltransferase (cytosine-specific) [Clostridium
acetobutylicum ATCC 824]
gi|15024146|gb|AAK79194.1|AE007635_8 DNA-methyltransferase (cytosine-specific) [Clostridium
acetobutylicum ATCC 824]
gi|325508636|gb|ADZ20272.1| DNA-methyltransferase (cytosine-specific) [Clostridium
acetobutylicum EA 2018]
Length = 314
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
++K +LF GIG R + ++ EI+P VKTY F L++ I
Sbjct: 6 IIKTLELFGGIGAPRKAFKNIGID--IKAIDYVEIDPKPVKTYNEMFKKDLMYKTQNVIG 63
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
P DVL+ G PCQ FS AG
Sbjct: 64 YNLKP--DVLIHGSPCQDFSIAG 84
>gi|319779704|ref|YP_004130617.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9]
gi|317109728|gb|ADU92474.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9]
Length = 339
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+DLF G+GG R+ E +C FS E N ++ +TY NF L + DI I
Sbjct: 12 FTFSDLFAGMGGFRVAFE----SLGAKCVFSCENNTFAKETYWINFK-ELTYDDIYTIPM 66
Query: 62 QDIPDHDVLLAGFP 75
+PDHD++ AGFP
Sbjct: 67 DIVPDHDIMCAGFP 80
>gi|240127759|ref|ZP_04740420.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
gonorrhoeae SK-93-1035]
Length = 347
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI--PDHDVLL 71
+ L Q E ++++ + ++ ++++ N + ++ GDI +I D PD D++L
Sbjct: 1 MDLGFHQA----GCETVWANDFSHWACESFRKNIGDVIVEGDIEQINPNDPTIPDCDIIL 56
Query: 72 AGFPCQPFSQ 81
GFPCQ FS
Sbjct: 57 GGFPCQDFSM 66
>gi|46048774|ref|NP_996835.1| DNA (cytosine-5)-methyltransferase 1 [Gallus gallus]
gi|12230343|sp|Q92072|DNMT1_CHICK RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=DNA methyltransferase GgaI; Short=DNA MTase
GgaI; Short=M.GgaI; AltName: Full=MCMT
gi|1109610|dbj|BAA07867.1| DNA (cytosine-5-)-methyltransferase [Gallus gallus]
gi|1096715|prf||2112268A DNA methyltransferase
Length = 1537
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F + +
Sbjct: 1054 LRTLDVFSGCGGLSEGFHQAGVS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1110
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1111 KLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 1145
>gi|332664528|ref|YP_004447316.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332333342|gb|AEE50443.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
Length = 420
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 32/127 (25%), Gaps = 49/127 (38%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT------YQANFPNTLIFGD 55
DLF G GG+ Q E E+ + T Y N
Sbjct: 3 YNFIDLFAGAGGLSEGFIQA----GFEPIAHVELEKSACNTLKTRAAYHYLKSNKRHEIY 58
Query: 56 IAKIKTQD---------------------------------------IPDHDVLLAGFPC 76
I+ +K + D+++ G PC
Sbjct: 59 ISYLKGEITRAELYDNVPNEILASVINLSIGDENNNLIFNQIDSYLGKGAVDLIIGGPPC 118
Query: 77 QPFSQAG 83
Q +S AG
Sbjct: 119 QAYSVAG 125
>gi|317481261|ref|ZP_07940332.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36]
gi|316902594|gb|EFV24477.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36]
Length = 461
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
LF G E F E+N + + FPN+ + DIAK +
Sbjct: 5 HGSLFSG---FD-APSIASFQMGWENAFHCEVNDFCNIILKYWFPNSEHYEDIAKTDFKK 60
Query: 64 I-PDHDVLLAGFPCQPFSQAG 83
D+L GFPCQPFS AG
Sbjct: 61 WRGKIDILTGGFPCQPFSVAG 81
>gi|315583649|pdb|3PT9|A Chain A, Crystal Structure Of Mouse Dnmt1(731-1602) In The Free
State
Length = 873
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 413 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 469
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 470 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 504
>gi|312137784|ref|YP_004005120.1| DNA (cytosine-5-)-methyltransferase [Rhodococcus equi 103S]
gi|311887123|emb|CBH46432.1| DNA (cytosine-5-)-methyltransferase [Rhodococcus equi 103S]
Length = 387
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ LF GIGG+ L L E EI+P + + + F + + GD+ ++++
Sbjct: 6 NMVGLFAGIGGVELGL----RSHGWETELLCEIDPGAQQVLRTRFADVELHGDVTRLRSL 61
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+++ AGFPCQ SQAG
Sbjct: 62 -PQRTELVAAGFPCQDLSQAG 81
>gi|332665156|ref|YP_004447944.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332333970|gb|AEE51071.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
Length = 416
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 35/106 (33%), Gaps = 28/106 (26%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
+ LF G GG+ + LEQ E + T + N P L+F
Sbjct: 27 YNVVSLFSGAGGLDIGLEQA----GFRTAVCVENDLNCRTTLRHNRPEWLLFDHPTKVLN 82
Query: 56 ----------IAKIKTQD--------IPDHDVLLAGFPCQPFSQAG 83
I I ++ +++ G PCQPFS G
Sbjct: 83 EKIITRAPGDIRHIDAEELLEFAGLKPGKVALVVGGAPCQPFSNIG 128
>gi|296112182|ref|YP_003622593.1| putative C-5 cytosine-specific DNA methylase [Thiomonas sp. 3As]
gi|294341994|emb|CAZ90422.1| putative C-5 cytosine-specific DNA methylase [Thiomonas sp. 3As]
Length = 304
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
+K DLF G GG Q VE +++ P + + D+ +
Sbjct: 1 MKAIDLFSGAGGFTEGARQA----GVEVCWAANHWPAAVACHSANHPEAVHACQDLEQAD 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
+ +P HDVL+A CQ S A
Sbjct: 57 WRAVPAHDVLMASPACQGHSPA 78
>gi|229825108|ref|ZP_04451177.1| hypothetical protein GCWU000182_00458 [Abiotrophia defectiva ATCC
49176]
gi|331003746|ref|ZP_08327240.1| hypothetical protein HMPREF0491_02102 [Lachnospiraceae oral taxon
107 str. F0167]
gi|229790480|gb|EEP26594.1| hypothetical protein GCWU000182_00458 [Abiotrophia defectiva ATCC
49176]
gi|330412129|gb|EGG91524.1| hypothetical protein HMPREF0491_02102 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 305
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 32/88 (36%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
L LF GIGGI L E E + + ++P F DI
Sbjct: 4 LTHFSLFTGIGGIDLAAEAA----GFSTICQCEWADFPTAVLKKHWPKVPRFQDITTVTK 59
Query: 58 --KIKTQDIPDHDVLLAGFPCQPFSQAG 83
I+ ++ GFPCQPFS G
Sbjct: 60 EAFIEKTGQESVTLISGGFPCQPFSAIG 87
>gi|257867242|ref|ZP_05646895.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC30]
gi|257873577|ref|ZP_05653230.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC10]
gi|257801298|gb|EEV30228.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC30]
gi|257807741|gb|EEV36563.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC10]
Length = 373
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF GIG L + + ++SEI ++ + FP+ + GD+ K+
Sbjct: 21 LTLGSLFDGIGVFPL----AAQKQGITLSWASEIEKAPIRITKKQFPHMIHLGDLTKLHG 76
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP D++ G PCQ S G
Sbjct: 77 GKIPPVDIVTFGSPCQNLSTIG 98
>gi|8132067|gb|AAF73200.1|AF152342_1 DNA-(cytosine-5)-methyltransferase [Xiphophorus maculatus x
Xiphophorus helleri]
Length = 1503
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+ D+F G GG+ Q E ++ E+ + + ++ N P T +F + +
Sbjct: 1025 YRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1081
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1082 KLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 1116
>gi|332852917|ref|XP_512361.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 11 [Pan
troglodytes]
Length = 1632
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 1155 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 1211
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1212 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1246
>gi|297703536|ref|XP_002828696.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Pongo abelii]
Length = 1664
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 1187 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 1243
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1244 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1278
>gi|168277642|dbj|BAG10799.1| DNA (cytosine-5)-methyltransferase 1 [synthetic construct]
Length = 1498
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 1018 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 1074
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1075 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1109
>gi|119604485|gb|EAW84079.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens]
gi|119604486|gb|EAW84080.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens]
Length = 1678
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 1201 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 1257
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1258 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1292
>gi|195927037|ref|NP_001124295.1| DNA (cytosine-5)-methyltransferase 1 isoform a [Homo sapiens]
gi|116496659|gb|AAI26228.1| DNMT1 protein [Homo sapiens]
gi|219521538|gb|AAI44094.1| DNA (cytosine-5-)-methyltransferase 1 [Homo sapiens]
Length = 1632
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 1155 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 1211
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1212 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1246
>gi|114675302|ref|XP_001163722.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 1 isoform 9 [Pan
troglodytes]
Length = 1671
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 1194 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 1250
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1251 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1285
>gi|114675322|ref|XP_001163364.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 1 isoform 1 [Pan
troglodytes]
Length = 1502
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 1194 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 1250
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1251 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1285
>gi|114675312|ref|XP_001163590.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 6 [Pan
troglodytes]
Length = 1519
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 1042 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 1098
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1099 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1133
>gi|114675304|ref|XP_001163764.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 10 [Pan
troglodytes]
Length = 1678
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 1201 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 1257
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1258 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1292
>gi|114675320|ref|XP_001163398.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 1 isoform 2 [Pan
troglodytes]
Length = 1546
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 1194 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 1250
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1251 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1285
>gi|114675318|ref|XP_001163512.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 1 isoform 4 [Pan
troglodytes]
Length = 1632
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 1194 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 1250
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1251 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1285
>gi|114675308|ref|XP_001163659.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase (EC
2.1.1.37) - human isoform 7 [Pan troglodytes]
gi|114675310|ref|XP_001163694.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase (EC
2.1.1.37) - human isoform 8 [Pan troglodytes]
Length = 1495
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 1018 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 1074
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1075 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1109
>gi|67970373|dbj|BAE01529.1| unnamed protein product [Macaca fascicularis]
Length = 493
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 238 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 294
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 295 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 329
>gi|62088406|dbj|BAD92650.1| DNA (cytosine-5-)-methyltransferase 1 variant [Homo sapiens]
Length = 1606
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 1126 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 1182
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1183 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1217
>gi|62204780|gb|AAH92517.1| DNMT1 protein [Homo sapiens]
Length = 1511
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 1034 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 1090
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1091 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1125
>gi|4503351|ref|NP_001370.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Homo sapiens]
gi|12231019|sp|P26358|DNMT1_HUMAN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=CXXC-type zinc finger protein 9; AltName:
Full=DNA methyltransferase HsaI; Short=DNA MTase HsaI;
Short=M.HsaI; AltName: Full=MCMT
gi|1632819|emb|CAA45219.1| DNA (cytosine-5-)-methyltransferase [Homo sapiens]
Length = 1616
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 1139 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 1195
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1196 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 1230
>gi|332253285|ref|XP_003275776.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 1 [Nomascus
leucogenys]
gi|332253287|ref|XP_003275777.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 2 [Nomascus
leucogenys]
gi|332253289|ref|XP_003275778.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 3 [Nomascus
leucogenys]
Length = 1347
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 870 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 926
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 927 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 961
>gi|119386086|ref|YP_917141.1| C-5 cytosine-specific DNA methylase [Paracoccus denitrificans
PD1222]
gi|119376681|gb|ABL71445.1| C-5 cytosine-specific DNA methylase [Paracoccus denitrificans
PD1222]
Length = 502
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGI-GGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
L + DLF G GG L L + + EI + Y NFP+ ++ DI +
Sbjct: 12 LHVLDLFSGAAGGWSLGLHRA----GFMTIAACEIVEWRRILYSENFPHVRLYADIRDLT 67
Query: 61 TQD-----IPDHDVLLAGFPCQPFSQA 82
D+++ PCQ S A
Sbjct: 68 ATRLVSDLGCLPDIVVGSPPCQDISSA 94
>gi|210621902|ref|ZP_03292899.1| hypothetical protein CLOHIR_00844 [Clostridium hiranonis DSM 13275]
gi|210154533|gb|EEA85539.1| hypothetical protein CLOHIR_00844 [Clostridium hiranonis DSM 13275]
Length = 438
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 39/107 (36%), Gaps = 28/107 (26%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---------TL 51
M DLFCG GG L Q FSS+I+ TY+
Sbjct: 1 MPYAVDLFCGAGGCSEGLIQA----GFHILFSSDISEMVEVTYKNRHEQLGLIQGKNTWF 56
Query: 52 IFGDIAKI---------------KTQDIPDHDVLLAGFPCQPFSQAG 83
DI + K Q IP+ D+L+ G CQ FS+AG
Sbjct: 57 ERSDIRDLTGETIFKCIESLDIFKNQKIPEIDLLIGGPSCQGFSRAG 103
>gi|209543149|ref|YP_002275378.1| C-5 cytosine-specific DNA methylase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530826|gb|ACI50763.1| C-5 cytosine-specific DNA methylase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 484
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGI-GGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
++ DLF G GG L L + + EI P+ Y N P+ ++ D+ +
Sbjct: 17 FRVLDLFAGAAGGWTLGLHRA----GFVTVAACEIVPWRRVLYAENNPHVRLYDDVRTLT 72
Query: 61 TQD-----IPDHDVLLAGFPCQPFSQA 82
D++ PCQ S A
Sbjct: 73 AGRLVSDLGFLPDLIAGSPPCQDISSA 99
>gi|324993630|gb|EGC25549.1| modification methylase HgiDII [Streptococcus sanguinis SK405]
gi|324995058|gb|EGC26971.1| modification methylase HgiDII [Streptococcus sanguinis SK678]
gi|327462899|gb|EGF09220.1| modification methylase HgiDII [Streptococcus sanguinis SK1]
Length = 352
Score = 61.5 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLFCG+GG+ ++Q + +I+ S Y+ N I DI +I+
Sbjct: 3 INAIDLFCGVGGLTYGVQQA----GINVVAGYDIDDKSKFAYEYNNDAKFILKDIKEIED 58
Query: 62 QD-------IPDHDVLLAGFPCQPFS 80
+ D +L+ PCQPFS
Sbjct: 59 DEILALYPKDTDIKILIGCAPCQPFS 84
>gi|257421714|ref|ZP_05598704.1| predicted protein [Enterococcus faecalis X98]
gi|257163538|gb|EEU93498.1| predicted protein [Enterococcus faecalis X98]
Length = 286
Score = 61.5 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
F G GG+ L + Q + S EI+ T + NF + + DI+KI D
Sbjct: 7 SYFSGAGGMDLGMLQA----GINVVESFEIDKKCCATLRKNFNHKVNECDISKITVLDQQ 62
Query: 66 DHDVLLAGFPCQPFS 80
D DV + FPC +S
Sbjct: 63 DADVYIGTFPCTKYS 77
>gi|320120362|gb|EFE28316.2| DNA (cytosine-5-)-methyltransferase [Filifactor alocis ATCC
35896]
Length = 363
Score = 61.5 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GIG L + ++ ++SEI + + +FPN GDI KIK
Sbjct: 4 IKLGSLFDGIGVFPL----AASRCHIVPVWASEIEKVPMSITKRHFPNMEHLGDITKIKG 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+I ++ G PCQ S AG
Sbjct: 60 GEITPVHIITFGSPCQNLSLAG 81
>gi|329122250|ref|ZP_08250838.1| DNA (cytosine-5-)-methyltransferase [Haemophilus aegyptius ATCC
11116]
gi|327473811|gb|EGF19228.1| DNA (cytosine-5-)-methyltransferase [Haemophilus aegyptius ATCC
11116]
Length = 387
Score = 61.5 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--- 57
M + GI + + + + + SEI P+ ++PN GD+
Sbjct: 1 MFTYGSICSGIEAVSVAWKGLS-----KPLWFSEIEPFPCAVLAYHYPNIPNLGDMTTLP 55
Query: 58 -KIKTQDIPDHDVLLAGFPCQPFSQAG 83
KI ++IP DVL+ G PCQ FS AG
Sbjct: 56 EKILNREIPAPDVLVGGTPCQAFSVAG 82
>gi|319645695|ref|ZP_07999926.1| DNA-cytosine methyltransferase [Bacillus sp. BT1B_CT2]
gi|317392242|gb|EFV73038.1| DNA-cytosine methyltransferase [Bacillus sp. BT1B_CT2]
Length = 327
Score = 61.5 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+KI +LF GIG R L + EI+ +V+ Y A + + +
Sbjct: 1 MIKILELFGGIGAPRKALVNLGVD--HKAIDYVEIDEKAVRAYNALYDHRYKPQSVVGYD 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
DVL+ G PCQ FS+AG
Sbjct: 59 L----RPDVLVHGSPCQDFSRAG 77
>gi|225849813|ref|YP_002730047.1| putative modification methylase FnuDI [Persephonella marina
EX-H1]
gi|225646519|gb|ACO04705.1| putative modification methylase FnuDI [Persephonella marina
EX-H1]
Length = 307
Score = 61.5 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ DLFCG+GG L + +IN + K ++ N I D+
Sbjct: 1 MKVLDLFCGMGGFSYGLSKAGYEITG-----VDINKWVEKIFEKNCIGKAIIKDLKNDFI 55
Query: 62 QDIPDHDVLLAGFPCQPFSQ 81
D + D+++ G PC+P+S
Sbjct: 56 FD-ENPDIIVGGSPCKPWST 74
>gi|112983430|ref|NP_001036980.1| DNA cytosine-5 methyltransferase [Bombyx mori]
gi|54888739|dbj|BAD67189.1| DNA cytosine-5 methyltransferase [Bombyx mori]
Length = 1409
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
L+ D+F G GG+ L Q EC ++ E + Y N + ++F +
Sbjct: 946 LRTLDVFAGCGGLSEGLHQAGVA---ECKWAIENVEAASHAYSLNNKSCIVFNEDCNALL 1002
Query: 59 -------------IKTQDIPDHDVLLAGFPCQPFS 80
++ + ++L G PCQ FS
Sbjct: 1003 KTVMSGAKHSANGLRLPMQGEVELLCGGPPCQGFS 1037
>gi|226363491|ref|YP_002781273.1| modification methylase [Rhodococcus opacus B4]
gi|226241980|dbj|BAH52328.1| modification methylase [Rhodococcus opacus B4]
Length = 381
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ LF GIGG+ L L EI+P + + F + + D+ K+++
Sbjct: 1 MVGLFAGIGGLELGL----REHGWNTELLCEIDPGAQAVLRTRFTDVPVHSDVTKLRSL- 55
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
+ +++ AGFPCQ SQAG
Sbjct: 56 PQNIELVAAGFPCQDLSQAG 75
>gi|325564098|gb|ADZ31419.1| M.SfoI [Serratia fonticola]
Length = 385
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ + F G+G +R LE +C ++++I+ + TY N+ + +
Sbjct: 1 MRFAEFFAGVGLVREGLE----GSGWQCVWANDISADKMSTYVENYGDDHFHLEDIWKVA 56
Query: 62 QDI-----PDHDVLLAGFPCQPFSQAG 83
+ D + A FPC S AG
Sbjct: 57 AEPDGILPKDVFLYTASFPCTDLSVAG 83
>gi|125974253|ref|YP_001038163.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC
27405]
gi|125714478|gb|ABN52970.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC
27405]
Length = 350
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 9/91 (9%)
Query: 2 LKI--TDLFCGIGGIRLDLEQT-FNHRNVECF--FSSEINPYSVKTYQANFPNTLI---- 52
+K +LFCG GG+ + ++ ++++ + + TY N
Sbjct: 1 MKFELGELFCGPGGLAYGAKTAEIENKEYRIIHKWANDYDRDTCDTYIHNICPDNPESVI 60
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ K+ + D L GFPC FS G
Sbjct: 61 CQDVRKLNIDSLQPIDALAFGFPCNDFSVVG 91
>gi|308061350|gb|ADO03238.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Cuz20]
Length = 355
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
KI DLFCG GG LE+ + + + + + + T + GDI +I+
Sbjct: 3 YKILDLFCGAGGFSAGLERLKE---FDALIGLDCDKQALITFENNHKNATGVCGDITQIE 59
Query: 61 TQDIP-------DHDVLLAGFPCQPFSQAG 83
++ ++++ G PCQ FS G
Sbjct: 60 IKEKVIKLAQTLKINMIIGGPPCQGFSNKG 89
>gi|296448772|ref|ZP_06890624.1| DNA-cytosine methyltransferase [Methylosinus trichosporium OB3b]
gi|296253709|gb|EFH00884.1| DNA-cytosine methyltransferase [Methylosinus trichosporium OB3b]
Length = 297
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K LF GIGG+ L L + EC +E P + A FP GDIA ++
Sbjct: 1 MKTVGLFAGIGGLELGLARA----GHECLLVAENWPLAAGVLAARFPGLPNAGDIASLRR 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+++ AGFPCQ SQAG
Sbjct: 57 L-PGGTELVAAGFPCQDLSQAG 77
>gi|242022906|ref|XP_002431878.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus
corporis]
gi|212517219|gb|EEB19140.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus
corporis]
Length = 1330
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
L+ D+F G GG+ L Q+ + ++ E + + ++ N PN +F +
Sbjct: 872 LRTLDVFAGCGGLSEGLHQSGVS---KTLWAIEQDSDAASAFKQNNPNATVFTEDCNTLL 928
Query: 59 -------------IKTQDIPDHDVLLAGFPCQPFS 80
+ D++ G PCQ FS
Sbjct: 929 KEVMSGKLKNDKGQCLPQKGEVDLICGGPPCQGFS 963
>gi|317506240|ref|ZP_07964059.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC
BAA-974]
gi|316255486|gb|EFV14737.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC
BAA-974]
Length = 347
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I DLF G+GG L H EI+P + T +A + ++ D+ + D
Sbjct: 2 ILDLFSGVGGWLEGLGPGVPHVG------VEIDPDAAATSRAA-GHNVVQADVTLLDPSD 54
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
+ A PCQ FS AG
Sbjct: 55 YSGIVGITASPPCQSFSVAG 74
>gi|283549176|ref|NP_001164521.1| DNA methyltransferase 1a [Nasonia vitripennis]
Length = 1349
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 18/94 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ D+F G GG+ L Q E ++ E++ + Y+ N PN +F
Sbjct: 880 LRTLDVFAGCGGLSEGLHQAGVA---ESSWAIEVDEAAAHAYRLNNPNAAVFTGDCNAYL 936
Query: 62 QD---------------IPDHDVLLAGFPCQPFS 80
+ + D+L G PCQ FS
Sbjct: 937 KKVMDGETMAGGQRLPQRGEVDLLCGGPPCQGFS 970
>gi|156541588|ref|XP_001600175.1| PREDICTED: similar to DNA (cytosine-5)-methyltransferase [Nasonia
vitripennis]
Length = 1392
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 18/94 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ D+F G GG+ L+Q E ++ E + + Y+ N P +F
Sbjct: 918 LRTLDVFAGCGGLSEGLKQAGVA---ESLWAIENDTAAAHAYRLNNPKASVFTTDCNSFL 974
Query: 62 ---------------QDIPDHDVLLAGFPCQPFS 80
+ D+L G PCQ FS
Sbjct: 975 EKVINGETSLGGQSLPKKGEVDLLCGGPPCQGFS 1008
>gi|326789360|ref|YP_004307181.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427]
gi|326540124|gb|ADZ81983.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427]
Length = 446
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 15/91 (16%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGDIA 57
+ D+F G GG+ L ++ + E+ P +VKT N I GDI
Sbjct: 6 VIDIFSGCGGLALGFQKA----GFKITHGIELMPEAVKTVSYNIDWRFGEETSHICGDIT 61
Query: 58 KIKTQDIPDH-----DVLLAGFPCQPFSQAG 83
++ T + +++ G PCQ +S AG
Sbjct: 62 QMDTSIFKERIGKDGCIVIGGPPCQAYSLAG 92
>gi|325675056|ref|ZP_08154742.1| DNA (cytosine-5-)-methyltransferase [Rhodococcus equi ATCC 33707]
gi|325554017|gb|EGD23693.1| DNA (cytosine-5-)-methyltransferase [Rhodococcus equi ATCC 33707]
Length = 398
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ LF GIGG+ L L E EI+P + + + F + GD+ ++++
Sbjct: 17 NMVGLFAGIGGVELGL----RSHGWETELLCEIDPGAQQVLRTRFAGVELHGDVTRLRSL 72
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+++ AGFPCQ SQAG
Sbjct: 73 -PQRTELVAAGFPCQDLSQAG 92
>gi|238759658|ref|ZP_04620818.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236]
gi|238702086|gb|EEP94643.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236]
Length = 369
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 10/86 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K DLFCG GG+ L + +I Y+ N T I D+ +
Sbjct: 25 IKAVDLFCGAGGLTHGL----IKSGINVVAGYDIEESCRFAYEHNNNATFINQDVTSLSG 80
Query: 62 QD------IPDHDVLLAGFPCQPFSQ 81
+ D+ +L PCQPFS
Sbjct: 81 DEVLRHLKNADYTLLAGCAPCQPFST 106
>gi|219848287|ref|YP_002462720.1| DNA-cytosine methyltransferase [Chloroflexus aggregans DSM 9485]
gi|219542546|gb|ACL24284.1| DNA-cytosine methyltransferase [Chloroflexus aggregans DSM 9485]
Length = 362
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 13/88 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF G GG+ + + E +P + + + L DI I
Sbjct: 8 TMIDLFAGCGGVTTGF----KAKGFNVLAAVEFDPVTAQTYHLNHPEVALYVQDIRDISP 63
Query: 62 QDI--------PDHDVLLAGFPCQPFSQ 81
++ VL PCQPFS+
Sbjct: 64 NEMMARCRLERGHLTVLSVCAPCQPFSK 91
>gi|114675316|ref|XP_001163475.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase (EC
2.1.1.37) - human isoform 3 [Pan troglodytes]
Length = 1036
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 559 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 615
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 616 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 650
>gi|313768404|ref|YP_004062084.1| hypothetical protein MpV1_201c [Micromonas sp. RCC1109 virus MpV1]
gi|312599100|gb|ADQ91124.1| hypothetical protein MpV1_201c [Micromonas sp. RCC1109 virus MpV1]
Length = 351
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 27/109 (24%)
Query: 2 LKITDLFCGIGGIRLDLEQT------------------------FNHRNVECFFSSEINP 37
K+ LF G+ G+ L + F ++I
Sbjct: 3 YKVLSLFSGLAGLDLGFSERVIVHRDSVDEEFVESEAPTKDFVHLKQLPFTTVFQNDILK 62
Query: 38 YSVKT-YQANFPNTLIFGDIAKI--KTQDIPDHDVLLAGFPCQPFSQAG 83
+ + + + + DI ++ + + P+ DV+ GFPCQ FS +G
Sbjct: 63 SAKEIAEWNGWAHNYVLKDIKELLDENYEFPEADVVTGGFPCQDFSHSG 111
>gi|68249848|ref|YP_248960.1| modification methylase Bsp6I-like [Haemophilus influenzae
86-028NP]
gi|68058047|gb|AAX88300.1| modification methylase Bsp6I-like [Haemophilus influenzae
86-028NP]
Length = 387
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--- 57
M + GI + + + + + SEI P+ ++PN GD+
Sbjct: 1 MFTYGSICSGIEAVSVAWKGLS-----KPLWFSEIEPFPCAVLAYHYPNIPNLGDMTTLP 55
Query: 58 -KIKTQDIPDHDVLLAGFPCQPFSQAG 83
KI ++IP DVL+ G PCQ FS AG
Sbjct: 56 EKILNREIPAPDVLVGGTPCQAFSVAG 82
>gi|213969524|ref|ZP_03397660.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
T1]
gi|301385979|ref|ZP_07234397.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
Max13]
gi|302059871|ref|ZP_07251412.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
K40]
gi|302131547|ref|ZP_07257537.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213925620|gb|EEB59179.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
T1]
Length = 406
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIK 60
+ F G GG+ + C ++++++ + + DI +K
Sbjct: 12 FNFFEFFAG-GGMA----RAGLGDEWNCLYANDMDHIKAATYINNWGGSHFDERDIHDVK 66
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
T+D+ + D+ A FPCQ S AG
Sbjct: 67 TEDLKSNSDLAWASFPCQDLSVAG 90
>gi|83944557|ref|ZP_00957008.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. EE-36]
gi|83844594|gb|EAP82480.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. EE-36]
Length = 373
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIK 60
+ + F G G +R C F+++++P + + + L+ DIA +
Sbjct: 1 MTFYEFFAGGGMVR-----AGLGVRWRCLFANDVSPKKARIYRRNWGGDALVLADIAALT 55
Query: 61 TQDIPD-HDVLLAGFPCQPFSQAG 83
+ ++PD D++ FPCQ S AG
Sbjct: 56 SAELPDVPDLVWGSFPCQDLSVAG 79
>gi|300957407|ref|ZP_07169621.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 175-1]
gi|300315842|gb|EFJ65626.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 175-1]
Length = 343
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
+K DLFCG GG+ L+Q+ ++ +I ++ N I DI
Sbjct: 3 IKAVDLFCGAGGLTHGLKQS----GIDVVAGYDIEETCRFAFEFNNNAVFINQDITVLKG 58
Query: 58 --KIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D +L PCQPFS G
Sbjct: 59 EQILSHFKDSDVTILAGCAPCQPFSTYG 86
>gi|330891417|gb|EGH24078.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. mori
str. 301020]
Length = 201
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 5/84 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKI 59
+ ++ G GG L LE E EI P + T + + D+ +
Sbjct: 10 LFTSLEMCAGAGGQALGLEMAG--FGHEVL--VEIEPPACATLRLNRPDWNVQEQDLRQF 65
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D++ G PC PFS+AG
Sbjct: 66 NGLPYFGVDLVAGGVPCPPFSKAG 89
>gi|167571686|ref|ZP_02364560.1| C-5 cytosine-specific DNA methylase [Burkholderia oklahomensis
C6786]
Length = 382
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKI 59
M + F G GG+ + + EC F+++ + ++ + L D+A +
Sbjct: 1 MYSFYEFFAG-GGMA----RAGLGSDWECQFANDFDSKKAISYAANWGDDHLNSDDVAAL 55
Query: 60 KTQDIP-DHDVLLAGFPCQPFSQAG 83
T D+P D+ A FPCQ S AG
Sbjct: 56 STADLPGHVDLAWASFPCQDLSLAG 80
>gi|291557370|emb|CBL34487.1| Site-specific DNA methylase [Eubacterium siraeum V10Sc8a]
Length = 361
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GIG L + + ++SEI + + +FP+ + GDI K+
Sbjct: 4 IKLGSLFDGIGVFPL----AASRCGIRPAWASEIEKAPISITKRHFPDMVHLGDITKVDG 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
IP V+ G PCQ S G
Sbjct: 60 GKIPPVHVITFGSPCQNLSLIG 81
>gi|228471277|ref|ZP_04056083.1| modification methylase HgiDII [Porphyromonas uenonis 60-3]
gi|228306919|gb|EEK16017.1| modification methylase HgiDII [Porphyromonas uenonis 60-3]
Length = 351
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLFCGIGG+ L + ++ +++ Y+ N I+ DI + ++
Sbjct: 5 VVDLFCGIGGLSYGLREA----GLQILAGYDLDQTCAFAYERNNNAQFIYKDIRLVSGKE 60
Query: 64 ------IPDHDVLLAGFPCQPFS 80
D VL PCQPFS
Sbjct: 61 VSTLLAETDVKVLAGCAPCQPFS 83
>gi|214010196|ref|NP_445806.3| DNA (cytosine-5)-methyltransferase 1 [Rattus norvegicus]
gi|149020535|gb|EDL78340.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_b [Rattus
norvegicus]
Length = 1621
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F + +
Sbjct: 1143 LRTLDVFSGCGGLTEGFHQAGIS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1199
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1200 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1234
>gi|149020534|gb|EDL78339.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Rattus
norvegicus]
Length = 1503
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F + +
Sbjct: 1025 LRTLDVFSGCGGLTEGFHQAGIS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1081
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1082 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1116
>gi|149020536|gb|EDL78341.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_c [Rattus
norvegicus]
Length = 1634
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F + +
Sbjct: 1156 LRTLDVFSGCGGLTEGFHQAGIS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1212
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1213 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1247
>gi|20137608|sp|Q9Z330|DNMT1_RAT RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=DNA MTase RnoIP; Short=M.RnoIP; AltName:
Full=DNA methyltransferase I; AltName: Full=MCMT
Length = 1622
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F + +
Sbjct: 1144 LRTLDVFSGCGGLTEGFHQAGIS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1200
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1201 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1235
>gi|4160670|dbj|BAA37118.1| DNA cytosine 5 methyltransferase [Rattus rattus]
Length = 1622
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F + +
Sbjct: 1144 LRTLDVFSGCGGLTEGFHQAGIS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1200
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1201 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 1235
>gi|111021129|ref|YP_704101.1| DNA (cytosine-5-)-methyltransferase [Rhodococcus jostii RHA1]
gi|110820659|gb|ABG95943.1| probable DNA (cytosine-5-)-methyltransferase [Rhodococcus jostii
RHA1]
Length = 392
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ LF GIGG+ L L EI+P + + F + + D+ K+++
Sbjct: 12 MVGLFAGIGGLELGL----REHGWNTELLCEIDPGAQAVLRTQFTDVPVHSDVTKLRSL- 66
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
D +++ AGFPCQ SQAG
Sbjct: 67 PRDIELVAAGFPCQDLSQAG 86
>gi|212693075|ref|ZP_03301203.1| hypothetical protein BACDOR_02582 [Bacteroides dorei DSM 17855]
gi|212664361|gb|EEB24933.1| hypothetical protein BACDOR_02582 [Bacteroides dorei DSM 17855]
Length = 436
Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 32/130 (24%), Gaps = 52/130 (40%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK-------------------- 41
K DLF G GG+ + E E++ Y+
Sbjct: 7 YKFIDLFAGAGGLSEGFIRA----GFEPIAHIEMDHYACDTLKTRAAYHYLKANNKLSIY 62
Query: 42 --------------TYQANFPNTLIFGDIAKIKT--------------QDIPDHDVLLAG 73
P +I I + D+++ G
Sbjct: 63 EQYLRTKKEKTDGAWLWNQVPKEVIDTVIQEAIGKETIDGIFKKVDRLCKGQKVDIIIGG 122
Query: 74 FPCQPFSQAG 83
PCQ +S AG
Sbjct: 123 PPCQAYSIAG 132
>gi|326955261|gb|AEA28956.1| C-5 cytosine-specific DNA methylase [Pseudonocardia dioxanivorans
CB1190]
Length = 595
Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFS-SEINPYSVKTYQANFPNTLIFGDIAKIK 60
+ +TDLFCG GG E + V+ + + + DIA+
Sbjct: 1 MTVTDLFCGAGGSSSGAE---SVPGVKVRMACNHWDKAIETHNFNMPHADHDIADIAETD 57
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
+ P D+L A C +SQA
Sbjct: 58 PRRYPHTDLLWASPSCTFWSQA 79
>gi|315583643|pdb|3PT6|A Chain A, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With
Dna
gi|315583644|pdb|3PT6|B Chain B, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With
Dna
Length = 954
Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 494 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 550
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 551 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 585
>gi|115386470|ref|XP_001209776.1| predicted protein [Aspergillus terreus NIH2624]
gi|114190774|gb|EAU32474.1| predicted protein [Aspergillus terreus NIH2624]
Length = 597
Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
+ D FCG GG+ + H ++ +++ ++++TY NFP T +
Sbjct: 292 YTLGDAFCGAGGVSCGARKAGLHNE----WAVDVSQHALETYGLNFPTTDCWQADVNSFL 347
Query: 61 --TQDIPDHDVLLAGFPCQPFSQA 82
D DVL PCQPFS A
Sbjct: 348 SLNHDYLKVDVLHGSPPCQPFSPA 371
>gi|328766176|gb|EGF76234.1| hypothetical protein BATDEDRAFT_28720 [Batrachochytrium
dendrobatidis JAM81]
Length = 373
Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 27/107 (25%)
Query: 2 LKITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINP 37
L + LF G GG+ L LE +S+++
Sbjct: 14 LTVLGLFSGCGGLDLGLELAGLAAAIGEEKALEAFKNKEKFDAIRGESIFHTIYSNDLFK 73
Query: 38 YSVKTYQANFPNTLIFG-DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++Y+ NFP+T DI KIK + P+ D++L GFPC FS+AG
Sbjct: 74 EANESYKLNFPSTFQHELDIRKIK--EFPNADLVLGGFPCPGFSEAG 118
>gi|311896967|dbj|BAJ29375.1| putative DNA methyltransferase [Kitasatospora setae KM-6054]
Length = 676
Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---------LIFGD 55
DLF G GG+ L L + + + + +++T+ ANFP +
Sbjct: 57 LDLFSGAGGLSLGLTRA----GWTLAAAVDHSGPALETHAANFPGMSLDVDLGEPAALEE 112
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + D++ G PCQPFS+AG
Sbjct: 113 LLTLLQPAAGRIDLVAGGPPCQPFSRAG 140
>gi|157953822|ref|YP_001498713.1| hypothetical protein AR158_C632R [Paramecium bursaria Chlorella
virus AR158]
gi|156068470|gb|ABU44177.1| hypothetical protein AR158_C632R [Paramecium bursaria Chlorella
virus AR158]
Length = 348
Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L+ DLF GIGGI L + VE E N + + P +F D+
Sbjct: 2 VLRALDLFSGIGGITHGLREI-----VEPIAFVEKNDEARSFLKKKHPEIPVFDDVCSFD 56
Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83
D++LAG+PC FS AG
Sbjct: 57 ATKWIDKVDIILAGWPCTGFSNAG 80
>gi|315650253|ref|ZP_07903326.1| modification methylase BbvI [Eubacterium saburreum DSM 3986]
gi|315487498|gb|EFU77807.1| modification methylase BbvI [Eubacterium saburreum DSM 3986]
Length = 349
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQT-FNHRNVECF--FSSEINPYSVKTYQANFPNT----LIF 53
+ ++ +LFCG GGI N+ N ++++ + + KTY+ N +
Sbjct: 2 IFRLGELFCGPGGIGWGAINASINNPNYRIIHQWANDYDESTCKTYRYNICPNAPETVYH 61
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI + D L GFPC +S G
Sbjct: 62 ADIRTFDMSQLAPIDALAFGFPCNDYSVVG 91
>gi|220923821|ref|YP_002499123.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS
2060]
gi|219948428|gb|ACL58820.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS
2060]
Length = 358
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIK 60
+++ DLFCG GG+ L + S +I+P + + + + DI+ +
Sbjct: 1 MRLIDLFCGCGGLSLGARNA----GFKVVSSVDIDPILTSSYQRNFRGSRPLIADISSLT 56
Query: 61 TQD-----IPDHDVLLAGFPCQPFSQAG 83
+ D ++ G PCQ FS+AG
Sbjct: 57 RSELLRHAGGHVDGVVGGPPCQGFSEAG 84
>gi|210062530|gb|ACJ06270.1| DNA-cytosine methyltransferase [Photorhabdus luminescens]
Length = 369
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ + GI + + + SEI + Q ++ GD+ +I T
Sbjct: 1 MRFGSVCSGI----EAASVAWEPLGMSPAWFSEIEKFPSAVLQYHWSYVRNLGDMTEIPT 56
Query: 62 QDIPD----HDVLLAGFPCQPFSQAG 83
+ D+L+ G PCQ FS AG
Sbjct: 57 MITENLADAPDILVGGTPCQAFSIAG 82
>gi|324516189|gb|ADY46452.1| tRNA (cytosine-5-)-methyltransferase [Ascaris suum]
Length = 193
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
L+ +LF GIGG L+++ E + +IN + T+ +I +
Sbjct: 12 LRCLELFSGIGGFHYALKESGTR--FEMLAAFDINDVANAIYKHNFPCTTVHQCNIQALT 69
Query: 61 T--QDIPDHDVLLAGFPCQPFSQAG 83
+ D D+ PCQPF++ G
Sbjct: 70 SEFYDRQCADLWTMSPPCQPFTKKG 94
>gi|300925889|ref|ZP_07141727.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 182-1]
gi|300418041|gb|EFK01352.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 182-1]
Length = 380
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 10/86 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI- 59
++K+ DLFCG GG+ L+ + +I+ Y+ N + + + I
Sbjct: 32 LIKVVDLFCGAGGLTHGLQ----KSGLNVVAGYDIDAACRFAYETNNKSLFVQKSVTDIE 87
Query: 60 -----KTQDIPDHDVLLAGFPCQPFS 80
K + VL PCQPFS
Sbjct: 88 DGELVKYFEGAKVRVLAGCAPCQPFS 113
>gi|330936955|gb|EGH41063.1| HsdRM [Pseudomonas syringae pv. pisi str. 1704B]
Length = 313
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M LF G GG + + + +++I Y+ + Y AN P T +
Sbjct: 1 MPSAVSLFSGCGGSDAGILRA----GFDVLMANDIMHYAREVYLANHPETDYIRG-SVTT 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
++ P ++L+ +PCQ FSQ G
Sbjct: 56 IENFPAAELLVGCYPCQGFSQGG 78
>gi|318604073|emb|CBY25571.1| DNA-cytosine methyltransferase [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 383
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K + F G+G IR L +C ++++I+ + TY AN+ +
Sbjct: 1 MKFAEFFAGVGLIREGLS----SSGWKCVWANDISADKMATYVANYGEEHFHLEDIWKVA 56
Query: 62 QDIPDH-----DVLLAGFPCQPFSQAG 83
+ + A FPC S AG
Sbjct: 57 ANPGAILPEGVFLYTASFPCTDLSVAG 83
>gi|330997448|ref|ZP_08321299.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
gi|329570822|gb|EGG52538.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
Length = 417
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 35/111 (31%), Gaps = 31/111 (27%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI---- 56
+L DLF G GG+ Q+ + + E +T + + D
Sbjct: 6 VLNTLDLFAGCGGLTEGFLQSGH---YHTIGAVEWERAPRETLKHRLQTAWGYNDADNVV 62
Query: 57 ---------AKIKTQDIPDH---------------DVLLAGFPCQPFSQAG 83
I D P + DV++ G PCQ +S AG
Sbjct: 63 VRFDIQRTEELIHGFDDPVYGLHEGLENLVGGRAVDVIIGGPPCQAYSLAG 113
>gi|114675314|ref|XP_001163550.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase (EC
2.1.1.37) - human isoform 5 [Pan troglodytes]
Length = 1280
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 803 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 859
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 860 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 894
>gi|261838928|gb|ACX98693.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter
pylori 52]
Length = 355
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAK-- 58
KI DLFCG GG LE + + + + + + + GDI +
Sbjct: 3 YKILDLFCGAGGFSTGLECLEE---FDALIGLDCDKQALITFENNHKNAIGVCGDITQTE 59
Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83
IK + ++++ G PCQ FS G
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSNKG 89
>gi|6684525|gb|AAF23609.1| DNA (cytosine-5)-methyltransferase [Homo sapiens]
Length = 1280
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 803 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 859
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 860 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 894
>gi|167648711|ref|YP_001686374.1| DNA-cytosine methyltransferase [Caulobacter sp. K31]
gi|167351141|gb|ABZ73876.1| DNA-cytosine methyltransferase [Caulobacter sp. K31]
Length = 375
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAKIK 60
+ F G G RL L + C F+++ +P TY+ N + GD+ KI
Sbjct: 9 FYEFFAGGGMARLGLGEA-----WTCAFANDFDPVKAATYRDNHKDAATHFHEGDVWKIA 63
Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83
D+P D+ A PCQ FS AG
Sbjct: 64 AADLPGQADLAWASSPCQDFSLAG 87
>gi|153008840|ref|YP_001370055.1| DNA-cytosine methyltransferase [Ochrobactrum anthropi ATCC 49188]
gi|151560728|gb|ABS14226.1| DNA-cytosine methyltransferase [Ochrobactrum anthropi ATCC 49188]
Length = 414
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 29/92 (31%), Gaps = 14/92 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+ F G GG F+SE + +TY A + DI ++
Sbjct: 82 YNVISTFAGCGGSSTGYRMA----GFRVLFASEFIEAARETYLANARPGTIVDGRDIRQV 137
Query: 60 KTQD--------IPDHDVLLAGFPCQPFSQAG 83
+ + DV PC FS AG
Sbjct: 138 TADEILAATGLKPGELDVFDGSPPCASFSTAG 169
>gi|198475758|ref|XP_001357145.2| GA10499 [Drosophila pseudoobscura pseudoobscura]
gi|198137946|gb|EAL34212.2| GA10499 [Drosophila pseudoobscura pseudoobscura]
Length = 347
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ +LF GIGG+ + + + ++N + Y + +I +
Sbjct: 3 FRVLELFSGIGGMHYAFKYA--QLDGNIVAAMDVNTVANAVYNFALNCHVKTRNIQSLSE 60
Query: 62 QDIPD--HDVLLAGFPCQPFSQAG 83
+++ +LL PCQP ++ G
Sbjct: 61 KEVSKLGATMLLMSPPCQPHTRQG 84
>gi|195160038|ref|XP_002020883.1| GL16217 [Drosophila persimilis]
gi|194117833|gb|EDW39876.1| GL16217 [Drosophila persimilis]
Length = 347
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ +LF GIGG+ + + + ++N + Y + +I +
Sbjct: 3 FRVLELFSGIGGMHYAFKYA--QLDGNIVAAMDVNTVANAVYNFALNCHVKTRNIQSLSE 60
Query: 62 QDIPD--HDVLLAGFPCQPFSQAG 83
+++ +LL PCQP ++ G
Sbjct: 61 KEVSKLGATMLLMSPPCQPHTRQG 84
>gi|118431236|ref|NP_147563.2| DNA (cytosine-5-)-methyltransferase [Aeropyrum pernix K1]
gi|116062559|dbj|BAA79854.2| DNA (cytosine-5-)-methyltransferase [Aeropyrum pernix K1]
Length = 469
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 29/95 (30%), Gaps = 21/95 (22%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
LF G GG+ L Q+ F++EI + TY N L
Sbjct: 7 ISLFSGAGGLDLGFVQSGR---FRIVFANEILLPAAVTYSRNLGLRLEVCGDEPRVEAQP 63
Query: 65 PDH------------------DVLLAGFPCQPFSQ 81
DV++ G PCQ FS
Sbjct: 64 GTIMACDVAKLDFTGLSGVDADVIIGGPPCQDFSI 98
>gi|159897057|ref|YP_001543304.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus ATCC
23779]
gi|159890096|gb|ABX03176.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus ATCC
23779]
Length = 354
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 10/84 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLFCG+GG+ L + +P Y+ N I I ++ ++
Sbjct: 5 VIDLFCGVGGLTHGL----ILEGFGVLAGIDNDPSCKYAYEQNNRTRFIEKSITEVDGRE 60
Query: 64 ------IPDHDVLLAGFPCQPFSQ 81
H +L+ PCQ FSQ
Sbjct: 61 LNALYPNNQHKILVGCAPCQDFSQ 84
>gi|308183851|ref|YP_003927984.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SJM180]
gi|308059771|gb|ADO01667.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SJM180]
Length = 355
Score = 60.7 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAK-- 58
KI DLFCG GG LE + + + + + + + GDI +
Sbjct: 3 YKILDLFCGAGGFSAGLEYLKE---FDALIGLDCDKQALITFENNHKNAIGVCGDITQTE 59
Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83
I+ + ++++ G PCQ FS G
Sbjct: 60 IKEKVIELAKKLEINMIIGGPPCQGFSNKG 89
>gi|325912423|ref|ZP_08174818.1| modification methylase HhaI [Lactobacillus iners UPII 143-D]
gi|325475765|gb|EGC78936.1| modification methylase HhaI [Lactobacillus iners UPII 143-D]
Length = 314
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 25 RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+C +SSE + Y+ +TY+ NF + DI +I ++IPDHD+L AGFPCQ FS +G
Sbjct: 10 FGAQCVYSSEWDKYAQETYKMNFGDVPEG-DITQIDEKNIPDHDILCAGFPCQAFSISG 67
>gi|311221492|gb|ADP76553.1| DNA methyltransferase [Helicobacter pylori]
Length = 587
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAK-- 58
KI DLFCG GG LE + + + + + + + GDI +
Sbjct: 3 YKILDLFCGAGGFSAGLECLEE---FDALIGLDCDKQALITFENNHKNAIGVCGDITQTE 59
Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83
IK + ++++ G PCQ FS G
Sbjct: 60 IKEKVIKLAKKLEINMIIGGPPCQGFSNKG 89
>gi|15644682|ref|NP_206852.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter
pylori 26695]
gi|2313124|gb|AAD07117.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter
pylori 26695]
Length = 355
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAK-- 58
KI DLFCG GG LE + + + + + + + GDI +
Sbjct: 3 YKILDLFCGAGGFSAGLECLEE---FDALIGLDCDKQALITFENNHKNAIGVCGDITQTE 59
Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83
IK + ++++ G PCQ FS G
Sbjct: 60 IKEKVIKLAKKLEINMIIGGPPCQGFSNKG 89
>gi|150024948|ref|YP_001295774.1| type II modification methyltransferase [Flavobacterium
psychrophilum JIP02/86]
gi|149771489|emb|CAL42958.1| Probable type II modification methyltransferase [Flavobacterium
psychrophilum JIP02/86]
Length = 425
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 38/123 (30%), Gaps = 42/123 (34%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRN--------------------------VECFFSSEIN 36
+ LF G GG+ + E F E F+++I+
Sbjct: 4 NLLSLFSGCGGMDIGFEGGFKIPKATINTDIHKDWIQKEDSTHYYLKETFFETKFANDIS 63
Query: 37 PYSVKTYQANFPNTLIFG--------DIAKIKTQD--------IPDHDVLLAGFPCQPFS 80
++ + F + I I + + +++ GFPCQ FS
Sbjct: 64 EHAKIAWNNYFSTKRGYDLNGTFKVGSIVDIVKEYKNGNTTVFPENVEIVTGGFPCQDFS 123
Query: 81 QAG 83
AG
Sbjct: 124 VAG 126
>gi|297276085|ref|XP_001104704.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta]
Length = 1280
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 803 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 859
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 860 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 894
>gi|295114912|emb|CBL35759.1| Site-specific DNA methylase [butyrate-producing bacterium SM4/1]
Length = 217
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 18/97 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYS-VKTYQANFPNTLIFGDIAK 58
+++ DLFCG GG+ L + + + ++++P + + P+ +I I
Sbjct: 65 IRVVDLFCGCGGMSLGIAEACRALDYRFVPVLGADMDPVALQVYKENFKPHHVISEPIEN 124
Query: 59 IKTQDI---------------PDHDVLLAGFPCQPFS 80
+I + D+L+ G PCQ S
Sbjct: 125 QIDSEIGAEISEAEKSFINLVGEVDILIGGPPCQGNS 161
>gi|330958885|gb|EGH59145.1| cytosine-specific DNA methyltransferase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 458
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
LK + GI ++ +E + +EI P+ ++P T GD+ K
Sbjct: 10 LKYGSVCSGI----EAATAAWHPLGMEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGA 65
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I DVL+ G PCQ FS AG
Sbjct: 66 LVLAGKIEAPDVLVGGTPCQAFSVAG 91
>gi|251789087|ref|YP_003003808.1| DNA-cytosine methyltransferase [Dickeya zeae Ech1591]
gi|247537708|gb|ACT06329.1| DNA-cytosine methyltransferase [Dickeya zeae Ech1591]
Length = 411
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIK 60
+ F G GG+ + + +C F+++++P + D+ ++
Sbjct: 20 FSFYEFFAG-GGMA----RAGLGKQWQCLFANDMDPIKASTYIDNWGDEHFDIRDVREVA 74
Query: 61 TQDIP-DHDVLLAGFPCQPFSQAG 83
++P D+ A FPCQ S AG
Sbjct: 75 PDELPLHADLSWASFPCQDLSLAG 98
>gi|301328257|ref|ZP_07221377.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1]
gi|300845286|gb|EFK73046.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1]
Length = 341
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 1 ML--KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58
M+ K+ DLFCG GG+ L+ ++ ++ Y+ N + I DIAK
Sbjct: 1 MMTVKVIDLFCGAGGLTHGLQLA----GLDVVAGIDLEGECRFPYERNNKSKFIEQDIAK 56
Query: 59 IKTQD------IPDHDVLLAGFPCQPFSQ 81
+ ++ VL PCQPFS+
Sbjct: 57 VTKEELLRLYGDASVKVLAGCAPCQPFSK 85
>gi|209978474|gb|ACJ04671.1| DNA methyltransferase 1 [Carassius auratus]
Length = 1503
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1026 LRTLDVFSGCGGLSEGFHQAGIS---ETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1082
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1083 KLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 1117
>gi|190338613|gb|AAI63894.1| Dnmt1 protein [Danio rerio]
Length = 1500
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1023 LRTLDVFSGCGGLSEGFHQAGIS---ETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1079
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1080 KLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 1114
>gi|190337769|gb|AAI63893.1| Dnmt1 protein [Danio rerio]
Length = 1500
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1023 LRTLDVFSGCGGLSEGFHQAGIS---ETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1079
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1080 KLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 1114
>gi|3818628|gb|AAC69603.1| DNA methyltransferase [Danio rerio]
Length = 700
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 223 LRTLDVFSGCGGLSEGFHQAGIS---ETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 279
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 280 KLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 314
>gi|40538748|ref|NP_571264.1| DNA (cytosine-5)-methyltransferase 1 [Danio rerio]
gi|19263095|gb|AAL86596.1|AF483203_1 DNA (cytosine-5)-methyltransferase [Danio rerio]
Length = 1499
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 1022 LRTLDVFSGCGGLSEGFHQAGIS---ETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 1078
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1079 KLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 1113
>gi|308071385|ref|YP_003872990.1| Modification methylase AquI alpha subunit (cytosine-specific
methyltransferase AquI alpha subunit) [Paenibacillus
polymyxa E681]
gi|305860664|gb|ADM72452.1| Modification methylase AquI alpha subunit (Cytosine-specific
methyltransferase AquI alpha subunit) [Paenibacillus
polymyxa E681]
Length = 366
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 14/93 (15%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M + F G GG+ + L Q + E+ P +T N I
Sbjct: 1 MKNVISFFTGAGGLDIGLNQA----GFTVKLAVELMPIYCETLSLNHAGLNIRQGNIMDY 56
Query: 61 TQD----------IPDHDVLLAGFPCQPFSQAG 83
+++ + ++++ G PCQ FS AG
Sbjct: 57 SREKVYTEAGLEENEEVELMVGGSPCQSFSTAG 89
>gi|251788110|ref|YP_003002831.1| DNA-cytosine methyltransferase [Dickeya zeae Ech1591]
gi|247536731|gb|ACT05352.1| DNA-cytosine methyltransferase [Dickeya zeae Ech1591]
Length = 490
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI- 59
ML+ + GI + + ++ + SE++P+ +P+ GDI +I
Sbjct: 9 MLQYGSVCSGI----EAVSLAWEPLGLQAAWFSEVDPFPNAVLAHRYPHIPNLGDITRIA 64
Query: 60 ---KTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++ D+L+ G PCQ FS AG
Sbjct: 65 DRVQNGEVTAPDILVGGTPCQAFSIAG 91
>gi|134296266|ref|YP_001120001.1| DNA-cytosine methyltransferase [Burkholderia vietnamiensis G4]
gi|134139423|gb|ABO55166.1| DNA-cytosine methyltransferase [Burkholderia vietnamiensis G4]
Length = 384
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 6/83 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-NPYSVKTYQANFPNTLIFGDIAKIK 60
L + F G G + L +++++ + + G I ++
Sbjct: 16 LSYLEFFAGSGLVAEGLRGL-----FRPVWANDLSEKKAATYTANHGARHFHLGSIENVE 70
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+P D+ A FPCQ S AG
Sbjct: 71 GAVLPVADMTWASFPCQDLSLAG 93
>gi|210134246|ref|YP_002300685.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12]
gi|210132214|gb|ACJ07205.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12]
Length = 355
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAK-- 58
KI DLFCG GG LE + + + + + + + GDI +
Sbjct: 3 YKILDLFCGAGGFSAGLECLEE---FDALIGLDCDKQALITFENNHKNAIGVCGDITQAA 59
Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83
IK + ++++ G PCQ FS G
Sbjct: 60 IKEKVIKLAQKLEINMIIGGPPCQGFSNKG 89
>gi|325969823|ref|YP_004246015.1| DNA-cytosine methyltransferase [Vulcanisaeta moutnovskia 768-28]
gi|323709026|gb|ADY02513.1| DNA-cytosine methyltransferase [Vulcanisaeta moutnovskia 768-28]
Length = 329
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
+ DLF G GG + EI+ + +TY NFP+ ++ DI I+
Sbjct: 3 YSVIDLFAGAGGFSRGFLDA----GFDVVLGIEIDINAARTYSYNFPDAVMLVDDIKNIR 58
Query: 61 TQDI-----PDHDVLLAGFPCQPFS 80
+D+ DV++ G PC+ F+
Sbjct: 59 GEDVIKYIGDKPDVVIGGSPCEAFT 83
>gi|257466255|ref|ZP_05630566.1| DNA-cytosine methyltransferase [Fusobacterium gonidiaformans ATCC
25563]
gi|315917413|ref|ZP_07913653.1| DNA-cytosine methyltransferase [Fusobacterium gonidiaformans ATCC
25563]
gi|313691288|gb|EFS28123.1| DNA-cytosine methyltransferase [Fusobacterium gonidiaformans ATCC
25563]
Length = 407
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 37/112 (33%), Gaps = 33/112 (29%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-------------NPYSVKTYQANFP 48
K DLF G GG+ QT + EC S E N Y++ +
Sbjct: 4 YKFIDLFAGCGGLEDGFMQTGD---YECISSVEWLKPQVDTLRHRLKNKYNILDADESVL 60
Query: 49 NTLIFGDIAKIKTQDIPDH-----------------DVLLAGFPCQPFSQAG 83
+ I + ++ D+++ G PCQ +S AG
Sbjct: 61 HFDIQREDELFNGWSNDENFGSSLGLDYYVKKSNGVDLIIGGPPCQAYSIAG 112
>gi|237728463|ref|ZP_04558944.1| DNA-cytosine methyltransferase [Citrobacter sp. 30_2]
gi|226909941|gb|EEH95859.1| DNA-cytosine methyltransferase [Citrobacter sp. 30_2]
Length = 318
Score = 60.7 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
++ G GG L LE + E+ P + T + +I D+ +
Sbjct: 4 FNSLEMCAGAGGQALGLEMA----GFDHAALVELEPAACATLRLNRPAWNVIEDDLRRFD 59
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ D++ G PC PFS+AG
Sbjct: 60 GRPYQGIDLVAGGVPCPPFSKAG 82
>gi|332359910|gb|EGJ37724.1| C-5 cytosine-specific DNA methylase superfamily protein
[Streptococcus sanguinis SK1056]
Length = 516
Score = 60.7 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 33/107 (30%), Gaps = 28/107 (26%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----------- 49
M DLFCG GG + Q + FSS+ +P +TY
Sbjct: 1 MPYAIDLFCGAGGFSEGILQA----GFDIIFSSDKSPMVEETYTNRHKQLGLVEGVDTHF 56
Query: 50 -------------TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + DV+ G PCQ FS+ G
Sbjct: 57 ELADIKELTSDKIFQSINSLKYGNIFERGTIDVIFGGPPCQGFSRLG 103
>gi|319639602|ref|ZP_07994349.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
gi|317399173|gb|EFV79847.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
Length = 327
Score = 60.7 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYSVKTYQANFPNTLIFG 54
LK+ LFCG GG L L F + E ++ + + ++V+TY ANF + I
Sbjct: 5 LKVVSLFCGCGGSDLGLLGGFEYLGQTYPKLPFEIVYALDFDKFAVQTYNANFEHPAICD 64
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
DI + Q++ D D+LL GFPCQ FS
Sbjct: 65 DIKNLNIQELDDFDLLLGGFPCQSFST 91
>gi|49117032|gb|AAH72774.1| Dnmt1 protein [Xenopus laevis]
Length = 1490
Score = 60.7 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F + I
Sbjct: 1014 LRTLDVFSGCGGLSEGFHQAGIS---ETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNILL 1070
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1071 KLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFS 1105
>gi|148225023|ref|NP_001084021.1| DNA (cytosine-5-)-methyltransferase 1 [Xenopus laevis]
gi|1731732|dbj|BAA11458.1| DNA (cytosine-5-)-methyltransferase [Xenopus laevis]
Length = 1490
Score = 60.7 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F + I
Sbjct: 1014 LRTLDVFSGCGGLSEGFHQAGIS---ETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNILL 1070
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1071 KLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFS 1105
>gi|293417389|ref|ZP_06660013.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185]
gi|291430909|gb|EFF03905.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185]
Length = 345
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ DLFCG GG+ L+Q ++ +I Y++N I DI+ +
Sbjct: 4 KVVDLFCGAGGLTHGLKQA----GLDVVAGIDIESACRVAYESNNSALFIEKDISLVTKD 59
Query: 63 DIP------DHDVLLAGFPCQPFSQ 81
++ VL PCQPFS+
Sbjct: 60 ELNDLFEGAQVRVLAGCAPCQPFSR 84
>gi|306821027|ref|ZP_07454646.1| possible DNA (cytosine-5-)-methyltransferase [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|304550968|gb|EFM38940.1| possible DNA (cytosine-5-)-methyltransferase [Eubacterium yurii
subsp. margaretiae ATCC 43715]
Length = 317
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ +LF GIG +R L + + EI+ VK+Y A + DI K
Sbjct: 10 NVLELFGGIGALRKALIR--QKIPHKVVDYVEIDKNCVKSYNALYNADFTPKDIVKYHAP 67
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+L+ G PCQ FS+ G
Sbjct: 68 N-ERVDLLMHGSPCQDFSRIG 87
>gi|312890850|ref|ZP_07750379.1| DNA-cytosine methyltransferase [Mucilaginibacter paludis DSM
18603]
gi|311296633|gb|EFQ73773.1| DNA-cytosine methyltransferase [Mucilaginibacter paludis DSM
18603]
Length = 336
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKI 59
+ ++ G GG + L+Q E E+ + +T +I D+
Sbjct: 13 IYTSIEICAGAGGQAIGLDQA----GFEHLALVELENLACQTLRFNKPQWNVIEKDVRNF 68
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D+ G PC PFS AG
Sbjct: 69 SATKYEGVDLFAGGVPCPPFSIAG 92
>gi|304387865|ref|ZP_07370039.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC
13091]
gi|254670653|emb|CBA06706.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis
alpha153]
gi|254672637|emb|CBA06420.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis
alpha275]
gi|261392815|emb|CAX50396.1| putative type II restriction-modification system enzyme Mod
[Neisseria meningitidis 8013]
gi|304338130|gb|EFM04266.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC
13091]
gi|319410190|emb|CBY90526.1| putative type II restriction-modification system enzyme Mod
[Neisseria meningitidis WUE 2594]
gi|325134031|gb|EGC56686.1| DNA-cytosine methyltransferase [Neisseria meningitidis M13399]
gi|325203903|gb|ADY99356.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240355]
Length = 411
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+++ +F GIG + + + N F+ +I+PY K+Y DI +
Sbjct: 38 IRLATVFSGIGAVEQAFHRL--NLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDITQF 95
Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83
+ + D+L+ G PCQ FS G
Sbjct: 96 DARKFRNQVDILVGGSPCQAFSMVG 120
>gi|22091184|ref|NP_665998.1| M.PhiCh1-II [Natrialba phage PhiCh1]
gi|289594296|ref|YP_003482303.1| DNA-cytosine methyltransferase [Natrialba magadii ATCC 43099]
gi|22003505|gb|AAM88754.1|AF440695_80 putative C5-cytosine methyltransferase [Natrialba phage PhiCh1]
gi|289533393|gb|ADD07741.1| DNA-cytosine methyltransferase [Natrialba magadii ATCC 43099]
Length = 283
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 23/100 (23%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----------VKTYQANFPNTL 51
LF GIGG L + + + E N + + Y + P L
Sbjct: 30 THVSLFSGIGGFDLGFSRA----GFKNLVAVEANQDAADTYRANLINDCENYGQDEPPVL 85
Query: 52 IFGDIAKIKTQDI--------PDHDVLLAGFPCQPFSQAG 83
+ DI K+ T +I + G PCQ FS G
Sbjct: 86 MERDITKVATWEILEAAGIGVGQLTAVSGGPPCQGFSHIG 125
>gi|121634611|ref|YP_974856.1| putative modification methylase [Neisseria meningitidis FAM18]
gi|4887086|gb|AAD32180.1|AF125564_2 putative site specific DNA methyltransferase [Neisseria
meningitidis]
gi|120866317|emb|CAM10058.1| putative modification methylase [Neisseria meningitidis FAM18]
gi|325132026|gb|EGC54724.1| DNA-cytosine methyltransferase [Neisseria meningitidis M6190]
gi|325135954|gb|EGC58564.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579]
gi|325137780|gb|EGC60355.1| DNA-cytosine methyltransferase [Neisseria meningitidis ES14902]
gi|325142075|gb|EGC64502.1| DNA-cytosine methyltransferase [Neisseria meningitidis 961-5945]
gi|325198036|gb|ADY93492.1| DNA-cytosine methyltransferase [Neisseria meningitidis G2136]
gi|325202381|gb|ADY97835.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149]
gi|325207867|gb|ADZ03319.1| DNA-cytosine methyltransferase [Neisseria meningitidis NZ-05/33]
Length = 411
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+++ +F GIG + + + N F+ +I+PY K+Y DI +
Sbjct: 38 IRLATVFSGIGAVEQAFHRL--NLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDITQF 95
Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83
+ + D+L+ G PCQ FS G
Sbjct: 96 DARKFRNQVDILVGGSPCQAFSMVG 120
>gi|307193684|gb|EFN76367.1| DNA (cytosine-5)-methyltransferase 1 [Harpegnathos saltator]
Length = 1460
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ D+F G GG+ L + E ++ E + ++ N+PN +F
Sbjct: 936 LRTLDIFAGCGGLSDGLHEAGVA---ETLWAIEKEETAAYAFRLNYPNATVFSTDCNTLL 992
Query: 62 QDIPDHD----------------VLLAGFPCQPFS 80
+ + D +L G PCQ FS
Sbjct: 993 RKVMKGDRIDENGQKYPQKGEVELLCGGPPCQGFS 1027
>gi|319428134|gb|ADV56208.1| DNA-cytosine methyltransferase [Shewanella putrefaciens 200]
Length = 305
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI 59
M++ DLF G GG + V +++ N +V ++ N P D+ +
Sbjct: 1 MVRGIDLFAGAGGTTSGAKMA----GVRMVWAANHNRTAVDYHEINHPEVKHAHQDLQQA 56
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+PDHD++ A CQ S+A
Sbjct: 57 NWALVPDHDIVFASPCCQGHSRA 79
>gi|121582558|ref|YP_974087.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42]
gi|120608614|gb|ABM44352.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42]
Length = 318
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
++ G GG L LE + E+ P + T + +I D+ +
Sbjct: 4 FNSLEMCAGAGGQALGLEMA----GFDHAALVELEPAACATLRLNRPAWNVIEDDLRRFD 59
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ D++ G PC PFS+AG
Sbjct: 60 GRPYQGIDLVAGGVPCPPFSKAG 82
>gi|156937913|ref|YP_001435709.1| DNA-cytosine methyltransferase [Ignicoccus hospitalis KIN4/I]
gi|156566897|gb|ABU82302.1| DNA-cytosine methyltransferase [Ignicoccus hospitalis KIN4/I]
Length = 315
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 9/84 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFGDIAK 58
DLF G GG L E E + + Y+ +A + +K
Sbjct: 5 FFDLFSGAGGFALGFEMA----GFEGVLGVDNDKAPARSYAANHPKALTLVEDVSKLSSK 60
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQA 82
+ + D DV++ PC+P++ A
Sbjct: 61 TIERLVGDVDVVIGSPPCEPYTAA 84
>gi|299820316|gb|ADJ54326.1| C5-cytosine specific methylase [archaeon enrichment culture clone
1(2010)]
Length = 396
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK+ DL+ G+GG+ L + + EIN +V TY N +
Sbjct: 4 LKVLDLYSGLGGLSLGVAIALRP---KEIIGLEINKNAVDTYNLNLSRYNAKAFRQDVLQ 60
Query: 62 QDI-PDHDVLLAGFPCQPFSQA 82
+D+++ G PC+PFS A
Sbjct: 61 WQPEGHYDLIIGGSPCEPFSIA 82
>gi|291535263|emb|CBL08375.1| DNA-methyltransferase (dcm) [Roseburia intestinalis M50/1]
Length = 350
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQT-FNHRNVECF--FSSEINPYSVKTY----QANFPNTLIFG 54
++ +LFCG GGI + + ++++ + + +TY + P T+
Sbjct: 3 YRLGELFCGPGGIAWGATHADIGNSDYSIVHQWANDYDASTCETYRRNICPDAPQTVYHE 62
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI K + D L GFPC +S G
Sbjct: 63 DIRKFDMSKLAPIDALAFGFPCNDYSVVG 91
>gi|320458138|dbj|BAJ68759.1| DNA methylase [Bifidobacterium longum subsp. infantis ATCC 15697]
Length = 349
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 10/86 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+ DLFCG GG+ L L+Q V + Y+ N + + ++
Sbjct: 1 MISAIDLFCGTGGLSLGLKQG----GVRVVAGIDNAASCAYPYEENIKAKFVRKSVREVT 56
Query: 61 TQDIPDHD------VLLAGFPCQPFS 80
++ +L PCQPFS
Sbjct: 57 GDELKRLWGRSSVRLLAGCAPCQPFS 82
>gi|193783730|dbj|BAG53712.1| unnamed protein product [Homo sapiens]
Length = 540
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 63 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 119
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 120 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 154
>gi|67514595|ref|NP_001020002.1| tRNA (cytosine-5-)-methyltransferase [Gallus gallus]
gi|66766328|dbj|BAD99025.1| DNA methyltransferase 2 [Gallus gallus]
Length = 398
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI- 59
L++ +L+ GIGG+ L+++ E + ++N + + Y+ NFP+T I I
Sbjct: 4 LRVLELYSGIGGMHQALKESCICA--EVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGIT 61
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83
K D D++L PCQPF++ G
Sbjct: 62 LKEFDRLSFDMILMSPPCQPFTRIG 86
>gi|315583650|pdb|3PTA|A Chain A, Crystal Structure Of Human Dnmt1(646-1600) In Complex With
Dna
Length = 956
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q + ++ E +P + N +T+ D +
Sbjct: 495 LRTLDVFSGCGGLSEGFHQAGIS---DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILL 551
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 552 KLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFS 586
>gi|301609669|ref|XP_002934384.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Xenopus (Silurana)
tropicalis]
Length = 1492
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F + +
Sbjct: 1016 LRTLDVFSGCGGLSEGFHQAGIS---ETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1072
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1073 KLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFS 1107
>gi|182765469|ref|NP_001116832.1| hypothetical protein LOC100036795 [Xenopus laevis]
gi|171846414|gb|AAI61682.1| LOC100036795 protein [Xenopus laevis]
Length = 1492
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F + +
Sbjct: 1016 LRTLDVFSGCGGLSEGFHQAGIS---ETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1072
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 1073 KLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFS 1107
>gi|317483226|ref|ZP_07942221.1| C-5 cytosine-specific DNA methylase [Bifidobacterium sp.
12_1_47BFAA]
gi|316915295|gb|EFV36722.1| C-5 cytosine-specific DNA methylase [Bifidobacterium sp.
12_1_47BFAA]
Length = 349
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 10/86 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+ DLFCG GG+ L L+Q V + Y+ N + + ++
Sbjct: 1 MISAIDLFCGTGGLSLGLKQG----GVRVVAGIDNAASCAYPYEENIKAKFVRESVREVT 56
Query: 61 TQDIPDHD------VLLAGFPCQPFS 80
++ +L PCQPFS
Sbjct: 57 GDELKRLWGRSSVRLLAGCAPCQPFS 82
>gi|320094594|ref|ZP_08026360.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. oral taxon 178
str. F0338]
gi|319978509|gb|EFW10086.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. oral taxon 178
str. F0338]
Length = 365
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------ 56
+I LF G GG+ L +Q + + +++P +++T++ NF +T+
Sbjct: 36 RIVSLFSGAGGLDLGFQQAGFPLSF----AVDLSPAAIETHRRNFQDTVAVEADLTELGS 91
Query: 57 -----AKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ + ++ G PCQ FS+A
Sbjct: 92 DGVLEHLAPILEPGESIGVIGGPPCQGFSRA 122
>gi|186472257|ref|YP_001859599.1| DNA-cytosine methyltransferase [Burkholderia phymatum STM815]
gi|184194589|gb|ACC72553.1| DNA-cytosine methyltransferase [Burkholderia phymatum STM815]
Length = 356
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 28/90 (31%), Gaps = 13/90 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIKT 61
+ F G GG L + + E N + L GDIA +
Sbjct: 24 TVVSTFAGCGGSSLGYSMA----GFDERLAVEWNEKQAASFVANFPHVPLHLGDIADLSD 79
Query: 62 QD--------IPDHDVLLAGFPCQPFSQAG 83
D + DV PCQ FS AG
Sbjct: 80 ADALRMARLEPGELDVFDGSPPCQGFSLAG 109
>gi|315169253|gb|EFU13270.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX1341]
Length = 521
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 32/107 (29%), Gaps = 28/107 (26%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M DLFCG GG + Q FSS+ +P +TY + +
Sbjct: 1 MPYAIDLFCGAGGFSEGIIQA----GFNIVFSSDKSPMVEETYTNRHKQLGLVEGVDTHF 56
Query: 61 T------------------------QDIPDHDVLLAGFPCQPFSQAG 83
+ D + G PCQ FS+ G
Sbjct: 57 ELADIKDLTTELIFKSINNLKYGNIFEPGSIDAIFGGPPCQGFSRLG 103
>gi|47220040|emb|CAG12188.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1209
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+ D+F G GG+ Q E ++ E+ + + ++ N P +F + I
Sbjct: 783 YRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWEPAAQAFRLNNPGATVFTEDCNILL 839
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 840 KLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 874
>gi|127441|sp|P25265|MTD2_HERAU RecName: Full=Modification methylase HgiDII; Short=M.HgiDII;
AltName: Full=Cytosine-specific methyltransferase
HgiDII
gi|48773|emb|CAA38941.1| methyltransferase [Herpetosiphon aurantiacus]
Length = 354
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 10/84 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLFCG+GG+ L + +P Y+ N I I+++ ++
Sbjct: 5 VIDLFCGVGGLTHGL----ILEGFGVLAGIDNDPSCKYAYEQNNRTRFIEKSISEVDGRE 60
Query: 64 ------IPDHDVLLAGFPCQPFSQ 81
H +L+ PCQ FSQ
Sbjct: 61 LNALYPNNQHKILVGCAPCQDFSQ 84
>gi|326573696|gb|EGE23654.1| DNA-cytosine methyltransferase [Moraxella catarrhalis O35E]
Length = 408
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+++ +F GIG I L++ + N F+++I+ + K+Y DI
Sbjct: 34 IRLATVFSGIGAIEQALKRL--NLNHSIVFANDIDNFVKKSYLANYELDEKNWHSDITTF 91
Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83
+ D+L+ G PCQ FS G
Sbjct: 92 DATPYKNQVDILVGGSPCQAFSMVG 116
>gi|256421593|ref|YP_003122246.1| DNA-cytosine methyltransferase [Chitinophaga pinensis DSM 2588]
gi|256036501|gb|ACU60045.1| DNA-cytosine methyltransferase [Chitinophaga pinensis DSM 2588]
Length = 423
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 30/127 (23%), Gaps = 49/127 (38%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---------- 51
LK DLF G GG+ + E EI + T +
Sbjct: 6 LKYIDLFAGAGGLSEGFIRA----GFEPVAHVEIEEAACFTLKTRTAYHYLKNKGEYDTY 61
Query: 52 ---------------------IFGDIAKIKTQDIP--------------DHDVLLAGFPC 76
+ I + D+++ G PC
Sbjct: 62 VSYLKGEISRAELYKAVPSELMDAIINLPIGAEHNSAIHKAIEKQLLGSKVDLIIGGPPC 121
Query: 77 QPFSQAG 83
Q +S G
Sbjct: 122 QAYSVVG 128
>gi|14330659|emb|CAC41108.1| site-specific DNA-methyltransferase (cytosine-specific)
[Klebsiella pneumoniae]
Length = 375
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 11/87 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + FCG GG+ L L+Q + + +IN +V+TY N N D + +
Sbjct: 10 LTCIEGFCGAGGMSLGLKQA----GFDVRLAFDINENAVETYNKNIGNHCEKLDASIVSG 65
Query: 62 QD-------IPDHDVLLAGFPCQPFSQ 81
+ D+ G PCQ FS+
Sbjct: 66 KFLLEKAGIKTRLDLFSGGPPCQGFSK 92
>gi|161869767|ref|YP_001598934.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis 053442]
gi|161595320|gb|ABX72980.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis 053442]
Length = 411
Score = 60.0 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+++ +F GIG + + + N F+ +I+PY K+Y DI +
Sbjct: 38 IRLATVFSGIGAVEQAFHRL--NLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDITQF 95
Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83
+ D+L+ G PCQ FS G
Sbjct: 96 DASKFRNQVDILVGGSPCQAFSMVG 120
>gi|218767941|ref|YP_002342453.1| putative modification methylase [Neisseria meningitidis Z2491]
gi|6900408|emb|CAB72018.1| putative cytosine-specific methyltransferase [Neisseria
meningitidis]
gi|121051949|emb|CAM08255.1| putative modification methylase [Neisseria meningitidis Z2491]
Length = 411
Score = 60.0 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+++ +F GIG + + + N F+ +I+PY K+Y DI +
Sbjct: 38 IRLATVFSGIGAVEQAFHRL--NLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDITQF 95
Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83
+ D+L+ G PCQ FS G
Sbjct: 96 DASKFRNQVDILVGGSPCQAFSMVG 120
>gi|296114006|ref|YP_003627944.1| DNA-cytosine methyltransferase [Moraxella catarrhalis RH4]
gi|295921700|gb|ADG62051.1| DNA-cytosine methyltransferase [Moraxella catarrhalis RH4]
Length = 410
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+++ +F GIG I L++ + N F+++I+ + K+Y DI
Sbjct: 36 IRLATVFSGIGAIEQALKRL--NLNHSIVFANDIDNFVKKSYLANYELDEKNWHSDITTF 93
Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83
+ DVL+ G PCQ FS G
Sbjct: 94 DATPYKNQVDVLVGGSPCQAFSMVG 118
>gi|322691196|ref|YP_004220766.1| phage protein [Bifidobacterium longum subsp. longum JCM 1217]
gi|320456052|dbj|BAJ66674.1| hypothetical phage protein [Bifidobacterium longum subsp. longum
JCM 1217]
Length = 509
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
K LF G G+ + + + E S+I P + + P GDI KI
Sbjct: 6 YKTISLFSGYLGLDIGVSKAIGE--GELVGWSDIEPGPLALGSHHAPKARRLGDITKIDW 63
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ D +V+ GF CQ S AG
Sbjct: 64 EKYKDIEVMAGGFCCQSLSLAG 85
>gi|294678263|ref|YP_003578878.1| cytosine-specific DNA-methyltransferase [Rhodobacter capsulatus SB
1003]
gi|294477083|gb|ADE86471.1| site-specific DNA-methyltransferase (cytosine-specific)
[Rhodobacter capsulatus SB 1003]
Length = 316
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 26/85 (30%), Gaps = 8/85 (9%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS------VKTYQANFPNTLIFGDIAK 58
L G GG+ L L E ++ + +
Sbjct: 23 LSLCSGAGGLDLGLTIAI--PGYRAVGHVERETFAAATLVARMEDASLDRAPVWDDVATF 80
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
D++ AG+PCQPFS AG
Sbjct: 81 DGRPWRGAVDIVTAGYPCQPFSVAG 105
>gi|320009547|gb|ADW04397.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC
33331]
Length = 431
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF------GD 55
L++ ++ G GG L LE+ E + E++P + +T + N P +
Sbjct: 4 LQVAEICAGAGGQALGLERA----GFEHAVAVELDPTAAQTLKRNMPGCDVRTGDVADRS 59
Query: 56 IAK--IKTQDIPDHDVLLAGFPCQPFSQAG 83
I + D++ G PC PF+ AG
Sbjct: 60 IWDPEQFCAEHGTPDLIAGGVPCPPFTIAG 89
>gi|167042310|gb|ABZ07039.1| putative C-5 cytosine-specific DNA methylase [uncultured marine
crenarchaeote HF4000_ANIW97J3]
Length = 380
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 4 ITDLFCGIGGIRLDLEQTF-NHRNVECFFSSEINPYSVKTYQANFPNTLI---------- 52
+ DLF G GG+ + +++ + ++ TY+ N P
Sbjct: 7 VLDLFSGPGGLSEGFNTAKIGNHTFRSVVANDNDVHASVTYRKNHPGVEFVLGDISASEI 66
Query: 53 FGDIAKIKTQDIPDH--DVLLAGFPCQPFSQ 81
I + + + DV++ G PC+ FS
Sbjct: 67 KRKIVRAIKAETGMNTVDVIIGGPPCKGFSL 97
>gi|302876801|ref|YP_003845434.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|307687484|ref|ZP_07629930.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|302579658|gb|ADL53670.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
Length = 406
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 32/111 (28%), Gaps = 32/111 (28%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---------I 52
KI DLF G GG+ Q+ E + E V T +
Sbjct: 4 YKIIDLFAGCGGLEDGFLQSGQ---YEDVAAVEWLKPQVNTLVNRLKTKWGIVDADERVM 60
Query: 53 FGDIAK--------------------IKTQDIPDHDVLLAGFPCQPFSQAG 83
DI + D+++ G PCQ +S AG
Sbjct: 61 HFDIQREEELFGGWEDEEFGTNRGLDYFVNKANGIDIIIGGPPCQAYSVAG 111
>gi|38640332|ref|NP_944253.1| Bcep22gp25 [Burkholderia phage Bcep22]
gi|33860399|gb|AAQ54959.1| Bcep22gp25 [Burkholderia phage Bcep22]
Length = 205
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
++ + GI ++ + + +EI + ++P+ GD+ KI
Sbjct: 1 MRYGSVCSGI----EAATVAWHPLGWKPAWFAEIEKFPSAVLAHHYPDVPNLGDMTKITR 56
Query: 61 ---TQDIPDHDVLLAGFPCQPFSQAG 83
+++ DVL+ G PCQ FS AG
Sbjct: 57 AVLAREVEVPDVLVGGTPCQAFSLAG 82
>gi|326921696|ref|XP_003207092.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Meleagris
gallopavo]
Length = 398
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI- 59
L++ +L+ GIGG+ L+++ E + ++N + + Y+ NFP+T I I
Sbjct: 4 LRVLELYSGIGGMHQALKESCVCA--EVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGIT 61
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83
K D D++L PCQPF++ G
Sbjct: 62 LKEFDRLSFDMILMSPPCQPFTRIG 86
>gi|302187943|ref|ZP_07264616.1| C-5 cytosine-specific DNA methylase family protein [Pseudomonas
syringae pv. syringae 642]
Length = 307
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59
M DLF G+GG + V+ +++ P +V+ + AN P+ + D+ +
Sbjct: 1 MHTAIDLFAGLGGWSSGARRA----GVKVLWAANHWPVAVEWHSANHPDAIHVCQDLHQA 56
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+P HD++LA CQ S+A
Sbjct: 57 DWSTVPAHDIMLASPCCQGHSKA 79
>gi|254787981|ref|YP_003075410.1| DNA-methyltransferase [Teredinibacter turnerae T7901]
gi|237687098|gb|ACR14362.1| DNA-methyltransferase [Teredinibacter turnerae T7901]
Length = 380
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 27/101 (26%), Gaps = 24/101 (23%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-----NPYSVKTYQANFPNTLIFGDIA 57
K+ F G G + E+ E F +EI + Y I
Sbjct: 5 KVFSFFSGSGFLDFGFEKA----GFEIVFVNEIFKPFLDAYKYTRNNKIPEFGYSDTCIE 60
Query: 58 KIKTQD---------------IPDHDVLLAGFPCQPFSQAG 83
I + H + G PC FS AG
Sbjct: 61 SILESEDVIETLKSNLRKCKRNGFHTGFIGGPPCPDFSNAG 101
>gi|108562472|ref|YP_626788.1| cytosine specific DNA methyltransferase [Helicobacter pylori
HPAG1]
gi|107836245|gb|ABF84114.1| cytosine specific DNA methyltransferase [Helicobacter pylori
HPAG1]
Length = 355
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAK-- 58
KI DLFCG GG LE+ + + + + + + + GDI +
Sbjct: 3 YKILDLFCGAGGFSAGLERLEE---FDALIGLDCDKQALITFENNHKNAIGVCGDITQTE 59
Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83
IK + ++++ G PCQ FS G
Sbjct: 60 IKEKVIKLAKKLEINMIIGGPPCQGFSNKG 89
>gi|323949009|gb|EGB44903.1| DNA adenine methylase [Escherichia coli H252]
Length = 762
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
L+ + GI + + + +EI P+ +P+ GD+ K
Sbjct: 7 LRYGSVCSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLAHRWPHVANLGDMTKLAK 62
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +I DVL+ G PCQ FS AG
Sbjct: 63 KVLAGEIESPDVLVGGTPCQAFSIAG 88
>gi|302380785|ref|ZP_07269249.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna
ACS-171-V-Col3]
gi|302311385|gb|EFK93402.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna
ACS-171-V-Col3]
Length = 321
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y A + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNALYGENYKPKSVVGYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 NEKI-DLIMHGSPCQDFSRIG 82
>gi|212526390|ref|XP_002143352.1| C-5 cytosine methyltransferase DmtA [Penicillium marneffei ATCC
18224]
gi|210072750|gb|EEA26837.1| C-5 cytosine methyltransferase DmtA [Penicillium marneffei ATCC
18224]
Length = 604
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
D FCG GG+ + + + + +I+ + +T++ NF ++ F
Sbjct: 298 YSFGDAFCGAGGVSVGAWKA----GLRVKYGIDIDTAACETWRTNFVHSSCFHADFYSWL 353
Query: 61 --TQDIPDHDVLLAGFPCQPFSQA 82
+ D+ + PCQPFS A
Sbjct: 354 SLQDEDAQVDISHSSPPCQPFSPA 377
>gi|145207311|gb|AAI14323.2| TRNA aspartic acid methyltransferase 1 [Danio rerio]
Length = 381
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---IFGDIAK 58
L++ +L+ GIGG+ L+++ E + ++N + Y+ NFP T +
Sbjct: 7 LRVFELYSGIGGMHYALKESLVPA--EVVAAVDVNTTANLIYKHNFPTTQLLPKTIEGMT 64
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
++ D + D++L PCQPF++ G
Sbjct: 65 LQDFDRLNFDMILMSPPCQPFTRIG 89
>gi|89941477|ref|NP_001018153.1| tRNA (cytosine-5-)-methyltransferase [Danio rerio]
gi|62433271|dbj|BAD95483.1| DNA methyltransferase [Danio rerio]
Length = 381
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---IFGDIAK 58
L++ +L+ GIGG+ L+++ E + ++N + Y+ NFP T +
Sbjct: 7 LRVFELYSGIGGMHYALKESLVPA--EVVAAVDVNTTANLIYKHNFPTTQLLPKTIEGMT 64
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
++ D + D++L PCQPF++ G
Sbjct: 65 LQDFDRLNFDMILMSPPCQPFTRIG 89
>gi|70734372|ref|YP_260119.1| DNA-cytosine methyltransferase [Pseudomonas fluorescens Pf-5]
gi|68348671|gb|AAY96277.1| DNA-cytosine methyltransferase [Pseudomonas fluorescens Pf-5]
Length = 394
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIK 60
L+ + F G G + + +C F+++++ + Q + DI ++
Sbjct: 5 LRFFEFFAGGG-----MARAGLGNQWQCLFANDMDRIKASTYIQNWGKDHFDSRDIREVN 59
Query: 61 TQDIPDH-DVLLAGFPCQPFSQAG 83
++D+ + D+ A FPCQ S AG
Sbjct: 60 SEDLERNGDLAWASFPCQDLSVAG 83
>gi|113478056|ref|YP_724117.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
gi|110169104|gb|ABG53644.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
Length = 345
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 10/86 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLFCG GG+ E+ NV +I+P Y+ N I + I++
Sbjct: 4 ISAIDLFCGAGGLTHGFEKAGLPVNV----GYDIDPVCKFPYEYNNKAKFILKSVEDIES 59
Query: 62 QD------IPDHDVLLAGFPCQPFSQ 81
+ I VL PCQPFS
Sbjct: 60 MELAKHFPICHLKVLAGCSPCQPFSN 85
>gi|168036438|ref|XP_001770714.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678075|gb|EDQ64538.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--I 59
+++ + + GIGG+R L++ + +IN + Y+ NF + +I + +
Sbjct: 8 MRVLEFYSGIGGLRYSLQEAGVEA--VVVEAFDINEVANDVYEHNFGHRPSQRNIQRLTV 65
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D D + PCQP+++ G
Sbjct: 66 SQLDAYKADTWIMSPPCQPYTRQG 89
>gi|325846341|ref|ZP_08169331.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481605|gb|EGC84644.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 315
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y A + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNALYGEDYKPKSVVGYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 NEKI-DLIMHGSPCQDFSRIG 82
>gi|256544753|ref|ZP_05472125.1| type II restriction-modification system methylation subunit
[Anaerococcus vaginalis ATCC 51170]
gi|256399642|gb|EEU13247.1| type II restriction-modification system methylation subunit
[Anaerococcus vaginalis ATCC 51170]
Length = 320
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y A + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNALYGEDYKPKSVVGYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 NEKI-DLIMHGSPCQDFSRIG 82
>gi|315222611|ref|ZP_07864500.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus
F0211]
gi|315188297|gb|EFU22023.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus
F0211]
Length = 317
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + +LF GIG I+ L + + EI+ VK+Y A + I
Sbjct: 6 LNVLELFGGIGAIKKALIR--QKIPHKTLDYVEIDKNCVKSYNALYNTDFKPKSILDFHP 63
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D D+L+ G PCQ FS++G
Sbjct: 64 PD-KRIDLLMHGSPCQDFSRSG 84
>gi|253571497|ref|ZP_04848903.1| DNA-cytosine methyltransferase [Bacteroides sp. 1_1_6]
gi|251838705|gb|EES66790.1| DNA-cytosine methyltransferase [Bacteroides sp. 1_1_6]
Length = 436
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 34/130 (26%), Gaps = 52/130 (40%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK-------------------- 41
+ DLF G GG+ + E E++ Y+
Sbjct: 3 YRFIDLFAGAGGLSEGFIRA----GYEPIAHIEMDHYACDSLKTRAAFHYLKENGKLEIY 58
Query: 42 --------------TYQANFPNTLIFGDI--------------AKIKTQDIPDHDVLLAG 73
P ++I I K + D+++ G
Sbjct: 59 EEYLKNKKEKTDGSWLWNQVPKSVIDSVIQEAIGKETLPSLFERVDKLCNGKPVDMIIGG 118
Query: 74 FPCQPFSQAG 83
PCQ +S AG
Sbjct: 119 PPCQAYSVAG 128
>gi|328913308|gb|AEB64904.1| putative DNA (Cytosine-5-)-methyltransferase [Bacillus
amyloliquefaciens LL3]
Length = 254
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K +LF GIGGI L E +E E P+ K NFP IF D +
Sbjct: 1 MKSIELFAGIGGIALAAEWA----GIETVAFCEREPFCQKVLNKNFPGVPIFDDACAVNR 56
Query: 62 Q---------DIPDHDVLLAGFPCQPFSQAG 83
Q +L G+PCQ S G
Sbjct: 57 QLLEEKGVIEPGGTISILSGGYPCQGESVIG 87
>gi|307067513|ref|YP_003876479.1| site-specific DNA methylase [Streptococcus pneumoniae AP200]
gi|306409050|gb|ADM84477.1| Site-specific DNA methylase [Streptococcus pneumoniae AP200]
Length = 321
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y A + + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNALYGEDYKAKSVVRYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 NEKI-DLIMHGSPCQDFSRIG 82
>gi|269941524|emb|CBI49922.1| phage C-5 cytosine-specific DNA methylase [Staphylococcus aureus
subsp. aureus TW20]
Length = 332
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAK 58
M+K+ +LF G+G + L E SE + + + D+
Sbjct: 1 MIKVLELFSGVGSFSISLNTLGIE--HEIVGFSETRKTATQLFCKLHNKKESENLGDVRN 58
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +D+ D D+L+ G PCQ F++AG
Sbjct: 59 VSAKDL-DVDLLVFGSPCQSFTRAG 82
>gi|283549178|ref|NP_001164522.1| DNA methyltransferase 1a [Apis mellifera]
Length = 1366
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
LK D+F G GG+ L Q E ++ E + Y+ N PN +F + +
Sbjct: 895 LKTLDVFAGCGGLSEGLHQAGVA---ENLWAIEKEESAAYAYRLNNPNATVFIEDCNVLL 951
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K ++L G PCQ FS
Sbjct: 952 KKVMNGETTNEIGQKLPQKGQVELLCGGPPCQGFS 986
>gi|229492462|ref|ZP_04386265.1| DNA-cytosine methyltransferase [Rhodococcus erythropolis SK121]
gi|229320448|gb|EEN86266.1| DNA-cytosine methyltransferase [Rhodococcus erythropolis SK121]
Length = 387
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ LF GIGG+ L L EI+P + ++ F + + GD+ K++
Sbjct: 7 MVGLFAGIGGLELGLS----EHGWNTELLCEIDPGAQAVLRSRFADVPLHGDVTKLRAL- 61
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
D +++ AGFPCQ SQAG
Sbjct: 62 PSDIELVAAGFPCQDLSQAG 81
>gi|226303815|ref|YP_002763773.1| modification methylase [Rhodococcus erythropolis PR4]
gi|226182930|dbj|BAH31034.1| putative modification methylase [Rhodococcus erythropolis PR4]
Length = 392
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ LF GIGG+ L L EI+P + ++ F + + GD+ K++
Sbjct: 12 MVGLFAGIGGLELGLS----EHGWNTELLCEIDPGAQAVLRSRFADVPLHGDVTKLRAL- 66
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
D +++ AGFPCQ SQAG
Sbjct: 67 PSDIELVAAGFPCQDLSQAG 86
>gi|332885826|gb|EGK06072.1| hypothetical protein HMPREF9456_02336 [Dysgonomonas mossii DSM
22836]
Length = 346
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 31/90 (34%), Gaps = 14/90 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
K D FCG GG+ L +E + + + +TY+ N +
Sbjct: 5 YKAIDFFCGGGGMTCGLRLA----GIEVVAGVDFDKDAKETYEYNNIGSKFIYSDVTQLP 60
Query: 57 -----AKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ DH +L+ PCQ +S
Sbjct: 61 SDYFEKHLNINKNDDHLILVGCSPCQYYSI 90
>gi|296163057|ref|ZP_06845831.1| C-5 cytosine-specific DNA methylase [Burkholderia sp. Ch1-1]
gi|295886701|gb|EFG66545.1| C-5 cytosine-specific DNA methylase [Burkholderia sp. Ch1-1]
Length = 304
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
++ DLF G GG ++ P + + + N P T D+ +
Sbjct: 1 MRAIDLFSGAGGFTEGAVMA----GCSVVWAGNHWPLACEYHARNHPETEHACQDLQQAD 56
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
+ +P HD++LA CQ S A
Sbjct: 57 WRTVPTHDLMLAAPACQGHSPA 78
>gi|260806879|ref|XP_002598311.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae]
gi|229283583|gb|EEN54323.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae]
Length = 1275
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L++ D+F G GG+ Q + ++ E+ + + Y+ N P+ +F D I
Sbjct: 799 LRMLDVFAGCGGLSEGFHQAGIA---DSKWAVEVMEPAAQAYRLNNPDCTVFTDDCNILL 855
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 856 KLVMEGATTNSTGQRLPQKGDVELLCGGPPCQGFS 890
>gi|292657161|ref|YP_003537057.1| site-specific DNA-methyltransferase (cytosine-specific) [Haloferax
volcanii DS2]
gi|291373000|gb|ADE05226.1| site-specific DNA-methyltransferase (cytosine-specific) [Haloferax
volcanii DS2]
Length = 406
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 36/104 (34%), Gaps = 30/104 (28%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-------------- 49
+ DLFCG GG L Q + +IN +++TY+ N +
Sbjct: 6 VVDLFCGAGGASLGFVQA----GYTVAGAVDINDEALETYKRNLCDADLDEYPGEVTFDS 61
Query: 50 ------------TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ F I + + DV+ PCQ FS+
Sbjct: 62 PLKGNLNANKGGHVTFEYIRNEFGLEPGEVDVIAGCPPCQNFSK 105
>gi|327284227|ref|XP_003226840.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Anolis
carolinensis]
Length = 1553
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L+ D+F G GG+ Q E ++ E+ + + ++ N P T +F + +
Sbjct: 1076 LRSLDVFSGCGGLSEGFHQAEVS---ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLL 1132
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1133 KLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFS 1167
>gi|300867524|ref|ZP_07112175.1| putative Modification methylase HgiDII [Oscillatoria sp. PCC 6506]
gi|300334518|emb|CBN57345.1| putative Modification methylase HgiDII [Oscillatoria sp. PCC 6506]
Length = 361
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59
+L DLFCG GG+ L + N+ + + NP KTY+ N PN DIA +
Sbjct: 18 LLTAVDLFCGCGGVTEGLT----NHNIRVVAAVDNNPIVCKTYKINHPNVNLYESDIALL 73
Query: 60 KTQDIPDH-------DVLLAGFPCQPFS 80
DI + D+L+ PCQPFS
Sbjct: 74 DPMDIRQNDLKGADVDILVVCAPCQPFS 101
>gi|195867543|ref|ZP_03079546.1| type II restriction-modification system methylation subunit
[Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|195867960|ref|ZP_03079957.1| type II restriction-modification system methylation subunit
[Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|195660356|gb|EDX53616.1| type II restriction-modification system methylation subunit
[Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|195660787|gb|EDX54041.1| type II restriction-modification system methylation subunit
[Ureaplasma urealyticum serovar 9 str. ATCC 33175]
Length = 323
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y A + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNALYEENYKPKSVLGYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 NEKI-DLIMHGSPCQDFSRIG 82
>gi|323138162|ref|ZP_08073235.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242]
gi|322396624|gb|EFX99152.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242]
Length = 381
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ F G G + + C F+++ + + + GD+ +I T
Sbjct: 7 FYEFFAGGG-----MARAGLGPGWACLFANDFDRKKAESYRANWGGGEMHVGDVREITTA 61
Query: 63 DIP-DHDVLLAGFPCQPFSQAG 83
+P D++ A FPCQ S AG
Sbjct: 62 QLPGRADLVWASFPCQDLSLAG 83
>gi|212695555|ref|ZP_03303683.1| hypothetical protein ANHYDRO_00072 [Anaerococcus hydrogenalis DSM
7454]
gi|212677433|gb|EEB37040.1| hypothetical protein ANHYDRO_00072 [Anaerococcus hydrogenalis DSM
7454]
Length = 321
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y A + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNALYGENYKPKSVVGYKIP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 NEKI-DLIMHGSPCQDFSRIG 82
>gi|325478388|gb|EGC81503.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 321
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNELYGEDYKAKSVVGYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 NEKI-DLIMHGSPCQDFSRIG 82
>gi|148555450|ref|YP_001263032.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1]
gi|148500640|gb|ABQ68894.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1]
Length = 400
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 30/92 (32%), Gaps = 18/92 (19%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV------KTYQANFPNTLIFGDIAK 58
F G GG+ L E + + EIN + F + GD++
Sbjct: 75 VSFFTGCGGMDLGFE----SVGYQHVAAFEINELFCKTLRRNRPEWKVFGPPVHSGDVSM 130
Query: 59 IKT--------QDIPDHDVLLAGFPCQPFSQA 82
+ P V G PCQPFS A
Sbjct: 131 FENVAAALRTVIKAPFEGVFAGGPPCQPFSIA 162
>gi|313890914|ref|ZP_07824537.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus
SPIN 20026]
gi|313120711|gb|EFR43827.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus
SPIN 20026]
Length = 316
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y A + + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNALYGESYKPKSVVGYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 NEKI-DLIMHGSPCQDFSRIG 82
>gi|290957787|ref|YP_003488969.1| restriction/modification system DNA methylase [Streptomyces
scabiei 87.22]
gi|260647313|emb|CBG70418.1| putative restriction/modification system DNA methylase
[Streptomyces scabiei 87.22]
Length = 424
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ I DLF G GG L E + ++ KT A T+
Sbjct: 1 MTILDLFAGPGGWSHSLHVLGVRD-----VGLEWDEWACKTRAAAGQLTIRTDVALYPVW 55
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ L+A PCQ +S AG
Sbjct: 56 PFLGKTVGLIASPPCQAWSMAG 77
>gi|169824652|ref|YP_001692263.1| cytosine-specific DNA-methyltransferase [Finegoldia magna ATCC
29328]
gi|297588631|ref|ZP_06947274.1| type II restriction-modification system methylation subunit
[Finegoldia magna ATCC 53516]
gi|304440076|ref|ZP_07399968.1| type II restriction-modification system methylation subunit
[Peptoniphilus duerdenii ATCC BAA-1640]
gi|167831457|dbj|BAG08373.1| cytosine-specific DNA-methyltransferase [Finegoldia magna ATCC
29328]
gi|297574004|gb|EFH92725.1| type II restriction-modification system methylation subunit
[Finegoldia magna ATCC 53516]
gi|304371443|gb|EFM25057.1| type II restriction-modification system methylation subunit
[Peptoniphilus duerdenii ATCC BAA-1640]
Length = 320
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR + E EI+ VK+Y A + + K
Sbjct: 5 KILELFGGIGAIRKAFINL--KISYEVVDYVEIDKACVKSYNALYGEAYKPKSVVGYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 NEKI-DLIMHGSPCQDFSRIG 82
>gi|217032842|ref|ZP_03438321.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128]
gi|298737011|ref|YP_003729541.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945425|gb|EEC24089.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128]
gi|298356205|emb|CBI67077.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 361
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAK-- 58
KI DLFCG GG LE+ + + + + + + + GDI +
Sbjct: 3 YKILDLFCGAGGFSAGLERLEE---FDALIGLDCDKQALITFENNHKNAIGVCGDITQAA 59
Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83
IK ++++ G PCQ FS G
Sbjct: 60 IKEKVIKLAQTLGINMIIGGPPCQGFSNKG 89
>gi|213968059|ref|ZP_03396204.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
T1]
gi|213927039|gb|EEB60589.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
T1]
Length = 584
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
LK + GI ++ +E + +EI+P+ ++P T GD+ K
Sbjct: 10 LKYGSVCSGI----EAATAAWHPLGMEPVWFAEIDPFPSAVLAHHYPRTPNLGDMTKLGA 65
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I DVL+ G PCQ FS AG
Sbjct: 66 LVLAGKIDAPDVLVGGTPCQAFSVAG 91
>gi|189500352|ref|YP_001959822.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides BS1]
gi|189495793|gb|ACE04341.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides BS1]
Length = 420
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 30/127 (23%), Gaps = 49/127 (38%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK DLF G GG+ + E E + + T Q + +
Sbjct: 5 LKFLDLFAGAGGLSEGFIRA----GFEPVAHVESDQAACFTLQTRIGYHWLNERRRIEQY 60
Query: 62 QDI---------------------------------------------PDHDVLLAGFPC 76
+ D+++ G PC
Sbjct: 61 AEYLKGAISREAFYEYVPRQVIDSVINAEISAITLPYIFRRVDALLGNHSLDLIVGGPPC 120
Query: 77 QPFSQAG 83
Q +S G
Sbjct: 121 QAYSVIG 127
>gi|255020360|ref|ZP_05292428.1| DNA-cytosine methyltransferase [Acidithiobacillus caldus ATCC
51756]
gi|254970280|gb|EET27774.1| DNA-cytosine methyltransferase [Acidithiobacillus caldus ATCC
51756]
Length = 449
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 31/106 (29%), Gaps = 28/106 (26%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN----------------PYSVKTYQA 45
L DLF G GG+ L L++ F+ E + PY+
Sbjct: 9 LSCIDLFAGCGGLSLGLKEA----GWSGLFAIERDPMAFETLSQNFLVPGAPYASFADWP 64
Query: 46 NFPNTLIFG--------DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + K ++ G PCQ FS G
Sbjct: 65 AWLPKTNHDIVALLKNESVRKHLRSLRGAVTMIAGGPPCQGFSVGG 110
>gi|262200381|ref|YP_003271589.1| C-5 cytosine-specific DNA methylase [Gordonia bronchialis DSM
43247]
gi|262083728|gb|ACY19696.1| C-5 cytosine-specific DNA methylase [Gordonia bronchialis DSM
43247]
Length = 372
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 28/81 (34%), Gaps = 7/81 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLF G GG+ + E++ ++ T A +
Sbjct: 19 TVIDLFAGPGGLDVAAHWLGL-----PVVGVELDADAIATRHAAGLKSHHRSVQRCTPAD 73
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+L AG PCQ F+ AG
Sbjct: 74 F--RATILTAGPPCQTFTVAG 92
>gi|319939117|ref|ZP_08013481.1| modification methylase BsuRI [Streptococcus anginosus 1_2_62CV]
gi|319812167|gb|EFW08433.1| modification methylase BsuRI [Streptococcus anginosus 1_2_62CV]
Length = 434
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 24/106 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTF------------------------NHRNVECFFSSEINP 37
+ + LF G GG+ L E + +++++
Sbjct: 63 INVVSLFSGAGGLDLGTELAGLASVVGLQKALEIFEDKKEFSKKRHKSIFHTIYTNDMFV 122
Query: 38 YSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +TY+ NFP +I K P++++ + GFPC FS+AG
Sbjct: 123 EANETYKKNFPPNIIQHQKDIRKVAHFPNNELTVGGFPCPGFSEAG 168
>gi|227500535|ref|ZP_03930589.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus
tetradius ATCC 35098]
gi|227217363|gb|EEI82692.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus
tetradius ATCC 35098]
Length = 321
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y A + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNALYGEDYKSKSVVGYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 NEKI-DLIMHGSPCQDFSRIG 82
>gi|254804563|ref|YP_003082784.1| putative type II DNA modification methylase [Neisseria
meningitidis alpha14]
gi|254668105|emb|CBA04653.1| putative type II DNA modification methylase [Neisseria
meningitidis alpha14]
Length = 450
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 8/85 (9%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK-- 60
+ + GI + + E + SEI + + +P+ GD+ I
Sbjct: 6 TVGSVCSGI----EAASIAWQNLGFEFKWFSEILKFPSDILRNKYPHIDNLGDMNYIPEL 61
Query: 61 --TQDIPDHDVLLAGFPCQPFSQAG 83
I D++ G PCQ FS AG
Sbjct: 62 LKHNSISSPDLICGGTPCQAFSLAG 86
>gi|17225496|gb|AAL37432.1|AF328909_1 putative cytosine-specific DNA methyltransferase [Helicobacter
pylori]
gi|17225522|gb|AAL37451.1|AF328916_1 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 361
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAK-- 58
KI DLFCG GG L + + + + + + + + GDI +
Sbjct: 3 YKILDLFCGAGGFSAGL---GYLKEFDALIGLDCDKQALITFENNHKNAIGVCGDITQTE 59
Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83
I+ + ++++ G PCQ FS G
Sbjct: 60 IKEKVIELAKKLEINMIIGGPPCQGFSNKG 89
>gi|320180750|gb|EFW55676.1| DNA-cytosine methyltransferase [Shigella boydii ATCC 9905]
Length = 340
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ DLFCG GG+ L+ ++ ++ Y+ N + I DIAK+ +
Sbjct: 4 KVIDLFCGAGGLTHGLQLA----GLDVVAGIDLEGECRFPYERNNKSKFIEQDIAKVTKE 59
Query: 63 D------IPDHDVLLAGFPCQPFSQ 81
+ VL PCQPFS+
Sbjct: 60 ELLRLYGDASVKVLAGCAPCQPFSK 84
>gi|156552675|ref|XP_001599223.1| PREDICTED: similar to DNA cytosine-5 methyltransferase 3B2 [Nasonia
vitripennis]
Length = 1093
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GIG + L+ + N+EC+++SEI+P S++ N N +I +I
Sbjct: 824 IRVLSLFDGIGTGLVVLKHL--NVNIECYYASEIDPDSMQVSFFNHGNEIIQLGDVRNID 881
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82
+ K ++I D+L+ G PC S A
Sbjct: 882 EKKIKEIAPIDLLIGGSPCNELSLA 906
>gi|237726505|ref|ZP_04556986.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. D4]
gi|229435031|gb|EEO45108.1| C-5 cytosine-specific DNA methylase [Bacteroides dorei 5_1_36/D4]
Length = 356
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ DLFCGIGG+ + + ++ +++ + Y+ N IF DI ++
Sbjct: 11 IEVVDLFCGIGGLSYGM----KSKGLKIRAGFDLDQTCLYAYETNNEAKFIFKDIRTVRK 66
Query: 62 QDI------PDHDVLLAGFPCQPFS 80
++I VL PCQPFS
Sbjct: 67 EEIIPFYSKKSIKVLAGCAPCQPFS 91
>gi|239622757|ref|ZP_04665788.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239514754|gb|EEQ54621.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 390
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 10/85 (11%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
+ F GIG RL LE+ +S++I+ + Y+ F N + + ++
Sbjct: 19 LEFFAGIGLARLGLEEA----GFHVAWSNDIDHAKCQMYRNQFGNNEQEHTLIEGDMGEL 74
Query: 65 PDHD------VLLAGFPCQPFSQAG 83
D + PC S AG
Sbjct: 75 HGSDLPHDISIAWGSSPCTDISLAG 99
>gi|171184904|ref|YP_001793823.1| DNA-cytosine methyltransferase [Thermoproteus neutrophilus
V24Sta]
gi|170934116|gb|ACB39377.1| DNA-cytosine methyltransferase [Thermoproteus neutrophilus
V24Sta]
Length = 462
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 18/95 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN---------------PYSVKTYQAN 46
+ LF G GG+ L Q+ F++++
Sbjct: 4 YTVVSLFSGAGGLDLGFVQSGR---YRMLFANDVLSSALTTYAKNLDLKLELCSSRRTEA 60
Query: 47 FPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
P + D+A++ + D DV++ G PCQ FS
Sbjct: 61 RPGVALVCDVAEVDFAPLGDVDVIVGGPPCQDFSI 95
>gi|325849320|ref|ZP_08170737.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480182|gb|EGC83251.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 321
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y A + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNALYGEDYKAKSVVGYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 NEKI-DLIMHGSPCQDFSRIG 82
>gi|261820947|ref|YP_003259053.1| DNA-cytosine methyltransferase [Pectobacterium wasabiae WPP163]
gi|261604960|gb|ACX87446.1| DNA-cytosine methyltransferase [Pectobacterium wasabiae WPP163]
Length = 487
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ + GI + + ++ + SEI+P+ +P+ GD+ +I
Sbjct: 10 LQFGSVCSGI----EAVSLAWEPLGMKAAWFSEIDPFPCAVLAHRYPHVPNLGDMTRIAN 65
Query: 62 Q----DIPDHDVLLAGFPCQPFSQAG 83
Q ++ D+L+ G PCQ FS AG
Sbjct: 66 QVRVGEVIAPDILVGGTPCQAFSIAG 91
>gi|307595752|ref|YP_003902069.1| DNA-cytosine methyltransferase [Vulcanisaeta distributa DSM
14429]
gi|307550953|gb|ADN51018.1| DNA-cytosine methyltransferase [Vulcanisaeta distributa DSM
14429]
Length = 321
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 10/85 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIK 60
+ DLF G GG + E++ + +I DI +
Sbjct: 3 YTVVDLFAGAGGFSRGF----KDVGFDVALGVEVDINAARTFSYNFPEAVMITDDIRNVS 58
Query: 61 TQDI-----PDHDVLLAGFPCQPFS 80
+DI DV++ G PC+ F+
Sbjct: 59 GKDIIKYIGGRPDVIIGGSPCEAFT 83
>gi|224539035|ref|ZP_03679574.1| hypothetical protein BACCELL_03935 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519363|gb|EEF88468.1| hypothetical protein BACCELL_03935 [Bacteroides cellulosilyticus
DSM 14838]
Length = 345
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 11/83 (13%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQD 63
DLF G+GG+ L + + + EI+ + Y+ N T I +I + T+
Sbjct: 6 IDLFSGVGGLTQGLRKA----GFQTKMAFEIDELASSVYKLNHKRTKVITDNIRNVSTEK 61
Query: 64 IPDH------DVLLAGFPCQPFS 80
+ +L PCQ FS
Sbjct: 62 VKKQFKGKTIHLLAGCPPCQGFS 84
>gi|308275289|emb|CBX31885.1| hypothetical protein N47_O13040 [uncultured Desulfobacterium sp.]
Length = 423
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 31/127 (24%), Gaps = 49/127 (38%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---------- 51
++ DLF G GG+ + E + + T +
Sbjct: 9 IRFLDLFAGAGGLSEGFIRA----GFTPVAHVEADKAACFTLKTRAAYHWLKNSGRLDRY 64
Query: 52 -----------------IFGDIAKIKTQDI------------------PDHDVLLAGFPC 76
I + +I D+++ G PC
Sbjct: 65 NAYLHGSITRGELYELVPKKQILSVINSEIREDSLAEIFGEIDILLRGEKVDLIIGGPPC 124
Query: 77 QPFSQAG 83
Q +S AG
Sbjct: 125 QAYSLAG 131
>gi|167646223|ref|YP_001683886.1| DNA-cytosine methyltransferase [Caulobacter sp. K31]
gi|167348653|gb|ABZ71388.1| DNA-cytosine methyltransferase [Caulobacter sp. K31]
Length = 387
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN--PYSVKTYQANFPNTLIFGDIAK 58
M + F G GG+ + C F+++ + L GD+ +
Sbjct: 1 MPSFYEFFAG-GGMA----RAGLGDEWTCLFANDFDAKKGMTYQRNWGADGELHIGDVKQ 55
Query: 59 IKTQD-IPDHDVLLAGFPCQPFSQAG 83
+KT+ + D++ FPCQ S AG
Sbjct: 56 VKTKQLRGEPDLVWGSFPCQDLSLAG 81
>gi|325144138|gb|EGC66445.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240013]
gi|325200491|gb|ADY95946.1| DNA-cytosine methyltransferase [Neisseria meningitidis H44/76]
Length = 406
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+++ +F GIG + + + N FS +I+PY K+Y DI +
Sbjct: 33 IRLATVFSGIGAVEQAFHRL--NLNHTIVFSGDIDPYVKKSYLGNYKLNEDFWHNDITQF 90
Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83
+ + D+L+ G PCQ FS G
Sbjct: 91 DARKFRNQVDILVGGSPCQAFSMVG 115
>gi|325127899|gb|EGC50802.1| DNA-cytosine methyltransferase [Neisseria meningitidis N1568]
Length = 411
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+++ +F GIG + + + N FS +I+PY K+Y DI +
Sbjct: 38 IRLATVFSGIGAVEQAFHRL--NLNHTIVFSGDIDPYVKKSYLGNYKLNEDFWHNDITQF 95
Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83
+ + D+L+ G PCQ FS G
Sbjct: 96 DARKFRNQVDILVGGSPCQAFSMVG 120
>gi|256821199|ref|YP_003142398.1| DNA-cytosine methyltransferase [Anaerococcus prevotii DSM 20548]
gi|256799179|gb|ACV29833.1| DNA-cytosine methyltransferase [Anaerococcus prevotii DSM 20548]
Length = 321
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y A + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNALYGEEYKAKSVVGYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 NEKI-DLIMHGSPCQDFSRIG 82
>gi|15676724|ref|NP_273868.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis MC58]
gi|7226061|gb|AAF41239.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis MC58]
gi|308389005|gb|ADO31325.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis
alpha710]
gi|316984499|gb|EFV63467.1| modification methylase HpaII [Neisseria meningitidis H44/76]
gi|325129944|gb|EGC52743.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304]
gi|325140023|gb|EGC62552.1| DNA-cytosine methyltransferase [Neisseria meningitidis CU385]
gi|325206334|gb|ADZ01787.1| DNA-cytosine methyltransferase [Neisseria meningitidis M04-240196]
Length = 411
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+++ +F GIG + + + N FS +I+PY K+Y DI +
Sbjct: 38 IRLATVFSGIGAVEQAFHRL--NLNHTIVFSGDIDPYVKKSYLGNYKLNEDFWHNDITQF 95
Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83
+ + D+L+ G PCQ FS G
Sbjct: 96 DARKFRNQVDILVGGSPCQAFSMVG 120
>gi|2558956|gb|AAC49849.1| Masc1 [Ascobolus immersus]
Length = 537
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
D FCG GG+ L Q +E ++ ++NP + Y+ NFPNT F
Sbjct: 227 YTFGDTFCGGGGVSLGARQA----GLEVKWAFDMNPNAGANYRRNFPNTDFFLAEAEQFI 282
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82
++ D+L PCQ FS+A
Sbjct: 283 QLSVGISQHVDILHLSPPCQTFSRA 307
>gi|153933427|ref|YP_001385281.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. ATCC 19397]
gi|153933974|ref|YP_001384769.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. ATCC 19397]
gi|153935154|ref|YP_001386762.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. Hall]
gi|153935271|ref|YP_001386815.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. Hall]
gi|153937696|ref|YP_001388073.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. Hall]
gi|152929471|gb|ABS34971.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. ATCC 19397]
gi|152930018|gb|ABS35518.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. ATCC 19397]
gi|152931068|gb|ABS36567.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. Hall]
gi|152931185|gb|ABS36684.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. Hall]
gi|152933610|gb|ABS39109.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. Hall]
Length = 315
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M++I +LF GIG R L V+ EI+ +V++Y A F L + + +
Sbjct: 1 MIQILELFGGIGAPRKALINLGVP--VKAIDYVEIDEKAVRSYNAIFHKDLAYKTQSVVG 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
P D+L+ G PCQ FS AG
Sbjct: 59 YNLKP--DILIHGSPCQDFSIAG 79
>gi|148826164|ref|YP_001290917.1| modification methylase [Haemophilus influenzae PittEE]
gi|148716324|gb|ABQ98534.1| modification methylase [Haemophilus influenzae PittEE]
gi|162532590|gb|ABY16693.1| probable methylase [Haemophilus influenzae]
gi|309973308|gb|ADO96509.1| Probable cytosine-specific DNA methyltransferase [Haemophilus
influenzae R2846]
Length = 409
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+++ +F GIG I +++ N E F+ +I+P+ K+Y DI
Sbjct: 35 IRLATVFSGIGAIEQAMKRL--KLNHEIIFAGDIDPHVKKSYLANYQLSEEHWHSDITTF 92
Query: 60 K-TQDIPDHDVLLAGFPCQPFSQAG 83
T D+L+ G PCQ FS G
Sbjct: 93 DATPYREQIDLLVGGSPCQAFSMVG 117
>gi|157953809|ref|YP_001498700.1| hypothetical protein AR158_C619L [Paramecium bursaria Chlorella
virus AR158]
gi|156068457|gb|ABU44164.1| hypothetical protein AR158_C619L [Paramecium bursaria Chlorella
virus AR158]
Length = 363
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K +LF GIGGI L VE E + + + + GDI K
Sbjct: 16 MKALELFAGIGGITHGLRGY-----VEPIAFCEYEKDA--SSFLSQRGLPVHGDITKFDA 68
Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83
+ D++ AG+PC FS AG
Sbjct: 69 SVYKNKIDIVTAGWPCTGFSTAG 91
>gi|317010333|gb|ADU84080.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SouthAfrica7]
Length = 361
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAK-- 58
KI DLFCG GG LE+ + + ++ T++ N N I GDI +
Sbjct: 3 YKILDLFCGAGGFSAGLERLKE---FSALIGLDCDKQALNTFENNHKNAVGICGDITQAG 59
Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83
I+ + ++++ G PCQ FS G
Sbjct: 60 IKEKVIELAKKLEINMIIGGPPCQGFSNKG 89
>gi|332023953|gb|EGI64171.1| DNA (cytosine-5)-methyltransferase PliMCI [Acromyrmex echinatior]
Length = 1449
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ D+F G GG+ + Q E ++ E + Y+ N P T++F +
Sbjct: 942 LRMLDIFAGCGGLSEGMHQAGVA---ESLWAIEKESSAANAYRLNNPKTMVFSEDCNKLL 998
Query: 62 QDIPDHD----------------VLLAGFPCQPFS 80
Q + D D +L G PCQ FS
Sbjct: 999 QRVMDGDRVDNNGQKLPQKGDVELLCGGPPCQGFS 1033
>gi|296170222|ref|ZP_06851815.1| DNA (cytosine-5-)-methyltransferase [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295895098|gb|EFG74816.1| DNA (cytosine-5-)-methyltransferase [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 388
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 9/86 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----IAK 58
K + F GIG R+ LE+ + ++++ P Y F + I K
Sbjct: 13 KAIEFFAGIGLARMGLEKA----GFQVTWANDYEPDKRAMYVGQFGESEGHTFALGDIGK 68
Query: 59 IKTQDIPDHDVL-LAGFPCQPFSQAG 83
+K D+P L A PC S AG
Sbjct: 69 VKAADLPTDAALAWASSPCTDLSLAG 94
>gi|301382137|ref|ZP_07230555.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
Max13]
Length = 320
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
L+ + GI ++ +E + +EI+P+ ++P T GD+ K
Sbjct: 10 LQYGSVCSGI----EAATAAWHPLGMEPVWFAEIDPFPSAVLAHHYPRTPNLGDMTKLGA 65
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I DVL+ G PCQ FS AG
Sbjct: 66 LVLAGKIDAPDVLVGGTPCQAFSVAG 91
>gi|157952985|ref|YP_001497877.1| hypothetical protein NY2A_B681L [Paramecium bursaria Chlorella
virus NY2A]
gi|155123212|gb|ABT15080.1| hypothetical protein NY2A_B681L [Paramecium bursaria Chlorella
virus NY2A]
Length = 350
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK +LF GIGGI L VE E + + + GDI K
Sbjct: 3 LKALELFAGIGGITYGLRGY-----VEPIAFCEYEKDAAAFL--SQRGLPVHGDITKFDA 55
Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83
D++ AG+PC FS AG
Sbjct: 56 SVYKTKIDIVTAGWPCTGFSTAG 78
>gi|331000405|ref|ZP_08324080.1| DNA (cytosine-5-)-methyltransferase [Parasutterella
excrementihominis YIT 11859]
gi|329571737|gb|EGG53417.1| DNA (cytosine-5-)-methyltransferase [Parasutterella
excrementihominis YIT 11859]
Length = 392
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN-HRNVECFFSSEINPYSVKTYQANFPNTLI------FG 54
L + ++F G GGI L L QT + + ++++ + + +TY+ N +
Sbjct: 31 LTVGEMFSGPGGIGLALNQTKRGKLSFKHLWATDYDSDTCETYRKNIFTGIHKEALSICK 90
Query: 55 DIAKIK-TQDIPDHDVLLAGFPCQPFSQAG 83
DI ++ +++P D L GFPC FS G
Sbjct: 91 DIREVDIAKELPQADGFLYGFPCNDFSNVG 120
>gi|260583507|ref|ZP_05851255.1| modification methylase HphIA [Granulicatella elegans ATCC 700633]
gi|260158133|gb|EEW93201.1| modification methylase HphIA [Granulicatella elegans ATCC 700633]
Length = 103
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLF G+GG+ + E ++E++ + + + +I DI+K+
Sbjct: 5 VIDLFFGVGGLSKEF----FDSGFEIVLANEVDYSIANFYKKNHPKVKMINEDISKLDID 60
Query: 63 D----IPDHDVLLAGFPCQPFSQAG 83
D + DV++ G PCQ FSQ G
Sbjct: 61 DVFNEYKNIDVIVWGPPCQGFSQKG 85
>gi|89055380|ref|YP_510831.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
gi|88864929|gb|ABD55806.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
Length = 373
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 29/89 (32%), Gaps = 13/89 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDI---- 56
DLFCG GG+ LE ++ + + I G I
Sbjct: 3 YTAIDLFCGAGGLSAGLEMA----GFTVLAGNDLFDAAGRTFEATHPRAKFISGPIEELS 58
Query: 57 ----AKIKTQDIPDHDVLLAGFPCQPFSQ 81
++ + VL+ G PCQ +S
Sbjct: 59 VERLMEVTGLRKGELSVLVGGPPCQAYSV 87
>gi|213691014|ref|YP_002321600.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213522475|gb|ACJ51222.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320457065|dbj|BAJ67686.1| putative DNA methylase [Bifidobacterium longum subsp. infantis
ATCC 15697]
Length = 390
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 10/85 (11%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
+ F GIG RL LE+ +S++I+ + Y+ F N + + ++
Sbjct: 19 LEFFAGIGLARLGLEEA----GFHVAWSNDIDHAKCQMYRNQFGNNEQEHTLIEGDMGEL 74
Query: 65 PDHD------VLLAGFPCQPFSQAG 83
D + PC S AG
Sbjct: 75 HGSDLPHNISIAWGSSPCTDISLAG 99
>gi|255640237|gb|ACU20409.1| unknown [Glycine max]
Length = 385
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ + + GIGG+R L + N + + EIN + YQ NF + G+I +
Sbjct: 13 RVLEFYSGIGGMRYSLMKA--QVNAQVVQAFEINDTANDVYQHNFGHRPYQGNIQCLTAA 70
Query: 63 --DIPDHDVLLAGFPCQPFSQAG 83
D D L PCQP+++ G
Sbjct: 71 DLDKYGADAWLLSPPCQPYTRQG 93
>gi|108763142|ref|YP_631786.1| DNA-cytosine methyltransferase [Myxococcus xanthus DK 1622]
gi|108467022|gb|ABF92207.1| DNA-cytosine methyltransferase [Myxococcus xanthus DK 1622]
Length = 505
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---------NTLI 52
L++ DLF G GG+ L EI+ ++ +++ NF +
Sbjct: 18 LRLLDLFSGCGGLTLGFVSA----GCVSVGGVEIDAHAAESHALNFHPLKDRSAAPWHAM 73
Query: 53 FGDIAKIKT---------QDIPDHDVLLAGFPCQPFSQAG 83
DI ++K DV++ G PC F++ G
Sbjct: 74 SKDILQLKPSSLNHLLKRPPNEGVDVIVGGPPCPAFTRVG 113
>gi|283456339|ref|YP_003360903.1| cytosine methyl transferase [Bifidobacterium dentium Bd1]
gi|283102973|gb|ADB10079.1| dcm Cytosine methyl transferase [Bifidobacterium dentium Bd1]
Length = 509
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT--- 61
F G GG+ L +EQ E + + N+P+ + GDI ++
Sbjct: 136 LSFFTGAGGLDLGMEQAGISAR----LLCENMREARMSIGVNWPDKALVGDITELDAVTV 191
Query: 62 ------QDIPDHDVLLAGFPCQPFSQAG 83
+ + DV+ G PCQ FS AG
Sbjct: 192 RRMAGLDEDTEIDVMFGGPPCQAFSTAG 219
>gi|83955480|ref|ZP_00964111.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. NAS-14.1]
gi|83840124|gb|EAP79299.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. NAS-14.1]
Length = 384
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ FCG G +R L+ +C +++I+ K Y N+ +
Sbjct: 10 TYAEFFCGGGMVRAALQD-----RWDCVLANDIDAMKCKVYAQNWGQAALHQGDIAAMPD 64
Query: 63 D--IPDHDVLLAGFPCQPFSQAG 83
D D+ A PCQ FS AG
Sbjct: 65 DLLARQIDMYWASSPCQDFSLAG 87
>gi|154173655|ref|YP_001409100.1| cytosine-specific methyltransferase NlaX [Campylobacter curvus
525.92]
gi|112802981|gb|EAU00325.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Campylobacter
curvus 525.92]
Length = 352
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKIKT-QDI 64
F GIG + F + F+ EI+ ++ ++Y +I ++
Sbjct: 12 FSGIGSAEFAAREVFAE--YDMAFACEIDKFARQSYLANHAIDEKHFHCNIKELDAKIYT 69
Query: 65 PDHDVLLAGFPCQPFSQAG 83
DVL+ G PCQ FS AG
Sbjct: 70 DKVDVLIGGSPCQDFSLAG 88
>gi|327274474|ref|XP_003222002.1| PREDICTED: LOW QUALITY PROTEIN: tRNA
(cytosine-5-)-methyltransferase-like [Anolis
carolinensis]
Length = 391
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK-TYQANFPNTLIFGDIAKIK 60
L++ +L+ GIGG+ L+ + E + ++N + + L I I
Sbjct: 4 LRVLELYSGIGGMHYALQASNILA--EIVAAVDVNTVANEVYTHNFCTTPLWPKTIEGIS 61
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
++ +L PCQPF++ G
Sbjct: 62 LKEFNKX--ILMSPPCQPFTRIG 82
>gi|126465817|ref|YP_001040926.1| DNA-cytosine methyltransferase [Staphylothermus marinus F1]
gi|126014640|gb|ABN70018.1| DNA-cytosine methyltransferase [Staphylothermus marinus F1]
Length = 323
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIK 60
K DLFCG GG T + P + + +I DI +I+
Sbjct: 5 YKFIDLFCGAGGFAEGFILTNR---FRSVLGIDNFRPAAQTYKINFPDSIVIMEDIKRIR 61
Query: 61 TQ------DIPDHDVLLAGFPCQPFSQA 82
D + DV++ PC+PF+ A
Sbjct: 62 NDDLIEIIDPEEIDVVIGSPPCEPFTGA 89
>gi|317126940|ref|YP_004093222.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM
2522]
gi|315471888|gb|ADU28491.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM
2522]
Length = 382
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 15/98 (15%)
Query: 1 MLKITDLFCGIGGIRLDLEQTF-------NHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
+ + +LF G GG+ L + ++ +S++ + + KTY N
Sbjct: 2 IFRKGELFNGPGGLALGAKNAGFIHPETGEEWKIQHVWSNDYDSNACKTYGYNICGDEND 61
Query: 54 GDIAKIKTQDIP--------DHDVLLAGFPCQPFSQAG 83
+ +++P D D GFPC +SQ G
Sbjct: 62 ESVHIGPVENLPIGNKDVIGDIDCFAFGFPCNDYSQVG 99
>gi|220926735|ref|YP_002502037.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060]
gi|219951342|gb|ACL61734.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060]
Length = 454
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 33/92 (35%), Gaps = 14/92 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--FPNTLIFGDIAKI 59
+ F G GG F+SE + +TY+AN L DI ++
Sbjct: 90 FNVISTFAGGGGSSTGYRMA----GYRILFASEFVEAARETYRANASPSTILDGRDIRQL 145
Query: 60 KTQD--------IPDHDVLLAGFPCQPFSQAG 83
+D + D+L PC FS AG
Sbjct: 146 TAEDLLFATGLKPGELDILDGSPPCASFSTAG 177
>gi|291562973|emb|CBL41789.1| DNA-methyltransferase (dcm) [butyrate-producing bacterium SS3/4]
Length = 367
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 30/103 (29%), Gaps = 25/103 (24%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
LKI F G G + L E E F +E +P +K Y+ + I
Sbjct: 6 LKIFSFFSGSGFLDLGFE----KNGFEIVFVNEFHPAFMKAYKYSRKKMKIKEPEYGYFN 61
Query: 55 --------------DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + G PC FS AG
Sbjct: 62 GDINEFLLNRKNELYQWMQDARKDGSLVGFIGGPPCPDFSIAG 104
>gi|325685522|gb|EGD27614.1| modification methylase BbvI [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 380
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 14/97 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQT------FNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54
+ + +LF G GG + + +++E +P +V+TY+ N N
Sbjct: 2 IFRTAELFSGPGGGAYAAKTSHFVDDKGEEWGFSHAWANEYDPDTVETYKLNILNNPDAK 61
Query: 55 DIAKIKTQDI--------PDHDVLLAGFPCQPFSQAG 83
+ + + D L+ GFPC +S G
Sbjct: 62 TVYCEDVRKFNLDDDEKLGNIDALIFGFPCNDYSVVG 98
>gi|171742574|ref|ZP_02918381.1| hypothetical protein BIFDEN_01687 [Bifidobacterium dentium ATCC
27678]
gi|171278188|gb|EDT45849.1| hypothetical protein BIFDEN_01687 [Bifidobacterium dentium ATCC
27678]
Length = 481
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT--- 61
F G GG+ L +EQ E + + N+P+ + GDI ++
Sbjct: 108 LSFFTGAGGLDLGMEQAGISAR----LLCENMREARMSIGVNWPDKALVGDITELDAVTV 163
Query: 62 ------QDIPDHDVLLAGFPCQPFSQAG 83
+ + DV+ G PCQ FS AG
Sbjct: 164 RRMAGLDEDTEIDVMFGGPPCQAFSTAG 191
>gi|313888225|ref|ZP_07821897.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845756|gb|EFR33145.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 321
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y A + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNALYGEEYKPKSVVGYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 NEKI-DLVMHGSPCQDFSRIG 82
>gi|56182698|gb|AAV84097.1| CviPII m5C DNA methyltransferase [Chlorella virus]
Length = 363
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K +LF GIGGI L VE E + + + + GDI K
Sbjct: 16 MKALELFAGIGGITHGLRGY-----VEPIAFCEYEKDA--SSFLSQRGLPVHGDITKFDA 68
Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83
+ D++ AG+PC FS AG
Sbjct: 69 SVYKNKIDIVTAGWPCTGFSTAG 91
>gi|56695946|ref|YP_166300.1| C-5 cytosine-specific family DNA methylase [Ruegeria pomeroyi
DSS-3]
gi|56677683|gb|AAV94349.1| DNA methylase, C-5 cytosine-specific family [Ruegeria pomeroyi
DSS-3]
Length = 373
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 27/88 (30%), Gaps = 13/88 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP------YSVKTYQANFPNTLIFGDI 56
DLFCG GG+ LE ++I + P + I
Sbjct: 4 TAIDLFCGAGGLSAGLEMA----GFTVLAGNDIFDAAGKTFEATHPRAKFIPGPIEDLTI 59
Query: 57 AK---IKTQDIPDHDVLLAGFPCQPFSQ 81
+ + VL G PCQ +S
Sbjct: 60 EHLLEVTGLKPGELTVLAGGPPCQAYSV 87
>gi|221108933|ref|XP_002155714.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase 1,
partial [Hydra magnipapillata]
Length = 1138
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ--------ANFPNTLIF 53
L+ D+F G GG+ L+Q V ++ E P + + Y+ N +
Sbjct: 643 LRTLDIFAGCGGLSEGLDQVGV---VNSCWAIEFEPSAAQAYRLNNPSAIVFNQDCNNVL 699
Query: 54 GDIAKIKTQD--------IPDHDVLLAGFPCQPFS 80
I + K +D + D+L G PCQ FS
Sbjct: 700 KQIMEGKEKDDLGQRLPRRGEVDLLCGGPPCQGFS 734
>gi|288941188|ref|YP_003443428.1| DNA-cytosine methyltransferase [Allochromatium vinosum DSM 180]
gi|288896560|gb|ADC62396.1| DNA-cytosine methyltransferase [Allochromatium vinosum DSM 180]
Length = 372
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K DLFCG+GG+ L + ++ +I+ Y+AN P I D+ +
Sbjct: 15 IKAVDLFCGVGGLTHGLSRG----GIQVMAGIDIDASCRYPYEANNPARFIEHDVGTLPP 70
Query: 62 ------QDIPDHDVLLAGFPCQPFS 80
+ D+ +L PCQPFS
Sbjct: 71 DLITPYYENADYTLLAGCAPCQPFS 95
>gi|325269501|ref|ZP_08136117.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM
16608]
gi|324988120|gb|EGC20087.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM
16608]
Length = 388
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYS--VKTYQANFPNTLIFGDIAKIKTQDIP 65
F GIG I ++ + NVE F+ +I+ DI + +
Sbjct: 39 FSGIGAIEHAFKRL--NLNVEIVFAGDIDANCKKAYFANYKISEEQWHTDIQNLDARPYK 96
Query: 66 -DHDVLLAGFPCQPFSQAG 83
D+ + G PCQ FS G
Sbjct: 97 GKVDLFVGGAPCQAFSIVG 115
>gi|213972219|ref|ZP_03400299.1| cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato
T1]
gi|289626827|ref|ZP_06459781.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|301386398|ref|ZP_07234816.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
Max13]
gi|302062510|ref|ZP_07254051.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
K40]
gi|213923026|gb|EEB56641.1| cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato
T1]
gi|330870292|gb|EGH05001.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 382
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKI 59
M + F G G + + + +C F+++ +P + + L GD+A +
Sbjct: 1 MANFYEFFAGGG-----MARAGLGPDWQCMFANDFDPKKAASYATNWGDDHLRVGDVAAL 55
Query: 60 KTQDIP-DHDVLLAGFPCQPFSQAG 83
T ++P D+ A FPCQ S AG
Sbjct: 56 TTTELPGVVDLAWASFPCQDLSLAG 80
>gi|330989663|gb|EGH87766.1| cytosine-specific methyltransferase [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 512
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ + GI ++ +E + +EI P+ ++P T GD+ K+
Sbjct: 10 LQYGSVCSGI----EAATAAWHPLGMEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGA 65
Query: 62 ----QDIPDHDVLLAGFPCQPFSQAG 83
I DVL+ G PCQ FS AG
Sbjct: 66 LALAGKIKAPDVLVGGTPCQAFSVAG 91
>gi|323350984|ref|ZP_08086641.1| modification methylase HgiDII [Streptococcus sanguinis VMC66]
gi|322122708|gb|EFX94417.1| modification methylase HgiDII [Streptococcus sanguinis VMC66]
Length = 352
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLFCG+GG+ ++ + +I+ S Y+ N T I D+ +I
Sbjct: 3 INAIDLFCGVGGLTYGIQ----KTGINVIAGYDIDEKSKFAYEYNNDATFILKDVKEIDD 58
Query: 62 QDIPD-------HDVLLAGFPCQPFS 80
++I + VL+ PCQPFS
Sbjct: 59 REISNLYPKDTDIKVLIGCAPCQPFS 84
>gi|288576182|ref|ZP_05978340.2| DNA (cytosine-5-)-methyltransferase [Neisseria mucosa ATCC 25996]
gi|288566126|gb|EFC87686.1| DNA (cytosine-5-)-methyltransferase [Neisseria mucosa ATCC 25996]
Length = 406
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+++ +F GIG + + + N F+ +I+P+ K+Y DI +
Sbjct: 33 IRLATVFSGIGAVEQAFYRL--NLNHTIVFAGDIDPHVKKSYLGNYQLDEGFWHDDITQF 90
Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83
+ + D+L+ G PCQ FS G
Sbjct: 91 DARKFRNQVDILVGGSPCQAFSMVG 115
>gi|224044835|ref|XP_002192893.1| PREDICTED: tRNA aspartic acid methyltransferase 1 [Taeniopygia
guttata]
Length = 399
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKI- 59
L++ +L+ GIGG+ L ++ H E + ++N + L I I
Sbjct: 4 LRVLELYSGIGGMHQALRESCRHA--EVVAAVDVNTLANAVYKHNFPSTPLWAKTIEGIT 61
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83
K D D++L PCQPF++ G
Sbjct: 62 LKEFDRLSFDMILLSPPCQPFTRTG 86
>gi|23306232|emb|CAD43079.1| DNA methyltransferase 1c [Paracentrotus lividus]
Length = 1375
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 31/95 (32%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------- 48
LK D+F G GG+ Q E ++ E + + Y+ N P
Sbjct: 1132 LKCLDVFAGCGGLSEGFHQAGI---CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELL 1188
Query: 49 ---NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1189 RLVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFS 1223
>gi|12230342|sp|Q27746|DNMT1_PARLI RecName: Full=DNA (cytosine-5)-methyltransferase PliMCI; AltName:
Full=DNA methyltransferase PliMCI; Short=DNA MTase
PliMCI; Short=M.PliMCI; AltName: Full=Dnmt1; AltName:
Full=MCMT
gi|1004286|emb|CAA90563.1| DNA (cytosine-5-)-methyltransferase [Paracentrotus lividus]
Length = 1612
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 31/95 (32%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------- 48
LK D+F G GG+ Q E ++ E + + Y+ N P
Sbjct: 1131 LKCLDVFAGCGGLSEGFHQAGI---CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELL 1187
Query: 49 ---NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1188 RLVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFS 1222
>gi|23306229|emb|CAD42182.3| DNA methyltransferase [Paracentrotus lividus]
Length = 1613
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 31/95 (32%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------- 48
LK D+F G GG+ Q E ++ E + + Y+ N P
Sbjct: 1132 LKCLDVFAGCGGLSEGFHQAGI---CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELL 1188
Query: 49 ---NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1189 RLVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFS 1223
>gi|23306234|emb|CAD43089.1| DNA methyltransferase 1e [Paracentrotus lividus]
Length = 1335
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 31/95 (32%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------- 48
LK D+F G GG+ Q E ++ E + + Y+ N P
Sbjct: 1132 LKCLDVFAGCGGLSEGFHQAGI---CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELL 1188
Query: 49 ---NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1189 RLVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFS 1223
>gi|23306233|emb|CAD43080.2| DNA methyltransferase 1d [Paracentrotus lividus]
Length = 1429
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 31/95 (32%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------- 48
LK D+F G GG+ Q E ++ E + + Y+ N P
Sbjct: 1132 LKCLDVFAGCGGLSEGFHQAGI---CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELL 1188
Query: 49 ---NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1189 RLVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFS 1223
>gi|23306230|emb|CAD43077.1| DNA methyltransferase 1a [Paracentrotus lividus]
Length = 1461
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 31/95 (32%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------- 48
LK D+F G GG+ Q E ++ E + + Y+ N P
Sbjct: 980 LKCLDVFAGCGGLSEGFHQAGI---CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELL 1036
Query: 49 ---NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1037 RLVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFS 1071
>gi|330835884|ref|YP_004410612.1| DNA-cytosine methyltransferase [Metallosphaera cuprina Ar-4]
gi|329568023|gb|AEB96128.1| DNA-cytosine methyltransferase [Metallosphaera cuprina Ar-4]
Length = 321
Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKT 61
K+ DLF G GG + E + ++N + +TY +NFP + DI +
Sbjct: 5 KVVDLFSGAGGFAKGF----KLQGFEISLAIDLNHAAARTYSSNFPTATVLEEDIRNVTG 60
Query: 62 QDI-----PDHDVLLAGFPCQPFSQA 82
+DI DV++ PC+PF+ A
Sbjct: 61 KDIIGLIGSRPDVVIGSPPCEPFTGA 86
>gi|160873497|ref|YP_001552813.1| DNA-cytosine methyltransferase [Shewanella baltica OS195]
gi|160859019|gb|ABX47553.1| DNA-cytosine methyltransferase [Shewanella baltica OS195]
gi|315265725|gb|ADT92578.1| DNA-cytosine methyltransferase [Shewanella baltica OS678]
Length = 385
Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------FPNTLIFGD 55
+K DLF G GG+ L + ++ + E++ + TY+AN P LI GD
Sbjct: 1 MKAIDLFSGAGGLSL----AAHQCGIDVIAAIELDTAASITYRANLIEQLKAPTKLINGD 56
Query: 56 IAKIKTQ--------DIPDHDVLLAGFPCQPFSQ 81
I ++ + ++LL G PCQ FS
Sbjct: 57 INEVDLPALMKELKLKSGELELLLGGPPCQGFST 90
>gi|83859530|ref|ZP_00953050.1| DNA-cytosine methyltransferase [Oceanicaulis alexandrii HTCC2633]
gi|83851889|gb|EAP89743.1| DNA-cytosine methyltransferase [Oceanicaulis alexandrii HTCC2633]
Length = 394
Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIKTQ 62
+ FCG G RL L + C F+++I+ + + GD+ +K
Sbjct: 13 YYEFFCGGGMARLGL-----GAHWRCHFANDIDADKANAYRDNFGDDHFHQGDVCALKPS 67
Query: 63 DIP-DHDVLLAGFPCQPFSQAG 83
D+P + D+ A FPCQ S AG
Sbjct: 68 DLPGEADLAWASFPCQDLSLAG 89
>gi|194303019|ref|YP_002014288.1| gp72 [Mycobacterium phage Boomer]
gi|194153067|gb|ACF34134.1| gp72 [Mycobacterium phage Boomer]
Length = 475
Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
ML + D+FCG GG +E ++ + I D+++I
Sbjct: 1 MLTLLDMFCGAGGSSTG---AVQVPGIEVRVAANHWKLAVETHGANHPTTDHICADLSQI 57
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ P+ D+L A C S A
Sbjct: 58 DPRLFPNTDILWASPSCTKHSIA 80
>gi|124027997|ref|YP_001013317.1| site-specific DNA methylase [Hyperthermus butylicus DSM 5456]
gi|123978691|gb|ABM80972.1| Site-specific DNA methylase [Hyperthermus butylicus DSM 5456]
Length = 319
Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
L++ DLF G GG + + NP + + DI ++
Sbjct: 4 LRLVDLFSGAGGFAEGFRRA----GFRILLGVDNNPAAIRSFKANFPEAVALAMDIQEVT 59
Query: 61 TQDI----PDHDVLLAGFPCQPFSQA 82
+ I DV++ PC+P++ A
Sbjct: 60 GKLIESLVGPVDVVIGSPPCEPYTGA 85
>gi|109522148|ref|YP_655825.1| gp64 [Mycobacterium phage PMC]
gi|91980848|gb|ABE67565.1| gp64 [Mycobacterium phage PMC]
Length = 475
Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
ML + D+FCG GG +E ++ + I D+++I
Sbjct: 1 MLTLLDMFCGAGGSSTG---AVQVPGIEVRVAANHWKLAVETHGANHPTTDHICADLSQI 57
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ P+ D+L A C S A
Sbjct: 58 DPRLFPNTDILWASPSCTKHSIA 80
>gi|72091983|ref|XP_780273.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase isoform 1
[Strongylocentrotus purpuratus]
gi|115972575|ref|XP_001178953.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase isoform 2
[Strongylocentrotus purpuratus]
Length = 1618
Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 31/95 (32%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------- 48
LK D+F G GG+ Q E ++ E + + ++ N P
Sbjct: 1137 LKCLDVFAGCGGLSEGFHQAGI---CESSWAIEKEEPAAQAFRLNNPGSTVFSDDCNELL 1193
Query: 49 ---NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1194 RLVMQGDKTSRTGQKLPQKGDVELLCGGPPCQGFS 1228
>gi|115972577|ref|XP_001178888.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase isoform 1
[Strongylocentrotus purpuratus]
Length = 1470
Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 31/95 (32%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------- 48
LK D+F G GG+ Q E ++ E + + ++ N P
Sbjct: 989 LKCLDVFAGCGGLSEGFHQAGI---CESSWAIEKEEPAAQAFRLNNPGSTVFSDDCNELL 1045
Query: 49 ---NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1046 RLVMQGDKTSRTGQKLPQKGDVELLCGGPPCQGFS 1080
>gi|269955376|ref|YP_003325165.1| C-5 cytosine-specific DNA methylase [Xylanimonas cellulosilytica
DSM 15894]
gi|269304057|gb|ACZ29607.1| C-5 cytosine-specific DNA methylase [Xylanimonas cellulosilytica
DSM 15894]
Length = 553
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
L +TDLFCG GG + V+ ++ + + + DI++
Sbjct: 39 LTLTDLFCGAGGSSTG---AVSVPGVQVRLAANHWDKAIETHNTNHPDVDHLQADISQTD 95
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
+ +P D+L A C S+A
Sbjct: 96 PRYVPRTDMLWASPECTNHSRA 117
>gi|227484740|ref|ZP_03915056.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus
lactolyticus ATCC 51172]
gi|227237262|gb|EEI87277.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus
lactolyticus ATCC 51172]
Length = 321
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y A + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNALYGEDYKPKSVVGYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 N-EQIDLVMHGSPCQDFSRIG 82
>gi|294637303|ref|ZP_06715601.1| DNA (cytosine-5-)-methyltransferase [Edwardsiella tarda ATCC
23685]
gi|291089511|gb|EFE22072.1| DNA (cytosine-5-)-methyltransferase [Edwardsiella tarda ATCC
23685]
Length = 722
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
++ + GI + + +EI + +P+ + GD+ KI
Sbjct: 1 MRYGSVCSGI----EAASVAWEPLGWTPAWFAEIEEFPSAVLAQRWPSVVNLGDMTKIAA 56
Query: 60 --KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D+ DVL+ G PCQ FS AG
Sbjct: 57 AVRAGDVEAPDVLVGGTPCQAFSVAG 82
>gi|156365066|ref|XP_001626663.1| predicted protein [Nematostella vectensis]
gi|156213548|gb|EDO34563.1| predicted protein [Nematostella vectensis]
Length = 1263
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
L+ D+F G GG+ L Q E ++ E + + Y+ N P +F D
Sbjct: 789 LRSLDVFAGCGGLSEGLHQAGVA---ESLWAIEKEEPAAQAYRLNNPGCTVFTDDCNTLL 845
Query: 59 -------------IKTQDIPDHDVLLAGFPCQPFS 80
K + ++L G PCQ FS
Sbjct: 846 KLAMEGEATNSTGQKIPQRGEVELLCGGPPCQGFS 880
>gi|16077673|ref|NP_388487.1| DNA-methyltransferase [Bacillus subtilis subsp. subtilis str. 168]
gi|221308442|ref|ZP_03590289.1| hypothetical protein Bsubs1_03403 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312764|ref|ZP_03594569.1| hypothetical protein BsubsN3_03379 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317687|ref|ZP_03598981.1| hypothetical protein BsubsJ_03338 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321963|ref|ZP_03603257.1| hypothetical protein BsubsS_03409 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|81669163|sp|O34939|YDIO_BACSU RecName: Full=Probable BsuMI modification methylase subunit ydiO;
Short=M1.BsuMI; AltName: Full=Cytosine-specific
methyltransferase M1.BsuMI
gi|2521997|dbj|BAA22750.1| ydiO [Bacillus subtilis]
gi|2632919|emb|CAB12425.1| DNA-methyltransferase (cytosine-specific) [Bacillus subtilis subsp.
subtilis str. 168]
Length = 427
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 18/97 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYS-VKTYQANFPNTLIFGDIAK 58
+ I DLF G GG+ L + + + F+ ++N + + P+ + I K
Sbjct: 84 INIADLFSGCGGLSLGVWEACRALGINPRFSFACDLNEAALSVYEKNFSPDFSLNESIEK 143
Query: 59 IKTQD---------------IPDHDVLLAGFPCQPFS 80
+ + D +LAG PCQ S
Sbjct: 144 HINGELGAPLTVEEQRIKDKVKKIDFILAGPPCQGHS 180
>gi|330882498|gb|EGH16647.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 335
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
++ G GG L LE EI P + T + + D+ +
Sbjct: 21 FTSLEMCAGAGGQALGLEMA----GFGHEALVEIEPPACATLRLNRPEWNVKEEDLRQFN 76
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D++ G PC PFS+AG
Sbjct: 77 GSPFFGVDLVAGGVPCPPFSKAG 99
>gi|16125285|ref|NP_419849.1| C-5 cytosine-specific DNA methylase [Caulobacter crescentus CB15]
gi|221234022|ref|YP_002516458.1| DNA-cytosine methyltransferase [Caulobacter crescentus NA1000]
gi|13422327|gb|AAK23017.1| C-5 cytosine-specific DNA methylase [Caulobacter crescentus CB15]
gi|220963194|gb|ACL94550.1| DNA-cytosine methyltransferase [Caulobacter crescentus NA1000]
Length = 335
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN------VECFFSSEINPYSVKTYQANFPNTLIFGD 55
+ + LFCG GG+ E+ ++ S +N S + + + D
Sbjct: 1 MVLLSLFCGAGGLDQGFEEAGFEVGLALDRKLDSVKSYNLNRPSAAVARVKDLSEITIQD 60
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
I + ++ ++ G PCQ FSQA
Sbjct: 61 IDDLYGKEF-SPSGVIGGPPCQSFSQA 86
>gi|302531233|ref|ZP_07283575.1| DNA-cytosine methyltransferase [Streptomyces sp. AA4]
gi|302440128|gb|EFL11944.1| DNA-cytosine methyltransferase [Streptomyces sp. AA4]
Length = 371
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----IAK 58
+ F GIG +RL LE + +S++I P Y+A+F + +A
Sbjct: 8 TAAEFFAGIGLVRLGLEPA----GFDVAWSNDIEPAKQAMYEAHFNDQGAHEYVLGDVAA 63
Query: 59 IKTQDIPDH-DVLLAGFPCQPFSQAG 83
++ D+P + A FPC S AG
Sbjct: 64 LRGADLPAGLSLAWASFPCTDLSLAG 89
>gi|261381417|ref|ZP_05985990.1| DNA (cytosine-5-)-methyltransferase [Neisseria subflava NJ9703]
gi|284795594|gb|EFC50941.1| DNA (cytosine-5-)-methyltransferase [Neisseria subflava NJ9703]
Length = 420
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 30/127 (23%), Gaps = 49/127 (38%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---------- 51
L+ DLF G GG+ Q + E + + T Q
Sbjct: 4 LRFLDLFAGAGGLSEGFIQA----GFKPVAHIESDKAACFTLQTRMAYHWLKSIDKLDVY 59
Query: 52 ----------------IFGDIAKIKTQ-------------------DIPDHDVLLAGFPC 76
I I K D+++ G PC
Sbjct: 60 VDYLNGKLSRTEFYKIIPEHITKTVINMEISENTLKTLFNEIDDLLKDSPLDLIVGGPPC 119
Query: 77 QPFSQAG 83
Q +S G
Sbjct: 120 QAYSLVG 126
>gi|291335050|gb|ADD94680.1| cytosine specific DNA methyltransferase DDEM [uncultured phage
MedDCM-OCT-S08-C620]
Length = 129
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---------TLI 52
+ F G GG L +++E + +TY+AN PN +
Sbjct: 29 FNVVSTFSGCGGSCLGYRMA----GYRVLYANEFIKAAQETYKANHPNSILDSNDVRQIR 84
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+I + + D+ PC FS +G
Sbjct: 85 PEEILERINLKKGELDLFDGSPPCASFSISG 115
>gi|291539796|emb|CBL12907.1| Site-specific DNA methylase [Roseburia intestinalis XB6B4]
Length = 107
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
DLFCG GG+ L LEQ+ N+ EIN + +TY N ++ DI I +I
Sbjct: 11 IDLFCGAGGLSLGLEQS----NITVPLGVEINAIAAQTYTNNLNGNVLQDDIRNITGHEI 66
Query: 65 --------PDHDVLLAGFPCQPFS 80
+ +L PCQ FS
Sbjct: 67 LEQLNLQVGELFLLAGCPPCQTFS 90
>gi|171779450|ref|ZP_02920414.1| hypothetical protein STRINF_01295 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gi|171282067|gb|EDT47498.1| hypothetical protein STRINF_01295 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 133
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL L + EC EI+ ++ K+Y + F DI ++
Sbjct: 4 MKFLDLFAGIGGFRLGLT----RQGHECIGFCEIDKFARKSYKAIYETEGEIEFHDIRQV 59
Query: 60 KTQDI----PDHDVLLAG 73
QD D++ G
Sbjct: 60 TDQDFRQLRGQVDIICGG 77
>gi|326802740|ref|YP_004320558.1| DNA (cytosine-5-)-methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651598|gb|AEA01781.1| DNA (cytosine-5-)-methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 321
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y A + + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNALYGESYKAKSVIGYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 NDKI-DLVMHGSPCQDFSRIG 82
>gi|218128915|ref|ZP_03457719.1| hypothetical protein BACEGG_00487 [Bacteroides eggerthii DSM
20697]
gi|217988878|gb|EEC55195.1| hypothetical protein BACEGG_00487 [Bacteroides eggerthii DSM
20697]
Length = 361
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 10/85 (11%)
Query: 2 LKITDLFCGIGGIRLDLE------QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55
+++ DLFCGIGG+ ++ + + C ++ E N + ++
Sbjct: 16 IEVVDLFCGIGGLSYGMKSKGLKIKAGFDLDWTCLYAYETNNEAKFIFKDIRTVQKED-- 73
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFS 80
I VL PCQPFS
Sbjct: 74 --IIPFYSKKSIKVLAGCAPCQPFS 96
>gi|66806465|ref|XP_636955.1| DNA -methyltransferase [Dictyostelium discoideum AX4]
gi|74852778|sp|Q54JH6|CMT1_DICDI RecName: Full=DNA (cytosine-5)-methyltransferase
gi|60465358|gb|EAL63449.1| DNA -methyltransferase [Dictyostelium discoideum AX4]
Length = 379
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--KI 59
L++ + + GIGG+ L+++ + S +IN + Y+ F I +
Sbjct: 4 LRVLEFYSGIGGMHYGLQESGVD--FQVIQSFDINTNANLNYKYTFNEDSSQKSIESYSV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ + + L PCQPF++ G
Sbjct: 62 EELEGFKANAWLMSPPCQPFTRLG 85
>gi|170719133|ref|YP_001784281.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336]
gi|168827262|gb|ACA32633.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336]
Length = 408
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+++ F GIG I ++ N F+ +I+P+ K+Y + DI
Sbjct: 34 IRLATTFSGIGAIEQAFKRL--ELNHCIVFAGDIDPHVKKSYLANYDLSEEHWHSDITTF 91
Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83
D D+L+ G PCQ FS G
Sbjct: 92 DAIPYRDQVDILVGGSPCQAFSMVG 116
>gi|157953548|ref|YP_001498439.1| hypothetical protein AR158_C358L [Paramecium bursaria Chlorella
virus AR158]
gi|156068196|gb|ABU43903.1| hypothetical protein AR158_C358L [Paramecium bursaria Chlorella
virus AR158]
Length = 370
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 30/84 (35%), Gaps = 8/84 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNV-ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
ML +LF GIGGI L R + E N + + +
Sbjct: 1 MLDTLELFAGIGGITYGL------RGFAKPAAFVEWNEEAKNVLKRHKVPIFDDVTTFDA 54
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D++ AG+PC FS AG
Sbjct: 55 TPFKDK-VDMVSAGWPCTGFSTAG 77
>gi|83942245|ref|ZP_00954706.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. EE-36]
gi|83846338|gb|EAP84214.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. EE-36]
Length = 384
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 7/82 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ FCG G +R L+ +C +++I+ K Y N+ + D
Sbjct: 11 YAEFFCGGGMVRAALQD-----RWDCVLANDIDAMKCKVYAQNWGQAALHQGDIATMPDD 65
Query: 64 --IPDHDVLLAGFPCQPFSQAG 83
D+ A PCQ FS AG
Sbjct: 66 LLTRQIDMYWASSPCQDFSLAG 87
>gi|304399150|ref|ZP_07381018.1| DNA adenine methylase [Pantoea sp. aB]
gi|304353390|gb|EFM17769.1| DNA adenine methylase [Pantoea sp. aB]
Length = 808
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 8/87 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI- 59
M+ + GI + + + +EI + FP GD+ I
Sbjct: 1 MITYGSVCSGI----EAASVAWEGLGWKAAWFAEIEKFPAAVLAHRFPAVPNLGDMTTIA 56
Query: 60 ---KTQDIPDHDVLLAGFPCQPFSQAG 83
+ IP V++ G PCQ FS AG
Sbjct: 57 AGVRAGSIPAPAVMVGGTPCQAFSIAG 83
>gi|218884576|ref|YP_002428958.1| Cytosine-specific DNA methylase [Desulfurococcus kamchatkensis
1221n]
gi|218766192|gb|ACL11591.1| Cytosine-specific DNA methylase [Desulfurococcus kamchatkensis
1221n]
Length = 324
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+ K D+F G GG L T + + + + TY+ NFP+ L+ + K
Sbjct: 4 VYKYIDVFSGAGGFSLGFHLTGR---FKSLLAIDNFKPAALTYKTNFPHALVVNEDVKEL 60
Query: 61 TQD-------IPDHDVLLAGFPCQPFSQA 82
++ + DV++ PC+PF+ A
Sbjct: 61 DKELLTGIVKPDEIDVIIGSPPCEPFTGA 89
>gi|116871711|ref|YP_848492.1| cytosine methyl transferase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116740589|emb|CAK19709.1| cytosine methyl transferase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 351
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 11/87 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
++ DLFCG+GG+ ++ + +I +Y+ N I DI I
Sbjct: 2 IVNAVDLFCGVGGLTCGVQ----KTGINVIAGYDIAKECQYSYEYNNKARFIHKDIKDIS 57
Query: 61 TQ-------DIPDHDVLLAGFPCQPFS 80
+ D +L+ PCQPFS
Sbjct: 58 DNEISALYPENTDIRLLMGCAPCQPFS 84
>gi|194335097|ref|YP_002016957.1| DNA-cytosine methyltransferase [Prosthecochloris aestuarii DSM
271]
gi|194312915|gb|ACF47310.1| DNA-cytosine methyltransferase [Prosthecochloris aestuarii DSM
271]
Length = 340
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 11/83 (13%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIKTQD 63
D+F G+GG+ L + + + EI+ + K Y+ + +I DI I T++
Sbjct: 6 IDIFSGVGGLTEGLHKA----GFQTELAFEIDELASKVYKLNHKKTKVITDDIRNISTEN 61
Query: 64 ------IPDHDVLLAGFPCQPFS 80
+L PCQ FS
Sbjct: 62 VKQELGNKTIHLLAGCPPCQGFS 84
>gi|329937998|ref|ZP_08287480.1| putative 5-methylcytosine methyltransferase [Streptomyces
griseoaurantiacus M045]
gi|329302955|gb|EGG46844.1| putative 5-methylcytosine methyltransferase [Streptomyces
griseoaurantiacus M045]
Length = 426
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 8/83 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA---NFPNTLIFGDIAKIK 60
+ DLF G GG+ + E + + T A + + + +
Sbjct: 16 VLDLFAGPGGLDSACHRLGIPS-----LGIEWDKSACLTRYAAGLDTLHADVSAVRRESF 70
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
P+ +VL G PCQ +S AG
Sbjct: 71 ESLPPEINVLAGGPPCQTYSVAG 93
>gi|317505386|ref|ZP_07963311.1| DNA (cytosine-5-)-methyltransferase [Prevotella salivae DSM 15606]
gi|315663493|gb|EFV03235.1| DNA (cytosine-5-)-methyltransferase [Prevotella salivae DSM 15606]
Length = 436
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 34/130 (26%), Gaps = 52/130 (40%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK-------------------- 41
+ DLF G GG+ + E E++ Y+
Sbjct: 3 YRFIDLFAGAGGLSEGFIRA----GYEPIAHIEMDHYACDSLKTRAAFHYLKENGKLEIY 58
Query: 42 --------------TYQANFPNTLIFGDI--------------AKIKTQDIPDHDVLLAG 73
P ++I I K + D+++ G
Sbjct: 59 EEYLKNKKEKTDGSWLWNKVPKSVIDSVIQEAIGKETLPSLFERVDKLCNGTPVDMIIGG 118
Query: 74 FPCQPFSQAG 83
PCQ +S AG
Sbjct: 119 PPCQAYSVAG 128
>gi|238059022|ref|ZP_04603734.1| DNA-cytosine methyltransferase [Micromonospora sp. ATCC 39149]
gi|237886458|gb|EEP75286.1| DNA-cytosine methyltransferase [Micromonospora sp. ATCC 39149]
Length = 442
Score = 58.4 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIKTQ 62
+ DLF G GG+ +Q E +S+I+P + T+ I GDI + +
Sbjct: 1 MLDLFAGAGGLSQGFQQA----GFEIAGASDIDPDACATFALNFPGAQAICGDIRRPELH 56
Query: 63 DI-----PDHDVLLAGFPCQPFSQ 81
+ DV++ G PCQ FSQ
Sbjct: 57 EHIIEVGRGVDVVVGGPPCQAFSQ 80
>gi|169834659|ref|YP_001693426.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str.
Okra]
gi|169123207|gb|ACA47042.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str.
Okra]
Length = 490
Score = 58.4 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + +F G G + + + F+ + + + +TY N + ++ DI+K+ +
Sbjct: 176 LTVCSIFSGAGLMDKSF-----LDDFDIIFALDNDRAACETYGKNLGSHILHEDISKV-S 229
Query: 62 QDIPDHDVLLAGFPCQPFSQ 81
+IP VL+ G PCQ FS
Sbjct: 230 NNIPHATVLIGGSPCQGFSN 249
>gi|86141746|ref|ZP_01060270.1| DNA-cytosine methyltransferase [Leeuwenhoekiella blandensis MED217]
gi|85831309|gb|EAQ49765.1| DNA-cytosine methyltransferase [Leeuwenhoekiella blandensis MED217]
Length = 410
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 29/128 (22%), Gaps = 50/128 (39%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L DLF G GG+ E EI+ + +T + + +
Sbjct: 4 LNFIDLFSGAGGLSEGFINA----GFEPIAHVEIDAKACETLETRLIYHKLKSEDKLKDY 59
Query: 62 QDI----------------------------------------------PDHDVLLAGFP 75
D+++ G P
Sbjct: 60 YKYILGDISRSDFLEKNSSSTISNSVINTAIGGDNNKVIFAKIDNLVKGKPVDLIVGGPP 119
Query: 76 CQPFSQAG 83
CQ +S G
Sbjct: 120 CQAYSLVG 127
>gi|288932478|ref|YP_003436538.1| DNA-cytosine methyltransferase [Ferroglobus placidus DSM 10642]
gi|288894726|gb|ADC66263.1| DNA-cytosine methyltransferase [Ferroglobus placidus DSM 10642]
Length = 301
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI D+F G GG E + + ++V TY+ANF + D+
Sbjct: 1 MKIADIFAGAGGFARGF----VEEKFEVVVAVDSFKHAVNTYKANFDADVFQVDVKNFSG 56
Query: 62 QDIPDHDV--LLAGFPCQPFSQA 82
+ + D+ V ++A PC+ F++A
Sbjct: 57 KMLKDYGVEMIIASPPCEAFTKA 79
>gi|111185554|gb|AAI19484.1| Dnmt1 protein [Mus musculus]
Length = 197
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N T+ D +
Sbjct: 36 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLL 92
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D ++L G PCQ FS
Sbjct: 93 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFS 127
>gi|300813808|ref|ZP_07094115.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus sp. oral taxon
836 str. F0141]
gi|300512098|gb|EFK39291.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus sp. oral taxon
836 str. F0141]
Length = 321
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y A + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNALYGEDYKAKSVVGYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ + D+++ G PCQ FS+ G
Sbjct: 63 N-ENIDLVMHGSPCQDFSRIG 82
>gi|315029938|gb|EFT41870.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX4000]
Length = 317
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M++I +LF GIG R L + E N +V++Y A F + + + +
Sbjct: 1 MIQILELFGGIGAPRKALINLGIP--HKSIDYVEWNEKAVRSYNAMFEKEIKYQPQSVVG 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
P D+L+ G PCQ FS G
Sbjct: 59 WNLKP--DILVHGSPCQDFSIGG 79
>gi|281416239|ref|YP_003347588.1| DNA cytosine methyltransferase [Enterococcus phage phiFL3A]
gi|270209504|gb|ACZ64045.1| DNA cytosine methyltransferase [Enterococcus phage phiFL3A]
gi|270209572|gb|ACZ64112.1| DNA cytosine methyltransferase [Enterococcus phage phiFL3B]
Length = 317
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M++I +LF GIG R L + E N +V++Y A F + + + +
Sbjct: 1 MIQILELFGGIGAPRKALINLGIP--HKSIDYVEWNEKAVRSYNAMFEKEIKYQPQSVVG 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
P D+L+ G PCQ FS G
Sbjct: 59 WNLKP--DILVHGSPCQDFSIGG 79
>gi|254932546|ref|ZP_05265905.1| cytosine methyl transferase [Listeria monocytogenes HPB2262]
gi|293584103|gb|EFF96135.1| cytosine methyl transferase [Listeria monocytogenes HPB2262]
gi|332310737|gb|EGJ23832.1| DNA (Cytosine-5-)-methyltransferase [Listeria monocytogenes str.
Scott A]
Length = 351
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 11/87 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
++ DLFCG+GG+ ++ + +I +Y+ N I DI +I
Sbjct: 2 IVNAVDLFCGVGGLTCGVQ----KTGINVIAGYDIAKECQYSYEYNNKARFIHKDIKEIS 57
Query: 61 T-------QDIPDHDVLLAGFPCQPFS 80
+ D +L+ PCQPFS
Sbjct: 58 DDEISALYPENTDIRLLMGCAPCQPFS 84
>gi|12275200|emb|CAC22275.1| cytosine methyl transferase [Listeria monocytogenes]
Length = 352
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 11/87 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
++ DLFCG+GG+ ++ + +I +Y+ N I DI +I
Sbjct: 2 IVNAVDLFCGVGGLTCGVQ----KTGINVIAGYDIAKECQYSYEYNNKARFIHKDIKEIS 57
Query: 61 T-------QDIPDHDVLLAGFPCQPFS 80
+ D +L+ PCQPFS
Sbjct: 58 DDEISALYPENTDIRLLMGCAPCQPFS 84
>gi|258611549|ref|ZP_05233453.2| methylase [Listeria monocytogenes FSL N3-165]
gi|258601173|gb|EEW14498.1| methylase [Listeria monocytogenes FSL N3-165]
Length = 469
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 14/95 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPY-----------SVKTYQANF 47
L I +F G+GG + L +S++ P +
Sbjct: 3 LNIFSMFDGVGGFIVGLNDANEAIEKEMFRTTYSNQFEPSKKAQDAYEVGVYRFPEMNHI 62
Query: 48 PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
P+ ++ K + ++++ GFPCQ +S A
Sbjct: 63 PDDIMTVSDNKFQEMHDAGVNMIVGGFPCQDYSVA 97
>gi|62946656|gb|AAY22439.1| methylase [Listeria monocytogenes]
Length = 469
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 14/95 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPY-----------SVKTYQANF 47
L I +F G+GG + L +S++ P +
Sbjct: 3 LNIFSMFDGVGGFIVGLNDANEAIEKEMFRTTYSNQFEPSKKAQDAYEVGVYRFPEMNHI 62
Query: 48 PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
P+ ++ K + ++++ GFPCQ +S A
Sbjct: 63 PDDIMTVSDNKFQEMHDAGVNMIVGGFPCQDYSVA 97
>gi|46906547|ref|YP_012936.1| C-5 cytosine-specific DNA methylase family protein [Listeria
monocytogenes serotype 4b str. F2365]
gi|46879812|gb|AAT03113.1| C-5 cytosine-specific DNA methylase family protein [Listeria
monocytogenes serotype 4b str. F2365]
Length = 469
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 14/95 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPY-----------SVKTYQANF 47
L I +F G+GG + L +S++ P +
Sbjct: 3 LNIFSMFDGVGGFIVGLNDANEAIEKEMFRTTYSNQFEPSKKAQDAYEVGLYRFPEMNHI 62
Query: 48 PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
P+ ++ K + ++++ GFPCQ +S A
Sbjct: 63 PDDIMTVSDNKFQEMHDAGVNMIVGGFPCQDYSVA 97
>gi|260557494|ref|ZP_05829709.1| site-specific DNA-methyltransferase [Acinetobacter baumannii ATCC
19606]
gi|193076851|gb|ABO11576.2| site-specific DNA-methyltransferase [Acinetobacter baumannii ATCC
17978]
gi|260409120|gb|EEX02423.1| site-specific DNA-methyltransferase [Acinetobacter baumannii ATCC
19606]
Length = 304
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 30/88 (34%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----TLIFGDI 56
+ LF G GG L + E + Y+ + + I+ DI
Sbjct: 1 MNELALFAGAGGGVL----ASYLLGWRTVCAVERDAYAAQVLAQRQNDGILEAFPIWSDI 56
Query: 57 AKIKTQDI-PDHDVLLAGFPCQPFSQAG 83
+ DV+ GFPCQ S AG
Sbjct: 57 TTFDGKPWQGIVDVISGGFPCQDISSAG 84
>gi|156741374|ref|YP_001431503.1| DNA-cytosine methyltransferase [Roseiflexus castenholzii DSM
13941]
gi|156232702|gb|ABU57485.1| DNA-cytosine methyltransferase [Roseiflexus castenholzii DSM
13941]
Length = 387
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--FGDIAKI 59
L + F G G R+ L C F+++I+P Y+ NF DI ++
Sbjct: 4 LTFYEFFAGGGLARIGL-----GPQWTCLFANDIDPKKADVYRRNFSGAPELVVADIHRV 58
Query: 60 KTQDIPDHDVL-LAGFPCQPFSQAG 83
T +P +L A FPCQ S AG
Sbjct: 59 TTDMLPGRALLAWASFPCQDLSLAG 83
>gi|26990617|ref|NP_746042.1| DNA-cytosine methyltransferase [Pseudomonas putida KT2440]
gi|24985601|gb|AAN69506.1|AE016584_14 DNA-cytosine methyltransferase [Pseudomonas putida KT2440]
Length = 553
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + GI ++ + +EI P+ ++P T GD+ ++
Sbjct: 3 ITYGSVCSGI----EAATVAWHPLGWRAEWYAEIEPFPCAVLAHHYPATPNHGDMTRLAA 58
Query: 62 Q----DIPDHDVLLAGFPCQPFSQAG 83
IP +VL+ G PCQ FS AG
Sbjct: 59 MVLSGKIPAPEVLVGGTPCQAFSVAG 84
>gi|260866454|ref|YP_003232856.1| putative DNA modification methylase [Escherichia coli O111:H-
str. 11128]
gi|257762810|dbj|BAI34305.1| predicted DNA modification methylase [Escherichia coli O111:H-
str. 11128]
Length = 356
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV---------KTYQANFPNTLI 52
++ G GG L L EI+P + +
Sbjct: 4 YTSVEICAGAGGQALGLHNA----GFTHRALVEIDPAACETLRLNNELHSLGWENIIEGC 59
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
A+ + D D++ G PC PFS+AG
Sbjct: 60 VKHFAEHTAYNFSDIDLVAGGVPCPPFSKAG 90
>gi|37524602|ref|NP_927946.1| hypothetical protein plu0600 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784026|emb|CAE12895.1| unnamed protein product [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 379
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIKT 61
+ F GIG R LE ++ ++++ + N L+ D+ +
Sbjct: 13 TALEFFAGIGLARAGLELA----GIKTLWANDYDINKKAMYEGQWGGNELLLADVHSLCG 68
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+P DV + PC S AG
Sbjct: 69 DDLPTVDVAWSSSPCTDLSLAG 90
>gi|46200907|ref|ZP_00207896.1| COG0270: Site-specific DNA methylase [Magnetospirillum
magnetotacticum MS-1]
Length = 561
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ GI + F +EI P+ ++P+ GD+ I Q
Sbjct: 27 YGSVCSGI----EAATVAWEPLGWRPAFFAEIEPFPSAVLAHHYPHVPNLGDMTAIDGQA 82
Query: 64 I-PDHDVLLAGFPCQPFSQAG 83
DVL+ G PCQ FS AG
Sbjct: 83 WRGKIDVLVGGTPCQAFSVAG 103
>gi|213967437|ref|ZP_03395585.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
T1]
gi|213927738|gb|EEB61285.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
T1]
Length = 498
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
L+ + GI ++ +E + +EI P+ ++P T GD+ K
Sbjct: 10 LQYGSVCSGI----EAATAAWHPLGMEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGA 65
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I DVL+ G PCQ FS AG
Sbjct: 66 LVLAGKIDAPDVLVGGTPCQAFSVAG 91
>gi|325696380|gb|EGD38271.1| modification methylase HgiDII [Streptococcus sanguinis SK160]
Length = 358
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--------- 55
DLF G GG L + + EI+P +VKTY+ N P +
Sbjct: 7 IDLFSGAGGTTSGL----KKSGINVQVAIEIDPVAVKTYKLNNPEVYVIDRDIKLVSGDE 62
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + D +L+A PCQ FS G
Sbjct: 63 IKQHLKIGSDDKVMLVACPPCQGFSTIG 90
>gi|157952715|ref|YP_001497607.1| hypothetical protein NY2A_B411L [Paramecium bursaria Chlorella
virus NY2A]
gi|155122942|gb|ABT14810.1| hypothetical protein NY2A_B411L [Paramecium bursaria Chlorella
virus NY2A]
Length = 370
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 30/84 (35%), Gaps = 8/84 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNV-ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
ML +LF GIGGI L R + E N + + +
Sbjct: 1 MLDTLELFAGIGGITYGL------RGFAKPAAFVEWNEEAKNVLKRHKVPIFDDVTTFDA 54
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D++ AG+PC FS AG
Sbjct: 55 TPFKDK-VDMVSAGWPCTGFSTAG 77
>gi|145346921|ref|XP_001417930.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578158|gb|ABO96223.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 820
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ LF G+GG+ L L+Q E + + + A FP + D+A++
Sbjct: 4 LRVASLFSGVGGLDLGLQQA----GHRIELMVERDAHCKQVLSARFPGVALLNDVAEVLP 59
Query: 62 QDIPDHDVLLAGFPCQPFS 80
+ + D ++AGFPC S
Sbjct: 60 FMLENIDCVVAGFPCNDCS 78
>gi|302559403|ref|ZP_07311745.1| modification methylase NaeI [Streptomyces griseoflavus Tu4000]
gi|302477021|gb|EFL40114.1| modification methylase NaeI [Streptomyces griseoflavus Tu4000]
Length = 429
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52
L + ++ G GG L LE+ E + E++ + T + N P +
Sbjct: 4 LHVVEICAGAGGQALGLERA----GFEHALAVELDANAAATLRRNRPAWHVVEGDVADPG 59
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+T + D+L G PC PF+ AG
Sbjct: 60 TWTPEDYRTVNGEQLDLLAGGVPCPPFTIAG 90
>gi|71274663|ref|ZP_00650951.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Dixon]
gi|71899625|ref|ZP_00681779.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Ann-1]
gi|71164395|gb|EAO14109.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Dixon]
gi|71730577|gb|EAO32654.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Ann-1]
Length = 329
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
++ G GG L LE E+ P + T + +I D+ +
Sbjct: 15 FNSLEMCAGAGGQALGLEM----VGFNHAALVELEPTACATLRLNRPAWNVIEDDLRRFD 70
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D++ G PC PFS+AG
Sbjct: 71 GLPYQGIDLVAGGVPCPPFSKAG 93
>gi|297527509|ref|YP_003669533.1| DNA-cytosine methyltransferase [Staphylothermus hellenicus DSM
12710]
gi|297256425|gb|ADI32634.1| DNA-cytosine methyltransferase [Staphylothermus hellenicus DSM
12710]
Length = 323
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIK 60
K DLFCG GG T + P + + ++ DI +I+
Sbjct: 5 YKFIDLFCGAGGFAEGFILTNR---FRSILGIDNFRPAAQTYKINFPDSIVVMEDIKRIR 61
Query: 61 TQ------DIPDHDVLLAGFPCQPFSQA 82
D + DV++ PC+PF+ A
Sbjct: 62 NDDLIEIVDPEEIDVVIGSPPCEPFTGA 89
>gi|296453364|ref|YP_003660507.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
longum JDM301]
gi|296182795|gb|ADG99676.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
longum JDM301]
Length = 392
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ-- 62
+ F GIG RL LE+ + +S++I+ + Y+ NF +T + ++
Sbjct: 18 LEFFAGIGLARLGLEEA----GFQVEWSNDIDAAKCEMYRNNFTDTPGHTLVEGDMSELS 73
Query: 63 -DIPDHD--VLLAGFPCQPFSQAG 83
D HD + PC S AG
Sbjct: 74 GDDLPHDASIAWGSSPCTDLSLAG 97
>gi|225691140|gb|ACO06242.1| 5'-methylcytosine methyltransferase M.BbrI [Bifidobacterium breve
UCC2003]
Length = 392
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ-- 62
+ F GIG RL LE+ + +S++I+ + Y+ NF +T + ++
Sbjct: 18 LEFFAGIGLARLGLEEA----GFQVEWSNDIDAAKCEMYRNNFTDTPGHTLVEGDMSELS 73
Query: 63 -DIPDHD--VLLAGFPCQPFSQAG 83
D HD + PC S AG
Sbjct: 74 GDDLPHDASIAWGSSPCTDLSLAG 97
>gi|67540936|ref|XP_664242.1| hypothetical protein AN6638.2 [Aspergillus nidulans FGSC A4]
gi|28208637|gb|AAO37378.1|AF428247_1 c5 cytosine methyltransferase DmtA [Emericella nidulans]
gi|40738977|gb|EAA58167.1| hypothetical protein AN6638.2 [Aspergillus nidulans FGSC A4]
gi|259480219|tpe|CBF71150.1| TPA: C5 cytosine methyltransferase DmtAPutative uncharacterized
protein ; [Source:UniProtKB/TrEMBL;Acc:Q876R1]
[Aspergillus nidulans FGSC A4]
Length = 615
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60
D FCG GG+ E ++ ++ ++ P++ TY+ NFPN DI
Sbjct: 309 YTFGDGFCGAGGVSCGAEAA----GLDIKWAFDLCPHAAATYRLNFPNVECEGSDIFSFM 364
Query: 61 --TQDIPDHDVLLAGFPCQPFSQA 82
++ D+ PCQ FS A
Sbjct: 365 TSNEEFMRVDISHGSPPCQTFSPA 388
>gi|333025812|ref|ZP_08453876.1| putative C-5 cytosine-specific DNA methylase [Streptomyces sp.
Tu6071]
gi|332745664|gb|EGJ76105.1| putative C-5 cytosine-specific DNA methylase [Streptomyces sp.
Tu6071]
Length = 503
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 27/82 (32%), Gaps = 3/82 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L TDLFCG GG L ++ + + D+
Sbjct: 3 LTFTDLFCGAGGSSTGLVAAGYDLR---LAANHWQRAVETHAANHPGADHLCADVNNYDM 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ +P DVL A C S AG
Sbjct: 60 RRLPRTDVLWASPICTEISPAG 81
>gi|195996059|ref|XP_002107898.1| hypothetical protein TRIADDRAFT_49657 [Trichoplax adhaerens]
gi|190588674|gb|EDV28696.1| hypothetical protein TRIADDRAFT_49657 [Trichoplax adhaerens]
Length = 254
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI 59
++++ + + GIGG+ L+++ + N + + +IN + Y+ NF NT +I KI
Sbjct: 8 VMQVVEFYSGIGGMHYALQES--NINAKILAAIDINTVANNVYRHNFGNTPVWQREIGKI 65
Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83
+++ + D+ PCQPF++ G
Sbjct: 66 SLKELQELNGDLYTMSPPCQPFTRLG 91
>gi|254825117|ref|ZP_05230118.1| DNA-cytosine methyltransferase [Listeria monocytogenes FSL
J1-194]
gi|293594360|gb|EFG02121.1| DNA-cytosine methyltransferase [Listeria monocytogenes FSL
J1-194]
Length = 326
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LKI +LF GIG R L + EI+ +V+ Y A + T+ +
Sbjct: 4 LKILELFGGIGAPRKALINLGIE--HKSIDYVEIDEKAVRAYNALYDKTIQPQSVVGYNL 61
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D+L+ G PCQ FS+AG
Sbjct: 62 ----RPDLLIHGSPCQDFSRAG 79
>gi|328947611|ref|YP_004364948.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM
2489]
gi|328447935|gb|AEB13651.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM
2489]
Length = 391
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60
D F G GGI L E + E V TY N P + DI +
Sbjct: 3 FTHIDCFSGPGGICTGLHAA----GFETKVAIEFIKSCVDTYSKNHPEVHVIHSDIRNVS 58
Query: 61 TQDI------PDHDVLLAGFPCQPFSQAG 83
+ I D++ +G PC+ FS AG
Sbjct: 59 KEQILPFIPKGGIDLVTSGMPCETFSTAG 87
>gi|291536942|emb|CBL10054.1| Site-specific DNA methylase [Roseburia intestinalis M50/1]
Length = 840
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 29/98 (29%), Gaps = 21/98 (21%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-----------INP------YSVKTYQ 44
L LF G ++ EC ++E + Y
Sbjct: 7 LTYISLFSCAGVGCFGFKKA----GFECIATNELIERRINVQKFNDKCKFDSGYICDDIT 62
Query: 45 ANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
IF +I K + DVL+A PCQ S A
Sbjct: 63 TEETKNKIFAEIKKWEKMGNDKVDVLIATPPCQGMSVA 100
>gi|256078707|ref|XP_002575636.1| DNA (cytosine-5)-methyltransferase [Schistosoma mansoni]
gi|238660878|emb|CAZ31869.1| DNA (cytosine-5)-methyltransferase, putative [Schistosoma
mansoni]
Length = 368
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ +L+ GIGG+ + +++ E + EIN + Y+ NFPNTL + + +
Sbjct: 1 MRVLELYSGIGGMHIAFKES--TVKHEVVAAVEINGVATDVYKYNFPNTLTLNRVIESFS 58
Query: 62 QDIPDH---DVLLAGFPCQPFSQAG 83
D +V PCQPF++ G
Sbjct: 59 PDYVCSLNANVWSLCPPCQPFTRLG 83
>gi|332878260|ref|ZP_08445986.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332683711|gb|EGJ56582.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 424
Score = 58.0 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 33/130 (25%), Gaps = 52/130 (40%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L DLF G GG+ Q E++ ++ T + + + K
Sbjct: 6 LNFIDLFAGAGGLSEGFVQA----GYIPIAHIEMDRHACDTLKTRAAFHWLKANNQLHKY 61
Query: 62 QDI------------------------------------------------PDHDVLLAG 73
++ D+++ G
Sbjct: 62 KEYLYKKQEKEDGSKLWAQVPEEVINSVIQSEIGENTILNLFKQVDSLIKDKKIDLIIGG 121
Query: 74 FPCQPFSQAG 83
PCQ +S AG
Sbjct: 122 PPCQAYSIAG 131
>gi|303233873|ref|ZP_07320524.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna BVS033A4]
gi|302495017|gb|EFL54772.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna BVS033A4]
Length = 315
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI + F GIG IR E EI+ VK+Y A + + K
Sbjct: 5 KILEFFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNALYGEDYKPKSVVAYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 NEKI-DLVMHGSPCQDFSRIG 82
>gi|113461565|ref|YP_719634.1| DNA-cytosine methyltransferase [Haemophilus somnus 129PT]
gi|112823608|gb|ABI25697.1| DNA-cytosine methyltransferase [Haemophilus somnus 129PT]
Length = 365
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--- 57
M + GI + + + +EI P+ +P GD+
Sbjct: 1 MFTYGSICSGI----EAASVAWQGLG-KPLWFAEIEPFPSALLAYRYPEIPNLGDMTALP 55
Query: 58 -KIKTQDIPDHDVLLAGFPCQPFSQAG 83
KI ++I DVL+ G PCQ FS AG
Sbjct: 56 EKILNREIKAPDVLVGGTPCQAFSVAG 82
>gi|293407987|ref|ZP_06651827.1| modification methylase NmeDIP [Escherichia coli B354]
gi|301328020|ref|ZP_07221181.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1]
gi|291472238|gb|EFF14720.1| modification methylase NmeDIP [Escherichia coli B354]
gi|300845467|gb|EFK73227.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1]
Length = 379
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 30/98 (30%), Gaps = 22/98 (22%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ F G G + L E + E F +E +P + Y+ + +
Sbjct: 8 VFSFFSGSGFLDLGFE----NSGYEVVFVNEFHPPFMDAYKHSRAVMNKPIPRFGYAEES 63
Query: 64 IPDHD------------------VLLAGFPCQPFSQAG 83
I + D + G PC FS AG
Sbjct: 64 IEEIDHKKLKDNIKALKKEKRLIGFIGGPPCPDFSVAG 101
>gi|91213886|ref|YP_543872.1| hypothetical protein UTI89_C4938 [Escherichia coli UTI89]
gi|110644679|ref|YP_672409.1| modification methylase [Escherichia coli 536]
gi|191170832|ref|ZP_03032384.1| modification methylase HgiDII [Escherichia coli F11]
gi|300974517|ref|ZP_07172633.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1]
gi|91075460|gb|ABE10341.1| hypothetical protein UTI89_C4938 [Escherichia coli UTI89]
gi|110346271|gb|ABG72508.1| modification methylase [Escherichia coli 536]
gi|190909056|gb|EDV68643.1| modification methylase HgiDII [Escherichia coli F11]
gi|300308872|gb|EFJ63392.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1]
gi|307629406|gb|ADN73710.1| DNA-cytosine methyltransferase [Escherichia coli UM146]
gi|315290903|gb|EFU50272.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 153-1]
gi|324010993|gb|EGB80212.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 60-1]
Length = 348
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 13/89 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52
+ + D FCG GG L Q + +I+ + +T++ANFP+
Sbjct: 1 MIVIDFFCGCGGASEGLRQA----GFDIELGLDIDQQASETFKANFPDAKFIQDDIRKIE 56
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
DI+ I +L A PCQPFSQ
Sbjct: 57 PQDISDIIDIKAKRPLLLSACAPCQPFSQ 85
>gi|228958671|ref|ZP_04120388.1| Prophage LambdaBa01, C-5 cytosine-specific DNA methylase
[Bacillus thuringiensis serovar pakistani str. T13001]
gi|228801009|gb|EEM47909.1| Prophage LambdaBa01, C-5 cytosine-specific DNA methylase
[Bacillus thuringiensis serovar pakistani str. T13001]
Length = 251
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ DL GI GI + + ++ EI ++ K + N+PN IF D+ K+
Sbjct: 1 MKMLDLCSGIAGISMAADWA----GIDTAAFCEIEEFNQKVLRKNYPNIPIFPDLYKLTK 56
Query: 62 Q-------DIPDHDVLLAGFPCQPFSQAG 83
Q D+ V+ AG+PCQ S AG
Sbjct: 57 QSLIDGGVDVDSIGVISAGYPCQGESMAG 85
>gi|52786706|ref|YP_092535.1| hypothetical protein BLi02974 [Bacillus licheniformis ATCC 14580]
gi|319647238|ref|ZP_08001460.1| hypothetical protein HMPREF1012_02499 [Bacillus sp. BT1B_CT2]
gi|52349208|gb|AAU41842.1| putative protein [Bacillus licheniformis ATCC 14580]
gi|317390585|gb|EFV71390.1| hypothetical protein HMPREF1012_02499 [Bacillus sp. BT1B_CT2]
Length = 256
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60
LK+ F GG + + + + EI+P +K Y+ N F DI
Sbjct: 21 LKVFSTFSWGGGSSMGYKLA----GYDLLGNCEIDPQMMKIYRKNHNPIYPFLMDIRDFN 76
Query: 61 TQDI-----PDHDVLLAGFPCQPFSQAG 83
+ D D+ PC FS AG
Sbjct: 77 KMENLPDELFDLDIFDGSPPCSVFSIAG 104
>gi|170719036|ref|YP_001784193.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336]
gi|168827165|gb|ACA32536.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336]
Length = 365
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--- 57
M + GI + + + +EI P+ +P GD+
Sbjct: 1 MFTYGSICSGI----EAASVAWQGLG-KPLWFAEIEPFPSALLAYRYPEIPNLGDMTALP 55
Query: 58 -KIKTQDIPDHDVLLAGFPCQPFSQAG 83
KI ++I DVL+ G PCQ FS AG
Sbjct: 56 EKILNREIKAPDVLVGGTPCQAFSVAG 82
>gi|296503162|ref|YP_003664862.1| type II restriction-modification system methylation subunit
[Bacillus thuringiensis BMB171]
gi|296324214|gb|ADH07142.1| Type II restriction-modification system methylation subunit
[Bacillus thuringiensis BMB171]
Length = 251
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ DL GI GI + + + EI ++ K + N+PN IF D+ K+
Sbjct: 1 MKMLDLCSGIAGISMAADWA----GINTAAFCEIEEFNQKVLRKNYPNIPIFPDLYKLTK 56
Query: 62 Q-------DIPDHDVLLAGFPCQPFSQAG 83
Q D+ V+ AG+PCQ S AG
Sbjct: 57 QSLIDGGVDVDSIGVISAGYPCQGESMAG 85
>gi|14601777|ref|NP_148318.1| cytosine-specific DNA methylase [Aeropyrum pernix K1]
gi|5105700|dbj|BAA81012.1| cytosine-specific DNA methylase [Aeropyrum pernix K1]
Length = 327
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 13/90 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53
D+F G GG E+ + + P + +TY+ANFP+T
Sbjct: 5 YTAADVFAGGGGFSRGFEEA----GFRVRVAIDNYPPAARTYKANFPHTAFIADDVKEVG 60
Query: 54 -GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+I+ + + DV++A PC+PF+ A
Sbjct: 61 LEEISSVSGLSPGEVDVVIASPPCEPFTGA 90
>gi|307330945|ref|ZP_07610077.1| DNA-cytosine methyltransferase [Streptomyces violaceusniger Tu
4113]
gi|306883406|gb|EFN14460.1| DNA-cytosine methyltransferase [Streptomyces violaceusniger Tu
4113]
Length = 386
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 15/93 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ G GG + L + EI+ ++ T ++N + +K
Sbjct: 8 FTSVEICAGAGGQAVGLHEA----GFRHLALIEIDEHACATLESNVTGNPEWDGCKVLKR 63
Query: 62 Q-----------DIPDHDVLLAGFPCQPFSQAG 83
+ D+L G PC PFS AG
Sbjct: 64 DLTEFKVDELGLKPGELDLLAGGVPCPPFSAAG 96
>gi|228950066|ref|ZP_04112251.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228809593|gb|EEM56029.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 445
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
++ +F G GG+ + + E++P + TY+ N P T DI +K
Sbjct: 13 YEVIGIFAGCGGLDTGFS----KSDFNVQLAIELDPDACNTYKKNHPETEVWNRDIKTVK 68
Query: 61 TQDI-----PDHDVLLAGFPCQPFSQ 81
+I +LL G PCQ FS
Sbjct: 69 GDEIRKLVGNKPLILLGGSPCQSFSI 94
>gi|134295263|ref|YP_001118998.1| C-5 cytosine-specific DNA methylase [Burkholderia vietnamiensis
G4]
gi|134138420|gb|ABO54163.1| C-5 cytosine-specific DNA methylase [Burkholderia vietnamiensis
G4]
Length = 232
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 12/89 (13%)
Query: 2 LKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-----SVKTYQANFPNTLIFG 54
+++ +LF G+GG L + E NPY + + + P I+
Sbjct: 1 MRVNELELFAGVGGGIL----AAKLLGHRTVCAVERNPYRIRRLMQRQNEGHLPPFPIWD 56
Query: 55 DIAKIKT-QDIPDHDVLLAGFPCQPFSQA 82
D+ D + GFPCQ +S A
Sbjct: 57 DVRTFDGLPWRGIVDCVSGGFPCQAYSSA 85
>gi|332970702|gb|EGK09683.1| DNA (cytosine-5-)-methyltransferase [Kingella kingae ATCC 23330]
Length = 197
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 10 GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDV 69
GI G L + E ++++ +PY+VK Y ANF + D+ I ++P+HD+
Sbjct: 4 GILGDFHYLGNHYAKLPFEIAYAADYDPYAVKIYNANFSHQAEIKDVRDIVAGELPEHDI 63
Query: 70 LLAGFPCQPFSQ 81
LL GFPCQ FS
Sbjct: 64 LLGGFPCQSFSI 75
>gi|134287405|ref|YP_001110788.1| putative cytosine-C5 specific DNA methylase [Clostridium phage
phiC2]
gi|93117243|gb|ABE99533.1| putative cytosine-C5 specific DNA methylase [Clostridium phage
phiC2]
Length = 316
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 23 NHRNVECFFSSEINPYSVKTYQANFPNT---LIFGDIAKIKTQDIPDHDVLLAGFPCQPF 79
+C E + ++ +Y A DI +I+T++IP DV GFPCQ
Sbjct: 2 EKAGHKCLGHCEYDKFANLSYNAMHKPKEDEWFERDIREIRTENIPRADVWCFGFPCQDI 61
Query: 80 SQAG 83
S AG
Sbjct: 62 SVAG 65
>gi|226305778|ref|YP_002765738.1| hypothetical protein RER_22910 [Rhodococcus erythropolis PR4]
gi|226184895|dbj|BAH32999.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 513
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
M+ +TDLFCG GG V ++ + + D++++
Sbjct: 1 MITMTDLFCGAGGSSTG---AVQVPGVSVRMAANHWDLAIETHNTNHPTTDHACADLSQV 57
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ P D+L A C SQA
Sbjct: 58 DPRLFPRTDLLWASPECTNHSQA 80
>gi|326469309|gb|EGD93318.1| hypothetical protein TESG_00865 [Trichophyton tonsurans CBS 112818]
Length = 584
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
D FCG GG+ +Q ++ ++ + ++ +Y+ANFP+ L
Sbjct: 278 YTFGDGFCGAGGVSRGAQQA----GLKLLWAFDKWESAINSYRANFPSCLAEHSEVAQFL 333
Query: 62 QDIPDH---DVLLAGFPCQPFSQA 82
+P DV+ PCQPFS A
Sbjct: 334 TSLPREILVDVIHVSPPCQPFSPA 357
>gi|302058959|ref|ZP_07250500.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
K40]
Length = 498
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
L+ + GI ++ +E + +EI P+ ++P T GD+ K
Sbjct: 10 LQYGSVCSGI----EAATAAWHPLGMEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGA 65
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I DVL+ G PCQ FS AG
Sbjct: 66 LVLAGKIDAPDVLVGGTPCQAFSVAG 91
>gi|78047901|ref|YP_364076.1| putative cytosine-specific DNA methylase [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|78036331|emb|CAJ24022.1| putative cytosine-specific DNA methylase [Xanthomonas campestris
pv. vesicatoria str. 85-10]
Length = 333
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKI 59
M + F G G + + + +C +++ +P + + L GD+A +
Sbjct: 1 MANFYEFFAGGG-----MARAGLGPDWQCLLANDFDPKKAASYAANWGTDHLRVGDVAAL 55
Query: 60 KTQDIPD-HDVLLAGFPCQPFSQAG 83
T D+P D+ A FPCQ S AG
Sbjct: 56 TTADLPAGADLAWASFPCQDLSLAG 80
>gi|323485262|ref|ZP_08090612.1| cytosine-specific methyltransferase [Clostridium symbiosum
WAL-14163]
gi|323401440|gb|EGA93788.1| cytosine-specific methyltransferase [Clostridium symbiosum
WAL-14163]
Length = 335
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+I +LF GIG R+ L V+ EI+ +V++Y A F + +
Sbjct: 7 LQILELFGGIGSPRVALRNIGVS--VKSIDYVEIDEKAVRSYNAMFEQESAYSPQTVVGW 64
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
P D+L+ G PCQ FS AG
Sbjct: 65 NLQP--DILIHGSPCQDFSIAG 84
>gi|313625252|gb|EFR95088.1| modification methylase Sau3AI [Listeria innocua FSL J1-023]
Length = 227
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 14/95 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPY-----------SVKTYQANF 47
L I +F G+GG + L +S++ P +
Sbjct: 3 LNIFSMFDGVGGFIVGLNDANEAIEKEMFRTTYSNQFEPSKKAQDAYEVGVYRFPKMNHI 62
Query: 48 PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
P+ ++ K + ++++ GFPCQ +S A
Sbjct: 63 PDDIMTVSDNKFQEMHDAGVNMIVGGFPCQDYSVA 97
>gi|2129405|pir||S53867 DNA (cytosine)-methyltransferase (EC 2.1.1.-) Dcm5a -
Halobacterium salinarum
gi|732794|emb|CAA56444.1| cytosine methylase [Halobacterium phage phiH]
Length = 245
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 28/88 (31%), Gaps = 9/88 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF------FSSEINPYSVKTYQANFPNTLIFGDIA 57
+ DLF G GG+ + + N+E + P + + I
Sbjct: 8 VVDLFAGAGGLSTGVAKACEDLNLEPGEDLELHAVNHWKPAIRTHEENHGWANHYHARIE 67
Query: 58 KIKTQ---DIPDHDVLLAGFPCQPFSQA 82
++ D +L G C FS A
Sbjct: 68 ELYPPNVVDPGSVTLLTGGPECTHFSNA 95
>gi|198416008|ref|XP_002122948.1| PREDICTED: Zn-finger (CXXC)-5 [Ciona intestinalis]
Length = 1305
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 31/95 (32%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIK 60
L+ D+F G GG+ Q E ++ E P + N T+ D +
Sbjct: 843 LRSLDVFSGCGGLSEGFHQAGIA---EPSYAIELWEPAAQAYRLNNPGATVFTEDCNVLL 899
Query: 61 TQ---------------DIPDHDVLLAGFPCQPFS 80
D ++L G PCQ FS
Sbjct: 900 EMVMNGEERSKCGQRLPQKGDVELLCGGPPCQGFS 934
>gi|148658198|ref|YP_001278403.1| DNA-cytosine methyltransferase [Roseiflexus sp. RS-1]
gi|148570308|gb|ABQ92453.1| DNA-cytosine methyltransferase [Roseiflexus sp. RS-1]
Length = 395
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59
L + F G G R L R C F+++I+ + YQ NF ++ DI I
Sbjct: 4 LTFYEFFAGGGLARFGL-----GRQWTCLFANDIDEKKAEVYQRNFSGAPEMVVEDIRHI 58
Query: 60 KTQDIPDHDVL-LAGFPCQPFSQAG 83
T +P L A FPCQ S AG
Sbjct: 59 TTAMLPGRATLAWASFPCQDLSLAG 83
>gi|297812763|ref|XP_002874265.1| DNA methyltransferase-2 [Arabidopsis lyrata subsp. lyrata]
gi|297320102|gb|EFH50524.1| DNA methyltransferase-2 [Arabidopsis lyrata subsp. lyrata]
Length = 383
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ + + GIGG+R L + E + EIN + YQ NF + G+I +
Sbjct: 16 RVLEFYSGIGGMRYSLMASGVVA--EVVEAFEINDSANDVYQHNFKHRPYQGNIQSLTAV 73
Query: 63 --DIPDHDVLLAGFPCQPFSQAG 83
D + D L PCQP+++ G
Sbjct: 74 DLDKYNADAWLLSPPCQPYTRQG 96
>gi|197106819|ref|YP_002132196.1| DNA-cytosine methyltransferase [Phenylobacterium zucineum HLK1]
gi|196480239|gb|ACG79767.1| DNA-cytosine methyltransferase [Phenylobacterium zucineum HLK1]
Length = 375
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAK 58
+ F G G RL L C F+++ +P TY+ANFP+ GD+ K
Sbjct: 6 FSFYEFFAGGGMARLGL-----GARWACAFANDFDPVKAATYRANFPDAESHFREGDVWK 60
Query: 59 IKTQDIP-DHDVLLAGFPCQPFSQAG 83
+ D+P D+ A PCQ FS AG
Sbjct: 61 LGPVDLPGRADLAWASSPCQDFSLAG 86
>gi|145218897|ref|YP_001129606.1| DNA-cytosine methyltransferase [Prosthecochloris vibrioformis DSM
265]
gi|145205061|gb|ABP36104.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265]
Length = 467
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 37/121 (30%), Gaps = 43/121 (35%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49
DLF G GG+ L LE F +E+N ++ TY N +
Sbjct: 22 YSAMDLFAGCGGLSLGLENA----GFTPIFVNELNEDALATYLMNRHHTLGGLKFSDNAN 77
Query: 50 ----------------------TLIFGDIAKIKTQDIPDH-----DVLLAGFPCQPFSQA 82
+ +I+ + + D++ G PCQ FS
Sbjct: 78 LRCNDAHELDNNRLARLKSDLENIPEANISFNNPKTPKNGGGGTLDIIAGGPPCQGFSGI 137
Query: 83 G 83
G
Sbjct: 138 G 138
>gi|296814510|ref|XP_002847592.1| site-specific DNA-methyltransferase HphI [Arthroderma otae CBS
113480]
gi|238840617|gb|EEQ30279.1| site-specific DNA-methyltransferase HphI [Arthroderma otae CBS
113480]
Length = 586
Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAK 58
D FCG GG+ +Q ++ ++ + +P ++ +Y+ANFP+
Sbjct: 294 YTFGDGFCGAGGVSRGAQQA----GLKLTWAFDHSPSAMNSYRANFPSSLAETSDVADFL 349
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQA 82
+ DVL A PCQPFS A
Sbjct: 350 TNSIWDIIVDVLHASPPCQPFSPA 373
>gi|149210133|ref|XP_001522441.1| hypothetical protein MGCH7_ch7g548 [Magnaporthe oryzae 70-15]
gi|86196503|gb|EAQ71141.1| hypothetical protein MGCH7_ch7g548 [Magnaporthe oryzae 70-15]
Length = 877
Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 6/81 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIA-KIKT 61
D+FCG GG ++ E N + L GDI ++
Sbjct: 455 FGDMFCGAGGASQGARAA----GFRLGYAVEHWNHAAATYRHNFPEVNLFEGDIFDFLQR 510
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
D+ D+L PCQ +S A
Sbjct: 511 NDLDFVDILHLSPPCQYWSPA 531
>gi|320588321|gb|EFX00790.1| DNA methyltransferase dim-2 [Grosmannia clavigera kw1407]
Length = 1168
Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 18/95 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
L+ DLFCG G + LE VE ++++I ++ T AN
Sbjct: 653 LRALDLFCGCGSLGRGLEDAGV---VETRWANDIWDRAIHTLMANRATADAVEPFLGSAD 709
Query: 57 ----------AKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ D++ G PCQ FS
Sbjct: 710 ELLARALQGRYSRAVPAPGEVDLISGGSPCQGFSV 744
>gi|145610006|ref|XP_366719.2| hypothetical protein MGG_02795 [Magnaporthe oryzae 70-15]
gi|145017391|gb|EDK01754.1| hypothetical protein MGG_02795 [Magnaporthe oryzae 70-15]
Length = 892
Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 6/81 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIA-KIKT 61
D+FCG GG ++ E N + L GDI ++
Sbjct: 470 FGDMFCGAGGASQGARAA----GFRLGYAVEHWNHAAATYRHNFPEVNLFEGDIFDFLQR 525
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
D+ D+L PCQ +S A
Sbjct: 526 NDLDFVDILHLSPPCQYWSPA 546
>gi|261736049|ref|YP_003257391.1| putative 5-methylcytosine methyltransferase [Streptomyces sp.
ZL12]
gi|261349172|gb|ACX71104.1| putative 5-methylcytosine methyltransferase [Streptomyces sp.
ZL12]
Length = 348
Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I DLF G GG + + E + + +T +A T+ D+ D
Sbjct: 2 ILDLFAGPGGWDVAATRLGLD-----VIGIEHDHSACETRRAAGLATIEG-DVRSYGVAD 55
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
P L+ PCQ FS AG
Sbjct: 56 FPAAQRLIGSPPCQSFSVAG 75
>gi|71361889|gb|AAZ30053.1| C5-cytosine methyltransferase [Halorubrum saccharovorum]
Length = 408
Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 35/112 (31%), Gaps = 38/112 (33%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------------ 50
K+ DLFCG GG L Q E + + ++ TYQ N
Sbjct: 5 KVVDLFCGAGGASLGFVQA----GYEVVGAVDAYERALNTYQKNLCQRSLDEYSGSVSFD 60
Query: 51 ----------------------LIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
+ F DI + + D DV+ PCQ FS
Sbjct: 61 APLQADLSRGYEDNDVDNELPTVTFEDIREEFDLEKGDIDVICGCPPCQNFS 112
>gi|229066883|ref|ZP_04201078.1| Prophage LambdaBa01, C-5 cytosine-specific DNA methylase
[Bacillus cereus AH603]
gi|228715383|gb|EEL67217.1| Prophage LambdaBa01, C-5 cytosine-specific DNA methylase
[Bacillus cereus AH603]
Length = 251
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ DL GI GI + + +E EI ++ K + N+PN IF D+ K+
Sbjct: 1 MKMLDLCSGIAGISMAADWA----GIETAAFCEIEEFNQKVLRKNYPNIPIFPDLYKLAK 56
Query: 62 Q-------DIPDHDVLLAGFPCQPFSQAG 83
Q D+ V+ AG+PCQ S G
Sbjct: 57 QSLIDGGVDVDSIGVISAGYPCQGESLVG 85
>gi|313683546|ref|YP_004061284.1| DNA-cytosine methyltransferase [Sulfuricurvum kujiense DSM 16994]
gi|313156406|gb|ADR35084.1| DNA-cytosine methyltransferase [Sulfuricurvum kujiense DSM 16994]
Length = 332
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
L +L G GG L L + EI Y+ T + N + +
Sbjct: 5 LTSIELCAGAGGQALGLHLA----GFKHRLLIEIENYACNTLRMNNKLHALGWEEIIEGD 60
Query: 56 ---IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
AK + + D++ G PC PFS+AG
Sbjct: 61 LLEFAKSDLSNYSNIDLVAGGVPCPPFSKAG 91
>gi|83309461|ref|YP_419725.1| site-specific DNA methylase [Magnetospirillum magneticum AMB-1]
gi|82944302|dbj|BAE49166.1| Site-specific DNA methylase [Magnetospirillum magneticum AMB-1]
Length = 517
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 5/81 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ GI + F +EI P+ ++P GD+ I +
Sbjct: 27 YGSVCSGI----EAATVAWEPLGWRPAFFAEIEPFPSAVLAHHYPAVPNLGDMTAIDGRA 82
Query: 64 I-PDHDVLLAGFPCQPFSQAG 83
DVL+ G PCQ FS AG
Sbjct: 83 WRGKIDVLVGGTPCQAFSVAG 103
>gi|321469202|gb|EFX80183.1| hypothetical protein DAPPUDRAFT_346987 [Daphnia pulex]
Length = 1400
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 18/94 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK D+F G GG+ L Q+ + +++ E P + + ++ N P+ +F D
Sbjct: 926 LKTLDIFAGCGGLSEGLHQSGVA---KTYWAIECEPTAAQAFRLNNPDAAVFTDDCNTIL 982
Query: 62 QDI------------PDHD---VLLAGFPCQPFS 80
+ P D +L G PCQ FS
Sbjct: 983 KMAIDGQLEQNGQVLPPKDGVELLCGGPPCQGFS 1016
>gi|297618103|ref|YP_003703262.1| DNA-cytosine methyltransferase [Syntrophothermus lipocalidus DSM
12680]
gi|297145940|gb|ADI02697.1| DNA-cytosine methyltransferase [Syntrophothermus lipocalidus DSM
12680]
Length = 388
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 36/100 (36%), Gaps = 25/100 (25%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK-------------TYQANFPNTL 51
+F G GG L +E E ++I+ +S + + +
Sbjct: 8 ISIFSGAGGFDLGIEAA----GFETRLCTDIDYHSCRTLRSNRRLGKETGKHSFLQNAVV 63
Query: 52 IFGDIAKIKTQD--------IPDHDVLLAGFPCQPFSQAG 83
+ DI K+ T+D +++ G PCQ FS G
Sbjct: 64 LQRDIRKLNTKDILRAARLDRGKVSLVIGGPPCQSFSVFG 103
>gi|222149028|ref|YP_002549985.1| DNA methylase [Agrobacterium vitis S4]
gi|221736013|gb|ACM36976.1| DNA methylase [Agrobacterium vitis S4]
Length = 492
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 22/100 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ +L G GG+ L L ++ E +P + TY NF K
Sbjct: 19 LRVLELCSGCGGMSLGLHAA----GLQLVGHVEQDPTASATYARNFLPPEDVDAGQWQKP 74
Query: 62 QDI------------------PDHDVLLAGFPCQPFSQAG 83
+D+ DVL AG PCQ F++ G
Sbjct: 75 RDMVECSPEELAKDLGLPDASGAFDVLAAGLPCQAFARIG 114
>gi|209883965|ref|YP_002287822.1| site-specific DNA methylase [Oligotropha carboxidovorans OM5]
gi|209872161|gb|ACI91957.1| site-specific DNA methylase [Oligotropha carboxidovorans OM5]
Length = 358
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV-----KTYQANFPNTLIFGDIAKI 59
L G GG+ L + E + Y+ + A + ++ DIA
Sbjct: 23 LSLCSGAGGLDLGVAIACPE--YRAMGYVERDAYAAAILVARMEDAALDHAPVWDDIATF 80
Query: 60 KTQDI-PDHDVLLAGFPCQPFSQAG 83
+ D++ AG+PCQPFS AG
Sbjct: 81 DGRPWRGTIDIVTAGYPCQPFSVAG 105
>gi|116748761|ref|YP_845448.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB]
gi|116697825|gb|ABK17013.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB]
Length = 429
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSE------INPYSVKTYQANFPNTLIFGDIAK 58
LF G GG+ L LE ++ + + +N K + + + +I +
Sbjct: 26 ISLFTGAGGLDLGLEAAGFCISICVEVAKDAQETLKVNRPHWKLAEPGHIHQISPPEILE 85
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQ 81
+ +L G PCQPFS+
Sbjct: 86 QSNLRRGELALLSGGPPCQPFSK 108
>gi|323178455|gb|EFZ64033.1| modification methylase NgoMIV [Escherichia coli 1180]
Length = 377
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV---------KTYQANFPNTLI 52
++ G GG L L EI+P + +
Sbjct: 4 YTSVEICAGAGGQALGLHNA----GFTHRALVEIDPAACETLRLNNELHSLGWENIIEGC 59
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
A+ + D D++ G PC PFS+AG
Sbjct: 60 VKHFAEHTAYNFSDIDLVAGGVPCPPFSKAG 90
>gi|21225136|ref|NP_630915.1| DNA methylase [Streptomyces coelicolor A3(2)]
gi|6900913|emb|CAB71857.1| putative DNA methylase [Streptomyces coelicolor A3(2)]
Length = 423
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 28/80 (35%), Gaps = 5/80 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I DLF G GG + E + ++ KT A T+
Sbjct: 2 ILDLFAGPGGWSRAVHVLGMRD-----IGLEWDQWACKTRAAAGQLTIRCDVARYPAWPF 56
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
I ++A PCQ +S AG
Sbjct: 57 IGRTRGVIASPPCQAWSMAG 76
>gi|296206220|ref|XP_002750112.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase isoform 1
[Callithrix jacchus]
Length = 391
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI- 59
L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYRFNFPHTQLLAKTIEGIT 61
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D D++L PCQPF++ G
Sbjct: 62 LQEFDRLSFDMILMSPPCQPFTRIG 86
>gi|306835815|ref|ZP_07468812.1| modification methylase NaeI [Corynebacterium accolens ATCC 49726]
gi|304568289|gb|EFM43857.1| modification methylase NaeI [Corynebacterium accolens ATCC 49726]
Length = 345
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L ++ G GG L LE E++ ++ +T + N ++ G ++
Sbjct: 6 LTSLEICAGAGGQALGLETA----GFTHKAVIEVDQWAAQTLRLNRGDSGPHGKWNVLEM 61
Query: 62 --------QDIPDHDVLLAGFPCQPFSQAG 83
D+ G PC PFS AG
Sbjct: 62 DVHDFDGKPWRHKIDLFAGGVPCPPFSIAG 91
>gi|111656823|ref|ZP_01407675.1| hypothetical protein SpneT_02001911 [Streptococcus pneumoniae
TIGR4]
gi|148994722|ref|ZP_01823806.1| type II DNA modification methyltransferase Spn5252IP
[Streptococcus pneumoniae SP9-BS68]
gi|148999034|ref|ZP_01826467.1| type II DNA modification methyltransferase Spn5252IP
[Streptococcus pneumoniae SP11-BS70]
gi|307067986|ref|YP_003876952.1| site-specific DNA methylase [Streptococcus pneumoniae AP200]
gi|147755157|gb|EDK62211.1| type II DNA modification methyltransferase Spn5252IP
[Streptococcus pneumoniae SP11-BS70]
gi|147927053|gb|EDK78094.1| type II DNA modification methyltransferase Spn5252IP
[Streptococcus pneumoniae SP9-BS68]
gi|306409523|gb|ADM84950.1| Site-specific DNA methylase [Streptococcus pneumoniae AP200]
gi|332074668|gb|EGI85142.1| modification methylase HpaII [Streptococcus pneumoniae GA17545]
gi|332200781|gb|EGJ14853.1| modification methylase HpaII [Streptococcus pneumoniae GA41317]
gi|332201799|gb|EGJ15869.1| modification methylase HpaII [Streptococcus pneumoniae GA47368]
Length = 392
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 20 QTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKIKTQDIPD----HDVLLAG 73
+ EC EI+ ++ K+Y + F DI + + DV+ G
Sbjct: 1 MGMEAQGHECLGFCEIDKFARKSYKSIFQTEGEIEFHDIRDVSDDEFKKLRGKVDVICGG 60
Query: 74 FPCQPFSQAG 83
FPCQ FS AG
Sbjct: 61 FPCQAFSIAG 70
>gi|194765989|ref|XP_001965107.1| GF21561 [Drosophila ananassae]
gi|190617717|gb|EDV33241.1| GF21561 [Drosophila ananassae]
Length = 334
Score = 57.3 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
++ +LF GIGG+ + E + ++N + T+ +I +
Sbjct: 3 FRVLELFSGIGGMHYAFQCAQLE--GEVVGAMDVNTVANAVYAHNFGQKTVKTRNIQSLT 60
Query: 61 TQDIP--DHDVLLAGFPCQPFSQAG 83
+++ + +++L PCQP ++ G
Sbjct: 61 EKEVTKVNANMILMSPPCQPHTRQG 85
>gi|320101441|ref|YP_004177033.1| DNA-cytosine methyltransferase [Desulfurococcus mucosus DSM 2162]
gi|319753793|gb|ADV65551.1| DNA-cytosine methyltransferase [Desulfurococcus mucosus DSM 2162]
Length = 323
Score = 57.3 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 10/89 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI 59
+ K D+F G GG L + + + + P + ++ D+ +
Sbjct: 4 VYKYIDVFSGAGGFSLGFHLSGR---FKSLLAVDSFKPAAETYKANFPHTLVVNEDVKDL 60
Query: 60 KTQ------DIPDHDVLLAGFPCQPFSQA 82
+ + DV++ PC+PF+ A
Sbjct: 61 TGEILTGLVKPDEVDVVIGSPPCEPFTGA 89
>gi|188991808|ref|YP_001903818.1| hypothetical protein xccb100_2413 [Xanthomonas campestris pv.
campestris str. B100]
gi|167733568|emb|CAP51773.1| hypothetical protein predicted by Glimmer/Critica [Xanthomonas
campestris pv. campestris]
Length = 271
Score = 57.3 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKI 59
+ GI + + +E + +EI P+ Y + ++
Sbjct: 11 YGSVCSGI----EAVSLAWQPLGIEAAWFAEIEPFPSAVLAHHYPHVPNLGDMTMIARQV 66
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+P D+L+ G PCQ FS AG
Sbjct: 67 HAGTVPAPDILVGGTPCQSFSVAG 90
>gi|156055406|ref|XP_001593627.1| hypothetical protein SS1G_05055 [Sclerotinia sclerotiorum 1980]
gi|154702839|gb|EDO02578.1| hypothetical protein SS1G_05055 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1126
Score = 57.3 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 32/93 (34%), Gaps = 16/93 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKI 59
L D FCG GG + + + +P++ T++ NFP +
Sbjct: 722 LTYGDAFCGAGGTTRGAVMA----GLRVKWGFDFDPHACTTWRLNFPYATCYEMSSDRFV 777
Query: 60 ----------KTQDIPDHDVLLAGFPCQPFSQA 82
T + D+L PCQ FS A
Sbjct: 778 ALATPSPYSSFTPNDVKVDILHLSPPCQYFSPA 810
>gi|328698549|ref|XP_003240668.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like
[Acyrthosiphon pisum]
Length = 346
Score = 57.3 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
L++ LF GIG L + +E ++SEI+ ++ + +F + + +I
Sbjct: 60 LRVLSLFDGIGTGYYALLKLGFD--IEVIYASEIDKDALMVTKYHFSDNIKQLGSVTEIT 117
Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80
I ++L G PC S
Sbjct: 118 TKMLDQIAPINLLFGGSPCSDLS 140
>gi|288573115|ref|ZP_06391472.1| DNA-cytosine methyltransferase [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288568856|gb|EFC90413.1| DNA-cytosine methyltransferase [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 350
Score = 57.3 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 11/86 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60
+ + DLFCG GG+ + + ++ N I D+ +
Sbjct: 5 ISVVDLFCGAGGLTHGFVM----EGFRVLAGVDTDKACKYPFEKNNAGAEFIASDVRDLS 60
Query: 61 TQD------IPDHDVLLAGFPCQPFS 80
+D D VL+ PCQPFS
Sbjct: 61 PEDLAKLYPEGDMKVLVGCAPCQPFS 86
>gi|157691352|ref|YP_001485814.1| DNA (cytosine-5-)-methyltransferase [Bacillus pumilus SAFR-032]
gi|157680110|gb|ABV61254.1| possible DNA (cytosine-5-)-methyltransferase [Bacillus pumilus
SAFR-032]
Length = 261
Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 13/90 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK-- 60
+ +LF GIGGI L E +E E N + K NFP +F D+ K+
Sbjct: 11 RSIELFAGIGGIALAAEMA----GIEVMVFCEQNDFCRKVLNKNFPGVPVFNDVKKLNRE 66
Query: 61 -------TQDIPDHDVLLAGFPCQPFSQAG 83
D++ G+PCQ S G
Sbjct: 67 LLEEEGLINRNESIDIISGGYPCQGESVIG 96
>gi|296232860|ref|XP_002807840.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Callithrix jacchus]
Length = 1678
Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+F G GG+ Q E ++ E +P + N +T+ D +
Sbjct: 1201 LRTLDVFSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLL 1257
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D + L G PCQ FS
Sbjct: 1258 KLVMAGETTNSRGQRLPQKGDVETLCGGQPCQGFS 1292
>gi|255946093|ref|XP_002563814.1| Pc20g13340 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588549|emb|CAP86663.1| Pc20g13340 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 627
Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
D +CG GG+ +Q ++ ++ +I+ ++++TYQ NF + +
Sbjct: 321 YTFGDAYCGAGGVSCGAKQA----GLKLQWAVDIDKHALETYQLNFDDVEVEHSDFFSFL 376
Query: 62 QDIPDH---DVLLAGFPCQPFSQA 82
+ P D+ PCQ +S A
Sbjct: 377 TNDPRFLRVDIAHCSPPCQTWSPA 400
>gi|226228975|ref|YP_002763081.1| putative DNA methyltransferase [Gemmatimonas aurantiaca T-27]
gi|226092166|dbj|BAH40611.1| putative DNA methyltransferase [Gemmatimonas aurantiaca T-27]
Length = 407
Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 27/97 (27%), Gaps = 18/97 (18%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEI-NPYSVKTYQANFPNTLIFGDIAKI 59
++ DLF G G + L + + + + + I + I
Sbjct: 64 RVVDLFSGCGAMSLGIWEASRAIGARMVPVMALDFNDKALRVYEDNFPNVWAISKPVESI 123
Query: 60 KT---------------QDIPDHDVLLAGFPCQPFSQ 81
+ DVL+ G PCQ S
Sbjct: 124 LDGALGAPASPAERDLVARLGHVDVLIGGPPCQGHSN 160
>gi|114629608|ref|XP_001151654.1| PREDICTED: DNA methyltransferase 2 isoform 1 [Pan troglodytes]
Length = 377
Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 61 --TQDIPDHDVLLAGFPCQPFSQAG 83
D D++L PCQPF++ G
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIG 86
>gi|74317828|ref|YP_315568.1| C-5 cytosine-specific DNA methylase [Thiobacillus denitrificans
ATCC 25259]
gi|74057323|gb|AAZ97763.1| C-5 cytosine-specific DNA methylase [Thiobacillus denitrificans
ATCC 25259]
Length = 382
Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKI 59
M + F G GG+ + +C F+++ +P + + L GD+ +
Sbjct: 1 MPSFYEFFAG-GGMA----RAGLGAEWDCLFANDFDPKKAASYAVNWDGDELRVGDVGTL 55
Query: 60 KTQDIP-DHDVLLAGFPCQPFSQAG 83
D+P D+ A FPCQ S AG
Sbjct: 56 TVPDLPGRADLAWASFPCQDLSLAG 80
>gi|114629600|ref|XP_001151907.1| PREDICTED: DNA methyltransferase 2 isoform 5 [Pan troglodytes]
gi|332833684|ref|XP_001151840.2| PREDICTED: tRNA (cytosine-5-)-methyltransferase isoform 4 [Pan
troglodytes]
gi|29126973|gb|AAH47733.1| TRNA aspartic acid methyltransferase 1 [Homo sapiens]
Length = 391
Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 61 --TQDIPDHDVLLAGFPCQPFSQAG 83
D D++L PCQPF++ G
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIG 86
>gi|2895945|gb|AAC39764.1| putative DNA cytosine methyltransferase DNMT2 [Homo sapiens]
Length = 391
Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 61 --TQDIPDHDVLLAGFPCQPFSQAG 83
D D++L PCQPF++ G
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIG 86
>gi|13096616|pdb|1G55|A Chain A, Structure Of Human Dnmt2, An Enigmatic Dna
Methyltransferase Homologue
Length = 343
Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I
Sbjct: 3 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 60
Query: 61 --TQDIPDHDVLLAGFPCQPFSQAG 83
D D++L PCQPF++ G
Sbjct: 61 LEEFDRLSFDMILMSPPCQPFTRIG 85
>gi|4758184|ref|NP_004403.1| tRNA (cytosine-5-)-methyltransferase [Homo sapiens]
gi|17374834|sp|O14717|TRDMT_HUMAN RecName: Full=tRNA (cytosine-5-)-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2; AltName: Full=DNA methyltransferase
homolog HsaIIP; Short=DNA MTase homolog HsaIIP;
Short=M.HsaIIP; AltName: Full=PuMet
gi|2627431|gb|AAC51939.1| putative DNA methyltransferase [Homo sapiens]
gi|2894544|emb|CAA11272.1| DNA methyltransferase [Homo sapiens]
gi|7576230|emb|CAB87964.1| tRNA aspartic acid methyltransferase 1 [Homo sapiens]
gi|47496579|emb|CAG29312.1| DNMT2 [Homo sapiens]
gi|119606623|gb|EAW86217.1| hCG23994, isoform CRA_a [Homo sapiens]
gi|158256270|dbj|BAF84106.1| unnamed protein product [Homo sapiens]
gi|167887559|gb|ACA05983.1| tRNA aspartic acid methyltransferase 1 variant 3 [Homo sapiens]
gi|167887563|gb|ACA05987.1| tRNA aspartic acid methyltransferase 1 variant 4 [Homo sapiens]
Length = 391
Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 61 --TQDIPDHDVLLAGFPCQPFSQAG 83
D D++L PCQPF++ G
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIG 86
>gi|295691449|ref|YP_003595142.1| DNA-cytosine methyltransferase [Caulobacter segnis ATCC 21756]
gi|295433352|gb|ADG12524.1| DNA-cytosine methyltransferase [Caulobacter segnis ATCC 21756]
Length = 374
Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---PNTLIFGDIAKI 59
+ F G G R+ L C F+++ +P TY+ANF GD+ +
Sbjct: 8 TFLEFFAGGGMARIGL-----GNGWTCAFANDFDPVKAATYRANFGADEGHFQQGDVFAL 62
Query: 60 KTQDIPDHDVLLAGFPCQPFS 80
+ +P D+ A PCQ FS
Sbjct: 63 SAETLPTADLAWASSPCQDFS 83
>gi|269219712|ref|ZP_06163566.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. oral taxon
848 str. F0332]
gi|269210954|gb|EEZ77294.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. oral taxon
848 str. F0332]
Length = 310
Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----IAKI 59
+ + F GIG R+ LE ++++ +P Y+A F + I KI
Sbjct: 14 VLEFFAGIGLARIGLEAA----GFRVTWANDFDPDKKAMYEAQFEDAGDHVFALGDIGKI 69
Query: 60 KTQDIPDHDVL-LAGFPCQPFSQAG 83
++P L A PC S AG
Sbjct: 70 TADELPRDAALAWASSPCTDLSLAG 94
>gi|254416815|ref|ZP_05030564.1| DNA-cytosine methyltransferase superfamily [Microcoleus
chthonoplastes PCC 7420]
gi|196176361|gb|EDX71376.1| DNA-cytosine methyltransferase superfamily [Microcoleus
chthonoplastes PCC 7420]
Length = 391
Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 36/98 (36%), Gaps = 23/98 (23%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---IFGDIAKIKT 61
LF G G+ L LE E + SVKT N P I I I T
Sbjct: 9 ISLFSGAFGLDLGLELA----GFHTVSVVEKDRDSVKTIALNRPYLHESAIPRAIETIST 64
Query: 62 QD----------------IPDHDVLLAGFPCQPFSQAG 83
QD + D+++ G PCQPFS AG
Sbjct: 65 QDLLLEGGRVLGKGRALRPNEVDLVVGGAPCQPFSTAG 102
>gi|228989002|ref|ZP_04149032.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228770724|gb|EEM19259.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 445
Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQ 62
+ +F G GG+ + + + E++P + TY+ N P T DI +K
Sbjct: 15 VIGIFAGCGGLDMGF----FECDFNVQLAIELDPDACNTYKKNHPETEVWNRDIKTVKGD 70
Query: 63 DIPDHD-----VLLAGFPCQPFSQ 81
+I +LL G PCQ FS
Sbjct: 71 EIRKQVGNKPLILLGGSPCQSFSI 94
>gi|303236370|ref|ZP_07322960.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN]
gi|302483428|gb|EFL46433.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN]
Length = 415
Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 30/107 (28%), Gaps = 31/107 (28%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--------- 55
+LF G GG+ + E Y +T + N +
Sbjct: 8 IELFAGCGGLLDGF---LQQGKYDTLACVEWEQYPCQTLENRLLNKWHHRNANNEVIRFD 64
Query: 56 -------IAKIKTQDIPDH------------DVLLAGFPCQPFSQAG 83
I + + D+++ G PCQ +S AG
Sbjct: 65 IQRTDELINGFDDSEYGKNEGLDKLIGGKKVDIIVGGPPCQAYSLAG 111
>gi|224092438|ref|XP_002309610.1| DNA methyltransferase [Populus trichocarpa]
gi|222855586|gb|EEE93133.1| DNA methyltransferase [Populus trichocarpa]
Length = 350
Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ + + GIGG+R L + + + + +IN + Y+ NF + G+I +
Sbjct: 3 RVLEFYSGIGGMRYSLMKAGVNA--KVVEAFDINDKANDVYEYNFGHRPYQGNIETLTAA 60
Query: 63 --DIPDHDVLLAGFPCQPFSQAG 83
D L PCQP+++ G
Sbjct: 61 DLDNYGAHTWLLSPPCQPYTRQG 83
>gi|219847398|ref|YP_002461831.1| DNA-cytosine methyltransferase [Chloroflexus aggregans DSM 9485]
gi|219541657|gb|ACL23395.1| DNA-cytosine methyltransferase [Chloroflexus aggregans DSM 9485]
Length = 392
Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAK 58
L + + F GIG +R+ L+ + F+++I+ + Y+A FP+ + DI
Sbjct: 8 LTVAEYFAGIGLVRMGLQ----SYGWKVIFANDISKKKFEMYKAFFPDAEAHYVTADIFD 63
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
I +P + FPC S AG
Sbjct: 64 IDPTVVPLTTLATCSFPCIDLSLAG 88
>gi|94995093|ref|YP_603191.1| Type II restriction-modification system methylation subunit
[Streptococcus pyogenes MGAS10750]
gi|94548601|gb|ABF38647.1| Type II restriction-modification system methylation subunit
[Streptococcus pyogenes MGAS10750]
Length = 321
Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y A + + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDRACVKSYNALYGEDYKPKSVVEYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PCQ FS+ G
Sbjct: 63 NAKI-DLVMHGSPCQDFSRIG 82
>gi|309790719|ref|ZP_07685269.1| site-specific DNA-methyltransferase [Oscillochloris trichoides
DG6]
gi|308227250|gb|EFO80928.1| site-specific DNA-methyltransferase [Oscillochloris trichoides
DG6]
Length = 368
Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ DLFCG+GG+ L + + +I+PY Y+ N T I D+A I
Sbjct: 17 IRGVDLFCGVGGLTHGL----IRQGLHITHGIDIDPYCRFPYENNNNATFIESDVANISG 72
Query: 62 QDIPDH------DVLLAGFPCQPFSQ 81
++ + +L PCQPFS
Sbjct: 73 SELENILGDAQLRLLAGCAPCQPFST 98
>gi|94990422|ref|YP_598522.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10270]
gi|94543930|gb|ABF33978.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10270]
Length = 110
Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL L ++ EC EI+ ++ ++Y + F DI ++
Sbjct: 4 MKFLDLFAGIGGFRLGL----INQCHECIGFCEIDKFARQSYKAIYETEGEIEFHDIRQV 59
Query: 60 KTQDI----PDHDVLLAGF 74
QD D++ GF
Sbjct: 60 TDQDFRQLRGQVDIICGGF 78
>gi|91773503|ref|YP_566195.1| DNA-cytosine methyltransferase [Methanococcoides burtonii DSM
6242]
gi|91712518|gb|ABE52445.1| DNA-cytosine methyltransferase [Methanococcoides burtonii DSM
6242]
Length = 569
Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 35/102 (34%), Gaps = 28/102 (27%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ D FCG GG Q E F+ +I + +T++ N PN F +
Sbjct: 5 FTVADFFCGAGGSSEGFRQA----GFEIVFALDIWNPARETHKLNHPNCAHF----GLDC 56
Query: 62 QDIPDHDVL-----------------LAGFPCQPFS---QAG 83
D D+L + PC FS +AG
Sbjct: 57 YKDKDGDILKIETTDIDDVIPDVDVIVGSPPCVSFSSSNRAG 98
>gi|302789792|ref|XP_002976664.1| hypothetical protein SELMODRAFT_105635 [Selaginella
moellendorffii]
gi|300155702|gb|EFJ22333.1| hypothetical protein SELMODRAFT_105635 [Selaginella
moellendorffii]
Length = 334
Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--I 59
L++ + + GIGG+R LE+ + EIN + Y+ NF + G+I + +
Sbjct: 8 LRVLEFYSGIGGLRFSLEEAKIDA--TVVEAFEINELANDVYERNFGHRPNQGNIQRLSV 65
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D + D L PCQP+++ G
Sbjct: 66 SDLDKYEADAWLLSPPCQPYTRQG 89
>gi|110799652|ref|YP_695464.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC 13124]
gi|110674299|gb|ABG83286.1| DNA-cytosine methyltransferase [Clostridium perfringens ATCC 13124]
Length = 446
Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 37/119 (31%), Gaps = 40/119 (33%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------------- 47
M DLF G GG+ + + + E++ +VKTY N
Sbjct: 1 MYTYIDLFAGPGGLCTGFKNA----GFKPLIAVEMSDNTVKTYARNHEAEVYSLQELLEN 56
Query: 48 -------------PNTLIFGDIAKIKT----------QDIPDHDVLLAGFPCQPFSQAG 83
LI GDI + DV+ G PC+ FS AG
Sbjct: 57 KGRLEEILNINTDNTCLIHGDIRLVDNDIIVEILQKKFKTNSVDVVAGGPPCESFSLAG 115
>gi|312901967|ref|ZP_07761229.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0470]
gi|311290903|gb|EFQ69459.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0470]
Length = 412
Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 32/127 (25%), Gaps = 49/127 (38%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52
+ I DLF G GG+ + E++ + + + +
Sbjct: 1 MNIIDLFSGCGGLTEGFRI----KQFNMVCHIEMDKDACNSLRTREAYQYMKEKKDLSMY 56
Query: 53 --------------------------FGDIAK----------IKTQDIPDHDVLLAGFPC 76
+I+ I D D ++ G PC
Sbjct: 57 NSYLLGKIQRDELYKSIPINLMNKIINCEISCSTINNLIKKIIDLSDGETIDGIIGGPPC 116
Query: 77 QPFSQAG 83
Q +S G
Sbjct: 117 QAYSTIG 123
>gi|318042684|ref|ZP_07974640.1| DNA-cytosine methyltransferase [Synechococcus sp. CB0101]
Length = 361
Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 12/88 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + F G GG+ L LE+ + ++ + + SV T+ N D ++ +
Sbjct: 4 LTCIESFSGPGGMSLGLERA----GFQLLYAFDNDAPSVVTHNLNLNGKCFQLDARQVDS 59
Query: 62 QD--------IPDHDVLLAGFPCQPFSQ 81
+ + D D+ G PCQ FS+
Sbjct: 60 VELLAQCGLSVGDLDLFSGGPPCQGFSK 87
>gi|221232312|ref|YP_002511465.1| DNA methylase [Streptococcus pneumoniae ATCC 700669]
gi|220674773|emb|CAR69346.1| putative DNA methylase [Streptococcus pneumoniae ATCC 700669]
Length = 369
Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 23 NHRNVECFFSSEINPYSVKTYQANFPNT-----LIFGDIAKIKTQDIPDHDVLLAGFPCQ 77
EC EI+ ++ +Y+A ++ + I DV+ GFPCQ
Sbjct: 2 ESAGHECIGFCEIDKFARASYKAIHDTKGEIELHDITTVSDDTIRGIGHVDVICGGFPCQ 61
Query: 78 PFSQAG 83
FS AG
Sbjct: 62 AFSIAG 67
>gi|15675067|ref|NP_269241.1| putative methyl transferase [Streptococcus pyogenes M1 GAS]
gi|71910613|ref|YP_282163.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS5005]
gi|306827418|ref|ZP_07460705.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pyogenes ATCC
10782]
gi|13622222|gb|AAK33962.1| putative methyl transferase [Streptococcus pyogenes M1 GAS]
gi|71853395|gb|AAZ51418.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS5005]
gi|304430565|gb|EFM33587.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pyogenes ATCC
10782]
Length = 107
Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL L ++ EC EI+ ++ ++Y + F DI ++
Sbjct: 1 MKFLDLFAGIGGFRLGL----INQCHECIGFCEIDKFARQSYKAIYETEGEIEFHDIRQV 56
Query: 60 KTQDI----PDHDVLLAGF 74
QD D++ GF
Sbjct: 57 TDQDFRQLRGQVDIICGGF 75
>gi|269797252|ref|YP_003311152.1| DNA-cytosine methyltransferase [Veillonella parvula DSM 2008]
gi|269093881|gb|ACZ23872.1| DNA-cytosine methyltransferase [Veillonella parvula DSM 2008]
Length = 423
Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 32/129 (24%), Gaps = 50/129 (38%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
ML I D+F G GG+ ++ + E++ + F +I +
Sbjct: 1 MLNIIDVFSGAGGLTEGFR---DNTKFKFICHIEMDKDAC-ASLCLRNIYYYFKNINNLS 56
Query: 61 TQD----------------------------------------------IPDHDVLLAGF 74
+ D ++ G
Sbjct: 57 PYFEYIQGNISREVLYSMVPSEVTKDVLSKEISEESILPIFEFIDKRLGTKELDGIIGGP 116
Query: 75 PCQPFSQAG 83
PCQ +S G
Sbjct: 117 PCQAYSIIG 125
>gi|126668652|ref|ZP_01739604.1| C-5 cytosine-specific DNA methylase [Marinobacter sp. ELB17]
gi|126626911|gb|EAZ97556.1| C-5 cytosine-specific DNA methylase [Marinobacter sp. ELB17]
Length = 347
Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 11/87 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK-TYQANFPNTLIFGDIAKIK 60
+ DLFCG GG+ L + V ++ + N+ + D+ ++
Sbjct: 4 ITAIDLFCGAGGLTHGLIKA----GVNVIAGVDVQKSCKYAYEKNNYGAEFVNMDVRELT 59
Query: 61 TQD------IPDHDVLLAGFPCQPFSQ 81
+ +L PCQPFS
Sbjct: 60 GMELNALYPKKSVRLLAGCAPCQPFST 86
>gi|296139305|ref|YP_003646548.1| DNA-cytosine methyltransferase [Tsukamurella paurometabola DSM
20162]
gi|296027439|gb|ADG78209.1| DNA-cytosine methyltransferase [Tsukamurella paurometabola DSM
20162]
Length = 385
Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI-----A 57
+ + F GIG + LE+ +++ +S++I+P Y+ +F I
Sbjct: 14 RAAEFFAGIGLAGIGLEKA----DIKVAWSNDISPVKYALYEKHFGEREGHRYIVGDLAT 69
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
+QD D DV A FPC S AG
Sbjct: 70 LEASQDPIDIDVAWASFPCTDLSVAG 95
>gi|34451612|gb|AAQ72361.1| BsaWI methylase [Geobacillus stearothermophilus]
Length = 411
Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
L I D F G GGI E + E+ V+TY AN + I DI +
Sbjct: 5 LHIIDCFSGPGGICTGFRAA----GFETLLAIELVESCVETYTANHKDVPVINKDIRDVT 60
Query: 61 TQDIPDH------DVLLAGFPCQPFSQAG 83
+++ D+L AG PC+ FS AG
Sbjct: 61 EEEVKRIVGNRVVDILTAGMPCETFSTAG 89
>gi|282879499|ref|ZP_06288233.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
gi|281306646|gb|EFA98672.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
Length = 438
Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAK 58
+++ +F GIG I L++ F+ +I+ K+Y AN+
Sbjct: 62 IRLGTMFSGIGAIEHALQRL--RLKHHIVFAGDIDANCKKSYFANYDIKEKDWFNDARTF 119
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D+L+ G PCQ FS G
Sbjct: 120 DARKYRGQIDLLVGGAPCQAFSMVG 144
>gi|270012712|gb|EFA09160.1| DNA methyltransferase 2 [Tribolium castaneum]
Length = 329
Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
++I +L+ GIGG+ L+ + ++ + +INP + Y+ NFP+ + ++ +
Sbjct: 1 MEILELYSGIGGMHWALKVSGVEGTIK--AAVDINPTANSVYKHNFPHINLLNRNVQSLT 58
Query: 61 TQDIPDHDV--LLAGFPCQPFSQAG 83
Q I V +L PCQPF++ G
Sbjct: 59 PQFINKLGVNTILMSPPCQPFTRNG 83
>gi|319443146|ref|ZP_07992302.1| DNA-cytosine methyltransferase [Corynebacterium variabile DSM
44702]
Length = 417
Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 11/87 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ F G G+ L LE E + EI+ +T N P+ I T +
Sbjct: 9 VWSFFSGAMGLDLGLE----ETGWEPSLAVEIDARFCETISRNKPDLDIINSDVAELTGE 64
Query: 64 -------IPDHDVLLAGFPCQPFSQAG 83
D+++ G PCQ FS G
Sbjct: 65 ALFARTGENQVDLMVGGPPCQSFSTGG 91
>gi|91089179|ref|XP_974235.1| PREDICTED: similar to DNA cytosine-5 methyltransferase [Tribolium
castaneum]
Length = 579
Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
++I +L+ GIGG+ L+ + ++ + +INP + Y+ NFP+ + ++ +
Sbjct: 251 MEILELYSGIGGMHWALKVSGVEGTIK--AAVDINPTANSVYKHNFPHINLLNRNVQSLT 308
Query: 61 TQDIPDHDV--LLAGFPCQPFSQAG 83
Q I V +L PCQPF++ G
Sbjct: 309 PQFINKLGVNTILMSPPCQPFTRNG 333
>gi|83310257|ref|YP_420521.1| site-specific DNA methylase [Magnetospirillum magneticum AMB-1]
gi|82945098|dbj|BAE49962.1| Site-specific DNA methylase [Magnetospirillum magneticum AMB-1]
Length = 620
Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 29/81 (35%), Gaps = 5/81 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT-Q 62
+ GI + + F +EI P+ +P GD+ I
Sbjct: 24 YGSVCSGI----EAATAAWEPLGWQAAFFAEIEPFPSTVLAHRYPAIPNLGDMTAIDGLA 79
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
DVL+ G PCQ FS AG
Sbjct: 80 WRGKIDVLVGGTPCQAFSVAG 100
>gi|213692027|ref|YP_002322613.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213523488|gb|ACJ52235.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 354
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 10/86 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
++ DLFCG GG+ L L+Q V + Y+ N + + ++
Sbjct: 6 VISAIDLFCGTGGLSLGLKQG----GVRVVAGIDNAASCAYPYEENIKAKFVRKSVREVT 61
Query: 61 TQDIPDHD------VLLAGFPCQPFS 80
++ +L PCQPFS
Sbjct: 62 GDELKRLWGRSSVRLLAGCAPCQPFS 87
>gi|259046940|ref|ZP_05737341.1| modification methylase Sau3AI (cytosine-specificmethyltransferase
Sau3AI) [Granulicatella adiacens ATCC 49175]
gi|259036383|gb|EEW37638.1| modification methylase Sau3AI (cytosine-specificmethyltransferase
Sau3AI) [Granulicatella adiacens ATCC 49175]
Length = 451
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 14/95 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPY-----------SVKTYQANF 47
LK+ +F G+GG + L++ N + +++ P +
Sbjct: 11 LKVFSMFDGVGGFIVGLDEANRKLNKKFFQVTDTNQFEPSRKAQDAFEVGVYNYPKINHS 70
Query: 48 PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
++ ++++ GFPCQ +S A
Sbjct: 71 NEDIMQVSSEYFDEMKANGVNMIVGGFPCQDYSVA 105
>gi|317013479|gb|ADU80915.1| type II R-M system methyltransferase [Helicobacter pylori
Gambia94/24]
Length = 822
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 28/99 (28%), Gaps = 22/99 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
L LF G G L EC ++EI + + N G I
Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEILEKRLNIQRINHKCKFDEGYICGDIK 62
Query: 58 --------------KIKTQDIPDHDVLLAGFPCQPFSQA 82
K D+++A PCQ S A
Sbjct: 63 ELEIKEKILKRIGFYSKNFGNDRVDLVVATPPCQGMSVA 101
>gi|227503804|ref|ZP_03933853.1| DNA restriction-modification system, DNA methylase [Corynebacterium
striatum ATCC 6940]
gi|227199628|gb|EEI79676.1| DNA restriction-modification system, DNA methylase [Corynebacterium
striatum ATCC 6940]
Length = 455
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 12/87 (13%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-------PNTLIFGDIA 57
++ G GG L LEQ EI+ ++ +T + N + D+
Sbjct: 119 FEICAGAGGQALGLEQA----GFHHAAVVEIDNWAAETLRQNRGTEGPLGKWNVHEMDVH 174
Query: 58 KIKTQDI-PDHDVLLAGFPCQPFSQAG 83
+ + D+ G PC PFS AG
Sbjct: 175 DLDGRPWRGKIDLFAGGVPCPPFSIAG 201
>gi|323650454|gb|ADX97305.1| M.KasI [Kluyvera ascorbata]
Length = 388
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 7/85 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN--PYSVKTYQANFPNTLIFGDIAK 58
M + F G G + + + C F+++ + V + +
Sbjct: 1 MKTFYEFFAGSG-----MARAGLGDSWTCVFANDFDHKKGVVYQQNWGEGDLFVGDVKTV 55
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ Q + +++ A FPCQ S AG
Sbjct: 56 TQEQLSKNANLVWASFPCQDLSLAG 80
>gi|291238124|ref|XP_002738981.1| PREDICTED: DNA (cytosine-5-)-methyltransferase [Saccoglossus
kowalevskii]
Length = 1294
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
L+ D+F G GG+ Q+ E ++ E + + ++ N P +F D
Sbjct: 824 LRSLDVFAGCGGLSEGFHQSGVA---ESTWAIEKEEPAAQAFRLNNPGCTVFTDDCNTLL 880
Query: 59 -------------IKTQDIPDHDVLLAGFPCQPFS 80
K ++L G PCQ FS
Sbjct: 881 RLVMDGETTNSVGQKLPQKGQVELLCGGPPCQGFS 915
>gi|283462212|gb|ADB22400.1| DNA (cytosine-5-)-methyltransferase [Saccoglossus kowalevskii]
Length = 820
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
L+ D+F G GG+ Q+ E ++ E + + ++ N P +F D
Sbjct: 350 LRSLDVFAGCGGLSEGFHQSGVA---ESTWAIEKEEPAAQAFRLNNPGCTVFTDDCNTLL 406
Query: 59 -------------IKTQDIPDHDVLLAGFPCQPFS 80
K ++L G PCQ FS
Sbjct: 407 RLVMDGETTNSVGQKLPQKGQVELLCGGPPCQGFS 441
>gi|326483421|gb|EGE07431.1| C-5 cytosine methyltransferase DmtA [Trichophyton equinum CBS
127.97]
Length = 584
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
D FCG GG+ +Q ++ ++ + ++ +Y+ANFP+ L
Sbjct: 278 YTFGDGFCGAGGVSRGAQQA----GLKLLWAFDKWESAINSYRANFPSCLAEHSEVAQFL 333
Query: 62 QDIPDH---DVLLAGFPCQPFSQA 82
+P DV+ PCQPFS A
Sbjct: 334 TSLPREILVDVMHVSPPCQPFSPA 357
>gi|109946897|ref|YP_664125.1| site-specific DNA-methyltransferase [Helicobacter acinonychis
str. Sheeba]
gi|109714118|emb|CAJ99126.1| site-specific DNA-methyltransferase [Helicobacter acinonychis
str. Sheeba]
Length = 418
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
+ + F G GG L + + + ++I+ + + + + I
Sbjct: 3 YNVCEFFVGAGGSHLGF----IQQGFKTLYVNDIDKDALKTLLHNNKELKDAIIDQTSIT 58
Query: 58 KIKTQD-----IPDHDVLLAGFPCQPFSQAG 83
+I + + DV+ AG C+ FS AG
Sbjct: 59 EIDPKKLQTQIKQEIDVIFAGIVCKSFSLAG 89
>gi|28869583|ref|NP_792202.1| C-5 cytosine-specific DNA methylase family protein [Pseudomonas
syringae pv. tomato str. DC3000]
gi|28852825|gb|AAO55897.1| C-5 cytosine-specific DNA methylase family protein [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 295
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI 59
M DLF G+GG + V+ +++ P +V + AN P+ + D+ +
Sbjct: 1 MPTAIDLFAGLGGWSNGARRA----GVKVLWAANHWPVAVGWHSANHPDAIHVCQDLHQA 56
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+P H ++LA CQ S+A
Sbjct: 57 DWSKVPAHGIMLASPCCQGHSKA 79
>gi|300905017|ref|ZP_07122835.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1]
gi|301305818|ref|ZP_07211903.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1]
gi|300403166|gb|EFJ86704.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1]
gi|300838908|gb|EFK66668.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1]
gi|315254408|gb|EFU34376.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1]
Length = 354
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52
+K+ D F G GG Q ++ F + + + +++ANFP
Sbjct: 12 IKVFDFFSGCGGTSQGFHQA----GMDIVFGLDFDVDAASSFRANFPQAAFINSDIRLID 67
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
I K+ + D+ + PCQP+S+
Sbjct: 68 NNAINKLVKKHRNDYILFSGCAPCQPYSK 96
>gi|169825443|ref|YP_001695618.1| modification methylase PspPI [Lysinibacillus sphaericus C3-41]
gi|168994720|gb|ACA42259.1| Modification methylase PspPI [Lysinibacillus sphaericus C3-41]
Length = 475
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ F G G L++ + F+ E + + TY+AN + + DI
Sbjct: 145 IKVASFFAGSGIGDQGLKEA----GFDIVFALENDINAADTYRANHGDHITVQDIEDFDG 200
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
+ + PC ++ A
Sbjct: 201 STLNGIEFAFGSPPCVDYTPA 221
>gi|152973178|ref|YP_001338324.1| putative site-specific DNA methylas [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150958027|gb|ABR80057.1| putative site-specific DNA methylas [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 350
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
Query: 1 MLKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58
M K+ DLFCG GG+ L V +I+P Y+ N I ++
Sbjct: 1 MKKVSCVDLFCGAGGLTHGL----VLEGVPVVAGIDIDPACKFPYETNNKAKFIEKSVSD 56
Query: 59 IKTQD------IPDHDVLLAGFPCQPFS 80
+ D D +L PCQPFS
Sbjct: 57 FTSSDLNELYADSDVRILAGCAPCQPFS 84
>gi|163855609|ref|YP_001629907.1| putative C-5 cytosine-specific DNA methylase [Bordetella petrii
DSM 12804]
gi|163259337|emb|CAP41637.1| putative C-5 cytosine-specific DNA methylase [Bordetella petrii]
Length = 189
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ + GI + + + SEI+P+ ++P+ GD+ I
Sbjct: 6 LQYGSVCSGI----EAVSLAWKPLGWHPAWFSEIDPFPNAVLAHHYPDVPNLGDMTGIAD 61
Query: 62 Q----DIPDHDVLLAGFPCQPFSQAG 83
Q P D+L+ G PCQ FS AG
Sbjct: 62 QILAGTAPAPDILVGGTPCQAFSVAG 87
>gi|187736717|ref|YP_001840974.1| hypothetical protein pEspB_p20 [Exiguobacterium arabatum]
gi|183223750|emb|CAQ35235.1| m5C DNA methyltransferase M.Lsp1109I [Exiguobacterium arabatum]
Length = 377
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 15/98 (15%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFN-----HRNVECF--FSSEINPYSVKTYQANFPNTLIF 53
+ K +LF G GG+ L + + +S++ + + KT++ N + +
Sbjct: 2 IFKKGELFNGPGGLSLGAKNARVIHPETNEEYRIVHEWSNDYDEQACKTFRFNICDDIDD 61
Query: 54 GDIAKIKTQDIP--------DHDVLLAGFPCQPFSQAG 83
+ + +P D D GFPC +SQ G
Sbjct: 62 NSVHHGPVEQLPIGDKSVLGDIDCFAFGFPCNDYSQVG 99
>gi|309379397|emb|CBX21964.1| putative DNA cytosine methyltransferase [Neisseria lactamica
Y92-1009]
Length = 195
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+++ +F GIG + + + N F+ +I+ + K+Y DI +
Sbjct: 38 IRLATVFSGIGAVEQAFYRL--NLNHTIVFAGDIDSHVKKSYLGNYKLNEDFWHNDITQF 95
Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83
+ + D+L+ G PCQ FS G
Sbjct: 96 DARKFRNQVDILVGGSPCQAFSMVG 120
>gi|168467807|ref|ZP_02701644.1| Dmt [Salmonella enterica subsp. enterica serovar Newport str.
SL317]
gi|195629099|gb|EDX48473.1| Dmt [Salmonella enterica subsp. enterica serovar Newport str.
SL317]
Length = 819
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + GI + + + SEI P+ +P GD+ KI
Sbjct: 4 LSYGSVCSGI----EAASIAWEPLGMRPAWFSEIEPFPCAVLAERWPEVPNLGDMTKIAA 59
Query: 62 ----QDIPDHDVLLAGFPCQPFSQAG 83
++ D+L+ G PCQ FS AG
Sbjct: 60 SIAANEVAAPDLLVGGTPCQAFSIAG 85
>gi|238892833|ref|YP_002917567.1| putative site-specific DNA methylase [Klebsiella pneumoniae
NTUH-K2044]
gi|238545149|dbj|BAH61500.1| putative site-specific DNA methylase [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
Length = 350
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
Query: 1 MLKI--TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58
M K+ DLFCG GG+ L V +I+P Y+ N I ++
Sbjct: 1 MKKVSCVDLFCGAGGLTHGL----VLEGVPVVAGIDIDPACKFPYETNNKAKFIEKSVSD 56
Query: 59 IKTQD------IPDHDVLLAGFPCQPFS 80
+ D D +L PCQPFS
Sbjct: 57 FTSSDLNELYADSDVRILAGCAPCQPFS 84
>gi|229061562|ref|ZP_04198906.1| C5 methyltransferase alpha subunit [Bacillus cereus AH603]
gi|228717796|gb|EEL69446.1| C5 methyltransferase alpha subunit [Bacillus cereus AH603]
Length = 353
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 10/74 (13%)
Query: 16 LDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKIKTQD----IPDHDV 69
+ +EQ +C E + ++ K+Y N DI + D DV
Sbjct: 1 MGMEQA----GHKCLGYVEKDKFARKSYEAIHNTKGEWTAHDITTVTNDDLRLLRGTVDV 56
Query: 70 LLAGFPCQPFSQAG 83
+ GFPCQ FS AG
Sbjct: 57 ICGGFPCQAFSIAG 70
>gi|326559835|gb|EGE10235.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 7169]
gi|326569677|gb|EGE19729.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC1]
gi|326575962|gb|EGE25885.1| DNA-cytosine methyltransferase [Moraxella catarrhalis CO72]
Length = 339
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 10/86 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
++ DLFCG+GG+ L + ++ +I+ Y+ N T + +A +
Sbjct: 4 IEAVDLFCGVGGLTAGLIRA----GIKVKAGYDIDAACRYGYEYNNDATFVQKSVADVTA 59
Query: 61 -----TQDIPDHDVLLAGFPCQPFSQ 81
+L PCQPFS
Sbjct: 60 DEIESWYSDGVVRLLAGCAPCQPFST 85
>gi|121594541|ref|YP_986437.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42]
gi|120606621|gb|ABM42361.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42]
Length = 366
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 10/86 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLFCG GG+ + +++P Y+AN + DI+K+
Sbjct: 23 ISCVDLFCGAGGLTHGF----VLEGLPVVAGIDLDPACRFPYEANNQARFVERDISKVTA 78
Query: 62 QDIP------DHDVLLAGFPCQPFSQ 81
++ D +L PCQPFS
Sbjct: 79 SELKALFGDADLTILAGCAPCQPFST 104
>gi|320333452|ref|YP_004170163.1| DNA-cytosine methyltransferase [Deinococcus maricopensis DSM
21211]
gi|319754741|gb|ADV66498.1| DNA-cytosine methyltransferase [Deinococcus maricopensis DSM
21211]
Length = 326
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L ++ G GG L LE E E + ++ T + N P + +
Sbjct: 7 LTSLEICAGAGGQALGLEMA----GYEHAALVEFDAHACNTLRLNRPEWNVVEGDLRAFN 62
Query: 62 --QDIPDHDVLLAGFPCQPFSQAG 83
+L G PCQPFS G
Sbjct: 63 GLPYRGQITLLAGGVPCQPFSHGG 86
>gi|26325124|dbj|BAC26316.1| unnamed protein product [Mus musculus]
Length = 415
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
L++ +L+ GIGG+ L ++ H + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGIGGMHHALRKS--HIPAHVVAAIDVNTVANEVYKHNFPHTHLLSKTIEGIS 61
Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83
+D +++L PCQPF++ G
Sbjct: 62 LEDFDKLSFNMILMSPPCQPFTRIG 86
>gi|195578681|ref|XP_002079192.1| GD23816 [Drosophila simulans]
gi|194191201|gb|EDX04777.1| GD23816 [Drosophila simulans]
Length = 345
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKI 59
+ ++ +LF GIGG+ + + E + ++N + N + +I +
Sbjct: 2 VFRVLELFSGIGGMHYAFKYA--QLDGEIVAALDVNTVANAVYAHNYGSNLVKTRNIQSL 59
Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83
+++ ++LL PCQP ++ G
Sbjct: 60 SVKEVTKLQANMLLMSPPCQPHTRQG 85
>gi|119467548|ref|XP_001257580.1| C-5 cytosine methyltransferase DmtA [Neosartorya fischeri NRRL 181]
gi|119405732|gb|EAW15683.1| C-5 cytosine methyltransferase DmtA [Neosartorya fischeri NRRL 181]
Length = 632
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
D FCG GG+ + H ++ + + ++ TY+ NF +
Sbjct: 324 YTFGDGFCGAGGVSCGASKAGLH----IKWAFDKSENAITTYRLNFATAVCEACDIFCFL 379
Query: 62 QDIPDH---DVLLAGFPCQPFSQA 82
+ P+ DV PCQ FS A
Sbjct: 380 TNKPEDLKVDVSHGSPPCQTFSPA 403
>gi|332217175|ref|XP_003257732.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase [Nomascus
leucogenys]
Length = 393
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK- 60
++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I
Sbjct: 5 RVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITL 62
Query: 61 -TQDIPDHDVLLAGFPCQPFSQAG 83
D D++L PCQPF++ G
Sbjct: 63 EEFDRLSCDMILMSPPCQPFTRIG 86
>gi|170754579|ref|YP_001781640.1| DNA-cytosine methyltransferase [Clostridium botulinum B1 str. Okra]
gi|169119791|gb|ACA43627.1| DNA-cytosine methyltransferase [Clostridium botulinum B1 str. Okra]
Length = 444
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 38/119 (31%), Gaps = 40/119 (33%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-------- 52
M DLF G GG+ + + + E++ +VKTY N +
Sbjct: 1 MYTYIDLFAGPGGLCTGFKNA----GFKPLIAVEMSDNTVKTYARNHDAEIYKLEELIYN 56
Query: 53 ------------------FGDIAKIKTQDIPDH----------DVLLAGFPCQPFSQAG 83
GDI + I + DV+ G PC+ FS AG
Sbjct: 57 KGKLENILNIENNRTALIHGDIRLVDNDIIKEILHKKFKVDSVDVVAGGPPCESFSMAG 115
>gi|323969240|gb|EGB64542.1| DNA adenine methylase [Escherichia coli TA007]
Length = 754
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----I 59
+ GI + + + +EI P+ +P+ GD+ K +
Sbjct: 6 YGSVCSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLAHRWPHVANLGDMTKLAKKV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+I DVL+ G PCQ FS AG
Sbjct: 62 LAGEIESPDVLVGGTPCQAFSIAG 85
>gi|229820628|ref|YP_002882154.1| C-5 cytosine-specific DNA methylase [Beutenbergia cavernae DSM
12333]
gi|229566541|gb|ACQ80392.1| C-5 cytosine-specific DNA methylase [Beutenbergia cavernae DSM
12333]
Length = 316
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ LF G GG+ L +E F+ E + SE+N + + ++P+ GDI +
Sbjct: 12 LRVGPLFSGRGGLDLAVEHVFSA---ETIWFSELNETVARIFGRHWPDAPNLGDITAMDR 68
Query: 62 QDIPDHDVLLAGFPCQ 77
+ D+L FPCQ
Sbjct: 69 RAAAPVDILTGVFPCQ 84
>gi|26341152|dbj|BAC34238.1| unnamed protein product [Mus musculus]
Length = 415
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
L++ +L+ GIGG+ L ++ H + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGIGGMHHALRES--HIPAHVVAAIDVNTVANEVYKHNFPHTHLLSKTIEGIS 61
Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83
+D +++L PCQPF++ G
Sbjct: 62 LEDFDKLSFNMILMSPPCQPFTRIG 86
>gi|2895947|gb|AAC40130.1| putative DNA cytosine methyltransferase DNMT2 [Mus musculus]
Length = 415
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
L++ +L+ GIGG+ L ++ H + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGIGGMHHALRES--HIPAHVVAAIDVNTVANEVYKHNFPHTHLLSKTIEGIS 61
Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83
+D +++L PCQPF++ G
Sbjct: 62 LEDFDKLSFNMILMSPPCQPFTRIG 86
>gi|161016803|ref|NP_034197.3| tRNA (cytosine-5-)-methyltransferase [Mus musculus]
gi|20141317|sp|O55055|TRDMT_MOUSE RecName: Full=tRNA (cytosine-5-)-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2; AltName: Full=DNA methyltransferase
homolog MmuIIP; Short=DNA MTase homolog MmuIIP;
Short=M.MmuIIP; AltName: Full=Met-2
gi|2627433|gb|AAC53529.1| putative DNA methyltransferase [Mus musculus]
gi|56971714|gb|AAH87892.1| TRNA aspartic acid methyltransferase 1 [Mus musculus]
gi|123857912|emb|CAM15443.1| tRNA aspartic acid methyltransferase 1 [Mus musculus]
gi|123858289|emb|CAM16855.1| tRNA aspartic acid methyltransferase 1 [Mus musculus]
gi|148676105|gb|EDL08052.1| DNA methyltransferase 2 [Mus musculus]
Length = 415
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
L++ +L+ GIGG+ L ++ H + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGIGGMHHALRES--HIPAHVVAAIDVNTVANEVYKHNFPHTHLLSKTIEGIS 61
Query: 61 TQDIPD--HDVLLAGFPCQPFSQAG 83
+D +++L PCQPF++ G
Sbjct: 62 LEDFDKLSFNMILMSPPCQPFTRIG 86
>gi|225691144|gb|ACO06245.1| methylcytosine methyltransferase M.BbrII [Bifidobacterium breve
UCC2003]
Length = 349
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 10/82 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
DLFCG GG+ L L+Q + + Y N I + + +D+
Sbjct: 10 IDLFCGTGGLSLGLKQG----GIRVVAGIDNASACSYPYSHNIKAKFIERSVCDVTGEDL 65
Query: 65 PDHD------VLLAGFPCQPFS 80
+L PCQPFS
Sbjct: 66 KRLWGQADVRLLAGCAPCQPFS 87
>gi|90425781|ref|YP_534151.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris
BisB18]
gi|90107795|gb|ABD89832.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris
BisB18]
Length = 374
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 11/83 (13%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKTQD 63
DLF G G + L L+ + E+ ++ + D+ + Q
Sbjct: 19 IDLFSGGGALTLGLKTA----GFRVVSAVEVEQHAFATYKANHPEVFAYKQDVRTVDGQS 74
Query: 64 IPDH------DVLLAGFPCQPFS 80
+ H D+L PCQ F+
Sbjct: 75 LSMHAPRRKIDLLAGCPPCQGFT 97
>gi|9632097|ref|NP_048886.1| hypothetical protein PBCV1_A530R [Paramecium bursaria Chlorella
virus 1]
gi|1620201|gb|AAC96897.1| M.CviAIV cytosine DNA methyltransferase [Paramecium bursaria
Chlorella virus 1]
Length = 335
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+L+ DLF GIGGI L + V E N + + P +F D+
Sbjct: 2 VLRALDLFSGIGGITHGLRKI-----VTPVAFVEKNDEARAFLEKKNPTIPVFDDVCSFD 56
Query: 61 TQDI-PDHDVLLAGFPCQPFSQAG 83
D++ A PC FS AG
Sbjct: 57 ATKWIDKVDIITAVEPCTGFSNAG 80
>gi|73948982|ref|XP_848593.1| PREDICTED: similar to DNA (cytosine-5)-methyltransferase-like
protein 2 (Dnmt2) (DNA methyltransferase homolog
HsaIIP) (DNA MTase homolog HsaIIP) (M.HsaIIP) (PuMet)
isoform 2 [Canis familiaris]
Length = 391
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
L++ +L+ GIGG+ L ++ + + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGIGGMHQALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 61 --TQDIPDHDVLLAGFPCQPFSQAG 83
D +++L PCQPF++ G
Sbjct: 62 LEEFDKLSFNMILMSPPCQPFTRIG 86
>gi|167851523|ref|ZP_02477031.1| DNA-cytosine methyltransferase [Burkholderia pseudomallei B7210]
Length = 352
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 10/86 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLFCG GG+ V +++P Y+AN + DI+K+
Sbjct: 9 ISCVDLFCGAGGLTHGF----ILEGVPVVAGIDMDPACRFPYEANNQARFVERDISKVTM 64
Query: 62 QDIP------DHDVLLAGFPCQPFSQ 81
++ D VL PCQPFS
Sbjct: 65 AELNALFGDADLTVLAGCAPCQPFST 90
>gi|152974572|ref|YP_001374089.1| DNA-cytosine methyltransferase [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152023324|gb|ABS21094.1| DNA-cytosine methyltransferase [Bacillus cytotoxicus NVH 391-98]
Length = 371
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 32/96 (33%), Gaps = 13/96 (13%)
Query: 1 MLKITDLFCGIGGIRLDLEQT------FNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54
+ + + F G GG VE +S+EI P + TY N
Sbjct: 3 IYRKGEFFNGPGGFAAGARMARVLDANGEEYRVEHTWSNEICPDAAATYINNICPAAPDT 62
Query: 55 DIAKI-------KTQDIPDHDVLLAGFPCQPFSQAG 83
I + + + D + GFPC FS G
Sbjct: 63 VIVQDVRTLDIERDTRLGPIDAFVFGFPCNDFSIVG 98
>gi|302134308|ref|ZP_07260298.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 584
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
L+ + GI ++ +E + +EI P+ ++P T GD+ K
Sbjct: 10 LQYGSVCSGI----EAATAAWHPLGMEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGA 65
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I DVL+ G PCQ FS AG
Sbjct: 66 LVLAGKIDAPDVLVGGTPCQAFSVAG 91
>gi|57867437|ref|YP_189088.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis RP62A]
gi|57638095|gb|AAW54883.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis RP62A]
Length = 335
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAK 58
++K+ +LF G+G + L E SE + + + D+
Sbjct: 4 LIKVLELFSGVGSFSISLNTLGIE--HEIVGFSETRKTATQLFCKLHNKKESENLGDVRN 61
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +D+ D D+L+ G PCQ F++AG
Sbjct: 62 VSAKDL-DVDLLVFGSPCQSFTRAG 85
>gi|182438468|ref|YP_001826187.1| putative 5-methylcytosine methyltransferase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178466984|dbj|BAG21504.1| putative 5-methylcytosine methyltransferase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 448
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I DLF G GG+ + VE E + + T A T D+A++ D
Sbjct: 19 IVDLFAGPGGLDIAATI-MKDEGVESIG-VEWDDATRATRAAAGLLTTDVKDVAELGPCD 76
Query: 64 IPDHD--VLLAGFPCQPFSQAG 83
+ VL G PCQ FS AG
Sbjct: 77 PSVVEATVLTGGPPCQSFSVAG 98
>gi|212716999|ref|ZP_03325127.1| hypothetical protein BIFCAT_01946 [Bifidobacterium catenulatum
DSM 16992]
gi|212660059|gb|EEB20634.1| hypothetical protein BIFCAT_01946 [Bifidobacterium catenulatum
DSM 16992]
Length = 392
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 9/84 (10%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ-- 62
+ F GIG RL LE + +S++I+ + Y+ NF +T + ++
Sbjct: 18 LEFFAGIGLARLGLE----ESGFQVEWSNDIDSAKCEMYRNNFTDTPGHTLVEGDMSELS 73
Query: 63 -DIPDHD--VLLAGFPCQPFSQAG 83
D HD + PC S AG
Sbjct: 74 GDDLPHDASIAWGSSPCTDLSLAG 97
>gi|322701389|gb|EFY93139.1| cytosine C5-DNA methyltransferase, putative [Metarhizium acridum
CQMa 102]
Length = 657
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 31/85 (36%), Gaps = 8/85 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKI 59
D F G GG+ + + + + +P +TY NFP T + I
Sbjct: 297 YTFFDAFSGAGGVSRGAQNA----GFKVTHAIDKSPDVWRTYSLNFPETKLYKWPVDRFI 352
Query: 60 KTQDIP--DHDVLLAGFPCQPFSQA 82
D DVL PCQ FS A
Sbjct: 353 GQTDDSSIRVDVLHMSPPCQYFSPA 377
>gi|33323568|gb|AAQ07538.1|AF503408_62 Dam [Enterobacteria phage P7]
Length = 672
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----I 59
+ GI + + + +EI P+ +P+ GD+ K +
Sbjct: 6 YGSVCSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLAHRWPHVANLGDMTKLAQKV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +I DVL+ G PCQ FS AG
Sbjct: 62 QAGEIEAPDVLVGGTPCQAFSIAG 85
>gi|320331149|gb|EFW87118.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 145
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
++ G GG L LE EI P + T + + D+ +
Sbjct: 21 FTSLEMCAGAGGQALGLEMA----GFGHEALVEIEPPACATLRLNRPEWNVKEEDLRQFN 76
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D++ G PC PFS+AG
Sbjct: 77 GSPFFGVDLVAGGVPCPPFSKAG 99
>gi|218782541|ref|YP_002433859.1| DNA-cytosine methyltransferase [Desulfatibacillum alkenivorans
AK-01]
gi|218763925|gb|ACL06391.1| DNA-cytosine methyltransferase [Desulfatibacillum alkenivorans
AK-01]
Length = 381
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--NTLIFGDIAKI 59
+ + F G G L L +C + +E ++Y+ N + D+A
Sbjct: 5 FRFYEFFAGGGMASLGL-----GPQWKCVYVNEWCKKKARSYKINHSGAPRVDVRDVAVA 59
Query: 60 KTQD-IPDHDVLLAGFPCQPFSQAG 83
D + D+ A FPCQ S AG
Sbjct: 60 TPADLRENADLAWASFPCQDLSLAG 84
>gi|182677759|ref|YP_001831905.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633642|gb|ACB94416.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 488
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 34/108 (31%), Gaps = 32/108 (29%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++FCGIGG+ E F++++ P ++ + NF T
Sbjct: 34 YTAGEVFCGIGGLSRGFH----SLGFEPKFANDVWPLALYNFLMNFDATYAATSGTHHGD 89
Query: 62 Q----------------------------DIPDHDVLLAGFPCQPFSQ 81
+ + DVLL G PCQ FS
Sbjct: 90 ILGLVGSVEDISISDILPKISSSSGEGSLKVGEIDVLLGGPPCQGFSL 137
>gi|148271753|ref|YP_001221314.1| putative cytosine-specific DNA methylase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829683|emb|CAN00599.1| putative cytosine-specific DNA methylase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 391
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 12/89 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIKT 61
K+ + F G+G R+ LE + ++++ P + I ++
Sbjct: 16 KVMEFFAGVGLARMGLESA----GFQVTWANDYEPDKHALYERNFRDREAGRDHIYRVGD 71
Query: 62 QDIPDHD-------VLLAGFPCQPFSQAG 83
DHD + PC S AG
Sbjct: 72 VFGLDHDELPRDAALAWGSSPCTDLSLAG 100
>gi|156739999|gb|ABU93584.1| DNA cytosine 5-methyltransferase 1 [Ovis aries]
Length = 1572
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI- 59
L+ D+ G GG+ Q E ++ E +P + N +T+ D +
Sbjct: 1106 LRTLDVSSGCGGLSEGFHQAGIS---ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLL 1162
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
K D ++L G PCQ FS
Sbjct: 1163 KLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFS 1197
>gi|42766604|gb|AAS45432.1| At5g25480 [Arabidopsis thaliana]
Length = 176
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62
+ + + GIGG+R L + E + EIN + YQ NF + G+I +
Sbjct: 17 VLEFYSGIGGMRYSLMASGIVS--EVVEAFEINDSANDVYQHNFKHRPYQGNIQSLTAAD 74
Query: 63 -DIPDHDVLLAGFPCQPFSQAG 83
D + D L PCQP+++ G
Sbjct: 75 LDKYNADAWLLSPPCQPYTRQG 96
>gi|21553420|gb|AAM62513.1| DNA methyltransferase PMT1-like protein [Arabidopsis thaliana]
Length = 383
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62
+ + + GIGG+R L + E + EIN + YQ NF + G+I +
Sbjct: 17 VLEFYSGIGGMRYSLMASGIVS--EVVEAFEINDSANDVYQHNFKHRPYQGNIQSLTAAD 74
Query: 63 -DIPDHDVLLAGFPCQPFSQAG 83
D + D L PCQP+++ G
Sbjct: 75 LDKYNADAWLLSPPCQPYTRQG 96
>gi|83649276|ref|YP_437711.1| site-specific DNA methylase [Hahella chejuensis KCTC 2396]
gi|83637319|gb|ABC33286.1| Site-specific DNA methylase [Hahella chejuensis KCTC 2396]
Length = 404
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 11/87 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ F GIG + L C ++++I+P + + I +
Sbjct: 5 TFIEFFAGIGLMHAGL----VGSGWRCAYANDIDPK-KYQMYRDRFGDAGYYHIGDVWET 59
Query: 63 D------IPDHDVLLAGFPCQPFSQAG 83
D + A FPC S AG
Sbjct: 60 DEVVERIEQAPLLATASFPCVDLSLAG 86
>gi|18420929|ref|NP_568474.1| DNMT2 (DNA METHYLTRANSFERASE-2); DNA binding [Arabidopsis
thaliana]
gi|332006070|gb|AED93453.1| DNA methyltransferase-2 [Arabidopsis thaliana]
Length = 383
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62
+ + + GIGG+R L + E + EIN + YQ NF + G+I +
Sbjct: 17 VLEFYSGIGGMRYSLMASGIVS--EVVEAFEINDSANDVYQHNFKHRPYQGNIQSLTAAD 74
Query: 63 -DIPDHDVLLAGFPCQPFSQAG 83
D + D L PCQP+++ G
Sbjct: 75 LDKYNADAWLLSPPCQPYTRQG 96
>gi|110005053|emb|CAK99384.1| hypothetical c-5 cytosine-specific dna methyltransferase protein
[Spiroplasma citri]
Length = 357
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 12/84 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--NFPNTLIFGDIAKIKTQ 62
DLFCGIGG+ L +E +I+ K+++ N I DI +++
Sbjct: 9 IDLFCGIGGLTNGL----VKSGIEILAGFDIDETCRKSFEQKLNNSPKFIKKDIRELEKN 64
Query: 63 D------IPDHDVLLAGFPCQPFS 80
D + ++ PCQP+S
Sbjct: 65 DLLSFFLQNTYKIIAGCAPCQPYS 88
>gi|331655761|ref|ZP_08356750.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M718]
gi|331046535|gb|EGI18624.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M718]
Length = 754
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----I 59
+ GI + + + +EI + +P+ GD+ K +
Sbjct: 6 YGSVCSGI----EAASIAWEPLGMRPVWFAEIESFPSAVLAHRWPHVANLGDMTKLAKKV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+I DVL+ G PCQ FS AG
Sbjct: 62 LAGEIESPDVLVGGTPCQAFSIAG 85
>gi|304411687|ref|ZP_07393299.1| DNA-cytosine methyltransferase [Shewanella baltica OS183]
gi|307306261|ref|ZP_07586006.1| DNA-cytosine methyltransferase [Shewanella baltica BA175]
gi|304349875|gb|EFM14281.1| DNA-cytosine methyltransferase [Shewanella baltica OS183]
gi|306911134|gb|EFN41561.1| DNA-cytosine methyltransferase [Shewanella baltica BA175]
Length = 371
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 20/98 (20%)
Query: 4 ITDLFCGIGGIRLDLEQT--FNHRNVECFFSSEINPYSVKTYQANF-------------- 47
I DLF G GG+ L + + + E+NP + TY+ NF
Sbjct: 28 IVDLFSGCGGLTLGALEAARKHQLTCNIKLAVELNPEAANTYEENFSENLLNLHKGDISE 87
Query: 48 ----PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
+I + + DVLLAG PCQ S+
Sbjct: 88 IITNYPGDNISEIEEKVRFQNNNIDVLLAGPPCQGHSR 125
>gi|323186482|gb|EFZ71828.1| DNA adenine methylase family protein [Escherichia coli 1357]
Length = 754
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----I 59
+ GI + + + +EI P+ +P+ GD+ K +
Sbjct: 6 YGSVCSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLAHRWPHVANLGDMTKLAQKV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+I DVL+ G PCQ FS AG
Sbjct: 62 LAGEIESPDVLVGGTPCQAFSIAG 85
>gi|309799879|ref|ZP_07694084.1| DNA-cytosine methyltransferase [Streptococcus infantis SK1302]
gi|308116469|gb|EFO53940.1| DNA-cytosine methyltransferase [Streptococcus infantis SK1302]
Length = 412
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 31/130 (23%), Gaps = 52/130 (40%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT------------------- 42
DLF G GG+ Q E+NP++ +T
Sbjct: 11 YNFIDLFAGAGGLSEGFIQA----GFNPIAHVEMNPFAAQTLVTRSSYYYLKQAKQLDIY 66
Query: 43 -------YQANFPNTLIFGDIAKIKTQDIPDH----------------------DVLLAG 73
I I K + DV++ G
Sbjct: 67 YQYLRGEMTQEEFLQKIPKRIKKTVICETMSDTTLPSIFKTIDGIMKIRNIQSVDVVIGG 126
Query: 74 FPCQPFSQAG 83
PCQ +S G
Sbjct: 127 PPCQSYSLVG 136
>gi|316970903|gb|EFV54759.1| putative PWWP domain protein [Trichinella spiralis]
Length = 613
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
+++ LF GI ++ L++ N+E ++S EI+ + ++ I
Sbjct: 326 IRVLSLFDGIATGKIALDELG--INIEIYYSCEIDQEALLVTKVNHENQIVYLGDVRGIT 383
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82
+ K ++I D+L+ G PC S A
Sbjct: 384 REKLEEISPIDLLIGGSPCNDVSIA 408
>gi|121703830|ref|XP_001270179.1| C-5 cytosine methyltransferase DmtA [Aspergillus clavatus NRRL 1]
gi|119398323|gb|EAW08753.1| C-5 cytosine methyltransferase DmtA [Aspergillus clavatus NRRL 1]
Length = 617
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
D FCG GG+ ++ H ++ + + +++ TY+ NF L
Sbjct: 310 YTFGDGFCGAGGVSSGAQKAGLH----IKWAFDQSEHAIATYRMNFETALCEQSDIFSFL 365
Query: 62 QDIPDH---DVLLAGFPCQPFSQA 82
+ PD DV PCQ FS A
Sbjct: 366 TNGPDFLKVDVSHGSPPCQTFSPA 389
>gi|281420198|ref|ZP_06251197.1| modification methylase HphIA [Prevotella copri DSM 18205]
gi|281405693|gb|EFB36373.1| modification methylase HphIA [Prevotella copri DSM 18205]
Length = 379
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 33/89 (37%), Gaps = 12/89 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ D FC GG+ L +IN S+KTY+ N+ ++ DI I
Sbjct: 32 FDVIDFFCCGGGMSLGF--ASLQEYFRIIGGVDINSTSLKTYELNYGTPVMNADITTISP 89
Query: 62 Q----------DIPDHDVLLAGFPCQPFS 80
+ V++ PCQ FS
Sbjct: 90 NSNVVQQTFKINKKRPLVVIGCAPCQGFS 118
>gi|70731152|ref|YP_260893.1| DNA-cytosine methyltransferase [Pseudomonas fluorescens Pf-5]
gi|68345451|gb|AAY93057.1| DNA-cytosine methyltransferase [Pseudomonas fluorescens Pf-5]
Length = 551
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + GI ++ + +EI P+ ++P GD+ K+
Sbjct: 3 ITYGSVCSGI----EAATVAWHPLGWRADWYAEIEPFPSTVLAHHYPEIPNHGDMTKLGA 58
Query: 62 Q----DIPDHDVLLAGFPCQPFSQAG 83
Q I D+L+ G PCQ FS AG
Sbjct: 59 QVLAGKIAAPDILVGGTPCQAFSVAG 84
>gi|331035537|gb|AEC53094.1| DNA-cytosine methyltransferase [Synechococcus phage S-CRM01]
Length = 381
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 13/92 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI 59
+ + F G GG + +E + TY N+P T+I DI ++
Sbjct: 19 LFTVISTFAGGGGSSTGYRLA----GGKLLAINEFVEEARITYHQNYPETIILPDDIRQL 74
Query: 60 KTQDI--------PDHDVLLAGFPCQPFSQAG 83
+D + D+L PC FS AG
Sbjct: 75 TGKDFLDKVGLKPGELDLLDGSPPCSAFSVAG 106
>gi|311897184|dbj|BAJ29592.1| putative modification methylase [Kitasatospora setae KM-6054]
Length = 433
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 31/100 (31%), Gaps = 23/100 (23%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI--- 59
+LF G GG+ + + + +E + +T +AN L G
Sbjct: 13 TGVELFAGAGGLAMSVHRA----GFRPLLFNEFAKRACETLEANGAEWLPDGQKPTRAPE 68
Query: 60 ----------------KTQDIPDHDVLLAGFPCQPFSQAG 83
DVL G PCQPFS G
Sbjct: 69 SGKKVPLVAGDVQDLDMNYLKGQVDVLAGGPPCQPFSLGG 108
>gi|327438866|dbj|BAK15231.1| site-specific DNA methylase [Solibacillus silvestris StLB046]
Length = 392
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 12/95 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQT-------FNHRNVECFFSSEINPYSV-----KTYQANFP 48
+ K +LF G GG+ L + T +E +S++ + +
Sbjct: 2 IFKKGELFNGPGGLSLAAKNTVVIHPETLEEFRIEHTWSNDFDQNACRTYALNICGDEND 61
Query: 49 NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
++I G + K++ +P+ GFPC +S G
Sbjct: 62 PSVICGPVEKLQINQLPEIQCFAFGFPCNDYSLVG 96
>gi|315638243|ref|ZP_07893425.1| site-specific DNA-methyltransferase [Campylobacter upsaliensis
JV21]
gi|315481779|gb|EFU72401.1| site-specific DNA-methyltransferase [Campylobacter upsaliensis
JV21]
Length = 418
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 14/92 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDI 56
I + F G GG L Q ++++ + ++KT + N L DI
Sbjct: 3 YNIVEFFVGAGGSHLGFMQ----EGFSTLYANDFDSNALKTLEHNNKKHLQNAILDSTDI 58
Query: 57 AKIKTQDIPDH-----DVLLAGFPCQPFSQAG 83
++ +++ DV+ G C+ FS AG
Sbjct: 59 TQLNPKELKKKVDSSVDVMFGGIVCKGFSLAG 90
>gi|312964273|ref|ZP_07778577.1| DNA adenine methylase family protein [Escherichia coli 2362-75]
gi|312290986|gb|EFR18860.1| DNA adenine methylase family protein [Escherichia coli 2362-75]
Length = 672
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----I 59
+ GI + + + +EI P+ +P+ GD+ K +
Sbjct: 6 YGSVCSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLAHRWPHVANLGDMTKLAKKV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+I DVL+ G PCQ FS AG
Sbjct: 62 LAGEIESPDVLVGGTPCQAFSIAG 85
>gi|170079525|ref|YP_001736159.1| cytosine-specific methyltransferase [Synechococcus sp. PCC 7002]
gi|169887194|gb|ACB00904.1| Cytosine-specific methyltransferase [Synechococcus sp. PCC 7002]
Length = 270
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT--------YQANFPNTLI 52
ML+ +LF GIGG + + F +E +I+ + Y FP I
Sbjct: 1 MLRHCELFGGIGGFSHAVAKYFPKT-IETTTYCDIDEQARSFAVPGGSAVYSEFFPKVTI 59
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI Q + D++ GFPC SQAG
Sbjct: 60 HKDIRTYYPQ-QKEFDLITCGFPCTGTSQAG 89
>gi|308062818|gb|ADO04706.1| site-specific DNA-methyltransferase [Helicobacter pylori Cuz20]
Length = 418
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDI 56
+ I + F G GG L + + + ++I+ + + + + I
Sbjct: 2 VYNICEFFVGAGGSHLGF----IQQGFKTLYVNDIDKDALKTLLHNNKELKDAIIDQTSI 57
Query: 57 AKIKTQD-----IPDHDVLLAGFPCQPFSQAG 83
+I + + DV+ AG C+ FS AG
Sbjct: 58 TEIDPKKLQTQIKQEVDVIFAGIVCKSFSLAG 89
>gi|253995855|ref|YP_003047919.1| DNA-cytosine methyltransferase [Methylotenera mobilis JLW8]
gi|253982534|gb|ACT47392.1| DNA-cytosine methyltransferase [Methylotenera mobilis JLW8]
Length = 387
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 30/99 (30%), Gaps = 22/99 (22%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ F G G + L E + F +E + + Y+ + +
Sbjct: 8 KVFSFFSGSGFLDLGFE----KSGFDVVFVNEHHKPFLDAYKHSRKKMNLPAPKHGYFEG 63
Query: 63 DI----------------PDHDVL--LAGFPCQPFSQAG 83
+ D++ + G PC FS AG
Sbjct: 64 SVDSEPLKRKVEFLIESLKKTDIVGFIGGPPCPDFSVAG 102
>gi|50841408|gb|AAT84068.1| 5-cytosine DNA methyltransferase [Entamoeba invadens]
Length = 324
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--I 59
L+I + F GIGG+R LE++ H N F + +IN + Y+ N+ ++ ++ +
Sbjct: 9 LRILEFFSGIGGLRASLERSKVHTN-TTFCAIDINEIANTIYEGNYKEKVVVKNLDTVSV 67
Query: 60 KTQDIPDHDVLLAGFPCQPF 79
+ + +V PCQP+
Sbjct: 68 EWIEEKRANVWFMSPPCQPY 87
>gi|294949213|ref|XP_002786099.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239900227|gb|EER17895.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 125
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---KI 59
K+ +LF GIGG+R L + + + ++N S K Y ++ ++ I +IA +
Sbjct: 7 KVLELFSGIGGMRCALASAGLIMSSKIT-AVDVNTESNKVYARSYGDSPIAKNIASAGSV 65
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
K D D+ PCQP+++ G
Sbjct: 66 KWFDSMAADMWTLSPPCQPYTRQG 89
>gi|302521589|ref|ZP_07273931.1| DNA methylase [Streptomyces sp. SPB78]
gi|302430484|gb|EFL02300.1| DNA methylase [Streptomyces sp. SPB78]
Length = 401
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I DLF G GG+ + + E++ + T A T D+ +
Sbjct: 6 IIDLFAGPGGLDIAAKVLGIPS-----VGIELDDDACATRTAAGLVTKQG-DVCDFSATN 59
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
P VL G PCQ ++ AG
Sbjct: 60 FPAATVLTGGPPCQTYTVAG 79
>gi|227540760|ref|ZP_03970809.1| DNA-cytosine methyltransferase [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227183472|gb|EEI64444.1| DNA-cytosine methyltransferase [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 387
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------F 53
++ +LF L + V + E + ++ T + N N
Sbjct: 3 IRAIELFA----GGGGLLLGTSSVGVNHLAAVEWDKWACDTLRENANNGHRLVAGLPVIE 58
Query: 54 GDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83
D+ + P D++ G PCQPFS G
Sbjct: 59 DDVRNLHWDSFPTDVDLVTGGPPCQPFSLGG 89
>gi|332310450|gb|EGJ23545.1| DNA-methyltransferase (Dcm) [Listeria monocytogenes str. Scott A]
Length = 325
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M++I +LF GIG R LE ++ EI P++V+ Y F N + D+ K
Sbjct: 1 MVQILELFGGIGAPRKALENLGVD--IKSLDYVEILPFAVQAYNNIFSNDYVPQDVTKWN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+L+ G PCQ +S+ G
Sbjct: 59 ----MSVDLLIHGSPCQDWSKNG 77
>gi|331646824|ref|ZP_08347925.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M605]
gi|331044366|gb|EGI16495.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli M605]
Length = 862
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----I 59
+ GI + + + +EI P+ +P+ GD+ K +
Sbjct: 6 YGSVCSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLAHRWPHVANLGDMTKLAKKV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+I DVL+ G PCQ FS AG
Sbjct: 62 LAGEIESPDVLVGGTPCQAFSIAG 85
>gi|254933776|ref|ZP_05267135.1| DNA-cytosine methyltransferase [Listeria monocytogenes HPB2262]
gi|293585336|gb|EFF97368.1| DNA-cytosine methyltransferase [Listeria monocytogenes HPB2262]
Length = 325
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M++I +LF GIG R LE ++ EI P++V+ Y F N + D+ K
Sbjct: 1 MVQILELFGGIGAPRKALENLGVD--IKSLDYVEILPFAVQAYNNIFSNDYVPQDVTKWN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+L+ G PCQ +S+ G
Sbjct: 59 ----MSVDLLIHGSPCQDWSKNG 77
>gi|322510858|gb|ADX06172.1| putative C-5 site-specific DNA methyltransferase [Organic Lake
phycodnavirus 1]
Length = 327
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 37/115 (32%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49
+K LF G+GG L + Q E +E + S+++++ NFP
Sbjct: 1 MKCISLFSGMGGDTLGMIQA----GCEVIAFNEYDKASIQSHKMNFPYSELICASVKERE 56
Query: 50 -------------------TLIFGDIAKIKTQDIPDH--DVLLAGFPCQPFSQAG 83
+I I+ + + D++ AG PCQ FS G
Sbjct: 57 KYKESLTGTKKENHKAMKDYDDVYNIQNIQDDVLGSYKADLIFAGHPCQGFSNGG 111
>gi|227525081|ref|ZP_03955130.1| possible DNA (cytosine-5-)-methyltransferase [Lactobacillus
hilgardii ATCC 8290]
gi|227087758|gb|EEI23070.1| possible DNA (cytosine-5-)-methyltransferase [Lactobacillus
hilgardii ATCC 8290]
Length = 143
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIA 57
+ DLF G GG+ LEQ+ + ++ E++ Y N PN +
Sbjct: 3 INAIDLFSGCGGLTEGLEQS----EINVEYAIELDRKISNIYATNHPNVKIINSDIQKVT 58
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ + + +++ PCQ F+Q
Sbjct: 59 DTTFKQMENVNLVAGCPPCQGFTQ 82
>gi|168485680|ref|ZP_02710188.1| modification methylase HaeIII (Cytosine-specificmethyltransferase
HaeIII) (M.HaeIII) [Streptococcus pneumoniae
CDC1087-00]
gi|183571278|gb|EDT91806.1| modification methylase HaeIII (Cytosine-specificmethyltransferase
HaeIII) (M.HaeIII) [Streptococcus pneumoniae
CDC1087-00]
Length = 363
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG---------D 55
DLF G GG L ++ + EI+ +VKTY+ N P + +
Sbjct: 7 IDLFSGAGGTTSGL----KKSGIDVQVAVEIDSVAVKTYKLNNPEVSVIDKDINVVSGDE 62
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + D D +L+A PCQ FS G
Sbjct: 63 VKEYLKIDTDDKLMLVACPPCQGFSTIG 90
>gi|328885641|emb|CCA58880.1| DNA methylase [Streptomyces venezuelae ATCC 10712]
Length = 426
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 30/87 (34%), Gaps = 9/87 (10%)
Query: 1 MLK----ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI 56
M+ + DLF G GG + L + E + ++ KT A T+
Sbjct: 1 MITGRDLVIDLFAGPGGWSVPL----RRFGIRDVGL-EWDEWACKTRAAAGLLTIRTDVA 55
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+A PCQ +S AG
Sbjct: 56 MYPAGIFAGRTRGFIASPPCQAWSMAG 82
>gi|221120982|ref|XP_002166687.1| PREDICTED: similar to TRNA aspartic acid methyltransferase 1
[Hydra magnipapillata]
Length = 388
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
LK+ + + GIGG+ L +VE + EIN + Y+ NFP T + +I +
Sbjct: 5 LKVLEFYSGIGGVHYALTYAGVSVHVE--AAFEINTSANSVYRHNFPQTTLLQKNIEGLN 62
Query: 61 TQD--IPDHDVLLAGFPCQPFSQAG 83
+D + DV PCQP+++ G
Sbjct: 63 LEDLEHFNADVWTMSPPCQPYTRLG 87
>gi|294629552|ref|ZP_06708112.1| DNA methylase [Streptomyces sp. e14]
gi|292832885|gb|EFF91234.1| DNA methylase [Streptomyces sp. e14]
Length = 436
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 8/83 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA---NFPNTLIFGDIAKIK 60
+ DLF G GG+ + + E + + T A + + + +
Sbjct: 16 VLDLFAGPGGLDVAGHRLGIPS-----LGIEWDRSACLTRYAAGLDTLHADVSAVRRESF 70
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
P+ +VL G PCQ +S AG
Sbjct: 71 ESLPPEINVLAGGPPCQTYSVAG 93
>gi|291299135|ref|YP_003510413.1| DNA-cytosine methyltransferase [Stackebrandtia nassauensis DSM
44728]
gi|290568355|gb|ADD41320.1| DNA-cytosine methyltransferase [Stackebrandtia nassauensis DSM
44728]
Length = 437
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 21/98 (21%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT---------------YQANF 47
+LF G GG+ + + +E + +T
Sbjct: 13 TCVELFAGAGGLAMSVHAA----GFRPLLVNEFAKRACETLRANGAVDRGDDLSVPDPGG 68
Query: 48 PNTLIFGDIAKIKTQD--IPDHDVLLAGFPCQPFSQAG 83
P L+ GD+ ++K + DVL G PCQPFS G
Sbjct: 69 PWPLVEGDVRQVKFEYLAEAGVDVLAGGPPCQPFSLGG 106
>gi|242023477|ref|XP_002432160.1| DNA methyltransferase, putative [Pediculus humanus corporis]
gi|212517542|gb|EEB19422.1| DNA methyltransferase, putative [Pediculus humanus corporis]
Length = 1161
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 19/96 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
LK + F G GG+ L Q+ + ++ +I+ + + ++ NF N ++F
Sbjct: 698 LKTLNAFSGCGGLAEGLRQSGIA---DIAWAIDIDKPTSEAFKLNFSNIVMFESDCNFFL 754
Query: 61 ---------------TQDIPDHDVLLAGFPCQPFSQ 81
+ + + L G PCQ FS
Sbjct: 755 KEVLSGKTFDKDGNRYPEKGEVEFLCGGPPCQGFST 790
>gi|198420928|ref|XP_002123461.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha [Ciona
intestinalis]
Length = 662
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI + L+Q V+ +F+SEI+ ++ + P + +I
Sbjct: 375 IRVLSLFDGIATGFVSLKQLGIE--VKVYFASEIDHEAICVSEIRHPRVVKHVGDVCEIT 432
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
D D+++ G PC S
Sbjct: 433 DKMLSDWGPFDLVIGGSPCNDLSI 456
>gi|112983066|ref|NP_001036934.1| DNA cytosine-5 methyltransferase [Bombyx mori]
gi|54888741|dbj|BAD67190.1| DNA cytosine-5 methyltransferase [Bombyx mori]
Length = 336
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKT 61
+I +L+ GIGG+ ++ + + +IN + Y+ NFP TL +I +
Sbjct: 8 RILELYSGIGGMHCAWNES--TIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTP 65
Query: 62 QDIPDH--DVLLAGFPCQPFSQAG 83
+I + D +L PCQPF++ G
Sbjct: 66 IEIEKYKIDTVLMSPPCQPFTRNG 89
>gi|297159178|gb|ADI08890.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis
BCW-1]
Length = 386
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 15/93 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ G GG + L + EI+ + +T + N +GD +K
Sbjct: 8 FTSVEICAGAGGQAVGLHEA----GFRHLALIEIDDNACETLELNVTGNPEWGDCKVLKR 63
Query: 62 Q-----------DIPDHDVLLAGFPCQPFSQAG 83
+ + D+L G PC PFS AG
Sbjct: 64 DLTKFDVGELSLNPGELDLLAGGVPCPPFSAAG 96
>gi|325996923|gb|ADZ49131.1| adenine/cytosine specific DNA methyltransferase [Helicobacter
pylori 2017]
Length = 822
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 28/99 (28%), Gaps = 22/99 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
L LF G G L EC ++EI + + N G I
Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEILEKRLNIQRINNKCKFDEGYICGDIK 62
Query: 58 --------------KIKTQDIPDHDVLLAGFPCQPFSQA 82
K D+++A PCQ S A
Sbjct: 63 ELEIKEKILKQIGFYSKKFGNDRVDLVVATPPCQGMSVA 101
>gi|307636739|gb|ADN79189.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori 908]
gi|325995325|gb|ADZ50730.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori 2018]
Length = 822
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 28/99 (28%), Gaps = 22/99 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
L LF G G L EC ++EI + + N G I
Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEILEKRLNIQRINNKCKFDEGYICGDIK 62
Query: 58 --------------KIKTQDIPDHDVLLAGFPCQPFSQA 82
K D+++A PCQ S A
Sbjct: 63 ELEIKEKILKQIGFYSKKFGNDRVDLVVATPPCQGMSVA 101
>gi|302793280|ref|XP_002978405.1| hypothetical protein SELMODRAFT_108655 [Selaginella moellendorffii]
gi|300153754|gb|EFJ20391.1| hypothetical protein SELMODRAFT_108655 [Selaginella moellendorffii]
Length = 336
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 16/93 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52
+++ LF GIGGI + LE+ S E N + ++ + T
Sbjct: 209 IRVLSLFSGIGGIEVALEKLGIPIKF--LVSVETNADCHRVLRSWWHRTRQRGTHIVLGD 266
Query: 53 -----FGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
I ++ + D++ G PC FS
Sbjct: 267 VTELSRERIEELAARAGGGFDLVAGGSPCNNFS 299
>gi|332674342|gb|AEE71159.1| site-specific DNA-methyltransferase [Helicobacter pylori 83]
Length = 418
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
I + F G GG L + + + ++I+ + + + + I
Sbjct: 3 YNICEFFVGAGGSHLGF----IQQGFKTLYVNDIDKDALKTLLHNNKELKDAIIDQTSIT 58
Query: 58 KIKTQD-----IPDHDVLLAGFPCQPFSQAG 83
+I + + DV+ AG C+ FS AG
Sbjct: 59 EIDPKKLQTQIKQEVDVIFAGIVCKSFSLAG 89
>gi|317179735|dbj|BAJ57523.1| Type II DNA modification enzyme [Helicobacter pylori F30]
Length = 418
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
I + F G GG L + + + ++I+ + + + + I
Sbjct: 3 YNICEFFVGAGGSHLGF----IQQGFKTLYVNDIDKDALKTLLHNNKELKDAIIDQTSIT 58
Query: 58 KIKTQD-----IPDHDVLLAGFPCQPFSQAG 83
+I + + DV+ AG C+ FS AG
Sbjct: 59 EIDPKKLQTQIKQEVDVIFAGIVCKSFSLAG 89
>gi|261838825|gb|ACX98591.1| cytosine-methyltransferase [Helicobacter pylori 51]
Length = 413
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
I + F G GG L + + + ++I+ + + + + I
Sbjct: 3 YNICEFFVGAGGSHLGF----IQQGFKTLYVNDIDKDALKTLLHNNKELKDAIIDQTSIT 58
Query: 58 KIKTQD-----IPDHDVLLAGFPCQPFSQAG 83
+I + + DV+ AG C+ FS AG
Sbjct: 59 EIDPKKLQTQIKQEVDVIFAGIVCKSFSLAG 89
>gi|224437470|ref|ZP_03658432.1| site-specific DNA-methyltransferase [Helicobacter cinaedi CCUG
18818]
Length = 418
Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 14/91 (15%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIA 57
+ + F G GG L Q ++++ + ++KT + N L DI
Sbjct: 4 NVVEFFVGAGGSHLGFMQ----EGFSTLYANDFDSNALKTLEYNNKKHLQNAILDSTDIT 59
Query: 58 KIKTQDIPDH-----DVLLAGFPCQPFSQAG 83
++ +++ DV+ G C+ FS AG
Sbjct: 60 QLNPKELKKKLDSSVDVMFGGIVCKGFSLAG 90
>gi|296243020|ref|YP_003650507.1| DNA-cytosine methyltransferase [Thermosphaera aggregans DSM
11486]
gi|296095604|gb|ADG91555.1| DNA-cytosine methyltransferase [Thermosphaera aggregans DSM
11486]
Length = 323
Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIK 60
+ DLFCG GG L T R + + NP + ++ DI +
Sbjct: 4 YTVVDLFCGAGGFSLGFHLT---RRFRTLLAIDNYNPAGLTYKLNFPMVKVLLEDIKDVN 60
Query: 61 TQDIP------DHDVLLAGFPCQPFSQA 82
+ DVL+ PC+PF+ A
Sbjct: 61 DSLLRKILGGAKIDVLIGSPPCEPFTGA 88
>gi|119490455|ref|ZP_01622916.1| cytosine specific DNA methyltransferase (DDEM) [Lyngbya sp. PCC
8106]
gi|119453926|gb|EAW35081.1| cytosine specific DNA methyltransferase (DDEM) [Lyngbya sp. PCC
8106]
Length = 399
Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFG 54
LK DLFCG+GG+ L+ T R +E ++ + ++ Y+ N P T
Sbjct: 3 LKALDLFCGMGGLSWGLKST---RKIEPIWAVDNCQTALNLYELNLPKTNLLNLDLSRQL 59
Query: 55 DIAKIKT--QDIPDHDVLLAGFPCQPFSQ 81
D+ + D+++ G PCQ F+Q
Sbjct: 60 DVTSLIEKINFNGGIDLMVGGSPCQGFTQ 88
>gi|296081999|emb|CBI21004.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ + + GIGG+R L++ + + + +IN + YQ NF + G+I +
Sbjct: 15 RVLEFYSGIGGMRYSLKRGGVNA--KIVEAFDINNIANDVYQHNFGHRPCQGNIQSLTAA 72
Query: 63 --DIPDHDVLLAGFPCQPFSQAG 83
D L PCQP+++ G
Sbjct: 73 DLDRYRAHAWLLSPPCQPYTRQG 95
>gi|257453711|ref|ZP_05618997.1| modification methylase Eco47II [Enhydrobacter aerosaccus SK60]
gi|257448894|gb|EEV23851.1| modification methylase Eco47II [Enhydrobacter aerosaccus SK60]
Length = 415
Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 23 NHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKI-KTQDIPDHDVLLAGFPCQPFS 80
+ +E + Y+ +T +I DI + + D+L GFPCQPFS
Sbjct: 99 EQAGFKSVLLNEKDKYACQTLRANRPDWNVIEDDITNVDFSHLKGQVDLLTGGFPCQPFS 158
Query: 81 QAG 83
AG
Sbjct: 159 YAG 161
>gi|310791056|gb|EFQ26585.1| C-5 cytosine-specific DNA methylase [Glomerella graminicola M1.001]
Length = 750
Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+ D FCG GG E+ H ++ + + TY+ NFPNT +F ++
Sbjct: 318 YTVFDSFCGAGGFSRGAERAGLH----VRYAVDNCEKACATYRLNFPNTNLFETSVDELM 373
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82
+ + + D+L PCQ +S A
Sbjct: 374 RSQKETELRTDILHLSPPCQTWSPA 398
>gi|296425866|ref|XP_002842459.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638727|emb|CAZ86650.1| unnamed protein product [Tuber melanosporum]
Length = 857
Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60
D FCG GG+ + +S + N +V TY+ NFP + +
Sbjct: 523 YTFGDAFCGGGGMSSGARAA----GFKNAWSFDSNSEAVSTYRRNFPQCTTYHSTVNDFL 578
Query: 61 TQDIPD--HDVLLAGFPCQPFSQA 82
T P+ DV+ PCQP S A
Sbjct: 579 TLRHPELLVDVVHLSPPCQPHSPA 602
>gi|282883032|ref|ZP_06291633.1| type II restriction-modification system methylation subunit
[Peptoniphilus lacrimalis 315-B]
gi|281297089|gb|EFA89584.1| type II restriction-modification system methylation subunit
[Peptoniphilus lacrimalis 315-B]
Length = 312
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
KI +LF GIG IR E EI+ VK+Y A + + K
Sbjct: 5 KILELFGGIGAIRKAFINLKIP--YEVVDYVEIDKACVKSYNALYGENYKPKSVVGYKAP 62
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G CQ FS+ G
Sbjct: 63 NEKI-DLIMHGSSCQDFSRIG 82
>gi|325475447|gb|EGC78628.1| hypothetical protein HMPREF9353_00209 [Treponema denticola F0402]
Length = 354
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 14/90 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53
K D FCG GG+ L Q ++ + + + TY+ N P++
Sbjct: 7 YKAIDFFCGGGGMTYGLRQA----GIDVIAGIDFDKDAKATYEYNNPHSTFIEVDIKELE 62
Query: 54 --GDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
K + D + + PCQ +S
Sbjct: 63 NEYFERIFKIKKKDDKLIFVGCSPCQFYSI 92
>gi|147856667|emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]
Length = 1148
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ + + GIGG+R L++ + + + +IN + YQ NF + G+I +
Sbjct: 865 RVLEFYSGIGGMRYSLKRGGVNA--KIVEAFDINNIANDVYQHNFGHRPYQGNIQSLTAA 922
Query: 63 --DIPDHDVLLAGFPCQPFSQAG 83
D L PCQP+++ G
Sbjct: 923 DLDRYRAHAWLLSPPCQPYTRQG 945
>gi|254901064|ref|ZP_05260988.1| DNA-methyltransferase (cytosine-specific) [Listeria monocytogenes
J0161]
Length = 320
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M++I +LF GIG R LE ++ EI P++V+ Y F N + D+ K
Sbjct: 1 MVQILELFGGIGAPRKALENLGVD--IKSLDYVEILPFAVQAYNNIFSNDYVAQDVTKWN 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+L+ G PCQ +S+ G
Sbjct: 59 ----MSVDLLIHGSPCQDWSKNG 77
>gi|293596744|ref|ZP_05263998.2| DNA-methyltransferase [Listeria monocytogenes J2818]
gi|293592003|gb|EFG00338.1| DNA-methyltransferase [Listeria monocytogenes J2818]
Length = 327
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M++I +LF GIG R LE ++ EI P++V+ Y F N + D+ K
Sbjct: 8 MVQILELFGGIGAPRKALENLGVD--IKSLDYVEILPFAVQAYNNIFSNDYVAQDVTKWN 65
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D+L+ G PCQ +S+ G
Sbjct: 66 ----MSVDLLIHGSPCQDWSKNG 84
>gi|39995337|ref|NP_951288.1| type II DNA modification methyltransferase [Geobacter
sulfurreducens PCA]
gi|39982099|gb|AAR33561.1| type II DNA modification methyltransferase, putative [Geobacter
sulfurreducens PCA]
Length = 305
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 7/81 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
++ +LFCGIGG +E V + + + + + D+ ++
Sbjct: 1 MRAVELFCGIGGFAAAVE----GTGVRVVAAMDQDEAALATYRLNFPGHGARKVDLERVS 56
Query: 61 TQD--IPDHDVLLAGFPCQPF 79
+ D+ PCQP+
Sbjct: 57 AWELTAGGVDLWWLSPPCQPY 77
>gi|154504856|ref|ZP_02041594.1| hypothetical protein RUMGNA_02366 [Ruminococcus gnavus ATCC 29149]
gi|153794739|gb|EDN77159.1| hypothetical protein RUMGNA_02366 [Ruminococcus gnavus ATCC 29149]
Length = 369
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 29/103 (28%), Gaps = 25/103 (24%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------- 50
LKI F G G + L E + F +E +P +K Y+ +
Sbjct: 7 LKIFSFFSGSGFLDLGFET----NGFDIEFVNEFHPAFMKAYKYSREKMGLKSPTYGYFN 62
Query: 51 ----------LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
Q + G PC FS AG
Sbjct: 63 GDVNEFLENKKDDMHSWMRDAQKDGSLIGFIGGPPCPDFSIAG 105
>gi|242253856|ref|NP_001156357.1| tRNA (cytosine-5-)-methyltransferase [Sus scrofa]
gi|226222432|gb|ACO38647.1| DNA methyltransferase 2 [Sus scrofa]
Length = 408
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---IFGDIAK 58
L++ +L+ GIGG+ L ++ + + ++N + + Y+ NFP+T +
Sbjct: 4 LRVLELYSGIGGMHQALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGVT 61
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
++ D +++L PCQPF++ G
Sbjct: 62 LEEFDRLSFNMVLMSPPCQPFTRIG 86
>gi|66768381|ref|YP_243143.1| DNA methyltransferase [Xanthomonas campestris pv. campestris str.
8004]
gi|66573713|gb|AAY49123.1| DNA methyltransferase [Xanthomonas campestris pv. campestris str.
8004]
Length = 512
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKI 59
+ GI + + +E + +EI P+ Y + ++
Sbjct: 11 YGSVCSGI----EAVSLAWQPLGLEAAWFAEIEPFPSAVLAHHYPHVPNLGDMTMIARQV 66
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+P D+L+ G PCQ FS AG
Sbjct: 67 HAGTVPAPDILVGGTPCQSFSVAG 90
>gi|261495470|ref|ZP_05991917.1| modification methylase Bsp6I-like protein [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308804|gb|EEY10060.1| modification methylase Bsp6I-like protein [Mannheimia haemolytica
serotype A2 str. OVINE]
Length = 157
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----A 57
+ GI ++ + SEI P+ FP+ GD+
Sbjct: 4 FTYGSICSGI----EAASVAWHDIG-TPLWFSEIEPFPCAVLAHRFPDVPNLGDMIALPE 58
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
KI ++IP DVL+ G PCQ FS AG
Sbjct: 59 KILNREIPAPDVLVGGTPCQAFSMAG 84
>gi|262280408|ref|ZP_06058192.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus
RUH2202]
gi|262258186|gb|EEY76920.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus
RUH2202]
Length = 354
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 15/90 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60
+K+ D F G GG L Q ++ + + + +TY+ANFP DI ++
Sbjct: 1 MKVIDFFSGCGGASEGLRQA----GLDIAIGLDFDKKASETYEANFPEAKFYNVDIRELD 56
Query: 61 TQD----------IPDHDVLLAGFPCQPFS 80
++ + +L+A PCQPFS
Sbjct: 57 EKELAAAFKDINQKEEPLLLVACAPCQPFS 86
>gi|322709664|gb|EFZ01240.1| cytosine C5-DNA methyltransferase, putative [Metarhizium anisopliae
ARSEF 23]
Length = 654
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 30/86 (34%), Gaps = 10/86 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDI 56
D F G GG+ + + + + +P +TY NF + I
Sbjct: 294 YTFFDAFSGAGGVSRGAQNA----GFKVTHAIDKSPDVWRTYSLNFPEAKLYKWSVDRFI 349
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ I DVL PCQ FS A
Sbjct: 350 EQTNDASI-RVDVLHMSPPCQYFSPA 374
>gi|221236677|ref|YP_002519114.1| DNA-cytosine methyltransferase [Caulobacter crescentus NA1000]
gi|220965850|gb|ACL97206.1| DNA-cytosine methyltransferase [Caulobacter crescentus NA1000]
Length = 381
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAKI 59
+ + F G G RL L + C F+++ +P TY+ANF + GD+ +
Sbjct: 15 RFLEFFAGGGMARLGL-----GADWACAFANDFDPVKAATYRANFADAGKHFQEGDVFAL 69
Query: 60 KTQDIPDHDVLLAGFPCQPFS 80
+ +PD D+ A PCQ FS
Sbjct: 70 SAERLPDADLAWASSPCQDFS 90
>gi|149919032|ref|ZP_01907517.1| DNA-cytosine methyltransferase family protein [Plesiocystis
pacifica SIR-1]
gi|149820185|gb|EDM79604.1| DNA-cytosine methyltransferase family protein [Plesiocystis
pacifica SIR-1]
Length = 401
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 14/88 (15%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--------- 55
LF G GG+ L LE+ + E + T +AN P+ +
Sbjct: 9 ISLFTGAGGLDLGLEKA----GFQVRLCVEKDTACRSTLRANRPDWPLSTPGDIHLGESS 64
Query: 56 -IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ ++ G PCQP+S+A
Sbjct: 65 SLMAQAGVQRRQLSLVSGGPPCQPWSKA 92
>gi|291529734|emb|CBK95320.1| DNA-methyltransferase (dcm) [Eubacterium rectale M104/1]
Length = 339
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LKI +LF GIG R L+ + EI PY+V Y + F N D+ K
Sbjct: 12 LKILELFGGIGAPRKALQNLGYQL--KSIDYVEILPYAVMAYNSIFDNGYKPQDVTKWNL 69
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
D DVL+ G PCQ +S+ G
Sbjct: 70 ----DPDVLIHGSPCQDWSKNG 87
>gi|61554791|gb|AAX46615.1| DNA methyltransferase 2 isoform a [Bos taurus]
Length = 377
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
L+ +L+ GIGG+ L ++ + + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRALELYSGIGGMHQALRESCIPA--QVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 61 --TQDIPDHDVLLAGFPCQPFSQAG 83
D +++L PCQPF++ G
Sbjct: 62 LEEFDRLSFNMILMSPPCQPFTRIG 86
>gi|32441269|ref|NP_861528.1| tRNA (cytosine-5-)-methyltransferase [Bos taurus]
gi|75046080|sp|Q7YS61|TRDMT_BOVIN RecName: Full=tRNA (cytosine-5-)-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2
gi|31074159|gb|AAP20550.1| DNA cytosine-5 methyltransferase 2 [Bos taurus]
gi|296481442|gb|DAA23557.1| tRNA (cytosine-5-)-methyltransferase [Bos taurus]
Length = 391
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
L+ +L+ GIGG+ L ++ + + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRALELYSGIGGMHQALRESCIPA--QVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 61 --TQDIPDHDVLLAGFPCQPFSQAG 83
D +++L PCQPF++ G
Sbjct: 62 LEEFDRLSFNMILMSPPCQPFTRIG 86
>gi|124486003|ref|YP_001030619.1| hypothetical protein Mlab_1183 [Methanocorpusculum labreanum Z]
gi|124363544|gb|ABN07352.1| DNA-cytosine methyltransferase [Methanocorpusculum labreanum Z]
Length = 352
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 14/87 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D FCG GGI L ++ +I+P +TY+ N N + DI I +I
Sbjct: 12 IDFFCGGGGITKGLSDA----GIKVLGGIDISPDLKRTYEENNHNKFVNFDIRTISGSNI 67
Query: 65 PDHD----------VLLAGFPCQPFSQ 81
+L PCQPFS+
Sbjct: 68 YKEFPEIEGDEDNLLLAGCAPCQPFSK 94
>gi|320527420|ref|ZP_08028601.1| DNA (cytosine-5-)-methyltransferase [Solobacterium moorei F0204]
gi|320132133|gb|EFW24682.1| DNA (cytosine-5-)-methyltransferase [Solobacterium moorei F0204]
Length = 428
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 31/130 (23%), Gaps = 52/130 (40%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT------------------- 42
DLF G GG+ + E++ ++ +T
Sbjct: 10 YNFIDLFAGAGGLSEGF----LQSGFKPVAHVEMDEFAARTLETRSAYYYLKETGNIGLY 65
Query: 43 -------YQANFPNTLIFGDIAKIKTQDIPDH----------------------DVLLAG 73
+ I I K + DV++ G
Sbjct: 66 KKYLSGAIDRSEFMQFIPASITKTIINETMSDESLTGIFRTIDGIMKIRGIEKIDVIVGG 125
Query: 74 FPCQPFSQAG 83
PCQ +S G
Sbjct: 126 PPCQAYSLVG 135
>gi|331090154|ref|ZP_08339042.1| hypothetical protein HMPREF1025_02625 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330402100|gb|EGG81672.1| hypothetical protein HMPREF1025_02625 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 428
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 31/130 (23%), Gaps = 52/130 (40%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK-------------------- 41
DLF G GG+ Q + E+N ++ K
Sbjct: 10 YNFIDLFAGAGGLSEGFLQA----GFKPVAHVEMNEFAAKTLETRSAYYYLKGTDNLALY 65
Query: 42 ------TYQANFPNTLIFGDIAKIKTQDIPDH----------------------DVLLAG 73
+ I I K + DV++ G
Sbjct: 66 KKYVSGKISRDDFMKQIPASITKTIINETMSDETLPAIFKTIDGIMKIRGINKIDVIVGG 125
Query: 74 FPCQPFSQAG 83
PCQ +S G
Sbjct: 126 PPCQAYSLVG 135
>gi|119716511|ref|YP_923476.1| DNA-cytosine methyltransferase [Nocardioides sp. JS614]
gi|119537172|gb|ABL81789.1| DNA-cytosine methyltransferase [Nocardioides sp. JS614]
Length = 399
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 21/96 (21%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----------------P 48
+LF G GG+ + L + +E+N + T +AN P
Sbjct: 18 IELFSGGGGLAMALHEA----GFRHLLLNELNKRACATLRANNAVDYLPDETPPATLADP 73
Query: 49 NTLIFGDIAKI-KTQDIPDHDVLLAGFPCQPFSQAG 83
LI G I ++ T + D DV+ G PCQPFS G
Sbjct: 74 WPLIEGGIGEVDFTPFLGDVDVVAGGVPCQPFSLGG 109
>gi|251792768|ref|YP_003007494.1| DNA-cytosine methyltransferase [Aggregatibacter aphrophilus
NJ8700]
gi|247534161|gb|ACS97407.1| DNA-cytosine methyltransferase [Aggregatibacter aphrophilus
NJ8700]
Length = 383
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK-- 58
M + GI + + + + SEI P+ Q ++PN GD+
Sbjct: 1 MFSYGSVCSGIEAVSVAWQDFA-----TPLWFSEIEPFPCALLQHHYPNVPNLGDMQNLP 55
Query: 59 --IKTQDIPDHDVLLAGFPCQPFSQAG 83
I ++IP DVL+ G PCQ +S AG
Sbjct: 56 QKILHREIPAPDVLIGGTPCQSYSYAG 82
>gi|218848105|ref|YP_002454768.1| DNA-cytosine methyltransferase [Bacillus cereus G9842]
gi|218546236|gb|ACK98629.1| DNA-cytosine methyltransferase [Bacillus cereus G9842]
Length = 438
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 10/84 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQ 62
+ +F G GG+ + + E++ + TY+ N P T DI +K
Sbjct: 8 VIGIFSGCGGLDTGFS----EYDFNVQLAIELDSDACDTYKKNHPETEVWNRDIKTVKGD 63
Query: 63 DI-----PDHDVLLAGFPCQPFSQ 81
+I +LL G PCQ FS
Sbjct: 64 EIRKLVGNKPLILLGGSPCQSFSI 87
>gi|331002102|ref|ZP_08325621.1| hypothetical protein HMPREF0491_00483 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411196|gb|EGG90612.1| hypothetical protein HMPREF0491_00483 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 309
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
+LF GIG IR L + + EI+ VK+Y A + DI +
Sbjct: 2 ELFGGIGAIRKALIR--QNIPHRVIDYVEIDKNCVKSYNALYKANFKSKDIVGYHAPN-E 58
Query: 66 DHDVLLAGFPCQPFSQAG 83
+ D+L+ G PCQ FS+ G
Sbjct: 59 NIDLLMHGSPCQDFSRVG 76
>gi|313668701|ref|YP_004048985.1| modification methylase [Neisseria lactamica ST-640]
gi|313006163|emb|CBN87625.1| putative modification methylase [Neisseria lactamica 020-06]
Length = 372
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKIKTQDIP 65
F GIG + + + N F+ +I+ + K+Y DI + +
Sbjct: 5 FSGIGAVEQAFYRL--NLNHTIVFAGDIDSHVKKSYLGNYKLNEDFWHNDITQFDARKFR 62
Query: 66 DH-DVLLAGFPCQPFSQAG 83
+ D+L+ G PCQ FS G
Sbjct: 63 NQVDILVGGSPCQAFSMVG 81
>gi|219871000|ref|YP_002475375.1| cytosine specific DNA methyltransferase (BSP6IM) [Haemophilus
parasuis SH0165]
gi|219691204|gb|ACL32427.1| cytosine specific DNA methyltransferase (BSP6IM) [Haemophilus
parasuis SH0165]
Length = 295
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 36/57 (63%)
Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
++C SEI+P TYQ F + GD+ +I Q +PD DV+LAGFPCQ FS AG
Sbjct: 1 MQCVGHSEIDPEPDTTYQIFFNDRNNLGDLTQIDIQKLPDFDVMLAGFPCQTFSIAG 57
>gi|302343998|ref|YP_003808527.1| DNA-cytosine methyltransferase [Desulfarculus baarsii DSM 2075]
gi|301640611|gb|ADK85933.1| DNA-cytosine methyltransferase [Desulfarculus baarsii DSM 2075]
Length = 371
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
DLFCG GG+ L + V+ +I+P Y AN + + +++ ++
Sbjct: 20 VDLFCGAGGLTHGLVKA----GVDVRLGVDIDPACEHPYVANNNARFLLKSVEELEASEL 75
Query: 65 PDH------DVLLAGFPCQPFSQ 81
H +L PCQ FS
Sbjct: 76 ERHYRKNGIKLLAGCAPCQTFST 98
>gi|198422315|ref|XP_002126359.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha [Ciona
intestinalis]
Length = 678
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ LF GI + L+Q ++ F +SEI+ +++ Q P + GDI K+
Sbjct: 386 IRVLSLFDGIATGVVALKQLGLQ--IQKFVASEIDEAAIRLVQNRHPEVMHVGDITKLTD 443
Query: 62 QD---IPDHDVLLAGFPCQPFSQA 82
D D+++ G PC S A
Sbjct: 444 DDITRYGPFDLVMGGSPCNDLSGA 467
>gi|16127856|ref|NP_422420.1| DNA-cytosine methyltransferase [Caulobacter crescentus CB15]
gi|13425378|gb|AAK25588.1| DNA-cytosine methyltransferase [Caulobacter crescentus CB15]
Length = 374
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN---TLIFGDIAKI 59
+ + F G G RL L + C F+++ +P TY+ANF + GD+ +
Sbjct: 8 RFLEFFAGGGMARLGL-----GADWACAFANDFDPVKAATYRANFADAGKHFQEGDVFAL 62
Query: 60 KTQDIPDHDVLLAGFPCQPFS 80
+ +PD D+ A PCQ FS
Sbjct: 63 SAERLPDADLAWASSPCQDFS 83
>gi|116751262|ref|YP_847949.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans
MPOB]
gi|116700326|gb|ABK19514.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans
MPOB]
Length = 371
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
DLFCG GG+ L + V+ +I+P Y AN + + +++ ++
Sbjct: 20 VDLFCGAGGLTHGLVKA----GVDVRLGVDIDPACEHPYVANNNARFLLKSVEELEASEL 75
Query: 65 PDH------DVLLAGFPCQPFSQ 81
H +L PCQ FS
Sbjct: 76 ERHYRKNGIKLLAGCAPCQTFST 98
>gi|317011903|gb|ADU82511.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori
Lithuania75]
Length = 544
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 28/99 (28%), Gaps = 22/99 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
L LF G G L EC ++EI + + N I+
Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEILEKRLNIQRINRKCKFDESYISGDIK 62
Query: 58 --------------KIKTQDIPDHDVLLAGFPCQPFSQA 82
K D+++A PCQ S A
Sbjct: 63 KPETKEKILKQIGFYSKKFGNDRVDLVVATPPCQGMSVA 101
>gi|210134249|ref|YP_002300688.1| type II R-M system methyltransferase [Helicobacter pylori P12]
gi|210132217|gb|ACJ07208.1| type II R-M system methyltransferase [Helicobacter pylori P12]
Length = 822
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 28/99 (28%), Gaps = 22/99 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
L LF G G L EC ++EI + + N I+
Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEILEKRLNIQRINRKCKFDESYISGDIK 62
Query: 58 --------------KIKTQDIPDHDVLLAGFPCQPFSQA 82
K D+++A PCQ S A
Sbjct: 63 KPETKEKILKQIEFYSKKFGNDRVDLVVATPPCQGMSVA 101
>gi|29366785|ref|NP_813725.1| gp9.1 [Streptomyces phage phiBT1]
gi|29243105|emb|CAD80133.1| gp9.1 [Streptomyces phage phiBT1]
Length = 166
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ I +L G GG+ + +E V E++ + + + FP+ GD+ +
Sbjct: 1 MAILELCAGYGGLGIAVE-ALTGDKVTVVA--EVHKAACEVMKYRFPDAPNIGDVRHARW 57
Query: 62 QD-IPDHDVLLAGFPCQPFSQAG 83
+D + D + AGFPCQ S AG
Sbjct: 58 EDLRGEVDTITAGFPCQDISNAG 80
>gi|163941367|ref|YP_001646251.1| C-5 cytosine-specific DNA methylase [Bacillus weihenstephanensis
KBAB4]
gi|163863564|gb|ABY44623.1| C-5 cytosine-specific DNA methylase [Bacillus weihenstephanensis
KBAB4]
Length = 251
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ DL GI GI + ++ EI ++ + N+PN IF D+ K+
Sbjct: 1 MKMLDLCSGIAGISMAAGWA----GIDTAAFCEIEEFNQSVLRKNYPNIPIFPDLYKLTK 56
Query: 62 Q-------DIPDHDVLLAGFPCQPFSQAG 83
Q D+ V+ AG+PCQ S G
Sbjct: 57 QSLIDGGVDVDSIGVISAGYPCQGESLVG 85
>gi|254671709|emb|CBA09495.1| modification methylase [Neisseria meningitidis alpha153]
Length = 351
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK D FCG GG+ ++ ++ + P +TY+AN I D+ +++
Sbjct: 6 LKAVDFFCGGGGMSYGMQSA----GIQVLAGIDYEPSCKETYEANINAKFIQADVFELQP 61
Query: 62 ---------QDIPDHDVLLAGFPCQPFSQ 81
+ D +L+ PCQ +S
Sbjct: 62 ETLEKELGLKKNDDDLILIGCSPCQYWSV 90
>gi|121635670|ref|YP_975915.1| modification methylase (cytosine-specific DNA methylase)
[Neisseria meningitidis FAM18]
gi|218767413|ref|YP_002341925.1| modification methylase (cytosine-specific DNA methylase)
[Neisseria meningitidis Z2491]
gi|120867376|emb|CAM11148.1| modification methylase (cytosine-specific DNA methylase)
[Neisseria meningitidis FAM18]
gi|121051421|emb|CAM07714.1| modification methylase (cytosine-specific DNA methylase)
[Neisseria meningitidis Z2491]
gi|261393340|emb|CAX50974.1| putative cytosine-specific methyltransferase [Neisseria
meningitidis 8013]
gi|319409676|emb|CBY89977.1| putative cytosine-specific methyltransferase [Neisseria
meningitidis WUE 2594]
gi|325131421|gb|EGC54130.1| modification methylase [Neisseria meningitidis M6190]
Length = 351
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK D FCG GG+ ++ ++ + P +TY+AN I D+ +++
Sbjct: 6 LKAVDFFCGGGGMSYGMQSA----GIQVLAGIDYEPSCKETYEANINAKFIQADVFELQP 61
Query: 62 ---------QDIPDHDVLLAGFPCQPFSQ 81
+ D +L+ PCQ +S
Sbjct: 62 ETLEKELGLKKNDDDLILIGCSPCQYWSV 90
>gi|260796005|ref|XP_002592995.1| hypothetical protein BRAFLDRAFT_275730 [Branchiostoma floridae]
gi|229278219|gb|EEN49006.1| hypothetical protein BRAFLDRAFT_275730 [Branchiostoma floridae]
Length = 386
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
L++ + + G+GG+ + ++ + +IN + Y+ NFP+ + DI IK
Sbjct: 11 LRVVEFYSGVGGMHYAVLESKVPA--TVVAALDINTTANAVYRHNFPHVNLLQRDITGIK 68
Query: 61 TQDI--PDHDVLLAGFPCQPFSQAG 83
+ + DV + PCQPF++ G
Sbjct: 69 LPEFQSWNADVFMMSPPCQPFTRVG 93
>gi|156358701|ref|XP_001624654.1| predicted protein [Nematostella vectensis]
gi|156211447|gb|EDO32554.1| predicted protein [Nematostella vectensis]
Length = 226
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---NTLIFGDIAK 58
++ + + GIGG+ L+ +N E + EI+ + Y NFP ++ +
Sbjct: 7 FRVVEFYSGIGGMHYALK--GCKKNAEVVAALEISTTANTVYGHNFPTTKIWNCNIEVCE 64
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++ PCQP++ G
Sbjct: 65 LCNVTTMPAIYMVMSPPCQPYTWVG 89
>gi|290960099|ref|YP_003491281.1| hypothetical protein SCAB_57141 [Streptomyces scabiei 87.22]
gi|260649625|emb|CBG72740.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 414
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 22/96 (22%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK--TYQANFPNTLIFGDIAKIKTQD 63
++ G GG + L + E + ++V+ + I ++ D
Sbjct: 2 EICAGAGGQAVGLHNA----GFDHLALVEWDQHAVRTLRANVHDWPGWDKSRIDALEPMD 57
Query: 64 ----------------IPDHDVLLAGFPCQPFSQAG 83
D D+L G PC PFS AG
Sbjct: 58 VREFLGSKVHTSLDLEKGDLDLLAGGVPCPPFSLAG 93
>gi|168018932|ref|XP_001761999.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686716|gb|EDQ73103.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 970
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ LF G+GGI L + + +SSE+ +++ ++ P GDI K+
Sbjct: 356 VLSLFDGLGGIWQALTKLGIPFSG---YSSEVLAPAIQVVKSRHPRVKHVGDIRKLNLSA 412
Query: 64 IPDH-DVLLAGFPCQPFSQAG 83
+P+ D+++ GFPCQ S G
Sbjct: 413 VPEKVDLVVGGFPCQDLSIMG 433
>gi|30263689|ref|NP_846066.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. Ames]
gi|47529099|ref|YP_020448.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49186533|ref|YP_029785.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. Sterne]
gi|65321007|ref|ZP_00393966.1| COG0270: Site-specific DNA methylase [Bacillus anthracis str.
A2012]
gi|165872817|ref|ZP_02217444.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. A0488]
gi|167636020|ref|ZP_02394326.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. A0442]
gi|167639742|ref|ZP_02398011.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. A0193]
gi|170689288|ref|ZP_02880483.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. A0465]
gi|170706823|ref|ZP_02897281.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. A0389]
gi|177652017|ref|ZP_02934563.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. A0174]
gi|190569254|ref|ZP_03022149.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis Tsiankovskii-I]
gi|227813418|ref|YP_002813427.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. CDC 684]
gi|229604763|ref|YP_002867927.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. A0248]
gi|254683612|ref|ZP_05147472.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. CNEVA-9066]
gi|254721107|ref|ZP_05182898.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. A1055]
gi|254735716|ref|ZP_05193422.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. Western North America
USA6153]
gi|254739585|ref|ZP_05197280.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. Kruger B]
gi|254751154|ref|ZP_05203193.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. Vollum]
gi|254759471|ref|ZP_05211496.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. Australia 94]
gi|30258324|gb|AAP27552.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. Ames]
gi|47504247|gb|AAT32923.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49180460|gb|AAT55836.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. Sterne]
gi|164711495|gb|EDR17045.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. A0488]
gi|167512143|gb|EDR87520.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. A0193]
gi|167528532|gb|EDR91294.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. A0442]
gi|170128241|gb|EDS97110.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. A0389]
gi|170666746|gb|EDT17514.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. A0465]
gi|172082386|gb|EDT67451.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. A0174]
gi|190559628|gb|EDV13618.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis Tsiankovskii-I]
gi|227006861|gb|ACP16604.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. CDC 684]
gi|229269171|gb|ACQ50808.1| prophage LambdaBa01, C-5 cytosine-specific DNA methylase family
protein [Bacillus anthracis str. A0248]
Length = 259
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK+ DL GI GI + + ++ EI ++ K + N+PN IF D+ K+
Sbjct: 9 LKMLDLCSGIAGISMAADWA----GIDTAAFCEIEEFNQKVLRKNYPNIPIFPDLYKLMK 64
Query: 62 Q-------DIPDHDVLLAGFPCQPFSQAG 83
Q D+ V+ AG+PCQ S G
Sbjct: 65 QSLIDGGVDVDSIGVISAGYPCQGESLVG 93
>gi|254804174|ref|YP_003082395.1| putative type II DNA modification methylase [Neisseria
meningitidis alpha14]
gi|304388624|ref|ZP_07370688.1| possible DNA (cytosine-5-)-methyltransferase [Neisseria
meningitidis ATCC 13091]
gi|254667716|emb|CBA03597.1| putative type II DNA modification methylase [Neisseria
meningitidis alpha14]
gi|304337441|gb|EFM03611.1| possible DNA (cytosine-5-)-methyltransferase [Neisseria
meningitidis ATCC 13091]
Length = 351
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK D FCG GG+ ++ ++ + P +TY+AN I D+ +++
Sbjct: 6 LKAVDFFCGGGGMSYGMQSA----GIQVLAGIDYEPSCKETYEANINAKFIQADVFELQP 61
Query: 62 ---------QDIPDHDVLLAGFPCQPFSQ 81
+ D +L+ PCQ +S
Sbjct: 62 ETLEKELGLKKNDDDLILIGCSPCQYWSV 90
>gi|116007318|ref|NP_001036355.1| methyltransferase 2, isoform C [Drosophila melanogaster]
gi|113194978|gb|ABI31309.1| methyltransferase 2, isoform C [Drosophila melanogaster]
Length = 345
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKI 59
+ ++ +LF GIGG+ + + + ++N + N + +I +
Sbjct: 2 VFRVLELFSGIGGMHYAFNYA--QLDGQIVAALDVNTVANAVYAHNYGSNLVKTRNIQSL 59
Query: 60 KTQDIP--DHDVLLAGFPCQPFSQAG 83
+++ ++LL PCQP ++ G
Sbjct: 60 SVKEVTKLQANMLLMSPPCQPHTRQG 85
>gi|255081819|ref|XP_002508128.1| DNA methyltransferase [Micromonas sp. RCC299]
gi|226523404|gb|ACO69386.1| DNA methyltransferase [Micromonas sp. RCC299]
Length = 404
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ + +CG+GG+ L + + + +INP Y+ NF +I +
Sbjct: 31 LRAVEFYCGVGGLHYSLLRARPDA--KVVAAFDINPNGNDVYEHNFGVRPSQKNIYGLPV 88
Query: 62 QDIPDHD--VLLAGFPCQPFSQAG 83
D + L PCQPF++ G
Sbjct: 89 ASFDRLDAGLWLLSPPCQPFTRQG 112
>gi|307149806|ref|YP_003890849.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306986606|gb|ADN18484.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 645
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 28/86 (32%), Gaps = 11/86 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-------SVKTYQANFPNTLIFGD 55
I LF G G + ++ + E +P + Y+ N LI
Sbjct: 20 TIGTLFSGGGLFDVGAMLA----GIKPVWGVEFDPNSPSLSSAIAECYEKNLGRHLIKKP 75
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ + + D L PCQ FS
Sbjct: 76 VQDVDFSSLVPPDFLHCSPPCQKFSL 101
>gi|242058009|ref|XP_002458150.1| hypothetical protein SORBIDRAFT_03g027700 [Sorghum bicolor]
gi|241930125|gb|EES03270.1| hypothetical protein SORBIDRAFT_03g027700 [Sorghum bicolor]
Length = 233
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ + + GIGG+R L + E + +IN + Y+ NF + G+I +
Sbjct: 8 RVLEFYSGIGGMRYSLMASGVRA--EVVEAFDINDVANDVYEHNFGHRPCQGNIQTLTAS 65
Query: 63 --DIPDHDVLLAGFPCQPFSQAG 83
D L PCQP+++ G
Sbjct: 66 DLDKYKAHAWLLSPPCQPYTRQG 88
>gi|237710586|ref|ZP_04541067.1| DNA-cytosine methyltransferase [Bacteroides sp. 9_1_42FAA]
gi|229455308|gb|EEO61029.1| DNA-cytosine methyltransferase [Bacteroides sp. 9_1_42FAA]
Length = 366
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK- 60
K+ F GG + + + +EI+P +K Y+ N + DI +
Sbjct: 34 KVFSCFACGGGSTMGYKIA----GYDVIGCNEIDPRMMKCYETNHHPQYSYLEDIRDLVR 89
Query: 61 ----TQDIPDHDVLLAGFPCQPFSQAG 83
+++ + D+L PC FS +G
Sbjct: 90 RNNLPEELYNLDILDGSPPCSTFSMSG 116
>gi|294463393|gb|ADE77228.1| unknown [Picea sitchensis]
Length = 380
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ + + GIGG+R LEQ+ H + + +IN + + Y+ NF ++ G+I +
Sbjct: 12 FRVLEFYSGIGGMRFSLEQSGIHA--KVVEAFDINNIANEVYKHNFGHSPYQGNIQSLTA 69
Query: 62 Q--DIPDHDVLLAGFPCQPFSQAG 83
D + L PCQP+++ G
Sbjct: 70 SQLDKFRANAWLLSPPCQPYTRQG 93
>gi|167763801|ref|ZP_02435928.1| hypothetical protein BACSTE_02181 [Bacteroides stercoris ATCC
43183]
gi|167697917|gb|EDS14496.1| hypothetical protein BACSTE_02181 [Bacteroides stercoris ATCC
43183]
Length = 357
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 10/87 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK- 60
K+ F GG + + + +EI+P +K Y N F DI +
Sbjct: 23 KVFSCFACGGGSTMGYKLA----GFDVIGCNEIDPKMMKCYIENHNPQYTFLEDIRDLVR 78
Query: 61 ----TQDIPDHDVLLAGFPCQPFSQAG 83
+++ + D+L PC FS +G
Sbjct: 79 RNNLPEELYNLDILDGSPPCSTFSMSG 105
>gi|328708218|ref|XP_003243626.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Acyrthosiphon
pisum]
Length = 1227
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L+ D+F G GG+ LE + + ++ E + + ++ N P +F +
Sbjct: 762 LRGLDIFAGCGGLSRGLEDSGLVISN---WAIECDDKAAGAFKLNNPEATVFVEDCNHLL 818
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFS 80
+ D + G PCQ FS
Sbjct: 819 KLAMAGEKSNSKNQNIPQKGEVDFICGGPPCQGFS 853
>gi|189460101|ref|ZP_03008886.1| hypothetical protein BACCOP_00737 [Bacteroides coprocola DSM
17136]
gi|255693802|ref|ZP_05417477.1| modification methylase HgiDII [Bacteroides finegoldii DSM 17565]
gi|189433184|gb|EDV02169.1| hypothetical protein BACCOP_00737 [Bacteroides coprocola DSM
17136]
gi|260620371|gb|EEX43242.1| modification methylase HgiDII [Bacteroides finegoldii DSM 17565]
Length = 355
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 14/90 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60
K D FCG GG+ L Q + + + + +TY+ N + I +I ++
Sbjct: 6 YKAIDFFCGGGGMTCGLRQA----GINVIAGVDFDQDAKETYEYNNSGSVFIQTNIKNLR 61
Query: 61 TQDIPDHD---------VLLAGFPCQPFSQ 81
+ +L+ PCQ +S
Sbjct: 62 SNYFERKFGIRKNDDFLILVGCSPCQFYSI 91
>gi|298486609|ref|ZP_07004667.1| DNA methyltransferase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298158824|gb|EFH99886.1| DNA methyltransferase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 589
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
L+ + GI ++ +E + +E+ P+ ++P T GD+ K
Sbjct: 10 LQYGSVCSGI----EAATAAWHPLGMEPVWFAEVEPFPSAVLAHHYPRTPNLGDMTKLGA 65
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I DVL+ G PCQ FS AG
Sbjct: 66 LVLAGKIKAPDVLVGGTPCQAFSVAG 91
>gi|329767774|ref|ZP_08259290.1| hypothetical protein HMPREF0428_00987 [Gemella haemolysans M341]
gi|328838875|gb|EGF88469.1| hypothetical protein HMPREF0428_00987 [Gemella haemolysans M341]
Length = 336
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 10/88 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKI- 59
LK+ F GG + + E EI+P + + P L DI
Sbjct: 15 LKVFGTFICGGGSTMGFKLA----GFEHLGGVEIDPKVAEVYQLNHNPKYLYNEDIRAFL 70
Query: 60 ----KTQDIPDHDVLLAGFPCQPFSQAG 83
+++ + DVL PC FS AG
Sbjct: 71 ARDEYPEELYNLDVLEGSPPCSSFSLAG 98
>gi|207091855|ref|ZP_03239642.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter
pylori HPKX_438_AG0C1]
Length = 109
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
KI DLFCG GG LE + + + ++ T++ N N +
Sbjct: 3 YKILDLFCGAGGFSAGLECLKE---FDALIGLDCDKQALITFENNHKNAIGVYGDITQTE 59
Query: 62 QDIP--------DHDVLLAGFPCQPFSQAG 83
+ ++++ G PCQ FS G
Sbjct: 60 IKEKVIKLAQKLEINMIIGGPPCQGFSNKG 89
>gi|330939305|gb|EGH42698.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 382
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKI 59
M + F G GG+ + EC +++++ + + + L+ GD+A++
Sbjct: 1 MASFYEFFAG-GGMA----RAGLGAEWECLLANDLSTQKAACYAENWGDDHLLIGDVAEL 55
Query: 60 KTQDIP-DHDVLLAGFPCQPFSQAG 83
T+D+P D+ A FPCQ S AG
Sbjct: 56 TTKDLPGHADLAWASFPCQDLSLAG 80
>gi|78047842|ref|YP_364017.1| cytosine-specific DNA methyltransferase [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|78036272|emb|CAJ23963.1| cytosine-specific DNA methyltransferase [Xanthomonas campestris
pv. vesicatoria str. 85-10]
Length = 512
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKI 59
+ GI + + +E + +EI P+ Y + ++
Sbjct: 11 YGSVCSGI----EAVSLAWQPLGLEAAWFAEIEPFPSAVLAHHYPHVPNLGDMTTIARQV 66
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+P D+L+ G PCQ FS AG
Sbjct: 67 HAGTVPAPDILVGGTPCQSFSVAG 90
>gi|22256926|sp|O33481|MTP1_PSYTA RecName: Full=Modification methylase PspPI; Short=M.PspPI; AltName:
Full=Cytosine-specific methyltransferase PspPI
gi|2558610|emb|CAA68841.1| type II DNA m5C-methyltransferase [Psychrobacter sp.]
Length = 416
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 23 NHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKI-KTQDIPDHDVLLAGFPCQPFS 80
+ +E + Y+ T +I DI + T D+L GFPCQPFS
Sbjct: 94 EQAGFKSVLLNEKDKYACATLRANRPNWNVIEDDIENVDFTHLNGKVDLLTGGFPCQPFS 153
Query: 81 QAG 83
AG
Sbjct: 154 YAG 156
>gi|326427797|gb|EGD73367.1| methyltransferase [Salpingoeca sp. ATCC 50818]
Length = 519
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 12/94 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF------FSSE------INPYSVKTYQANFPN 49
L++ DL+ GIGG+ L N +S E +N + K YQ N
Sbjct: 7 LRVVDLYSGIGGLHAALGVAIARINARPTRAGQAPWSVEDVRPFDVNTAANKVYQHNHSI 66
Query: 50 TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + + D ++ L PCQP+++ G
Sbjct: 67 APSPRGIDALTPRHVRDSNLWLMSPPCQPYTRIG 100
>gi|302773662|ref|XP_002970248.1| hypothetical protein SELMODRAFT_411110 [Selaginella moellendorffii]
gi|300161764|gb|EFJ28378.1| hypothetical protein SELMODRAFT_411110 [Selaginella moellendorffii]
Length = 565
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 16/93 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52
+++ LF GIGGI + LE+ S E + + ++ + T
Sbjct: 438 IRVLSLFSGIGGIEVALEKLGIPIKF--LVSVETSADCHRVLRSWWHRTRQRGTHIVLGD 495
Query: 53 -----FGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
I ++ + D++ G PC FS
Sbjct: 496 VTELSRERIEELAARAGGGFDLVAGGSPCNNFS 528
>gi|300723947|ref|YP_003713260.1| hypothetical protein XNC1_3088 [Xenorhabdus nematophila ATCC
19061]
gi|297630477|emb|CBJ91142.1| Dmt (fragment) [Xenorhabdus nematophila ATCC 19061]
Length = 389
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK-- 60
+ GI + + + SEI + + + ++P L GD+ +I
Sbjct: 17 TFGSVCSGI----EAASVAWEPLGLFPSWFSEIEKFPSEVLRYHWPYVLNLGDMTQISAL 72
Query: 61 --TQDIPDHDVLLAGFPCQPFSQAG 83
D+L+ G PCQ FS AG
Sbjct: 73 IAENQADAPDILVGGTPCQAFSIAG 97
>gi|167997277|ref|XP_001751345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697326|gb|EDQ83662.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 812
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ LF G+GGI L + +SSE+ +++ ++ P+ GD+ K+
Sbjct: 148 VLSLFDGLGGIWQALTNLGIPFSG---YSSEVLAPAIQVVKSRHPHVKHVGDVRKLNLSA 204
Query: 64 IPDH-DVLLAGFPCQPFSQAG 83
IP+ D+++ GFPCQ S G
Sbjct: 205 IPEKVDLVVGGFPCQDLSIMG 225
>gi|57242037|ref|ZP_00369977.1| cytosine specific DNA methyltransferase (DDEM) [Campylobacter
upsaliensis RM3195]
gi|57017229|gb|EAL54010.1| cytosine specific DNA methyltransferase (DDEM) [Campylobacter
upsaliensis RM3195]
Length = 125
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 14/91 (15%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIA 57
+ + F G GG L Q + ++++ + ++KT + N L DI
Sbjct: 4 NVVEFFVGAGGSHLGFMQ----EGFKTLYANDFDSNALKTLEHNNKKHLQNAILDSTDIT 59
Query: 58 KIKTQDIPDH-----DVLLAGFPCQPFSQAG 83
+I +++ DV+ C+ FS AG
Sbjct: 60 QISPKELKKKLDSSVDVMFGDIVCKGFSLAG 90
>gi|294789078|ref|ZP_06754317.1| adenine/cytosine DNA methyltransferase [Simonsiella muelleri ATCC
29453]
gi|294482819|gb|EFG30507.1| adenine/cytosine DNA methyltransferase [Simonsiella muelleri ATCC
29453]
Length = 837
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 30/98 (30%), Gaps = 21/98 (21%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----------------YSVKTYQ 44
L LF G +Q EC ++E+ P Y Q
Sbjct: 6 LTYISLFSSAGVGCYGFKQA----GFECIATNELLPKRLNIQKLNNKCRYETGYIAGDIQ 61
Query: 45 ANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
I+ +I K DV++A PCQ S A
Sbjct: 62 QAETKQAIYAEIEKWHKLGNDKVDVVIATPPCQGMSVA 99
>gi|169794286|ref|YP_001712079.1| putative cytosine-specific methyltransferase [Acinetobacter
baumannii AYE]
gi|213159140|ref|YP_002321138.1| DNA cytosine methyltransferase [Acinetobacter baumannii AB0057]
gi|215481844|ref|YP_002324026.1| Modification methylase HgiDII(Cytosine-specificmethyltransferase
HgiDII) [Acinetobacter baumannii AB307-0294]
gi|332850048|ref|ZP_08432435.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013150]
gi|332871527|ref|ZP_08440021.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013113]
gi|169147213|emb|CAM85072.1| putative cytosine-specific methyltransferase [Acinetobacter
baumannii AYE]
gi|213058300|gb|ACJ43202.1| DNA cytosine methyltransferase [Acinetobacter baumannii AB0057]
gi|213986404|gb|ACJ56703.1| Modification methylase HgiDII(Cytosine-specificmethyltransferase
HgiDII) [Acinetobacter baumannii AB307-0294]
gi|332730897|gb|EGJ62203.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013150]
gi|332731381|gb|EGJ62673.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013113]
Length = 355
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 15/91 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIK 60
+K+ D F G GG L Q ++ + + + DI ++
Sbjct: 1 MKVIDFFSGCGGASEGLRQA----GLDITIGLDFDIKAAETYQANFPEALFYNVDIRELD 56
Query: 61 TQD----------IPDHDVLLAGFPCQPFSQ 81
++ + + +A PCQPFS
Sbjct: 57 EKELAKAFKEKNREKEPLLFVACAPCQPFST 87
>gi|254442311|ref|ZP_05055787.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae
bacterium DG1235]
gi|198256619|gb|EDY80927.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae
bacterium DG1235]
Length = 338
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 24 HRNVECFFSSEINPYSVKTYQANFPNTLIFGD------IAKIKTQDIPDHDVLLAGFPCQ 77
EC SEINP + +TY+ ++ + KI D PD DV+L GFPCQ
Sbjct: 25 KLGGECVGYSEINPKAKRTYRMLHELDTLWEPQLDLGDLTKINPNDAPDFDVMLGGFPCQ 84
Query: 78 PFSQAG 83
FS G
Sbjct: 85 TFSIVG 90
>gi|163855343|ref|YP_001629641.1| putative DNA-cytosine methyltransferase [Bordetella petrii DSM
12804]
gi|163259071|emb|CAP41370.1| putative DNA-cytosine methyltransferase [Bordetella petrii]
Length = 197
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----AKI 59
+ GI + +E + +EI P+ +P GD+ ++
Sbjct: 16 YGSVCSGI----EAASLAWQPLGLEAAWFAEIEPFPSAVLAHRYPRVPNLGDMAAIARQV 71
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +P D+L+ G PCQ FS AG
Sbjct: 72 RAGTVPAPDILVGGTPCQSFSVAG 95
>gi|33338827|gb|AAQ14149.1| Dmt, incomplete [Enterobacteria phage P1]
Length = 638
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----I 59
+ GI + + + +EI P+ +P+ GD+ K +
Sbjct: 6 YGSVCSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLAHRWPHVANLGDMTKLAKKV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+I DVL+ G PCQ FS AG
Sbjct: 62 LAGEIESPDVLVWGTPCQAFSIAG 85
>gi|71903439|ref|YP_280242.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS6180]
gi|94988546|ref|YP_596647.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS9429]
gi|94992369|ref|YP_600468.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS2096]
gi|71802534|gb|AAX71887.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS6180]
gi|94542054|gb|ABF32103.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS9429]
gi|94545877|gb|ABF35924.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS2096]
Length = 110
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
++ DLF GIGG RL L ++ EC EI+ ++ ++Y + F DI ++
Sbjct: 4 MQFLDLFAGIGGFRLGL----INQCHECIGFCEIDKFARQSYKAIYETEGEIEFHDIRQV 59
Query: 60 KTQDI----PDHDVLLAGF 74
QD D++ GF
Sbjct: 60 TDQDFRQLRGQVDIICGGF 78
>gi|302782830|ref|XP_002973188.1| hypothetical protein SELMODRAFT_98974 [Selaginella
moellendorffii]
gi|300158941|gb|EFJ25562.1| hypothetical protein SELMODRAFT_98974 [Selaginella
moellendorffii]
Length = 334
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--I 59
L++ + + GIGG+R LE+ V F EIN + Y+ NF + G+I + +
Sbjct: 4 LRVLEFYSGIGGLRFSLEEAKIDAMVVEVF--EINELANDVYERNFGHRPNQGNIQRLSV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
D + D L PCQP+++ G
Sbjct: 62 SDLDKYEADAWLLSPPCQPYTRQG 85
>gi|196037189|ref|ZP_03104504.1| modification methylase HaeIII [Bacillus cereus W]
gi|195990293|gb|EDX54346.1| modification methylase HaeIII [Bacillus cereus W]
Length = 415
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 24/106 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV------------------------ECFFSSEINP 37
+ I LF G GG+ L +E + +S+++
Sbjct: 63 MNIVSLFSGAGGLDLGVELSSMVVQFGEEKAYRAFENKEDYLKLRSIVKSNFVYSNDMFT 122
Query: 38 YSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ TY NF T+ K + P+ +++L GFPC FS +G
Sbjct: 123 SANLTYVNNFAPTVTKVAKDIRKVAEFPNCNLMLGGFPCPGFSSSG 168
>gi|309789600|ref|ZP_07684181.1| BsaWI methylase [Oscillochloris trichoides DG6]
gi|308228336|gb|EFO81983.1| BsaWI methylase [Oscillochloris trichoides DG6]
Length = 436
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 15/92 (16%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++F G GG+ L L + E VKTY+ N P T++ D + T
Sbjct: 15 TAFEMFTGPGGLSLGL----RSSGFHVVGAVEKVESCVKTYRRNHPETIVIHDDVRNITS 70
Query: 63 DI-----------PDHDVLLAGFPCQPFSQAG 83
+ D++ G PC+ FS AG
Sbjct: 71 EQVISIVLKVTGKKTVDLVAGGPPCETFSTAG 102
>gi|121583544|ref|YP_973963.1| DNA-cytosine methyltransferase [Polaromonas naphthalenivorans CJ2]
gi|120596788|gb|ABM40221.1| DNA-cytosine methyltransferase [Polaromonas naphthalenivorans CJ2]
Length = 373
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 11/86 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
++ DLFCG GG+ L V +++ Y+AN D+ +
Sbjct: 24 IEAIDLFCGAGGLSCGL----KKVGVRVVAGIDVDAACQYPYEANHRGAKFLLQDVTTLT 79
Query: 61 TQDIPDHD------VLLAGFPCQPFS 80
D+ +L PCQPFS
Sbjct: 80 GADLEALWSPTSVRLLAGCAPCQPFS 105
>gi|326428358|gb|EGD73928.1| hypothetical protein PTSG_05624 [Salpingoeca sp. ATCC 50818]
Length = 512
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----IA 57
L++ + + GIGG+ L+ + +IN + K Y+ NFP T ++ I
Sbjct: 18 LRVLEFYSGIGGMHAALKVA--DPTARVLRAFDINDTANKVYRHNFPETPVWQRLIESIP 75
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + + D+ L PCQPF++ G
Sbjct: 76 RERFEGKLQADMYLMSPPCQPFTRTG 101
>gi|326385181|ref|ZP_08206848.1| C-5 cytosine-specific DNA methylase [Gordonia neofelifaecis NRRL
B-59395]
gi|326196085|gb|EGD53292.1| C-5 cytosine-specific DNA methylase [Gordonia neofelifaecis NRRL
B-59395]
Length = 425
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I DLF G GG+ + E + +V+T +A ++++
Sbjct: 2 IVDLFAGPGGLDVAAHWLDVPS-----IGIEFDENAVETREAAGLSSILGDVTRWRPEDF 56
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
+VL G PCQ ++ AG
Sbjct: 57 TDSVNVLTGGPPCQTYTVAG 76
>gi|162461489|ref|NP_001105173.1| DNA methyl transferase4 [Zea mays]
gi|13936240|gb|AAK40306.1| DNA methyltransferase ZMET4 [Zea mays]
gi|194697288|gb|ACF82728.1| unknown [Zea mays]
Length = 357
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ + + GIGG+R L + E + +IN + Y+ NF + G+I +
Sbjct: 8 RVLEFYSGIGGLRYSLMASGVRA--EVVEAFDINDVANDVYEHNFGHRPCQGNIQTLTAS 65
Query: 63 --DIPDHDVLLAGFPCQPFSQAG 83
D L PCQP+++ G
Sbjct: 66 DLDKYKAHAWLLSPPCQPYTRQG 88
>gi|218134945|ref|ZP_03463749.1| hypothetical protein BACPEC_02850 [Bacteroides pectinophilus ATCC
43243]
gi|217990330|gb|EEC56341.1| hypothetical protein BACPEC_02850 [Bacteroides pectinophilus ATCC
43243]
Length = 416
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 30/130 (23%), Gaps = 52/130 (40%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--IFGDIAKI 59
L DLF G GG+ E+N ++ KT + G I
Sbjct: 6 LNYIDLFAGAGGLSEGF----IQSGYRPVAHVEMNEHAAKTIETRIAYYYLKDNGKIKSY 61
Query: 60 KTQDIP----------------------------------------------DHDVLLAG 73
+ DV++ G
Sbjct: 62 YDYEKGKITREQLLEKIPKEELKTVINKEMSESTIKGIFNTIDDIKREKEIDKIDVIIGG 121
Query: 74 FPCQPFSQAG 83
PCQ +S G
Sbjct: 122 PPCQAYSLVG 131
>gi|210610975|ref|ZP_03288684.1| hypothetical protein CLONEX_00874 [Clostridium nexile DSM 1787]
gi|210152200|gb|EEA83207.1| hypothetical protein CLONEX_00874 [Clostridium nexile DSM 1787]
Length = 423
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 30/130 (23%), Gaps = 52/130 (40%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--IFGDIAKI 59
L DLF G GG+ E+N ++ KT + G I
Sbjct: 6 LNYIDLFAGAGGLSEGF----IQSGYRPVAHVEMNEHAAKTIETRIAYYYLKDNGKIKSY 61
Query: 60 KTQDIP----------------------------------------------DHDVLLAG 73
+ DV++ G
Sbjct: 62 YDYEKGKITREQLLEKIPKEELKTVINKEMSESTIKGIFNTIDDIKREKEIDKIDVIIGG 121
Query: 74 FPCQPFSQAG 83
PCQ +S G
Sbjct: 122 PPCQAYSLVG 131
>gi|159122489|gb|EDP47610.1| C-5 cytosine methyltransferase DmtA [Aspergillus fumigatus A1163]
Length = 628
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60
D FCG GG+ + H ++ + + ++ TY+ NF DI
Sbjct: 324 YTFGDGFCGAGGVSCGASKAGLH----IKWAFDKSENAITTYRLNFATAVCEACDIFCFL 379
Query: 61 TQDIP--DHDVLLAGFPCQPFSQA 82
T + DV PCQ FS A
Sbjct: 380 TNKLEELKVDVSHGSPPCQTFSPA 403
>gi|160894869|ref|ZP_02075643.1| hypothetical protein CLOL250_02419 [Clostridium sp. L2-50]
gi|156863300|gb|EDO56731.1| hypothetical protein CLOL250_02419 [Clostridium sp. L2-50]
Length = 423
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 30/130 (23%), Gaps = 52/130 (40%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--IFGDIAKI 59
L DLF G GG+ E+N ++ KT + G I
Sbjct: 6 LNYIDLFAGAGGLSEGF----IQSGYRPVAHVEMNEHAAKTIETRIAYYYLKDNGKIKSY 61
Query: 60 KTQDIP----------------------------------------------DHDVLLAG 73
+ DV++ G
Sbjct: 62 YDYEKGKITREQLLEKIPKEELKTVINQEMSESTIKGIFNTIDDIKREKEIDKIDVIIGG 121
Query: 74 FPCQPFSQAG 83
PCQ +S G
Sbjct: 122 PPCQAYSLVG 131
>gi|241832196|ref|XP_002414890.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
gi|215509102|gb|EEC18555.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
Length = 361
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
L++ +L+ GIGG+ + ++N + L+ ++ +
Sbjct: 19 LRVLELYSGIGGMH----FACPPDKTRVVAAVDVNTTANATYAFNFPETRLLQRNVQSLT 74
Query: 61 TQ--DIPDHDVLLAGFPCQPFSQAG 83
+ D DVL PCQPF++ G
Sbjct: 75 ARELDALRPDVLTMSPPCQPFTRQG 99
>gi|237720893|ref|ZP_04551374.1| DNA-cytosine methyltransferase [Bacteroides sp. 2_2_4]
gi|229449728|gb|EEO55519.1| DNA-cytosine methyltransferase [Bacteroides sp. 2_2_4]
Length = 370
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------ 56
K+ F GG + + + +EI+P +K Y+ N + +
Sbjct: 36 KVFSCFACGGGSTMGYKIA----GYDVIGCNEIDPRMMKCYETNHHPQYSYLEDIRDLVK 91
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+++ + D+L PC FS +G
Sbjct: 92 RNYLPEELYNLDILDGSPPCSTFSMSG 118
>gi|70984380|ref|XP_747703.1| C-5 cytosine methyltransferase DmtA [Aspergillus fumigatus Af293]
gi|66845330|gb|EAL85665.1| C-5 cytosine methyltransferase DmtA [Aspergillus fumigatus Af293]
Length = 628
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60
D FCG GG+ + H ++ + + ++ TY+ NF DI
Sbjct: 324 YTFGDGFCGAGGVSCGASKAGLH----IKWAFDKSENAITTYRLNFATAVCEACDIFCFL 379
Query: 61 TQDIP--DHDVLLAGFPCQPFSQA 82
T + DV PCQ FS A
Sbjct: 380 TNKLEELKVDVSHGSPPCQTFSPA 403
>gi|15644685|ref|NP_206855.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori 26695]
gi|2313132|gb|AAD07124.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori 26695]
Length = 823
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 29/99 (29%), Gaps = 22/99 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
L LF G G L EC ++EI + + N L I+
Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEILEKRLNIQRINRKCKLDESYISGDIK 62
Query: 58 --------------KIKTQDIPDHDVLLAGFPCQPFSQA 82
K D+++A PCQ S A
Sbjct: 63 KPETKEKILKQIEFYSKKFGNDRVDLVVATPPCQGMSVA 101
>gi|296206224|ref|XP_002750114.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase isoform 3
[Callithrix jacchus]
Length = 345
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI- 59
L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYRFNFPHTQLLAKTIEGIT 61
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQ 81
+ D D++L PCQPF++
Sbjct: 62 LQEFDRLSFDMILMSPPCQPFTR 84
>gi|296206222|ref|XP_002750113.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase isoform 2
[Callithrix jacchus]
Length = 367
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI- 59
L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYRFNFPHTQLLAKTIEGIT 61
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQ 81
+ D D++L PCQPF++
Sbjct: 62 LQEFDRLSFDMILMSPPCQPFTR 84
>gi|72255517|ref|NP_001026813.1| tRNA (cytosine-5-)-methyltransferase [Rattus norvegicus]
gi|115311703|sp|Q4G073|TRDMT_RAT RecName: Full=tRNA (cytosine-5-)-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2
gi|71051331|gb|AAH98700.1| TRNA aspartic acid methyltransferase 1 [Rattus norvegicus]
gi|149021112|gb|EDL78719.1| DNA methyltransferase 2 [Rattus norvegicus]
Length = 391
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI- 59
L++ +L+ GIGG+ L ++ + +++ + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGIGGMHHALRESRVPA--HVVAAIDVSTVANEVYKHNFPHTHLLAKTIEGIS 61
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D +++L PCQPF++ G
Sbjct: 62 LEEFDKLSFNMILMSPPCQPFTRIG 86
>gi|46401691|ref|YP_006537.1| Dmt [Enterobacteria phage P1]
gi|33338718|gb|AAQ14041.1| Dmt [Enterobacteria phage P1]
Length = 754
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----I 59
+ GI + + + +EI P+ +P+ GD+ K +
Sbjct: 6 YGSVCSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLAHRWPHVANLGDMTKLAKKV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+I DVL+ G PCQ FS AG
Sbjct: 62 LAGEIESPDVLVWGTPCQAFSIAG 85
>gi|218556814|ref|YP_002389728.1| putative modification methylase NmeDIP [Escherichia coli IAI1]
gi|218363583|emb|CAR01240.1| putative modification methylase NmeDIP [Escherichia coli IAI1]
Length = 379
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 30/98 (30%), Gaps = 22/98 (22%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--------FPNTLIFGD 55
I F G G + L E E F +E + + Y+ +
Sbjct: 8 IFSFFSGSGFLDLGFE----KNGYEVVFVNEYHAPFMDAYKHSRKKLNIAPPRFGYAECS 63
Query: 56 IAKIKTQDIPDHDV----------LLAGFPCQPFSQAG 83
I ++ + I + + G PC FS AG
Sbjct: 64 IEDVEHEKIKSSMLQLKNEGRLTGFIGGPPCPDFSVAG 101
>gi|152982884|ref|YP_001351698.1| site-specific DNA methylase [Janthinobacterium sp. Marseille]
gi|151282961|gb|ABR91371.1| Site-specific DNA methylase [Janthinobacterium sp. Marseille]
Length = 425
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN--PYSVKTYQANFPNTLIFGDIAKIKT 61
+ F G GG+ + C F+++ + V + L+ D+ KI T
Sbjct: 48 FFEFFAG-GGMA----RAGLGERWNCQFANDNSAMKGQVYRKNWHGGPELVIEDVNKITT 102
Query: 62 QD-IPDHDVLLAGFPCQPFSQAG 83
+ D++ A FPCQ S AG
Sbjct: 103 RHLSGTPDLIWASFPCQDLSLAG 125
>gi|163855756|ref|YP_001630054.1| putative DNA-cytosine methyltransferase [Bordetella petrii DSM
12804]
gi|163259484|emb|CAP41784.1| putative DNA-cytosine methyltransferase [Bordetella petrii]
Length = 201
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----AKI 59
+ GI + + +E + +EI P+ +P+ GD+ ++
Sbjct: 20 YGSVCSGI----EAVSLAWQPLGLEAAWFAEIEPFPSAVLAHRYPHVPNLGDMTAIARQV 75
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +P D+L+ G PCQ FS AG
Sbjct: 76 RAGTVPAPDILVGGTPCQSFSVAG 99
>gi|317011769|gb|ADU85516.1| site-specific DNA-methyltransferase [Helicobacter pylori
SouthAfrica7]
Length = 166
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF---------PNTLI 52
+ + F G GG L + + + ++I+ ++KT N +
Sbjct: 3 YNVCEFFVGAGGSHLGF----IQQGFKTLYVNDIDKDALKTLLHNNKELKDAIIDQTSST 58
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D K++ Q + DV+ AG C+ FS AG
Sbjct: 59 EIDPKKLQAQIKQEIDVIFAGIVCKSFSLAG 89
>gi|256379578|ref|YP_003103238.1| C-5 cytosine-specific DNA methylase [Actinosynnema mirum DSM
43827]
gi|255923881|gb|ACU39392.1| C-5 cytosine-specific DNA methylase [Actinosynnema mirum DSM
43827]
Length = 496
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKI 59
ML TDLFCG GG L ++ ++ +P +++T+ NFP+ DI+++
Sbjct: 1 MLTATDLFCGAGGSGLG---ATAVPGIQLVMAANHSPRAIETHATNFPHCQHDCADISQV 57
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ ++L A C + A
Sbjct: 58 VPRRYRRTNILWASPECTNHTTA 80
>gi|114629604|ref|XP_001151712.1| PREDICTED: DNA methyltransferase 2 isoform 2 [Pan troglodytes]
gi|119606625|gb|EAW86219.1| hCG23994, isoform CRA_c [Homo sapiens]
gi|167887562|gb|ACA05986.1| tRNA aspartic acid methyltransferase 1 variant 1 [Homo sapiens]
Length = 345
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 61 --TQDIPDHDVLLAGFPCQPFSQ 81
D D++L PCQPF++
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTR 84
>gi|114629602|ref|XP_001151777.1| PREDICTED: DNA methyltransferase 2 isoform 3 [Pan troglodytes]
gi|119606624|gb|EAW86218.1| hCG23994, isoform CRA_b [Homo sapiens]
gi|167887560|gb|ACA05984.1| tRNA aspartic acid methyltransferase 1 variant 2 [Homo sapiens]
Length = 367
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 61 --TQDIPDHDVLLAGFPCQPFSQ 81
D D++L PCQPF++
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTR 84
>gi|302419495|ref|XP_003007578.1| RIP defective [Verticillium albo-atrum VaMs.102]
gi|261353229|gb|EEY15657.1| RIP defective [Verticillium albo-atrum VaMs.102]
Length = 909
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 29/85 (34%), Gaps = 8/85 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIK 60
+ D FCG GG+ E++ H ++ + + + DI
Sbjct: 319 YTLFDAFCGAGGVSRGAERSGLH----VRYAVDVWDKACSSMRMNFPDTEVFETDIYGFV 374
Query: 61 TQDIPD---HDVLLAGFPCQPFSQA 82
T DV+ PCQ +S A
Sbjct: 375 TSTDGRVITADVVHLSPPCQFWSPA 399
>gi|308183853|ref|YP_003927986.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori SJM180]
gi|308059773|gb|ADO01669.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori SJM180]
Length = 822
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 28/99 (28%), Gaps = 22/99 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
L LF G G EC ++EI + + N L I+
Sbjct: 7 LTYISLFSGAGVGCYGF----LEEGFECIATNEILEKRLNIQRINRKCKLDESYISGDIK 62
Query: 58 --------------KIKTQDIPDHDVLLAGFPCQPFSQA 82
K D+++A PCQ S A
Sbjct: 63 KPETKEKILKQIEFYSKKFGNDRVDLVVATPPCQGMSVA 101
>gi|308229535|gb|ADO24183.1| M.AscI [Arthrobacter sp. NEB 688]
Length = 400
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 29/82 (35%), Gaps = 5/82 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKT 61
+ F G+G I L C +++ +P + DI +
Sbjct: 15 TFVEYFAGVGLIHEAL----RPLGWTCQLANDNDPKKVRAYEANYPNVPVSALDIRDLSA 70
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DIP + A FPC SQAG
Sbjct: 71 SDIPPATLATASFPCIDLSQAG 92
>gi|154302575|ref|XP_001551697.1| hypothetical protein BC1G_09864 [Botryotinia fuckeliana B05.10]
gi|150855353|gb|EDN30545.1| hypothetical protein BC1G_09864 [Botryotinia fuckeliana B05.10]
Length = 1126
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 29/93 (31%), Gaps = 16/93 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53
D FCG GG + + + + ++ T++ NFP +
Sbjct: 731 YTYGDAFCGAGGTTRGAVMA----GLRVKWGFDFDQHACTTWRLNFPGATCYEMSSERFV 786
Query: 54 ----GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ D+L PCQ FS A
Sbjct: 787 SLATPSPCSSNIPNDVKVDILHLSPPCQYFSPA 819
>gi|254518451|ref|ZP_05130507.1| DNA-cytosine methyltransferase [Clostridium sp. 7_2_43FAA]
gi|226912200|gb|EEH97401.1| DNA-cytosine methyltransferase [Clostridium sp. 7_2_43FAA]
Length = 413
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 33/127 (25%), Gaps = 49/127 (38%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF G GG+ + + + F E++ + T Q + +
Sbjct: 7 MYCIDLFAGAGGLSEGFQ----RKGFKFFAHVEMDKAACMTLQTRQAFYFLKRNRRLYIY 62
Query: 62 QDI---------------------------------------------PDHDVLLAGFPC 76
+ + DV++ G PC
Sbjct: 63 ESYLRGEISREELYSNVPNRIFKSIINAEINEDTIEDVFEKIDENRRNREVDVIIGGPPC 122
Query: 77 QPFSQAG 83
Q +S G
Sbjct: 123 QAYSVIG 129
>gi|327309192|ref|XP_003239287.1| hypothetical protein TERG_01268 [Trichophyton rubrum CBS 118892]
gi|326459543|gb|EGD84996.1| hypothetical protein TERG_01268 [Trichophyton rubrum CBS 118892]
Length = 622
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
D FCG GG+ +Q ++ ++ + + ++ +Y+ANFP+ L
Sbjct: 316 YTFGDGFCGAGGVSRGAQQA----GLKLSWAFDKSESAINSYRANFPSCLTKHSEVAQFL 371
Query: 62 QDIPDH---DVLLAGFPCQPFSQA 82
+P DV+ PCQPFS A
Sbjct: 372 TSLPREILVDVMHVSPPCQPFSPA 395
>gi|157165013|ref|YP_001467403.1| glutathionylspermidine synthase family protein [Campylobacter
concisus 13826]
gi|112801055|gb|EAT98399.1| conserved hypothetical protein [Campylobacter concisus 13826]
gi|158605014|gb|ABW74816.1| conserved hypothetical protein [Campylobacter concisus 13826]
Length = 203
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIK 60
+KI +LF GIGG RL + + E +P + + + +I GD
Sbjct: 1 MKILNLFAGIGGNRLLWDNVLPGVK---VTAVEFDPEIAKAYAKRYPNDNVIVGDAWDYA 57
Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81
++ D D + A PCQ S+
Sbjct: 58 AKNYLDFDFIWASPPCQTHSR 78
>gi|71899200|ref|ZP_00681363.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Ann-1]
gi|71731058|gb|EAO33126.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Ann-1]
Length = 387
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT--- 61
DLFCG+GG+ L + +I+P ++AN + D+A++K
Sbjct: 17 VDLFCGVGGLTHGL----ARGGISVAAGIDIDPNCQFPFEANNAALFLECDVARLKAAAV 72
Query: 62 ---QDIPDHDVLLAGFPCQPFS 80
D +L PCQPFS
Sbjct: 73 KGFYQAADITLLAGCAPCQPFS 94
>gi|329113622|ref|ZP_08242401.1| Modification methylase HpaII [Acetobacter pomorum DM001]
gi|326697068|gb|EGE48730.1| Modification methylase HpaII [Acetobacter pomorum DM001]
Length = 389
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 8/83 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN--PYSVKTYQANFPNTLIFGDIAK 58
M + F G GG+ + C F+++ + L GD+
Sbjct: 8 MPSFYEFFAG-GGMA----RAGLGDGWTCLFANDFDHKKGLSYQANWGTGGELRVGDVND 62
Query: 59 IKTQDIP-DHDVLLAGFPCQPFS 80
++ +D+P D++ FPCQ S
Sbjct: 63 VRVEDLPGVADLVWGSFPCQDLS 85
>gi|254413124|ref|ZP_05026896.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
gi|196180288|gb|EDX75280.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
Length = 416
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 29/106 (27%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA-----------NFPNTL 51
K+ F G G + L E + + + +EINP ++ Y+ +
Sbjct: 6 KLFSFFAGTGFLDLGFEAS----GFDIVYVNEINPSYMEAYRYSRQVLNLPLPEYGYHYA 61
Query: 52 IFGDIAKIKTQD------------IPDHDVL--LAGFPCQPFSQAG 83
G+I ++ + D++ + G PC FS G
Sbjct: 62 DNGNIEQLTEGEKALRLWYLIQDARKSTDIVGFIGGPPCPDFSVGG 107
>gi|126433434|ref|YP_001069125.1| DNA-cytosine methyltransferase [Mycobacterium sp. JLS]
gi|126233234|gb|ABN96634.1| DNA-cytosine methyltransferase [Mycobacterium sp. JLS]
Length = 349
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANF-PNTLIFGDIAKIKTQDIPDHDVLLAGFPC 76
+ F + + FS E+N ++ TY ANF + + +GDI + ++P DV++ G PC
Sbjct: 1 MTAGFKPQGFDPVFSVELNLHAAATYAANFGEDHIFWGDIDEALKGEVPHADVVIGGPPC 60
Query: 77 QPFSQAG 83
Q FS G
Sbjct: 61 QGFSNLG 67
>gi|121593710|ref|YP_985606.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42]
gi|121593834|ref|YP_985730.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42]
gi|120605790|gb|ABM41530.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42]
gi|120605914|gb|ABM41654.1| C-5 cytosine-specific DNA methylase [Acidovorax sp. JS42]
Length = 539
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----AKI 59
+ GI + + +E + +EI P+ +P GD+ ++
Sbjct: 19 YGSVCSGI----EAVSLAWQPIGLEAAWFAEIEPFPSAVLAHRYPRVPNLGDMTAIARQV 74
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +P D+L+ G PCQ FS AG
Sbjct: 75 RAGTVPAPDILVGGTPCQSFSVAG 98
>gi|294084926|ref|YP_003551686.1| DNA-cytosine methyltransferase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664501|gb|ADE39602.1| DNA-cytosine methyltransferase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 393
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 19/97 (19%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI 59
+ + F G GG + + ++E P +V+TY+ N+P+T++ DI KI
Sbjct: 27 LFTVVSTFAGGGGSSTGYKLA----GGKVLAANEFVPEAVETYKQNYPDTIVDSSDIRKI 82
Query: 60 --------------KTQDIPDHDVLLAGFPCQPFSQA 82
+ + D+L PC FS+A
Sbjct: 83 TGSKKEGVLSWFRSFGVEQGELDILDGSPPCATFSKA 119
>gi|145250405|ref|XP_001396716.1| C-5 cytosine methyltransferase DmtA [Aspergillus niger CBS 513.88]
gi|134082235|emb|CAL00990.1| unnamed protein product [Aspergillus niger]
Length = 613
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
D FCG GG+ + + ++ + + +++ TY+ NF +
Sbjct: 306 YTFGDGFCGAGGVSCGALKA----GLRPTWAFDNSRHAINTYRLNFRDAECEDSDVFTFL 361
Query: 62 QDIPDH---DVLLAGFPCQPFSQA 82
+ DV PCQ FS A
Sbjct: 362 TNDYAFLKVDVTHGSPPCQTFSPA 385
>gi|302654293|ref|XP_003018954.1| C-5 cytosine methyltransferase DmtA [Trichophyton verrucosum HKI
0517]
gi|291182644|gb|EFE38309.1| C-5 cytosine methyltransferase DmtA [Trichophyton verrucosum HKI
0517]
Length = 582
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
D FCG GG+ +Q ++ ++ + + ++ +Y+ANFP+ L
Sbjct: 276 YTFGDGFCGAGGVSRGAQQA----GLKLSWAFDKSESAINSYRANFPSCLAEHSEVAQFL 331
Query: 62 QDIPDH---DVLLAGFPCQPFSQA 82
+P DV+ PCQPFS A
Sbjct: 332 TSLPRELLVDVMHVSPPCQPFSPA 355
>gi|302504717|ref|XP_003014317.1| C-5 cytosine methyltransferase DmtA [Arthroderma benhamiae CBS
112371]
gi|291177885|gb|EFE33677.1| C-5 cytosine methyltransferase DmtA [Arthroderma benhamiae CBS
112371]
Length = 644
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
D FCG GG+ +Q ++ ++ + + ++ +Y+ANFP+ L
Sbjct: 277 YTFGDGFCGAGGVSRGAQQA----GLKLSWAFDKSESAINSYRANFPSCLAEHSEVAQFL 332
Query: 62 QDIPDH---DVLLAGFPCQPFSQA 82
+P DV+ PCQPFS A
Sbjct: 333 TSLPRELLVDVMHVSPPCQPFSPA 356
>gi|329938281|ref|ZP_08287732.1| DNA-cytosine methyltransferase [Streptomyces griseoaurantiacus
M045]
gi|329302770|gb|EGG46660.1| DNA-cytosine methyltransferase [Streptomyces griseoaurantiacus
M045]
Length = 367
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61
I L G GG+ + + +E +P++ + P GDI +
Sbjct: 16 TILALCAGYGGLEAAIR---ARIGGQVAAYAENDPHAATVFAHRHPGVPNLGDIRAVDWD 72
Query: 62 --QDIPDHDVLLAGFPCQPFSQAG 83
+D+ DV+ AGFPC+ S AG
Sbjct: 73 RVRDVFRPDVIGAGFPCRNTSNAG 96
>gi|228950284|ref|ZP_04112461.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228809446|gb|EEM55890.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 346
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
L + F GG + + + +I+P + P DI + K
Sbjct: 20 LNVFSCFACGGGSTMGYKLA----GCTVLGNCDIDPQMVALYQNNHKPRYSYCMDIREFK 75
Query: 61 -------TQDIPDHDVLLAGFPCQPFSQAG 83
++ + D+L PC FS AG
Sbjct: 76 DIPNAKLPAELFNLDILDGSPPCSSFSTAG 105
>gi|326779115|ref|ZP_08238380.1| DNA-cytosine methyltransferase [Streptomyces cf. griseus XylebKG-1]
gi|326659448|gb|EGE44294.1| DNA-cytosine methyltransferase [Streptomyces cf. griseus XylebKG-1]
Length = 433
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 32/114 (28%), Gaps = 36/114 (31%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA-------NFPNTLIFG 54
L ++ G GG + L Q + EI+ ++ +T +
Sbjct: 8 LTSIEICAGAGGQAIGLHQA----GFKHLALVEIDKHAAETLEWNIKRRESWSWEREYCD 63
Query: 55 DIAKIKTQDIPDH-------------------------DVLLAGFPCQPFSQAG 83
I+ P D+L G PC PFS AG
Sbjct: 64 VISDDVNNFRPIPSDDIQDSGLDKPVKFLGRQLRRGDLDLLAGGVPCPPFSHAG 117
>gi|168056113|ref|XP_001780066.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668469|gb|EDQ55075.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 346
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 32/94 (34%), Gaps = 14/94 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ LF GIGG + L + NV E+ P + N D+
Sbjct: 218 IKVLSLFSGIGGAEVALHKIGIKLNVVVSVEIELEPRRCLQTWWSVTNQTGHLDVEYHDV 277
Query: 62 QD------------IPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PC F AG
Sbjct: 278 RHLTKSVLTRLVNKYQGFDLIVGGSPCNNF--AG 309
>gi|315636653|ref|ZP_07891886.1| modification methylase Eco47II [Arcobacter butzleri JV22]
gi|315479079|gb|EFU69779.1| modification methylase Eco47II [Arcobacter butzleri JV22]
Length = 411
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKI 59
+ K +LF L +E +EI+ Y+ + + D++KI
Sbjct: 72 VYKSIELF----AGAGGLALGLEKAGIEHILLNEIDKYAVQTLKRNRPHWKIEHSDVSKI 127
Query: 60 KTQDIPDH-DVLLAGFPCQPFSQAG 83
+ D+L GFPCQ FS AG
Sbjct: 128 DFTSYKNKIDLLTGGFPCQAFSYAG 152
>gi|300791025|ref|YP_003771316.1| DNA (cytosine-5-)-methyltransferase [Amycolatopsis mediterranei
U32]
gi|299800539|gb|ADJ50914.1| DNA (cytosine-5-)-methyltransferase [Amycolatopsis mediterranei
U32]
Length = 435
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
++ +L G GG L LE+ + + E++ + T Q N P + + +
Sbjct: 10 YEVVELCAGAGGQALGLERA----GFKHRLAVELDSNAFTTLQTNIPGKIEINEEEREIV 65
Query: 59 ----------IKTQDIPDHDVLLAGFPCQPFSQAG 83
+D + +L G PC PF+ AG
Sbjct: 66 QQGDVADPAVFNPEDHREVALLAGGVPCPPFTIAG 100
>gi|115373224|ref|ZP_01460525.1| modification methylase NaeI [Stigmatella aurantiaca DW4/3-1]
gi|115369825|gb|EAU68759.1| modification methylase NaeI [Stigmatella aurantiaca DW4/3-1]
Length = 303
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 25 RNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
E + EI+ ++ T + + D+ D+L G PC PFS AG
Sbjct: 2 AGFEHVAAVEIDKHACATLRLNRPQWRVFEEDLKDFSGSSFRGVDLLAGGVPCPPFSIAG 61
>gi|228947350|ref|ZP_04109643.1| hypothetical protein bthur0007_34800 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228812349|gb|EEM58677.1| hypothetical protein bthur0007_34800 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 290
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 16 LDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKIKTQDIPDHDVLLAG 73
+ +EQ +C E + ++ K+Y + + DI+ I ++IP D G
Sbjct: 1 MGMEQA----GHKCLGYVEWDKFARKSYEAIHDTGEEWTWNDISTIDYRNIPKSDCWTFG 56
Query: 74 FPCQPFSQAG 83
FPCQ S G
Sbjct: 57 FPCQDISIGG 66
>gi|237714171|ref|ZP_04544652.1| site-specific DNA-methyltransferase [Bacteroides sp. D1]
gi|262408451|ref|ZP_06084998.1| site-specific DNA-methyltransferase [Bacteroides sp. 2_1_22]
gi|294644481|ref|ZP_06722241.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CC 2a]
gi|229445663|gb|EEO51454.1| site-specific DNA-methyltransferase [Bacteroides sp. D1]
gi|262354003|gb|EEZ03096.1| site-specific DNA-methyltransferase [Bacteroides sp. 2_1_22]
gi|292640172|gb|EFF58430.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CC 2a]
Length = 250
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 26 NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI-PDHDVLLAGFPCQPFSQAG 83
+ F EI+ + F + + D+ ++ +VL GFPCQPFS AG
Sbjct: 2 GWQNAFHCEIDDFCNTILNYWFKDAKSYTDVTTTDFREWRGKINVLTGGFPCQPFSVAG 60
>gi|237718974|ref|ZP_04549455.1| site-specific DNA-methyltransferase [Bacteroides sp. 2_2_4]
gi|229451752|gb|EEO57543.1| site-specific DNA-methyltransferase [Bacteroides sp. 2_2_4]
Length = 250
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 26 NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI-PDHDVLLAGFPCQPFSQAG 83
+ F EI+ + F + + D+ ++ +VL GFPCQPFS AG
Sbjct: 2 GWQNAFHCEIDDFCNTILNYWFKDAKSYTDVTTTDFREWRGKINVLTGGFPCQPFSVAG 60
>gi|15838375|ref|NP_299063.1| DNA methyltransferase [Xylella fastidiosa 9a5c]
gi|9106848|gb|AAF84583.1|AE003999_11 DNA methyltransferase [Xylella fastidiosa 9a5c]
Length = 537
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----AKI 59
+ GI + + +E + +EI P+ +P GD+ ++
Sbjct: 19 YGSVCSGI----EAVSLAWQPLGLEAAWFAEIEPFPSAVLAHRYPRVPNLGDMTAIARQV 74
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +P D+L+ G PCQ FS AG
Sbjct: 75 RAGTVPAPDILVGGTPCQSFSVAG 98
>gi|326776070|ref|ZP_08235335.1| DNA-cytosine methyltransferase [Streptomyces cf. griseus XylebKG-1]
gi|326656403|gb|EGE41249.1| DNA-cytosine methyltransferase [Streptomyces cf. griseus XylebKG-1]
Length = 463
Score = 53.8 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 29/106 (27%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK--------------------- 41
+LF G GG+ + + + +E N + +
Sbjct: 15 TSVELFAGGGGLAMGVHRA----GFRPLLFNEFNNRACETLIASAGRVLGDSGLALIQDT 70
Query: 42 ---TYQANFPNTLIFGDIAKIKTQDI-PDHDVLLAGFPCQPFSQAG 83
P L GD+ ++ + + DVL G PCQPFS G
Sbjct: 71 APVPPGPGEPAPLYPGDVRELDLRKFEGEVDVLAGGPPCQPFSAGG 116
>gi|218709639|ref|YP_002417260.1| cytosine-specific methyltransferase HgiDII; restriction system
[Vibrio splendidus LGP32]
gi|218322658|emb|CAV18834.1| Cytosine-specific methyltransferase HgiDII; restriction system
[Vibrio splendidus LGP32]
Length = 355
Score = 53.8 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 10/83 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT--- 61
DLFCG GG+ L+Q ++ ++ Y+ N + ++ +
Sbjct: 10 VDLFCGAGGLTHGLQQA----GIDVRAGFDLESTCKFPYEHNNQAEFVQKSVSDLTGKDI 65
Query: 62 ---QDIPDHDVLLAGFPCQPFSQ 81
D + +L PCQPFS+
Sbjct: 66 VSRFDEHAYTLLAGCAPCQPFSK 88
>gi|308183975|ref|YP_003928108.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180]
gi|308059895|gb|ADO01791.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180]
Length = 414
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 27/120 (22%), Gaps = 44/120 (36%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP------------------YSVKTYQAN 46
DLF G GG+ L T E Y +
Sbjct: 7 IDLFSGAGGLSLGFANTNR---FNILAHIEWEKPMITTLRNDLIKRFKISEYEARKRVIK 63
Query: 47 FPNTLIFGDIAKIKTQDI-----------------------PDHDVLLAGFPCQPFSQAG 83
F I + + DV+ G PCQ +S AG
Sbjct: 64 FDIQKTDELINGSWSDETLKIYGSDNDESVSQFGLNGIISGKKIDVIFGGPPCQAYSLAG 123
>gi|241763153|ref|ZP_04761213.1| C-5 cytosine-specific DNA methylase [Acidovorax delafieldii 2AN]
gi|241367778|gb|EER62032.1| C-5 cytosine-specific DNA methylase [Acidovorax delafieldii 2AN]
Length = 536
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----AKI 59
+ GI + + +E + +EI P+ +P GD+ ++
Sbjct: 19 YGSVCSGI----EAVSLAWQPLGLEAAWFAEIEPFPSAVLAHRYPRVPNLGDMTAIARQV 74
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +P D+L+ G PCQ FS AG
Sbjct: 75 RAGTVPAPDILVGGTPCQSFSVAG 98
>gi|21242948|ref|NP_642530.1| cytosine-specific DNA methyltransferase [Xanthomonas axonopodis
pv. citri str. 306]
gi|21108450|gb|AAM37066.1| cytosine-specific DNA methyltransferase [Xanthomonas axonopodis
pv. citri str. 306]
Length = 487
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
+ + GI + + ++ + SE + ++ +P+ GD+ +
Sbjct: 11 IAYGSVCSGI----EAVSLAWEPLGLKPAWFSETDAFASAVLAHRYPHVPNLGDMTRLAQ 66
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
I+ + +P D+L+ G PCQ FS AG
Sbjct: 67 RIRDRSVPAPDILVGGTPCQSFSVAG 92
>gi|313905794|ref|ZP_07839153.1| DNA-cytosine methyltransferase [Eubacterium cellulosolvens 6]
gi|313469400|gb|EFR64743.1| DNA-cytosine methyltransferase [Eubacterium cellulosolvens 6]
Length = 427
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 30/130 (23%), Gaps = 52/130 (40%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
DLF G GG+ Q E+NPY+ KT + +
Sbjct: 10 YNFIDLFAGAGGLSEGFMQ----VGFSPIAHVEMNPYAAKTLETRTGYFYLKEQGKLNIY 65
Query: 62 QDI------------------------------------------------PDHDVLLAG 73
D DV++ G
Sbjct: 66 YDYLKGNISREKFLEYIPERLLQSVICETMSDESLPELFERIDKSMKEQGISHVDVIIGG 125
Query: 74 FPCQPFSQAG 83
PCQ +S G
Sbjct: 126 PPCQAYSLVG 135
>gi|195873685|ref|ZP_02698511.2| DNA-cytosine methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|195632788|gb|EDX51242.1| DNA-cytosine methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
Length = 382
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 30/99 (30%), Gaps = 23/99 (23%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--IFGDIAKIKT 61
+ F G+G + + + + + +EIN + ++ DI +
Sbjct: 5 VLSFFTGVGLLDMGFRSA----DFDIVWHNEINTDFITGFKHGHSKLYGVNPQDINLFEG 60
Query: 62 QD-----------------IPDHDVLLAGFPCQPFSQAG 83
+ ++ G PC FS AG
Sbjct: 61 SIETISKSIVRENVSSGLIDNNDFGIIGGPPCPDFSNAG 99
>gi|78047961|ref|YP_364136.1| DNA methyltransferase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78036391|emb|CAJ24082.1| DNA methyltransferase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 538
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----AKI 59
+ GI + + +E + +EI P+ +P GD+ ++
Sbjct: 19 YGSVCSGI----EAVSLAWQPIGLEAAWFAEIEPFPSAVLAHRYPRVPNLGDMTAIARQV 74
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +P D+L+ G PCQ FS AG
Sbjct: 75 RAGTVPAPDILVGGTPCQSFSVAG 98
>gi|91784577|ref|YP_559783.1| C-5 cytosine-specific DNA methylase [Burkholderia xenovorans
LB400]
gi|40019222|emb|CAE92946.1| putative DNA methyltransferase [Pseudomonas putida]
gi|91688531|gb|ABE31731.1| C-5 cytosine-specific DNA methylase [Burkholderia xenovorans
LB400]
Length = 533
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----AKI 59
+ GI + + +E + +EI P+ +P+ GD+ ++
Sbjct: 20 YGSVCSGI----EAVSLAWQPLGLEAAWFAEIEPFPSAVLAHRYPHVPNLGDMTAIARQV 75
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +P D+L+ G PCQ FS AG
Sbjct: 76 RAGTVPAPDILVGGTPCQSFSVAG 99
>gi|293395454|ref|ZP_06639738.1| modification methylase HgiDII [Serratia odorifera DSM 4582]
gi|291422138|gb|EFE95383.1| modification methylase HgiDII [Serratia odorifera DSM 4582]
Length = 354
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKI- 59
+ D FCG GG L Q + +++ + +TY+ANFP+ IF DI +
Sbjct: 1 MIAIDFFCGCGGASEGLRQA----GFDVVLGIDVDQQASETYKANFPDADFIFDDIRNVT 56
Query: 60 -------KTQDIPDHDVLLAGFPCQPFSQ 81
D +L A PCQPFSQ
Sbjct: 57 VERVANSIAFKSADGLLLSACAPCQPFSQ 85
>gi|284176374|ref|YP_003406650.1| C-5 cytosine-specific DNA methylase [Haloterrigena turkmenica DSM
5511]
gi|284018031|gb|ADB63977.1| C-5 cytosine-specific DNA methylase [Haloterrigena turkmenica DSM
5511]
Length = 618
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 30/110 (27%), Gaps = 32/110 (29%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFS-----------------------------SEI 35
DLF G GG+ L + + E + +
Sbjct: 9 VDLFAGAGGLSTGLVKAIIDTHAETIAAETGLSPDDLSSSDTRVHWWLAENVELHAVNHW 68
Query: 36 NPYSVKTYQANFPNTLIFGDIAKIKTQD---IPDHDVLLAGFPCQPFSQA 82
P Q + I ++ D + D+L+ G C S+A
Sbjct: 69 EPAIATHEQNHPWAEHYHAKIEELHPPDVVEPGEVDLLVGGPSCTHHSRA 118
>gi|296414683|ref|XP_002837027.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632876|emb|CAZ81218.1| unnamed protein product [Tuber melanosporum]
Length = 939
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----------- 50
+K DLFCG G LE+ ++ ++ +I+ ++ TY+AN N
Sbjct: 534 MKGMDLFCGGGSFGRGLEEGGV---IDMKWAVDIDVPAIATYRANLRNQDTALYLGSVNN 590
Query: 51 LIFGDIAKIKTQ---DIPDHDVLLAGFPCQPFSQA 82
+ I + + D + AG PCQ FS A
Sbjct: 591 YMEDAIRGKYSHLVAHPDEVDFISAGSPCQGFSNA 625
>gi|85710855|ref|ZP_01041916.1| DNA modification methylase M.NGOI [Idiomarina baltica OS145]
gi|85695259|gb|EAQ33196.1| DNA modification methylase M.NGOI [Idiomarina baltica OS145]
Length = 345
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 30/92 (32%), Gaps = 14/92 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
++ G GG L L EI + KT + N +
Sbjct: 11 YTCLEMCAGAGGQALGLHMA----GFRHSALIEIESAACKTLRLNNQEHNLGWQEIIEGD 66
Query: 56 -IAKIKTQ---DIPDHDVLLAGFPCQPFSQAG 83
I ++ D++ G PC PFS+AG
Sbjct: 67 LIEFSQSNAKSYKDQIDLVAGGVPCPPFSKAG 98
>gi|302900266|ref|XP_003048231.1| hypothetical protein NECHADRAFT_39810 [Nectria haematococca mpVI
77-13-4]
gi|256729163|gb|EEU42518.1| hypothetical protein NECHADRAFT_39810 [Nectria haematococca mpVI
77-13-4]
Length = 1354
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 18/95 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF------------PN 49
L+ DLFCG G LE +E ++++ N ++ TY AN +
Sbjct: 823 LRGLDLFCGGGNFGRGLEDGG---GIEMRWANDFNEKAMHTYMANTAGPGAVSPFLGSID 879
Query: 50 TLIFGDIAKIKTQDIP---DHDVLLAGFPCQPFSQ 81
L I ++P D D + G PC FS
Sbjct: 880 ELQRLAIQGEFANNVPLVGDVDFISGGSPCPGFSL 914
>gi|73948984|ref|XP_856563.1| PREDICTED: similar to DNA methyltransferase 2 isoform c isoform 3
[Canis familiaris]
Length = 345
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
L++ +L+ GIGG+ L ++ + + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGIGGMHQALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 61 --TQDIPDHDVLLAGFPCQPFSQ 81
D +++L PCQPF++
Sbjct: 62 LEEFDKLSFNMILMSPPCQPFTR 84
>gi|57040472|ref|XP_544244.1| PREDICTED: similar to DNA methyltransferase 2 isoform b isoform 1
[Canis familiaris]
Length = 367
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
L++ +L+ GIGG+ L ++ + + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRVLELYSGIGGMHQALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 61 --TQDIPDHDVLLAGFPCQPFSQ 81
D +++L PCQPF++
Sbjct: 62 LEEFDKLSFNMILMSPPCQPFTR 84
>gi|94994344|ref|YP_602442.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10750]
gi|94547852|gb|ABF37898.1| DNA-cytosine methyltransferase [Streptococcus pyogenes MGAS10750]
Length = 119
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY--QANFPNTLIFGDIAKI 59
+K DLF GIGG RL L ++ EC EI+ ++ ++Y + F DI ++
Sbjct: 4 MKFLDLFAGIGGFRLGL----INQCHECIGFCEIDKFARQSYKAIYETEGEIEFHDIRQV 59
Query: 60 KTQDI----PDHDVLLAGF 74
QD D++ GF
Sbjct: 60 TDQDFRQLRGQVDIICGGF 78
>gi|291402254|ref|XP_002717405.1| PREDICTED: tRNA aspartic acid methyltransferase 1 [Oryctolagus
cuniculus]
Length = 367
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIA 57
L++ +L+ GIGG+ L+++ + + ++N + + Y+ NFP+T I
Sbjct: 4 LRVLELYSGIGGMHHALKESCVPA--QVVAAIDVNTVANEVYEYNFPHTLLLAKTIEGIT 61
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
++ D +++L PCQPF++
Sbjct: 62 -LEEFDKLSFNMILMSPPCQPFTR 84
>gi|109638476|ref|YP_656741.1| ORF86 [Ranid herpesvirus 1]
gi|4219046|gb|AAD12284.1| ORF86 [Ranid herpesvirus 1]
Length = 739
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 16/89 (17%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI--------- 56
D+F G GG+ L L + ++ + P ++ +AN N
Sbjct: 280 DVFSGCGGLSLGLCDAGL---CDVRWAIDNWPVALDALKANHANATTIEADVGVALHALQ 336
Query: 57 ----AKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ + + ++ G PCQ +S
Sbjct: 337 ESGTMSHPWPAVGEVECMVGGPPCQGYSI 365
>gi|189423373|ref|YP_001950550.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ]
gi|189419632|gb|ACD94030.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ]
Length = 375
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60
+ + D FCG GG ++ ++ F+ +++ + T+ NFP I K+
Sbjct: 19 ISVFDFFCGCGGTSRGFQKA----GMDIAFALDVDKDAKNTFTKNFPSTDFCDKSIKKLT 74
Query: 61 TQDIPD--------HDVLLAGFPCQPFSQ 81
D + + PCQPF++
Sbjct: 75 VLDFQHTLDKYKDSYKLFCGCAPCQPFTK 103
>gi|1709163|sp|P50188|MTN1_NOCAE RecName: Full=Modification methylase NaeI; Short=M.NaeI; AltName:
Full=Cytosine-specific methyltransferase NaeI
gi|775103|gb|AAC43325.1| NaeI modification methyltransferase [Lechevalieria
aerocolonigenes]
Length = 413
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
L++ ++ G GG L LE+ + E++ + K +++ T D +
Sbjct: 4 LEVVEICAGAGGQALGLEKA----GFSHRLAVELDVNAAATLRKNLKSDVVITGDVADPS 59
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + +L G PC PFS AG
Sbjct: 60 VLNPMEHLGVSLLAGGVPCPPFSIAG 85
>gi|298504342|gb|ADI83065.1| DNA methyltransferase, putative [Geobacter sulfurreducens KN400]
Length = 305
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 7/81 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
++ +LFCGIGG +E V + + + + + D+ ++
Sbjct: 1 MRAVELFCGIGGFAAAVE----GTGVHVVAALDQDDAALATYRLNFPGHGARKVDLERVS 56
Query: 61 TQD--IPDHDVLLAGFPCQPF 79
+ D+ PCQP+
Sbjct: 57 AWELTAGGVDLWWLSPPCQPY 77
>gi|222107089|ref|YP_002547880.1| DNA-cytosine methyltransferase [Agrobacterium vitis S4]
gi|221738268|gb|ACM39164.1| DNA-cytosine methyltransferase [Agrobacterium vitis S4]
Length = 390
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 25/87 (28%), Gaps = 8/87 (9%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV------KTYQANFPNTLIFGDI 56
I L G GG+ L +E E ++ P +
Sbjct: 11 NIISLCTGGGGLDLAVELAVPSA--RTVCMVEREGFACGALVSAMEAGLMAPAPVWSDAR 68
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D L+ G PCQP S AG
Sbjct: 69 TFNGRPWRGLVDGLIGGIPCQPHSLAG 95
>gi|155370846|ref|YP_001426380.1| hypothetical protein FR483_N748L [Paramecium bursaria Chlorella
virus FR483]
gi|155124166|gb|ABT16033.1| hypothetical protein FR483_N748L [Paramecium bursaria Chlorella
virus FR483]
Length = 349
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 8/83 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ +LF G+GGI L E + + N + GDI K
Sbjct: 1 MNALELFAGVGGITHGLRGYVTPHAF-----VEYETEA--SEFLKHKNKPVHGDITKFDA 53
Query: 62 QDIP-DHDVLLAGFPCQPFSQAG 83
+ D++ AG+PC FS AG
Sbjct: 54 SEYKGIVDIVTAGWPCTGFSTAG 76
>gi|148977150|ref|ZP_01813790.1| adenine/cytosine DNA methyltransferase [Vibrionales bacterium
SWAT-3]
gi|145963619|gb|EDK28881.1| adenine/cytosine DNA methyltransferase [Vibrionales bacterium
SWAT-3]
Length = 820
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 26/102 (25%)
Query: 1 MLKITDLFC--GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA- 57
M+ LF GIG L +C ++E+ + + N G I
Sbjct: 1 MITYISLFSSAGIGCFGL------KELGFKCIATAELLEKRLNIQKYNNKCEYESGYICG 54
Query: 58 -----------------KIKTQDIPDHDVLLAGFPCQPFSQA 82
+ +++ D D+++A PCQ S A
Sbjct: 55 DLTQKETHDTLYGEIDAYKQRKNLKDIDLVVATPPCQGMSVA 96
>gi|303291186|ref|XP_003064879.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453550|gb|EEH50859.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 280
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 27/83 (32%), Gaps = 9/83 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+L++ +L G +E+ +EC + +I+ A+
Sbjct: 41 ILRVLELCAGSSSFSKAVERICKKLGIECKVYRLDIDSRCTVEIVADIEKWTCQS----- 95
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
D++ PC +S A
Sbjct: 96 ---KKGFFDIIWCSPPCTNYSNA 115
>gi|315053597|ref|XP_003176173.1| modification methylase HphIA [Arthroderma gypseum CBS 118893]
gi|311338019|gb|EFQ97221.1| modification methylase HphIA [Arthroderma gypseum CBS 118893]
Length = 581
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
D FCG GG+ +Q + ++ + +P ++ +Y+ANFP++L
Sbjct: 276 YTFGDGFCGAGGVSRGAQQAGLRLS----WAFDHSPSAMNSYRANFPSSLAETSDVADFL 331
Query: 62 QDIP---DHDVLLAGFPCQPFSQA 82
+ DVL PCQPFS A
Sbjct: 332 TNRSLDIRIDVLHLSPPCQPFSPA 355
>gi|222618843|gb|EEE54975.1| hypothetical protein OsJ_02581 [Oryza sativa Japonica Group]
Length = 353
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ + + GIGG+R L + E + +IN + Y+ NF + G+I +
Sbjct: 8 KVLEFYSGIGGMRYSL--AASGARAEVVEAFDINDVANDVYELNFGHRPYQGNIQTLTAS 65
Query: 63 --DIPDHDVLLAGFPCQPFSQAG 83
D L PCQP+++ G
Sbjct: 66 DLDKYKAQAWLLSPPCQPYTRQG 88
>gi|218188646|gb|EEC71073.1| hypothetical protein OsI_02832 [Oryza sativa Indica Group]
Length = 353
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ + + GIGG+R L + E + +IN + Y+ NF + G+I +
Sbjct: 8 KVLEFYSGIGGMRYSL--AASGARAEVVEAFDINDVANDVYELNFGHRPYQGNIQTLTAS 65
Query: 63 --DIPDHDVLLAGFPCQPFSQAG 83
D L PCQP+++ G
Sbjct: 66 DLDKYKAQAWLLSPPCQPYTRQG 88
>gi|256811042|ref|YP_003128411.1| DNA-cytosine methyltransferase [Methanocaldococcus fervens AG86]
gi|256794242|gb|ACV24911.1| DNA-cytosine methyltransferase [Methanocaldococcus fervens AG86]
Length = 362
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY 43
MLK DLFCG GG E + E+N + +Y
Sbjct: 1 MLKFIDLFCGCGGFSRGF----VEEGFEPLVAVELNEDAAFSY 39
>gi|260459541|ref|ZP_05807795.1| DNA methyltransferase [Mesorhizobium opportunistum WSM2075]
gi|259034343|gb|EEW35600.1| DNA methyltransferase [Mesorhizobium opportunistum WSM2075]
Length = 135
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 31/93 (33%), Gaps = 14/93 (15%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI- 59
ML + GI + F SEI + ++ + L ++K
Sbjct: 1 MLTYGSVCSGI----EAASVAWEPLGWRPKFFSEIEAFPSAVLAHHYGSNLPGEPLSKNG 56
Query: 60 ---------KTQDIPDHDVLLAGFPCQPFSQAG 83
D D+L+ G PCQ FS AG
Sbjct: 57 VPNYGDFTSIPGDAGPVDLLVGGTPCQSFSVAG 89
>gi|240142254|ref|YP_002966764.1| putative site-specific DNA-methyltransferase [Methylobacterium
extorquens AM1]
gi|240012198|gb|ACS43423.1| putative site-specific DNA-methyltransferase [Methylobacterium
extorquens AM1]
Length = 384
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ LF G G + LE EC E++ + + + FP + D++ +
Sbjct: 1 MRTIGLFSGSGSLEAGLE----AGGHECLMLCEVSEPARRVLASRFPGVPVAHDVSDLAR 56
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
P D+L AGFPCQ S +G
Sbjct: 57 L--PSCDLLAAGFPCQDLSLSG 76
>gi|60098349|emb|CAH65005.1| hypothetical protein RCJMB04_1a16 [Gallus gallus]
Length = 102
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKI- 59
L++ +L+ GIGG+ L+++ E + ++N + + Y+ NFP+T I I
Sbjct: 4 LRVLELYSGIGGMHQALKESCICA--EVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGIT 61
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQ 81
K D D++L PCQPF++
Sbjct: 62 LKEFDRLSFDMILMSPPCQPFTR 84
>gi|328947445|ref|YP_004364782.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM
2489]
gi|328447769|gb|AEB13485.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM
2489]
Length = 445
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----KI 59
+ + GI + N + + SEI + + +PN GD+ KI
Sbjct: 6 VGSICSGI----EAASVAWKDFNFDFKWFSEIAEFQSNFLRIKYPNIKNLGDMNLIGKKI 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
T +I D++ G PCQ FS AG
Sbjct: 62 ATAEIDSPDLICGGTPCQAFSLAG 85
>gi|257387778|ref|YP_003177551.1| DNA methyltransferase [Halomicrobium mukohataei DSM 12286]
gi|257170085|gb|ACV47844.1| DNA methyltransferase [Halomicrobium mukohataei DSM 12286]
Length = 239
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 13/78 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
DL G+GG E N R + EI I D+ ++ D+
Sbjct: 14 LDLCAGLGGFSSAFEDAENWR----VVTVEIEE---------EFEPDICADVLNLRPADL 60
Query: 65 PDHDVLLAGFPCQPFSQA 82
P D++LA PC FS+A
Sbjct: 61 PAADIVLASPPCTTFSKA 78
>gi|323691274|ref|ZP_08105549.1| cytosine-specific methyltransferase [Clostridium symbiosum
WAL-14673]
gi|323504614|gb|EGB20401.1| cytosine-specific methyltransferase [Clostridium symbiosum
WAL-14673]
Length = 324
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++I +LF GIG R L + EIN +V++Y + F L + +
Sbjct: 5 IQILELFGGIGSPRCALRNLNIPT--KAIDYVEINEKAVRSYNSMFREELEYKTQTVVGW 62
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
P D+L+ G PCQ S AG
Sbjct: 63 NLKP--DILIHGSPCQDMSIAG 82
>gi|253991772|ref|YP_003043128.1| cytosine-specific DNA methyltransferase [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|211638547|emb|CAR67168.1| cytosine-specific dna methyltransferase (ec 2.1.1.37)
[Photorhabdus asymbiotica subsp. asymbiotica ATCC
43949]
gi|253783222|emb|CAQ86387.1| cytosine-specific DNA methyltransferase [Photorhabdus
asymbiotica]
Length = 167
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ + GI + + + + SE + Q ++P GD+A+I
Sbjct: 3 MRFGSVCSGI----EAVSVAWEPLGMSPAWFSETEKFPSAVLQYHWPYVRNLGDMAEIPA 58
Query: 62 QDIPDH----DVLLAGFPCQPFSQAG 83
+ D+L+ G PCQ FS AG
Sbjct: 59 MITENLADALDILVGGTPCQAFSIAG 84
>gi|167759130|ref|ZP_02431257.1| hypothetical protein CLOSCI_01477 [Clostridium scindens ATCC
35704]
gi|167663248|gb|EDS07378.1| hypothetical protein CLOSCI_01477 [Clostridium scindens ATCC
35704]
Length = 324
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++I +LF GIG R L + EIN +V++Y + F L + +
Sbjct: 5 IQILELFGGIGSPRCALRNLNIQT--KAIDYVEINEKAVRSYNSMFREELEYKTQTVVGW 62
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
P D+L+ G PCQ S AG
Sbjct: 63 NLKP--DILIHGSPCQDMSIAG 82
>gi|256828696|ref|YP_003157424.1| C-5 cytosine-specific DNA methylase [Desulfomicrobium baculatum DSM
4028]
gi|256577872|gb|ACU89008.1| C-5 cytosine-specific DNA methylase [Desulfomicrobium baculatum DSM
4028]
Length = 397
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 28/100 (28%), Gaps = 22/100 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN---PYSVKTYQANFPNTLIFGDIAK 58
+ DLF G GG+ F H + +++ P + I
Sbjct: 4 FTVIDLFSGAGGMSYGF---FKHEAFKIIAAADAELGKPSAGNGKLQCNTTYQKNIGINP 60
Query: 59 IKT----------------QDIPDHDVLLAGFPCQPFSQA 82
+ + ++L PC FS+A
Sbjct: 61 VNCDLSKIDPKNLKKILKLNNNDKVNILSCCPPCTGFSRA 100
>gi|126540951|emb|CAM46948.1| DNA (cytosine-5-)-methyltransferase 3 [Danio rerio]
Length = 1448
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57
+++ LF GI L L VE + +SEI+ S+ N +I
Sbjct: 1164 IRVLSLFDGIATGYLVLRDLG--FKVEKYVASEIDEESITISMVNHDGKITQVDDVKNIT 1221
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K + D+L+ G PC S
Sbjct: 1222 KKHIEQWGPFDLLIGGSPCNDLSI 1245
>gi|171684935|ref|XP_001907409.1| hypothetical protein [Podospora anserina S mat+]
gi|170942428|emb|CAP68080.1| unnamed protein product [Podospora anserina S mat+]
Length = 752
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIK 60
D+F G GG +E++ FS + P + + + ++
Sbjct: 328 YTAADIFAGAGGASRGIERS----GCRLLFSLDHWEPAARSLRRNFPGTHIYQKEVTDFV 383
Query: 61 TQDIP----DHDVLLAGFPCQPFSQA 82
T+D+P D+L PCQ +S A
Sbjct: 384 TEDLPPEHSYPDILHLSPPCQFWSPA 409
>gi|2956677|emb|CAB09661.1| DNA-C5-methyltransferase [Ascobolus immersus]
Length = 1336
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 38/105 (36%), Gaps = 29/105 (27%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
LK D+F G GG+ L L+ + V+ ++ E P + T NFP+ +F A +
Sbjct: 784 LKGLDIFAGCGGLTLGLDLSGA---VDTKWAIEFAPSAANTLALNFPDAQVFNQCANVLL 840
Query: 60 ------------------------KTQDIPDHDVLLAGFPCQPFS 80
+ D + G PCQ FS
Sbjct: 841 SRAIQSEDEGSLDIEYDLQGRVLPDLPKKGEVDFIYGGPPCQGFS 885
>gi|255322450|ref|ZP_05363595.1| modification methylase HgiDII [Campylobacter showae RM3277]
gi|255300358|gb|EET79630.1| modification methylase HgiDII [Campylobacter showae RM3277]
Length = 351
Score = 52.6 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 14/90 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60
K D FCG GG+ L Q + + + + +TY+ N + I DI K+K
Sbjct: 4 YKAIDFFCGGGGMTCGLRQA----GIYVVAGIDFDKDAKETYEYNNKGSVFIHSDIRKLK 59
Query: 61 TQDIPDHD---------VLLAGFPCQPFSQ 81
+ + PCQ +S
Sbjct: 60 IDYFEQNFHINRNDDNLIFAGCSPCQFYSI 89
>gi|323139132|ref|ZP_08074189.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242]
gi|322395603|gb|EFX98147.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242]
Length = 421
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 8/83 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN--PYSVKTYQANFPNTLIFGDIAK 58
M + F G G R L C F+++ + L+ GD+ K
Sbjct: 41 MPDFYEFFAGGGMARKGL-----GAGWTCLFANDFDHKKGLSYQANWGTGGELLVGDVRK 95
Query: 59 IKTQDIP-DHDVLLAGFPCQPFS 80
+ +P D++ FPCQ S
Sbjct: 96 VTPSQLPGCADLVWGSFPCQDLS 118
>gi|190337984|gb|AAI62467.1| DNA (cytosine-5-)-methyltransferase 3 [Danio rerio]
Length = 1448
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57
+++ LF GI L L VE + +SEI+ S+ N +I
Sbjct: 1164 IRVLSLFDGIATGYLVLRDLG--FKVEKYVASEIDEESITISMVNHDGKITQVDDVKNIT 1221
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K + D+L+ G PC S
Sbjct: 1222 KKHIEQWGPFDLLIGGSPCNDLSI 1245
>gi|153870382|ref|ZP_01999795.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
gi|152073154|gb|EDN70207.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
Length = 349
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT-- 61
+ FCGIGG + + +I+ ++ N + + DIAK+
Sbjct: 1 MLIFFCGIGGFSYGI----YKSGLRIDAGVDIDNSCQYAFETNCKSKFLCEDIAKLTGTR 56
Query: 62 ----QDIPDHDVLLAGFPCQPFS 80
D VL+ PCQPFS
Sbjct: 57 VNALYTKNDIKVLVGCAPCQPFS 79
>gi|62719324|ref|NP_571461.1| DNA (cytosine-5-)-methyltransferase 3 [Danio rerio]
gi|62433259|dbj|BAD95477.1| DNA methyltransferase [Danio rerio]
Length = 1448
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57
+++ LF GI L L VE + +SEI+ S+ N +I
Sbjct: 1164 IRVLSLFDGIATGYLVLRDLG--FKVEKYVASEIDEESITISMVNHDGKITQVDDVKNIT 1221
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K + D+L+ G PC S
Sbjct: 1222 KKHIEQWGPFDLLIGGSPCNDLSI 1245
>gi|15669386|ref|NP_248195.1| type II R/M system modification methyltransferase
[Methanocaldococcus jannaschii DSM 2661]
gi|2500154|sp|Q58600|MT52_METJA RecName: Full=Probable modification methylase MJ1200; AltName:
Full=Cytosine-specific methyltransferase MJ1200;
AltName: Full=M.MjaVIIP
gi|1591829|gb|AAB99203.1| modification methylase, type II R/M system [Methanocaldococcus
jannaschii DSM 2661]
Length = 366
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 37/140 (26%), Gaps = 62/140 (44%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-------- 52
MLK DLFCG GG E + E+N + +Y NF +
Sbjct: 4 MLKFIDLFCGCGGFSRGF----VEEGFEPLVAIELNEDAAFSYALNFNGQIYEKIRPGEF 59
Query: 53 --------------------------------------------FGDIAKIKTQD----- 63
DI +I +
Sbjct: 60 KLKELKGYVGIYPFKFPFEEEDIKWLKRLGTLNEKTKKLSPVVINDDIREIHAIEIEKFI 119
Query: 64 -IPDHDVLLAGFPCQPFSQA 82
DV++ G PC+ ++ A
Sbjct: 120 KNKKVDVIIGGPPCEGYTGA 139
>gi|302184862|ref|ZP_07261535.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. syringae
642]
Length = 529
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 36/132 (27%), Gaps = 50/132 (37%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--------------------- 40
+I DLF G GG+ + + + S+E++P +
Sbjct: 7 FQIVDLFSGPGGLSEGFASFKDGKQFKIIVSAEMDPIAHKTLMLRAYFRLLNSEAPDHKK 66
Query: 41 -KTYQANFPNTLIFGDIAKIKTQDIP----------------------------DHDVLL 71
N + + ++ + VL+
Sbjct: 67 DYYDYCNGISKKPYSNVTEHLWNKAKKEANCLTLGDEKDNFKLDTMIKDRLLSNQPWVLI 126
Query: 72 AGFPCQPFSQAG 83
G PCQ +S AG
Sbjct: 127 GGPPCQAYSLAG 138
>gi|28198487|ref|NP_778801.1| site-specific DNA-methyltransferase [Xylella fastidiosa
Temecula1]
gi|182681164|ref|YP_001829324.1| DNA-cytosine methyltransferase [Xylella fastidiosa M23]
gi|28056571|gb|AAO28450.1| site-specific DNA-methyltransferase [Xylella fastidiosa
Temecula1]
gi|182631274|gb|ACB92050.1| DNA-cytosine methyltransferase [Xylella fastidiosa M23]
gi|307579611|gb|ADN63580.1| DNA-cytosine methyltransferase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 355
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT--- 61
DLFCG+GG+ L + +I+P ++AN + D+A++K
Sbjct: 17 VDLFCGVGGLTHGL----ARGGISVAAGIDIDPNCQFPFEANNAALFLECDVARLKAAAV 72
Query: 62 ---QDIPDHDVLLAGFPCQPFS 80
D +L PCQPFS
Sbjct: 73 RGFYQAADITLLAGCAPCQPFS 94
>gi|226945654|ref|YP_002800727.1| C-5 cytosine-specific DNA methylase [Azotobacter vinelandii DJ]
gi|226720581|gb|ACO79752.1| C-5 cytosine-specific DNA methylase [Azotobacter vinelandii DJ]
Length = 501
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 35/100 (35%), Gaps = 23/100 (23%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ +L G GG+ L L+ E E N + TY NF ++
Sbjct: 30 KVLELCSGCGGLSLGLKTA----GFELAAHVESNDEANATYALNFAPENPAQTKQWAISR 85
Query: 63 DI-------------------PDHDVLLAGFPCQPFSQAG 83
D+ DVL AG PCQ F++ G
Sbjct: 86 DMVAQSMSDLITDFGLAGGPREAFDVLAAGLPCQAFARIG 125
>gi|78221478|ref|YP_383225.1| C-5 cytosine-specific DNA methylase [Geobacter metallireducens
GS-15]
gi|78192733|gb|ABB30500.1| C-5 cytosine-specific DNA methylase [Geobacter metallireducens
GS-15]
Length = 331
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
L+ +LFCGIGG +E NV + + +P ++ TY+ + D+ ++
Sbjct: 27 LRTLELFCGIGGFSAAVE----GGNVRIVGAFDQDPAALDTYRLNFPGHGARKVDLERVS 82
Query: 61 TQD--IPDHDVLLAGFPCQPF 79
+ D+ PCQP+
Sbjct: 83 AWELTAGGVDLWWLSPPCQPY 103
>gi|190571759|ref|YP_001966438.1| M2.LlaJI [Lactococcus lactis]
gi|46487640|gb|AAS99178.1| M2.LlaJI [Lactococcus lactis]
Length = 379
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIK 60
L+ LF +G I + V+ ++EI+ + +I GDI +
Sbjct: 4 LRGLSLFANVG-IAEAF---LDEIGVDIKIANEIDKERARFYQDVYPNTNMICGDITEDT 59
Query: 61 TQD-------IPDHDVLLAGFPCQPFSQAG 83
T+D D D ++A PCQ S+AG
Sbjct: 60 TRDLIVDLAIKEDVDFVIATPPCQGMSEAG 89
>gi|114330146|ref|YP_746368.1| DNA-cytosine methyltransferase [Nitrosomonas eutropha C91]
gi|114307160|gb|ABI58403.1| DNA-cytosine methyltransferase [Nitrosomonas eutropha C91]
Length = 497
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ + GI + + + + + SEI P+ +P+ GD+ +I
Sbjct: 10 LQYGSVCSGI----EAVSLAWQPQGPQAAWFSEIEPFPCAVLAHRYPDVPNLGDMTQIAE 65
Query: 62 QDIP----DHDVLLAGFPCQPFSQAG 83
Q D+L+ G PCQ FS AG
Sbjct: 66 QVRAGLVVAPDILVGGTPCQTFSIAG 91
>gi|182436696|ref|YP_001824415.1| hypothetical protein SGR_2903 [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178465212|dbj|BAG19732.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 359
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---K 58
L+ L G GG+ L +E +PY+ + A+ P GDI
Sbjct: 15 LRAVALCAGYGGLETAL---GAGIGAVPVAYAENDPYAAAVFAAHHPGVPNLGDITRADW 71
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +D+ +++ AGFPC+ S AG
Sbjct: 72 ERVRDLYRPEIVGAGFPCRNISNAG 96
>gi|167462173|ref|ZP_02327262.1| hypothetical protein Plarl_06385 [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 232
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 9/80 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ DLFC GG E +I P Y+ + + ++ Q
Sbjct: 4 KLLDLFCKAGGCSAGYASA----GFEVIG-VDIEPQPNYPYEFIWADAFEVLKDHELIDQ 58
Query: 63 DIPDHDVLLAGFPCQPFSQA 82
DV+ A PCQ S+A
Sbjct: 59 ----FDVIHASPPCQAHSKA 74
>gi|330940085|gb|EGH43270.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 502
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
L+ + GI ++ +E + +EI P+ ++P T GD+ K
Sbjct: 5 LQYGSVCSGI----EAATAAWHPLGMEPVWFAEIEPFPSAVLAHHYPRTPNLGDMTKLGA 60
Query: 59 -IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I DVL+ G PCQ F AG
Sbjct: 61 LVLAGKIKAPDVLVGGTPCQAFRVAG 86
>gi|167009508|ref|ZP_02274439.1| modification methylase HaeIII [Francisella tularensis subsp.
holarctica FSC200]
Length = 65
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49
+K+ F G GG+ L E+ + +++E + +TY+ N PN
Sbjct: 1 MKVVSFFSGAGGLDLGFERA----GFDIIWANEFDKEIWETYEKNHPN 44
>gi|297570127|ref|YP_003691471.1| DNA-cytosine methyltransferase [Desulfurivibrio alkaliphilus
AHT2]
gi|296926042|gb|ADH86852.1| DNA-cytosine methyltransferase [Desulfurivibrio alkaliphilus
AHT2]
Length = 363
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 10/84 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLFCG+G + L ++ +++ ++ N + D+ K+ +
Sbjct: 19 VVDLFCGVGALSHGLRNA----GLKILAGYDVDARCKYAFETNNSASFFSRDVGKLTAAE 74
Query: 64 IPDHD------VLLAGFPCQPFSQ 81
+ H VL PCQPFS
Sbjct: 75 LKSHFSGNVPSVLAGCAPCQPFST 98
>gi|320540918|ref|ZP_08040419.1| putative site-specific DNA methylase [Serratia symbiotica str.
Tucson]
gi|320029019|gb|EFW11197.1| putative site-specific DNA methylase [Serratia symbiotica str.
Tucson]
Length = 223
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY--SVKTYQANFPNTLIFGDIAKIKT 61
+ F G G + + +C F+++ +P + L+ DI I +
Sbjct: 43 FYEFFAGGG-----MARAGLGAQWDCLFANDFSPMKGHAYRSNWSGGTDLLVEDINNITS 97
Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83
+P D++ A FPCQ S AG
Sbjct: 98 AQLPAQADLVWASFPCQDLSLAG 120
>gi|68536951|ref|YP_251655.1| putative DNA restriction-modification system, DNA methylase
[Corynebacterium jeikeium K411]
gi|68264550|emb|CAI38038.1| putative DNA restriction-modification system, DNA methylase
[Corynebacterium jeikeium K411]
Length = 341
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--IAKI 59
L ++ G GG L LE E++ ++V T +AN P I +
Sbjct: 5 LTSVEICAGAGGQALGLEAA----GFIHRAVVELDGHAVSTLRANRPAWNIVHGDVLDFD 60
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D D+L G PC PFS AG
Sbjct: 61 ISPFADDLDLLAGGVPCPPFSIAG 84
>gi|288799842|ref|ZP_06405301.1| modification methylase BepI (Cytosine-specific methyltransferase
BepI) [Prevotella sp. oral taxon 299 str. F0039]
gi|288333090|gb|EFC71569.1| modification methylase BepI (Cytosine-specific methyltransferase
BepI) [Prevotella sp. oral taxon 299 str. F0039]
Length = 406
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 18/78 (23%)
Query: 23 NHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-----------------IP 65
+ E F+++INPY+ K ++ N DI++I D
Sbjct: 36 KETDFETIFANDINPYA-KRTWVDYFNRKRKQDISEIYILDSIVDIVKKYRNGEISILPI 94
Query: 66 DHDVLLAGFPCQPFSQAG 83
+ D++ GFPCQ FS AG
Sbjct: 95 NVDIVTGGFPCQDFSVAG 112
>gi|298714740|emb|CBJ25639.1| Cytosine-C5 specific DNA methyltransferase [Ectocarpus siliculosus]
Length = 412
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFP-NTLIFGDIAKIKTQ 62
+ + GIGG+R+ LE+ ++E S EI+ + Y+ NFP ++ I + Q
Sbjct: 56 LEFYSGIGGLRVSLEKALEAVSLETSVGSFEISSVANSVYEHNFPGCSVTRRSIEHLSAQ 115
Query: 63 DIP-DHDVLLAGFPCQPFSQAG 83
DI D D+ L PCQPF + G
Sbjct: 116 DIEVDADIWLLSPPCQPFCRVG 137
>gi|86749313|ref|YP_485809.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2]
gi|86572341|gb|ABD06898.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2]
Length = 358
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT--- 61
DLFCG G+ L L+ + ++ +++P ++ N + D++ +
Sbjct: 17 VDLFCGAAGLSLGLKIS----GIKVAAGIDLDPACRFPFETNIGAMFVEADVSSLSGKAV 72
Query: 62 ---QDIPDHDVLLAGFPCQPFS 80
VL PCQPFS
Sbjct: 73 DSLFGDASIRVLAGCAPCQPFS 94
>gi|301766512|ref|XP_002918675.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Ailuropoda
melanoleuca]
Length = 391
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIK 60
L+ +L+ GIGG+ L ++ + ++N + + Y+ NFP+T + I I
Sbjct: 4 LRALELYSGIGGMHQALRESCVPA--HVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 61 --TQDIPDHDVLLAGFPCQPFSQAG 83
D + +L PCQPF++ G
Sbjct: 62 LEEFDKLSFNTILMSPPCQPFTRIG 86
>gi|167462144|ref|ZP_02327233.1| hypothetical protein Plarl_06240 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322382466|ref|ZP_08056361.1| hypothetical protein PL1_2405 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321153579|gb|EFX45968.1| hypothetical protein PL1_2405 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 232
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 9/80 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ DLFC GG E +I P Y+ + + ++
Sbjct: 4 KLLDLFCKAGGCSAGYASA----GFEVIG-VDIEPQPNYPYEFIWADAFEILKDHELID- 57
Query: 63 DIPDHDVLLAGFPCQPFSQA 82
+ DV+ A PCQ S+A
Sbjct: 58 ---EFDVIHASPPCQAHSKA 74
>gi|161870058|ref|YP_001599227.1| modification methylase (cytosine-specific DNA methylase)
[Neisseria meningitidis 053442]
gi|161595611|gb|ABX73271.1| modification methylase (cytosine-specific DNA methylase)
[Neisseria meningitidis 053442]
Length = 340
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 11/87 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIA 57
++ DLFCG GG+ L + ++ +I+ Y+ N +
Sbjct: 3 IEAVDLFCGAGGLTAGLLRA----GIKVKAGYDIDAACAYAYEYNNKGAKFILQDVETVT 58
Query: 58 KIKTQDIPDHD---VLLAGFPCQPFSQ 81
+ Q D +L PCQPFS
Sbjct: 59 GDQIQAHYSKDAVRLLAGCAPCQPFST 85
>gi|190571760|ref|YP_001966439.1| M1.LlaJI [Lactococcus lactis]
gi|46487639|gb|AAS99177.1| M1.LlaJI [Lactococcus lactis]
Length = 465
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIK 60
+ LF IG E ++ ++E+ ++ + + +I GDI
Sbjct: 91 INALSLFANIG----VAEAYLEDIGIDVVVANELEERRAILYQKIYPKSHMICGDITDKS 146
Query: 61 TQDIPDH-------DVLLAGFPCQPFSQAG 83
+D D+++A PCQ S AG
Sbjct: 147 IEDKIIKESKEKKVDLVMATPPCQGMSTAG 176
>gi|326794216|ref|YP_004312036.1| DNA-cytosine methyltransferase [Marinomonas mediterranea MMB-1]
gi|326544980|gb|ADZ90200.1| DNA-cytosine methyltransferase [Marinomonas mediterranea MMB-1]
Length = 383
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 29/101 (28%), Gaps = 25/101 (24%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF---------- 53
I F G+G + L E++ + F +E Y+ +
Sbjct: 18 IFSFFAGVGFLDLGFERS----GFDIRFVNEFYKPFYDAYKYSRQKMNQPEPLYEHHLGS 73
Query: 54 --------GDIAKIKTQDIPDHDVL---LAGFPCQPFSQAG 83
I + D L + G PC FS AG
Sbjct: 74 IDEFLAGPQKIRLKQYLIDAKKDGLVGFIGGPPCPDFSVAG 114
>gi|67514587|ref|NP_001019999.1| DNA (cytosine-5)-methyltransferase 3B [Gallus gallus]
gi|66766326|dbj|BAD99024.1| DNA methyltransferase 3B [Gallus gallus]
Length = 851
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
+++ LF GI L L+ VE + +SEI ++ N +I
Sbjct: 569 IRVLSLFDGIATGYLVLKDLGIQ--VEKYIASEICEDPLAVGTVRHEGNITYVHDVRNIT 626
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82
K ++ D+++ G PC S A
Sbjct: 627 KRNIEEWGPFDLVIGGSPCNDLSLA 651
>gi|312199630|ref|YP_004019691.1| C-5 cytosine-specific DNA methylase [Frankia sp. EuI1c]
gi|311230966|gb|ADP83821.1| C-5 cytosine-specific DNA methylase [Frankia sp. EuI1c]
Length = 545
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 23/80 (28%), Gaps = 3/80 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
DLFCG GG L ++ + DI+ +
Sbjct: 7 TALDLFCGAGGSSTGLVGAGVRVTH---AANHWPLAVEVHGLNHPETEHDCADISGTDPR 63
Query: 63 DIPDHDVLLAGFPCQPFSQA 82
P D+L A C S A
Sbjct: 64 RYPSTDILWASPECTNQSVA 83
>gi|257877766|ref|ZP_05657419.1| C-5 cytosine-specific DNA methylase [Enterococcus casseliflavus
EC20]
gi|257811932|gb|EEV40752.1| C-5 cytosine-specific DNA methylase [Enterococcus casseliflavus
EC20]
Length = 416
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 31/110 (28%), Gaps = 31/110 (28%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
L +LF G GG+ EQT E + E V+T N
Sbjct: 4 LTNIELFAGAGGLLDGFEQTGF---YELLGAVEWMKPQVRTLINRLENKYDDQYASEKVL 60
Query: 56 -------IAKIKTQD---------------IPDHDVLLAGFPCQPFSQAG 83
+ D DV+ G PCQ +S AG
Sbjct: 61 NFDIQRTDELLHGWDDDEFGFNTGLDSLVGNRKVDVISGGPPCQAYSLAG 110
>gi|237737311|ref|ZP_04567792.1| DNA-cytosine methyltransferase [Fusobacterium mortiferum ATCC 9817]
gi|229421173|gb|EEO36220.1| DNA-cytosine methyltransferase [Fusobacterium mortiferum ATCC 9817]
Length = 407
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 41/123 (33%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHR---------------------------NVECFFSSE 34
+ DLF G GG+ + + ++ ++S
Sbjct: 1 MNCLDLFSGAGGLTEGFVRAGYNIIAHVEKEFSASLTLKTRIAYHYLKQTNQLKIYYSYL 60
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQD--------------IPDHDVLLAGFPCQPFS 80
+ S + ++ P+ L+ I + + + D+++ G PCQ +S
Sbjct: 61 NDEISREKLYSHIPSQLLDSVINEEINDESINDIYNKIDILRGNKEIDIIIGGPPCQAYS 120
Query: 81 QAG 83
G
Sbjct: 121 LIG 123
>gi|289192310|ref|YP_003458251.1| DNA-cytosine methyltransferase [Methanocaldococcus sp. FS406-22]
gi|288938760|gb|ADC69515.1| DNA-cytosine methyltransferase [Methanocaldococcus sp. FS406-22]
Length = 363
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY 43
MLK DLFCG GG E + E+N + +Y
Sbjct: 1 MLKFIDLFCGCGGFSRGF----VEEGFEPLVAIELNEDAAFSY 39
>gi|29832079|ref|NP_826713.1| type II restriction-modification system DNA cytosine-specific
methylase [Streptomyces avermitilis MA-4680]
gi|29609197|dbj|BAC73248.1| putative type II restriction-modification system DNA
cytosine-specific methylase [Streptomyces avermitilis
MA-4680]
Length = 515
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60
L +TDLFCG GG V+ F++ ++ ++QAN P+ DI++++
Sbjct: 49 LSLTDLFCGAGGSSTG---AAMVPGVQVAFAANHARDAIDSHQANHPDADHDLADISEVE 105
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
P D+L A C S A
Sbjct: 106 PTRYPRTDLLWASPACTAHSLA 127
>gi|159461702|gb|ABW96890.1| DRM-type DNA-methyltransferase [Elaeis guineensis]
Length = 591
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 15/92 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+ + LF GIGG + L + H + S EI+ + ++ + T G++ +
Sbjct: 466 ITVLSLFSGIGGAEVALHRLGIHL--KTVVSVEISDVNRNILKSWWEQTNQTGELIDLFD 523
Query: 60 -----------KTQDIPDHDVLLAGFPCQPFS 80
D+++ G PC S
Sbjct: 524 VQELNGDKLEQMINTFGGFDLVIGGSPCNNLS 555
>gi|242316067|ref|ZP_04815083.1| modification methylase HgiDII [Burkholderia pseudomallei 1106b]
gi|242139306|gb|EES25708.1| modification methylase HgiDII [Burkholderia pseudomallei 1106b]
Length = 349
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLFCG GG+ ++ +++P Y+AN + D++ + T
Sbjct: 9 ISCVDLFCGAGGLTHGF----VLEDLPVVAGIDLDPACRYPYEANNRAKFVERDVSTVTT 64
Query: 62 QDIP------DHDVLLAGFPCQPFS 80
+++ + +L PCQPFS
Sbjct: 65 EELETLFGDAELTILAGCAPCQPFS 89
>gi|145629891|ref|ZP_01785682.1| modification methylase Bsp6I-like protein [Haemophilus influenzae
22.1-21]
gi|144977718|gb|EDJ87668.1| modification methylase Bsp6I-like protein [Haemophilus influenzae
22.1-21]
Length = 411
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 21 TFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----KIKTQDIPDHDVLLAGFPC 76
+ + + SEI P+ ++PN GD+ KI ++IP DVL+ G PC
Sbjct: 4 AWKGLG-KPLWFSEIEPFPCAVLTYHYPNIPNLGDMTTLPEKILNREIPAPDVLVGGTPC 62
Query: 77 QPFSQAG 83
Q FS AG
Sbjct: 63 QAFSIAG 69
>gi|253997214|ref|YP_003049278.1| DNA-cytosine methyltransferase [Methylotenera mobilis JLW8]
gi|253983893|gb|ACT48751.1| DNA-cytosine methyltransferase [Methylotenera mobilis JLW8]
Length = 358
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 13/95 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHR------NVECFFSSEIN----PYSVKTYQANFPNTL 51
LKI +LFCG GGI E ++ ++ + + +K + +T
Sbjct: 4 LKIGELFCGPGGIAYGAELANLELIGQTATTLKHAWAVDYHQSTVKTYLKNIKGANEHTT 63
Query: 52 IFGDIAKIKTQD---IPDHDVLLAGFPCQPFSQAG 83
+ D+ + + I + D GFPC FS+ G
Sbjct: 64 LCSDVRDLNIPELSKISEIDGFAYGFPCNDFSRVG 98
>gi|115638547|ref|XP_787412.2| PREDICTED: similar to DNA methyltransferase 3A [Strongylocentrotus
purpuratus]
gi|115931470|ref|XP_001187128.1| PREDICTED: similar to DNA methyltransferase 3A [Strongylocentrotus
purpuratus]
Length = 1447
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
+++ LF G+G L L + VEC+++SE++ + + I
Sbjct: 1163 IRVLSLFDGLGTGMLVLRELGFD--VECYYASEVSEEAITVAAVRLKGQIQQIGDVQKIT 1220
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ + D+L+ G PC S
Sbjct: 1221 PKELKSWGPFDILIGGSPCNDLSI 1244
>gi|212632918|ref|YP_002309443.1| site-specific DNA-methyltransferase [Shewanella piezotolerans WP3]
gi|212554402|gb|ACJ26856.1| Site-specific DNA-methyltransferase (cytosine-specific) [Shewanella
piezotolerans WP3]
Length = 412
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 23 NHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIKTQDIPDH-DVLLAGFPCQPFS 80
+E F +E++ ++ KT ++ GDI+KI I DVL GFPCQ FS
Sbjct: 94 EQAGLESIFLNEMDKHACKTLRHNRPDWNVVEGDISKIDFSVIKQDVDVLTGGFPCQAFS 153
Query: 81 QAG 83
AG
Sbjct: 154 YAG 156
>gi|301385608|ref|ZP_07234026.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
Max13]
gi|302061458|ref|ZP_07252999.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
K40]
gi|330878700|gb|EGH12849.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 351
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 28/83 (33%), Gaps = 10/83 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIAKI 59
DLFCG GG+ L + +I+ Y+ N I I +
Sbjct: 7 VDLFCGAGGLTAGL----LKTGISVRAGYDIDHNCEYAYRENNGAEFITESVELTKIEDL 62
Query: 60 KTQDIPDH-DVLLAGFPCQPFSQ 81
P +L PCQPFS
Sbjct: 63 SAWYRPQRIKLLAGCAPCQPFST 85
>gi|297804976|ref|XP_002870372.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp.
lyrata]
gi|297316208|gb|EFH46631.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp.
lyrata]
Length = 1496
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 34/110 (30%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63
D+F G GG+ LE+ + ++ E + + ++ N P T +F D + +
Sbjct: 1048 LDIFAGCGGLSYGLEKAGVS---DTKWAIEYEEPAAQAFKQNHPKTTVFVDNCNVILRAI 1104
Query: 64 ---------------------------------IPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 1105 MEKCGDVDDCISTTEAAELAAKLDESQKSILPLPGQVDFINGGPPCQGFS 1154
>gi|256392223|ref|YP_003113787.1| C-5 cytosine-specific DNA methylase [Catenulispora acidiphila DSM
44928]
gi|256358449|gb|ACU71946.1| C-5 cytosine-specific DNA methylase [Catenulispora acidiphila DSM
44928]
Length = 483
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIK 60
+ TD+FCG GG L E ++ + ++ T+ AN N + D+
Sbjct: 3 ITFTDIFCGAGGSSTGLVAA----GFELKLAANHSKVAISTHAANHGNAEHVCADVNNYD 58
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
+ +P DVL A C S AG
Sbjct: 59 MRRLPTTDVLWASPICTEISPAG 81
>gi|168032180|ref|XP_001768597.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680096|gb|EDQ66535.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 383
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 20/95 (21%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPN-------TLI 52
+K+ LF GIGG E + ++ S EI+ + + +A +
Sbjct: 254 IKVLSLFSGIGG----AEVALHKMGMKLLVVVSVEIDDGTRRCLEAWWATSKQTGVLNQN 309
Query: 53 FGDIAKIKT-------QDIPDHDVLLAGFPCQPFS 80
+ +I + D+++ G PC S
Sbjct: 310 YHNIKDLGRAQISELVNKYGGFDLIVGGTPCNNLS 344
>gi|159028410|emb|CAO89852.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 446
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 14/93 (15%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M K LF GGI + E ++E+ + ++ N P +L+ K
Sbjct: 1 MRKAISLFA-CGGIG---DMALRSGGFEVVVANELLKDRAEVFKFNHPESLMIIGDIWDK 56
Query: 61 TQDI----------PDHDVLLAGFPCQPFSQAG 83
+I + D++ A PCQ S+ G
Sbjct: 57 KNEIVAETKQRLSGQNLDIVFATPPCQGMSRNG 89
>gi|126453573|ref|YP_001067912.1| modification methylase HgiDII [Burkholderia pseudomallei 1106a]
gi|126227215|gb|ABN90755.1| modification methylase HgiDII [Burkholderia pseudomallei 1106a]
Length = 344
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLFCG GG+ ++ +++P Y+AN + D++ + T
Sbjct: 4 ISCVDLFCGAGGLTHGF----VLEDLPVVAGIDLDPACRYPYEANNRAKFVERDVSTVTT 59
Query: 62 QDIP------DHDVLLAGFPCQPFS 80
+++ + +L PCQPFS
Sbjct: 60 EELETLFGDAELTILAGCAPCQPFS 84
>gi|238761849|ref|ZP_04622823.1| Cytosine-specific methyltransferase [Yersinia kristensenii ATCC
33638]
gi|238699963|gb|EEP92706.1| Cytosine-specific methyltransferase [Yersinia kristensenii ATCC
33638]
Length = 826
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 31/100 (31%), Gaps = 22/100 (22%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--- 57
ML LF G L+ C ++E+ + + N G I+
Sbjct: 1 MLNYISLFSSAGIGCYGLKSA----GFNCVATAELLEKRLNIQRYNNKCKYETGYISGDL 56
Query: 58 ---------------KIKTQDIPDHDVLLAGFPCQPFSQA 82
+ I D D+++A PCQ S A
Sbjct: 57 TDPVVHKKLYDEINSFKDKEKISDLDLVIATPPCQGMSVA 96
>gi|17232307|ref|NP_488855.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
gi|17133952|dbj|BAB76514.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
Length = 414
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 25 RNVECFFSSEINPYSVKTYQANFPNTLIFGDI-------AKIKTQDIPDHDVLLAGFPCQ 77
S EI+ ++ T + N P++ + + +K D+++ G PCQ
Sbjct: 26 AGFSVPLSVEIDTWACDTLRYNRPDSTVIQNDIGNFSTENDVKNICNFKPDIIIGGPPCQ 85
Query: 78 PFSQAG 83
FS AG
Sbjct: 86 GFSIAG 91
>gi|109897054|ref|YP_660309.1| DNA-cytosine methyltransferase [Pseudoalteromonas atlantica T6c]
gi|109699335|gb|ABG39255.1| DNA-cytosine methyltransferase [Pseudoalteromonas atlantica T6c]
Length = 372
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 25/108 (23%), Gaps = 29/108 (26%)
Query: 1 ML--KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS--------VKTYQANFPNT 50
M+ K+ F G G + L E + + +E + +
Sbjct: 1 MMPKKLFSFFSGSGFLDLGFE----KNGFDVVYVNEYHQPFLDAYEYSRQQMKIETPQYG 56
Query: 51 LIFGDIAKIKTQ---------------DIPDHDVLLAGFPCQPFSQAG 83
I I + G PC FS G
Sbjct: 57 YDNTSIEDIANNSSLLNKLARNVKQQKKEGHITGFIGGPPCPDFSVGG 104
>gi|121608158|ref|YP_995965.1| DNA-cytosine methyltransferase [Verminephrobacter eiseniae
EF01-2]
gi|121552798|gb|ABM56947.1| DNA-cytosine methyltransferase [Verminephrobacter eiseniae
EF01-2]
Length = 349
Score = 52.2 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 11/84 (13%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQD 63
DLFCG GG+ + +++P Y+ N + DI K+ T +
Sbjct: 8 VDLFCGAGGLTHGF----ILEGLPVVAGIDLDPACRFPYEKNNAQAKFVERDIGKVTTTE 63
Query: 64 IP------DHDVLLAGFPCQPFSQ 81
+ D +L PCQPFS
Sbjct: 64 LKALFGAADVTILAGCAPCQPFST 87
>gi|116193601|ref|XP_001222613.1| hypothetical protein CHGG_06518 [Chaetomium globosum CBS 148.51]
gi|88182431|gb|EAQ89899.1| hypothetical protein CHGG_06518 [Chaetomium globosum CBS 148.51]
Length = 748
Score = 52.2 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK--TYQANFPNTLIFGDIAKI 59
D+F G GG +E+ V+ F+ + +V+ + I
Sbjct: 337 YTAGDVFSGAGGASRGIERA----GVQLLFAVDHWAPAVESLKSNFRESRIYDMDVASFI 392
Query: 60 KTQD-IPDHDVLLAGFPCQPFSQA 82
+ D D+L PCQ +S A
Sbjct: 393 TSSDTHWRVDILHLSPPCQFWSPA 416
>gi|46138503|ref|XP_390942.1| hypothetical protein FG10766.1 [Gibberella zeae PH-1]
Length = 1343
Score = 52.2 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 18/95 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------N 49
L+ DLFCG G LE +E ++++ + ++ TY AN +
Sbjct: 809 LRGLDLFCGGGNFGRGLEDGG---GIEMRWANDYDGKALHTYMANTSGPDAVHPFLGSID 865
Query: 50 TLIFGDIAKIKTQDIPD---HDVLLAGFPCQPFSQ 81
+ I +++P D + G PC FS
Sbjct: 866 DMQRFAIQGKFAENVPPVGDVDFISGGSPCPGFSL 900
>gi|261414304|gb|ACX83570.1| DNA methyltransferase [Hieracium pilosella]
Length = 1569
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 31/114 (27%), Gaps = 37/114 (32%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI- 59
+LK D+F G GG+ L + ++ E + ++ N P L F +
Sbjct: 1127 ILKTLDIFAGCGGLSEGLTKAGASV---TKWAIEYEEPAGDAFRLNHPEALAFVHNCNVI 1183
Query: 60 ---------------------------------KTQDIPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 1184 LRAIMTACGDVDDCISTTEADEQAAKLDEEMIKNLPRPGQVDFINGGPPCQGFS 1237
>gi|261414302|gb|ACX83569.1| DNA methyltransferase [Hieracium piloselloides]
Length = 1547
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 31/114 (27%), Gaps = 37/114 (32%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI- 59
+LK D+F G GG+ L + ++ E + ++ N P L F +
Sbjct: 1106 ILKTLDIFAGCGGLSEGLTKAGASV---TKWAIEYEEPAGDAFRLNHPEALAFVHNCNVI 1162
Query: 60 ---------------------------------KTQDIPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 1163 LRAIMTACGDVDDCISTTEADEQAAKLDEEMIKNLPRPGQVDFINGGPPCQGFS 1216
>gi|323968851|gb|EGB64187.1| DNA-cytosine methyltransferase [Escherichia coli TA007]
Length = 282
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 31 FSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
FSSE + ++ KTY AN+ + DI KI +DIPDH++L+ GFPC FSQAG
Sbjct: 1 FSSEWDKFAQKTYHANYGDFPDG-DITKIDEKDIPDHEILVGGFPCVAFSQAG 52
>gi|328955052|ref|YP_004372385.1| DNA-cytosine methyltransferase [Coriobacterium glomerans PW2]
gi|328455376|gb|AEB06570.1| DNA-cytosine methyltransferase [Coriobacterium glomerans PW2]
Length = 353
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIKTQDI 64
+ F G G L ++++I+ + P+ L GDI+++ D+
Sbjct: 10 EFFAGSG-----LVGCGLAPWFRSVWANDISERKAAVYRANLDPSVLHVGDISRVSGADL 64
Query: 65 PDHDVLLAGFPCQPFSQAG 83
P + A FPCQ S AG
Sbjct: 65 PAASLSWASFPCQDLSLAG 83
>gi|302534627|ref|ZP_07286969.1| predicted protein [Streptomyces sp. C]
gi|302443522|gb|EFL15338.1| predicted protein [Streptomyces sp. C]
Length = 194
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI- 59
+L+I +L G GG+ + + + +E P +P+ GDI +I
Sbjct: 25 LLEILELCAGYGGLGMAVAPL---VGGRIAYVAESAPGPSAVLAERYPDAPNLGDIREID 81
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
TQ + DV+ AGFPCQ S AG
Sbjct: 82 WTQLVGKVDVITAGFPCQDISIAG 105
>gi|297800866|ref|XP_002868317.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp.
lyrata]
gi|297314153|gb|EFH44576.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp.
lyrata]
Length = 1506
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63
D+F G GG+ LE+ + ++ E + + ++ N P+ +F D + +
Sbjct: 1068 LDIFAGCGGLSYGLEKAGVS---DTKWAIEYEEPAAQAFKQNHPDATVFVDNCNVILRAI 1124
Query: 64 ---------------------------------IPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 1125 MEKGGDVDDCISTTEAAELAAKLDENQKSTLPLPGQVDFINGGPPCQGFS 1174
>gi|254244955|ref|ZP_04938277.1| hypothetical protein PA2G_05834 [Pseudomonas aeruginosa 2192]
gi|126198333|gb|EAZ62396.1| hypothetical protein PA2G_05834 [Pseudomonas aeruginosa 2192]
Length = 475
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
+ + GI ++ + +EI P+ + + A +
Sbjct: 5 ITYGSVCSGI----EAASVAWHMLGFRASWFAEIEPFPSAVLAQRWPAVPNLGDMTKLAR 60
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ I +L+ G PCQ FS AG
Sbjct: 61 EVLLGIIAAPLILVGGTPCQDFSVAG 86
>gi|291303703|ref|YP_003514981.1| C-5 cytosine-specific DNA methylase [Stackebrandtia nassauensis
DSM 44728]
gi|290572923|gb|ADD45888.1| C-5 cytosine-specific DNA methylase [Stackebrandtia nassauensis
DSM 44728]
Length = 552
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC-FFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
L I D FCG GG ++ VE ++ GDI K+
Sbjct: 3 LTIMDWFCGAGGSSQGID---AVPGVEVTLAANHWQLALDSHAANFPHVDHKIGDIRKLP 59
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
QD P D A C+ FS A
Sbjct: 60 VQDWPIADGFWASPECKKFSSA 81
>gi|268611959|ref|ZP_06145686.1| adenine/cytosine DNA methyltransferase [Ruminococcus flavefaciens
FD-1]
Length = 840
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 30/99 (30%), Gaps = 22/99 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
L LF G + R EC ++EI + + N G I
Sbjct: 9 LTYISLFSSAGVGCYGFKM----RGFECIATNEIVERRINVQKFNEKCKYETGYICGDIT 64
Query: 57 -------------AKIKTQDIPDHDVLLAGFPCQPFSQA 82
K + I + V++A PCQ S A
Sbjct: 65 EESVKQHLLGEVERWRKHEKINNVTVVVATPPCQGMSVA 103
>gi|219871980|ref|YP_002476355.1| moodification methylase HgaIA [Haemophilus parasuis SH0165]
gi|219692184|gb|ACL33407.1| moodification methylase HgaIA (M.HgaIA) (Cytosine-specific
methyltransferase HgaIA) (M.HgaI-1) [Haemophilus
parasuis SH0165]
Length = 357
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 16/92 (17%)
Query: 2 LKITDLFC--GIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAK 58
++ LF GIG E + ++ ++E I + + + ++ GDI
Sbjct: 5 IRGLSLFSSAGIG------EYFLSRVGIDIIVANELIKKRADLYQKIYPNHKMVIGDIRD 58
Query: 59 IKTQDI-------PDHDVLLAGFPCQPFSQAG 83
+ + D L+A PCQ S AG
Sbjct: 59 QRIFNKVLNIALTNQVDFLIASPPCQGMSVAG 90
>gi|296445050|ref|ZP_06887011.1| DNA-cytosine methyltransferase [Methylosinus trichosporium OB3b]
gi|296257471|gb|EFH04537.1| DNA-cytosine methyltransferase [Methylosinus trichosporium OB3b]
Length = 380
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 7/80 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKIKT 61
+ F G G +R C +++ + TL+ D+ ++
Sbjct: 4 TYYEFFAGGGMVR-----AGLGAGWRCLLANDFDARKCASYRANWGGETLVERDVRDLQA 58
Query: 62 QDIPD-HDVLLAGFPCQPFS 80
+P D++ A FPCQ S
Sbjct: 59 SQLPGLADLVWASFPCQDLS 78
>gi|213618692|ref|ZP_03372518.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
Length = 151
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55
+ DLF GIGGIR E +C F+SE N ++V+TY+AN+ +
Sbjct: 91 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHR 140
>gi|168070728|ref|XP_001786917.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162660176|gb|EDQ48269.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 290
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I +LF GIG R L + EI+ +V++Y A + +
Sbjct: 134 ILELFGGIGAPRKALINLGVE--HKAIDYVEIDEKAVRSYNAMYDRLHKPQSVVGWNL-- 189
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
D+L G PCQ +S++G
Sbjct: 190 --RPDILCHGSPCQDYSRSG 207
>gi|56385094|gb|AAV85978.1| 5' cytosine DNA methyl transferase-like protein [Pristionchus
pacificus]
Length = 313
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK---I 59
K+ + +CGIGGI L++T + +IN + Y+ NFP+T + + +
Sbjct: 11 KVLEFYCGIGGIHFALKRTSIP--FHIAAAFDINTTTNVIYRHNFPSTKLKESNIQGVSV 68
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D ++ PCQPF+ G
Sbjct: 69 SSLDKLGAELWTMSPPCQPFTLKG 92
>gi|15236676|ref|NP_192638.1| DNA (cytosine-5-)-methyltransferase, putative [Arabidopsis thaliana]
gi|7267541|emb|CAB78023.1| Met2-type cytosine DNA-methyltransferase-like protein [Arabidopsis
thaliana]
gi|332657308|gb|AEE82708.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
Length = 1512
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 32/110 (29%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---------------- 48
D+F G GG+ LE+ ++ E + ++ N P
Sbjct: 1074 LDIFAGCGGLSHGLEKAGVS---NTKWAIEYEEPAGHAFKQNHPEATVFVDNCNVILRAI 1130
Query: 49 ---NTLIFGDIAKIKTQD---------------IPDHDVLLAGFPCQPFS 80
+ ++ ++ + D + G PCQ FS
Sbjct: 1131 MEKCGDVDDCVSTVEAAELVAKLDENQKSTLPLPGQADFISGGPPCQGFS 1180
>gi|323139578|ref|ZP_08074623.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242]
gi|322395197|gb|EFX97753.1| DNA-cytosine methyltransferase [Methylocystis sp. ATCC 49242]
Length = 381
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--FGDIAK 58
M + F G G R L C F+++ + +YQAN+ GD+ K
Sbjct: 1 MPDFYEFFAGGGMARKGL-----GAGWTCQFANDFDHKKALSYQANWGTGGELLVGDVRK 55
Query: 59 IKTQDIP-DHDVLLAGFPCQPFS 80
+ +P D++ FPCQ S
Sbjct: 56 VTASQLPGCADLIWGSFPCQDLS 78
>gi|332306793|ref|YP_004434644.1| DNA-cytosine methyltransferase [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332174122|gb|AEE23376.1| DNA-cytosine methyltransferase [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 729
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 8/85 (9%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ----ANFPNTLIFGDIAK 58
D F GIG + + L + S + + Y+ N DI +
Sbjct: 4 TFVDFFAGIGLVEIGLT----NTGWHHLLSVDYSELKRDVYKLNFGKNHAEFYRCADIFE 59
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++P+ + A FPC S AG
Sbjct: 60 VDGTEVPESFLAHASFPCTDVSSAG 84
>gi|260579295|ref|ZP_05847178.1| modification methylase NaeI (cytosine-specificmethyltransferase
NaeI) (M.NaeI) [Corynebacterium jeikeium ATCC 43734]
gi|258602594|gb|EEW15888.1| modification methylase NaeI (cytosine-specificmethyltransferase
NaeI) (M.NaeI) [Corynebacterium jeikeium ATCC 43734]
Length = 372
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--IAKI 59
L ++ G GG L LE E++ ++V T +AN P I +
Sbjct: 36 LTSVEICAGAGGQALGLEAA----GFIHRAVVELDGHAVSTLRANRPAWNIVHGDVLDFD 91
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D D+L G PC PFS AG
Sbjct: 92 ISPFADDLDLLAGGVPCPPFSIAG 115
>gi|251773224|gb|EES53775.1| Site-specific DNA methylase-like protein [Leptospirillum
ferrodiazotrophum]
Length = 154
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIKTQD 63
++ G GG L LEQ + E++ ++ + + +I G++ K
Sbjct: 5 LEICAGAGGQALGLEQA----GFDHSALVELDHHACASLRLNRPGWNVIEGNLQSFKGTP 60
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
D+L G PC PFS+ G
Sbjct: 61 FKGIDLLAGGVPCPPFSKDG 80
>gi|85709919|ref|ZP_01040984.1| site-specific DNA-methyltransferase [Erythrobacter sp. NAP1]
gi|85688629|gb|EAQ28633.1| site-specific DNA-methyltransferase [Erythrobacter sp. NAP1]
Length = 356
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLFCG+G + L+Q + + ++ N +T D++K+ ++
Sbjct: 14 VVDLFCGVGALSHGLKQA----GFAIRAGYDTDRRCKFAFETNNDSTFHARDVSKLTAKE 69
Query: 64 IPDHD------VLLAGFPCQPFSQ 81
+ H VL PCQPFS
Sbjct: 70 VRAHFSGDKPSVLAGCAPCQPFST 93
>gi|4894862|gb|AAD32631.1|AF135438_1 de novo DNA methyltransferase 3 [Danio rerio]
Length = 842
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIA 57
+++ LF GI L L VE + +SEI+ S+ N +I
Sbjct: 558 IRVLSLFDGIATGYLVLRDLG--FKVEKYVASEIDEESITISMVNHDGKITQVDDVKNIT 615
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K + D+L+ G PC S
Sbjct: 616 KKHMEQWGPFDLLIGGSPCNDLSI 639
>gi|18202008|sp|O31073|MTS1_STRAH RecName: Full=Modification methylase SacI; Short=M.SacI; AltName:
Full=Cytosine-specific methyltransferase SacI
gi|2605794|gb|AAC97118.1| SacI methylase [Streptomyces achromogenes]
Length = 390
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 17/97 (17%)
Query: 4 ITDLFCGIGGIRLDLE--------QTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FG 54
+ LF G GG+ +E Q + + +++ ++ T ANFP+T G
Sbjct: 7 VISLFSGAGGLDCAIESCAEPPLVQDGSGSPLRVAVATDYEQTALDTLSANFPHTKTLCG 66
Query: 55 DIAKIKTQD--------IPDHDVLLAGFPCQPFSQAG 83
DI I T + D +++ G PC PFS++G
Sbjct: 67 DIQTIPTAELLEAGGLKPGDPTLVIGGPPCTPFSKSG 103
>gi|255573870|ref|XP_002527854.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223532778|gb|EEF34557.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1584
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 27/110 (24%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----VKTYQANFPNTLIFGDIAKI 59
D+F G GG+ LE+ ++ E + +A + I
Sbjct: 1127 LDIFAGCGGLSEGLERAGISV---TKWAIEYEEPAGEAFKQNHPEALMLINNCNVILRAI 1183
Query: 60 KTQDIPDHDVLL-----------------------------AGFPCQPFS 80
+ D + G PCQ FS
Sbjct: 1184 MSACGDADDCICTSEASELAEKLDEKEISNFPRPGEVEFINGGPPCQGFS 1233
>gi|330960676|gb|EGH60936.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 351
Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 28/83 (33%), Gaps = 10/83 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIAKI 59
DLFCG GG+ L + +I+ Y+ N I I +
Sbjct: 7 VDLFCGAGGLTAGL----LKTGISVRAGYDIDRNCEYAYRENNGAEFIAESVELTKIEDL 62
Query: 60 KTQDIPDH-DVLLAGFPCQPFSQ 81
P +L PCQPFS
Sbjct: 63 SAWYRPQRIKLLAGCAPCQPFST 85
>gi|145348185|ref|XP_001418536.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578765|gb|ABO96829.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 371
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ +++CG+G + L + E + ++NP + Y N+ + +
Sbjct: 29 LRVLEMYCGVGVMHAALRRARGDE-AEVCGAYDVNPNACDAYAMNYGTRPSQKSLVSVAM 87
Query: 62 QD--IPDHDVLLAGFPCQPFSQAG 83
+ + PCQPF++AG
Sbjct: 88 ETLVKTKAEAWAMSPPCQPFTRAG 111
>gi|46128541|ref|XP_388824.1| hypothetical protein FG08648.1 [Gibberella zeae PH-1]
Length = 602
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 24/86 (27%), Gaps = 10/86 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-----INPYSVKTYQANFPNTLIFGDI 56
+ D G GG+ + ++ + Y + I
Sbjct: 254 YTMFDSCSGAGGVSRGALMA----GFKIQYAIDKAPEVWETYETNFPDTELFRMPLDEFI 309
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82
A+ D+L PCQ FS A
Sbjct: 310 AE-PNVGHKRVDILHFSPPCQFFSPA 334
>gi|239927639|ref|ZP_04684592.1| DNA methylase [Streptomyces ghanaensis ATCC 14672]
gi|291435979|ref|ZP_06575369.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
gi|291338874|gb|EFE65830.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
Length = 387
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 27/80 (33%), Gaps = 5/80 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I DLF G G L E + + KT A T+ A
Sbjct: 2 IVDLFSGPRGWSEGLRLLGLSD-----VGLEWDTAACKTAHAAGHATIQCDVAAYPTVPF 56
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
L+A PCQ +S+AG
Sbjct: 57 AGRIKGLIASPPCQAWSRAG 76
>gi|262171500|ref|ZP_06039178.1| modification methylase PspPI (Cytosine-specific methyltransferase
PspPI) (M.PspPI) [Vibrio mimicus MB-451]
gi|261892576|gb|EEY38562.1| modification methylase PspPI (Cytosine-specific methyltransferase
PspPI) (M.PspPI) [Vibrio mimicus MB-451]
Length = 416
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKI- 59
K+ +LF G GG+ L +EQ ++ F +E++ Y+ +T ++ GDI+KI
Sbjct: 78 YKLVELFAGGGGLALGMEQA----GLQSIFLNELDKYACETLRHNRPEWNVVEGDISKID 133
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
T D+L GFPCQ FS AG
Sbjct: 134 FTTITEPVDILTGGFPCQAFSYAG 157
>gi|328774327|gb|EGF84364.1| hypothetical protein BATDEDRAFT_29368 [Batrachochytrium
dendrobatidis JAM81]
Length = 349
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
+K+ + + GIGG L +T H + + ++N + YQ P + +I +
Sbjct: 8 IKVLEFYSGIGGFHAALSKT--HIAFQVLQAFDMNINANLVYQTTHPTVPVSVRNIGFLS 65
Query: 61 TQ--DIPDHDVLLAGFPCQPFSQAG 83
D D+ L PCQP+S+ G
Sbjct: 66 PIDLDAFQADMFLLSPPCQPYSRKG 90
>gi|57506140|ref|ZP_00372061.1| adenine/cytosine DNA methyltransferase [Campylobacter upsaliensis
RM3195]
gi|57015535|gb|EAL52328.1| adenine/cytosine DNA methyltransferase [Campylobacter upsaliensis
RM3195]
Length = 817
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 35/99 (35%), Gaps = 21/99 (21%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI-AKI 59
+L LF G ++ EC ++E+ +K + N G I I
Sbjct: 6 VLTYISLFSSAGVGCYGFKEA----GFECIATNELLEKRLKIQKLNHKCKYENGYILGDI 61
Query: 60 KTQDIPDH----------------DVLLAGFPCQPFSQA 82
K Q+I + DVL+A PCQ S A
Sbjct: 62 KKQEIKNQIFNQIDLYKRLGNDKIDVLIATPPCQGMSVA 100
>gi|206579328|ref|YP_002239202.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae 342]
gi|206568386|gb|ACI10162.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae 342]
Length = 347
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 11/87 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
++ D+FCG GG+ L + +I+ + N NT + ++
Sbjct: 3 IQAVDIFCGAGGLTYGLRTA----GINVSHGIDIDESCRYVIEKNNENTEFVHRSVTELS 58
Query: 61 TQD------IPDHDVLLAGFPCQPFSQ 81
+ + + +L PCQPFS+
Sbjct: 59 SDEVSSMFQTGNVKLLAGCAPCQPFSK 85
>gi|255548992|ref|XP_002515552.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223545496|gb|EEF47001.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 404
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+I + + GIGG+R L + + + + +IN + Y+ NF + G+I +
Sbjct: 14 RILEFYSGIGGMRYSLMKAGVNA--KVMEAFDINNIANDAYEHNFGHRPYQGNIQSLTAA 71
Query: 63 --DIPDHDVLLAGFPCQPFSQAG 83
D L PCQP+++ G
Sbjct: 72 DLDSYAAHAWLLSPPCQPYTRQG 94
>gi|254368945|ref|ZP_04984958.1| predicted protein [Francisella tularensis subsp. holarctica
FSC022]
gi|157121866|gb|EDO66036.1| predicted protein [Francisella tularensis subsp. holarctica
FSC022]
Length = 69
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49
++K+ F G GG+ L E+ + +++E + +TY+ N PN
Sbjct: 4 IMKVVSFFSGAGGLDLGFERA----GFDIIWANEFDKEIWETYEKNHPN 48
>gi|209875617|ref|XP_002139251.1| DNA (cytosine-5)-methyltransferase domain-containing protein
[Cryptosporidium muris RN66]
gi|209554857|gb|EEA04902.1| DNA (cytosine-5)-methyltransferase domain-containing protein
[Cryptosporidium muris RN66]
Length = 422
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 1 MLKITDLFCGIGGIRLDLEQT-------FNHRNVECFFSSEINPYSVKTY-QANFPNTLI 52
ML +T L GIGG+ L L+ +++ + E+N Y + +
Sbjct: 1 MLNLTSL-DGIGGLHLSLKYAIEKLVEHGQAIDIKVIKAFELNENCNNIYKRHFKDTQVC 59
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + DIP ++ L G PCQPF++ G
Sbjct: 60 TKSIESLNIDDIPKANIWLLG-PCQPFTRGG 89
>gi|229847093|ref|ZP_04467198.1| modification methylase BepI-like protein [Haemophilus influenzae
7P49H1]
gi|229809922|gb|EEP45643.1| modification methylase BepI-like protein [Haemophilus influenzae
7P49H1]
Length = 395
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 24/71 (33%), Gaps = 14/71 (19%)
Query: 27 VECFFSSEINPYS-VKTYQANFPNTLIFGDIAKI-------------KTQDIPDHDVLLA 72
E F+++I P + +I + D D+L
Sbjct: 40 FETIFANDIKPDAKAAWVSYFLDQKANANEIYHLESIVDLVKKERETHNIFPKDIDILTG 99
Query: 73 GFPCQPFSQAG 83
GFPCQ FS AG
Sbjct: 100 GFPCQDFSVAG 110
>gi|213586034|ref|ZP_03367860.1| DNA cytosine methylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 112
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55
+ DLF GIGGIR E +C F+SE N ++V+TY+AN+ +
Sbjct: 25 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEWNKHAVRTYKANYFCDPLQHR 74
>gi|242041781|ref|XP_002468285.1| hypothetical protein SORBIDRAFT_01g043010 [Sorghum bicolor]
gi|241922139|gb|EER95283.1| hypothetical protein SORBIDRAFT_01g043010 [Sorghum bicolor]
Length = 576
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 16/94 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+ + LF GIGG + L + ++ S EI+ + + + T I
Sbjct: 453 MNVLSLFSGIGGAEVALHRL--DIRMKTVVSVEISETNRFVLRTWWNQTQTGTLIEITDV 510
Query: 60 ----------KTQDIPDHDVLLAGFPCQPFSQAG 83
+ I D+++ G PC AG
Sbjct: 511 QSLTTERLESCIRRIGGFDLVIGGSPCNN--LAG 542
>gi|218905512|ref|YP_002453346.1| modification methylase ScrFIB [Bacillus cereus AH820]
gi|218536933|gb|ACK89331.1| modification methylase ScrFIB [Bacillus cereus AH820]
Length = 324
Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M+KI +LF GIG R L + + + +A ++
Sbjct: 1 MIKILELFGGIGAPRKALVNLGIDHK-----AIDYVEWQANRVKAYNALYDHLHKPQDVR 55
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
++ D+L+ G PCQ S+A
Sbjct: 56 GWNLK-PDILVHGSPCQDNSRA 76
>gi|45357574|ref|NP_987131.1| DNA-cytosine methyltransferase [Methanococcus maripaludis S2]
gi|45047134|emb|CAF29567.1| C-5 cytosine-specific DNA methylase [Methanococcus maripaludis S2]
Length = 355
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 36/132 (27%), Gaps = 55/132 (41%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLFCG GG + + E++ + +Y N+ T+ + I
Sbjct: 1 MNFIDLFCGCGGFSRGF----VEMGFKPLLAIELDENAANSYALNYNGTVFEKKLNDILE 56
Query: 62 QDIPDH---------------------------------------------------DVL 70
+D+ DV+
Sbjct: 57 KDVYFKLEDFLVQDDIEEFKKSNNYENLNPVVINEDIREINSKYITNKIKDTSYSKIDVI 116
Query: 71 LAGFPCQPFSQA 82
+ G PC+ ++ A
Sbjct: 117 IGGPPCEGYTGA 128
>gi|311899150|dbj|BAJ31558.1| putative modification methylase [Kitasatospora setae KM-6054]
Length = 430
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 33/104 (31%), Gaps = 26/104 (25%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN-----------FPNT 50
L ++ G GG + L + EI+ ++VKT + N +
Sbjct: 8 LTSIEICAGAGGQAVGLHKA----GFSHLALVEIDQHAVKTLRKNVERPPRGGEDPWGWE 63
Query: 51 LIFGDI-----------AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I K+ +L G PC PFS AG
Sbjct: 64 RDNCLILERDVKEFKPSEKLPDLKPGQLTLLAGGVPCPPFSIAG 107
>gi|297727887|ref|NP_001176307.1| Os11g0109200 [Oryza sativa Japonica Group]
gi|77548342|gb|ABA91139.1| hypothetical protein LOC_Os11g01810 [Oryza sativa Japonica Group]
gi|255679702|dbj|BAH95035.1| Os11g0109200 [Oryza sativa Japonica Group]
Length = 473
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 16/94 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
+ + LF GIGG + L + ++ EI+ ++ ++ + T I
Sbjct: 308 MNVLSLFSGIGGAEVALHRLGIC--MKTVVLVEISEVNMTLLRSWWDQTQTGTLIEIADV 365
Query: 59 ---------IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + D+++ G PC AG
Sbjct: 366 QNLTAERIELFIRRFGGFDLVIGGSPCNN--LAG 397
>gi|300728105|ref|ZP_07061477.1| modification methylase HgaIA [Prevotella bryantii B14]
gi|299774619|gb|EFI71239.1| modification methylase HgaIA [Prevotella bryantii B14]
Length = 382
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 11/90 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-NPYSVKTYQANFPNTLIFGDIAK-- 58
++I LF IG + +V ++E + +T+I GDI
Sbjct: 4 MRIVSLFANIG---VAEACFQELDDVNVVVANEWLTKRAKLYQSIYPESTMICGDITDEN 60
Query: 59 -----IKTQDIPDHDVLLAGFPCQPFSQAG 83
++ D ++A PCQ S AG
Sbjct: 61 IYQQILQACRRERVDTIMATPPCQGMSTAG 90
>gi|20531191|gb|AAM27409.1|AF500228_1 RIP defective [Neurospora intermedia]
Length = 839
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 24/84 (28%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV---KTYQANFPNTLIFGDIAK 58
D F G GG + H + ++V + I
Sbjct: 288 YTAGDTFAGAGGASRGITDAGVHLEF----CVDNWEHAVASLNANFQDTTIHDIDMHEFI 343
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQA 82
+ + D+L PCQ +S A
Sbjct: 344 VDKEIRHRVDILHLSPPCQVWSPA 367
>gi|325965496|ref|YP_004243400.1| DNA-methyltransferase Dcm [Arthrobacter phenanthrenivorans Sphe3]
gi|323471583|gb|ADX75266.1| DNA-methyltransferase Dcm [Arthrobacter phenanthrenivorans Sphe3]
Length = 389
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 24/106 (22%)
Query: 2 LKITDLFCGIGGIRLDLE---QTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------ 52
++ +LF G GG+ L Q + ++++ + + KTY+ N
Sbjct: 6 YRMGELFSGPGGMALGARLAAQAVEGVALRHAWANDYDLDTCKTYKRNILVPEYGDDAKL 65
Query: 53 ---------------FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ + + + + D GFPC +S G
Sbjct: 66 VESAADLPAAGGGVVHQNVHTLDIEALGEIDGFAFGFPCNDYSLVG 111
>gi|15600968|ref|NP_232598.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae O1
biovar eltor str. N16961]
gi|121586752|ref|ZP_01676535.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae
2740-80]
gi|121727743|ref|ZP_01680831.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae V52]
gi|147671623|ref|YP_001215865.1| putative site-specific DNA-methyltransferase [Vibrio cholerae O395]
gi|153816788|ref|ZP_01969455.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae NCTC
8457]
gi|153823195|ref|ZP_01975862.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae B33]
gi|227811822|ref|YP_002811832.1| putative site-specific DNA-methyltransferase [Vibrio cholerae
M66-2]
gi|254850603|ref|ZP_05239953.1| cytosine-specific DNA methyltransferase [Vibrio cholerae MO10]
gi|255745992|ref|ZP_05419939.1| site-specific DNA-methyltransferase putative [Vibrio cholera CIRS
101]
gi|262162170|ref|ZP_06031185.1| site-specific DNA-methyltransferase putative [Vibrio cholerae INDRE
91/1]
gi|262167363|ref|ZP_06035072.1| site-specific DNA-methyltransferase putative [Vibrio cholerae RC27]
gi|298500051|ref|ZP_07009857.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9657591|gb|AAF96111.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|114326101|gb|ABI64146.1| cytosine-specific DNA methyltransferase [Vibrio cholerae O395]
gi|121549049|gb|EAX59086.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae
2740-80]
gi|121629960|gb|EAX62370.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae V52]
gi|126512591|gb|EAZ75185.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae NCTC
8457]
gi|126519283|gb|EAZ76506.1| site-specific DNA-methyltransferase, putative [Vibrio cholerae B33]
gi|146314006|gb|ABQ18546.1| putative site-specific DNA-methyltransferase [Vibrio cholerae O395]
gi|227010964|gb|ACP07175.1| putative site-specific DNA-methyltransferase [Vibrio cholerae
M66-2]
gi|227014870|gb|ACP11079.1| putative site-specific DNA-methyltransferase [Vibrio cholerae O395]
gi|254846308|gb|EET24722.1| cytosine-specific DNA methyltransferase [Vibrio cholerae MO10]
gi|255735746|gb|EET91144.1| site-specific DNA-methyltransferase putative [Vibrio cholera CIRS
101]
gi|262024247|gb|EEY42939.1| site-specific DNA-methyltransferase putative [Vibrio cholerae RC27]
gi|262028245|gb|EEY46903.1| site-specific DNA-methyltransferase putative [Vibrio cholerae INDRE
91/1]
gi|297542032|gb|EFH78083.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 383
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 34/101 (33%), Gaps = 25/101 (24%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--------LIFGD 55
I F G G + L E + + F +E + + Y+ + + G
Sbjct: 19 IFSFFAGSGFLDLGFETS----GFDVRFVNEFHKPFLDAYKYSREHMGLPKPKYGHYLGS 74
Query: 56 IAKIKTQDIPD--HDVL-----------LAGFPCQPFSQAG 83
I T + +D++ + G PC FS AG
Sbjct: 75 IDDFVTGEKKQLLYDLVQEAKSEALTGFIGGPPCPDFSVAG 115
>gi|262201418|ref|YP_003272626.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247]
gi|262084765|gb|ACY20733.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247]
Length = 342
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 11/85 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKTQ 62
+ D F G GG ++ + +P + + ++ I GDI + T+
Sbjct: 8 VVDFFSGCGGTSAGFRSA----GMQIAAGLDSDPDASATFKRNFKKSSFIEGDIRNVSTE 63
Query: 63 DI------PDHDVLLAGFPCQPFSQ 81
+ + PCQPFS+
Sbjct: 64 QVSDVVPSGAVTLFAGCAPCQPFSR 88
>gi|169608972|ref|XP_001797905.1| hypothetical protein SNOG_07571 [Phaeosphaeria nodorum SN15]
gi|160701754|gb|EAT85037.2| hypothetical protein SNOG_07571 [Phaeosphaeria nodorum SN15]
Length = 403
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L D+FCG GG +Q + + + + +++ Y+ N L F A
Sbjct: 321 LTFGDVFCGAGGSSQGAKQA----GLSIKWGLDFDDDAIEAYELNHTGALPFNCSAHDFP 376
Query: 62 QDIPDH-----DVLLAGFPCQPFSQA 82
+ DV+ PC FS A
Sbjct: 377 PEGYTSEQLRVDVVHLSPPCCFFSPA 402
>gi|323454079|gb|EGB09949.1| hypothetical protein AURANDRAFT_62427 [Aureococcus anophagefferens]
Length = 634
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+LF GIGG R LE + EI + + Y ANF + +
Sbjct: 186 TFAELFAGIGGFRAGLEAAAGAP-PAPAVACEILESARRIYAANFGAESLTAA-PVQRLD 243
Query: 63 DIPDHDVLLAGFPCQPFS-QAG 83
+P D+L+AGFPCQ ++ QAG
Sbjct: 244 RLPACDLLMAGFPCQSYTEQAG 265
>gi|326775654|ref|ZP_08234919.1| C-5 cytosine-specific DNA methylase [Streptomyces cf. griseus
XylebKG-1]
gi|326655987|gb|EGE40833.1| C-5 cytosine-specific DNA methylase [Streptomyces cf. griseus
XylebKG-1]
Length = 324
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
L G+G + +E +E +P++ + P G I +I
Sbjct: 8 TAISLCSGVGALDKAVENL---TGAATAVYAEKDPWAAQVMAGLLPGVENLGSIDEINYA 64
Query: 63 D----IPDHDVLLAGFPCQPFSQAG 83
D PD D L+AG+PCQ S G
Sbjct: 65 DVAATYPDLDTLIAGWPCQGISNNG 89
>gi|317148994|ref|XP_001823049.2| C-5 cytosine methyltransferase DmtA [Aspergillus oryzae RIB40]
Length = 614
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI- 59
D FCG GG+ + + ++ + + ++ TY+ NF + DI
Sbjct: 316 YTFGDGFCGAGGVSCGARRAGLYNK----WAFDNSEHATSTYRLNFEHAYCELSDIFSFL 371
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQA 82
+ DV + PCQ +S A
Sbjct: 372 TSNDEFLRVDVSHSSPPCQTWSSA 395
>gi|238494284|ref|XP_002378378.1| C-5 cytosine methyltransferase DmtA [Aspergillus flavus NRRL3357]
gi|220695028|gb|EED51371.1| C-5 cytosine methyltransferase DmtA [Aspergillus flavus NRRL3357]
Length = 468
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI- 59
D FCG GG+ + + ++ + + ++ TY+ NF + DI
Sbjct: 304 YTFGDGFCGAGGVSCGARRAGLYNK----WAFDNSEHATSTYRLNFEHAYCELSDIFSFL 359
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQA 82
+ DV + PCQ +S A
Sbjct: 360 TSNDEFLRVDVSHSSPPCQTWSSA 383
>gi|83771786|dbj|BAE61916.1| unnamed protein product [Aspergillus oryzae]
Length = 586
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKI- 59
D FCG GG+ + + ++ + + ++ TY+ NF + DI
Sbjct: 316 YTFGDGFCGAGGVSCGARRAGLYNK----WAFDNSEHATSTYRLNFEHAYCELSDIFSFL 371
Query: 60 -KTQDIPDHDVLLAGFPCQPFSQA 82
+ DV + PCQ +S A
Sbjct: 372 TSNDEFLRVDVSHSSPPCQTWSSA 395
>gi|303324183|ref|XP_003072079.1| C-5 cytosine methyltransferase DmtA, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240111789|gb|EER29934.1| C-5 cytosine methyltransferase DmtA, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 535
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
D FCG GG+ Q H + + P ++ TY+ ++
Sbjct: 271 YTFGDGFCGAGGVSRGALQAGLH----VRWGFDKCPKAMDTYRLNFRTAVGETCEVVHFL 326
Query: 61 TQDIP--DHDVLLAGFPCQPFSQA 82
T + D++ PCQ FS A
Sbjct: 327 TNETKDIMVDIMHFSPPCQTFSPA 350
>gi|164429650|ref|XP_001728555.1| hypothetical protein NCU11205 [Neurospora crassa OR74A]
gi|157073563|gb|EDO65464.1| hypothetical protein NCU11205 [Neurospora crassa OR74A]
Length = 654
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 23/86 (26%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----VKTYQANFPNTLIFGDI 56
D F G GG + H + ++ + I
Sbjct: 93 YTAGDTFAGAGGASRGITDAGVHLEF----CVDNWEHAVASLNANFQGQDTTTYDIDMHN 148
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ + D+L PCQ +S A
Sbjct: 149 FIVNKEIRHRVDILHLSPPCQVWSPA 174
>gi|15236413|ref|NP_193150.1| DMT2 (DNA METHYLTRANSFERASE 2); DNA (cytosine-5-)-methyltransferase/
DNA binding / protein binding [Arabidopsis thaliana]
gi|2244770|emb|CAB10193.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|7268119|emb|CAB78456.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|332657979|gb|AEE83379.1| DNA methyltransferase 2 [Arabidopsis thaliana]
Length = 1519
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 31/110 (28%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---------------- 48
D+F G GG+ LE ++ E + ++ N P
Sbjct: 1081 LDIFAGCGGLSHGLENAGVST---TKWAIEYEEPAGHAFKQNHPEATVFVDNCNVILRAI 1137
Query: 49 ---NTLIFGDIAKIKTQD---------------IPDHDVLLAGFPCQPFS 80
+ ++ ++ + D + G PCQ FS
Sbjct: 1138 MEKCGDVDDCVSTVEAAELAAKLDENQKSTLPLPGQVDFINGGPPCQGFS 1187
>gi|16945407|emb|CAC10091.2| related to cytosine C5-DNA methyltransferase [Neurospora crassa]
Length = 742
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 23/86 (26%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----VKTYQANFPNTLIFGDI 56
D F G GG + H + ++ + I
Sbjct: 284 YTAGDTFAGAGGASRGITDAGVHLEF----CVDNWEHAVASLNANFQGQDTTTYDIDMHN 339
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ + D+L PCQ +S A
Sbjct: 340 FIVNKEIRHRVDILHLSPPCQVWSPA 365
>gi|20531189|gb|AAM27408.1|AF500227_1 RIP defective [Neurospora crassa]
Length = 845
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 23/86 (26%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----VKTYQANFPNTLIFGDI 56
D F G GG + H + ++ + I
Sbjct: 284 YTAGDTFAGAGGASRGITDAGVHLEF----CVDNWEHAVASLNANFQGQDTTTYDIDMHN 339
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ + D+L PCQ +S A
Sbjct: 340 FIVNKEIRHRVDILHLSPPCQVWSPA 365
>gi|6523846|gb|AAF14882.1|AF138283_1 cytosine-5 methyltransferase [Arabidopsis thaliana]
Length = 1517
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 31/110 (28%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---------------- 48
D+F G GG+ LE ++ E + ++ N P
Sbjct: 1079 LDIFAGCGGLSHGLENAGVST---TKWAIEYEEPAGHAFKQNHPEATVFVDNCNVILRAI 1135
Query: 49 ---NTLIFGDIAKIKTQD---------------IPDHDVLLAGFPCQPFS 80
+ ++ ++ + D + G PCQ FS
Sbjct: 1136 MEKCGDVDDCVSTVEAAELAAKLDENQKSTLPLPGQVDFINGGPPCQGFS 1185
>gi|194098027|ref|YP_002001075.1| methylase [Neisseria gonorrhoeae NCCP11945]
gi|239998490|ref|ZP_04718414.1| methylase [Neisseria gonorrhoeae 35/02]
gi|240013615|ref|ZP_04720528.1| methylase [Neisseria gonorrhoeae DGI18]
gi|240016054|ref|ZP_04722594.1| methylase [Neisseria gonorrhoeae FA6140]
gi|240080196|ref|ZP_04724739.1| methylase [Neisseria gonorrhoeae FA19]
gi|240112409|ref|ZP_04726899.1| methylase [Neisseria gonorrhoeae MS11]
gi|240115149|ref|ZP_04729211.1| methylase [Neisseria gonorrhoeae PID18]
gi|240117433|ref|ZP_04731495.1| methylase [Neisseria gonorrhoeae PID1]
gi|240120685|ref|ZP_04733647.1| methylase [Neisseria gonorrhoeae PID24-1]
gi|240122989|ref|ZP_04735945.1| methylase [Neisseria gonorrhoeae PID332]
gi|240125241|ref|ZP_04738127.1| methylase [Neisseria gonorrhoeae SK-92-679]
gi|240127695|ref|ZP_04740356.1| methylase [Neisseria gonorrhoeae SK-93-1035]
gi|254493209|ref|ZP_05106380.1| methylase [Neisseria gonorrhoeae 1291]
gi|260441033|ref|ZP_05794849.1| methylase [Neisseria gonorrhoeae DGI2]
gi|268594349|ref|ZP_06128516.1| methylase [Neisseria gonorrhoeae 35/02]
gi|268596345|ref|ZP_06130512.1| methylase [Neisseria gonorrhoeae FA19]
gi|268598472|ref|ZP_06132639.1| methylase [Neisseria gonorrhoeae MS11]
gi|268600825|ref|ZP_06134992.1| methylase [Neisseria gonorrhoeae PID18]
gi|268603130|ref|ZP_06137297.1| methylase [Neisseria gonorrhoeae PID1]
gi|268681611|ref|ZP_06148473.1| methylase [Neisseria gonorrhoeae PID332]
gi|268683839|ref|ZP_06150701.1| methylase [Neisseria gonorrhoeae SK-92-679]
gi|268686080|ref|ZP_06152942.1| methylase [Neisseria gonorrhoeae SK-93-1035]
gi|291044365|ref|ZP_06570074.1| methylase [Neisseria gonorrhoeae DGI2]
gi|293399551|ref|ZP_06643704.1| methylase [Neisseria gonorrhoeae F62]
gi|193933317|gb|ACF29141.1| methylase [Neisseria gonorrhoeae NCCP11945]
gi|226512249|gb|EEH61594.1| methylase [Neisseria gonorrhoeae 1291]
gi|268547738|gb|EEZ43156.1| methylase [Neisseria gonorrhoeae 35/02]
gi|268550133|gb|EEZ45152.1| methylase [Neisseria gonorrhoeae FA19]
gi|268582603|gb|EEZ47279.1| methylase [Neisseria gonorrhoeae MS11]
gi|268584956|gb|EEZ49632.1| methylase [Neisseria gonorrhoeae PID18]
gi|268587261|gb|EEZ51937.1| methylase [Neisseria gonorrhoeae PID1]
gi|268621895|gb|EEZ54295.1| methylase [Neisseria gonorrhoeae PID332]
gi|268624123|gb|EEZ56523.1| methylase [Neisseria gonorrhoeae SK-92-679]
gi|268626364|gb|EEZ58764.1| methylase [Neisseria gonorrhoeae SK-93-1035]
gi|291011259|gb|EFE03255.1| methylase [Neisseria gonorrhoeae DGI2]
gi|291610120|gb|EFF39242.1| methylase [Neisseria gonorrhoeae F62]
gi|317163768|gb|ADV07309.1| methylase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 112
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 5/72 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV-KTYQANFPNTLIFGDIAKIK 60
DLF GIGG R+ ++ + E FSSE + + + +IK
Sbjct: 40 FTFIDLFAGIGGFRIAMQ----NLGGEYVFSSEWDEKAKLTYEANFGEVPFGDITLEEIK 95
Query: 61 TQDIPDHDVLLA 72
DVL
Sbjct: 96 QYIPKQFDVLCG 107
>gi|167560986|ref|ZP_02353902.1| site-specific DNA-methyltransferase [Burkholderia oklahomensis
EO147]
Length = 355
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
DLFCG+GG+ L ++ +I+ ++AN + D+ K+K ++I
Sbjct: 17 VDLFCGVGGLTHGL----VRGGIQVSAGIDIDTSCKFPFEANNSAVFLERDVGKLKAEEI 72
Query: 65 PDH------DVLLAGFPCQPFSQ 81
+L PCQPFS
Sbjct: 73 APFYEGADITLLAGCAPCQPFST 95
>gi|83310850|ref|YP_421114.1| site-specific DNA methylase [Magnetospirillum magneticum AMB-1]
gi|82945691|dbj|BAE50555.1| Site-specific DNA methylase [Magnetospirillum magneticum AMB-1]
Length = 406
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 22/83 (26%), Gaps = 8/83 (9%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINP------YSVKTYQANFPNTLIFGDIAKIK 60
L G GG+ L L E + + +
Sbjct: 3 LCAGAGGLELGLHIAL--PGYRTVGYVEREAGAAATLVARMADASLDTAPVWDDVATFDG 60
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
D++ G+PCQ S AG
Sbjct: 61 RPWRGIVDLVSGGYPCQGESNAG 83
>gi|233770212|gb|ACQ91179.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 1557
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 29/110 (26%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---------------- 48
D+F G GG+ L Q ++ E + + +Q N P
Sbjct: 1119 LDIFAGCGGLSEGLHQAGVSI---TKWAIEYEEPAGQAFQLNHPESKVFINNCNVILKAV 1175
Query: 49 ---NTLIFGDIAKIKTQD---------------IPDHDVLLAGFPCQPFS 80
I+ D D + G PCQ FS
Sbjct: 1176 MDKCGDTDDCISTTDANDLASALDEKEKSDLPLPGQVDFINGGPPCQGFS 1225
>gi|233770210|gb|ACQ91178.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 1565
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 29/110 (26%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---------------- 48
D+F G GG+ L Q ++ E + + +Q N P
Sbjct: 1127 LDIFAGCGGLSEGLHQAGVSI---TKWAIEYEEPAGQAFQLNHPESKVFINNCNVILKAV 1183
Query: 49 ---NTLIFGDIAKIKTQD---------------IPDHDVLLAGFPCQPFS 80
I+ D D + G PCQ FS
Sbjct: 1184 MDKCGDTDDCISTTDANDLASALDEKEKSDLPLPGQVDFINGGPPCQGFS 1233
>gi|262118158|ref|YP_003275928.1| C-5 cytosine-specific DNA methylase [Gordonia bronchialis DSM
43247]
gi|262088068|gb|ACY24035.1| C-5 cytosine-specific DNA methylase [Gordonia bronchialis DSM
43247]
Length = 652
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------ 56
DLF G GG+ L +E+ ++ N Y V+ ++AN P+ +
Sbjct: 25 TALDLFSGFGGLTLGIEKA----GFTTILAANHNQYKVEVHEANHPHVQHWIADLINPEV 80
Query: 57 -AKIKTQDIPDHDVLLAGFPCQPFSQA 82
A +D+P D+L+AG C SQA
Sbjct: 81 PAYHSVRDLPAADLLVAGVTCTNHSQA 107
>gi|20531193|gb|AAM27410.1|AF500229_1 RIP defective [Neurospora tetrasperma]
Length = 820
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 23/86 (26%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----VKTYQANFPNTLIFGDI 56
D F G GG + H + ++ + I
Sbjct: 281 YTAGDTFAGAGGASRGITDAGVHLEF----CVDNWEHAVASLNANFQGQDTTIYDIDMHN 336
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ + D+L PCQ +S A
Sbjct: 337 FIVDKEIRHRVDILHLSPPCQVWSPA 362
>gi|311104267|ref|YP_003977120.1| methyltransferase [Achromobacter xylosoxidans A8]
gi|310758956|gb|ADP14405.1| cytosine-specific methyltransferase [Achromobacter xylosoxidans
A8]
Length = 536
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----AKI 59
+ GI + + ++E + +EI P+ +P GD+ ++
Sbjct: 16 YGSVCSGI----EAVSLAWQPLDLEAAWFAEIEPFPSAVLAHRYPRVPNLGDMTAIARQV 71
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ +P D+L+ G PCQ FS AG
Sbjct: 72 RAGTVPAPDILVGGTPCQSFSVAG 95
>gi|256374317|ref|YP_003097977.1| DNA (cytosine-5-)-methyltransferase [Actinosynnema mirum DSM 43827]
gi|255918620|gb|ACU34131.1| DNA (cytosine-5-)-methyltransferase [Actinosynnema mirum DSM 43827]
Length = 404
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 21/98 (21%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE--INPYSVKTYQANFPNTLIFG----- 54
K+ DLF G GG+ L HR+ +++ I S N
Sbjct: 6 YKVVDLFSGAGGMSLGFRT---HRDFTVVGAADAQIGKPSSPLGSLRCNNVYRDNIGIDP 62
Query: 55 -----------DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ ++ + DVL+A PC F++
Sbjct: 63 LQVDLGRIDPAVLREVWGLRRGELDVLVACPPCSGFTR 100
>gi|302918673|ref|XP_003052704.1| hypothetical protein NECHADRAFT_35564 [Nectria haematococca mpVI
77-13-4]
gi|256733644|gb|EEU46991.1| hypothetical protein NECHADRAFT_35564 [Nectria haematococca mpVI
77-13-4]
Length = 614
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 25/86 (29%), Gaps = 11/86 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-----INPYSVKTYQANFPNTLIFGDI 56
+ D G GG+ + ++ + + Y + + +
Sbjct: 251 YTLFDSCSGAGGVSRGALMA----GFKIQYAIDKAPEVWDTYETNFPDTHLFKMSLDEFL 306
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ DVL PCQ FS A
Sbjct: 307 SF--DNQHMRVDVLHFSPPCQFFSPA 330
>gi|119173265|ref|XP_001239116.1| hypothetical protein CIMG_10138 [Coccidioides immitis RS]
Length = 626
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
D FCG GG+ Q H + + P ++ TY+ ++
Sbjct: 328 YTFGDGFCGAGGVSRGALQAGLH----VRWGFDKCPKAMDTYRLNFRTAVGETCEVVHFL 383
Query: 61 TQDIP--DHDVLLAGFPCQPFSQA 82
T + D++ PCQ FS A
Sbjct: 384 TNETKDIMVDIMHFSPPCQTFSPA 407
>gi|17225548|gb|AAL37469.1|AF328924_2 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 107
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 11/86 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
KI DLFCG GG LE + + + ++ T++ N N +
Sbjct: 3 YKILDLFCGAGGFSAGLEYLKE---FDALIGLDCDKQALITFENNHKNAIGVCGDITQTE 59
Query: 62 QDIPDHDV--------LLAGFPCQPF 79
++ ++ G PCQ F
Sbjct: 60 IKEKVIELAKKLEINMIIGGPPCQGF 85
>gi|209550032|ref|YP_002281949.1| C-5 cytosine-specific DNA methylase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535788|gb|ACI55723.1| C-5 cytosine-specific DNA methylase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 646
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 5/86 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+K+ DL CG GG ++ +E + + DIA +
Sbjct: 5 IKVADLLCGAGGSSAGAKRALEEMGLEMELVCVNHWPTAIDTHQRNFPEARHYIQDIATV 64
Query: 60 KTQ---DIPDHDVLLAGFPCQPFSQA 82
+ D+L+A C S A
Sbjct: 65 RPHILVPEGYLDLLMASPTCTHHSVA 90
>gi|167621147|ref|ZP_02389778.1| site-specific DNA-methyltransferase [Burkholderia thailandensis
Bt4]
Length = 355
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
DLFCG+GG+ L ++ +I+ ++AN + D+ K+K ++I
Sbjct: 17 VDLFCGVGGLTHGL----VRGGIQVSAGIDIDTSCKFPFEANNSAVFLERDVGKLKAEEI 72
Query: 65 PDH------DVLLAGFPCQPFSQ 81
+L PCQPFS
Sbjct: 73 APFYEGADITLLAGCAPCQPFST 95
>gi|289657684|gb|ADD14583.1| DNA methyltransferase 3B [Anolis carolinensis]
Length = 852
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L VE + +SEI S+ ++ N +I
Sbjct: 574 IRVLSLFDGIATGYLVLRDLG--IKVEKYVASEICEESIAVGTVRHEGNITYVHDVRNIT 631
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K + D+++ G PC S
Sbjct: 632 KRNIDEWGPFDLVIGGSPCNDLSI 655
>gi|239982029|ref|ZP_04704553.1| DNA modification methylase [Streptomyces albus J1074]
gi|291453880|ref|ZP_06593270.1| C-5 cytosine-specific DNA methylase [Streptomyces albus J1074]
gi|291356829|gb|EFE83731.1| C-5 cytosine-specific DNA methylase [Streptomyces albus J1074]
Length = 409
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 29/115 (25%), Gaps = 37/115 (32%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV------KTYQANFPNTLIFGD 55
L ++ G GG + L + EI+P++ +
Sbjct: 7 LTSIEICAGAGGQAVGLHGA----DFRHLALVEIDPHAAATLARNVRKHPQWAWEREHCL 62
Query: 56 IAKIKTQDIPDH---------------------------DVLLAGFPCQPFSQAG 83
I D D+L G PC PFS AG
Sbjct: 63 IINEDVNDFKPLERVPNPVKAQGKAGSPKQAEFLKPGDLDLLAGGVPCPPFSAAG 117
>gi|126293841|ref|XP_001362485.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase 3 beta
[Monodelphis domestica]
Length = 756
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ V+ + +SEI S+ ++ N +I
Sbjct: 478 IRVLSLFDGIATGYLVLKELG--IKVDKYIASEICEDSIAVGTVKHEGNIKYVHDVRNIT 535
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K + + D+L+ G PC S
Sbjct: 536 KRQIDEWGPFDLLIGGSPCNDLSN 559
>gi|284030140|ref|YP_003380071.1| C-5 cytosine-specific DNA methylase [Kribbella flavida DSM 17836]
gi|283809433|gb|ADB31272.1| C-5 cytosine-specific DNA methylase [Kribbella flavida DSM 17836]
Length = 514
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG-DIAKIK 60
L +TDLFCG GG V ++ +V+T+ +N P T D+++++
Sbjct: 3 LTMTDLFCGAGGSSTG---AVQVPGVTVKLAANHWKLAVETHNSNHPGTDHDCADLSQVE 59
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
+ P +VL A C SQA
Sbjct: 60 PRRYPRTNVLWASPECTNHSQA 81
>gi|224060119|ref|XP_002300046.1| DNA methyltransferase [Populus trichocarpa]
gi|222847304|gb|EEE84851.1| DNA methyltransferase [Populus trichocarpa]
Length = 344
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI---NPYSVKTYQANFPNTLIFGDIAK 58
+ + LF GIGG + L + + S EI N + + T I
Sbjct: 219 INVLSLFSGIGGAEVALHRLGIRL--KNVVSVEISNVNRSIMSCWWEQTNQTGNLIHIED 276
Query: 59 IKT----------QDIPDHDVLLAGFPCQPFSQAG 83
++ D+++ G PC AG
Sbjct: 277 VQHLTADRLEQLMNMYGSFDLVVGGSPCNN--LAG 309
>gi|312794286|ref|YP_004027209.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181426|gb|ADQ41596.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 419
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 31/130 (23%), Gaps = 55/130 (42%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------------- 50
DLF G GG+ + + E + Y +T Q
Sbjct: 9 VDLFAGAGGLMEGFRRA----GINFIAHVEKDKYCCQTLQTRLIYHFLRENGEEDLYYKY 64
Query: 51 ------------------------------------LIFGDIAKIKTQDI-PDHDVLLAG 73
I I + + + D+L+ G
Sbjct: 65 LYGEITREEFVNLYPDEFGQISKTIINIEINDKTLPYIVDRINCLMREKGLKNIDLLIGG 124
Query: 74 FPCQPFSQAG 83
PCQ +S G
Sbjct: 125 PPCQAYSLVG 134
>gi|325203406|gb|ADY98859.1| Modification methylase HgaIA [Neisseria meningitidis M01-240355]
Length = 862
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 17/93 (18%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61
LF G + EC ++E+ +K + N G IA T
Sbjct: 41 TYISLFSSAGVGCYGFKT----NGFECVATNELLEKRLKIQKYNQKCRFDSGYIAGDITL 96
Query: 62 ------------QDIPDHDVLLAGFPCQPFSQA 82
+ + DV++A PCQ S A
Sbjct: 97 PETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 129
>gi|325197576|gb|ADY93032.1| Modification methylase HgaIA [Neisseria meningitidis G2136]
Length = 862
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 17/93 (18%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61
LF G + EC ++E+ +K + N G IA T
Sbjct: 41 TYISLFSSAGVGCYGFKT----NGFECVATNELLEKRLKIQKYNQKCRFDSGYIAGDITL 96
Query: 62 ------------QDIPDHDVLLAGFPCQPFSQA 82
+ + DV++A PCQ S A
Sbjct: 97 PETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 129
>gi|325143130|gb|EGC65477.1| Modification methylase HgaIA [Neisseria meningitidis 961-5945]
Length = 862
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 17/93 (18%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61
LF G + EC ++E+ +K + N G IA T
Sbjct: 41 TYISLFSSAGVGCYGFKT----NGFECVATNELLEKRLKIQKYNQKCRFDSGYIAGDITL 96
Query: 62 ------------QDIPDHDVLLAGFPCQPFSQA 82
+ + DV++A PCQ S A
Sbjct: 97 PETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 129
>gi|325131565|gb|EGC54272.1| adenine/cytosine DNA methyltransferase [Neisseria meningitidis
M6190]
Length = 877
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 17/93 (18%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61
LF G + EC ++E+ +K + N G IA T
Sbjct: 56 TYISLFSSAGVGCYGFKT----NGFECVATNELLEKRLKIQKYNQKCRFDSGYIAGDITL 111
Query: 62 ------------QDIPDHDVLLAGFPCQPFSQA 82
+ + DV++A PCQ S A
Sbjct: 112 PETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 144
>gi|309379751|emb|CBX21527.1| putative DNA cytosine methyltransferase [Neisseria lactamica
Y92-1009]
Length = 612
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 17/93 (18%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61
LF G + EC ++E+ +K + N G IA T
Sbjct: 41 TYISLFSSAGVGCYGFKT----NGFECVATNELLEKRLKIQKYNQKCRFDSGYIAGDITL 96
Query: 62 ------------QDIPDHDVLLAGFPCQPFSQA 82
+ + DV++A PCQ S A
Sbjct: 97 PETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 129
>gi|304389119|ref|ZP_07371161.1| adenine/cytosine DNA methyltransferase [Neisseria meningitidis ATCC
13091]
gi|304336918|gb|EFM03110.1| adenine/cytosine DNA methyltransferase [Neisseria meningitidis ATCC
13091]
Length = 499
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 17/93 (18%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61
LF G + EC ++E+ +K + N G IA T
Sbjct: 41 TYISLFSSAGVGCYGFKT----NGFECVATNELLEKRLKIQKYNQKCRFDSGYIAGDITL 96
Query: 62 ------------QDIPDHDVLLAGFPCQPFSQA 82
+ + DV++A PCQ S A
Sbjct: 97 PETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 129
>gi|254672007|emb|CBA04511.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis
alpha275]
gi|261391820|emb|CAX49276.1| putative modification methylase (cytosine-specific
methyltransferase) [Neisseria meningitidis 8013]
Length = 862
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 17/93 (18%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61
LF G + EC ++E+ +K + N G IA T
Sbjct: 41 TYISLFSSAGVGCYGFKT----NGFECVATNELLEKRLKIQKYNQKCRFDSGYIAGDITL 96
Query: 62 ------------QDIPDHDVLLAGFPCQPFSQA 82
+ + DV++A PCQ S A
Sbjct: 97 PETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 129
>gi|121634167|ref|YP_974412.1| putative DNA methylase [Neisseria meningitidis FAM18]
gi|120865873|emb|CAM09607.1| putative DNA methylase [Neisseria meningitidis FAM18]
gi|325139180|gb|EGC61726.1| Modification methylase HgaIA [Neisseria meningitidis ES14902]
Length = 862
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 17/93 (18%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61
LF G + EC ++E+ +K + N G IA T
Sbjct: 41 TYISLFSSAGVGCYGFKT----NGFECVATNELLEKRLKIQKYNQKCRFDSGYIAGDITL 96
Query: 62 ------------QDIPDHDVLLAGFPCQPFSQA 82
+ + DV++A PCQ S A
Sbjct: 97 PETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 129
>gi|11877311|emb|CAC19024.1| putative adenine/cytosine DNA methyltransferase [Neisseria
meningitidis]
Length = 862
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 17/93 (18%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61
LF G + EC ++E+ +K + N G IA T
Sbjct: 41 TYISLFSSAGVGCYGFKT----NGFECVATNELLEKRLKIQKYNQKCRFDSGYIAGDITL 96
Query: 62 ------------QDIPDHDVLLAGFPCQPFSQA 82
+ + DV++A PCQ S A
Sbjct: 97 PETQAKLFAEIRRWNTEIDVVIATPPCQGMSVA 129
>gi|156064739|ref|XP_001598291.1| hypothetical protein SS1G_00377 [Sclerotinia sclerotiorum 1980]
gi|154691239|gb|EDN90977.1| hypothetical protein SS1G_00377 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 789
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
D +CG GG+ + ++ + ++NP++ + + +
Sbjct: 473 YTYGDGYCGAGGMTVGAAAA----GLKVKWGFDLNPHAGLTWQNNFPLAEFHLLPVNEFA 528
Query: 61 TQDIPDH----DVLLAGFPCQPFSQA 82
P D+L PCQ FS A
Sbjct: 529 ALPDPRKNLWVDILHLSPPCQVFSPA 554
>gi|116062014|dbj|BAF34635.1| DNA methyltransferase 1a [Brassica rapa]
Length = 1528
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 28/110 (25%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKIK 60
D+F G GG+ LEQ ++ E + K + I +
Sbjct: 1091 LDIFAGCGGLSQGLEQAGVSA---TKWAIEYEEPAGKAFRKNHPETTVFVDNCNVILRAI 1147
Query: 61 TQDIPDHD------------------------------VLLAGFPCQPFS 80
+ D D + G PCQ FS
Sbjct: 1148 MEKCGDQDECISTKEANELAEKLDEDQKRTLPLPGQVDFINGGPPCQGFS 1197
>gi|13476615|ref|NP_108185.1| DNA modification methylase [Mesorhizobium loti MAFF303099]
gi|14027377|dbj|BAB53646.1| mlr7992 [Mesorhizobium loti MAFF303099]
Length = 390
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 25/88 (28%), Gaps = 8/88 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS------VKTYQANFPNTLIFGD 55
+ I L G G+ L +E E ++ P +
Sbjct: 8 IDILSLCTGGAGLDLGVELAIPSA--RTVCMVEREAFAVAHLVSAMEQGLLHPAPIWSDA 65
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D L+ G PCQP S AG
Sbjct: 66 RTFDGRAWRGCVDGLVGGIPCQPHSLAG 93
>gi|320037073|gb|EFW19011.1| hypothetical protein CPSG_04557 [Coccidioides posadasii str.
Silveira]
Length = 607
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
D FCG GG+ Q H + + P ++ TY+ ++
Sbjct: 271 YTFGDGFCGAGGVSRGALQAGLH----VRWGFDKCPKAMDTYRLNFRTAVGETCEVVHFL 326
Query: 61 TQDIP--DHDVLLAGFPCQPFSQA 82
T + D++ PCQ FS A
Sbjct: 327 TNETKDIMVDIMHFSPPCQTFSPA 350
>gi|150402932|ref|YP_001330226.1| DNA-cytosine methyltransferase [Methanococcus maripaludis C7]
gi|150033962|gb|ABR66075.1| DNA-cytosine methyltransferase [Methanococcus maripaludis C7]
Length = 367
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 37/132 (28%), Gaps = 55/132 (41%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLFCG GG + + E++ + +Y N+ T+ + +I
Sbjct: 12 MNFIDLFCGCGGFSRGF----VEMGFKPLLAIELDENAANSYALNYNGTVFEKKLNEILE 67
Query: 62 QDIPDH---------------------------------------------------DVL 70
+++ D++
Sbjct: 68 KEVYFKLEDFLVQDDIEEFKKLNNYENLNPVVINEDIREINSKYISNIVNNNSDSKIDLI 127
Query: 71 LAGFPCQPFSQA 82
+ G PC+ ++ A
Sbjct: 128 IGGPPCEGYTGA 139
>gi|225465257|ref|XP_002268238.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 1208
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 32/110 (29%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59
D+F G GG+ L+Q ++ E + + + N P+ L+F + +
Sbjct: 776 LDVFAGCGGLSEGLQQAGVSL---TKWAIEYEEPAGEAFHLNHPDALMFINDCNVILRAI 832
Query: 60 -----------------------------KTQDIPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 833 MSACGDADDCVSTSEATELAEKLDEKDIRNLPRPGQVDFINGGPPCQGFS 882
>gi|15676623|ref|NP_273767.1| modification methylase HgaI-1 [Neisseria meningitidis MC58]
gi|5578896|emb|CAB51245.1| m5C-methyltransferase [Neisseria meningitidis]
gi|7225952|gb|AAF41138.1| modification methylase HgaI-1 [Neisseria meningitidis MC58]
gi|308388915|gb|ADO31235.1| modification methylase HgaI-1 [Neisseria meningitidis alpha710]
gi|316983707|gb|EFV62688.1| modification methylase HgaIA [Neisseria meningitidis H44/76]
gi|325133760|gb|EGC56416.1| DNA-cytosine methyltransferase [Neisseria meningitidis M13399]
gi|325140119|gb|EGC62648.1| DNA-cytosine methyltransferase [Neisseria meningitidis CU385]
gi|325144071|gb|EGC66379.1| DNA-cytosine methyltransferase [Neisseria meningitidis
M01-240013]
gi|325200590|gb|ADY96045.1| DNA-cytosine methyltransferase [Neisseria meningitidis H44/76]
gi|325206432|gb|ADZ01885.1| DNA-cytosine methyltransferase [Neisseria meningitidis
M04-240196]
gi|325207770|gb|ADZ03222.1| DNA-cytosine methyltransferase [Neisseria meningitidis NZ-05/33]
Length = 352
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 11/90 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDI--- 56
M+ LF G E ++ ++ ++E+ P + + +I GDI
Sbjct: 1 MMIGASLFSSAG----IAETYLHNAGIKIIAANELVPERANLYKALYPESKMIIGDILHE 56
Query: 57 ---AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D L+A PCQ S AG
Sbjct: 57 EVFQNLIQSVPNRLDFLIASPPCQGMSVAG 86
>gi|53729085|ref|ZP_00134186.2| COG0270: Site-specific DNA methylase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307257255|ref|ZP_07539025.1| Modification methylase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306864105|gb|EFM96018.1| Modification methylase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
Length = 354
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 14/90 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
LK D FCG GG+ L++ + + +TY+ N
Sbjct: 9 LKAVDFFCGGGGMSYGLQKA----GIRILAGIDYEINCKETYETNIKGASFIHANVFELT 64
Query: 57 -----AKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ D+ +L+ PCQ +S
Sbjct: 65 EKELEKTLDISRKDDNLILVGCSPCQYWSV 94
>gi|283379280|dbj|BAI66066.1| DNA metyltransferase [Oryza sativa Japonica Group]
Length = 189
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 16/94 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
+ + LF GIGG + L + ++ EI+ ++ ++ + T I
Sbjct: 74 MNVLSLFSGIGGAEVALHRLGIC--MKTVVLVEISEVNMTLLRSWWDQTQTGTLIEIADV 131
Query: 59 ---------IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + D+++ G PC AG
Sbjct: 132 QNLTAERIELFIRRFGGFDLVIGGSPCNN--LAG 163
>gi|120602087|ref|YP_966487.1| C-5 cytosine-specific DNA methylase [Desulfovibrio vulgaris DP4]
gi|120562316|gb|ABM28060.1| C-5 cytosine-specific DNA methylase [Desulfovibrio vulgaris DP4]
Length = 659
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 8/83 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKI 59
+ DLF G GG L +E + +P + + + T ++
Sbjct: 14 VVDLFAGGGGASLGIEMA----GCRVHAAVNHDPVAVSLHRENHPDTEHYTQDVFTVSPQ 69
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+L A C S+A
Sbjct: 70 WVTRGRKVGLLWASPDCTHHSKA 92
>gi|258570503|ref|XP_002544055.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904325|gb|EEP78726.1| predicted protein [Uncinocarpus reesii 1704]
Length = 571
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-ANFPNTLIFGDIAKIK 60
D FCG GG+ Q + + + ++ TY+ ++A
Sbjct: 273 YTFGDGFCGAGGVSRGALQAGLY----VRWGFDKCHKAMDTYRLNFRTAVGETCEVAHFL 328
Query: 61 TQDIP--DHDVLLAGFPCQPFSQA 82
T D D+L PCQ FS A
Sbjct: 329 TNDAKDIMVDILHFSPPCQTFSSA 352
>gi|302520399|ref|ZP_07272741.1| DNA cytocine methyl transferase [Streptomyces sp. SPB78]
gi|302429294|gb|EFL01110.1| DNA cytocine methyl transferase [Streptomyces sp. SPB78]
Length = 434
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 30/98 (30%), Gaps = 20/98 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLF G GG+ H + E ++++ T + +K
Sbjct: 38 YTVVDLFSGGGGMSYGFH---AHPSFEMRGAADVEVGKPSTGHGAIGCNATYEANIGVKP 94
Query: 62 Q-----------------DIPDHDVLLAGFPCQPFSQA 82
DVLLA PC FS+A
Sbjct: 95 MAVDLAAIEADELAAQVAPPGGVDVLLACPPCTGFSRA 132
>gi|109638623|ref|YP_656628.1| DNA (cytosine-5-)-methyltransferase [Ranid herpesvirus 2]
gi|109138110|gb|ABG25588.1| ORF120 [Ranid herpesvirus 2]
Length = 861
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 16/89 (17%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D FCG GG+ L LEQ+ + + + + ++ T+ N ++ D
Sbjct: 428 FDAFCGAGGLSLGLEQSGL---CDVKWGIDTDAAALATFSKNHNFSVCAYHEPLENMLDK 484
Query: 65 PDHD-------------VLLAGFPCQPFS 80
D L+ G PCQ FS
Sbjct: 485 VVADPEQSYYPRPGQVECLVGGPPCQGFS 513
>gi|216711|dbj|BAA14377.1| HgaI methylase [Avibacterium paragallinarum]
gi|435623|dbj|BAA04206.1| HgaI methylase 1 [Avibacterium paragallinarum]
gi|1090538|prf||2019268A HgaI restriction methylase:ISOTYPE=1
Length = 365
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 16/89 (17%)
Query: 5 TDLFC--GIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIKT 61
LF GIG E + ++ ++E I + + + ++ GDI +
Sbjct: 16 LSLFSSAGIG------EYFLSRVGIDIIVANELIKKRADLYQKIYPNHKMVIGDIRDQRI 69
Query: 62 QDI-------PDHDVLLAGFPCQPFSQAG 83
+ D L+A PCQ S AG
Sbjct: 70 FNKVLNIALTNQVDFLIASPPCQGMSVAG 98
>gi|462652|sp|P25282|MTG1_HAEGA RecName: Full=Modification methylase HgaIA; Short=M.HgaIA;
AltName: Full=Cytosine-specific methyltransferase
HgaIA; AltName: Full=M.HgaI-1
Length = 357
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 16/89 (17%)
Query: 5 TDLFC--GIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIKT 61
LF GIG E + ++ ++E I + + + ++ GDI +
Sbjct: 8 LSLFSSAGIG------EYFLSRVGIDIIVANELIKKRADLYQKIYPNHKMVIGDIRDQRI 61
Query: 62 QDI-------PDHDVLLAGFPCQPFSQAG 83
+ D L+A PCQ S AG
Sbjct: 62 FNKVLNIALTNQVDFLIASPPCQGMSVAG 90
>gi|325567983|ref|ZP_08144484.1| type II DNA modification methyltransferase Spn5252IP
[Enterococcus casseliflavus ATCC 12755]
gi|325158457|gb|EGC70607.1| type II DNA modification methyltransferase Spn5252IP
[Enterococcus casseliflavus ATCC 12755]
Length = 176
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Query: 23 NHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI---KTQDIPDHDVLLAGFPCQ 77
C EI+ ++ + + DI K + I +++ GFPCQ
Sbjct: 2 EQAGYRCVGYCEIDGHARKSYQSIPDTKQEVEMYDITKFSDEFIRGIGRVNIIAGGFPCQ 61
Query: 78 PFSQAG 83
FS AG
Sbjct: 62 AFSLAG 67
>gi|112818953|gb|ABI23560.1| DNA methyltransferase 2 [Artemia franciscana]
Length = 379
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
+++ +LF G+GG+ + + N++ S EIN +VKTYQ NF + ++ +I +
Sbjct: 4 IQVLELFAGLGGLHIAVNN-QKDANIQVVKSFEINVNAVKTYQENFGHDVVSNRNILSLS 62
Query: 61 TQDIPDHDV--LLAGFPCQPFSQAG 83
T+++ +V + PCQPF++ G
Sbjct: 63 TEELFRQNVNAIFMSPPCQPFTRLG 87
>gi|115450235|ref|NP_001048718.1| Os03g0110800 [Oryza sativa Japonica Group]
gi|108705795|gb|ABF93590.1| DNA cytosine methyltransferase Zmet3, putative, expressed [Oryza
sativa Japonica Group]
gi|113547189|dbj|BAF10632.1| Os03g0110800 [Oryza sativa Japonica Group]
Length = 597
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 16/94 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + L + H ++ S E + + ++ + T I
Sbjct: 474 MNVLSLFSGIGGAEVALHRLGIH--MKTVISVEKSEVNRTILKSWWDQTQTGTLIEIADV 531
Query: 62 QD------------IPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PC AG
Sbjct: 532 RHLTTERIETFIRRFGGFDLVIGGSPCNN--LAG 563
>gi|108705798|gb|ABF93593.1| DNA cytosine methyltransferase Zmet3, putative, expressed [Oryza
sativa Japonica Group]
Length = 507
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 16/94 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + L + H ++ S E + + ++ + T I
Sbjct: 384 MNVLSLFSGIGGAEVALHRLGIH--MKTVISVEKSEVNRTILKSWWDQTQTGTLIEIADV 441
Query: 62 QD------------IPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PC AG
Sbjct: 442 RHLTTERIETFIRRFGGFDLVIGGSPCNN--LAG 473
>gi|315222621|ref|ZP_07864510.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211]
gi|315188307|gb|EFU22033.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211]
Length = 417
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 31/128 (24%), Gaps = 48/128 (37%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--------- 51
ML I D+F G GG+ E++ + + +
Sbjct: 1 MLNIVDVFSGAGGLTEGFRY---KDYYNFICHIEMDKDACSSLELRNIYYYLKKENNLSP 57
Query: 52 IFGDIAKIKTQD------------------------------------IPDHDVLLAGFP 75
F I ++D D ++ G P
Sbjct: 58 YFEYIQGKISRDDLYSIIPRDLTKDILNKEISKDTIPSIFEFIDQRLGNNKLDGIIGGPP 117
Query: 76 CQPFSQAG 83
CQ +S G
Sbjct: 118 CQAYSTIG 125
>gi|40021636|gb|AAR37052.1| putative cytosine DNA methyltransferase [Neurospora tetrasperma]
Length = 246
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 23/86 (26%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----VKTYQANFPNTLIFGDI 56
D F G GG + H + ++ + I
Sbjct: 89 YTAGDTFAGAGGASRGITDAGVHLEF----CVDNWEHAVASLNANFQGQDTTIYDIDMHN 144
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ + D+L PCQ +S A
Sbjct: 145 FIVDKEIRHRVDILHLSPPCQVWSPA 170
>gi|134046699|ref|YP_001098184.1| DNA-cytosine methyltransferase [Methanococcus maripaludis C5]
gi|132664324|gb|ABO35970.1| DNA-cytosine methyltransferase [Methanococcus maripaludis C5]
Length = 366
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLFCG GG + + E++ + +Y N+ + + +
Sbjct: 12 MNFIDLFCGCGGFSRGF----VEMGFKPLLAIELDENAANSYALNYNGMVFEKKLNEFLE 67
Query: 62 QDIPD 66
++I
Sbjct: 68 KEIYF 72
>gi|288801950|ref|ZP_06407391.1| modification methylase HgiDII (Cytosine-specific
methyltransferase HgiDII) [Prevotella melaninogenica
D18]
gi|288335385|gb|EFC73819.1| modification methylase HgiDII (Cytosine-specific
methyltransferase HgiDII) [Prevotella melaninogenica
D18]
Length = 355
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 14/90 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIK 60
K D CG GG+ L Q + + + + +TY+ N P + I +I ++
Sbjct: 6 YKAIDFLCGGGGMTCGLRQA----GINVIAGVDFDQDAKETYEYNNPGSVFIQKNIKNLR 61
Query: 61 TQDIPDHD---------VLLAGFPCQPFSQ 81
+ +L+ PCQ +S
Sbjct: 62 SNYFERKFEIRKNDDFLILVGCSPCQFYSI 91
>gi|260769649|ref|ZP_05878582.1| site-specific DNA-methyltransferase putative [Vibrio furnissii CIP
102972]
gi|260614987|gb|EEX40173.1| site-specific DNA-methyltransferase putative [Vibrio furnissii CIP
102972]
Length = 383
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 25/101 (24%), Gaps = 25/101 (24%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK--- 60
I F G G + L E++ + F +E Y+ + +
Sbjct: 18 IFSFFAGTGFLDLGFERS----GFDIRFVNEFYKPFYDAYKYSRKKMGHPEPQYEHHLGS 73
Query: 61 ------------------TQDIPDHDVLLAGFPCQPFSQAG 83
+ G PC FS AG
Sbjct: 74 IDELLAGPPKKRLKQFLIDAKKDGLVGFIGGPPCPDFSVAG 114
>gi|281212492|gb|EFA86652.1| DNA cytosine-5--methyltransferase [Polysphondylium pallidum PN500]
Length = 420
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 12/92 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+I + F GIGG+ + E S +IN + Y N + K+ +
Sbjct: 37 LRILEFFSGIGGMYYSTLISGIP--FEVLQSFDINTNANDVYNYNISSKYPNPKKHKVNS 94
Query: 62 Q----------DIPDHDVLLAGFPCQPFSQAG 83
+ + + L PCQPF++ G
Sbjct: 95 KSIDALTTKELESFRANTWLMSPPCQPFTRVG 126
>gi|34451619|gb|AAQ72366.1| TspRI methylase [Thermus sp. R]
Length = 431
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 11/84 (13%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
DLF G GG + EQ +I + KT+ + P A+ T ++
Sbjct: 70 VDLFSGAGGFSVGFEQA----GFVSALGLDIYTVAAKTFMEHHPRAGFILGDARAVTPEM 125
Query: 65 -------PDHDVLLAGFPCQPFSQ 81
V+ G PCQ FS
Sbjct: 126 LLEALNGLRPHVVTGGVPCQRFSL 149
>gi|294664030|ref|ZP_06729438.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292606199|gb|EFF49442.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 349
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKT 61
LF G GG+ + ++ + +++ +T+ NFP I I ++ T
Sbjct: 9 TCISLFSGGGGMDIGIKAA----GFDIKVATDAESLCQETFAKNFPGVPFIVRRIGELST 64
Query: 62 QD--------IPDHDVLLAGFPCQPFSQ 81
+ + D+L+ G PC FS+
Sbjct: 65 SELLDAAGLAPGEVDLLIGGPPCPAFSK 92
>gi|108705796|gb|ABF93591.1| DNA cytosine methyltransferase Zmet3, putative, expressed [Oryza
sativa Japonica Group]
gi|283379278|dbj|BAI66065.1| DNA methyltransferase [Oryza sativa Japonica Group]
Length = 598
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 16/94 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + L + H ++ S E + + ++ + T I
Sbjct: 475 MNVLSLFSGIGGAEVALHRLGIH--MKTVISVEKSEVNRTILKSWWDQTQTGTLIEIADV 532
Query: 62 QD------------IPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PC AG
Sbjct: 533 RHLTTERIETFIRRFGGFDLVIGGSPCNN--LAG 564
>gi|319778257|ref|YP_004129170.1| modification methylase BepI-like protein [Taylorella equigenitalis
MCE9]
gi|317108281|gb|ADU91027.1| modification methylase BepI-like protein [Taylorella equigenitalis
MCE9]
Length = 130
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 10/75 (13%)
Query: 19 EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT----------QDIPDHD 68
+ F+++I P + + F +A I + D
Sbjct: 31 HILLPKTRFKTVFANDIKPDAKIVWDNYFRRDPSIFKVASIVELVKSHNSELKKIPDSID 90
Query: 69 VLLAGFPCQPFSQAG 83
VL GFPCQ FS +G
Sbjct: 91 VLTGGFPCQDFSVSG 105
>gi|89890924|ref|ZP_01202433.1| DNA (cytosine-5-)-methyltransferase, dcm [Flavobacteria bacterium
BBFL7]
gi|89517069|gb|EAS19727.1| DNA (cytosine-5-)-methyltransferase, dcm [Flavobacteria bacterium
BBFL7]
Length = 356
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 14/90 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
+K D FCG GG+ ++ + ++ + TY+AN N
Sbjct: 9 IKAVDFFCGGGGMSYGMQTS----GIQVLAGIDYEENCRSTYEANINNAKFIKADVFELK 64
Query: 56 ----IAKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ D +L+ PCQ +S
Sbjct: 65 EEDLQNTLNLTRNDDELLLIGCSPCQFWSI 94
>gi|302760531|ref|XP_002963688.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii]
gi|300168956|gb|EFJ35559.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii]
Length = 1471
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 36/113 (31%), Gaps = 37/113 (32%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + D+F G GG+ + Q+ ++ E + + + ++ N P +F D +
Sbjct: 1035 LSMLDIFAGCGGLSEGIHQSGIAS---TKWAIEYDHAAAEAFKMNHPTATVFFDNCNVVL 1091
Query: 62 QD----------------------------------IPDHDVLLAGFPCQPFS 80
+ + D + G PCQ FS
Sbjct: 1092 RSIMEIGGDLDDCCSTPEAAEMASKLSENQKSSLPRPGEVDFISGGPPCQGFS 1144
>gi|297621903|ref|YP_003710040.1| C-5 cytosine-specific DNA methylase [Waddlia chondrophila WSU
86-1044]
gi|297377204|gb|ADI39034.1| C-5 cytosine-specific DNA methylase [Waddlia chondrophila WSU
86-1044]
Length = 410
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 33 SEINPYSVKT-YQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+EI+ S T + +I GDI I + D L GFPCQ FS AG
Sbjct: 104 NEIDKSSCMTLRKNRPSWNVIEGDIKSIDFRQFKGIDFLSGGFPCQAFSYAG 155
>gi|156974067|ref|YP_001444974.1| site-specific DNA-methyltransferase [Vibrio harveyi ATCC BAA-1116]
gi|156525661|gb|ABU70747.1| hypothetical protein VIBHAR_01778 [Vibrio harveyi ATCC BAA-1116]
Length = 386
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 29/101 (28%), Gaps = 25/101 (24%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--------LIFGD 55
I F G G + L E + + F +E + + +Y+ + G
Sbjct: 22 IFSFFSGSGFLDLGFEMS----GFDVRFVNEFHEPFLNSYKYSRKQMNLAEPKYGHFLGS 77
Query: 56 IA-------------KIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + G PC FS AG
Sbjct: 78 IEDFVTGERATELSGFVNNAKSESLVGFIGGPPCPDFSVAG 118
>gi|222624058|gb|EEE58190.1| hypothetical protein OsJ_09131 [Oryza sativa Japonica Group]
Length = 918
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 16/94 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + L + H ++ S E + + ++ + T I
Sbjct: 552 MNVLSLFSGIGGAEVALHRLGIH--MKTVISVEKSEVNRTILKSWWDQTQTGTLIEIADV 609
Query: 62 QD------------IPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PC AG
Sbjct: 610 RHLTTERIETFIRRFGGFDLVIGGSPCNN--LAG 641
>gi|149432729|ref|XP_001519246.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase 3 beta
[Ornithorhynchus anatinus]
Length = 640
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L+ V+ + +SEI S+ ++ N +I
Sbjct: 408 IRVLSLFDGIATGYLVLKDLG--IKVDKYVASEICEDSIALGTVRHEGNIEYVHDVRNIT 465
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K + D+++ G PC S
Sbjct: 466 KRHIDEWGPFDLVIGGSPCNDLSN 489
>gi|221119972|ref|XP_002165825.1| PREDICTED: similar to predicted protein, partial [Hydra
magnipapillata]
Length = 919
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
L++ LF G+ L L + + + +SEI+P ++K + I
Sbjct: 624 LRVLSLFDGLSTGYLALSELGLD--ILSYHASEIDPLAIKVSKVHHSMRVEQIGDVQKIT 681
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82
K ++ D+++ G PC S A
Sbjct: 682 KQDIENWGPFDLVIGGSPCDELSIA 706
>gi|212639806|ref|YP_002316326.1| Site-specific DNA methylase [Anoxybacillus flavithermus WK1]
gi|212561286|gb|ACJ34341.1| Site-specific DNA methylase [Anoxybacillus flavithermus WK1]
Length = 469
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 39/119 (32%), Gaps = 40/119 (33%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN------------------------ 36
M DLF G GG+ + ++ + E++
Sbjct: 24 MFTSIDLFAGPGGLATGFMWS----GIKPLIAVEMSYWTVQTYSASHNAEIFDLESFLSG 79
Query: 37 --PYSVKTYQANFPNTLIFGDIAKIKT----------QDIPDHDVLLAGFPCQPFSQAG 83
+ ++ + +I+GDI K+ + D++ G PC+ FS AG
Sbjct: 80 EMKDPDQFFRKSDRTLIIYGDINKVSNELISKILKQRFGVDSVDIVTGGAPCESFSMAG 138
>gi|254416032|ref|ZP_05029788.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
gi|196177207|gb|EDX72215.1| C-5 cytosine-specific DNA methylase superfamily [Microcoleus
chthonoplastes PCC 7420]
Length = 398
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
Query: 24 HRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKIKTQDI-PDHDVLLAGFPCQP 78
S +I P S GD+ ++ ++ D++ G PCQP
Sbjct: 83 RAGFTHVASYDILPESGITLRNVRPEWTVFGGEQGDVTQVDWREYRGLVDIIHGGPPCQP 142
Query: 79 FSQAG 83
FS AG
Sbjct: 143 FSVAG 147
>gi|126208670|ref|YP_001053895.1| modification methylase [Actinobacillus pleuropneumoniae L20]
gi|126097462|gb|ABN74290.1| modification methylase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
Length = 364
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 14/90 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
LK D FCG GG+ L++ + + +TY+ N
Sbjct: 19 LKAVDFFCGGGGMSYGLQKA----GIRILAGIDYEINCKETYETNIKGASFIHANVFELT 74
Query: 57 -----AKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ D+ +L+ PCQ +S
Sbjct: 75 EKELEKTLDISRKDDNLILVGCSPCQYWSV 104
>gi|190337628|gb|AAI63546.1| Dnmt7 protein [Danio rerio]
Length = 1456
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
+++ LF GI L L+ E + +SEI S + ++ I
Sbjct: 1178 IRVLSLFDGIATGYLVLKDLGFKL--ERYIASEICEDSIAVGMVKHEGKIEYVKDVRTIT 1235
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ + D+L+ G PC S
Sbjct: 1236 RKHLAEWGPFDLLIGGSPCNDLSM 1259
>gi|108705797|gb|ABF93592.1| DNA cytosine methyltransferase Zmet3, putative, expressed [Oryza
sativa Japonica Group]
Length = 626
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 16/94 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + L + H ++ S E + + ++ + T I
Sbjct: 503 MNVLSLFSGIGGAEVALHRLGIH--MKTVISVEKSEVNRTILKSWWDQTQTGTLIEIADV 560
Query: 62 QD------------IPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PC AG
Sbjct: 561 RHLTTERIETFIRRFGGFDLVIGGSPCNN--LAG 592
>gi|240142602|ref|YP_002967115.1| putative DNA methyltransferase [Methylobacterium extorquens AM1]
gi|240012549|gb|ACS43774.1| putative DNA methyltransferase [Methylobacterium extorquens AM1]
Length = 260
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 24/101 (23%), Gaps = 25/101 (24%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSE----------------------INPYSVK 41
+ DLF G GG+ + + I+P+
Sbjct: 12 VVDLFSGGGGMSCGF---ARTPGFRLVGAVDLERGKPSAGATGCNGTYKANIGIDPHRAD 68
Query: 42 TYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ VL A PC FS+A
Sbjct: 69 LATLTPDDLREAVLRTAGVDLAPGRLGVLAACPPCTDFSRA 109
>gi|170719866|ref|YP_001747554.1| C-5 cytosine-specific DNA methylase [Pseudomonas putida W619]
gi|169757869|gb|ACA71185.1| C-5 cytosine-specific DNA methylase [Pseudomonas putida W619]
Length = 350
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 27/83 (32%), Gaps = 10/83 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK---- 60
DLFCG GG+ L + +I+ Y+ N + + K
Sbjct: 7 VDLFCGAGGLTAGL----LKTGISVRAGYDIDRNCEYAYKTNNGAEFVAESVESAKVRDV 62
Query: 61 --TQDIPDHDVLLAGFPCQPFSQ 81
+L PCQPFS
Sbjct: 63 AAWYRDGRVKLLAGCAPCQPFST 85
>gi|228931114|ref|ZP_04094051.1| Phage-related DNA methylase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228828566|gb|EEM74265.1| Phage-related DNA methylase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 221
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 23 NHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
+ +C E + ++ K+Y++ DI I IP DV GFPC S
Sbjct: 2 EEASHKCIGYVEWDKFARKSYESIHNTRGEWTEHDINNIIPGAIPKADVWTFGFPCTDIS 61
Query: 81 QA 82
A
Sbjct: 62 IA 63
>gi|168010951|ref|XP_001758167.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690623|gb|EDQ76989.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1579
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 32/110 (29%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63
D+F G GG+ L Q ++ E + + + N P T +F + + +
Sbjct: 1131 LDIFAGCGGLSEGLRQAGVAT---TKWAIEYEHPASEAFNLNHPETNVFCENCNVILRCI 1187
Query: 64 ---------------------------------IPDHDVLLAGFPCQPFS 80
+ D + G PCQ FS
Sbjct: 1188 MERGGDSDECLSTPDAQEMASALSDEKKKLLPAQGEVDFINGGPPCQGFS 1237
>gi|302786012|ref|XP_002974777.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii]
gi|300157672|gb|EFJ24297.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii]
Length = 1335
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 36/113 (31%), Gaps = 37/113 (32%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + D+F G GG+ + Q+ ++ E + + + ++ N P +F D +
Sbjct: 899 LSMLDIFAGCGGLSEGIHQSGIAS---TKWAIEYDHAAAEAFKMNHPTATVFFDNCNVVL 955
Query: 62 QD----------------------------------IPDHDVLLAGFPCQPFS 80
+ + D + G PCQ FS
Sbjct: 956 RSIMEIGGDLDDCCSTPEAAEMASKLSENQKSSLPRPGEVDFISGGPPCQGFS 1008
>gi|225452416|ref|XP_002273972.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 603
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + L + + + EI+ + ++ + T G + I
Sbjct: 478 ITLLSLFSGIGGAEIALHRLGIPL--KNVVAVEISETNRNILRSWWEQTNQRGTLVDIAD 535
Query: 62 -------------QDIPDHDVLLAGFPCQPFSQAG 83
D+++ G PC AG
Sbjct: 536 VQQLNGDRLEQLIHTFGGFDLIVGGSPCNN--LAG 568
>gi|12229868|sp|Q9RLM4|MTD1_NEIMC RecName: Full=Probable modification methylase NmeDIP;
Short=M.NmeDIP; AltName: Full=Cytosine-specific
methyltransferase NmeDIP
gi|6179652|emb|CAB59897.1| putative m5C methylase [Neisseria meningitidis]
Length = 420
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 30/102 (29%), Gaps = 26/102 (25%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK--- 60
I F G G + L E + + F +E++P ++ Y+ + I
Sbjct: 58 IFSFFSGAGFLDLGFELS----GFDIAFVNEVHPPFLEAYKYSRSRMDIPKPKYGYFKGS 113
Query: 61 -------------------TQDIPDHDVLLAGFPCQPFSQAG 83
+ + G PC FS AG
Sbjct: 114 IDECLYAEKAKDLAGWVKKEKQNGIIVGFIGGPPCPDFSIAG 155
>gi|116203489|ref|XP_001227555.1| hypothetical protein CHGG_09628 [Chaetomium globosum CBS 148.51]
gi|88175756|gb|EAQ83224.1| hypothetical protein CHGG_09628 [Chaetomium globosum CBS 148.51]
Length = 2354
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 17/94 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L+ DLFCG G LE+ VE ++++I ++ TY AN P++ + +
Sbjct: 1662 LRGMDLFCGSGNFGRGLEEGGA---VEVKWANDIWDRAIHTYMANSPDSTAKPFLGSVGD 1718
Query: 60 ------------KTQDIPDHDVLLAGFPCQPFSQ 81
D D + AG PC FS
Sbjct: 1719 LLQLALEGKYADNVPRPGDVDFISAGSPCPGFSL 1752
>gi|66472506|ref|NP_001018312.1| DNA methyltransferase [Danio rerio]
gi|62433267|dbj|BAD95481.1| DNA methyltransferase [Danio rerio]
Length = 1433
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
+++ LF GI L L+ E + +SEI S + ++ I
Sbjct: 1155 IRVLSLFDGIATGYLVLKDLGFKL--ERYIASEICEDSIAVGMVKHEGKIEYVKDVRTIT 1212
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ + D+L+ G PC S
Sbjct: 1213 RKHLAEWGPFDLLIGGSPCNDLSM 1236
>gi|242052551|ref|XP_002455421.1| hypothetical protein SORBIDRAFT_03g010500 [Sorghum bicolor]
gi|241927396|gb|EES00541.1| hypothetical protein SORBIDRAFT_03g010500 [Sorghum bicolor]
Length = 608
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 14/87 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+ + LF GIGG + L + ++ S E + + ++ + T I
Sbjct: 485 MNVLSLFSGIGGAEVALHRLGIR--MKTVISVEKSEVNRTILKSWWDQTQTGLLIEICDV 542
Query: 60 ----------KTQDIPDHDVLLAGFPC 76
+ I D+++ G PC
Sbjct: 543 QTLTSERIEAYVRRIGGFDLVIGGSPC 569
>gi|2906004|gb|AAC03766.1| C5-DNA-methyltransferase [Ascobolus immersus]
Length = 1356
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 37/105 (35%), Gaps = 29/105 (27%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
LK D+F G GG+ L L+ + V+ + E P + T NFP+ +F A +
Sbjct: 784 LKGLDIFAGCGGLTLGLDLSGA---VDTKWDIEFAPSAANTLALNFPDAQVFNQCANVLL 840
Query: 60 ------------------------KTQDIPDHDVLLAGFPCQPFS 80
+ D + G PCQ FS
Sbjct: 841 SRAIQSEDEGSLDIEYDLQGRVLPDLPKKGEVDFIYGGPPCQGFS 885
>gi|169153891|emb|CAQ14785.1| DNA (cytosine-5-)-methyltransferase 7 [Danio rerio]
gi|169158982|emb|CAQ13240.1| DNA (cytosine-5-)-methyltransferase 7 [Danio rerio]
Length = 1433
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
+++ LF GI L L+ E + +SEI S + ++ I
Sbjct: 1155 IRVLSLFDGIATGYLVLKDLGFKL--ERYIASEICEDSIAVGMVKHEGKIEYVKDVRTIT 1212
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ + D+L+ G PC S
Sbjct: 1213 RKHLAEWGPFDLLIGGSPCNDLSM 1236
>gi|51245886|ref|YP_065770.1| modification methylase [Desulfotalea psychrophila LSv54]
gi|50876923|emb|CAG36763.1| probable modification methylase [Desulfotalea psychrophila LSv54]
Length = 360
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 17/99 (17%)
Query: 2 LKI--TDLFCGIGGIRLDLEQTF------NHRNVECF--FSSEINPYSVKTYQANFPNTL 51
+K +LFCG GGI L + N+ + ++++ + + +TY N N+
Sbjct: 1 MKFELAELFCGPGGIALGAQLAGVVYNNRNNESFSIAPSWATDYDEATCRTYALNIHNSN 60
Query: 52 I-------FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ ++ + + L GFPC FS G
Sbjct: 61 ELDLDTVVCQDVRELDIEALRPRQALAFGFPCNDFSSVG 99
>gi|311977244|gb|ADQ20500.1| M1.BfuAI [Lysinibacillus fusiformis]
Length = 357
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 11/89 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIA--- 57
L DLF L Q + FS EI+ + + + DI
Sbjct: 3 LNAVDLFS----GAGGLLQGLLQTDYNVLFSVEIDKAAVRTHLENFPDIPVFDDDIRNLT 58
Query: 58 ---KIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ + D+++ G PCQ FS G
Sbjct: 59 KEKMVELTKNSEIDLVVGGPPCQGFSVFG 87
>gi|301626439|ref|XP_002942400.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Xenopus
(Silurana) tropicalis]
Length = 937
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ H +E + +SE+ S+ +++ +I
Sbjct: 659 IRVLSLFDGIATGLLVLKDLGIH--IERYIASEVCEDSITVGMVRHQGKIMYVGDVRNIT 716
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 717 RKHIQEWGPFDLVIGGSPCNDLSI 740
>gi|255568838|ref|XP_002525390.1| conserved hypothetical protein [Ricinus communis]
gi|223535353|gb|EEF37028.1| conserved hypothetical protein [Ricinus communis]
Length = 479
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 15/94 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+ + LF GIGG + L + S EI+ + ++ + T G + +I
Sbjct: 340 ITVLSLFSGIGGAEVALHRLGIPL--NSVVSVEISEVNRNIPRSWWEQTNQKGYLIEIGD 397
Query: 60 -----------KTQDIPDHDVLLAGFPCQPFSQA 82
+ D+++ G PC + A
Sbjct: 398 VREVDGDSIKRWIKLFGGFDLVIGGSPCNNLAGA 431
>gi|332995746|gb|AEF05801.1| DNA-cytosine methyltransferase [Alteromonas sp. SN2]
Length = 369
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 18 LEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIKTQD-IPDHDVLLAGFP 75
+ + +C F+++ + + T++ DI ++ D D++ A FP
Sbjct: 1 MARAGLDSGWKCLFANDFDYKKVNTYKKNWGNETIVQSDIKTLQCSDLKGAADLVWASFP 60
Query: 76 CQPFS 80
CQ S
Sbjct: 61 CQDLS 65
>gi|149204151|ref|ZP_01881119.1| C-5 cytosine-specific DNA methylase [Roseovarius sp. TM1035]
gi|149142593|gb|EDM30638.1| C-5 cytosine-specific DNA methylase [Roseovarius sp. TM1035]
Length = 366
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI--PDHDVLLAGFP 75
+ + N C +++I+ + Y+ N+ T +F + D D+ A P
Sbjct: 1 MVRAALQENWHCVLANDIDEMKCRVYRENWSGTGLFEGDVASLDPEFLKQDIDLYWASSP 60
Query: 76 CQPFSQAG 83
CQ FS AG
Sbjct: 61 CQDFSLAG 68
>gi|218185097|gb|EEC67524.1| hypothetical protein OsI_34820 [Oryza sativa Indica Group]
gi|222615374|gb|EEE51506.1| hypothetical protein OsJ_32669 [Oryza sativa Japonica Group]
Length = 477
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 32/87 (36%), Gaps = 14/87 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
+ + LF GIGG + L + ++ EI+ ++ ++ + T I
Sbjct: 354 MNVLSLFSGIGGAEVALHRLGIC--MKTVVLVEISEVNMTLLRSWWDQTQTGTLIEIADV 411
Query: 59 ---------IKTQDIPDHDVLLAGFPC 76
+ + D+++ G PC
Sbjct: 412 QNLTAERIELFIRRFGGFDLVIGGSPC 438
>gi|242042531|ref|XP_002468660.1| hypothetical protein SORBIDRAFT_01g049860 [Sorghum bicolor]
gi|241922514|gb|EER95658.1| hypothetical protein SORBIDRAFT_01g049860 [Sorghum bicolor]
Length = 740
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 16/94 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+ + LF GIGG + L + ++ S E + + ++ + T I
Sbjct: 618 MNVLSLFSGIGGAEVALHRLGIR--MKTVISVEKSEVNRTILRSWWDQTQTGTLIEINDV 675
Query: 60 ----------KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PC AG
Sbjct: 676 QTLTSERIEAYIRRFGGFDLVIGGSPCNN--LAG 707
>gi|77412067|ref|ZP_00788393.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae
CJB111]
gi|77161872|gb|EAO72857.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae
CJB111]
Length = 394
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 27 VECFFSSEINPYSVKTY--QANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ C E + ++ K+Y + DI I +P D+ AG PCQ S AG
Sbjct: 1 MTCLGYCEKDKFARKSYEAMYDTEGEWFHDDITSIDPTRLPKADLWTAGSPCQNVSIAG 59
>gi|254671508|emb|CBA09095.1| site-specific DNA-methyltransferase [Neisseria meningitidis
alpha153]
Length = 258
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 11/75 (14%)
Query: 16 LDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-------IFGDIAKIKTQDIPDHD 68
+ EQ + S E+ +TY+ NFP+ + I + D
Sbjct: 1 MGFEQA----GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLTEQDLINCLNGQAVD 56
Query: 69 VLLAGFPCQPFSQAG 83
+++ G PCQ FS AG
Sbjct: 57 LIIGGPPCQGFSMAG 71
>gi|217976734|ref|YP_002360881.1| DNA-cytosine methyltransferase [Methylocella silvestris BL2]
gi|217502110|gb|ACK49519.1| DNA-cytosine methyltransferase [Methylocella silvestris BL2]
Length = 383
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 8/83 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-YSVKTYQANFPNTLIFGDIAKI 59
M + F G GG+ + N C F+++ + L D+ +
Sbjct: 1 MPDFLEFFAG-GGMA----RAGLGPNWTCRFANDFDARKCASYRANWGAGELFEADVGAL 55
Query: 60 KTQDI--PDHDVLLAGFPCQPFS 80
+ DI P ++ A FPCQ S
Sbjct: 56 QPADIKTPRANLAWASFPCQDLS 78
>gi|163848465|ref|YP_001636509.1| C-5 cytosine-specific DNA methylase [Chloroflexus aurantiacus
J-10-fl]
gi|222526394|ref|YP_002570865.1| C-5 cytosine-specific DNA methylase [Chloroflexus sp. Y-400-fl]
gi|163669754|gb|ABY36120.1| C-5 cytosine-specific DNA methylase [Chloroflexus aurantiacus
J-10-fl]
gi|222450273|gb|ACM54539.1| C-5 cytosine-specific DNA methylase [Chloroflexus sp. Y-400-fl]
Length = 322
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 26/92 (28%), Gaps = 18/92 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
++ DLFCGIGG ++ + +++
Sbjct: 4 IRAIDLFCGIGGNSCGARAAGIDI------AAGFDKWALAGQVFQDNFPEARFYNVDLAI 57
Query: 56 -----IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
I I D++LA C S A
Sbjct: 58 LSRRQIHHFHET-IGHVDLILASPECTSHSVA 88
>gi|294084868|ref|YP_003551628.1| DNA-cytosine methyltransferase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664443|gb|ADE39544.1| DNA-cytosine methyltransferase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 538
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 40/132 (30%), Gaps = 53/132 (40%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK------------------T 42
ML + D+F G GG+ Q + S E++P + K
Sbjct: 1 MLPVIDIFAGPGGLGEGFAQA----GFDVRLSVEMDPIAYKTLTLRKFFNQFTPDKVPSK 56
Query: 43 YQANFPNTLIFGDIAKIKTQDI------------------------------PDHD-VLL 71
Y + + ++ ++ + P D +L+
Sbjct: 57 YYSFVRGEIDQSELEQLYPIEWEKAVSAVANIELGTEKGNSELYERLDKLVSPSEDFILI 116
Query: 72 AGFPCQPFSQAG 83
G PCQ +S AG
Sbjct: 117 GGPPCQAYSLAG 128
>gi|291320302|ref|YP_003515564.1| cytosine specific methyltransferase [Mycoplasma agalactiae]
gi|290752635|emb|CBH40608.1| Cytosine specific methyltransferase [Mycoplasma agalactiae]
Length = 339
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 29/91 (31%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
K +LF L E + + +T + DI KI
Sbjct: 3 FKSIELF----AGAGGLALGLEKAGFNHIGLVEFDKDACQTLRNNRSSWNVYEEDIRKIA 58
Query: 61 TQD--------IPDHDVLLAGFPCQPFSQAG 83
+D + D+L G PCQ FS AG
Sbjct: 59 LRDLEKEFKIKKYELDLLSGGAPCQSFSYAG 89
>gi|298377907|ref|ZP_06987856.1| DNA (cytosine-5-)-methyltransferase [Bacteroides sp. 3_1_19]
gi|298265151|gb|EFI06815.1| DNA (cytosine-5-)-methyltransferase [Bacteroides sp. 3_1_19]
Length = 409
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 28/119 (23%), Gaps = 37/119 (31%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF-F---------------SSEINPYSVKTYQA 45
DLF G GG+ + + + +E + K
Sbjct: 6 YTFIDLFAGCGGLSEGFMSSGYFSGLAHVEWELPMVQTLRNRLVQKWNETEEDAKKKVIL 65
Query: 46 NFPN--------TLIFGDIAKIKTQDI-------------PDHDVLLAGFPCQPFSQAG 83
IA+ + D ++ G PCQ +S G
Sbjct: 66 FDIQKTDELISGNWSEESIAQYGENNDNSIQKGLKEIINKESVDFIIGGPPCQAYSIHG 124
>gi|159905323|ref|YP_001548985.1| DNA-cytosine methyltransferase [Methanococcus maripaludis C6]
gi|159886816|gb|ABX01753.1| DNA-cytosine methyltransferase [Methanococcus maripaludis C6]
Length = 355
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DLFCG GG + + E++ + +Y N+ T+ + +
Sbjct: 1 MNFIDLFCGCGGFSRGF----VEMGFKPLLAIELDENAANSYALNYNGTVFEKKLNEFLE 56
Query: 62 QD 63
++
Sbjct: 57 KE 58
>gi|296393591|ref|YP_003658475.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985]
gi|296180738|gb|ADG97644.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985]
Length = 372
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Query: 23 NHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIKTQD---IPDHDVLLAGFPCQP 78
+ E + + T +I GD+ + + + D++ G PCQP
Sbjct: 22 ERAGFQAAALVEFDKNACATLRANFPDTPVIEGDVRGVDWSEIAAPGETDLVAGGPPCQP 81
Query: 79 FSQAG 83
FS AG
Sbjct: 82 FSLAG 86
>gi|158321055|ref|YP_001513562.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs]
gi|158141254|gb|ABW19566.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs]
Length = 448
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 4/50 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL 51
+ + DLF G GG+ + E E + ++ +T +
Sbjct: 1 MVVIDLFSGAGGLTEGFM----RQGFEIVAHVEKDKWACETLKTRIIYHF 46
>gi|319957554|ref|YP_004168817.1| c-5 cytosine-specific DNA methylase [Nitratifractor salsuginis
DSM 16511]
gi|319419958|gb|ADV47068.1| C-5 cytosine-specific DNA methylase [Nitratifractor salsuginis
DSM 16511]
Length = 338
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 6/63 (9%)
Query: 27 VECFFSSEINPYSVKTYQANFPN-----TLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFS 80
+ EI Y+ + I+ D+ + DV+ GFPCQ S
Sbjct: 22 WHTVCAVEIEEYAREVLLQRQRTGDLESFPIWDDVRSFDGKPWKGVVDVITGGFPCQDIS 81
Query: 81 QAG 83
AG
Sbjct: 82 IAG 84
>gi|297792161|ref|XP_002863965.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp.
lyrata]
gi|297309800|gb|EFH40224.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp.
lyrata]
Length = 1532
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63
D+F G GG+ L++ + ++ E + + ++ N P + +F D + +
Sbjct: 1094 LDIFAGCGGLSQGLKKAGVS---DTKWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAI 1150
Query: 64 ---------------------------------IPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 1151 MEKGGDQDDCVSTTEANELAAKLAEDQKSTLPLPGQVDFINGGPPCQGFS 1200
>gi|67925212|ref|ZP_00518579.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67852948|gb|EAM48340.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 417
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Query: 24 HRNVECFFSSEINPYSVKTYQANFPNTLIFGDI-----AKIKTQDIPDHDVLLAGFPCQP 78
H + + S EI + T N P +F K + DV+ G PCQP
Sbjct: 98 HAGFQHYQSYEIIRDAAVTIMQNRPQWNVFYGDDGNVKNKNWSFLKNQIDVIHGGPPCQP 157
Query: 79 FSQAG 83
FS AG
Sbjct: 158 FSIAG 162
>gi|226293221|gb|EEH48641.1| C-5 cytosine methyltransferase DmtA [Paracoccidioides brasiliensis
Pb18]
Length = 654
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 24/83 (28%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
D FCG GG+ Q + + ++ S +
Sbjct: 327 YTFGDGFCGAGGVSRGALQAGLRLNWGFDHSVAA---MNSYRLNFETAIGYTSDVADFLA 383
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
D D+L PCQ FS A
Sbjct: 384 NNTDEIIIDILHFSPPCQTFSPA 406
>gi|225683838|gb|EEH22122.1| c5 cytosine methyltransferase DmtA [Paracoccidioides brasiliensis
Pb03]
Length = 571
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 24/83 (28%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
D FCG GG+ Q + + ++ S +
Sbjct: 300 YTFGDGFCGAGGVSRGALQAGLQLNWGFDHSVAA---MNSYRLNFETAIGYTSDVADFLA 356
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
D D+L PCQ FS A
Sbjct: 357 NNTDEIIIDILHFSPPCQTFSPA 379
>gi|94263940|ref|ZP_01287743.1| DNA (cytosine-5-)-methyltransferase [delta proteobacterium
MLMS-1]
gi|93455685|gb|EAT05864.1| DNA (cytosine-5-)-methyltransferase [delta proteobacterium
MLMS-1]
Length = 366
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 13/87 (14%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--------- 54
+ D FCG GG ++ ++ F+ + P + T++ NFP T
Sbjct: 12 VFDFFCGCGGTSRGFQKA----GIDVAFALDTGPDAKSTFERNFPGTFFCHKSINELNAS 67
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
D+ I + + PCQPF++
Sbjct: 68 DLEPILQAHKNGYKLFCGCAPCQPFTR 94
>gi|119355930|ref|YP_910574.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM
266]
gi|119353279|gb|ABL64150.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM
266]
Length = 371
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 31/88 (35%), Gaps = 12/88 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV-KTYQANFPNTLIFGDIAKI- 59
+++ D F G GG + + ++ + + ++ + +I I +
Sbjct: 12 IRVYDFFSGCGGTSVGFGRA----GIQHALAVDSCSDAISTYQKNFIGVPVITDPIETLN 67
Query: 60 ------KTQDIPDHDVLLAGFPCQPFSQ 81
P+ + PCQPF++
Sbjct: 68 VDRIQNYFSHNPEVKLFCGCAPCQPFTK 95
>gi|328956110|ref|YP_004373443.1| DNA-cytosine methyltransferase [Coriobacterium glomerans PW2]
gi|328456434|gb|AEB07628.1| DNA-cytosine methyltransferase [Coriobacterium glomerans PW2]
Length = 513
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 35/136 (25%), Gaps = 56/136 (41%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKTYQANFPNT--------LI 52
I DLF G GG+ N + S E +P + +T + +
Sbjct: 7 IIDLFAGAGGLGEGFSSACNESGSPAFKIIMSVEKDPLAHRTLRMRAFFRAAYRACGAMP 66
Query: 53 FGDIAKIKT----------QDIPDHD---------------------------------- 68
I ++ + P+
Sbjct: 67 ASYINYLQNPSAENLEALRNEFPEQWQQANREALCETLKEGDDALVEEAKRRLDAYGSDS 126
Query: 69 -VLLAGFPCQPFSQAG 83
+L+ G PCQ +S G
Sbjct: 127 FILIGGPPCQAYSLVG 142
>gi|218191946|gb|EEC74373.1| hypothetical protein OsI_09692 [Oryza sativa Indica Group]
Length = 921
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 16/94 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + L + ++ S E + + ++ + T I
Sbjct: 555 MNVLSLFSGIGGAEVALHRLGIR--MKTVISVEKSEVNRTILKSWWDQTQTGTLIEIADV 612
Query: 62 QD------------IPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PC AG
Sbjct: 613 RHLTTERIETFIRRFGGFDLVIGGSPCNN--LAG 644
>gi|187939824|gb|ACD38964.1| DNA-cytosine methyltransferase [Pseudomonas aeruginosa]
Length = 572
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 30/86 (34%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
L + GI + +EI P+ Y + + + I
Sbjct: 7 LDFCTMCSGI----EAPSVALEPIGFRARWFAEIEPFPSAVLAHHYPSVPNHGDMTKLIR 62
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
+I T I + +AG PCQ FS AG
Sbjct: 63 RILTGAIEAPPLAIAGTPCQAFSVAG 88
>gi|121634523|ref|YP_974768.1| putative modification methylase NmeDI [Neisseria meningitidis
FAM18]
gi|120866229|emb|CAM09969.1| putative modification methylase NmeDI [Neisseria meningitidis
FAM18]
Length = 383
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 30/102 (29%), Gaps = 26/102 (25%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK--- 60
I F G G + L E + + F +E++P ++ Y+ + I
Sbjct: 21 IFSFFSGAGFLDLGFELS----GFDIAFVNEVHPPFLEAYKYSRSRMDIPKPKYGYFKGS 76
Query: 61 -------------------TQDIPDHDVLLAGFPCQPFSQAG 83
+ + G PC FS AG
Sbjct: 77 IDECLYAEKAKDLAGWVKKEKQNGIIVGFIGGPPCPDFSIAG 118
>gi|49476997|ref|YP_035183.1| modification methylase DdeI; cytosine-specific methyltransferase
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|49328553|gb|AAT59199.1| modification methylase DdeI; possible cytosine-specific
methyltransferase [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 450
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 38/117 (32%), Gaps = 39/117 (33%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-----------NT 50
DLF G GG+ L+ ++ + E+N + +TY AN +
Sbjct: 6 YTSIDLFSGPGGLTTGLKLA----GIKPLIAVEMNNETAETYAANHHVDLLKLEEYLQHK 61
Query: 51 LIFGDIAK------------------------IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I K +K DV+ G PC+ +S AG
Sbjct: 62 NTYEHIFKPSDKSVLILGDVREVTDNLIREILLKRFSKESVDVITGGPPCESYSMAG 118
>gi|325131820|gb|EGC54520.1| DNA-cytosine methyltransferase [Neisseria meningitidis M6190]
gi|325137870|gb|EGC60445.1| cytosine-specific methyltransferase MthTI [Neisseria meningitidis
ES14902]
gi|325197946|gb|ADY93402.1| cytosine-specific methyltransferase MthTI [Neisseria meningitidis
G2136]
Length = 376
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 30/102 (29%), Gaps = 26/102 (25%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK--- 60
I F G G + L E + + F +E++P ++ Y+ + I
Sbjct: 14 IFSFFSGAGFLDLGFELS----GFDIAFVNEVHPPFLEAYKYSRSRMDIPKPKYGYFKGS 69
Query: 61 -------------------TQDIPDHDVLLAGFPCQPFSQAG 83
+ + G PC FS AG
Sbjct: 70 IDECLYAEKAKDLAGWVKKEKQNGIIVGFIGGPPCPDFSIAG 111
>gi|170088424|ref|XP_001875435.1| C5-DNA-methyltransferase [Laccaria bicolor S238N-H82]
gi|164650635|gb|EDR14876.1| C5-DNA-methyltransferase [Laccaria bicolor S238N-H82]
Length = 1309
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 34/122 (27%), Gaps = 48/122 (39%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD---------- 55
+LF G GG+ L ++ + VE ++ E +P + KTY+ L
Sbjct: 798 ELFSGAGGLGLGIDMSGF---VETKYAVEFSPSAAKTYKCRETYFLCIFYAYLFTRTNNP 854
Query: 56 -----------------------------------IAKIKTQDIPDHDVLLAGFPCQPFS 80
Q D + G PCQ FS
Sbjct: 855 DVLVYNQDSSTLLQQALAKDNGKNPPPLLSKDGKTHCPEMPQKGCQVDFIFGGPPCQSFS 914
Query: 81 QA 82
A
Sbjct: 915 LA 916
>gi|15236318|ref|NP_193097.1| MEE57 (maternal effect embryo arrest 57); DNA
(cytosine-5-)-methyltransferase/ DNA binding / protein
binding [Arabidopsis thaliana]
gi|4678387|emb|CAB41119.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis
thaliana]
gi|7268065|emb|CAB78403.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis
thaliana]
gi|332657902|gb|AEE83302.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
Length = 1404
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 35/122 (28%), Gaps = 48/122 (39%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-------NTLIFGDIA 57
D+F G GG+ LE+ + ++ E + + ++ N P N + I+
Sbjct: 972 LDIFAGCGGLSYGLEKAGVS---DTKWAIEYEEPAAQAFKQNHPKTTVFVDNCNVILRIS 1028
Query: 58 KIK--------------------------------------TQDIPDHDVLLAGFPCQPF 79
++ D + G PCQ F
Sbjct: 1029 WLRLLINDRAIMEKCGDVDDCISTTEAAELATKLDENQKSTLPLPGQVDFISGGPPCQGF 1088
Query: 80 SQ 81
S+
Sbjct: 1089 SR 1090
>gi|289616708|emb|CBI56658.1| unnamed protein product [Sordaria macrospora]
Length = 872
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 21/86 (24%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----VKTYQANFPNTLIFGDI 56
D F G GG + H + ++ +
Sbjct: 306 YTAGDTFAGAGGAFCGISDAGLHLEF----CVDNWEHAVASLKANFQGDGTTIYDMDMHD 361
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82
I D+L PCQ +S A
Sbjct: 362 LIINKDIRRRVDILHLSPPCQVWSPA 387
>gi|164510146|emb|CAJ40944.1| putative DNA cytosine methyltransferase [Sordaria macrospora]
Length = 872
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 21/86 (24%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----VKTYQANFPNTLIFGDI 56
D F G GG + H + ++ +
Sbjct: 306 YTAGDTFAGAGGAFCGISDAGLHLEF----CVDNWEHAVASLKANFQGDGTTIYDMDMHD 361
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82
I D+L PCQ +S A
Sbjct: 362 LIINKDIRRRVDILHLSPPCQVWSPA 387
>gi|290999391|ref|XP_002682263.1| cytosine-5 DNA methyltransferase [Naegleria gruberi]
gi|284095890|gb|EFC49519.1| cytosine-5 DNA methyltransferase [Naegleria gruberi]
Length = 1527
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55
+ D+F G GG+ L LE+ + +S E + T+ F + F
Sbjct: 887 ITALDIFSGCGGLSLGLERA----GIHVKYSIEFWKPAADTHHYYFKDCHTFCK 936
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 68 DVLLAGFPCQPFSQ 81
D++ G PCQ FS
Sbjct: 1030 DLIAGGPPCQGFSL 1043
>gi|260890220|ref|ZP_05901483.1| modification methylase EcoRII [Leptotrichia hofstadii F0254]
gi|260859840|gb|EEX74340.1| modification methylase EcoRII [Leptotrichia hofstadii F0254]
Length = 293
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 37 PYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ KT+ N + L DI +K+ D+PD DV++ GFPCQ FS AG
Sbjct: 5 KNAAKTFLKNNDSKLAVDDIHNVKSTDVPDTDVIVGGFPCQAFSIAG 51
>gi|18700045|gb|AAL03947.1| DNA methyltransferase Cfr10IM [Citrobacter freundii]
Length = 362
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 30/100 (30%), Gaps = 24/100 (24%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQA--------NFPNTLIFGD 55
I F G G + L E F +E + ++ Y+ GD
Sbjct: 6 IFSFFSGAGFLDLGFEHA----GFTVEFVNEYHAPFLEAYKFSRKKLGINEPKYGYYLGD 61
Query: 56 IAKIKTQDIPDHD------------VLLAGFPCQPFSQAG 83
I I +Q+ D + G PC FS G
Sbjct: 62 IRDISSQNKEDFRKNVTDAKKSSLVGFIGGPPCPDFSVGG 101
>gi|162463668|ref|NP_001104977.1| hypothetical protein LOC541826 [Zea mays]
gi|7716575|gb|AAF68437.1| putative DNA cytosine methyltransferase Zmet3 [Zea mays]
Length = 603
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 14/87 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+ + LF GIGG + L + + S E + + ++ + T I
Sbjct: 480 MNVLSLFSGIGGAEVALHRLGIR--MNTVISVEKSEVNRTILKSWWDQTQTGTLIEITDV 537
Query: 60 ----------KTQDIPDHDVLLAGFPC 76
+ I D+++ G PC
Sbjct: 538 QTLSSERIEAYIRRIGGFDLVIGGSPC 564
>gi|189199258|ref|XP_001935966.1| C-5 cytosine methyltransferase DmtA [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983065|gb|EDU48553.1| C-5 cytosine methyltransferase DmtA [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 744
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 29/86 (33%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
D+FCG GG Q + + + +++TY+ N P F A
Sbjct: 313 FAFGDVFCGAGGASQGALQA----GYSICWGLDFDHTALETYRLNHPTAHTFELDAHDFP 368
Query: 62 -----QDIPDHDVLLAGFPCQPFSQA 82
DVL PC +S A
Sbjct: 369 PKNVCPKCWKVDVLHLSPPCCYWSPA 394
>gi|260221504|emb|CBA30135.1| hypothetical protein Csp_C22030 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 151
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 8/86 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDI 56
M DLF G G + + ++ + TY+ANFP+ DI
Sbjct: 1 MKHFVDLFSGGGLGARGAVMA----GLTPILAVDMWDMACDTYRANFPSAIALNQRVDDI 56
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82
++ D+LLA C S A
Sbjct: 57 NPLEHIKREAVDLLLASPECTNHSVA 82
>gi|224011395|ref|XP_002295472.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583503|gb|ACI64189.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 738
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 19/90 (21%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT--LIFGDIAKIKT 61
+ DLF G GG+ + LE+ + + P + T + NFPNT ++
Sbjct: 411 VLDLFAGGGGMSVGLERA----GFNVKYKVDNEPSACDTLEKNFPNTLVYRMSLRRFLEE 466
Query: 62 QDIPDHDVLLAGFP---------CQPFSQA 82
+ FP CQ +S A
Sbjct: 467 HKAGQTKI----FPSTIVLLQVLCQGYSSA 492
>gi|223945129|gb|ACN26648.1| unknown [Zea mays]
Length = 603
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 14/87 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+ + LF GIGG + L + + S E + + ++ + T I
Sbjct: 480 MNVLSLFSGIGGAEVALHRLGIQ--MNTVISVEKSEVNRTILKSWWDQTQTGTLIEITDV 537
Query: 60 ----------KTQDIPDHDVLLAGFPC 76
+ I D+++ G PC
Sbjct: 538 QTLSSERIEAYIRRIGGFDLVIGGSPC 564
>gi|330880135|gb|EGH14284.1| modification methylase (cytosine-specific methyltransferase)
[Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 529
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 36/132 (27%), Gaps = 50/132 (37%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--------------------- 40
++I DLF G GG+ + + S+E++P +
Sbjct: 7 IQIVDLFAGPGGLGEGFSSFLDGSRFKIIVSAEMDPVAHSTLRLRAFYRILKNKKKSNLA 66
Query: 41 ----------------KTYQANFPNTLIFGDIAKIKTQDIPDHD-------------VLL 71
K+ + I + D VL+
Sbjct: 67 DYYRFCNGLSDKPFSKKSEEEWAEAEKEAHCITLGTKEGDEKLDKVLDESLDQSKPWVLI 126
Query: 72 AGFPCQPFSQAG 83
G PCQ +S AG
Sbjct: 127 GGPPCQAYSLAG 138
>gi|327356617|gb|EGE85474.1| C-5 cytosine methyltransferase DmtA [Ajellomyces dermatitidis ATCC
18188]
Length = 661
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
D FCG GG+ Q N + + + ++ +++ NF + + +
Sbjct: 324 YTFGDGFCGAGGVSRGALQAGLRLN----WGFDHSLSAMDSFRLNFESAIGYTSDVADFL 379
Query: 62 QDIP---DHDVLLAGFPCQPFSQA 82
+ P D+L PCQ FS A
Sbjct: 380 ANSPAEIMVDILHFSPPCQTFSPA 403
>gi|48374276|gb|AAT41966.1| putative DNA methyl transferase [Fremyella diplosiphon Fd33]
Length = 104
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55
DLF G GG+ L EQ + S EI+P ++ NFP +
Sbjct: 46 VDLFAGAGGMTLGFEQA----GFDVLASVEIDPIHCAIHEFNFPFWKVLCQ 92
>gi|261196301|ref|XP_002624554.1| C-5 cytosine methyltransferase DmtA [Ajellomyces dermatitidis
SLH14081]
gi|239587687|gb|EEQ70330.1| C-5 cytosine methyltransferase DmtA [Ajellomyces dermatitidis
SLH14081]
Length = 661
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
D FCG GG+ Q N + + + ++ +++ NF + + +
Sbjct: 324 YTFGDGFCGAGGVSRGALQAGLRLN----WGFDHSLSAMDSFRLNFESAIGYTSDVADFL 379
Query: 62 QDIP---DHDVLLAGFPCQPFSQA 82
+ P D+L PCQ FS A
Sbjct: 380 ANSPAEIMVDILHFSPPCQTFSPA 403
>gi|38707957|ref|NP_945098.1| gp67 [Burkholderia phage phi1026b]
gi|38505449|gb|AAR23218.1| gp67 [Burkholderia phage phi1026b]
Length = 433
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 26/87 (29%), Gaps = 8/87 (9%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPN------TLIFGDI 56
+L G+G + + H + E + A + +
Sbjct: 9 IELCAGVGMLGEGVRTALEHFGIGHRTVCYVEREATAAAQLAALMEAEAIDQAPIWSDLL 68
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D ++AGFPCQ S AG
Sbjct: 69 TFDGAAWRGRVDCVIAGFPCQDLSVAG 95
>gi|239999928|ref|ZP_04719852.1| NgoIM [Neisseria gonorrhoeae 35/02]
gi|240116859|ref|ZP_04730921.1| NgoIM [Neisseria gonorrhoeae PID1]
gi|240127204|ref|ZP_04739865.1| NgoIM [Neisseria gonorrhoeae SK-93-1035]
Length = 278
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 25/41 (60%)
Query: 43 YQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
FGDI I DIPDHD+LLAGFPCQPFS AG
Sbjct: 1 MYEANFGEKPFGDINGIDPSDIPDHDILLAGFPCQPFSIAG 41
>gi|239614647|gb|EEQ91634.1| C-5 cytosine methyltransferase DmtA [Ajellomyces dermatitidis ER-3]
Length = 661
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
D FCG GG+ Q N + + + ++ +++ NF + + +
Sbjct: 324 YTFGDGFCGAGGVSRGALQAGLRLN----WGFDHSLSAMDSFRLNFESAIGYTSDVADFL 379
Query: 62 QDIP---DHDVLLAGFPCQPFSQA 82
+ P D+L PCQ FS A
Sbjct: 380 ANSPAEIMVDILHFSPPCQTFSPA 403
>gi|116062016|dbj|BAF34636.1| DNA methyltransferase 1b [Brassica rapa]
Length = 1519
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 26/110 (23%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN--------PYSVKTYQANFPNTLIFGDI 56
D+F G GG+ LEQ ++ E +T + I
Sbjct: 1082 LDIFAGCGGLSQGLEQAGVSA---TKWAIEYEGPAGEAFRKNHPETTVIVDNCNVTLRAI 1138
Query: 57 AKIKTQD--------------------------IPDHDVLLAGFPCQPFS 80
+ D + G PCQ FS
Sbjct: 1139 MEKCGDQDECISTTEANELAAKLDENQKRTLPLPGQVDFINGGPPCQGFS 1188
>gi|147919344|ref|YP_686920.1| C-5 cytosine-specific DNA methyltransferase [uncultured
methanogenic archaeon RC-I]
gi|110622316|emb|CAJ37594.1| C-5 cytosine-specific DNA methyltransferase [uncultured
methanogenic archaeon RC-I]
Length = 419
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 34/132 (25%), Gaps = 54/132 (40%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS---------------------- 39
+ DLF G GG+ + E + ++
Sbjct: 5 YTVLDLFSGAGGLTEGF----YRNGFDIISHIEKDEFASKTLQTRSLYYALLKINKVHIY 60
Query: 40 ---------------VKTYQANFPNTLIFGDI-------------AKIKTQDIPDHDVLL 71
+ +I +I ++ ++I +V++
Sbjct: 61 YNYYNNRINRDEFLKQCCELGIDNSEVIHEEISLITEDSLIDKINTQLIKRNINKINVVI 120
Query: 72 AGFPCQPFSQAG 83
G PCQ +S G
Sbjct: 121 GGPPCQAYSLIG 132
>gi|124262880|ref|YP_001023350.1| C-5 cytosine-specific DNA methylase [Methylibium petroleiphilum
PM1]
gi|124262126|gb|ABM97115.1| C-5 cytosine-specific DNA methylase [Methylibium petroleiphilum
PM1]
Length = 473
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 12/87 (13%)
Query: 9 CGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFPNTLIFG-----DIAKIKT 61
GIG + + VEC F++EI V+ + P + ++
Sbjct: 135 SGIGVLDRAAHEGLEQAGVECRLAFANEIREDCVEHMCDHNPIVDQHTVTLTAPMQELAF 194
Query: 62 QDI-----PDHDVLLAGFPCQPFSQAG 83
+ P DVL+ G PC S+AG
Sbjct: 195 DEWAMSRLPKVDVLVGGIPCSGASRAG 221
>gi|237746251|ref|ZP_04576731.1| C-5 cytosine-specific DNA methylase [Oxalobacter formigenes
HOxBLS]
gi|229377602|gb|EEO27693.1| C-5 cytosine-specific DNA methylase [Oxalobacter formigenes
HOxBLS]
Length = 489
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKI 59
I DLF G GG +EQ + +P + + +I +
Sbjct: 15 IVDLFAGGGGASTGIEQA---IGRHVDIAINHDPEAIALHAANHPQTKHYCTDVFEIDPV 71
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ +L A C+ FS+A
Sbjct: 72 SATNSQPVGLLWASPDCKHFSKA 94
>gi|255553977|ref|XP_002518029.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223543011|gb|EEF44547.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1542
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 27/110 (24%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS------------------------- 39
D+F G GG+ L+Q ++ E +
Sbjct: 1109 LDIFSGCGGLSEGLQQAGVSS---TKWAIEYEEPAGEAFKLNHPESLVFINNCNVILRAV 1165
Query: 40 VKTYQANFPNTLIFGDIAKIKTQD---------IPDHDVLLAGFPCQPFS 80
++ I + D D + G PCQ FS
Sbjct: 1166 MEKCGDTDDCISTSEAIELAASLDEKIINDLPLPGQVDFINGGPPCQGFS 1215
>gi|146301288|ref|YP_001195879.1| hypothetical protein Fjoh_3546 [Flavobacterium johnsoniae UW101]
gi|146155706|gb|ABQ06560.1| hypothetical protein Fjoh_3546 [Flavobacterium johnsoniae UW101]
Length = 216
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIK 60
+K+ +L+ GIGG R + + E++P + + +T++ GD +
Sbjct: 1 MKVLNLYAGIGGNRKNWTDV-------TVTAVELDPQLAAVYAEHFPQDTVVVGDAHQYL 53
Query: 61 TQDIPDHDVLLAGFPCQPFS 80
+ D + + PCQ S
Sbjct: 54 IDHHNEFDFIWSSPPCQSHS 73
>gi|325269502|ref|ZP_08136118.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM
16608]
gi|324988121|gb|EGC20088.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM
16608]
Length = 393
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDH 67
F GIG I + + + F+ +I+ KTY AN+P + + D +
Sbjct: 39 FSGIGAIEHSMHRLG--LKCQIQFAGDIDANCKKTYFANYPISEAQWH-TDVHDFDAKPY 95
Query: 68 ----DVLLAGFPCQPFSQAG 83
D+ + G PCQ FS G
Sbjct: 96 KGKVDLFVGGAPCQAFSLRG 115
>gi|24431594|gb|AAN61474.1| Putative DNA cytosine methyltransferase Zmet3 [Oryza sativa
Japonica Group]
Length = 881
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 14/87 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + L + H ++ S E + + ++ + T I
Sbjct: 680 MNVLSLFSGIGGAEVALHRLGIH--MKTVISVEKSEVNRTILKSWWDQTQTGTLIEIADV 737
Query: 62 QD------------IPDHDVLLAGFPC 76
+ D+++ G PC
Sbjct: 738 RHLTTERIETFIRRFGGFDLVIGGSPC 764
>gi|325141979|gb|EGC64416.1| cytosine-specific methyltransferase MthTI [Neisseria meningitidis
961-5945]
Length = 364
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 30/102 (29%), Gaps = 26/102 (25%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK--- 60
I F G G + L E + + F +E++P ++ Y+ + I
Sbjct: 2 IFSFFSGAGFLDLGFELS----GFDIAFVNEVHPPFLEAYKYSRSRMDIPKPKYGYFKGS 57
Query: 61 -------------------TQDIPDHDVLLAGFPCQPFSQAG 83
+ + G PC FS AG
Sbjct: 58 IDECLYAEKAKDLAGWVKKEKQNGIIVGFIGGPPCPDFSIAG 99
>gi|224144433|ref|XP_002325288.1| DNA methyltransferase [Populus trichocarpa]
gi|222862163|gb|EEE99669.1| DNA methyltransferase [Populus trichocarpa]
Length = 1549
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63
D+F G GG+ L+Q ++ E + + ++ N +L+F + + +
Sbjct: 1115 LDIFAGCGGLSEGLQQAGVST---TKWAIEYEEPAGEAFKLNHAESLMFINNCNVILRAV 1171
Query: 64 ---------------------------------IPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 1172 MERCGDADDCISTSEAAKMASSLDAKVIDGLPLPGQVDFINGGPPCQGFS 1221
>gi|261403447|ref|YP_003247671.1| DNA-cytosine methyltransferase [Methanocaldococcus vulcanius M7]
gi|261370440|gb|ACX73189.1| DNA-cytosine methyltransferase [Methanocaldococcus vulcanius M7]
Length = 364
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY 43
+LK DLFCG GG + S E+N + +Y
Sbjct: 3 ILKFVDLFCGCGGFSRGF----VEEGFKPLVSVELNEDAAFSY 41
>gi|295836816|ref|ZP_06823749.1| modification methylase NaeI [Streptomyces sp. SPB74]
gi|295826219|gb|EDY44437.2| modification methylase NaeI [Streptomyces sp. SPB74]
Length = 449
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 33/103 (32%), Gaps = 25/103 (24%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53
L ++ G GG L L E + +V T ++N T +
Sbjct: 14 LTSVEICAGAGGQALGLHNA----GFGHSALVEWDANAVGTLRSNSVRTFGWSSEKAAGL 69
Query: 54 --GDIAKIKTQDI-----------PDHDVLLAGFPCQPFSQAG 83
D+ K ++ D+ G PC PFS AG
Sbjct: 70 RNMDVRDFKNEEDFKALKKAADAGRYIDLFAGGVPCPPFSLAG 112
>gi|119513472|ref|ZP_01632497.1| cytosine-specific DNA methyltransferase [Nodularia spumigena
CCY9414]
gi|119461873|gb|EAW42885.1| cytosine-specific DNA methyltransferase [Nodularia spumigena
CCY9414]
Length = 400
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 30/105 (28%), Gaps = 29/105 (27%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-------- 55
I F G G + L E + + +EI +K Y+ + +
Sbjct: 7 IFSFFSGSGFLDLGFE----NSGFNIVYVNEIFKPFMKAYRYSREILKLPQPEYGYHEGE 62
Query: 56 ---------------IAKIKTQDIPDHDVL--LAGFPCQPFSQAG 83
+ ++ ++ + G PC FS G
Sbjct: 63 AADVSKLITGTEGQRLHELVKDCRKSDHIIGFIGGPPCPDFSVGG 107
>gi|260439066|ref|ZP_05792882.1| C-5 cytosine-specific DNA methylase family protein [Butyrivibrio
crossotus DSM 2876]
gi|292808523|gb|EFF67728.1| C-5 cytosine-specific DNA methylase family protein [Butyrivibrio
crossotus DSM 2876]
Length = 428
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 23/91 (25%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI---------NPYSVKTYQANFPNTLI 52
LF G L L + + EI N L
Sbjct: 5 YNAISLFSSSGIGDLGLH----ANGINTVTACEIIEERMALFKNNNPNTKCFCGDIWKLE 60
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + + ++LA PCQ S G
Sbjct: 61 KDIIDDYNERFSENPFLILATPPCQGMSPNG 91
>gi|228936963|ref|ZP_04099705.1| Cytosine-specific methyltransferase [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228822678|gb|EEM68568.1| Cytosine-specific methyltransferase [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 326
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
++KI +LF GIG R L + E VK Y A + + D+
Sbjct: 3 LIKILELFGGIGAPRKALVNLGID--YKAIDYVEWQANRVKAYNALYDHLHKPQDVRGWN 60
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
D+L+ G PCQ S+A
Sbjct: 61 L----KPDILVHGSPCQDNSRA 78
>gi|227874220|ref|ZP_03992420.1| DNA (cytosine-5-)-methyltransferase [Oribacterium sinus F0268]
gi|227839928|gb|EEJ50358.1| DNA (cytosine-5-)-methyltransferase [Oribacterium sinus F0268]
Length = 336
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 31/92 (33%), Gaps = 13/92 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------ 54
ML +LF L + E N + T N PN +
Sbjct: 1 MLTAIELF----AGAGGLALGLEKAGFQSLGLIEFNQDACNTLSKNRPNWRVICEDIANI 56
Query: 55 ---DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ + + + D+L G PCQ FS AG
Sbjct: 57 SKLDLEQYFSIKKGELDLLSGGAPCQAFSYAG 88
>gi|302520934|ref|ZP_07273276.1| phage DNA methylase [Streptomyces sp. SPB78]
gi|302429829|gb|EFL01645.1| phage DNA methylase [Streptomyces sp. SPB78]
Length = 190
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ-- 62
L G + +E + + +E +P + + A P+ GDI + Q
Sbjct: 14 ISLCTGSAALDQAVE---HVTGLTTVAVAEKDPAASRLLAARVPHARNLGDITAVDWQHV 70
Query: 63 --DIPDHDVLLAGFPCQPFSQAG 83
++P L AGFPCQ S AG
Sbjct: 71 AAELPRPAALTAGFPCQDISNAG 93
>gi|94971290|ref|YP_593338.1| DNA-cytosine methyltransferase [Candidatus Koribacter versatilis
Ellin345]
gi|94553340|gb|ABF43264.1| DNA-cytosine methyltransferase [Candidatus Koribacter versatilis
Ellin345]
Length = 508
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 34/132 (25%), Gaps = 49/132 (37%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSV-------KTYQANFPNT 50
M+ + DLF G GG+ + S E +P + Q
Sbjct: 1 MIPVIDLFAGPGGLGEGFSALRDDAGRRVFRIGLSIEKDPAAHKTLLLRSFFRQFEIAPN 60
Query: 51 LIFGDIA--------------------------KIKTQDIPDHD-------------VLL 71
+ + ++ D D D VL+
Sbjct: 61 QYYSYVRGELAISQLIEAFPTQYGSAQEEALCVELGKHDWTDIDSRIRRAIGDFKNWVLI 120
Query: 72 AGFPCQPFSQAG 83
G PCQ +S G
Sbjct: 121 GGPPCQAYSLVG 132
>gi|73948843|ref|XP_849815.1| PREDICTED: similar to DNA methyltransferase 3A isoform 1 [Canis
familiaris]
Length = 530
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ LF GI L L+ V+C+ +SE+ S+ + + + I +
Sbjct: 257 IRVLSLFDGIATGLLVLKDLGIQ--VDCYIASEVCKDSITVGKIMYVGDVC--SITQKHI 312
Query: 62 QDIPDHDVLLAGFPCQPFSQ 81
Q+ D+++ G PC S
Sbjct: 313 QEWGPLDLVIGGSPCNGLSI 332
>gi|224077654|ref|XP_002305346.1| DNA methyltransferase [Populus trichocarpa]
gi|222848310|gb|EEE85857.1| DNA methyltransferase [Populus trichocarpa]
Length = 1529
Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63
D+F G GG+ L+Q ++ E + + ++ N +L+F + + +
Sbjct: 1095 LDIFAGCGGLSEGLQQAGVSS---TKWAIEYEEPAGEAFKLNHAGSLMFINNCNVILRAV 1151
Query: 64 ---------------------------------IPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 1152 MEKCGDADDCISTSEAGELASSLDAKVIDGLPLPGQVDFINGGPPCQGFS 1201
>gi|2895089|gb|AAC39356.1| Met2-type cytosine DNA-methyltransferase [Daucus carota]
Length = 1761
Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59
D+F G GG+ L+Q+ ++ E + ++ N P+T +F + +
Sbjct: 1326 LDIFAGCGGLSEGLQQSGV---CRTKWAIEYEEPAGDAFKLNHPDTTMFINNCNVILKAI 1382
Query: 60 -----------------------------KTQDIPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 1383 MDKSGDADDCISTPEAADLAAKLSEEELKNLPLPGQVDFINGGPPCQGFS 1432
>gi|239981227|ref|ZP_04703751.1| hypothetical protein SalbJ_17454 [Streptomyces albus J1074]
gi|291453090|ref|ZP_06592480.1| gp77 [Streptomyces albus J1074]
gi|291356039|gb|EFE82941.1| gp77 [Streptomyces albus J1074]
Length = 218
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DL CG GG+ + ++NP + + + L + I T
Sbjct: 14 RVLDLCCGAGGLSMGYHLAGFD-----VTGVDLNPQPNYPFTFHQADALTYLA-DLITTG 67
Query: 63 DIPDHDVLLAGFPCQPF 79
I + D++ A +PCQ F
Sbjct: 68 RIHNFDLVHASWPCQHF 84
>gi|313678987|ref|YP_004056726.1| c-5 cytosine-specific DNA methylase [Oceanithermus profundus DSM
14977]
gi|313151702|gb|ADR35553.1| C-5 cytosine-specific DNA methylase [Oceanithermus profundus DSM
14977]
Length = 322
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 10/85 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP-----YSVKTYQANFPNTLIFGDI 56
+++ DL+ G+GGI Q +INP + + L I
Sbjct: 1 MRVIDLYAGMGGISWGFSQ----EGF-HVTGLDINPLSPDIFELNGIGKVIVTDLRDYQI 55
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ + + VL+ G C+P+S
Sbjct: 56 QNLVPRVREEPLVLVGGPSCRPWSN 80
>gi|3132825|gb|AAC16389.1| putative cytosine-5 DNA methyltransferase [Zea mays]
Length = 1525
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 29/110 (26%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAKIK 60
D+F G GG+ L+Q ++ E + + + N P I K
Sbjct: 1084 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFNKNHPEAVVFVDNCNVILKAI 1140
Query: 61 TQDIPDHD------------------------------VLLAGFPCQPFS 80
D D + G PCQ FS
Sbjct: 1141 MDKCGDTDDCVSTSEAAEQAAKLPEVNINNLPVPGEVEFINGGPPCQGFS 1190
>gi|187934575|ref|YP_001885133.1| DNA methyltransferase [Clostridium botulinum B str. Eklund 17B]
gi|187722728|gb|ACD23949.1| DNA (cytosine-5-)-methyltransferase [Clostridium botulinum B str.
Eklund 17B]
Length = 213
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 27/81 (33%), Gaps = 9/81 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ +LF G I E+ + +S E N + DI
Sbjct: 4 MKVLELFAGTRSIGKAFEKNGHE-----VYSIEWNKDFENIDWNTDIGKIKANDI----L 54
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
+ DV+ A C +S A
Sbjct: 55 ERFGKPDVIWASPDCTSYSIA 75
>gi|325279948|ref|YP_004252490.1| DNA-cytosine methyltransferase [Odoribacter splanchnicus DSM
20712]
gi|324311757|gb|ADY32310.1| DNA-cytosine methyltransferase [Odoribacter splanchnicus DSM
20712]
Length = 359
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 30/90 (33%), Gaps = 14/90 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-NPYSVKTYQANFPNTLIFGDIAKIK 60
L+ D FCG GG+ L Q VE ++ N + DI K++
Sbjct: 4 LRAIDFFCGGGGMTCGLRQA----GVEVMAGVDLAEECESTYEANNPGTKFVGADITKLE 59
Query: 61 TQDIPDHD---------VLLAGFPCQPFSQ 81
VL+ PCQ +S
Sbjct: 60 ENYFEKQFGLIRNDDNLVLVGCSPCQYYSI 89
>gi|303277675|ref|XP_003058131.1| DNA methyltransferase [Micromonas pusilla CCMP1545]
gi|226460788|gb|EEH58082.1| DNA methyltransferase [Micromonas pusilla CCMP1545]
Length = 416
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ + F G G +R+ L++ R VE + + + + Y ANFPN ++
Sbjct: 62 IRLVEWFSGTGMMRVALDR-GTSRGVEHVAAIDNSEVANAVYAANFPNDATPPSRGNVEH 120
Query: 62 QDIPDHD--------VLLAGFPCQPFSQAG 83
D + PCQP+++ G
Sbjct: 121 WTAARIDAEGLGAAELWTLSPPCQPYTRKG 150
>gi|260431282|ref|ZP_05785253.1| DNA-cytosine methyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415110|gb|EEX08369.1| DNA-cytosine methyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 497
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 36/132 (27%), Gaps = 50/132 (37%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKT----------------Y 43
I DLF G GG+ Q ++ S E++ ++++T Y
Sbjct: 5 FAIIDLFAGPGGLGEGFSQAGRDPGAPMKIKLSVEMDDHAIQTLQLRAFLRSFDEFPQEY 64
Query: 44 QANFPNTLIFGDIAKIKTQDIP--------------------------------DHDVLL 71
D A + + + +L+
Sbjct: 65 HDALNCGSPLPDWADLYPANWKLAKEEARQRVLGESGVFEELAVELDRTREDYNGNTILI 124
Query: 72 AGFPCQPFSQAG 83
G PCQ +S G
Sbjct: 125 GGPPCQAYSLVG 136
>gi|317489196|ref|ZP_07947714.1| DNA methyltransferase [Eggerthella sp. 1_3_56FAA]
gi|325832287|ref|ZP_08165286.1| hypothetical protein HMPREF9404_4959 [Eggerthella sp. HGA1]
gi|316911704|gb|EFV33295.1| DNA methyltransferase [Eggerthella sp. 1_3_56FAA]
gi|325486123|gb|EGC88577.1| hypothetical protein HMPREF9404_4959 [Eggerthella sp. HGA1]
Length = 261
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 27/82 (32%), Gaps = 10/82 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ +LF G I E+ + FS E + A+ +
Sbjct: 40 MKVLELFSGTRSIGEAFEKRGHE-----VFSVEWDESLPADLHADIEFLKAPDVLRAF-- 92
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
DV+ A C FS AG
Sbjct: 93 ---GRPDVVWASPDCATFSMAG 111
>gi|163751396|ref|ZP_02158621.1| probable C-5 cytosine-specific DNA methylase [Shewanella benthica
KT99]
gi|161328699|gb|EDP99847.1| probable C-5 cytosine-specific DNA methylase [Shewanella benthica
KT99]
Length = 532
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF 47
+ +LF G GG+ L L++ + ++E++P + +T+ NF
Sbjct: 1 MNHIELFAGCGGLSLGLDKA----GFKLIMANELSPMAAETFAYNF 42
Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 65 PDHDVLLAGFPCQPFSQAG 83
D++ G PCQ FS AG
Sbjct: 133 GGLDLVSGGPPCQSFSMAG 151
>gi|296535365|ref|ZP_06897565.1| site-specific DNA methylase [Roseomonas cervicalis ATCC 49957]
gi|296264307|gb|EFH10732.1| site-specific DNA methylase [Roseomonas cervicalis ATCC 49957]
Length = 337
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIK 60
+++ DLFCG GG ++ E + + + +
Sbjct: 3 IRVLDLFCGGGGSSWGAQRA----GAEIVCGVDAWDKAVEAYGLNFGREKVRHLTLTPDT 58
Query: 61 TQ----DIPDHDVLLAGFPCQPFSQA 82
DI D++LA C + A
Sbjct: 59 GPEALGDIGPIDLILASPECTHHTCA 84
>gi|222636555|gb|EEE66687.1| hypothetical protein OsJ_23341 [Oryza sativa Japonica Group]
Length = 1555
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 27/110 (24%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKIK 60
D+F G GG+ L+Q ++ E + K + I K
Sbjct: 1122 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1178
Query: 61 TQDIPDHD------------------------------VLLAGFPCQPFS 80
D D + G PCQ FS
Sbjct: 1179 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFS 1228
>gi|171196104|dbj|BAG15930.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1486
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 27/110 (24%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKIK 60
D+F G GG+ L+Q ++ E + K + I K
Sbjct: 1053 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1109
Query: 61 TQDIPDHD------------------------------VLLAGFPCQPFS 80
D D + G PCQ FS
Sbjct: 1110 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFS 1159
>gi|257096314|sp|B1Q3J6|DNM1B_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1B; Short=OsMET1b;
AltName: Full=DNA methyltransferase 1-2; Short=OsMET1-2
gi|171196103|dbj|BAG15929.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1529
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 27/110 (24%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKIK 60
D+F G GG+ L+Q ++ E + K + I K
Sbjct: 1096 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1152
Query: 61 TQDIPDHD------------------------------VLLAGFPCQPFS 80
D D + G PCQ FS
Sbjct: 1153 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFS 1202
>gi|37201980|tpg|DAA01513.1| TPA_exp: putative cytosine-5 DNA methyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 1497
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 27/110 (24%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKIK 60
D+F G GG+ L+Q ++ E + K + I K
Sbjct: 1064 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1120
Query: 61 TQDIPDHD------------------------------VLLAGFPCQPFS 80
D D + G PCQ FS
Sbjct: 1121 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFS 1170
>gi|50509186|dbj|BAD30340.1| putative DNA methyltransferase [Oryza sativa Japonica Group]
Length = 1548
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 27/110 (24%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKIK 60
D+F G GG+ L+Q ++ E + K + I K
Sbjct: 1115 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1171
Query: 61 TQDIPDHD------------------------------VLLAGFPCQPFS 80
D D + G PCQ FS
Sbjct: 1172 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFS 1221
>gi|307191164|gb|EFN74862.1| DNA (cytosine-5)-methyltransferase 3A [Camponotus floridanus]
Length = 704
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
+++ LF G+ L L V+ +++SEI+ + + DI
Sbjct: 401 IRVLSLFDGLSTGFLVLLNLGIV--VDVYYASEIDKNALTISSAHFGDRITYLGDVRDIT 458
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K K Q+I D+L+ G PC S
Sbjct: 459 KEKIQEIAPIDLLIGGSPCNDLSL 482
>gi|167747653|ref|ZP_02419780.1| hypothetical protein ANACAC_02374 [Anaerostipes caccae DSM 14662]
gi|239625035|ref|ZP_04668066.1| modification methylase Rho11sI [Clostridiales bacterium
1_7_47_FAA]
gi|167653015|gb|EDR97144.1| hypothetical protein ANACAC_02374 [Anaerostipes caccae DSM 14662]
gi|239521421|gb|EEQ61287.1| modification methylase Rho11sI [Clostridiales bacterium
1_7_47FAA]
Length = 504
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFG--DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ E + Y+VK+Y A DI K+ + +P + + G PCQ FS +G
Sbjct: 3 YKLINFCEFDKYAVKSYCAIHGVDESANLGDITKVDEKKLPYFNFICGGSPCQDFSLSG 61
>gi|307704727|ref|ZP_07641624.1| modification methylase, putative [Streptococcus mitis SK597]
gi|307621706|gb|EFO00746.1| modification methylase, putative [Streptococcus mitis SK597]
Length = 426
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 25/92 (27%), Gaps = 13/92 (14%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP---------YSVKTYQANFPNTL 51
M LF G L L +E + E+ L
Sbjct: 1 MKNAISLFSSSGIGDLGLH----KNGIETVVACELLKERAELFQVNNPNSKVFNGDIWEL 56
Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +T + ++LA PCQ S G
Sbjct: 57 EDDIVDYYQTNFKGNPFIILATPPCQGMSSNG 88
>gi|242043138|ref|XP_002459440.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor]
gi|241922817|gb|EER95961.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor]
Length = 1397
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 27/110 (24%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKIK 60
D+F G GG+ L+Q ++ E + K + I K
Sbjct: 955 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFSKNHPEAVVFVDNCNVILKAI 1011
Query: 61 TQDIPDHD------------------------------VLLAGFPCQPFS 80
D D + G PCQ FS
Sbjct: 1012 MDKCGDTDDCISTSEAAEQAAKLPELNINNLPVPGEVEFINGGPPCQGFS 1061
>gi|223995915|ref|XP_002287631.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976747|gb|EED95074.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 319
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 27/83 (32%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++F GIGG + LE I GDI ++
Sbjct: 194 FSYAEMFAGIGGFGVALEALGGS--------------------------WIHGDIYEVPD 227
Query: 62 QDIPDH-DVLLAGFPCQPFSQAG 83
P D+L+AGFPCQPFS G
Sbjct: 228 SAFPKDLDLLVAGFPCQPFSTLG 250
>gi|89901847|ref|YP_524318.1| DNA-cytosine methyltransferase [Rhodoferax ferrireducens T118]
gi|89346584|gb|ABD70787.1| DNA-cytosine methyltransferase [Rhodoferax ferrireducens T118]
Length = 517
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 37/133 (27%), Gaps = 53/133 (39%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKT-------------YQANF 47
+ DLF G GG+ F+ S E +P + +T +
Sbjct: 9 VIDLFAGPGGLCEGFSSIFDETGARRFAVKVSIEKDPVAHRTLLLRAIFRKFAKGKVPDC 68
Query: 48 PNTLIFGDIAKIKTQDIPD-------------------------------------HDVL 70
+ G+I + + PD VL
Sbjct: 69 YYEYLRGNITREQFFAHPDIKDAAEHAAKEAKCAELGLTPHAEIDSWISEALGDKTDWVL 128
Query: 71 LAGFPCQPFSQAG 83
+ G PCQ +S AG
Sbjct: 129 IGGPPCQAYSLAG 141
>gi|332308313|ref|YP_004436164.1| DNA-cytosine methyltransferase [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175642|gb|AEE24896.1| DNA-cytosine methyltransferase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 522
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 33/134 (24%), Gaps = 53/134 (39%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKTYQANFPNTLIFGDI--- 56
KI DLF G GG+ + + S E + +T + +
Sbjct: 6 KIIDLFSGPGGLSEGFSALKDPNGNSPFKIAISIEKEKSAHRTLKLRAFFRQFGDAVPSE 65
Query: 57 -----------------------------------------------AKIKTQDIPDHDV 69
+KI D V
Sbjct: 66 YYEFLKGELGKTPEEQLYKIPKFSEQVSAAESEAQNLELGKDNDLITSKIAKAIGNDDCV 125
Query: 70 LLAGFPCQPFSQAG 83
L+ G PCQ +S AG
Sbjct: 126 LIGGPPCQAYSLAG 139
>gi|162463699|ref|NP_001105186.1| DNA methyl transferase1 [Zea mays]
gi|20977598|gb|AAM28226.1| DNA methyltransferase 101 [Zea mays]
Length = 1457
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 29/110 (26%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAKIK 60
D+F G GG+ L+Q ++ E + + + N P I K
Sbjct: 1016 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFNKNHPEAVVFVDNCNVILKAI 1072
Query: 61 TQDIPDHD------------------------------VLLAGFPCQPFS 80
D D + G PCQ FS
Sbjct: 1073 MDKCGDTDDCVSTSEAAEQAAKLPEVNINNLPVPGEVEFINGGPPCQGFS 1122
>gi|83950654|ref|ZP_00959387.1| modification methylase (Cytosine-specific methyltransferase
[Roseovarius nubinhibens ISM]
gi|83838553|gb|EAP77849.1| modification methylase (Cytosine-specific methyltransferase
[Roseovarius nubinhibens ISM]
Length = 504
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 34/131 (25%), Gaps = 51/131 (38%)
Query: 4 ITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEIN------------------------- 36
I DLF G GG+ Q +++ S E+
Sbjct: 7 IIDLFAGPGGLGEGFTQAGRAGDVSMKIQLSVEMEANAVQTLRLRSFLRRFGEEFPAEYY 66
Query: 37 -------PYSVKTYQANFPNTLIFGDIAKIKTQDIPDHD-----------------VLLA 72
+ + ++ ++ D D +L+
Sbjct: 67 AALNKGVEFPNWSELYPEEWKHAEQEVRQLVLGDPGVFDEIAVVIDKVRTDFQGNTILIG 126
Query: 73 GFPCQPFSQAG 83
G PCQ +S AG
Sbjct: 127 GPPCQAYSLAG 137
>gi|303285424|ref|XP_003062002.1| DNA methyltransferase [Micromonas pusilla CCMP1545]
gi|226456413|gb|EEH53714.1| DNA methyltransferase [Micromonas pusilla CCMP1545]
Length = 338
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----K 58
+ + +CG+GG+ L + + ++NP++ TY NF +
Sbjct: 13 RALEFYCGVGGLHYALLRARPDA--TVAAAFDLNPHACDTYAFNFGDAARPIARNLASYP 70
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D + L PCQPF++ G
Sbjct: 71 AASIDAHAASLWLLSPPCQPFTRQG 95
>gi|225619640|ref|YP_002720897.1| adenine/cytosine DNA methyltransferase [Brachyspira
hyodysenteriae WA1]
gi|225214459|gb|ACN83193.1| adenine/cytosine DNA methyltransferase [Brachyspira
hyodysenteriae WA1]
Length = 812
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 29/96 (30%), Gaps = 19/96 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L LF G G + + N+ +C + E + + N I +
Sbjct: 3 LSYISLFSGAG---IGCYK-LNNLGFKCIATVEKEYKRLLIQKTNKKCENESSYICADLS 58
Query: 62 QDIPDHDV---------------LLAGFPCQPFSQA 82
D D+ L+A PCQ S A
Sbjct: 59 LDSTKQDIYDIVNKRLGNDSLTLLVATPPCQGMSVA 94
>gi|325096531|gb|EGC49841.1| C-5 cytosine methyltransferase DmtA [Ajellomyces capsulatus H88]
Length = 651
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
D FCG GG+ Q N + + + ++ +++ NF + +
Sbjct: 324 YTFGDGFCGAGGVSRGALQAGLRLN----WGFDHSISAMDSFRLNFETAIGYTSDVADFL 379
Query: 61 --TQDIPDHDVLLAGFPCQPFSQA 82
+ D+L PCQ FS A
Sbjct: 380 ASSHTEIMVDILHFSPPCQTFSPA 403
>gi|219882789|ref|YP_002477953.1| C-5 cytosine-specific DNA methylase [Arthrobacter
chlorophenolicus A6]
gi|219861795|gb|ACL42136.1| C-5 cytosine-specific DNA methylase [Arthrobacter
chlorophenolicus A6]
Length = 316
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I DLF G GG E + F E++ + + G++ +K D
Sbjct: 9 ILDLFAGPGGWDRGAELAGIDP--KRFVGIELD-AAAVQTARAAGYNRVHGNVLDVKPSD 65
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
P L+A PC FS +G
Sbjct: 66 YPRVKGLIASAPCPTFSSSG 85
>gi|74012168|ref|XP_850348.1| PREDICTED: similar to DNA methyltransferase 3A isoform 1 [Canis
familiaris]
Length = 531
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ LF GI L L+ V+C+ +SE+ S+ + + + + +
Sbjct: 258 IRVLSLFDGIATGLLVLKDLGIQ--VDCYIASEVCKDSITVGKIMYVGDVC--SVTQKHI 313
Query: 62 QDIPDHDVLLAGFPCQPFSQ 81
Q+ D+++ G PC S
Sbjct: 314 QEWGPLDLVIGGSPCNGLSI 333
>gi|327289287|ref|XP_003229356.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B, partial [Anolis
carolinensis]
Length = 418
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L VE + +SEI S+ ++ N +I
Sbjct: 142 IRVLSLFDGIATGYLVLRDLGIK--VEKYVASEICEESIAVGTVRHEGNITYVHDVRNIT 199
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K + D+++ G PC S
Sbjct: 200 KRNIDEWGPFDLVIGGSPCNDLSI 223
>gi|320109254|ref|YP_004184844.1| hypothetical protein AciPR4_4102 [Terriglobus saanensis SP1PR4]
gi|319927775|gb|ADV84850.1| hypothetical protein AciPR4_4102 [Terriglobus saanensis SP1PR4]
Length = 248
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 11/78 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLFC GG + + + +INP ++ ++
Sbjct: 27 RLLDLFCCAGGAGVGYSRA----GFDVVG-VDINPQPRYPLPFIQA------NVFQLDFN 75
Query: 63 DIPDHDVLLAGFPCQPFS 80
+ D + A PCQ +S
Sbjct: 76 FLTSFDAIHASPPCQSYS 93
>gi|218199194|gb|EEC81621.1| hypothetical protein OsI_25142 [Oryza sativa Indica Group]
Length = 1538
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 27/110 (24%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKIK 60
D+F G GG+ L+Q ++ E + K + I K
Sbjct: 1105 LDIFAGCGGLSQGLQQAGVSF---TKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1161
Query: 61 TQDIPDHD------------------------------VLLAGFPCQPFS 80
D D + G PCQ FS
Sbjct: 1162 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFS 1211
>gi|154277578|ref|XP_001539629.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413214|gb|EDN08597.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 699
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 24/83 (28%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
D FCG GG+ Q + + S+ S +
Sbjct: 323 YTFGDGFCGAGGVSRGALQAGLRLNWGFDHSVSA---MDSFRLNFETAIGYTSDVADFLA 379
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ D+L PCQ FS A
Sbjct: 380 NSHTEIMVDILHFSPPCQTFSPA 402
>gi|60544836|gb|AAX22756.1| DMT1 [Arabidopsis thaliana]
Length = 1431
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63
D+F G GG+ L++ + ++ E + + ++ N P + +F D + +
Sbjct: 1064 LDIFAGCGGLSHGLKKAGVS---DAKWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAI 1120
Query: 64 ---------------------------------IPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 1121 MEKGGDQDDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGFS 1170
>gi|15239810|ref|NP_199727.1| MET1 (METHYLTRANSFERASE 1); methyltransferase [Arabidopsis thaliana]
gi|462650|sp|P34881|DNMT1_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName: Full=DNA
methyltransferase 01; AltName: Full=DNA methyltransferase
2; AltName: Full=DNA methyltransferase AthI; Short=DNA
Metase AthI; Short=M.AthI; AltName: Full=DNA
methyltransferase DDM2; AltName: Full=Protein DECREASED
DNA METHYLATION 2
gi|304107|gb|AAA32829.1| cytosine-5 methyltransferase [Arabidopsis thaliana]
gi|10177145|dbj|BAB10334.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
gi|332008394|gb|AED95777.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana]
Length = 1534
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63
D+F G GG+ L++ + ++ E + + ++ N P + +F D + +
Sbjct: 1096 LDIFAGCGGLSHGLKKAGVS---DAKWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAI 1152
Query: 64 ---------------------------------IPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 1153 MEKGGDQDDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGFS 1202
>gi|145641419|ref|ZP_01796998.1| cytosine specific DNA methyltransferase (BSP6IM) [Haemophilus
influenzae R3021]
gi|145273962|gb|EDK13829.1| cytosine specific DNA methyltransferase (BSP6IM) [Haemophilus
influenzae 22.4-21]
Length = 298
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+EC SE++ KTY+ F ++L GD+ ++ + +PD D+++AGFPCQ FS G
Sbjct: 1 MECIAHSEVDLNPAKTYEIFFNDSLNLGDLTQLAPKSLPDFDLMIAGFPCQTFSIIG 57
>gi|302757657|ref|XP_002962252.1| hypothetical protein SELMODRAFT_76095 [Selaginella moellendorffii]
gi|300170911|gb|EFJ37512.1| hypothetical protein SELMODRAFT_76095 [Selaginella moellendorffii]
Length = 338
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 31/88 (35%), Gaps = 15/88 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
+++ LF GIGG + L + S E N + + + + + G +
Sbjct: 216 IRMLSLFSGIGGAEVALHRAGIKLKF--VVSVESNVDNRRILERWWSTSGQTGQHRILDD 273
Query: 61 ------------TQDIPDHDVLLAGFPC 76
++ D+++ G PC
Sbjct: 274 VQDLTMAVVARLMEESGGFDLVIGGSPC 301
>gi|257887107|ref|ZP_05666760.1| site-specific DNA-methyltransferase [Enterococcus faecium
1,141,733]
gi|257823161|gb|EEV50093.1| site-specific DNA-methyltransferase [Enterococcus faecium
1,141,733]
Length = 360
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 31/100 (31%), Gaps = 22/100 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---- 57
LK+ F G+G + L E E E ++ Y+ + I
Sbjct: 3 LKLFSFFSGLGLLDLGFE----KSGFEIVEVFEKKEEFLEMYKYSRKKMGIPLPKYGYSL 58
Query: 58 --------------KIKTQDIPDHDVLLAGFPCQPFSQAG 83
KI+++ + G PC FS AG
Sbjct: 59 ADVENLLDDKEFELKIESEKKEGLVGFIGGPPCPDFSIAG 98
>gi|192824258|ref|YP_001994899.1| gp82 [Mycobacterium phage Pukovnik]
gi|190610488|gb|ACE80008.1| gp82 [Mycobacterium phage Pukovnik]
Length = 228
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 11/80 (13%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M ++ DLFCG GG + + E +I + ++P GD +
Sbjct: 1 MPRLLDLFCGAGGAGMGYHRA----GFEVVG-VDI------AQRDSYPFEFHQGDALEFL 49
Query: 61 TQDIPDHDVLLAGFPCQPFS 80
+ D + A PCQ +S
Sbjct: 50 KAHGHEFDAIHASPPCQRYS 69
>gi|240280401|gb|EER43905.1| C-5 cytosine methyltransferase DmtA [Ajellomyces capsulatus H143]
Length = 651
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 24/83 (28%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
D FCG GG+ Q + + S+ S +
Sbjct: 324 YTFGDGFCGAGGVSRGALQAGLRLNWGFDHSVSA---MDSFRLNFETAIGYTSDVADFLA 380
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ D+L PCQ FS A
Sbjct: 381 SSHTEIMVDILHFSPPCQTFSPA 403
>gi|295666203|ref|XP_002793652.1| C-5 cytosine methyltransferase DmtA [Paracoccidioides brasiliensis
Pb01]
gi|226277946|gb|EEH33512.1| C-5 cytosine methyltransferase DmtA [Paracoccidioides brasiliensis
Pb01]
Length = 653
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 25/83 (30%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+ D FCG GG+ Q + + ++ S +
Sbjct: 327 YTLGDGFCGAGGVSRGALQAGLRLNWGFDHSVAA---MNSYRLNFETAIGYTSDVADFLA 383
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
D D+L PCQ FS A
Sbjct: 384 NNTDEIIIDILHFSPPCQTFSPA 406
>gi|225561042|gb|EEH09323.1| C-5 cytosine methyltransferase DmtA [Ajellomyces capsulatus G186AR]
Length = 650
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 24/83 (28%), Gaps = 5/83 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
D FCG GG+ Q + + S+ S +
Sbjct: 323 YTFGDGFCGAGGVSRGALQAGLRLNWGFDHSVSA---MDSFRLNFETAIGYTSDVADFLA 379
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ D+L PCQ FS A
Sbjct: 380 SSHTEIMVDILHFSPPCQTFSPA 402
>gi|119897062|ref|YP_932275.1| C-5 cytosine-specific DNA methylase [Azoarcus sp. BH72]
gi|119669475|emb|CAL93388.1| probable C-5 cytosine-specific DNA methylase [Azoarcus sp. BH72]
Length = 434
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 29/86 (33%), Gaps = 18/86 (20%)
Query: 13 GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ---------- 62
G+ L L++T E E T + N I ++ +
Sbjct: 2 GLDLGLDRTGR---YEIVACVEKEKVFCNTIRQNSAAGRINPNLKVFEGDINDLDPAQVL 58
Query: 63 -----DIPDHDVLLAGFPCQPFSQAG 83
+ D+L+ G PCQ FS AG
Sbjct: 59 DSVNLKPGEVDLLVGGPPCQSFSTAG 84
>gi|73948636|ref|XP_849220.1| PREDICTED: similar to DNA methyltransferase 3A isoform 1 [Canis
familiaris]
Length = 531
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ LF GI L L+ V+C+ +SE+ S+ + + + + +
Sbjct: 258 IRVLSLFDGIATGLLVLKDLGIQ--VDCYIASEVCKDSITVGKIMYVGDVC--SVTQKHI 313
Query: 62 QDIPDHDVLLAGFPCQPFSQ 81
Q+ D+++ G PC S
Sbjct: 314 QEWGPLDLVIGGSPCNGLSI 333
>gi|307826333|ref|ZP_07656539.1| C-5 cytosine-specific DNA methylase [Methylobacter tundripaludum
SV96]
gi|307732631|gb|EFO03502.1| C-5 cytosine-specific DNA methylase [Methylobacter tundripaludum
SV96]
Length = 247
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 24/83 (28%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+ + LF GIG + E R + F +I ++V
Sbjct: 1 MLVLSLFPGIGLLDRGFEDAGFCVVRGPDLIFGGDIRKFTVMP----------------- 43
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
D ++ G PCQ FS+A
Sbjct: 44 -----GKFDGVIGGPPCQDFSKA 61
>gi|74012244|ref|XP_850916.1| PREDICTED: similar to DNA methyltransferase 3A isoform 1 [Canis
familiaris]
Length = 531
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ LF GI L L+ V+C+ +SE+ S+ + + + + +
Sbjct: 258 IRVLSLFDGIATGLLVLKDLGIQ--VDCYIASEVCKDSITVGKIMYVGDVC--SVTQKHI 313
Query: 62 QDIPDHDVLLAGFPCQPFSQ 81
Q+ D+++ G PC S
Sbjct: 314 QEWGPLDLVIGGSPCNGLSI 333
>gi|308185228|ref|YP_003929361.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180]
gi|308061148|gb|ADO03044.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180]
Length = 368
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 35/125 (28%), Gaps = 44/125 (35%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-------NPYS-------------- 39
MLK+ +F GIG L++ E F+ + + +
Sbjct: 1 MLKVASVFSGIGAFEWALKRLDLE--HEILFACDNGNIDLKLDYDAELNKIKSLSSIKEK 58
Query: 40 --------------------VKTYQANFPNTLIFGDIAKIKTQDI-PDHDVLLAGFPCQP 78
N F DI + D D+L+ G PCQ
Sbjct: 59 KNYTNNLYKQHSRKTNFVKQSYLANYTIQNDCFFQDIKLLDGTDFTDKVDILVGGSPCQS 118
Query: 79 FSQAG 83
FS G
Sbjct: 119 FSSIG 123
>gi|154322765|ref|XP_001560697.1| hypothetical protein BC1G_00725 [Botryotinia fuckeliana B05.10]
gi|150848059|gb|EDN23252.1| hypothetical protein BC1G_00725 [Botryotinia fuckeliana B05.10]
Length = 861
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 9/84 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIK 60
D +CG GG+ ++ + + N ++ +T+Q NFP + +
Sbjct: 546 YTYGDGYCGAGGMTRGAATA----GLKVKWGFDFNAHAGETWQKNFPGATFHLLPVNEFA 601
Query: 61 TQDIPDH----DVLLAGFPCQPFS 80
P D+L PCQ FS
Sbjct: 602 ALPDPRKRLWIDILHLSPPCQVFS 625
>gi|291539767|emb|CBL12878.1| Site-specific DNA methylase [Roseburia intestinalis XB6B4]
Length = 337
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 29/111 (26%), Gaps = 32/111 (28%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-------------------NPYSVKT 42
K+ DLF G GG+ Q+ E + E +
Sbjct: 5 YKMIDLFAGCGGLEDGFLQSGK---YEDVAAVEWLKPQVNTLIKRLETKWKVKDAKERVM 61
Query: 43 YQANFPNTLIFGDIAKIKTQDIPDHDVLL----------AGFPCQPFSQAG 83
+ +F + D + G PCQ +S AG
Sbjct: 62 HFDIQREKELFEGWQDDEFGQGKGLDYFVNKVGGIDIIIGGPPCQAYSVAG 112
>gi|297739461|emb|CBI29643.3| unnamed protein product [Vitis vinifera]
Length = 460
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 32/110 (29%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59
D+F G GG+ L+Q ++ E + + + N P+ L+F + +
Sbjct: 28 LDVFAGCGGLSEGLQQAGVSL---TKWAIEYEEPAGEAFHLNHPDALMFINDCNVILRAI 84
Query: 60 -----------------------------KTQDIPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 85 MSACGDADDCVSTSEATELAEKLDEKDIRNLPRPGQVDFINGGPPCQGFS 134
>gi|227486883|ref|ZP_03917199.1| DNA restriction-modification system, DNA methylase
[Corynebacterium glucuronolyticum ATCC 51867]
gi|227541955|ref|ZP_03972004.1| DNA restriction-modification system DNA methylase
[Corynebacterium glucuronolyticum ATCC 51866]
gi|227092957|gb|EEI28269.1| DNA restriction-modification system, DNA methylase
[Corynebacterium glucuronolyticum ATCC 51867]
gi|227182398|gb|EEI63370.1| DNA restriction-modification system DNA methylase
[Corynebacterium glucuronolyticum ATCC 51866]
Length = 332
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Query: 23 NHRNVECFFSSEINPYSVK--TYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
E EI+ + + ++ D+ D+ G PC PFS
Sbjct: 25 ERAGFEHLAVVEIDSNACETLRLNRGEEWNIVEQDVHTFDGAPYKGVDLFAGGVPCPPFS 84
Query: 81 QAG 83
AG
Sbjct: 85 IAG 87
>gi|296199838|ref|XP_002747335.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 1
[Callithrix jacchus]
Length = 853
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 575 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 632
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 633 KKNIEEWGPFDLVIGGSPCNDLSN 656
>gi|5901940|ref|NP_008823.1| DNA (cytosine-5)-methyltransferase 3B isoform 1 [Homo sapiens]
gi|17375667|sp|Q9UBC3|DNM3B_HUMAN RecName: Full=DNA (cytosine-5)-methyltransferase 3B; Short=Dnmt3b;
AltName: Full=DNA methyltransferase HsaIIIB; Short=DNA
MTase HsaIIIB; Short=M.HsaIIIB
gi|5823168|gb|AAD53063.1|AF156488_1 DNA cytosine-5 methyltransferase 3 beta 1 [Homo sapiens]
gi|18033255|gb|AAL57040.1|AF331857_1 DNA cytosine methyltransferase 3 beta [Homo sapiens]
gi|5748521|emb|CAB53070.1| DNA (cytosine-5-)-methyltransferase 3 beta [Homo sapiens]
gi|108752172|gb|AAI11934.1| DNMT3B protein [synthetic construct]
gi|110645774|gb|AAI18503.1| DNMT3B protein [synthetic construct]
gi|119596758|gb|EAW76352.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_c [Homo
sapiens]
gi|119596760|gb|EAW76354.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_c [Homo
sapiens]
gi|261857548|dbj|BAI45296.1| DNA (cytosine-5-)-methyltransferase 3 beta [synthetic construct]
Length = 853
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 575 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 632
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 633 KKNIEEWGPFDLVIGGSPCNDLSN 656
>gi|110740122|dbj|BAF01962.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
Length = 603
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63
D+F G GG+ L++ + ++ E + + ++ N P + +F D + +
Sbjct: 165 LDIFAGCGGLSHGLKKAGVS---DAKWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAI 221
Query: 64 ---------------------------------IPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 222 MEKGGDQDDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGFS 271
>gi|332858342|ref|XP_514580.3| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 5 [Pan
troglodytes]
Length = 853
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 575 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 632
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 633 KKNIEEWGPFDLVIGGSPCNDLSN 656
>gi|161621506|gb|ABX75257.1| cytosine-5-methyltransferase [Malus x domestica]
Length = 107
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 15/88 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+ + LF GIGG + L + + S EI+ + + + T G + +
Sbjct: 22 INVLSLFTGIGGAEVALHRLGVPL--KNVISVEISEVNRNVVSSWWEQTNQRGRLQHVDD 79
Query: 60 -----------KTQDIPDHDVLLAGFPC 76
+ D+++ G PC
Sbjct: 80 VQQLNGDHLEQYMSEFGGFDLVIGGSPC 107
>gi|296199840|ref|XP_002747336.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 2
[Callithrix jacchus]
Length = 845
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 567 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 624
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 625 KKNIEEWGPFDLVIGGSPCNDLSN 648
>gi|233770214|gb|ACQ91180.1| DRM-type cytosine DNA-methyltransferase [Fragaria x ananassa]
gi|233770218|gb|ACQ91182.1| DRM-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 596
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+ + LF GIGG + L + ++ S EI+ S + + T G++ +
Sbjct: 471 INLLSLFSGIGGAEIALHRLGIR--MKNVVSVEISAVSRTVVRTWWEQTNQKGNLYHLAD 528
Query: 60 -----------KTQDIPDHDVLLAGFPCQPFSQAG 83
D+++ G PC AG
Sbjct: 529 VQELNADRLEHYINTFGGFDLVVGGSPCNN--LAG 561
>gi|332249027|ref|XP_003273664.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B [Nomascus
leucogenys]
Length = 868
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 590 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 647
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 648 KKNIEEWGPFDLVIGGSPCNDLSN 671
>gi|226330016|ref|ZP_03805534.1| hypothetical protein PROPEN_03929 [Proteus penneri ATCC 35198]
gi|225200811|gb|EEG83165.1| hypothetical protein PROPEN_03929 [Proteus penneri ATCC 35198]
Length = 325
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 33 SEINPYSVKTYQ-ANFPNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83
+EI+ ++ T + +I GD+A I + DVL GFPCQ FS AG
Sbjct: 3 NEIDKHACNTLRLNRPKWNVIEGDVAGIDFSEYKGKVDVLAGGFPCQAFSYAG 55
>gi|268602423|ref|ZP_06136590.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae
PID18]
gi|268586554|gb|EEZ51230.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae
PID18]
Length = 315
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 11/75 (14%)
Query: 16 LDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIKTQDIPDH------D 68
+ EQ + S E+ Y + L+ D+ + QD+ + D
Sbjct: 1 MGFEQA----GFQQLLSVEMESDYCQTYRTNFPRHQLLQKDLTTLTEQDLTNCLNGQSVD 56
Query: 69 VLLAGFPCQPFSQAG 83
+++ G PCQ FS AG
Sbjct: 57 LVIGGPPCQGFSMAG 71
>gi|297807559|ref|XP_002871663.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317500|gb|EFH47922.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 593
Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
+K+ LF GIGG + L + + S EI+ + ++ + T G + + K
Sbjct: 467 IKVLSLFTGIGGGEVALHRL--QIRMNVVVSVEISEANRNILRSFWEQTNQKGILREFKD 524
Query: 61 ------------TQDIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PC AG
Sbjct: 525 VEKLDDNTIEQLMDEYGGFDLVIGGSPCNN--LAG 557
>gi|317401191|gb|EFV81837.1| DNA-cytosine methyltransferase [Achromobacter xylosoxidans C54]
Length = 523
Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 32/133 (24%), Gaps = 53/133 (39%)
Query: 4 ITDLFCGIGGIRLDLE---QTFNHRNVECFFSSEINPYSVK---------TYQANFPNTL 51
+ DLF G GG+ S E +P + + +
Sbjct: 9 VIDLFAGPGGLCEGFSSVVDASGAAGFAVNISIEKDPVAHRTLLLRAIFRKFPKGQVPDC 68
Query: 52 IFGDIAKIKTQDIPDHD-----------------------------------------VL 70
+ + +++ D VL
Sbjct: 69 YYDYVRGKISREQFLCDPDIRVAAKDAAKEARHAELGVTPPEAVDAWIREALGGRTDWVL 128
Query: 71 LAGFPCQPFSQAG 83
+ G PCQ +S AG
Sbjct: 129 IGGPPCQAYSLAG 141
>gi|155370987|ref|YP_001426521.1| hypothetical protein ATCV1_Z040R [Acanthocystis turfacea
Chlorella virus 1]
gi|155124307|gb|ABT16174.1| hypothetical protein ATCV1_Z040R [Acanthocystis turfacea
Chlorella virus 1]
Length = 349
Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 6/75 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K +LF G+GGI L V+ E + + A T
Sbjct: 1 MKALELFAGVGGITHGLRGY-----VKPVAFVEYEKDAAEFLAARGKPVHGDVK-EFDAT 54
Query: 62 QDIPDHDVLLAGFPC 76
+ + D++ AG+PC
Sbjct: 55 EYRGNIDIVTAGWPC 69
>gi|297260031|ref|XP_001107440.2| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 3 [Macaca
mulatta]
Length = 823
Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 545 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 602
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 603 KKNIEEWGPFDLVIGGSPCNDLSN 626
>gi|256383694|gb|ACU78264.1| CCTTC-recognizing Type II restriction modification system
(MmyCII) adenine/cytosine DNA methyltransferase subunit
[Mycoplasma mycoides subsp. capri str. GM12]
gi|256384525|gb|ACU79094.1| CCTTC-recognizing Type II restriction modification system
(MmyCII) adenine/cytosine DNA methyltransferase subunit
[Mycoplasma mycoides subsp. capri str. GM12]
gi|296455594|gb|ADH21829.1| CCTTC-recognizing Type II restriction modification system
(MmyCII) adenine/cytosine DNA methyltransferase subunit
[synthetic Mycoplasma mycoides JCVI-syn1.0]
Length = 834
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 27/97 (27%), Gaps = 21/97 (21%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI---------- 52
LF G N EC ++E+ + + N
Sbjct: 7 TYISLFSSAGVGCYGF----KLENFECIATNELLERRLNIQKLNNKCKYDSGYIKGDITL 62
Query: 53 -------FGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ +I K DV++A PCQ S A
Sbjct: 63 KETKDLIYNEINLWKQLGNDKVDVIIATPPCQGMSVA 99
>gi|134288503|ref|YP_001110666.1| C-5 cytosine-specific DNA methylase [Burkholderia vietnamiensis G4]
gi|134133153|gb|ABO59863.1| C-5 cytosine-specific DNA methylase [Burkholderia vietnamiensis G4]
Length = 586
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 5/82 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I DLF G GG+ +E + + + D+ ++ ++
Sbjct: 28 IIDLFSGGGGMSTAIEWALGRSP--HIAVNHSDDALSMHRANHPQTKHFIADVREVCPKE 85
Query: 64 I---PDHDVLLAGFPCQPFSQA 82
+ +L A C SQA
Sbjct: 86 VTEGRPVGLLHASPDCTHHSQA 107
>gi|156363806|ref|XP_001626231.1| predicted protein [Nematostella vectensis]
gi|156213100|gb|EDO34131.1| predicted protein [Nematostella vectensis]
Length = 623
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L + + ++S+EI+ +++ + N + + D+
Sbjct: 337 IRVLALFDGIATGLQALNELGIVS--DKYYSAEIDEQAIQVTKVNHGDRITHLGDIKDLT 394
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82
+ + +++ D+++ G PCQ S A
Sbjct: 395 ESQIRELGPFDLVIGGSPCQDLSIA 419
>gi|194224302|ref|XP_001916549.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 3 beta [Equus
caballus]
Length = 774
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV------KTYQANFPNTLIFGD 55
+++ LF GI L L++ +SE+ S+ Q + + D
Sbjct: 558 IRVLSLFDGIATGYLVLKELGIKVKY---VASEVCEESIAVGSLKHERQLSKXCXMTSRD 614
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQ 81
I K ++ D+++ G PC S
Sbjct: 615 ITKRNIEEWGPFDLVIGGSPCNDLSN 640
>gi|28559065|ref|NP_787046.1| DNA (cytosine-5)-methyltransferase 3B isoform 6 [Homo sapiens]
gi|6118092|gb|AAF04015.1|AF176228_1 DNA cytosine-5 methyltransferase 3B [Homo sapiens]
gi|119596762|gb|EAW76356.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_e [Homo
sapiens]
gi|123231673|emb|CAM27373.1| DNA (cytosine-5-)-methyltransferase 3 beta [Homo sapiens]
Length = 845
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 567 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 624
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 625 KKNIEEWGPFDLVIGGSPCNDLSN 648
>gi|119596756|gb|EAW76350.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_a [Homo
sapiens]
Length = 812
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 575 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 632
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 633 KKNIEEWGPFDLVIGGSPCNDLSN 656
>gi|221067872|ref|ZP_03543977.1| Site-specific DNA methylase-like protein [Comamonas testosteroni
KF-1]
gi|220712895|gb|EED68263.1| Site-specific DNA methylase-like protein [Comamonas testosteroni
KF-1]
Length = 193
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
+ DLF G GG +EQ + +P +V + AN P T F ++ +
Sbjct: 15 VVDLFAGGGGASTGIEQA---IGRHVDIAVNHDPEAVSLHTANHPPTRHFCSDVFEVDPL 71
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
D +L A C+ FS+A
Sbjct: 72 AVTDGQPVGLLWASPDCKHFSKA 94
>gi|316977147|gb|EFV60295.1| putative type II DNA modification methyltransferase [Trichinella
spiralis]
Length = 298
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 12/84 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP-NTLIFGDIAKIKT 61
+I +LF GIGG + + +I+ TY ANF + +I +
Sbjct: 8 RILELFAGIGG---------SKVKYVPVGAYDIDETCNSTYVANFGGDIFRRRNICSLTW 58
Query: 62 Q--DIPDHDVLLAGFPCQPFSQAG 83
D D + PCQPF +G
Sbjct: 59 NELDQLQSDFWMLSPPCQPFMLSG 82
>gi|254523796|ref|ZP_05135851.1| modification methylase [Stenotrophomonas sp. SKA14]
gi|219721387|gb|EED39912.1| modification methylase [Stenotrophomonas sp. SKA14]
Length = 644
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLF G GG L+Q ++ + + ++ + AN P T +
Sbjct: 13 VVDLFAGGGGASEGLKQA---LGIDPALAYNHDELAIGMHAANHPLTQHHREDIWHADPR 69
Query: 64 I----PDHDVLLAGFPCQPFSQA 82
+ A C FSQA
Sbjct: 70 VDVAGRPIGWFHASPDCTHFSQA 92
>gi|28559061|ref|NP_787044.1| DNA (cytosine-5)-methyltransferase 3B isoform 2 [Homo sapiens]
gi|5748522|emb|CAB53071.1| DNA (cytosine-5-)-methyltransferase 3 beta [Homo sapiens]
gi|119596761|gb|EAW76355.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_d [Homo
sapiens]
Length = 833
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 612
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 613 KKNIEEWGPFDLVIGGSPCNDLSN 636
>gi|291388724|ref|XP_002710852.1| PREDICTED: DNA cytosine-5 methyltransferase 3 beta isoform 2
[Oryctolagus cuniculus]
Length = 859
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ N +I
Sbjct: 581 IRVLSLFDGIATGYLVLKELG--IKVEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 638
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K + D+++ G PC S
Sbjct: 639 KKNIDEWGPFDLVIGGSPCNDLSN 662
>gi|318057150|ref|ZP_07975873.1| putative 5-methylcytosine methyltransferase [Streptomyces sp.
SA3_actG]
gi|318076182|ref|ZP_07983514.1| putative 5-methylcytosine methyltransferase [Streptomyces sp.
SA3_actF]
Length = 324
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAK 58
DL G+GG L LEQ + +++ S T +AN P + +I
Sbjct: 5 TAIDLCAGVGGQALGLEQA----GFRIAAAVDVDVDSCATLRANRPEWQVIRGDLKEIEP 60
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
++ + D+L G P P++ G
Sbjct: 61 VEYDCLDGADLLSCGLPRSPYTIGG 85
>gi|302656192|ref|XP_003019852.1| hypothetical protein TRV_06140 [Trichophyton verrucosum HKI 0517]
gi|291183624|gb|EFE39228.1| hypothetical protein TRV_06140 [Trichophyton verrucosum HKI 0517]
Length = 1085
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 18/96 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------N 49
L +LF G G LE+ +E ++ E + + TY+AN P N
Sbjct: 632 LNALNLFSGGGTFDRGLEEGGA---IESKWAVEWGLHQMLTYRANHPDGNGLKLFCGSVN 688
Query: 50 TLIFGDIA---KIKTQDIPDHDVLLAGFPCQPFSQA 82
+F I I I D + AG PCQ +S A
Sbjct: 689 DYLFQAITGKENIYVARIGDAHFISAGSPCQGYSSA 724
>gi|332858344|ref|XP_003316964.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 1 [Pan
troglodytes]
Length = 833
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 612
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 613 KKNIEEWGPFDLVIGGSPCNDLSN 636
>gi|301765808|ref|XP_002918317.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 3
[Ailuropoda melanoleuca]
Length = 848
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ N +I
Sbjct: 570 IRVLSLFDGIATGYLVLKELG--IKVEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 627
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 628 KRNIEEWGPFDLVIGGSPCNDLSN 651
>gi|301765806|ref|XP_002918316.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 2
[Ailuropoda melanoleuca]
Length = 856
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ N +I
Sbjct: 578 IRVLSLFDGIATGYLVLKELG--IKVEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 635
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 636 KRNIEEWGPFDLVIGGSPCNDLSN 659
>gi|301765804|ref|XP_002918315.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 1
[Ailuropoda melanoleuca]
Length = 848
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ N +I
Sbjct: 570 IRVLSLFDGIATGYLVLKELG--IKVEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 627
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 628 KRNIEEWGPFDLVIGGSPCNDLSN 651
>gi|284054995|ref|ZP_06385205.1| DNA-cytosine methyltransferase [Arthrospira platensis str.
Paraca]
Length = 74
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54
DLF G GG+ LE EC + + +++T+Q N P
Sbjct: 8 TFIDLFSGAGGMSCGLEMA----GFECLLGVDFDKSAIQTFQNNHPQAETIC 55
>gi|281339306|gb|EFB14890.1| hypothetical protein PANDA_006761 [Ailuropoda melanoleuca]
Length = 854
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ N +I
Sbjct: 576 IRVLSLFDGIATGYLVLKELG--IKVEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 633
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 634 KRNIEEWGPFDLVIGGSPCNDLSN 657
>gi|241758593|ref|ZP_04756708.1| site-specific DNA-methyltransferase [Neisseria flavescens SK114]
gi|241321245|gb|EER57417.1| site-specific DNA-methyltransferase [Neisseria flavescens SK114]
Length = 364
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 31/102 (30%), Gaps = 26/102 (25%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI---- 59
I F G G + L E + E F +E++P ++ Y+ + I
Sbjct: 2 IFSFFSGSGFLDLGFELS----GFEIAFVNEVHPPFLEAYKYSRSKMGIPKPKYGYFEGS 57
Query: 60 ---KTQDIPDHDV---------------LLAGFPCQPFSQAG 83
D+ + G PC FS AG
Sbjct: 58 IDECLDMEKARDLSSWVKKEKQDGVIVGFIGGPPCPDFSVAG 99
>gi|255280097|ref|ZP_05344652.1| site-specific DNA methylase [Bryantella formatexigens DSM 14469]
gi|255269188|gb|EET62393.1| site-specific DNA methylase [Bryantella formatexigens DSM 14469]
Length = 351
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI----FGDIAKI 59
I DLF G GG +E + + +P +++ ++ N P TL +
Sbjct: 6 IIDLFAGGGGASTGIEMA---LGRHVDIAVDHDPEAIRIHKTNHPGTLHLTEDVFRVNLQ 62
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ ++ A C FS+A
Sbjct: 63 EYVKGRHVALMWASPDCTQFSRA 85
>gi|74012646|ref|XP_853590.1| PREDICTED: similar to DNA methyltransferase 3A isoform 1 [Canis
familiaris]
Length = 531
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ LF GI L L+ V+C+ +SE+ S+ + + + + +
Sbjct: 258 IRVLSLFDGIATGLLVLKDLGIQ--VDCYIASEVCKDSITVGKIMYVGDVC--SVTQKHI 313
Query: 62 QDIPDHDVLLAGFPCQPFSQ 81
Q+ D+++ G PC S
Sbjct: 314 QEWGPLDLVIGGSPCNGLSI 333
>gi|73948652|ref|XP_849522.1| PREDICTED: similar to DNA methyltransferase 3A isoform 1 [Canis
familiaris]
Length = 327
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ LF GI L L+ V+C+ +SE+ S+ + + + + +
Sbjct: 144 IRVLSLFDGIATGLLVLKDLGIQ--VDCYIASEVCKDSITVGKIMYVGDVC--SVTQKHI 199
Query: 62 QDIPDHDVLLAGFPCQPFSQ 81
Q+ D+++ G PC S
Sbjct: 200 QEWGPLDLVIGGSPCNGLSI 219
>gi|333024772|ref|ZP_08452836.1| putative 5-methylcytosine methyltransferase [Streptomyces sp.
Tu6071]
gi|332744624|gb|EGJ75065.1| putative 5-methylcytosine methyltransferase [Streptomyces sp.
Tu6071]
Length = 324
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAK 58
DL G+GG L LEQ + +++ S T +AN P + +I
Sbjct: 5 TAIDLCAGVGGQALGLEQA----GFRIAAAVDVDVDSCATLRANRPEWQVIRGDLKEIEP 60
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
++ + D+L G P P++ G
Sbjct: 61 VEYDCLDGADLLSCGLPRSPYTIGG 85
>gi|321310707|ref|YP_004193036.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str.
Langford 1]
gi|319802551|emb|CBY93197.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str.
Langford 1]
Length = 340
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 9/70 (12%)
Query: 23 NHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQD--------IPDHDVLLAG 73
E EI+ + T + N P+ + DI + +D + D++ G
Sbjct: 23 EQAGFEHLALIEIDEDASNTLRKNKPHWNVLCEDIKNVAERDLEKEFGIKKGELDLISGG 82
Query: 74 FPCQPFSQAG 83
PCQ FS AG
Sbjct: 83 APCQNFSYAG 92
>gi|29467228|dbj|BAC67060.1| DNA methyltransferase [Nicotiana tabacum]
Length = 608
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + L + S E + + ++ + T G++
Sbjct: 482 INVLSLFSGIGGGEVALYRLGIPL--NTVVSVEKSEVNRDIVRSWWEQTNQRGNLIHFND 539
Query: 62 QD-------------IPDHDVLLAGFPCQPFSQAG 83
D+++ G PC AG
Sbjct: 540 VQQLNGDRLEQLIESFGGFDLVIGGSPCNN--LAG 572
>gi|291388726|ref|XP_002710853.1| PREDICTED: DNA cytosine-5 methyltransferase 3 beta isoform 3
[Oryctolagus cuniculus]
Length = 796
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ N +I
Sbjct: 581 IRVLSLFDGIATGYLVLKELG--IKVEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 638
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K + D+++ G PC S
Sbjct: 639 KKNIDEWGPFDLVIGGSPCNDLSN 662
>gi|159461698|gb|ABW96888.1| MET1-type DNA-methyltransferase [Elaeis guineensis]
Length = 1543
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 34/110 (30%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59
D+F G GG+ L+Q+ ++ E + + + N P TL+F D +
Sbjct: 1108 LDIFAGCGGLSAGLQQSGVSF---TKWAIEYEQPAGEAFSENHPETLMFIDNCNVILRAI 1164
Query: 60 -----------------------------KTQDIPDHDVLLAGFPCQPFS 80
+ D + G PCQ FS
Sbjct: 1165 MEKCGDADDCVATDEAVKLATGLDEEKLKNLPMPGEVDFINGGPPCQGFS 1214
>gi|158339590|ref|YP_001520979.1| C-5 cytosine-specific DNA methylase [Acaryochloris marina
MBIC11017]
gi|158309831|gb|ABW31447.1| C-5 cytosine-specific DNA methylase [Acaryochloris marina
MBIC11017]
Length = 277
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 30/137 (21%), Gaps = 62/137 (45%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSS------------------------------- 33
DLFCG GG L + + +
Sbjct: 40 IDLFCGCGGFSLGM----IEGGFQVVAAVEKDANAALTYLANLGAYPLDMNFVVDEDEAR 95
Query: 34 -----------EINPYSVKTYQANFPNTLIFGDIAKIKTQDI----------------PD 66
+ + + + + + D+ +
Sbjct: 96 FTKLLEKIMQMDKDGGIAQCFLSGQHRPPERPGVEHFWLGDVRQLTGQQILDSIGVGVGE 155
Query: 67 HDVLLAGFPCQPFSQAG 83
D + G PCQ FS AG
Sbjct: 156 VDCVFGGPPCQGFSIAG 172
>gi|188581976|ref|YP_001925421.1| C-5 cytosine-specific DNA methylase [Methylobacterium populi BJ001]
gi|179345474|gb|ACB80886.1| C-5 cytosine-specific DNA methylase [Methylobacterium populi BJ001]
Length = 668
Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 5/84 (5%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DL CG GG ++ +E + + + DIA ++
Sbjct: 20 VADLLCGAGGSSTGCQRALAELGLEMELVCVNHWPVAIATHERNHPAARHYVQDIATVRP 79
Query: 62 Q---DIPDHDVLLAGFPCQPFSQA 82
D+L+A C S A
Sbjct: 80 HLLVPEGYLDLLMASPTCTHHSVA 103
>gi|301765810|ref|XP_002918318.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 4
[Ailuropoda melanoleuca]
Length = 773
Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ N +I
Sbjct: 558 IRVLSLFDGIATGYLVLKELG--IKVEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 615
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 616 KRNIEEWGPFDLVIGGSPCNDLSN 639
>gi|169977306|emb|CAQ18900.1| DNA (cytosine-5) methyltransferase [Nicotiana sylvestris]
Length = 1558
Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 32/110 (29%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63
D+F G GG+ L+++ + ++ E + ++ N P +F + +
Sbjct: 1123 LDIFAGCGGLSEGLQRSGVS---DTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVFLRVV 1179
Query: 64 ---------------------------------IPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 1180 MQKCGDAEDCISTPEASELAAAMDESELNSLPLPGQVDFINGGPPCQGFS 1229
>gi|169977330|emb|CAQ18912.1| domains rearranged methyltransferase [Nicotiana sylvestris]
gi|169977332|emb|CAQ18913.1| domains rearranged methyltransferase [Nicotiana sylvestris]
gi|169977334|emb|CAQ18914.1| domains rearranged methyltransferase [Nicotiana sylvestris]
gi|169977336|emb|CAQ18915.1| domains rearranged methyltransferase [Nicotiana sylvestris]
Length = 608
Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + L + S E + + ++ + T G++
Sbjct: 482 INVLSLFSGIGGGEVALYRLGIPL--NTVVSVEKSEVNRDIVRSWWEQTNQKGNLIHFND 539
Query: 62 QD-------------IPDHDVLLAGFPCQPFSQAG 83
D+++ G PC AG
Sbjct: 540 VQQLNGDRLEQLIESFGGFDLVIGGSPCNN--LAG 572
>gi|158320926|ref|YP_001513433.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs]
gi|158141125|gb|ABW19437.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs]
Length = 423
Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL 51
+ DLF G GG+ + E E++ + KT +
Sbjct: 4 INFLDLFAGAGGLSEGFLRA----GFEPVAHIELDANACKTLKTRSIYHY 49
>gi|225375639|ref|ZP_03752860.1| hypothetical protein ROSEINA2194_01264 [Roseburia inulinivorans
DSM 16841]
gi|225212496|gb|EEG94850.1| hypothetical protein ROSEINA2194_01264 [Roseburia inulinivorans
DSM 16841]
Length = 211
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 9/81 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ +LF G I E + FS E + N + DI ++
Sbjct: 1 MKVLELFAGTRSIGKAFESRGHE-----VFSVEWSKDFENIDLYEDINKVTAEDIIRLF- 54
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
DV+ A C FS A
Sbjct: 55 ---GKPDVIWASPDCSTFSIA 72
>gi|296108892|ref|YP_003615841.1| DNA-cytosine methyltransferase [Methanocaldococcus infernus ME]
gi|295433706|gb|ADG12877.1| DNA-cytosine methyltransferase [Methanocaldococcus infernus ME]
Length = 361
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 4/42 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY 43
+ + DLF G GG E + E+N + +Y
Sbjct: 1 MNLIDLFSGCGGFSRGFS----ELGFEPLLAIELNEDAAFSY 38
>gi|31074163|gb|AAP20552.1| DNA cytosine-5 methyltransferase 3b isoform 1 [Bos taurus]
Length = 826
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ N +I
Sbjct: 566 IRVLSLFDGIATGYLVLKELG--IKVEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 623
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 624 KKNIEEWGPFDLVIGGSPCNDLSN 647
>gi|269114810|ref|YP_003302573.1| Cytosine-specific DNA methyltransferase/Type II site-specific
deoxyribonuclease [Mycoplasma hominis]
gi|268322435|emb|CAX37170.1| Cytosine-specific DNA methyltransferase/Type II site-specific
deoxyribonuclease [Mycoplasma hominis ATCC 23114]
Length = 553
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 32/91 (35%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKI- 59
+K +LF L E E N + T + N PN + DI K+
Sbjct: 1 MKSIELF----AGAGGLALGLEMAGFEHIGLVEFNKSAADTLKVNRPNWNVLCEDIEKVA 56
Query: 60 -------KTQDIPDHDVLLAGFPCQPFSQAG 83
+ D+L G PCQ FS AG
Sbjct: 57 ARDLKKEFNIEKGSLDLLSGGAPCQSFSYAG 87
>gi|227431295|ref|ZP_03913348.1| DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227352888|gb|EEJ43061.1| DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 353
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 34/93 (36%), Gaps = 16/93 (17%)
Query: 1 MLKITDLFC--GIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIA 57
++K LF GIG E +++ V+ ++E+ P + + GDI
Sbjct: 4 IMKAMSLFSSAGIG------ELNIHNKGVDIVAANELLPKRADTYRFFYPETKMFQGDIT 57
Query: 58 -------KIKTQDIPDHDVLLAGFPCQPFSQAG 83
I+ LLA PCQ S G
Sbjct: 58 DENLKTEMIEFARQQKVRFLLATPPCQGLSSIG 90
>gi|126667824|ref|ZP_01738791.1| C-5 cytosine-specific DNA methylase [Marinobacter sp. ELB17]
gi|126627772|gb|EAZ98402.1| C-5 cytosine-specific DNA methylase [Marinobacter sp. ELB17]
Length = 327
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 27/90 (30%), Gaps = 8/90 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYS------VKTYQANFPNTLIF 53
L + F G G + L F ++ + EI + + ++
Sbjct: 53 LNVVSAFSGAGVMDRALHDGFQSAGIKLRTMLTIEIEGKYVDASLKANPELFDRNSVIVN 112
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I DV AG PC S AG
Sbjct: 113 TPIQDTCITGTAYSDVFWAGIPCLGSSLAG 142
>gi|68655485|emb|CAJ01711.1| putative cytosine methyltransferase [Hordeum vulgare subsp.
vulgare]
Length = 377
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 16/93 (17%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK---- 58
+ LF GIGG + L + H + S EI + + + + T I
Sbjct: 255 NVLSLFTGIGGGEVALHRLGIH--MRTVVSVEIGEVNRRILRGWWDQTQTGTLIEIADVK 312
Query: 59 --------IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PC AG
Sbjct: 313 SLTNDRIATFVRRFGGFDLVIGGSPCNN--LAG 343
>gi|297706862|ref|XP_002830246.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like, partial
[Pongo abelii]
Length = 751
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 473 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 530
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 531 KKNIEEWGPFDLVIGGSPCNDLSN 554
>gi|296481021|gb|DAA23136.1| DNA (cytosine-5-)-methyltransferase 3 beta [Bos taurus]
Length = 842
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ N +I
Sbjct: 566 IRVLSLFDGIATGYLVLKELG--IKVEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 623
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 624 KKNIEEWGPFDLVIGGSPCNDLSN 647
>gi|117307345|dbj|BAF36443.1| DNA methyltransferase type 1 [Nicotiana tabacum]
Length = 1558
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 28/110 (25%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKIK 60
D+F G GG+ L+++ + ++ E + + I +
Sbjct: 1123 LDIFAGCGGLSEGLQRSGVS---DTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVILRAV 1179
Query: 61 TQDI------------------------------PDHDVLLAGFPCQPFS 80
Q D + G PCQ FS
Sbjct: 1180 MQKCGDAEDCISTSEASELAAAMDENELNSLPLPGQVDFINGGPPCQGFS 1229
>gi|7288140|dbj|BAA92852.1| DNA (cytosine-5-)-methyltransferase [Nicotiana tabacum]
gi|56130955|gb|AAV80209.1| cytosine-5-methyltransferase [Nicotiana tabacum]
Length = 1556
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 28/110 (25%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKIK 60
D+F G GG+ L+++ + ++ E + + I +
Sbjct: 1121 LDIFAGCGGLSEGLQRSGVS---DTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVILRAV 1177
Query: 61 TQDI------------------------------PDHDVLLAGFPCQPFS 80
Q D + G PCQ FS
Sbjct: 1178 MQKCGDAENCISTSEASELAAAMDENELNSLPLPGQVDFINGGPPCQGFS 1227
>gi|293418093|ref|ZP_06660714.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185]
gi|291430224|gb|EFF03223.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185]
Length = 363
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 27/100 (27%), Gaps = 25/100 (25%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP--------YSVKTYQANFPNTLIFGDI 56
F G G + L E + F +E + +K GDI
Sbjct: 7 FSFFSGSGFLDLGFEHS----GFNVGFVNEFHEAFLNAYKHSRIKMKIKEPYYGYHNGDI 62
Query: 57 AKIKTQDIPDHDV-------------LLAGFPCQPFSQAG 83
+ + D + + G PC FS G
Sbjct: 63 RDLISGDGCIELLHKVNEAKGESLVGFIGGPPCPDFSVGG 102
>gi|2887280|emb|CAA05207.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum]
Length = 1559
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 28/113 (24%), Gaps = 37/113 (32%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
L D+F G GG+ L+ + + ++ E + + I
Sbjct: 1121 LSTLDIFAGCGGLSEGLQHSGVT---DTNWAIEYEAPAGDAFRLNHPKTKVFIHNCNVIL 1177
Query: 58 KIKTQDI------------------------------PDHDVLLAGFPCQPFS 80
+ Q D + G PCQ FS
Sbjct: 1178 RAVMQKCGDSDDCISTPEASELAAAMDESELNSLPLPGQVDFINGGPPCQGFS 1230
>gi|225463167|ref|XP_002267200.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 1549
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59
D+F G GG+ L+Q+ ++ E + ++ N P +L+F + +
Sbjct: 1114 LDIFAGCGGLSEGLQQSGVSV---TKWAIEYEEPAGDAFKLNHPESLMFINNCNVILRAV 1170
Query: 60 -----------------------------KTQDIPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 1171 MEKCGDDDDCISTSEAAELAAALGEKDINNLPLPGQVDFINGGPPCQGFS 1220
>gi|170084905|ref|XP_001873676.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651228|gb|EDR15468.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 330
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA--KIK 60
+ + +CGIGG+ L ++ + + + + + Y+AN N + DI+
Sbjct: 4 RALEFYCGIGGLHFALSRS--SLGGTVVRAFDWDQCACRVYKANHSNIVTNVDISTLVAA 61
Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81
D+ L CQP++
Sbjct: 62 DLAALKADLWLLSPACQPYTI 82
>gi|326441740|ref|ZP_08216474.1| C-5 cytosine-specific DNA methylase [Streptomyces clavuligerus
ATCC 27064]
Length = 187
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I L G GG+ L ++ + + ++ P + + ++P GDI+ + D
Sbjct: 13 IGSLCSGYGGLDLGVQ---SVLGGRMAWHADTAPGASRILARHWPGVPNLGDISVVSWAD 69
Query: 64 IPDHDVLLAGFPCQ 77
+ VL AGFPCQ
Sbjct: 70 VQGVCVLTAGFPCQ 83
>gi|296199842|ref|XP_002747337.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 3
[Callithrix jacchus]
Length = 770
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 612
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 613 KKNIEEWGPFDLVIGGSPCNDLSN 636
>gi|212720705|ref|NP_001131171.1| hypothetical protein LOC100192479 [Zea mays]
gi|194690774|gb|ACF79471.1| unknown [Zea mays]
Length = 609
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 16/94 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+ + LF GIGG + L + + S E + + ++ + T I
Sbjct: 486 MNVLSLFTGIGGAEVALHRLGIR--MNTVVSVEKSEVNRTILKSWWDQTQTGTLIEINDV 543
Query: 60 ----------KTQDIPDHDVLLAGFPCQPFSQAG 83
+ I D+++ G PC AG
Sbjct: 544 QTLTADRIEAYIRRIGGFDLVIGGSPCNN--LAG 575
>gi|296084836|emb|CBI27718.3| unnamed protein product [Vitis vinifera]
Length = 1429
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59
D+F G GG+ L+Q+ ++ E + ++ N P +L+F + +
Sbjct: 994 LDIFAGCGGLSEGLQQSGVSV---TKWAIEYEEPAGDAFKLNHPESLMFINNCNVILRAV 1050
Query: 60 -----------------------------KTQDIPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 1051 MEKCGDDDDCISTSEAAELAAALGEKDINNLPLPGQVDFINGGPPCQGFS 1100
>gi|307354298|ref|YP_003895349.1| DNA-cytosine methyltransferase [Methanoplanus petrolearius DSM
11571]
gi|307157531|gb|ADN36911.1| DNA-cytosine methyltransferase [Methanoplanus petrolearius DSM
11571]
Length = 421
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 33/130 (25%), Gaps = 54/130 (41%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK-------------------TYQ 44
+ D+F G GG+ + E N + Y
Sbjct: 7 VLDMFAGAGGLTEGF----FRNDFNIVTHIEKNTTACHTLATRAFYHSLAKKDRQDIYYD 62
Query: 45 ANFPNTLIFGDIAKIKTQDIPDH-------------------------------DVLLAG 73
N I + K+ DIPD DV++ G
Sbjct: 63 YYDQNLTREEFIEECKSLDIPDPGVFNCELSPERENSIKKMVGGRLEEAGRKDVDVIIGG 122
Query: 74 FPCQPFSQAG 83
PCQ +S G
Sbjct: 123 PPCQAYSVIG 132
>gi|302497567|ref|XP_003010784.1| hypothetical protein ARB_03486 [Arthroderma benhamiae CBS 112371]
gi|291174327|gb|EFE30144.1| hypothetical protein ARB_03486 [Arthroderma benhamiae CBS 112371]
Length = 1085
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 18/96 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49
L +LF G G LE+ +E ++ E + + TY+AN PN
Sbjct: 632 LNALNLFSGGGTFDRGLEEGGA---IESKWAVEWGLHQMLTYRANHPNGKGLKLFCGSVN 688
Query: 50 TLIFGDIA---KIKTQDIPDHDVLLAGFPCQPFSQA 82
+F I I I + + AG PCQ +S A
Sbjct: 689 DYLFQAITGKENIYVARIGEAHFISAGSPCQGYSSA 724
>gi|164448558|ref|NP_861529.2| DNA (cytosine-5)-methyltransferase 3B [Bos taurus]
Length = 844
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ N +I
Sbjct: 566 IRVLSLFDGIATGYLVLKELG--IKVEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 623
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 624 KKNIEEWGPFDLVIGGSPCNDLSN 647
>gi|325136051|gb|EGC58661.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579]
gi|325202478|gb|ADY97932.1| DNA-cytosine methyltransferase [Neisseria meningitidis
M01-240149]
Length = 351
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 11/85 (12%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDI------AK 58
LF G E ++ ++ ++E+ P + + +I GDI
Sbjct: 5 SLFSSAG----IAETYLHNAGIKIIAANELVPERANLYKALYPESKMIIGDILHEEVFQN 60
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D L+A PCQ S AG
Sbjct: 61 LIQSVPNRLDFLIASPPCQGMSVAG 85
>gi|225463169|ref|XP_002267284.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 1535
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 32/110 (29%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59
D+F G GG+ L+Q+ ++ E + ++ N P + +F + +
Sbjct: 1100 LDIFAGCGGLSEGLQQSGVSV---TKWAIEYEEPAGDAFKLNHPESSMFINNCNVILRAV 1156
Query: 60 -----------------------------KTQDIPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 1157 MEKCGDADDCLSTSEAAELATSLGEKDINNLPLPGQVDFINGGPPCQGFS 1206
>gi|297563163|ref|YP_003682137.1| DNA-cytosine methyltransferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847611|gb|ADH69631.1| DNA-cytosine methyltransferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 387
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 9/82 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
+ + F GIG R+ LE + +S++ Y+ +F +T + DI K+
Sbjct: 14 VLEFFAGIGLARIGLEAA----GLRVSWSNDYETSKKNMYEGHFGTSSDHTYVLRDIRKV 69
Query: 60 KTQDIPD-HDVLLAGFPCQPFS 80
+P V A PC S
Sbjct: 70 YADQLPAGASVAWASSPCTDLS 91
>gi|227431296|ref|ZP_03913349.1| DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227352889|gb|EEJ43062.1| DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 367
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 20/94 (21%)
Query: 2 LKITDLF--CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+ LF GIG E + V ++E+ P + I I
Sbjct: 6 MNGMSLFASSGIG------EYYLDRAGVNVVVANELIPK--RGELYRKIYPHHKMVIGDI 57
Query: 60 KTQD----------IPDHDVLLAGFPCQPFSQAG 83
++ + D ++A PCQ S AG
Sbjct: 58 LDENVFSEISRTAIENNVDFMIASPPCQGISVAG 91
>gi|257413708|ref|ZP_04743935.2| conserved hypothetical protein [Roseburia intestinalis L1-82]
gi|257202598|gb|EEV00883.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
Length = 212
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ +LF G I EQ + FS E + + + DI K+
Sbjct: 1 MKVLELFAGTRSIGKAFEQRGHE-----VFSVEWSKDFENIDLYEDISKVTAEDILKLF- 54
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
DV+ A C FS A
Sbjct: 55 ---GKPDVIWASPDCATFSIA 72
>gi|320031459|gb|EFW13422.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 1040
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 18/96 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ +LFCG G LE + ++ E + + TY+AN N
Sbjct: 532 LRALNLFCGGGTFDRGLE---EGTAIRSEWAVEWDLPPMLTYRANHTNPEDVKLFRGSVD 588
Query: 62 Q---------------DIPDHDVLLAGFPCQPFSQA 82
+ + + AG PCQ +S A
Sbjct: 589 DFLAVAIRGQGSDLVAKLGQVEFISAGSPCQGYSLA 624
>gi|303310981|ref|XP_003065502.1| DNA (cytosine-5)-methyltransferase, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240105164|gb|EER23357.1| DNA (cytosine-5)-methyltransferase, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1117
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 18/96 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ +LFCG G LE + ++ E + + TY+AN N
Sbjct: 609 LRALNLFCGGGTFDRGLE---EGTAIRSEWAVEWDLPPMLTYRANHTNPEDVKLFRGSVD 665
Query: 62 Q---------------DIPDHDVLLAGFPCQPFSQA 82
+ + + AG PCQ +S A
Sbjct: 666 DFLAVAIRGQGSDLVAKLGQVEFISAGSPCQGYSLA 701
>gi|30684984|ref|NP_196966.2| DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2); N-methyltransferase
[Arabidopsis thaliana]
gi|75184795|sp|Q9M548|DRM2_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase DRM2; AltName:
Full=Protein DOMAINS REARRANGED METHYLASE 2
gi|7658293|gb|AAF66129.1|AF240695_1 cytosine methyltransferase [Arabidopsis thaliana]
gi|51970418|dbj|BAD43901.1| putative protein [Arabidopsis thaliana]
gi|62319261|dbj|BAD94486.1| putative protein [Arabidopsis thaliana]
gi|110738276|dbj|BAF01067.1| hypothetical protein [Arabidopsis thaliana]
gi|332004673|gb|AED92056.1| DNA (cytosine-5)-methyltransferase DRM2 [Arabidopsis thaliana]
Length = 626
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------FGD 55
+ + LF GIGG + L + ++ S EI+ + + + T F D
Sbjct: 502 INVLSLFTGIGGGEVALHRL--QIKMKLVVSVEISKVNRNILKDFWEQTNQTGELIEFSD 559
Query: 56 IAKIKTQ-------DIPDHDVLLAGFPCQPFSQAG 83
I + D+++ G PC AG
Sbjct: 560 IQHLTNDTIEGLMEKYGGFDLVIGGSPCNN--LAG 592
>gi|332858346|ref|XP_003316965.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 2 [Pan
troglodytes]
Length = 770
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 612
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 613 KKNIEEWGPFDLVIGGSPCNDLSN 636
>gi|28559063|ref|NP_787045.1| DNA (cytosine-5)-methyltransferase 3B isoform 3 [Homo sapiens]
gi|5823166|gb|AAD53062.1|AF156487_1 DNA cytosine-5 methyltransferase 3 beta 3 [Homo sapiens]
gi|5748520|emb|CAB53069.1| DNA (cytosine-5-)-methyltransferase 3 beta [Homo sapiens]
gi|119596757|gb|EAW76351.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_b [Homo
sapiens]
gi|119596759|gb|EAW76353.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_b [Homo
sapiens]
Length = 770
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 612
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 613 KKNIEEWGPFDLVIGGSPCNDLSN 636
>gi|2895087|gb|AAC39355.1| Met1-type cytosine DNA-methyltransferase [Daucus carota]
Length = 1545
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 28/110 (25%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP---YSVKTYQANFPNTLIFGDIAKIKT 61
D+F G GG+ L+++ ++ E + K + ++
Sbjct: 1111 LDIFAGCGGLSEGLQKSGV---CTTKWAIEYEEAAGDAFKLNHPESLMFINNCNVILKAI 1167
Query: 62 QD-------------------------------IPDHDVLLAGFPCQPFS 80
D D + G PCQ FS
Sbjct: 1168 MDKTGDADDCISTPEAAELAAKLSEEEIKNLPLPGQVDFINGGPPCQGFS 1217
>gi|119194775|ref|XP_001247991.1| hypothetical protein CIMG_01762 [Coccidioides immitis RS]
Length = 1040
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 18/96 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52
L+ +LFCG G LE + ++ E + + TY+AN N
Sbjct: 532 LRALNLFCGGGTFDRGLE---EGTAIRSEWAVEWDLPPMLTYRANHTNPEEVKLFRGSVD 588
Query: 53 ------FGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ + + AG PCQ +S A
Sbjct: 589 DFLAVAIRGQRSDLVAKLGQVEFISAGSPCQGYSLA 624
>gi|326485515|gb|EGE09525.1| DNA methyltransferase Dim-2 [Trichophyton equinum CBS 127.97]
Length = 1090
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 30/96 (31%), Gaps = 18/96 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-----------NPYSV----KTYQAN 46
LK +LF G G LE+ +E ++ E +P + N
Sbjct: 637 LKALNLFSGGGTFDRGLEEGGA---IESKWAVEWGLQQMLTYRANHPDAKGLKLFCGSVN 693
Query: 47 FPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
I D + AG PCQ +S A
Sbjct: 694 DYLFQAITGKENTYVARIGDVHFISAGSPCQGYSSA 729
>gi|298491379|ref|YP_003721556.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708]
gi|298233297|gb|ADI64433.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708]
Length = 379
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 29/107 (27%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL---------- 51
+ I F G G + L E T + +EI P + Y+ +
Sbjct: 5 ISIFSFFSGSGFLDLGFETT----GYNIVYVNEIFPPFMSAYRYSREILQLPSPEYGYHQ 60
Query: 52 -------------IFGDIAKIKTQDIPDHDVL--LAGFPCQPFSQAG 83
+ ++ ++++ + G PC FS G
Sbjct: 61 AEAADVSKLIAGTQAQQLNELVKSSRKSNNIVGFIGGPPCPDFSIGG 107
>gi|195655665|gb|ACG47300.1| DNA cytosine methyltransferase Zmet3 [Zea mays]
Length = 609
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 16/94 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+ + LF GIGG + L + + S E + + ++ + T I I
Sbjct: 486 MNVLSLFTGIGGAEVALHRLGIR--MNTVISVEKSEVNRTILKSWWDQTQIGTLIEINDV 543
Query: 60 ----------KTQDIPDHDVLLAGFPCQPFSQAG 83
+ I D+++ G PC AG
Sbjct: 544 QTLTADRIEAYIRRIGGFDLVIGGSPCNN--LAG 575
>gi|297739809|emb|CBI29991.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+ + DL+ G G + L + ++ ++ +INP++ ++ + N P T + + A+
Sbjct: 252 MTLLDLYSGCGAMSTGLCLGASLSGLKLVTRWAVDINPHACESLKLNHPETEVRNEAAED 311
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ + L C+ FS G
Sbjct: 312 FLSLLKEWATL-----CEDFSLLG 330
>gi|225441510|ref|XP_002275932.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 829
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+ + DL+ G G + L + ++ ++ +INP++ ++ + N P T + + A+
Sbjct: 254 MTLLDLYSGCGAMSTGLCLGASLSGLKLVTRWAVDINPHACESLKLNHPETEVRNEAAED 313
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
+ + L C+ FS G
Sbjct: 314 FLSLLKEWATL-----CEDFSLLG 332
>gi|120609258|ref|YP_968936.1| DNA-cytosine methyltransferase [Acidovorax citrulli AAC00-1]
gi|120587722|gb|ABM31162.1| DNA-cytosine methyltransferase [Acidovorax citrulli AAC00-1]
Length = 486
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----A 57
+ + GI + + + + +E + ++ FP GD+
Sbjct: 11 IDYGSVCSGI----EAVSLAWEPLGLRPAWFAETDAFASAVLAHRFPQVPNLGDMTLLAR 66
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQAG 83
+I+ +++ VL+ G PCQ FS AG
Sbjct: 67 RIRAREVAAPAVLVGGTPCQSFSTAG 92
>gi|302836690|ref|XP_002949905.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis]
gi|300264814|gb|EFJ49008.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis]
Length = 2277
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 33/110 (30%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59
D+F G GG+ + Q ++ E + + + Y+ N P+ +F + +
Sbjct: 1760 LDIFAGCGGLSEGMHQAGVA---RTRWAIEYDSEAAEAYKLNNPDAKVFCNNCNVLLRAA 1816
Query: 60 -----------------------------KTQDIPDHDVLLAGFPCQPFS 80
+++ G PCQ +S
Sbjct: 1817 MLKAGFEADCLADPTCVEAAAGLDAATLGDLPTPGSVALMMGGPPCQGYS 1866
>gi|296084835|emb|CBI27717.3| unnamed protein product [Vitis vinifera]
Length = 1417
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 32/110 (29%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59
D+F G GG+ L+Q+ ++ E + ++ N P + +F + +
Sbjct: 987 LDIFAGCGGLSEGLQQSGVSV---TKWAIEYEEPAGDAFKLNHPESSMFINNCNVILRAV 1043
Query: 60 -----------------------------KTQDIPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 1044 MEKCGDADDCLSTSEAAELATSLGEKDINNLPLPGQVDFINGGPPCQGFS 1093
>gi|89243223|gb|ABD64771.1| Met1 [Volvox carteri f. nagariensis]
Length = 2262
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 33/110 (30%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59
D+F G GG+ + Q ++ E + + + Y+ N P+ +F + +
Sbjct: 1745 LDIFAGCGGLSEGMHQAGVA---RTRWAIEYDSEAAEAYKLNNPDAKVFCNNCNVLLRAA 1801
Query: 60 -----------------------------KTQDIPDHDVLLAGFPCQPFS 80
+++ G PCQ +S
Sbjct: 1802 MLKAGFEADCLADPTCVEAAAGLDAATLGDLPTPGSVALMMGGPPCQGYS 1851
>gi|291388722|ref|XP_002710851.1| PREDICTED: DNA cytosine-5 methyltransferase 3 beta isoform 1
[Oryctolagus cuniculus]
Length = 776
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ N +I
Sbjct: 561 IRVLSLFDGIATGYLVLKELG--IKVEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 618
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K + D+++ G PC S
Sbjct: 619 KKNIDEWGPFDLVIGGSPCNDLSN 642
>gi|239931045|ref|ZP_04687998.1| putative 5-methylcytosine methyltransferase [Streptomyces
ghanaensis ATCC 14672]
Length = 483
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 20 QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPF 79
+ + E + + T +A GD+ P VL G PCQ F
Sbjct: 1 MAADVLGYQVTG-IEWDDDACATREAA-GMDTFHGDVRNYSASLFPHAQVLTGGPPCQTF 58
Query: 80 SQAG 83
+ AG
Sbjct: 59 TVAG 62
>gi|159481068|ref|XP_001698604.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282344|gb|EDP08097.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 2204
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 37/109 (33%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI------ 59
D+F G GG+ Q E ++ E + + ++ N P+T +F D +
Sbjct: 1730 DIFAGCGGLSEGFHQAGVA---ESRWAIEYDREAADAFKLNNPHTTVFCDNCNVLLRAAM 1786
Query: 60 ----------------------------KTQDIPDHDVLLAGFPCQPFS 80
+++ G PCQ +S
Sbjct: 1787 VKAGLEADCVSDPAAVEAARRLDPQVVADLPAPGAVGLMMGGPPCQGYS 1835
>gi|322801270|gb|EFZ21957.1| hypothetical protein SINV_06528 [Solenopsis invicta]
Length = 1113
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAK 58
++ LF G+ L L++ VE +++SEI+ + + I K
Sbjct: 791 RVLSLFDGLSTGFLVLQKLGLV--VEVYYASEIDVNALTISSAHFGDRISYLGDVRGITK 848
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQ 81
K Q+I D+L+ G PC S
Sbjct: 849 EKIQEIAPIDLLIGGSPCNDLSL 871
>gi|226088550|dbj|BAH37020.1| chromomethylase OsMET2b [Oryza sativa Japonica Group]
Length = 690
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 5 TDLFCGIGGIRLDLE--QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
DL+ G G + L F+ N+E ++ +IN Y+ + N P + + + +
Sbjct: 174 LDLYSGCGAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEKTEDFLA 233
Query: 63 DIPDHDVLL 71
I D L
Sbjct: 234 LIQQWDALC 242
>gi|222624499|gb|EEE58631.1| hypothetical protein OsJ_09996 [Oryza sativa Japonica Group]
Length = 1033
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 5 TDLFCGIGGIRLDLE--QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
DL+ G G + L F+ N+E ++ +IN Y+ + N P + + + +
Sbjct: 456 LDLYSGCGAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEKTEDFLA 515
Query: 63 DIPDHDVLL 71
I D L
Sbjct: 516 LIQQWDALC 524
>gi|24421681|gb|AAN60988.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa
Japonica Group]
gi|108706955|gb|ABF94750.1| C-5 cytosine-specific DNA methylase family protein, expressed
[Oryza sativa Japonica Group]
Length = 1761
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 5 TDLFCGIGGIRLDLE--QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
DL+ G G + L F+ N+E ++ +IN Y+ + N P + + + +
Sbjct: 456 LDLYSGCGAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEKTEDFLA 515
Query: 63 DIPDHDVLL 71
I D L
Sbjct: 516 LIQQWDALC 524
>gi|326514650|dbj|BAJ96312.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 16/93 (17%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK---- 58
+ LF GIGG + L + H + S EI + + + + T I
Sbjct: 478 NVLSLFTGIGGGEVALHRLGIH--MRTVVSVEIGEVNRRILRGWWDQTQTGTLIEIADVK 535
Query: 59 --------IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PC AG
Sbjct: 536 SLTNDRIATFVRRFGGFDLVIGGSPCNN--LAG 566
>gi|31074167|gb|AAP20554.1| DNA cytosine-5 methyltransferase 3b isoform 4 [Bos taurus]
Length = 735
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ N +I
Sbjct: 566 IRVLSLFDGIATGYLVLKELG--IKVEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 623
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 624 KKNIEEWGPFDLVIGGSPCNDLSN 647
>gi|260431846|ref|ZP_05785817.1| C-5 cytosine-specific DNA methylase [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415674|gb|EEX08933.1| C-5 cytosine-specific DNA methylase [Silicibacter
lacuscaerulensis ITI-1157]
Length = 381
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 27 VECFFSSEIN--PYSVKTYQANFPNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83
C F+++I+ + + L+ D+AK+ +IP D++ A FPCQ S AG
Sbjct: 23 WTCLFANDIDAKKAASYRANHDGGRELLLKDVAKVTVDEIPGSADLVWASFPCQDLSLAG 82
>gi|322708438|gb|EFZ00016.1| DNA (cytosine-5)-methyltransferase, putative [Metarhizium
anisopliae ARSEF 23]
Length = 1166
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 18/95 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----IA 57
L+ DLFCG G LE+ V ++++ N ++ TY AN + + I
Sbjct: 682 LRGLDLFCGGGNFGRGLEEGGA---VRMSWANDCNARAIHTYMANCSHPNLMSPFLGSID 738
Query: 58 KIKT-----------QDIPDHDVLLAGFPCQPFSQ 81
+ I D + G PC FS
Sbjct: 739 DFQREAFSGNFSKSVPTIGSVDFISGGSPCPGFST 773
>gi|190410730|ref|YP_001966068.1| DNA-cytosine methyltransferase [Thermus sp. 4C]
gi|133753293|gb|ABO38149.1| M.TspMI [Thermus sp. manalii]
gi|148608604|gb|ABQ95624.1| DNA-cytosine methyltransferase [Thermus sp. 4C]
Length = 437
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 35/101 (34%), Gaps = 24/101 (23%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN---------------PYSVKTYQANFP 48
+ DLF G GG+ + + + + ++ TY+AN
Sbjct: 36 VVDLFSGAGGMSYGFKYWGDRL-YKIIGAVDLEVAKPSDSKAKKGGGGTNCNATYEANIG 94
Query: 49 NTLIFGDIAKIKTQDI--------PDHDVLLAGFPCQPFSQ 81
+ DI ++ ++ VL++ PC FSQ
Sbjct: 95 IRPLKADITELNPREYRENLGLEVGQLGVLISCAPCTGFSQ 135
>gi|31074165|gb|AAP20553.1| DNA cytosine-5 methyltransferase 3b isoform 3 [Bos taurus]
Length = 763
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ N +I
Sbjct: 566 IRVLSLFDGIATGYLVLKELG--IKVEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 623
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 624 KKNIEEWGPFDLVIGGSPCNDLSN 647
>gi|242217704|ref|XP_002474649.1| predicted protein [Postia placenta Mad-698-R]
gi|220726179|gb|EED80137.1| predicted protein [Postia placenta Mad-698-R]
Length = 1157
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 31/108 (28%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
LK D F G+G L LE++ ++ + EI+P + + Q N P+T+++ + +
Sbjct: 682 LKAFDPFGGVGAFGLGLEESGC---LKVVQTIEISPSAAQALQENCPHTMVYNQCSNVVL 738
Query: 60 --------------------------KTQDIPDHDVLLAGFPCQPFSQ 81
D ++AGFPCQP SQ
Sbjct: 739 QYAIKNHAGHKPQVPRAIGNGQRALPDPPTPGQIDCIIAGFPCQPHSQ 786
>gi|164470590|gb|ABY58121.1| putative DNA cytosine 5-methyltransferase [Solanum lycopersicum]
Length = 602
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + L + S E + + ++ + T G++
Sbjct: 477 MNVLSLFSGIGGAEVALYRLGIQL--NNVVSVEKSEVNRNIVRSWWEQTNQRGNLIDFDD 534
Query: 62 QD-------------IPDHDVLLAGFPCQPFSQAG 83
D+L+ G PC AG
Sbjct: 535 VQQLNGDRLEQLIDSCGGFDLLIGGSPCNN--LAG 567
>gi|302763491|ref|XP_002965167.1| hypothetical protein SELMODRAFT_83383 [Selaginella moellendorffii]
gi|300167400|gb|EFJ34005.1| hypothetical protein SELMODRAFT_83383 [Selaginella moellendorffii]
Length = 338
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 11/86 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
+++ LF GIGG + L + S ++ + + I
Sbjct: 216 IRMLSLFSGIGGAEVALHRAGIKLKFVVCVESNVDNRRILERWWSTSGQTGQHRILDDVQ 275
Query: 57 ------AKIKTQDIPDHDVLLAGFPC 76
++ D+++ G PC
Sbjct: 276 DLTMAVVARLMEESGGFDLVIGGSPC 301
>gi|167625969|ref|YP_001676263.1| DNA-cytosine methyltransferase [Shewanella halifaxensis HAW-EB4]
gi|167355991|gb|ABZ78604.1| DNA-cytosine methyltransferase [Shewanella halifaxensis HAW-EB4]
Length = 530
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49
+ +LF G GG+ L LEQ+ E ++E++P + +++ NF N
Sbjct: 1 MNHIELFSGCGGLSLGLEQS----GFELTMANELSPMAAESFAYNFFN 44
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
D++ G PCQ FS AG
Sbjct: 132 QGGLDLVSGGPPCQSFSMAG 151
>gi|233770216|gb|ACQ91181.1| DRM-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 596
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+ + LF GIGG + L + ++ S EI+ S + + T G++ +
Sbjct: 471 INLLSLFSGIGGAEIALHRLGIR--MKNVVSVEISGVSRTVVRTWWEQTNQKGNLYHLAD 528
Query: 60 -----------KTQDIPDHDVLLAGFPCQPFSQAG 83
D+++ G PC AG
Sbjct: 529 VQELNADRLEHYINTFGGFDLVVGGSPCNN--LAG 561
>gi|326476794|gb|EGE00804.1| hypothetical protein TESG_08096 [Trichophyton tonsurans CBS 112818]
Length = 986
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 30/96 (31%), Gaps = 18/96 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-----------NPYSV----KTYQAN 46
LK +LF G G LE+ +E ++ E +P + N
Sbjct: 533 LKALNLFSGGGTFDRGLEEGGA---IESKWAVEWGLQQMLTYRANHPDAKGLKLFCGSVN 589
Query: 47 FPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
I D + AG PCQ +S A
Sbjct: 590 DYLFQAITGKENTYVARIGDVHFISAGSPCQGYSSA 625
>gi|31074169|gb|AAP20555.1| DNA cytosine-5 methyltransferase 3b isoform 5 [Bos taurus]
Length = 785
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ N +I
Sbjct: 566 IRVLSLFDGIATGYLVLKELG--IKVEKYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 623
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 624 KKNIEEWGPFDLVIGGSPCNDLSN 647
>gi|40021630|gb|AAR37051.1| putative cytosine DNA methyltransferase [Neurospora tetrasperma]
Length = 246
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 23/86 (26%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----VKTYQANFPNTLIFGDI 56
D F G GG + H + ++ + I
Sbjct: 89 YTAGDTFAGAGGASRGITDAGVHLEF----CVDNWEHAVASLNANFQGQDTTIYDIDMHN 144
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ + D+L PCQ +S A
Sbjct: 145 FIVDKEIRHRVDILHLLPPCQVWSPA 170
>gi|42567866|ref|NP_197042.2| DRM1 (domains rearranged methylase 1); DNA
(cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|257096638|sp|Q9LXE5|DRM1_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase DRM1; AltName:
Full=Protein DOMAINS REARRANGED METHYLASE 1
gi|332004771|gb|AED92154.1| DNA (cytosine-5)-methyltransferase DRM1 [Arabidopsis thaliana]
Length = 624
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
+ + LF GIGG + L + + S EI+ + ++ + T G + + K
Sbjct: 498 INVLSLFTGIGGGEVALHRL--QIKMNVVVSVEISDANRNILRSFWEQTNQKGILREFKD 555
Query: 61 ------------TQDIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PC AG
Sbjct: 556 VQKLDDNTIERLMDEYGGFDLVIGGSPCNN--LAG 588
>gi|321467881|gb|EFX78869.1| Dpahnia pulex DNMT3 [Daphnia pulex]
Length = 480
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57
L++ LF GIG + L + VE +++SE+ + + L ++
Sbjct: 197 LRVLSLFDGIGTGLVALRKLGIE--VEVYYASEVLTAAATVSRTRLGGVLHHIGSVGEVT 254
Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80
+ + ++I +L+ G PC FS
Sbjct: 255 QQRLEEISPIHLLIGGSPCNDFS 277
>gi|182437140|ref|YP_001824859.1| hypothetical protein SGR_3347 [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178465656|dbj|BAG20176.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 218
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 11/81 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ DLFC GG + + + I+ Y F + +
Sbjct: 6 LRVLDLFCCQGGAAMGYHRA----GFDVTG---IDLAPQPRYPFRFIQADAIDYVREHGA 58
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
+ D + A PCQ +S+A
Sbjct: 59 ----EFDFIHASPPCQRYSRA 75
>gi|7573311|emb|CAB87629.1| putative protein [Arabidopsis thaliana]
Length = 413
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------FGD 55
+ + LF GIGG + L + ++ S EI+ + + + T F D
Sbjct: 289 INVLSLFTGIGGGEVALHRL--QIKMKLVVSVEISKVNRNILKDFWEQTNQTGELIEFSD 346
Query: 56 IAKIKTQ-------DIPDHDVLLAGFPCQPFSQAG 83
I + D+++ G PC AG
Sbjct: 347 IQHLTNDTIEGLMEKYGGFDLVIGGSPCNN--LAG 379
>gi|297811595|ref|XP_002873681.1| hypothetical protein ARALYDRAFT_488304 [Arabidopsis lyrata subsp.
lyrata]
gi|297319518|gb|EFH49940.1| hypothetical protein ARALYDRAFT_488304 [Arabidopsis lyrata subsp.
lyrata]
Length = 629
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI------FGD 55
+ + LF GIGG + L + ++ S EI+ + + + T F D
Sbjct: 505 INVLSLFTGIGGGEVALHRL--QIRMKLVVSVEISKVNRNILKDFWEQTNQTGVLIEFSD 562
Query: 56 IAKIKTQ-------DIPDHDVLLAGFPCQPFSQAG 83
I + D+++ G PC AG
Sbjct: 563 IQHLTNDTIEGLMEKYGGFDLVIGGSPCNN--LAG 595
>gi|291539768|emb|CBL12879.1| Site-specific DNA methylase [Roseburia intestinalis XB6B4]
Length = 211
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 28/81 (34%), Gaps = 9/81 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ +LF G I E + FS E + + + DI ++
Sbjct: 1 MKVLELFAGTRSIGKAFESRGHE-----VFSVEWSKDFENIDLYEDISKVTAEDILRLF- 54
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
DV+ A C FS A
Sbjct: 55 ---GKPDVIWASPDCSTFSIA 72
>gi|322700739|gb|EFY92492.1| putative DNA cytosine methyltransferase [Metarhizium acridum CQMa
102]
Length = 950
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 18/95 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL----IFGDIA 57
L+ DLFCG G LE+ V ++++ N ++ TY AN + G I
Sbjct: 477 LRGLDLFCGGGNFGRGLEEGGA---VRMSWANDCNARAIHTYMANCSHPNLLSPYLGSID 533
Query: 58 KIKT-----------QDIPDHDVLLAGFPCQPFSQ 81
+ I D + G PC FS
Sbjct: 534 DFQKEAFSGNFSKSVPTIGSVDFISGGSPCPGFSL 568
>gi|290997570|ref|XP_002681354.1| predicted protein [Naegleria gruberi]
gi|284094978|gb|EFC48610.1| predicted protein [Naegleria gruberi]
Length = 435
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 33/113 (29%), Gaps = 33/113 (29%)
Query: 4 ITDLFCGIGGIRLDLEQT---------FNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54
I + + GIGG R+ LE + +IN + Y F +
Sbjct: 10 IAEFYSGIGGTRMSLEMIQAFFEAQVNGKKIKFNWIEAFDINENANTLYNNLFNHKPCAK 69
Query: 55 DIAKIKTQDIPDH------------------------DVLLAGFPCQPFSQAG 83
DI I D +H + PCQPF+ G
Sbjct: 70 DIVHIPIGDFQNHYFKLFKNSSLEQAKKKLKTEQTRKLMWTMSPPCQPFTLNG 122
>gi|7671507|emb|CAB89348.1| putative protein [Arabidopsis thaliana]
Length = 375
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
+ + LF GIGG + L + + S EI+ + ++ + T G + + K
Sbjct: 249 INVLSLFTGIGGGEVALHRL--QIKMNVVVSVEISDANRNILRSFWEQTNQKGILREFKD 306
Query: 61 ------------TQDIPDHDVLLAGFPCQPFSQAG 83
+ D+++ G PC AG
Sbjct: 307 VQKLDDNTIERLMDEYGGFDLVIGGSPCNN--LAG 339
>gi|300689724|ref|YP_003750719.1| DNA (cytosine-5-)-methyltransferase [Ralstonia solanacearum PSI07]
gi|299076784|emb|CBJ49392.1| putative DNA (cytosine-5-)-methyltransferase [Ralstonia
solanacearum PSI07]
Length = 540
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 35/133 (26%), Gaps = 53/133 (39%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVK---------TYQANFPNTL 51
I DLF G GG+ +H+ E S E +P + + +
Sbjct: 5 IIDLFAGPGGLGEGFASLSDHKGRSFFEIGLSIEKDPVAHRTLTLRAVFRHLRGTKDVKH 64
Query: 52 IFGDIAKIKTQ-----------------------------------------DIPDHDVL 70
+ I ++ + VL
Sbjct: 65 YYDYIRGHVSEADFRRIPAVAKAFAHATKEARCLELGKSDENSIDSEIRAALKGQETWVL 124
Query: 71 LAGFPCQPFSQAG 83
+ G PCQ +S AG
Sbjct: 125 VGGPPCQAYSLAG 137
>gi|327308782|ref|XP_003239082.1| hypothetical protein TERG_01066 [Trichophyton rubrum CBS 118892]
gi|326459338|gb|EGD84791.1| hypothetical protein TERG_01066 [Trichophyton rubrum CBS 118892]
Length = 1079
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 18/96 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------N 49
LK +LF G G LE+ VE ++ E + TY+AN P N
Sbjct: 626 LKALNLFSGGGTFDRGLEEGGA---VESKWAVEWGVQQMLTYRANHPDGKGLKLFCGSVN 682
Query: 50 TLIFGDIA---KIKTQDIPDHDVLLAGFPCQPFSQA 82
+ I I I D + AG PCQ +S A
Sbjct: 683 DYLLQAITGKENIYVAKIGDAHFISAGSPCQGYSSA 718
>gi|296199844|ref|XP_002747338.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 4
[Callithrix jacchus]
Length = 728
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 513 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 570
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 571 KKNIEEWGPFDLVIGGSPCNDLSN 594
>gi|322510870|gb|ADX06184.1| putative C-5 cytosine-specific DNA methyltransferase [Organic Lake
phycodnavirus 1]
Length = 465
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 23 NHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--IAKIKTQDIPDHDVLLAGFPCQPFS 80
++ N KT + N P+ I +Q + D+L G PCQ FS
Sbjct: 161 IKSGFTPILLNDNNNDCCKTLKHNHPDANIVCSSMDKIDYSQYVNKVDLLTGGVPCQSFS 220
Query: 81 QAG 83
QAG
Sbjct: 221 QAG 223
>gi|71608927|emb|CAI94868.1| M1.Hin4II m5C DNA methyltransferase [Haemophilus influenzae]
Length = 387
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 28/96 (29%), Gaps = 20/96 (20%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------ 56
LF G N EC ++E+ + + N G I
Sbjct: 6 TYISLFSSSGVGCYGF----KLENFECIATNELIERRLNVQKINKKCKFKSGYILGSIAE 61
Query: 57 ----------AKIKTQDIPDHDVLLAGFPCQPFSQA 82
K + D DV++A PCQ S A
Sbjct: 62 EETKAKLFNEVKKWHINGKDVDVVIATPPCQGMSVA 97
>gi|54027658|ref|YP_121899.1| hypothetical protein pnf1100 [Nocardia farcinica IFM 10152]
gi|54019166|dbj|BAD60535.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 561
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINP----YSVKTYQANFPNTLIFG 54
ML++ D FCG GG V C ++ + ++ +A+ +
Sbjct: 1 MLELMDWFCGAGGSTQG---ASKVPGV-CVTRAANHWDKAIETHATNYPEADHFLGDLST 56
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ AK + P D+ A C +S A
Sbjct: 57 EEAKAQIVKWPVADIFWASPECPQWSSA 84
>gi|156050777|ref|XP_001591350.1| hypothetical protein SS1G_07976 [Sclerotinia sclerotiorum 1980]
gi|154692376|gb|EDN92114.1| hypothetical protein SS1G_07976 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1392
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 19/97 (19%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL--------- 51
+L DLFCG G LE+ N ++ ++ +V+TY N +
Sbjct: 652 VLNGLDLFCGGGNFGRGLEEGGAVHN---KWAVDLFSAAVQTYSTNLKDPEGTDMFFGSV 708
Query: 52 -------IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
G+ K + D DV+LAG PCQ FS+
Sbjct: 709 NDLLVQAFEGNPQKFRIPSPGDVDVILAGSPCQGFSR 745
>gi|115313010|gb|AAI24099.1| DNA (cytosine-5-)-methyltransferase 4 [Danio rerio]
Length = 816
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
+++ LF GI L L V+ + +SE+ S ++ +I
Sbjct: 538 IRVLSLFDGIATGYLVLRDLG--FKVDLYIASEVCEDSISVGAVRHEGKIQYVHDVRNIT 595
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ + D+++ G PC S
Sbjct: 596 RKNIAEWGPFDMVIGGSPCNDLSI 619
>gi|70887603|ref|NP_001020621.1| DNA (cytosine-5)-methyltransferase 3B [Danio rerio]
gi|62433261|dbj|BAD95478.1| DNA methyltransferase [Danio rerio]
Length = 816
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
+++ LF GI L L V+ + +SE+ S ++ +I
Sbjct: 538 IRVLSLFDGIATGYLVLRDLG--FKVDLYIASEVCEDSISVGAVRHEGKIQYVHDVRNIT 595
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ + D+++ G PC S
Sbjct: 596 RKNIAEWGPFDMVIGGSPCNDLSI 619
>gi|291539093|emb|CBL12204.1| Site-specific DNA methylase [Roseburia intestinalis XB6B4]
Length = 212
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ +LF G I EQ + FS E + + + DI K+
Sbjct: 1 MKVLELFAGTRSIGKAFEQRGHE-----VFSVEWSKEFENIDLYEDISRVTAEDILKLF- 54
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
DV+ A C FS A
Sbjct: 55 ---GKPDVIWASPDCATFSIA 72
>gi|21226380|ref|NP_632302.1| DNA-cytosine methyltransferase [Methanosarcina mazei Go1]
gi|20904635|gb|AAM29974.1| DNA-cytosine methyltransferase [Methanosarcina mazei Go1]
Length = 423
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 33/132 (25%), Gaps = 54/132 (40%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---------LI 52
+ D+F G GG+ + + E N ++ + + +
Sbjct: 5 YTVLDMFSGAGGLTEGF----FQQGFKFVSHIEKNCHARNSLETRAIYHSLKDSSNERIY 60
Query: 53 FGDI-----------------------------------------AKIKTQDIPDHDVLL 71
I +K D DV++
Sbjct: 61 RDYISGNLNRDEFIHKFKELELTPAGLLQGEVTESNETTMIKEIKEHLKVIDSDSVDVVI 120
Query: 72 AGFPCQPFSQAG 83
G PCQ +S AG
Sbjct: 121 GGPPCQAYSVAG 132
>gi|323447739|gb|EGB03650.1| hypothetical protein AURANDRAFT_67860 [Aureococcus
anophagefferens]
Length = 723
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 8/82 (9%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----KT 61
++F G G + L V + E +P N P+ +GDI
Sbjct: 2 EIFAGSGSMSRAL----RDGGVSIVATCENDPRKAGALANNLPDVHNYGDIHDDSIVGHV 57
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ + AG CQ +S+AG
Sbjct: 58 WNPRSVSAIAAGVECQDYSKAG 79
>gi|167764508|ref|ZP_02436629.1| hypothetical protein BACSTE_02897 [Bacteroides stercoris ATCC
43183]
gi|167697177|gb|EDS13756.1| hypothetical protein BACSTE_02897 [Bacteroides stercoris ATCC
43183]
Length = 856
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 25/98 (25%), Gaps = 22/98 (22%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----- 57
LF G C + E+ +K N G I
Sbjct: 29 TYISLFSSAGVGCYGF----KEEGFYCIATVELLERRLKIQSYNHKCAYKSGYICGDMTL 84
Query: 58 -------------KIKTQDIPDHDVLLAGFPCQPFSQA 82
++ D DVL+A PCQ S A
Sbjct: 85 QETKDKVFNELTLWKSALNVTDLDVLIATPPCQGMSVA 122
>gi|94264149|ref|ZP_01287946.1| C-5 cytosine-specific DNA methylase [delta proteobacterium MLMS-1]
gi|93455407|gb|EAT05605.1| C-5 cytosine-specific DNA methylase [delta proteobacterium MLMS-1]
Length = 578
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 35/132 (26%), Gaps = 52/132 (39%)
Query: 4 ITDLFCGIGGIRLDL--EQTFNHRNVECFFSSEINPYSV-------------KTYQANFP 48
+ DLF G GG+ + + S E +PY+ K +
Sbjct: 65 VIDLFAGPGGLAEGFAAFRADEKKPFRIELSVEKDPYAHSTLELRAFFRQFPKNKIPDEY 124
Query: 49 NTLIFGDIAKIKTQDIPD-------------------------------------HDVLL 71
I +I+K + D +L+
Sbjct: 125 YAYIRQEISKTELFDAWPEESKKAKNEAWLAELGSEKLSSSEIDQRIKNALGDADKWMLI 184
Query: 72 AGFPCQPFSQAG 83
G PCQ +S G
Sbjct: 185 GGPPCQAYSTVG 196
>gi|332858348|ref|XP_003316966.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 3 [Pan
troglodytes]
Length = 728
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 513 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 570
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 571 KKNIEEWGPFDLVIGGSPCNDLSN 594
>gi|220672863|emb|CAX14547.1| DNA (cytosine-5-)-methyltransferase 8 [Danio rerio]
gi|220673212|emb|CAX13544.1| DNA (cytosine-5-)-methyltransferase 8 [Danio rerio]
Length = 852
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
+++ LF GI L L+ V+ + +SE+ S + + +I
Sbjct: 575 IRVLSLFDGIATGLLVLKDLGIQ--VDRYVASEVCEDSITVGMVRHFERITYVGDIRNIT 632
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 633 RKHIQEWGPFDLVIGGSPCNDLSI 656
>gi|10257413|gb|AAG15406.1| cytosine-5 DNA methyltransferase MET1 [Zea mays]
Length = 784
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 29/110 (26%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAKIK 60
D+F G GG+ L+Q ++ E + + + N P I K
Sbjct: 343 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFNKNHPEAVVFVDNCNVILKAI 399
Query: 61 TQDIPDHD------------------------------VLLAGFPCQPFS 80
D D + G PCQ FS
Sbjct: 400 MDKCGDTDDCVSTSEAAEQAAKLPEVNINNLPVPGEVEFINGGPPCQGFS 449
>gi|297619945|ref|YP_003708050.1| DNA-cytosine methyltransferase [Methanococcus voltae A3]
gi|297378922|gb|ADI37077.1| DNA-cytosine methyltransferase [Methanococcus voltae A3]
Length = 428
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 10/38 (26%), Gaps = 4/38 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DLFCG GG + EI
Sbjct: 27 FTFVDLFCGCGGFSRGF----IDEGFNPLVAIEIEENP 60
>gi|323447592|gb|EGB03507.1| hypothetical protein AURANDRAFT_67940 [Aureococcus anophagefferens]
Length = 1523
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----KT 61
++F G G + L+ V + E +P N PN +GDI
Sbjct: 274 EIFAGFGSMSRALQ----DGGVSIVATCENDPRKAGALANNLPNVHNYGDIHDDSIVGHV 329
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ + AG CQ +S+AG
Sbjct: 330 WNPRSVSAIAAGVECQDYSKAG 351
>gi|66392182|ref|NP_001018144.1| DNA (cytosine-5-)-methyltransferase 8 [Danio rerio]
gi|62433269|dbj|BAD95482.1| DNA methyltransferase [Danio rerio]
Length = 852
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
+++ LF GI L L+ V+ + +SE+ S + + +I
Sbjct: 575 IRVLSLFDGIATGLLVLKDLGIQ--VDRYVASEVCEDSITVGMVRHFERITYVGDIRNIT 632
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 633 RKHIQEWGPFDLVIGGSPCNDLSI 656
>gi|329962528|ref|ZP_08300509.1| C-5 cytosine-specific DNA methylase [Bacteroides fluxus YIT 12057]
gi|328529784|gb|EGF56676.1| C-5 cytosine-specific DNA methylase [Bacteroides fluxus YIT 12057]
Length = 370
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 15/94 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
+ DLFCG GG+ +E+ + V+ + ++ ++ AN P+ L F +
Sbjct: 21 VIDLFCGAGGLSEGVEEARLNGKRCVKVVCCVNHDKNAILSHDANIPDALHFIEDIRTLE 80
Query: 56 -------IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ +I+ +L A C FS+A
Sbjct: 81 LSPINIIVERIRQLYPDVMVMLHASLECTNFSKA 114
>gi|326800886|ref|YP_004318705.1| C-5 cytosine-specific DNA methylase [Sphingobacterium sp. 21]
gi|326551650|gb|ADZ80035.1| C-5 cytosine-specific DNA methylase [Sphingobacterium sp. 21]
Length = 531
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAK 58
L +TD FCG GG + + + +E + ++ T+ NFP+T+ D++
Sbjct: 6 LTVTDQFCGAGGNSQAVRRYAEKCNGGIEVTLAMNHWKLAIDTHNTNFPDTMHACTDVSA 65
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ P ++L+ C S AG
Sbjct: 66 CDPRRFPTTNILITSPECTTHSPAG 90
>gi|47201036|emb|CAF88359.1| unnamed protein product [Tetraodon nigroviridis]
Length = 234
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY----SVKTYQANFPNTLIFGDIA 57
+++ LF GI L L+ VE + +SE+ + ++ I
Sbjct: 142 IRVLSLFDGIATGYLVLKDLG--FKVETYIASEVCEDSIAVAAVNHEGKITQVGDVRFIN 199
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ D+L+ G PC S
Sbjct: 200 QEHLHRWGPFDLLIGGSPCNDLSI 223
>gi|254467075|ref|ZP_05080486.1| DNA-cytosine methyltransferase [Rhodobacterales bacterium Y4I]
gi|206687983|gb|EDZ48465.1| DNA-cytosine methyltransferase [Rhodobacterales bacterium Y4I]
Length = 497
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 39/132 (29%), Gaps = 50/132 (37%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKT----------------Y 43
I DLF G GG+ Q ++ S E++ ++++T Y
Sbjct: 5 FAIIDLFAGPGGLGEGFSQAGRVVDAQMKIHLSVEMDHHAIQTLRLRAFLRSFDEIPQEY 64
Query: 44 QANFPNTLIFGDIAKIKTQDI--------------------------------PDHDVLL 71
F D +++ + + +L+
Sbjct: 65 YDALNRGEQFPDWSELYPSNWRLAEREVRQRVLGAQGVFDELAVELDHAREAHNGNTILI 124
Query: 72 AGFPCQPFSQAG 83
G PCQ +S AG
Sbjct: 125 GGPPCQAYSLAG 136
>gi|319776379|ref|YP_004138867.1| putative 5-methylcytosine methyltransferase [Haemophilus
influenzae F3047]
gi|329123543|ref|ZP_08252106.1| modification methylase HphIA [Haemophilus aegyptius ATCC 11116]
gi|317450970|emb|CBY87199.1| Putative 5-methylcytosine methyltransferase [Haemophilus
influenzae F3047]
gi|327470359|gb|EGF15817.1| modification methylase HphIA [Haemophilus aegyptius ATCC 11116]
Length = 79
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50
L DLF G GG+ L + S E+ P +TY+ NFP+
Sbjct: 3 LTYLDLFSGAGGLSLGFDYA----GFRQLLSIELEPVYCETYRVNFPHH 47
>gi|282859818|ref|ZP_06268912.1| Eco57I restriction endonuclease [Prevotella bivia JCVIHMP010]
gi|282587438|gb|EFB92649.1| Eco57I restriction endonuclease [Prevotella bivia JCVIHMP010]
Length = 851
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 30/98 (30%), Gaps = 22/98 (22%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA----- 57
LF G +Q N C + E+ +K + N G I
Sbjct: 27 TYVSLFSSAGVGCYGFKQ----ENFYCIATVELLERRLKIQKYNQKCAYDSGYICGDMTQ 82
Query: 58 -------------KIKTQDIPDHDVLLAGFPCQPFSQA 82
+ ++ D DV++A PCQ S A
Sbjct: 83 KETQGRVFEELDLWKRNFNVKDLDVIIATPPCQGMSVA 120
>gi|301756030|ref|XP_002913875.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
3A-like [Ailuropoda melanoleuca]
Length = 957
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 679 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 736
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 737 QKHIQEWGPFDLVIGGSPCNDLSI 760
>gi|26346729|dbj|BAC37013.1| unnamed protein product [Mus musculus]
Length = 618
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 411 IRVLSLFDGIATGLLVLKDLGIQ--VDHYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 468
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 469 QKHIQEWGPFDLVIGGSPCNDLSI 492
>gi|262200549|ref|YP_003271757.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247]
gi|262083896|gb|ACY19864.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247]
Length = 399
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT--------YQANFPNTLIF 53
++ +LF L + +E + +S T Y +
Sbjct: 1 MRSVELFA----GGGGLTLGTHLAGFTTEVVAEWDRWSCDTLRENRDGGYPLVRDIDVEE 56
Query: 54 GDIAKIKTQDIPD-HDVLLAGFPCQPFSQAG 83
GD+ + +P+ D++ G PCQPFS G
Sbjct: 57 GDVRYVDWSSVPEGIDLVSGGPPCQPFSAGG 87
>gi|126540960|emb|CAM46957.1| DNA (cytosine-5-)-methyltransferase 5 [Danio rerio]
Length = 1296
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAK 58
++ LF GI L L VE + +SE++ SV N I +
Sbjct: 1013 RVLSLFDGIATGYLVLRDLG--FKVEKYVASEVDEESVTISMVNHEGKITYVDDVKKITR 1070
Query: 59 IKTQDIPDHDVLLAGFPCQPF 79
D+L+ G PC
Sbjct: 1071 KHIDKWGPFDLLIGGSPCNDL 1091
>gi|66472742|ref|NP_001018315.1| DNA methyltransferase dnmt5 [Danio rerio]
gi|62433263|dbj|BAD95479.1| DNA methyltransferase [Danio rerio]
Length = 1297
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAK 58
++ LF GI L L VE + +SE++ SV N I +
Sbjct: 1014 RVLSLFDGIATGYLVLRDLG--FKVEKYVASEVDEESVTISMVNHEGKITYVDDVKKITR 1071
Query: 59 IKTQDIPDHDVLLAGFPCQPF 79
D+L+ G PC
Sbjct: 1072 KHIDKWGPFDLLIGGSPCNDL 1092
>gi|332667836|ref|YP_004450624.1| hypothetical protein Halhy_5928 [Haliscomenobacter hydrossis DSM
1100]
gi|332336650|gb|AEE53751.1| hypothetical protein Halhy_5928 [Haliscomenobacter hydrossis DSM
1100]
Length = 246
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 11/79 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLFC GG + + + + +P ++ + + L +
Sbjct: 6 RLLDLFCKQGGCSMGYHRA----GFDVVG-VDKDPQPNYPFEFHQADALEYL------AT 54
Query: 63 DIPDHDVLLAGFPCQPFSQ 81
D++ A PCQ +S+
Sbjct: 55 HGHLFDIIHASPPCQGYSR 73
>gi|296199846|ref|XP_002747339.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 5
[Callithrix jacchus]
Length = 694
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 479 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 536
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 537 KKNIEEWGPFDLVIGGSPCNDLSN 560
>gi|170739778|ref|YP_001768433.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46]
gi|168194052|gb|ACA15999.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46]
Length = 423
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 25/100 (25%), Gaps = 24/100 (24%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-------------VKTYQANFPNT 50
D+F L + F+ E + ++ +
Sbjct: 8 FIDVFA----GCGGLSLGLLKAGWKGLFAIEKDAFAFDTLKHNLIDDGDRYRFVWPEWLE 63
Query: 51 LIFGDIAKIKTQDI-------PDHDVLLAGFPCQPFSQAG 83
I + D+L G PCQ FS AG
Sbjct: 64 KKPWTIEALMEAHPDELVNLRGKIDLLAGGPPCQGFSSAG 103
>gi|17390482|gb|AAH18214.1| DNMT3A protein [Homo sapiens]
Length = 285
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 7 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 64
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 65 QKHIQEWGPFDLVIGGSPCNDLSI 88
>gi|67514593|ref|NP_001020003.1| DNA (cytosine-5)-methyltransferase 3A [Gallus gallus]
gi|82227308|sp|Q4W5Z4|DNM3A_CHICK RecName: Full=DNA (cytosine-5)-methyltransferase 3A; Short=Dnmt3a
gi|66766324|dbj|BAD99023.1| DNA methyltransferase 3A [Gallus gallus]
Length = 877
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ ++
Sbjct: 599 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRNVT 656
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 657 QKHIQEWGPFDLVIGGSPCNDLSI 680
>gi|169977326|emb|CAQ18910.1| domains rearranged methyltransferase [Nicotiana sylvestris]
Length = 126
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 15/87 (17%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ LF GIGG + L + S E + + ++ + T G++
Sbjct: 1 NVLSLFSGIGGGEVALYRLGIPL--NTVVSVEKSEVNRDIVRSWWEQTNQKGNLIHFNDV 58
Query: 63 D-------------IPDHDVLLAGFPC 76
D+++ G PC
Sbjct: 59 QQLNGDRLEQLIESFGGFDLVIGGSPC 85
>gi|218193912|gb|EEC76339.1| hypothetical protein OsI_13909 [Oryza sativa Indica Group]
Length = 1527
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 29/110 (26%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAKIK 60
D+F G GG+ L+++ ++ E + + N P I K
Sbjct: 1095 LDIFAGCGGLSEGLQRSGLSL---TKWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAI 1151
Query: 61 TQDIPDHD------------------------------VLLAGFPCQPFS 80
D D + G PCQ FS
Sbjct: 1152 MDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFS 1201
>gi|75233438|sp|Q7Y1I7|DNM1A_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1A; Short=OsMET1a;
AltName: Full=DNA methyltransferase 1-1; Short=OsMET1-1
gi|31126751|gb|AAP44671.1| putative DNA (cytosine-5-)-methyltransferase [Oryza sativa Japonica
Group]
gi|171196101|dbj|BAG15928.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
gi|222625970|gb|EEE60102.1| hypothetical protein OsJ_12965 [Oryza sativa Japonica Group]
Length = 1527
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 29/110 (26%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAKIK 60
D+F G GG+ L+++ ++ E + + N P I K
Sbjct: 1095 LDIFAGCGGLSEGLQRSGLSL---TKWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAI 1151
Query: 61 TQDIPDHD------------------------------VLLAGFPCQPFS 80
D D + G PCQ FS
Sbjct: 1152 MDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFS 1201
>gi|18653391|gb|AAL77415.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1522
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 29/110 (26%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP----NTLIFGDIAKIK 60
D+F G GG+ L+++ ++ E + + N P I K
Sbjct: 1090 LDIFAGCGGLSEGLQRSGLSL---TKWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAI 1146
Query: 61 TQDIPDHD------------------------------VLLAGFPCQPFS 80
D D + G PCQ FS
Sbjct: 1147 MDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFS 1196
>gi|89055349|ref|YP_510800.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
gi|88864898|gb|ABD55775.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
Length = 502
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 36/131 (27%), Gaps = 51/131 (38%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN--VECFFSSE--------------------------- 34
I DLF G GG+ + ++ S E
Sbjct: 7 IIDLFAGPGGLAEGFSAAGRETDTRMKIRLSIEKEATEVRTLRLRAFLRGFDGGFPTEYY 66
Query: 35 -------------------INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHD---VLLA 72
+ +Q +F IA + + +HD +L+
Sbjct: 67 AALNASEPLPDWSELFPARWADACKEAWQMELGQPGVFEVIANVLDRTREEHDGNTILIG 126
Query: 73 GFPCQPFSQAG 83
G PCQ +S AG
Sbjct: 127 GPPCQAYSLAG 137
>gi|301321505|gb|ADK68895.1| Site-specific DNA methylase [Gordonia sp. KTR9]
Length = 331
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L +TD+F G GG + Q ++ + I +++++
Sbjct: 18 LTMTDIFSGAGGSSEGMTQAGVSVQ---VAANHWPVAVATHQVNHPDTEHILANLSEVDW 74
Query: 62 QDIPDHDVLLAGFPC 76
+ P D+L A C
Sbjct: 75 RSFPSTDILWASPSC 89
>gi|320009148|gb|ADW03998.1| hypothetical protein Sfla_2569 [Streptomyces flavogriseus ATCC
33331]
Length = 221
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ DL CG GG+ + +++P + + L + + +
Sbjct: 14 LRVLDLCCGAGGLSMGYYLAGYD-----VTGVDLHPMPNYPFTFRQADALDYLA-TIVAS 67
Query: 62 QDIPDHDVLLAGFPCQ 77
+I +DV+ A +PCQ
Sbjct: 68 GEIERYDVVHASWPCQ 83
>gi|187939689|gb|ACD38832.1| DNA methyltransferase family protein [Pseudomonas aeruginosa]
gi|187939767|gb|ACD38908.1| DNA cytosine methyltransferase [Pseudomonas aeruginosa]
Length = 696
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI----FGDIAKI 59
I DLF G GG LE + + NP ++ ++AN P+T I I
Sbjct: 28 IVDLFAGGGGASTGLEM---GLGRKVDLAINHNPAAISMHEANHPHTEHLPTDVWGIDPI 84
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
L A C+ SQA
Sbjct: 85 DATKGATVGWLHASPDCRHHSQA 107
>gi|332858350|ref|XP_003316967.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 4 [Pan
troglodytes]
Length = 694
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 479 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 536
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 537 KKNIEEWGPFDLVIGGSPCNDLSN 560
>gi|291387188|ref|XP_002710120.1| PREDICTED: DNA cytosine methyltransferase 3 alpha [Oryctolagus
cuniculus]
Length = 940
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 662 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 719
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 720 QKHIQEWGPFDLVIGGSPCNDLSI 743
>gi|121610581|ref|YP_998388.1| C-5 cytosine-specific DNA methylase [Verminephrobacter eiseniae
EF01-2]
gi|121555221|gb|ABM59370.1| C-5 cytosine-specific DNA methylase [Verminephrobacter eiseniae
EF01-2]
Length = 494
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
+ DLF G GG + Q + +P ++ +QAN P T + ++ +
Sbjct: 15 VIDLFAGGGGASCGIAQA---IGRSVDVAINHDPEAIGLHQANHPQTRHYCADVFEVDPV 71
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+L A C+ FS+A
Sbjct: 72 AVTHGRPVGLLWASPDCKHFSKA 94
>gi|261225387|ref|ZP_05939668.1| C-5 cytosine-specific DNA methylase [Escherichia coli O157:H7
str. FRIK2000]
gi|261255360|ref|ZP_05947893.1| C-5 cytosine-specific DNA methylase [Escherichia coli O157:H7
str. FRIK966]
gi|323182002|gb|EFZ67413.1| modification methylase XorII [Escherichia coli 1357]
Length = 401
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 25/81 (30%), Gaps = 14/81 (17%)
Query: 13 GIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKT---------Q 62
G+ L LE+ E E + + + G I
Sbjct: 2 GLDLGLEEA----GFELVACVEQDKAALKTIKTNKPNLAVFEGSIVDCTGSELLALAGVN 57
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
D + D++ G PCQ FS G
Sbjct: 58 DKEEIDLVAGGPPCQAFSVFG 78
>gi|193785499|dbj|BAG50865.1| unnamed protein product [Homo sapiens]
Length = 489
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ + +SE+ S+ ++ N +I
Sbjct: 274 IRVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 331
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 332 KKNIEEWGPFDLVIGGSPCNDLSN 355
>gi|51556225|ref|NP_001003958.1| DNA (cytosine-5)-methyltransferase 3A isoform 1 [Rattus norvegicus]
gi|123778851|sp|Q1LZ53|DNM3A_RAT RecName: Full=DNA (cytosine-5)-methyltransferase 3A; Short=Dnmt3a
gi|50539389|tpe|CAE52317.1| TPA: putative DNA (cytosine-5) methyltransferase 3a [Rattus
norvegicus]
Length = 908
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 630 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 687
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 688 QKHIQEWGPFDLVIGGSPCNDLSI 711
>gi|183230936|ref|XP_655267.2| DNA (cytosine-5)-methyltransferase [Entamoeba histolytica
HM-1:IMSS]
gi|45505012|gb|AAS66974.1| 5-cytosine DNA methyltransferase [Entamoeba histolytica]
gi|169802689|gb|EAL49892.2| DNA (cytosine-5)-methyltransferase, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 322
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+ + F GIGG+R E++ + N F +EI I+ IK
Sbjct: 7 NVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEEVQVKNLDSIS-IK 65
Query: 61 TQDIPDHDVLLAGFPCQPF 79
+ + + PCQP+
Sbjct: 66 QIESLNCNTWFMSPPCQPY 84
>gi|149727718|ref|XP_001503030.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 3 alpha [Equus
caballus]
Length = 909
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 631 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 688
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 689 QKHIQEWGPFDLVIGGSPCNDLSI 712
>gi|300777384|ref|ZP_07087242.1| DNA (cytosine-5-)-methyltransferase [Chryseobacterium gleum ATCC
35910]
gi|300502894|gb|EFK34034.1| DNA (cytosine-5-)-methyltransferase [Chryseobacterium gleum ATCC
35910]
Length = 351
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 27/85 (31%), Gaps = 11/85 (12%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEI-NPYSVKTYQANFPNTLIFGDI------AK 58
LF G E F + ++E+ + + +I G I
Sbjct: 5 SLFSSAG----IAETYFEEVGINIIAANELVQERADLYQALYPNSKMIAGSILDDKIFKT 60
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ D L+A PCQ S AG
Sbjct: 61 LVESTPEKLDFLIASPPCQGMSVAG 85
>gi|169633047|ref|YP_001706783.1| putative C-5 cytosine-specific DNA methylase [Acinetobacter
baumannii SDF]
gi|169151839|emb|CAP00671.1| putative C-5 cytosine-specific DNA methylase [Acinetobacter
baumannii]
Length = 517
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----IAKI 59
I D F G GG LE N + + NP ++ ++AN P+ + + I
Sbjct: 24 IVDFFAGGGGASTGLEMGLNRP---VYVAVNHNPKAISMHEANHPHAKHYIQDVFAVDPI 80
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
D A C SQA
Sbjct: 81 DICDGHQVGWFHASPDCTHHSQA 103
>gi|32350981|gb|AAP75901.1| DNA methyltransferase 3a [Bos taurus]
Length = 888
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 610 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 667
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 668 QKHIQEWGPFDLVIGGSPCNDLSI 691
>gi|51556273|ref|NP_001003959.1| DNA (cytosine-5)-methyltransferase 3B [Rattus norvegicus]
gi|50539393|tpe|CAE52319.1| TPA: putative DNA (cytosine-5) methyltransferase 3b [Rattus
norvegicus]
gi|149030965|gb|EDL85992.1| rCG37517, isoform CRA_a [Rattus norvegicus]
Length = 859
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L+ VE + +SE+ S+ ++ I
Sbjct: 581 IRVLSLFDGIATGYLVLKDLG--IKVEKYVASEVCAESIAVGTIKHEGQIKYVNDVRKIT 638
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 639 KKNIEEWGPFDLVIGGSPCNDLSN 662
>gi|168204994|ref|ZP_02630999.1| modification methylase DdeI [Clostridium perfringens E str.
JGS1987]
gi|168212393|ref|ZP_02638018.1| modification methylase DdeI [Clostridium perfringens CPE str.
F4969]
gi|170663374|gb|EDT16057.1| modification methylase DdeI [Clostridium perfringens E str.
JGS1987]
gi|170716088|gb|EDT28270.1| modification methylase DdeI [Clostridium perfringens CPE str.
F4969]
Length = 436
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 7/39 (17%), Positives = 15/39 (38%), Gaps = 4/39 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
+ + DLF G GG+ + + E + ++
Sbjct: 1 MNVIDLFSGGGGLTEGF----VRQGYKIIAHVEKDRWAC 35
>gi|149030966|gb|EDL85993.1| rCG37517, isoform CRA_b [Rattus norvegicus]
Length = 839
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L+ VE + +SE+ S+ ++ I
Sbjct: 561 IRVLSLFDGIATGYLVLKDLG--IKVEKYVASEVCAESIAVGTIKHEGQIKYVNDVRKIT 618
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 619 KKNIEEWGPFDLVIGGSPCNDLSN 642
>gi|126303513|ref|XP_001380132.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha
[Monodelphis domestica]
Length = 913
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ ++
Sbjct: 635 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRNVT 692
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 693 QKHIQEWGPFDLVIGGSPCNDLSI 716
>gi|332016329|gb|EGI57242.1| DNA (cytosine-5)-methyltransferase 3B [Acromyrmex echinatior]
Length = 778
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAK 58
++ LF G+ L L++ V+ +++SEI+ + + I K
Sbjct: 485 RVLSLFDGLSTGFLVLQKLGLV--VDVYYASEIDVNALTISSAHFGDRITYLGDVRSITK 542
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQ 81
K Q+I D+L+ G PC S
Sbjct: 543 EKIQEIAPIDLLIGGSPCNDLSL 565
>gi|193077633|gb|ABO12463.2| DNA cytosine methyltransferase [Acinetobacter baumannii ATCC 17978]
Length = 525
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIAKI 59
I D F G GG LE N + + NP ++ ++AN P+ + + I
Sbjct: 24 IVDFFAGGGGASTGLEMGLNRP---VYVAVNHNPKAISMHEANHPHAKHYVQDVFAVDPI 80
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
D A C SQA
Sbjct: 81 DICDGHQVGWFHASPDCTHHSQA 103
>gi|255560872|ref|XP_002521449.1| conserved hypothetical protein [Ricinus communis]
gi|223539348|gb|EEF40939.1| conserved hypothetical protein [Ricinus communis]
Length = 686
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 32/95 (33%), Gaps = 17/95 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + L + + S EI+ + + + T G + I
Sbjct: 562 ISLLSLFSGIGGAEVALHRLGIRL--KRVVSVEISEVNRNIMRCWWEQTNQTGTLIDIAD 619
Query: 62 QD-------------IPDHDVLLAGFPCQPFSQAG 83
D+++ G PC AG
Sbjct: 620 VHDLNADRLEQLMSSFGGFDLVVGGSPCNN--LAG 652
>gi|73980626|ref|XP_540110.2| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha
isoform a [Canis familiaris]
Length = 969
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 691 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 748
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 749 QKHIQEWGPFDLVIGGSPCNDLSI 772
>gi|6681209|ref|NP_031898.1| DNA (cytosine-5)-methyltransferase 3A isoform 1 [Mus musculus]
gi|17374900|sp|O88508|DNM3A_MOUSE RecName: Full=DNA (cytosine-5)-methyltransferase 3A; Short=Dnmt3a;
AltName: Full=DNA methyltransferase MmuIIIA; Short=DNA
MTase MmuIIIA; Short=M.MmuIIIA
gi|6449468|gb|AAC40177.2| DNA cytosine-5 methyltransferase 3A [Mus musculus]
gi|26354967|dbj|BAC41110.1| unnamed protein product [Mus musculus]
gi|74181067|dbj|BAE27806.1| unnamed protein product [Mus musculus]
gi|74188565|dbj|BAE28033.1| unnamed protein product [Mus musculus]
gi|74188590|dbj|BAE28043.1| unnamed protein product [Mus musculus]
gi|74188648|dbj|BAE28067.1| unnamed protein product [Mus musculus]
gi|148669440|gb|EDL01387.1| DNA methyltransferase 3A, isoform CRA_a [Mus musculus]
Length = 908
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 630 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 687
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 688 QKHIQEWGPFDLVIGGSPCNDLSI 711
>gi|13938621|gb|AAH07466.1| DNA methyltransferase 3A [Mus musculus]
Length = 908
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 630 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 687
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 688 QKHIQEWGPFDLVIGGSPCNDLSI 711
>gi|255588381|ref|XP_002534588.1| cytosine-specific methyltransferase, putative [Ricinus communis]
gi|223524973|gb|EEF27795.1| cytosine-specific methyltransferase, putative [Ricinus communis]
Length = 362
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 33/104 (31%), Gaps = 26/104 (25%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK DLF G L + +E F+ E + + +T++ NF
Sbjct: 13 LKFIDLFAGC----GGLSLGLSLGGLEGQFAIERDAMAFETFKENFLAARDLPIARFAWP 68
Query: 62 QD----------------------IPDHDVLLAGFPCQPFSQAG 83
Q DVL G PCQ FS AG
Sbjct: 69 QWLALQPWSIDELLDKHGIEVAGLAHQIDVLAGGPPCQGFSFAG 112
>gi|218192371|gb|EEC74798.1| hypothetical protein OsI_10599 [Oryza sativa Indica Group]
Length = 1760
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 5 TDLFCGIGGIRLDLE--QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
DL+ G G + L F+ N+E ++ +IN Y+ + + N P + + + +
Sbjct: 456 LDLYSGCGAMSTGLCLGFAFSGINLETRWAVDINKYACASLKHNHPYSQVRNEKTEDFLA 515
Query: 63 DIPDHDVLL 71
I D L
Sbjct: 516 LIQQWDALC 524
>gi|167539782|ref|XP_001741349.1| DNA (cytosine-5)-methyltransferase [Entamoeba dispar SAW760]
gi|165894050|gb|EDR22134.1| DNA (cytosine-5)-methyltransferase, putative [Entamoeba dispar
SAW760]
Length = 322
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHR--NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
++ + F GIGG+R E + + F +EI I+ IK
Sbjct: 7 RVIEFFSGIGGLRSSYEHSSINISATFIPFDINEIANKIYSKNFKEEVQVKNLDSIS-IK 65
Query: 61 TQDIPDHDVLLAGFPCQPF 79
+ + + PCQP+
Sbjct: 66 QIESLNCNTWFMSPPCQPY 84
>gi|127486|sp|P23737|MTS9_STAAU RecName: Full=Modification methylase Sau96I; Short=M.Sau96I;
AltName: Full=Cytosine-specific methyltransferase Sau96I
gi|581567|emb|CAA37260.1| Sau96I DNA methyltransferase [Staphylococcus aureus]
gi|329730456|gb|EGG66846.1| DNA-binding helix-turn-helix protein [Staphylococcus aureus subsp.
aureus 21193]
Length = 430
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 23 NHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKI----KTQDIPDHDVLLAGFPCQ 77
+ + + EI+ + +T +I DI I + D+L G+PCQ
Sbjct: 116 ESAGLSTYGAVEIDKNAAETLRINRPKWKVIENDIEFIADNLDEFIDEEIDILSGGYPCQ 175
Query: 78 PFSQAG 83
FS AG
Sbjct: 176 TFSYAG 181
>gi|326319209|ref|YP_004236881.1| DNA-cytosine methyltransferase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376045|gb|ADX48314.1| DNA-cytosine methyltransferase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 526
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 34/133 (25%), Gaps = 53/133 (39%)
Query: 4 ITDLFCGIGGIRLDLE---QTFNHRNVECFFSSEINPYSVKT-------------YQANF 47
+ DLF G GG+ R S E +P + +T
Sbjct: 15 VIDLFAGPGGLCEGFSSVVDATGSRRFAVKISIEKDPVAHRTLLLRAIFRQFPDGKVPGC 74
Query: 48 PNTLIFGDIAKIKTQDIPD-------------------------------------HDVL 70
+ G I + + P+ VL
Sbjct: 75 YYDYVRGKINREQFLAHPEIKAVAEHAAREARCAELGVTPASEVDGWIREALGDQTDWVL 134
Query: 71 LAGFPCQPFSQAG 83
+ G PCQ +S AG
Sbjct: 135 IGGPPCQAYSLAG 147
>gi|309267827|ref|XP_001004878.2| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like [Mus
musculus]
Length = 763
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ +I
Sbjct: 485 IRVLSLFDGIATGYLVLKELG--IKVEKYIASEVCAESIAVGTVKHEGQIKYVDDIRNIT 542
Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80
K + D+++ G PC S
Sbjct: 543 KEHIDEWGPFDLVIGGSPCNDLS 565
>gi|161761041|pdb|2QRV|A Chain A, Structure Of Dnmt3a-Dnmt3l C-Terminal Domain Complex
gi|161761044|pdb|2QRV|D Chain D, Structure Of Dnmt3a-Dnmt3l C-Terminal Domain Complex
gi|161761045|pdb|2QRV|E Chain E, Structure Of Dnmt3a-Dnmt3l C-Terminal Domain Complex
gi|161761048|pdb|2QRV|H Chain H, Structure Of Dnmt3a-Dnmt3l C-Terminal Domain Complex
Length = 295
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 17 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 74
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 75 QKHIQEWGPFDLVIGGSPCNDLSI 98
>gi|32350983|gb|AAP75902.1| DNA methyltransferase 3a isoform 4 [Bos taurus]
Length = 821
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 543 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 600
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 601 QKHIQEWGPFDLVIGGSPCNDLSI 624
>gi|330417960|ref|NP_001193431.1| DNA (cytosine-5)-methyltransferase 3A [Bos taurus]
Length = 909
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 631 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 688
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 689 QKHIQEWGPFDLVIGGSPCNDLSI 712
>gi|167774091|gb|ABZ92480.1| DNA (cytosine-5-)-methyltransferase 3 alpha [synthetic construct]
Length = 912
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 634 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 691
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 692 QKHIQEWGPFDLVIGGSPCNDLSI 715
>gi|114576486|ref|XP_001148246.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha
isoform 1 [Pan troglodytes]
gi|114576488|ref|XP_001148658.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha
isoform 4 [Pan troglodytes]
Length = 909
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 631 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 688
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 689 QKHIQEWGPFDLVIGGSPCNDLSI 712
>gi|18033253|gb|AAL57039.1|AF331856_1 DNA cytosine methyltransferase 3 alpha [Homo sapiens]
Length = 909
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 631 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 688
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 689 QKHIQEWGPFDLVIGGSPCNDLSI 712
>gi|119621133|gb|EAX00728.1| DNA (cytosine-5-)-methyltransferase 3 alpha, isoform CRA_b [Homo
sapiens]
Length = 914
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 636 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 693
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 694 QKHIQEWGPFDLVIGGSPCNDLSI 717
>gi|172088108|ref|NP_001116469.1| DNA (cytosine-5)-methyltransferase 3B isoform 5 [Mus musculus]
gi|76780249|gb|AAI05923.1| DNA methyltransferase 3B [Mus musculus]
gi|111493961|gb|AAI05678.1| DNA methyltransferase 3B [Mus musculus]
gi|123234595|emb|CAM27222.1| DNA methyltransferase 3B [Mus musculus]
Length = 860
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ I
Sbjct: 582 IRVLSLFDGIATGYLVLKELG--IKVEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 639
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 640 KKNIEEWGPFDLVIGGSPCNDLSN 663
>gi|12751473|ref|NP_072046.2| DNA (cytosine-5)-methyltransferase 3A isoform a [Homo sapiens]
gi|28559069|ref|NP_783328.1| DNA (cytosine-5)-methyltransferase 3A isoform a [Homo sapiens]
gi|166215081|sp|Q9Y6K1|DNM3A_HUMAN RecName: Full=DNA (cytosine-5)-methyltransferase 3A; Short=Dnmt3a;
AltName: Full=DNA methyltransferase HsaIIIA; Short=DNA
MTase HsaIIIA; Short=M.HsaIIIA
gi|12746532|gb|AAD33084.2|AF067972_1 DNA cytosine methyltransferase 3 alpha [Homo sapiens]
gi|27694444|gb|AAH43617.1| DNA (cytosine-5-)-methyltransferase 3 alpha [Homo sapiens]
gi|62822212|gb|AAY14761.1| unknown [Homo sapiens]
gi|119621132|gb|EAX00727.1| DNA (cytosine-5-)-methyltransferase 3 alpha, isoform CRA_a [Homo
sapiens]
gi|261859196|dbj|BAI46120.1| DNA (cytosine-5-)-methyltransferase 3 alpha [synthetic construct]
Length = 912
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 634 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 691
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 692 QKHIQEWGPFDLVIGGSPCNDLSI 715
>gi|332535196|ref|ZP_08411002.1| modification methylase [Pseudoalteromonas haloplanktis ANT/505]
gi|332035361|gb|EGI71862.1| modification methylase [Pseudoalteromonas haloplanktis ANT/505]
Length = 512
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 35/134 (26%), Gaps = 54/134 (40%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKT--------------YQAN 46
+ DLF G GG+ + + S E + ++ KT +
Sbjct: 8 VIDLFAGPGGLGEGISAAKTEVGKSPFQIGISVEKDFHAHKTLTTRAFFRSLKKKSQPLD 67
Query: 47 FPNTLIFGDIAKIKTQD-------------------------------------IPDHDV 69
+ G I + + + V
Sbjct: 68 NYYNYLHGKITRDELFELHPDIATEANQETLNGAKELGKDNKLIHKRIKELVKDHKGPKV 127
Query: 70 LLAGFPCQPFSQAG 83
L+ G PCQ +S AG
Sbjct: 128 LIGGPPCQAYSLAG 141
>gi|257438608|ref|ZP_05614363.1| modification methylase NgoMIV [Faecalibacterium prausnitzii
A2-165]
gi|257198937|gb|EEU97221.1| modification methylase NgoMIV [Faecalibacterium prausnitzii
A2-165]
Length = 293
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Query: 25 RNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
E Y +I D+ K D+L G PC PFS AG
Sbjct: 2 AGFVHVALVEYEQEYCNVLKANRPEWNVICADVHKFDGHPYEGVDLLAGGVPCPPFSVAG 61
>gi|240141810|ref|YP_002966318.1| hypothetical protein MexAM1_META2p0039 [Methylobacterium
extorquens AM1]
gi|240011752|gb|ACS42977.1| Hypothetical protein MexAM1_META2p0039 [Methylobacterium
extorquens AM1]
Length = 250
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 25/78 (32%), Gaps = 20/78 (25%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ LF GIG + E+ P+ L GD+
Sbjct: 8 VLSLFPGIGLLDQAFEEAG-------------------FCMVRGPDLLWGGDVRSFHPP- 47
Query: 64 IPDHDVLLAGFPCQPFSQ 81
D ++ G PCQ FS+
Sbjct: 48 CGRFDGIVGGPPCQAFSR 65
>gi|149633079|ref|XP_001509081.1| PREDICTED: similar to DNA methyltransferase 3A [Ornithorhynchus
anatinus]
Length = 815
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ ++
Sbjct: 537 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRNVT 594
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 595 QKHIQEWGPFDLVIGGSPCNDLSI 618
>gi|62087246|dbj|BAD92070.1| DNA cytosine methyltransferase 3 alpha isoform a variant [Homo
sapiens]
Length = 811
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 664 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 721
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 722 QKHIQEWGPFDLVIGGSPCNDLSI 745
>gi|172088099|ref|NP_001003961.2| DNA (cytosine-5)-methyltransferase 3B isoform 1 [Mus musculus]
gi|17374904|sp|O88509|DNM3B_MOUSE RecName: Full=DNA (cytosine-5)-methyltransferase 3B; Short=Dnmt3b;
AltName: Full=DNA methyltransferase MmuIIIB; Short=DNA
MTase MmuIIIB; Short=M.MmuIIIB
gi|6449470|gb|AAC40178.2| DNA cytosine-5 methyltransferase 3B1 [Mus musculus]
gi|123234597|emb|CAM27224.1| DNA methyltransferase 3B [Mus musculus]
gi|148674086|gb|EDL06033.1| mCG10465, isoform CRA_b [Mus musculus]
gi|148674089|gb|EDL06036.1| mCG10465, isoform CRA_b [Mus musculus]
Length = 859
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ I
Sbjct: 581 IRVLSLFDGIATGYLVLKELG--IKVEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 638
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 639 KKNIEEWGPFDLVIGGSPCNDLSN 662
>gi|294778769|ref|ZP_06744188.1| C-5 cytosine-specific DNA methylase [Bacteroides vulgatus PC510]
gi|294447425|gb|EFG16006.1| C-5 cytosine-specific DNA methylase [Bacteroides vulgatus PC510]
Length = 609
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 15/94 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
+ DLFCG GG+ +E N + + ++ ++ AN P+ L F +
Sbjct: 21 VIDLFCGAGGLSEGVEAARLDGNKCAKVVCCVNHDKNAILSHDANIPDALHFIEDIRTLE 80
Query: 56 -------IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ +I+ +L A C FS+A
Sbjct: 81 LSPISTIVERIRQLYPDAMIMLHASLECTNFSKA 114
>gi|54026007|ref|YP_120249.1| hypothetical protein nfa40370 [Nocardia farcinica IFM 10152]
gi|54017515|dbj|BAD58885.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 592
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 11/85 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFS-------SEINPYSVKTYQANFPNTLIFGDIA 57
DLF G GG+ +E + E++ + + + +
Sbjct: 24 VDLFSGFGGLTQGIELA----GFTTIMAANHRRYKVEVHEANHPHAEHWIADLVDPESAD 79
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82
+D+P D+L+AG C SQA
Sbjct: 80 YHSARDLPAADLLVAGVSCVNHSQA 104
>gi|8347118|gb|AAF74515.1|AF151969_1 DNA cytosine-specific methyltransferase isoform 1 [Mus musculus]
gi|8347128|gb|AAF74519.1|AF151973_1 DNA cytosine-specific methyltransferase isoform 5 [Mus musculus]
Length = 859
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ I
Sbjct: 581 IRVLSLFDGIATGYLVLKELG--IKVEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 638
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 639 KKNIEEWGPFDLVIGGSPCNDLSN 662
>gi|42560766|ref|NP_975217.1| cytosine-specific DNA-methyltransferase Sau96I [Mycoplasma
mycoides subsp. mycoides SC str. PG1]
gi|42492262|emb|CAE76859.1| Cytosine-specific DNA-methyltransferase Sau96I [Mycoplasma
mycoides subsp. mycoides SC str. PG1]
gi|301320716|gb|ADK69359.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 341
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
K +LF L E E + +V+T + ++F D+ K+
Sbjct: 5 YKSIELF----AGAGGLALGLEQAGFEHVGLVEFDKQAVETLKFNSPNWNIVFEDVQKVS 60
Query: 61 TQDIPDH--------DVLLAGFPCQPFSQAG 83
+D+ D+L G PCQ FS AG
Sbjct: 61 QRDLKKEFNLKERELDLLSGGAPCQSFSYAG 91
>gi|297625484|ref|YP_003687247.1| DNA (cytosine-5-)-methyltransferase [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
gi|296921249|emb|CBL55799.1| DNA (cytosine-5-)-methyltransferase [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
Length = 552
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK 41
M + +LF G GG+ L L E ++E++P + +
Sbjct: 1 MPRFVELFAGCGGLSLGLRAA----GWEEAMANELSPMAAQ 37
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +Q D D++ G PCQ FS AG
Sbjct: 118 MRDHPSQRPKDVDLISGGPPCQSFSMAG 145
>gi|309264629|ref|XP_003086323.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like [Mus
musculus]
Length = 740
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ +I
Sbjct: 462 IRVLSLFDGIATGYLVLKELG--IKVEKYIASEVCAESIAVGTVKHEGQIKYVDDIRNIT 519
Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80
K + D+++ G PC S
Sbjct: 520 KEHIDEWGPFDLVIGGSPCNDLS 542
>gi|116620808|ref|YP_822964.1| DNA-cytosine methyltransferase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223970|gb|ABJ82679.1| DNA-cytosine methyltransferase [Candidatus Solibacter usitatus
Ellin6076]
Length = 423
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 25/102 (24%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-------NPYSVKTYQANFPNTLIFG- 54
++ F G+G + L E+ F +E ++ + N P
Sbjct: 30 RLFSFFSGLGFLDLGFEKA----GYTVAFVNEFRASFLKAYKHARLHLKMNPPEYGYVQG 85
Query: 55 DIAKI-------------KTQDIPDHDVLLAGFPCQPFSQAG 83
DI+ ++ + + G PC FS G
Sbjct: 86 DISDFLNGAGDRLSGQVRDSKLAGNLVGFVGGPPCPDFSVGG 127
>gi|254884614|ref|ZP_05257324.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_3_47FAA]
gi|254837407|gb|EET17716.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_3_47FAA]
Length = 611
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 15/94 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
+ DLFCG GG+ +E+ N + + ++ ++ AN P+ L F +
Sbjct: 21 VIDLFCGAGGLSEGVEEARLDGNRCAKVVCCVNHDKNAILSHDANIPDALHFIEDIRTLE 80
Query: 56 -------IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ +I+ +L A C FS+A
Sbjct: 81 LSPISTIVERIRQLYPDAMIMLHASLECTNFSKA 114
>gi|149030967|gb|EDL85994.1| rCG37517, isoform CRA_c [Rattus norvegicus]
Length = 796
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L+ VE + +SE+ S+ ++ I
Sbjct: 581 IRVLSLFDGIATGYLVLKDLG--IKVEKYVASEVCAESIAVGTIKHEGQIKYVNDVRKIT 638
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 639 KKNIEEWGPFDLVIGGSPCNDLSN 662
>gi|149030968|gb|EDL85995.1| rCG37517, isoform CRA_d [Rattus norvegicus]
Length = 776
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L+ VE + +SE+ S+ ++ I
Sbjct: 561 IRVLSLFDGIATGYLVLKDLG--IKVEKYVASEVCAESIAVGTIKHEGQIKYVNDVRKIT 618
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 619 KKNIEEWGPFDLVIGGSPCNDLSN 642
>gi|32455595|ref|NP_862078.1| putative modification methylase [Streptomyces lividans]
gi|28883246|gb|AAO61179.1| putative modification methylase [Streptomyces lividans]
Length = 426
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L TDLFCG+GG L + + +N +V+ + + I
Sbjct: 8 LDFTDLFCGLGGSTRGLTEAGMRARLV------MNHDAVQVAAHRLNHPECEHLVEDINA 61
Query: 62 QDI---PDHDVLLAGFPCQPFSQAG 83
D P +L C S AG
Sbjct: 62 FDKRSLPRTRILWGSPICTEISPAG 86
>gi|172088101|ref|NP_001003960.2| DNA (cytosine-5)-methyltransferase 3B isoform 2 [Mus musculus]
gi|6449472|gb|AAC40179.2| DNA cytosine-5 methyltransferase 3B2 [Mus musculus]
gi|123234598|emb|CAM27225.1| DNA methyltransferase 3B [Mus musculus]
gi|148674090|gb|EDL06037.1| mCG10465, isoform CRA_d [Mus musculus]
gi|148674091|gb|EDL06038.1| mCG10465, isoform CRA_d [Mus musculus]
Length = 839
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ I
Sbjct: 561 IRVLSLFDGIATGYLVLKELG--IKVEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 618
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 619 KKNIEEWGPFDLVIGGSPCNDLSN 642
>gi|40226497|gb|AAH23612.1| DNMT3A protein [Homo sapiens]
Length = 351
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 73 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 130
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 131 QKHIQEWGPFDLVIGGSPCNDLSI 154
>gi|186684463|ref|YP_001867659.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
gi|14594706|gb|AAK68641.1| cytosine-specific DNA methyltransferase [Nostoc punctiforme PCC
73102]
gi|186466915|gb|ACC82716.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
Length = 413
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 26/105 (24%), Gaps = 29/105 (27%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP--------NTLIFGD 55
I F G G + L E + + +EI + Y + G+
Sbjct: 7 IFSFFAGSGFLDLGFETS----GFNIVYVNEIFSPFMAAYSYSRQILNLPLPEYGYHHGE 62
Query: 56 IAKIKTQDIPDHD-----------------VLLAGFPCQPFSQAG 83
I + + G PC FS G
Sbjct: 63 IGDVTQLHEGLQAQHLRELVQDCRKSNNIVGFIGGPPCPDFSIGG 107
>gi|307546988|ref|YP_003899467.1| DNA-cytosine methyltransferase [Halomonas elongata DSM 2581]
gi|307219012|emb|CBV44282.1| DNA-cytosine methyltransferase [Halomonas elongata DSM 2581]
Length = 566
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 34/134 (25%), Gaps = 52/134 (38%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVKTYQANFPNTLIFG---- 54
+ I DLF G GG+ + S E + + +T L+
Sbjct: 5 IHIVDLFAGPGGLGEGFSSIRRPDGSRQFKTLVSVEKDAAAHRTLTMRAFYRLLHDSGMG 64
Query: 55 ------------------DIAKIKTQ---------------------------DIPDHDV 69
D+ + Q + V
Sbjct: 65 MSAYYDYLLGGEHPSARADVQHLWDQAREEALCLKLGSEDGNRTLEDRLRKELTGCSNWV 124
Query: 70 LLAGFPCQPFSQAG 83
L+ G PCQ +S AG
Sbjct: 125 LIGGPPCQAYSVAG 138
>gi|8347120|gb|AAF74516.1|AF151970_1 DNA cytosine-specific methyltransferase isoform 2 [Mus musculus]
gi|8347131|gb|AAF74520.1|AF151974_1 DNA cytosine-specific methyltransferase isoform 6 [Mus musculus]
Length = 839
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ I
Sbjct: 561 IRVLSLFDGIATGYLVLKELG--IKVEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 618
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 619 KKNIEEWGPFDLVIGGSPCNDLSN 642
>gi|289620954|emb|CBI52688.1| unnamed protein product [Sordaria macrospora]
Length = 1536
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 18/95 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
LK DL+CG G LE+ VE ++++I ++ TY AN P+
Sbjct: 858 LKGMDLYCGGGNFGRGLEEGGV---VEMRWANDIWDKAIHTYMANTPDPEKTNPFLGSVD 914
Query: 57 ----------AKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ D + AG PC FS
Sbjct: 915 DLLRLALEGKFSDNVPRPGEVDFIAAGSPCPGFSL 949
>gi|164510148|emb|CAJ40945.1| putative DNA cytosine methyltransferase [Sordaria macrospora]
Length = 1536
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 18/95 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
LK DL+CG G LE+ VE ++++I ++ TY AN P+
Sbjct: 858 LKGMDLYCGGGNFGRGLEEGGV---VEMRWANDIWDKAIHTYMANTPDPEKTNPFLGSVD 914
Query: 57 ----------AKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ D + AG PC FS
Sbjct: 915 DLLRLALEGKFSDNVPRPGEVDFIAAGSPCPGFSL 949
>gi|126459191|ref|YP_001055469.1| DNA-cytosine methyltransferase [Pyrobaculum calidifontis JCM
11548]
gi|126248912|gb|ABO08003.1| DNA-cytosine methyltransferase [Pyrobaculum calidifontis JCM
11548]
Length = 313
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 23 NHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQD---IPDHDVLLAGFPCQP 78
+ EI+ + +TY N P+ ++ DI + +D DV++ PC+P
Sbjct: 18 RQAGFRILTAVEIDRDAARTYSFNHPDVVVLQEDIRDVDYKDLEAWGKVDVVIGSPPCEP 77
Query: 79 FSQA 82
F+ A
Sbjct: 78 FTAA 81
>gi|83945820|ref|ZP_00958162.1| probable C-5 cytosine-specific DNA methylase [Oceanicaulis
alexandrii HTCC2633]
gi|83850767|gb|EAP88630.1| probable C-5 cytosine-specific DNA methylase [Oceanicaulis
alexandrii HTCC2633]
Length = 681
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 8/84 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKTQ 62
I D F G GG + + + +P + + +I +
Sbjct: 9 IADCFAGAGGASMGIFLA---LGRHPDVAINHDPDAIRMHGVNHPDTYHFNSNIWNVDPD 65
Query: 63 D----IPDHDVLLAGFPCQPFSQA 82
D +L A C+ FS+A
Sbjct: 66 DVVRRFGPVGLLWASPDCKHFSKA 89
>gi|310796311|gb|EFQ31772.1| C-5 cytosine-specific DNA methylase [Glomerella graminicola M1.001]
Length = 1141
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 16/93 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG--DIAKI 59
L+ DLFCG G LE+ +E +++++N ++ TY AN NT+ I +
Sbjct: 616 LRGFDLFCGGGNFGRGLEEGGV---IEMNWANDLNVKAIHTYMANTANTVYPFAGSIDDL 672
Query: 60 KT-----------QDIPDHDVLLAGFPCQPFSQ 81
+T + D + G PC FS+
Sbjct: 673 QTLALQGKFSKKVPPVGSVDFVSGGSPCPGFSR 705
>gi|71064975|ref|YP_263702.1| C-5 cytosine-specific DNA methylase [Psychrobacter arcticus
273-4]
gi|71037960|gb|AAZ18268.1| probable C-5 cytosine-specific DNA methylase [Psychrobacter
arcticus 273-4]
Length = 520
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49
+K +LF G GG+ L L+ E +E++P + +TY NF N
Sbjct: 1 MKYIELFAGCGGLSLGLQ----AVGFENIMVNELSPMAGETYAYNFYN 44
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 68 DVLLAGFPCQPFSQAG 83
DV+ G PCQ FS AG
Sbjct: 131 DVVSGGPPCQSFSMAG 146
>gi|311109928|ref|YP_003982779.1| C-5 cytosine-specific DNA methylase 2 [Achromobacter xylosoxidans
A8]
gi|310764617|gb|ADP20064.1| C-5 cytosine-specific DNA methylase 2 [Achromobacter xylosoxidans
A8]
Length = 652
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIAKI 59
I D F G GG LEQ F + +P ++ + DI I
Sbjct: 66 IIDNFAGGGGTSEGLEQAFGRP---VDIAINHDPAAICLHAINHPWTKHYCESVWDIDPI 122
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
K ++ C+ FS+A
Sbjct: 123 KVTGNRPVGLVWLSPDCRHFSKA 145
>gi|172088105|ref|NP_001003963.2| DNA (cytosine-5)-methyltransferase 3B isoform 4 [Mus musculus]
gi|21655121|gb|AAL85481.1| DNA cytosine methyltransferase 3b6 [Mus musculus]
gi|123234594|emb|CAM27221.1| DNA methyltransferase 3B [Mus musculus]
gi|148674087|gb|EDL06034.1| mCG10465, isoform CRA_c [Mus musculus]
gi|148674092|gb|EDL06039.1| mCG10465, isoform CRA_c [Mus musculus]
Length = 796
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ I
Sbjct: 581 IRVLSLFDGIATGYLVLKELG--IKVEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 638
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 639 KKNIEEWGPFDLVIGGSPCNDLSN 662
>gi|303290208|ref|XP_003064391.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453989|gb|EEH51296.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1005
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 5/75 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK+ LF G G + L Q E +E +P + + A F D A +
Sbjct: 11 LKVASLFSGCGVLDYGLTQA----GHEIVLQTESDPDAREVLAARFQGICQPTDPATV-E 65
Query: 62 QDIPDHDVLLAGFPC 76
PD DVL A C
Sbjct: 66 CLPPDADVLAASVVC 80
>gi|332243317|ref|XP_003270826.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Nomascus
leucogenys]
Length = 891
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 613 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 670
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 671 QKHIQEWGPFDLVIGGSPCNDLSI 694
>gi|8347126|gb|AAF74518.1|AF151972_1 DNA cytosine-specific methyltransferase isoform 4 [Mus musculus]
gi|8347135|gb|AAF74521.1|AF151975_1 DNA cytosine-specific methyltransferase isoform 7 [Mus musculus]
Length = 796
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ I
Sbjct: 581 IRVLSLFDGIATGYLVLKELG--IKVEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 638
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 639 KKNIEEWGPFDLVIGGSPCNDLSN 662
>gi|85094494|ref|XP_959891.1| hypothetical protein NCU02247 [Neurospora crassa OR74A]
gi|13936826|gb|AAK49954.1|AF348971_1 DNA methyltransferase Dim-2 [Neurospora crassa]
gi|28921348|gb|EAA30655.1| predicted protein [Neurospora crassa OR74A]
Length = 1454
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 18/95 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
L+ DL+CG G LE+ VE ++++I ++ TY AN P+
Sbjct: 840 LRGMDLYCGGGNFGRGLEEGGV---VEMRWANDIWDKAIHTYMANTPDPNKTNPFLGSVD 896
Query: 57 ----------AKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ D + AG PC FS
Sbjct: 897 DLLRLALEGKFSDNVPRPGEVDFIAAGSPCPGFSL 931
>gi|300704573|ref|YP_003746176.1| DNA (cytosine-5-)-methyltransferase [Ralstonia solanacearum
CFBP2957]
gi|299072237|emb|CBJ43569.1| DNA (cytosine-5-)-methyltransferase [Ralstonia solanacearum
CFBP2957]
Length = 621
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I DLF G GG+ +E + + +++ ++AN P T + ++
Sbjct: 15 IVDLFAGGGGMSTAIEMA---LGRHVDIAINHDADAIEMHKANHPQTKHYCSDVFEVCPR 71
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ L C FSQA
Sbjct: 72 EATQGRPVGHLHGSPDCTHFSQA 94
>gi|331703222|ref|YP_004399909.1| cytosine specific DNA methyltransferase Sau96I [Mycoplasma
mycoides subsp. capri LC str. 95010]
gi|328801777|emb|CBW53930.1| Cytosine specific DNA methyltransferase Sau96I [Mycoplasma
mycoides subsp. capri LC str. 95010]
Length = 342
Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 33/91 (36%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIK 60
K +LF L E E + +V+T +IF D+ K+
Sbjct: 5 YKSIELF----AGAGGLALGLEQAGFEHIGLVEFDKQAVETLKFNRPNWNIIFEDVQKVS 60
Query: 61 TQDIPDH--------DVLLAGFPCQPFSQAG 83
+D+ D+L G PCQ FS AG
Sbjct: 61 QRDLKKEFNLKERELDLLSGGAPCQSFSYAG 91
>gi|172088103|ref|NP_034198.3| DNA (cytosine-5)-methyltransferase 3B isoform 3 [Mus musculus]
gi|6449474|gb|AAC40180.2| DNA cytosine-5 methyltransferase 3B3 [Mus musculus]
gi|123234596|emb|CAM27223.1| DNA methyltransferase 3B [Mus musculus]
gi|148674085|gb|EDL06032.1| mCG10465, isoform CRA_a [Mus musculus]
gi|148674088|gb|EDL06035.1| mCG10465, isoform CRA_a [Mus musculus]
Length = 776
Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ I
Sbjct: 561 IRVLSLFDGIATGYLVLKELG--IKVEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 618
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 619 KKNIEEWGPFDLVIGGSPCNDLSN 642
>gi|154247625|ref|YP_001418583.1| C-5 cytosine-specific DNA methylase [Xanthobacter autotrophicus
Py2]
gi|154161710|gb|ABS68926.1| C-5 cytosine-specific DNA methylase [Xanthobacter autotrophicus
Py2]
Length = 579
Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 9/85 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK 60
+ + LF G+GG LE+ + +P +V ++ P+T D+ +
Sbjct: 11 ITVV-LFAGMGGGCDGLEEA----GFHVHVAINHDPVAVAVHERRHPHTKHLRCDVFEAD 65
Query: 61 TQDIPDHDV---LLAGFPCQPFSQA 82
+++ L A C FS A
Sbjct: 66 PREVCRGRGVRALHASPDCTHFSVA 90
>gi|332358649|gb|EGJ36472.1| adenine/cytosine DNA methyltransferase [Streptococcus sanguinis
SK355]
Length = 387
Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 32/101 (31%), Gaps = 26/101 (25%)
Query: 2 LKITDLFC--GIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI--- 56
+ LF GIG F EC SSE+ ++ +AN G I
Sbjct: 1 MNYISLFSSSGIGC------YGFKEEGFECIASSELIERRLEVQKANNKLKYDDGYILGD 54
Query: 57 ---------------AKIKTQDIPDHDVLLAGFPCQPFSQA 82
K + + DV++ PCQ S A
Sbjct: 55 ITDEIVKQNLFDAVENFKKRKKQEEVDVIIFTAPCQGMSVA 95
>gi|8347123|gb|AAF74517.1|AF151971_1 DNA cytosine-specific methyltransferase isoform 3 [Mus musculus]
gi|8347137|gb|AAF74522.1|AF151976_1 DNA cytosine-specific methyltransferase isoform 8 [Mus musculus]
Length = 776
Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ I
Sbjct: 561 IRVLSLFDGIATGYLVLKELG--IKVEKYIASEVCAESIAVGTVKHEGQIKYVNDVRKIT 618
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 619 KKNIEEWGPFDLVIGGSPCNDLSN 642
>gi|115470907|ref|NP_001059052.1| Os07g0182900 [Oryza sativa Japonica Group]
gi|113610588|dbj|BAF20966.1| Os07g0182900 [Oryza sativa Japonica Group]
Length = 445
Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 27/110 (24%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKIK 60
D+F G GG+ L+Q ++ E + K + I K
Sbjct: 12 LDIFAGCGGLSEGLQQAGVSF---TKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 68
Query: 61 TQDIPDHD------------------------------VLLAGFPCQPFS 80
D D + G PCQ FS
Sbjct: 69 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFS 118
>gi|330932388|ref|XP_003303757.1| hypothetical protein PTT_16100 [Pyrenophora teres f. teres 0-1]
gi|311320036|gb|EFQ88154.1| hypothetical protein PTT_16100 [Pyrenophora teres f. teres 0-1]
Length = 762
Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 9/84 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDIAK 58
D+FCG GG Q + + + ++KTY+ N +K
Sbjct: 314 FGDVFCGAGGASQGALQAGYAIG----WGLDSDHTALKTYKLNHPTAQTFKMDAHDFSSK 369
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQA 82
DVL PC +S A
Sbjct: 370 DVCPKRWRVDVLHLSPPCCYWSPA 393
>gi|300728104|ref|ZP_07061476.1| C-5 cytosine-specific DNA methylase [Prevotella bryantii B14]
gi|299774618|gb|EFI71238.1| C-5 cytosine-specific DNA methylase [Prevotella bryantii B14]
Length = 382
Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 11/87 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------TLIFGDIAK 58
LF +G +E + V ++E++ + Y+ PN + +I
Sbjct: 10 LSLFSNVGVAEAGIE---KNNQVSIVLANELDHKRCEFYKCVHPNTKVIEGDITKDEIRD 66
Query: 59 IKTQDIPDHDV--LLAGFPCQPFSQAG 83
++ +V +LA PCQ S+AG
Sbjct: 67 TIVEEAKSLNVNFVLATPPCQGMSEAG 93
>gi|326935591|ref|XP_003213853.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like, partial
[Meleagris gallopavo]
Length = 698
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ ++
Sbjct: 420 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRNVT 477
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 478 QKHIQEWGPFDLVIGGSPCNDLSI 501
>gi|75906954|ref|YP_321250.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
gi|75700679|gb|ABA20355.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
Length = 385
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 26/105 (24%), Gaps = 29/105 (27%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I F G G + L E + + +EI + Y+ + + D
Sbjct: 7 IFSFFAGSGLLDLGFETS----GFNIVYVNEIFSPFMAAYRYSREILNLPTPQYGYYQGD 62
Query: 64 I-------------------------PDHDVLLAGFPCQPFSQAG 83
+ + G PC FS G
Sbjct: 63 TADVSKLVEGFPAKRLLDLVQDCRKSNNIVGFIGGPPCPDFSIGG 107
>gi|119383017|ref|YP_914073.1| DNA-cytosine methyltransferase [Paracoccus denitrificans PD1222]
gi|119372784|gb|ABL68377.1| DNA-cytosine methyltransferase [Paracoccus denitrificans PD1222]
Length = 555
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 29/119 (24%), Gaps = 41/119 (34%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP------------- 48
L + GI + + SEI P+ F
Sbjct: 4 LSFLSVCSGI----EAASLAWEPLGWKAIGYSEIEPFPCHVLHHRFGAGRPIFMPAPDEA 59
Query: 49 ------------------------NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
FGD+ + DVL+ G PCQ +S AG
Sbjct: 60 GLSAKDRKARAAAIRAVAKLPEVGRVPNFGDMTQFDRWPDAAFDVLVGGTPCQDYSVAG 118
>gi|159490457|ref|XP_001703193.1| DNA methyltransferase [Chlamydomonas reinhardtii]
gi|158270733|gb|EDO96569.1| DNA methyltransferase [Chlamydomonas reinhardtii]
Length = 539
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 6/85 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRN----VECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58
+I DL+ G+G + L + V+ + +IN + Y D+ +
Sbjct: 31 RILDLYSGVGCLHAALGRPGVLPPGCTQVQVAAAVDINTAANAVYAVEHGTEPRALDLTR 90
Query: 59 IKTQ--DIPDHDVLLAGFPCQPFSQ 81
+ D DV L PCQP++
Sbjct: 91 VTAAQLDALCADVWLLTPPCQPYTT 115
>gi|157786471|ref|YP_001491648.1| Putative DNA methylase [Mycobacterium phage U2]
gi|40769391|gb|AAR89717.1| gp77 [Mycobacterium phage U2]
Length = 223
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 24/76 (31%), Gaps = 10/76 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLFCG GG + H +INP +
Sbjct: 4 RLLDLFCGAGGAGRGYQLAGFH-----VTGVDINPQPNYAGDEFVQGDALEYL-----DA 53
Query: 63 DIPDHDVLLAGFPCQP 78
+ DV+ A PCQ
Sbjct: 54 HGHEFDVIHASPPCQS 69
>gi|306829493|ref|ZP_07462683.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis ATCC 6249]
gi|304428579|gb|EFM31669.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis ATCC 6249]
Length = 450
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 12/90 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
+ LF G E F + ++E+ P V+ Y+ +PN +F
Sbjct: 69 FRGISLFASAG----VAETYFEKHGIHVKVAAELLPERVRIYKHLYPNVNVFQGDLTDKE 124
Query: 55 -DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
IK D L+A PCQ S AG
Sbjct: 125 VYDEVIKAAIDEKCDFLIATPPCQGMSTAG 154
>gi|17231665|ref|NP_488213.1| cytosine-specific DNA methyltransferase [Nostoc sp. PCC 7120]
gi|8453097|gb|AAF75232.1|AF220508_2 cytosine-specific DNA methyltransferase [Nostoc sp. PCC 7120]
gi|17133308|dbj|BAB75872.1| cytosine-specific DNA methyltransferase [Nostoc sp. PCC 7120]
Length = 385
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 29/107 (27%), Gaps = 33/107 (30%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ F G G + L E + + +EI +S + ++ +++
Sbjct: 7 VFSFFAGSGFLDLGFETS----GFNIVYVNEI--FSPFMAAYRYLREILNLPLSEYGYYQ 60
Query: 64 IPDHDV---------------------------LLAGFPCQPFSQAG 83
DV + G PC FS G
Sbjct: 61 GDTADVSKLVEGFPGKYLLDWVQECRKSNNIVGFIGGPPCPDFSIGG 107
>gi|323448404|gb|EGB04303.1| hypothetical protein AURANDRAFT_67350 [Aureococcus anophagefferens]
Length = 1846
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 30/95 (31%), Gaps = 14/95 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFP----------- 48
+++ + GIGG L++ + + + + S + ++ FP
Sbjct: 1266 IQVIVFYSGIGGFDKGLQRAWEKHGAAFKVVLAIDNCELSNEIHRNTFPGVTVVNHILGK 1325
Query: 49 -NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
I++ ++ A C S A
Sbjct: 1326 SFKATMDLISEYIPREQWSSMYWHASPSCIEGSTA 1360
>gi|148674093|gb|EDL06040.1| mCG140755 [Mus musculus]
Length = 637
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L++ VE + +SE+ S+ ++ +I
Sbjct: 422 IRVLSLFDGIATGYLVLKELG--IKVEKYIASEVCAESIAVGTVKHEGQIKYVDDIRNIT 479
Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80
K + D+++ G PC S
Sbjct: 480 KEHIDEWGPFDLVIGGSPCNDLS 502
>gi|38505643|ref|NP_942264.1| hypothetical protein ssl5108 [Synechocystis sp. PCC 6803]
gi|38423667|dbj|BAD01878.1| unknown protein [Synechocystis sp. PCC 6803]
Length = 75
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49
LK DLF G GG L EQT ++ EI+P Q ++P
Sbjct: 9 LKHLDLFAGCGGFTLAAEQTGGK--IQTTQFVEIDPDCHAILQHHWPQ 54
>gi|297194174|ref|ZP_06911572.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|297152145|gb|EFH31550.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
Length = 492
Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Query: 20 QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPF 79
+ E + + T GD+ + + P VL G PCQ F
Sbjct: 1 MAAHVLGYRTTG-IEWDAGACTTRNEA-GMDTFKGDVRQYRAALFPLAQVLTGGPPCQTF 58
Query: 80 SQAG 83
+ AG
Sbjct: 59 TVAG 62
>gi|262279847|ref|ZP_06057632.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus
RUH2202]
gi|262260198|gb|EEY78931.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus
RUH2202]
Length = 555
Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIAKI 59
I D F G GG LE N + NP ++ ++AN P+ + + +
Sbjct: 24 IVDFFAGGGGASTGLEMGLNRP---VHVAVNHNPKAIAMHEANHPHAKHYVQDVFAVDPV 80
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ D A C SQA
Sbjct: 81 EICDGYQVGWFHASPDCTHHSQA 103
>gi|300868938|ref|ZP_07113543.1| putative modification methylase NmeDIP [Oscillatoria sp. PCC 6506]
gi|300333061|emb|CBN58735.1| putative modification methylase NmeDIP [Oscillatoria sp. PCC 6506]
Length = 399
Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 35/105 (33%), Gaps = 29/105 (27%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-------- 55
I F G G + L E + + + +EI ++ Y+ + +
Sbjct: 7 IFSFFAGSGFLDLGFELS----GFKIAYINEIFSPFMQAYRYSRKCLNLPLPEYGYSEGE 62
Query: 56 ---------------IAKIKTQDIPDHDVL--LAGFPCQPFSQAG 83
+ ++ ++D++ +AG PC FS G
Sbjct: 63 EADVTRLTAGEAALKLRELMQDARKNNDIIGFIAGPPCPDFSVGG 107
>gi|237839183|ref|XP_002368889.1| hypothetical protein TGME49_034490 [Toxoplasma gondii ME49]
gi|211966553|gb|EEB01749.1| hypothetical protein TGME49_034490 [Toxoplasma gondii ME49]
Length = 754
Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
+ DLFCGIG L ++ ++ + N +
Sbjct: 488 TVVDLFCGIGYFSLAALTCAGADKLKHLYACDWNQDA 524
>gi|299771250|ref|YP_003733276.1| putative C-5 cytosine-specific DNA methylase [Acinetobacter sp.
DR1]
gi|298701338|gb|ADI91903.1| putative C-5 cytosine-specific DNA methylase [Acinetobacter sp.
DR1]
Length = 553
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----IAKI 59
I D F G GG LE N + NP ++ ++AN P+ + + +
Sbjct: 24 IVDFFAGGGGASTGLEMGLNRP---VHVAVNHNPKAISMHEANHPHAKHYVQDVFVVDPV 80
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ D A C SQA
Sbjct: 81 EICDGYQVGWFHASPDCTHHSQA 103
>gi|254875583|ref|ZP_05248293.1| predicted protein [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254841582|gb|EET20018.1| predicted protein [Francisella tularensis subsp. tularensis
MA00-2987]
Length = 72
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49
F G GG+ L E+ + +++E + +TY+ N PN
Sbjct: 13 FFSGAGGLDLGFERA----GFDIIWANEFDKEIWETYEKNHPN 51
>gi|221507944|gb|EEE33531.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 754
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
+ DLFCGIG L ++ ++ + N +
Sbjct: 488 TVVDLFCGIGYFSLAALTCAGADKLKHLYACDWNQDA 524
>gi|208964726|gb|ACI31553.1| MET1 [Nicotiana benthamiana]
Length = 227
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 32/110 (29%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63
D+F G GG+ L+++ + ++ E + ++ N P +F + +
Sbjct: 21 LDIFAGCGGLSEGLQRSGVS---DTKWAIEYEEPAGDAFKLNHPEAEVFIQNCNVFLRAV 77
Query: 64 ---------------------------------IPDHDVLLAGFPCQPFS 80
D + G PCQ FS
Sbjct: 78 MQKCGDAEDCISTPEASELAAAMDENELNSLPLPGQVDFINGGPPCQGFS 127
>gi|192823897|ref|YP_001994815.1| gp84 [Mycobacterium phage DD5]
gi|192824173|ref|YP_001994728.1| gp87 [Mycobacterium phage Lockley]
gi|190610403|gb|ACE79924.1| gp87 [Mycobacterium phage Lockley]
gi|190610675|gb|ACE80193.1| gp84 [Mycobacterium phage DD5]
Length = 223
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 24/76 (31%), Gaps = 10/76 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLFCG GG + H +INP +
Sbjct: 4 RLLDLFCGAGGAGRGYQLAGFH-----VTGVDINPQPNYAGDEFVQGDALEYL-----DA 53
Query: 63 DIPDHDVLLAGFPCQP 78
+ DV+ A PCQ
Sbjct: 54 HGHEFDVIHASPPCQS 69
>gi|221483474|gb|EEE21793.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 754
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
+ DLFCGIG L ++ ++ + N +
Sbjct: 488 TVVDLFCGIGYFSLAALTCAGADKLKHLYACDWNQDA 524
>gi|309378580|emb|CBX22758.1| DNA cytosine methyltransferase M.NlaIV [Neisseria lactamica
Y92-1009]
Length = 380
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 45 ANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
N+P+ + +GDI KI+T DIPD D+LLAGFPCQ FS AG
Sbjct: 6 QNYPDEVPYGDIPKIETGDIPDFDILLAGFPCQAFSFAG 44
>gi|38505857|ref|NP_942475.1| hypothetical protein ssr6032 [Synechocystis sp. PCC 6803]
gi|38423881|dbj|BAD02089.1| ssr6032 [Synechocystis sp. PCC 6803]
Length = 72
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49
LK DLF G GG L EQT ++ EI+P Q ++P
Sbjct: 10 LKHLDLFAGCGGFTLAAEQT--RGKIQTTQFVEIDPDCHTILQHHWPQ 55
>gi|313665138|ref|YP_004047009.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma leachii PG50]
gi|312949950|gb|ADR24546.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma leachii PG50]
Length = 342
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 32/91 (35%), Gaps = 13/91 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52
K +LF L E E + +V+T + N PN I
Sbjct: 5 YKSIELF----AGAGGLALGLEQAGFEHIGLVEFDKQAVETLKFNRPNWNIIFEDVQKAS 60
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
D+ K + D+L G PCQ FS AG
Sbjct: 61 QRDLKKEFNLKERELDLLSGGAPCQSFSYAG 91
>gi|327287014|ref|XP_003228224.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Anolis
carolinensis]
gi|289657686|gb|ADD14584.1| DNA methyltransferase 3A [Anolis carolinensis]
Length = 689
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ ++
Sbjct: 411 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRNVT 468
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 469 QKHIQEWGPFDLVIGGSPCNDLSI 492
>gi|254419546|ref|ZP_05033270.1| C-5 cytosine-specific DNA methylase superfamily [Brevundimonas
sp. BAL3]
gi|196185723|gb|EDX80699.1| C-5 cytosine-specific DNA methylase superfamily [Brevundimonas
sp. BAL3]
Length = 388
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 23 NHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFS 80
V+ F+++++P + GD+ ++ D+P D+ A PCQ S
Sbjct: 30 RWAGVDTVFANDMDPAKGRAFVANHPDIRFHLGDVWSLRPADLPGAPDLAWASSPCQDVS 89
Query: 81 QAG 83
AG
Sbjct: 90 LAG 92
>gi|296482345|gb|DAA24460.1| DNA (cytosine-5-)-methyltransferase 3 alpha [Bos taurus]
Length = 723
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 445 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 502
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 503 QKHIQEWGPFDLVIGGSPCNDLSI 526
>gi|47229157|emb|CAG03909.1| unnamed protein product [Tetraodon nigroviridis]
Length = 628
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
+++ LF GI L L +E + +SEI S + ++ +
Sbjct: 314 IRVLSLFDGIATGYLVLRDLGFR--IERYIASEICEDSIAVGMVKHEGKIEYVNDVRTVT 371
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K + D+L+ G PC S
Sbjct: 372 KKHLAEWGPFDLLIGGSPCNDLSM 395
>gi|270293678|ref|ZP_06199880.1| cytosine-specific methyltransferase [Bacteroides sp. D20]
gi|270275145|gb|EFA21005.1| cytosine-specific methyltransferase [Bacteroides sp. D20]
Length = 361
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 25 RNVECFFSSEINPYSVKTYQANFPN-TLIFGDIAKIKTQDIPDHD----VLLAGFPCQPF 79
++ ++ E+NP++ K+++ N +I GDI +K D + D +++ G PCQ F
Sbjct: 22 AGIKVRYAIEVNPHAAKSFELNHKGAKVICGDIRDVKATDFLNKDEEVFIIMGGPPCQGF 81
Query: 80 SQ 81
S
Sbjct: 82 SM 83
>gi|149050844|gb|EDM03017.1| DNA methyltransferase 3A [Rattus norvegicus]
Length = 728
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 450 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 507
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 508 QKHIQEWGPFDLVIGGSPCNDLSI 531
>gi|270292955|ref|ZP_06199166.1| conserved hypothetical protein [Streptococcus sp. M143]
gi|270278934|gb|EFA24780.1| conserved hypothetical protein [Streptococcus sp. M143]
Length = 95
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 4/69 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
I DLF G GG+ E + + +++T+Q N N+ I +
Sbjct: 4 YNIVDLFSGAGGLSYGFEMA----RFNVLLGIDNDEKALETFQKNHQNSEILCGDITNIS 59
Query: 62 QDIPDHDVL 70
+ ++
Sbjct: 60 YEKDIKPII 68
>gi|87121096|ref|ZP_01076987.1| modification methylase (Cytosine-specific methyltransferase)
[Marinomonas sp. MED121]
gi|86163588|gb|EAQ64862.1| modification methylase (Cytosine-specific methyltransferase)
[Marinomonas sp. MED121]
Length = 513
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 32/134 (23%), Gaps = 54/134 (40%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSV--------------KTYQAN 46
+ DLF G GG+ + + S E P + N
Sbjct: 8 VIDLFAGPGGLGEGISSYVGDNGLKPFQIGVSVEKEPSAHRTLTTRAFFRKIADNPDSCN 67
Query: 47 FPNTLIFGDIAKIKTQD-------------------------------------IPDHDV 69
+ G I + + + V
Sbjct: 68 DYYDYVKGHITRDQLFELHPKESQAAIEETLNGPKALGVDNELIHERIRTLTSSHKGPTV 127
Query: 70 LLAGFPCQPFSQAG 83
++ G PCQ +S AG
Sbjct: 128 VIGGPPCQAYSLAG 141
>gi|296224354|ref|XP_002758031.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Callithrix
jacchus]
Length = 723
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 445 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 502
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 503 QKHIQEWGPFDLVIGGSPCNDLSI 526
>gi|109102239|ref|XP_001083358.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A isoform 2 [Macaca
mulatta]
Length = 723
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 445 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 502
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 503 QKHIQEWGPFDLVIGGSPCNDLSI 526
>gi|77176455|ref|NP_715640.2| DNA (cytosine-5)-methyltransferase 3A isoform b [Homo sapiens]
gi|114576490|ref|XP_001148731.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A isoform 5 [Pan
troglodytes]
Length = 723
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 445 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 502
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 503 QKHIQEWGPFDLVIGGSPCNDLSI 526
>gi|260221752|emb|CBA30630.1| hypothetical protein Csp_C24510 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 515
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 18/53 (33%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54
K+ DLF G GG+ + E S+E+ + KT
Sbjct: 3 YKVIDLFAGPGGLGEGFASLKEGKAFEIVISAEMEESAHKTLTLRSYFRHAKC 55
>gi|328948618|ref|YP_004365955.1| C-5 cytosine-specific DNA methylase [Treponema succinifaciens DSM
2489]
gi|328448942|gb|AEB14658.1| C-5 cytosine-specific DNA methylase [Treponema succinifaciens DSM
2489]
Length = 94
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 5/81 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFS--SEINPYSVKTYQANFPNTLIFGDIAKI 59
L I D+FCG GG L + + N + S + + ++ I
Sbjct: 4 LNIVDMFCGGGGESTGLIEAAHDYNFDVNMSAINHWERAIETHSKNYPFAEHRCENVQHI 63
Query: 60 KTQD---IPDHDVLLAGFPCQ 77
+ Q + D++ A CQ
Sbjct: 64 QPQTLKASKNTDLMWASPGCQ 84
>gi|119714083|ref|YP_919225.1| C-5 cytosine-specific DNA methylase [Nocardioides sp. JS614]
gi|119525992|gb|ABL79362.1| C-5 cytosine-specific DNA methylase [Nocardioides sp. JS614]
Length = 615
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 26/84 (30%), Gaps = 9/84 (10%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
DLF G GG+ +E+ ++ + D+ + D
Sbjct: 22 GDLFSGFGGLTQGIERAGFTA---IVAANHNEYKVKVHEANHPHVEHWIADLVDPDSSDY 78
Query: 65 ------PDHDVLLAGFPCQPFSQA 82
P D+L AG C S A
Sbjct: 79 HSVRELPPVDLLAAGVSCVNHSPA 102
>gi|265756302|ref|ZP_06090631.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263233893|gb|EEZ19502.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 589
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 15/94 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
+ DLFCG GG+ +E+ N + + ++ ++ AN P+ L F +
Sbjct: 1 MIDLFCGAGGLSEGVEEARLDGNRCAKVVCCVNHDKNAILSHDANIPDALHFIEDIRTLE 60
Query: 56 -------IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ +I+ +L A C FS+A
Sbjct: 61 LSPISTIVERIRQLYPDAMIMLHASLECTNFSKA 94
>gi|149030964|gb|EDL85991.1| rCG37512 [Rattus norvegicus]
Length = 461
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF GI L L+ VE + +SE+ S+ ++ +IA
Sbjct: 246 IRVLSLFDGIATGYLVLKDLGIK--VEKYVASEVCADSIAVGTIKHEGQIKYVDDIQNIA 303
Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80
K + D+++ G PC S
Sbjct: 304 KEHIDEWGPFDLVIGGSPCNDLS 326
>gi|13477024|ref|NP_108594.1| modification methylase [Mesorhizobium loti MAFF303099]
gi|14027787|dbj|BAB54380.1| modification methylase [Mesorhizobium loti MAFF303099]
Length = 667
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 25/85 (29%), Gaps = 9/85 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ I LF G+GG LE + +P +V ++ +T
Sbjct: 27 MTIV-LFAGMGGGCDGLEDA----GFHVHVAINHDPVAVAVHEKRHQHTRHLRCDVFEAD 81
Query: 62 QDI----PDHDVLLAGFPCQPFSQA 82
L A C FS A
Sbjct: 82 PRKVTGGRGVRALHASPDCTHFSVA 106
>gi|325126553|gb|ADY85883.1| DNA-cytosine methyltransferase family protein [Lactobacillus
delbrueckii subsp. bulgaricus 2038]
Length = 380
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 8/70 (11%)
Query: 22 FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI--------PDHDVLLAG 73
+++E +P +V+TY+ N N + + + D L+ G
Sbjct: 29 GVEWGFTHAWANEYDPDTVETYKLNILNDPDAKTVYCEDVRKFNLDDDEKLGNIDALIFG 88
Query: 74 FPCQPFSQAG 83
FPC +S G
Sbjct: 89 FPCNDYSVVG 98
>gi|119773422|ref|YP_926162.1| modification methylase (cytosine-specific methyltransferase
[Shewanella amazonensis SB2B]
gi|119765922|gb|ABL98492.1| modification methylase (cytosine-specific methyltransferase
[Shewanella amazonensis SB2B]
Length = 520
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 35/132 (26%), Gaps = 52/132 (39%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIA 57
+++ DLF G GG+ R + S+E++P++ + + ++
Sbjct: 6 IQVVDLFAGPGGLGEGFSS--VDRTFQILVSAEMDPFAHQTLRLRAFYRLISNHAPNELD 63
Query: 58 KIKTQDIPDHD----------------------------------------------VLL 71
D VL+
Sbjct: 64 DYFAFCNGVSDKPYSSETESLWEDAGEEALQIVLGSEDGNARLDSAIKKGLNKDAPWVLI 123
Query: 72 AGFPCQPFSQAG 83
G PCQ +S G
Sbjct: 124 GGPPCQAYSMVG 135
>gi|148222543|ref|NP_001090906.1| DNA (cytosine-5)-methyltransferase 3A [Sus scrofa]
gi|110559302|gb|ABG75907.1| DNA methyltransferase 3a2 [Sus scrofa]
Length = 689
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 411 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 468
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 469 QKHIQEWGPFDLVIGGSPCNDLSI 492
>gi|23954438|gb|AAN40037.1|AF480163_1 DNA cytosine methyltransferase 3A2 [Homo sapiens]
Length = 689
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 411 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 468
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 469 QKHIQEWGPFDLVIGGSPCNDLSI 492
>gi|47221238|emb|CAG13174.1| unnamed protein product [Tetraodon nigroviridis]
Length = 835
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L++ V+ + +SE+ S+ +++ +
Sbjct: 552 IRVLSLFDGIATGLLVLKELGIE--VDRYVASEVCEDSITLGFVRHQGRIMYVGDVRGVT 609
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 610 RKHIQEWGPFDLVIGGSPCNDLSI 633
>gi|51556265|ref|NP_001003957.1| DNA (cytosine-5)-methyltransferase 3A isoform 2 [Rattus norvegicus]
gi|50539391|tpe|CAE52318.1| TPA: putative DNA (cytosine-5) methyltransferase 3a2 [Rattus
norvegicus]
Length = 689
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 411 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 468
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 469 QKHIQEWGPFDLVIGGSPCNDLSI 492
>gi|24371231|ref|NP_714965.1| DNA (cytosine-5)-methyltransferase 3A isoform 2 [Mus musculus]
gi|23954440|gb|AAN40038.1|AF480164_1 DNA cytosine methyltransferase 3A2 [Mus musculus]
gi|74180540|dbj|BAE34200.1| unnamed protein product [Mus musculus]
gi|148669441|gb|EDL01388.1| DNA methyltransferase 3A, isoform CRA_b [Mus musculus]
Length = 689
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 411 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 468
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 469 QKHIQEWGPFDLVIGGSPCNDLSI 492
>gi|306829494|ref|ZP_07462684.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis ATCC
6249]
gi|304428580|gb|EFM31670.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis ATCC
6249]
Length = 389
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 32/89 (35%), Gaps = 12/89 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-NPYSVKTYQANFPNTLIFGDIAKIKT 61
K LF +G E + V+ ++E+ ++I GDI +
Sbjct: 11 KALSLFSNVG----IAETYLSDVGVDVCVANELLEERCRFYSHLYPDVSIIQGDITDSEV 66
Query: 62 QDIPD-------HDVLLAGFPCQPFSQAG 83
D ++++A PCQ S AG
Sbjct: 67 FDKVMLTAKEAGVEMVIATPPCQGMSNAG 95
>gi|315054007|ref|XP_003176378.1| hypothetical protein MGYG_00467 [Arthroderma gypseum CBS 118893]
gi|311338224|gb|EFQ97426.1| hypothetical protein MGYG_00467 [Arthroderma gypseum CBS 118893]
Length = 1091
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 18/96 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-------------NPYSVKTYQANFP 48
LK +LF G G LE +E ++ E + + + +
Sbjct: 633 LKALNLFSGGGTFDRGLE---EGTAIESKWAVEWGLQQMLTYRANHPDGKGLNLFCGSVN 689
Query: 49 NTLIFGDIAKIKTQDIPDHDV--LLAGFPCQPFSQA 82
+ L + DV + AG PCQ +S A
Sbjct: 690 DYLSQAFRGEEHEYIAGIGDVHFISAGSPCQGYSTA 725
>gi|114576494|ref|XP_001148525.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha
isoform 2 [Pan troglodytes]
Length = 594
Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 316 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 373
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 374 QKHIQEWGPFDLVIGGSPCNDLSI 397
>gi|258568064|ref|XP_002584776.1| predicted protein [Uncinocarpus reesii 1704]
gi|237906222|gb|EEP80623.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1033
Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 18/96 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ +LF G G LE + ++ E + TY+AN ++
Sbjct: 584 LRALNLFSGGGSFDRGLE---EGTAIRSEWAVEWGLDQMLTYRANHESSHDLKLFRGSVN 640
Query: 62 Q---------------DIPDHDVLLAGFPCQPFSQA 82
+ + + G PCQ +S A
Sbjct: 641 DYLALALKGDKSDLIAKLGQVEFISGGSPCQGYSLA 676
>gi|310830858|ref|YP_003965959.1| Modification methylase PspPI [Paenibacillus polymyxa SC2]
gi|309250325|gb|ADO59891.1| Modification methylase PspPI [Paenibacillus polymyxa SC2]
Length = 443
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 11/88 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-------NPYSVKTYQANFPNTLIFG 54
L+ G G +++ E + E + +S + + + +
Sbjct: 123 LRTITFCAGAGISSECMKKA----GFEEVAAVEWNPKEGSEDKFSDIYLENHPESVMFNI 178
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ ++K D+P +V LA C FS+A
Sbjct: 179 PMQQLKASDLPHAEVWLATLDCSDFSKA 206
>gi|114576492|ref|XP_001148587.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha
isoform 3 [Pan troglodytes]
Length = 598
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 320 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 377
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 378 QKHIQEWGPFDLVIGGSPCNDLSI 401
>gi|38505603|ref|NP_942224.1| hypothetical protein ssl5068 [Synechocystis sp. PCC 6803]
gi|38423627|dbj|BAD01838.1| unknown protein [Synechocystis sp. PCC 6803]
Length = 75
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49
LK DLF G GG L EQT ++ EI+P Q ++P
Sbjct: 9 LKHLDLFAGCGGFTLAAEQT--RGKIQTTQFVEIDPDCHAILQHHWPQ 54
>gi|312213040|emb|CBX93122.1| hypothetical protein [Leptosphaeria maculans]
Length = 757
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 30/86 (34%), Gaps = 9/86 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
I D+FCG GG Q H + +++ +++ Y+ N P F A
Sbjct: 329 YTIGDVFCGFGGASQGAAQAGLH----VAWGLDVDQQALRAYKMNHPGASGFLCNAHDFP 384
Query: 62 QDIPDH-----DVLLAGFPCQPFSQA 82
VL PC FS A
Sbjct: 385 PPGKTKEELRVHVLHLSPPCCFFSPA 410
>gi|289810948|ref|ZP_06541577.1| DNA cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 121
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI 35
+ DLF GIGGIR E +C F+SE
Sbjct: 92 FRFIDLFAGIGGIRRGFE----AIGGQCVFTSEW 121
>gi|116514211|ref|YP_813117.1| site-specific DNA methylase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|116093526|gb|ABJ58679.1| Site-specific DNA methylase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 380
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 8/70 (11%)
Query: 22 FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI--------PDHDVLLAG 73
+++E +P +V+TY+ N N + ++ + D L+ G
Sbjct: 29 GEKWGFAHAWANEYDPDTVETYKLNILNDPDAKTVYCEDVRNFNLDDDEKLGNIDALIFG 88
Query: 74 FPCQPFSQAG 83
FPC +S G
Sbjct: 89 FPCNDYSVVG 98
>gi|186686861|ref|YP_001870054.1| C-5 cytosine-specific DNA methylase [Nostoc punctiforme PCC 73102]
gi|186469213|gb|ACC85013.1| C-5 cytosine-specific DNA methylase [Nostoc punctiforme PCC 73102]
Length = 471
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 28/90 (31%), Gaps = 18/90 (20%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-----VKTYQANFPNTLIFGDIAKIKT 61
LF G GGI + + + + E +P + + I ++
Sbjct: 144 LFAGGGGIEAGM----VNSGIRPVIAVEFDPTKPDLSRAIALNHHHNFSEYGCRIVQLTV 199
Query: 62 QD---------IPDHDVLLAGFPCQPFSQA 82
Q+ D L A C FSQA
Sbjct: 200 QEVARLGFIGFPRRPDYLHASPVCANFSQA 229
>gi|297842789|ref|XP_002889276.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp.
lyrata]
gi|297335117|gb|EFH65535.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp.
lyrata]
Length = 876
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFP 48
DL+ G G + + V+ +S +IN ++ +++ N P
Sbjct: 222 LDLYSGCGAMSTGFCMGASIAGVKLITKWSVDINKFACDSFRHNHP 267
>gi|2766715|gb|AAB95486.1| chromomethylase [Arabidopsis arenosa]
gi|2865435|gb|AAC02671.1| chromomethylase [Arabidopsis arenosa]
Length = 744
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFP 48
DL+ G G + + V+ +S +IN ++ +++ N P
Sbjct: 212 LDLYSGCGAMSTGFCMGASIAGVKLITKWSVDINKFACDSFRHNHP 257
>gi|325190286|emb|CCA24762.1| trimethylguanosine synthase putative [Albugo laibachii Nc14]
Length = 753
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 28/78 (35%), Gaps = 10/78 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLF G GG + L QT +H + EI+P + + N + I I
Sbjct: 597 TVVDLFAGCGGNTIQLAQTCHH-----VIAIEIDPLRIHKAKHNAQVYGVSDRIEWICGD 651
Query: 63 -----DIPDHDVLLAGFP 75
DV+ P
Sbjct: 652 ALEVISRLQADVIFLSPP 669
>gi|297160040|gb|ADI09752.1| hypothetical protein SBI_06632 [Streptomyces bingchenggensis
BCW-1]
Length = 205
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 14/78 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ DL CG GG+ + + + P + + + L F
Sbjct: 10 LRVLDLCCGAGGLSMGYYLA----GFDVVG-VDNRPQPNYPFTFHQADALTFPL------ 58
Query: 62 QDIPDHDVLLAGFPCQPF 79
D++ A +PCQ F
Sbjct: 59 ---DGFDLVHASWPCQHF 73
>gi|255556520|ref|XP_002519294.1| conserved hypothetical protein [Ricinus communis]
gi|223541609|gb|EEF43158.1| conserved hypothetical protein [Ricinus communis]
Length = 678
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNH-RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+ + LF GIGG + L + H + V +SE ++ + N T I I+
Sbjct: 551 ITVLSLFSGIGGAEVALHRLGIHMKGVVSVETSETKRKILRMWWRNSGQTGELEQIEDIQ 610
Query: 61 TQDIPDHDVLL---AGFP---CQP 78
D L+ GF CQ
Sbjct: 611 KLTTKKIDRLIERFGGFDFVICQS 634
>gi|307330114|ref|ZP_07609264.1| C-5 cytosine-specific DNA methylase [Streptomyces violaceusniger
Tu 4113]
gi|306884257|gb|EFN15293.1| C-5 cytosine-specific DNA methylase [Streptomyces violaceusniger
Tu 4113]
Length = 366
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 23 NHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ N + E +FP+ G++ + + D+L AGFPCQ S A
Sbjct: 5 HVFNARTVWHCENAAAPAAVLAHHFPDVPNLGNLKAVDFTGVEGVDILAAGFPCQDVSIA 64
Query: 83 G 83
G
Sbjct: 65 G 65
>gi|162463785|ref|NP_001104978.1| DNA (cytosine-5)-methyltransferase 1 [Zea mays]
gi|75168496|sp|Q9AXT8|CMT1_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName:
Full=Chromomethylase 1; AltName: Full=DNA cytosine
methyltransferase MET2a; AltName: Full=Zea
methyltransferase2; Short=Zmet2
gi|13021690|gb|AAK11516.1|AF243043_1 DNA cytosine methyltransferase MET2a [Zea mays]
gi|260749135|gb|ACX48824.1| chromomethylase [Zea mays]
Length = 912
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 3 KITDLFCGIGGIRLDLE--QTFNHRNVECFFSSEINPYSVKTYQANFPN 49
+ DL+ G GG+ L + +E ++ + N ++ ++ + N P
Sbjct: 342 TLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQ 390
>gi|226088548|dbj|BAH37019.1| chromomethylase OsMET2a [Oryza sativa Japonica Group]
Length = 907
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 3 KITDLFCGIGGIRLDLE--QTFNHRNVECFFSSEINPYSVKTYQANFP 48
+ DL+ G GG+ L N+E ++ + N ++ ++ + N P
Sbjct: 336 TLLDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHP 383
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 12/46 (26%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
P + + D DV+ G PCQ S
Sbjct: 472 WEPIENLRDCPLKIKEFVQEGYRRKILPLPGDVDVICGGPPCQGIS 517
>gi|222612319|gb|EEE50451.1| hypothetical protein OsJ_30466 [Oryza sativa Japonica Group]
Length = 907
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 3 KITDLFCGIGGIRLDLE--QTFNHRNVECFFSSEINPYSVKTYQANFP 48
+ DL+ G GG+ L N+E ++ + N ++ ++ + N P
Sbjct: 336 TLLDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHP 383
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 12/46 (26%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
P + + D DV+ G PCQ S
Sbjct: 472 WEPIENLRDCPLKIKEFVQEGYRRKILPLPGDVDVICGGPPCQGIS 517
>gi|218188370|gb|EEC70797.1| hypothetical protein OsI_02246 [Oryza sativa Indica Group]
Length = 907
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 3 KITDLFCGIGGIRLDLE--QTFNHRNVECFFSSEINPYSVKTYQANFP 48
+ DL+ G GG+ L N+E ++ + N ++ ++ + N P
Sbjct: 336 TLLDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHP 383
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 12/46 (26%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
P + + D DV+ G PCQ S
Sbjct: 472 WEPIENLRDCPLKIKEFVQEGYRRKILPLPGDVDVICGGPPCQGIS 517
>gi|18542936|gb|AAL75761.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa
Japonica Group]
Length = 719
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 3 KITDLFCGIGGIRLDLE--QTFNHRNVECFFSSEINPYSVKTYQANFP 48
+ DL+ G GG+ L N+E ++ + N ++ ++ + N P
Sbjct: 314 TLLDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHP 361
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 12/46 (26%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
P + + D DV+ G PCQ S
Sbjct: 450 WEPIENLRDCPLKIKEFVQEGYRRKILPLPGDVDVICGGPPCQGIS 495
>gi|240145560|ref|ZP_04744161.1| putative C-5 cytosine-specific DNA methylase [Roseburia
intestinalis L1-82]
gi|257202377|gb|EEV00662.1| putative C-5 cytosine-specific DNA methylase [Roseburia
intestinalis L1-82]
Length = 586
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG +E + +P ++K ++AN + +
Sbjct: 26 IVDNFAGGGGASTGIEMA---TGYSVDIAINHDPEAIKMHKANHPNTKHYCENVWAVDPV 82
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
K + + C+ FS+A
Sbjct: 83 KACNGHPVALAWFSPDCKHFSKA 105
>gi|213581465|ref|ZP_03363291.1| DNA cytosine methylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 295
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 17/20 (85%), Positives = 18/20 (90%)
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
+P HDVLLAGFPCQPFS AG
Sbjct: 1 MPQHDVLLAGFPCQPFSLAG 20
>gi|317179556|dbj|BAJ57344.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori F30]
Length = 78
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 18/55 (32%), Gaps = 4/55 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI 56
L LF G G R L EC ++EI + + N L I
Sbjct: 7 LTYISLFSGAGVGRYGL----LEEGFECVATNEILEKRLNIQRINRKCKLDENCI 57
>gi|229008076|ref|ZP_04165619.1| Phage-related DNA methylase [Bacillus mycoides Rock1-4]
gi|228753191|gb|EEM02686.1| Phage-related DNA methylase [Bacillus mycoides Rock1-4]
Length = 87
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 6/70 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--KTYQANFPNTLIFGDIAKI 59
L D+F G+GG RL +EQ + C E + ++ DI +
Sbjct: 3 LTFLDIFAGVGGFRLGMEQAGHC----CVGFIERDKFARASYKAIHRTEKEWTKRDINGV 58
Query: 60 KTQDIPDHDV 69
+
Sbjct: 59 PPAFWKKTTL 68
>gi|229552043|ref|ZP_04440768.1| DNA-cytosine methyltransferase [Lactobacillus rhamnosus LMS2-1]
gi|258539457|ref|YP_003173956.1| cytosine-specific methyltransferase [Lactobacillus rhamnosus Lc
705]
gi|229314620|gb|EEN80593.1| DNA-cytosine methyltransferase [Lactobacillus rhamnosus LMS2-1]
gi|257151133|emb|CAR90105.1| Cytosine-specific methyltransferase [Lactobacillus rhamnosus Lc
705]
Length = 415
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 29/126 (23%), Gaps = 49/126 (38%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL----------- 51
I DLF G GG+ E++ + +T +
Sbjct: 4 NIIDLFSGAGGLTEGF----RRPEYNILAHVEMSVDACQTLRLRDDYYQLKKRNMLQQYR 59
Query: 52 ------------------IFGDIAKIKTQDIPDHD----------------VLLAGFPCQ 77
+ +T D D ++ G PCQ
Sbjct: 60 NFLDGKISLSELEQQCGLRQKALTINETIDTGTIDGILAKIDSKLSNRQVHGIIGGPPCQ 119
Query: 78 PFSQAG 83
+S G
Sbjct: 120 AYSTVG 125
>gi|213622824|ref|ZP_03375607.1| DNA cytosine methylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 324
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 19/25 (76%), Positives = 19/25 (76%)
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
Q IP HDVLLAGFPCQPFS AG
Sbjct: 12 HIRQHIPQHDVLLAGFPCQPFSLAG 36
>gi|145631945|ref|ZP_01787699.1| putative 5-methylcytosine methyltransferase [Haemophilus
influenzae R3021]
gi|145639068|ref|ZP_01794676.1| ABC transporter ATPase component [Haemophilus influenzae PittII]
gi|144982396|gb|EDJ89970.1| putative 5-methylcytosine methyltransferase [Haemophilus
influenzae R3021]
gi|145272040|gb|EDK11949.1| ABC transporter ATPase component [Haemophilus influenzae PittII]
Length = 79
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50
L DLF G GG+ L + S E+ P +TY+ NFP+
Sbjct: 3 LTYLDLFSGAGGLSLGFDYA----EFRQLLSIELEPVYCETYRVNFPHH 47
>gi|186476672|ref|YP_001858142.1| C-5 cytosine-specific DNA methylase [Burkholderia phymatum
STM815]
gi|184193131|gb|ACC71096.1| C-5 cytosine-specific DNA methylase [Burkholderia phymatum
STM815]
Length = 535
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----IAKI 59
I D F G GG LE+ F + +P ++ + AN P+T + + + I
Sbjct: 17 IIDNFAGGGGASTGLERAFGRP---VDVAINHDPEAIAMHTANHPHTAHYCESVFGVDPI 73
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
++ C+ FS+A
Sbjct: 74 AVTRNQPAALVWLSPDCKHFSKA 96
>gi|297668050|ref|XP_002812266.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
3A-like [Pongo abelii]
Length = 696
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L+ V+ + +SE+ S+ +++ +
Sbjct: 418 IRVLSLFDGIATGLLVLKDLGIQ--VDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT 475
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 476 QKHIQEWGPFDLVIGGSPCNDLSI 499
>gi|320010241|gb|ADW05091.1| hypothetical protein Sfla_3673 [Streptomyces flavogriseus ATCC
33331]
Length = 216
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 11/78 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ D CG GG+ + + +INP ++ + + +
Sbjct: 14 LRLLDACCGAGGLSMGYYLA----GYDIVG-VDINPMPNYPFEFVQADAVDY------VA 62
Query: 62 QDIPDHDVLLAGFPCQPF 79
D++ +PCQ F
Sbjct: 63 DHGSGFDLIHGSWPCQYF 80
>gi|189192548|ref|XP_001932613.1| DNA methyltransferase Dim-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187974219|gb|EDU41718.1| DNA methyltransferase Dim-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1102
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 35/95 (36%), Gaps = 18/95 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ---------ANFPNTLI 52
L+ +F G G + LE+ V+ + + + + T + + ++
Sbjct: 655 LRGLSIFSGGGSLDRGLEEGGA---VKIHTAVDFSAEACHTQRANAQDPENLHIYCGSVD 711
Query: 53 FGDIAKIKTQDIPDH------DVLLAGFPCQPFSQ 81
++ +D D+++AG PC FS
Sbjct: 712 DYLDTVLRGKDQKFIPRVGEVDLIVAGSPCPGFST 746
>gi|323448401|gb|EGB04300.1| hypothetical protein AURANDRAFT_67346 [Aureococcus anophagefferens]
Length = 1640
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 27/90 (30%), Gaps = 14/90 (15%)
Query: 7 LFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFP------------NTLI 52
+ GIGG L++ + + + + S + +Q FP
Sbjct: 127 FYSGIGGFDKGLQRAWEKHGAAFKVVLAIDNCELSNEIHQNTFPGVTVVNHILGKSFKTT 186
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
I++ ++ A C S A
Sbjct: 187 MDLISEYVPREQWSSMYWHASPSCIEGSTA 216
>gi|312214270|emb|CBX94263.1| hypothetical protein [Leptosphaeria maculans]
Length = 1340
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 17/94 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LK +F G G + +E+ VE + + +P+++ T +AN N I +
Sbjct: 643 LKGLSIFSGGGSLDRGIEEGG---GVEFHTAVDFSPHAIHTQRANARNPKICLYCGSVDD 699
Query: 62 Q--------------DIPDHDVLLAGFPCQPFSQ 81
I + L AG PC FS
Sbjct: 700 YLKAALKGTNRDLIAGIGKVEFLCAGSPCPGFST 733
>gi|300702384|ref|YP_003743984.1| cytosine-specific methyltransferase [Ralstonia solanacearum
CFBP2957]
gi|299070045|emb|CBJ41330.1| putative cytosine-specific methyltransferase [Ralstonia
solanacearum CFBP2957]
Length = 438
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 30/101 (29%), Gaps = 23/101 (22%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ D+F L + F+ E +P + +T + N +
Sbjct: 7 LRFADVFA----GCGGLSLGLLEAGCQGVFAIERSPLAFETLRHNLIDGKQHKFDWPNWL 62
Query: 62 QD-------------------IPDHDVLLAGFPCQPFSQAG 83
D+++ G PCQ FS AG
Sbjct: 63 PKEAMTCEDLLFRHGAQLDGIKGAIDLIVGGPPCQGFSTAG 103
>gi|229133284|ref|ZP_04262113.1| Phage-related DNA methylase [Bacillus cereus BDRD-ST196]
gi|228650100|gb|EEL06106.1| Phage-related DNA methylase [Bacillus cereus BDRD-ST196]
Length = 73
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI 56
L D F G+G R+ +EQ +C E + + KTY+A N + ++
Sbjct: 3 LTFIDWFAGVGMARIGMEQA----GHKCVGYCEWDKAARKTYEAMHNNNGEWTEV 53
>gi|219119343|ref|XP_002180434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407907|gb|EEC47842.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 699
Score = 42.6 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 21/98 (21%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-----FGDI 56
L + D+F GIG + L++ + E + S YQ N + GDI
Sbjct: 242 LTVLDMFAGIGTATVCLKRLGLQ--ISKIVRVEHDHISTHVYQENHDCSYNPTLADHGDI 299
Query: 57 AKIKTQD--------------IPDHDVLLAGFPCQPFS 80
+ Q D+++ G PC +S
Sbjct: 300 KHVYCQKFEDFRDNLEHMAETHGPFDLVIGGPPCVDYS 337
>gi|322492416|emb|CBZ27690.1| modification methylase-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 847
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI +I + P HDVL GFPCQ F++AG
Sbjct: 439 DITEIPSAFFPMHDVLTGGFPCQSFAKAG 467
>gi|300717794|ref|YP_003742597.1| C-5 cytosine-specific DNA methylase [Erwinia billingiae Eb661]
gi|299063630|emb|CAX60750.1| C-5 cytosine-specific DNA methylase [Erwinia billingiae Eb661]
Length = 236
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 6/63 (9%)
Query: 27 VECFFSSEINPYS------VKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
+ E + Y+ + + P + + D++ GFPCQ S
Sbjct: 22 WRTVCAVERDAYAAQVLAQRQNDRCLRPFPIWSDICSFDGKPWRGIVDIVSGGFPCQDIS 81
Query: 81 QAG 83
AG
Sbjct: 82 SAG 84
>gi|224823639|ref|ZP_03696748.1| C-5 cytosine-specific DNA methylase [Lutiella nitroferrum 2002]
gi|224604094|gb|EEG10268.1| C-5 cytosine-specific DNA methylase [Lutiella nitroferrum 2002]
Length = 610
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I DLF G GG +E + + ++ ++AN P T + ++
Sbjct: 15 IVDLFAGGGGKSTGIEHA---LGRHVDIAINHDSDAISMHEANHPQTEHYCADVFEVCPR 71
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
L C FSQA
Sbjct: 72 TATRGRPVGHLHGSPDCTHFSQA 94
>gi|322505075|emb|CAM39116.2| modification methylase-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 843
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+I +I P HDVL GFPCQ F++AG
Sbjct: 441 NITEIPNAFFPTHDVLTGGFPCQSFAKAG 469
Score = 40.3 bits (93), Expect = 0.085, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54
+ ++LFCGIG R LE F+ + P + Y N
Sbjct: 327 LFTFSELFCGIGMFRSGLE----RVGGRAAFAVDFAPPAQIVYALNHRCLHDCP 376
>gi|154338798|ref|XP_001565621.1| modification methylase-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 843
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+I +I P HDVL GFPCQ F++AG
Sbjct: 441 NITEIPNAFFPTHDVLTGGFPCQSFAKAG 469
Score = 40.3 bits (93), Expect = 0.085, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54
+ ++LFCGIG R LE F+ + P + Y N
Sbjct: 327 LFTFSELFCGIGMFRSGLE----RVGGRAAFAVDFAPPAQIVYALNHRCLHDCP 376
>gi|329934923|ref|ZP_08284964.1| hypothetical protein SGM_0676 [Streptomyces griseoaurantiacus
M045]
gi|329305745|gb|EGG49601.1| hypothetical protein SGM_0676 [Streptomyces griseoaurantiacus
M045]
Length = 235
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ DLFC GG + + +I + A I T
Sbjct: 9 LRVLDLFCCAGGAAMGYHRAGFQ-----VDGCDI-ADRPRYPFAYHRGDAPAYLAHLIDT 62
Query: 62 QDIPDHDVLLAGFPCQP 78
+I + + A PCQ
Sbjct: 63 GEIERYAFVHASPPCQS 79
>gi|302673748|ref|XP_003026560.1| hypothetical protein SCHCODRAFT_62152 [Schizophyllum commune H4-8]
gi|300100243|gb|EFI91657.1| hypothetical protein SCHCODRAFT_62152 [Schizophyllum commune H4-8]
Length = 345
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 24/101 (23%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ + + GIGG+ L LE++ + + + + + + Y+ NFP T + I
Sbjct: 4 RALEFYSGIGGLHLALERSKIA--GQVACAFDWDQAAEQVYKHNFPATPVKRVRDMIPHA 61
Query: 63 D----------------------IPDHDVLLAGFPCQPFSQ 81
PD D+ L CQP++
Sbjct: 62 HRYTDLSTQVDISTLTASSLRDLFPDIDIWLLSPACQPYTV 102
>gi|290956749|ref|YP_003487931.1| modification methylase [Streptomyces scabiei 87.22]
gi|260646275|emb|CBG69370.1| putative modification methylase [Streptomyces scabiei 87.22]
Length = 400
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 34 EINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
E + ++ KT A T+ + D L+A PCQ +S AG
Sbjct: 4 EWDEWACKTRAAAGQLTIRTDVALYPVRPFLGRTDGLIASPPCQAWSMAG 53
>gi|240851538|ref|NP_001155876.1| DNA (cytosine-5)-methyltransferase 3B [Sus scrofa]
gi|226222434|gb|ACO38648.1| DNA methyltransferase 3B [Sus scrofa]
Length = 852
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ L GI L L++ + +SE+ S+ ++ N +I
Sbjct: 574 IRVLSLLDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 631
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 632 KKNIEEWGPFDLVIGGSPCNDLSN 655
>gi|219129968|ref|XP_002185148.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403327|gb|EEC43280.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 376
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTF------NHRNVECFFSSEINPYSVKTYQANFP-NTLIFG 54
L+ + F G+GG + L++ + + C + + + ++ ++ N
Sbjct: 7 LRYVEFFAGVGGWTMALQEAIQIVYPSDPPELFCSAALDHSDLCIEVFEHNHSLVIQKAV 66
Query: 55 DIAKIKTQDI--PDHDVLLAGFPCQPFSQ 81
I K+ I D+ + PCQP ++
Sbjct: 67 RIEKLTMNQIFEYRADIWMMSPPCQPHTR 95
>gi|260559315|ref|ZP_05831497.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium C68]
gi|261207983|ref|ZP_05922662.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TC 6]
gi|260074675|gb|EEW62995.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium C68]
gi|260077782|gb|EEW65494.1| C-5 cytosine-specific DNA methylase [Enterococcus faecium TC 6]
Length = 331
Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 50 TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ Q + D+L GFPCQ FS AG
Sbjct: 1 MHDITSVSDEFIQSLGPVDILCGGFPCQAFSIAG 34
>gi|261840146|gb|ACX99911.1| cytosine-specific methyltransferase [Helicobacter pylori 52]
Length = 343
Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 9/66 (13%)
Query: 27 VECFFSSEINPYSVKTYQANFPNTLI---------FGDIAKIKTQDIPDHDVLLAGFPCQ 77
EI+ + T + N P + D+ +I D D+L G PCQ
Sbjct: 22 FCHIGLVEIDRSACSTLKKNRPLWNVLEKDITTLVEQDLEQIFCIKCGDLDLLSGGCPCQ 81
Query: 78 PFSQAG 83
FS AG
Sbjct: 82 SFSYAG 87
>gi|85710862|ref|ZP_01041923.1| modification methylase (Cytosine-specific methyltransferase)
[Idiomarina baltica OS145]
gi|85695266|gb|EAQ33203.1| modification methylase (Cytosine-specific methyltransferase)
[Idiomarina baltica OS145]
Length = 515
Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 33/135 (24%), Gaps = 55/135 (40%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVK------------------- 41
+ DLF G GG+ + + S E P + K
Sbjct: 8 VIDLFAGPGGLGEGISSVADVDGSYPFRIGVSVEKEPSAHKTLTTRAFYRKIKNSELGLA 67
Query: 42 ---------------------------------TYQANFPNTLIFGDIAKIKTQDIPDHD 68
+ N I I+++
Sbjct: 68 YYNDYLMGAYTREELFAYFPIEAEESLRETLYTPHALGDDNKEIHSRISELVKAHGDKPR 127
Query: 69 VLLAGFPCQPFSQAG 83
V++ G PCQ +S AG
Sbjct: 128 VVIGGPPCQAYSLAG 142
>gi|153852755|ref|ZP_01994192.1| hypothetical protein DORLON_00174 [Dorea longicatena DSM 13814]
gi|149754397|gb|EDM64328.1| hypothetical protein DORLON_00174 [Dorea longicatena DSM 13814]
Length = 367
Score = 42.2 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 14/20 (70%), Positives = 16/20 (80%)
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
+PD D+L AGFPCQ FS AG
Sbjct: 1 MPDFDLLCAGFPCQAFSIAG 20
>gi|156060059|ref|XP_001595952.1| hypothetical protein SS1G_02167 [Sclerotinia sclerotiorum 1980]
gi|154699576|gb|EDN99314.1| hypothetical protein SS1G_02167 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 405
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 29/105 (27%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-----------PYSVKTYQANFPNT 50
L D+F G GG+ ++ + E++ P ++
Sbjct: 265 LTTLDIFSGAGGLSQGFHESGVVG---TKYVIELDTAAAKTLKRNFPDAIVYNHDANKFL 321
Query: 51 LI---------------FGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
+ A +K D ++++ G PCQ +S
Sbjct: 322 EWVVNDEADLNAGIVYDMENNALLKMPSRGDIEMIIVGPPCQGWS 366
>gi|302521590|ref|ZP_07273932.1| DNA-cytosine methyltransferase [Streptomyces sp. SPB78]
gi|302430485|gb|EFL02301.1| DNA-cytosine methyltransferase [Streptomyces sp. SPB78]
Length = 322
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57
L+ D+ G GG+ L LE+ + + + +T + N P + D
Sbjct: 4 LRSLDVCSGAGGLALGLERA----GFDPVLLLDNKGVACETVRVNRPRWNVLTTDLLDFD 59
Query: 58 KIKTQDIPDHDVLLAGFP 75
++ Q+ D D+L AG P
Sbjct: 60 PVEHQETYDVDLLSAGPP 77
>gi|224078173|ref|XP_002196308.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 3 beta [Taeniopygia
guttata]
Length = 811
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT----YQANFPNTLIFGDIA 57
+++ LF G+ L+ VE + +SEI + + N +I
Sbjct: 525 IRVLSLFDGVTTGYTVLKDLGIQ--VEKYIASEICENPIAMGKVRPEGNITYVHDVRNIT 582
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 583 KRNIEEWGPFDLVIGGSPCDDVSL 606
>gi|322499679|emb|CBZ34753.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 840
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI +I + P HDVL GFPCQ F++AG
Sbjct: 432 DITEIPSAFFPTHDVLTGGFPCQSFAKAG 460
Score = 36.8 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54
++LF GIG R LE F+ E P + Y N
Sbjct: 317 FTFSELFGGIGMFRSGLE----RVGGRAAFAVEFAPPAQIVYALNHRCLHDCP 365
>gi|146088814|ref|XP_001466154.1| modification methylase-like protein [Leishmania infantum JPCM5]
gi|134070256|emb|CAM68593.1| modification methylase-like protein [Leishmania infantum JPCM5]
Length = 840
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI +I + P HDVL GFPCQ F++AG
Sbjct: 432 DITEIPSAFFPTHDVLTGGFPCQSFAKAG 460
Score = 36.8 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54
++LF GIG R LE F+ E P + Y N
Sbjct: 317 FTFSELFGGIGMFRSGLE----RVGGRAAFAVEFAPPAQIVYALNHRCLHDCP 365
>gi|157870650|ref|XP_001683875.1| modification methylase-like protein [Leishmania major]
gi|68126942|emb|CAJ05189.1| modification methylase-like protein [Leishmania major strain
Friedlin]
Length = 840
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI +I + P HDVL GFPCQ F++AG
Sbjct: 432 DITEIPSAFFPTHDVLTGGFPCQSFAKAG 460
Score = 36.8 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG 54
++LF GIG R LE F+ E P + Y N
Sbjct: 317 FTFSELFGGIGMFRSGLE----RVGGRAAFAVEFAPPAQIVYALNHRCLHDCP 365
>gi|171679563|ref|XP_001904728.1| hypothetical protein [Podospora anserina S mat+]
gi|170939407|emb|CAP64635.1| unnamed protein product [Podospora anserina S mat+]
Length = 1287
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 18/95 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIAKIK 60
L+ DLFCG G + LE +E ++++ + ++ +
Sbjct: 807 LRGMDLFCGSGNLGRGLEDGGA---IEMRWAADTWDKAIHTYMANAPDQDIVHPFYGSVD 863
Query: 61 T--------------QDIPDHDVLLAGFPCQPFSQ 81
D +V+ AG PC FS
Sbjct: 864 DLLRLALEGKFSDNVPRPGDVEVISAGSPCPGFSL 898
>gi|299065518|emb|CBJ36687.1| Cytosine-specific methyltransferase [Ralstonia solanacearum
CMR15]
Length = 441
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 29/86 (33%), Gaps = 18/86 (20%)
Query: 13 GIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI------------- 59
G+ L L+ T E E P +T +AN + +
Sbjct: 2 GLDLGLDGTGR---FELLACVEKVPSFCETIRANRGAGRLPAGLKVFEGDISDLDPAEVL 58
Query: 60 --KTQDIPDHDVLLAGFPCQPFSQAG 83
+ DVL+ G PCQ FS AG
Sbjct: 59 AACGLKPGELDVLVGGPPCQSFSTAG 84
>gi|159461700|gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis]
Length = 925
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPN 49
+L + DL+ G G + L N +E ++ +INPY+ ++ + N P+
Sbjct: 350 VLSLLDLYSGCGAMSTGLCLGANLSGLKLETRWAVDINPYACESLKLNHPH 400
>gi|116620819|ref|YP_822975.1| DNA-cytosine methyltransferase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223981|gb|ABJ82690.1| DNA-cytosine methyltransferase [Candidatus Solibacter usitatus
Ellin6076]
Length = 419
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 24/102 (23%), Gaps = 27/102 (26%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI-------- 56
F G G + L + + +S E+ + I
Sbjct: 33 ISFFTGGGFLDLGMTRA----GFPIAWSLELQEAFCDAHDHGMDALFASQGIAGTAPTIS 88
Query: 57 ---------------AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ T D ++ G PC FS G
Sbjct: 89 CRESIRSKGPVAIRREALGTLARGDDFGMIGGPPCPDFSVGG 130
>gi|229824476|ref|ZP_04450545.1| hypothetical protein GCWU000282_01799 [Catonella morbi ATCC 51271]
gi|229786077|gb|EEP22191.1| hypothetical protein GCWU000282_01799 [Catonella morbi ATCC 51271]
Length = 414
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 43/135 (31%), Gaps = 52/135 (38%)
Query: 1 MLKITDLFCGIGGIRLDLEQ--------TFNHRNVECFFSSEI------NPYSVKTYQ-- 44
ML++ + F GIG L+ + +V ++ +I + + + Y
Sbjct: 1 MLRMIETFSGIGSQTQALKNIGLDHKVVAISEWDVNAMYAYDILHNGKQDLSAFRHYTKQ 60
Query: 45 ------------------------------------ANFPNTLIFGDIAKIKTQDIPDHD 68
+ N DI KI QD+P+ D
Sbjct: 61 DLIDELKEYTLSMDGKNPMSERAISSLSILHLKAILCSIRNNNNLVDITKIHAQDLPEAD 120
Query: 69 VLLAGFPCQPFSQAG 83
+L FPCQ S +G
Sbjct: 121 ILTYSFPCQDLSISG 135
>gi|325266450|ref|ZP_08133127.1| modification methylase XorII [Kingella denitrificans ATCC 33394]
gi|324981893|gb|EGC17528.1| modification methylase XorII [Kingella denitrificans ATCC 33394]
Length = 371
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 11/73 (15%)
Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDH-------DVL 70
E + +I+P Y+ NFP+T + + ++ H D +
Sbjct: 21 AELA----GFHTIAAIDIDPTLQSAYKNNFPHTKVLNKDLSLLDENGWRHILGRQKIDGV 76
Query: 71 LAGFPCQPFSQAG 83
+ G PCQ +S+ G
Sbjct: 77 IGGPPCQGYSRMG 89
>gi|269958230|ref|YP_003328018.1| C-5 cytosine-specific DNA methylase [Xylanimonas cellulosilytica
DSM 15894]
gi|269306911|gb|ACZ32460.1| C-5 cytosine-specific DNA methylase [Xylanimonas cellulosilytica
DSM 15894]
Length = 687
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI-------A 57
DLF G GG+ +++ + ++ N Y V ++AN P T + A
Sbjct: 24 VDLFSGFGGLTQGIDEA----GFDVITAANHNEYKVAVHEANHPETEHWIADLVDTESPA 79
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82
+++P D+L AG C S A
Sbjct: 80 YHSVRELPAGDLLAAGVSCVNHSPA 104
>gi|332029105|gb|EGI69118.1| tRNA (cytosine-5-)-methyltransferase [Acromyrmex echinatior]
Length = 309
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 28 ECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIP--DHDVLLAGFPCQPFSQAG 83
+ + +INP + Y NFP T+ + +I I Q++ + D++ PCQPF++ G
Sbjct: 9 KVVAAIDINPVANDVYHHNFPETVLMNRNIQSINAQELNKLNVDIMFMSPPCQPFTRLG 67
>gi|225435648|ref|XP_002283355.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 965
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
+ + DL+ G G + L V ++ +IN Y+
Sbjct: 387 MTLLDLYSGCGAMSSGLCLGAKMSGVNLVTRWAIDINAYAC 427
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 12/46 (26%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
P+ + D DV+ G PCQ S
Sbjct: 541 WEPFEGLGNCCESIKDFVTEGYKSKILPLPGDVDVICGGPPCQGIS 586
>gi|213156207|ref|YP_002318627.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii
AB0057]
gi|301346662|ref|ZP_07227403.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii
AB056]
gi|301596880|ref|ZP_07241888.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii
AB059]
gi|332852721|ref|ZP_08434355.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii
6013150]
gi|332871075|ref|ZP_08439688.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii
6013113]
gi|213055367|gb|ACJ40269.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii
AB0057]
gi|332729074|gb|EGJ60422.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii
6013150]
gi|332731835|gb|EGJ63115.1| C-5 cytosine-specific DNA methylase [Acinetobacter baumannii
6013113]
Length = 492
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG LE+ F + +P ++ ++AN D+ +
Sbjct: 15 IVDNFAGGGGTSTGLEKAFGRP---VDIAINHDPKAIAMHRANHPNTRHFCEDVWDVDPV 71
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
K + ++ C+ FS+A
Sbjct: 72 KVTNNQPVGLVWLSPDCKHFSKA 94
>gi|145610805|ref|XP_368355.2| hypothetical protein MGG_00889 [Magnaporthe oryzae 70-15]
gi|145018162|gb|EDK02441.1| hypothetical protein MGG_00889 [Magnaporthe oryzae 70-15]
Length = 1269
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 34/113 (30%), Gaps = 36/113 (31%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
L+ DLF G G + +E+ VE + ++I ++ TY AN +
Sbjct: 711 LRGLDLFAGCGNLGRGIEEGGA---VEVKWVNDIWTNAIHTYMANTNDKSAVKPFLGSVD 767
Query: 56 ---------------------------IAKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ + + + G PCQ FS
Sbjct: 768 LLLEKALKRDGSVLDGSVLDGSVLDGSVLDGSVPSRGEVEFISGGSPCQGFSL 820
>gi|254526757|ref|ZP_05138809.1| modification methylase EcoRII [Prochlorococcus marinus str. MIT
9202]
gi|221538181|gb|EEE40634.1| modification methylase EcoRII [Prochlorococcus marinus str. MIT
9202]
Length = 298
Score = 42.2 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 17/19 (89%), Positives = 17/19 (89%)
Query: 65 PDHDVLLAGFPCQPFSQAG 83
P HDVLLAGFPCQPFS AG
Sbjct: 7 PSHDVLLAGFPCQPFSLAG 25
>gi|302785127|ref|XP_002974335.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii]
gi|300157933|gb|EFJ24557.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii]
Length = 773
Score = 42.2 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFP 48
DL+CG G + L V+ ++ + N ++ + + N P
Sbjct: 218 LDLYCGCGAMSTGLSMGAALGGVKLVTKWAVDYNEHACNSMKYNHP 263
>gi|29376841|ref|NP_815995.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis V583]
gi|29344306|gb|AAO82065.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis V583]
Length = 331
Score = 42.2 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 50 TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
++ Q + D+L GFPCQ FS AG
Sbjct: 1 MYDITSVSDEFIQSLGPVDILCGGFPCQAFSIAG 34
>gi|260890221|ref|ZP_05901484.1| modification methylase MthTI [Leptotrichia hofstadii F0254]
gi|260859841|gb|EEX74341.1| modification methylase MthTI [Leptotrichia hofstadii F0254]
Length = 41
Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
+K+ F G+GGI L EQ +S+EI+
Sbjct: 1 MKVAGFFSGVGGIELGFEQ----VGFNVIYSNEIDKKCR 35
>gi|284054198|ref|ZP_06384408.1| DNA-cytosine methyltransferase [Arthrospira platensis str.
Paraca]
Length = 90
Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 24/70 (34%), Gaps = 6/70 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ DLF G GG L + + E+ + TY N + + I
Sbjct: 27 VLDLFAGCGGFSLGFKAA----GFQTIGY-EMLADAAATYTRNLQDPCYCQTLE-IGQDL 80
Query: 64 IPDHDVLLAG 73
DV++ G
Sbjct: 81 CNHPDVIIGG 90
>gi|260551407|ref|ZP_05825607.1| site-specific DNA methylase [Acinetobacter sp. RUH2624]
gi|260405570|gb|EEW99062.1| site-specific DNA methylase [Acinetobacter sp. RUH2624]
Length = 490
Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG LE+ F + +P ++ ++AN D+ +
Sbjct: 13 IVDNFAGGGGTSTGLEKAFGRP---VDIAINHDPKAIAMHRANHPNTRHFCEDVWDVDPV 69
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
K + ++ C+ FS+A
Sbjct: 70 KVTNNQPVGLVWLSPDCKHFSKA 92
>gi|184158530|ref|YP_001846869.1| site-specific DNA methylase [Acinetobacter baumannii ACICU]
gi|183210124|gb|ACC57522.1| Site-specific DNA methylase [Acinetobacter baumannii ACICU]
Length = 492
Score = 42.2 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG LE+ F + +P ++ ++AN D+ +
Sbjct: 15 IVDNFAGGGGTSTGLEKAFGRP---VDIAINHDPKAIAMHRANHPNTRHFCEDVWDVDPV 71
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
K + ++ C+ FS+A
Sbjct: 72 KVTNNQPVGLVWLSPDCKHFSKA 94
>gi|323516968|gb|ADX91349.1| site-specific DNA methylase [Acinetobacter baumannii TCDC-AB0715]
gi|323518452|gb|ADX92833.1| site-specific DNA methylase [Acinetobacter baumannii TCDC-AB0715]
Length = 492
Score = 42.2 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG LE+ F + +P ++ ++AN D+ +
Sbjct: 15 IVDNFAGGGGTSTGLEKAFGRP---VDIAINHDPKAIAMHRANHPNTRHFCEDVWDVDPV 71
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
K + ++ C+ FS+A
Sbjct: 72 KVTNNQPVGLVWLSPDCKHFSKA 94
>gi|310658846|ref|YP_003936567.1| c-5 cytosine-specific DNA methylase [Clostridium sticklandii DSM
519]
gi|308825624|emb|CBH21662.1| C-5 cytosine-specific DNA methylase [Clostridium sticklandii]
Length = 466
Score = 41.8 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG +E + +P ++ ++ N D+ +
Sbjct: 4 IIDNFAGGGGASTGIEAALGRY---IDIAINHDPDAILMHKTNHPNTKHYCESVWDVDPL 60
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ D+ C+ FS+A
Sbjct: 61 EVTQGNSVDLAWFSPDCKHFSKA 83
>gi|119512988|ref|ZP_01632048.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414]
gi|119462362|gb|EAW43339.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414]
Length = 424
Score = 41.8 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 17/89 (19%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPY----------SVKTYQANFPNTLIFGDI 56
LF G GG+ + Q + + E +P + + + +I +
Sbjct: 99 LFSGGGGVEAGMLQA----GIRPAIAVEYDPTKPKLSRAISQTHHCNFSEYRCKVIQQTV 154
Query: 57 AKIKT---QDIPDHDVLLAGFPCQPFSQA 82
++ Q P D L A C FSQA
Sbjct: 155 QEVAASGFQGFPQPDYLHASPVCANFSQA 183
>gi|33600653|ref|NP_888213.1| modification methylase [Bordetella bronchiseptica RB50]
gi|33568253|emb|CAE32165.1| modification methylase [Bordetella bronchiseptica RB50]
Length = 644
Score = 41.8 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIAKI 59
+ D+F G GG EQ + NP ++ ++ N P + ++
Sbjct: 15 VVDIFAGGGGWSTAYEQA---TGQHVHIAINHNPDALSMHEVNHPQAQHYIADVWEVCPR 71
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ L C SQA
Sbjct: 72 EATGGMPVGWLHLSPDCTDHSQA 94
>gi|190338655|gb|AAI62582.1| Dnmt6 protein [Danio rerio]
Length = 728
Score = 41.8 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L + VE + +SE+ S+ +++ +
Sbjct: 451 IRVLSLFDGIATGLLVLRELGIQ--VERYVASEVCEDSITVGIVRHQGRIMYVGDVRQLT 508
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 509 RKNIQEWGPFDLVIGGSPCNDLSI 532
>gi|66392184|ref|NP_001018150.1| DNA (cytosine-5)-methyltransferase 3A [Danio rerio]
gi|62433265|dbj|BAD95480.1| DNA methyltransferase [Danio rerio]
Length = 731
Score = 41.8 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI L L + VE + +SE+ S+ +++ +
Sbjct: 451 IRVLSLFDGIATGLLVLRELGIQ--VERYVASEVCEDSITVGIVRHQGRIMYVGDVRQLT 508
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ Q+ D+++ G PC S
Sbjct: 509 RKNIQEWGPFDLVIGGSPCNDLSI 532
>gi|302818367|ref|XP_002990857.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii]
gi|300141418|gb|EFJ08130.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii]
Length = 933
Score = 41.8 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFP 48
DL+CG G + L V ++ + N ++ + + N P
Sbjct: 371 LDLYCGCGAMSTGLSMGAALGGVNLVTKWAVDYNEHACNSMKYNHP 416
>gi|299769738|ref|YP_003731764.1| C-5 cytosine-specific DNA methylase [Acinetobacter sp. DR1]
gi|298699826|gb|ADI90391.1| C-5 cytosine-specific DNA methylase [Acinetobacter sp. DR1]
Length = 492
Score = 41.8 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKI 59
I D F G GG LE+ F + +P + + D+ +
Sbjct: 15 IVDNFAGGGGTSTGLEKAFGRP---VDIAINHDPKALAMHRANHPNTRHFCENVWDVDPV 71
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
K + ++ C+ FS+A
Sbjct: 72 KVTNNQPVGLVWLSPDCKHFSKA 94
>gi|312132821|ref|YP_004000160.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
longum BBMN68]
gi|311773786|gb|ADQ03274.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
longum BBMN68]
Length = 517
Score = 41.8 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%), Gaps = 4/32 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSE 34
+LF G GG+ L L ++E
Sbjct: 8 TFIELFAGCGGLSLGLRSA----GFREVMANE 35
Score = 39.5 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
+ D++ G PCQ FS AG
Sbjct: 128 HGEVDLVSGGPPCQSFSLAG 147
>gi|71065540|ref|YP_264267.1| C-5 cytosine-specific DNA methylase [Psychrobacter arcticus
273-4]
gi|71038525|gb|AAZ18833.1| probable C-5 cytosine-specific DNA methylase [Psychrobacter
arcticus 273-4]
Length = 488
Score = 41.8 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG LE F + +P ++ ++ N DI
Sbjct: 10 IIDNFAGGGGTSTGLEAAFGRP---VDIAINHDPEAIAMHRINHPGTKHYCESVWDIEPK 66
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
++ C+ FS+A
Sbjct: 67 SVTGNQPVGLVWLSPDCKHFSKA 89
>gi|308805851|ref|XP_003080237.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri]
gi|116058697|emb|CAL54404.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri]
Length = 382
Score = 41.8 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
+L+ GIG RL LE + ++ + + + + Y+ANF + +I + +
Sbjct: 39 ELYSGIGATRLALEHLVDLQD---VVAIDNSDAANAVYEANFGDVPRRANIEHLDANALF 95
Query: 66 DHD----VLLAGFPCQPFSQAG 83
L A PCQP+++ G
Sbjct: 96 PSSERDYALTASPPCQPYTRRG 117
>gi|296087643|emb|CBI34899.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 41.8 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 8/79 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + L + + + EI+ + ++ + T G + I
Sbjct: 414 ITLLSLFSGIGGAEIALHRLGIPL--KNVVAVEISETNRNILRSWWEQTNQRGTLVDIAD 471
Query: 62 QDIPDHDVL------LAGF 74
+ D L GF
Sbjct: 472 VQQLNGDRLEQLIHTFGGF 490
>gi|325129892|gb|EGC52695.1| DNA-cytosine methyltransferase [Neisseria meningitidis
OX99.30304]
Length = 335
Score = 41.8 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Query: 23 NHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDI------AKIKTQDIPDHDVLLAGFP 75
++ ++ ++E+ P + + +I GDI + D L+A P
Sbjct: 2 HNAGIKIIAANELVPERANLYKALYPESKMIIGDILHEEVFQNLIQSVPNRLDFLIASPP 61
Query: 76 CQPFSQAG 83
CQ S AG
Sbjct: 62 CQGMSVAG 69
>gi|297746421|emb|CBI16477.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 41.8 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
+ + DL+ G G + L V ++ +IN Y+
Sbjct: 204 MTLLDLYSGCGAMSSGLCLGAKMSGVNLVTRWAIDINAYAC 244
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 12/46 (26%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
P+ + D DV+ G PCQ S
Sbjct: 397 WEPFEGLGNCCESIKDFVTEGYKSKILPLPGDVDVICGGPPCQGIS 442
>gi|255071197|ref|XP_002507680.1| predicted protein [Micromonas sp. RCC299]
gi|226522955|gb|ACO68938.1| predicted protein [Micromonas sp. RCC299]
Length = 1263
Score = 41.8 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+KI LF GIGG+ L Q + E + + +FP + DI+ +
Sbjct: 1 MKIVTLFTGIGGLDLGFSQA----GHDVIMQVESDERCASVLKTHFPGARLHRDISSL 54
>gi|302381289|ref|YP_003817112.1| DNA-cytosine methyltransferase [Brevundimonas subvibrioides ATCC
15264]
gi|302191917|gb|ADK99488.1| DNA-cytosine methyltransferase [Brevundimonas subvibrioides ATCC
15264]
Length = 384
Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFSQAG 83
F+++++ +++AN + GD+ + D+P D+ A PCQ S AG
Sbjct: 29 RTLFANDMDRAKAASWRANHAGDIHVGDVWTLDAGDLPGRADLAWASSPCQDVSLAG 85
>gi|258515662|ref|YP_003191884.1| hypothetical protein Dtox_2452 [Desulfotomaculum acetoxidans DSM
771]
gi|257779367|gb|ACV63261.1| hypothetical protein Dtox_2452 [Desulfotomaculum acetoxidans DSM
771]
Length = 177
Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 27/108 (25%), Gaps = 29/108 (26%)
Query: 2 LKITDLFCGIGGIRLDL-----EQTFNHRNVECFFSSEIN-------------PYSVKTY 43
+ F GIGG L + E E + + P +
Sbjct: 20 YTVVHFFAGIGGGALGMQKSMVEYRGLLGKFETIVGIDCDREACQDFEMITGVPAACIDL 79
Query: 44 QANFPNTLIFGDIAKIKTQDIPDHDV-----------LLAGFPCQPFS 80
+ G + Q+ D+ + PC+ FS
Sbjct: 80 FSRKDYIAYHGHEPPLGWQEATAEDIRNATRGIYPSVIFMSPPCKGFS 127
>gi|242077178|ref|XP_002448525.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor]
gi|241939708|gb|EES12853.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor]
Length = 913
Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 3 KITDLFCGIGGIRLDLE--QTFNHRNVECFFSSEINPYSVKTYQANFPN 49
+ DL+ G GG+ L + +E ++ ++N ++ ++ + N P
Sbjct: 343 TLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQ 391
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 13/46 (28%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
P + + + D DV+ G PCQ S
Sbjct: 478 WEPIDNLSDCPLKIREFVQEGHRRRILPLPGDVDVICGGPPCQGIS 523
>gi|242065598|ref|XP_002454088.1| hypothetical protein SORBIDRAFT_04g024430 [Sorghum bicolor]
gi|241933919|gb|EES07064.1| hypothetical protein SORBIDRAFT_04g024430 [Sorghum bicolor]
Length = 770
Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 3 KITDLFCGIGGIRLDLE--QTFNHRNVECFFSSEINPYSVKTYQANFPN 49
+ DL+ G GG+ L + +E ++ ++N ++ ++ + N P
Sbjct: 349 TLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQ 397
Score = 33.8 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 13/46 (28%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
P + + + D DV+ G PCQ S
Sbjct: 483 WEPIDNLSDCPLKIREFVQEGHRRKILPLPGDVDVICGGPPCQGIS 528
>gi|75157426|sp|Q8LPU5|CMT3_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 3; AltName:
Full=Chromomethylase 3; AltName: Full=DNA
methyltransferase 105
gi|20977600|gb|AAM28227.1| DNA methyltransferase 105 [Zea mays]
Length = 915
Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 3 KITDLFCGIGGIRLDLE--QTFNHRNVECFFSSEINPYSVKTYQANFPN 49
+ DL+ G GG+ L + +E ++ ++N ++ ++ + N P
Sbjct: 346 TLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQ 394
>gi|162460714|ref|NP_001105167.1| DNA (cytosine-5)-methyltransferase 3 [Zea mays]
gi|75167623|sp|Q9ARI6|CMT2_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 2; AltName:
Full=Chromomethylase 2; AltName: Full=DNA cytosine
methyltransferase MET5; AltName: Full=Zea
methyltransferase5; Short=Zmet5
gi|13272199|gb|AAK15805.1| chromomethylase [Zea mays]
Length = 915
Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 3 KITDLFCGIGGIRLDLE--QTFNHRNVECFFSSEINPYSVKTYQANFPN 49
+ DL+ G GG+ L + +E ++ ++N ++ ++ + N P
Sbjct: 346 TLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQ 394
>gi|328869161|gb|EGG17539.1| DNA (cytosine-5-)-methyltransferase [Dictyostelium fasciculatum]
Length = 373
Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 32/104 (30%), Gaps = 24/104 (23%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
+ I + F GIGG+ + + S +IN + Y + + +
Sbjct: 1 MNIIEYFSGIGGMYYSAKLSGVP--FTVKQSFDINTTANTCYNYSIHSLSNTDNNNNTTN 58
Query: 59 -------------------IKTQDIPDHDVLLAGFPCQPFSQAG 83
+K + + L PCQPF + G
Sbjct: 59 SKSKKKNVVVNNKSIDALTVKDLESYKANTWLMSPPCQPFCRVG 102
>gi|196048067|ref|ZP_03115245.1| DNA-cytosine methyltransferase [Bacillus cereus 03BB108]
gi|196021323|gb|EDX60052.1| DNA-cytosine methyltransferase [Bacillus cereus 03BB108]
Length = 427
Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDI-----PDHDVLL 71
L+ F+ + + EIN + KTY+ N P+T+ DI + +I + +LL
Sbjct: 18 LDTGFSLQGFNLKLAIEINSDACKTYKVNHPDTIVWNRDIKTVTGDEILSITKNNPIILL 77
Query: 72 AGFPCQPFSQ 81
G PCQ FS
Sbjct: 78 GGSPCQSFSI 87
>gi|299145766|ref|ZP_07038834.1| putative C-5 cytosine-specific DNA methylase [Bacteroides sp.
3_1_23]
gi|298516257|gb|EFI40138.1| putative C-5 cytosine-specific DNA methylase [Bacteroides sp.
3_1_23]
Length = 545
Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
DLFCG GG +E+ N + + + ++ ++ AN P+ L F
Sbjct: 5 YIDLFCGAGGTSTGVEKARLENEQCAKVIACVNHDKNAIASHAANHPDALHFTEDIRTLN 64
Query: 55 ------DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ K + + VL A C FS+A
Sbjct: 65 LSPLVSHLQKCRAEYPEALIVLWASLECTNFSKA 98
>gi|242087283|ref|XP_002439474.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor]
gi|241944759|gb|EES17904.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor]
Length = 1441
Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFP 48
L + DL+CG GG+ L V ++ + + + +T++ N P
Sbjct: 856 LSLLDLYCGCGGMSTGLCLGARGGGVNLVARWAVDGDEVACETFRLNHP 904
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 58 KIKTQDIPDHDVLLAGFPCQPFS 80
+ + D DV+ G PCQ S
Sbjct: 1042 CLGWLWLGDVDVICGGPPCQGIS 1064
>gi|307106231|gb|EFN54477.1| hypothetical protein CHLNCDRAFT_135136 [Chlorella variabilis]
Length = 824
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 27/89 (30%), Gaps = 14/89 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ----------ANFPNTL 51
L++ +LF G+G + + E++ + +Y + L
Sbjct: 280 LRMVELFAGLGTVSDAAACA----GFQPVCGLEVDAAASSSYCANVPVAGGEEMSVEQFL 335
Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
+ + L A PCQ S
Sbjct: 336 HALARGEEGMPEPGSIAYLHASPPCQALS 364
>gi|254452152|ref|ZP_05065589.1| DNA-cytosine methyltransferase [Octadecabacter antarcticus 238]
gi|198266558|gb|EDY90828.1| DNA-cytosine methyltransferase [Octadecabacter antarcticus 238]
Length = 488
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 31/131 (23%), Gaps = 51/131 (38%)
Query: 4 ITDLFCGIGGIRLDLEQTFNH---RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
I D+F G GG+ E ++E++ ++ KT A
Sbjct: 7 IVDIFAGPGGLGEGFSALGRDTVRPFFETAIAAEMDKHAHKTLTLRAFYRQFPHQKAPQS 66
Query: 61 TQDI------------------------------------------------PDHDVLLA 72
D D VLL
Sbjct: 67 YYDYIAGKRETPYTDDTLAQWNNASQKVLHVELGKSEDDALLDKKLEVSLAGRDDWVLLG 126
Query: 73 GFPCQPFSQAG 83
G PCQ +S G
Sbjct: 127 GPPCQAYSTIG 137
>gi|302188331|ref|ZP_07265004.1| putative cytosine-specific modification methylase [Pseudomonas
syringae pv. syringae 642]
Length = 599
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 28/83 (33%), Gaps = 8/83 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKI 59
+ DLF G GG + + + +V + NP + + ++ +
Sbjct: 24 VVDLFAGGGGASTGISRAYREPDV----AVNHNPIALAVHRANHPQTDHYVADVFEVDPV 79
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+L A C+ S+A
Sbjct: 80 LATRGQPVGILWASPDCRHHSKA 102
>gi|159897859|ref|YP_001544106.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus ATCC
23779]
gi|159890898|gb|ABX03978.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus ATCC
23779]
Length = 415
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 22/79 (27%), Gaps = 22/79 (27%)
Query: 24 HRNVECFFSSEINPYSVKTYQANFPNTLIF----------------------GDIAKIKT 61
N + + N + +Y N + ++
Sbjct: 28 GVNFRPLCAVDFNVDACTSYNMNMQWLHQNAPHLQTTQASKAYLRKVESLNVNAVKRLFQ 87
Query: 62 QDIPDHDVLLAGFPCQPFS 80
D D+L+ G PCQ +S
Sbjct: 88 LQQGDLDILMGGPPCQGYS 106
>gi|2865425|gb|AAC02665.1| chromomethylase [Arabidopsis thaliana]
gi|2865430|gb|AAC02668.1| chromomethylase [Arabidopsis thaliana]
Length = 560
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
DL+ G G + + V+ +S +IN ++
Sbjct: 228 LDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFAC 265
>gi|2865420|gb|AAC02662.1| chromomethylase [Arabidopsis thaliana]
Length = 754
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
DL+ G G + + V+ +S +IN ++
Sbjct: 228 LDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFAC 265
>gi|2766713|gb|AAB95485.1| chromomethylase [Arabidopsis thaliana]
gi|2865414|gb|AAC02659.1| chromomethylase [Arabidopsis thaliana]
Length = 791
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
DL+ G G + + V+ +S +IN ++
Sbjct: 228 LDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFAC 265
>gi|2865422|gb|AAC02663.1| chromomethylase [Arabidopsis thaliana]
Length = 791
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
DL+ G G + + V+ +S +IN ++
Sbjct: 228 LDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFAC 265
>gi|2865433|gb|AAC02670.1| chromomethylase [Arabidopsis suecica]
Length = 754
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
DL+ G G + + V+ +S +IN ++
Sbjct: 228 LDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFAC 265
>gi|2865428|gb|AAC02667.1| chromomethylase [Arabidopsis thaliana]
Length = 560
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
DL+ G G + + V+ +S +IN ++
Sbjct: 228 LDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFAC 265
>gi|18412893|ref|NP_565245.1| CMT1 (CHROMOMETHYLASE 1); DNA binding / chromatin binding
[Arabidopsis thaliana]
gi|110832797|sp|O49139|CMT1_ARATH RecName: Full=Putative DNA (cytosine-5)-methyltransferase CMT1;
AltName: Full=Chromomethylase 1; AltName: Full=Protein
CHROMOMETHYLASE 1
gi|6503286|gb|AAF14662.1|AC011713_10 Identical to gb|AF039367 ecotype Col-0 chromomethylase (CMT1) gene
from Arabidopsis thaliana
gi|2865416|gb|AAC02660.1| chromomethylase [Arabidopsis thaliana]
gi|332198321|gb|AEE36442.1| putative DNA (cytosine-5)-methyltransferase CMT1 [Arabidopsis
thaliana]
Length = 791
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
DL+ G G + + V+ +S +IN ++
Sbjct: 228 LDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFAC 265
>gi|297788908|ref|XP_002862484.1| hypothetical protein ARALYDRAFT_920657 [Arabidopsis lyrata subsp.
lyrata]
gi|297308026|gb|EFH38742.1| hypothetical protein ARALYDRAFT_920657 [Arabidopsis lyrata subsp.
lyrata]
Length = 163
Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 30/95 (31%), Gaps = 21/95 (22%)
Query: 5 TDLFCGIGGIRLDLE----QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
D+F G GG+ LE Q F + + + +V + I+ ++
Sbjct: 6 LDIFAGCGGLSYGLEKAVAQAFKQNHPDATVFVDN--CNVILRAIMEKCGDVDDCISTVE 63
Query: 61 TQD---------------IPDHDVLLAGFPCQPFS 80
+ D + G PCQ FS
Sbjct: 64 AAELAAKLDDNQKSTLPLPGQVDFINGGPPCQGFS 98
>gi|256960248|ref|ZP_05564419.1| site-specific DNA methylase [Enterococcus faecalis Merz96]
gi|257423072|ref|ZP_05600062.1| site-specific DNA methylase [Enterococcus faecalis X98]
gi|256950744|gb|EEU67376.1| site-specific DNA methylase [Enterococcus faecalis Merz96]
gi|257164896|gb|EEU94856.1| site-specific DNA methylase [Enterococcus faecalis X98]
Length = 439
Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD-IAKIKTQ 62
+ D F G GG +E + +P ++ ++AN PNT + + + + +
Sbjct: 5 VVDNFAGGGGASTGIEHA---IGRSVDVAINHDPDAIAMHEANHPNTKHYCESVWDVHPR 61
Query: 63 DI---PDHDVLLAGFPCQPFSQA 82
D+ + C+ FS+A
Sbjct: 62 DVANGRPVALCWLSPDCKHFSKA 84
>gi|154492433|ref|ZP_02032059.1| hypothetical protein PARMER_02067 [Parabacteroides merdae ATCC
43184]
gi|154087658|gb|EDN86703.1| hypothetical protein PARMER_02067 [Parabacteroides merdae ATCC
43184]
Length = 540
Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNH--RNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
DLFCG GG + H + E + ++ ++ AN P+ L F +
Sbjct: 6 YIDLFCGAGGTSTGVNTARLHGEQCAEVIACVNHDANAIASHAANHPDALHFTEDIRTLE 65
Query: 56 ----IAKIKTQDIPDHD---VLLAGFPCQPFSQA 82
+ ++ + D VL A C FS+A
Sbjct: 66 LSPLVHHLQKCRTKNPDALVVLWASLECTNFSRA 99
>gi|261414310|gb|ACX83573.1| DNA chromomethylase [Hieracium piloselloides]
Length = 607
Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+++ DL+ G G + L N +V ++ ++N Y+ ++ + N P T + A+
Sbjct: 37 MRMLDLYSGCGAMSTGLCLGANMADVNLVTRWAVDLNKYACESLKLNHPETEARNESAED 96
Query: 60 KTQDIPDHDVLLAGFPCQPFSQAG 83
Q + + + L CQ + G
Sbjct: 97 FLQLLKEWEKL-----CQSYGLVG 115
>gi|117676134|ref|YP_863710.1| C-5 cytosine-specific DNA methylase [Shewanella sp. ANA-3]
gi|117614958|gb|ABK50411.1| C-5 cytosine-specific DNA methylase [Shewanella sp. ANA-3]
Length = 457
Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
LK+ LF G G + + + + + E+ + + N P I
Sbjct: 124 LKVASLFHGGGVLDKAVHHGLESAGISSKIAVAVELESQYLDSSLTNNPELWDSSSIVIE 183
Query: 60 KT-------QDIPDHDVLLAGFPCQPFSQAG 83
Q + DVL+AG PC S++G
Sbjct: 184 SPVQDVNLQQCNMEVDVLVAGIPCVGASKSG 214
>gi|194389448|dbj|BAG61690.1| unnamed protein product [Homo sapiens]
Length = 694
Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIAK 58
++ LF GI L L++ + +SE+ S+ ++ N +I K
Sbjct: 480 RVLSLFDGIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNITK 537
Query: 59 IKTQDIPDHDVLLAGFPCQPF 79
++ D+++ G PC
Sbjct: 538 KNIEEWGPFDLVIGGSPCNDL 558
>gi|212637209|ref|YP_002313734.1| C-5 cytosine-specific DNA methylase [Shewanella piezotolerans WP3]
gi|212558693|gb|ACJ31147.1| C-5 cytosine-specific DNA methylase [Shewanella piezotolerans WP3]
Length = 510
Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 33/134 (24%), Gaps = 54/134 (40%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSVK------------------- 41
+ DLF G GG+ + + S E P + K
Sbjct: 8 VIDLFAGPGGLGEGVSSVADGDGNKPFRIGVSVEKEPSAHKTLTTRAFYRKIKVLDGGLE 67
Query: 42 TYQANFPNTLIFGDIAKIKTQD--------------------------------IPDHDV 69
Y L +I ++ Q V
Sbjct: 68 DYFNYVRGKLTRDEIFELYPQQAQEAIYETLEEPRALGEDNDLIHSRIRELIITHQGPKV 127
Query: 70 LLAGFPCQPFSQAG 83
++ G PCQ +S AG
Sbjct: 128 VIGGPPCQAYSLAG 141
>gi|330818898|ref|YP_004351115.1| C-5 cytosine-specific DNA methylase [Burkholderia gladioli BSR3]
gi|327374440|gb|AEA65792.1| C-5 cytosine-specific DNA methylase [Burkholderia gladioli BSR3]
Length = 828
Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG LE F + +P ++ + N ++ I
Sbjct: 26 IIDNFAGGGGTSTGLEAAFGRP---VDIAINHDPQAIAMHALNHPRTKHLCENVWNVDPI 82
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ ++ C+ FS+A
Sbjct: 83 EVTQNRPVALVWLSPDCKHFSKA 105
>gi|319761948|ref|YP_004125885.1| c-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans
BC]
gi|317116509|gb|ADU98997.1| C-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans
BC]
Length = 381
Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 8/78 (10%)
Query: 14 IRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPN------TLIFGDIAKIKTQDIP 65
+ + F ++ E + + + T
Sbjct: 2 LGEGVRAAFGLLGIKHRTVCYVEREAPAAAQIARLMEAGALDSAPIWSDLLTFDGTAWRG 61
Query: 66 DHDVLLAGFPCQPFSQAG 83
D ++AGFPCQ S AG
Sbjct: 62 CVDFIIAGFPCQDISIAG 79
>gi|210610943|ref|ZP_03288668.1| hypothetical protein CLONEX_00858 [Clostridium nexile DSM 1787]
gi|210152243|gb|EEA83250.1| hypothetical protein CLONEX_00858 [Clostridium nexile DSM 1787]
Length = 170
Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT 50
+LF G GG+ L +E+ + E + + + + N P+
Sbjct: 101 YTTIELFAGAGGLALGIEKA----GFDTLGLIEFDKDASDSLKKNRPDW 145
>gi|296393765|ref|YP_003658649.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985]
gi|296180912|gb|ADG97818.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985]
Length = 393
Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 9/66 (13%)
Query: 27 VECFFSSEINPYSVKTYQANFPNTLI--------FGDIAKI-KTQDIPDHDVLLAGFPCQ 77
V F+ E + ++ T N + GD+ + + D++ G PCQ
Sbjct: 24 VRHEFAVERDRWACDTLMQNAASGYPLVRGLKVLRGDVRSVDWSLSSGQVDLVAGGPPCQ 83
Query: 78 PFSQAG 83
PFS G
Sbjct: 84 PFSLGG 89
>gi|13541905|ref|NP_111593.1| methyltransferase [Thermoplasma volcanium GSS1]
gi|14325337|dbj|BAB60241.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 334
Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
+ + D+F GIG L + + E + +INP ++K + N I + I
Sbjct: 182 MTVLDMFAGIGYFTL---PAVKYGHAEHTDACDINPEAIKFLKKNLSANGISKSVKPICG 238
Query: 61 ----TQDIPDHDVLLAG 73
I +D+++ G
Sbjct: 239 DARIACPIKAYDLIIMG 255
>gi|265763529|ref|ZP_06092097.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 2_1_16]
gi|263256137|gb|EEZ27483.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 2_1_16]
Length = 545
Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTF--NHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
DLFCG GG +E+ N + + + ++ ++ AN P+ L F
Sbjct: 5 YIDLFCGAGGTSTGVEKARLENEQCAKVIACVNHDKNAIASHAANHPDALHFTEDIRTLN 64
Query: 55 ------DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ K + + VL A C FS+A
Sbjct: 65 LSPLVSHLQKCRAEYPEALIVLWASLECTNFSKA 98
>gi|239934324|ref|ZP_04691277.1| hypothetical protein SghaA1_39380 [Streptomyces ghanaensis ATCC
14672]
gi|291442775|ref|ZP_06582165.1| gp77 [Streptomyces ghanaensis ATCC 14672]
gi|291345670|gb|EFE72626.1| gp77 [Streptomyces ghanaensis ATCC 14672]
Length = 228
Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 11/76 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ DL C GG + + +I + +P + D
Sbjct: 13 LRVLDLCCCAGGASMGYWLA----GFDVVG-VDI------VDRPRYPFPFVRADAVTYAA 61
Query: 62 QDIPDHDVLLAGFPCQ 77
+ D+L A +PCQ
Sbjct: 62 EQGHRFDLLHASWPCQ 77
>gi|325685533|gb|EGD27624.1| modification methylase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 395
Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI K+ D+PD D+L FPCQ S AG
Sbjct: 90 DITKVHATDLPDGDILTYSFPCQDLSIAG 118
>gi|269976808|ref|ZP_06183783.1| DNA methyltransferase Cfr42I [Mobiluncus mulieris 28-1]
gi|269935005|gb|EEZ91564.1| DNA methyltransferase Cfr42I [Mobiluncus mulieris 28-1]
Length = 404
Score = 41.5 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 11/68 (16%)
Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGD-----------IAKIKTQDIPDHDVLLAGFP 75
VE +E N ++ +T + N + D++ AG P
Sbjct: 24 VEHLAVAEWNRWACETIRENARLDYPLVRGVRVLEGDVRLVDWGSELSRQRIDIITAGPP 83
Query: 76 CQPFSQAG 83
CQPFS G
Sbjct: 84 CQPFSLGG 91
>gi|227874774|ref|ZP_03992927.1| DNA methyltransferase Cfr42I [Mobiluncus mulieris ATCC 35243]
gi|227844549|gb|EEJ54705.1| DNA methyltransferase Cfr42I [Mobiluncus mulieris ATCC 35243]
Length = 420
Score = 41.5 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 11/68 (16%)
Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGD-----------IAKIKTQDIPDHDVLLAGFP 75
VE +E N ++ +T + N + D++ AG P
Sbjct: 40 VEHLAVAEWNRWACETIRENARLDYPLVRGVRVLEGDVRLVDWGSELSRQRIDIITAGPP 99
Query: 76 CQPFSQAG 83
CQPFS G
Sbjct: 100 CQPFSLGG 107
>gi|159041947|ref|YP_001541199.1| DNA-cytosine methyltransferase [Caldivirga maquilingensis IC-167]
gi|157920782|gb|ABW02209.1| DNA-cytosine methyltransferase [Caldivirga maquilingensis IC-167]
Length = 309
Score = 41.5 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 11/31 (35%), Gaps = 4/31 (12%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEIN 36
DLF G GG + E +I+
Sbjct: 2 DLFSGAGGFSVGFRDA----GFEVVAGLDID 28
>gi|226293429|gb|EEH48849.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb18]
Length = 1311
Score = 41.5 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 29/96 (30%), Gaps = 20/96 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN------PYSVKTYQANFPNTLIFGD 55
L+ +LF G G LE+ + ++ E + + L +
Sbjct: 735 LRALNLFSGGGSFDRGLEEGGA---IRNEWAVEWELAPMLTYRANQHDPERVKLFLGSVN 791
Query: 56 IAKIKTQDIPDHD-----------VLLAGFPCQPFS 80
++ D + AG PCQ +S
Sbjct: 792 DFLLRAFQGKSEDNNLVAKLGDVEFISAGSPCQGYS 827
>gi|156057367|ref|XP_001594607.1| hypothetical protein SS1G_04414 [Sclerotinia sclerotiorum 1980]
gi|154702200|gb|EDO01939.1| hypothetical protein SS1G_04414 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 257
Score = 41.5 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 26/80 (32%), Gaps = 7/80 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNV-------ECFFSSEINPYSVKTYQANFPNTLIFGD 55
I DLF G GG + + ++ +E N Y N+ N F
Sbjct: 99 TIIDLFAGAGGNSIAFALSNRWAHIIAIEKDPSVIACAENNAYIYGATNINWVNGDCFEY 158
Query: 56 IAKIKTQDIPDHDVLLAGFP 75
+ + P V+ A P
Sbjct: 159 LKTHASSINPSETVIFASPP 178
>gi|1297185|gb|AAA98912.1| theoretical protein with similarity to Swiss-Prot Accession Number
P34881 DNA (cytosine-5-) methyltransferase [Arabidopsis
thaliana]
Length = 620
Score = 41.5 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
DL+ G G + + V+ +S +IN ++
Sbjct: 146 LDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFAC 183
>gi|167754389|ref|ZP_02426516.1| hypothetical protein ALIPUT_02683 [Alistipes putredinis DSM
17216]
gi|167659014|gb|EDS03144.1| hypothetical protein ALIPUT_02683 [Alistipes putredinis DSM
17216]
Length = 495
Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 15/94 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFG------- 54
DLFCG GG +E + + + ++ ++ AN P+ L F
Sbjct: 5 YIDLFCGAGGTSTGVENARHDGRQCAKVIGCVNHDANAIASHAANHPDALHFTEDIRTLE 64
Query: 55 ------DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
IA+++ Q VL A C FS+A
Sbjct: 65 LSPLTAHIAEMRRQYPDAFVVLWASLECTNFSKA 98
>gi|313884351|ref|ZP_07818113.1| putative modification methylase BanI [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620429|gb|EFR31856.1| putative modification methylase BanI [Eremococcus coleocola
ACS-139-V-Col8]
Length = 335
Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 27 VECFFSSEINPYSVKT-YQANFPNTLIFGDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83
+E E + + +T + +I DIA + + DV+ G PCQ FS AG
Sbjct: 24 IEGKLFVEFDQRACETLRENRPDWNVIEDDIANVDFSQYKNKIDVVSGGAPCQAFSYAG 82
>gi|159897886|ref|YP_001544133.1| type II restriction-modification system DNA cytosine-specific
methylase [Herpetosiphon aurantiacus ATCC 23779]
gi|159890925|gb|ABX04005.1| type II restriction-modification system DNA cytosine-specific
methylase [Herpetosiphon aurantiacus ATCC 23779]
Length = 78
Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 22/75 (29%), Gaps = 3/75 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ +TDLFC GG + + + + DI
Sbjct: 4 MTVTDLFCSAGGSSTGVVNAGATVRM---ALNHWKLVIETNNMNHPDTDHDCTDIQACDP 60
Query: 62 QDIPDHDVLLAGFPC 76
+ P +L+A C
Sbjct: 61 RRYPRTTILIASPEC 75
>gi|330927820|ref|XP_003302014.1| hypothetical protein PTT_13685 [Pyrenophora teres f. teres 0-1]
gi|311322847|gb|EFQ89880.1| hypothetical protein PTT_13685 [Pyrenophora teres f. teres 0-1]
Length = 1252
Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 20/95 (21%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L+ +F G G + LE+ V+ + + + + T + I
Sbjct: 654 LRGLSIFSGGGSLDRGLEEGGA---VKIHTAVDFSSEACHTQR-ANAKDPGGLHIYCGSV 709
Query: 62 QDI----------------PDHDVLLAGFPCQPFS 80
D + D+++AG PC FS
Sbjct: 710 DDYLDAVLTRKDQKLIARVGEVDLIVAGSPCPGFS 744
>gi|196019887|ref|XP_002119062.1| hypothetical protein TRIADDRAFT_63030 [Trichoplax adhaerens]
gi|190577119|gb|EDV18452.1| hypothetical protein TRIADDRAFT_63030 [Trichoplax adhaerens]
Length = 140
Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 31/133 (23%), Gaps = 54/133 (40%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV--------------KTYQANFP 48
KI DLF G GG+ + E S+E++ ++ +
Sbjct: 5 KIVDLFAGPGGLGEGFLSLKDA--FEICVSAEMDTHARSTLRLRSFYRMLRNERADCLSD 62
Query: 49 NTLIFGDIAKIKTQDIPDH--------------------------------------DVL 70
I + VL
Sbjct: 63 YYDYCNGITETAYSKNTYDLWEKSGEEARRIELGSIEGNKELRTRISLSGLDSDDKKWVL 122
Query: 71 LAGFPCQPFSQAG 83
+ G PCQ +S G
Sbjct: 123 IGGPPCQAYSLVG 135
>gi|291513670|emb|CBK62880.1| Site-specific DNA methylase [Alistipes shahii WAL 8301]
Length = 541
Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 15/94 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
DLFCG GG +E+ + + ++ ++ AN P + + +
Sbjct: 8 YIDLFCGAGGTSTGVEKANYKERKCAKVIACVNHDANAIASHAANHPEAQHYTEDMRTLD 67
Query: 59 ----------IKTQDIPDHDVLLAGFPCQPFSQA 82
++ VL A C FS+A
Sbjct: 68 LRPLAEHTAEMRRMYPMAKVVLWASLECTNFSRA 101
>gi|229590290|ref|YP_002872409.1| putative cytosine-specific modification methylase [Pseudomonas
fluorescens SBW25]
gi|229362156|emb|CAY49058.1| putative cytosine-specific modification methylase [Pseudomonas
fluorescens SBW25]
Length = 637
Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 28/83 (33%), Gaps = 8/83 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKI 59
+ DLF G GG + + + +V + NP + + ++ +
Sbjct: 26 VVDLFAGGGGASTGIARAYREPDV----AVNHNPIALAVHRANHPKTAHYVADVFEVDPV 81
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+L A C+ S+A
Sbjct: 82 MATGGQPVGILWASPDCRHHSKA 104
>gi|94986833|ref|YP_594766.1| modification methylase BepI (cytosine-specific methyltransferase
BepI) [Lawsonia intracellularis PHE/MN1-00]
gi|94731082|emb|CAJ54445.1| Modification methylase BepI (Cytosine-specific methyltransferase
BepI) [Lawsonia intracellularis PHE/MN1-00]
Length = 294
Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 61 TQDIPDHDVLLAGFPCQPFSQAG 83
P ++++ GFPCQ FS AG
Sbjct: 28 NFQFPKANLVIGGFPCQDFSVAG 50
>gi|322380155|ref|ZP_08054396.1| putative cytosine-specific DNA methyltransferase (DDEM)
[Helicobacter suis HS5]
gi|321147420|gb|EFX42079.1| putative cytosine-specific DNA methyltransferase (DDEM)
[Helicobacter suis HS5]
Length = 100
Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIK 60
K+ D+FCG GG+ + + ++ + + + + I DI ++
Sbjct: 4 FKLADIFCGAGGLSYGF---AQNALFDLVWALDYDLDALASYKSNHPTTNTICRDIVQLS 60
Query: 61 TQDI---PDHDVLLAGF 74
++ D+LL G
Sbjct: 61 REECLGYGPIDILLGGP 77
>gi|147779004|emb|CAN75753.1| hypothetical protein VITISV_038412 [Vitis vinifera]
Length = 1960
Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 32/93 (34%), Gaps = 15/93 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF GIGG L L Q H S EI+ + + NT G++ +I
Sbjct: 1746 LTMLSLFSGIGGAELTLHQLGIHLKG--VVSVEISETKRNILKKWWHNTGQTGELVQIDD 1803
Query: 62 Q-------------DIPDHDVLLAGFPCQPFSQ 81
D ++ PC S+
Sbjct: 1804 IQKLASSKLESLIEKFGGFDFVICQNPCTYSSR 1836
>gi|71747010|ref|XP_822560.1| hypothetical protein [Trypanosoma brucei TREU927]
gi|70832228|gb|EAN77732.1| hypothetical protein, conserved [Trypanosoma brucei]
Length = 394
Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 28/85 (32%), Gaps = 12/85 (14%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D+F GIG L L + V+ + E N YS N + I +
Sbjct: 231 VVDMFAGIGYFTLPL---AINGGVKIVHALEKNKYSALYLAFNAVQNKVSDLIVIHCGDN 287
Query: 64 -------IPDHDVLLAG--FPCQPF 79
D ++ G C+ F
Sbjct: 288 RDVGSELCGRCDRVIMGYIPSCESF 312
>gi|256839926|ref|ZP_05545435.1| LOW QUALITY PROTEIN: site-specific DNA-methyltransferase
[Parabacteroides sp. D13]
gi|256738856|gb|EEU52181.1| LOW QUALITY PROTEIN: site-specific DNA-methyltransferase
[Parabacteroides sp. D13]
Length = 296
Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats.
Identities = 13/19 (68%), Positives = 13/19 (68%)
Query: 65 PDHDVLLAGFPCQPFSQAG 83
DVL GFPCQPFS AG
Sbjct: 2 GRVDVLTGGFPCQPFSVAG 20
>gi|254522834|ref|ZP_05134889.1| C-5 cytosine-specific DNA methylase [Stenotrophomonas sp. SKA14]
gi|219720425|gb|EED38950.1| C-5 cytosine-specific DNA methylase [Stenotrophomonas sp. SKA14]
Length = 651
Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 28/90 (31%), Gaps = 10/90 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK-- 58
ML + DLFCG GG+ + + +N + V + I
Sbjct: 1 ML-VADLFCGAGGLSNGTARAMRQLGL-PVQMIGVNHWPVAIETNRRNHKEHADRIHCAD 58
Query: 59 ------IKTQDIPDHDVLLAGFPCQPFSQA 82
+ D+L A C S+A
Sbjct: 59 LESALPLTIVPEGRLDLLTAAPSCVFHSRA 88
>gi|163737542|ref|ZP_02144959.1| DNA-cytosine methyltransferase [Phaeobacter gallaeciensis BS107]
gi|161389068|gb|EDQ13420.1| DNA-cytosine methyltransferase [Phaeobacter gallaeciensis BS107]
Length = 570
Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 32/92 (34%), Gaps = 21/92 (22%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV-------------KTYQANFPNTLIF 53
+ GIG E + F+SEI + Q +
Sbjct: 6 MCSGIG----APELAAPWVDWR--FASEIEGFPRAVLADRFGYRLPEDHNQGDPLLWSDM 59
Query: 54 GDIAKIKTQDI--PDHDVLLAGFPCQPFSQAG 83
+I +D P D+++AG PCQ FS AG
Sbjct: 60 TEITPDLLRDRGVPLPDLVVAGTPCQAFSVAG 91
>gi|238586055|ref|XP_002391053.1| hypothetical protein MPER_09571 [Moniliophthora perniciosa FA553]
gi|215455233|gb|EEB91983.1| hypothetical protein MPER_09571 [Moniliophthora perniciosa FA553]
Length = 494
Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55
L+ +LF G GG+ + + V+ ++ EI+P + +Y+AN P+T+++
Sbjct: 401 LRGLELFSGAGGLGTGMNSSGY---VDTKWAVEISPAAAMSYRANHPDTIVYCQ 451
>gi|225432124|ref|XP_002264226.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 712
Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 32/93 (34%), Gaps = 15/93 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF GIGG L L Q H S EI+ + + NT G++ +I
Sbjct: 585 LTMLSLFSGIGGAELTLHQLGIHLKG--VVSVEISETKRNILKKWWHNTGQTGELVQIDD 642
Query: 62 Q-------------DIPDHDVLLAGFPCQPFSQ 81
D ++ PC S+
Sbjct: 643 IQKLASSKLESLIEKFGGFDFVICQNPCTYSSR 675
>gi|326571789|gb|EGE21795.1| cytosine-specific methyltransferase [Moraxella catarrhalis BC7]
Length = 55
Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI 56
DLF GIGG ++ EC F+SE + + K +I
Sbjct: 4 FTFIDLFAGIGGFHFAMQ----AVGGECVFASEWDLNAQKKLFCQCCVYYQIMNI 54
>gi|265755712|ref|ZP_06090333.1| LOW QUALITY PROTEIN: site-specific DNA-methyltransferase
[Bacteroides sp. 3_1_33FAA]
gi|263234318|gb|EEZ19911.1| LOW QUALITY PROTEIN: site-specific DNA-methyltransferase
[Bacteroides sp. 3_1_33FAA]
Length = 296
Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 65 PDHDVLLAGFPCQPFSQAG 83
D+L GFPCQPFS AG
Sbjct: 2 GRIDILTGGFPCQPFSVAG 20
>gi|163759244|ref|ZP_02166330.1| C-5 cytosine-specific DNA methylase [Hoeflea phototrophica
DFL-43]
gi|162283648|gb|EDQ33933.1| C-5 cytosine-specific DNA methylase [Hoeflea phototrophica
DFL-43]
Length = 755
Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 25/83 (30%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG +E ++ +P +V + N + +
Sbjct: 6 IIDCFAGGGGASTGIEMA---LGRSPDYAINHDPVAVAMHAVNHPDSVHLCQNVYQVDPL 62
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ C+ FS+A
Sbjct: 63 DHFNRAHIGFAWFSPDCKHFSKA 85
>gi|261332311|emb|CBH15305.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 394
Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 28/85 (32%), Gaps = 12/85 (14%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D+F GIG L L + V+ + E N YS N + I +
Sbjct: 231 VVDMFAGIGYFTLPL---AINGGVKIVHALEKNKYSALYLAFNAVQNKVSDLIVIHCGDN 287
Query: 64 -------IPDHDVLLAG--FPCQPF 79
D ++ G C+ F
Sbjct: 288 RDMGSELCGRCDRVIMGYIPSCESF 312
>gi|297563371|ref|YP_003682345.1| hypothetical protein Ndas_4450 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847819|gb|ADH69839.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 211
Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 11/77 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DL+ G GG + + +I +Q N+P D + T+
Sbjct: 6 RLLDLYSGAGGAAMGYHLA----GFDVVG-VDI------HHQPNYPFEHHVADALEYVTE 54
Query: 63 DIPDHDVLLAGFPCQPF 79
+ D L CQ F
Sbjct: 55 HGHEFDALHGSPTCQTF 71
>gi|37693466|dbj|BAC99051.1| chloroplast-resident DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1344
Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49
D+F G GG+ L Q+ ++ E + + K Y N P+
Sbjct: 732 LDIFAGCGGLSEGLHQSGVSS---TLWAVEFDANAAKAYTENNPH 773
>gi|20278869|dbj|BAB91073.1| chloroplast-resident DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1344
Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49
D+F G GG+ L Q+ ++ E + + K Y N P+
Sbjct: 732 LDIFAGCGGLSEGLHQSGVSS---TLWAVEFDANAAKAYTENNPH 773
>gi|255579031|ref|XP_002530367.1| protein with unknown function [Ricinus communis]
gi|223530114|gb|EEF32028.1| protein with unknown function [Ricinus communis]
Length = 845
Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
DL+ G G + L + V+ ++ +IN ++
Sbjct: 278 LDLYSGCGAMSTGLCMGASLSGVKLVTKWAVDINAFAC 315
>gi|37039880|gb|AAM96952.1| DNA cytosine-5-methyltransferase [Prunus persica]
Length = 1564
Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 37/110 (33%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD- 63
D+F G GG+ L Q+ ++ E + ++ N P +L+F + + +
Sbjct: 1127 LDIFAGCGGLSNGLRQSGASI---TKWAIEYEEPAGDAFKLNHPESLVFINNCNVILRAV 1183
Query: 64 ---------------------------------IPDHDVLLAGFPCQPFS 80
D + G PC+ FS
Sbjct: 1184 MEKCGDTDDCIATSEAAELAASLDEEVKNDLPLPGQVDFINGGPPCRGFS 1233
>gi|194389584|dbj|BAG61753.1| unnamed protein product [Homo sapiens]
Length = 728
Score = 41.1 bits (95), Expect = 0.058, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV----KTYQANFPNTLIFGDIA 57
+++ LF I L L++ + +SE+ S+ ++ N +I
Sbjct: 513 IRVLSLFDDIATGYLVLKELGIKVG--KYVASEVCEESIAVGTVKHEGNIKYVNDVRNIT 570
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
K ++ D+++ G PC S
Sbjct: 571 KKNIEEWGPFDLVIGGSPCNDLSN 594
>gi|120610363|ref|YP_970041.1| C-5 cytosine-specific DNA methylase [Acidovorax citrulli AAC00-1]
gi|120588827|gb|ABM32267.1| C-5 cytosine-specific DNA methylase [Acidovorax citrulli AAC00-1]
Length = 710
Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI----FGDIAKI 59
I D F G GG LE F + +P ++ + N P+T ++ I
Sbjct: 17 IIDNFAGGGGTSTGLEAAFGRP---VDIAINHDPEALAMHAINHPHTQHLCESVWEVDPI 73
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
++ C+ FS+A
Sbjct: 74 AVTGNQPVGLVWLSPDCKHFSKA 96
>gi|294664029|ref|ZP_06729437.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292606198|gb|EFF49441.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 370
Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 31/91 (34%), Gaps = 14/91 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-------- 53
K+ DLF L E S E + + T +AN
Sbjct: 6 FKVIDLFA----GAGGLGVGAYQAGAEVAASVESDSVACDTLRANADIHGQVLEGDVSLL 61
Query: 54 --GDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
D+ + D V++ G PCQPFS+A
Sbjct: 62 SGKDVLTMARLSKGDVLVVVGGPPCQPFSKA 92
>gi|224137126|ref|XP_002327031.1| DNA methyltransferase [Populus trichocarpa]
gi|222835346|gb|EEE73781.1| DNA methyltransferase [Populus trichocarpa]
Length = 245
Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 15/84 (17%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEIN---PYSVKTYQANFPNTLIFGDIAKI--- 59
LF GIGG + L + + S EI+ ++ + +I I
Sbjct: 127 SLFSGIGGAEVALHRLGIPL--KNVVSVEISVSKRDVIRNWWEQANQKGNLIEITDIQTI 184
Query: 60 -------KTQDIPDHDVLLAGFPC 76
+ D+++ G PC
Sbjct: 185 NGSDIETWIRSFGGFDLVIGGSPC 208
>gi|186682875|ref|YP_001866071.1| C-5 cytosine-specific DNA methylase [Nostoc punctiforme PCC
73102]
gi|186465327|gb|ACC81128.1| C-5 cytosine-specific DNA methylase [Nostoc punctiforme PCC
73102]
Length = 1180
Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 4/81 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
KI + G+G + L ++ E + Y N + + + +
Sbjct: 5 FKIGSIASGMG-MHL---HGLKQIGGVPVWAIECDEAIAHCYHQNHKSEVYIKKVQDVAP 60
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
D+ D D+L+ C+ S A
Sbjct: 61 SDLADIDLLITTLSCKNASIA 81
>gi|326797283|ref|YP_004315103.1| DNA-cytosine methyltransferase [Marinomonas mediterranea MMB-1]
gi|326548047|gb|ADZ93267.1| DNA-cytosine methyltransferase [Marinomonas mediterranea MMB-1]
Length = 378
Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 11/73 (15%)
Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP-------DHDVL 70
E + + +I+ Y+ NFP T + + D +
Sbjct: 21 AELA----GFQTVAAVDIDETLQSAYRLNFPETNVLTADLAKTGRKFWSEHLNGLQVDGV 76
Query: 71 LAGFPCQPFSQAG 83
+ G PCQ +S+ G
Sbjct: 77 IGGPPCQGYSRMG 89
>gi|301621114|ref|XP_002939909.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Xenopus
(Silurana) tropicalis]
Length = 495
Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIA 57
+++ LF GI + L+ VE + +SE+ ++ + P + + +I
Sbjct: 217 IRVLSLFDGIATGLVSLKILKIQ--VEKYVASEVCKDAINVGKTRHPGEITYVGDVRNIT 274
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQ 81
+ + + D+++ G PC +
Sbjct: 275 RKQISEWGPFDLVIGGSPCNDLAV 298
>gi|124512074|ref|XP_001349170.1| modification methylase-like protein, putative [Plasmodium
falciparum 3D7]
gi|23498938|emb|CAD51016.1| modification methylase-like protein, putative [Plasmodium
falciparum 3D7]
Length = 706
Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 5/69 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI-NPYSVKTYQANFPNTLIFGDIAKIK 60
+K+ +L+CGIGG+ L Q FN+ +++I + I K
Sbjct: 4 IKVLELYCGIGGLHYSLLQAFNNF----VHANKITEKKCDTYKDGIHNHMSNNKSIEIHK 59
Query: 61 TQDIPDHDV 69
D +
Sbjct: 60 YHDCTLTCL 68
>gi|224071435|ref|XP_002303458.1| DNA methyltransferase [Populus trichocarpa]
gi|222840890|gb|EEE78437.1| DNA methyltransferase [Populus trichocarpa]
Length = 729
Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTL 51
L + DLF G GG+ L V+ ++ + + + ++ + N P T
Sbjct: 171 LTLLDLFSGCGGMSTGLCLGAKVSCVDLVTRWALDSDESACQSLKLNHPETH 222
Score = 34.1 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 13/46 (28%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
P + + + D DV+ G PCQ S
Sbjct: 318 WEPIEGLSNCEHSIRDFVREGFKSKILPLPGDADVICGGPPCQGIS 363
>gi|329851058|ref|ZP_08265815.1| modification methylase HphIA [Asticcacaulis biprosthecum C19]
gi|328839904|gb|EGF89476.1| modification methylase HphIA [Asticcacaulis biprosthecum C19]
Length = 557
Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 32/130 (24%), Gaps = 50/130 (38%)
Query: 4 ITDLFCGIGGIRLDL----EQTFNHRNVECFFSSEINPYS-------------------- 39
D+F G GG+ E ++ + E + E +P +
Sbjct: 11 FIDIFAGPGGLSEGFSRFAEFQQSNVSFESRLAIEKDPIAVQTLRLRSFFRQFAPGDVPD 70
Query: 40 ------------------VKTYQANFPNTLIFGDIAKIKTQDIP--------DHDVLLAG 73
K A+ I + VLL G
Sbjct: 71 EYYEVLRRKSSIQTLSEHAKWQSADDHVWQAELGIVEETELHQKLSERLGGASDWVLLGG 130
Query: 74 FPCQPFSQAG 83
PCQ +S G
Sbjct: 131 PPCQAYSLMG 140
>gi|218847945|ref|YP_002454784.1| type II DNA-methyltransferase, putative [Bacillus cereus G9842]
gi|218546076|gb|ACK98469.1| type II DNA-methyltransferase, putative [Bacillus cereus G9842]
Length = 463
Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + + G G T E+ + + NF + ++ D+ I
Sbjct: 126 ISLLSVCAGGGIGTASFVDTQY---FTPVAEIELEEDCCEAIRHNFSSFIMNCDVRDINV 182
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
P DV+ PC FS G
Sbjct: 183 V--PKVDVINCTIPCNNFSTLG 202
>gi|255072031|ref|XP_002499690.1| DNA methyltransferase [Micromonas sp. RCC299]
gi|226514952|gb|ACO60948.1| DNA methyltransferase [Micromonas sp. RCC299]
Length = 401
Score = 40.7 bits (94), Expect = 0.066, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 13/94 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFN---HRNVECFFSSEINPYSVKTYQANFPNTL-----IFG 54
K+ + + G+G +R LE+ +V S + + + Y AN+P+ +
Sbjct: 60 KMVEFYAGMGTMRWSLERALESDMGASVTALASIDNSEVANAVYLANYPDENASGVLMRR 119
Query: 55 DIAKIKTQD-----IPDHDVLLAGFPCQPFSQAG 83
++ + + + DV PCQP+++ G
Sbjct: 120 NVEHLSSVETLDARFGGADVWTLSPPCQPYTRKG 153
>gi|293570787|ref|ZP_06681836.1| cytosine-specific methyltransferase NlaX [Enterococcus faecium
E980]
gi|291609140|gb|EFF38413.1| cytosine-specific methyltransferase NlaX [Enterococcus faecium
E980]
Length = 310
Score = 40.7 bits (94), Expect = 0.066, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 65 PDHDVLLAGFPCQPFSQAG 83
D++ GFPCQ FS AG
Sbjct: 16 GRLDIITGGFPCQAFSLAG 34
>gi|160875076|ref|YP_001554392.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195]
gi|160860598|gb|ABX49132.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195]
Length = 516
Score = 40.7 bits (94), Expect = 0.066, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I D F G GG + + +P ++ + AN P TL + DI +
Sbjct: 5 IVDNFAGGGGASTGIAWA---IGRSVDIAINHDPDAIAMHSANHPETLHYCESVFDIDPV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ D+ C+ FS+A
Sbjct: 62 QATAGKPVDLAWFSPDCKHFSKA 84
>gi|309776146|ref|ZP_07671137.1| CPG DNA methylase [Erysipelotrichaceae bacterium 3_1_53]
gi|308916097|gb|EFP61846.1| CPG DNA methylase [Erysipelotrichaceae bacterium 3_1_53]
Length = 456
Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+I+ I D+P+ D+L FPCQ S+AG
Sbjct: 124 NISHIHAADLPEVDLLTYSFPCQDLSKAG 152
>gi|120610423|ref|YP_970101.1| C-5 cytosine-specific DNA methylase [Acidovorax citrulli AAC00-1]
gi|120588887|gb|ABM32327.1| C-5 cytosine-specific DNA methylase [Acidovorax citrulli AAC00-1]
Length = 669
Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI----FGDIAKI 59
I D F G GG LE F + +P ++ + N P+T D+ I
Sbjct: 17 IIDNFAGGGGTSTGLEAAFGRP---VDIAINHDPEALAMHAINHPHTQHLCESVWDVDPI 73
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
++ C+ FS+A
Sbjct: 74 AVTGNQPVGLVWLSPDCKHFSKA 96
>gi|325115599|emb|CBZ51154.1| hypothetical protein NCLIV_042270 [Neospora caninum Liverpool]
Length = 1119
Score = 40.7 bits (94), Expect = 0.068, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 15/37 (40%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
+ DLFCGIG L ++ + + N +
Sbjct: 849 TVVDLFCGIGYFSLAALTCAGVDRLKHLHACDWNRDA 885
>gi|297804242|ref|XP_002870005.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297315841|gb|EFH46264.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 40.7 bits (94), Expect = 0.068, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
+ DL+ G GG+ L V+ ++ + N +
Sbjct: 687 VLDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNMAAC 725
>gi|330797774|ref|XP_003286933.1| hypothetical protein DICPUDRAFT_150953 [Dictyostelium purpureum]
gi|325083099|gb|EGC36561.1| hypothetical protein DICPUDRAFT_150953 [Dictyostelium purpureum]
Length = 58
Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY 43
L++ + + GIGG+ L+++ E S +IN ++ Y
Sbjct: 18 LRVLEFYSGIGGMHYGLKESG--VKFEVVQSFDINTNAILNY 57
>gi|323703857|ref|ZP_08115492.1| DNA-cytosine methyltransferase [Desulfotomaculum nigrificans DSM
574]
gi|323531175|gb|EGB21079.1| DNA-cytosine methyltransferase [Desulfotomaculum nigrificans DSM
574]
Length = 409
Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 29/89 (32%), Gaps = 13/89 (14%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT---------LIFG 54
+ LF L+ E + Y ++T +AN +
Sbjct: 39 VISLFT----GGGGLDLGLEQAGFTTAAFVENDKYCIETIKANRNWPLVGNGDVTEITSY 94
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI K D +L G PCQPFS G
Sbjct: 95 DILKEANLSKGDVALLAGGAPCQPFSNLG 123
>gi|169977312|emb|CAQ18903.1| chromomethylase [Nicotiana sylvestris]
gi|169977314|emb|CAQ18904.1| chromomethylase [Nicotiana sylvestris]
gi|169977316|emb|CAQ18905.1| chromomethylase [Nicotiana sylvestris]
gi|169977318|emb|CAQ18906.1| chromomethylase [Nicotiana sylvestris]
Length = 741
Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFP 48
+ DL+ G G + L + V+ ++ ++N Y+ + + N P
Sbjct: 177 NLLDLYSGCGAMSTGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHP 224
>gi|27529842|dbj|BAC53936.1| chromomethylase-like protein [Nicotiana tabacum]
Length = 741
Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFP 48
+ DL+ G G + L + V+ ++ ++N Y+ + + N P
Sbjct: 177 NLLDLYSGCGAMSTGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHP 224
>gi|302186694|ref|ZP_07263367.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv.
syringae 642]
Length = 278
Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 19/63 (30%), Gaps = 6/63 (9%)
Query: 27 VECFFSSEINPYSVKTYQANFP------NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
+ E + Y+ + + + DV+ GFPCQ S
Sbjct: 22 WRTVCAVERDAYAAQVLAQRQNDGALPAFPIWSDVCSFDGKPWRGLVDVVSGGFPCQDIS 81
Query: 81 QAG 83
AG
Sbjct: 82 AAG 84
>gi|160876612|ref|YP_001555928.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195]
gi|160862134|gb|ABX50668.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195]
gi|315268808|gb|ADT95661.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS678]
Length = 516
Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG + + +P ++ + AN DI +
Sbjct: 5 IVDNFAGGGGASTGIAWA---IGRSVDIAINHDPDAIAMHSANHPETLHYCESVFDIDPV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ D+ C+ FS+A
Sbjct: 62 QATAGKPVDLAWFSPDCKHFSKA 84
>gi|160875117|ref|YP_001554433.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195]
gi|160860639|gb|ABX49173.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS195]
gi|315267308|gb|ADT94161.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS678]
Length = 516
Score = 40.7 bits (94), Expect = 0.071, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG + + +P ++ + AN DI +
Sbjct: 5 IVDNFAGGGGASTGIAWA---IGRSVDIAINHDPDAIAMHSANHPETLHYCESVFDIDPV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ D+ C+ FS+A
Sbjct: 62 QATAGKPVDLAWFSPDCKHFSKA 84
>gi|328857943|gb|EGG07057.1| hypothetical protein MELLADRAFT_85954 [Melampsora larici-populina
98AG31]
Length = 883
Score = 40.7 bits (94), Expect = 0.071, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 33/109 (30%), Gaps = 30/109 (27%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG------- 54
L +LF GIG L + F + + + +T NFP + IF
Sbjct: 359 LSHLELFGGIGSFSLGFSEHGLTDQKRTVF-IDWSVPACETASINFPKSTIFCADVNEIL 417
Query: 55 ----------------------DIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
I + D D++ AGFPC S
Sbjct: 418 CLMITGKTRQGKSSVRDLRTGLQIFPDQLPKPGDFDIITAGFPCGSHST 466
>gi|238786362|ref|ZP_04630295.1| Methylase [Yersinia bercovieri ATCC 43970]
gi|238712733|gb|EEQ04812.1| Methylase [Yersinia bercovieri ATCC 43970]
Length = 466
Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 18/95 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE-------------CFFSSEINPYSVKTYQANFP 48
+ + +LF G G + F ++ S E+NP +
Sbjct: 127 MNVCELFYGYGVLARSAHDGFKSNGIKLKNSVIVERERKYIDASIEMNPD-----MFDAE 181
Query: 49 NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +I I + ++ D+L AG PC S++G
Sbjct: 182 SIIIESAIQDVDIKNKMKVDLLFAGIPCTGASKSG 216
>gi|169544173|ref|YP_001692948.1| methylase [Yersinia enterocolitica]
gi|168218357|emb|CAP20100.1| methylase [Yersinia enterocolitica]
Length = 481
Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 18/95 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE-------------CFFSSEINPYSVKTYQANFP 48
+ + +LF G G + F ++ S E+NP +
Sbjct: 142 MNVCELFYGYGVLARSAHDGFKSNGIKLKNSVIVERERKYIDASIEMNPD-----MFDAE 196
Query: 49 NTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +I I + ++ D+L AG PC S++G
Sbjct: 197 SIIIESAIQDVDIKNKMKVDLLFAGIPCTGASKSG 231
>gi|317499855|ref|ZP_07958093.1| site-specific DNA methylase [Lachnospiraceae bacterium 8_1_57FAA]
gi|316898757|gb|EFV20790.1| site-specific DNA methylase [Lachnospiraceae bacterium 8_1_57FAA]
Length = 419
Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI----FGDIAKI 59
I D F G GG + +E + +P ++ ++ N PNTL +
Sbjct: 2 IIDCFAGGGGASVGIEMA---LGRSVDIAINHDPDAILMHKTNHPNTLHLTEDIFRVDLK 58
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
K ++ A C S+A
Sbjct: 59 KYVKGRHVALMWASPDCTSHSKA 81
>gi|2832630|emb|CAA16759.1| putative protein [Arabidopsis thaliana]
gi|7268696|emb|CAB78904.1| putative protein [Arabidopsis thaliana]
Length = 1171
Score = 40.7 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
+ DL+ G GG+ L V+ ++ + N +
Sbjct: 678 VLDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNTAAC 716
>gi|14583094|gb|AAK69757.1|AF383171_1 chromomethylase CMT2 [Arabidopsis thaliana]
Length = 1244
Score = 40.7 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
+ DL+ G GG+ L V+ ++ + N +
Sbjct: 678 VLDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNTAAC 716
>gi|42566945|ref|NP_193637.2| CMT2 (chromomethylase 2); DNA binding / chromatin binding
[Arabidopsis thaliana]
gi|322510132|sp|Q94F87|CMT2_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT2; AltName:
Full=Chromomethylase 2; AltName: Full=Protein
CHROMOMETHYLASE 2
gi|332658726|gb|AEE84126.1| chromomethylase 2 [Arabidopsis thaliana]
Length = 1295
Score = 40.7 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
+ DL+ G GG+ L V+ ++ + N +
Sbjct: 729 VLDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNTAAC 767
>gi|27497152|gb|AAO17342.1| methylase [Neisseria polysaccharea]
Length = 90
Score = 40.7 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE 34
DLF GIGG R+ ++ + E FSSE
Sbjct: 62 FTFIDLFAGIGGFRIAMQ----NLGGEYVFSSE 90
>gi|68655470|emb|CAJ01708.1| chromomethylase 1 [Hordeum vulgare subsp. vulgare]
Length = 735
Score = 40.3 bits (93), Expect = 0.077, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 5 TDLFCGIGGIRLDLE--QTFNHRNVECFFSSEINPYSVKTYQANFP 48
DL+ G GG+ L +E ++ ++N ++ K+ + N P
Sbjct: 167 LDLYSGCGGMSTGLCLGSALAGLKLETKWAVDLNSFACKSLKYNHP 212
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 8/46 (17%), Positives = 12/46 (26%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
P + + + DV+ G PCQ S
Sbjct: 299 WEPIENLSDCPLKIKEFVQEGYKRNILPQPGQVDVICGGPPCQGIS 344
>gi|218247299|ref|YP_002372670.1| Site-specific DNA methylase-like protein [Cyanothece sp. PCC
8801]
gi|257061366|ref|YP_003139254.1| Site-specific DNA methylase-like protein [Cyanothece sp. PCC
8802]
gi|218167777|gb|ACK66514.1| Site-specific DNA methylase-like protein [Cyanothece sp. PCC
8801]
gi|256591532|gb|ACV02419.1| Site-specific DNA methylase-like protein [Cyanothece sp. PCC
8802]
Length = 83
Score = 40.3 bits (93), Expect = 0.079, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI 52
+K LF G G L L Q + ++EI + ++ N+P+T +
Sbjct: 16 MKAISLFSGGGIGDLALGQA----GFKVVVANEILEDRAEVFRYNYPDTNM 62
>gi|145592040|ref|YP_001154042.1| DNA-cytosine methyltransferase [Pyrobaculum arsenaticum DSM
13514]
gi|145283808|gb|ABP51390.1| DNA-cytosine methyltransferase [Pyrobaculum arsenaticum DSM
13514]
Length = 318
Score = 40.3 bits (93), Expect = 0.079, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 8/86 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKI 59
M + D I F + + +++ + + ++ DI ++
Sbjct: 1 MYNVID----IFSGGGGFGLGFRQAGFKIRVALDVDRDAVRTYSANHVNTVVLQRDIREV 56
Query: 60 KTQD---IPDHDVLLAGFPCQPFSQA 82
+D + DVL+ PC+PF+ A
Sbjct: 57 SYEDLVKYGEADVLIGSPPCEPFTSA 82
>gi|302694677|ref|XP_003037017.1| hypothetical protein SCHCODRAFT_103476 [Schizophyllum commune H4-8]
gi|300110714|gb|EFJ02115.1| hypothetical protein SCHCODRAFT_103476 [Schizophyllum commune H4-8]
Length = 1190
Score = 40.3 bits (93), Expect = 0.079, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 32/112 (28%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV-----------ECFFSS-----EINPYSVKTYQA 45
L++ D+F G+G + L + + ++ N + +
Sbjct: 697 LRVLDVFGGVGAFSMGLADGSRCMKLTHLIEKSPSAAKTVIANFSGVQVYNQCANTVLEY 756
Query: 46 NF----------------PNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
P + +IA D DV++AGFPCQ S
Sbjct: 757 MVKRHDKVTLPSGDPVPAPMQIYDANIACPPPIKPGDIDVVVAGFPCQSHSL 808
>gi|209546991|ref|YP_002278909.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538235|gb|ACI58169.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 355
Score = 40.3 bits (93), Expect = 0.079, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 23 NHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQDIPDHD---VLLAGFPCQP 78
V+ + E +P + TY AN P + DIAK+ T D+ VL G PCQ
Sbjct: 18 KLSGVDVRAAVENHPSACLTYSANHPGATLLGTDIAKVATIDVGPRHQPLVLFGGPPCQG 77
Query: 79 FSQ 81
FS
Sbjct: 78 FST 80
>gi|171911252|ref|ZP_02926722.1| C-5 cytosine-specific DNA methylase [Verrucomicrobium spinosum
DSM 4136]
Length = 497
Score = 40.3 bits (93), Expect = 0.081, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 25/86 (29%), Gaps = 5/86 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEIN---PYSVKTYQANFPNTLIFGDI 56
++I DLFCG GG + + S + + +I
Sbjct: 6 IRIADLFCGGGGTTTGAKLACYDLGYNVDLVGVNHWERAVETSRANHPDSRHYCASLDNI 65
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ DVL A C S A
Sbjct: 66 NPRHIYGEGELDVLWASPECTNHSPA 91
>gi|313158881|gb|EFR58260.1| C-5 cytosine-specific DNA methylase [Alistipes sp. HGB5]
Length = 582
Score = 40.3 bits (93), Expect = 0.082, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 15/94 (15%)
Query: 4 ITDLFCGIGGIRLDLEQT--FNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKI- 59
DLFCG GG + + + ++ ++ AN P+ DI +
Sbjct: 11 YIDLFCGAGGTSTGVHLARHGGDPCAKVIACVNHDANAIASHAANHPDALHYTEDIRTLE 70
Query: 60 -----------KTQDIPDHDVLLAGFPCQPFSQA 82
+ Q VL A C FS+A
Sbjct: 71 LGPLAAHAARMRRQYPDAFVVLWASLECTNFSRA 104
>gi|50365120|ref|YP_053545.1| deoxycytosine methylase [Mesoplasma florum L1]
gi|50363676|gb|AAT75661.1| deoxycytosine methylase [Mesoplasma florum L1]
Length = 455
Score = 40.3 bits (93), Expect = 0.082, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 36/140 (25%), Gaps = 58/140 (41%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNH--RNVECFFSSEINPY------SVKTYQANFPNTLIF 53
+K+ + F GIG L+ + N E +SE + + ++ + +
Sbjct: 4 IKVFETFSGIGAQHKALDILKQNNYINYEVVGTSEWDIWANIAYNAIHNKNIDHTKNISE 63
Query: 54 GDIAKI--------------------------------------------------KTQD 63
+I +
Sbjct: 64 KEINDFLIKFTHSRDSKTPLTNEQVIKLPIIIKQNLYNSIKNSNNLGSIVGVTGNMISSQ 123
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
+ D+L FPCQ S AG
Sbjct: 124 VGKIDLLTYSFPCQDLSTAG 143
>gi|134296233|ref|YP_001119968.1| DNA-cytosine methyltransferase [Burkholderia vietnamiensis G4]
gi|134139390|gb|ABO55133.1| DNA-cytosine methyltransferase [Burkholderia vietnamiensis G4]
Length = 461
Score = 40.3 bits (93), Expect = 0.082, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 4/36 (11%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
+LF G GG+ L + + E E N ++
Sbjct: 33 IELFSGCGGLALGIARA----GFEHRLLVEWNAHAC 64
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 68 DVLLAGFPCQPFSQAG 83
D++ G PCQPFS AG
Sbjct: 147 DLIAGGPPCQPFSSAG 162
>gi|315585938|gb|ADU40319.1| site-specific DNA-methyltransferase [Helicobacter pylori 35A]
Length = 68
Score = 40.3 bits (93), Expect = 0.083, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 23/70 (32%), Gaps = 8/70 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIA 57
I + F G GG L + + + ++I+ + + + + I
Sbjct: 3 YNICEFFVGAGGSHLGF----IQQGFKTLYVNDIDKDALKTLLHNNKELKDAIIDQTSIT 58
Query: 58 KIKTQDIPDH 67
+I ++
Sbjct: 59 EIDPKNYKHR 68
>gi|156548692|ref|XP_001602591.1| PREDICTED: similar to prip interacting protein. pimt [Nasonia
vitripennis]
Length = 577
Score = 40.3 bits (93), Expect = 0.085, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 12/80 (15%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI- 59
ML D FCG GG + T ++ +I+P ++ + N + I I
Sbjct: 422 ML--IDAFCGAGGNSISFAFTCER-----VYAIDIDPKKIEMARHNARIYGVEDRIEFII 474
Query: 60 ----KTQDIPDHDVLLAGFP 75
+ DV+ P
Sbjct: 475 GDFFCLAERLFGDVVFLSPP 494
>gi|297841705|ref|XP_002888734.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata]
gi|297334575|gb|EFH64993.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata]
Length = 838
Score = 40.3 bits (93), Expect = 0.086, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTL 51
+ DL+ G G + L + ++ ++N ++ K+ N P T
Sbjct: 270 TLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLGHNHPETH 320
>gi|110739012|dbj|BAF01425.1| putative chromomethylase [Arabidopsis thaliana]
Length = 839
Score = 40.3 bits (93), Expect = 0.086, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFP 48
+ DL+ G G + L + ++ ++N ++ K+ Q N P
Sbjct: 270 TLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHP 317
>gi|14647157|gb|AAK71870.1| chromomethylase 3 [Arabidopsis thaliana]
Length = 839
Score = 40.3 bits (93), Expect = 0.086, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFP 48
+ DL+ G G + L + ++ ++N ++ K+ Q N P
Sbjct: 270 TLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHP 317
>gi|14583092|gb|AAK69756.1|AF383170_1 chromomethylase CMT3 [Arabidopsis thaliana]
Length = 839
Score = 40.3 bits (93), Expect = 0.086, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFP 48
+ DL+ G G + L + ++ ++N ++ K+ Q N P
Sbjct: 270 TLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHP 317
>gi|15222449|ref|NP_177135.1| CMT3 (chromomethylase 3); DNA (cytosine-5-)-methyltransferase
[Arabidopsis thaliana]
gi|110832800|sp|Q94F88|CMT3_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT3; AltName:
Full=Chromomethylase 3; AltName: Full=Protein
CHROMOMETHYLASE 3
gi|12325192|gb|AAG52543.1|AC013289_10 putative chromomethylase; 17383-22406 [Arabidopsis thaliana]
gi|332196852|gb|AEE34973.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana]
Length = 839
Score = 40.3 bits (93), Expect = 0.086, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFP 48
+ DL+ G G + L + ++ ++N ++ K+ Q N P
Sbjct: 270 TLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHP 317
>gi|323487264|ref|ZP_08092566.1| site-specific DNA methylase [Clostridium symbiosum WAL-14163]
gi|323399405|gb|EGA91801.1| site-specific DNA methylase [Clostridium symbiosum WAL-14163]
Length = 456
Score = 40.3 bits (93), Expect = 0.086, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKTQ 62
I D F G GG + +E + +P + + + DI ++ +
Sbjct: 5 IIDCFAGGGGASVGMEMALGRP---VDIAINHDPQALRMHKVNHPDTLHLTEDIFEVDLK 61
Query: 63 DI---PDHDVLLAGFPCQPFSQA 82
++ A C S+A
Sbjct: 62 QYVAGRHVALMWASPDCTSHSKA 84
>gi|313897986|ref|ZP_07831526.1| C-5 cytosine-specific DNA methylase [Clostridium sp. HGF2]
gi|312957258|gb|EFR38886.1| C-5 cytosine-specific DNA methylase [Clostridium sp. HGF2]
Length = 514
Score = 40.3 bits (93), Expect = 0.087, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI----FGDIAKI 59
I D F G GG +E + +P +++ ++ N P T D+ +
Sbjct: 14 IVDNFAGGGGASTGIELALGRP---IDIAINHDPDAIEMHKKNHPYTEHLCESVWDVDPV 70
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ + C FS+A
Sbjct: 71 QVCRGRKIALAWFSPDCTHFSKA 93
>gi|291614414|ref|YP_003524571.1| C-5 cytosine-specific DNA methylase [Sideroxydans lithotrophicus
ES-1]
gi|291584526|gb|ADE12184.1| C-5 cytosine-specific DNA methylase [Sideroxydans lithotrophicus
ES-1]
Length = 609
Score = 40.3 bits (93), Expect = 0.087, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIAKI 59
I D F G GG E + +P +V +QAN P T + ++
Sbjct: 15 IIDNFAGGGGASTGFELA---LGRHVDVAINHDPEAVSMHQANHPQTRHYCESVWEVDPR 71
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
L C+ FS+A
Sbjct: 72 TVHPGRKIGALWLSPDCKHFSKA 94
>gi|332284778|ref|YP_004416689.1| hypothetical protein PT7_1525 [Pusillimonas sp. T7-7]
gi|330428731|gb|AEC20065.1| hypothetical protein PT7_1525 [Pusillimonas sp. T7-7]
Length = 112
Score = 40.3 bits (93), Expect = 0.091, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55
+K DLF G+GG +Q +++ +V+ + AN P T
Sbjct: 1 MKAIDLFAGLGGNSEGAKQAGVP----VVWAANHWESAVQIHAANHPGTGHACQ 50
>gi|154324226|ref|XP_001561427.1| hypothetical protein BC1G_00512 [Botryotinia fuckeliana B05.10]
gi|150842741|gb|EDN17934.1| hypothetical protein BC1G_00512 [Botryotinia fuckeliana B05.10]
Length = 190
Score = 40.3 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 25/80 (31%), Gaps = 7/80 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNV-------ECFFSSEINPYSVKTYQANFPNTLIFGD 55
I DLF G GG + + +V +E N Y + N F
Sbjct: 32 TIIDLFAGAGGNSIAFALSNRWAHVIAIEKDPSVIACAENNAYVYGATNITWVNGDCFEY 91
Query: 56 IAKIKTQDIPDHDVLLAGFP 75
+ + P V+ A P
Sbjct: 92 LKTHASSINPSETVIFASPP 111
>gi|327356173|gb|EGE85030.1| cytosine-specific methyltransferase [Ajellomyces dermatitidis ATCC
18188]
Length = 1233
Score = 40.3 bits (93), Expect = 0.094, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 20/97 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57
L+ ++F G G LE+ ++ ++ E + + TY+AN N +
Sbjct: 658 LRALNIFSGGGSFDRGLEEGGA---IKNRWAVEWSAAPMLTYRANHENPEKVKLFLGSVN 714
Query: 58 KIKTQ-------------DIPDHDVLLAGFPCQPFSQ 81
Q + D +V+ AG PCQ +S
Sbjct: 715 DFLLQALQQKAEAGNLIAKLGDVEVISAGSPCQGYSN 751
>gi|261203805|ref|XP_002629116.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis SLH14081]
gi|239586901|gb|EEQ69544.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis SLH14081]
gi|239608866|gb|EEQ85853.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis ER-3]
Length = 1233
Score = 40.3 bits (93), Expect = 0.094, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 20/97 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57
L+ ++F G G LE+ ++ ++ E + + TY+AN N +
Sbjct: 658 LRALNIFSGGGSFDRGLEEGGA---IKNRWAVEWSAAPMLTYRANHENPEKVKLFLGSVN 714
Query: 58 KIKTQ-------------DIPDHDVLLAGFPCQPFSQ 81
Q + D +V+ AG PCQ +S
Sbjct: 715 DFLLQALQQKAEAGNLIAKLGDVEVISAGSPCQGYSN 751
>gi|296314673|ref|ZP_06864614.1| modification methylase HpaII [Neisseria polysaccharea ATCC 43768]
gi|296838500|gb|EFH22438.1| modification methylase HpaII [Neisseria polysaccharea ATCC 43768]
Length = 68
Score = 40.3 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE 34
DLF GIGG R+ ++ + E FSSE
Sbjct: 40 FTFIDLFAGIGGFRIAMQ----NLGGEYVFSSE 68
>gi|39941690|ref|XP_360382.1| hypothetical protein MGG_05756 [Magnaporthe oryzae 70-15]
gi|145022467|gb|EDK06487.1| hypothetical protein MGG_05756 [Magnaporthe oryzae 70-15]
Length = 249
Score = 40.3 bits (93), Expect = 0.097, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 3/62 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLF G GG + + + + E + ++ Q N I +
Sbjct: 75 TVVDLFAGAGGNAIAFALAGS---FDRVIAIERDADTLACAQHNAEVYGCGEWITWVHGD 131
Query: 63 DI 64
Sbjct: 132 CF 133
>gi|319764257|ref|YP_004128194.1| c-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans
BC]
gi|317118818|gb|ADV01307.1| C-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans
BC]
Length = 686
Score = 40.3 bits (93), Expect = 0.098, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAKI 59
I D F G GG LE+ F + +P ++ + N P + I
Sbjct: 17 IIDNFAGGGGTSTGLEKAFGRP---VDIAINHDPEALAMHAINHPRTLHLCESVWSVDPI 73
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ ++ C+ FS+A
Sbjct: 74 RVTRNQPVALVWLSPDCKHFSKA 96
>gi|213498016|emb|CAS84143.1| domains rearranged methyltransferase [Nicotiana tomentosiformis]
Length = 259
Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 8/79 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + L + S E + + ++ + T G++
Sbjct: 179 INVLSLFSGIGGGEVALYRLGIPL--NTVVSVEKSEVNRDIVRSWWEQTNQRGNLIHFND 236
Query: 62 QDIPDHDVL------LAGF 74
+ D L GF
Sbjct: 237 VQQLNGDRLEQLIESFGGF 255
>gi|134095045|ref|YP_001100120.1| putative modification methylase [Herminiimonas arsenicoxydans]
gi|133738948|emb|CAL61995.1| Putative modification methylase AgeI (Cytosine-specific
methyltransferase AgeI) [Herminiimonas arsenicoxydans]
Length = 523
Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 33/131 (25%), Gaps = 52/131 (39%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN--------------FPN 49
I DLF G GG+ + S+E+ + +T + P
Sbjct: 12 IVDLFAGPGGLGEGFSGLSKNA-FHIAISAEMEESAHQTLRLRAYYRLLKKKGVEALRPY 70
Query: 50 TLIFGDIAKIKTQDIPDHD-------------------------------------VLLA 72
L + + + D VL+
Sbjct: 71 YLFCNGVTALPYDEKSSPDWEEAGREALRLTLGDEDDNLRLDHLLKEMKIGADKPWVLIG 130
Query: 73 GFPCQPFSQAG 83
G PCQ +S G
Sbjct: 131 GPPCQAYSLVG 141
>gi|182437388|ref|YP_001825107.1| hypothetical protein SGR_3595 [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178465904|dbj|BAG20424.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 246
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 19/77 (24%), Gaps = 7/77 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ D F IGG + F +I I I+
Sbjct: 17 FRVLDAFSCIGGATRGYRRAFGPNC--HVTGVDI----QAQPDYCGDVFHQGDAIEYIRA 70
Query: 62 QDIPDHDVLLAGFPCQP 78
D + PCQ
Sbjct: 71 HGHK-FDFIHVSPPCQG 86
>gi|254252470|ref|ZP_04945788.1| Site-specific DNA methylase [Burkholderia dolosa AUO158]
gi|124895079|gb|EAY68959.1| Site-specific DNA methylase [Burkholderia dolosa AUO158]
Length = 669
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I D F G GG LE+ F + +P ++ + AN P T + D+ I
Sbjct: 17 IVDNFAGGGGASTGLERAFGRP---VDIAINHDPEALAMHAANHPRTKHYCESVFDVDPI 73
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ ++ C+ FS+A
Sbjct: 74 EITGNQPVGLVWLSPDCKHFSKA 96
>gi|307330098|ref|ZP_07609248.1| hypothetical protein StrviDRAFT_6933 [Streptomyces violaceusniger Tu
4113]
gi|306884241|gb|EFN15277.1| hypothetical protein StrviDRAFT_6933 [Streptomyces violaceusniger Tu
4113]
Length = 2641
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 6/84 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ ++F G GG+ + + E N + +I D+ +
Sbjct: 1855 YRGVEIFGGPGGMSAA--RALVDPGGDWVL-IEFN-RDAADTARAAGHFVICADVRTLDP 1910
Query: 62 QDIPDHDVL--LAGFPCQPFSQAG 83
+ VL PCQ S AG
Sbjct: 1911 RHPVLTRVLRFHGSPPCQTLSDAG 1934
>gi|290243028|ref|YP_003494698.1| C-5 cytosine-specific DNA methylase [Thioalkalivibrio sp. K90mix]
gi|288945533|gb|ADC73231.1| C-5 cytosine-specific DNA methylase [Thioalkalivibrio sp. K90mix]
Length = 463
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEIN-----PYSVKTYQANFPNTLIFG 54
++I L G G + + + V F++E + + + I G
Sbjct: 129 IRIGSLAHGGGVLDHAIHEGLEDAGVPAHLTFANEYDGGYLDASLSNNPIWSADSIAIEG 188
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ I+ + +P D+L+AG PC S++G
Sbjct: 189 PMQDIEWRKLPAIDLLVAGLPCTGASKSG 217
>gi|298677086|ref|NP_001177350.1| DNA methyltransferase 3 [Apis mellifera]
gi|296883331|gb|ADH84015.1| DNA methyltransferase 3 [Apis mellifera]
Length = 758
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 29/87 (33%), Gaps = 10/87 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVK----TYQANFPNTLIFGD 55
+++ LF +++SEI+ ++ + D
Sbjct: 471 IRVLSLFD----GLGTGLLVLLKLGFIVDAYYASEIDQDALMVTASHFGDRILQLGNVKD 526
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQA 82
I ++I D+L+ G PC S A
Sbjct: 527 ITCNTIKEIAPIDLLIGGSPCNDLSLA 553
>gi|315607602|ref|ZP_07882597.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
gi|315250785|gb|EFU30779.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
Length = 531
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFG------- 54
DLFCG GG +E + ++ ++QAN P+TL F
Sbjct: 8 YIDLFCGAGGTSTGVEHAKLDGTKCARVVACVNHDANAIASHQANHPDTLHFTEDIRTLD 67
Query: 55 ------DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ +++ + VL A C FS+A
Sbjct: 68 LTALTAHLNRMRMKYPSALVVLWASLECTNFSKA 101
>gi|299141669|ref|ZP_07034805.1| DNA cytosine methyltransferase [Prevotella oris C735]
gi|298577005|gb|EFI48875.1| DNA cytosine methyltransferase [Prevotella oris C735]
Length = 531
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFG------- 54
DLFCG GG +E + ++ ++QAN P+TL F
Sbjct: 8 YIDLFCGAGGTSTGVEHAKLDGTKCARVVACVNHDANAIASHQANHPDTLHFTEDIRTLD 67
Query: 55 ------DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ +++ + VL A C FS+A
Sbjct: 68 LTGLTAHLNRMRMKYPSALVVLWASLECTNFSKA 101
>gi|225628987|ref|ZP_03787021.1| Modification methylase HgiDI [Brucella ceti str. Cudo]
gi|261319385|ref|ZP_05958582.1| modification methylase [Brucella pinnipedialis B2/94]
gi|261756709|ref|ZP_06000418.1| DNA-cytosine methyltransferase [Brucella sp. F5/99]
gi|265986615|ref|ZP_06099172.1| modification methylase [Brucella pinnipedialis M292/94/1]
gi|225616833|gb|EEH13881.1| Modification methylase HgiDI [Brucella ceti str. Cudo]
gi|261298608|gb|EEY02105.1| modification methylase [Brucella pinnipedialis B2/94]
gi|261736693|gb|EEY24689.1| DNA-cytosine methyltransferase [Brucella sp. F5/99]
gi|264658812|gb|EEZ29073.1| modification methylase [Brucella pinnipedialis M292/94/1]
Length = 274
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 65 PDHDVLLAGFPCQPFSQAG 83
D++ G PCQ +S AG
Sbjct: 30 MAPDLITGGPPCQDYSVAG 48
>gi|294776807|ref|ZP_06742270.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus PC510]
gi|294449283|gb|EFG17820.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus PC510]
Length = 334
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 65 PDHDVLLAGFPCQPFSQAG 83
D++ G PCQ FS AG
Sbjct: 14 GKVDLVAGGPPCQGFSMAG 32
>gi|303278772|ref|XP_003058679.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459839|gb|EEH57134.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 493
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV----ECFFSSEINPYSVKTYQANFPNTLIFG 54
LK+ + F G GG+ + + T V E + +I + TY NFP +
Sbjct: 223 LKVLETFAGAGGLHMHGDATHGPSGVAVALESVAAIDIVKDACDTYSHNFPGVNVMH 279
>gi|167045163|gb|ABZ09825.1| putative C-5 cytosine-specific DNA methylase [uncultured marine
microorganism HF4000_APKG8K5]
Length = 340
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 36/136 (26%), Gaps = 56/136 (41%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN----VECFFSSEINPYS---------VKTYQANFPNT 50
+ DLF G GG+ + + + S E NP + V+ + +
Sbjct: 10 VIDLFAGPGGLSEGFSRFSSFKGSEVDFRIRLSIEKNPIAKRTLQLRSFVRQFPEDELPE 69
Query: 51 LIFGDIAK-------------------------------------------IKTQDIPDH 67
+ + I + + H
Sbjct: 70 VYYNYIRCTDKKDKEKLLKVLQGFPEWQRADHEAWEAELGKIAPEILHKRIHEALNGASH 129
Query: 68 DVLLAGFPCQPFSQAG 83
VLL G PCQ +S G
Sbjct: 130 WVLLGGPPCQVYSNVG 145
>gi|332884377|gb|EGK04642.1| hypothetical protein HMPREF9456_03404 [Dysgonomonas mossii DSM
22836]
Length = 212
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 7/81 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY-SVKTYQANFPNTLIFGDIAKIK 60
+KI + + GIGG R N + E +P + +T+I GD +
Sbjct: 1 MKILNCYAGIGGNR------KLWGNEREITAVEFDPKIAAIYQDLYPNDTVIVGDAHQYL 54
Query: 61 TQDIPDHDVLLAGFPCQPFSQ 81
+ + D + PC S
Sbjct: 55 LEHYQEFDFIWCSPPCPTHSI 75
>gi|182438469|ref|YP_001826188.1| putative 5-methylcytosine methyltransferase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178466985|dbj|BAG21505.1| putative 5-methylcytosine methyltransferase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 317
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 8/78 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57
L+ D+ G GG+ L E+ E + + +T + N P + D
Sbjct: 4 LRFVDVCAGAGGLALGFEKA----GFEPVLLLDKKRIACETLRMNRPTWNVLEADLLDFD 59
Query: 58 KIKTQDIPDHDVLLAGFP 75
+ + D D+L AG P
Sbjct: 60 PAEHRQTYDVDLLSAGLP 77
>gi|196047975|ref|ZP_03115153.1| C-5 cytosine-specific DNA methylase [Bacillus cereus 03BB108]
gi|196021231|gb|EDX59960.1| C-5 cytosine-specific DNA methylase [Bacillus cereus 03BB108]
Length = 471
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG +E + + +P ++ ++ N ++
Sbjct: 10 IVDSFAGGGGASTGIELA---TGLPVDIAINHDPDAIAMHKVNHPDTEHYCESVWEVDPR 66
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
K + C+ FS+A
Sbjct: 67 KAVKGRKVALCWFSPDCKHFSKA 89
>gi|154310415|ref|XP_001554539.1| hypothetical protein BC1G_07127 [Botryotinia fuckeliana B05.10]
gi|150851459|gb|EDN26652.1| hypothetical protein BC1G_07127 [Botryotinia fuckeliana B05.10]
Length = 2323
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 29/89 (32%), Gaps = 21/89 (23%)
Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD---------- 63
L + + +E FS EI+P + NF N I DI ++ +
Sbjct: 118 FSEGLRKRGHDFRIEHVFSCEIDPAKQSYIRRNFHNVPILRDITEVFEWEGNPEKIGFMT 177
Query: 64 -----------IPDHDVLLAGFPCQPFSQ 81
DV++ G C +S
Sbjct: 178 TAFGRTYALPAPGTVDVIIVGTSCTSYSN 206
>gi|15678523|ref|NP_275638.1| modification methyltransferase, cytosine-specific
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2621566|gb|AAB85001.1| modification methyltransferase, cytosine-specific
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 413
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 34/127 (26%), Gaps = 52/127 (40%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD--------- 55
D+F G GG+ + E++ +++T + + D
Sbjct: 7 IDIFAGAGGLTEGF----LRSDYTFVSHIEMDRDAIQTLETRGLYHHLQSDGDPEDYTEY 62
Query: 56 -----------------------------------IAKIKTQDIPD----HDVLLAGFPC 76
I I+++ D ++ G PC
Sbjct: 63 VNGEIGREELFRRYPDFDSELYMNLELTEENVDRVIETIRSKMNDMGTVSVDGIIGGPPC 122
Query: 77 QPFSQAG 83
Q +S AG
Sbjct: 123 QAYSYAG 129
>gi|75152372|sp|Q8H4D4|TYW23_ORYSJ RecName: Full=tRNA wybutosine-synthesizing protein 2/3/4; Includes:
RecName: Full=tRNA wybutosine-synthesizing protein 3
homolog; Includes: RecName: Full=tRNA wybutosine
synthesizing protein 2 homolog
gi|23616996|dbj|BAC20692.1| MET-10+related protein-like [Oryza sativa Japonica Group]
Length = 1043
Score = 39.5 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
+ DLF GIG L N + ++ E NP++
Sbjct: 887 VVDLFAGIGYFVLPF---LVKANAKLVYACEWNPHA 919
>gi|296814932|ref|XP_002847803.1| DNA methyltransferase Dim-2 [Arthroderma otae CBS 113480]
gi|238840828|gb|EEQ30490.1| DNA methyltransferase Dim-2 [Arthroderma otae CBS 113480]
Length = 1099
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 18/96 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN------------ 49
LK +LF G G LE ++ ++ E + + TY+AN PN
Sbjct: 639 LKALNLFSGGGTFDRGLE---EGTAIQSKWAVEWSLPQMLTYRANHPNGKDLKLFCGSVN 695
Query: 50 ---TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
I + ++ AG PCQ + A
Sbjct: 696 DYLFQAIQGNENEYIARIGEVQIISAGSPCQGYCSA 731
>gi|266623773|ref|ZP_06116708.1| putative C-5 cytosine-specific DNA methylase [Clostridium
hathewayi DSM 13479]
gi|288864409|gb|EFC96707.1| putative C-5 cytosine-specific DNA methylase [Clostridium
hathewayi DSM 13479]
Length = 456
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-LIFGDIAKIKTQ 62
I D F G GG + +E + +P +++ ++ N P+T + DI K+ +
Sbjct: 5 IIDCFAGGGGASVGIEMALGRP---VDIAINHDPQAIRMHKVNHPDTLHLTEDIFKVDLK 61
Query: 63 DI---PDHDVLLAGFPCQPFSQA 82
++ A C S+A
Sbjct: 62 KYVAGRHVALMWASPDCTSHSKA 84
>gi|301321463|gb|ADK70106.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 493
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 8/61 (13%)
Query: 31 FSSEINPYSVKTYQANFPNTLIFG--------DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ + N +++T++ N P + I IK ++++ G PCQ FS
Sbjct: 2 LAVDFNKSALETFKHNMPWSDIICGDITNESIRQEIIKRATKLKVNMIIGGPPCQGFSNK 61
Query: 83 G 83
G
Sbjct: 62 G 62
>gi|222637134|gb|EEE67266.1| hypothetical protein OsJ_24443 [Oryza sativa Japonica Group]
Length = 1083
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
+ DLF GIG L N + ++ E NP++
Sbjct: 927 VVDLFAGIGYFVLPF---LVKANAKLVYACEWNPHA 959
>gi|218199710|gb|EEC82137.1| hypothetical protein OsI_26187 [Oryza sativa Indica Group]
Length = 1083
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
+ DLF GIG L N + ++ E NP++
Sbjct: 927 VVDLFAGIGYFVLPF---LVKANAKLVYACEWNPHA 959
>gi|254711754|ref|ZP_05173565.1| DNA-cytosine methyltransferase [Brucella pinnipedialis B2/94]
gi|256029614|ref|ZP_05443228.1| DNA-cytosine methyltransferase [Brucella pinnipedialis M292/94/1]
gi|260167298|ref|ZP_05754109.1| DNA-cytosine methyltransferase [Brucella sp. F5/99]
Length = 258
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 65 PDHDVLLAGFPCQPFSQAG 83
D++ G PCQ +S AG
Sbjct: 14 MAPDLITGGPPCQDYSVAG 32
>gi|327279228|ref|XP_003224359.1| PREDICTED: trimethylguanosine synthase-like [Anolis carolinensis]
Length = 943
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I D FCG+GG + + +I+P ++ N + I I
Sbjct: 786 IVDAFCGVGGNSIQFALAGKR-----VIAIDIDPVKIRLAHNNAEVYGVADQIEFICGDF 840
Query: 64 IP-----DHDVLLAGFP 75
+ D++ P
Sbjct: 841 MKLASSLKGDIVFLSPP 857
>gi|318085426|gb|ADV39895.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp.
enterica]
Length = 273
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
L + LF G G + + F+ + + E+ + + AN P I
Sbjct: 124 LSVCSLFHGGGVLDKAIHAGFHKAGIASAISVAVEMEGKYLDSSLANNPELWNEDSIVIE 183
Query: 60 KTQD-------IPDHDVLLAGFPCQPFSQAG 83
P DVL+ G PC S++G
Sbjct: 184 SPIQAVNLSKRPPQVDVLMGGIPCTGASKSG 214
>gi|296491874|ref|YP_003662339.1| putative DNA (cytosine-5-)-methyltransferase [Xenorhabdus
nematophila ATCC 19061]
gi|289176759|emb|CBJ92924.1| putative DNA (cytosine-5-)-methyltransferase [Xenorhabdus
nematophila ATCC 19061]
Length = 575
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
L + LF G G + + F+ + + E+ + + AN P I
Sbjct: 158 LSVCSLFHGGGVLDKAIHAGFHKAGIASAISVAVEMEGKYLDSSLANNPELWNEDSIVIE 217
Query: 60 KTQD-------IPDHDVLLAGFPCQPFSQAG 83
P DVL+ G PC S++G
Sbjct: 218 SPIQAVNLSKRPPQVDVLMGGIPCTGASKSG 248
>gi|258624119|ref|ZP_05719069.1| C-5 cytosine-specific DNA methylase [Vibrio mimicus VM603]
gi|258583550|gb|EEW08349.1| C-5 cytosine-specific DNA methylase [Vibrio mimicus VM603]
Length = 333
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
L + LF G G + + F+ + + E+ + + AN P I
Sbjct: 124 LSVCSLFHGGGVLDKAIHAGFHKAGIASAISVAVEMEGKYLDSSLANNPELWNEDSIVIE 183
Query: 60 KTQD-------IPDHDVLLAGFPCQPFSQAG 83
P DVL+ G PC S++G
Sbjct: 184 SPIQAVNLSKRPPQVDVLMGGIPCTGASKSG 214
>gi|163644909|gb|ABY28346.1| putative C-5 cytosine-specific DNA methylase [Vibrio cholerae O139]
Length = 285
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
L + LF G G + + F+ + + E+ + + AN P I
Sbjct: 124 LSVCSLFHGGGVLDKAIHAGFHKAGIASAISVAVEMEGKYLDSSLANNPELWNEDSIVIE 183
Query: 60 KTQD-------IPDHDVLLAGFPCQPFSQAG 83
P DVL+ G PC S++G
Sbjct: 184 SPIQAVNLSKRPPQVDVLMGGIPCTGASKSG 214
>gi|118601986|ref|YP_908686.1| cytosine-specific DNA methylase [Photobacterium damselae subsp.
piscicida]
gi|118614724|ref|YP_908507.1| cytosine-specific DNA methylase [Photobacterium damselae subsp.
piscicida]
gi|134044487|ref|YP_001101821.1| C-5 cytosine-specific DNA methylase [Yersinia ruckeri]
gi|134044859|ref|YP_001102203.1| C-5 cytosine-specific DNA methylase [Yersinia pestis biovar
Orientalis str. IP275]
gi|134047248|ref|YP_001101999.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|165937989|ref|ZP_02226549.1| cytosine-specific DNA methylase [Yersinia pestis biovar Orientalis
str. IP275]
gi|229516190|ref|ZP_04405639.1| site-specific DNA methylase [Vibrio cholerae RC9]
gi|237640283|ref|YP_002891138.1| Dcm [Escherichia coli]
gi|237810027|ref|YP_002894466.1| Dcm [Escherichia coli]
gi|237810223|ref|YP_002894662.1| Dcm [Salmonella enterica]
gi|118596815|dbj|BAF38119.1| cytosine-specific DNA methylase [Photobacterium damselae subsp.
piscicida]
gi|118596995|dbj|BAF38298.1| cytosine-specific DNA methylase [Photobacterium damselae subsp.
piscicida]
gi|133904850|gb|ABO40867.1| C-5 cytosine-specific DNA methylase [Yersinia ruckeri]
gi|133905167|gb|ABO41182.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|133905393|gb|ABO42155.1| C-5 cytosine-specific DNA methylase [Yersinia pestis biovar
Orientalis str. IP275]
gi|165914012|gb|EDR32629.1| cytosine-specific DNA methylase [Yersinia pestis biovar Orientalis
str. IP275]
gi|229346840|gb|EEO11809.1| site-specific DNA methylase [Vibrio cholerae RC9]
gi|229561502|gb|ACQ77705.1| Dcm [Escherichia coli]
gi|229561707|gb|ACQ77909.1| Dcm [Salmonella enterica]
gi|229561882|gb|ACQ78083.1| Dcm [Escherichia coli]
gi|324008172|gb|EGB77391.1| C-5 cytosine-specific DNA methylase [Escherichia coli MS 57-2]
gi|327536569|gb|AEA95402.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp.
enterica serovar Dublin]
gi|332144438|dbj|BAK19658.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp.
enterica serovar Typhimurium]
Length = 541
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
L + LF G G + + F+ + + E+ + + AN P I
Sbjct: 124 LSVCSLFHGGGVLDKAIHAGFHKAGIASAISVAVEMEGKYLDSSLANNPELWNEDSIVIE 183
Query: 60 KTQD-------IPDHDVLLAGFPCQPFSQAG 83
P DVL+ G PC S++G
Sbjct: 184 SPIQAVNLSKRPPQVDVLMGGIPCTGASKSG 214
>gi|297380299|gb|ADI35186.1| DNA-cytosine methyltransferase [Helicobacter pylori v225d]
Length = 264
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+IK D+PD DVL++GFPCQ FS G
Sbjct: 1 MRIKPNDLPDFDVLISGFPCQAFSING 27
>gi|157825194|ref|YP_001492914.1| site-specific DNA methylase [Rickettsia akari str. Hartford]
gi|157799152|gb|ABV74406.1| Site-specific DNA methylase [Rickettsia akari str. Hartford]
Length = 93
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 31 FSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
FSS+I + Y+ ++G+I +I IP HD+L AGFP Q FS
Sbjct: 3 FSSDIGKDVQEAYK-RNLGDKLYGNITEISAHKIPKHDILCAGFPYQSFSI 52
>gi|254825325|ref|ZP_05230326.1| deoxycytosine methylase [Listeria monocytogenes FSL J1-194]
gi|255521307|ref|ZP_05388544.1| modification methylase, putative [Listeria monocytogenes FSL
J1-175]
gi|293594568|gb|EFG02329.1| deoxycytosine methylase [Listeria monocytogenes FSL J1-194]
Length = 385
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 37/133 (27%), Gaps = 54/133 (40%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF------- 53
MLK+ + F GIG + LE+ + E + E + ++ Y N
Sbjct: 1 MLKVVEAFSGIGAQKQALEKL--NIEHEIISTIEWDINAIYAYDIMHHNDNAPSDLSKSE 58
Query: 54 --------------------------------------------GDIAKIKTQDIP-DHD 68
DI ++ IP D D
Sbjct: 59 ILERLSNVTLSPDGKKPFSNHGFQRLKEEKLQKLYAAINRNRNLCDITQVTGDMIPGDTD 118
Query: 69 VLLAGFPCQPFSQ 81
+L FPCQ S
Sbjct: 119 LLTYSFPCQDLSV 131
>gi|242348041|ref|YP_002995602.1| C-5 cytosine-specific DNA methylase [Aeromonas hydrophila]
gi|224831860|gb|ACN66991.1| C-5 cytosine-specific DNA methylase [Aeromonas hydrophila]
Length = 541
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
L + LF G G + + F+ + + E+ + + AN P I
Sbjct: 124 LSVCSLFHGGGVLDKAIHAGFHKSGIASAISVAVEMEGKYLDSSLANNPELWNEDSIVIE 183
Query: 60 KTQD-------IPDHDVLLAGFPCQPFSQAG 83
P DVL+ G PC S++G
Sbjct: 184 SPIQAVNLSKRPPQVDVLMGGIPCTGASKSG 214
>gi|304409175|ref|ZP_07390796.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS183]
gi|307303178|ref|ZP_07582933.1| C-5 cytosine-specific DNA methylase [Shewanella baltica BA175]
gi|304352996|gb|EFM17393.1| C-5 cytosine-specific DNA methylase [Shewanella baltica OS183]
gi|306913538|gb|EFN43960.1| C-5 cytosine-specific DNA methylase [Shewanella baltica BA175]
Length = 284
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I D F G GG + + +P ++ + AN P TL + DI +
Sbjct: 5 IVDNFAGGGGASTGIAWA---IGRSVDIAINHDPDAIAMHSANHPETLHYCESVFDIDPV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ D+ C+ FS+A
Sbjct: 62 QATAGKPVDLAWFSPDCKHFSKA 84
>gi|83645622|ref|YP_434057.1| site-specific DNA methylase [Hahella chejuensis KCTC 2396]
gi|83633665|gb|ABC29632.1| Site-specific DNA methylase [Hahella chejuensis KCTC 2396]
Length = 555
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK----TYQANFPNTLIFGDIAKI 59
+ D F G GG +EQ + +P +++ + +I
Sbjct: 24 VVDNFAGGGGASTGIEQA---IGRSVDIAINHDPEAIELHKLNHPQTEHYCESVWNIDPR 80
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ + C+ FS+A
Sbjct: 81 EVCKGRPVGLAWFSPDCKHFSRA 103
>gi|120599327|ref|YP_963901.1| C-5 cytosine-specific DNA methylase [Shewanella sp. W3-18-1]
gi|120559420|gb|ABM25347.1| C-5 cytosine-specific DNA methylase [Shewanella sp. W3-18-1]
Length = 556
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I D F G GG + + + ++ + AN P TL + D+ +
Sbjct: 5 IVDNFAGGGGASTGMAWA---LGRSVDIAINHDQDAIAMHSANHPETLHYCESVFDVEPL 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ D+ C+ FS+A
Sbjct: 62 QATAGKPVDLAWFSPDCKHFSKA 84
>gi|294644820|ref|ZP_06722563.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CC 2a]
gi|292639853|gb|EFF58128.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CC 2a]
Length = 487
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 15/94 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFG------- 54
DLFCG GG +E + + ++ ++ AN P+ L F
Sbjct: 8 YIDLFCGAGGTSTGVESARIDGKQCAKVIACVNHDANAIASHAANHPDALHFTEDIRTLE 67
Query: 55 ------DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+AK K Q VL A C FS+A
Sbjct: 68 LSPLIEHLAKCKAQYPGAAVVLWASLECTNFSKA 101
>gi|229188078|ref|ZP_04315163.1| Cytosine-specific methyltransferase [Bacillus cereus BGSC 6E1]
gi|228595388|gb|EEK53123.1| Cytosine-specific methyltransferase [Bacillus cereus BGSC 6E1]
Length = 318
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66
+F GIG R L + + + +A ++ ++
Sbjct: 1 MFGGIGAPRKALVNLGIDHK-----AIDYVEWQANRVKAYNALYDHLHKPQDVRGWNLKP 55
Query: 67 HDVLLAGFPCQPFSQA 82
D+L+ G PCQ S+A
Sbjct: 56 -DILVHGSPCQDNSRA 70
>gi|303312089|ref|XP_003066056.1| trimethylguanosine synthase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240105718|gb|EER23911.1| trimethylguanosine synthase, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 240
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 26/82 (31%), Gaps = 13/82 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D F G+GG + ++ E +P S++ + N + I +
Sbjct: 77 VIDTFAGVGGNAIAF---ARSNKWRRVYAIEKDPASLQCAKHNAKIYGVEDKITWFQGDC 133
Query: 64 IP----------DHDVLLAGFP 75
+ V+ A P
Sbjct: 134 FEILKTQLKDLAPYSVIFASPP 155
>gi|313113251|ref|ZP_07798865.1| hypothetical protein HMPREF9436_00710 [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310624430|gb|EFQ07771.1| hypothetical protein HMPREF9436_00710 [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 66
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
L LF GIGGI L E E + +++P F DI +
Sbjct: 3 LTHFSLFSGIGGIDLAAEAA----GFTSVCQCEWAAFPAAVLASHWPEVPRFQDITTV 56
>gi|333024419|ref|ZP_08452483.1| hypothetical protein STTU_1923 [Streptomyces sp. Tu6071]
gi|332744271|gb|EGJ74712.1| hypothetical protein STTU_1923 [Streptomyces sp. Tu6071]
Length = 244
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLFC GG + + ++ + + +
Sbjct: 16 RLLDLFCCAGGAATGYARA----GFDVVG-VDV-ADRPNYPYTWHRADALAFLTRLLDSG 69
Query: 63 DIPDHDVLLAGFPCQP 78
+I D + A PCQ
Sbjct: 70 EIAGFDAVHASPPCQA 85
>gi|297737359|emb|CBI26560.3| unnamed protein product [Vitis vinifera]
Length = 847
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
L + D++ G GG+ L V+ ++ +IN +
Sbjct: 278 LALLDIYSGCGGMSTGLCLGAKLSGVDLVTRWALDINKSAC 318
Score = 34.1 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 20/72 (27%), Gaps = 5/72 (6%)
Query: 9 CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHD 68
G G++ + + + P + + + D D
Sbjct: 402 SGKHGLKFQARWAGHGPSEDT-----WEPIEGLSKCQDLIQDFVLKGFKAKILPRPGDAD 456
Query: 69 VLLAGFPCQPFS 80
V+ G PCQ S
Sbjct: 457 VICGGPPCQGIS 468
>gi|225454840|ref|XP_002274960.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 1143
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
L + D++ G GG+ L V+ ++ +IN +
Sbjct: 574 LALLDIYSGCGGMSTGLCLGAKLSGVDLVTRWALDINKSAC 614
Score = 34.1 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 20/72 (27%), Gaps = 5/72 (6%)
Query: 9 CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHD 68
G G++ + + + P + + + D D
Sbjct: 698 SGKHGLKFQARWAGHGPSEDT-----WEPIEGLSKCQDLIQDFVLKGFKAKILPRPGDAD 752
Query: 69 VLLAGFPCQPFS 80
V+ G PCQ S
Sbjct: 753 VICGGPPCQGIS 764
>gi|282896697|ref|ZP_06304705.1| Res [Raphidiopsis brookii D9]
gi|281198415|gb|EFA73303.1| Res [Raphidiopsis brookii D9]
Length = 244
Score = 39.1 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHR 25
+++ DLF G GG+ L +
Sbjct: 168 IMRTVDLFSGCGGLSLGFQNVGKDF 192
>gi|308805380|ref|XP_003080002.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri]
gi|116058461|emb|CAL53650.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri]
Length = 394
Score = 39.1 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ +++CGIG + L + R ++NP + Y N + ++A + +
Sbjct: 20 VAEMYCGIGVMSLAMRWVRRVRARTVVAY-DLNPNACDAYARNHGTRPLAKNLAGVSMEA 78
Query: 64 IPDH--DVLLAGFPCQPFSQAG 83
+ + L PCQPF++ G
Sbjct: 79 LGKIGAEAWLMSPPCQPFTRQG 100
>gi|22328346|ref|NP_567268.2| Met-10+ like family protein / kelch repeat-containing protein
[Arabidopsis thaliana]
gi|75162488|sp|Q8W4K1|TYW23_ARATH RecName: Full=tRNA wybutosine-synthesizing protein 2/3/4; Includes:
RecName: Full=tRNA wybutosine-synthesizing protein 3
homolog; Includes: RecName: Full=tRNA wybutosine
synthesizing protein 2 homolog
gi|17064868|gb|AAL32588.1| Unknown protein [Arabidopsis thaliana]
gi|30725408|gb|AAP37726.1| At4g04670 [Arabidopsis thaliana]
gi|332657010|gb|AEE82410.1| tRNA wybutosine synthesizing protein 2-like protein [Arabidopsis
thaliana]
Length = 995
Score = 39.1 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
+ DLF GIG L + ++ E NP+++
Sbjct: 841 VVDLFAGIGYFVLPF---LVRAKAKLVYACEWNPHAI 874
>gi|153815830|ref|ZP_01968498.1| hypothetical protein RUMTOR_02075 [Ruminococcus torques ATCC
27756]
gi|145846855|gb|EDK23773.1| hypothetical protein RUMTOR_02075 [Ruminococcus torques ATCC
27756]
Length = 91
Score = 39.1 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI----FGDIAKI 59
I D F G GG + +E + +P ++ ++ N PNTL +
Sbjct: 6 IIDCFAGGGGASVGIEMA---LGRSVDIAINHDPDAILMHKTNHPNTLHLTEDIFRVDLK 62
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
K ++ A C S+A
Sbjct: 63 KYVKGRHVALMWASPDCTSHSKA 85
>gi|320040035|gb|EFW21969.1| RNA methylase [Coccidioides posadasii str. Silveira]
Length = 240
Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 26/82 (31%), Gaps = 13/82 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D F G+GG + ++ E +P S++ + N + I +
Sbjct: 77 VIDTFAGVGGNAIAF---ARSNKWRRVYAIEKDPASLQCAKHNAKIYGVEDKITWFQGDC 133
Query: 64 IP----------DHDVLLAGFP 75
+ V+ A P
Sbjct: 134 FEILKTQLKDLAPYSVIFASPP 155
>gi|237716196|ref|ZP_04546677.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. D1]
gi|262407805|ref|ZP_06084353.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 2_1_22]
gi|294807624|ref|ZP_06766417.1| C-5 cytosine-specific DNA methylase [Bacteroides xylanisolvens SD
CC 1b]
gi|229443843|gb|EEO49634.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. D1]
gi|262354613|gb|EEZ03705.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 2_1_22]
gi|294445060|gb|EFG13734.1| C-5 cytosine-specific DNA methylase [Bacteroides xylanisolvens SD
CC 1b]
Length = 561
Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 15/94 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFG------- 54
DLFCG GG +E + + ++ ++ AN P+ L F
Sbjct: 8 YIDLFCGAGGTSTGVESARIDGKQCAKVIACVNHDANAIASHAANHPDALHFTEDIRTLE 67
Query: 55 ------DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+AK K Q VL A C FS+A
Sbjct: 68 LSPLIEHLAKCKAQYPGAAVVLWASLECTNFSKA 101
>gi|5732053|gb|AAD48952.1|AF149414_1 contains similarity to Pfam family PF00145 (C-5 cytosine-specific
DNA methylase); score=10.4. E=0.051, N=1 [Arabidopsis
thaliana]
gi|7267225|emb|CAB80832.1| AT4g04670 [Arabidopsis thaliana]
Length = 977
Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
+ DLF GIG L + ++ E NP+++
Sbjct: 841 VVDLFAGIGYFVLPF---LVRAKAKLVYACEWNPHAI 874
>gi|254224899|ref|ZP_04918514.1| Site-specific DNA methylase [Vibrio cholerae V51]
gi|125622587|gb|EAZ50906.1| Site-specific DNA methylase [Vibrio cholerae V51]
Length = 505
Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
+ D F G GG +E +R+V+ + +P ++ ++ N D+ +
Sbjct: 8 VVDNFAGGGGASTGME-LGLNRHVDI--AINHDPEAIDMHKMNHPETKHYCESVWDVDPV 64
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ + C+ FS+A
Sbjct: 65 EACAGRPVGLAWFSPDCKHFSKA 87
>gi|224076221|ref|XP_002304908.1| predicted protein [Populus trichocarpa]
gi|222847872|gb|EEE85419.1| predicted protein [Populus trichocarpa]
Length = 1031
Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
I DLF GIG L + ++ E NP++
Sbjct: 875 IVDLFAGIGYFTLPF---LVRAKAKLVYACEWNPHA 907
>gi|326508760|dbj|BAJ95902.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
+ DLF GIG L N + ++ E NP++
Sbjct: 632 VVDLFSGIGYFVLPF---LVKANAKLVYACEWNPHA 664
>gi|300861667|ref|ZP_07107751.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TUSoD
Ef11]
gi|300849128|gb|EFK76881.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TUSoD
Ef11]
Length = 385
Score = 39.1 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 37/133 (27%), Gaps = 54/133 (40%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----------- 49
MLK+ + F GIG + LE+ + E + E + ++ Y N
Sbjct: 1 MLKVVEAFSGIGAQKQALEKL--NIEHEIINTIEWDINAIYAYDIMHHNDNSPSKLSKHE 58
Query: 50 ----------------------------------------TLIFGDIAKIKTQDIPDH-D 68
DI ++ IPD D
Sbjct: 59 IIERLANVTLSPDGKKPFSDNGLYRIKEEKLQKLYAAIRRNNNLCDITQVSGDMIPDDTD 118
Query: 69 VLLAGFPCQPFSQ 81
+L FPCQ S
Sbjct: 119 LLTYSFPCQDLSI 131
>gi|229547357|ref|ZP_04436082.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX1322]
gi|256854885|ref|ZP_05560249.1| predicted protein [Enterococcus faecalis T8]
gi|307292237|ref|ZP_07572101.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0411]
gi|229307506|gb|EEN73493.1| possible DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis
TX1322]
gi|256710445|gb|EEU25489.1| predicted protein [Enterococcus faecalis T8]
gi|306496743|gb|EFM66296.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0411]
gi|315028686|gb|EFT40618.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX4000]
Length = 391
Score = 39.1 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 37/133 (27%), Gaps = 54/133 (40%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN----------- 49
MLK+ + F GIG + LE+ + E + E + ++ Y N
Sbjct: 7 MLKVVEAFSGIGAQKQALEKL--NIEHEIINTIEWDINAIYAYDIMHHNDNSPSKLSKHE 64
Query: 50 ----------------------------------------TLIFGDIAKIKTQDIPDH-D 68
DI ++ IPD D
Sbjct: 65 IIERLANVTLSPDGKKPFSDNGLYRIKEEKLQKLYAAIRRNNNLCDITQVSGDMIPDDTD 124
Query: 69 VLLAGFPCQPFSQ 81
+L FPCQ S
Sbjct: 125 LLTYSFPCQDLSI 137
>gi|228950081|ref|ZP_04112266.1| Type II DNA-methyltransferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228809608|gb|EEM56044.1| Type II DNA-methyltransferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 463
Score = 39.1 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 5/82 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + + G G T E+ + + NF + ++ D+ I
Sbjct: 126 ISLLSVCAGGGIGTASFVDTQY---FTSIAEIELEEDCCEAIRHNFSSFIMNCDVRDINV 182
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
P DV+ PC FS G
Sbjct: 183 V--PKVDVINCTIPCNNFSTLG 202
>gi|313113254|ref|ZP_07798867.1| hypothetical protein HMPREF9436_00712 [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310624427|gb|EFQ07769.1| hypothetical protein HMPREF9436_00712 [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 66
Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
L LF GIGGI L E E + +++P F DI +
Sbjct: 3 LTHFSLFSGIGGIDLAAEAA----GFTSVCQCEWAAFPAAVLASHWPEVSRFQDITTV 56
>gi|257419811|ref|ZP_05596805.1| site-specific DNA methylase [Enterococcus faecalis T11]
gi|257161639|gb|EEU91599.1| site-specific DNA methylase [Enterococcus faecalis T11]
Length = 380
Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 8/69 (11%)
Query: 23 NHRNVECFFSSEINPYSVKTYQANFPNTL-----IFGDIAKIKTQDI---PDHDVLLAGF 74
+++E + +V+TY+ N D+ + D D L+ GF
Sbjct: 30 EEWGFVHAWANEYDSDTVETYKLNILKDPDATSVYCQDVRTFDLHNHELLGDIDALIFGF 89
Query: 75 PCQPFSQAG 83
PC +S G
Sbjct: 90 PCNDYSLVG 98
>gi|238501564|ref|XP_002382016.1| RNA methylase family protein, putative [Aspergillus flavus
NRRL3357]
gi|220692253|gb|EED48600.1| RNA methylase family protein, putative [Aspergillus flavus
NRRL3357]
Length = 252
Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 13/84 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + D F G GG + ++ + ++ E NP ++ + N + I +
Sbjct: 89 MVLVDAFAGAGGNTIAFARSGR---WKRVYAIEKNPAVLQCAKHNAKIYGVEDKITWFEG 145
Query: 62 Q----------DIPDHDVLLAGFP 75
D+ + VL A P
Sbjct: 146 DSLQIVNNQLKDLGPYSVLFASPP 169
>gi|240280627|gb|EER44131.1| DNA methyltransferase [Ajellomyces capsulatus H143]
gi|325089115|gb|EGC42425.1| DNA methyltransferase [Ajellomyces capsulatus H88]
Length = 1234
Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 20/96 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57
L+ ++F G G L++ +E ++ E + + TY+AN N +
Sbjct: 660 LRALNIFSGGGSFDRGLQEGGA---IENKWAVEWSHVPMLTYRANHDNPEKIHLFLGSVN 716
Query: 58 KIKTQ-------------DIPDHDVLLAGFPCQPFS 80
Q + D + AG PCQ +S
Sbjct: 717 DFLLQALQGEAKASNLVAKLGDVGFISAGSPCQGYS 752
>gi|239928909|ref|ZP_04685862.1| hypothetical protein SghaA1_11860 [Streptomyces ghanaensis ATCC
14672]
gi|291437236|ref|ZP_06576626.1| gp77 [Streptomyces ghanaensis ATCC 14672]
gi|291340131|gb|EFE67087.1| gp77 [Streptomyces ghanaensis ATCC 14672]
Length = 244
Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 6/75 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLFC GG + + +I P + + + L I++
Sbjct: 16 RLLDLFCCAGGAAVGYARAGFA-----VDGCDIAPRPNYPFPYHHGDALAHLA-RLIESG 69
Query: 63 DIPDHDVLLAGFPCQ 77
+I + + A PCQ
Sbjct: 70 EIRRYAFVHASPPCQ 84
>gi|225560828|gb|EEH09109.1| DNA methyltransferase Dim-2 [Ajellomyces capsulatus G186AR]
Length = 1236
Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 20/96 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIA 57
L+ ++F G G L++ +E ++ E + + TY+AN N +
Sbjct: 660 LRALNIFSGGGSFDRGLQEGGA---IENKWAVEWSHVPMLTYRANHDNPEKIHLFLGSVN 716
Query: 58 KIKTQ-------------DIPDHDVLLAGFPCQPFS 80
Q + D + AG PCQ +S
Sbjct: 717 DFLLQALQGEAKASNLVAKLGDVGFISAGSPCQGYS 752
>gi|223939324|ref|ZP_03631204.1| DNA-cytosine methyltransferase [bacterium Ellin514]
gi|223892037|gb|EEF58518.1| DNA-cytosine methyltransferase [bacterium Ellin514]
Length = 374
Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 22/78 (28%), Gaps = 18/78 (23%)
Query: 24 HRNVECFFSSEINPYSV-----------KTYQANFPNTLIFGDIAKIKTQDI-------P 65
+ + E +P + + + DI K+ +
Sbjct: 2 KAGWKGVIAIEKDPMAFATLKHNLVDMEEHFAWPKWLPTTSHDIKKVIRKYPSELKKLAG 61
Query: 66 DHDVLLAGFPCQPFSQAG 83
++ G PCQ FS G
Sbjct: 62 KITLVAGGPPCQGFSVNG 79
>gi|308183509|ref|YP_003927636.1| DNA-cytosine methyltransferase [Helicobacter pylori PeCan4]
gi|308065694|gb|ADO07586.1| DNA-cytosine methyltransferase [Helicobacter pylori PeCan4]
Length = 238
Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 65 PDHDVLLAGFPCQPFSQAG 83
D++L GFPCQ FS AG
Sbjct: 1 MPTDIVLGGFPCQDFSFAG 19
>gi|260871192|ref|YP_003237972.1| putative DNA methyltransferase [Escherichia coli O111:H- str.
11128]
gi|257767771|dbj|BAI39264.1| probable DNA methyltransferase [Escherichia coli O111:H- str.
11128]
Length = 1013
Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 24/77 (31%), Gaps = 8/77 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS----VKTYQANFPNTLIFGDIAKI 59
+ GI + + + +EI P+ + + K+
Sbjct: 6 YGSVCSGI----EAASIAWEPLGMRPAWFAEIEPFPSAVLALRWPHVANLGDMKKLAKKV 61
Query: 60 KTQDIPDHDVLLAGFPC 76
+I DVL+ G PC
Sbjct: 62 LAGEIESPDVLVGGTPC 78
>gi|71409977|ref|XP_807306.1| proliferator-activated receptor-interacting protein (PRIP)
interacting protein (PIMT) [Trypanosoma
gi|70871278|gb|EAN85455.1| proliferator-activated receptor-interacting protein (PRIP)
interacting protein (PIMT), putative [Trypanosoma cruzi]
Length = 250
Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 11/78 (14%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62
+ DLFCG GG + L + E + +I+P +++ + N + ++
Sbjct: 64 VLDLFCGCGGDTVQLARV-----YEKVVAVDIDPDAIEAAKKNVEVYGVGDRVSFYCCDF 118
Query: 63 -----DIPDHDVLLAGFP 75
D + D L P
Sbjct: 119 RTLKLDNMEFDALHCSPP 136
>gi|322511384|gb|ADX06692.1| putative C-5 cytosine specific DNA methyltransferase [Organic Lake
phycodnavirus]
Length = 358
Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 35/106 (33%), Gaps = 37/106 (34%)
Query: 11 IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQAN------------------------ 46
+GG L + Q E +E + S+++++ N
Sbjct: 1 MGGDTLGMIQA----GCEVIAFNEYDKASIQSHKMNFPDSELICASVKEREKYKESLTGT 56
Query: 47 -------FPNTLIFGDIAKIKTQDIPDH--DVLLAGFPCQPFSQAG 83
+ +I I+ + + D++ AG PCQ FS G
Sbjct: 57 KKENHKAMKDYDDVYNIQNIQDDVLGSYKADLIFAGHPCQGFSNGG 102
>gi|312127904|ref|YP_003992778.1| sun protein [Caldicellulosiruptor hydrothermalis 108]
gi|311777923|gb|ADQ07409.1| sun protein [Caldicellulosiruptor hydrothermalis 108]
Length = 410
Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 23/83 (27%), Gaps = 10/83 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------ 56
K+ DL GG + +IN + + + N I
Sbjct: 235 KVIDLCAAPGG--KTFNCAEVIDGF--VVACDINEHKLDILRENILRLGFDNIIVAKSDA 290
Query: 57 AKIKTQDIPDHDVLLAGFPCQPF 79
D+++A PC F
Sbjct: 291 EVFNPDFAEKFDIVIADLPCTGF 313
>gi|222529034|ref|YP_002572916.1| Fmu (Sun) domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222455881|gb|ACM60143.1| Fmu (Sun) domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 406
Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 23/83 (27%), Gaps = 10/83 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------ 56
K+ DL GG + +IN + + + N I
Sbjct: 231 KVIDLCAAPGG--KTFNCAEVIDGF--VVACDINEHKLDILRENILRLGFDNIIVAKSNA 286
Query: 57 AKIKTQDIPDHDVLLAGFPCQPF 79
D+++A PC F
Sbjct: 287 EVFNPDFAEKFDIVIADLPCTGF 309
>gi|242764673|ref|XP_002340822.1| RNA methylase family protein, putative [Talaromyces stipitatus ATCC
10500]
gi|218724018|gb|EED23435.1| RNA methylase family protein, putative [Talaromyces stipitatus ATCC
10500]
Length = 242
Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59
D F G GG + ++ + ++ E +P + + N + I
Sbjct: 79 IDAFAGAGGNSIAFAKSGR---WKRVYAIEKDPAVLACAKHNAKIYGVQSKITWFEGDCF 135
Query: 60 -----KTQDIPDHDVLLAGFP 75
+D+ + V+ A P
Sbjct: 136 EILKTHLKDLGFYSVVFASPP 156
>gi|294056254|ref|YP_003549912.1| DNA-cytosine methyltransferase [Coraliomargarita akajimensis DSM
45221]
gi|293615587|gb|ADE55742.1| DNA-cytosine methyltransferase [Coraliomargarita akajimensis DSM
45221]
Length = 518
Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 8/45 (17%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49
D+F G GG+ + S E++ ++ T +
Sbjct: 9 IDIFAGPGGLAEGFSNA----GFDIRLSVEMDEHAHNTLRFRSFC 49
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
P VLL G PCQ +S G
Sbjct: 117 KEPKDWVLLGGPPCQAYSLVG 137
>gi|226088552|dbj|BAH37021.1| chromomethylase OsMET2c [Oryza sativa Japonica Group]
Length = 749
Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFP 48
L + DL+CG GG+ L V ++ + + + ++++ N P
Sbjct: 214 LSLLDLYCGCGGMSTGLCLGARGGGVNLSARWAIDDDEIACESFRNNHP 262
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 12/46 (26%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
P + + D DV+ G PCQ S
Sbjct: 356 WEPVEGLRNCKEAIRDFVIEGHRQRILPRPGDVDVVCGGPPCQGIS 401
>gi|218196311|gb|EEC78738.1| hypothetical protein OsI_18945 [Oryza sativa Indica Group]
Length = 1325
Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFP 48
L + DL+CG GG+ L V ++ + + + ++++ N P
Sbjct: 748 LSLLDLYCGCGGMSTGLCLGARGGGVNLSARWAIDDDEIACESFRNNHP 796
>gi|168034417|ref|XP_001769709.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679058|gb|EDQ65510.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 700
Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFP 48
DL+CG G + + N + ++ ++N ++ + + N P
Sbjct: 153 LDLYCGCGAMSTGICLGMNLAGINLVTKWAVDLNEFACMSLKYNHP 198
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 14/46 (30%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
P + + + + D DV+ G PCQ S
Sbjct: 286 WEPAASLDHCPERVKEFVLEGRRQKLLPLPGDCDVICGGPPCQGAS 331
>gi|222630668|gb|EEE62800.1| hypothetical protein OsJ_17603 [Oryza sativa Japonica Group]
Length = 1190
Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC--FFSSEINPYSVKTYQANFP 48
L + DL+CG GG+ L V ++ + + + ++++ N P
Sbjct: 571 LSLLDLYCGCGGMSTGLCLGARGGGVNLSARWAIDDDEIACESFRNNHP 619
>gi|297837287|ref|XP_002886525.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332366|gb|EFH62784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 732
Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 25/73 (34%), Gaps = 3/73 (4%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ DL+ G G + L + V ++ + N ++ ++ + N P I +I
Sbjct: 173 MLDLYSGCGAMSTGLCMGASLSGVNLITKWAVDNNSFACESLKLNHP-ETKCRRIFEIAE 231
Query: 62 QDIPDHDVLLAGF 74
+
Sbjct: 232 GMEKAMPKVFTSP 244
>gi|224112050|ref|XP_002316067.1| DNA methyltransferase [Populus trichocarpa]
gi|222865107|gb|EEF02238.1| DNA methyltransferase [Populus trichocarpa]
Length = 609
Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHR-NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
+ + LF GIGG + L + H V +SE N +K + + T I I+
Sbjct: 486 ITVLSLFSGIGGAEITLHRLGIHLKGVVSVETSETNRRVLKRWWYSSGQTGRLEQIEDIR 545
Query: 61 TQDIPDHDVLLAGFPCQPF 79
+ L+ F C F
Sbjct: 546 KLTSSTVERLVENFVCFDF 564
>gi|222445333|ref|ZP_03607848.1| hypothetical protein METSMIALI_00961 [Methanobrevibacter smithii
DSM 2375]
gi|261350106|ref|ZP_05975523.1| methyltransferase [Methanobrevibacter smithii DSM 2374]
gi|222434898|gb|EEE42063.1| hypothetical protein METSMIALI_00961 [Methanobrevibacter smithii
DSM 2375]
gi|288860892|gb|EFC93190.1| methyltransferase [Methanobrevibacter smithii DSM 2374]
Length = 245
Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 7/76 (9%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ D+F GIG + H N + +S EINP S + N I I +
Sbjct: 99 TVIDMFAGIGYFSI---PIGVHSNAKQVYSIEINPNSFHYLKENIKLNKINNIIPLLGDC 155
Query: 63 DI----PDHDVLLAGF 74
D ++ G+
Sbjct: 156 MDITPEYSADRIIMGY 171
>gi|148643096|ref|YP_001273609.1| methyltransferase [Methanobrevibacter smithii ATCC 35061]
gi|148552113|gb|ABQ87241.1| predicted methyltransferase [Methanobrevibacter smithii ATCC 35061]
Length = 245
Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 7/76 (9%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ D+F GIG + H N + +S EINP S + N I I +
Sbjct: 99 TVIDMFAGIGYFSI---PIGVHSNAKQVYSIEINPNSFHYLKENIKLNKINNIIPLLGDC 155
Query: 63 DI----PDHDVLLAGF 74
D ++ G+
Sbjct: 156 MDITPEYSADRIIMGY 171
>gi|295397699|ref|ZP_06807772.1| 23S rRNA (uracil-5-)-methyltransferase [Aerococcus viridans ATCC
11563]
gi|294974068|gb|EFG49822.1| 23S rRNA (uracil-5-)-methyltransferase [Aerococcus viridans ATCC
11563]
Length = 469
Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 28/79 (35%), Gaps = 6/79 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHR-NVECFFSSEINPYSVKTYQANFPNTLIFGDIA--- 57
+K+ DLFCGIG L L +E + IN N NT A
Sbjct: 320 MKVLDLFCGIGTFSLPLAAASKSLAGIEIV-ENSINSAKRNAADNNLDNTFFMASDARAG 378
Query: 58 -KIKTQDIPDHDVLLAGFP 75
++ D+LL P
Sbjct: 379 LRVLPDVWGQPDLLLLDPP 397
>gi|75859106|ref|XP_868893.1| hypothetical protein AN9511.2 [Aspergillus nidulans FGSC A4]
gi|40747596|gb|EAA66752.1| hypothetical protein AN9511.2 [Aspergillus nidulans FGSC A4]
Length = 187
Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ-- 62
D+F G GG + ++ + + ++ E +P +++ Q N + I +
Sbjct: 95 VDVFAGAGGNTIAFARSGH---WKRVYAIEKDPATLRCAQHNAEVYGVADKITWFQGDCF 151
Query: 63 --------DIPDHDVLLAGFP 75
D+ + VL A P
Sbjct: 152 DILKSQLKDLAPYSVLFASPP 172
>gi|238922584|ref|YP_002936097.1| modification methylase, putative [Eubacterium rectale ATCC 33656]
gi|238874256|gb|ACR73963.1| modification methylase, putative [Eubacterium rectale ATCC 33656]
Length = 433
Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M ++ + F GIG L + E +++ + ++ Y + A+I
Sbjct: 15 MFRVIETFSGIGSQAKALTRIGKP--FEIVNTADWDINAILAYCLIHKGKIDINKYAEIS 72
Query: 61 TQD 63
+D
Sbjct: 73 DED 75
>gi|296088422|emb|CBI37413.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 8/41 (19%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
L + DL+ G GG+ L V ++ + + +
Sbjct: 168 LALLDLYSGCGGMSTGLCLGAKLSCVNLVTKWALDFDKSAC 208
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 13/46 (28%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
P + + + D DV+ G PCQ S
Sbjct: 315 WEPIEGLSNCQEGIYDFVRNGLKSKILPRPGDVDVICGGPPCQGIS 360
>gi|225427443|ref|XP_002267685.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 1586
Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 8/41 (19%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
L + DL+ G GG+ L V ++ + + +
Sbjct: 1025 LALLDLYSGCGGMSTGLCLGAKLSCVNLVTKWALDFDKSAC 1065
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 13/46 (28%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
P + + + D DV+ G PCQ S
Sbjct: 1172 WEPIEGLSNCQEGIYDFVRNGLKSKILPRPGDVDVICGGPPCQGIS 1217
>gi|312793229|ref|YP_004026152.1| sun protein [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180369|gb|ADQ40539.1| sun protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 410
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 23/83 (27%), Gaps = 10/83 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------ 56
K+ DL GG + +IN + + + N I
Sbjct: 235 KVIDLCAAPGG--KTFNCAEVIDGF--VVACDINEHKLDVLRENILRLGFDNIIVAKSDA 290
Query: 57 AKIKTQDIPDHDVLLAGFPCQPF 79
D+++A PC F
Sbjct: 291 EVFNPDFAEKFDIVIADLPCTGF 313
>gi|312876959|ref|ZP_07736934.1| sun protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311796274|gb|EFR12628.1| sun protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 406
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 23/83 (27%), Gaps = 10/83 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------ 56
K+ DL GG + +IN + + + N I
Sbjct: 231 KVIDLCAAPGG--KTFNCAEVIDGF--VVACDINEHKLDVLRENILRLGFDNIIVAKSDA 286
Query: 57 AKIKTQDIPDHDVLLAGFPCQPF 79
D+++A PC F
Sbjct: 287 EVFNPDFAEKFDIVIADLPCTGF 309
>gi|42561466|ref|NP_975917.1| cytosine-specific DNA-methyltransferase [Mycoplasma mycoides
subsp. mycoides SC str. PG1]
gi|42492965|emb|CAE77559.1| Cytosine-specific DNA-methyltransferase [Mycoplasma mycoides
subsp. mycoides SC str. PG1]
Length = 116
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 8/61 (13%)
Query: 31 FSSEINPYSVKTYQANFPNTLIFG--------DIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ + N +++T++ N P + I IK ++++ G PCQ FS
Sbjct: 2 LAVDFNKSALETFKHNMPWSDIICGDITNESIRQEIIKRATKLKVNMIIGGPPCQGFSNK 61
Query: 83 G 83
G
Sbjct: 62 G 62
>gi|212529036|ref|XP_002144675.1| RNA methylase family protein, putative [Penicillium marneffei ATCC
18224]
gi|210074073|gb|EEA28160.1| RNA methylase family protein, putative [Penicillium marneffei ATCC
18224]
Length = 242
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI----- 59
D F G GG + ++ + ++ E NP + + N + I
Sbjct: 79 IDAFAGAGGNSIAFAKSGR---WKRVYAIEKNPAVLTCAKHNAKIYGVESKITWFEGDCF 135
Query: 60 -----KTQDIPDHDVLLAGFP 75
+D+ + V+ A P
Sbjct: 136 EILKTHLKDLGPYSVVFASPP 156
>gi|168058860|ref|XP_001781424.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667161|gb|EDQ53798.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1008
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
+ DLF GIG L + ++ E NP ++
Sbjct: 851 TVVDLFAGIGYYTLPF---LLKGGAKLVYTCEWNPNAI 885
>gi|224057130|ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa]
gi|222846392|gb|EEE83939.1| DNA methyltransferase [Populus trichocarpa]
Length = 973
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 7/38 (18%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
DL+ G G + L N + ++ ++N ++
Sbjct: 403 LDLYSGCGAMSTGLCLGANLSGLNLVTKWAVDLNKHAC 440
Score = 34.1 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 28/85 (32%), Gaps = 12/85 (14%)
Query: 3 KITDLFCG----IGGIR-LDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGD 55
KI ++ G IGG R L + ++ + + P S + +
Sbjct: 525 KILEVCHGDPKEIGGQRDLYFKVSWKNYGPDYDT-----WEPISGLSNCREAIKKFVMHG 579
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFS 80
D +V+ G PCQ S
Sbjct: 580 YKSNILPLPGDVEVICGGPPCQGIS 604
>gi|209544778|ref|YP_002277007.1| DNA-cytosine methyltransferase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532455|gb|ACI52392.1| DNA-cytosine methyltransferase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 435
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD------IPDH 67
+ + + ++ ++ + + + + + +
Sbjct: 24 FSTLFAIEAHADAFDTYRANLLDSGRNRHSWPAWLDKRAWQAQDVLVHHETELAELRGKV 83
Query: 68 DVLLAGFPCQPFSQAG 83
D++ G PCQ FS G
Sbjct: 84 DLVAGGPPCQGFSMNG 99
>gi|170739771|ref|YP_001768426.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46]
gi|168194045|gb|ACA15992.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46]
Length = 434
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 23/76 (30%), Gaps = 19/76 (25%)
Query: 27 VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI-------------------PDH 67
FS E +P + TY+ N + + +
Sbjct: 24 FSILFSVEAHPDAFATYRHNLLDARPDQHVWPSWLEKRAWRAEELFTTHRAELVGLRGKV 83
Query: 68 DVLLAGFPCQPFSQAG 83
D+L G PCQ FS G
Sbjct: 84 DLLAGGPPCQGFSTNG 99
>gi|162149538|ref|YP_001603999.1| cytosine-specifi methyltransferase DdeI [Gluconacetobacter
diazotrophicus PAl 5]
gi|161788115|emb|CAP57719.1| putative cytosine-specifi methyltransferase DdeI
[Gluconacetobacter diazotrophicus PAl 5]
Length = 435
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD------IPDH 67
+ + + ++ ++ + + + + + +
Sbjct: 24 FSTLFAIEAHADAFDTYRANLLDSGRNRHSWPAWLDKRAWQAQDVLVHHETELAELRGKV 83
Query: 68 DVLLAGFPCQPFSQAG 83
D++ G PCQ FS G
Sbjct: 84 DLVAGGPPCQGFSMNG 99
>gi|225684039|gb|EEH22323.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb03]
Length = 1336
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 29/96 (30%), Gaps = 20/96 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN------PYSVKTYQANFPNTLIFGD 55
L+ ++F G G LE+ + ++ E + + L +
Sbjct: 760 LRALNIFSGGGSFDRGLEEGGA---IRNEWAVEWELAPMLTYRANQHDPERVKLFLGSVN 816
Query: 56 IAKIKTQDIPDHD-----------VLLAGFPCQPFS 80
++ D + AG PCQ +S
Sbjct: 817 DFLLRAFQGKSEDNNLVAKLGDVEFISAGSPCQGYS 852
>gi|229586279|ref|YP_002844780.1| Site-specific DNA methylase [Rickettsia africae ESF-5]
gi|228021329|gb|ACP53037.1| Site-specific DNA methylase [Rickettsia africae ESF-5]
Length = 65
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I+ + Y+ NF + DI +I IP HD+L AGFPCQ FS +G
Sbjct: 5 IDKDVQEAYKRNFGDKPYG-DITEISETKIPKHDILCAGFPCQSFSISG 52
>gi|288917811|ref|ZP_06412172.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f]
gi|288350739|gb|EFC84955.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f]
Length = 389
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 16/95 (16%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----- 55
M + +LF + E E P V AN
Sbjct: 1 MPRSVELF----AGGGGMALGMRDAGFEHEQLIEREPRPVHVLLANAARNPWLWKAESVV 56
Query: 56 -------IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++ ++ D D++ G PCQPFS +G
Sbjct: 57 EADVLDWLEDVENLELDDIDLVAGGPPCQPFSISG 91
>gi|299144504|ref|ZP_07037583.1| RNA methyltransferase, RsmD family [Peptoniphilus sp. oral taxon
386 str. F0131]
gi|298517592|gb|EFI41332.1| RNA methyltransferase, RsmD family [Peptoniphilus sp. oral taxon
386 str. F0131]
Length = 181
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLF G G + +E F R + + + + ++ T N + I +
Sbjct: 44 NVLDLFSGSG--SIGIE--FLSRGAKFCYFVDNDKDAIDTINKNIKKAHCENNYKVILSG 99
Query: 63 DIPDHDVLLA 72
+ D L
Sbjct: 100 ALKVMDRLCG 109
>gi|302797651|ref|XP_002980586.1| hypothetical protein SELMODRAFT_153963 [Selaginella moellendorffii]
gi|300151592|gb|EFJ18237.1| hypothetical protein SELMODRAFT_153963 [Selaginella moellendorffii]
Length = 338
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
I DLF GIG L + ++ E NP++
Sbjct: 179 IVDLFAGIGYFVLPF---LVRARAKHVYACEWNPHA 211
>gi|260904526|ref|ZP_05912848.1| DNA-cytosine methyltransferase [Brevibacterium linens BL2]
Length = 319
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
++ + P DV+L G PCQ FS+ G
Sbjct: 1 MREVETPSADVILGGPPCQGFSKLG 25
>gi|296812885|ref|XP_002846780.1| WW domain-containing protein [Arthroderma otae CBS 113480]
gi|238842036|gb|EEQ31698.1| WW domain-containing protein [Arthroderma otae CBS 113480]
Length = 238
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 23/81 (28%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + + ++ E +P +++ + N + I
Sbjct: 76 IDTFAGAGGNTIAF---AKSNRWKRVYAIEKDPETLRCAKHNAELYGVGDKITWFLGDCF 132
Query: 65 P----------DHDVLLAGFP 75
+ V+ P
Sbjct: 133 EILQNQLKDLAPYSVIFGSPP 153
>gi|169600411|ref|XP_001793628.1| hypothetical protein SNOG_03039 [Phaeosphaeria nodorum SN15]
gi|160705432|gb|EAT89770.2| hypothetical protein SNOG_03039 [Phaeosphaeria nodorum SN15]
Length = 1146
Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 18/91 (19%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD-- 63
LF G G + +E+ +V+ E + ++ T +AN N
Sbjct: 532 SLFSGGGNLDRGIEE-GGAVDVQTV--VEWDAAAIHTQRANARNPTTQQFFCGSVDDHLS 588
Query: 64 -------------IPDHDVLLAGFPCQPFSQ 81
I +++LAG PC FS
Sbjct: 589 MAIAGSDDQLVPYIGCVNIILAGSPCPGFST 619
>gi|462658|sp|P34878|MTSB_LACLC RecName: Full=Modification methylase ScrFIB; Short=M.ScrFI-B;
Short=M.ScrFIB; AltName: Full=Cytosine-specific
methyltransferase ScrFIB
gi|149495|gb|AAA16838.1| methyl-5-cytosine methylase [Lactococcus lactis]
gi|2327032|gb|AAB66694.1| 5-methyl-cytosine-methyltransferase [Lactococcus lactis subsp.
cremoris]
gi|739995|prf||2004282A methyl-5-cytosine methyltransferase
Length = 360
Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 17/41 (41%)
Query: 43 YQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
FGDI I + +PD D FPCQ S AG
Sbjct: 94 MYIANKLNKNFGDIRSIDPKKLPDFDFFTYSFPCQDISVAG 134
>gi|298253558|ref|ZP_06977348.1| site-specific DNA methylase [Gardnerella vaginalis 5-1]
gi|297532325|gb|EFH71213.1| site-specific DNA methylase [Gardnerella vaginalis 5-1]
Length = 317
Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
+ DV++ G PCQ FSQ G
Sbjct: 22 VFGTYKNKIDVIIGGPPCQGFSQKG 46
>gi|159477134|ref|XP_001696666.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282891|gb|EDP08643.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1333
Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN 36
D+F G GG+ L Q+ ++ E +
Sbjct: 714 LDIFAGCGGLSEGLHQSGVSS---TLWAVEFD 742
>gi|317403621|gb|EFV84109.1| modification methylase [Achromobacter xylosoxidans C54]
Length = 670
Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 26/83 (31%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI----FGDIAKI 59
+ D+F G GG E + NP ++ +Q N P ++
Sbjct: 15 VVDIFAGGGGWSTAYEMA---TGQHVHIAINHNPTALSMHQVNHPQAKHLIADVREVCPR 71
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ + L C SQA
Sbjct: 72 QATGGAEVGWLHLSPDCTDHSQA 94
>gi|297809639|ref|XP_002872703.1| hypothetical protein ARALYDRAFT_490107 [Arabidopsis lyrata subsp.
lyrata]
gi|297318540|gb|EFH48962.1| hypothetical protein ARALYDRAFT_490107 [Arabidopsis lyrata subsp.
lyrata]
Length = 996
Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
+ DLF GIG L ++ E NP+++
Sbjct: 841 VVDLFAGIGYFVLPF---LVRAKARLVYACEWNPHAI 874
>gi|149882798|ref|YP_001294777.1| probable DNA methylase [Microbacterium phage Min1]
gi|148763429|gb|ABR10447.1| probable DNA methylase [Microbacterium phage Min1]
Length = 317
Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 24/82 (29%), Gaps = 11/82 (13%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G+G + + + + + + D
Sbjct: 8 VDHFAGVG-----WGFACHTLGIREYGA---DTAHAVIRTRSANGMRTIYRDVWSGLFDP 59
Query: 65 ---PDHDVLLAGFPCQPFSQAG 83
P H + +A PCQ FS AG
Sbjct: 60 SLVPAHRLYIASPPCQTFSMAG 81
>gi|224982996|gb|ACN73414.1| c-5 cytosine specific DNA methylase [Acinetobacter sp. NFM2]
Length = 441
Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG LE+ F + +P ++ ++ N D+ +
Sbjct: 10 IVDNFAGGGGTSTGLERAFGRP---IDIAINHDPKALAMHRVNHPLTKHYCESVWDVDPV 66
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ ++ C+ S+A
Sbjct: 67 EITGNQPVGLVWLSPDCKHHSKA 89
>gi|167725800|ref|ZP_02409036.1| putative cytosine-specific modification methylase [Burkholderia
pseudomallei DM98]
Length = 661
Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I D F G GG LE+ F + + ++ + AN P+T + DI +
Sbjct: 17 IVDNFAGGGGASTGLERAFGRP---VDVAINHDREALAMHAANHPHTAHYCESVFDIDPV 73
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ ++ C+ FS+A
Sbjct: 74 EITGNRPVGLVWLSPDCKHFSKA 96
>gi|109900394|ref|YP_663649.1| DNA-cytosine methyltransferase [Pseudoalteromonas atlantica T6c]
gi|109702675|gb|ABG42595.1| DNA-cytosine methyltransferase [Pseudoalteromonas atlantica T6c]
Length = 535
Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 33/134 (24%), Gaps = 52/134 (38%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIF------ 53
+KI DLF G GG+ + + + S E + +T
Sbjct: 5 IKIIDLFAGPGGLGEGFSAYKENASNPFKIAISIEKETSAHRTLTLRAFYRQFGDDTPEE 64
Query: 54 -----------------GDIAKIKTQ---------------DIPDHDV------------ 69
I + Q + DV
Sbjct: 65 YYQFLRGELGKNPEDQLYKIERFAKQVSAAQKEARCFTLGEHNKEIDVAIAEAIGSDECM 124
Query: 70 LLAGFPCQPFSQAG 83
L+ G PCQ +S G
Sbjct: 125 LIGGPPCQAYSLVG 138
>gi|307546796|ref|YP_003899275.1| C-5 cytosine-specific DNA methylase [Halomonas elongata DSM 2581]
gi|307218820|emb|CBV44090.1| C-5 cytosine-specific DNA methylase [Halomonas elongata DSM 2581]
Length = 682
Score = 38.8 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 7/82 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIAKIK 60
DLF G GG LE N + + ++ +QAN P + ++ +
Sbjct: 61 VDLFAGGGGASTGLEMGLNRP---VHVAINHDADAISMHQANHPGADHYLSDVYEVDPLA 117
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
A C F+QA
Sbjct: 118 ACQGRPVGHFHASPDCTHFTQA 139
>gi|302872122|ref|YP_003840758.1| sun protein [Caldicellulosiruptor obsidiansis OB47]
gi|302574981|gb|ADL42772.1| sun protein [Caldicellulosiruptor obsidiansis OB47]
Length = 423
Score = 38.8 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 23/83 (27%), Gaps = 10/83 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------ 56
K+ DL GG + +IN + + + N I
Sbjct: 248 KVIDLCAAPGG--KTFNCAEVIDGF--VVACDINDHKLDVLRENILRLGFDNIIVAKSDA 303
Query: 57 AKIKTQDIPDHDVLLAGFPCQPF 79
D+++A PC F
Sbjct: 304 EVFNPDFAGRFDIVIADLPCTGF 326
>gi|222630097|gb|EEE62229.1| hypothetical protein OsJ_17016 [Oryza sativa Japonica Group]
Length = 551
Score = 38.8 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 15/85 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ ++ GIGG + L + +C S + + + K + + NT G + +I T
Sbjct: 413 LRVLSIYSGIGGAAIALHRLGIPL--QCVVSVDQSDTNRKILRRWWSNTEQKGQLRQINT 470
Query: 62 Q-------------DIPDHDVLLAG 73
+ D+++ G
Sbjct: 471 IWKLKINVLEDLVKEFGGFDIIIGG 495
>gi|218196042|gb|EEC78469.1| hypothetical protein OsI_18342 [Oryza sativa Indica Group]
Length = 693
Score = 38.8 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 15/85 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ ++ GIGG + L + +C S + + + K + + NT G + +I T
Sbjct: 555 LRVLSIYSGIGGAAIALHRLGIPL--QCVVSVDQSDTNRKILRRWWSNTEQKGQLRQINT 612
Query: 62 Q-------------DIPDHDVLLAG 73
+ D+++ G
Sbjct: 613 IWKLKINVLEDLVKEFGGFDIIIGG 637
>gi|115461927|ref|NP_001054563.1| Os05g0133900 [Oryza sativa Japonica Group]
gi|113578114|dbj|BAF16477.1| Os05g0133900 [Oryza sativa Japonica Group]
Length = 667
Score = 38.8 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 15/85 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ ++ GIGG + L + +C S + + + K + + NT G + +I T
Sbjct: 542 LRVLSIYSGIGGAAIALHRLGIPL--QCVVSVDQSDTNRKILRRWWSNTEQKGQLRQINT 599
Query: 62 Q-------------DIPDHDVLLAG 73
+ D+++ G
Sbjct: 600 IWKLKINVLEDLVKEFGGFDIIIGG 624
>gi|50878401|gb|AAT85176.1| putative DNA methyltransferase DMT106 [Oryza sativa Japonica Group]
gi|215693344|dbj|BAG88726.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 680
Score = 38.8 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 15/85 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ ++ GIGG + L + +C S + + + K + + NT G + +I T
Sbjct: 542 LRVLSIYSGIGGAAIALHRLGIPL--QCVVSVDQSDTNRKILRRWWSNTEQKGQLRQINT 599
Query: 62 Q-------------DIPDHDVLLAG 73
+ D+++ G
Sbjct: 600 IWKLKINVLEDLVKEFGGFDIIIGG 624
>gi|317497298|ref|ZP_07955621.1| C-5 cytosine-specific DNA methylase [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895367|gb|EFV17526.1| C-5 cytosine-specific DNA methylase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 363
Score = 38.8 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 51 LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+GDI +I +P+ D+ FPCQ S AG
Sbjct: 105 NNYGDIQRINPASLPEFDLFTYSFPCQDISVAG 137
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN 36
MLK+ + F G G R+ L + SEI
Sbjct: 1 MLKVFEAFAGYGSQRMALRNVGIE--FKVVGISEIE 34
>gi|153939582|ref|YP_001391675.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum F str.
Langeland]
gi|152935478|gb|ABS40976.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum F str.
Langeland]
gi|295319706|gb|ADG00084.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum F str.
230613]
Length = 476
Score = 38.8 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG +E + +P ++ ++ N ++ +
Sbjct: 5 IIDNFAGGGGASTGIELA---TGRSVDIAINHDPAAILMHKTNHPATKHYCESVWEVDPV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ + C+ FS+A
Sbjct: 62 EAVGNNKVALAWFSPDCKHFSKA 84
>gi|312622710|ref|YP_004024323.1| sun protein [Caldicellulosiruptor kronotskyensis 2002]
gi|312203177|gb|ADQ46504.1| sun protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 431
Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 23/83 (27%), Gaps = 10/83 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------ 56
K+ DL GG + +IN + + + N I
Sbjct: 256 KVLDLCAAPGG--KTFNCAEVIDGF--VVACDINEHKLDILRENILRLGFDNIIVAKNDA 311
Query: 57 AKIKTQDIPDHDVLLAGFPCQPF 79
D+++A PC F
Sbjct: 312 EVFNPDFAEKFDIVIADLPCTGF 334
>gi|304436864|ref|ZP_07396829.1| C-5 cytosine-specific DNA methylase [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|304370179|gb|EFM23839.1| C-5 cytosine-specific DNA methylase [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 409
Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 7/86 (8%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDI 56
M I D F G GG +E + +P ++ ++AN D+
Sbjct: 1 MELIVDNFAGGGGASTGIELA---TGRSVDIAINHDPTAIAMHRANHPSSKHYCENVWDV 57
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQA 82
++ + C+ FS+A
Sbjct: 58 DPVEACAGRPVGLAWFSPDCKHFSKA 83
>gi|241889614|ref|ZP_04776912.1| modification methylase HphIA [Gemella haemolysans ATCC 10379]
gi|241863236|gb|EER67620.1| modification methylase HphIA [Gemella haemolysans ATCC 10379]
Length = 96
Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+ + DV++ G PCQ FSQ G
Sbjct: 16 NEYKNIDVIVGGPPCQGFSQKG 37
>gi|225681086|gb|EEH19370.1| trimethylguanosine synthase [Paracoccidioides brasiliensis Pb03]
Length = 1419
Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + Q+ + ++ E P ++ + N + I + +
Sbjct: 78 VDAFAGAGGNTIAFAQSGR---WKRVYAIEKEPAVLQCAKHNAKVYGVDDKITWFEGDCM 134
Query: 65 P----------DHDVLLAGFP 75
+ V+ A P
Sbjct: 135 QILKHQLSVLSPYSVIFASPP 155
>gi|145350330|ref|XP_001419563.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579795|gb|ABO97856.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 278
Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
+ DLF GIG L Q + ++ E NP S
Sbjct: 124 TVVDLFAGIGYYTL---QLLKNAGAAKVYACEWNPNSC 158
>gi|295664785|ref|XP_002792944.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb01]
gi|226278465|gb|EEH34031.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb01]
Length = 1371
Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 20/96 (20%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52
L+ ++F G G LE+ + ++ E + TY+AN +
Sbjct: 795 LRALNIFSGGGSFDRGLEEGGA---IRNEWAVEWELAPMLTYRANQHDPERVKLFLGSVN 851
Query: 53 ------FGDIAKIKTQDIPDHDV--LLAGFPCQPFS 80
F + DV + AG PCQ +S
Sbjct: 852 DFLLRAFQGNTEANDLVAKLGDVEFISAGSPCQGYS 887
>gi|308183510|ref|YP_003927637.1| hypothetical protein HPPC_06895 [Helicobacter pylori PeCan4]
gi|308065695|gb|ADO07587.1| hypothetical protein HPPC_06895 [Helicobacter pylori PeCan4]
Length = 48
Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-------VECFFSSEINPYS 39
IT LF G GG+ L FN N + ++++++ +
Sbjct: 3 FTITSLFSGCGGLDLGFCGGFNFLNRHYAKNPFKIIYANDLDKNA 47
>gi|255554887|ref|XP_002518481.1| signal transducer, putative [Ricinus communis]
gi|223542326|gb|EEF43868.1| signal transducer, putative [Ricinus communis]
Length = 1050
Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
I DLF GIG L N + ++ E NP++
Sbjct: 866 IVDLFAGIGYFVLPF---LVRANAKLVYACEWNPHA 898
>gi|195978638|ref|YP_002123882.1| adenine/cytosine DNA methyltransferase [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195975343|gb|ACG62869.1| adenine/cytosine DNA methyltransferase [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 810
Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 17/75 (22%)
Query: 25 RNVECFFSSEINP-----------------YSVKTYQANFPNTLIFGDIAKIKTQDIPDH 67
N EC ++EI Y + + I+ +I + K
Sbjct: 2 ENFECIATNEIVERRLAIQKNNQKCQFETGYISGDIKESNTKQRIYNEIKRWKNLGNDRV 61
Query: 68 DVLLAGFPCQPFSQA 82
DV++A PCQ S A
Sbjct: 62 DVVVATPPCQGMSVA 76
>gi|147801053|emb|CAN77849.1| hypothetical protein VITISV_020833 [Vitis vinifera]
Length = 631
Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
L + D++ G GG+ L V+ ++ +IN +
Sbjct: 530 LALLDIYSGCGGMSTGLCLGAKLSGVDLVTRWALDINKSAC 570
>gi|157130292|ref|XP_001661874.1| prip interacting protein. pimt [Aedes aegypti]
gi|108871934|gb|EAT36159.1| prip interacting protein. pimt [Aedes aegypti]
Length = 526
Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62
I D FCG GG + T + +I+P ++ + N + I I
Sbjct: 371 IVDAFCGCGGNSIQFAFTCQK-----VIAIDIDPKKIEMAKHNAAVYGVADRIEFITGNF 425
Query: 63 ----DIPDHDVLLAGFP 75
D DV+ P
Sbjct: 426 LQLADKLRADVIFLSPP 442
>gi|237717607|ref|ZP_04548088.1| LOW QUALITY PROTEIN: site-specific DNA-methyltransferase
[Bacteroides sp. 2_2_4]
gi|229453111|gb|EEO58902.1| LOW QUALITY PROTEIN: site-specific DNA-methyltransferase
[Bacteroides sp. 2_2_4]
Length = 315
Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 65 PDHDVLLAGFPCQPFSQAG 83
+VL GFPCQPFS AG
Sbjct: 2 GKINVLTGGFPCQPFSVAG 20
>gi|226329615|ref|ZP_03805133.1| hypothetical protein PROPEN_03524 [Proteus penneri ATCC 35198]
gi|225202801|gb|EEG85155.1| hypothetical protein PROPEN_03524 [Proteus penneri ATCC 35198]
Length = 134
Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
I D++ G PCQ FS AG
Sbjct: 39 ISGFSGGGVDLVSGGPPCQGFSMAG 63
>gi|213972167|ref|ZP_03400254.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv.
tomato T1]
gi|302063826|ref|ZP_07255367.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv.
tomato K40]
gi|302134027|ref|ZP_07260017.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|213923077|gb|EEB56685.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv.
tomato T1]
Length = 471
Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + LF G G + + ++ F I + N +++ D +
Sbjct: 134 LAVCSLFHGGGVLDRAIHAGLARSGIDTFVRIGIELEGQYLDASLRNNPMLWRDTSFAIC 193
Query: 62 QD---------IPDHDVLLAGFPCQPFSQAG 83
D P D+++AG PC S+AG
Sbjct: 194 ADVRDVQRGTGTPVCDLVVAGIPCTGASRAG 224
>gi|119193420|ref|XP_001247316.1| hypothetical protein CIMG_01087 [Coccidioides immitis RS]
Length = 240
Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 26/82 (31%), Gaps = 13/82 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D F G+GG + ++ E NP S++ + N + I +
Sbjct: 77 VIDTFAGVGGNAIAF---ARSNKWRRVYAIEKNPASLQCAKHNAKIYGVEDKITWFQGDC 133
Query: 64 IP----------DHDVLLAGFP 75
+ V+ A P
Sbjct: 134 FEILKTQLKDLAPYSVIFASPP 155
>gi|126465624|ref|YP_001040733.1| methyltransferase [Staphylothermus marinus F1]
gi|126014447|gb|ABN69825.1| methyltransferase [Staphylothermus marinus F1]
Length = 328
Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
KI DLF GIGG + H++ ++++NPY+
Sbjct: 181 KIIDLFSGIGGFPI--HIASMHKSF--ILANDLNPYA 213
>gi|328907996|gb|EGG27756.1| RNA methyltransferase, RsmD family [Propionibacterium sp. P08]
Length = 202
Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 9/77 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDIAK 58
DLF G G + LE R F+ + + ++ + N + +
Sbjct: 57 FCDLFAGSGAM--ALEAA--SRGATTVFAVDRDRFACNVMRDNSRTTRLRIQVSSQTVTA 112
Query: 59 IKTQDIPDHDVLLAGFP 75
++ D++ P
Sbjct: 113 FLAENRRVFDIVWFDPP 129
>gi|295101554|emb|CBK99099.1| Site-specific DNA methylase [Faecalibacterium prausnitzii L2-6]
Length = 471
Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF 47
+ LF GIGG L E + ++SEI + + + F
Sbjct: 413 TLGSLFDGIGGFPLVWETAYGA--GTAVWASEIEEFPIAVTKRWF 455
Score = 37.2 bits (85), Expect = 0.71, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 50 TLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ GDI KI I D + G PCQ S AG
Sbjct: 1 MIHLGDITKIHGDQIEPVDCITFGSPCQDLSMAG 34
>gi|125718611|ref|YP_001035744.1| modification methylase [Streptococcus sanguinis SK36]
gi|125498528|gb|ABN45194.1| Modification methylase, putative [Streptococcus sanguinis SK36]
Length = 408
Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 55 DIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI+++ +QD+PD D+L FPCQ S +G
Sbjct: 104 DISEVHSQDLPDADILTYSFPCQDLSVSG 132
>gi|303244608|ref|ZP_07330941.1| protein of unknown function Met10 [Methanothermococcus okinawensis
IH1]
gi|302485034|gb|EFL47965.1| protein of unknown function Met10 [Methanothermococcus okinawensis
IH1]
Length = 345
Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+ D+FCG+G + + ++ +INP +++ + N + I I
Sbjct: 208 VVDMFCGVGPFSIACKNAKK------IYAIDINPNAIELLKKNIELNRLQNKITPI 257
>gi|71001130|ref|XP_755246.1| SNF2 family helicase [Aspergillus fumigatus Af293]
gi|66852884|gb|EAL93208.1| SNF2 family helicase, putative [Aspergillus fumigatus Af293]
gi|159129330|gb|EDP54444.1| SNF2 family helicase, putative [Aspergillus fumigatus A1163]
Length = 2115
Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 19/98 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQT--------FNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L LE + FS+EI P+ + NF +F
Sbjct: 79 LRVVTMCSGTESPLLALEMVQKVLRERFGKNFEFRHLFSAEIVPFKQAYIERNFHPRFLF 138
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFS 80
D+ ++K + + D+++AGF C FS
Sbjct: 139 RDVKQLKNRFAQTAYGSLEKIPKNPDLVIAGFSCVDFS 176
>gi|169769126|ref|XP_001819033.1| RNA methylase family protein [Aspergillus oryzae RIB40]
gi|83766891|dbj|BAE57031.1| unnamed protein product [Aspergillus oryzae]
Length = 240
Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 13/84 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + D F G GG + ++ + ++ E NP ++ + N + I +
Sbjct: 77 MVLVDAFAGAGGNTIAFARSGR---WKRVYAIEKNPAVLQCAKHNAKIYGVEDKITWFEG 133
Query: 62 Q----------DIPDHDVLLAGFP 75
D+ + VL A P
Sbjct: 134 DSLQIVNNQLKDLGPYSVLFASPP 157
>gi|312134888|ref|YP_004002226.1| sun protein [Caldicellulosiruptor owensensis OL]
gi|311774939|gb|ADQ04426.1| sun protein [Caldicellulosiruptor owensensis OL]
Length = 423
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 23/83 (27%), Gaps = 10/83 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------ 56
K+ DL GG + +IN + + + N I
Sbjct: 248 KVLDLCAAPGG--KTFNCAEVIDGF--VVACDINDHKLDVLRENILRLGFDNIIVAKSDA 303
Query: 57 AKIKTQDIPDHDVLLAGFPCQPF 79
D+++A PC F
Sbjct: 304 EIFNPDFAGRFDIVIADLPCTGF 326
>gi|163716644|gb|ABY40554.1| putative site-specific DNA methylase [Burkholderia phage Bups
phi1]
Length = 334
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I D F G GG LE+ F + + ++ + AN P+T + DI +
Sbjct: 17 IVDNFAGGGGASTGLERAFGRP---VDVAINHDREALAMHAANHPHTAHYCESVFDIDPV 73
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ ++ C+ FS+A
Sbjct: 74 EITGNRPVGLVWLSPDCKHFSKA 96
>gi|150400710|ref|YP_001324476.1| protein of unknown function Met10 [Methanococcus aeolicus Nankai-3]
gi|150013413|gb|ABR55864.1| protein of unknown function Met10 [Methanococcus aeolicus Nankai-3]
Length = 355
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ D+FCG+G + + ++ +INP +V+ + N + I I
Sbjct: 220 VVDMFCGVGPFSIACKNAKK------IYAIDINPDAVELLKKNIKLNKLQHKIIPINN 271
>gi|308172453|ref|YP_003919158.1| C-5 cytosine-specific DNA methylase [Bacillus amyloliquefaciens
DSM 7]
gi|307605317|emb|CBI41688.1| C-5 cytosine-specific DNA methylase [Bacillus amyloliquefaciens
DSM 7]
Length = 458
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG +E + + +P ++ +Q N ++
Sbjct: 13 IVDNFAGGGGASTGIELA---TGLSVDIAINHDPAAIAMHQVNHPDTEHYCESVWEVDPR 69
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ + C+ FS+A
Sbjct: 70 EAAKGRPIGLAWFSPDCKHFSKA 92
>gi|313836633|gb|EFS74347.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL037PA2]
gi|314928143|gb|EFS91974.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL044PA1]
gi|314972141|gb|EFT16238.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL037PA3]
Length = 170
Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 9/77 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF-----PNTLIFGDIAK 58
DLF G G + LE R F+ + + ++ + N + +
Sbjct: 25 FCDLFAGSGAM--ALEAA--SRGATTVFAVDRDRFACNVMRDNSRTTRLRIQVSSQTVTA 80
Query: 59 IKTQDIPDHDVLLAGFP 75
++ D++ P
Sbjct: 81 FLAENRRVFDIVWFDPP 97
>gi|301348510|ref|ZP_07229251.1| DNA-cytosine methyltransferase [Acinetobacter baumannii AB056]
Length = 62
Score = 38.4 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 5/63 (7%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN-PYSVKTYQANFPNTLIFGDIAKIK 60
+K+ D F G GG L Q ++ + + + DI ++
Sbjct: 1 MKVIDFFSGCGGASEGLRQA----GLDITIGLDFDIKAAETYQANFPEALFYNVDIRELD 56
Query: 61 TQD 63
++
Sbjct: 57 EKE 59
>gi|126341517|ref|XP_001377353.1| PREDICTED: similar to putative DNA methyltransferase [Monodelphis
domestica]
Length = 384
Score = 38.4 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 28 ECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIPD--HDVLLAGFPCQPFSQAG 83
E + ++N + + Y+ NFP+T I I ++ +++L PCQPF++ G
Sbjct: 19 EVVAAVDVNTIANEVYKHNFPHTQLWAKTIEGITLKEFNQLSFNMILMSPPCQPFTRIG 77
>gi|109946968|ref|YP_664196.1| DNA-cytosine methyltransferase [Helicobacter acinonychis str.
Sheeba]
gi|109714189|emb|CAJ99197.1| DNA-cytosine methyltransferase [Helicobacter acinonychis str.
Sheeba]
Length = 377
Score = 38.4 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 68 DVLLAGFPCQPFSQAG 83
DV+ G PCQ +S AG
Sbjct: 71 DVIFGGPPCQAYSLAG 86
>gi|328910553|gb|AEB62149.1| C-5 cytosine-specific DNA methylase [Bacillus amyloliquefaciens
LL3]
Length = 458
Score = 38.0 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG +E + + +P ++ +Q N ++
Sbjct: 13 IVDNFAGGGGASTGIELA---TGLSVDIAINHDPAAIAMHQVNHPDTEHYCESVWEVDPR 69
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ + C+ FS+A
Sbjct: 70 EAAKGRPIGLAWFSPDCKHFSKA 92
>gi|302790193|ref|XP_002976864.1| hypothetical protein SELMODRAFT_105763 [Selaginella moellendorffii]
gi|300155342|gb|EFJ21974.1| hypothetical protein SELMODRAFT_105763 [Selaginella moellendorffii]
Length = 230
Score = 38.0 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
I DLF GIG L + ++ E NP++
Sbjct: 105 IVDLFAGIGYFVLPF---LVRARAKHVYACEWNPHA 137
>gi|224503828|ref|ZP_03672135.1| hypothetical protein LmonFR_15252 [Listeria monocytogenes FSL
R2-561]
gi|255030128|ref|ZP_05302079.1| hypothetical protein LmonL_15486 [Listeria monocytogenes LO28]
Length = 33
Score = 38.0 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 2 LKITDLFCGIGGIRLDLE 19
+ DLF GIGG RL +E
Sbjct: 1 MNFLDLFAGIGGFRLGME 18
>gi|258574653|ref|XP_002541508.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901774|gb|EEP76175.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 175
Score = 38.0 bits (87), Expect = 0.40, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 13/82 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----- 58
+ D F G+GG + + ++ E +P ++ + N + I
Sbjct: 77 MIDAFAGVGGNAIAF---ARSNKWKRVYAIEKDPAVLQCAKHNAKIYGVEDKITWFEGDC 133
Query: 59 -----IKTQDIPDHDVLLAGFP 75
+ +D+ + V+ A P
Sbjct: 134 FETIRLYLKDLGPYSVIFASPP 155
>gi|15828656|ref|NP_326016.1| CpG DNA methylase (cytosine-specific methyltransferase SSSI)
[Mycoplasma pulmonis UAB CTIP]
gi|14089598|emb|CAC13358.1| CPG DNA METHYLASE (CYTOSINE-SPECIFIC METHYLTRANSFERASE SSSI)
[Mycoplasma pulmonis]
Length = 82
Score = 38.0 bits (87), Expect = 0.40, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN---HRNVECFFSSEINPYSVKTYQANFPN 49
L + + F GIG R LE N + + +SE + Y+ +Y N
Sbjct: 15 LNVFETFAGIGAQRRALENVKNKNPNFEYKIVATSEWDMYANISYDLIHHN 65
>gi|255077988|ref|XP_002502574.1| TWY3 methyltransferase [Micromonas sp. RCC299]
gi|226517839|gb|ACO63832.1| TWY3 methyltransferase [Micromonas sp. RCC299]
Length = 1107
Score = 38.0 bits (87), Expect = 0.40, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY 38
+ DLF GIG L Q H V F+ E NP
Sbjct: 499 TVVDLFAGIGYYTL---QLLRHAGVAKVFACEWNPN 531
>gi|119480763|ref|XP_001260410.1| C-5 cytosine-specific DNA methylase, putative [Neosartorya fischeri
NRRL 181]
gi|119408564|gb|EAW18513.1| C-5 cytosine-specific DNA methylase, putative [Neosartorya fischeri
NRRL 181]
Length = 2130
Score = 38.0 bits (87), Expect = 0.40, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 19/98 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQT--------FNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L LE + FS+EI P+ + NF +F
Sbjct: 78 LRVVTMCSGTESPLLALEMVQKVLRESFGKNFEFRHLFSAEIVPFKQAYIERNFHPRFLF 137
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFS 80
D+ ++K + + D+++AGF C FS
Sbjct: 138 RDVKQLKDRFAQTAYGSLEKIPKNPDLVIAGFSCVDFS 175
>gi|13358453|ref|NP_078617.1| DNA methyltransferase [Lymphocystis disease virus 1]
gi|1911173|gb|AAB50571.1| DNA (cytosine-5) methyltransferase [Lymphocystis disease virus 1]
Length = 228
Score = 38.0 bits (87), Expect = 0.40, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 12/80 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+KI DLF G ++ + ++N S ++ N + + K
Sbjct: 1 MKILDLFSG--THSVNRTRMLYNKNWNII-SVDL---------INSDYNVDILNWNYKKA 48
Query: 62 QDIPDHDVLLAGFPCQPFSQ 81
DV+ A PC+ FS
Sbjct: 49 FKPKFFDVIWASPPCRYFSI 68
>gi|322825679|gb|EFZ30569.1| proliferator-activated receptor-interacting protein interacting
protein, putative [Trypanosoma cruzi]
Length = 250
Score = 38.0 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 11/78 (14%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62
+ DLFCG GG + L + E + +I+P +++ + N + ++
Sbjct: 64 VLDLFCGCGGDTVQLARV-----YEKVVAVDIDPDAIEAAKKNVEVYGVGDRVSFYCCDF 118
Query: 63 -----DIPDHDVLLAGFP 75
D + D + P
Sbjct: 119 RTLKLDNMEFDAVHCSPP 136
>gi|51596134|ref|YP_070325.1| modification methylase [Yersinia pseudotuberculosis IP 32953]
gi|51589416|emb|CAH21038.1| putative modification methylase [Yersinia pseudotuberculosis IP
32953]
Length = 581
Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I D F G GG +E + +P ++ + N P+TL + DI +
Sbjct: 5 IVDNFAGGGGASTGIEMA---TGRSVDIAINHDPNAIAMHTTNHPDTLHYCESVFDIDPV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ C+ FS+A
Sbjct: 62 AATAGRPVGLAWFSPDCRHFSKA 84
>gi|330830237|ref|YP_004393189.1| Modification methylase [Aeromonas veronii B565]
gi|328805373|gb|AEB50572.1| Modification methylase [Aeromonas veronii B565]
Length = 433
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
++ ++ VL+ G PCQ +S AG
Sbjct: 22 LENRNESQPWVLIGGPPCQAYSLAG 46
>gi|116062018|dbj|BAF34637.1| chromomethylase [Brassica rapa]
Length = 805
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSVKTYQANFP 48
+ DL+CG G + L ++ ++ + Y+V++ + N P
Sbjct: 246 TMLDLYCGCGAMSTGLCMGAQLSGLKLVTKWAVDTCEYAVQSIKYNHP 293
Score = 34.1 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 19/70 (27%), Gaps = 7/70 (10%)
Query: 13 GIRLDLEQTFNHRN--VECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVL 70
G RL L+ + + + P + + DV+
Sbjct: 371 GGRLHLKVRWENYGPSHDT-----WEPIENLSNCRKKIKEFVVHGFKTSILPLPGGVDVV 425
Query: 71 LAGFPCQPFS 80
G PCQ S
Sbjct: 426 CGGPPCQGIS 435
>gi|209884704|ref|YP_002288561.1| C-5 cytosine-specific DNA methylase [Oligotropha carboxidovorans
OM5]
gi|209872900|gb|ACI92696.1| C-5 cytosine-specific DNA methylase [Oligotropha carboxidovorans
OM5]
Length = 752
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI----FGDIAKI 59
+ D F G GG + + + + +++ ++ N P T + I
Sbjct: 16 VIDSFAGGGGTSEGIVAA---LGRDPDIAINHDKFALAMHRINHPGTEHLIEDVVTVDAI 72
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+L C+ S+A
Sbjct: 73 SMCAGRPVGMLWMSPDCKDHSKA 95
>gi|145499550|ref|XP_001435760.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402895|emb|CAK68363.1| unnamed protein product [Paramecium tetraurelia]
Length = 421
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+K+ DLFCGIG L + N +C ++++NP N + + +
Sbjct: 214 IKVLDLFCGIGPFSL---RIAKDLNAQCL-ANDLNPECYYYLLKNIIENKVQNQVTPLNM 269
>gi|225430208|ref|XP_002282454.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 1239
Score = 38.0 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK 58
++ + + GIGG+R L++ + + + +IN + YQ NF +
Sbjct: 15 RVLEFYSGIGGMRYSLKRGGVNA--KIVEAFDINNIANDVYQHNFGHRPCQTSDTH 68
>gi|167841732|ref|ZP_02468416.1| putative cytosine-specific modification methylase [Burkholderia
thailandensis MSMB43]
Length = 587
Score = 38.0 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I D F G GG LE+ F + + ++ + AN P T + D+ +
Sbjct: 17 IIDNFAGGGGASTGLERAFGRP---VDVAINHDREALAMHAANHPQTAHYCESVFDVDPV 73
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
++ C+ FS+A
Sbjct: 74 AITGNQPVGLVWLSPDCKHFSKA 96
>gi|210610944|ref|ZP_03288669.1| hypothetical protein CLONEX_00859 [Clostridium nexile DSM 1787]
gi|210152244|gb|EEA83251.1| hypothetical protein CLONEX_00859 [Clostridium nexile DSM 1787]
Length = 278
Score = 38.0 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
I + D+L G PCQ FS AG
Sbjct: 7 IFWYKKGELDLLSGGAPCQAFSYAG 31
>gi|18312788|ref|NP_559455.1| C-5 cytosine-specific DNA methylase [Pyrobaculum aerophilum str.
IM2]
gi|18160272|gb|AAL63637.1| C-5 cytosine-specific DNA methylase [Pyrobaculum aerophilum str.
IM2]
Length = 314
Score = 38.0 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 24/68 (35%), Gaps = 9/68 (13%)
Query: 20 QTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKTQD----IPDHDVLLAGF 74
+ +I+ + + +I DI I D D DV++
Sbjct: 20 MAGFK----IAVAVDIDRDAVRTYSANHRYTIIIQEDIRYIDYGDLLKYAGDVDVIIGSP 75
Query: 75 PCQPFSQA 82
PC+PF+ A
Sbjct: 76 PCEPFTAA 83
>gi|326789842|ref|YP_004307663.1| C-5 cytosine-specific DNA methylase [Clostridium lentocellum DSM
5427]
gi|326540606|gb|ADZ82465.1| C-5 cytosine-specific DNA methylase [Clostridium lentocellum DSM
5427]
Length = 506
Score = 38.0 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIAKI 59
I D F G GG +E + + ++ ++ N P+T + DI
Sbjct: 4 IVDNFAGGGGASTGIELA---TGRSPDIAINHDEAAILMHKTNHPSTKHYQESVWDIDIK 60
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
K D+ C+ FS+A
Sbjct: 61 KVTAGQQVDLAWFSPDCKHFSKA 83
>gi|255557861|ref|XP_002519960.1| protein with unknown function [Ricinus communis]
gi|223541006|gb|EEF42564.1| protein with unknown function [Ricinus communis]
Length = 734
Score = 38.0 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF--FSSEINPYSV 40
L + DLF G GG+ L V+ ++ + N +
Sbjct: 162 LALLDLFSGCGGMSTGLCLGAKVSCVDLVTRWALDSNKSAC 202
Score = 36.8 bits (84), Expect = 0.95, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 25/84 (29%), Gaps = 11/84 (13%)
Query: 3 KITDLFCG----IGGIRLDLEQTFNHRNVECFFSSE--INPYSVKTYQANFPNTLIFGDI 56
K+ DL G IG + L+ + + SE P +
Sbjct: 276 KLVDLCYGDPDNIG--KRGLKFKVHWKGYST---SEDTWEPVEGLRNCQECIRDFVRKGF 330
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFS 80
D DV+ G PCQ S
Sbjct: 331 KSKILPLPGDVDVICGGPPCQGIS 354
>gi|312959258|ref|ZP_07773776.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas fluorescens WH6]
gi|311286518|gb|EFQ65081.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas fluorescens WH6]
Length = 741
Score = 38.0 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 7/82 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIAKIK 60
DLF G GG + E + + NP ++ ++ N P+ + D+
Sbjct: 187 VDLFAGGGGATMGQEM---GTGIPVDIAINHNPDAISMHKRNHPSAEHYITDVYDVCPRL 243
Query: 61 TQDIPDHDVLLAGFPCQPFSQA 82
L A C S A
Sbjct: 244 ATRGRPVAHLHASPECTHHSLA 265
>gi|329888667|ref|ZP_08267265.1| putative DNA methylase [Brevundimonas diminuta ATCC 11568]
gi|328847223|gb|EGF96785.1| putative DNA methylase [Brevundimonas diminuta ATCC 11568]
Length = 237
Score = 38.0 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 9/80 (11%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
M++I DL+ GG + H +I P A ++ +++
Sbjct: 1 MIRIADLYSCAGGAGYGFKLAGAH-----VTGFDIKPQPRYAGDAFEQRDVLAISAEELR 55
Query: 61 TQDIPDHDVLLAGFPCQPFS 80
D + A CQ +
Sbjct: 56 E----RFDFIHASPKCQGLT 71
>gi|171687583|ref|XP_001908732.1| hypothetical protein [Podospora anserina S mat+]
gi|170943753|emb|CAP69405.1| unnamed protein product [Podospora anserina S mat+]
Length = 344
Score = 38.0 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
I DLF G GG + E S E + ++ Q N + G I I
Sbjct: 170 TIVDLFGGAGGNTIAF---ALSEKWEHVISIERDASTLACAQHNAEVYGVSGYITFIHGD 226
Query: 63 DIPDHDVL 70
+ D L
Sbjct: 227 CLDFLDRL 234
>gi|258597054|ref|XP_001347464.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|254922428|gb|AAN35377.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 1904
Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 3 KITDLFCGIGGIRLD-LEQTFNHRNVECFFSSEINPY 38
+ DLFCG+G L L+ + +F+ +INP
Sbjct: 1649 NVVDLFCGVGYFTLPLLKCIEAQNKINNYFACDINPD 1685
>gi|254191931|ref|ZP_04898431.1| DNA cytosine methyltransferase [Burkholderia pseudomallei Pasteur
52237]
gi|157987753|gb|EDO95518.1| DNA cytosine methyltransferase [Burkholderia pseudomallei Pasteur
52237]
Length = 661
Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK--TYQANFPNTLIFGDIAKIKT 61
I D F G GG LE+ F V+ + ++ ++ + D+ ++
Sbjct: 17 IVDNFAGGGGASTGLERAFGRP-VDIAINHDLEALAMHAANHPHTTHYCESVFDVDPVEI 75
Query: 62 QDIPDHDVLLAGFPCQPFSQA 82
++ C+ FS+A
Sbjct: 76 TGNRPVGLVWLSPDCKHFSKA 96
>gi|317506927|ref|ZP_07964699.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC
BAA-974]
gi|316254855|gb|EFV14153.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC
BAA-974]
Length = 399
Score = 37.6 bits (86), Expect = 0.50, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 9/66 (13%)
Query: 27 VECFFSSEINPYSVKTYQANFPNTL---------IFGDIAKIKTQDIPDHDVLLAGFPCQ 77
V + E + ++ T +AN + + D++ G PCQ
Sbjct: 24 VRHELAVERDRWACDTLRANAAAGHPLVRGLRVLCDDVRSADWSGFEDGVDLVAGGPPCQ 83
Query: 78 PFSQAG 83
PFS G
Sbjct: 84 PFSLGG 89
>gi|239622763|ref|ZP_04665794.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239514760|gb|EEQ54627.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 507
Score = 37.6 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 29/140 (20%), Gaps = 60/140 (42%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEI------------------------- 35
I DLF G GG+ + + S E+
Sbjct: 6 IIDLFAGPGGLGEGFSSLKDPAGNPIFQICMSVEMEKNAHDTLRLRSFVRKIMKSDGQLP 65
Query: 36 --------NPYSVKTYQANFPNTLIF------------------------GDIAKIKTQD 63
NP + + + +
Sbjct: 66 KSYLNYLDNPSAYNFQAMQLEYPDKWAAADEEAVQGTLVEGDDTFVNMAKDKLKARCGDN 125
Query: 64 IPDHDVLLAGFPCQPFSQAG 83
VL+ G PCQ +S G
Sbjct: 126 YNGPLVLIGGPPCQAYSLVG 145
>gi|330934993|ref|XP_003304787.1| hypothetical protein PTT_17463 [Pyrenophora teres f. teres 0-1]
gi|311318443|gb|EFQ87106.1| hypothetical protein PTT_17463 [Pyrenophora teres f. teres 0-1]
Length = 240
Score = 37.6 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 11/80 (13%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I D F G+GG + L ++ E F+ E +P ++ + N + I +
Sbjct: 75 IIDAFAGVGGNSIALARSGR---WERVFAIEKDPKTLMCAKHNAEIYGVSSKIFWLSGDC 131
Query: 64 I--------PDHDVLLAGFP 75
+ V+ A P
Sbjct: 132 FDVISRFSGQSNVVVFASPP 151
>gi|330900173|gb|EGH31592.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 471
Score = 37.6 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY--------SVKTYQANFPNTLIF 53
L + LF G G + + ++ F I + I
Sbjct: 134 LAVCSLFHGGGVLDRAIHAGLARSGIDTFVRIGIEVEDQYLDASLRNNPMLWRDTSFAIC 193
Query: 54 GDIAKIK-TQDIPDHDVLLAGFPCQPFSQAG 83
D+ ++ P+ D+++AG PC S+AG
Sbjct: 194 ADVRDVQRGTGTPECDLVVAGIPCTGASRAG 224
>gi|257486963|ref|ZP_05641004.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 271
Score = 37.6 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY--------SVKTYQANFPNTLIF 53
L + LF G G + + ++ F I + I
Sbjct: 133 LAVCSLFHGGGVLDRAIHAGLARSGIDTFVRIGIEVEDQYLDASLRNNPMLWRDTSFAIC 192
Query: 54 GDIAKIK-TQDIPDHDVLLAGFPCQPFSQAG 83
D+ ++ P+ D+++AG PC S+AG
Sbjct: 193 ADVRDVQRGTGTPECDLVVAGIPCTGASRAG 223
>gi|308807833|ref|XP_003081227.1| MET-10+related protein-like (ISS) [Ostreococcus tauri]
gi|116059689|emb|CAL55396.1| MET-10+related protein-like (ISS) [Ostreococcus tauri]
Length = 1020
Score = 37.6 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
I DLF GIG L Q + ++ E NP S
Sbjct: 476 TIVDLFAGIGYYTL---QLLKNAGAAKVYACEWNPNSC 510
>gi|66044681|ref|YP_234522.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv.
syringae B728a]
gi|63255388|gb|AAY36484.1| C-5 cytosine-specific DNA methylase [Pseudomonas syringae pv.
syringae B728a]
Length = 471
Score = 37.6 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY--------SVKTYQANFPNTLIF 53
L + LF G G + + ++ F I + I
Sbjct: 134 LAVCSLFHGGGVLDRAIHAGLARSGIDTFVRIGIEVEDQYLDASLRNNPMLWRDTSFAIC 193
Query: 54 GDIAKIK-TQDIPDHDVLLAGFPCQPFSQAG 83
D+ ++ P+ D+++AG PC S+AG
Sbjct: 194 ADVRDVQRGTGTPECDLVVAGIPCTGASRAG 224
>gi|224026277|ref|ZP_03644643.1| hypothetical protein BACCOPRO_03033 [Bacteroides coprophilus DSM
18228]
gi|224019513|gb|EEF77511.1| hypothetical protein BACCOPRO_03033 [Bacteroides coprophilus DSM
18228]
Length = 84
Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY 43
LF G GG+ + E ++ F++E+ + +TY
Sbjct: 8 VSLFTGAGGMDVGFE----RPGIKVVFANEVMKEAAQTY 42
>gi|207108548|ref|ZP_03242710.1| type II DNA modification enzyme [Helicobacter pylori
HPKX_438_CA4C1]
Length = 171
Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 57 AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+I D+PD D L++GFPCQ FS G
Sbjct: 9 MRINPNDLPDFDALISGFPCQAFSING 35
>gi|228911354|ref|ZP_04075157.1| C-5 cytosine-specific DNA methylase [Bacillus thuringiensis IBL
200]
gi|228848291|gb|EEM93142.1| C-5 cytosine-specific DNA methylase [Bacillus thuringiensis IBL
200]
Length = 418
Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D FCG GG +E + + +P ++ ++ N ++
Sbjct: 10 IVDNFCGGGGASTGIEMA---TGLSVDIAINHDPAAIAMHRINHPDTEHYCESVWEVDPR 66
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ + C S+A
Sbjct: 67 EAVKGRKVGLAWFSPDCTHHSKA 89
>gi|297834636|ref|XP_002885200.1| methyltransferase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297331040|gb|EFH61459.1| methyltransferase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 743
Score = 37.6 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNH-RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
L + LF GIGG + L++ H + V S ++ +K + T I +IK
Sbjct: 619 LTVLSLFSGIGGAEIALDRLGIHLKGVVSVESCGLSRNILKRWWQTSGQTGELVQIEEIK 678
Query: 61 TQDIPDHDVLL---AGFP---CQPFSQ 81
+ + L+ GF CQ S
Sbjct: 679 SLTTKKLETLVQRFGGFDFVICQNPST 705
>gi|297526093|ref|YP_003668117.1| protein of unknown function Met10 [Staphylothermus hellenicus DSM
12710]
gi|297255009|gb|ADI31218.1| protein of unknown function Met10 [Staphylothermus hellenicus DSM
12710]
Length = 328
Score = 37.6 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
KI DLF GIGG + H+ ++++NPY+
Sbjct: 181 KIIDLFSGIGGFPI--HIASMHKAF--ILANDLNPYA 213
>gi|219871979|ref|YP_002476354.1| moodification methylase HgaIA [Haemophilus parasuis SH0165]
gi|219692183|gb|ACL33406.1| moodification methylase HgaIA (M.HgaIA) (Cytosine-specific
methyltransferase HgaIA) (M.HgaI-1) [Haemophilus
parasuis SH0165]
Length = 358
Score = 37.6 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 16/92 (17%)
Query: 2 LKITDLFC--GIGGIRLDLEQTFNHRNVECFFSSEI-NPYSVKTYQANFPNTLIFGDI-- 56
+ LF GIG + L + N+ ++E+ + + GDI
Sbjct: 3 INAMSLFSSAGIGELDL------HKGNLNFVVANELLKKRADTYQFFYPETKMFQGDISD 56
Query: 57 -----AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + + LLA PCQ S G
Sbjct: 57 EKLKREILLSAQQNNVQFLLATPPCQGLSSVG 88
>gi|221369948|ref|YP_002521044.1| Modification methylase [Rhodobacter sphaeroides KD131]
gi|221163000|gb|ACM03971.1| Modification methylase [Rhodobacter sphaeroides KD131]
Length = 540
Score = 37.6 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 29/133 (21%), Gaps = 53/133 (39%)
Query: 4 ITDLFCGIGGIRLDLEQT--FNHRNVECFFSSEINPYSVKT------------YQANFPN 49
I DLF G GG+ H S E + +T P
Sbjct: 7 IVDLFAGPGGLGEGFASLDVGGHAPFRIGISVEKEASAHRTLTLRAFLRAYQARHGVLPQ 66
Query: 50 TLIFGDIAKIKTQDIPDHD---------------------------------------VL 70
I I D D +L
Sbjct: 67 AFIDFHAGLIPEPDWSAVDAAAWQRATAEAQCLELGTEPAAAAIDHAIGALRREFDDTIL 126
Query: 71 LAGFPCQPFSQAG 83
+ G PCQ +S G
Sbjct: 127 IGGPPCQAYSLVG 139
>gi|157827940|ref|YP_001494182.1| site-specific DNA methylase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165932629|ref|YP_001649418.1| hypothetical protein RrIowa_0090 [Rickettsia rickettsii str.
Iowa]
gi|157800421|gb|ABV75674.1| Site-specific DNA methylase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165907716|gb|ABY72012.1| hypothetical protein RrIowa_0090 [Rickettsia rickettsii str.
Iowa]
Length = 65
Score = 37.6 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I+ + Y+ NF + DI +I IP HD+L AGFPCQ FS +G
Sbjct: 5 IDKDVQEAYKRNFGDKPYG-DIMEISETKIPKHDILCAGFPCQSFSISG 52
>gi|18401465|ref|NP_566573.1| methyltransferase family protein [Arabidopsis thaliana]
gi|30684462|ref|NP_850603.1| methyltransferase family protein [Arabidopsis thaliana]
gi|23297499|gb|AAN12982.1| unknown protein [Arabidopsis thaliana]
gi|222422929|dbj|BAH19451.1| AT3G17310 [Arabidopsis thaliana]
gi|332642414|gb|AEE75935.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
[Arabidopsis thaliana]
gi|332642415|gb|AEE75936.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
[Arabidopsis thaliana]
Length = 710
Score = 37.6 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 7/87 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHR-NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
L + LF GIGG + L++ H V S ++ +K + T I +IK
Sbjct: 589 LTVLSLFSGIGGAEIALDRLGIHLKGVVSVESCGLSRNILKRWWQTSGQTGELVQIEEIK 648
Query: 61 TQDIPDHDVLL---AGFP---CQPFSQ 81
+ + L+ GF CQ S
Sbjct: 649 SLTAKRLETLMQRFGGFDFVICQNPST 675
>gi|66805897|ref|XP_636670.1| hypothetical protein DDB_G0288547 [Dictyostelium discoideum AX4]
gi|60465061|gb|EAL63166.1| hypothetical protein DDB_G0288547 [Dictyostelium discoideum AX4]
Length = 345
Score = 37.6 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 12/80 (15%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY---SVKTYQANFPNTLIFGDIAKI 59
+ DLFCG GG + T S +++P K + ++ +I +
Sbjct: 174 TLVDLFCGAGGNTIQFSFTC-----NVVVSVDLDPMKLLMAKHNSWVYGHSSENTNIEFV 228
Query: 60 KTQDIP----DHDVLLAGFP 75
+ + DV+ P
Sbjct: 229 NSDAMNLSNLKADVIFLSPP 248
>gi|328863984|gb|EGG13083.1| hypothetical protein MELLADRAFT_32431 [Melampsora larici-populina
98AG31]
Length = 218
Score = 37.6 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 13/80 (16%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY--------SVKTYQANFPNTLIFGD 55
I D FCG GG + T + + +I+P + + +
Sbjct: 42 IVDAFCGAGGNAIQFASTSDR-----VIAIDIDPNKIALAEHNATVYGVEDKIEFICADF 96
Query: 56 IAKIKTQDIPDHDVLLAGFP 75
I I+ Q+ DV+ P
Sbjct: 97 IEWIQNQEKGSVDVIFLSPP 116
>gi|240047714|ref|YP_002961102.1| Cytosine-specific methyltransferase [Mycoplasma conjunctivae
HRC/581]
gi|239985286|emb|CAT05299.1| Cytosine-specific methyltransferase [Mycoplasma conjunctivae]
Length = 419
Score = 37.6 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHR--NVECFFSSEINPYSVKTYQANFPNTLIFGD 55
+++ + F GIG + + + + E + ++ Y A N
Sbjct: 4 IRVLETFSGIGAQHKAISNLNKNNSVKFKVVGTVEWDARAIIAYSAIHHNLFKNYK 59
>gi|15292897|gb|AAK92819.1| unknown protein [Arabidopsis thaliana]
Length = 710
Score = 37.6 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 7/87 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHR-NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
L + LF GIGG + L++ H V S ++ +K + T I +IK
Sbjct: 589 LTVLSLFSGIGGAEIALDRLGIHLKGVVSVESCGLSRNILKRWWQTSGQTGELVQIEEIK 648
Query: 61 TQDIPDHDVLL---AGFP---CQPFSQ 81
+ + L+ GF CQ S
Sbjct: 649 SLTAKRLETLMQRFGGFDFVICQNPST 675
>gi|152969948|ref|YP_001335057.1| putative site-specific DNA methylase [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|150954797|gb|ABR76827.1| putative site-specific DNA methylase [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
Length = 619
Score = 37.6 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 23/83 (27%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG +E + +P +V + N I
Sbjct: 5 IVDNFAGGGGASTGIELA---IGRSVDIAINHDPNAVAMHTTNHPDTLHYCESVYSIRPK 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ C+ FS+A
Sbjct: 62 VATAGRRVGLAWFSPDCRHFSKA 84
>gi|242010423|ref|XP_002425967.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212509958|gb|EEB13229.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 232
Score = 37.6 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
+ DLF GIG L H + ++ E NP +
Sbjct: 136 VIDLFAGIGYFTLPY---IVHAKAKFVYACEWNPVA 168
>gi|152984997|ref|YP_001347885.1| modification methylase DdeI [Pseudomonas aeruginosa PA7]
gi|150960155|gb|ABR82180.1| modification methylase DdeI [Pseudomonas aeruginosa PA7]
Length = 518
Score = 37.6 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 25/103 (24%), Gaps = 26/103 (25%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK------------------TYQ 44
K DLF L + + F+ E + +
Sbjct: 75 KFADLF----AGCGGLSLGLSLAGLNGVFAVERDKMAFSTLSTNLIERKDVPITPFAWPS 130
Query: 45 ANFPNTLIFGDIAKIKTQD----IPDHDVLLAGFPCQPFSQAG 83
DI + VL G PCQ FS AG
Sbjct: 131 WLEKQAWGIDDILDQHGAELASLRGKIQVLAGGPPCQGFSFAG 173
>gi|154482791|ref|ZP_02025239.1| hypothetical protein EUBVEN_00468 [Eubacterium ventriosum ATCC
27560]
gi|149736386|gb|EDM52272.1| hypothetical protein EUBVEN_00468 [Eubacterium ventriosum ATCC
27560]
Length = 193
Score = 37.6 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 51 LIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ G + ++K +I D++ G PCQ S AG
Sbjct: 1 MHVGSVTELKGDEIQPVDIITFGSPCQDLSIAG 33
>gi|258588219|pdb|2ZZM|A Chain A, The Complex Structure Of Atrm5 And Trnaleu
Length = 336
Score = 37.2 bits (85), Expect = 0.66, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 23/56 (41%), Gaps = 6/56 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+ D+F G+G + + ++ +INP++++ N + I I
Sbjct: 199 VVDMFAGVGPFSIACKNAKK------IYAIDINPHAIELLXKNIKLNKLEHKIIPI 248
>gi|221067021|ref|ZP_03543126.1| C-5 cytosine-specific DNA methylase [Comamonas testosteroni KF-1]
gi|220712044|gb|EED67412.1| C-5 cytosine-specific DNA methylase [Comamonas testosteroni KF-1]
Length = 361
Score = 37.2 bits (85), Expect = 0.67, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 12/94 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEIN----PYSVKTYQANFPNTLIFGD 55
L I L G G + L + F++EI ++ + +T+
Sbjct: 126 LTIGSLSHGGGVLSHALHSGLRDAGIPVRLAFANEIRVELLEHAYRVNDCWDASTVPLAT 185
Query: 56 IAKIKTQDIPDHD------VLLAGFPCQPFSQAG 83
+ D D +L AG PC S AG
Sbjct: 186 PMQHLAFDSWAMDHLPKVSILEAGIPCSGASTAG 219
>gi|289192747|ref|YP_003458688.1| protein of unknown function Met10 [Methanocaldococcus sp. FS406-22]
gi|288939197|gb|ADC69952.1| protein of unknown function Met10 [Methanocaldococcus sp. FS406-22]
Length = 336
Score = 37.2 bits (85), Expect = 0.67, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+ D+F G+G + + ++ +INP++++ + N + I I
Sbjct: 199 VVDMFAGVGPFSIACKNAKK------IYAIDINPHAIELLKKNIKLNKLEHKIIPI 248
>gi|256811407|ref|YP_003128776.1| protein of unknown function Met10 [Methanocaldococcus fervens AG86]
gi|256794607|gb|ACV25276.1| protein of unknown function Met10 [Methanocaldococcus fervens AG86]
Length = 336
Score = 37.2 bits (85), Expect = 0.67, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+ D+F G+G + + ++ +INP++++ + N + I I
Sbjct: 199 VVDMFAGVGPFSIACKNAKK------IYAIDINPHAIELLKKNIKLNKLEHKIIPI 248
>gi|15669073|ref|NP_247878.1| hypothetical protein MJ_0883 [Methanocaldococcus jannaschii DSM
2661]
gi|3024916|sp|Q58293|TRM5B_METJA RecName: Full=tRNA (guanine-N(1)-)-methyltransferase Trm5b;
AltName: Full=M1G-methyltransferase; AltName: Full=tRNA
[GM37] methyltransferase
gi|258588221|pdb|2ZZN|A Chain A, The Complex Structure Of Atrm5 And Trnacys
gi|258588222|pdb|2ZZN|B Chain B, The Complex Structure Of Atrm5 And Trnacys
gi|1499713|gb|AAB98887.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 336
Score = 37.2 bits (85), Expect = 0.67, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+ D+F G+G + + ++ +INP++++ + N + I I
Sbjct: 199 VVDMFAGVGPFSIACKNAKK------IYAIDINPHAIELLKKNIKLNKLEHKIIPI 248
>gi|127454|sp|P25283|MTG2_HAEGA RecName: Full=Modification methylase HgaIB; Short=M.HgaIB;
AltName: Full=Cytosine-specific methyltransferase
HgaIB; AltName: Full=M.HgaI-2
gi|216712|dbj|BAA14378.1| HgaI methylase [Avibacterium paragallinarum]
gi|435624|dbj|BAA04207.1| HgaI methylase 2 [Avibacterium paragallinarum]
gi|1090539|prf||2019268B HgaI restriction methylase:ISOTYPE=2
Length = 358
Score = 37.2 bits (85), Expect = 0.68, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 16/92 (17%)
Query: 2 LKITDLFC--GIGGIRLDLEQTFNHRNVECFFSSEI-NPYSVKTYQANFPNTLIFGDI-- 56
+ LF GIG + L + N+ ++E+ + + GDI
Sbjct: 3 INAMSLFSSAGIGELDL------HKGNLNFVVANELLKKRADTYQFFYPETKMFQGDISD 56
Query: 57 -----AKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + + LLA PCQ S G
Sbjct: 57 EKLKREILLSAQQNNVKFLLATPPCQGLSSVG 88
>gi|308803765|ref|XP_003079195.1| possible site-specific DNA-methyltransferase (ISS) [Ostreococcus
tauri]
gi|116057650|emb|CAL53853.1| possible site-specific DNA-methyltransferase (ISS) [Ostreococcus
tauri]
Length = 840
Score = 37.2 bits (85), Expect = 0.68, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ LF L+ +E +P+ + A FP + D+A++
Sbjct: 15 LRVASLFS----GIGGLDLGLLQAGHRISLMAEKDPHCKQVLAARFPGVALLNDVAEVLP 70
Query: 62 QDIPDHDVLLAGFPCQPFS 80
+ D D +LAGFPC S
Sbjct: 71 SMLTDIDCILAGFPCNDCS 89
>gi|294629551|ref|ZP_06708111.1| modification methylase NaeI [Streptomyces sp. e14]
gi|292832884|gb|EFF91233.1| modification methylase NaeI [Streptomyces sp. e14]
Length = 328
Score = 37.2 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 24/74 (32%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ D+ G GG+ L LEQ + + + ++
Sbjct: 1 MTFVDVCSGAGGLALGLEQAGFEPRLLLDDDDDAVATLRANRPHWNVLHTDLLEFDPVEH 60
Query: 62 QDIPDHDVLLAGFP 75
D D D+L AG P
Sbjct: 61 PDTYDVDLLSAGLP 74
>gi|300024520|ref|YP_003757131.1| C-5 cytosine-specific DNA methylase [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526341|gb|ADJ24810.1| C-5 cytosine-specific DNA methylase [Hyphomicrobium denitrificans
ATCC 51888]
Length = 548
Score = 37.2 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 11/85 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I D F G GG L +E + + IN ++ + + + D
Sbjct: 6 IIDNFAGGGGASLGVEMAC-WKGPDIA----INHDAIALGLHATNHPHTEHHVEDVWAVD 60
Query: 64 I------PDHDVLLAGFPCQPFSQA 82
+ C+ FS+A
Sbjct: 61 PRAVTKGRPVSLAWFSPDCKHFSKA 85
>gi|326775658|ref|ZP_08234923.1| C-5 cytosine-specific DNA methylase [Streptomyces cf. griseus
XylebKG-1]
gi|326655991|gb|EGE40837.1| C-5 cytosine-specific DNA methylase [Streptomyces cf. griseus
XylebKG-1]
Length = 470
Score = 37.2 bits (85), Expect = 0.71, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 17/77 (22%), Gaps = 3/77 (3%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIP 65
D F G GG Q + + DI+++ +
Sbjct: 15 DGFAGAGGSSEGARQAGVTVRT---ALNHWRLAVDVHQANHPDTAHDCADISQVDPRRYA 71
Query: 66 DHDVLLAGFPCQPFSQA 82
C S A
Sbjct: 72 TTTFAWFSPSCTNHSIA 88
>gi|291551321|emb|CBL27583.1| DNA-methyltransferase (dcm) [Ruminococcus torques L2-14]
Length = 595
Score = 37.2 bits (85), Expect = 0.71, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Query: 39 SVKTYQANFPNTLIFGDIAKIKTQDI-PDHDVLLAGFPCQPFSQAG 83
+ N + ++A + + D+ + G PCQ FS G
Sbjct: 259 ASYMANYNIKDEQFHWNVAFLNGKQYAGQVDLFVGGSPCQSFSLVG 304
>gi|324111159|gb|EGC05144.1| DNA adenine methylase [Escherichia fergusonii B253]
Length = 1095
Score = 37.2 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 8/77 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----I 59
+ GI + + + +E P+ +P+ GD+ K +
Sbjct: 6 YGSVCSGI----EAASIAWEPLGMRPAWFAETEPFPSAVLAHRWPHVANLGDMTKLAIKV 61
Query: 60 KTQDIPDHDVLLAGFPC 76
+I DVL+ G PC
Sbjct: 62 LAGEIESPDVLVGGTPC 78
>gi|284050005|ref|ZP_06380215.1| DNA (cytosine-5-)-methyltransferase [Arthrospira platensis str.
Paraca]
Length = 321
Score = 37.2 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 66 DHDVLLAGFPCQPFSQAG 83
+++ G PCQ FS G
Sbjct: 5 HINLICGGPPCQGFSTIG 22
>gi|317048385|ref|YP_004116033.1| C-5 cytosine-specific DNA methylase [Pantoea sp. At-9b]
gi|316950002|gb|ADU69477.1| C-5 cytosine-specific DNA methylase [Pantoea sp. At-9b]
Length = 584
Score = 37.2 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I D F G GG +E + +P ++ + N P+TL + DI +
Sbjct: 5 IVDNFAGGGGASTGIEMA---TGRSVDIAINHDPNAIAMHTTNHPDTLHYCESVFDIDPL 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ C+ FS+A
Sbjct: 62 AATAGAPVGLAWFSPDCRHFSKA 84
>gi|242211531|ref|XP_002471603.1| predicted protein [Postia placenta Mad-698-R]
gi|220729279|gb|EED83156.1| predicted protein [Postia placenta Mad-698-R]
Length = 2531
Score = 37.2 bits (85), Expect = 0.76, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 36/99 (36%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDLE--------QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L LE + E FS EI P+ + NF L+F
Sbjct: 136 LRVATMCSGTESPLLALELIRRSIAGHHGVNMEFEHVFSCEIEPFKQAYIERNFKPPLLF 195
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFSQ 81
D+ ++ D D+L+AG C +S
Sbjct: 196 RDVCELGDSHATTAYGSLAPVPGDVDILIAGTSCVDYSN 234
>gi|299753284|ref|XP_001833175.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130]
gi|298410229|gb|EAU88864.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130]
Length = 1253
Score = 37.2 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ D +L G PCQ FS+A
Sbjct: 824 MPSRQENIDFILGGPPCQGFSRA 846
>gi|302144138|emb|CBI23243.3| unnamed protein product [Vitis vinifera]
Length = 1013
Score = 37.2 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
I DLF GIG L + ++ E NP++
Sbjct: 855 IVDLFAGIGYFVLPF---LVSAKAKLVYACEWNPHA 887
>gi|294055588|ref|YP_003549246.1| ribosomal L11 methyltransferase [Coraliomargarita akajimensis DSM
45221]
gi|293614921|gb|ADE55076.1| ribosomal L11 methyltransferase [Coraliomargarita akajimensis DSM
45221]
Length = 299
Score = 37.2 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 19/60 (31%), Gaps = 3/60 (5%)
Query: 5 TDLF-CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
DLF G G L L + ++ + +P +++ N + D
Sbjct: 155 IDLFDAGCGSGILALSAAV--LGFKNLYAFDFDPEAIRVCHENVDYNPQIPAVVDFAVAD 212
>gi|225444519|ref|XP_002268884.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 1018
Score = 37.2 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
I DLF GIG L + ++ E NP++
Sbjct: 860 IVDLFAGIGYFVLPF---LVSAKAKLVYACEWNPHA 892
>gi|38233728|ref|NP_939495.1| putative DNA methylase [Corynebacterium diphtheriae NCTC 13129]
gi|38199989|emb|CAE49658.1| Putative DNA methylase [Corynebacterium diphtheriae]
Length = 192
Score = 37.2 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 27/80 (33%), Gaps = 11/80 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------ 56
++ DLF G G L LE R E E NP +V + N
Sbjct: 46 RVLDLFAGSG--ALGLEAA--SRGAESVVLVENNPKAVAVIRHNIAVVGHPHVDVVEMKA 101
Query: 57 -AKIKTQDIPDHDVLLAGFP 75
+ + D++LA P
Sbjct: 102 STYVASAPKNHFDMVLADPP 121
>gi|327348877|gb|EGE77734.1| SNF2 family helicase [Ajellomyces dermatitidis ATCC 18188]
Length = 2158
Score = 37.2 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQT--------FNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L LE ++ FS+EI+P+ Q NF +IF
Sbjct: 138 LRVATMCSGTEAPLLALEMAIASFKKIFGKTFSMHHLFSAEIDPFKQSYIQRNFSPDIIF 197
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFSQ 81
D+ ++ + + D+L+ GF C FS
Sbjct: 198 RDVNELIADEATTAFGSLRKVPSNLDLLVVGFSCVDFSN 236
>gi|239610686|gb|EEQ87673.1| SNF2 family helicase [Ajellomyces dermatitidis ER-3]
Length = 1945
Score = 37.2 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQT--------FNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L LE ++ FS+EI+P+ Q NF +IF
Sbjct: 138 LRVATMCSGTEAPLLALEMAIASFKKIFGKTFSMHHLFSAEIDPFKQSYIQRNFSPDIIF 197
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFSQ 81
D+ ++ + + D+L+ GF C FS
Sbjct: 198 RDVNELIADEATTAFGSLRKVPSNLDLLVVGFSCVDFSN 236
>gi|159474758|ref|XP_001695492.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158275975|gb|EDP01750.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1663
Score = 37.2 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 32/124 (25%), Gaps = 49/124 (39%)
Query: 6 DLFCGIGGIRLDLEQTF--------------------NHRNV------------------ 27
D+F G GG+ L L Q+ NH V
Sbjct: 1094 DIFAGAGGLSLGLHQSGVADTRYAVEFDTAAAAAFRANHPGVAVHRLDCSVMLTAAMVQA 1153
Query: 28 ----ECFFSSEINPYS-------VKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPC 76
C + E+ + + Q G D+L+ G PC
Sbjct: 1154 GARDNCVAAPEVMAEAEALLQRQQQQQQGQQQGQQEEGQPPPEALPGPGAVDLLVGGPPC 1213
Query: 77 QPFS 80
Q FS
Sbjct: 1214 QGFS 1217
>gi|123442605|ref|YP_001006582.1| putative cytosine-specific modification methylase [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122089566|emb|CAL12415.1| putative cytosine-specific modification methylase [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 581
Score = 37.2 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I D F G GG +E + +P ++ + N P+TL + DI +
Sbjct: 5 IVDNFAGGGGASTGIELA---TGRSVDIAINHDPNAIAMHTTNHPDTLHYCESVFDIDPV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ C+ FS+A
Sbjct: 62 AATAGRPVGLAWFSPDCRHFSKA 84
>gi|71409126|ref|XP_806926.1| proliferator-activated receptor-interacting protein (PRIP)
interacting protein (PIMT) [Trypanosoma
gi|70870807|gb|EAN85075.1| proliferator-activated receptor-interacting protein (PRIP)
interacting protein (PIMT), putative [Trypanosoma cruzi]
Length = 200
Score = 37.2 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 11/78 (14%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62
+ DLFCG GG + L + E + +I+P +++ + N + ++
Sbjct: 64 VLDLFCGCGGDTVQLARV-----YEKVVAVDIDPDAIEAAKKNVEVYGVGDRVSFYCCDF 118
Query: 63 -----DIPDHDVLLAGFP 75
D + D L P
Sbjct: 119 RTLKLDNMEFDALHCSPP 136
>gi|325495666|gb|EGC93530.1| putative DNA methyltransferase [Escherichia fergusonii ECD227]
Length = 1013
Score = 37.2 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 8/77 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----I 59
+ GI + + + +E P+ +P+ GD+ K +
Sbjct: 6 YGSVCSGI----EAASIAWEPLGMRPAWFAETEPFPSAVLAHRWPHVANLGDMTKLAIKV 61
Query: 60 KTQDIPDHDVLLAGFPC 76
+I DVL+ G PC
Sbjct: 62 LAGEIESPDVLVGGTPC 78
>gi|254490180|ref|ZP_05103371.1| methyltransferase, HemK family [Methylophaga thiooxidans DMS010]
gi|224464666|gb|EEF80924.1| methyltransferase, HemK family [Methylophaga thiooxydans DMS010]
Length = 308
Score = 37.2 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 9/78 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I DL G G I + L F + + +I+ ++ N + + I++
Sbjct: 137 ILDLCTGSGCIAIALAMAFENA---HVDAVDISHDALAVADININKHQLNDQVRSIQSDC 193
Query: 64 IP------DHDVLLAGFP 75
+D++++ P
Sbjct: 194 WQSLEPANQYDLIISNPP 211
>gi|149203399|ref|ZP_01880369.1| hypothetical protein RTM1035_02240 [Roseovarius sp. TM1035]
gi|149143232|gb|EDM31271.1| hypothetical protein RTM1035_02240 [Roseovarius sp. TM1035]
Length = 341
Score = 36.8 bits (84), Expect = 0.85, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 17/47 (36%)
Query: 35 INPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
I YSV I ++ D+L+AG PCQ S
Sbjct: 21 IVDYSVNQMGDTAAFDYPPEIIQHDLATEVGKTDLLIAGPPCQGHSN 67
>gi|169618070|ref|XP_001802449.1| hypothetical protein SNOG_12223 [Phaeosphaeria nodorum SN15]
gi|111059515|gb|EAT80635.1| hypothetical protein SNOG_12223 [Phaeosphaeria nodorum SN15]
Length = 242
Score = 36.8 bits (84), Expect = 0.86, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 11/80 (13%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I D F G+GG + L ++ E F+ E + ++K + N + I +
Sbjct: 76 IVDAFAGVGGNAIALARSGR---WERVFAIEKDEKTMKCAKHNAEVYGVASKIFWLTGDC 132
Query: 64 IPDHD--------VLLAGFP 75
V+ A P
Sbjct: 133 FEAIQRFKGSNEVVIFASPP 152
>gi|229008070|ref|ZP_04165613.1| Phage-related DNA methylase [Bacillus mycoides Rock1-4]
gi|228753185|gb|EEM02680.1| Phage-related DNA methylase [Bacillus mycoides Rock1-4]
Length = 184
Score = 36.8 bits (84), Expect = 0.86, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ + +++++IP DV GFPCQ S A
Sbjct: 1 MAIPLNDVRSEEIPKADVWCFGFPCQDISIA 31
>gi|261403494|ref|YP_003247718.1| protein of unknown function Met10 [Methanocaldococcus vulcanius M7]
gi|261370487|gb|ACX73236.1| protein of unknown function Met10 [Methanocaldococcus vulcanius M7]
Length = 336
Score = 36.8 bits (84), Expect = 0.87, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 23/56 (41%), Gaps = 6/56 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+ D+F G+G + ++ +INP++++ + N + I I
Sbjct: 199 VVDMFAGVGPFSIACRNAKK------IYAIDINPHAIELLKKNIKLNKLEHKIIPI 248
>gi|145348417|ref|XP_001418645.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578875|gb|ABO96938.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 398
Score = 36.8 bits (84), Expect = 0.87, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 16/94 (17%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK-- 60
++ +L+ GIG RL LE ++ + + + + Y+ANF + ++ +
Sbjct: 42 RLVELYSGIGATRLALEPL---VTLKSAIAVDNSDAANAVYEANFADAPRRVNVEHLDLN 98
Query: 61 ----------TQDIPDHD-VLLAGFPCQPFSQAG 83
+ +D VL PCQP+++ G
Sbjct: 99 ALFASGNGDEGRQGRRNDYVLTVSPPCQPYTRRG 132
>gi|261363795|ref|ZP_05976678.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
mucosa ATCC 25996]
gi|288568375|gb|EFC89935.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
mucosa ATCC 25996]
Length = 530
Score = 36.8 bits (84), Expect = 0.88, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIAKI 59
I DLF G GG +EQ + + + ++ + AN P T F D+
Sbjct: 16 ICDLFAGGGGASCGIEQA---TGLYVDIAVNHDAQAISMHTANHPQTRHFQTDVFDVDPA 72
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ +L C SQA
Sbjct: 73 QACGGRPVGLLHLSPDCTHHSQA 95
>gi|153835199|ref|ZP_01987866.1| site-specific DNA methylase [Vibrio harveyi HY01]
gi|148868309|gb|EDL67437.1| site-specific DNA methylase [Vibrio harveyi HY01]
Length = 475
Score = 36.8 bits (84), Expect = 0.89, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
+ D F G GG + +R+V+ + +P ++ ++ N D+ +
Sbjct: 10 VVDNFAGGGGASTGIS-LGLNRHVDI--AINHDPEAIDMHKVNHPETEHYCESVWDVDPV 66
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ + C+ FS+A
Sbjct: 67 EACKGRPVGLAWFSPDCKHFSKA 89
>gi|289422999|ref|ZP_06424819.1| hypothetical protein HMPREF0631_0417 [Peptostreptococcus
anaerobius 653-L]
gi|289156573|gb|EFD05218.1| hypothetical protein HMPREF0631_0417 [Peptostreptococcus
anaerobius 653-L]
Length = 39
Score = 36.8 bits (84), Expect = 0.89, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 10/29 (34%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECF 30
+ DLF G GG+ N +
Sbjct: 9 FTVIDLFSGAGGLSKGFLDAGNINIFKKI 37
>gi|16081974|ref|NP_394384.1| hypothetical protein Ta0926 [Thermoplasma acidophilum DSM 1728]
gi|10640203|emb|CAC12055.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 329
Score = 36.8 bits (84), Expect = 0.89, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 8/76 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT- 61
+ D+F GIG L + + N F+ +INP ++ + N + + I
Sbjct: 182 TVLDMFSGIGYFALPVAKYGNPMR---IFACDINPDAIHYLKENAVINGVENIVVPILGD 238
Query: 62 ----QDIPDHDVLLAG 73
D ++ G
Sbjct: 239 SRLSCPKGPFDSIIMG 254
>gi|186685136|ref|YP_001868332.1| hypothetical protein Npun_F5051 [Nostoc punctiforme PCC 73102]
gi|186467588|gb|ACC83389.1| hypothetical protein Npun_F5051 [Nostoc punctiforme PCC 73102]
Length = 174
Score = 36.8 bits (84), Expect = 0.90, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
LF G G+ L +E+ EI+ + KT N P+ + +
Sbjct: 9 IALFAGAFGLDLGIEEA----GFYTVSVVEIDADATKTIILNRPHNMDKDQVVYW 59
>gi|196009009|ref|XP_002114370.1| hypothetical protein TRIADDRAFT_58107 [Trichoplax adhaerens]
gi|190583389|gb|EDV23460.1| hypothetical protein TRIADDRAFT_58107 [Trichoplax adhaerens]
Length = 725
Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I D FCG+GG + + + + +I+P +K + N + I I
Sbjct: 565 IIDAFCGVGGNCIQF-----AKTCDHVIAIDIDPNKIKCARHNAKIYNVEHKIEFIVGDF 619
Query: 64 IP-----DHDVLLAGFP 75
+ DV+ P
Sbjct: 620 LQLAPSLKADVVFLSPP 636
>gi|226292283|gb|EEH47703.1| DNA repair protein rad8 [Paracoccidioides brasiliensis Pb18]
Length = 2038
Score = 36.8 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQT--------FNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L LE N+ FS+EI+P+ Q NF +IF
Sbjct: 119 LRVATMCSGTEAPLLALEMVIDSFKRIFGKTLNIHHLFSAEIDPFKQSYIQRNFSPDIIF 178
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFSQ 81
D+ ++ D D D+L+ GF C FS
Sbjct: 179 RDVNELIADDATTAFGSLRKVPADLDLLIVGFSCVDFSN 217
>gi|295673276|ref|XP_002797184.1| DNA repair protein rad8 [Paracoccidioides brasiliensis Pb01]
gi|226282556|gb|EEH38122.1| DNA repair protein rad8 [Paracoccidioides brasiliensis Pb01]
Length = 2095
Score = 36.8 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQT--------FNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L LE N+ FS+EI+P+ Q NF +IF
Sbjct: 118 LRVATMCSGTEAPLLALEMVIDSFKRIFGKTLNIHHLFSAEIDPFKQSYIQRNFSPDIIF 177
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFSQ 81
D+ ++ D D D+L+ GF C FS
Sbjct: 178 RDVNELIADDATTAFGSLRKVPADLDLLIVGFSCVDFSN 216
>gi|221125682|ref|XP_002166528.1| PREDICTED: similar to tRNA methyltransferase 12 homolog [Hydra
magnipapillata]
Length = 350
Score = 36.8 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
+ DLF GIG L ++ E NP ++
Sbjct: 164 VVDLFAGIGYFTLPY---LVKARAHTVYACEWNPNAI 197
>gi|325274252|ref|ZP_08140366.1| C-5 cytosine-specific DNA methylase [Pseudomonas sp. TJI-51]
gi|324100614|gb|EGB98346.1| C-5 cytosine-specific DNA methylase [Pseudomonas sp. TJI-51]
Length = 691
Score = 36.8 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 25/110 (22%), Gaps = 33/110 (30%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-----VECFFSSEIN-------------------- 36
++ LFCG+GG + C ++N
Sbjct: 14 IRHFHLFCGLGGGAKGFNKANPRVGNLQGKFRCIGGIDVNAAAIRDFERLSGSRGTVLDL 73
Query: 37 ------PYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
DI + P ++ PC+ FS
Sbjct: 74 FDRDQFKDFHGKEPPREWREATAADIRHAAGGEYPH--IVFLSAPCKGFS 121
>gi|326789362|ref|YP_004307183.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427]
gi|326540126|gb|ADZ81985.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427]
Length = 415
Score = 36.8 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP 48
M + + F GIG L + +++ + ++ Y
Sbjct: 1 MFNVVETFSGIGSQAKALRNIGFNA--NIVATADWDINAIIAYDLIHH 46
>gi|153867953|ref|ZP_01998119.1| hypothetical protein BGS_0003 [Beggiatoa sp. SS]
gi|152144728|gb|EDN71882.1| hypothetical protein BGS_0003 [Beggiatoa sp. SS]
Length = 52
Score = 36.8 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 1 MLKITDLFCGIGGIRLDLE 19
++KI DLF GIGG+ L +
Sbjct: 3 IMKIIDLFAGIGGLSLGFQ 21
>gi|284054848|ref|ZP_06385058.1| DNA-cytosine methyltransferase [Arthrospira platensis str.
Paraca]
Length = 220
Score = 36.8 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 69 VLLAGFPCQPFSQAG 83
+++ G PCQPFS G
Sbjct: 1 MIIGGPPCQPFSVGG 15
>gi|241997518|ref|XP_002433408.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
gi|215490831|gb|EEC00472.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
Length = 414
Score = 36.8 bits (84), Expect = 1.00, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 21/98 (21%)
Query: 2 LKITD--LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
++I +F GI LE + ++ E + + + NFP +F
Sbjct: 1 MRIVSPFVFASSTGISCGLEAVGVS---DTLWAIESLEVAARAFSLNFPKATVFVQDCNS 57
Query: 60 KTQD----------------IPDHDVLLAGFPCQPFSQ 81
++ + D L G PCQ +S
Sbjct: 58 FLKEVLEGQETNAKGQRFPKKGEVDFLCGGPPCQGYSL 95
>gi|158289899|ref|XP_001689406.1| AGAP010425-PA [Anopheles gambiae str. PEST]
gi|157018380|gb|EDO64279.1| AGAP010425-PA [Anopheles gambiae str. PEST]
Length = 468
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62
I D FCG GG + + + +I+P ++ + N + I I
Sbjct: 313 IIDAFCGCGGNTIQFAFSCQK-----VIAIDIDPRKIEMAKHNAAVYGVADRIEFIVGDF 367
Query: 63 ----DIPDHDVLLAGFP 75
D DV+ P
Sbjct: 368 MQLVDRLQADVVFLSPP 384
>gi|108562476|ref|YP_626792.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori
HPAG1]
gi|217032847|ref|ZP_03438326.1| hypothetical protein HPB128_165g6 [Helicobacter pylori B128]
gi|298737005|ref|YP_003729535.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori B8]
gi|107836249|gb|ABF84118.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori
HPAG1]
gi|216945430|gb|EEC24094.1| hypothetical protein HPB128_165g6 [Helicobacter pylori B128]
gi|298356199|emb|CBI67071.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori B8]
Length = 47
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 12/34 (35%), Gaps = 4/34 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI 35
L LF G G L EC ++EI
Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEI 36
>gi|307110413|gb|EFN58649.1| hypothetical protein CHLNCDRAFT_50474 [Chlorella variabilis]
Length = 1332
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 17/52 (32%), Gaps = 4/52 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55
+ D+F G G + L ++ + F E + + Y N
Sbjct: 557 MVDVFGGAGCVSLGFKKA----GFQWVFGVEQDKDAFTAYSRNLYEDCYREQ 604
>gi|189194583|ref|XP_001933630.1| trimethylguanosine synthase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979194|gb|EDU45820.1| trimethylguanosine synthase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 240
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 11/80 (13%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I D F G+GG + L ++ E F+ E +P ++ + N + I +
Sbjct: 75 IVDAFAGVGGNAIALARSGR---WERVFAIEKDPKTLMCAKHNAEIYGVSSKIFWLPGDC 131
Query: 64 I--------PDHDVLLAGFP 75
+ V+ A P
Sbjct: 132 FDVISRFSGQSNVVVFASPP 151
>gi|256393200|ref|YP_003114764.1| C-5 cytosine-specific DNA methylase [Catenulispora acidiphila DSM
44928]
gi|256359426|gb|ACU72923.1| C-5 cytosine-specific DNA methylase [Catenulispora acidiphila DSM
44928]
Length = 438
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 26/79 (32%), Gaps = 5/79 (6%)
Query: 7 LFCGIGGIRLDLEQTFNHR--NVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
L G GG L L + I S+ A DIA + D+
Sbjct: 34 LLAGGGGDTLGLWEAGFLPLYGGNHEAVC-IE--SLIANWAGLGTEHELADIAHLAMSDL 90
Query: 65 PDHDVLLAGFPCQPFSQAG 83
P DVL A C S AG
Sbjct: 91 PSSDVLWASVICTEVSPAG 109
>gi|319777547|ref|YP_004137198.1| cytosine-specific methyltransferase [Mycoplasma fermentans M64]
gi|318038622|gb|ADV34821.1| Cytosine-specific methyltransferase [Mycoplasma fermentans M64]
Length = 416
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTF---NHRNVECFFSSEINPYSVKTYQANFPN 49
++I + F GIG + N E + + + + Y A N
Sbjct: 4 IRIFETFSGIGAQHKAITWLNKKQKEVNFEIVATCDWDIQATIAYAAIHHN 54
>gi|120537007|ref|YP_957065.1| C-5 cytosine-specific DNA methylase [Marinobacter aquaeolei VT8]
gi|120326841|gb|ABM21150.1| C-5 cytosine-specific DNA methylase [Marinobacter aquaeolei VT8]
Length = 467
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 35/90 (38%), Gaps = 8/90 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVE--CFFSSEIN------PYSVKTYQANFPNTLIF 53
L + ++ G G + L + ++ ++EI+ + + L+
Sbjct: 120 LNVVSMYHGAGVMSRSLHDGWRSAGIKTRTLLAAEIDGRYLDASLKANADLFDSSSVLVN 179
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ ++ +P +++ G PC S+AG
Sbjct: 180 APVQDMEFDHVPSANLMEIGLPCSGQSKAG 209
>gi|195472313|ref|XP_002088445.1| GE18570 [Drosophila yakuba]
gi|194174546|gb|EDW88157.1| GE18570 [Drosophila yakuba]
Length = 331
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 5/73 (6%)
Query: 14 IRLDLEQTFNHRNVECFFSSEINPYS-VKTYQANFPNTLIFGDIAKIKTQDIP--DHDVL 70
+ + E + +IN + N + +I + +++ ++L
Sbjct: 1 MHYAFKYAQLE--GEIVAAMDINTVANAVYAHNYGHNFVKTRNIQSLSVKEVGKLQANML 58
Query: 71 LAGFPCQPFSQAG 83
L PCQP ++ G
Sbjct: 59 LMSPPCQPHTRQG 71
>gi|323942311|gb|EGB38482.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli E482]
Length = 94
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN 49
+K+ D F G GG Q ++ F + + + +++ANFP
Sbjct: 12 IKVFDFFSGCGGTSQGFHQA----GMDIVFGLDFDVDAASSFRANFPQ 55
>gi|299756527|ref|XP_001829400.2| hypothetical protein CC1G_00579 [Coprinopsis cinerea okayama7#130]
gi|298411717|gb|EAU92360.2| hypothetical protein CC1G_00579 [Coprinopsis cinerea okayama7#130]
Length = 1235
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 30/107 (28%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK-------------------- 41
LK D+F G+ G L + +E + EI+P + +
Sbjct: 757 LKTLDVFAGVLGYSKGLSEGSGC--MEITHAIEISPSAAQTAKRNSPKTVVINQCANAVF 814
Query: 42 -TYQANFPNTLIFGDIAKIKTQD-------IPDHDVLLAGFPCQPFS 80
+ + + + +++ DV++ GFPCQ S
Sbjct: 815 QYAKKSHEGFQVAPPVQLWDSKEKIPSLPPPGSFDVIVIGFPCQAHS 861
>gi|68060073|ref|XP_672010.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56488708|emb|CAH97444.1| hypothetical protein PB000290.02.0 [Plasmodium berghei]
Length = 359
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY 38
+ DLFCG G L L + R + +++ +IN +
Sbjct: 269 NVVDLFCGAGYFTLPLLKFIGDRKINNYYAFDINHH 304
>gi|295673416|ref|XP_002797254.1| trimethylguanosine synthase [Paracoccidioides brasiliensis Pb01]
gi|226282626|gb|EEH38192.1| trimethylguanosine synthase [Paracoccidioides brasiliensis Pb01]
Length = 240
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + Q+ + ++ E P ++ + N + I + +
Sbjct: 78 VDAFAGAGGNTIAFAQSGR---WKRVYAIEKEPAVLQCAKHNAKVYGVDDKITWFEGDCM 134
Query: 65 P----------DHDVLLAGFP 75
+ V+ A P
Sbjct: 135 QILKHQLSVLSPYSVIFASPP 155
>gi|188997006|ref|YP_001931257.1| methyltransferase small [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932073|gb|ACD66703.1| methyltransferase small [Sulfurihydrogenibium sp. YO3AOP1]
Length = 388
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 28/80 (35%), Gaps = 10/80 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS------VKTYQANFPNTLIFGD 55
K+ DLFC GG + + E +I+ ++ ++ D
Sbjct: 219 FKVLDLFCNAGGFGIH----GGKKGAEFIKFVDISSFALSQVEENARLNNLKNYEIVKDD 274
Query: 56 IAKIKTQDIPDHDVLLAGFP 75
+ ++ +D+++ P
Sbjct: 275 VFDFLKKEKDKYDLIILDPP 294
>gi|315050428|ref|XP_003174588.1| trimethylguanosine synthase [Arthroderma gypseum CBS 118893]
gi|311339903|gb|EFQ99105.1| trimethylguanosine synthase [Arthroderma gypseum CBS 118893]
Length = 238
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 23/81 (28%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D+F G GG + + ++ E + ++K + N + I
Sbjct: 76 IDVFAGAGGNTIAF---AKSNRWKRVYAIEKDRETLKCAKHNAELYGVADKITWFVGDCF 132
Query: 65 P----------DHDVLLAGFP 75
+ V+ P
Sbjct: 133 ELLQDQLKDLAPYSVIFGSPP 153
>gi|302341669|ref|YP_003806198.1| methyltransferase small [Desulfarculus baarsii DSM 2075]
gi|301638282|gb|ADK83604.1| methyltransferase small [Desulfarculus baarsii DSM 2075]
Length = 248
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 12/86 (13%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQ 62
+ DL G G + L L + EI+P + Q N + I +Q
Sbjct: 50 VADLCAGCGVVGLLLAARGLAGPF---LAVEIDPLAAHCCQLNQAHAGLDGQTIRADLSQ 106
Query: 63 DIPD-----HDVLLAGFPCQPFSQAG 83
D P + +++ P FSQAG
Sbjct: 107 DHPALQPGGYKLVVCNPP---FSQAG 129
>gi|31074171|gb|AAP20556.1| DNA cytosine-5 methyltransferase 2 isoform gamma [Bos taurus]
Length = 63
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL 51
L+ +L+ GIGG+ L ++ + + ++N + + Y+ NFP+T
Sbjct: 4 LRALELYSGIGGMHQALRESCIPA--QVVAAVDVNTVANEVYKYNFPHTQ 51
>gi|221053907|ref|XP_002261701.1| PHF5-like protein [Plasmodium knowlesi strain H]
gi|193808161|emb|CAQ38864.1| PHF5-like protein, putative [Plasmodium knowlesi strain H]
Length = 1631
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN 36
+ DLFCG+G L L + ++ +++ +IN
Sbjct: 1378 NVVDLFCGVGYFTLPLLKFVGEGKIKEYYACDIN 1411
>gi|323454936|gb|EGB10805.1| hypothetical protein AURANDRAFT_62303 [Aureococcus anophagefferens]
Length = 1635
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK----TQDIPDHDVLLAG 73
L + F R EI+ +++ +A P+ L GD A+++ + ++ G
Sbjct: 839 LSKAFALRGARIVAVGEIDETALEMLRAEHPDALAMGDTARLEYRNVPWSRHAYRIVCGG 898
Query: 74 FPCQ 77
FPCQ
Sbjct: 899 FPCQ 902
>gi|323447623|gb|EGB03537.1| hypothetical protein AURANDRAFT_67921 [Aureococcus anophagefferens]
Length = 675
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 18 LEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK----TQDIPDHDVLLAG 73
L + F R EI+ +++ +A P+ L GD A+++ + ++ G
Sbjct: 220 LSKAFALRGARIVAVGEIDETALEMLRAEHPDALAMGDTARLEYRNVPWSRHAYRIVCGG 279
Query: 74 FPCQ 77
FPCQ
Sbjct: 280 FPCQ 283
>gi|239929808|ref|ZP_04686761.1| hypothetical protein SghaA1_16395 [Streptomyces ghanaensis ATCC
14672]
Length = 242
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 23/75 (30%), Gaps = 6/75 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLFC GG + + +I + I T
Sbjct: 16 RLLDLFCCAGGAAVGYARAGFA-----VDGCDI-ADRPNYPFPRHRGDALAYLAHLIATG 69
Query: 63 DIPDHDVLLAGFPCQ 77
+I + + A PCQ
Sbjct: 70 EIRRYAFVHASPPCQ 84
>gi|11994548|dbj|BAB02735.1| unnamed protein product [Arabidopsis thaliana]
Length = 751
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNH-RNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
L + LF GIGG + L++ H + V S ++ +K + T I +IK
Sbjct: 630 LTVLSLFSGIGGAEIALDRLGIHLKGVVSVESCGLSRNILKRWWQTSGQTGELVQIEEIK 689
Query: 61 TQDIPDHDVLL---AGFP---CQPFSQ 81
+ + L+ GF CQ S
Sbjct: 690 SLTAKRLETLMQRFGGFDFVICQNPST 716
>gi|329936165|ref|ZP_08285958.1| hypothetical protein SGM_1450 [Streptomyces griseoaurantiacus
M045]
gi|329304275|gb|EGG48155.1| hypothetical protein SGM_1450 [Streptomyces griseoaurantiacus
M045]
Length = 245
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 6/75 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLF GG + +I P + + + L + A I +
Sbjct: 16 RLLDLFSCAGGAATGYARAGFA-----VDGCDIVPRPNYPFPQHHGDALAYLA-ALIASG 69
Query: 63 DIPDHDVLLAGFPCQ 77
+I + + A PCQ
Sbjct: 70 EIARYAFVHASPPCQ 84
>gi|302671270|ref|YP_003831230.1| DNA-cytosine methyltransferase [Butyrivibrio proteoclasticus B316]
gi|302395743|gb|ADL34648.1| DNA-cytosine methyltransferase [Butyrivibrio proteoclasticus B316]
Length = 579
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Query: 39 SVKTYQANFPNTLIFGDIAKIKTQDI-PDHDVLLAGFPCQPFSQAG 83
+ T + +IA + + D+ + G PCQ FS G
Sbjct: 245 ASYTANYDIKEDDFHWNIAFLDGKQYAGKVDLFVGGSPCQSFSFVG 290
>gi|162458589|ref|NP_001105094.1| DNA methyl transferase 106 [Zea mays]
gi|22135461|gb|AAM93211.1|AF527610_1 DNA methyltransferase DMT106 [Zea mays]
gi|223949331|gb|ACN28749.1| unknown [Zea mays]
Length = 659
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 15/85 (17%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGD 55
+++ ++ GIGG + L + +C S E + + K + + T
Sbjct: 538 IRVLSIYSGIGGAEVALHRLGIPL--KCVISVEESEVNRKILRRWWLKTEQTGVLRQHAG 595
Query: 56 IAKIKTQ-------DIPDHDVLLAG 73
I K+KT + D+++ G
Sbjct: 596 IWKLKTHVIEDLVKEFGGFDLIIGG 620
>gi|70991803|ref|XP_750750.1| RNA methylase family protein [Aspergillus fumigatus Af293]
gi|66848383|gb|EAL88712.1| RNA methylase family protein, putative [Aspergillus fumigatus
Af293]
gi|159124312|gb|EDP49430.1| RNA methylase family protein, putative [Aspergillus fumigatus
A1163]
Length = 238
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + +T + ++ E NP ++ + N + I +
Sbjct: 79 VDAFAGAGGNTIAFARTGK---WKRVYAIEKNPAVLQCAKHNAQVYGVADKITWFEGDCF 135
Query: 65 P----------DHDVLLAGFP 75
+ V+ A P
Sbjct: 136 SILKNQLKELAPYSVIFASPP 156
>gi|226292214|gb|EEH47634.1| trimethylguanosine synthase [Paracoccidioides brasiliensis Pb18]
Length = 240
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + Q+ + ++ E P ++ + N + I + +
Sbjct: 78 VDAFAGAGGNTIAFAQSGR---WKRVYAIEKEPAVLQCAKHNAKVYGVDDKITWFEGDCM 134
Query: 65 P----------DHDVLLAGFP 75
+ V+ A P
Sbjct: 135 QILKHQLSVLSPYSVIFASPP 155
>gi|225681023|gb|EEH19307.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 2092
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQT--------FNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L LE + FS+EI+P+ Q NF +IF
Sbjct: 119 LRVATMCSGTEAPLLALEMVIDSFKRIFGKTLKIHHLFSAEIDPFKQSYIQRNFSPDIIF 178
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFSQ 81
D+ ++ D D D+L+ GF C FS
Sbjct: 179 RDVNELIADDATTAFGSLRKVPADLDLLIVGFSCVDFSN 217
>gi|251795624|ref|YP_003010355.1| C-5 cytosine-specific DNA methylase [Paenibacillus sp. JDR-2]
gi|247543250|gb|ACT00269.1| C-5 cytosine-specific DNA methylase [Paenibacillus sp. JDR-2]
Length = 558
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG +E + +P ++ ++AN D+
Sbjct: 9 IVDNFAGGGGASTGIELA---IGRSVDVAINHDPAAIAMHKANHPDTEHYCESVWDVDPR 65
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ + C+ FS+A
Sbjct: 66 QVARGQQVALCWLSPDCKHFSKA 88
>gi|326478948|gb|EGE02958.1| hypothetical protein TEQG_01996 [Trichophyton equinum CBS 127.97]
Length = 256
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 22/81 (27%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + + ++ E + ++K + N + I
Sbjct: 76 IDAFAGAGGNTIAF---AKSNRWKRVYAIEKDRETLKCAKHNAELYGVADKITWFVGDCF 132
Query: 65 P----------DHDVLLAGFP 75
+ V+ P
Sbjct: 133 ELLQNQLKDLAPYSVIFGSPP 153
>gi|312886401|ref|ZP_07746010.1| methyltransferase [Mucilaginibacter paludis DSM 18603]
gi|311301029|gb|EFQ78089.1| methyltransferase [Mucilaginibacter paludis DSM 18603]
Length = 180
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 10/80 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK--- 58
L + DLF G G I LE R + + + + + + + +
Sbjct: 45 LNVLDLFSGTGNIS--LEFA--SRGARQVVAVDRSVHCINYVKDTARQHKVEDIVTYKAD 100
Query: 59 ---IKTQDIPDHDVLLAGFP 75
+ +D++ A P
Sbjct: 101 VFKYLEMETEQYDLIFADPP 120
>gi|84495908|ref|ZP_00994762.1| modification methylase (Cytosine-specific methyltransferase)
[Janibacter sp. HTCC2649]
gi|84382676|gb|EAP98557.1| modification methylase (Cytosine-specific methyltransferase)
[Janibacter sp. HTCC2649]
Length = 498
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 56 IAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
I + VL+ G PCQ +S G
Sbjct: 109 IRDALSSAGGGPWVLIGGPPCQAYSLVG 136
Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 13/40 (32%), Gaps = 3/40 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSV 40
+ DLF G GG+ S E++ +
Sbjct: 1 MVDLFAGPGGLNEGFSSLLRPDGDQVFRAVSSFEMDARAC 40
>gi|221126212|ref|XP_002159378.1| PREDICTED: similar to tRNA wybutosine-synthesizing protein 2
homolog, partial [Hydra magnipapillata]
Length = 490
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
I DLF GIG L ++ E NP ++
Sbjct: 304 IVDLFAGIGYFTLPY---LVKARAHTVYACEWNPNAI 337
>gi|320009147|gb|ADW03997.1| hypothetical protein Sfla_2568 [Streptomyces flavogriseus ATCC
33331]
Length = 231
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 11/75 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLFC GG +I+P Y+ + + +
Sbjct: 16 RLLDLFCCQGGAAKGYADAGFD-----VTGVDIHPQPRYPYRFVQAEAVAYVL------E 64
Query: 63 DIPDHDVLLAGFPCQ 77
DV+ A PCQ
Sbjct: 65 HGAQFDVIHASPPCQ 79
>gi|78485003|ref|YP_390928.1| C-5 cytosine-specific DNA methylase [Thiomicrospira crunogena
XCL-2]
gi|78363289|gb|ABB41254.1| C-5 cytosine-specific DNA methylase [Thiomicrospira crunogena
XCL-2]
Length = 648
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 30/108 (27%), Gaps = 29/108 (26%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-----VECFFSSEINPYSVKTYQA----------- 45
+ LFCG+GG C + + +++ +
Sbjct: 6 INHFHLFCGLGGGAKGFNMGQAKVGQVEAEFRCIGGIDSDAAAIQDFNQLAGAKGTVMDL 65
Query: 46 -------NFPNTLIFGDIAKIKTQD------IPDHDVLLAGFPCQPFS 80
++ L D + +D +++ PC+ FS
Sbjct: 66 FDASQYLDWHGHLPPEDWKEATPEDIRRAAGYERPNIVFTSPPCKGFS 113
>gi|297686112|ref|XP_002820609.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Pongo
abelii]
Length = 63
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL 51
L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQ 51
>gi|221044562|dbj|BAH13958.1| unnamed protein product [Homo sapiens]
Length = 254
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL 51
L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQ 51
>gi|167887561|gb|ACA05985.1| tRNA aspartic acid methyltransferase 1 variant 7 [Homo sapiens]
Length = 63
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL 51
L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQ 51
>gi|33322745|gb|AAQ07107.1|AF496419_1 cytosine-specific DNA methyltransferase [Lactobacillus
delbrueckii subsp. lactis]
Length = 138
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 58 KIKTQDIPDHDVLLAGFPCQPFSQA 82
I + D++ G PCQ FS+A
Sbjct: 20 HINDYVNEEVDMVXGGPPCQGFSEA 44
>gi|31874014|emb|CAD97925.1| hypothetical protein [Homo sapiens]
gi|167887557|gb|ACA05981.1| tRNA aspartic acid methyltransferase 1 variant 8 [Homo sapiens]
Length = 69
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL 51
L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQ 51
>gi|167887558|gb|ACA05982.1| tRNA aspartic acid methyltransferase 1 variant 5 [Homo sapiens]
Length = 117
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL 51
L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQ 51
>gi|167887556|gb|ACA05980.1| tRNA aspartic acid methyltransferase 1 variant 6 [Homo sapiens]
Length = 71
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL 51
L++ +L+ G+GG+ L ++ + + ++N + + Y+ NFP+T
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPA--QVVAAIDVNTVANEVYKYNFPHTQ 51
>gi|82594392|ref|XP_725405.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23480401|gb|EAA16970.1| Unknown protein [Plasmodium yoelii yoelii]
Length = 1365
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY 38
+ DLFCG G L L + + +++ +IN +
Sbjct: 1077 NVVDLFCGAGYFTLPLLKFVGDSKINNYYAFDINHH 1112
>gi|153812680|ref|ZP_01965348.1| hypothetical protein RUMOBE_03087 [Ruminococcus obeum ATCC 29174]
gi|149831196|gb|EDM86285.1| hypothetical protein RUMOBE_03087 [Ruminococcus obeum ATCC 29174]
Length = 622
Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-GDIAKIKT 61
K+ L GIG + + E + E + +++ Y+ N + +
Sbjct: 4 KVIILGAGIGAMTMGFENA----GCSVVAAYERDRRAIELYKKNISGEINELDQLGTSNL 59
Query: 62 QDIPDHDVLLAGFPCQPFSQAG 83
+D+PD D+L F + S G
Sbjct: 60 EDVPDIDILACDF-YRDLSIVG 80
>gi|47212796|emb|CAF96171.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2195
Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 29/114 (25%), Gaps = 34/114 (29%)
Query: 2 LKITDLFCGIG------------------------------GIRLDLEQTFNHRNVECFF 31
+++ LF GI L VE +
Sbjct: 1818 IRVLSLFDGIATGAWEQKPVLVASVICPSVQTGPWTRPIVLCFSGYLVLKDLGFKVETYI 1877
Query: 32 SSEINPY----SVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
+SE+ + ++ I + + D+L+ G PC S
Sbjct: 1878 ASEVCEDSIAVAAVNHEGKITQVGDVRFINQEQLHRWGPFDLLIGGSPCNDLSI 1931
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 6/65 (9%)
Query: 23 NHRNVEC--FFSSEINPYSV----KTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPC 76
+ + +SE+ S+ ++ DI K + D+++ G PC
Sbjct: 496 RDLGFKVDLYVASEVCEDSISVGVVRHEGKIKYVHDVRDITKKNIMEWGPFDLVIGGSPC 555
Query: 77 QPFSQ 81
S
Sbjct: 556 NDLSI 560
>gi|315106716|gb|EFT78692.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL030PA1]
Length = 170
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 9/78 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIA 57
DLF G G + LE R + + + + + N T + +
Sbjct: 24 TFCDLFAGSG--AVALEAA--SRGATTVVAVDRDRCACNVMKDNSRTTRLRIEVLSQTVT 79
Query: 58 KIKTQDIPDHDVLLAGFP 75
++ DV+ P
Sbjct: 80 AFLAENHRVFDVVWFDPP 97
>gi|315104247|gb|EFT76223.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL050PA2]
Length = 170
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 9/78 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIA 57
DLF G G + LE R + + + + + N T + +
Sbjct: 24 TFCDLFAGSG--AVALEAA--SRGATTVVAVDRDRCACNVMKDNSRTTRLRIEVLSQTVT 79
Query: 58 KIKTQDIPDHDVLLAGFP 75
++ DV+ P
Sbjct: 80 AFLAENHRVFDVVWFDPP 97
>gi|314966075|gb|EFT10174.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL082PA2]
gi|315094925|gb|EFT66901.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL060PA1]
gi|327328047|gb|EGE69816.1| putative methylase [Propionibacterium acnes HL103PA1]
Length = 170
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 9/78 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIA 57
DLF G G + LE R + + + + + N T + +
Sbjct: 24 TFCDLFAGSG--AVALEAA--SRGATTVVAVDRDRCACNVMKDNSRTTRLRIEVLSQTVT 79
Query: 58 KIKTQDIPDHDVLLAGFP 75
++ DV+ P
Sbjct: 80 AFLAENHRVFDVVWFDPP 97
>gi|314923868|gb|EFS87699.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL001PA1]
gi|314981848|gb|EFT25941.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL110PA3]
gi|315090773|gb|EFT62749.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL110PA4]
Length = 170
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 9/78 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIA 57
DLF G G + LE R + + + + + N T + +
Sbjct: 24 TFCDLFAGSG--AVALEAA--SRGATTVVAVDRDRCACNVMKDNSRTTRLRIEVLSQTVT 79
Query: 58 KIKTQDIPDHDVLLAGFP 75
++ DV+ P
Sbjct: 80 AFLAENHRVFDVVWFDPP 97
>gi|282854609|ref|ZP_06263944.1| RNA methyltransferase, RsmD family [Propionibacterium acnes J139]
gi|282582191|gb|EFB87573.1| RNA methyltransferase, RsmD family [Propionibacterium acnes J139]
Length = 202
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 9/78 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIA 57
DLF G G + LE R + + + + + N T + +
Sbjct: 56 TFCDLFAGSG--AVALEAA--SRGATTVVAVDRDRCACNVMKDNSRTTRLRIEVLSQTVT 111
Query: 58 KIKTQDIPDHDVLLAGFP 75
++ DV+ P
Sbjct: 112 AFLAENHRVFDVVWFDPP 129
>gi|50842943|ref|YP_056170.1| putative methylase [Propionibacterium acnes KPA171202]
gi|50840545|gb|AAT83212.1| putative methylase [Propionibacterium acnes KPA171202]
Length = 202
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 9/78 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIA 57
DLF G G + LE R + + + + + N T + +
Sbjct: 56 TFCDLFAGSG--AVALEAA--SRGATTVVAVDRDRCACNVMKDNSRTTRLRIEVLSQTVT 111
Query: 58 KIKTQDIPDHDVLLAGFP 75
++ DV+ P
Sbjct: 112 AFLAENHRVFDVVWFDPP 129
>gi|242015860|ref|XP_002428565.1| prip interacting protein. pimt, putative [Pediculus humanus
corporis]
gi|212513199|gb|EEB15827.1| prip interacting protein. pimt, putative [Pediculus humanus
corporis]
Length = 553
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D FCG+GG + T + +I+P +K + N + I I
Sbjct: 394 VIDAFCGVGGNSIQFAFTCER-----VIAIDIDPNKIKLAKHNARIYGVEDRIEFIIGDF 448
Query: 64 IPDH-----DVLLAGFP 75
DV+ P
Sbjct: 449 KQLASSMWGDVVFLSPP 465
>gi|118469810|ref|YP_886143.1| methylase [Mycobacterium smegmatis str. MC2 155]
gi|118171097|gb|ABK71993.1| methylase, putative [Mycobacterium smegmatis str. MC2 155]
Length = 222
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIA---KI 59
++ DL G G + + H E + +I P +V+ AN + D+
Sbjct: 33 RVLDLCTGSGVVAI----AAAHLGAEHVTALDICPRAVEYATANAASAAADVDVRLGTWN 88
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ + D+++ P P S A
Sbjct: 89 EALNWEPFDLVVCNPPYVPTSPA 111
>gi|56479059|ref|YP_160648.1| modification methylase (cytosine-specific methyltransferase
[Aromatoleum aromaticum EbN1]
gi|56315102|emb|CAI09747.1| Modification methylase (Cytosine-specific methyltransferase
[Aromatoleum aromaticum EbN1]
Length = 538
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
++KI DLF G GG+ +H + + S+E+ +
Sbjct: 15 IIKIVDLFAGPGGLGEGFS---SHSSFQIAVSAEMESSAH 51
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 66 DHDVLLAGFPCQPFSQAG 83
VL+ G PCQ +S G
Sbjct: 136 QPWVLIGGPPCQAYSLVG 153
>gi|198435713|ref|XP_002131256.1| PREDICTED: similar to hepatocellular carcinoma-associated antigen
137 [Ciona intestinalis]
Length = 787
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 18/92 (19%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I D FCG GG + T + +I+P ++ + N + I I
Sbjct: 589 IVDAFCGSGGNAIQFAFTCEK-----VLAIDIDPVKLENAKHNAAIYGVEDRIDFICGSF 643
Query: 64 IP-----DHDVLLAGFP--------CQPFSQA 82
D++ P C+ +S A
Sbjct: 644 FDIAPTLKADIVFLSPPWGGPEYTNCETYSIA 675
>gi|42766606|gb|AAS45433.1| At5g15380 [Arabidopsis thaliana]
Length = 307
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+ + LF GIGG + L + + S EI+ + + +F I +
Sbjct: 235 INVLSLFTGIGGGEVALHRL--QIKMNVVVSVEIS-DANRNILRSFWEQTNQKGILREFK 291
Query: 62 QDIPDHD 68
D
Sbjct: 292 DVQKLDD 298
>gi|109897861|ref|YP_661116.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudoalteromonas atlantica T6c]
gi|109700142|gb|ABG40062.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
[Pseudoalteromonas atlantica T6c]
Length = 309
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62
I DL G G I + L F + +I+P +++ + N + + I++
Sbjct: 141 ILDLCTGGGCIAIALAYAFESA---TVDAVDISPEALEVAEMNIHEHQLSDRVYPIQSDL 197
Query: 63 ----DIPDHDVLLAGFP 75
+ +D++++ P
Sbjct: 198 MAALEGQKYDLIISNPP 214
>gi|325299742|ref|YP_004259659.1| hypothetical protein Bacsa_2652 [Bacteroides salanitronis DSM
18170]
gi|324319295|gb|ADY37186.1| Conserved hypothetical protein CHP00095 [Bacteroides salanitronis
DSM 18170]
Length = 177
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 27/80 (33%), Gaps = 10/80 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP--YSVKTYQANFPNTLIFGDIA-- 57
+ DLF G G I L+L R E S E +P Y+ T I
Sbjct: 46 ITALDLFAGTGSISLEL----ISRGCEKVVSVEKDPQHYAFICKVMKEIKTDKSWTIRGD 101
Query: 58 --KIKTQDIPDHDVLLAGFP 75
K ++ D + A P
Sbjct: 102 VFKYISKCQEQFDFIFADPP 121
>gi|318060882|ref|ZP_07979603.1| hypothetical protein SSA3_23258 [Streptomyces sp. SA3_actG]
gi|318075931|ref|ZP_07983263.1| hypothetical protein SSA3_04270 [Streptomyces sp. SA3_actF]
Length = 243
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 22/76 (28%), Gaps = 6/76 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLFC GG + + +I + + +
Sbjct: 16 RLLDLFCCAGGAATGYARA----GFDVVG-VDI-ADRPNYPYTWHRADALAFLTGLLDSG 69
Query: 63 DIPDHDVLLAGFPCQP 78
+I + + PCQ
Sbjct: 70 EIARFNAVHTSPPCQA 85
>gi|224613538|gb|ACN60348.1| DNA [Salmo salar]
Length = 466
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 16/69 (23%)
Query: 28 ECFFSSE-INPYSVKTYQANFPNTLIFGDIAKI---------------KTQDIPDHDVLL 71
E ++ E +P + N T+ D + + D ++L
Sbjct: 1 ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQRLPQKGDVEMLC 60
Query: 72 AGFPCQPFS 80
G PCQ FS
Sbjct: 61 GGPPCQGFS 69
>gi|83648364|ref|YP_436799.1| site-specific DNA methylase [Hahella chejuensis KCTC 2396]
gi|83636407|gb|ABC32374.1| Site-specific DNA methylase [Hahella chejuensis KCTC 2396]
Length = 327
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 23/86 (26%), Gaps = 8/86 (9%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE-INPYSVKTYQANFPNTLIFGDIA-- 57
M DLFCG GG + + + + +I I
Sbjct: 1 MPTFVDLFCG-GGFGA---RGAVRGGGKPLLGIDAWDLAVQTYQANFPTAEVIHSKIEDT 56
Query: 58 -KIKTQDIPDHDVLLAGFPCQPFSQA 82
I DVLL C S A
Sbjct: 57 DPILLAKKFKPDVLLTSPECTSHSIA 82
>gi|24374531|ref|NP_718574.1| prophage LambdaSo, type II DNA modification methyltransferase,
putative [Shewanella oneidensis MR-1]
gi|24349120|gb|AAN56018.1|AE015737_16 prophage LambdaSo, type II DNA modification methyltransferase,
putative [Shewanella oneidensis MR-1]
Length = 557
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I D F G GG + + + ++ + AN P TL + D+ +
Sbjct: 5 IVDNFAGGGGASTGMAWA---LGRSVDIAINHDQDAIAMHSANHPETLHYCESVFDVDPV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ + C+ FS+A
Sbjct: 62 QATAGKPVALAWFSPDCKHFSKA 84
>gi|238894201|ref|YP_002918935.1| putative site-specific DNA methylase [Klebsiella pneumoniae
NTUH-K2044]
gi|238546517|dbj|BAH62868.1| putative site-specific DNA methylase [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
Length = 656
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I D F G GG +E + + +V ++ N P+TL + D++
Sbjct: 5 IVDNFAGGGGASTGIEMA---IGRSVDIAINHDENAVAMHRTNHPDTLHYCESVFDVSPG 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ C+ FS+A
Sbjct: 62 AATSGKPVGLTWFSPDCRHFSKA 84
>gi|255089038|ref|XP_002506441.1| SNF2 super family [Micromonas sp. RCC299]
gi|226521713|gb|ACO67699.1| SNF2 super family [Micromonas sp. RCC299]
Length = 2616
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN--------HRNVECFFSSEINPYSVKTYQANFPNTLIF 53
+++ + G L L++ N V+ FS EI P+ + NF ++F
Sbjct: 272 IRVATMCSGTESPLLALDKIGNATQIEYGQKLGVDHVFSCEIEPFKQAYIERNFAPPILF 331
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFSQ 81
DI ++ + D+L+AG C +S
Sbjct: 332 RDIRELDGDQATTAYGALVDVPGNVDMLVAGTSCVDYSN 370
>gi|296109369|ref|YP_003616318.1| protein of unknown function Met10 [Methanocaldococcus infernus ME]
gi|295434183|gb|ADG13354.1| protein of unknown function Met10 [Methanocaldococcus infernus ME]
Length = 331
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
+ D+F G+G + + +S +INPY++
Sbjct: 196 VIDMFAGVGPFSIACKMAKK------IYSIDINPYAI 226
>gi|301632038|ref|XP_002945098.1| PREDICTED: hypothetical protein LOC100485715 [Xenopus (Silurana)
tropicalis]
Length = 368
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
D+++ GFPCQ S AG
Sbjct: 23 WRGSVDIVVGGFPCQDISFAG 43
>gi|300858340|ref|YP_003783323.1| hypothetical protein cpfrc_00922 [Corynebacterium
pseudotuberculosis FRC41]
gi|300685794|gb|ADK28716.1| hypothetical protein cpfrc_00922 [Corynebacterium
pseudotuberculosis FRC41]
gi|302206058|gb|ADL10400.1| N6-adenine-specific methylasee [Corynebacterium pseudotuberculosis
C231]
gi|302330609|gb|ADL20803.1| Putative DNA methylase [Corynebacterium pseudotuberculosis 1002]
gi|308276294|gb|ADO26193.1| Putative DNA methylase [Corynebacterium pseudotuberculosis I19]
Length = 192
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 28/80 (35%), Gaps = 11/80 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-------FGD 55
++ DLF G G L LE R + E NP +V+ + N
Sbjct: 46 RVLDLFAGSG--ALGLEAA--SRGADEVVLVENNPKAVQIIRHNMQVVGHPNVTVAEMKA 101
Query: 56 IAKIKTQDIPDHDVLLAGFP 75
+ + D++LA P
Sbjct: 102 STYVASAPKEYFDMVLADPP 121
>gi|167552502|ref|ZP_02346255.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205322882|gb|EDZ10721.1| C-5 cytosine-specific DNA methylase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 693
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD----IAKI 59
I D F G GG +E + +P +V + N P+TL + + +
Sbjct: 6 IVDNFAGGGGASTGIEMA---IGRSVDIAINHDPNAVAMHTTNHPDTLHYCESVFTVNPK 62
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ C+ FS+A
Sbjct: 63 IVTAGRPVALAWYSPDCRHFSKA 85
>gi|99081532|ref|YP_613686.1| C-5 cytosine-specific DNA methylase [Ruegeria sp. TM1040]
gi|99037812|gb|ABF64424.1| prophage LambdaSo; type II DNA modification methyltransferase;
putative [Ruegeria sp. TM1040]
Length = 697
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI----FGDIAKI 59
I D F G GG +E + + +P ++ ++AN P L I +
Sbjct: 21 IVDSFAGGGGASTGIELALDRS---PDIAINHDPAALALHEANHPEALHLSENVYRIDPL 77
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ ++ C+ FS+A
Sbjct: 78 EHLSGKHIGLMWFSPDCKHFSKA 100
>gi|256081138|ref|XP_002576830.1| hypothetical protein [Schistosoma mansoni]
gi|238662115|emb|CAZ33067.1| expressed protein [Schistosoma mansoni]
Length = 213
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 13/83 (15%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI--------- 52
+ + DL CG G + + C EI+ +V +Q+N +
Sbjct: 53 MSVADLGCGTGMLSIGA----KLLGASCVLGFEIDEDAVNQFQSNLETCEMLDENIDVTL 108
Query: 53 FGDIAKIKTQDIPDHDVLLAGFP 75
+ + D ++ P
Sbjct: 109 CDVVRLFHENNNKFVDTVILNPP 131
>gi|291438141|ref|ZP_06577531.1| gp77 [Streptomyces ghanaensis ATCC 14672]
gi|291341036|gb|EFE67992.1| gp77 [Streptomyces ghanaensis ATCC 14672]
Length = 233
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 23/75 (30%), Gaps = 6/75 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLFC GG + + +I + I T
Sbjct: 7 RLLDLFCCAGGAAVGYARAGFA-----VDGCDI-ADRPNYPFPRHRGDALAYLAHLIATG 60
Query: 63 DIPDHDVLLAGFPCQ 77
+I + + A PCQ
Sbjct: 61 EIRRYAFVHASPPCQ 75
>gi|323669706|emb|CBJ94829.1| putative membrane protein [Salmonella bongori]
Length = 647
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 18/50 (36%), Gaps = 5/50 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC-----FFSSEINPYSVKTYQAN 46
+ ++D CG GG+ + + + + +I+P +
Sbjct: 551 ITVSDPACGAGGMIVAMAEAMLEAGFNPQKQMMVYCVDIDPVAAMMCYIQ 600
>gi|254583902|ref|XP_002497519.1| ZYRO0F07436p [Zygosaccharomyces rouxii]
gi|238940412|emb|CAR28586.1| ZYRO0F07436p [Zygosaccharomyces rouxii]
Length = 291
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 19/85 (22%)
Query: 3 KITDLFCGIGG--IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK 60
K+ D+FCG GG I+L LE E + + + + N + + I
Sbjct: 96 KVLDVFCGAGGNTIQLALE-------FEKVYGVDFSLDHLYCTYKNAESYNVNDHIWLKY 148
Query: 61 TQDIP----------DHDVLLAGFP 75
D P
Sbjct: 149 GAWEKLAEKGRFAKIGIDFAFGSPP 173
>gi|170086666|ref|XP_001874556.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649756|gb|EDR13997.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1926
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDLE--------QTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L LE Q + ++E FS EI P+ + NF L+F
Sbjct: 63 LRVATMCSGTESPLLALELMQKSIYKQHGVNFDIEHVFSCEIEPFKQAYIERNFQPPLLF 122
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFSQ 81
D+ ++ + D D+L+AG C +S
Sbjct: 123 RDVCELGDGEAHTAYGALAPVPGDVDILIAGTSCVDYSN 161
>gi|297159668|gb|ADI09380.1| hypothetical protein SBI_06260 [Streptomyces bingchenggensis BCW-1]
Length = 395
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
++ DL CGIGG + + + + +P +
Sbjct: 103 RVADLCCGIGGDAVAFARAGI-----PVLAVDRDPLTC 135
>gi|119469769|ref|XP_001257977.1| RNA methylase family protein, putative [Neosartorya fischeri NRRL
181]
gi|119406129|gb|EAW16080.1| RNA methylase family protein, putative [Neosartorya fischeri NRRL
181]
Length = 238
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + +T + ++ E NP ++ + N + I +
Sbjct: 79 VDAFAGAGGNTIAFARTGK---WKRVYAIEKNPAVLQCAKHNAQVYGVADKITWFEGDCF 135
Query: 65 P----------DHDVLLAGFP 75
+ V+ A P
Sbjct: 136 SILKDQLKELAPYSVIFASPP 156
>gi|251788451|ref|YP_003003172.1| 23S rRNA 5-methyluridine methyltransferase [Dickeya zeae Ech1591]
gi|247537072|gb|ACT05693.1| RNA methyltransferase, TrmA family [Dickeya zeae Ech1591]
Length = 444
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 3 KITDLFCGIGGIRLDL-EQTFNHRNVECFFS 32
++ DLFCG+G L L E+ VE +
Sbjct: 295 RVLDLFCGMGNFTLPLAERAGRVVGVEGVAA 325
>gi|327412865|emb|CAX67872.1| putative membrane protein [Salmonella bongori]
Length = 647
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 18/50 (36%), Gaps = 5/50 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC-----FFSSEINPYSVKTYQAN 46
+ ++D CG GG+ + + + + +I+P +
Sbjct: 551 ITVSDPACGAGGMIVAMAEAMLEAGFNPQKQMMVYCVDIDPVAAMMCYIQ 600
>gi|302415627|ref|XP_003005645.1| DNA methyltransferase Dim-2 [Verticillium albo-atrum VaMs.102]
gi|261355061|gb|EEY17489.1| DNA methyltransferase Dim-2 [Verticillium albo-atrum VaMs.102]
Length = 1373
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ 44
DLFCG G LE++ +E ++++IN +V TY
Sbjct: 789 FDLFCGGGNFGRGLEESGA---IEMRWANDINMRAVHTYM 825
>gi|290510874|ref|ZP_06550244.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. 1_1_55]
gi|289777590|gb|EFD85588.1| DNA (cytosine-5-)-methyltransferase [Klebsiella sp. 1_1_55]
Length = 616
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I D F G GG +E + + +V ++ N P+TL + D++
Sbjct: 5 IVDNFAGGGGASTGIEMA---LGRSVDIAINHDENAVAMHRTNHPDTLHYCESVFDVSPG 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ C+ FS+A
Sbjct: 62 AATSGKPVGLTWFSPDCRHFSKA 84
>gi|295105242|emb|CBL02786.1| C-5 cytosine-specific DNA methylase. [Faecalibacterium prausnitzii
SL3/3]
Length = 306
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 12/75 (16%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ LF GIGG L E T+ ++SEI + + + F N
Sbjct: 233 TLGSLFDGIGGFPLVWETTYGKGTAR--WASEIEEFPIAVTKRRFGND---------SEN 281
Query: 63 DIPDHDVLLAGFPCQ 77
+ VL G CQ
Sbjct: 282 EGNSGTVLCGGN-CQ 295
>gi|308061356|gb|ADO03244.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori
Cuz20]
Length = 76
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 4/34 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI 35
L LF G G R L EC +++I
Sbjct: 36 LTYISLFSGAGVGRYGL----LEEGFECVATNKI 65
>gi|167566476|ref|ZP_02359392.1| hypothetical protein BoklE_28219 [Burkholderia oklahomensis
EO147]
Length = 413
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 63 DIPDHDVLLAGFPCQPFSQAG 83
D ++AGFPCQ S AG
Sbjct: 23 WRGRVDCVVAGFPCQDLSVAG 43
>gi|302520412|ref|ZP_07272754.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|318057318|ref|ZP_07976041.1| hypothetical protein SSA3_05226 [Streptomyces sp. SA3_actG]
gi|318075330|ref|ZP_07982662.1| hypothetical protein SSA3_01065 [Streptomyces sp. SA3_actF]
gi|302429307|gb|EFL01123.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length = 230
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 6/74 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
DLFC GG + + ++ + + + L A I + +I
Sbjct: 7 LDLFCCAGGAATGYARA----GFDVIG-VDLVDRPRYPFPIHRADALSHLA-ALIDSGEI 60
Query: 65 PDHDVLLAGFPCQP 78
+ ++ A PCQ
Sbjct: 61 ERYALVHASPPCQA 74
>gi|326559238|gb|EGE09669.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Moraxella catarrhalis 46P47B1]
gi|326559877|gb|EGE10277.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Moraxella catarrhalis 7169]
gi|326560774|gb|EGE11141.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Moraxella catarrhalis 103P14B1]
gi|326563515|gb|EGE13774.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Moraxella catarrhalis 12P80B1]
gi|326569637|gb|EGE19689.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Moraxella catarrhalis BC1]
gi|326570118|gb|EGE20163.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Moraxella catarrhalis BC8]
gi|326570856|gb|EGE20880.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Moraxella catarrhalis BC7]
gi|326574405|gb|EGE24347.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Moraxella catarrhalis 101P30B1]
gi|326576001|gb|EGE25924.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Moraxella catarrhalis CO72]
gi|326576413|gb|EGE26322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Moraxella catarrhalis O35E]
Length = 370
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+I DL G G I + L + F N++ +++I+ +++ N + + + +
Sbjct: 187 RILDLCTGSGCIAIALAKAFPDANID---ATDIDKDALEVAWTNVEHHELAHQVNLL 240
>gi|296113394|ref|YP_003627332.1| ribosomal large subunit L3 glutamine methyltransfere [Moraxella
catarrhalis RH4]
gi|295921088|gb|ADG61439.1| ribosomal large subunit L3 glutamine methyltransfere [Moraxella
catarrhalis RH4]
Length = 370
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+I DL G G I + L + F N++ +++I+ +++ N + + + +
Sbjct: 187 RILDLCTGSGCIAIALAKAFPDANID---ATDIDKDALEVAWTNVEHHELAHQVNLL 240
>gi|154312053|ref|XP_001555355.1| hypothetical protein BC1G_06060 [Botryotinia fuckeliana B05.10]
gi|150850710|gb|EDN25903.1| hypothetical protein BC1G_06060 [Botryotinia fuckeliana B05.10]
Length = 1152
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 65 PDHDVLLAGFPCQPFSQA 82
D D+++ G PCQ +S+A
Sbjct: 688 GDIDMIVGGPPCQGWSRA 705
>gi|149002241|ref|ZP_01827183.1| hypothetical protein CGSSp14BS69_01329 [Streptococcus pneumoniae
SP14-BS69]
gi|168490540|ref|ZP_02714683.1| conserved domain protein [Streptococcus pneumoniae CDC0288-04]
gi|225860575|ref|YP_002742084.1| hypothetical protein SPT_0600 [Streptococcus pneumoniae
Taiwan19F-14]
gi|237650161|ref|ZP_04524413.1| hypothetical protein SpneC1_05447 [Streptococcus pneumoniae CCRI
1974]
gi|237821760|ref|ZP_04597605.1| hypothetical protein SpneC19_05522 [Streptococcus pneumoniae CCRI
1974M2]
gi|298229932|ref|ZP_06963613.1| hypothetical protein SpneCMD_04582 [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298255644|ref|ZP_06979230.1| hypothetical protein SpneCM_08617 [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298502364|ref|YP_003724304.1| hypothetical protein HMPREF0837_10862 [Streptococcus pneumoniae
TCH8431/19A]
gi|147759556|gb|EDK66547.1| hypothetical protein CGSSp14BS69_01329 [Streptococcus pneumoniae
SP14-BS69]
gi|183574997|gb|EDT95525.1| conserved domain protein [Streptococcus pneumoniae CDC0288-04]
gi|225727617|gb|ACO23468.1| conserved domain protein [Streptococcus pneumoniae Taiwan19F-14]
gi|298237959|gb|ADI69090.1| conserved hypothetical protein [Streptococcus pneumoniae
TCH8431/19A]
gi|327390310|gb|EGE88651.1| hypothetical protein SPAR5_0552 [Streptococcus pneumoniae
GA04375]
gi|332076406|gb|EGI86869.1| hypothetical protein SPAR68_0593 [Streptococcus pneumoniae
GA41301]
Length = 54
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTY 43
DLF G GG L ++ + EI+ +VKTY
Sbjct: 7 IDLFSGAGGTTSGL----KKSGIDVQVAVEIDSVAVKTY 41
>gi|254303554|ref|ZP_04970912.1| DNA (cytosine-5-)-methyltransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323746|gb|EDK88996.1| DNA (cytosine-5-)-methyltransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 492
Score = 36.1 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 12/57 (21%)
Query: 28 ECFFSS-EINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ +F++ +I+ + + G + D+ + G PCQ FS G
Sbjct: 156 QSYFANYDIDEENFHWNVSFLDGRQYTGKV-----------DLFVGGSPCQSFSLVG 201
>gi|325093103|gb|EGC46413.1| SNF2 family helicase [Ajellomyces capsulatus H88]
Length = 2239
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQT--------FNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L LE N+ FS+EI+P+ Q NF +IF
Sbjct: 180 LRVATMCSGTEAPLLALEMVMASFKKIFGQKFNMRHLFSAEIDPFKQSYIQRNFSPDIIF 239
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFSQ 81
D+ ++ + D+L+ GF C FS
Sbjct: 240 RDVNELIADEAVTAFGSLRKVPSTLDLLVVGFSCVDFSN 278
>gi|240275730|gb|EER39243.1| DNA repair protein RAD8 [Ajellomyces capsulatus H143]
Length = 1838
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQT--------FNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L LE N+ FS+EI+P+ Q NF +IF
Sbjct: 119 LRVATMCSGTEAPLLALEMVMASFKKIFGQKFNMRHLFSAEIDPFKQSYIQRNFSPDIIF 178
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFSQ 81
D+ ++ + D+L+ GF C FS
Sbjct: 179 RDVNELIADEAVTAFGSLRKVPSTLDLLVVGFSCVDFSN 217
>gi|226227218|ref|YP_002761324.1| DNA methyltransferase [Gemmatimonas aurantiaca T-27]
gi|226090409|dbj|BAH38854.1| DNA methyltransferase [Gemmatimonas aurantiaca T-27]
Length = 447
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF----GDIAKI 59
I D F G GG L +E + + ++ +QAN P + + + +
Sbjct: 8 IIDSFAGGGGASLGIELA---LGRSPDVAINHDAEAIALHQANHPTSKHYREDVWQVDPL 64
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ ++ C+ FS+A
Sbjct: 65 EATGGRPVGLMWLSPDCKHFSKA 87
>gi|327303280|ref|XP_003236332.1| RNA methylase [Trichophyton rubrum CBS 118892]
gi|326461674|gb|EGD87127.1| RNA methylase [Trichophyton rubrum CBS 118892]
Length = 238
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 22/81 (27%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + + ++ E + ++K + N + I
Sbjct: 76 IDAFAGAGGNTIAF---AKSNRWKRVYAIEKDRETLKCAKHNAELYGVADKITWFVGDCF 132
Query: 65 P----------DHDVLLAGFP 75
+ V+ P
Sbjct: 133 ELLQNQLKDLAPYSVIFGSPP 153
>gi|125544200|gb|EAY90339.1| hypothetical protein OsI_11916 [Oryza sativa Indica Group]
Length = 690
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 27/103 (26%), Gaps = 30/103 (29%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D F G+GG + + +I+P + Q N + I ++
Sbjct: 515 VIDCFTGVGGNAIHF-----ANKCRHVIAIDIDPQKIDCAQHNATVYGVHDHIDFVRGDF 569
Query: 64 IPDHDVL----------LAGF---------------PCQPFSQ 81
I L G PC +S
Sbjct: 570 IHVAPRLKGETVFMSPPWGGPDYAKVDVYDIKTMLKPCDGYSL 612
>gi|327413038|emb|CAX68066.1| conserved hypothetical protein [Salmonella enterica subsp. VII]
Length = 644
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 18/50 (36%), Gaps = 5/50 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVEC-----FFSSEINPYSVKTYQAN 46
+ ++D CG GG+ + + + + +I+P +
Sbjct: 548 ITVSDPACGAGGMIVAMAEAMLEAGFNPQKQMMVYCVDIDPVAAMMCYIQ 597
>gi|217033021|ref|ZP_03438491.1| hypothetical protein HPB128_4g1 [Helicobacter pylori B128]
gi|298735812|ref|YP_003728337.1| hypothetical protein HPB8_316 [Helicobacter pylori B8]
gi|216945248|gb|EEC23928.1| hypothetical protein HPB128_4g1 [Helicobacter pylori B128]
gi|298355001|emb|CBI65873.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 432
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LKI D CG G ++ + +EINP ++ + F N + +K
Sbjct: 70 LKILDCCCGNGNF---FAYLETKTSLNNLYFNEINPKRIEHVKKYFGNNIHLSCKDFLKF 126
Query: 62 QDIPDHDVLLAGFP 75
+D+++A P
Sbjct: 127 DRATLYDLIVANPP 140
>gi|217034257|ref|ZP_03439675.1| hypothetical protein HP9810_2g36 [Helicobacter pylori 98-10]
gi|216943317|gb|EEC22779.1| hypothetical protein HP9810_2g36 [Helicobacter pylori 98-10]
Length = 432
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LKI D CG G ++ + +EINP ++ + F N + +K
Sbjct: 70 LKILDCCCGNGNF---FAYLETKTSLNNLYFNEINPKRIEHVKKYFGNNIHLSCKDFLKF 126
Query: 62 QDIPDHDVLLAGFP 75
+D+++A P
Sbjct: 127 DRATLYDLIVANPP 140
>gi|302558936|ref|ZP_07311278.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302476554|gb|EFL39647.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length = 431
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK 41
+ DL CGIGG L + + + +P + +
Sbjct: 135 VADLCCGIGGDALAFARAGIR-----VLAVDRDPLTCQ 167
>gi|289621417|emb|CBI52200.1| unnamed protein product [Sordaria macrospora]
Length = 418
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 19/67 (28%), Gaps = 2/67 (2%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
DLF G GG + + + + E + ++ Q N + I +
Sbjct: 85 IDLFGGAGGNVIAF--ALSSGRWDRIIAIEKDKSTLACAQHNAEVYDVLDKITWVHGDSF 142
Query: 65 PDHDVLL 71
Sbjct: 143 EVMRRFW 149
>gi|185177639|pdb|2YX1|A Chain A, Crystal Structure Of M.Jannaschii Trna M1g37
Methyltransferase
gi|185177640|pdb|2YX1|B Chain B, Crystal Structure Of M.Jannaschii Trna M1g37
Methyltransferase
Length = 336
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 23/56 (41%), Gaps = 6/56 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
+ D F G+G + + ++ +INP++++ + N + I I
Sbjct: 199 VVDXFAGVGPFSIACKNAKK------IYAIDINPHAIELLKKNIKLNKLEHKIIPI 248
>gi|115453397|ref|NP_001050299.1| Os03g0396900 [Oryza sativa Japonica Group]
gi|14029021|gb|AAK52562.1|AC079853_15 Unknown protein [Oryza sativa Japonica Group]
gi|108708634|gb|ABF96429.1| WW domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548770|dbj|BAF12213.1| Os03g0396900 [Oryza sativa Japonica Group]
gi|215737194|dbj|BAG96123.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625074|gb|EEE59206.1| hypothetical protein OsJ_11156 [Oryza sativa Japonica Group]
Length = 690
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 27/103 (26%), Gaps = 30/103 (29%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D F G+GG + + +I+P + Q N + I ++
Sbjct: 515 VIDCFTGVGGNAIHF-----ANKCRHVIAIDIDPQKIDCAQHNATVYGVHDHIDFVRGDF 569
Query: 64 IPDHDVL----------LAGF---------------PCQPFSQ 81
I L G PC +S
Sbjct: 570 IHVAPRLKGETVFMSPPWGGPDYAKVDVYDIKTMLKPCDGYSL 612
>gi|328706457|ref|XP_003243103.1| PREDICTED: hypothetical protein LOC100570687 [Acyrthosiphon pisum]
Length = 426
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 14/78 (17%)
Query: 5 TDLFCGIGG--IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
D FCG GG I+L + +I+PY +K + N + I I
Sbjct: 265 LDPFCGAGGNIIQLAFTS-------NLVIAVDIDPYKIKLARNNAEIYGVAHKIEFIVGN 317
Query: 63 DIPDH-----DVLLAGFP 75
DV+ P
Sbjct: 318 FFEICSMLKADVICMSPP 335
>gi|322832506|ref|YP_004212533.1| C-5 cytosine-specific DNA methylase [Rahnella sp. Y9602]
gi|321167707|gb|ADW73406.1| C-5 cytosine-specific DNA methylase [Rahnella sp. Y9602]
Length = 665
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 24/83 (28%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG +E + + ++ + N D+ I
Sbjct: 5 IVDNFAGGGGASTGIEMA---TGRSVDIAINHDENAIAMHSTNHPETLHYCESVFDVDPI 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ C+ FS+A
Sbjct: 62 AATAGRPVGLAWFSPDCRHFSKA 84
>gi|326387633|ref|ZP_08209239.1| Fmu (Sun) [Novosphingobium nitrogenifigens DSM 19370]
gi|326207679|gb|EGD58490.1| Fmu (Sun) [Novosphingobium nitrogenifigens DSM 19370]
Length = 393
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEIN 36
+ DL G GG L L +R + +I+
Sbjct: 206 TVIDLCAGAGGKTLALAAAMENRGR--LVACDID 237
>gi|189485569|ref|YP_001956510.1| putative N6-adenine-specific methylase [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287528|dbj|BAG14049.1| putative N6-adenine-specific methylase [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 200
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 9/81 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFS--SEIN----PYSVKTYQANFPNTLIFGDIA 57
DLF G G + +E + F+ S+I+ +V N ++ DI
Sbjct: 49 FIDLFAGAG--SVGIEALSRGAK-KVVFAELSDISLSLIKRNVNMLGFNDKAKIVKCDII 105
Query: 58 KIKTQDIPDHDVLLAGFPCQP 78
K +D++ G P +
Sbjct: 106 KDFAVLQDKYDIIFMGPPYKD 126
>gi|148236727|ref|NP_001085693.1| trimethylguanosine synthase 1 [Xenopus laevis]
gi|49119211|gb|AAH73206.1| MGC80481 protein [Xenopus laevis]
Length = 837
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D FCG+GG + + N + +I+P + + N + I I
Sbjct: 683 VVDAFCGVGGNAIQFAKAGNR-----VIAVDIDPAKLDFARNNAEVYGVTDQIEFILGDF 737
Query: 64 IP-----DHDVLLAGFP 75
+ D + P
Sbjct: 738 MVLAPALKADAIFLSPP 754
>gi|255074065|ref|XP_002500707.1| hypothetical protein MICPUN_57348 [Micromonas sp. RCC299]
gi|226515970|gb|ACO61965.1| hypothetical protein MICPUN_57348 [Micromonas sp. RCC299]
Length = 945
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 4/39 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
LK+ LF G G + L Q E +E + +
Sbjct: 11 LKVASLFSGCGVLDYGLTQA----GHEIILQTESDDAAR 45
>gi|325267341|ref|ZP_08134003.1| ribosomal RNA small subunit methyltransferase D [Kingella
denitrificans ATCC 33394]
gi|324981278|gb|EGC16928.1| ribosomal RNA small subunit methyltransferase D [Kingella
denitrificans ATCC 33394]
Length = 190
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 11/81 (13%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
L + DLF G G L E H + E+N + Q + + +
Sbjct: 56 LTMLDLFAGSG--ALGFESASRHA--KTVVMCELNRQAAAMLQQHRQMFQLAQQVQIHAQ 111
Query: 60 -----KTQDIPDHDVLLAGFP 75
TQ D+++ P
Sbjct: 112 EALQFLTQTQQQFDIVMLDPP 132
>gi|228471480|ref|ZP_04056261.1| C-5 cytosine-specific DNA methylase [Porphyromonas uenonis 60-3]
gi|228306692|gb|EEK15843.1| C-5 cytosine-specific DNA methylase [Porphyromonas uenonis 60-3]
Length = 291
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 47 FPNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFS 80
+ I+GDI + ++ D+L GFPCQ FS
Sbjct: 1 MDSFPIYGDITSLNGRNFKGAFDILCGGFPCQAFS 35
>gi|282535271|gb|ADA82477.1| putative C-specific methylase [Escherichia phage K1ind3]
gi|282547372|gb|ADA82428.1| putative C-specific methylase [Escherichia phage K1ind2]
Length = 309
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 17/77 (22%), Gaps = 40/77 (51%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66
F GIGG L L D
Sbjct: 50 FFAGIGGWPLALRLAGVPE----------------------------------------D 69
Query: 67 HDVLLAGFPCQPFSQAG 83
+ PCQPFS AG
Sbjct: 70 APLWTGSPPCQPFSAAG 86
>gi|194706928|gb|ACF87548.1| unknown [Zea mays]
Length = 334
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 28 ECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD--IPDHDVLLAGFPCQPFSQAG 83
E + +IN + Y+ NF + G+I + D L PCQP+++ G
Sbjct: 8 EVVEAFDINDVANDVYEHNFGHRPCQGNIQTLTASDLDKYKAHAWLLSPPCQPYTRQG 65
>gi|326469525|gb|EGD93534.1| RNA methylase [Trichophyton tonsurans CBS 112818]
Length = 238
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 22/81 (27%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + + ++ E + ++K + N + I
Sbjct: 76 IDAFAGAGGNTIAF---AKSNRWKRVYAIEKDRETLKCAKHNAELYGVADKITWFVGDCF 132
Query: 65 P----------DHDVLLAGFP 75
+ V+ P
Sbjct: 133 ELLQNQLKDLAPYSVIFGSPP 153
>gi|295104947|emb|CBL02491.1| C-5 cytosine-specific DNA methylase. [Faecalibacterium prausnitzii
SL3/3]
Length = 167
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
+ LF GIGG L + T+ + SEI+ +
Sbjct: 119 TLGSLFDGIGGFPLVFQSTYGE--GTAIWGSEIDSFC 153
>gi|311279157|ref|YP_003941388.1| C-5 cytosine-specific DNA methylase [Enterobacter cloacae SCF1]
gi|308748352|gb|ADO48104.1| C-5 cytosine-specific DNA methylase [Enterobacter cloacae SCF1]
Length = 659
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 23/83 (27%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLIFGDIAKI 59
I D F G GG +E + + +V + N DI
Sbjct: 5 IVDNFAGGGGASTGIEMA---IGRSVDIAINHDQNAVAMHTTNHPETLHYCEDVFDIDPR 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ C+ FS+A
Sbjct: 62 VATAGRPVALAWFSPDCRHFSKA 84
>gi|254488424|ref|ZP_05101629.1| 23S rRNA (uracil-5-)-methyltransferase [Roseobacter sp. GAI101]
gi|214045293|gb|EEB85931.1| 23S rRNA (uracil-5-)-methyltransferase [Roseobacter sp. GAI101]
Length = 401
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 23/81 (28%), Gaps = 15/81 (18%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----- 58
+ DLF G G L L +T + E +P + +
Sbjct: 253 VIDLFAGCGTFSLPLAETAE------VHAVEGDPKMTAALDHGWRMAKGLKPVTCEARDL 306
Query: 59 ----IKTQDIPDHDVLLAGFP 75
+ ++ D ++ P
Sbjct: 307 YRRPLLPDEMGKTDAVVLDPP 327
>gi|297194175|ref|ZP_06911573.1| DNA-cytosine methyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297152146|gb|EFH31551.1| DNA-cytosine methyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 328
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 8/76 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQ 62
D+ G GG+ LE + + +T AN P+ + D+
Sbjct: 7 FVDVCAGAGGLASGLESA----GFSPVLLLDNKRQACETLLANRPHWNVVCEDLVDFLPD 62
Query: 63 DIPDH---DVLLAGFP 75
D P+ D+L AG P
Sbjct: 63 DHPETLDVDLLSAGLP 78
>gi|156549014|ref|XP_001607336.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase [Nasonia
vitripennis]
Length = 1682
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 17/94 (18%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI---FGDIAK 58
+ ++F G GG+ L L ++ + + ++ E + + T+Q N P+ + DI
Sbjct: 1224 MTSLEIFAGCGGLSLGLRESGVIKKLGS-WAIESDVDAANTFQLNNPDITVLVGHPDIVL 1282
Query: 59 IKTQDIPDHD-------------VLLAGFPCQPF 79
D L A PC+ +
Sbjct: 1283 KNAMKGEFEDSDGKLLPRKDDVEFLCATLPCENY 1316
>gi|317032892|ref|XP_001394550.2| RNA methylase family protein [Aspergillus niger CBS 513.88]
Length = 240
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 25/81 (30%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + + + ++ E NP ++ + N + I +
Sbjct: 80 VDAFAGAGGNSIAFALSGR---WKRVYAIEKNPAVLQCAKHNAKIYGVADKITWFEGDCF 136
Query: 65 P----------DHDVLLAGFP 75
+ V+ A P
Sbjct: 137 EIIKNQLKDLAPYSVVFASPP 157
>gi|301513727|ref|ZP_07238964.1| DNA-cytosine methyltransferase [Acinetobacter baumannii AB058]
Length = 53
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV 27
+K+ D F G GG L Q +
Sbjct: 1 MKVIDFFSGCGGASEGLRQAGLDITI 26
>gi|317011378|gb|ADU85125.1| hypothetical protein HPSA_05765 [Helicobacter pylori SouthAfrica7]
Length = 432
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LKI D CG G ++ + +EINP ++ + F + + +K
Sbjct: 70 LKILDCCCGNGNF---FAYLETKTSLNNLYFNEINPKRIEHVKKYFGSNIHLSCKDFLKF 126
Query: 62 QDIPDHDVLLAGFP 75
+D+++A P
Sbjct: 127 DSATLYDLIVANPP 140
>gi|329898826|ref|ZP_08272488.1| Hypothetical adenine-specific methylase yfcB [gamma proteobacterium
IMCC3088]
gi|328920726|gb|EGG28195.1| Hypothetical adenine-specific methylase yfcB [gamma proteobacterium
IMCC3088]
Length = 300
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 8/77 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62
+ DL CG G L + NH + + +I+P ++ Q N + + +++
Sbjct: 130 VLDLCCG--GGSLGILAALNHAETQVVLA-DIDPDALALAQLNVVKHQLESHVQCVQSDV 186
Query: 63 ----DIPDHDVLLAGFP 75
D++L P
Sbjct: 187 LASVPPRYFDIVLCNPP 203
>gi|307258138|ref|ZP_07539888.1| C-5 cytosine-specific DNA methylase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306863323|gb|EFM95256.1| C-5 cytosine-specific DNA methylase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 272
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 6/88 (6%)
Query: 1 MLKITDLF-CGIGGIRLDLEQTFNHRNVECFFS---SEINPYSVKTYQANFPNTLIFGDI 56
++ + LF G G Q +I + N +
Sbjct: 9 LMIVWALFDSGNGCYTQAAMQCNAMPGYSIEIYPIGIDIESKNSHFINLNLADYGRMFGD 68
Query: 57 AKIKT--QDIPDHDVLLAGFPCQPFSQA 82
+ +P D+++A PC+ +S A
Sbjct: 69 NTLFDTLDKLPQPDLIIASPPCESWSVA 96
>gi|328708014|ref|XP_003243571.1| PREDICTED: hypothetical protein LOC100573483 isoform 1
[Acyrthosiphon pisum]
Length = 445
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D FCG GG + L +T + +I+P ++ + N + I +
Sbjct: 290 VLDPFCGAGGNIIQLAKTCKR-----VLACDIDPNKIRLARHNAEIYGVAHKIDFVVGDI 344
Query: 64 IPDH-----DVLLAGFP 75
+ DV+ P
Sbjct: 345 FQIYPKLRADVVFMSPP 361
>gi|322487896|emb|CBZ23140.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 321
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 12/85 (14%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D+FCGIG L L H NV + E NP S+ + N + I + +
Sbjct: 164 VVDMFCGIGYFTLPLAM---HGNVAAIHALEKNPDSIDFVKLNAVLNKVDHLIHPVCGDN 220
Query: 64 I-------PDHDVLLAG--FPCQPF 79
D ++ G C+ F
Sbjct: 221 REVGEELLGKCDRVVMGYIPTCKSF 245
>gi|149540272|ref|XP_001517753.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus]
Length = 421
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H V + E NP++
Sbjct: 234 VDLYAGIGYFTLPF---LVHAGVAFVHACEWNPHA 265
>gi|121699691|ref|XP_001268111.1| RNA methylase family protein, putative [Aspergillus clavatus NRRL
1]
gi|119396253|gb|EAW06685.1| RNA methylase family protein, putative [Aspergillus clavatus NRRL
1]
Length = 238
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + +T + ++ E NP ++ + N + I +
Sbjct: 78 VDAFAGAGGNTIAFARTGK---WKRVYAIEKNPAVLQCAKHNAKVYGVADKITWFQGDCF 134
Query: 65 P----------DHDVLLAGFP 75
+ ++ A P
Sbjct: 135 EILKNQLKELAPYSIVFASPP 155
>gi|170039575|ref|XP_001847606.1| prip interacting protein, pimt [Culex quinquefasciatus]
gi|167863124|gb|EDS26507.1| prip interacting protein, pimt [Culex quinquefasciatus]
Length = 1016
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62
+ D FCG GG + L T N + +I+P ++ + N + I I
Sbjct: 861 VVDGFCGCGGNSIQLAFTCNQ-----VIAIDIDPKKIEMAKHNAAVYGVADRIEFIVGDF 915
Query: 63 ----DIPDHDVLLAGFP 75
D D + P
Sbjct: 916 LALADRLQADAVFLSPP 932
>gi|18071217|ref|NP_542311.1| hypothetical protein PBC5p51 [Sinorhizobium phage PBC5]
gi|17940323|gb|AAL49567.1|AF448724_4 unknown [Sinorhizobium phage PBC5]
Length = 751
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 30/111 (27%), Gaps = 33/111 (29%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN-----VECFFSSEINPYSVKTYQAN--------- 46
+ LFCG+G + C + +P +++ +
Sbjct: 11 VFTHFHLFCGLGAGAKGFNKGSARVGSLNAKFRCIGGIDNDPAAIRDFTRLAGVPGTLLD 70
Query: 47 -----------------FPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFS 80
+ DI + + P D++ PC+ FS
Sbjct: 71 LFDLEQYRAFHSRDPDPDWQQAVPDDIRRAAHGEFP--DIVFLSAPCKGFS 119
>gi|239981228|ref|ZP_04703752.1| hypothetical protein SalbJ_17459 [Streptomyces albus J1074]
Length = 230
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 22/75 (29%), Gaps = 11/75 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLFC GG E +I P Y +
Sbjct: 16 RLLDLFCCQGGAAKGYADA----GFEVTG-VDIRPQPRYPYTFVQAEAVA------FVLA 64
Query: 63 DIPDHDVLLAGFPCQ 77
+ DV+ A PCQ
Sbjct: 65 HGAEFDVIHASPPCQ 79
>gi|91205135|ref|YP_537490.1| N6-adenine-specific methylase [Rickettsia bellii RML369-C]
gi|157827532|ref|YP_001496596.1| N6-adenine-specific methylase [Rickettsia bellii OSU 85-389]
gi|91068679|gb|ABE04401.1| N6-adenine-specific methylase [Rickettsia bellii RML369-C]
gi|157802836|gb|ABV79559.1| N6-adenine-specific methylase [Rickettsia bellii OSU 85-389]
Length = 192
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 10/80 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK- 60
+K+ DLF G G L E +I+ +S+K + I + +
Sbjct: 52 IKVLDLFAGSG--SLAFESLSRGAGFATL--IDIDAFSLKIAEEFAKTLNIHNKVNLVNI 107
Query: 61 -----TQDIPDHDVLLAGFP 75
+ D++ P
Sbjct: 108 NALNLPKANTAFDLVFVDPP 127
>gi|305662550|ref|YP_003858838.1| DNA-cytosine methyltransferase [Ignisphaera aggregans DSM 17230]
gi|304377119|gb|ADM26958.1| DNA-cytosine methyltransferase [Ignisphaera aggregans DSM 17230]
Length = 320
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 6/66 (9%)
Query: 23 NHRNVECFFSSEINPYSVKTYQANFPN----TLIFGDIAK--IKTQDIPDHDVLLAGFPC 76
+ + + +P KTY++NFP +I I +++ PC
Sbjct: 23 KRGGFKILVAIDNDPACAKTYKSNFPEATVVVEDIRNINGNDIIHLAKQKPLIVIGSPPC 82
Query: 77 QPFSQA 82
+PF+ A
Sbjct: 83 EPFTGA 88
>gi|317009789|gb|ADU80369.1| hypothetical protein HPIN_05865 [Helicobacter pylori India7]
Length = 432
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LKI D CG G ++ + +EINP ++ + F + + +K
Sbjct: 70 LKILDCCCGNGNF---FAYLETKTSLNNLYFNEINPKRIEHVKKYFGSNIHLSCKDFLKF 126
Query: 62 QDIPDHDVLLAGFP 75
+D+++A P
Sbjct: 127 DRATLYDLIVANPP 140
>gi|313816805|gb|EFS54519.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL059PA1]
gi|315099253|gb|EFT71229.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL059PA2]
Length = 170
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 9/77 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIAK 58
DLF G G + LE R + + + + + N T + +
Sbjct: 25 FCDLFAGSG--AVALEAA--SRGATTVVAVDRDRCACNVMKDNSRTTRLRIKVSSQTVTA 80
Query: 59 IKTQDIPDHDVLLAGFP 75
Q+ DV+ P
Sbjct: 81 FLAQNHRVFDVVWFDPP 97
>gi|313773562|gb|EFS39528.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL074PA1]
gi|313807914|gb|EFS46395.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL087PA2]
gi|313811615|gb|EFS49329.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL083PA1]
gi|313819699|gb|EFS57413.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL046PA2]
gi|313822194|gb|EFS59908.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL036PA1]
gi|313823571|gb|EFS61285.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL036PA2]
gi|313825896|gb|EFS63610.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL063PA1]
gi|313831356|gb|EFS69070.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL007PA1]
gi|313834968|gb|EFS72682.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL056PA1]
gi|314924587|gb|EFS88418.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL036PA3]
gi|314962047|gb|EFT06148.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL002PA2]
gi|314974232|gb|EFT18328.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL053PA1]
gi|314976658|gb|EFT20753.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL045PA1]
gi|314978858|gb|EFT22952.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL072PA2]
gi|314984466|gb|EFT28558.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL005PA1]
gi|314986483|gb|EFT30575.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL005PA2]
gi|314990842|gb|EFT34933.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL005PA3]
gi|315081293|gb|EFT53269.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL078PA1]
gi|315083492|gb|EFT55468.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL027PA2]
gi|315087175|gb|EFT59151.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL002PA3]
gi|315089347|gb|EFT61323.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL072PA1]
gi|315095372|gb|EFT67348.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL038PA1]
gi|327328366|gb|EGE70128.1| putative methylase [Propionibacterium acnes HL096PA2]
gi|327329767|gb|EGE71523.1| putative methylase [Propionibacterium acnes HL096PA3]
gi|327444151|gb|EGE90805.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL043PA2]
gi|327444969|gb|EGE91623.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL043PA1]
gi|328760119|gb|EGF73698.1| putative methylase [Propionibacterium acnes HL099PA1]
Length = 170
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 9/77 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIAK 58
DLF G G + LE R + + + + + N T + +
Sbjct: 25 FCDLFAGSG--AVALEAA--SRGATTVVAVDRDRCACNVMKDNSRTTRLRIEVSSQTVTA 80
Query: 59 IKTQDIPDHDVLLAGFP 75
Q+ DV+ P
Sbjct: 81 FLAQNHRVFDVVWFDPP 97
>gi|313763625|gb|EFS34989.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL013PA1]
gi|313794020|gb|EFS42044.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL110PA1]
gi|313801406|gb|EFS42657.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL110PA2]
gi|313813573|gb|EFS51287.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL025PA1]
gi|313829577|gb|EFS67291.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL063PA2]
gi|313839873|gb|EFS77587.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL086PA1]
gi|314914629|gb|EFS78460.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL005PA4]
gi|314919259|gb|EFS83090.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL050PA1]
gi|314920831|gb|EFS84662.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL050PA3]
gi|314930510|gb|EFS94341.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL067PA1]
gi|314954332|gb|EFS98738.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL027PA1]
gi|314957390|gb|EFT01493.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL002PA1]
gi|314963626|gb|EFT07726.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL082PA1]
gi|314968542|gb|EFT12640.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL037PA1]
gi|315079481|gb|EFT51474.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL053PA2]
gi|315100514|gb|EFT72490.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL046PA1]
gi|315109052|gb|EFT81028.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL030PA2]
gi|327451960|gb|EGE98614.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL092PA1]
gi|327455004|gb|EGF01659.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL087PA3]
gi|327457708|gb|EGF04363.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL083PA2]
gi|328755162|gb|EGF68778.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL087PA1]
gi|328758059|gb|EGF71675.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL025PA2]
Length = 170
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 9/77 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIAK 58
DLF G G + LE R + + + + + N T + +
Sbjct: 25 FCDLFAGSG--AVALEAA--SRGATTVVAVDRDRCACNVMKDNSRTTRLRIEVSSQTVTA 80
Query: 59 IKTQDIPDHDVLLAGFP 75
Q+ DV+ P
Sbjct: 81 FLAQNHRVFDVVWFDPP 97
>gi|298505465|gb|ADI84188.1| DNA cytosine methyltransferase family protein [Geobacter
sulfurreducens KN400]
Length = 444
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 66 DHDVLLAGFPCQPFSQAG 83
D VL+ G PCQ +S G
Sbjct: 44 DRWVLIGGPPCQAYSIIG 61
>gi|289426506|ref|ZP_06428249.1| RNA methyltransferase, RsmD family [Propionibacterium acnes SK187]
gi|289153234|gb|EFD01952.1| RNA methyltransferase, RsmD family [Propionibacterium acnes SK187]
Length = 202
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 9/77 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIAK 58
DLF G G + LE R + + + + + N T + +
Sbjct: 57 FCDLFAGSG--AVALEAA--SRGATTVVAVDRDRCACNVMKDNSRTTRLRIEVSSQTVTA 112
Query: 59 IKTQDIPDHDVLLAGFP 75
Q+ DV+ P
Sbjct: 113 FLAQNHRVFDVVWFDPP 129
>gi|289428706|ref|ZP_06430389.1| RNA methyltransferase, RsmD family [Propionibacterium acnes J165]
gi|295131013|ref|YP_003581676.1| RNA methyltransferase, RsmD family [Propionibacterium acnes SK137]
gi|289158104|gb|EFD06324.1| RNA methyltransferase, RsmD family [Propionibacterium acnes J165]
gi|291377090|gb|ADE00945.1| RNA methyltransferase, RsmD family [Propionibacterium acnes SK137]
gi|332675891|gb|AEE72707.1| putative methyltransferase [Propionibacterium acnes 266]
Length = 202
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 9/77 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIAK 58
DLF G G + LE R + + + + + N T + +
Sbjct: 57 FCDLFAGSG--AVALEAA--SRGATTVVAVDRDRCACNVMKDNSRTTRLRIEVSSQTVTA 112
Query: 59 IKTQDIPDHDVLLAGFP 75
Q+ DV+ P
Sbjct: 113 FLAQNHRVFDVVWFDPP 129
>gi|170084587|ref|XP_001873517.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651069|gb|EDR15309.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1273
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 28/105 (26%), Gaps = 30/105 (28%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVK---------TYQANFPNTLIFGD 55
DLF G+G L + + EI P + K NT++
Sbjct: 750 LDLFGGVGAFSKGL--AEGSECLRVTHAVEIGPSAAKTLERNSPGTIVYNQCANTMLRYA 807
Query: 56 IAKIKTQDI-------------------PDHDVLLAGFPCQPFSQ 81
I + + V GFPCQ S
Sbjct: 808 IKSCEGHKPDPPVQLFDGKTPVPAPPKPGEIKVFTIGFPCQTHST 852
>gi|8248058|gb|AAF74028.1|AF202061_1 M.Hpy188I [Helicobacter pylori]
Length = 432
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
LKI D CG G ++ + +EINP ++ + F + + +K
Sbjct: 70 LKILDCCCGNGNF---FAYLETKTSLNNLYFNEINPKRIEHVKKYFGSNIHLSCKDFLKF 126
Query: 62 QDIPDHDVLLAGFP 75
+D+++A P
Sbjct: 127 DRATLYDLIVANPP 140
>gi|258574543|ref|XP_002541453.1| predicted protein [Uncinocarpus reesii 1704]
gi|237901719|gb|EEP76120.1| predicted protein [Uncinocarpus reesii 1704]
Length = 726
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQT--------FNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L LE + FS+EI P+ Q NF ++F
Sbjct: 140 LRVATMCSGTEAPLLALEMIADSFKRLYGKSFRMHHLFSAEIEPFKQSYIQRNFSPDILF 199
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFSQ 81
D++++ + + D+L+AGF C FSQ
Sbjct: 200 RDVSELVNNEATTAFGSVRTVPTNPDLLVAGFSCVDFSQ 238
>gi|50728974|ref|XP_416369.1| PREDICTED: hypothetical protein [Gallus gallus]
Length = 263
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 26/73 (35%), Gaps = 7/73 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP---YSVKTYQANFPNTLIFGDIAKIK 60
+ DL G G + + + +++I+P ++ T I I
Sbjct: 113 VLDLGSGCGATAIAAVMSGASQ----VLANDIDPIAGTAMILNCELNHVTPFPITIKNII 168
Query: 61 TQDIPDHDVLLAG 73
+ + D+++ G
Sbjct: 169 NSEAGNWDLIVLG 181
>gi|291531290|emb|CBK96875.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3]
Length = 425
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI 56
I +LF GIG L+ V + E + ++ Y A + + I
Sbjct: 6 NIVELFSGIGSQAKALKNLGYK--VNTLGTCEWDLHAFIAYDAIHSSPELPETI 57
>gi|302509424|ref|XP_003016672.1| hypothetical protein ARB_04964 [Arthroderma benhamiae CBS 112371]
gi|291180242|gb|EFE36027.1| hypothetical protein ARB_04964 [Arthroderma benhamiae CBS 112371]
Length = 230
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 22/81 (27%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + + ++ E + ++K + N + I
Sbjct: 76 IDAFAGAGGNTIAF---AKSNRWKRVYAIEKDRETLKCAKHNAELYGVADKITWFVGDCF 132
Query: 65 P----------DHDVLLAGFP 75
+ V+ P
Sbjct: 133 ELLQNQLKDLAPYSVIFGSPP 153
>gi|119193294|ref|XP_001247253.1| hypothetical protein CIMG_01024 [Coccidioides immitis RS]
Length = 2097
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQT--------FNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L L+ ++ FS+EI P+ Q NF ++F
Sbjct: 174 LRVASMCSGTEAPLLALDMIADSFKRLFGRSFHLHHLFSAEIEPFKQSYIQRNFSPAILF 233
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFSQ 81
D+ ++ + + D+L+AGF C FSQ
Sbjct: 234 RDVNELVNDEATTAFGSMRKVPTNPDLLVAGFSCVDFSQ 272
>gi|297160039|gb|ADI09751.1| hypothetical protein SBI_06631 [Streptomyces bingchenggensis
BCW-1]
Length = 227
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 22/75 (29%), Gaps = 11/75 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ D FC GG + + +I P + + F
Sbjct: 15 RLLDAFCCQGGASMGYHLA----GFDVVG-VDIAPQPRYPFTFVQAEAVAFIR------G 63
Query: 63 DIPDHDVLLAGFPCQ 77
+ D + A PCQ
Sbjct: 64 HGAEFDFIHASPPCQ 78
>gi|303288149|ref|XP_003063363.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226455195|gb|EEH52499.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 2005
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFN--------HRNVECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L L++ V+ FS EI P+ + NF ++F
Sbjct: 19 LRVATMCSGTESPLLALDKIGAATGQIYDAPLGVDHVFSCEIEPFKQAYIERNFAPPILF 78
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFSQ 81
DI ++ + D+L+AG C +S
Sbjct: 79 RDIRELDGDQATTAYGALVDVPGNVDMLVAGTSCVDYSN 117
>gi|303274456|ref|XP_003056548.1| hypothetical protein MICPUCDRAFT_55679 [Micromonas pusilla
CCMP1545]
gi|226462632|gb|EEH59924.1| hypothetical protein MICPUCDRAFT_55679 [Micromonas pusilla
CCMP1545]
Length = 322
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 19/68 (27%), Gaps = 6/68 (8%)
Query: 4 ITDLFCGIGGIRLDL-EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DLFCG GG + + +IN + + I +
Sbjct: 140 VLDLFCGAGGNTIAFARCAGAR-----VLACDINETRLDMADKVSLIYGVQHSINFVCND 194
Query: 63 DIPDHDVL 70
+ L
Sbjct: 195 ANAFLNCL 202
>gi|224095517|ref|XP_002197285.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 271
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 25/73 (34%), Gaps = 7/73 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINP---YSVKTYQANFPNTLIFGDIAKIK 60
+ DL G G + + + +++I+P ++ I I
Sbjct: 121 VLDLGSGCGATAIAAVMSGASQ----VLANDIDPIAGMAMILNCELNHLNPFPITIKNII 176
Query: 61 TQDIPDHDVLLAG 73
+ + D+++ G
Sbjct: 177 NSEAGNWDLIVLG 189
>gi|14520947|ref|NP_126422.1| hypothetical protein PAB0505 [Pyrococcus abyssi GE5]
gi|74547078|sp|Q9V0Q0|TRM5B_PYRAB RecName: Full=tRNA (guanine-N(1)-)-methyltransferase Trm5b;
AltName: Full=M1G-methyltransferase; AltName: Full=tRNA
[GM37] methyltransferase
gi|5458164|emb|CAB49653.1| Hypothetical protein, Met-10+ like protein [Pyrococcus abyssi GE5]
Length = 330
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKT 42
+ D+F G+G + L + E F+ +INP+++K
Sbjct: 186 VFDMFAGVGPFSILL-----AKKAELVFACDINPWAIKY 219
>gi|89093217|ref|ZP_01166167.1| Modification methylase HemK [Oceanospirillum sp. MED92]
gi|89082513|gb|EAR61735.1| Modification methylase HemK [Oceanospirillum sp. MED92]
Length = 309
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 28/78 (35%), Gaps = 8/78 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI--- 59
++ DL G G I + F V+ ++I+ ++ N + + I
Sbjct: 138 RVLDLCTGSGCIGIACAYAFAEAEVDL---ADISKDAIDVAHMNIEKHEMAERVHAIESD 194
Query: 60 --KTQDIPDHDVLLAGFP 75
+D++++ P
Sbjct: 195 LFCNLKGKKYDLIVSNPP 212
>gi|332157651|ref|YP_004422930.1| hypothetical protein PNA2_0007 [Pyrococcus sp. NA2]
gi|331033114|gb|AEC50926.1| hypothetical protein PNA2_0007 [Pyrococcus sp. NA2]
Length = 330
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI 56
+ D+F GIG + L + V F+S++NP++++ + N + I
Sbjct: 186 VFDMFAGIGPFSILL-----AKKVRLVFASDLNPWAIRYLEENMRLNKVKNVI 233
>gi|194227134|ref|XP_001916681.1| PREDICTED: similar to tRNA (cytosine-5-)-methyltransferase (DNA
(cytosine-5)-methyltransferase-like protein 2) (Dnmt2)
(DNA methyltransferase homolog HsaIIP) (DNA MTase
homolog HsaIIP) (M.HsaIIP) (PuMet) [Equus caballus]
Length = 435
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 18 LEQTFNHRNV--ECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK--TQDIPDHDVLLA 72
L + + + ++N + + Y+ NFP+T + I I D +++L
Sbjct: 60 LHHALKESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFNMILM 119
Query: 73 GFPCQPFSQAG 83
PCQPF++ G
Sbjct: 120 SPPCQPFTRIG 130
>gi|237731131|ref|ZP_04561612.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226906670|gb|EEH92588.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 665
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I D F G GG +E + + ++ ++ N P+TL + D+ +
Sbjct: 5 IVDNFAGGGGASTGIELA---IGRSVDIAINHDENAIAMHKTNHPDTLHYCESVFDVDPV 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ C+ FS+A
Sbjct: 62 AATGGNPVGLAWFSPDCRHFSKA 84
>gi|71893506|ref|YP_278952.1| putative DNA methylase [Mycoplasma hyopneumoniae J]
gi|71851633|gb|AAZ44241.1| putative DNA methylase [Mycoplasma hyopneumoniae J]
Length = 186
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 26/80 (32%), Gaps = 11/80 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-------VKTYQANFPNTLIFGD 55
K+ DLF G G + LE T R + ++E+N + K Y
Sbjct: 45 KVLDLFAGTG--AIGLEAT--SRGAKKVVATELNQKAYQNIVDFCKKYNIKNYQIFNKSA 100
Query: 56 IAKIKTQDIPDHDVLLAGFP 75
I I D + P
Sbjct: 101 IFLINDLKNKKFDFIFLDPP 120
>gi|320010240|gb|ADW05090.1| hypothetical protein Sfla_3672 [Streptomyces flavogriseus ATCC
33331]
Length = 228
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 11/79 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DL+C GG + E +I P + Y+ + + +
Sbjct: 16 RLLDLYCCQGGAAKGYAEA----GFEVTG-VDIAPQPLYPYRFVQADAVQYLL------A 64
Query: 63 DIPDHDVLLAGFPCQPFSQ 81
+ D + A PCQ +S+
Sbjct: 65 HGGEFDFVHASPPCQRYSR 83
>gi|327262625|ref|XP_003216124.1| PREDICTED: potential tRNA (adenine-N(1)-)-methyltransferase
catalytic subunit TRMT61B-like [Anolis carolinensis]
Length = 428
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 6/74 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY----SVKTYQANFPNTLIFGDIAK 58
K+ + G GG+ L L + + S EI + K YQ I +
Sbjct: 195 KVLEAGSGSGGMSLFLSRAVGPQG--HIISYEIRKDHHKLAKKNYQTWCDAWRIGHTVEW 252
Query: 59 IKTQDIPDHDVLLA 72
D + D+L A
Sbjct: 253 PDNVDFINADILTA 266
>gi|301609194|ref|XP_002934152.1| PREDICTED: trimethylguanosine synthase-like [Xenopus (Silurana)
tropicalis]
Length = 845
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D FCG+GG + + N + +I+P + + N + I I+
Sbjct: 691 VVDAFCGVGGNAIQFAKAGNR-----VIAVDIDPVKLDFARNNAEVYGVTDRIEFIRGDF 745
Query: 64 I-----PDHDVLLAGFP 75
+ D + P
Sbjct: 746 MLLAQDLKADAVFLSPP 762
>gi|302687500|ref|XP_003033430.1| hypothetical protein SCHCODRAFT_15473 [Schizophyllum commune H4-8]
gi|300107124|gb|EFI98527.1| hypothetical protein SCHCODRAFT_15473 [Schizophyllum commune H4-8]
Length = 2254
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDL--------EQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L L E VE FS EI P+ + NF L+F
Sbjct: 183 LRVATMCSGTESPLLALDLICTYVKELYDVEIGVEHVFSCEIEPFKQGYIERNFMPPLLF 242
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFSQ 81
D+ ++ + D D+L+AG C FS
Sbjct: 243 RDVCELGDAEAHTAFGALAPVPGDVDLLVAGTSCVDFSN 281
>gi|261334706|emb|CBH17700.1| proliferator-activated receptor-interacting protein (PRIP)
interacting protein (PIMT), putative,pseudogene
[Trypanosoma brucei gambiense DAL972]
Length = 251
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 11/77 (14%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT--- 61
DLFCG GG + L Q E + +I+P +++ + N + + +
Sbjct: 65 LDLFCGCGGDTVQLAQV-----FEKVIAVDIDPDAIEAAKKNAEVYGVSTRVTFLCADYR 119
Query: 62 ---QDIPDHDVLLAGFP 75
+ + + P
Sbjct: 120 TLKPENFSVNAVHCSPP 136
>gi|260432507|ref|ZP_05786478.1| C-5 cytosine-specific DNA methylase [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416335|gb|EEX09594.1| C-5 cytosine-specific DNA methylase [Silicibacter
lacuscaerulensis ITI-1157]
Length = 689
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 25/82 (30%), Gaps = 5/82 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I D F G GG +E + + + +I + +
Sbjct: 7 IIDSFAGGGGASTGIEIALGRSP--DVAINHSAAALALHKANHPYTLHLDSNIWDVDPLE 64
Query: 64 I---PDHDVLLAGFPCQPFSQA 82
I +L A C+ FS+A
Sbjct: 65 IANGRKVGLLWASPDCKHFSRA 86
>gi|19881451|ref|NP_612268.1| putative cytosine DNA methyltransferase [Infectious spleen and
kidney necrosis virus]
gi|19773656|gb|AAL98770.1|AF371960_46 putative cytosine DNA methyltransferase [infectious spleen and
kidney necrosis virus]
Length = 227
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 13/79 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ +LF G G + S +I +
Sbjct: 1 MRVLELFSGTG--SVGAVARQRRW---TVVSLDI--------CGSPDIKQDILTWDYAAA 47
Query: 62 QDIPDHDVLLAGFPCQPFS 80
D++ A FPC+ FS
Sbjct: 48 YPPGYFDIVWASFPCETFS 66
>gi|85706642|ref|ZP_01037734.1| modification methylase (Cytosine-specific methyltransferase
[Roseovarius sp. 217]
gi|85668700|gb|EAQ23569.1| modification methylase (Cytosine-specific methyltransferase
[Roseovarius sp. 217]
Length = 511
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 29/133 (21%), Gaps = 53/133 (39%)
Query: 4 ITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEINPYSVKTY------------QANFPN 49
I DLF G GG+ H S E + +T P
Sbjct: 7 IVDLFAGPGGLGEGFASLVEDGHAPFRIGISVEKEASAHRTLALRAFLREYQALHGVLPE 66
Query: 50 TLIFGDIAKIKTQDIPDHD---------------------------------------VL 70
I + D D +L
Sbjct: 67 PFIDFHAGLVPEPDWSAVDAEAWQLAIDEARALELGTETAARAIDGAIAKLRKNYDDTIL 126
Query: 71 LAGFPCQPFSQAG 83
+ G PCQ +S G
Sbjct: 127 IGGPPCQAYSLVG 139
>gi|313245968|emb|CBY34942.1| unnamed protein product [Oikopleura dioica]
Length = 394
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I D FCG+GG + T + +I+P ++ + N + I I
Sbjct: 194 IVDGFCGVGGNAIQFAFTCER-----VIAIDIDPEKIEMAKHNAAIYGVEDRIEFIVGDY 248
Query: 64 IP-----DHDVLLAGFP 75
DV+ P
Sbjct: 249 FKIIPSLRPDVVFLSPP 265
>gi|313224250|emb|CBY20039.1| unnamed protein product [Oikopleura dioica]
Length = 427
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I D FCG+GG + T + +I+P ++ + N + I I
Sbjct: 227 IVDGFCGVGGNAIQFAFTCER-----VIAIDIDPEKIEMAKHNAAIYGVEDRIEFIVGDY 281
Query: 64 IP-----DHDVLLAGFP 75
DV+ P
Sbjct: 282 FKIIPSLRPDVVFLSPP 298
>gi|303279905|ref|XP_003059245.1| TWY3 methyltransferase [Micromonas pusilla CCMP1545]
gi|226459081|gb|EEH56377.1| TWY3 methyltransferase [Micromonas pusilla CCMP1545]
Length = 1079
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY 38
+ DL+ GIG L Q H V ++ E NP
Sbjct: 489 TVVDLYAGIGYYTL---QLLKHAGVSKVYACEWNPN 521
>gi|54027887|ref|YP_122127.1| putative DNA methyltransferase [Nocardia farcinica IFM 10152]
gi|54019395|dbj|BAD60763.1| putative DNA methyltransferase [Nocardia farcinica IFM 10152]
Length = 541
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN--TLIFGDIAKIKTQDIP 65
F G GG L E +E ++ NP V+ + NFP+ L GD+ I +P
Sbjct: 14 FAGWGGDSLGWE---EVPGIELRLAANHNPVCVEVHTLNFPDAEHLPPGDVEAIDLATLP 70
Query: 66 DHDVLLAGFPCQPFSQA 82
++ A C ++ A
Sbjct: 71 YTELFWASPACPAWTDA 87
>gi|301596944|ref|ZP_07241952.1| DNA-cytosine methyltransferase [Acinetobacter baumannii AB059]
Length = 50
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV 27
+K+ D F G GG L Q +
Sbjct: 1 MKVIDFFSGCGGASEGLRQAGLDITI 26
>gi|121698875|ref|XP_001267835.1| C-5 cytosine-specific DNA methylase, putative [Aspergillus clavatus
NRRL 1]
gi|119395977|gb|EAW06409.1| C-5 cytosine-specific DNA methylase, putative [Aspergillus clavatus
NRRL 1]
Length = 2150
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQT--------FNHRNVECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L LE + + FS+EI P+ + NF +F
Sbjct: 113 LRVVTVCSGTESPLLALEMVQDNLRKHFRKNFDFRHLFSAEIVPFKQAYIERNFHPRFLF 172
Query: 54 GDIAKIK-----------TQDIPDHDVLLAGFPCQPFS 80
D+A++K + + D+L+AGF C FS
Sbjct: 173 RDVAQLKDRVAQTAYGSLEKIPKNADLLIAGFSCVDFS 210
>gi|45686029|ref|YP_003792.1| cytosine DNA methyltransferase [Ambystoma tigrinum virus]
gi|37722453|gb|AAP33198.1| cytosine DNA methyltransferase [Ambystoma tigrinum stebbensi
virus]
Length = 214
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 25/80 (31%), Gaps = 13/80 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++I DLF G + C A+ + + K
Sbjct: 1 MRILDLFSG---THSVPKACAQREGWSCV----------TVDLADSDYNVNVLEWDYTKD 47
Query: 62 QDIPDHDVLLAGFPCQPFSQ 81
+ DV+ A PC+ FS+
Sbjct: 48 LKPREFDVVWASPPCRYFSK 67
>gi|84686808|ref|ZP_01014695.1| DNA methylase, C-5 cytosine-specific family protein
[Maritimibacter alkaliphilus HTCC2654]
gi|84665239|gb|EAQ11718.1| DNA methylase, C-5 cytosine-specific family protein
[Rhodobacterales bacterium HTCC2654]
Length = 336
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 60 KTQDIPDHDVLLAGFPCQPFSQ 81
+ D++ G PCQ FS
Sbjct: 1 MGLKKGELDLVAGGPPCQGFSI 22
>gi|328708016|ref|XP_003243572.1| PREDICTED: hypothetical protein LOC100573483 isoform 2
[Acyrthosiphon pisum]
Length = 407
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D FCG GG + L +T + +I+P ++ + N + I +
Sbjct: 252 VLDPFCGAGGNIIQLAKTCKR-----VLACDIDPNKIRLARHNAEIYGVAHKIDFVVGDI 306
Query: 64 IPDH-----DVLLAGFP 75
+ DV+ P
Sbjct: 307 FQIYPKLRADVVFMSPP 323
>gi|261856758|ref|YP_003264041.1| Fmu (Sun) domain protein [Halothiobacillus neapolitanus c2]
gi|261837227|gb|ACX96994.1| Fmu (Sun) domain protein [Halothiobacillus neapolitanus c2]
Length = 430
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 7/31 (22%), Positives = 12/31 (38%), Gaps = 2/31 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSE 34
+ DL G GG L L + + + +
Sbjct: 242 VLDLCAGAGGKSLGLAEAVGEQG--HVLACD 270
>gi|282533168|gb|ADA82277.1| putative C-specific methylase [Escherichia phage K1G]
gi|282534219|gb|ADA82327.1| putative C-specific methylase [Escherichia phage K1H]
Length = 274
Score = 34.9 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 17/77 (22%), Gaps = 40/77 (51%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66
F GIGG L L D
Sbjct: 50 FFAGIGGWPLALRLAGVPE----------------------------------------D 69
Query: 67 HDVLLAGFPCQPFSQAG 83
+ PCQPFS AG
Sbjct: 70 APLWTGSPPCQPFSAAG 86
>gi|145294975|ref|YP_001137796.1| hypothetical protein cgR_0920 [Corynebacterium glutamicum R]
gi|140844895|dbj|BAF53894.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 331
Score = 34.9 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 31 FSSEINPYSVKTYQANFPNTLIF---------GDIAKIKTQDIPDHDVLLAGFPCQPFSQ 81
+ E +P + T++ NFP T+ F +I D ++ G PCQ FS
Sbjct: 3 AAVEFDPVHMATHEYNFPETVSFARDVQTLSGEEILVGTGLKGEDIHAVVGGAPCQGFSM 62
Query: 82 AG 83
G
Sbjct: 63 IG 64
>gi|126631930|gb|AAI34210.1| LOC100005455 protein [Danio rerio]
Length = 275
Score = 34.9 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 4/45 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF 47
K+ DL CG G C +++I+P + + N
Sbjct: 127 KVLDLGCGCG----ASAIAARLSGASCVVANDIDPIAAIATKMNC 167
>gi|332534140|ref|ZP_08409988.1| site-specific DNA methylase-like protein [Pseudoalteromonas
haloplanktis ANT/505]
gi|332036429|gb|EGI72898.1| site-specific DNA methylase-like protein [Pseudoalteromonas
haloplanktis ANT/505]
Length = 440
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 29/90 (32%), Gaps = 11/90 (12%)
Query: 1 MLK----ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANF----PNTLI 52
ML+ D + G GG + +E + +P ++ ++ N +
Sbjct: 1 MLRDNEISVDCYAGGGGASVGIEWATGRP---VDHAINHDPAAIAMHELNHPKTTHHCES 57
Query: 53 FGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
++ +K + C F+ A
Sbjct: 58 VWNVDPVKLCAGRTVGLAWFSPDCTHFTIA 87
>gi|291453091|ref|ZP_06592481.1| gp77 [Streptomyces albus J1074]
gi|291356040|gb|EFE82942.1| gp77 [Streptomyces albus J1074]
Length = 223
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 22/75 (29%), Gaps = 11/75 (14%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ DLFC GG E +I P Y +
Sbjct: 9 RLLDLFCCQGGAAKGYADA----GFEVTG-VDIRPQPRYPYTFVQAEAVA------FVLA 57
Query: 63 DIPDHDVLLAGFPCQ 77
+ DV+ A PCQ
Sbjct: 58 HGAEFDVIHASPPCQ 72
>gi|294655833|ref|XP_458027.2| DEHA2C07986p [Debaryomyces hansenii CBS767]
gi|199430641|emb|CAG86090.2| DEHA2C07986p [Debaryomyces hansenii]
Length = 281
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 27/77 (35%), Gaps = 5/77 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ D+ CG GG + F S +INP ++K N + I
Sbjct: 83 KVLDICCGGGGNTIQFANYFPSVG-----SIDINPSNMKCTLHNARVYGVEDRIWSKVGD 137
Query: 63 DIPDHDVLLAGFPCQPF 79
VL G P Q +
Sbjct: 138 WNQFSSVLADGSPNQSW 154
>gi|33416520|gb|AAH55850.1| TRNA methyltranferase 12 homolog (S. cerevisiae) [Mus musculus]
Length = 446
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 19/67 (28%), Gaps = 5/67 (7%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS--VKTYQANFPNTLIFGDIAKIKTQ 62
DL+ GIG L H + E NP++ I +
Sbjct: 229 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDNR 285
Query: 63 DIPDHDV 69
+ D+
Sbjct: 286 KLKLSDI 292
>gi|118150645|ref|NP_080918.2| tRNA wybutosine-synthesizing protein 2 homolog [Mus musculus]
gi|81895986|sp|Q8BG71|TYW2_MOUSE RecName: Full=tRNA wybutosine-synthesizing protein 2 homolog;
Short=tRNA-yW-synthesizing protein 2; AltName:
Full=Alpha-amino-alpha-carboxypropyl transferase TYW2
gi|26327311|dbj|BAC27399.1| unnamed protein product [Mus musculus]
gi|26345714|dbj|BAC36508.1| unnamed protein product [Mus musculus]
gi|26347897|dbj|BAC37597.1| unnamed protein product [Mus musculus]
gi|148697363|gb|EDL29310.1| mCG51593 [Mus musculus]
Length = 446
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 19/67 (28%), Gaps = 5/67 (7%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS--VKTYQANFPNTLIFGDIAKIKTQ 62
DL+ GIG L H + E NP++ I +
Sbjct: 229 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDNR 285
Query: 63 DIPDHDV 69
+ D+
Sbjct: 286 KLKLSDI 292
>gi|12859716|dbj|BAB31750.1| unnamed protein product [Mus musculus]
Length = 423
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 19/67 (28%), Gaps = 5/67 (7%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS--VKTYQANFPNTLIFGDIAKIKTQ 62
DL+ GIG L H + E NP++ I +
Sbjct: 229 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDNR 285
Query: 63 DIPDHDV 69
+ D+
Sbjct: 286 KLKLSDI 292
>gi|313244000|emb|CBY14873.1| unnamed protein product [Oikopleura dioica]
Length = 552
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 28 ECFFSSEINPYSVKTY---QANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+ + +IN + Y + +I DI + ++ L PCQPF++ G
Sbjct: 179 QVLSAMDINNNATSCYKLNHMSMEKDVINTDINAAPWEQTSGYNTLAMSPPCQPFTRNG 237
>gi|145301342|ref|YP_001144182.1| C-5 cytosine-specific DNA methylase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142856119|gb|ABO92434.1| C-5 cytosine-specific DNA methylase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 541
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 9/91 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNV--ECFFSSEINPY------SVKTYQANFPNTLIF 53
L + LF G G + + F + + E+ + + + I
Sbjct: 124 LSVCSLFHGGGVLDKAIHAGFKRSGIASSIAVAVEMEGSYLDSSLANNPELWDQNSIAIE 183
Query: 54 GDIAKIKTQDIPDH-DVLLAGFPCQPFSQAG 83
I + P D+L+ G P S++G
Sbjct: 184 SPIQAVNLSRQPTQVDLLIGGIPVTGASKSG 214
>gi|271501842|ref|YP_003334868.1| TrmA family RNA methyltransferase [Dickeya dadantii Ech586]
gi|270345397|gb|ACZ78162.1| RNA methyltransferase, TrmA family [Dickeya dadantii Ech586]
Length = 444
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 3 KITDLFCGIGGIRLDL-EQTFNHRNVECFFS 32
++ DLFCG+G L + + VE +
Sbjct: 295 RVLDLFCGMGNFTLPMAQHAGRVVGVEGVAA 325
>gi|326532950|dbj|BAJ89320.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L++ ++ G+GG + L + +C S E + + K + + T G + ++
Sbjct: 388 LRVLSIYSGVGGAEVALHRLGIPL--KCVVSIEESDVNRKILKRWWAKTEQSGVLRQLPG 445
Query: 62 QDIPDHDVL------LAGF 74
DVL GF
Sbjct: 446 IWKLKTDVLEDLFKEFGGF 464
>gi|225734442|gb|ACO25210.1| cytosine DNA methyltransferase [Epizootic haematopoietic necrosis
virus]
Length = 214
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 13/80 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++I DLF G + C + ++ A+ + + K
Sbjct: 1 MRILDLFSG---THSVPKACAQREGWSCV-TVDL---------ADSDYNVDVLEWDYTKD 47
Query: 62 QDIPDHDVLLAGFPCQPFSQ 81
+ DV+ A PC+ FS+
Sbjct: 48 LKPREFDVVWASPPCRYFSK 67
>gi|253999374|ref|YP_003051437.1| C-5 cytosine-specific DNA methylase [Methylovorus sp. SIP3-4]
gi|253986053|gb|ACT50910.1| C-5 cytosine-specific DNA methylase [Methylovorus sp. SIP3-4]
Length = 606
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 23/82 (28%), Gaps = 5/82 (6%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ- 62
I DLF G GG ++ + + + D+ ++ +
Sbjct: 22 IVDLFAGGGGKSEGIKIASGRNP--DIAINHNDDALSMHRINHPDTRHFVADVFEVDPRT 79
Query: 63 --DIPDHDVLLAGFPCQPFSQA 82
L A C SQA
Sbjct: 80 VTQGRPVGHLHASPDCTHHSQA 101
>gi|317033838|ref|XP_001395547.2| C-5 cytosine-specific DNA methylase [Aspergillus niger CBS 513.88]
Length = 2044
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--------VECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L LE H + FS+EI+P Q NF +F
Sbjct: 107 LRVATVCSGTESPILALEMVQKHLREQFNMNFEIRHIFSAEIDPLRQAYIQRNFRPPRLF 166
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFSQ 81
D+ ++ + + D+L+AGF C FS
Sbjct: 167 RDVKELNHRVAQTAYGSLEKVPKNPDILVAGFSCVDFSN 205
>gi|242092256|ref|XP_002436618.1| hypothetical protein SORBIDRAFT_10g005915 [Sorghum bicolor]
gi|241914841|gb|EER87985.1| hypothetical protein SORBIDRAFT_10g005915 [Sorghum bicolor]
Length = 279
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 23/77 (29%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D F G GG + + + EI+P V+ N + I I
Sbjct: 145 VVDAFAGCGGNSIQFAARGCY-----VVAVEIDPRKVELAAHNARVYGVEDRIEFIVGDF 199
Query: 64 IP-----DHDVLLAGFP 75
D++ P
Sbjct: 200 FRLAPLLKADLVFLSPP 216
>gi|134080265|emb|CAK97168.1| unnamed protein product [Aspergillus niger]
Length = 2138
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--------VECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L LE H + FS+EI+P Q NF +F
Sbjct: 107 LRVATVCSGTESPILALEMVQKHLREQFNMNFEIRHIFSAEIDPLRQAYIQRNFRPPRLF 166
Query: 54 GDIAKIKTQD-----------IPDHDVLLAGFPCQPFSQ 81
D+ ++ + + D+L+AGF C FS
Sbjct: 167 RDVKELNHRVAQTAYGSLEKVPKNPDILVAGFSCVDFSN 205
>gi|282547320|gb|ADA82377.1| putative C-specific methylase [Escherichia phage K1ind1]
Length = 274
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 17/77 (22%), Gaps = 40/77 (51%)
Query: 7 LFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPD 66
F GIGG L L D
Sbjct: 50 FFAGIGGWPLALRLAGVPE----------------------------------------D 69
Query: 67 HDVLLAGFPCQPFSQAG 83
+ PCQPFS AG
Sbjct: 70 APLWTGSPPCQPFSAAG 86
>gi|328545736|ref|YP_004305845.1| phage DNA methyltransferase [polymorphum gilvum SL003B-26A1]
gi|326415476|gb|ADZ72539.1| Phage DNA methyltransferase [Polymorphum gilvum SL003B-26A1]
Length = 329
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 69 VLLAGFPCQPFSQAG 83
V PCQPFSQAG
Sbjct: 73 VWTGSPPCQPFSQAG 87
>gi|312601111|gb|ADQ90366.1| DNA methylase [Mycoplasma hyopneumoniae 168]
Length = 162
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 26/80 (32%), Gaps = 11/80 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-------VKTYQANFPNTLIFGD 55
K+ DLF G G + LE T R + ++E+N + K Y
Sbjct: 21 KVLDLFAGTG--AIGLEAT--SRGAKKVIATELNQKAYQNIVDFCKKYNIKNYQIFNKSA 76
Query: 56 IAKIKTQDIPDHDVLLAGFP 75
I I D + P
Sbjct: 77 IFLINDLKNKKFDFIFLDPP 96
>gi|251778642|ref|ZP_04821562.1| methyl transferase [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243082957|gb|EES48847.1| methyl transferase [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 586
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 41 KTYQANFPNTLIFGDIAKIKTQDI-PDHDVLLAGFPCQPFSQAG 83
+ + +++ I D+ + G PCQ FS G
Sbjct: 223 YFANYDITDERFHWNVSFIDGAQYTNKVDLFVGGSPCQSFSMVG 266
>gi|15644412|ref|NP_229464.1| hypothetical protein TM1664 [Thermotoga maritima MSB8]
gi|4982239|gb|AAD36731.1|AE001808_6 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 210
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK---I 59
K+ DL CG G I + L++ + + S+IN +V+ + N + + DI
Sbjct: 63 KVLDLGCGYGVIGIVLKKEYPDLE---VYMSDINKRAVEFAKINAKDHNVEVDIRWGNLY 119
Query: 60 KTQDIPDHDVLLAGFP 75
+ + D+++ P
Sbjct: 120 EPWEDMKFDMIVCNPP 135
>gi|260840790|ref|XP_002613805.1| hypothetical protein BRAFLDRAFT_124175 [Branchiostoma floridae]
gi|229299195|gb|EEN69814.1| hypothetical protein BRAFLDRAFT_124175 [Branchiostoma floridae]
Length = 1421
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 19/65 (29%), Gaps = 3/65 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DL+ GIG L + E NP +V+ Q N +
Sbjct: 235 TVVDLYAGIGYFTLPFLVHGKAAE---VHACEWNPAAVEALQKNLQINKVQDRCTVHHGD 291
Query: 63 DIPDH 67
+
Sbjct: 292 NRQVC 296
>gi|49237381|ref|YP_031662.1| cytosine DNA methyltransferase [Frog virus 3]
gi|228861298|ref|YP_002854321.1| cytosine DNA methyltransferase [Soft-shelled turtle iridovirus]
gi|558473|gb|AAA86959.1| cytosine DNA methyltransferase [Frog virus 3]
gi|47060199|gb|AAT09743.1| cytosine DNA methyltransferase [Frog virus 3]
gi|194307578|gb|ACF42308.1| cytosine DNA methyltransferase [Soft-shelled turtle iridovirus]
Length = 214
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 25/80 (31%), Gaps = 13/80 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++I DLF G + C A+ + + K
Sbjct: 1 MRILDLFSG---THSVPKACAQREGWSCV----------TVDLADSDYNVDVLEWDYTKD 47
Query: 62 QDIPDHDVLLAGFPCQPFSQ 81
+ DV+ A PC+ FS+
Sbjct: 48 LKPREFDVVWASPPCRYFSK 67
>gi|218506488|ref|ZP_03504366.1| C-5 cytosine-specific DNA methylase [Rhizobium etli Brasil 5]
Length = 185
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 5/54 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD 55
+ + LF G+GG LE + +P ++ ++ P+T
Sbjct: 113 MTVV-LFAGMGGGCDGLEDA----GFHVHLAVNHDPLAIAMHEKRHPHTKHLRC 161
>gi|88602122|ref|YP_502300.1| hypothetical protein Mhun_0829 [Methanospirillum hungatei JF-1]
gi|88187584|gb|ABD40581.1| methyltransferase [Methanospirillum hungatei JF-1]
Length = 288
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 26/75 (34%), Gaps = 9/75 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I D+F GIG L + + + EINP +V + N + I
Sbjct: 152 ICDMFAGIGYFTLPMAKAG---GF--IHALEINPDAVHYLEKNVRENALDSRIRITMGDC 206
Query: 64 IP----DHDVLLAGF 74
+D + G+
Sbjct: 207 RKTITGTYDRIHMGY 221
>gi|70950935|ref|XP_744748.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524830|emb|CAH77196.1| hypothetical protein PC000060.02.0 [Plasmodium chabaudi chabaudi]
Length = 521
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY 38
+ DLFCG G L L + + +++ +IN +
Sbjct: 337 NVVDLFCGAGYFTLPLLKFVGDSKINNYYAFDINRH 372
>gi|332672853|gb|AEE69670.1| possible DNA (cytosine-5-)-methyltransferase [Helicobacter pylori
83]
Length = 281
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 69 VLLAGFPCQPFSQAG 83
+++ G PCQ FS G
Sbjct: 1 MIIGGPPCQGFSNKG 15
>gi|317181351|dbj|BAJ59135.1| cytosine specific DNA methyltransferase [Helicobacter pylori F57]
Length = 281
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 69 VLLAGFPCQPFSQAG 83
+++ G PCQ FS G
Sbjct: 1 MIIGGPPCQGFSNKG 15
>gi|317179856|dbj|BAJ57642.1| cytosine specific DNA methyltransferase [Helicobacter pylori F32]
Length = 281
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 69 VLLAGFPCQPFSQAG 83
+++ G PCQ FS G
Sbjct: 1 MIIGGPPCQGFSNKG 15
>gi|308182232|ref|YP_003926359.1| cytosine specific DNA methyltransferase [Helicobacter pylori
PeCan4]
gi|308064417|gb|ADO06309.1| cytosine specific DNA methyltransferase [Helicobacter pylori
PeCan4]
Length = 281
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 69 VLLAGFPCQPFSQAG 83
+++ G PCQ FS G
Sbjct: 1 MIIGGPPCQGFSNKG 15
>gi|315586055|gb|ADU40436.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
Length = 281
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 69 VLLAGFPCQPFSQAG 83
+++ G PCQ FS G
Sbjct: 1 MIIGGPPCQGFSNKG 15
>gi|208434021|ref|YP_002265687.1| cytosine specific DNA methyltransferase (putative type II)
[Helicobacter pylori G27]
gi|208431950|gb|ACI26821.1| cytosine specific DNA methyltransferase (putative type II)
[Helicobacter pylori G27]
Length = 281
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 69 VLLAGFPCQPFSQAG 83
+++ G PCQ FS G
Sbjct: 1 MIIGGPPCQGFSNKG 15
>gi|115443362|ref|XP_001218488.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114188357|gb|EAU30057.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 2106
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 19/98 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--------VECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L LE + FS+EI P+ + NF IF
Sbjct: 112 LRVVTVCSGTESPLLALEMVQENLRTHFERNFEFRHLFSAEIVPFKQAYIERNFHPPFIF 171
Query: 54 GDIAKIK-----------TQDIPDHDVLLAGFPCQPFS 80
D+A++K + + D+L+AGF C FS
Sbjct: 172 RDVAELKDRVAQTAYGSLEKIPKNADILIAGFSCVDFS 209
>gi|154488616|ref|ZP_02029465.1| hypothetical protein BIFADO_01923 [Bifidobacterium adolescentis
L2-32]
gi|154082753|gb|EDN81798.1| hypothetical protein BIFADO_01923 [Bifidobacterium adolescentis
L2-32]
Length = 505
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 14/40 (35%), Gaps = 3/40 (7%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRN---VECFFSSEINPYSV 40
+ DLF G GG+ + + S E+ +
Sbjct: 8 VIDLFAGPGGMSEGFSSLRDENDEPVFRSIMSIEMERTAH 47
Score = 34.1 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 69 VLLAGFPCQPFSQAG 83
VL+ G PCQ +S G
Sbjct: 128 VLIGGPPCQAYSLVG 142
>gi|257052094|ref|YP_003129927.1| methyltransferase [Halorhabdus utahensis DSM 12940]
gi|256690857|gb|ACV11194.1| methyltransferase [Halorhabdus utahensis DSM 12940]
Length = 365
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 22/68 (32%), Gaps = 5/68 (7%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ D+F GIG L + + + E NP + + N + + +
Sbjct: 219 TVLDMFAGIGYFTLPMARADAD-----VIAVERNPTAFQYLLENARLNDVTDRVQPYRAD 273
Query: 63 DIPDHDVL 70
D +
Sbjct: 274 CRDVVDGV 281
>gi|115911664|ref|XP_798254.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
purpuratus]
Length = 334
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
+ DL+ GIG L H + ++ E NP++
Sbjct: 30 TVVDLYAGIGYFTLPY---LVHAKAKLLYACEWNPHA 63
>gi|261866895|ref|YP_003254817.1| phosphatidylserine synthase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261412227|gb|ACX81598.1| phosphatidylserine synthase [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 232
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 25/79 (31%), Gaps = 9/79 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-------ANFPNTLIFGDI 56
I DL G G + L + EI+P + + Q + +I
Sbjct: 38 ILDL--GCGSGLIALMLAQRSSAESRICAVEIDPAAAQQAQENVSASPWKDKIQVYQQNI 95
Query: 57 AKIKTQDIPDHDVLLAGFP 75
Q D+++A P
Sbjct: 96 ETFCAQSKHAFDLIVANPP 114
>gi|115946840|ref|XP_001180639.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 326
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
+ DL+ GIG L H + ++ E NP++
Sbjct: 22 TVVDLYAGIGYFTLPY---LVHAKAKLLYACEWNPHA 55
>gi|307202841|gb|EFN82101.1| UPF0516 protein [Harpegnathos saltator]
Length = 224
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 3/66 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+I DL G G + + +++IN + N +++
Sbjct: 75 RILDLGAGCGATAIA---AKLIGPWQQVVANDINEVACVAVAMNAVLNDADIEVSWENLL 131
Query: 63 DIPDHD 68
+ P D
Sbjct: 132 ERPPED 137
>gi|297816932|ref|XP_002876349.1| hypothetical protein ARALYDRAFT_907051 [Arabidopsis lyrata subsp.
lyrata]
gi|297322187|gb|EFH52608.1| hypothetical protein ARALYDRAFT_907051 [Arabidopsis lyrata subsp.
lyrata]
Length = 457
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 5/76 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ D+F GIG + +++++NP SV+ + N + I
Sbjct: 208 TVCDMFAGIGPFAI---PAAQKGCF--VYANDLNPDSVRYLKINAKFNKVDDLICVHNMD 262
Query: 63 DIPDHDVLLAGFPCQP 78
L+A C+
Sbjct: 263 ARKFFSQLMAVSTCEG 278
>gi|221128435|ref|XP_002154469.1| PREDICTED: similar to Trimethylguanosine synthase homolog [Hydra
magnipapillata]
Length = 1198
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 27/77 (35%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I D FCG+GG + T E + +INP ++ + N + I I
Sbjct: 731 IIDAFCGVGGNAIQFAYTC-----EHVIAIDINPTRLECARHNAVVYGVENRITFILGDF 785
Query: 64 I-----PDHDVLLAGFP 75
DV+ P
Sbjct: 786 FLLAPSLKADVVFLSPP 802
>gi|327446453|gb|EGE93107.1| RNA methyltransferase, RsmD family [Propionibacterium acnes
HL013PA2]
Length = 170
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 23/77 (29%), Gaps = 9/77 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIF-----GDIAK 58
DLF G G + LE R + + + + + N T + +
Sbjct: 25 FCDLFAGSG--AVALEAA--SRGATTVVAVDRDRCACNVMKDNSRTTRLRIEVSSQTVTA 80
Query: 59 IKTQDIPDHDVLLAGFP 75
Q DV+ P
Sbjct: 81 FLAQSHRVFDVVWFDPP 97
>gi|134079238|emb|CAK40721.1| unnamed protein product [Aspergillus niger]
Length = 266
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 25/81 (30%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + + + ++ E NP ++ + N + I +
Sbjct: 106 VDAFAGAGGNSIAFALSGR---WKRVYAIEKNPAVLQCAKHNAKIYGVADKITWFEGDCF 162
Query: 65 P----------DHDVLLAGFP 75
+ V+ A P
Sbjct: 163 EIIKNQLKDLAPYSVVFASPP 183
>gi|326673745|ref|XP_003199977.1| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog [Danio
rerio]
Length = 408
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
+ DL+ GIG L H N + E NP +
Sbjct: 220 TVVDLYAGIGYFTLPY---LVHANAAHVHACEWNPDA 253
>gi|225155383|ref|ZP_03723875.1| C-5 cytosine-specific DNA methylase [Opitutaceae bacterium TAV2]
gi|224803839|gb|EEG22070.1| C-5 cytosine-specific DNA methylase [Opitutaceae bacterium TAV2]
Length = 287
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Query: 34 EINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
+I+ Y+ + A + +A T V PCQPFS AG
Sbjct: 41 DIDGYTQCHFFAGVGGWPLASQLAGWPT----TRPVWTGSCPCQPFSVAG 86
>gi|149907916|ref|ZP_01896584.1| putative adenine-specific methylase [Moritella sp. PE36]
gi|149808922|gb|EDM68853.1| putative adenine-specific methylase [Moritella sp. PE36]
Length = 309
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++I D+ G G I + L F ++ + +I +++ + N + + I++
Sbjct: 134 MRILDMCTGSGCIAIALSHAFPDSEID---AVDIEHGAIEVAEINIQEHGVENQVTPIQS 190
Query: 62 Q-----DIPDHDVLLAGFP 75
+ +D++++ P
Sbjct: 191 DLFSNLEGLRYDMIVSNPP 209
>gi|116004541|ref|NP_001070632.1| tRNA wybutosine-synthesizing protein 2 homolog [Danio rerio]
gi|123905829|sp|Q0P466|TYW2_DANRE RecName: Full=tRNA wybutosine-synthesizing protein 2 homolog;
Short=tRNA-yW-synthesizing protein 2; AltName:
Full=Alpha-amino-alpha-carboxypropyl transferase TYW2
gi|112419413|gb|AAI22255.1| Zgc:153361 [Danio rerio]
Length = 408
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
+ DL+ GIG L H N + E NP +
Sbjct: 220 TVVDLYAGIGYFTLPY---LVHANAAHVHACEWNPDA 253
>gi|325137454|gb|EGC60041.1| cytosine-specific methyltransferase HgiDII [Neisseria
meningitidis ES14902]
Length = 334
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 13/77 (16%)
Query: 14 IRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT---------QDI 64
+ ++ ++ + P +TY+AN I D+ +++ +
Sbjct: 1 MSYGMQSA----GIQVLAGIDYEPSCKETYEANINAKFIQADVFELQPETLEKELGLKKN 56
Query: 65 PDHDVLLAGFPCQPFSQ 81
D +L+ PCQ +S
Sbjct: 57 DDDLILIGCSPCQYWSV 73
>gi|307103760|gb|EFN52018.1| hypothetical protein CHLNCDRAFT_139582 [Chlorella variabilis]
Length = 632
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 33/103 (32%), Gaps = 33/103 (32%)
Query: 5 TDLFCG-----IGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
DLF G G +R + V+ +++ E++P + + A +
Sbjct: 171 VDLFAGLSTAVCGALRAGMR-------VDRYYAVEVSPSVRRMADHHLRRLQARHGPAAL 223
Query: 60 KT---------------------QDIPDHDVLLAGFPCQPFSQ 81
+ D+L +GFPCQ S+
Sbjct: 224 PDSALASAHSALPQDSGGSRLGRMSLGRIDLLCSGFPCQDLSR 266
>gi|296242730|ref|YP_003650217.1| hypothetical protein Tagg_0995 [Thermosphaera aggregans DSM 11486]
gi|296095314|gb|ADG91265.1| protein of unknown function Met10 [Thermosphaera aggregans DSM
11486]
Length = 327
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
+ DLF GIGG L + ++++NP +
Sbjct: 178 VVDLFSGIGGFPLHIASLKTAL----VLANDLNPTAH 210
>gi|194215085|ref|XP_001916357.1| PREDICTED: similar to TRNA methyltransferase 12 homolog (S.
cerevisiae) [Equus caballus]
Length = 439
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
DL+ GIG L H + E NP++V + N + +
Sbjct: 230 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHAVVALRNNLEINGVAHQCQIHFGDNR 286
Query: 65 P 65
Sbjct: 287 K 287
>gi|134117273|ref|XP_772863.1| hypothetical protein CNBK2340 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255481|gb|EAL18216.1| hypothetical protein CNBK2340 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 2291
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 19/99 (19%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN--------VECFFSSEINPYSVKTYQANFPNTLIF 53
L++ + G L L E FS EI P+ + NF ++F
Sbjct: 324 LRVATMCSGTESPLLALNMIAKAIKAQHGLTLAFEHVFSCEIEPFKQAYIERNFAPPVLF 383
Query: 54 GDIAKI-----------KTQDIPDHDVLLAGFPCQPFSQ 81
D+ ++ + D D+L+AG C +S
Sbjct: 384 RDVTELGKKRAHTAYGSMVEVPGDVDILIAGTSCVDYSN 422
>gi|332558666|ref|ZP_08412988.1| DNA-cytosine methyltransferase [Rhodobacter sphaeroides WS8N]
gi|332276378|gb|EGJ21693.1| DNA-cytosine methyltransferase [Rhodobacter sphaeroides WS8N]
Length = 510
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 30/133 (22%), Gaps = 53/133 (39%)
Query: 4 ITDLFCGIGGIRLDLEQTFN--HRNVECFFSSEIN-----------------------PY 38
I DLF G GG+ H S E P
Sbjct: 7 IVDLFAGPGGLGEGFASLARDGHAPFRIGISVEKEASAHRTLTLRAFLREYMALHGTLPD 66
Query: 39 SVKTYQANFPNTLIFGDI---------------------------AKIKTQDIPDHD-VL 70
+ A + + I++ D +L
Sbjct: 67 QFFEFHAGLETEPDWSAVDAQAWKHAVDEARALELGTEVAASAIDRAIESLKAGYDDTIL 126
Query: 71 LAGFPCQPFSQAG 83
+ G PCQ +S G
Sbjct: 127 IGGPPCQAYSLVG 139
>gi|307191267|gb|EFN74914.1| Methyltransferase-like protein 5 [Camponotus floridanus]
Length = 315
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 25/78 (32%), Gaps = 10/78 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------A 57
+ DL G G + L + EI+ ++ N + +F +I
Sbjct: 159 VADLGSGCGILSLGAKMLGAQY----VVGFEIDSDAIDIQYRNCTDIELFVEIVQCNVLQ 214
Query: 58 KIKTQDIPDHDVLLAGFP 75
+ + D ++ P
Sbjct: 215 YLPGKFEKCFDTVIMNPP 232
>gi|295646363|gb|ADG23067.1| DNA (cytosine-5)-methyltransferase 2 [Gadus morhua]
Length = 139
Score = 34.5 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 31 FSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIPD--HDVLLAGFPCQPFSQAG 83
+ ++N + + Y+ NFP+T I I ++ D++L PCQPF++ G
Sbjct: 1 AAIDVNTTANEIYRHNFPDTPLWPKTIEGISLEEFNKLSFDMILMSPPCQPFTRIG 56
>gi|221101377|ref|XP_002169665.1| PREDICTED: similar to trimethylguanosine synthase homolog, partial
[Hydra magnipapillata]
Length = 198
Score = 34.5 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 26/77 (33%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D FCGIGG + + +I+P ++ + N + I+ I
Sbjct: 39 VIDAFCGIGGNTIQF-----ALKSNHVIAIDIDPVRLECARQNAAIYGVENRISFILGDF 93
Query: 64 IP-----DHDVLLAGFP 75
DV+ P
Sbjct: 94 FVLAPSLKADVVFLSPP 110
>gi|147903096|ref|NP_001079673.1| tRNA aspartic acid methyltransferase 1 [Xenopus laevis]
gi|111185513|gb|AAH46854.2| MGC53207 protein [Xenopus laevis]
Length = 382
Score = 34.5 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 36 NPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
N + I +K D D++L PCQPF++ G
Sbjct: 25 NKVYKYNFPHTPLWPKTIEGIT-LKELDALSFDMILMSPPCQPFTRIG 71
>gi|302655758|ref|XP_003019663.1| hypothetical protein TRV_06292 [Trichophyton verrucosum HKI 0517]
gi|291183400|gb|EFE39018.1| hypothetical protein TRV_06292 [Trichophyton verrucosum HKI 0517]
Length = 230
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 23/81 (28%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + + + ++ E + ++K + N + I
Sbjct: 76 IDAFAGAGGNTIAFAMSNR---WKRVYAIEKDLETLKCAKHNAELYGVADKITWFVGDCF 132
Query: 65 P----------DHDVLLAGFP 75
+ V+ P
Sbjct: 133 ELLQNQLKDLAPYSVIFGSPP 153
>gi|119471910|ref|ZP_01614218.1| 23S rRNA (uracil-5)-methyltransferase [Alteromonadales bacterium
TW-7]
gi|119445283|gb|EAW26573.1| 23S rRNA (uracil-5)-methyltransferase [Alteromonadales bacterium
TW-7]
Length = 441
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Query: 3 KITDLFCGIGGIRLDL-EQTFNHRNVECFFS----SEINPYSVKTYQANFPNTLIFGDIA 57
I DLFCGIG L L +Q +E S +E N + A F + I
Sbjct: 298 NILDLFCGIGNFSLVLAKQAKTVIGIEGVASAVAMAEQNAQTNSISNAQFHCFDLTQKIQ 357
Query: 58 KIKTQDIPDHDVLLAGF 74
+ + + DVL+
Sbjct: 358 NAQWFN-KNLDVLVLDP 373
>gi|302690426|ref|XP_003034892.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8]
gi|300108588|gb|EFI99989.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8]
Length = 1412
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 68 DVLLAGFPCQPFSQA 82
D + G PCQ FS+A
Sbjct: 1015 DFVFGGPPCQSFSKA 1029
>gi|54020103|ref|YP_115741.1| hypothetical protein mhp228 [Mycoplasma hyopneumoniae 232]
gi|72080493|ref|YP_287551.1| DNA methylase [Mycoplasma hyopneumoniae 7448]
gi|53987276|gb|AAV27477.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232]
gi|71913617|gb|AAZ53528.1| DNA methylase [Mycoplasma hyopneumoniae 7448]
Length = 186
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 26/80 (32%), Gaps = 11/80 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS-------VKTYQANFPNTLIFGD 55
K+ DLF G G + LE T R + ++E+N + K Y
Sbjct: 45 KVLDLFAGTG--AIGLEAT--SRGAKKVIATELNQKAYQNIVDFCKKYNIKNYQIFNKSA 100
Query: 56 IAKIKTQDIPDHDVLLAGFP 75
I I D + P
Sbjct: 101 IFLINDLKNKKFDFIFLDPP 120
>gi|322786157|gb|EFZ12762.1| hypothetical protein SINV_00682 [Solenopsis invicta]
Length = 280
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 8/68 (11%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ DL G G + + +++I+ + N + +++
Sbjct: 138 IRMLDLGAGCGATAIA---AKLMNGMCKIVANDISKVACVAIAMNAILNNVDIEVSWENL 194
Query: 62 QDIPDHDV 69
P D+
Sbjct: 195 LQKPLEDL 202
>gi|126653150|ref|ZP_01725274.1| type II DNA modification methyltransferase Spn5252IP [Bacillus
sp. B14905]
gi|126590066|gb|EAZ84192.1| type II DNA modification methyltransferase Spn5252IP [Bacillus
sp. B14905]
Length = 48
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 65 PDHDVLLAGFPCQPFSQAG 83
D + GFPCQ FS AG
Sbjct: 19 GKVDNICGGFPCQAFSVAG 37
>gi|7572910|emb|CAB87411.1| putative protein [Arabidopsis thaliana]
Length = 447
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 5/76 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ D+F GIG + +++++NP SV+ + N + I
Sbjct: 198 TVCDMFAGIGPFAI---PAAQKGCF--VYANDLNPDSVRYLKINAKFNKVDDLICVHNMD 252
Query: 63 DIPDHDVLLAGFPCQP 78
L+A C+
Sbjct: 253 ARKFFSHLMAVSTCED 268
>gi|18410430|ref|NP_567034.1| Met-10+ like family protein [Arabidopsis thaliana]
gi|16604635|gb|AAL24110.1| unknown protein [Arabidopsis thaliana]
gi|28393917|gb|AAO42366.1| unknown protein [Arabidopsis thaliana]
gi|332645959|gb|AEE79480.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
[Arabidopsis thaliana]
Length = 468
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 5/76 (6%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ D+F GIG + +++++NP SV+ + N + I
Sbjct: 219 TVCDMFAGIGPFAI---PAAQKGCF--VYANDLNPDSVRYLKINAKFNKVDDLICVHNMD 273
Query: 63 DIPDHDVLLAGFPCQP 78
L+A C+
Sbjct: 274 ARKFFSHLMAVSTCED 289
>gi|238810090|dbj|BAH69880.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 416
Score = 34.5 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Query: 2 LKITDLFCGIGGIRLDLEQTF---NHRNVECFFSSEINPYSVKTYQANFPN 49
++I + F GIG + N E + + + Y A N
Sbjct: 4 IRIFETFSGIGAQHKAITWLNKKQKEVNFEIVAKCDWDIQATIAYAAIHHN 54
>gi|307544701|ref|YP_003897180.1| C-5 cytosine-specific DNA methylase [Halomonas elongata DSM 2581]
gi|307216725|emb|CBV41995.1| C-5 cytosine-specific DNA methylase [Halomonas elongata DSM 2581]
Length = 523
Score = 34.5 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI----FGDIAKI 59
+ D F G GG +EQ + +P ++ + AN P+ D+
Sbjct: 12 VVDNFAGGGGASEGIEQALGRP---VDLAINHDPTAIAVHTANHPDAEHSVADVWDVDPA 68
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ + C+ S+A
Sbjct: 69 EAVHGMPVGLAWFSPDCRHHSKA 91
>gi|14591212|ref|NP_143288.1| hypothetical protein PH1416 [Pyrococcus horikoshii OT3]
gi|3257839|dbj|BAA30522.1| 330aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 330
Score = 34.5 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI 56
+ D+F G+G + L + F+ +INP+++K + N + I
Sbjct: 186 VFDMFAGVGPFSILL-----AKKARMVFACDINPWAIKYLEENIKLNKVKNII 233
>gi|190571005|ref|YP_001975363.1| Putative methyltransferase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019526|ref|ZP_03335332.1| putative methyltransferase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357277|emb|CAQ54705.1| Putative methyltransferase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212994948|gb|EEB55590.1| putative methyltransferase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 182
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 10/80 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + DLFCG G E R + F + + Y+++ + + I DI I
Sbjct: 46 LNVLDLFCGSGSFS--FE--ALSRGAKHAFMVDSDYYNLQLPKKTAEDFGITNDITLICC 101
Query: 62 QDIP------DHDVLLAGFP 75
D++ P
Sbjct: 102 NANGLPRPISKCDIVFMDPP 121
>gi|315146000|gb|EFT90016.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
Length = 266
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 1/83 (1%)
Query: 1 MLKITDLF-CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
++ + LF G G + ++ + E + + +
Sbjct: 19 IMIVWALFDSGNGCYKRSAQKFEDIEIYSIGLDIENKNDHFIHLNLADYSYMFNDNKLFK 78
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+P D+++A PC+ +S A
Sbjct: 79 VLDKLPKPDLIIASPPCESWSVA 101
>gi|312899542|ref|ZP_07758870.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|311293311|gb|EFQ71867.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
Length = 254
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 1/83 (1%)
Query: 1 MLKITDLF-CGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKI 59
++ + LF G G + ++ + E + + +
Sbjct: 7 IMIVWALFDSGNGCYKRSAQKFEDIEIYSIGLDIENKNDHFIHLNLADYSYMFNDNKLFK 66
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+P D+++A PC+ +S A
Sbjct: 67 VLDKLPKPDLIIASPPCESWSVA 89
>gi|312136621|ref|YP_004003958.1| methyltransferase [Methanothermus fervidus DSM 2088]
gi|311224340|gb|ADP77196.1| methyltransferase [Methanothermus fervidus DSM 2088]
Length = 240
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 8/77 (10%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ D+F GIG + H + F+ EINP + K + N + + I
Sbjct: 93 TVVDMFAGIGYFSI---PIAVHSQPKKVFAIEINPTAFKYLKENIKLNKVEKKVFPILGD 149
Query: 63 DIP-----DHDVLLAGF 74
D D ++ G+
Sbjct: 150 CGKIAPELDADRVIMGY 166
>gi|293391527|ref|ZP_06635861.1| phosphatidylserine synthase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290952061|gb|EFE02180.1| phosphatidylserine synthase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 232
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 25/79 (31%), Gaps = 9/79 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQ-------ANFPNTLIFGDI 56
I DL G G + L + EI+P + + Q + DI
Sbjct: 38 ILDL--GCGSGLIALMLAQRSSAESRICAVEIDPAAAQQAQENVSASPWKDKIQVYQQDI 95
Query: 57 AKIKTQDIPDHDVLLAGFP 75
Q D+++A P
Sbjct: 96 ETFCAQSKHVFDLIVANPP 114
>gi|301118196|ref|XP_002906826.1| tRNA wybutosine-synthesizing protein, putative [Phytophthora
infestans T30-4]
gi|262108175|gb|EEY66227.1| tRNA wybutosine-synthesizing protein, putative [Phytophthora
infestans T30-4]
Length = 940
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
I DLFCGIG L H + E NP SV + N +
Sbjct: 778 TIVDLFCGIGYYVLPF---LVHGGASFVHACEWNPDSVAALRFNLERNHVADRCKVYLGD 834
Query: 63 DIPDHDVLLA 72
+ + A
Sbjct: 835 NRKSAPTIGA 844
>gi|238859529|ref|NP_001154967.1| methyltransferase-like protein 20 [Danio rerio]
gi|206558236|sp|A3KP85|MET20_DANRE RecName: Full=Methyltransferase-like protein 20
Length = 258
Score = 34.5 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 20/68 (29%), Gaps = 4/68 (5%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
K+ DL CG G C +++I+P + + N +
Sbjct: 110 KVLDLGCGCG----ASAIAARLSGASCVVANDIDPIAAIATKMNCELNNLAPLPCVTDNM 165
Query: 63 DIPDHDVL 70
+ D
Sbjct: 166 IGSETDGW 173
>gi|237703954|ref|ZP_04534435.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA]
gi|226901866|gb|EEH88125.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA]
Length = 367
Score = 34.5 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 65 PDHDVLLAGFPCQPFS 80
+ D++L G PCQ FS
Sbjct: 44 GELDMILGGPPCQGFS 59
>gi|292659002|gb|ADE34390.1| cytosine DNA methyltransferase [Turbot reddish body iridovirus]
Length = 227
Score = 34.5 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 13/79 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ +LF G G + S +I +
Sbjct: 1 MRVLELFSGTG--SVGAVARKRRW---TVVSLDI--------CGSPDIKQDILTWDYAAA 47
Query: 62 QDIPDHDVLLAGFPCQPFS 80
D++ A FPC+ FS
Sbjct: 48 YPPGYFDMVWASFPCETFS 66
>gi|330721358|gb|EGG99430.1| Modification methylase [gamma proteobacterium IMCC2047]
Length = 318
Score = 34.5 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 65 PDHDVLLAGFPCQPFSQAG 83
D + ++ G PCQ FS G
Sbjct: 34 KDVNFIIGGPPCQAFSVFG 52
>gi|326804225|ref|YP_004322043.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650285|gb|AEA00468.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Aerococcus urinae
ACS-120-V-Col10a]
Length = 465
Score = 34.5 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Query: 4 ITDLFCGIGGIRLDL-EQTFNHRNVECF-FSSEINPYSVKTYQANFPNTLIFGDIAKI-- 59
+ DLFCG+G L L ++ +E S E + + + + +
Sbjct: 321 VIDLFCGVGTFSLPLAKRAKALVGIEIVEQSIESAKRNARDNGIENAHFIARDARHGLAE 380
Query: 60 KTQDIPDHDVLLAGFP 75
+ D+LL P
Sbjct: 381 IEAEWGQADLLLLDPP 396
>gi|301619771|ref|XP_002939257.1| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog [Xenopus
(Silurana) tropicalis]
Length = 408
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
+ DL+ GIG L H + E NP++
Sbjct: 229 VVDLYSGIGYFTLPY---LVHAGASFVHACEWNPHA 261
>gi|332214229|ref|XP_003256234.1| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog [Nomascus
leucogenys]
Length = 448
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 239 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 270
>gi|326561616|gb|EGE11954.1| hypothetical protein E9M_05783 [Moraxella catarrhalis 46P47B1]
gi|326572752|gb|EGE22738.1| hypothetical protein E9S_00345 [Moraxella catarrhalis BC7]
Length = 46
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 2 LKITDLFCGIGGIRLDLE 19
+ I LF G GG+ L +
Sbjct: 1 MNIISLFSGCGGLDLGFK 18
>gi|301787627|ref|XP_002929227.1| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog
[Ailuropoda melanoleuca]
Length = 439
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 230 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 261
>gi|297683586|ref|XP_002819452.1| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog [Pongo
abelii]
Length = 448
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 239 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 270
>gi|297300061|ref|XP_001101713.2| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog [Macaca
mulatta]
Length = 505
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 239 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 270
>gi|291388505|ref|XP_002710656.1| PREDICTED: hypothetical protein, partial [Oryctolagus cuniculus]
Length = 391
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 230 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 261
>gi|281348316|gb|EFB23900.1| hypothetical protein PANDA_019352 [Ailuropoda melanoleuca]
Length = 441
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 232 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 263
>gi|194035597|ref|XP_001927670.1| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog [Sus
scrofa]
Length = 439
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 230 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 261
>gi|157098465|gb|AAH03057.2| TRMT12 protein [Homo sapiens]
Length = 366
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 230 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 261
>gi|143679771|sp|Q4R3U8|TYW2_MACFA RecName: Full=tRNA wybutosine-synthesizing protein 2 homolog;
Short=tRNA-yW-synthesizing protein 2; AltName:
Full=Alpha-amino-alpha-carboxypropyl transferase TYW2
Length = 448
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 239 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 270
>gi|127800251|gb|AAH79303.2| Trmt12 protein [Rattus norvegicus]
Length = 437
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 229 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 260
>gi|126342952|ref|XP_001374866.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 475
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
DL+ GIG L H N + E +P++
Sbjct: 262 VDLYAGIGYFTLPF---LIHANAAFVHACEWDPHAA 294
>gi|126322017|ref|XP_001372768.1| PREDICTED: similar to epithelial calcium channel [Monodelphis
domestica]
Length = 442
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
DL+ GIG L H N + E +P++
Sbjct: 230 VDLYAGIGYFTLPF---LIHANAAFVHACEWDPHAA 262
>gi|114621593|ref|XP_519945.2| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog [Pan
troglodytes]
Length = 448
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 239 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 270
>gi|171916113|ref|NP_001116448.1| tRNA wybutosine-synthesizing protein 2 homolog [Rattus norvegicus]
gi|143679922|sp|Q4V8B8|TYW2_RAT RecName: Full=tRNA wybutosine-synthesizing protein 2 homolog;
Short=tRNA-yW-synthesizing protein 2; AltName:
Full=Alpha-amino-alpha-carboxypropyl transferase TYW2
gi|127800077|gb|AAH97456.2| Trmt12 protein [Rattus norvegicus]
gi|149066341|gb|EDM16214.1| rCG59483 [Rattus norvegicus]
Length = 437
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 229 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 260
>gi|67971752|dbj|BAE02218.1| unnamed protein product [Macaca fascicularis]
Length = 505
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 239 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 270
>gi|157388919|ref|NP_060426.2| tRNA wybutosine-synthesizing protein 2 homolog [Homo sapiens]
gi|74726289|sp|Q53H54|TYW2_HUMAN RecName: Full=tRNA wybutosine-synthesizing protein 2 homolog;
Short=tRNA-yW-synthesizing protein 2; AltName:
Full=Alpha-amino-alpha-carboxypropyl transferase TYW2
gi|62897013|dbj|BAD96447.1| hypothetical protein FLJ20772 variant [Homo sapiens]
gi|119612468|gb|EAW92062.1| tRNA methyltranferase 12 homolog (S. cerevisiae) [Homo sapiens]
Length = 448
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 239 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 270
>gi|15079819|gb|AAH11713.1| TRNA methyltransferase 12 homolog (S. cerevisiae) [Homo sapiens]
Length = 448
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 239 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 270
>gi|73974594|ref|XP_851753.1| PREDICTED: similar to homolog of yeast tRNA methyltransferase
[Canis familiaris]
Length = 439
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 230 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 261
>gi|7021077|dbj|BAA91374.1| unnamed protein product [Homo sapiens]
Length = 448
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 239 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 270
>gi|302531913|ref|ZP_07284255.1| phage protein [Streptomyces sp. AA4]
gi|302440808|gb|EFL12624.1| phage protein [Streptomyces sp. AA4]
Length = 516
Score = 34.5 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 7/54 (12%), Positives = 16/54 (29%)
Query: 29 CFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQA 82
+ ++ +I+++ + D+L A C S A
Sbjct: 8 VYAANHWEQAIETHAANFPDTIHTIVNISQVNPRFFATTDLLWASPECTNHSGA 61
>gi|18977199|ref|NP_578556.1| putative RNA methyltransferase [Pyrococcus furiosus DSM 3638]
gi|50401623|sp|Q8U2K7|Y827_PYRFU RecName: Full=Uncharacterized RNA methyltransferase PF0827
gi|18892856|gb|AAL80951.1| putative RNA methyltransferase [Pyrococcus furiosus DSM 3638]
Length = 409
Score = 34.5 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 5/37 (13%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
K+ DL+ GIG L L + EIN +
Sbjct: 272 KVLDLYSGIGTFSLYLT----KKGFNVVG-VEINKTA 303
>gi|148264841|ref|YP_001231547.1| RNA methyltransferase [Geobacter uraniireducens Rf4]
gi|146398341|gb|ABQ26974.1| 23S rRNA m(5)U-1939 methyltransferase [Geobacter uraniireducens
Rf4]
Length = 470
Score = 34.5 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 3 KITDLFCGIGGIRL-DLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
++ DL+CGIGGI L + +E ++ + GD+A++
Sbjct: 324 RVLDLYCGIGGISLFLAGKAREVLGIEVVEAAVADAEMNAQLNNIRNCRFKAGDVARLLG 383
Query: 62 ---QDIPDHDVLLAGFP 75
++ D+++ P
Sbjct: 384 ELREEGEKVDLVILNPP 400
>gi|294664099|ref|ZP_06729495.1| C-5 cytosine-specific DNA methylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292606130|gb|EFF49385.1| C-5 cytosine-specific DNA methylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 593
Score = 34.5 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 26/103 (25%), Gaps = 29/103 (28%)
Query: 7 LFCGIGGIRLDLEQTFNHRN-----VECFFSSEINPYSVKTYQANFPNTLIFGDI----- 56
LFCG+GG C +++ ++ ++ D+
Sbjct: 11 LFCGLGGGAAGFNDARPDIGTARATFRCIGGIDVDAAAIADFRRLAGVPGTVMDLFDRDQ 70
Query: 57 -AKIKTQDIPDHD------------------VLLAGFPCQPFS 80
+ P V+ PC+ FS
Sbjct: 71 YRAFWGCEPPTDWREATTTDVHRAFGGERPNVMFLSAPCKGFS 113
>gi|309811112|ref|ZP_07704909.1| putative 23S rRNA (uracil-5-)-methyltransferase RumB [Dermacoccus
sp. Ellin185]
gi|308434900|gb|EFP58735.1| putative 23S rRNA (uracil-5-)-methyltransferase RumB [Dermacoccus
sp. Ellin185]
Length = 377
Score = 34.5 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 12/79 (15%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----- 58
+ DL+CG+GG L L EI P ++ + + + +
Sbjct: 237 VLDLYCGVGGFALHL-----ADGTRRVHGVEIEPSAIDSARRSATEAGSDATVTFDVGDA 291
Query: 59 --IKTQDIPDHDVLLAGFP 75
+ + D+++ P
Sbjct: 292 STLVMPEHDVPDLVVVNPP 310
>gi|307308733|ref|ZP_07588429.1| C-5 cytosine-specific DNA methylase [Sinorhizobium meliloti BL225C]
gi|306900739|gb|EFN31350.1| C-5 cytosine-specific DNA methylase [Sinorhizobium meliloti BL225C]
Length = 633
Score = 34.5 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Query: 4 ITDLFCGIGGIRLDLEQT-FNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
I D F G GG +E ++ ++E + + + ++
Sbjct: 26 IVDSFAGGGGASTGIEMALGRSPDIAINHNAEALALHAANHPETIHLSENVYRVDPLEHL 85
Query: 63 DIPDHDVLLAGFPCQPFSQA 82
+ C+ FS+A
Sbjct: 86 KGKHIGLAWFSPDCKHFSKA 105
>gi|417325|sp|P15840|MTSI_SPISQ RecName: Full=CPG DNA methylase; AltName: Full=Cytosine-specific
methyltransferase SssI; Short=M.SssI
gi|66468|pir||CTYMCS site-specific DNA-methyltransferase (cytosine-specific) (EC
2.1.1.73) SssI - Spiroplasma sp. (strain MQ1)
gi|47553|emb|CAA35058.1| unnamed protein product [Spiroplasma sp.]
Length = 386
Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 52 IFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI + + + + D+L FPCQ SQ G
Sbjct: 117 NIFDIRDLYKRTLKNIDLLTYSFPCQDLSQQG 148
>gi|325681464|ref|ZP_08160990.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Ruminococcus albus 8]
gi|324106954|gb|EGC01244.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Ruminococcus albus 8]
Length = 292
Score = 34.5 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 25/78 (32%), Gaps = 9/78 (11%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAK----- 58
+ DL G G I L LE H ++ E + + + N +
Sbjct: 119 VADLCSGSGCIALALE---KHLKCREVWAVEKSEAAAGYLKDNLALNHSAVKLVMGDVLD 175
Query: 59 -IKTQDIPDHDVLLAGFP 75
IP D+++ P
Sbjct: 176 SDTANKIPAADLIVCNPP 193
>gi|283786285|ref|YP_003366150.1| prophage DNA cytosine methylase [Citrobacter rodentium ICC168]
gi|282949739|emb|CBG89358.1| putative prophage DNA cytosine methylase [Citrobacter rodentium
ICC168]
Length = 575
Score = 34.5 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFG----DIAKI 59
I D F G GG +E + + ++ ++ N P+TL + D+ +
Sbjct: 5 IVDNFAGGGGASTGIELA---IGRSVDIAINHDENAIAMHKTNHPDTLHYCESVFDVDPL 61
Query: 60 KTQDIPDHDVLLAGFPCQPFSQA 82
+ C+ FS+A
Sbjct: 62 AATGGNPVGLAWFSPDCRHFSKA 84
>gi|310815193|ref|YP_003963157.1| DNA-cytosine methyltransferase [Ketogulonicigenium vulgare Y25]
gi|308753928|gb|ADO41857.1| DNA-cytosine methyltransferase [Ketogulonicigenium vulgare Y25]
Length = 555
Score = 34.1 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 69 VLLAGFPCQPFSQAG 83
+L+ G PCQ +S G
Sbjct: 169 ILIGGPPCQAYSLVG 183
>gi|321451313|gb|EFX63009.1| hypothetical protein DAPPUDRAFT_269241 [Daphnia pulex]
Length = 253
Score = 34.1 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
I D+FCG GG + E + +I+P ++ + N + I I
Sbjct: 92 IVDVFCGAGGNSIQF-----AFKCERVIAIDIDPSKIELARHNASVYGVADRIEFIVGDF 146
Query: 64 IP-----DHDVLLAGFP 75
DV+ P
Sbjct: 147 FQLAPSLKADVVFLSPP 163
>gi|293372275|ref|ZP_06618660.1| RNA methyltransferase, RsmD family [Bacteroides ovatus SD CMC 3f]
gi|292632717|gb|EFF51310.1| RNA methyltransferase, RsmD family [Bacteroides ovatus SD CMC 3f]
Length = 177
Score = 34.1 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 22/80 (27%), Gaps = 10/80 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------ 55
+ DLF G G I ++L R + S E +P
Sbjct: 46 ITALDLFAGTGSISIEL----VSRGCDHVISIEKDPAHHSFICKIMKEVQTDKCLPIRGD 101
Query: 56 IAKIKTQDIPDHDVLLAGFP 75
+ K D + A P
Sbjct: 102 VFKFIKNGREQFDFIFADPP 121
>gi|225156532|ref|ZP_03724866.1| Site-specific DNA methylase-like protein [Opitutaceae bacterium
TAV2]
gi|224802860|gb|EEG21108.1| Site-specific DNA methylase-like protein [Opitutaceae bacterium
TAV2]
Length = 255
Score = 34.1 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 22/79 (27%), Gaps = 20/79 (25%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ LF G + E P+ + GD+
Sbjct: 7 VLSLFPGADLLGRGFE----AEGFCVV---------------RGPDLVWGGDVRTFHAPS 47
Query: 64 IPDHDVLLAGFPCQPFSQA 82
++ G PCQ FS+A
Sbjct: 48 -GAFGGIIGGPPCQDFSRA 65
>gi|325180235|emb|CCA14638.1| tRNA wybutosinesynthesizing protein putative [Albugo laibachii
Nc14]
Length = 854
Score = 34.1 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSV 40
I DLFCGIG L H + + NP ++
Sbjct: 691 IVDLFCGIGYYVLPF---LVHGGASMVHACDWNPDAI 724
>gi|218460006|ref|ZP_03500097.1| DNA-cytosine methyltransferase [Rhizobium etli Kim 5]
Length = 343
Score = 34.1 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 69 VLLAGFPCQPFSQAG 83
VL+ G PCQ +S G
Sbjct: 97 VLIGGPPCQAYSLVG 111
>gi|325954408|ref|YP_004238068.1| methyltransferase [Weeksella virosa DSM 16922]
gi|323437026|gb|ADX67490.1| methyltransferase [Weeksella virosa DSM 16922]
Length = 180
Score = 34.1 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 12/85 (14%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSE--------INPYSVKTYQANFPNTLIF 53
+ + DLF G G I + R + + + IN + K + + +
Sbjct: 45 ITVLDLFAGTGNITYEF----ASRGAKHITAVDQHNGCIRFINETACKIRAQDRIDAIKA 100
Query: 54 GDIAKIKTQDIPDHDVLLAGFPCQP 78
++ + D++ P Q
Sbjct: 101 DVYKFLERKATQTFDIIFIDPPYQY 125
>gi|332300619|ref|YP_004442540.1| Protein of unknown function methylase [Porphyromonas
asaccharolytica DSM 20707]
gi|332177682|gb|AEE13372.1| Protein of unknown function methylase putative [Porphyromonas
asaccharolytica DSM 20707]
Length = 186
Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 20/87 (22%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI------ 56
++ DLF GIGGI L+ R S I + + +I
Sbjct: 46 RVLDLFAGIGGISLEF----VSRGAASVTS--IEKHPKHAAFIRSAADTLDKEILSTKQL 99
Query: 57 --------AKIKTQDIPDHDVLLAGFP 75
++ D +D++ A P
Sbjct: 100 LVLNRSVEQYLRQYDGEPYDLIFADPP 126
>gi|294674652|ref|YP_003575268.1| methyltransferase [Prevotella ruminicola 23]
gi|294473986|gb|ADE83375.1| putative methyltransferase [Prevotella ruminicola 23]
Length = 183
Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 25/80 (31%), Gaps = 10/80 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS------VKTYQANFPNTLIFGD 55
+ DLF G G I L+L R E S E++ + GD
Sbjct: 45 INALDLFSGTGSISLEL----VSRGCEHVVSVEMDRDHHKFITECLKKLDTDVCLPLRGD 100
Query: 56 IAKIKTQDIPDHDVLLAGFP 75
+ + D + A P
Sbjct: 101 VFRYIKSCKQQFDFIFADPP 120
>gi|222825028|dbj|BAH22186.1| putative methyltransferase [Wolbachia endosymbiont of Cadra
cautella]
Length = 185
Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 10/80 (12%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
L + DLFCG G E R + F + + Y+++ + + I DI I
Sbjct: 49 LNVLDLFCGSGSFS--FE--ALSRGAKHAFMVDSDYYNLQLPKKTAEDFGITNDITLICC 104
Query: 62 QDIP------DHDVLLAGFP 75
D++ P
Sbjct: 105 NANGLPRPISKCDIVFMDPP 124
>gi|225155057|ref|ZP_03723553.1| Site-specific DNA methylase-like protein [Opitutaceae bacterium
TAV2]
gi|224804227|gb|EEG22454.1| Site-specific DNA methylase-like protein [Opitutaceae bacterium
TAV2]
Length = 255
Score = 34.1 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 22/79 (27%), Gaps = 20/79 (25%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ LF G + E P+ + GD+
Sbjct: 7 VLSLFPGADLLGRGFE----AEGFCVV---------------RGPDLVWGGDVRTFHVP- 46
Query: 64 IPDHDVLLAGFPCQPFSQA 82
++ G PCQ FS+A
Sbjct: 47 PGAFGGIIGGPPCQDFSRA 65
>gi|315230383|ref|YP_004070819.1| tRNA (Guanine37-N1) -methyltransferase [Thermococcus barophilus MP]
gi|315183411|gb|ADT83596.1| tRNA (Guanine37-N1) -methyltransferase [Thermococcus barophilus MP]
Length = 330
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI 56
+ D+F G+G + L + V F+ +INP++VK + N I
Sbjct: 185 VFDMFAGVGPYSILL-----AKKVRLVFACDINPWAVKYLEENKRLNKTPNVI 232
>gi|47225350|emb|CAG09850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 21/67 (31%), Gaps = 3/67 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
+ DL+ GIG L H + E NP +VK Q N +
Sbjct: 210 TVVDLYAGIGYFTLPY---LVHAKARHVHACEWNPEAVKALQKNLVTNGVSEHCTIHPGD 266
Query: 63 DIPDHDV 69
+ V
Sbjct: 267 NRKLQLV 273
>gi|317008727|gb|ADU79307.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori
India7]
Length = 39
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 12/34 (35%), Gaps = 4/34 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI 35
L LF G G L EC ++EI
Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEI 36
>gi|221067990|ref|ZP_03544095.1| C-5 cytosine-specific DNA methylase [Comamonas testosteroni KF-1]
gi|221068053|ref|ZP_03544158.1| C-5 cytosine-specific DNA methylase [Comamonas testosteroni KF-1]
gi|220713013|gb|EED68381.1| C-5 cytosine-specific DNA methylase [Comamonas testosteroni KF-1]
gi|220713076|gb|EED68444.1| C-5 cytosine-specific DNA methylase [Comamonas testosteroni KF-1]
Length = 596
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 26/108 (24%), Gaps = 29/108 (26%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-----VECFFSSEIN-------------------- 36
+K LFCG+GG + C +++
Sbjct: 6 IKHFHLFCGLGGGARGFNRASPRVGNLQARFRCIGGIDVDSASIRDFGRLTGVPGTVLDL 65
Query: 37 ---PYSVKTYQANFPNTLIFGDIAKIKTQDIP-DHDVLLAGFPCQPFS 80
+ + P I+ ++ PC+ FS
Sbjct: 66 FDREQYRTFHGSEPPADWHEATATDIQRAAGGERPHIVFLSAPCKGFS 113
>gi|50237528|gb|AAT71861.1| cytosine DNA methyltransferase [Rock bream iridovirus]
gi|62421237|gb|AAX82357.1| cytosine DNA methyltransferase [Orange-spotted grouper
iridovirus]
Length = 227
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 13/79 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ +LF G G + S +I +
Sbjct: 1 MRVLELFSGTG--SVGAVARQRRW---TVVSLDI--------CGSPDIKQDILTWDYAAA 47
Query: 62 QDIPDHDVLLAGFPCQPFS 80
D++ A FPC+ FS
Sbjct: 48 YPPGYFDIVWASFPCETFS 66
>gi|296227242|ref|XP_002759290.1| PREDICTED: tRNA wybutosine-synthesizing protein 2 homolog
[Callithrix jacchus]
Length = 448
Score = 34.1 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
DL+ GIG L H + E NP++
Sbjct: 239 VDLYAGIGYFTLPF---LVHAGAAFVHACEWNPHA 270
>gi|189460011|ref|ZP_03008796.1| hypothetical protein BACCOP_00646 [Bacteroides coprocola DSM 17136]
gi|189433261|gb|EDV02246.1| hypothetical protein BACCOP_00646 [Bacteroides coprocola DSM 17136]
Length = 176
Score = 34.1 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 23/79 (29%), Gaps = 10/79 (12%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGD------I 56
+ DLF G G I ++L R E S E +P +
Sbjct: 46 TVLDLFAGTGSISIEL----VSRGCERVISVEKDPQHHAFICKVMNEVKTDKCLPLRGDV 101
Query: 57 AKIKTQDIPDHDVLLAGFP 75
K + D + A P
Sbjct: 102 FKYIERCNEQFDFIFADPP 120
>gi|328773183|gb|EGF83220.1| hypothetical protein BATDEDRAFT_21725 [Batrachochytrium
dendrobatidis JAM81]
Length = 304
Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 10/77 (12%)
Query: 4 ITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQD 63
+ D FCG+GG + T + + +I+P ++ + N + I I
Sbjct: 142 MVDGFCGVGGNAIQFAMTCDK-----VIAIDIDPVRLECARHNAAVYGVQDKIEFICGDF 196
Query: 64 IP-----DHDVLLAGFP 75
+ D + P
Sbjct: 197 MELAPTIKADGVFMSPP 213
>gi|224002032|ref|XP_002290688.1| hypothetical protein THAPSDRAFT_262512 [Thalassiosira pseudonana
CCMP1335]
gi|220974110|gb|EED92440.1| hypothetical protein THAPSDRAFT_262512 [Thalassiosira pseudonana
CCMP1335]
Length = 203
Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ 62
++ D++ GIG L H + E NP ++ + N + + ++
Sbjct: 40 RVLDMYAGIGYYTL---PALIHGKARHVTACEWNPNAIYALRYNLKANGVDDKVTVLEGD 96
Query: 63 D 63
Sbjct: 97 C 97
>gi|83854666|ref|ZP_00948196.1| DNA modification methylase M.NGOI [Sulfitobacter sp. NAS-14.1]
gi|83842509|gb|EAP81676.1| DNA modification methylase M.NGOI [Sulfitobacter sp. NAS-14.1]
Length = 254
Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 67 HDVLLAGFPCQPFSQAG 83
D+L G PC PFS AG
Sbjct: 1 MDLLAGGLPCPPFSVAG 17
>gi|157311493|ref|YP_001469536.1| hypothetical protein phi1p189 [Enterobacteria phage Phi1]
gi|149380697|gb|ABR24702.1| hypothetical protein phi1p189 [Enterobacteria phage Phi1]
Length = 238
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 24/88 (27%), Gaps = 18/88 (20%)
Query: 8 FCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ----- 62
F G G + LE + + + + +I + T
Sbjct: 10 FDGSGIM--GLEWA--KAGHKVVCFN--ADDADHGTYKKYNTRFEHPNITYVNTWIDLNW 63
Query: 63 -------DIPDHDVLLAGFPCQPFSQAG 83
+ D++ A PC + +G
Sbjct: 64 LERAMDLEWGKPDIIFAFPPCTNLAVSG 91
>gi|70606377|ref|YP_255247.1| hypothetical protein Saci_0559 [Sulfolobus acidocaldarius DSM 639]
gi|68567025|gb|AAY79954.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
Length = 258
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDI 56
I ++F G G + +S +INPY+ N F I
Sbjct: 117 TIINMFSGFGPFSIISSILGKPS---VVYSIDINPYAYYYMMVNVDLNKTFNVI 167
>gi|327396874|dbj|BAK14240.1| cytosine DNA methyltransferase [Red sea bream iridovirus]
Length = 227
Score = 34.1 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 13/79 (16%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ +LF G G + S +I +
Sbjct: 1 MRVLELFSGTG--SVGAVARQRRW---TVVSLDI--------CGSPDIKQDILTWDYAAA 47
Query: 62 QDIPDHDVLLAGFPCQPFS 80
D++ A FPC+ FS
Sbjct: 48 YPPGYFDIVWASFPCETFS 66
>gi|240275787|gb|EER39300.1| trimethylguanosine synthase [Ajellomyces capsulatus H143]
gi|325093154|gb|EGC46464.1| trimethylguanosine synthase [Ajellomyces capsulatus H88]
Length = 240
Score = 34.1 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + Q+ + ++ E +P ++ + N + I + +
Sbjct: 78 VDAFAGAGGNTIAFAQSDR---WKRIYAIEKDPTVLQCAKHNAKLYGVEDKITWFEGDCM 134
Query: 65 P----------DHDVLLAGFP 75
+ V+ A P
Sbjct: 135 QIIKHQLSVLASYSVVFASPP 155
>gi|238027654|ref|YP_002911885.1| C-5 cytosine-specific DNA methylase [Burkholderia glumae BGR1]
gi|237876848|gb|ACR29181.1| C-5 cytosine-specific DNA methylase [Burkholderia glumae BGR1]
Length = 636
Score = 34.1 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 6/80 (7%), Positives = 18/80 (22%), Gaps = 10/80 (12%)
Query: 1 MLKITDLFCGIGGIRLDLEQTFNHRN-----VECFFSSEINPYSVKTYQANFPNTLIFGD 55
+ G+GG + + C + +P + + ++
Sbjct: 4 VYNNFSFCAGLGGGAKGFTKAMSRVGAMTASWRCIGGIDNDPAAARDFRRLVGTDC---- 59
Query: 56 IAKIKTQDIPDHDVLLAGFP 75
+ + P
Sbjct: 60 -TVMDLFTREQYTAFHGAPP 78
>gi|207111679|ref|ZP_03245841.1| cytosine specific DNA methyltransferase [Helicobacter pylori
HPKX_438_CA4C1]
Length = 40
Score = 34.1 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
I+ ++++ G PCQ FS G
Sbjct: 3 IELCKAKKVNMIIGGPPCQGFSLKG 27
>gi|13358092|ref|NP_078366.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 3
str. ATCC 700970]
gi|170762087|ref|YP_001752613.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 3
str. ATCC 27815]
gi|171920252|ref|ZP_02931618.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 1
str. ATCC 27813]
gi|186701746|ref|ZP_02971433.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 6
str. ATCC 27818]
gi|11356834|pir||D82880 cytosine-specific methyltransferase UU528 [imported] - Ureaplasma
urealyticum
gi|6899531|gb|AAF30941.1|AE002151_7 cytosine-specific methyltransferase [Ureaplasma parvum serovar 3
str. ATCC 700970]
gi|168827664|gb|ACA32926.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 3
str. ATCC 27815]
gi|171902654|gb|EDT48943.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 1
str. ATCC 27813]
gi|186701017|gb|EDU19299.1| cytosine-specific methyltransferase [Ureaplasma parvum serovar 6
str. ATCC 27818]
Length = 299
Score = 34.1 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 59 IKTQDIPDHDVLLAGFPCQPFSQAG 83
IK+ D+L FPCQ S AG
Sbjct: 7 IKSVGNKGIDLLTYSFPCQDLSTAG 31
>gi|207108782|ref|ZP_03242944.1| adenine/cytosine DNA methyltransferase [Helicobacter pylori
HPKX_438_CA4C1]
Length = 37
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 12/34 (35%), Gaps = 4/34 (11%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEI 35
L LF G G L EC ++EI
Sbjct: 7 LTYISLFSGAGVGCYGL----LEEGFECVATNEI 36
>gi|255932973|ref|XP_002557957.1| Pc12g11390 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582576|emb|CAP80766.1| Pc12g11390 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 236
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 25/81 (30%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + T + ++ E NP +K + N + I +
Sbjct: 76 VDAFAGAGGNTIAFALTGK---WKRIYAIEKNPAVLKCAKHNAKVYGVEDKITWFEGDCF 132
Query: 65 P----------DHDVLLAGFP 75
+ V+ A P
Sbjct: 133 EILKNQLKELAPYSVVFASPP 153
>gi|240047619|ref|YP_002961007.1| Cytosine-specific methyltransferase [Mycoplasma conjunctivae
HRC/581]
gi|239985191|emb|CAT05204.1| Cytosine-specific methyltransferase [Mycoplasma conjunctivae]
Length = 409
Score = 33.8 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 12/40 (30%)
Query: 44 QANFPNTLIFGDIAKIKTQDIPDHDVLLAGFPCQPFSQAG 83
DI D D+L FPCQ S G
Sbjct: 107 PFVRQPNNYISDIKNHNQPLPKDIDILTYSFPCQDISNMG 146
>gi|303246914|ref|ZP_07333190.1| RNA methyltransferase, TrmA family [Desulfovibrio fructosovorans
JJ]
gi|302491621|gb|EFL51504.1| RNA methyltransferase, TrmA family [Desulfovibrio fructosovorans
JJ]
Length = 450
Score = 33.8 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Query: 6 DLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYS 39
D++CG GGI L L E + E + +
Sbjct: 311 DVYCGCGGIALAL-----APGFETVYGVEADKRA 339
>gi|57471644|emb|CAI39483.1| tRNA aspartic acid methyltransferase 1 [Homo sapiens]
Length = 134
Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 28 ECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK--TQDIPDHDVLLAGFPCQPFSQ 81
+ + ++N + + Y+ NFP+T + I I D D++L PCQPF++
Sbjct: 7 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTR 63
>gi|57471643|emb|CAI39482.1| tRNA aspartic acid methyltransferase 1 [Homo sapiens]
Length = 112
Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 28 ECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK--TQDIPDHDVLLAGFPCQPFSQ 81
+ + ++N + + Y+ NFP+T + I I D D++L PCQPF++
Sbjct: 7 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTR 63
>gi|14573297|gb|AAK68035.1| DNA methyltransferase 2c [Homo sapiens]
Length = 115
Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 28 ECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK--TQDIPDHDVLLAGFPCQPFSQ 81
+ + ++N + + Y+ NFP+T + I I D D++L PCQPF++
Sbjct: 10 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTR 66
>gi|14573295|gb|AAK68034.1| DNA methyltransferase 2b [Homo sapiens]
Length = 137
Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 28 ECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIK--TQDIPDHDVLLAGFPCQPFSQ 81
+ + ++N + + Y+ NFP+T + I I D D++L PCQPF++
Sbjct: 10 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTR 66
>gi|225563205|gb|EEH11484.1| trimethylguanosine synthase [Ajellomyces capsulatus G186AR]
Length = 240
Score = 33.8 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + Q+ + ++ E +P ++ + N + I + +
Sbjct: 78 VDAFAGAGGNTIAFAQSDR---WKRIYAIEKDPTVLQCAKHNAKLYGVEDKITWFEGDCM 134
Query: 65 P----------DHDVLLAGFP 75
+ V+ A P
Sbjct: 135 QIIKHQLSVLASYSVVFASPP 155
>gi|118431330|ref|NP_147718.2| hypothetical protein APE_1106.1 [Aeropyrum pernix K1]
gi|116062653|dbj|BAA80091.2| conserved hypothetical protein [Aeropyrum pernix K1]
Length = 344
Score = 33.8 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPY 38
++ D+F G+GG + +S+INP+
Sbjct: 188 RVLDMFSGVGGFSIHTASLRRAS----VVASDINPH 219
>gi|170718850|ref|YP_001784027.1| C5 methylase (MAV1virus-like) [Haemophilus somnus 2336]
gi|168826979|gb|ACA32350.1| putative C5 methylase (MAV1virus-like) [Haemophilus somnus 2336]
Length = 252
Score = 33.8 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 28/80 (35%), Gaps = 7/80 (8%)
Query: 7 LF-CGIGGIRLDLEQTFNHRNVECF-FSSEINPYSVKTYQANFPNTLIFGDIAKIKTQ-- 62
LF G G N+E + +I + N + + Q
Sbjct: 11 LFDSGNGCYTQA---AQPFPNIEIYPIGIDIERKNRHFLPLNLADFGRLFGDNTLFNQLD 67
Query: 63 DIPDHDVLLAGFPCQPFSQA 82
+P DV+LA PC+ FS A
Sbjct: 68 SLPKPDVILASPPCESFSVA 87
>gi|329848440|ref|ZP_08263468.1| C-5 cytosine-specific DNA methylase family protein [Asticcacaulis
biprosthecum C19]
gi|328843503|gb|EGF93072.1| C-5 cytosine-specific DNA methylase family protein [Asticcacaulis
biprosthecum C19]
Length = 618
Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 12/108 (11%), Positives = 26/108 (24%), Gaps = 29/108 (26%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRN-----VECFFSSEINPYSVKTYQANFPNTLIFGDI 56
FCGIG + + C +++ ++ + D+
Sbjct: 10 YTHFHFFCGIGMGAAGFNEGTARLGNLEARLRCIGGIDVDKDAIANFDRFAGVKGTCMDL 69
Query: 57 AKIKTQD------------------------IPDHDVLLAGFPCQPFS 80
++ D++ PC+ FS
Sbjct: 70 FTLEQYIAFHGKAPPPGWREATPADIQRAAGFERPDIVFLSAPCKGFS 117
>gi|115400383|ref|XP_001215780.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191446|gb|EAU33146.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 173
Score = 33.8 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 25/81 (30%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G GG + ++ + ++ E NP + + N + I +
Sbjct: 13 IDAFAGAGGNAIAFARSGK---WKRIYAIEKNPSVLLCAKHNAKIYGVADKITWFEGDCF 69
Query: 65 P----------DHDVLLAGFP 75
+ V+ A P
Sbjct: 70 EIIKNQLKDLAPYSVVFASPP 90
>gi|13475779|ref|NP_107346.1| SUN-family protein [Mesorhizobium loti MAFF303099]
gi|14026535|dbj|BAB53132.1| SUN-family protein [Mesorhizobium loti MAFF303099]
Length = 429
Score = 33.8 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 8/82 (9%)
Query: 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKT 61
+++ D G GG L L ++R F+ + + + ++ +
Sbjct: 233 MQVLDFCAGAGGKTLALSAAMDNRG--QIFAHDAEK-ARLAPIFDRIRRSENRNVQVVTK 289
Query: 62 QDI-----PDHDVLLAGFPCQP 78
D++L PC
Sbjct: 290 PAELAPLSNHMDIVLVDAPCTG 311
>gi|154281669|ref|XP_001541647.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411826|gb|EDN07214.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 240
Score = 33.4 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 13/81 (16%)
Query: 5 TDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIKTQDI 64
D F G+GG + Q+ + ++ E +P ++ + N + I + +
Sbjct: 78 VDAFAGVGGNTIAFAQSDR---WKRIYAIEKDPTVLQCAKHNAKLYGVEDKITWFEGDCM 134
Query: 65 P----------DHDVLLAGFP 75
+ V+ A P
Sbjct: 135 QIIKHQLSLLASYSVVFASPP 155
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.315 0.146 0.506
Lambda K H
0.267 0.0448 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 775,458,799
Number of Sequences: 14124377
Number of extensions: 20553009
Number of successful extensions: 126506
Number of sequences better than 10.0: 4000
Number of HSP's better than 10.0 without gapping: 2618
Number of HSP's successfully gapped in prelim test: 1382
Number of HSP's that attempted gapping in prelim test: 118558
Number of HSP's gapped (non-prelim): 4352
length of query: 83
length of database: 4,842,793,630
effective HSP length: 54
effective length of query: 29
effective length of database: 4,080,077,272
effective search space: 118322240888
effective search space used: 118322240888
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.0 bits)
S2: 76 (33.8 bits)