HHsearch alignment for GI: 254780519 and conserved domain: COG4794
>COG4794 EscS Type III secretory pathway, component EscS [Intracellular trafficking and secretion].
Probab=99.96 E-value=2.1e-29 Score=163.57 Aligned_cols=87 Identities=34% Similarity=0.576 Sum_probs=85.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98799999999999999999999999999999999999999884653698899999999999999999999999999999
Q gi|254780519|r 1 MNEADVLEIARAAMWTILSSSAPVLFSAMFLGILIAFLQALTQIQEVTLTFVPKIIAVFITLIISAPFIGGQISSFVTLV 80 (88)
Q Consensus 1 M~~~~vi~l~~~al~~~l~ls~P~Ll~alvvGl~Isi~QA~TQIQEqTLsFvPKliav~~~l~~~~pwm~~~l~~f~~~i 80 (88)
T Consensus 1 m~~~~i~~~~~qaL~liLilSlPpvivAsvvGllVslvQA~TQiQdQTl~f~iKLl~V~~tl~lt~~Wlg~~ll~fa~~i 80 (89)
T COG4794 1 MDMDDIVFLTSQALWLILILSLPPVIVASVVGLLVSLVQALTQIQDQTLPFGIKLLAVSATLFLTAGWLGATLLNFAEQI 80 (89)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 96779999999999999999611999999999999999999999986788999999999999997077588999999999
Q ss_pred HHHHHHC
Q ss_conf 9993440
Q gi|254780519|r 81 LSRIQSS 87 (88)
Q Consensus 81 f~~ip~~ 87 (88)
T Consensus 81 ~~~~~~~ 87 (89)
T COG4794 81 FLNIPKA 87 (89)
T ss_pred HHHHHHC
T ss_conf 9986640