HHsearch alignment for GI: 254780519 and conserved domain: PRK06010

>PRK06010 fliQ flagellar biosynthesis protein FliQ; Reviewed.
Probab=100.00  E-value=2.4e-39  Score=212.32  Aligned_cols=87  Identities=55%  Similarity=0.949  Sum_probs=85.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             98799999999999999999999999999999999999999884653698899999999999999999999999999999
Q gi|254780519|r    1 MNEADVLEIARAAMWTILSSSAPVLFSAMFLGILIAFLQALTQIQEVTLTFVPKIIAVFITLIISAPFIGGQISSFVTLV   80 (88)
Q Consensus         1 M~~~~vi~l~~~al~~~l~ls~P~Ll~alvvGl~Isi~QA~TQIQEqTLsFvPKliav~~~l~~~~pwm~~~l~~f~~~i   80 (88)
T Consensus         1 Mt~~~vi~l~~~al~~~l~ls~P~L~valvVGl~IslfQA~TQIqEqTLsFvPKliav~~~l~~~~pwm~~~l~~ft~~i   80 (88)
T PRK06010          1 MNEADALDVVRDAIWTVLIASGPAVLAAMVVGVAIALFQALTQIQEMTLTFVPKIVAIFVTLLLTLPFMGAQISAFTLRI   80 (88)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             98889999999999999999876999999999999999999999998998799999999999998889999999999999


Q ss_pred             HHHHHHC
Q ss_conf             9993440
Q gi|254780519|r   81 LSRIQSS   87 (88)
Q Consensus        81 f~~ip~~   87 (88)
T Consensus        81 f~~I~gg   87 (88)
T PRK06010         81 YSRIAGG   87 (88)
T ss_pred             HHHHCCC
T ss_conf             9871346