HHsearch alignment for GI: 254780519 and conserved domain: pfam01311
>pfam01311 Bac_export_1 Bacterial export proteins, family 1. This family includes the following members; FliR, MopE, SsaT, YopT, Hrp, HrcT and SpaR All of these members export proteins, that do not possess signal peptides, through the membrane. Although the proteins that these exporters move may be different, the exporters are thought to function in similar ways.
Probab=97.05 E-value=0.016 Score=31.75 Aligned_cols=82 Identities=17% Similarity=0.254 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999-99988465369889999999999999999999999999999999
Q gi|254780519|r 4 ADVLEIARAAMWTILSSSAPVLFSAMFLGILIAFL-QALTQIQEVTLTFVPKIIAVFITLIISAPFIGGQISSFVTLVLS 82 (88)
Q Consensus 4 ~~vi~l~~~al~~~l~ls~P~Ll~alvvGl~Isi~-QA~TQIQEqTLsFvPKliav~~~l~~~~pwm~~~l~~f~~~if~ 82 (88)
T Consensus 167 ~~~~~~~~~~F~~al~lAaPii~~~ll~~l~lGll~R~~PQlnvf~lg~pvki~~gl~~l~~~lp~~~~~~~~~~~~~fd 246 (249)
T pfam01311 167 KFLLKALSQLFSIALLLAAPVIILLLLIDLALGLLSRFAPQLNVFVLSFPIKSAVGLLLLALYLPYILPLFKEELSLLFD 246 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999971731006998966999999999999999999999999999987
Q ss_pred HHH
Q ss_conf 934
Q gi|254780519|r 83 RIQ 85 (88)
Q Consensus 83 ~ip 85 (88)
T Consensus 247 ~~~ 249 (249)
T pfam01311 247 LLS 249 (249)
T ss_pred HCC
T ss_conf 419