RPSBLAST alignment for GI: 254780519 and conserved domain: TIGR01403

>gnl|CDD|130470 TIGR01403, fliQ_rel_III, type III secretion protein, HrpO family. This model represents one of several families of proteins related to bacterial flagellar biosynthesis proteins and involved in bacterial type III protein secretion systems. This family is homologous to, but distinguished from, flagellar biosynthetic protein FliQ. This model may not identify all type III secretion system FliQ homologs. Length = 81

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 31/80 (38%), Positives = 54/80 (67%)

Query: 5  DVLEIARAAMWTILSSSAPVLFSAMFLGILIAFLQALTQIQEVTLTFVPKIIAVFITLII 64
          D++++   A+  +L  S P +  A  +G+L++ LQALTQ+Q+ TL F  K+IAVFITL++
Sbjct: 1  DIVQLTNQALLLVLILSLPPVLVAAIVGLLVSLLQALTQLQDQTLPFAIKLIAVFITLML 60

Query: 65 SAPFIGGQISSFVTLVLSRI 84
          +A ++G +I +F   + + I
Sbjct: 61 TAGWLGAEILNFANQIFTMI 80