HHsearch alignment for GI: 254780520 and conserved domain: PRK12634

>PRK12634 flgD flagellar basal body rod modification protein; Reviewed.
Probab=99.98  E-value=1.4e-31  Score=201.99  Aligned_cols=82  Identities=30%  Similarity=0.549  Sum_probs=72.8

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHCCCE
Q ss_conf             5556677333388999999999832998999889789999999999999999999999999---9999976455322614
Q gi|254780520|r   13 EFSKSKSKKTLGQDAFLKLLITQIKHQDPTEPMKASEQVAQLAVFSQMEQSVQMNSTLQEL---LKSNNLAQASSYIGKN   89 (131)
Q Consensus        13 ~~~~~~~~~~l~~d~FLkLL~aQL~nQDP~~P~d~~e~isQlAqfs~leq~~~~~~~l~~~---~~~~~~~~a~sliGk~   89 (131)
T Consensus        17 ~~~~~~~~~~Lg~~dFL~LL~tQLqNQDPl~PmD~~ef~aQLAQfS~vE~~~~~n~~l~~l~~~~~s~q~l~a~slIGk~   96 (221)
T PRK12634         17 SSKVAKKEEALGQADFLKLMTEQLQHQDPLKPMENSAFLGQLAQFSTVQGIGDLNTKVSNFSDSMNSDQVLKGAALVGHN   96 (221)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
T ss_conf             78888752101889999999999852899998866889999998999999999999999999999888998888631967


Q ss_pred             EECCC
Q ss_conf             66389
Q gi|254780520|r   90 ITNAD   94 (131)
Q Consensus        90 V~~~~   94 (131)
T Consensus        97 V~v~~  101 (221)
T PRK12634         97 VLVPS  101 (221)
T ss_pred             EEECC
T ss_conf             99738