HHsearch alignment for GI: 254780520 and conserved domain: PRK12812

>PRK12812 flgD flagellar basal body rod modification protein; Reviewed.

Probab=100.00  E-value=3.8e-32  Score=205.24  Aligned_cols=76  Identities=37%  Similarity=0.567  Sum_probs=69.3

Q ss_pred             CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHCCCEEEC
Q ss_conf             67733338899999999983299899988978999999999999999999999999999---99976455322614663
Q gi|254780520|r   17 SKSKKTLGQDAFLKLLITQIKHQDPTEPMKASEQVAQLAVFSQMEQSVQMNSTLQELLK---SNNLAQASSYIGKNITN   92 (131)
Q Consensus        17 ~~~~~~l~~d~FLkLL~aQL~nQDP~~P~d~~e~isQlAqfs~leq~~~~~~~l~~~~~---~~~~~~a~sliGk~V~~   92 (131)
T Consensus        38 ~np~s~LdkDaFLkLL~TQLqNQDPlnPMDn~eftaQLAQfSsvEqi~~lN~tL~sL~~~~~s~q~lqA~slIGK~V~v  116 (259)
T PRK12812         38 SNPNSQLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLAALEMQENTNTTMQKLVEQMQSSMSTSALSALGKMATV  116 (259)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_conf             8860244288999999999731799998667999999998888999999999999999998778999998740847996