HHsearch alignment for GI: 254780520 and conserved domain: PRK12813

>PRK12813 flgD flagellar basal body rod modification protein; Reviewed.

Probab=99.97  E-value=2.4e-30  Score=194.83  Aligned_cols=75  Identities=40%  Similarity=0.562  Sum_probs=67.2

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHCCCEEEC
Q ss_conf             7733338899999999983299899988978999999999999999999999999999---99976455322614663
Q gi|254780520|r   18 KSKKTLGQDAFLKLLITQIKHQDPTEPMKASEQVAQLAVFSQMEQSVQMNSTLQELLK---SNNLAQASSYIGKNITN   92 (131)
Q Consensus        18 ~~~~~l~~d~FLkLL~aQL~nQDP~~P~d~~e~isQlAqfs~leq~~~~~~~l~~~~~---~~~~~~a~sliGk~V~~   92 (131)
T Consensus        25 ~~~~~~d~d~FLkLL~tQLqNQDPl~PmDn~ef~sQLAQfS~vEq~~~~n~~l~~l~~~~~s~~~~qa~~lIGk~V~~  102 (223)
T PRK12813         25 DSALTSDFETFLRMLTTQLQNQDPLNPMDSSDYAAQLATFSGVEQQVKTNDLLTGLGASLGSMGLSQLAGWIGREARA  102 (223)
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf             432200499999999999851899999887899999998998999999999999999998878999999755977997