BLAST/PSIBLAST alignment of GI: 254780520 and GI: 13472597 at iteration 1
>gi|13472597|ref|NP_104164.1| flagellar basal body rod modification protein [Mesorhizobium loti MAFF303099] Length = 135
>gi|14023343|dbj|BAB49950.1| flagellar hook assembly scaffolding protein; FlgD [Mesorhizobium loti MAFF303099] Length = 135
 Score =  116 bits (291), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 54/115 (46%), Positives = 88/115 (76%)

Query: 15  SKSKSKKTLGQDAFLKLLITQIKHQDPTEPMKASEQVAQLAVFSQMEQSVQMNSTLQELL 74
           +KS SK  +   +FLKLLI ++K+QDPT+PM +++ VAQLA FSQ+EQSVQ N+ L +++
Sbjct: 17  TKSTSKTAVDYQSFLKLLIAEMKNQDPTKPMDSTQYVAQLATFSQVEQSVQSNTKLDQIM 76

Query: 75  KSNNLAQASSYIGKNITNADGSISGVVNAIQVSSTGLTAITVDNTEIPITTGIRI 129
           +S+ L+QA + IG++IT+ADG  +G+V ++ ++S+GL A+  D T++P+  G+ I
Sbjct: 77  QSSALSQADAIIGRSITSADGKTTGIVASVTLASSGLIAVLQDGTKVPVGPGVSI 131