HHsearch alignment of GI: 254780522 and MMDB domain: 1vh6_A_
>1vh6_A (A:) Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis}
Probab=91.77 E-value=0.9 Score=24.25 Aligned_cols=105 Identities=9% Similarity=0.131 Sum_probs=84.7
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
Q ss_conf 2699999972237979999999999999999998368--88399999999999999999999609889989899999999
Q gi|254780522|r 2 RQYYHETIQESSIECRKREHWILDRSISLLSIAHKSL--PNSKQAVEALFYTSRVWVVFIQDLVSEDNHLPQEVKLNLIS 79 (114)
Q Consensus 2 r~~Y~~~~~~s~~~~R~~E~~~l~~~~~~L~~A~~~~--~~~~~~~eAL~~N~rLWt~~~~dl~~~~N~LP~~LRa~Lis 79 (114)
.++|.++.- .+.+|=+.=-.+|..+...|..|.... .+..+..++|..-+.+-+-|..-|-.. .++=.+|.+
T Consensus 9 ~~aY~~~~v-~tasp~~Li~mLyd~ai~~l~~a~~ai~~~~~~~~~~~l~ka~~Ii~eL~~sLd~~-----~eiA~~L~~ 82 (145)
T 1vh6_A 9 YTAYQQNSV-NTATPGELTLXLYNGCLKFIRLAAQAIENDDXERKNENLIKAQNIIQELNFTLNRN-----IELSASXGA 82 (145)
T ss_dssp ------------CCTTHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHTTHHHH
T ss_pred HHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC-----HHHHHHHHH
T ss_conf 999998535-04999999999999999999999999985799999999999999999988652468-----089999999
Q ss_pred HHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf 999999999-999547843127999999999951
Q gi|254780522|r 80 IGLWVLKEC-ERIRRNKSNSYQDIIDVISIVRDG 112 (114)
Q Consensus 80 L~~fv~~~t-~~v~~~~~~~l~~LI~IN~~I~~G 112 (114)
|-.|+.++. ...+..+.+.++..+.|=..+.+|
T Consensus 83 LY~y~~~~L~~A~~~~d~~~i~ev~~il~~L~ea 116 (145)
T 1vh6_A 83 XYDYXYRRLVQANIKNDTGXLAEVEGYVTDFRDA 116 (145)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 9999999999998869999999999999999999