BLAST/PSIBLAST alignment of GI: 254780522 and GI: 116250503 at iteration 1
>gi|116250503|ref|YP_766341.1| flagellar biosynthesis regulatory protein FlaF [Rhizobium leguminosarum bv. viciae 3841] Length = 115
>gi|115255151|emb|CAK06225.1| putative flagellar synthesis related protein [Rhizobium leguminosarum bv. viciae 3841] Length = 115
 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 62/115 (53%), Positives = 86/115 (74%), Gaps = 1/115 (0%)

Query: 1   MRQY-YHETIQESSIECRKREHWILDRSISLLSIAHKSLPNSKQAVEALFYTSRVWVVFI 59
           M Q+ Y E +Q+S  + ++RE  +LDRSI LLS+A +     ++A+EALFYT RVW+ FI
Sbjct: 1   MYQFSYAEVMQDSVADAKEREWQVLDRSIDLLSLAREKEKYGREAIEALFYTRRVWISFI 60

Query: 60  QDLVSEDNHLPQEVKLNLISIGLWVLKECERIRRNKSNSYQDIIDVISIVRDGLK 114
           +DL   DN L  E++ NLISI +W+LKEC+RIR+ +SN+YQ IIDV +I+RDGLK
Sbjct: 61  EDLKHPDNQLEIELRANLISIAIWILKECDRIRKRQSNNYQGIIDVTTIIRDGLK 115