RPSBLAST alignment for GI: 254780522 and conserved domain: COG5442

>gnl|CDD|35001 COG5442, FlaF, Flagellar biosynthesis regulator FlaF [Cell motility and secretion]. Length = 115

 Score =  114 bits (287), Expect = 5e-27
 Identities = 54/115 (46%), Positives = 80/115 (69%), Gaps = 1/115 (0%)

Query: 1   MRQYYHETIQESSIECRK-REHWILDRSISLLSIAHKSLPNSKQAVEALFYTSRVWVVFI 59
           M Q+ +  + E  +   K RE  +L RSI+LL  A     +S++A+EAL++T RVW  FI
Sbjct: 1   MYQFSYADVMEDGVASAKDRERQLLTRSIALLDAARAPGDDSREAIEALYFTRRVWTRFI 60

Query: 60  QDLVSEDNHLPQEVKLNLISIGLWVLKECERIRRNKSNSYQDIIDVISIVRDGLK 114
           +DL S DN LP E++ NLISIG+WVL+E E IR+ +SN+++ +I++  I+RDGLK
Sbjct: 61  EDLGSPDNQLPMELRANLISIGIWVLRESEAIRQGESNNFEGLIEITQIIRDGLK 115