HHsearch alignment for GI: 254780523 and conserved domain: PRK07192
>PRK07192 flgL flagellar hook-associated protein FlgL; Reviewed.
Probab=100.00 E-value=0 Score=385.20 Aligned_cols=297 Identities=18% Similarity=0.214 Sum_probs=244.7
Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988
Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357)
Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357)
T Consensus 1 MRIst~~~~~~~l~~l~~~~~~l~~~q~qlsSGkri~~~sDDp~~~~~~~~l~~~~~~~~q~~~N~~~a~~~l~~~d~aL 80 (305)
T PRK07192 1 MRISTNQLYSTMLRSIQQSQAGLMKLQQQMSTGKRILTPSDDPIASVRLLELNREQANIKQYRSNIANLSNSLSAQEGHL 80 (305)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 95656999999999999999999999999833785389423899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8899999999999985137888988999999999865677777765200-243041056654432122333332222222
Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSF 162 (357)
Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~~-~g~~~f~G~~~~~~p~~~~~~~~~~~~~~~ 162 (357)
T Consensus 81 ~~~~~il~r~rel~vqa~ngt~s~~dr~aia~Ei~~l~~~l~~~aNt~~~~G~ylF~G~~~~~~pf~~~~~~~~~~y~G~ 160 (305)
T PRK07192 81 SGVNDQLQSVRDLLVAAGNGSLSDEDRSAMATELRSMLDSLLGLANAKDSEGRYLFSGTASNTQPITFDPAGGKYTYNGN 160 (305)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEECCCCCEEEEECC
T ss_conf 99999999999999985068898267998888999989999999874142651353254356664133378870688448
Q ss_pred CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCC--
Q ss_conf 100010134543222456653211233322100123344444566543200111566520000025641022320353--
Q gi|254780523|r 163 DQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM-- 240 (357)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 240 (357)
T Consensus 161 ~--------------------------------------------------------~~~~~~i~~~~~~~~~~~g~~~f 184 (305)
T PRK07192 161 S--------------------------------------------------------DQRQVQVGEGVQLPVNVTLQSVF 184 (305)
T ss_pred C--------------------------------------------------------CCEEEEECCCEEEEECCCHHHHH
T ss_conf 7--------------------------------------------------------64478841670443045388875
Q ss_pred -----CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -----101123333321002334455511356677777899999999999999986689999999999899999999986
Q gi|254780523|r 241 -----RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 (357)
Q Consensus 241 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~ 315 (357)
T Consensus 185 ~~~~~~~f~~l-~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ld~a~~~v~~~~a~iGa~~nrle~~~~~~~~~~~~l~~~ 263 (305)
T PRK07192 185 EGGGLDVLNAL-DKLIDDLKTPTLPAGDPALTAAIDEALGAIDNALDNVLGTLTEVGSRQKELDLLQKNHEDMKLQNAKI 263 (305)
T ss_pred CCCCHHHHHHH-HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 25735689999-99998741666555433369999999999999999999999998599999999998899999999999
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
Q ss_conf 433327888999999999999999999999997368505209
Q gi|254780523|r 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 (357)
Q Consensus 316 ~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~SL~dyL 357 (357)
T Consensus 264 ~s~i~d~D~a~a~t~l~~~q~~~qAs~~~~a~i~~lSL~dyl 305 (305)
T PRK07192 264 LSDLQDLDYAEAYTDLSNQMAALEATQKTFVKVNSLSLFNLI 305 (305)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC
T ss_conf 877545579999999999999999999999988167387309