HHsearch alignment for GI: 254780523 and conserved domain: PRK08073

>PRK08073 flgL flagellar hook-associated protein FlgL; Validated.
Probab=100.00  E-value=0  Score=377.18  Aligned_cols=287  Identities=15%  Similarity=0.205  Sum_probs=240.1

Q ss_pred             CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             13218999999999999999999999999720220464212899999999999999999999999999999999999988
Q gi|254780523|r    4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL   83 (357)
Q Consensus         4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L   83 (357)
T Consensus         1 MRItt~~~~~~~l~~l~~~~~~l~~~q~qissGkki~~~sDDP~~~~~~~~l~~~~~~~~qy~~N~~~a~~~l~~~e~aL   80 (287)
T PRK08073          1 MRVSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLSMSEDPLAASKSFAIQHSLANIEQMQKDVADSKNVLTQTENTL   80 (287)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             90662999999999999999999999999853886798000899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             88999999999999851378889889999999998656777777652002430410566544321223333322222221
Q gi|254780523|r   84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFD  163 (357)
Q Consensus        84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~~~g~~~f~G~~~~~~p~~~~~~~~~~~~~~~~  163 (357)
T Consensus        81 ~~~~~~l~r~~el~vqa~ngt~s~~dr~aia~Ei~~l~~~l~~~aNt~~~G~ylF~G~~~~~~pf~~d~ty---~G----  153 (287)
T PRK08073         81 SGVSKSLTRVDQLVLQALNGTNDEKELKAIGAEIDQILKQVVYLANTKEQGRYIFGGDSAEKKPFTEDGTY---QG----  153 (287)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCC---CC----
T ss_conf             99999999999999987168999999999999999999999998527547831006865677860145554---37----


Q ss_pred             CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCCCHH
Q ss_conf             00010134543222456653211233322100123344444566543200111566520000025641022320353101
Q gi|254780523|r  164 QMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI  243 (357)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (357)
T Consensus       154 ------------------------------------------------------~~~~~~~~i~~~~~v~~~~~g~~~-~  178 (287)
T PRK08073        154 ------------------------------------------------------GTNDVNWRLNDGYEVKAFRNGEAL-L  178 (287)
T ss_pred             ------------------------------------------------------CCCCEEEECCCCEEEEEECCCHHH-H
T ss_conf             ------------------------------------------------------776603541676257730362167-6


Q ss_pred             HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             12333332100233445551135667777789999999999999998668999999999989999999998643332788
Q gi|254780523|r  244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE  323 (357)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD  323 (357)
T Consensus       179 ~~~~~~l~~l~~al-----~~~d~~~~~~~l~~~~~~~d~v~~~~a~vGar~nrle~~~~~~~~~~~~l~~~~S~ieD~D  253 (287)
T PRK08073        179 TPVIKTLKKMSDAM-----QKGDQKALQPLLEENKKNLDGIINRTTEVGSTMNTVETFKTILSEQNLALQENRKEIEDVD  253 (287)
T ss_pred             HHHHHHHHHHHHHH-----HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             78999999999987-----5777878999999999999999999999989999999999888889999999887755546


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
Q ss_conf             8999999999999999999999997368505209
Q gi|254780523|r  324 QHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL  357 (357)
Q Consensus       324 ~ae~~t~l~~~q~~~qas~~~~a~i~~~SL~dyL  357 (357)
T Consensus       254 ~Aeai~~l~~~~~~lqAal~~~aki~q~SL~dyl  287 (287)
T PRK08073        254 LAVAISDLAYINATYEATLKAVSTMSKTSILDYM  287 (287)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
T ss_conf             9999999999999999999999987055176219