HHsearch alignment for GI: 254780523 and conserved domain: PRK12688
>PRK12688 flagellin; Reviewed.
Probab=95.83 E-value=0.093 Score=27.13 Aligned_cols=84 Identities=13% Similarity=0.106 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 13566777778999999999999999866899999999998999999999864333278889999999999999999999
Q gi|254780523|r 264 GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYM 343 (357)
Q Consensus 264 ~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~ 343 (357)
T Consensus 792 Fidn~a~Nkvl~~lntAsstLrsqAsalGsNLsiVQ~RQDFsKnlInVLqTGssNLTlADtNEEAANSQALsTRqSiavS 871 (888)
T PRK12688 792 FIDNNATNAVLAKLSTASTTLRSQASAFGSNLSIVQARQDFSKSLINVLQTGSSNLTLADTNEEAANSQALSTRQSIAVS 871 (888)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 00141478899987777798887777634760356555577788888874476435224443555422455443578888
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780523|r 344 ITTK 347 (357)
Q Consensus 344 ~~a~ 347 (357)
T Consensus 872 ALsL 875 (888)
T PRK12688 872 ALSL 875 (888)
T ss_pred HHHH
T ss_conf 8866