Query gi|254780523|ref|YP_003064936.1| flagellar hook-associated protein FlgL [Candidatus Liberibacter asiaticus str. psy62] Match_columns 357 No_of_seqs 142 out of 3151 Neff 10.7 Searched_HMMs 39220 Date Sun May 29 23:19:04 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780523.hhm -d /home/congqian_1/database/cdd/Cdd.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 PRK08870 flgL flagellar hook-a 100.0 0 0 398.2 34.9 353 4-357 1-403 (403) 2 PRK12717 flgL flagellar hook-a 100.0 0 0 391.5 34.7 354 4-357 1-523 (523) 3 PRK06663 flagellar hook-associ 100.0 0 0 391.7 32.0 354 3-357 2-419 (420) 4 PRK07192 flgL flagellar hook-a 100.0 0 0 385.2 33.1 297 4-357 1-305 (305) 5 PRK12718 flgL flagellar hook-a 100.0 0 0 381.3 35.0 354 4-357 1-509 (510) 6 PRK07701 flgL flagellar hook-a 100.0 0 0 381.0 31.5 294 4-357 1-300 (301) 7 PRK08073 flgL flagellar hook-a 100.0 0 0 377.2 33.0 287 4-357 1-287 (287) 8 PRK08027 flgL flagellar hook-a 100.0 0 0 375.3 33.9 314 4-357 1-316 (317) 9 PRK08913 flgL flagellar hook-a 100.0 0 0 374.9 34.3 301 3-357 2-302 (302) 10 PRK06008 flgL flagellar hook-a 100.0 0 0 366.8 33.8 348 1-357 1-348 (348) 11 pfam07164 consensus 100.0 0 0 353.2 33.1 347 1-357 1-347 (347) 12 COG1344 FlgL Flagellin and rel 100.0 0 0 333.4 33.7 345 4-357 1-357 (360) 13 PRK06819 flagellin; Validated 100.0 0 0 315.1 33.1 347 3-351 1-362 (371) 14 PRK08869 flagellin; Reviewed 100.0 0 0 313.6 31.6 347 4-351 3-368 (377) 15 PRK12804 flagellin; Provisiona 100.0 0 0 312.5 30.2 290 4-351 1-298 (307) 16 PRK12803 flagellin; Provisiona 100.0 0 0 309.1 30.1 325 4-351 1-326 (335) 17 PRK12807 flagellin; Provisiona 100.0 0 0 307.2 30.2 277 4-351 1-278 (287) 18 PRK12802 flagellin; Provisiona 100.0 0 0 299.2 30.2 271 3-351 2-273 (282) 19 PRK12805 flagellin; Provisiona 100.0 0 0 295.7 30.6 276 4-351 1-277 (287) 20 PRK12808 flagellin; Provisiona 100.0 0 0 292.9 32.5 348 4-351 1-451 (460) 21 PRK08412 flgL flagellar hook-a 100.0 0 0 294.9 29.3 146 4-149 1-146 (777) 22 PRK13588 flagellin B; Provisio 100.0 0 0 286.9 32.1 345 4-351 3-505 (514) 23 PRK12806 flagellin; Provisiona 100.0 0 0 284.5 32.9 348 4-351 3-465 (475) 24 PRK08026 flagellin; Validated 100.0 0 0 282.6 32.2 138 4-141 3-141 (566) 25 PRK12584 flagellin A; Reviewed 100.0 0 0 282.6 31.9 347 4-351 3-501 (510) 26 PRK08411 flagellin; Reviewed 100.0 0 0 277.9 32.0 141 4-144 3-144 (573) 27 PRK13589 flagellin; Provisiona 100.0 0 0 275.8 32.0 141 4-144 3-144 (573) 28 TIGR02550 flagell_flgL flagell 100.0 4E-43 0 257.2 26.8 349 5-357 1-393 (393) 29 PRK12687 flagellin; Reviewed 100.0 3.4E-39 8.5E-44 235.4 29.1 297 3-351 1-302 (311) 30 pfam00669 Flagellin_N Bacteria 100.0 2.1E-33 5.4E-38 203.1 17.6 138 6-143 1-139 (139) 31 pfam00700 Flagellin_C Bacteria 99.8 2.1E-19 5.5E-24 125.2 10.4 84 274-357 1-84 (84) 32 PRK12688 flagellin; Reviewed 98.5 1.9E-07 5E-12 58.7 4.3 102 5-106 3-104 (888) 33 PRK07191 flgK flagellar hook-a 97.4 0.0064 1.6E-07 33.6 23.1 70 282-351 379-448 (456) 34 PRK07521 flgK flagellar hook-a 97.2 0.01 2.6E-07 32.5 26.7 70 282-351 404-473 (482) 35 PRK06799 flgK flagellar hook-a 97.0 0.018 4.6E-07 31.1 18.1 66 286-351 358-423 (431) 36 PRK06665 flgK flagellar hook-a 96.6 0.03 7.7E-07 29.9 9.5 71 281-351 548-618 (628) 37 PRK12714 flgK flagellar hook-a 96.6 0.035 9E-07 29.5 9.5 70 282-351 546-615 (624) 38 PRK06945 flgK flagellar hook-a 96.5 0.043 1.1E-06 29.0 9.5 71 281-351 571-641 (649) 39 PRK05683 flgK flagellar hook-a 96.4 0.048 1.2E-06 28.7 9.7 71 281-351 598-668 (676) 40 PRK12715 flgK flagellar hook-a 96.2 0.061 1.6E-06 28.1 9.7 70 282-351 571-640 (649) 41 PRK07739 flgK flagellar hook-a 96.1 0.07 1.8E-06 27.8 24.5 70 282-351 418-487 (500) 42 PRK08871 flgK flagellar hook-a 96.0 0.079 2E-06 27.5 9.7 71 281-351 548-618 (626) 43 TIGR02492 flgK_ends flagellar 95.9 0.083 2.1E-06 27.4 17.0 74 278-351 415-488 (495) 44 PRK12688 flagellin; Reviewed 95.8 0.093 2.4E-06 27.1 9.1 84 264-347 792-875 (888) 45 PRK08147 flgK flagellar hook-a 95.6 0.12 3E-06 26.6 28.3 72 280-351 468-539 (547) 46 PRK08471 flgK flagellar hook-a 85.7 1.9 4.8E-05 19.8 27.3 70 281-350 533-602 (612) 47 COG1256 FlgK Flagellar hook-as 83.3 2.5 6.2E-05 19.2 20.7 72 280-351 472-543 (552) 48 pfam06429 DUF1078 Domain of un 75.5 4.3 0.00011 17.9 3.9 31 321-351 2-32 (39) 49 PRK05681 flgC flagellar basal 63.0 8.4 0.00021 16.3 3.9 34 318-351 96-129 (139) 50 pfam10498 IFT57 Intra-flagella 62.0 8.8 0.00022 16.2 12.4 50 291-341 239-288 (355) 51 PRK12631 flgC flagellar basal 55.7 11 0.00029 15.5 3.9 35 317-351 95-129 (138) 52 PRK12632 flgC flagellar basal 54.0 12 0.00031 15.4 3.9 33 319-351 88-120 (130) 53 PRK12782 flgC flagellar basal 52.9 13 0.00032 15.3 3.9 36 316-351 93-128 (138) 54 TIGR01395 FlgC flagellar basal 50.0 11 0.00028 15.6 2.0 37 317-353 104-140 (147) 55 PRK12629 flgC flagellar basal 46.9 16 0.0004 14.7 3.9 36 316-351 91-126 (135) 56 PRK06802 flgC flagellar basal 45.0 17 0.00043 14.6 3.9 33 318-350 98-130 (141) 57 PRK12630 flgC flagellar basal 44.8 17 0.00044 14.5 3.9 35 317-351 100-134 (143) 58 PRK12628 flgC flagellar basal 41.0 20 0.0005 14.2 3.9 34 318-351 98-131 (140) 59 PRK06797 flgB flagellar basal 40.1 20 0.00052 14.1 3.8 26 322-347 99-124 (135) 60 PRK06664 fliD flagellar hook-a 39.5 21 0.00053 14.1 5.6 46 276-321 606-651 (684) 61 PRK06004 flgB flagellar basal 38.1 22 0.00056 13.9 4.2 26 322-347 89-114 (126) 62 PRK06798 fliD flagellar cappin 35.8 24 0.00061 13.7 5.5 47 275-321 361-407 (440) 63 PRK05682 flgE flagellar hook p 33.8 26 0.00066 13.5 2.0 27 320-346 375-401 (414) 64 PRK05680 flgB flagellar basal 30.5 29 0.00075 13.2 4.2 25 322-346 99-123 (137) 65 PRK12622 flgB flagellar basal 29.4 31 0.00079 13.1 4.3 27 321-347 99-125 (135) 66 PRK12621 flgB flagellar basal 29.0 31 0.0008 13.1 4.2 26 322-347 97-122 (136) 67 PRK12623 flgB flagellar basal 27.8 33 0.00084 13.0 4.3 25 322-346 96-120 (131) 68 PRK12624 flgB flagellar basal 26.8 34 0.00088 12.9 4.2 25 322-346 106-130 (143) 69 PRK13723 conjugal transfer pil 26.8 34 0.00088 12.9 7.4 16 275-290 373-388 (457) 70 PRK06003 flgB flagellar basal 26.7 35 0.00088 12.8 3.9 28 322-349 90-117 (126) 71 PRK12627 flgB flagellar basal 26.5 35 0.00089 12.8 4.2 15 327-341 96-110 (128) 72 PRK08724 fliD flagellar cappin 26.4 35 0.00089 12.8 4.7 46 276-321 613-658 (686) 73 PRK12685 flgB flagellar basal 25.5 36 0.00093 12.7 4.2 28 320-347 77-104 (116) 74 PRK12625 flgB flagellar basal 23.9 39 0.001 12.5 4.1 25 322-346 95-119 (132) 75 PRK12817 flgG flagellar basal 22.7 41 0.0011 12.4 3.8 32 319-350 220-251 (261) 76 PRK08032 fliD flagellar cappin 21.3 44 0.0011 12.2 7.8 70 275-345 389-458 (463) 77 PRK07182 flgB flagellar basal 20.5 46 0.0012 12.1 4.0 19 112-130 13-33 (148) 78 PRK12641 flgF flagellar basal 20.2 47 0.0012 12.1 3.9 30 320-349 209-238 (252) No 1 >PRK08870 flgL flagellar hook-associated protein FlgL; Reviewed Probab=100.00 E-value=0 Score=398.15 Aligned_cols=353 Identities=13% Similarity=0.167 Sum_probs=249.7 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) |||||+++|++++++|++.+.+|.++|+||||||||++|||||++++++++|+.++.++++|++|+..+.+||+++|++| T Consensus 1 MRIst~~~~~~~~~~l~~~~~~l~~~~eqlSTGkrI~~~sDDp~~~~~~~~l~~~~~~l~q~~~N~~~~~s~l~~ad~aL 80 (403) T PRK08870 1 MRISTAQMYQQSVNSMLDQQAKLSQLQQQLSSGKKLLTPSDDPVAAAQAVNLSQESALLDQYTKNINLARNRLQQEESTL 80 (403) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 95656999999999999999999999999740686488213899999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEECCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 8899999999999985137888988999999999865677777765200-243041056654432122333332222222 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSF 162 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~~-~g~~~f~G~~~~~~p~~~~~~~~~~~~~~~ 162 (357) .++.++|+|+||++++++||+++++||++++.|+.++++++++++|+++ .|+|+|+|.+.+++||.....+...+.... T Consensus 81 ~~~~~il~r~relavqaangt~~~~dr~ai~~E~~~l~~~i~~iaNt~~~~G~~lF~G~~~~t~pf~~~~~g~~~y~Gd~ 160 (403) T PRK08870 81 GSVEDLLQRARELVVQAGNGSLSDSDRQAIATELQGLRDQLLSLANSKDESGNYLFAGTQSGTQPFAFDASGNVVYSGDS 160 (403) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEECCCCCEEEECCC T ss_conf 99999999999999986246787056999999999999999999840554661220466666640443488745860576 Q ss_pred CCHHHCCCCCCCCCCCCCCCCCCC----------------CCCCCCCCC-CCCCCCCCCCCCCCCCCEEECCCC------ Q ss_conf 100010134543222456653211----------------233322100-123344444566543200111566------ Q gi|254780523|r 163 DQMLQGFLEENSKSLLAGQHLEVS----------------SMNAQQMTD-FIKQLEDKFSDDEYWANNWSNASD------ 219 (357) Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------ 219 (357) ..... .............+...+ ......... ...........+..+...+....+ T Consensus 161 ~~~~~-~v~~~~~v~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (403) T PRK08870 161 GQRQV-QVADSVTVATNDPGDEVFMSVPNGFGDYVPAAYAANTGSGLLVSVAKTTPSAPTNGDTYTITFGDTAGAPTYEV 239 (403) T ss_pred CCEEE-EECCCCEEEECCCHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCEEEE T ss_conf 52468-74155046504745777641346765201022234455532431010045555667634899831577513898 Q ss_pred --------------------------CCCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH Q ss_conf --------------------------520000025641022320353101123333321002334455511356677777 Q gi|254780523|r 220 --------------------------HNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKM 273 (357) Q Consensus 220 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (357) ..+......+..+...+......+..+.......................+..+ T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 319 (403) T PRK08870 240 TDSSTGTVVTAQAYDAGQPINFNGVEVQISGAPAAGDSFTLTPAAGVSIFDTLDDAIAALESPVDNSVSDAALQNELAQA 319 (403) T ss_pred ECCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH T ss_conf 50566531234444567612305548997035466642785147653199899999998636677643105568899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH Q ss_conf 89999999999999998668999999999989999999998643332788899999999999999999999999736850 Q gi|254780523|r 274 LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 (357) Q Consensus 274 ~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~SL 353 (357) +..|+.++++|...|+++|++++|||...++++....++++.++++||+|++|++++|++.|++|||++++++||.+||| T Consensus 320 l~~id~a~~~v~~~ra~lGa~~nrle~~~~~l~~~~~~l~~~~S~i~DaD~ae~~t~l~~~q~~~qAa~~~~aqi~q~SL 399 (403) T PRK08870 320 LTNLDNALNNVLTARASVGARLNELESYEAVHEDNKLVNTSALSSLEDLDYASAISEFEKQQAALQAAQQAFSKVQSLSL 399 (403) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH T ss_conf 99999999999999999859999999999888889999999876512547999999999999999999999998834517 Q ss_pred HHCC Q ss_conf 5209 Q gi|254780523|r 354 LNYL 357 (357) Q Consensus 354 ~dyL 357 (357) |||| T Consensus 400 ~dyL 403 (403) T PRK08870 400 FNYI 403 (403) T ss_pred HHHC T ss_conf 6209 No 2 >PRK12717 flgL flagellar hook-associated protein FlgL; Provisional Probab=100.00 E-value=0 Score=391.47 Aligned_cols=354 Identities=15% Similarity=0.148 Sum_probs=239.5 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) |||||+++|++.+++|++.+++|.+.++||||||||++|+|||++++++.+|+.++..++||.+|+..+.+||+++|++| T Consensus 1 MRIs~~~~~~~~~~nl~~~~~~l~~~~eqLSSGkrIn~asDDpag~a~~~~l~~~i~~l~Q~~~N~~~a~s~lq~aE~aL 80 (523) T PRK12717 1 MRISTAQFYESSAANYQRNYSNLVKTQEEISSGIRINTAADDPVGAARLLQLEQQQAMLDQYKGNITTIKNSLGQEETTL 80 (523) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 91636999999999999999999999998732686688113999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEECCCCCCCCCCCCCCCCCCCCC-CC Q ss_conf 8899999999999985137888988999999999865677777765200-243041056654432122333332222-22 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAK-KS 161 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~~-~g~~~f~G~~~~~~p~~~~~~~~~~~~-~~ 161 (357) .++.++|+|+||++||++||+++++||++|+.|+++++++|.+++|+++ +|+|+|+|.+.+.+||.....+...+. .. T Consensus 81 ~~v~~iLqr~reLavQaaNgt~s~~DR~ai~~Ei~ql~~el~~iaNtt~~nG~~lf~G~~~~~~pf~~~~~g~~~y~gd~ 160 (523) T PRK12717 81 NSINDVLQRARELAVSAGNGGLTDADRKAIASELKQIEAQLLGLMNSRDANGQYLFAGSKSDTPPYVRNADGTYSYQGDQ 160 (523) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEECCCCCEEEECCC T ss_conf 99999999999999987168999889999999999999999988604555762674576667664044588738985465 Q ss_pred CCCHHHC------CCCCCCCCCC--------------------------C-------------------------CCCCC Q ss_conf 2100010------1345432224--------------------------5-------------------------66532 Q gi|254780523|r 162 FDQMLQG------FLEENSKSLL--------------------------A-------------------------GQHLE 184 (357) Q Consensus 162 ~~~~~~~------~~~~~~~~~~--------------------------~-------------------------~~~~~ 184 (357) ....... .........+ . ..... T Consensus 161 ~~~~~~i~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (523) T PRK12717 161 TQLNLQVGDGLNLATNDTGYSAFEQAVNTSRTQSTLLSPATDDGRVGLSNGLVTSSTTYNAQFRAGEPYTLTFTSGTQFK 240 (523) T ss_pred CCEEEEECCCEEEECCCCCHHHHHHCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEE T ss_conf 52578740542331267406555420244432000123345665156403410133211244346752145530453147 Q ss_pred CCCCCCCCCC-------CCCCCCCC----------------------CCCCCCCCCCEEECCC----------------- Q ss_conf 1123332210-------01233444----------------------4456654320011156----------------- Q gi|254780523|r 185 VSSMNAQQMT-------DFIKQLED----------------------KFSDDEYWANNWSNAS----------------- 218 (357) Q Consensus 185 ~~~~~~~~~~-------~~~~~~~~----------------------~~~~~~~~~~~~~~~~----------------- 218 (357) .....+.... .+...... ...........+.... T Consensus 241 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (523) T PRK12717 241 ITDASGNDVTSEASGGGKFDPGTFGGQTISFRGVDLELNVNLKEGDDALPDAALAGHSFTLQSKPDTFTATRSPGNTSTA 320 (523) T ss_pred EECCCCCEEEEEECCCCEEECCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCEE T ss_conf 52156641234303552231135666247640312454201235665554322245203421455402331036775314 Q ss_pred ---CCCCEE-------ECCCCCCE-------------------------------------EEEEECCCCH--------- Q ss_conf ---652000-------00256410-------------------------------------2232035310--------- Q gi|254780523|r 219 ---DHNIKY-------RIKDTEGI-------------------------------------DVSANVNMRG--------- 242 (357) Q Consensus 219 ---~~~~~~-------~~~~~~~~-------------------------------------~~~~~~~~~~--------- 242 (357) ...+.. ....+..+ ...+...+.. T Consensus 321 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~g~~~~i~~~~~~g~~~~~~~~ 400 (523) T PRK12717 321 QVSGGSITDQAAYNSTFPSGGAVLKFTSATDYELYAQPVTADSKPVSSGTVTGNTATAAGVSFTLSGTPAAGDQFSVQVN 400 (523) T ss_pred EECCCCEECCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCCCCEEEEECC T ss_conf 64165200111123322578706872256642000033456653323452024411312237885256677864788227 Q ss_pred ---HHHHHHHHHHHCC-C----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf ---1123333321002-3----3445551135667777789999999999999998668999999999989999999998 Q gi|254780523|r 243 ---IRDIMFVAVIGTE-F----LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 (357) Q Consensus 243 ---~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~ 314 (357) ....+........ . .............+..++..|+.++++|...|+++|+++||||...+.++...++++. T Consensus 401 ~~~~~~i~~t~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~lGA~~Nrle~~~~~~~~~~~n~~~ 480 (523) T PRK12717 401 THQTQNILDTISQLRAALSTPTDGDPAASQALRAALASALGNLASAIDQVSTARSSIGARGNALDIQGTTNESLSLANTS 480 (523) T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 65553188899999998516666653677889999999999999999999999998858999999999989999999999 Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC Q ss_conf 6433327888999999999999999999999997368505209 Q gi|254780523|r 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 (357) Q Consensus 315 ~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~SL~dyL 357 (357) .+|+|||+||+|++++|++.|+.|||++++++|++|||||||| T Consensus 481 a~S~i~D~D~Ae~~t~lt~~qil~qAa~s~~aqi~qlSLfdyl 523 (523) T PRK12717 481 TQSSIRDSDPAEATTRLTLQQTMLEASQQAFVKISQLSLFNQL 523 (523) T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC T ss_conf 8887653039999999999999999999999998574186319 No 3 >PRK06663 flagellar hook-associated protein FlgL; Validated Probab=100.00 E-value=0 Score=391.69 Aligned_cols=354 Identities=15% Similarity=0.133 Sum_probs=237.0 Q ss_pred CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 61321899999999999999999999999972022046421289999999999999999999999999999999999998 Q gi|254780523|r 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAH 82 (357) Q Consensus 3 ~~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~ 82 (357) .+||||+++|++.+++|++.+++|.++|+||||||||++|||||++++++++|+.++..++||.+|+..+.+||+++|++ T Consensus 2 ~~RIst~~~~~~~~~~l~~~~~~l~~~qeqlSSGkrI~~~SDDP~~~a~~~~l~~~~~~~~Qy~~N~~~a~s~l~~~e~~ 81 (420) T PRK06663 2 INRISHPMQYNNLKFSLREQESKITKLLNQLQTGKRIRKLRDDPTGATHSIRLDSRLFKLNTYEKNIDTGRSRLQYAEGY 81 (420) T ss_pred CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 71406399999999999999999999999874248658933599999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEECCCCCCCCCCCCCCCCCCCC--- Q ss_conf 888999999999999851378889889999999998656777777652002-4304105665443212233333222--- Q gi|254780523|r 83 LSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLA--- 158 (357) Q Consensus 83 L~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~~~-g~~~f~G~~~~~~p~~~~~~~~~~~--- 158 (357) |+++.++|+|+|+++++++||+++++||++|+.|+.+++++|++++|++++ |.|+|+|.+...+||.......... T Consensus 82 L~~~~~il~r~relavqaaNgt~s~~dR~aia~Ei~~l~~~l~~iaNt~~~~G~~lF~G~~~~~~pf~~~~~~~~~~~~~ 161 (420) T PRK06663 82 LQSLGNILQRARELAVQGANGTYQGDDKKAIAKEIDELLEDLVAIANAKGADGYSLFSGTKIDREPFEPIESKIKGLQGD 161 (420) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC T ss_conf 99999999999999997426899867799999999999999999984055588464477137888764234443343332 Q ss_pred ------------CCCCCCHHHCCCCCCCCCCCCCCCCCC-------------CCCCCCCCCCCCCCCCCCCCCCCCCCCE Q ss_conf ------------222210001013454322245665321-------------1233322100123344444566543200 Q gi|254780523|r 159 ------------KKSFDQMLQGFLEENSKSLLAGQHLEV-------------SSMNAQQMTDFIKQLEDKFSDDEYWANN 213 (357) Q Consensus 159 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (357) +....................+..... ...........+.........+...... T Consensus 162 ~~~~~~~~i~y~G~~~~~~~~i~~~~~~~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 241 (420) T PRK06663 162 ELKNQIIGVEYNGNQGEQLTEIENGEYIPTNYPGNKVFWGQNQSITSSVDNSGFVVKEDTKIYIDGVEIHLTAGDTADDI 241 (420) T ss_pred CCCCCEEEEEECCCCCCCEEEECCCCEEEECCCCCCEEECCCCCCEECCCCCCCEECCCCEEEECCEEEEECCCCCHHHH T ss_conf 33553256785255430004403661563025752102225533000125654033146336631426751157518888 Q ss_pred EE--CCCCCCCEEECC-------CCCCEEEEEECCCCHHHHHHHH--------------------------HHHHCCCCC Q ss_conf 11--156652000002-------5641022320353101123333--------------------------321002334 Q gi|254780523|r 214 WS--NASDHNIKYRIK-------DTEGIDVSANVNMRGIRDIMFV--------------------------AVIGTEFLS 258 (357) Q Consensus 214 ~~--~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~ 258 (357) .. ......+..... .....+......+......... ........ T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~- 320 (420) T PRK06663 242 IAKINESSAPVKASLDPVLNSISISTTTPHQIWITDEEGSTVLRDLGLLTQNTKEPPYNLSNSAEVRGRSIFDVLIQLR- 320 (420) T ss_pred HHHHCCCCCCEEEEEECCCCCEEEECCCCCCEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH- T ss_conf 8751477752257630245541331156541355205664100012322345567764434333335523888899887- Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH Q ss_conf 45551135667777789999999999999998668999999999989999999998643332788899999999999999 Q gi|254780523|r 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKI 338 (357) Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~ 338 (357) ..............++..|+.+++++...|+++|+|++|++...++++....++++.+|++||+|++|++++|+++++.| T Consensus 321 ~~~~~~~~~~~~~~~l~~ld~a~~~v~~~ra~iGar~nrle~~~~~~~~~~~~l~~~~S~i~DaD~a~~it~l~~~~~~~ 400 (420) T PRK06663 321 DALIQNDQELIGGRDLAELDEALENILRRLADLGAKENRLERSYERISKEIMDMTEDMSKYTDLDVTKAITNLKMLELAH 400 (420) T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH T ss_conf 65532415656665899999999999999999879999999999988889999999886330523999999999999999 Q ss_pred HHHHHHHHHHHCCCHHHCC Q ss_conf 9999999997368505209 Q gi|254780523|r 339 EMSYMITTKLQKLSILNYL 357 (357) Q Consensus 339 qas~~~~a~i~~~SL~dyL 357 (357) ||++++|+||.++|||||| T Consensus 401 qAa~~~~a~i~~~SLfdyL 419 (420) T PRK06663 401 QVSLGVSAKIMKTTLLDFL 419 (420) T ss_pred HHHHHHHHHHCCCCHHHHC T ss_conf 9999999987066288760 No 4 >PRK07192 flgL flagellar hook-associated protein FlgL; Reviewed Probab=100.00 E-value=0 Score=385.20 Aligned_cols=297 Identities=18% Similarity=0.214 Sum_probs=244.7 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) |||||+++|++++++|++.+.+|.++|+||||||||++|||||+++.++++|+.++.++++|.+|+..+.+||+++|++| T Consensus 1 MRIst~~~~~~~l~~l~~~~~~l~~~q~qlsSGkri~~~sDDp~~~~~~~~l~~~~~~~~q~~~N~~~a~~~l~~~d~aL 80 (305) T PRK07192 1 MRISTNQLYSTMLRSIQQSQAGLMKLQQQMSTGKRILTPSDDPIASVRLLELNREQANIKQYRSNIANLSNSLSAQEGHL 80 (305) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 95656999999999999999999999999833785389423899999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEECCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 8899999999999985137888988999999999865677777765200-243041056654432122333332222222 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSF 162 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~~-~g~~~f~G~~~~~~p~~~~~~~~~~~~~~~ 162 (357) .++.++|+|+||+++++.||+++++||.+++.|+.++++++..++|+++ .|.|+|+|.+++.+||.....+....+... T Consensus 81 ~~~~~il~r~rel~vqa~ngt~s~~dr~aia~Ei~~l~~~l~~~aNt~~~~G~ylF~G~~~~~~pf~~~~~~~~~~y~G~ 160 (305) T PRK07192 81 SGVNDQLQSVRDLLVAAGNGSLSDEDRSAMATELRSMLDSLLGLANAKDSEGRYLFSGTASNTQPITFDPAGGKYTYNGN 160 (305) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEECCCCCEEEEECC T ss_conf 99999999999999985068898267998888999989999999874142651353254356664133378870688448 Q ss_pred CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCC-- Q ss_conf 100010134543222456653211233322100123344444566543200111566520000025641022320353-- Q gi|254780523|r 163 DQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM-- 240 (357) Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 240 (357) . ......+..+..+.....+.. T Consensus 161 ~--------------------------------------------------------~~~~~~i~~~~~~~~~~~g~~~f 184 (305) T PRK07192 161 S--------------------------------------------------------DQRQVQVGEGVQLPVNVTLQSVF 184 (305) T ss_pred C--------------------------------------------------------CCEEEEECCCEEEEECCCHHHHH T ss_conf 7--------------------------------------------------------64478841670443045388875 Q ss_pred -----CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf -----101123333321002334455511356677777899999999999999986689999999999899999999986 Q gi|254780523|r 241 -----RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 (357) Q Consensus 241 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~ 315 (357) ..+..+ .........+............+..+++.|+.++++|...|+++|++++|||...++++....++++. T Consensus 185 ~~~~~~~f~~l-~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ld~a~~~v~~~~a~iGa~~nrle~~~~~~~~~~~~l~~~ 263 (305) T PRK07192 185 EGGGLDVLNAL-DKLIDDLKTPTLPAGDPALTAAIDEALGAIDNALDNVLGTLTEVGSRQKELDLLQKNHEDMKLQNAKI 263 (305) T ss_pred CCCCHHHHHHH-HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 25735689999-99998741666555433369999999999999999999999998599999999998899999999999 Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC Q ss_conf 433327888999999999999999999999997368505209 Q gi|254780523|r 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 (357) Q Consensus 316 ~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~SL~dyL 357 (357) ++++||+|++|++++|++.|++|||++++|+||.+||||||| T Consensus 264 ~s~i~d~D~a~a~t~l~~~q~~~qAs~~~~a~i~~lSL~dyl 305 (305) T PRK07192 264 LSDLQDLDYAEAYTDLSNQMAALEATQKTFVKVNSLSLFNLI 305 (305) T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC T ss_conf 877545579999999999999999999999988167387309 No 5 >PRK12718 flgL flagellar hook-associated protein FlgL; Provisional Probab=100.00 E-value=0 Score=381.31 Aligned_cols=354 Identities=14% Similarity=0.091 Sum_probs=243.5 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) |||||.++|++.+++|.+.|++|.++|+||+|||||.+|||||+++++++.++..+..+++|.+|+..+++||...|++| T Consensus 1 MRISt~~~~~~~~~~~~~~q~~l~~~q~qlssGkri~~psDDPvaa~~~~~l~~~~~~~~qy~~N~~~a~~~L~~~e~~L 80 (510) T PRK12718 1 MRLSTALIYQNGLNGVLNQEAAMARLQEQLSSGRRVLTPADDPLAAALAVNVSQTSSMNSNYDANRKQAEQALGAQTNTL 80 (510) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 93536999999999999999999999999850786688210999999999999999999999999999999999899999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEECCCCCCCCCCCCC-CCC-CCCCCC Q ss_conf 8899999999999985137888988999999999865677777765200-2430410566544321223-333-322222 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGY-FTK-DSLAKK 160 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~~-~g~~~f~G~~~~~~p~~~~-~~~-~~~~~~ 160 (357) .++.++|+|+||++++|.||+++++||++|+.|+++++++|+.++|+++ .|.|+|+|.+++++||... ..+ ..+.+. T Consensus 81 ~~v~~~l~~~~el~v~a~ngt~s~~dr~aia~El~~~~~~l~~laNs~d~~G~ylFaG~~~~t~Pf~~~~~~G~~~Y~Gd 160 (510) T PRK12718 81 QSVVKNMQEMLKRVVEAGNGTMSDADRQALVIALKGAREELVGLANATDGNGQYLFSGYKGFTQPYSFDAATGKVTYNGD 160 (510) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEECCCCCEEEEECC T ss_conf 99999999999999985178889788999999999999999999646587887744673578998313489851898257 Q ss_pred CCCCHHHC------CCCCCCCCCCCC------------------CC---------CCCCCCCCCC--------------- Q ss_conf 22100010------134543222456------------------65---------3211233322--------------- Q gi|254780523|r 161 SFDQMLQG------FLEENSKSLLAG------------------QH---------LEVSSMNAQQ--------------- 192 (357) Q Consensus 161 ~~~~~~~~------~~~~~~~~~~~~------------------~~---------~~~~~~~~~~--------------- 192 (357) ........ .........+.. .+ .......+.. T Consensus 161 ~gq~~~qv~~~~~~~~~d~G~~vF~~v~~g~~~~~~~a~~~ntg~g~~s~vs~d~~~~~~~~g~~~~i~ft~~~~td~~~ 240 (510) T PRK12718 161 LGQRGIQVDQSRLMSGGDVGSDIFNSVTSGTLAYIADAGAGNAGTGQYSAVSFDGPRAGNYVGRDFRIEFTRDAVTDELQ 240 (510) T ss_pred CCCEEEEECCCEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCC T ss_conf 76246873576366347776123102467874432466655667774321002564444446765310102233455422 Q ss_pred --------------------------CCCC------CCC-----CCCCCCCCCCCCCEEE-------------------- Q ss_conf --------------------------1001------233-----4444456654320011-------------------- Q gi|254780523|r 193 --------------------------MTDF------IKQ-----LEDKFSDDEYWANNWS-------------------- 215 (357) Q Consensus 193 --------------------------~~~~------~~~-----~~~~~~~~~~~~~~~~-------------------- 215 (357) ...+ +.. .......+..|..... T Consensus 241 ~~v~~~~~~~~~~~~~~~n~~~~~g~~i~~~gv~~~l~g~~~~gd~~t~~~~~~~~~~~~~~~~~t~s~~~t~~s~~d~~ 320 (510) T PRK12718 241 YSVLSDPPVVPPEQPLPANMPYSEGSVIDMNGVSIKLSGQPEAGDVFTVETPKSWKMGVQGDAANTGSATLTPVSLPDGL 320 (510) T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 20014665555444444556666663011145213421466667511102566443344556677664433444566665 Q ss_pred ----------CCCCCCC---------------EEECCCCC-----CEEEEEECC------------CCHHHHHHHHHHHH Q ss_conf ----------1566520---------------00002564-----102232035------------31011233333210 Q gi|254780523|r 216 ----------NASDHNI---------------KYRIKDTE-----GIDVSANVN------------MRGIRDIMFVAVIG 253 (357) Q Consensus 216 ----------~~~~~~~---------------~~~~~~~~-----~~~~~~~~~------------~~~~~~~~~~~~~~ 253 (357) ....... ......+. .+.+.+... ......++..+..+ T Consensus 321 ~~~~~~~~~~~~ga~g~~~~~t~~~~~~~~~~~~~~~~G~~i~~~Gv~~~i~G~Pa~GDsf~v~~~~~~~~~vf~Tl~~l 400 (510) T PRK12718 321 TGKNLSVAFLDDGAGGLLYSVTSTPPDPSLPANVPVKPGDVIDIGGLKVKVDGQPAAGDTYAVTTPKSANVDVFDTLNDL 400 (510) T ss_pred CCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHH T ss_conf 56653112114776631320234677766555555577760453444897446768886233227875545599999999 Q ss_pred CCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH Q ss_conf 0233-----44555113566777778999999999999999866899999999998999999999864333278889999 Q gi|254780523|r 254 TEFL-----SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAH 328 (357) Q Consensus 254 ~~~~-----~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~ 328 (357) .... ..........+.+..+++.|+.++++|...|+++|+|+|+||...+.++...+.++..+|++||+||+|++ T Consensus 401 i~aL~tp~~~~~~~~~~~~~~l~~al~~ld~a~~~v~~~ra~vGaRlN~ld~~~~~~~~~~l~~~~~lS~leDlD~aeAi 480 (510) T PRK12718 401 IGALDTPISGDPQAAAALANTLATANKKLNLSLDNVLTVQASVGARLNELEALGNTGAQKGLSYVKQLSDLEDVNIYQAT 480 (510) T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH T ss_conf 99984857798789999999999999989999999999999887888899999865476787999988750236899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHCC Q ss_conf 99999999999999999997368505209 Q gi|254780523|r 329 AQLSTLINKIEMSYMITTKLQKLSILNYL 357 (357) Q Consensus 329 t~l~~~q~~~qas~~~~a~i~~~SL~dyL 357 (357) ++|++.|+.|||++++|+||++||||||| T Consensus 481 s~l~~qq~~LQAaQqsF~ki~~LSLFn~~ 509 (510) T PRK12718 481 SDLLLRQVALQAASLALQRIQGNSLFSMG 509 (510) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCC T ss_conf 99999999999999999998656511146 No 6 >PRK07701 flgL flagellar hook-associated protein FlgL; Validated Probab=100.00 E-value=0 Score=381.04 Aligned_cols=294 Identities=15% Similarity=0.174 Sum_probs=240.0 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) |||+|+++|++++++|++.+.+|.++++||||||||++|||||++++++++|+.++.++++|.+|+..+.+||+++|++| T Consensus 1 MRIst~~~~~~~~~~l~~~~~~l~~~~~qlsSGkri~~~sDDp~~~~~~~~l~~~~~~~~q~~~N~~~a~s~l~~~e~~L 80 (301) T PRK07701 1 MRVTQGMIANNSLRNINKSLEKLDKYQEQLSTGKKITKPSDDPVVAMKSLRYRTDLAQVEQYQRNASDAKNWLENTESAL 80 (301) T ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 97164999999999999999999999998733685278010899999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 88999999999999851378889889999999998656777777652002430410566544321223333322222221 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFD 163 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~~~g~~~f~G~~~~~~p~~~~~~~~~~~~~~~~ 163 (357) .++.++|+|+||++++++||++++++|.+++.|+.++++++..++|++++|+|+|+|.+.+.+||.....+......... T Consensus 81 ~~~~~~l~r~rel~vqa~ngt~s~~dr~~ia~E~~~l~~~l~~~aNt~~~G~ylF~G~~~~~~pf~~~~~~~~~~~~~~~ 160 (301) T PRK07701 81 NEATDILQRARELAVQAANGTNTEEDRQAIAQEIEQLKDQLIQIANTQVNGRYIFNGTNTDTPPVTENGDGTYTFENSTD 160 (301) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEECCCCCCEEEEECCC T ss_conf 99999999999999986059998777999999999889999999705517813205755677640117876145663167 Q ss_pred CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCC--- Q ss_conf 00010134543222456653211233322100123344444566543200111566520000025641022320353--- Q gi|254780523|r 164 QMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM--- 240 (357) Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 240 (357) . ......+.++..+...+.+.. T Consensus 161 ~-------------------------------------------------------~~~~~~i~~g~~~~~n~~g~~~f~ 185 (301) T PRK07701 161 S-------------------------------------------------------SDVKIEISKGVKINVNVDGNSAFG 185 (301) T ss_pred C-------------------------------------------------------CEEEEEECCCCEEEECCCHHHHHC T ss_conf 6-------------------------------------------------------306888427715773155487642 Q ss_pred ---CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf ---10112333332100233445551135667777789999999999999998668999999999989999999998643 Q gi|254780523|r 241 ---RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 (357) Q Consensus 241 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s 317 (357) ......+........ .........+..+++.|+.++++|...|+++|++++||+...++++...+++++.++ T Consensus 186 ~~~~~~~~i~~~l~~~~~-----~l~~~~~~~~~~~l~~id~a~~~v~~~ra~~Ga~~nrle~~~~~~~~~~~~l~~~~s 260 (301) T PRK07701 186 GDSGGGQNLFEMLDNLEN-----ALESGTHTGVSNALGDIDQFINNVLAERAELGARSNRLELIENRLSDQEINATKLLS 260 (301) T ss_pred CCCCCCHHHHHHHHHHHH-----HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 435553049998999998-----742677889999999999999999999998618999999999889999999999988 Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC Q ss_conf 3327888999999999999999999999997368505209 Q gi|254780523|r 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 (357) Q Consensus 318 ~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~SL~dyL 357 (357) +++|+|+++++++|++.|++|||+++++++|.++|||||| T Consensus 261 ~i~D~D~a~a~~~l~~~q~~~qAa~~~~a~i~q~SL~dyl 300 (301) T PRK07701 261 DNEDVDLAEVITDLKTQENVYRAALAVGARIIQPSLVDFL 300 (301) T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC T ss_conf 7755459999999999999999999999988356098870 No 7 >PRK08073 flgL flagellar hook-associated protein FlgL; Validated Probab=100.00 E-value=0 Score=377.18 Aligned_cols=287 Identities=15% Similarity=0.205 Sum_probs=240.1 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) |||||+++|++++++|+..+.+|.++|+||+|||||++|||||+++.++++++.+++++++|.+|+..+.+||+++|++| T Consensus 1 MRItt~~~~~~~l~~l~~~~~~l~~~q~qissGkki~~~sDDP~~~~~~~~l~~~~~~~~qy~~N~~~a~~~l~~~e~aL 80 (287) T PRK08073 1 MRVSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLSMSEDPLAASKSFAIQHSLANIEQMQKDVADSKNVLTQTENTL 80 (287) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 90662999999999999999999999999853886798000899999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 88999999999999851378889889999999998656777777652002430410566544321223333322222221 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFD 163 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~~~g~~~f~G~~~~~~p~~~~~~~~~~~~~~~~ 163 (357) +++.++|+|+||++++++||++++++|++++.|+++++++++.++|++++|+|+|+|.+.+.+||...... .+ T Consensus 81 ~~~~~~l~r~~el~vqa~ngt~s~~dr~aia~Ei~~l~~~l~~~aNt~~~G~ylF~G~~~~~~pf~~d~ty---~G---- 153 (287) T PRK08073 81 SGVSKSLTRVDQLVLQALNGTNDEKELKAIGAEIDQILKQVVYLANTKEQGRYIFGGDSAEKKPFTEDGTY---QG---- 153 (287) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCC---CC---- T ss_conf 99999999999999987168999999999999999999999998527547831006865677860145554---37---- Q ss_pred CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCCCHH Q ss_conf 00010134543222456653211233322100123344444566543200111566520000025641022320353101 Q gi|254780523|r 164 QMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 (357) Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (357) ....+...+.++..+.....+... + T Consensus 154 ------------------------------------------------------~~~~~~~~i~~~~~v~~~~~g~~~-~ 178 (287) T PRK08073 154 ------------------------------------------------------GTNDVNWRLNDGYEVKAFRNGEAL-L 178 (287) T ss_pred ------------------------------------------------------CCCCEEEECCCCEEEEEECCCHHH-H T ss_conf ------------------------------------------------------776603541676257730362167-6 Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 12333332100233445551135667777789999999999999998668999999999989999999998643332788 Q gi|254780523|r 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE 323 (357) Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD 323 (357) ..++.......... .....+.+...++.++.++++|...++++|++++||+...+++++..+.+++.+|++||+| T Consensus 179 ~~~~~~l~~l~~al-----~~~d~~~~~~~l~~~~~~~d~v~~~~a~vGar~nrle~~~~~~~~~~~~l~~~~S~ieD~D 253 (287) T PRK08073 179 TPVIKTLKKMSDAM-----QKGDQKALQPLLEENKKNLDGIINRTTEVGSTMNTVETFKTILSEQNLALQENRKEIEDVD 253 (287) T ss_pred HHHHHHHHHHHHHH-----HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 78999999999987-----5777878999999999999999999999989999999999888889999999887755546 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC Q ss_conf 8999999999999999999999997368505209 Q gi|254780523|r 324 QHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 (357) Q Consensus 324 ~ae~~t~l~~~q~~~qas~~~~a~i~~~SL~dyL 357 (357) ++|++++|++.+++|||++++|+||.++|||||| T Consensus 254 ~Aeai~~l~~~~~~lqAal~~~aki~q~SL~dyl 287 (287) T PRK08073 254 LAVAISDLAYINATYEATLKAVSTMSKTSILDYM 287 (287) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC T ss_conf 9999999999999999999999987055176219 No 8 >PRK08027 flgL flagellar hook-associated protein FlgL; Reviewed Probab=100.00 E-value=0 Score=375.34 Aligned_cols=314 Identities=14% Similarity=0.139 Sum_probs=244.1 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) |||||.++|++++++|++.+.+|.++|+||+|||||.+|||||+++.+++.|+..++.+++|.+|+..+.+||...|++| T Consensus 1 MRIst~~~~~~~~~~l~~~~~~l~~~q~qlssGk~i~~~SDDP~~~~~~~~l~~~~~~~~qy~~n~~~a~~~l~~~e~~L 80 (317) T PRK08027 1 MRLSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLARTFATQKVSLEESVL 80 (317) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 91766999999999999999999999999860786688101999999999999999999999999999999999899999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEECCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 8899999999999985137888988999999999865677777765200-243041056654432122333332222222 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSF 162 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~~-~g~~~f~G~~~~~~p~~~~~~~~~~~~~~~ 162 (357) +++.++++|+|++++++.||++++++|++++.|+++++++++.++|+++ .|+|+|+|++++++||......+....... T Consensus 81 ~~~~~~l~~~rel~v~a~n~t~~~~~r~a~a~ei~~l~~~l~~~aN~~~~~G~ylF~G~~~~t~Pf~~~~~~y~G~~~~~ 160 (317) T PRK08027 81 SQVTTAIQSAQEKIVYAGNGTLSDDDRASLATDLQGLRDQLLNLANTTDGNGRYIFAGYKTEKAPFDEATGGYVGGTESI 160 (317) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCE T ss_conf 99999999999999975068998778999999999999999999726476886445887789998406898723787664 Q ss_pred CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCCCH Q ss_conf 10001013454322245665321123332210012334444456654320011156652000002564102232035310 Q gi|254780523|r 163 DQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG 242 (357) Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (357) ...............+..++..+.... ...+......... T Consensus 161 ------------~~~v~~~~~~~~~~~G~~vf~~~~~~~----------------------------~~~~~~~~~~~~i 200 (317) T PRK08027 161 ------------TQQVDAARSMVIGHTGDQIFDSITSNA----------------------------VPEPDGSASETNL 200 (317) T ss_pred ------------EEECCCCCEEEECCCCHHHHHCCCCCC----------------------------CCCCCCCCCCCCH T ss_conf ------------463167632440577115550266566----------------------------5688888652329 Q ss_pred HHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 112333332100-2334455511356677777899999999999999986689999999999899999999986433327 Q gi|254780523|r 243 IRDIMFVAVIGT-EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 (357) Q Consensus 243 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~d 321 (357) +..+........ ...............+...+..|+.++++|...|+++|+|++|||...+.+++..+.+++.++++|| T Consensus 201 f~~ld~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~l~~a~~~v~~~~a~iG~r~n~le~~~~~~~~~~l~~~~~~S~~eD 280 (317) T PRK08027 201 FAMLDTAIAALKTPVAGSDADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLGSDRALGQKQQMSDLVD 280 (317) T ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 99999999987274568840156899999999999999999999999999899999999997667799899999876136 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC Q ss_conf 888999999999999999999999997368505209 Q gi|254780523|r 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 (357) Q Consensus 322 aD~ae~~t~l~~~q~~~qas~~~~a~i~~~SL~dyL 357 (357) +|++|++++|++.|++|||++++|+||.+||||||| T Consensus 281 ~D~aeaisel~~~q~alqAa~~~faki~~lSLfd~l 316 (317) T PRK08027 281 VDWNSAISSYVMQQAALQASYKTFTDMQGMSLFQLN 316 (317) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC T ss_conf 589999999999999999999999998347398760 No 9 >PRK08913 flgL flagellar hook-associated protein FlgL; Validated Probab=100.00 E-value=0 Score=374.90 Aligned_cols=301 Identities=14% Similarity=0.197 Sum_probs=265.4 Q ss_pred CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 61321899999999999999999999999972022046421289999999999999999999999999999999999998 Q gi|254780523|r 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAH 82 (357) Q Consensus 3 ~~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~ 82 (357) +|||||++++++++++|++.|.+|.++++|||||||+++|+|||.++.+++.|+.+++++++|++|+..+.+||..+|++ T Consensus 2 ~MRist~~~~~~~l~~i~~~q~~l~~~q~qlsTGk~~~~~sddp~~~~~~l~l~~~~~~~~qy~~n~~~a~~~l~~~~~a 81 (302) T PRK08913 2 IMRVATFANSSQMIAGALRTQQTMASLQIQESSGLKSESFAGLGASAQQAVNLQVSVTRAQSYIDAATLAQSKVEVMYSA 81 (302) T ss_pred CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 15754599999999999999999999999971487378866478999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 88899999999999985137888988999999999865677777765200243041056654432122333332222222 Q gi|254780523|r 83 LSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF 162 (357) Q Consensus 83 L~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~~~g~~~f~G~~~~~~p~~~~~~~~~~~~~~~ 162 (357) |++|.++++++|++++++.|++. .++.+++.|+++++++++.++|++++|+|+|+|.+++++||........... T Consensus 82 L~~~~~~~~~~~~l~v~a~~~t~--~~~~a~a~e~~~~~~~lv~~~Nt~~~GrYlFsGt~t~t~P~~~~~~~~~~~~--- 156 (302) T PRK08913 82 VSQIADLVQQLRSSLSAASTGTS--TDATSAASSAQQALTQMASLLNTQYGGQYVFAGADTTTAPVDFSSFASVAGD--- 156 (302) T ss_pred HHHHHHHHHHHHHHHHHHCCCCH--HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEECCCCCCCCC--- T ss_conf 99999999999999986148985--5799999999999999999860744986255170289887321576655677--- Q ss_pred CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCCCH Q ss_conf 10001013454322245665321123332210012334444456654320011156652000002564102232035310 Q gi|254780523|r 163 DQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG 242 (357) Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (357) .+......++.+.+......+..+..+...+.+++.. T Consensus 157 -------------------------------------------~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~a~~~~ 193 (302) T PRK08913 157 -------------------------------------------SASSADTSYYVGDDELTSVRVSATQSVAYGVTADNSA 193 (302) T ss_pred -------------------------------------------CCCCCCCEEEECCCCEEEEEECCCCEEECCCCCCCHH T ss_conf -------------------------------------------7765553277358725788855874032377888478 Q ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 11233333210023344555113566777778999999999999999866899999999998999999999864333278 Q gi|254780523|r 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGV 322 (357) Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~da 322 (357) +..++......... .......+...++.|+.++++|...++++|++++|||...++|+.....+++.++++||+ T Consensus 194 ~~~~~~~l~~~~~~------~~~~~~~~~~~~~~l~~a~~~l~~~~a~lG~~~~rle~~~~~~~~~~~~l~~~~s~ledv 267 (302) T PRK08913 194 FEDVMRALMLVANS------SSLSSSTLSSALDLASTATDDLGDVQSRLSNAASRITAASSLQTEYKSFAETLLGDLTDV 267 (302) T ss_pred HHHHHHHHHHHHCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 99999999976447------875479999999999999999999999980999999999987899999999998863575 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC Q ss_conf 88999999999999999999999997368505209 Q gi|254780523|r 323 EQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 (357) Q Consensus 323 D~ae~~t~l~~~q~~~qas~~~~a~i~~~SL~dyL 357 (357) |++|++++|++.|++|||+|++++||.+||||||| T Consensus 268 D~aea~t~l~~~~~~lqAs~~~~ari~qlSL~dyL 302 (302) T PRK08913 268 DVAAVTAQLSTYQAQLTASYSAISKMKSLNLASYL 302 (302) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC T ss_conf 99999999999999999999999986056086209 No 10 >PRK06008 flgL flagellar hook-associated protein FlgL; Validated Probab=100.00 E-value=0 Score=366.76 Aligned_cols=348 Identities=31% Similarity=0.467 Sum_probs=318.4 Q ss_pred CCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 97613218999999999999999999999999720220464212899999999999999999999999999999999999 Q gi|254780523|r 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQ 80 (357) Q Consensus 1 m~~~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e 80 (357) |+++.|||..+++.+++++.+.|.+|.++++|++|||+.+.++++|.++.+++.|+.++.++++|++++..+..||..++ T Consensus 1 m~~~~Ist~~~~~~lr~~~~~~q~~l~~~~~E~sTG~~ad~~~~lg~~~~~~~~l~~~~~~~~~~~~~~~~~~~rl~~~q 80 (348) T PRK06008 1 MKTSFISTYALQNALRLTIAKLQAELVKAQTEATTGRYADVGLSLGSKTGRSVSLRREYDRLASLTDSNSLVTQRLTATQ 80 (348) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 97500128999999999999999999999998713710565431126689999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCC Q ss_conf 98888999999999999851378889889999999998656777777652002430410566544321223333322222 Q gi|254780523|r 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKK 160 (357) Q Consensus 81 ~~L~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~~~g~~~f~G~~~~~~p~~~~~~~~~~~~~ 160 (357) .+|++|.+.++++++.++.+.++..+ ...+..++++.+++++..+|++++|+|+|+|..++++|+............ T Consensus 81 ~aL~~i~~~~~~~~~~l~~~~~~~~~---~~~~~~~a~~~l~~lv~~lNt~~~G~yLFaG~~tdt~P~~d~~~~~s~~~~ 157 (348) T PRK06008 81 TALGQLIDAAQSFLNDLLAANASAET---GSVVAQSARSALSSLTSTLNTSVNGEYLFAGINTDVKPLTDYTAPGSAAKT 157 (348) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHH T ss_conf 99999999999999999824688860---889999999999999998726538852226867898875334567652024 Q ss_pred CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCC Q ss_conf 22100010134543222456653211233322100123344444566543200111566520000025641022320353 Q gi|254780523|r 161 SFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 (357) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (357) ........... ...........++.++..+++.++...+.+.+|...|+.+.+..+..++..++.+...+.+++ T Consensus 158 ~~d~~~~~~~~------~~~~~~~~a~it~~~~~~~~~~~~~~~f~~~~~~~~~s~as~~~~~~~I~~~~~v~~s~~An~ 231 (348) T PRK06008 158 AVDTAFQTFFG------FAQDDPAVSNITAAQMQTFLDGTFAPLFNDANWSANWSSASDTNITSRISPTETAETSTSANA 231 (348) T ss_pred HHHHHHHHHHC------CCCCCCCHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCC T ss_conf 47777765403------677762043200566643304642113467630114355777652101378863303667886 Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 10112333332100233445551135667777789999999999999998668999999999989999999998643332 Q gi|254780523|r 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 (357) Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~ 320 (357) .+++.+.................+.....+..++..|+.+++++...|+++|.+++|++...++++.....++..++++| T Consensus 232 ~~~r~~~~~~~~~a~~~~~~l~~~a~~~~~~~a~~~l~~a~~~l~~~ra~lG~~q~rie~a~~r~~~~~~~l~~~~s~le 311 (348) T PRK06008 232 EGFRKLAMAYVMVSELGDIGLSSEAQQTVTDKAITLTGQAITGLTTQQATLGLAQSRVKKANTRLDAQIKLLKGQILDLE 311 (348) T ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 88999999999985025788986789999999999999999999999998659999999999989999999999987421 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC Q ss_conf 7888999999999999999999999997368505209 Q gi|254780523|r 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 (357) Q Consensus 321 daD~ae~~t~l~~~q~~~qas~~~~a~i~~~SL~dyL 357 (357) |+|++|++++|+++|++|||+|++++||++|||+||| T Consensus 312 ~vD~~Ea~t~l~~~q~qLeasy~~tarl~~LSL~nyL 348 (348) T PRK06008 312 GVDPYEASTRVNALQTQIETSYSLTSQLQQLSLVNYL 348 (348) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHC T ss_conf 7689999999999999999999999998513297419 No 11 >pfam07164 consensus Probab=100.00 E-value=0 Score=353.23 Aligned_cols=347 Identities=29% Similarity=0.459 Sum_probs=312.3 Q ss_pred CCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 97613218999999999999999999999999720220464212899999999999999999999999999999999999 Q gi|254780523|r 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQ 80 (357) Q Consensus 1 m~~~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e 80 (357) |+++.|||..+++.++.++.+.|.+|.++++|++|||+.+.++++|.++.+++.|+.++.++++|++++..+..||..++ T Consensus 1 m~~~~ist~~~~~~~r~~~~r~Q~~l~~~~~E~sTG~~ad~~~~lg~~~~~~~~L~~~~~~l~~~~~~~~~a~~rl~~~q 80 (347) T pfam07164 1 MKASFISTLALQNAMRSTILKNQAELVKAQTEATTGRHADVGLALGARTARSVSLRRDLDRLSVLVDTNSLVTQRLAATQ 80 (347) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 96520218988989999999999999999998703820564001033389999899999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCC Q ss_conf 98888999999999999851378889889999999998656777777652002430410566544321223333322222 Q gi|254780523|r 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKK 160 (357) Q Consensus 81 ~~L~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~~~g~~~f~G~~~~~~p~~~~~~~~~~~~~ 160 (357) ++|++|.+.++++++.++.+.++..+. ..++.+.++.+++++..+|++++|+|+|+|..++.+|+..+.++...... T Consensus 81 ~aL~~i~~~~~~~~~~l~~~~~~~~~~---~~~~~~a~~~l~~li~~LNt~~~GryLFaG~~Td~~Pl~~~~~~~~~~~~ 157 (347) T pfam07164 81 TALGQMAEAAQEFLKDLVTATSSDAPT---LTVVSQASSALQNFTSALNTSFNGEYLFAGINTDVKPIDDYADGSAAKNA 157 (347) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHH---HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCH T ss_conf 999999999999999998406898517---99999999999999999843508852326867898865245767532000 Q ss_pred CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCC Q ss_conf 22100010134543222456653211233322100123344444566543200111566520000025641022320353 Q gi|254780523|r 161 SFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 (357) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (357) .. ..... ..............++.....++..++...+....|...|..+.+..+..++..++.+...+.+++ T Consensus 158 ~~-~~~~~------~~~~~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~~~~s~~s~~~~~~~is~~e~~~~~~~An~ 230 (347) T pfam07164 158 VD-TAFAA------AFGFAQTDPSVASITKAQMEDFLTTTFAAQFNDAFWATNWSKASDQNMTSRISTTEVADTSTSANS 230 (347) T ss_pred HH-HHHHH------HHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC T ss_conf 23-68888------760367870154411777765533543212455420145555777765510368844630465772 Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 10112333332100233445551135667777789999999999999998668999999999989999999998643332 Q gi|254780523|r 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 (357) Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~ 320 (357) .+++.+.....+.................+..++..|+.+++++...|+++|++++|+|...++++..+..++..++++| T Consensus 231 ~~~r~~~~~~~~~~~~~~~~ls~~~~~~~~~~a~~~l~~a~~~l~~~~a~lG~~q~rie~a~~r~~~~~~~l~~~~~~le 310 (347) T pfam07164 231 DGFRKFALAAVMVMELMDPKLSSEAFDMVVTKALGLIGQAITGLTQEQSTLGLSQSRVSKATTSLKAQQKILNTHILDLE 310 (347) T ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 88999999999987325778787899999999999999999999999998638998899999989999999999987411 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC Q ss_conf 7888999999999999999999999997368505209 Q gi|254780523|r 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 (357) Q Consensus 321 daD~ae~~t~l~~~q~~~qas~~~~a~i~~~SL~dyL 357 (357) |+|++|++++|+.+|++||++|++++||++|||+||| T Consensus 311 ~vD~aEa~trl~~~q~qLeasy~vtarl~~LSL~nyL 347 (347) T pfam07164 311 GVDPYEASTRVNTLQTQIETSYSLTSRLQKMSLINYL 347 (347) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 6589999999999999999999999998342397409 No 12 >COG1344 FlgL Flagellin and related hook-associated proteins [Cell motility and secretion] Probab=100.00 E-value=0 Score=333.37 Aligned_cols=345 Identities=16% Similarity=0.140 Sum_probs=242.7 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) +||+|++.+..++++++..+.+|.+.++|||||+||++|+|||+++.++.+|+.++.+|++|.+|+..+.++|+++|++| T Consensus 1 mrI~tn~~a~~~~~~l~~~~~~l~k~~~rlSSG~rI~~a~Ddaa~~~is~~l~~~~~~L~q~~~n~~~g~s~lqtae~aL 80 (360) T COG1344 1 MRINTNMAALNALRNLNKNQSELAKSQERLSSGLRINSASDDAAGLAIALRLRSQIRGLSQAKDNAQDGISKLQTAEGAL 80 (360) T ss_pred CEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 96032999999999999999999999998523531478240589999999999999988999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEECCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 889999999999998513788898899999999986567777776520-0243041056654432122333332222222 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT-DEGQYLFSGINSSEKPLNGYFTKDSLAKKSF 162 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~-~~g~~~f~G~~~~~~p~~~~~~~~~~~~~~~ 162 (357) +++.++|+|+||++|++.||++++.||.+++.|+.++++++..++|++ ++|.|+|+|.+++ +||.....+........ T Consensus 81 ~~~~~~lqrirelavqaan~t~s~~dr~~iq~Ei~~l~~el~~iAntt~fnG~~lf~G~~t~-~p~~~~~~~~~~~~~~~ 159 (360) T COG1344 81 SEISKILQRIKELAVQAANGTLSDADRAAIQKEIEQLLDELDNIANTTSFNGEYLFAGSKTD-KPFDFQNAGGETIKGSF 159 (360) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC-CCCEECCCCCCEEEECC T ss_conf 99999999999999986369999899999999999999999999852665885654776788-87200268762356303 Q ss_pred CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCC---CCEEE----CCCCCCCEEE--CCCCCC Q ss_conf 100010134543222456653211233322100123--344444566543---20011----1566520000--025641 Q gi|254780523|r 163 DQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK--QLEDKFSDDEYW---ANNWS----NASDHNIKYR--IKDTEG 231 (357) Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~----~~~~~~~~~~--~~~~~~ 231 (357) ...... ............................. ............ ...+. .......... ...+.. T Consensus 160 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (360) T COG1344 160 NSDSSG-TVSVGLDITNTGDLSFTSLGTTAKDEPIDAGDVTAGPTNLFGAGANAADGASLGKALDAATTNTQIGANVGQT 238 (360) T ss_pred CCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC T ss_conf 345544-3400144665430110135653222455543221356543323332211011353111110110002223443 Q ss_pred EEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 02232035310112333332100233445551135667777789999999999999998668999999999989999999 Q gi|254780523|r 232 IDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 (357) Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~ 311 (357) ......... ....... ..................++..+|.+++++...|+++|++++|++...+++....++ T Consensus 239 ~~~~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~id~Al~~i~~~ra~lGa~qnrl~~~~~~l~~~~~n 311 (360) T COG1344 239 TTLNINDGN-----VMTASAA--GALADPGSSVATADGAQAALGTIDSALDNITSARAELGAVQNRLESAINNLSNQSDN 311 (360) T ss_pred EEECCCCCC-----HHHHHHH--HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 000245320-----1456543--344035543110446887999999999999999998738999999999889889999 Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC Q ss_conf 9986433327888999999999999999999999997368505209 Q gi|254780523|r 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 (357) Q Consensus 312 l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~SL~dyL 357 (357) ++..+++|+|+||+|++++|+++|+++|+++++++++++++|++|+ T Consensus 312 l~~~~s~i~D~D~aee~t~l~~~q~~~Qas~~~laqan~~s~~~l~ 357 (360) T COG1344 312 LTAAESRIVDVDMAEESTELTKLQILQQASLQALAQANQLSLLVLS 357 (360) T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9998864007769999999999999999999999999860288897 No 13 >PRK06819 flagellin; Validated Probab=100.00 E-value=0 Score=315.13 Aligned_cols=347 Identities=10% Similarity=0.013 Sum_probs=225.5 Q ss_pred CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 61321899999999999999999999999972022046421289999999999999999999999999999999999998 Q gi|254780523|r 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAH 82 (357) Q Consensus 3 ~~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~ 82 (357) +++|.|+..+...+++|++.+..|.+.++||||||||++|+|||++++++.+|+.++..+++|.+|+..+.+||+++|++ T Consensus 1 m~~IntN~~A~~a~~~L~~~~~~l~ks~~rLSSG~rIn~asDDaAg~aia~~~~~~i~~l~q~~~N~~~~~s~lqtae~a 80 (371) T PRK06819 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEGA 80 (371) T ss_pred CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 98686369999999999999999999999852216637710148899999999999988999999899999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEECCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 8889999999999998513788898899999999986567777776520-024304105665443212233333222222 Q gi|254780523|r 83 LSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT-DEGQYLFSGINSSEKPLNGYFTKDSLAKKS 161 (357) Q Consensus 83 L~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~-~~g~~~f~G~~~~~~p~~~~~~~~~~~~~~ 161 (357) |.++.++|+|+||+++++.||++++.||+.+..|+.+++++|.+++|.+ |+|.++|.|......++...... ... .. T Consensus 81 L~~i~~iLqRmRELavqAaNgt~s~~DR~~i~~Ei~ql~~ei~~ia~~t~fnG~~ll~g~~~~~~qvg~~~~~-~i~-i~ 158 (371) T PRK06819 81 LNEINNNLQRVRELTVQAQNGSNSASDLDSIQDEINQRLAEIDRVSDQTDFNGVKVLAENTTMSIQVGANDGE-TID-IN 158 (371) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCCC-EEE-EE T ss_conf 9999999999999999744677776789999999999999999998756788875017887524763277873-699-85 Q ss_pred CCCHHHCCCCCCCCCCCCCCCCCC----------CCCCCCCCCCCCCCCCCCCCCCCCCCCEE-ECCCCCCCEEECCCCC Q ss_conf 210001013454322245665321----------12333221001233444445665432001-1156652000002564 Q gi|254780523|r 162 FDQMLQGFLEENSKSLLAGQHLEV----------SSMNAQQMTDFIKQLEDKFSDDEYWANNW-SNASDHNIKYRIKDTE 230 (357) Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 230 (357) ........................ ............................. ................ T Consensus 159 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (371) T PRK06819 159 LQKIDSKSLGLGSYSVSGVSGALTSLTDTSVTGVTTTTALDFSDISTFAAGATVHGIGDVGTDGAYADGYVVRYFTTDGK 238 (371) T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC T ss_conf 04344432245543335655542110233443322221111222100001100233221000012245520110123443 Q ss_pred CEEEE---EECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 10223---203531011233333210023344555113566777778999999999999999866899999999998999 Q gi|254780523|r 231 GIDVS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQN 307 (357) Q Consensus 231 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~ 307 (357) ..... .....................................++..||.+++.|...|+++|++++|||+..++++. T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~al~~iD~Ai~~v~~~Ra~lGA~qNrle~~~~nl~~ 318 (371) T PRK06819 239 QYKGEVDATNGKVTFADDANGDPIDDATALEAAAQFSPAGKATASPLETLDDALKQVDGLRSSLGAVQNRFESTVTNLNN 318 (371) T ss_pred CCCCCCCCCCCCEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 10000123445300002234420000010134332001577899899999999999999999872999999999998999 Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 99999986433327888999999999999999999999997368 Q gi|254780523|r 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 308 ~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) ..++++..+|+|+|+||++++++|.+.|+.+|++.+++++..+. T Consensus 319 ~~~nl~aa~s~I~DaD~A~E~t~l~k~qil~Qa~~amLaqANq~ 362 (371) T PRK06819 319 TVTNLTSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQV 362 (371) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 99999997532773039999999999999999999999997707 No 14 >PRK08869 flagellin; Reviewed Probab=100.00 E-value=0 Score=313.60 Aligned_cols=347 Identities=10% Similarity=0.004 Sum_probs=225.9 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) .+|.|+......+++|++.+..|.+.++||||||||++|+|||++++++.+|+.++.+++++.+|+..+.+||+++|++| T Consensus 3 ~~IntN~~a~~a~~~L~~~~~~l~~s~~rLSSG~rIn~asDDaag~aia~~l~~~i~~l~q~~~N~~~~~s~lqtae~aL 82 (377) T PRK08869 3 VNVNTNVSAMTAQRNLNGATSALNQSMERLSSGKRINSAKDDAAGLQISNRLTTQIRGLDVAVRNANDGISIAQTAEGAM 82 (377) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 57826199999999999999999999998611066478201689999999999999999999998999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEECCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 889999999999998513788898899999999986567777776520-0243041056654432122333332222222 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT-DEGQYLFSGINSSEKPLNGYFTKDSLAKKSF 162 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~-~~g~~~f~G~~~~~~p~~~~~~~~~~~~~~~ 162 (357) .++.++|+|+||++|+++||++++.||+++..|+.+++++|.+++|.+ |+|.|+|.|..... +|.............. T Consensus 83 ~~i~~iL~RmrELavqaaNgt~s~~DR~ai~~Ei~~L~~ei~~ian~t~fnG~~Ll~G~~~~~-~~q~g~~~g~~~~~~~ 161 (377) T PRK08869 83 NETTNILQRMRDLSLQSANGSNSASDRQALQEEVTALNDELNRIAETTSFGGTKLLNGSFGTK-SFQIGANSGEAVSLDL 161 (377) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC-EEECCCCCCCEEEEEE T ss_conf 999999999999999763465555579999999999999999999865548877424777660-2621467884599850 Q ss_pred CCH-HHCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCC---------CCCCCCCCCCCCEEECCCCCCCEEECCCCC Q ss_conf 100-0101345432224566532112--3332210012334---------444456654320011156652000002564 Q gi|254780523|r 163 DQM-LQGFLEENSKSLLAGQHLEVSS--MNAQQMTDFIKQL---------EDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 (357) Q Consensus 163 ~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (357) ... ...................... ....+........ ................+........+.... T Consensus 162 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (377) T PRK08869 162 SNMRSDAKIMGGASYVAEEGKDKDWTVSGDNSGLTLSFTDKGGEAQSININAKAGDDIEELATYINGQTDAVGASVTEDG 241 (377) T ss_pred CCCCHHHHCCCCEEEECCCCCCCCCEECCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC T ss_conf 43201121367514522554455420014665326874036665225787325551378888875155543135641575 Q ss_pred CEEEEEECCCCHHHHH-----HHHHHH-HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 1022320353101123-----333321-0023344555113566777778999999999999999866899999999998 Q gi|254780523|r 231 GIDVSANVNMRGIRDI-----MFVAVI-GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 (357) Q Consensus 231 ~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~ 304 (357) ................ ...... ..........+.........++..||.++++|...|+++|+++||||...++ T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~tt~~~a~~ai~~iD~Ai~~v~~~ra~lGA~~NrLe~~~~~ 321 (377) T PRK08869 242 KLQLFAANSSATGDLSFSGALAAELGLGNKGPVTVDDLDISTVGGAQQAVAVIDAALKYVDSHRADLGAFQNRFTHAINN 321 (377) T ss_pred EEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 16886125544443000310222211244431112210012253399999999999999999999872899999999999 Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 99999999986433327888999999999999999999999997368 Q gi|254780523|r 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 305 l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) ++...++++..+|.|+|+||++++++|++.|+.+|++.+++++..+. T Consensus 322 l~~~~~n~~aa~S~I~DaD~A~E~t~l~k~qil~Qa~~amLaqANq~ 368 (377) T PRK08869 322 LQNISENLSASNSRIKDTDFAKETTELTKAQILQQAGTSILAQAKQA 368 (377) T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 99999999987423351319999999999999999999999997317 No 15 >PRK12804 flagellin; Provisional Probab=100.00 E-value=0 Score=312.53 Aligned_cols=290 Identities=12% Similarity=0.038 Sum_probs=219.5 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) |||+|++.....+++|++.+.+|.++|+||||||||++|+|||++++++++|+.++.++++|.+|+..+.+||+++|++| T Consensus 1 mrIt~n~~a~~al~~L~~~~~~l~~~q~rLSSGkrI~~asDDpa~~aia~~l~s~~~~~~~~~~N~~~a~s~l~tad~al 80 (307) T PRK12804 1 MRINHNIAALNTLNRLSANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMASKNAQDGISLIQTAEGAL 80 (307) T ss_pred CEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 95624299999999999999999999998541176377421799999999999999999999998999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHH-------HCCCCEEECCCCCCCCCCCCCCCCC Q ss_conf 8899999999999985137-8889889999999998656777777652-------0024304105665443212233333 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLE-GKTDNNKFPINAGMLRDSYESFVTFANM-------TDEGQYLFSGINSSEKPLNGYFTKD 155 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n-~t~~~~d~~~~a~e~~~~~~~l~~~aN~-------~~~g~~~f~G~~~~~~p~~~~~~~~ 155 (357) .++.++|+|+||++++++| |++++.||.+++.|+.++++++..++|. .|+|.++|.|.....+|........ T Consensus 81 ~~~~~il~R~rELavqaaN~Gt~s~~dr~ai~~Ei~~L~~qi~~~~n~~~i~~~t~f~G~~~~~g~~~~~~~~~~~~~~~ 160 (307) T PRK12804 81 TETHSILQRVRELVVQAGNTGTQDGTDLGAIQEEIKALVDEIGNGTDKNGISDRTEFNGKKLLDGTFKPAAPAAGTKSLT 160 (307) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCEE T ss_conf 99999999999999985367778888999999999999999974303340231042078761256654567677776169 Q ss_pred CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEE Q ss_conf 22222221000101345432224566532112333221001233444445665432001115665200000256410223 Q gi|254780523|r 156 SLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVS 235 (357) Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (357) ...+...... +............ +...... T Consensus 161 ~~~g~~~~~~---------------------------~~v~~~~~~~~~~-----------------------~~~~~~~ 190 (307) T PRK12804 161 FQIGANAAQQ---------------------------LSVNIEAMSADAL-----------------------GVKDADG 190 (307) T ss_pred EEECCCCCCE---------------------------EEEEEEECCCHHH-----------------------CCCCCCC T ss_conf 9854777643---------------------------7887542330231-----------------------3555554 Q ss_pred EECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 20353101123333321002334455511356677777899999999999999986689999999999899999999986 Q gi|254780523|r 236 ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 (357) Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~ 315 (357) ........... ...............+...+..|+.++++|...|+++|++++||+...++++....+++.. T Consensus 191 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~id~al~~v~~~ra~lGA~~nrle~~~~~l~~~~~nl~~~ 262 (307) T PRK12804 191 TLVTGKSVSDI--------DVTKFADIAADADGGFDDQLDIVDGAIKQVSDQRSKLGAVQNRLEHTINNLGASSENLTAA 262 (307) T ss_pred CCCCCCCCCHH--------HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 21234210000--------2233200011001007889999999999999999886899999999998899999999998 Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 433327888999999999999999999999997368 Q gi|254780523|r 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 316 ~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) +|+++|+||++++++|+++|+.+||+.++.++..+. T Consensus 263 ~s~i~DaD~A~e~~~l~~~qi~~Qaa~a~laqAN~~ 298 (307) T PRK12804 263 ESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQ 298 (307) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 743560069999999999999999999999998266 No 16 >PRK12803 flagellin; Provisional Probab=100.00 E-value=0 Score=309.06 Aligned_cols=325 Identities=10% Similarity=0.006 Sum_probs=222.3 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) ++|.|+......+++|.+.+..|.+.++||||||||++|+|||++++++.+|+.++.+++++.+|+.++.+||+++|++| T Consensus 1 ~~IntN~~a~~A~~~l~~~~~~l~~s~~rLSSG~RInsa~DDaAGlaIa~~l~sqi~~l~qa~rNa~daiS~lqtaegal 80 (335) T PRK12803 1 MIINHNTSAINASRNNSINAANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKAINFIQTTEGNL 80 (335) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 96726799999999999999999999998510066477421588999999999999989999853988999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 8899999999999985137888988999999999865677777765-200243041056654432122333332222222 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFAN-MTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF 162 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN-~~~~g~~~f~G~~~~~~p~~~~~~~~~~~~~~~ 162 (357) .++.++|+|||||+||++||++++.||.++..|+.++.++|.++++ ++|+|.++|.|......+......+........ T Consensus 81 ~ei~~iLqRmrELavqAaNgT~s~~dr~~i~~E~~qL~~eI~~Ia~~T~fNg~~ll~g~~~~~~~~~~~~~~~~~~~~~~ 160 (335) T PRK12803 81 NEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSAAQNVRTAEELGMQPAKINT 160 (335) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC T ss_conf 99999999999999985367899899999999999999999999984836886144676533231117650654223565 Q ss_pred CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCCCH Q ss_conf 10001013454322245665321123332210012334444456654320011156652000002564102232035310 Q gi|254780523|r 163 DQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG 242 (357) Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (357) ....... ..........+......+.. ........ ....+.+.........+...........+. T Consensus 161 ~~~~~~~----------~~~~t~~~~~g~~~~~~~~~----~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 225 (335) T PRK12803 161 PASLSGS----------QASWTLRVHVGANQDEAIAV----NIYAANVA-NLFSGEGAQQAAPVQEGAQQEGAQAAPAPA 225 (335) T ss_pred CCCCCCC----------CCCEEEEEEECCCCCCEEEE----EEEECHHH-HHHCCCCCHHHHHHHCCCCCCCCCCCCCCC T ss_conf 2211355----------55236899863777633788----53200366-654145520111110011001100012200 Q ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 11233333210023344555113566777778999999999999999866899999999998999999999864333278 Q gi|254780523|r 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGV 322 (357) Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~da 322 (357) .... ..................++..||.+++.|...|+++|+.++|||+..+.+....++++..+|+|+|+ T Consensus 226 -------~~~~-~~g~~~~~~i~t~~~A~~ai~~iD~Ai~~v~~~Ra~lGA~qNRLe~~~~nl~~~~~Nl~aa~SrI~Da 297 (335) T PRK12803 226 -------AAPA-QGGVNSPVNVTTTVDANMSLAKIENAIRMISDQRANLGAFQNRLESIKASTEYAIENLKASYAQIKDA 297 (335) T ss_pred -------CCCC-CCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH T ss_conf -------0001-35654543000086599999999999999999999870899999999989999999999975315630 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 88999999999999999999999997368 Q gi|254780523|r 323 EQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 323 D~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) |||+++++|.+.|+..|++.+++++..+. T Consensus 298 D~A~E~~~ltk~qil~Qa~~amLaQAN~~ 326 (335) T PRK12803 298 TMTDEVVASTTNSILTQSAMAMIAQANQV 326 (335) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 59999999999999999999999997617 No 17 >PRK12807 flagellin; Provisional Probab=100.00 E-value=0 Score=307.21 Aligned_cols=277 Identities=10% Similarity=0.051 Sum_probs=225.9 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) +||.|++.....+.+|++.+.+|.+.++||||||||++|+|||++++.+.+|+.++.++++|.+|+..+.+||+++|++| T Consensus 1 mrIntN~~a~~a~~~l~~~~~~l~~~~~rlSSG~rIn~asDD~ag~aia~~l~s~~~~~~~~~~N~~~a~s~l~tad~al 80 (287) T PRK12807 1 MRINTNINSMRTQEYMRQNQDKMNVSMNRLSSGKRINSAADDAAGLAIATRMRARQSGLEKASQNTQDGMSLIRTAESAM 80 (287) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 95514299999999999999999999998600166478553799999999999999989999988998999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 889999999999998513788898899999999986567777776-5200243041056654432122333332222222 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFA-NMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF 162 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~a-N~~~~g~~~f~G~~~~~~p~~~~~~~~~~~~~~~ 162 (357) .++.++|+|+||+++++.||++++.||.++..|+.+++++|..++ |++|+|.++|.|......|+.............. T Consensus 81 ~~i~~il~RmrELavqa~n~t~s~~dR~ai~~E~~~L~~~i~~Ia~nt~fnG~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (287) T PRK12807 81 NSVSNILTRMRDIAVQSSNGTNTAENQSALQKEFAELQEQIDYIAKNTEFNDKNLLAGTGAVTIGSTSISGAEISIETLD 160 (287) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCEEEEEECC T ss_conf 99999999999999987447998888999999999999999999985738987402788765454435677526787412 Q ss_pred CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCCCH Q ss_conf 10001013454322245665321123332210012334444456654320011156652000002564102232035310 Q gi|254780523|r 163 DQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG 242 (357) Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (357) .. ... ...... .. ... T Consensus 161 ~~-------------------------~~~-----------------~~~~~~----------~~------------~~~ 176 (287) T PRK12807 161 SS-------------------------ATN-----------------QQITIK----------LA------------NTT 176 (287) T ss_pred CC-------------------------CCC-----------------CEEEEE----------EC------------CCC T ss_conf 56-------------------------666-----------------337887----------41------------331 Q ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 11233333210023344555113566777778999999999999999866899999999998999999999864333278 Q gi|254780523|r 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGV 322 (357) Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~da 322 (357) ...+ .. ..................+..|+.++++|...|+.+|++++||+...+.+.....+++..+|+++|+ T Consensus 177 ~~~~----~~---~~~~~~~~~~~~~~a~~~l~~id~ai~~v~~~ra~lGA~~nrle~~~~~l~~~~~~l~~~~S~i~Da 249 (287) T PRK12807 177 AEKL----GI---DATTSNISISGAASALAAISALNTALNTVAGNRATLGATLNRLDRNVENLNNQATNMASAASQIEDA 249 (287) T ss_pred HHHH----CC---CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 3442----32---3323433345477799999999999999999999989999999999989999999999998877710 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 88999999999999999999999997368 Q gi|254780523|r 323 EQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 323 D~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) ||++++++|.++|+.+||+.+++++..+. T Consensus 250 D~A~e~~~l~~~qil~Qaa~a~lsqAN~~ 278 (287) T PRK12807 250 DMAKEMSEMTKFKILNEAGISMLSQANQT 278 (287) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 49999999999999999999999998467 No 18 >PRK12802 flagellin; Provisional Probab=100.00 E-value=0 Score=299.19 Aligned_cols=271 Identities=14% Similarity=0.065 Sum_probs=220.3 Q ss_pred CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 61321899999999999999999999999972022046421289999999999999999999999999999999999998 Q gi|254780523|r 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAH 82 (357) Q Consensus 3 ~~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~ 82 (357) .+||.|++.+...+++|++.+.+|.+.++||||||||++|+|||++++.+++|+.++..+++|.+|+..+.+||+++|++ T Consensus 2 ~m~I~tN~~a~~a~~~L~~~~~~l~~s~~rlSSGkri~~~sDDpa~~a~a~~l~s~~~~~~q~~~N~~~a~s~l~~ad~a 81 (282) T PRK12802 2 ALTVNTNITSLTVQKNLSRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRQTSQIRGQTQAIKNANDGISIAQTAEGA 81 (282) T ss_pred CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 71783769999999999999999999999872205516764449999999999999998999998899999899999999 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCEEECCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 888999999999999851378889889999999998656777777652-0024304105665443212233333222222 Q gi|254780523|r 83 LSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANM-TDEGQYLFSGINSSEKPLNGYFTKDSLAKKS 161 (357) Q Consensus 83 L~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~-~~~g~~~f~G~~~~~~p~~~~~~~~~~~~~~ 161 (357) |.++.++|+|+||++++++|++++++||.+++.|+.++++++..++|. +++|.|+|.|.....+ |.......... T Consensus 82 L~~i~~~l~R~reLavqaan~t~s~~dr~ai~~Ei~~L~~qi~~ian~t~fnG~~lf~g~~~~~~-~~vg~~~~~~~--- 157 (282) T PRK12802 82 LQESTNILQRMRELAVQSRNDSNDSTDRAALNKEFTTMLDEITRIATSTTLNGKNLLDGSAGTMT-FQVGANTGQSN--- 157 (282) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEE-EEECCCCCCEE--- T ss_conf 99999999999999997623789999999999999999999999987462788530058887557-87647888604--- Q ss_pred CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCCC Q ss_conf 21000101345432224566532112333221001233444445665432001115665200000256410223203531 Q gi|254780523|r 162 FDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 (357) Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (357) .+.......+. ...... T Consensus 158 ------------------------------~~~~~~~~~~~---------------------------------~~~~~~ 174 (282) T PRK12802 158 ------------------------------QITFGLSASFD---------------------------------ATGLGV 174 (282) T ss_pred ------------------------------EEEEEECCCCC---------------------------------CCCCCC T ss_conf ------------------------------78752012235---------------------------------434243 Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 01123333321002334455511356677777899999999999999986689999999999899999999986433327 Q gi|254780523|r 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 (357) Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~d 321 (357) . ................+...+..|+.++++|...|+++|++++||+...+++.....+++..+++++| T Consensus 175 ~-----------~~~~~~~~~~~~~~~~~~~~l~~id~ai~~v~~~ra~~Ga~~nrle~~~~~l~~~~~nl~~~~s~i~D 243 (282) T PRK12802 175 G-----------SGTLITGADSAAAETNAQAAITAIDAALQTINTTRADLGAAQNRLQSTISNLQNINENASAARGRVQD 243 (282) T ss_pred C-----------HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 2-----------02331244221105469999999999999999999987499889999998899999999998766660 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 888999999999999999999999997368 Q gi|254780523|r 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 322 aD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) +|+++++++|++.|+.+||+++++++..+. T Consensus 244 aD~A~e~~~l~~~qi~~Qaa~a~laqANq~ 273 (282) T PRK12802 244 TDFAAETAQLTKQQTLQQASTSVLAQANQL 273 (282) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 059999999999999999999999999676 No 19 >PRK12805 flagellin; Provisional Probab=100.00 E-value=0 Score=295.68 Aligned_cols=276 Identities=12% Similarity=0.104 Sum_probs=217.6 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) +||.|++.+...+++|++.+.+|.+.++||||||||++|+|||++++++.+|+.++.++++|.+|+..+.+||+++|++| T Consensus 1 mrIntN~~a~~a~~~L~~~~~~l~~s~~rLSSG~rIn~asDDaag~aia~~l~s~~~~~~q~~~N~~da~s~lqtad~aL 80 (287) T PRK12805 1 MKVNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAASKNSSMGIDLLQTADSAL 80 (287) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 95545499999999999999999999998602355167431699999999999999989999988999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEECCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 889999999999998513788898899999999986567777776520-0243041056654432122333332222222 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT-DEGQYLFSGINSSEKPLNGYFTKDSLAKKSF 162 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~-~~g~~~f~G~~~~~~p~~~~~~~~~~~~~~~ 162 (357) .++.++|+|+||++|+++||+++++||.++..|+.++.++|..+++++ |+|.++|.|......+............. T Consensus 81 ~~i~~iL~RmreLavqaangt~s~~dr~~i~~Ei~~L~~~i~~ia~~t~fng~~ll~~~~~~~~~~~~~~~~~~~~~~-- 158 (287) T PRK12805 81 SSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELDHVADTTNYNNIKLLDQTATGAATQVSIQASDKANDL-- 158 (287) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEEEECCCCCCE-- T ss_conf 998999999999999755788887889999999999999999998735678852557777777424787514776623-- Q ss_pred CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCCCH Q ss_conf 10001013454322245665321123332210012334444456654320011156652000002564102232035310 Q gi|254780523|r 163 DQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG 242 (357) Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (357) ... ... ...+.. . ....... + T Consensus 159 -------------~~~-----~~~--~~~~~~-----------~---~~~~~~~--~----------------------- 179 (287) T PRK12805 159 -------------INI-----DLF--NAKGLS-----------A---GTITLGS--G----------------------- 179 (287) T ss_pred -------------EEE-----ECC--CCCCCC-----------C---CCCCCCC--C----------------------- T ss_conf -------------676-----402--223444-----------2---2200255--4----------------------- Q ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 11233333210023344555113566777778999999999999999866899999999998999999999864333278 Q gi|254780523|r 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGV 322 (357) Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~da 322 (357) ...................++..||.+++.|...|+++|++++||+...+++.....+++..+|+++|+ T Consensus 180 -----------~~~~~~~~~~~~~~~~a~~a~~~id~ai~~v~~~ra~lGA~~NrLe~~~~~l~~~~~nl~~~~S~i~Da 248 (287) T PRK12805 180 -----------STVAGYSALSVADADSSQEATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKASASSIEDA 248 (287) T ss_pred -----------CCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf -----------200010000012477899999999999999999999999999999999999999999999987537722 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 88999999999999999999999997368 Q gi|254780523|r 323 EQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 323 D~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) |||+++++|.+.|+.+|++.+++++..+. T Consensus 249 D~A~e~~~l~k~qil~Qaa~amlaQAN~~ 277 (287) T PRK12805 249 DMAAEMSEMTKYKILTQTSISMLSQANQT 277 (287) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 19999999999999999999999998327 No 20 >PRK12808 flagellin; Provisional Probab=100.00 E-value=0 Score=292.91 Aligned_cols=348 Identities=11% Similarity=0.063 Sum_probs=221.7 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) |||-|+...-..+++|.+.+..|.+.++|||||+||++++|||++++++.+||.++..|++..+|..++.+.++++|++| T Consensus 1 m~IntN~~Al~a~~~L~~~~~~l~~s~eRLSSG~RIN~A~DdAAGlaIs~rm~sqi~gl~qa~~Na~dgiS~~qtAEgal 80 (460) T PRK12808 1 MRINTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAM 80 (460) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 96644699999999999999999999998501165266410288999999999999889999998998999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEECCCCCCCCCCCCCCCCCC--CCCC Q ss_conf 889999999999998513788898899999999986567777776520-0243041056654432122333332--2222 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT-DEGQYLFSGINSSEKPLNGYFTKDS--LAKK 160 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~-~~g~~~f~G~~~~~~p~~~~~~~~~--~~~~ 160 (357) +++.++|+|||||+||++||++++.||+++..|+.+++++|.++++.+ |+|.++|.|......+......... .... T Consensus 81 ~ev~~iLqRmReLAVQAANgTns~~DR~aiQ~Ei~qL~~EIdrIa~~T~fNg~~LLdGs~~~~~~~~~~~~~~~~~i~i~ 160 (460) T PRK12808 81 NSVSNILLRMRDLANQSANGTNTDKNQAALQKEFAELQKQIDYIADNTQFNDKNLLDGSNSSIAIQTLDSSDGGKQIGID 160 (460) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCEEEEE T ss_conf 99999999999999986156688788999999999999999999873856887600577875026741267876068641 Q ss_pred CCCCHHHC------CCCCCCCCC-------------------------CCCCCCCCCCCCCCCCCCCCCCCCC------- Q ss_conf 22100010------134543222-------------------------4566532112333221001233444------- Q gi|254780523|r 161 SFDQMLQG------FLEENSKSL-------------------------LAGQHLEVSSMNAQQMTDFIKQLED------- 202 (357) Q Consensus 161 ~~~~~~~~------~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~------- 202 (357) ........ ......... ..................+...... T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (460) T PRK12808 161 LKSASLEALGINNLSIGANGNGLAKATELAGVADDTAANASAAAAKKIDDTTGDTDVKRDAAKVKAYTKQYKALKAALDA 240 (460) T ss_pred CCCCCHHHCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 23232010255530001323333311242020132113331112010133334320023332110000011210000244 Q ss_pred ----------CCCCCCCCCCE-------EECCCCC---------CCEEECC------CCCC---------EEEEEECCCC Q ss_conf ----------44566543200-------1115665---------2000002------5641---------0223203531 Q gi|254780523|r 203 ----------KFSDDEYWANN-------WSNASDH---------NIKYRIK------DTEG---------IDVSANVNMR 241 (357) Q Consensus 203 ----------~~~~~~~~~~~-------~~~~~~~---------~~~~~~~------~~~~---------~~~~~~~~~~ 241 (357) ........... ....... ....... .... .......... T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (460) T PRK12808 241 KDTGLIDDAKKLVDGANTLLNAQAIKKAEETAAKATLTTDITAATLVDKYSDAKSDATTDTRAKAYLDAKAAYDKVKGSM 320 (460) T ss_pred CCCCCCCCCHHCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCC T ss_conf 11111232011013321021022332100000112224444210110022234443445430000000000000235654 Q ss_pred ----------H---------HHHHHHHHHHHCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf ----------0---------112333332100233--4455511356677777899999999999999986689999999 Q gi|254780523|r 242 ----------G---------IRDIMFVAVIGTEFL--SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 (357) Q Consensus 242 ----------~---------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~ 300 (357) . ............... ...............++..||.+++.|...|+++|+.+||||+ T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~t~~~A~~Ai~~ID~AI~~v~~~Ra~lGA~qNRLe~ 400 (460) T PRK12808 321 NSKDVTKLSAAIDRFSKDDASGDAAEVLVAKGDAAKAATTNGTTSTATDSLSAVKAIDEALKTIADNRATLGATLNRLDF 400 (460) T ss_pred CCCCCEEECCHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 43211011010101012455521455566521210012245442115559999999999999999999988189999999 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 999899999999986433327888999999999999999999999997368 Q gi|254780523|r 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 301 ~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) ..+++....++++..+|.|+|+|||+++++|++.|+..||+.+|.++..+. T Consensus 401 ~i~nL~~~~eN~~aa~SrI~DaDmA~E~a~ltk~qILqQAgtamLAQANq~ 451 (460) T PRK12808 401 NVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQT 451 (460) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 999999999999997667660659999999999999999999999996517 No 21 >PRK08412 flgL flagellar hook-associated protein FlgL; Validated Probab=100.00 E-value=0 Score=294.87 Aligned_cols=146 Identities=16% Similarity=0.241 Sum_probs=144.7 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) |||+.++.|++++.++++.+++|.++++|+|||+||+.|+|||++....++||.++..++||.++...+..+++.+|.+| T Consensus 1 Mrvt~~~~~~~~~~~~~~~~~~l~~~~~q~ssg~kI~~~~dd~~~~~~~~~l~~~i~~l~q~~~~~~~a~~~~~~td~aL 80 (777) T PRK08412 1 MRVTFGSKYNQMNNYQNALQNKLNDANTQIASGLKIQYGYQDSDINNQNLKLQYEENTLDQGIDVAQNAYTSTLNTDKAL 80 (777) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 93122133899999887889999999998642672336454746665553156677657899987887999998799999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC Q ss_conf 889999999999998513788898899999999986567777776520024304105665443212 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLN 149 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~~~g~~~f~G~~~~~~p~~ 149 (357) .++.++|+|+|+++|||+|++++..+|.+++.|+++++++++++||++++|+|+|+|.+.+++||. T Consensus 81 ~e~~~~l~~~k~~~vqaand~~~~~sr~aia~el~~lk~~~~~iant~~~g~~lf~G~~~~~kpf~ 146 (777) T PRK08412 81 QEFSKTMEAFKTKLIQAANDVHSETSREAIANDLERLKEHMINIANTSIGGEFLFGGSKVDRPPFD 146 (777) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC T ss_conf 999999999999999860256887789999999999999998642255676798625545668646 No 22 >PRK13588 flagellin B; Provisional Probab=100.00 E-value=0 Score=286.93 Aligned_cols=345 Identities=12% Similarity=0.054 Sum_probs=221.8 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) +||-|+...-..+++|.+.+..|.+..||||||+||++++|||++.+++.+||.++..|++..+|..++.+.++++|++| T Consensus 3 ~~IntNi~Al~a~~~L~~~~~~l~~slerLSSG~RIN~A~DDAAGlaIs~rmrsQi~gl~qA~rNa~dgiSliQTAEGAL 82 (514) T PRK13588 3 FRINTNIAALNAHANGVQNNRDLSSSLEKLSSGLRINKAADDASGMAIADSLRSQAANLGQAIRNANDAIGIVQTADKAM 82 (514) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 47956899999999999999999999997521065356430377899999999999889999986888999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEECCCCCCCCCCCCCCCCCCCC---- Q ss_conf 889999999999998513788898899999999986567777776520-024304105665443212233333222---- Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT-DEGQYLFSGINSSEKPLNGYFTKDSLA---- 158 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~-~~g~~~f~G~~~~~~p~~~~~~~~~~~---- 158 (357) .++.++|+|||||+||++|++++++||.++..|+.+++++|.++++++ |+|.++|-|......+........... T Consensus 83 ~Ev~~iLqRmRELAVQAAN~t~s~~dR~alQ~Ei~qL~~EIdrIa~~T~FNg~~LLdGs~~~~~~qvGa~~~~ti~~~~~ 162 (514) T PRK13588 83 DEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELDNIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIG 162 (514) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEECCEECCCCCCCCCEEEECCCCCCEEEEEEC T ss_conf 99999999999999987037898889999999999999999877652623888503677777128853788854788504 Q ss_pred -------C-CCCC-------------CHHHC------CCCCCCCCC--------C--CCC----------------CCCC Q ss_conf -------2-2221-------------00010------134543222--------4--566----------------5321 Q gi|254780523|r 159 -------K-KSFD-------------QMLQG------FLEENSKSL--------L--AGQ----------------HLEV 185 (357) Q Consensus 159 -------~-~~~~-------------~~~~~------~~~~~~~~~--------~--~~~----------------~~~~ 185 (357) + .... ..... ......... . ... +... T Consensus 163 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 242 (514) T PRK13588 163 ATSSDKIGHVRFETSSFSGEGMLASAAAQNLTEVGLKFKQVDGVNDYKIETVRISTSAGTGIGALAEIINKFSDTLGVRA 242 (514) T ss_pred CCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCEEE T ss_conf 54355434302320243333320000034555410244202454431023457630146406778765304455443047 Q ss_pred -CCC--------CCCCCCCC----------------------CCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEE Q ss_conf -123--------33221001----------------------23344444566543200111566520000025641022 Q gi|254780523|r 186 -SSM--------NAQQMTDF----------------------IKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDV 234 (357) Q Consensus 186 -~~~--------~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (357) ... .......+ +..... .... .. ................++..+.. T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-tg-~~~~~~~~g~~~~~~~~g~~i~~ 319 (514) T PRK13588 243 SYNVMATGGTPIQSGTVRELTINGVEIGTVNDVHKNDADGRLINAINS-VKDR-TG-VEASLDIQGRINLTSRDGRAISV 319 (514) T ss_pred EEEEEECCCCCCCCCCCEEEEECCEEECCCEEEECCCCCCHHHHHHHC-CCCC-CC-EEEEEECCCCEEEEECCCCEEEE T ss_conf 899863145322344301355414010221010024654025554303-2344-44-26896046607887237723898 Q ss_pred E-----------------------------EECCCC-------------HHHHHHH---------------------HHH Q ss_conf 3-----------------------------203531-------------0112333---------------------332 Q gi|254780523|r 235 S-----------------------------ANVNMR-------------GIRDIMF---------------------VAV 251 (357) Q Consensus 235 ~-----------------------------~~~~~~-------------~~~~~~~---------------------~~~ 251 (357) . ....+. ....... ... T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 399 (514) T PRK13588 320 HGASASGQVFGGGNFAGISGTQHAFVGRLTLTRTDARDIIVSGVNFSHVGFHSAQGVAEYTVNLRAVRGIIDANVASAAG 399 (514) T ss_pred ECCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHCCC T ss_conf 40455550003441010245532000211355204420354123333333101345530023201224410242000134 Q ss_pred HHCC------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH Q ss_conf 1002------3344555113566777778999999999999999866899999999998999999999864333278889 Q gi|254780523|r 252 IGTE------FLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 (357) Q Consensus 252 ~~~~------~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~a 325 (357) .... .......+.........+++.||.+++.|...|++||+.|||||+..+.|....++++..+|+|+|+||| T Consensus 400 ~~~~~~~~~~~~~~~~~~v~t~~~A~~ai~~iD~Ai~~Vs~~Ra~LGA~QNRLe~ti~nL~~~~eNl~aA~SrI~DaDmA 479 (514) T PRK13588 400 ANANGAQAETNSQGIGAGVTSLKGAMIVMDMAESARKQLDKIRSDLGSVQNQLVSTINNISVTQVNVKAAESQIRDVDFA 479 (514) T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 20124322121333355653277799999999999999999998772999999999998999999999998889852199 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 99999999999999999999997368 Q gi|254780523|r 326 TAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 326 e~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) +|+++|++.|+..||+.+|.++..++ T Consensus 480 ~Ema~lTk~qIL~QAg~amLAQANq~ 505 (514) T PRK13588 480 EESANFSKYNILAQSGSFAMAQANAV 505 (514) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 99999999999999999999998256 No 23 >PRK12806 flagellin; Provisional Probab=100.00 E-value=0 Score=284.46 Aligned_cols=348 Identities=10% Similarity=0.031 Sum_probs=223.4 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) .+|-|+...-..+++|.+.+..|.+.++|||||+||++++|||++++++.+||.++..+++..+|..++.+.++++|++| T Consensus 3 l~IntN~~Al~a~~~L~~~~~~l~~s~erLSSG~rIN~AaDDaAGlaIs~~m~aqi~gl~qa~~N~~dgiSl~qtAegAL 82 (475) T PRK12806 3 QVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLAQVAEGAM 82 (475) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 18966599999999999999999999997430276256530378999999999999889999998998999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 8899999999999985137888988999999999865677777765-200243041056654432122333332222222 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFAN-MTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF 162 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN-~~~~g~~~f~G~~~~~~p~~~~~~~~~~~~~~~ 162 (357) .++.++|+|||||+||++|+++++.||.++..|+.+++++|.++++ ++|+|+++|.|......+............... T Consensus 83 ~ev~~iLqRmReLAvQAaNgTn~~~DR~aiq~Ei~qL~~eIdrIa~~T~fNg~~LLdGs~~~~~~qvG~~~~~~i~~~~~ 162 (475) T PRK12806 83 QETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSELERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIG 162 (475) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEECCEEEECCCCCCCEEEECCCCCCEEEEEEC T ss_conf 99999999999999986168887788999999999999999878652626888741367777216753788856899614 Q ss_pred C--------------CHHHCCCCCCCC--------CCCCCCCC-----------------------------CCCCCCCC Q ss_conf 1--------------000101345432--------22456653-----------------------------21123332 Q gi|254780523|r 163 D--------------QMLQGFLEENSK--------SLLAGQHL-----------------------------EVSSMNAQ 191 (357) Q Consensus 163 ~--------------~~~~~~~~~~~~--------~~~~~~~~-----------------------------~~~~~~~~ 191 (357) . ............ ........ ......+. T Consensus 163 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (475) T PRK12806 163 SIKASSIGGIATATGTEVAGAAATDITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTSGT 242 (475) T ss_pred CCCCCCCCCEEEECCCEECCCCCCEEEEEECCCCCEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCC T ss_conf 43112225501102311024432014675046531110233302310245430134433211023454533565303442 Q ss_pred CCCCCCCC----CCCCCCCC------------------------CCCC-CEEECCCCCCCEEECCCCCCEEEEEECC--- Q ss_conf 21001233----44444566------------------------5432-0011156652000002564102232035--- Q gi|254780523|r 192 QMTDFIKQ----LEDKFSDD------------------------EYWA-NNWSNASDHNIKYRIKDTEGIDVSANVN--- 239 (357) Q Consensus 192 ~~~~~~~~----~~~~~~~~------------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 239 (357) ........ .+...... .... .......+.........+..+....... T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~i~~~~~~t~~~ 322 (475) T PRK12806 243 QAVGAIGGTAGDTYNLTINGVAIYTNLNVATALTNSDLRDAINGVSNQTGVVASLNGGNMTLTAADGRNITVTESGTGFT 322 (475) T ss_pred EEEEECCCCCCCCEEEEECCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCEEEEECCCCCC T ss_conf 13210234556521333124024411320002342268887521233341488713660689840564158850354200 Q ss_pred ---------CCHH-------------HHHHHHHH---------HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf ---------3101-------------12333332---------1002334455511356677777899999999999999 Q gi|254780523|r 240 ---------MRGI-------------RDIMFVAV---------IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQR 288 (357) Q Consensus 240 ---------~~~~-------------~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~ 288 (357) ...+ .....+.. ...........+.........++..||.+++.|...| T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~g~~~idv~t~~~A~~Ai~~ID~AI~~V~~~R 402 (475) T PRK12806 323 AGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANIGLSANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNSNR 402 (475) T ss_pred CCCCCEEECCCCCCCCCCCEEEECCCCCEECCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 24543132045434411330111122101015401001222334444445333445437779999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 986689999999999899999999986433327888999999999999999999999997368 Q gi|254780523|r 289 AVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 289 a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) +++|+.|||||+..++++...++++..+|.|+|+|||+|+++|++.|+..||+.+|.++..+. T Consensus 403 a~lGA~qNRLe~~i~nL~~~~eN~~aA~SrI~DaDmA~E~s~ltk~qILqQA~~amLAQANq~ 465 (475) T PRK12806 403 ANMGALQNRFESTIANLQNVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSL 465 (475) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 987089999999999999999999997546450229999999999999999999999996507 No 24 >PRK08026 flagellin; Validated Probab=100.00 E-value=0 Score=282.62 Aligned_cols=138 Identities=10% Similarity=0.037 Sum_probs=132.2 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) .+|-|+...-..+++|.+.+..|.+..||||||+||++++|||++.+++.+||.++..|++..+|..++.+.++++|++| T Consensus 3 ~~INtNi~Al~a~~~L~~~~~~l~~sleRLSSGlRIN~A~DDAAGlaIs~rm~sQi~GL~qA~rNa~DgiSliQTAEGAL 82 (566) T PRK08026 3 QVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGAL 82 (566) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 37966799999999999999999999997510166466321467899999999999889999986988999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEECCC Q ss_conf 889999999999998513788898899999999986567777776520-0243041056 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT-DEGQYLFSGI 141 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~-~~g~~~f~G~ 141 (357) +++.++|+|||||+||++|+++++.||.++..|+.+++++|.++++++ |+|+++|.|. T Consensus 83 ~ev~~iLqRmRELAVQAANgTns~~dR~aiQ~Ei~qL~~EIdRIa~~T~FNg~~LL~g~ 141 (566) T PRK08026 83 SEINNNLQRIRELTVQAATGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKD 141 (566) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC T ss_conf 99999999999999986047899999999999999999999988874738989602788 No 25 >PRK12584 flagellin A; Reviewed Probab=100.00 E-value=0 Score=282.61 Aligned_cols=347 Identities=8% Similarity=-0.001 Sum_probs=221.1 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) .||-|+...-...++|.+.+..|.+..||||||+||++++|||++.+++.+||.++..|+|..+|..++.+.++++|++| T Consensus 3 ~~INtNi~Alna~~~L~~~~~~ls~sleRLSSGlRIN~AaDDAAGlaIserm~sQI~gL~qA~rNa~DgiSliQTAEGAL 82 (510) T PRK12584 3 FQVNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQAIANTNDGMGIIQVADKAM 82 (510) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 37965599999999999989999999987533266466430666889999999999889999884887999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEECCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 889999999999998513788898899999999986567777776520-0243041056654432122333332222222 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT-DEGQYLFSGINSSEKPLNGYFTKDSLAKKSF 162 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~-~~g~~~f~G~~~~~~p~~~~~~~~~~~~~~~ 162 (357) .++.++|+|||||+||++|++++++||.++..|+.+++++|.++++.+ |+|.++|.|......... ............ T Consensus 83 ~ev~~iLqRmRELAVQAAN~tns~~dR~aiQ~Ei~qL~~EIdRIa~~T~FNg~~LLdGs~~~~~~qv-Ga~~~~~i~~~i 161 (510) T PRK12584 83 DEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKEFQV-GAYSNQSIKASI 161 (510) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCEECCCCCCCCCEEEE-CCCCCCEEEEEC T ss_conf 9999999999999998603889888999999999999999856623165788862267778730775-578885588743 Q ss_pred CC-------------------------HHHCCCCCCCCC-------C----------------CCCCCCCC--CC----- Q ss_conf 10-------------------------001013454322-------2----------------45665321--12----- Q gi|254780523|r 163 DQ-------------------------MLQGFLEENSKS-------L----------------LAGQHLEV--SS----- 187 (357) Q Consensus 163 ~~-------------------------~~~~~~~~~~~~-------~----------------~~~~~~~~--~~----- 187 (357) .. ............ . ....+... .. T Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~dg~~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 241 (510) T PRK12584 162 GSTTSDKIGQVRIATGALITASGDISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSD 241 (510) T ss_pred CCCCCCCCCCEEEECCCEEECCCCEEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECC T ss_conf 54545444423430253121144035554213564420120046640467513678876513454433045677774022 Q ss_pred ---CC---------CCCCCCC---CCC-C-------CCCCCCCCCCC--------CEEECCCCCCCEEEC---------- Q ss_conf ---33---------3221001---233-4-------44445665432--------001115665200000---------- Q gi|254780523|r 188 ---MN---------AQQMTDF---IKQ-L-------EDKFSDDEYWA--------NNWSNASDHNIKYRI---------- 226 (357) Q Consensus 188 ---~~---------~~~~~~~---~~~-~-------~~~~~~~~~~~--------~~~~~~~~~~~~~~~---------- 226 (357) .. +...... ... . ........+.. .......+..+.... T Consensus 242 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~tg~~a~~~~~g~~~~~~~~g~~i~~~~~~~~~~~~~~ 321 (510) T PRK12584 242 VAVQSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSTDGRGIEIKTDSVSNGPSAL 321 (510) T ss_pred CEECCCCCEEEEECCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCEE T ss_conf 10013531023203413310111013565146776531223454316885156716776315752487512444564215 Q ss_pred ---CCCCCEE-------------------EEEECCCCH--------H--HHHHHHH----------------HHHC---- Q ss_conf ---2564102-------------------232035310--------1--1233333----------------2100---- Q gi|254780523|r 227 ---KDTEGID-------------------VSANVNMRG--------I--RDIMFVA----------------VIGT---- 254 (357) Q Consensus 227 ---~~~~~~~-------------------~~~~~~~~~--------~--~~~~~~~----------------~~~~---- 254 (357) ..+.... ..+...... + ....... .... T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (510) T PRK12584 322 TMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFTAIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNA 401 (510) T ss_pred EEECCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHCCCCCCC T ss_conf 77415410023433323036653145321344214444332032025654202344311223554343201102555321 Q ss_pred ---CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH Q ss_conf ---23344555113566777778999999999999999866899999999998999999999864333278889999999 Q gi|254780523|r 255 ---EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQL 331 (357) Q Consensus 255 ---~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l 331 (357) ..................+++.||.+++.|...|++||+.|||||+..+.|....+++...+|+|+|+|||+|+++| T Consensus 402 ~~~~~~~~~~~~v~t~~~A~~ai~~iD~AI~~V~~~Ra~LGA~QNRLe~ti~NL~~~~eNltaA~SrI~DaD~A~Ema~~ 481 (510) T PRK12584 402 VIASGNQSLGSGVTTLRGAMVVIDIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANF 481 (510) T ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 00135542355543377799999999999999999997664899989999988999999999998889853089999999 Q ss_pred HHHHHHHHHHHHHHHHHHCC Q ss_conf 99999999999999997368 Q gi|254780523|r 332 STLINKIEMSYMITTKLQKL 351 (357) Q Consensus 332 ~~~q~~~qas~~~~a~i~~~ 351 (357) ++.|+..||+.+|.+|..++ T Consensus 482 tk~qIL~QAgtamLAQANq~ 501 (510) T PRK12584 482 NKNNILAQSGSYAMSQANTV 501 (510) T ss_pred HHHHHHHHHHHHHHHHHHCC T ss_conf 99999999999999986176 No 26 >PRK08411 flagellin; Reviewed Probab=100.00 E-value=0 Score=277.90 Aligned_cols=141 Identities=12% Similarity=0.047 Sum_probs=135.5 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) +||-|+...-..+++|.+.+..|.+..+|||||+||++++|||++.+++.+|+.++..|++..+|..++.+.++++|++| T Consensus 3 l~INtNi~alna~r~L~~s~~~l~~sleRLSSGlRINsA~DDAAGLaISerm~sQI~GL~qA~rNanDgISl~QTAEGAL 82 (573) T PRK08411 3 FRINTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGNDALGILQTADKAM 82 (573) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 27956799999999999999999999987500065566330477899999999998889999986988999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEECCCCCC Q ss_conf 889999999999998513788898899999999986567777776520-0243041056654 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT-DEGQYLFSGINSS 144 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~-~~g~~~f~G~~~~ 144 (357) .+++++|+|||||+||++|++++++||+++..|+.+++++|.++++++ |+|++||-|.... T Consensus 83 ~Ev~~iLqRmRELAVQAAN~tns~~DR~alQ~Ei~qL~~EIdRIa~tT~FNg~kLLdGs~~~ 144 (573) T PRK08411 83 DEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFIN 144 (573) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCEEECCCCCCC T ss_conf 99999999999999996146899899999999999999999766110438988702688776 No 27 >PRK13589 flagellin; Provisional Probab=100.00 E-value=0 Score=275.78 Aligned_cols=141 Identities=11% Similarity=0.041 Sum_probs=135.3 Q ss_pred CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 13218999999999999999999999999720220464212899999999999999999999999999999999999988 Q gi|254780523|r 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 (357) Q Consensus 4 ~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L 83 (357) +||-|+...-..+++|.+.+..|.+..+|||||+||++++|||++.+++.+||.++..|+|..+|..++.+.++++|++| T Consensus 3 l~INtNi~alna~rnL~~~~~~l~~sleRLSSGlRINsA~DDAAGLaISermrsQI~GL~qA~rNAnDgISliQTAEGAL 82 (573) T PRK13589 3 FRINTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQAINNGNDAIGILQTADKAM 82 (573) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 37956899999999999999999999987510065456330467889999999998889999984998999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEECCCCCC Q ss_conf 889999999999998513788898899999999986567777776520-0243041056654 Q gi|254780523|r 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT-DEGQYLFSGINSS 144 (357) Q Consensus 84 ~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~-~~g~~~f~G~~~~ 144 (357) .+++++|+|||||+||++|++++++||.++..|+.+++++|.++++++ |+|++||-|.... T Consensus 83 ~Ev~~iLqRmRELAVQAAN~tns~~DR~alQ~Ei~qL~~EIdRIa~tT~FNg~kLLdGs~~~ 144 (573) T PRK13589 83 DEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFIN 144 (573) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCEEEECCCCCC T ss_conf 99999999999999997046899899999999999999999666121648999810688777 No 28 >TIGR02550 flagell_flgL flagellar hook-associated protein 3; InterPro: IPR013384 FlgL (or HAP3) proteins are flagellar hook-associated proteins encoded in bacterial flagellar operons. An N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved in this family, though members show considerable length heterogeneity between these two well-conserved terminal regions - proteins in this family range from 287 to more than 500 residues in length. ; GO: 0001539 ciliary or flagellar motility, 0009424 flagellin-based flagellum hook. Probab=100.00 E-value=4e-43 Score=257.23 Aligned_cols=349 Identities=14% Similarity=0.121 Sum_probs=249.0 Q ss_pred EECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 32189999999999999999999999997202204642128999999999999999999999999999999999999888 Q gi|254780523|r 5 GISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLS 84 (357) Q Consensus 5 ~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L~ 84 (357) ||++.++|++....+...+.++.+.+.|++||||+..|+|||.++.+++.++...+.+++|.+|+..+.+||...|+.|. T Consensus 1 r~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~g~~~~~~sddp~~~~~~~~~~~~~~~~~q~~~n~~~~~~~l~~~~~~l~ 80 (393) T TIGR02550 1 RVSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALS 80 (393) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 96513567777777777777888877776420110244222578888887777777766666667777766665544444 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEECCCCCCCCCCCCCCCCCC-CCCCCC Q ss_conf 89999999999998513788898899999999986567777776520-0243041056654432122333332-222222 Q gi|254780523|r 85 SMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT-DEGQYLFSGINSSEKPLNGYFTKDS-LAKKSF 162 (357) Q Consensus 85 ~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~-~~g~~~f~G~~~~~~p~~~~~~~~~-~~~~~~ 162 (357) ++.+.+++++++++++.|+++++.+|..++.|+.+++++++.++|++ ..|+|+|+|.+.+++||........ .+.... T Consensus 81 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~~~~~~~l~~~an~~d~~g~y~f~g~~~~~~pf~~~~~~~~~~~~g~~ 160 (393) T TIGR02550 81 SVGDLLQRARELAVQAANGTLSDDDRKAIAKEIKQLLDQLLSLANTKDGNGRYIFSGTKTDTPPFSEDGGGSGVTYAGDG 160 (393) T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 45677888888887642255787789999999999998777641011357632204655565553214665431003653 Q ss_pred CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------C-------------------CCCCCCC----C Q ss_conf 1000101345432224566532112333221001233444--------4-------------------4566543----2 Q gi|254780523|r 163 DQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLED--------K-------------------FSDDEYW----A 211 (357) Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-------------------~~~~~~~----~ 211 (357) ........................... .. ........ . ....... . T Consensus 161 -~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (393) T TIGR02550 161 -QRIVQVASSRSMPIGLPGDKVFMSIPN-DG-YVVNAAASQTDLLAAILVDTIGRYTFVDPLEAGLELLGVLANDAVSAT 237 (393) T ss_pred -CCCEEEECCCCCCCCCCCCHHCCCCCC-CC-CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC T ss_conf -000123023410134442001012443-32-211000112110000001101121111122220011000010100000 Q ss_pred CEEECCCCCCCEEECCCCCCEEE---------EEECCCCHHHHHHHHHHHHCCCCCCC-CCC-HHHHHHHHHHHHHHHHH Q ss_conf 00111566520000025641022---------32035310112333332100233445-551-13566777778999999 Q gi|254780523|r 212 NNWSNASDHNIKYRIKDTEGIDV---------SANVNMRGIRDIMFVAVIGTEFLSKN-LTD-GARNVLTKKMLSTVQQG 280 (357) Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~l~~a 280 (357) ............. ......... ........+................. ... ......+...+..++.+ T Consensus 238 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393) T TIGR02550 238 DIITESLEIGTTG-IKIKLNDELSSVLTGLAPPGNLEKSVFSTGDDLFAALKSLEDALSSGDQAAILAALSASLNELDKA 316 (393) T ss_pred CCHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 0000000002121-123332100010001221001101210025789999887654202320356677777887667767 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC Q ss_conf 99999999986689999999999899999999986433327888999999999999999999999997368505209 Q gi|254780523|r 281 LSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 (357) Q Consensus 281 ~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~SL~dyL 357 (357) .+.+...|+++|+++++++.....+......++..+++++|+|++++++++...+..++|++.+++++.++|||||| T Consensus 317 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~d~~~~i~~~~~~~~~~~a~~~~~~~~~~~sl~~~~ 393 (393) T TIGR02550 317 LDNVLSARAEVGARLNRLELLESRLSEQKLVLTEVLSDLEDVDLAEAISDLTMQQSALQAALKAFAKIQQLSLFDYL 393 (393) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 76666655554335666666665434445566666555441026788888888899999999876665200222039 No 29 >PRK12687 flagellin; Reviewed Probab=100.00 E-value=3.4e-39 Score=235.38 Aligned_cols=297 Identities=10% Similarity=0.056 Sum_probs=208.1 Q ss_pred CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 61321899999999999999999999999972022046421289999999999999999999999999999999999998 Q gi|254780523|r 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAH 82 (357) Q Consensus 3 ~~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~ 82 (357) +++|.|+.-....+.+|...+..|.+.++|||||+||++|+|||++++++.+||.++..+++..+|++.+.+.+++++.+ T Consensus 1 M~sI~TN~~A~~A~~~L~~~~~~l~~s~~RLSTG~RInsA~DDAAglaIa~~mrs~~~gl~~a~~n~~~g~s~v~ta~~a 80 (311) T PRK12687 1 MSSLLTNTSAMTALQTLRNVSSSLATTQNRISTGYRVATASDNSAYWSIATTMRSDNEALSAVSDALGLGAATVDTMYTA 80 (311) T ss_pred CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 97320339999999999998999999999853236335531218899999999988988999998887478999999999 Q ss_pred HHHH----HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEECCCCCCCCCCCCCCCCCCC Q ss_conf 8889----999999999998513788898899999999986567777776520-02430410566544321223333322 Q gi|254780523|r 83 LSSM----QKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT-DEGQYLFSGINSSEKPLNGYFTKDSL 157 (357) Q Consensus 83 L~~i----~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~-~~g~~~f~G~~~~~~p~~~~~~~~~~ 157 (357) |.++ .++|.+++++++++.++ ..||..+..|+.++.+++.++++.. |+|..+|.+........ ........ T Consensus 81 l~~v~~~~~~~l~~l~~~~~~a~~~---~~Dr~~iq~E~~~L~~ei~~ia~~t~fNG~nlL~~~~~~~~~~-~~~~~~~~ 156 (311) T PRK12687 81 LTSVVGDSKSGLTALKAKLVAAREP---GIDRTKIQSEITAIQNDLKNTAGLAVFNGENWLSVDSSPSSYN-ATKSVVSS 156 (311) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCC-CCCCCCCC T ss_conf 9988988999999999999854567---4138999999999999999999756534424304676444454-42100000 Q ss_pred CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEE Q ss_conf 22222100010134543222456653211233322100123344444566543200111566520000025641022320 Q gi|254780523|r 158 AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSAN 237 (357) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (357) ..... ............... ...+.... ..... ...... ..... T Consensus 157 ~~~~~------------------g~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~-~~~~~~-----~~~~~---- 200 (311) T PRK12687 157 FTRVG------------------GTVAIKTIDVNIAKL-------ALYDTNGS-STTGI-LDKTVT-----VGTAT---- 200 (311) T ss_pred EECCC------------------CCCEEEEEEEECHHH-------HHCCCCCC-CCCCC-HHHHHC-----CCCCC---- T ss_conf 00247------------------731000145311012-------10035664-31110-000000-----34332---- Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 35310112333332100233445551135667777789999999999999998668999999999989999999998643 Q gi|254780523|r 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 (357) Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s 317 (357) . ...................+...+..||.+++.|...|+.+|+.++||++..+++.+..++++..++ T Consensus 201 ~------------~~~~~~~~~~~~~~~~~~~~~~~i~~id~Ai~~v~~~ra~lGA~~nRLe~~~~nl~~~~~nl~aa~g 268 (311) T PRK12687 201 A------------SVSSIDIHLLTDSATDLTKLDGYIGIVDQALGSVTQASADLGATKTRIDSNSNFVKSLRDAIDRGVG 268 (311) T ss_pred C------------CCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 2------------1001210110111445788987999999999999999998707899999999899999999998676 Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 3327888999999999999999999999997368 Q gi|254780523|r 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 318 ~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) +|+|+||++|.++|+++|+..|++.++.++..+. T Consensus 269 rI~DADmA~Esa~l~k~QilqQag~amLaqANq~ 302 (311) T PRK12687 269 QLVDADMNAESTRLQALQTQQQLGIQALSIANQG 302 (311) T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 8756659999999999999999999999998457 No 30 >pfam00669 Flagellin_N Bacterial flagellin N-terminal helical region. Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700. Probab=100.00 E-value=2.1e-33 Score=203.12 Aligned_cols=138 Identities=25% Similarity=0.299 Sum_probs=134.8 Q ss_pred ECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 21899999999999999999999999972022046421289999999999999999999999999999999999998888 Q gi|254780523|r 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 (357) Q Consensus 6 Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L~~ 85 (357) |+|++.+...+++|++.+.+|.++++||||||||++|+|||+++.++++|+.++..+++|.+|+..+.+||+.+|++|.+ T Consensus 1 I~tN~~a~~al~~l~~~~~~l~~~~~qlSTGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~N~~~a~~~l~~~e~al~~ 80 (139) T pfam00669 1 ISTNALALAARRTLNRNQAELQKAQEELSTGLRIDSALDLGAGTAISVSLRSQIRGLSQAVRNNNLGISRLQTAQGALSE 80 (139) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 96519999999999999999999999987268457844269999999999999999999999899999999978899999 Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCEEECCCCC Q ss_conf 999999999999851378889889999999998656777777652-0024304105665 Q gi|254780523|r 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANM-TDEGQYLFSGINS 143 (357) Q Consensus 86 i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~-~~~g~~~f~G~~~ 143 (357) |.+++.|+||+++++.|+++++++|.+++.|+.++++++..++|. .+.|.|+|+|+++ T Consensus 81 i~~~l~r~kel~v~a~n~~~~~~dr~ai~~Ei~~l~~~i~~~an~t~~nG~~lFsGt~T 139 (139) T pfam00669 81 VTDILQRLRELAVQAANGGNSDIDRASAQAEIQQLTSELNNIANTTSFNGEYLFSGTNT 139 (139) T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC T ss_conf 99999999999998846899999999999999999999999998577187301289696 No 31 >pfam00700 Flagellin_C Bacterial flagellin C-terminal helical region. Flagellins polymerize to form bacterial flagella. There is some similarity between this family and pfam00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate and this is shown to be correct as structurally this family forms an extended helix that interacts with pfam00700. Probab=99.81 E-value=2.1e-19 Score=125.24 Aligned_cols=84 Identities=23% Similarity=0.402 Sum_probs=82.1 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH Q ss_conf 89999999999999998668999999999989999999998643332788899999999999999999999999736850 Q gi|254780523|r 274 LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 (357) Q Consensus 274 ~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~SL 353 (357) ++.||.++++|...|+++|+.++|++...++++....+++..+++++|+|++|++++|.+.|+.+||++++++|+.++|| T Consensus 1 i~~id~Ai~~v~~~ra~lGa~qnRl~~~~~~l~~~~~n~~~a~s~i~D~D~Aee~t~l~~~qil~qas~a~~aqanqlsl 80 (84) T pfam00700 1 IDILDEAITQLTSQRSDLGAVQNRLESANTNLKNQSDNLKAAISRIEDVDPAEASTRVTKLQILLQASYALTAQANQLSL 80 (84) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 91889999999999998859999999999889999999999998866650999999999999999999999999867888 Q ss_pred HHCC Q ss_conf 5209 Q gi|254780523|r 354 LNYL 357 (357) Q Consensus 354 ~dyL 357 (357) +||| T Consensus 81 ln~L 84 (84) T pfam00700 81 LNLL 84 (84) T ss_pred HHHC T ss_conf 8649 No 32 >PRK12688 flagellin; Reviewed Probab=98.45 E-value=1.9e-07 Score=58.72 Aligned_cols=102 Identities=11% Similarity=0.095 Sum_probs=87.6 Q ss_pred EECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 32189999999999999999999999997202204642128999999999999999999999999999999999999888 Q gi|254780523|r 5 GISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLS 84 (357) Q Consensus 5 ~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L~ 84 (357) .|-=+.--+|.+..|+.--.=|...|.||+||||++.+-|+|.-+..+..|..+.+.+....+-+..+...|+.+.+.+. T Consensus 3 ~IvLS~avRQNLlSLQsTAdLLATTQsRLssGKKVNtALDNPTNFFTAagLdsRaSdInnLLDGI~NGVQilQAANTGIT 82 (888) T PRK12688 3 GVVLSNAVRQNLSSLQATADLLATTQSRLSSGKKVNTALDNPTNFFTAASLDSRASDINNLLDGIGNGVQILQAANTGIT 82 (888) T ss_pred CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCH T ss_conf 34417888767777777899998877765236612212368753110012341045677777521225553345403606 Q ss_pred HHHHHHHHHHHHHHHHCCCCCC Q ss_conf 8999999999999851378889 Q gi|254780523|r 85 SMQKIVQDMVGPLVILLEGKTD 106 (357) Q Consensus 85 ~i~~~l~~~~~~~v~a~n~t~~ 106 (357) +.+++...+|..+.|+...... T Consensus 83 sL~kLvDsaKSIAnQALqt~~g 104 (888) T PRK12688 83 SLNKLVDSAKSIANQALQTNVG 104 (888) T ss_pred HHHHHHHHHHHHHHHHHHHHCC T ss_conf 6899999899999987652036 No 33 >PRK07191 flgK flagellar hook-associated protein FlgK; Validated Probab=97.39 E-value=0.0064 Score=33.61 Aligned_cols=70 Identities=14% Similarity=0.128 Sum_probs=60.8 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 9999999986689999999999899999999986433327888999999999999999999999997368 Q gi|254780523|r 282 SGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 282 ~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) +......+.+|...+..+...+..+.....++..+..+.++++-|+.++|-++|-.|||+-++.+-+.+| T Consensus 379 ~~~~~lvs~ig~~~~~a~~~~~~~~~~~~~~~~~r~svsGVnlDEE~~nLi~~Q~aY~AsArvitt~dem 448 (456) T PRK07191 379 DAATALVGYIAITSNQNHSELENAENVRNQAERYWESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKL 448 (456) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999999999999999999999984658178999999999999999999999999999 No 34 >PRK07521 flgK flagellar hook-associated protein FlgK; Validated Probab=97.23 E-value=0.01 Score=32.52 Aligned_cols=70 Identities=13% Similarity=0.106 Sum_probs=61.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 9999999986689999999999899999999986433327888999999999999999999999997368 Q gi|254780523|r 282 SGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 282 ~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) +......+.+|...+......+..+.....++..+..+.+|++-|+.++|-++|.+|||+-++..-+.+| T Consensus 404 ~~~~~~v~~ig~~~~~a~~~~~~~~~~~~~l~~~r~svSGVnlDEE~~nLi~~Q~aY~AsArvitt~dem 473 (482) T PRK07521 404 DLAASSLSWLEQQRSSASSEASYQSALLSRAQEALSNATGVDTDDEMALLLDLEQSYAASAKVISTVDEM 473 (482) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999999999999999999999984138059999999999999999999999999999 No 35 >PRK06799 flgK flagellar hook-associated protein FlgK; Validated Probab=96.97 E-value=0.018 Score=31.11 Aligned_cols=66 Identities=9% Similarity=0.010 Sum_probs=53.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 999986689999999999899999999986433327888999999999999999999999997368 Q gi|254780523|r 286 EQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 286 ~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) ...+.+|..........+........++..+..+.++++-|+.++|-++|-.|||+-++.+-+.+| T Consensus 358 ~~v~~~~~~~~~a~~~~~~~~~~~~~~~~~r~svsGVnlDEE~~nLl~~QqaY~A~AkvIst~dem 423 (431) T PRK06799 358 QFIVGVASDKSAVNAYQKIHTDLLEGIQQEKMSLEGVNMEEEMVNLMAFQKYFVANSKAITTMNEV 423 (431) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 999999999999999999999999999999982538388899999999999999999999999999 No 36 >PRK06665 flgK flagellar hook-associated protein FlgK; Validated Probab=96.63 E-value=0.03 Score=29.86 Aligned_cols=71 Identities=10% Similarity=0.023 Sum_probs=63.7 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 99999999986689999999999899999999986433327888999999999999999999999997368 Q gi|254780523|r 281 LSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 281 ~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) .+......+++|...+..+...+..+.....++..+..+.+|++-||.++|-++|-+|||+-++.+-+.+| T Consensus 548 ~d~y~~lv~~vG~~~~~a~~~~~~~~~l~~~~~~~r~svSGVnlDEE~anLikfQqaY~AsArvIst~dem 618 (628) T PRK06665 548 DDFFANTASNIGIKGQIAEITKNSQNQILKELTDMRQSVSGVNKDEELANMIEFQQSYNASAKFINVSNEL 618 (628) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999999999999999999987636029999999999999999999999999999 No 37 >PRK12714 flgK flagellar hook-associated protein FlgK; Provisional Probab=96.56 E-value=0.035 Score=29.47 Aligned_cols=70 Identities=10% Similarity=0.080 Sum_probs=62.4 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 9999999986689999999999899999999986433327888999999999999999999999997368 Q gi|254780523|r 282 SGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 282 ~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) +......+++|......+...+..+.....++..+..+.+|.+-||.++|-++|-.|+|+-++..-+.+| T Consensus 546 ~~y~~lvs~vG~~a~~a~~~~~~~~~l~~~~~~~r~SvSGVnlDEE~anLikfQqaY~AaArvIttadem 615 (624) T PRK12714 546 GALSGLTTSVGSAARAANYSADAQKVINDQAQASRDSISGVNLDEEAADMLKLQQAYQAAAQMISTADTM 615 (624) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999999999999999999999870306168999999999999999999999999999 No 38 >PRK06945 flgK flagellar hook-associated protein FlgK; Validated Probab=96.48 E-value=0.043 Score=29.02 Aligned_cols=71 Identities=11% Similarity=0.027 Sum_probs=64.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 99999999986689999999999899999999986433327888999999999999999999999997368 Q gi|254780523|r 281 LSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 281 ~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) .+......+++|......+...+..+.....++..+..+.+|.+-||.++|-++|-+|+|+-++.+-+.+| T Consensus 571 ~~~y~~~vs~iG~~a~~a~~~~~~q~~l~~~~~~~r~SvSGVnlDEEl~nLikyQqaY~AaArvItt~deM 641 (649) T PRK06945 571 TGAYAQLVNDIGNKASQLKVSSAAQTALLTQITTAQQSVSGVNLDEEAANLLQYQQLYQANAKVIQTASTL 641 (649) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999999999999999999974406139999999999999999999999999999 No 39 >PRK05683 flgK flagellar hook-associated protein FlgK; Validated Probab=96.39 E-value=0.048 Score=28.72 Aligned_cols=71 Identities=11% Similarity=-0.033 Sum_probs=63.3 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 99999999986689999999999899999999986433327888999999999999999999999997368 Q gi|254780523|r 281 LSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 281 ~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) .+......+++|..-+..+...+..+.....++..+..+.+|++-||.++|-++|-+|+|+-++..-+.+| T Consensus 598 ~d~y~~lvs~vG~~a~~A~~~~~~q~~l~~~~~~~r~SvSGVnlDEE~anLikfQqaY~AaArvItt~deM 668 (676) T PRK05683 598 TDAYGKLVERVGTLASQARADADATAAVLKQAQDSRDSLSGVSLDEEAANLIKFQQYYTASSQIIKAAQET 668 (676) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999999999999999999985625039999999999999999999999999999 No 40 >PRK12715 flgK flagellar hook-associated protein FlgK; Provisional Probab=96.21 E-value=0.061 Score=28.15 Aligned_cols=70 Identities=9% Similarity=-0.030 Sum_probs=61.3 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 9999999986689999999999899999999986433327888999999999999999999999997368 Q gi|254780523|r 282 SGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 282 ~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) +.-....+++|...+..+...+..+.....++..+..+.++.+-||.++|-++|-+|||+-++.+-+.+| T Consensus 571 d~Y~~lvs~vG~~t~~A~~~~~~~~~l~~q~~~~r~SvSGVNLDEE~aNLi~fQqaY~AsArvIsta~em 640 (649) T PRK12715 571 DRYGSLLAEVGGRTNQAKTSFESADILHKQALDFQDSKSGVNLDEEGANLLVFQQAYQAAGKLMEISNQI 640 (649) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999999899999999999999860315168899999999999999999999999999 No 41 >PRK07739 flgK flagellar hook-associated protein FlgK; Validated Probab=96.10 E-value=0.07 Score=27.83 Aligned_cols=70 Identities=9% Similarity=0.041 Sum_probs=60.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 9999999986689999999999899999999986433327888999999999999999999999997368 Q gi|254780523|r 282 SGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 282 ~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) +......+.+|......+...+..+.....++..+..+.+||+.|+.++|-++|-.|||+-++.+-+.+| T Consensus 418 ~~~~~~v~~vg~~~~~a~~~~~~~~~~~~~~~~~~~s~SGVnlDEE~~nLi~~Q~aYqAnAkvItt~dem 487 (500) T PRK07739 418 DFYQSLIGKLGVDAQEANRMAENSEVLVDQVDNRRQSVSAVSLDEEMTNMIQFQHAYNAAARMITAIDEM 487 (500) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999999999999999999999987129669999999999999999999999999999 No 42 >PRK08871 flgK flagellar hook-associated protein FlgK; Validated Probab=95.99 E-value=0.079 Score=27.53 Aligned_cols=71 Identities=8% Similarity=0.061 Sum_probs=59.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 99999999986689999999999899999999986433327888999999999999999999999997368 Q gi|254780523|r 281 LSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 281 ~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) .+-.....+++|......+...+.-+.....++..+..+.+|++-|+.++|-++|-+|+|+-++..-+.+| T Consensus 548 ~d~y~~lvs~iG~~~~~a~~~~~~~~~~~~~~~~~~~svSGVnlDEEl~nLikyQqaY~AaArvItt~dem 618 (626) T PRK08871 548 IDLYHNLNTEVGLKKATATRLAEVARLEKEAAQSRVASISGVNLDEEAANMMKFQQAYMASSRIMQAANDT 618 (626) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999999999999999999860115039999999999999999999999999999 No 43 >TIGR02492 flgK_ends flagellar hook-associated protein FlgK; InterPro: IPR002371 Within the bacterial flagellum, the basal-body rod, the hook, the hook- associated proteins (HAPs), and the helical filament together constitute an axial substructure whose elements share structural features and a common export pathway . The amino acid sequences of the hook protein and of the three hook-associated proteins of Salmonella typhimurium have been deduced from the DNA sequences of their structural genes (flgE, flgK, flgL and fliD respectively). These sequences have been compared with each other and with those for the filament protein (flagellin) and four rod proteins. The hook protein was found to be most similar to the distal rod protein (FlgG) and the proximal hook-associated protein (HAP1), which are thought to be attached to the proximal and distal ends of the hook, the similarities being most pronounced near the N- and C-termini. It is thought that the axial proteins may adopt amphipathic alpha-helical conformations at their N- and C-termini. These regions of the filament and hook are believed to be responsible for quaternary interactions between subunits. Interaction between N- and C-terminal alpha-helices may be important in the formation of the axial structures of the flagellum. Although consensus sequences have been noted, no consensus extends to the entire set of axial proteins. Thus the basis for recognition of a protein for export by the flagellum-specific pathway remains to be identified.; GO: 0005198 structural molecule activity, 0009296 flagellum biogenesis, 0009424 flagellin-based flagellum hook. Probab=95.94 E-value=0.083 Score=27.42 Aligned_cols=74 Identities=11% Similarity=0.010 Sum_probs=67.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 99999999999986689999999999899999999986433327888999999999999999999999997368 Q gi|254780523|r 278 QQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 278 ~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) ....+......+.+|...++.+...+..+.....++..+..+.+|-+-||+++|-++|-.|+|+-++.+-+-+| T Consensus 415 ~~~~~~y~~~~s~~g~~~~~a~~~~~~~~~~l~~~~~~~~s~sGVs~DEE~~~l~~~Q~~Y~A~ak~i~t~d~m 488 (495) T TIGR02492 415 ESLDDFYASLVSQIGSDASQAESALEAQEALLNQLQEARSSISGVSLDEEMANLIQYQKAYQASAKVISTVDEM 488 (495) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 43899998877899999999888888899999999998876416679999999999998899999999999999 No 44 >PRK12688 flagellin; Reviewed Probab=95.83 E-value=0.093 Score=27.13 Aligned_cols=84 Identities=13% Similarity=0.106 Sum_probs=72.3 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 13566777778999999999999999866899999999998999999999864333278889999999999999999999 Q gi|254780523|r 264 GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYM 343 (357) Q Consensus 264 ~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~ 343 (357) ..+.....+.+..|..+...+..+.+.+|+...-++..+++-++.+..|+..-+++.-+|..|+..+-+.+.+-..-+.+ T Consensus 792 Fidn~a~Nkvl~~lntAsstLrsqAsalGsNLsiVQ~RQDFsKnlInVLqTGssNLTlADtNEEAANSQALsTRqSiavS 871 (888) T PRK12688 792 FIDNNATNAVLAKLSTASTTLRSQASAFGSNLSIVQARQDFSKSLINVLQTGSSNLTLADTNEEAANSQALSTRQSIAVS 871 (888) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH T ss_conf 00141478899987777798887777634760356555577788888874476435224443555422455443578888 Q ss_pred HHHH Q ss_conf 9999 Q gi|254780523|r 344 ITTK 347 (357) Q Consensus 344 ~~a~ 347 (357) +.+- T Consensus 872 ALsL 875 (888) T PRK12688 872 ALSL 875 (888) T ss_pred HHHH T ss_conf 8866 No 45 >PRK08147 flgK flagellar hook-associated protein FlgK; Validated Probab=95.59 E-value=0.12 Score=26.61 Aligned_cols=72 Identities=10% Similarity=-0.003 Sum_probs=63.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 999999999986689999999999899999999986433327888999999999999999999999997368 Q gi|254780523|r 280 GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 280 a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) ..+......+.+|...+..+...+..+.....++..+..+.+|++-|+.++|-++|-+|+|+-++.+-+.+| T Consensus 468 ~~~~~~~~vs~ig~~~~~a~~~~~~~~~~~~~l~~~r~svSGVnlDEE~~nLi~~Q~aY~AsArvist~dem 539 (547) T PRK08147 468 FNDAYASLVSDVGNQTATLKTSSTTQANVVTQLTTQQQSVSGVNLDEEYGNLQRFQQYYLANAQVLQTASTL 539 (547) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 999999999999999999999999999999999999984317669999999999999999999999999999 No 46 >PRK08471 flgK flagellar hook-associated protein FlgK; Validated Probab=85.68 E-value=1.9 Score=19.85 Aligned_cols=70 Identities=10% Similarity=-0.029 Sum_probs=62.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 9999999998668999999999989999999998643332788899999999999999999999999736 Q gi|254780523|r 281 LSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 (357) Q Consensus 281 ~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~ 350 (357) .+......+++|......+...+..+.....++..+..+.+|++-||.++|-++|-+|||+-++.+-+.+ T Consensus 533 ~~~y~~lvs~vG~~~~~a~~~~~~~~~~~~~~~~~r~svSGVnlDEE~~nLik~QqaY~AsArvista~e 602 (612) T PRK08471 533 EEYYRFLTGKIASDTEKNNRINDTNKSLLNSVKKEYQSISGVSTDEELTNLIKFQSSYGAAAKIITTVDQ 602 (612) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999999999999999999999998510603999999999999999999999999999 No 47 >COG1256 FlgK Flagellar hook-associated protein [Cell motility and secretion] Probab=83.27 E-value=2.5 Score=19.24 Aligned_cols=72 Identities=13% Similarity=0.039 Sum_probs=61.6 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 999999999986689999999999899999999986433327888999999999999999999999997368 Q gi|254780523|r 280 GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 280 a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) -.+-.....+.+|...+..+...+..+.....++..+..+.++++-|+.++|.+.|-.|+|+-++...+.+| T Consensus 472 ~~d~y~~l~~~i~~~~~~a~~~~~~~~~~l~~~~~~~~S~SGVnlDEE~anLi~~Qq~Y~AsAKvI~tvd~m 543 (552) T COG1256 472 FSDYYAGLVGWIGIKASTASSESDAKEALLNQLTSERQSISGVNLDEEMANLIQFQQAYQASAKVIQTVDEM 543 (552) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 999999888999998887411214799999999999860137787799999999999999999999999999 No 48 >pfam06429 DUF1078 Domain of unknown function (DUF1078). This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus. Probab=75.55 E-value=4.3 Score=17.86 Aligned_cols=31 Identities=10% Similarity=0.078 Sum_probs=27.4 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 7888999999999999999999999997368 Q gi|254780523|r 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 321 daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) ++|+.++.++|-..|..|||..++......+ T Consensus 2 nV~~~~Em~~mi~~qr~yqa~~k~i~~~~em 32 (39) T pfam06429 2 NVDLVEEMVNLIEAQRAYEANAKVIQTADEM 32 (39) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 8878999999999999989999999889999 No 49 >PRK05681 flgC flagellar basal body rod protein FlgC; Reviewed Probab=63.05 E-value=8.4 Score=16.27 Aligned_cols=34 Identities=9% Similarity=0.047 Sum_probs=23.7 Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 3327888999999999999999999999997368 Q gi|254780523|r 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 318 ~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) ..-++|+.++.++|-..+-.|||.+.++....+| T Consensus 96 ~~pNVd~~~Emvdm~~A~R~YeAN~~~~~~~k~m 129 (139) T PRK05681 96 KYPNVNVVVEMVDMISASRSYEANVEVLNAAKSM 129 (139) T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 4289888999999999999999999999999999 No 50 >pfam10498 IFT57 Intra-flagellar transport protein 57. Eukaryotic cilia and flagella are specialized organelles found at the periphery of cells of diverse organisms. Intra-flagellar transport (IFT) is required for the assembly and maintenance of eukaryotic cilia and flagella, and consists of the bidirectional movement of large protein particles between the base and the distal tip of the organelle. IFT particles contain multiple copies of two distinct protein complexes, A and B, which contain at least 6 and 11 protein subunits. IFT57 is part of complex B but is not, however, required for the core subunits to stay associated. This protein is known as Huntington-interacting protein-1 in humans. Probab=62.01 E-value=8.8 Score=16.16 Aligned_cols=50 Identities=10% Similarity=0.164 Sum_probs=19.9 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH Q ss_conf 668999999999989999999998643332788899999999999999999 Q gi|254780523|r 291 LGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 (357) Q Consensus 291 lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas 341 (357) |--..+.+....+++...--.++.++..+..- |.+...+|...+..|+-. T Consensus 239 L~kl~~d~~~~LekI~sREk~lN~ql~~~~~e-yr~~~~~l~~~~~~y~~~ 288 (355) T pfam10498 239 LKKLSQDLSKALEKISSREKHLNNQLEQLVQE-YREARRTLSQVQEKYNQA 288 (355) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH T ss_conf 99999999999999988999998763899999-999999999999999999 No 51 >PRK12631 flgC flagellar basal body rod protein FlgC; Provisional Probab=55.70 E-value=11 Score=15.54 Aligned_cols=35 Identities=9% Similarity=0.077 Sum_probs=21.9 Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 33327888999999999999999999999997368 Q gi|254780523|r 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 317 s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) -..-++|+.++.++|-..+-.|||-..++...++| T Consensus 95 V~~pNVd~~~EMvdm~~A~RsYeANv~~~~~ak~m 129 (138) T PRK12631 95 IYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSM 129 (138) T ss_pred EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 84489888999999999999999999999999999 No 52 >PRK12632 flgC flagellar basal body rod protein FlgC; Provisional Probab=54.03 E-value=12 Score=15.38 Aligned_cols=33 Identities=9% Similarity=0.059 Sum_probs=19.7 Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 327888999999999999999999999997368 Q gi|254780523|r 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 319 l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) .-++|+.++.++|-..+-.|||.+.++...++| T Consensus 88 ~pnVd~~~EMvdm~~AsRsYeANv~v~~t~k~M 120 (130) T PRK12632 88 GSNVDLVIEIADAREAQRSYEANLRMFDQARQM 120 (130) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 899788999999999999999999999999999 No 53 >PRK12782 flgC flagellar basal body rod protein FlgC; Reviewed Probab=52.86 E-value=13 Score=15.27 Aligned_cols=36 Identities=11% Similarity=0.074 Sum_probs=21.7 Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 433327888999999999999999999999997368 Q gi|254780523|r 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 316 ~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) .-..-++|+.++.++|-..+-.|||...++...++| T Consensus 93 yV~~pnVn~~~EMvdm~~AsRsYeANv~v~~tak~m 128 (138) T PRK12782 93 YVKLPNVNMLIEMADMREANRSYEANLQVIKQARAM 128 (138) T ss_pred CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 854689888999999999999999999999999999 No 54 >TIGR01395 FlgC flagellar basal-body rod protein FlgC; InterPro: IPR006299 These sequences represent FlgC, one of several components of bacterial flagella. FlgC is part of the basal body. ; GO: 0019861 flagellum. Probab=49.97 E-value=11 Score=15.59 Aligned_cols=37 Identities=8% Similarity=0.036 Sum_probs=27.0 Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH Q ss_conf 3332788899999999999999999999999736850 Q gi|254780523|r 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 (357) Q Consensus 317 s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~SL 353 (357) -.+=.+|+.+|+.+|-..+-.|||-++++...++|.+ T Consensus 104 V~~PNVn~~~EMVdmi~A~RsYeANv~v~~~~K~m~~ 140 (147) T TIGR01395 104 VKMPNVNVVEEMVDMIEASRSYEANVQVFNTAKSMLL 140 (147) T ss_pred EECCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 7058558543232112002478899999999999999 No 55 >PRK12629 flgC flagellar basal body rod protein FlgC; Provisional Probab=46.92 E-value=16 Score=14.73 Aligned_cols=36 Identities=8% Similarity=0.048 Sum_probs=21.5 Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 433327888999999999999999999999997368 Q gi|254780523|r 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 316 ~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) .-..-++|+.++.++|-..+-.|||-+.++...++| T Consensus 91 yV~~pnVn~~~EMvdm~~AsRsYEANv~~~~~aK~m 126 (135) T PRK12629 91 YVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKEL 126 (135) T ss_pred CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 884689888999999999999999999999999999 No 56 >PRK06802 flgC flagellar basal body rod protein FlgC; Reviewed Probab=45.02 E-value=17 Score=14.56 Aligned_cols=33 Identities=9% Similarity=0.048 Sum_probs=17.8 Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 332788899999999999999999999999736 Q gi|254780523|r 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 (357) Q Consensus 318 ~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~ 350 (357) ..-++|+.++.++|-..+-.|||-+.++...++ T Consensus 98 ~~PnVn~~~EMvdm~~AsRsYeANv~~~~~aK~ 130 (141) T PRK06802 98 FYPDVNVVSEMADMMSASRSFETNVEVLNSVKS 130 (141) T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 468989899999999999999999999999999 No 57 >PRK12630 flgC flagellar basal body rod protein FlgC; Provisional Probab=44.81 E-value=17 Score=14.54 Aligned_cols=35 Identities=9% Similarity=0.005 Sum_probs=19.8 Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 33327888999999999999999999999997368 Q gi|254780523|r 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 317 s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) -..=++|+.++.++|-..+-.|||-+.++...++| T Consensus 100 V~~PnVd~~~EMvdm~~AsRsYEANv~v~~~aK~m 134 (143) T PRK12630 100 VSMPNVNVLNEMADMMASTRSYEANVTAMNAEKSM 134 (143) T ss_pred EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 84689888999999999999999999999999999 No 58 >PRK12628 flgC flagellar basal body rod protein FlgC; Provisional Probab=41.01 E-value=20 Score=14.20 Aligned_cols=34 Identities=9% Similarity=0.112 Sum_probs=18.8 Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 3327888999999999999999999999997368 Q gi|254780523|r 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357) Q Consensus 318 ~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357) ..-++|+.++.++|-..+-.|||-+.++...++| T Consensus 98 ~~pnVn~~~EMvdm~~AsRsYEANv~v~~~aK~M 131 (140) T PRK12628 98 YTSNINYVEEMANIISASRSYQMNIELLNTTKQL 131 (140) T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 3489888999999999999999999999999999 No 59 >PRK06797 flgB flagellar basal body rod protein FlgB; Reviewed Probab=40.08 E-value=20 Score=14.12 Aligned_cols=26 Identities=15% Similarity=0.028 Sum_probs=19.0 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 88899999999999999999999999 Q gi|254780523|r 322 VEQHTAHAQLSTLINKIEMSYMITTK 347 (357) Q Consensus 322 aD~ae~~t~l~~~q~~~qas~~~~a~ 347 (357) ||+-.+.++|...++.|||+++.... T Consensus 99 VD~d~Em~~~a~N~l~Yqas~~~Ln~ 124 (135) T PRK06797 99 VDVTTEMLDLMKANQLYGISINAINT 124 (135) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 57899999999999999999999825 No 60 >PRK06664 fliD flagellar hook-associated protein FliD; Validated Probab=39.54 E-value=21 Score=14.07 Aligned_cols=46 Identities=9% Similarity=0.011 Sum_probs=34.5 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 9999999999999986689999999999899999999986433327 Q gi|254780523|r 276 TVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 (357) Q Consensus 276 ~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~d 321 (357) .|+..++.+...-+.+..+...|+....+++.++..++.++..+|. T Consensus 606 ~l~~~l~~~~~~~G~i~~~~~~l~~~i~~~~~~i~~~~~rl~~~e~ 651 (684) T PRK06664 606 MLLEYLKPYTQAGGIVYNKVKSLDEKIANNNKKVEEYEKKLESRER 651 (684) T ss_pred HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999876568645306667999998999999999999999999 No 61 >PRK06004 flgB flagellar basal body rod protein FlgB; Reviewed Probab=38.11 E-value=22 Score=13.94 Aligned_cols=26 Identities=12% Similarity=0.003 Sum_probs=15.1 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 88899999999999999999999999 Q gi|254780523|r 322 VEQHTAHAQLSTLINKIEMSYMITTK 347 (357) Q Consensus 322 aD~ae~~t~l~~~q~~~qas~~~~a~ 347 (357) ||+.++..++...+..||++.+.+.+ T Consensus 89 Vdle~Em~~~aen~~~Y~~~~~~~~~ 114 (126) T PRK06004 89 VNLEDEMLKVSDNQMDYAAATSLYQK 114 (126) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 46999999999999999999999999 No 62 >PRK06798 fliD flagellar capping protein; Validated Probab=35.77 E-value=24 Score=13.73 Aligned_cols=47 Identities=21% Similarity=0.258 Sum_probs=33.7 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 99999999999999986689999999999899999999986433327 Q gi|254780523|r 275 STVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 (357) Q Consensus 275 ~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~d 321 (357) ..++..++.+....+-+..|...|+....+++.+...++.++..+++ T Consensus 361 ~~l~~~l~~~~~~~G~i~~r~~sl~~~i~~l~~q~~~l~~r~~~~~~ 407 (440) T PRK06798 361 KMMEKPLDKIFGDEGIIGERSKSIDSRVSKLDKKIKDIDTQNKQKQD 407 (440) T ss_pred HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999998652889602207778999999999999999999999999 No 63 >PRK05682 flgE flagellar hook protein FlgE; Validated Probab=33.80 E-value=26 Score=13.54 Aligned_cols=27 Identities=7% Similarity=0.001 Sum_probs=22.6 Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 278889999999999999999999999 Q gi|254780523|r 320 IGVEQHTAHAQLSTLINKIEMSYMITT 346 (357) Q Consensus 320 ~daD~ae~~t~l~~~q~~~qas~~~~a 346 (357) -.+|++++.++|=..|-.|||.-+++. T Consensus 375 SNVDla~E~t~mI~~QRaYqANskvIt 401 (414) T PRK05682 375 SNVDLTTELVDMIVAQRNYQANAKTIK 401 (414) T ss_pred HCCCHHHHHHHHHHHHHHHHHHHEEEE T ss_conf 017799999999999877467403456 No 64 >PRK05680 flgB flagellar basal body rod protein FlgB; Reviewed Probab=30.49 E-value=29 Score=13.23 Aligned_cols=25 Identities=4% Similarity=-0.019 Sum_probs=12.4 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 8889999999999999999999999 Q gi|254780523|r 322 VEQHTAHAQLSTLINKIEMSYMITT 346 (357) Q Consensus 322 aD~ae~~t~l~~~q~~~qas~~~~a 346 (357) ||+.++.++|...++.||++.+... T Consensus 99 Vdle~Em~~~a~N~l~Y~a~~~~l~ 123 (137) T PRK05680 99 VDMDVERTEFAKNSLMYQALLTALN 123 (137) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 0879999999999999999999999 No 65 >PRK12622 flgB flagellar basal body rod protein FlgB; Provisional Probab=29.40 E-value=31 Score=13.12 Aligned_cols=27 Identities=11% Similarity=0.001 Sum_probs=17.7 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 788899999999999999999999999 Q gi|254780523|r 321 GVEQHTAHAQLSTLINKIEMSYMITTK 347 (357) Q Consensus 321 daD~ae~~t~l~~~q~~~qas~~~~a~ 347 (357) .||+-++.++|...++.||+..+..+. T Consensus 99 nVDid~Em~~la~N~l~Y~al~~~l~~ 125 (135) T PRK12622 99 NVDIDSEMKALVQNQMMYHLFTNIQAH 125 (135) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 758899999999999999999999998 No 66 >PRK12621 flgB flagellar basal body rod protein FlgB; Provisional Probab=28.96 E-value=31 Score=13.08 Aligned_cols=26 Identities=8% Similarity=0.001 Sum_probs=14.8 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 88899999999999999999999999 Q gi|254780523|r 322 VEQHTAHAQLSTLINKIEMSYMITTK 347 (357) Q Consensus 322 aD~ae~~t~l~~~q~~~qas~~~~a~ 347 (357) ||+-++.++|...++.||++.+...+ T Consensus 97 Vdid~Em~~la~N~l~Y~a~~~~l~~ 122 (136) T PRK12621 97 VNLDKEMAKMAKNSLQYNALTTVIKG 122 (136) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 65489999999999999999999999 No 67 >PRK12623 flgB flagellar basal body rod protein FlgB; Provisional Probab=27.78 E-value=33 Score=12.96 Aligned_cols=25 Identities=4% Similarity=-0.129 Sum_probs=13.3 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 8889999999999999999999999 Q gi|254780523|r 322 VEQHTAHAQLSTLINKIEMSYMITT 346 (357) Q Consensus 322 aD~ae~~t~l~~~q~~~qas~~~~a 346 (357) +|+-++.++|...++.||+..+..+ T Consensus 96 VDid~Em~~laeN~l~Y~a~~~~l~ 120 (131) T PRK12623 96 VDIDNEMVNQAANTLMYNALITQLN 120 (131) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 7799999999999999999999999 No 68 >PRK12624 flgB flagellar basal body rod protein FlgB; Provisional Probab=26.80 E-value=34 Score=12.85 Aligned_cols=25 Identities=8% Similarity=-0.070 Sum_probs=14.7 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 8889999999999999999999999 Q gi|254780523|r 322 VEQHTAHAQLSTLINKIEMSYMITT 346 (357) Q Consensus 322 aD~ae~~t~l~~~q~~~qas~~~~a 346 (357) ||+-++.++|...++.||+..+..+ T Consensus 106 VDid~Em~~la~N~l~Y~al~~~l~ 130 (143) T PRK12624 106 VDVEKEVVEASNSQMQYMLMIERLN 130 (143) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 6899999999999999999999999 No 69 >PRK13723 conjugal transfer pilus assembly protein TraH; Provisional Probab=26.77 E-value=34 Score=12.85 Aligned_cols=16 Identities=13% Similarity=-0.010 Sum_probs=6.0 Q ss_pred HHHHHHHHHHHHHHHH Q ss_conf 9999999999999998 Q gi|254780523|r 275 STVQQGLSGIIEQRAV 290 (357) Q Consensus 275 ~~l~~a~~~i~~~~a~ 290 (357) ..|.+.+..+....+. T Consensus 373 ~yL~e~l~~~r~al~~ 388 (457) T PRK13723 373 QYIQELIQQARAMLAT 388 (457) T ss_pred HHHHHHHHHHHHHHHC T ss_conf 9999999999999862 No 70 >PRK06003 flgB flagellar basal body rod protein FlgB; Reviewed Probab=26.73 E-value=35 Score=12.85 Aligned_cols=28 Identities=7% Similarity=0.119 Sum_probs=17.5 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 8889999999999999999999999973 Q gi|254780523|r 322 VEQHTAHAQLSTLINKIEMSYMITTKLQ 349 (357) Q Consensus 322 aD~ae~~t~l~~~q~~~qas~~~~a~i~ 349 (357) ||+.++..++...+..|+++.+.+.+-. T Consensus 90 V~le~Em~~~aen~~~Y~~~~~l~~~~~ 117 (126) T PRK06003 90 VSLEQEMMKAGEINRDYSLNTAIVKSFH 117 (126) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 5799999999999999999999999999 No 71 >PRK12627 flgB flagellar basal body rod protein FlgB; Provisional Probab=26.48 E-value=35 Score=12.82 Aligned_cols=15 Identities=0% Similarity=-0.079 Sum_probs=4.6 Q ss_pred HHHHHHHHHHHHHHH Q ss_conf 999999999999999 Q gi|254780523|r 327 AHAQLSTLINKIEMS 341 (357) Q Consensus 327 ~~t~l~~~q~~~qas 341 (357) +..++...+..||++ T Consensus 96 Em~~~aen~~~Y~~~ 110 (128) T PRK12627 96 EMLRSAEAKRQHDRA 110 (128) T ss_pred HHHHHHHHHHHHHHH T ss_conf 999999999999999 No 72 >PRK08724 fliD flagellar capping protein; Validated Probab=26.38 E-value=35 Score=12.81 Aligned_cols=46 Identities=13% Similarity=0.213 Sum_probs=30.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 9999999999999986689999999999899999999986433327 Q gi|254780523|r 276 TVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 (357) Q Consensus 276 ~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~d 321 (357) .++..++.....-+.+-.|.+.|.....++..+...++.++..+|. T Consensus 613 ~l~~~i~~~~~~~G~i~~r~~sl~~~~~~l~d~~~~l~~Rm~~~e~ 658 (686) T PRK08724 613 RVEDAIQSMTGVTGSIRTREKSLREQNYRLNDDQVALDRRMESLEK 658 (686) T ss_pred HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999987631678546446767999998889899999999999999 No 73 >PRK12685 flgB flagellar basal body rod protein FlgB; Reviewed Probab=25.54 E-value=36 Score=12.72 Aligned_cols=28 Identities=18% Similarity=0.036 Sum_probs=19.2 Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 2788899999999999999999999999 Q gi|254780523|r 320 IGVEQHTAHAQLSTLINKIEMSYMITTK 347 (357) Q Consensus 320 ~daD~ae~~t~l~~~q~~~qas~~~~a~ 347 (357) =.||+-++.++|...++.||++.+...+ T Consensus 77 N~Vdld~Em~~~aeN~l~Y~a~~~~l~~ 104 (116) T PRK12685 77 NTVELGKEQARYSQNAMDYQTSLTFLNM 104 (116) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 8537899999999999999999999999 No 74 >PRK12625 flgB flagellar basal body rod protein FlgB; Provisional Probab=23.93 E-value=39 Score=12.54 Aligned_cols=25 Identities=12% Similarity=0.085 Sum_probs=12.6 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 8889999999999999999999999 Q gi|254780523|r 322 VEQHTAHAQLSTLINKIEMSYMITT 346 (357) Q Consensus 322 aD~ae~~t~l~~~q~~~qas~~~~a 346 (357) ||+-++.++|...++.||++.+... T Consensus 95 Vdid~Em~~~aeN~l~Y~a~~~~l~ 119 (132) T PRK12625 95 VDIQQEQSAFMQNALEYQMSLGFLD 119 (132) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 1479999999999999999999999 No 75 >PRK12817 flgG flagellar basal body rod protein FlgG; Reviewed Probab=22.73 E-value=41 Score=12.41 Aligned_cols=32 Identities=6% Similarity=0.007 Sum_probs=26.2 Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 32788899999999999999999999999736 Q gi|254780523|r 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 (357) Q Consensus 319 l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~ 350 (357) --.+|+.+++++|-..|-+||+..++....-+ T Consensus 220 ~SNV~~~~EMv~li~~qRaye~n~k~i~t~De 251 (261) T PRK12817 220 NSNVDLGKEMTDMIITQRAFQLSSKGIKTADE 251 (261) T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 12173999999999999999999899999999 No 76 >PRK08032 fliD flagellar capping protein; Reviewed Probab=21.26 E-value=44 Score=12.24 Aligned_cols=70 Identities=10% Similarity=0.220 Sum_probs=43.5 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999999999986689999999999899999999986433327888999999999999999999999 Q gi|254780523|r 275 STVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMIT 345 (357) Q Consensus 275 ~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~ 345 (357) ..+...++.....-+.+..+...++.....++.++..++.++..+|+. |.+-.+.|......+|+....+ T Consensus 389 ~~~~~~l~~~~~~~G~i~~~~~~l~~~i~~l~~~i~~l~~rl~~~e~~-~~~QFtame~~~~~mnsq~s~L 458 (463) T PRK08032 389 TQIATNLKSWLSTTGIIKAATDGVNKTLKKLTKQYNAVSDSIDATVAR-YKAQFTQLDKMMTSLNSTSSYL 458 (463) T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH T ss_conf 999999998757897201576679999999999999999999999999-9999999999999999899999 No 77 >PRK07182 flgB flagellar basal body rod protein FlgB; Reviewed Probab=20.50 E-value=46 Score=12.14 Aligned_cols=19 Identities=26% Similarity=0.226 Sum_probs=8.8 Q ss_pred HHHHHHHHHHHHHHH--HHHH Q ss_conf 999999865677777--7652 Q gi|254780523|r 112 INAGMLRDSYESFVT--FANM 130 (357) Q Consensus 112 ~~a~e~~~~~~~l~~--~aN~ 130 (357) ..+-.++..+.+++. +||. T Consensus 13 ~~aL~lR~~RqevlAsNIANa 33 (148) T PRK07182 13 PMAMQLRLTRAELLSANLANV 33 (148) T ss_pred HHHHHHHHHHHHHHHHHHHCC T ss_conf 999999999999998612216 No 78 >PRK12641 flgF flagellar basal body rod protein FlgF; Reviewed Probab=20.17 E-value=47 Score=12.10 Aligned_cols=30 Identities=13% Similarity=0.135 Sum_probs=24.8 Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 278889999999999999999999999973 Q gi|254780523|r 320 IGVEQHTAHAQLSTLINKIEMSYMITTKLQ 349 (357) Q Consensus 320 ~daD~ae~~t~l~~~q~~~qas~~~~a~i~ 349 (357) -.+|+.+++++|-..|-+||+..++....- T Consensus 209 SNVd~~~EM~~lI~~qRaye~n~K~i~~~D 238 (252) T PRK12641 209 SNVNLEKNMIEMISNARQFEMQMKIISMCD 238 (252) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 446699999999999999999999999999 Done!