HHsearch results for GI: 254780523 and protein with PDBid: 1io1_A
>1io1_A Phase 1 flagellin; beta-folium, structural protein; 2.00A {Salmonella typhimurium} SCOP: e.32.1.1
Probab=99.96 E-value=6.5e-28 Score=171.39 Aligned_cols=94 Identities=6% Similarity=0.033 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HCC
Q ss_conf 9999999999999999999999999998888999999999999851378889889999999998656777777652-002
Q gi|254780523|r 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANM-TDE 133 (357)
Q Consensus 55 l~~~~~~l~~~~~n~~~a~~~l~~~e~~L~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~-~~~ 133 (357)
++.++..|+|+.+|..++.++++++|++|+++.++|+|||||++|++|+++++.||.++..|+.+|+++|.++++. +|+
T Consensus 1 ~~~qi~gl~qa~~N~~d~~s~~qtae~al~e~~~iL~r~reLavqaan~t~t~~dr~ai~~E~~~L~~ei~~ia~~T~fn 80 (398)
T 1io1_A 1 FTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFN 80 (398)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCBT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 94056559999999999999999999999999999999999999861468999999999999999999999999738148
Q ss_pred CCEEECCCCCCCCCC
Q ss_conf 430410566544321
Q gi|254780523|r 134 GQYLFSGINSSEKPL 148 (357)
Q Consensus 134 g~~~f~G~~~~~~p~ 148 (357)
|.+||.|......|+
T Consensus 81 g~~Ll~Gs~~~~~~~ 95 (398)
T 1io1_A 81 GVKVLAQDNTLTIQV 95 (398)
T ss_dssp TBCTTTSCEEEEEEC
T ss_pred CCCCCCCCCCEEEEE
T ss_conf 834325677369983