HHsearch results for GI: 254780523 and protein with PDBid: 2d4x_A
>2d4x_A Flagellar HOOK-associated protein 3; multi-domain protein, alpha-helical bundle, complex all- beta folds, structural protein; 1.90A {Salmonella typhimurium}
Probab=100.00 E-value=8.6e-37 Score=220.78 Aligned_cols=245 Identities=14% Similarity=0.146 Sum_probs=174.3
Q ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 12899999999999999999999999999999999999988889999999999998513788898899999999986567
Q gi|254780523|r 43 LQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 (357)
Q Consensus 43 sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~L~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~ 122 (357)
||||++++++++|+.+++++++|++|+..+.+||+++|++|.+|.++|+|+||++++++|+++++++|++++.|++++++
T Consensus 2 SDDP~~~~~~~~l~~~~~~l~q~~~N~~~a~s~l~~~d~aL~~i~~il~r~relavqa~n~t~s~~dr~~~~~e~~~l~~ 81 (248)
T 2d4x_A 2 SDDPIAASQAVVLSQAQAQNSQYALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRD 81 (248)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 96889999999999999999999999999999999999999999999999999999851678887789888999999899
Q ss_pred HHHHHHHH-HCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 77777652-00243041056654432122333332222222100010134543222456653211233322100123344
Q gi|254780523|r 123 SFVTFANM-TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLE 201 (357)
Q Consensus 123 ~l~~~aN~-~~~g~~~f~G~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (357)
++..++|+ +++|+|+|+|.+..++||................ .............+...........
T Consensus 82 ~i~~iaN~t~~~g~~lf~G~~~~t~pf~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~g~~~~~~~~~~~ 149 (248)
T 2d4x_A 82 QLMNLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQ------------QVDSARTMVIGHTGAQIFNSITSNA 149 (248)
T ss_dssp HHHHHHTCBCTTSCBTTSTTCTTSCSBCTTTCCBCSCSSCEEE------------ECSSSCEEEESCCHHHHHSCCCTTC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC------------CCCCCCEEEECCCCHHHHCCCCCCC
T ss_conf 9999975102377321367555666310367544453322110------------1366640331233102201333332
Q ss_pred CCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCCCHHHHHHHH-HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 444566543200111566520000025641022320353101123333-3210023344555113566777778999999
Q gi|254780523|r 202 DKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFV-AVIGTEFLSKNLTDGARNVLTKKMLSTVQQG 280 (357)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 280 (357)
...... .......+...... ....................+...+..++.+
T Consensus 150 ~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 201 (248)
T 2d4x_A 150 VPEPDG----------------------------SDSEKNLFVMLDTAIAALKTPVEGNNVEKEKAAAAIDKTNRGLKNS 201 (248)
T ss_dssp CCCTTS----------------------------CCCCCCHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCC----------------------------CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 122455----------------------------4310134566644554101232332013566667788888767789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 99999999986689999999999899999999986433327888999
Q gi|254780523|r 281 LSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 (357)
Q Consensus 281 ~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~daD~ae~ 327 (357)
++.+...|+++|++++||+...++++....+++..+++++|+|||++
T Consensus 202 ~~~v~~~~~~~G~~~~~le~~~~~~~~~~~~~~~~~s~i~d~D~A~v 248 (248)
T 2d4x_A 202 LNNVLTVRAELGTQLSELSTLDSLGSDRALGQKLQMSNLVDVDWNSV 248 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC-----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999998599999999999899999999999877564283349