BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780523|ref|YP_003064936.1| flagellar hook-associated protein FlgL [Candidatus Liberibacter asiaticus str. psy62] (357 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780523|ref|YP_003064936.1| flagellar hook-associated protein FlgL [Candidatus Liberibacter asiaticus str. psy62] gi|254040200|gb|ACT56996.1| flagellar hook-associated protein FlgL [Candidatus Liberibacter asiaticus str. psy62] Length = 357 Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/357 (100%), Positives = 357/357 (100%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN Sbjct: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS Sbjct: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG Sbjct: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM Sbjct: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE Sbjct: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL Sbjct: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 >gi|315122286|ref|YP_004062775.1| flagellar hook-associated protein FlgL [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495688|gb|ADR52287.1| flagellar hook-associated protein FlgL [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 356 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 203/357 (56%), Positives = 259/357 (72%), Gaps = 1/357 (0%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK TG+STSSI +RMNILTK+L+ + KL E +TGQ DYGLQLG++VT I+E+EQEKN Sbjct: 1 MKITGVSTSSILDRMNILTKDLSNNMEKLQHESITGQCWDYGLQLGSKVTDIIEFEQEKN 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 H+ ERL + LV RLS Q H+ + + Q+ + + LL+G D + +L+DS Sbjct: 61 HVTERLRGSELVKTRLSILQKHVEKIDDVYQNALQKMP-LLQGNEDKHAIAQVVSLLQDS 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 ++S + F N T+ G+YLFSGIN+SEKPL YF KDSLAK+SFDQML+ FL+ENSK+L G Sbjct: 120 FQSTIEFFNTTEGGKYLFSGINTSEKPLQDYFAKDSLAKQSFDQMLKDFLKENSKNLPVG 179 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 Q+L+VSSMN QM DFI +LE+KFS+DEYW+ NWSNASD NIKY + ++VS NVN Sbjct: 180 QNLDVSSMNGHQMADFINKLEEKFSNDEYWSKNWSNASDQNIKYHSSNAGNLEVSVNVNS 239 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 IR+ M +VIG EFL+K+LT +RNVL KM S + QG+ + Q A LG SEK I E Sbjct: 240 DAIRNFMLFSVIGVEFLNKDLTTESRNVLNNKMASFIGQGVQDLNHQSAFLGFSEKRIEE 299 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 E FLQ+K NIIDTYI KS+ V+Q+ A L+ LINKI+MSYMIT KLQKLS+LNYL Sbjct: 300 EIKFLQDKMNIIDTYILKSVSVDQYKASVGLTELINKIDMSYMITAKLQKLSLLNYL 356 >gi|163758034|ref|ZP_02165122.1| flagellar hook-associated protein L [Hoeflea phototrophica DFL-43] gi|162284323|gb|EDQ34606.1| flagellar hook-associated protein L [Hoeflea phototrophica DFL-43] Length = 350 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 117/364 (32%), Positives = 195/364 (53%), Gaps = 21/364 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKT+ IS +I M + + KL EE+VTG+ +D GL LGA+ ++ + ++ Sbjct: 1 MKTSFISNLAIQNSMRMTISRGQVEIQKLQEEVVTGRFADIGLSLGAKTSTSVSHHRDVQ 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD- 119 + SN+LVT+RLSTSQ L++M Q M+ ++ G D K + M RD Sbjct: 61 RLETIQDSNALVTQRLSTSQLSLAAMSDAAQQMLEAFIVA-NGTDDEPKLNV---MRRDV 116 Query: 120 --SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQG---FLEENS 174 S E F + N + G+YLFSGIN+ KP++ Y S AK +FD + G F +++ Sbjct: 117 EASLELFTSSINTSVNGEYLFSGINTDVKPVDDYLEPGSGAKAAFDTLFLGHFGFTQDDP 176 Query: 175 KSLLAGQHLEVSSMNAQQMTDFIKQ-LEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 + + + QM +FI LE +F W NWS+ASD NI RI+ E +D Sbjct: 177 AA---------AGITTAQMDNFIDNVLEPEFMGPN-WNTNWSSASDTNISSRIRTNEVVD 226 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI 293 SAN N G+R A+IG E + ++ R + +K + Q ++GI +R+ LG+ Sbjct: 227 SSANANGTGMRSFALAAIIGIELMDSPISSEVRASVNEKAIEYAGQAVTGIDNERSNLGV 286 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 SE + + ++ + I+ +++ GV+ + A ++ +L+ ++E SY +T ++Q+L++ Sbjct: 287 SENRVAKANEAIEAQVRIMKLHLNDIEGVDGYEASTRMQSLLTQVETSYTLTARIQQLNL 346 Query: 354 LNYL 357 +NYL Sbjct: 347 MNYL 350 >gi|222147591|ref|YP_002548548.1| flagellar hook-associated protein FlgL [Agrobacterium vitis S4] gi|221734579|gb|ACM35542.1| flagellar hook-associated protein [Agrobacterium vitis S4] Length = 355 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 112/362 (30%), Positives = 191/362 (52%), Gaps = 12/362 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKT+ IS+ +I M + + K E+ TG+ +D G +LGA+ +S ++ ++ Sbjct: 1 MKTSSISSLTIQNAMRLTISDAQKQMSDAQTEVTTGKYADVGTELGAKTSSAVDLNRDSL 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +NS+V+ RL SQ L ++ M LV L TD+ ++ + Sbjct: 61 RLQSLMDTNSIVSTRLDASQTALDTIASAATTMQSTLV-GLGTSTDSTTLDSAQKTMKSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKD-----SLAKKSFDQMLQGFLEENSK 175 +SF+ AN + G+YLFSGIN+ KP+ Y+ D + AK++FD + G+ Sbjct: 120 MDSFIDAANTSVNGEYLFSGINTDVKPITDYYYIDDDGNETDAKQNFDNLFSGYFG---- 175 Query: 176 SLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVS 235 ++ VS ++A QM DF++ + + D W +NWS A+D + RI E I S Sbjct: 176 --MSPDDDGVSGISADQMDDFMENVLEPSFDGADWTDNWSAATDETMTSRISKNEVIQSS 233 Query: 236 ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISE 295 ++ N G R V+VIG+E L+ N + RN + K + +SGI ++R LG+S+ Sbjct: 234 SSANSDGFRYTGLVSVIGSEMLNGNYSTETRNAMISKAIEYSGLAVSGINDERTQLGLSQ 293 Query: 296 KNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + + L ++ +II+ IS GV+ + A +L+ L + +E SY +T +LQKLS+++ Sbjct: 294 ERVTNANDSLTSQKDIIENQISDLTGVDAYEASTRLNNLQSLVETSYTLTARLQKLSLVD 353 Query: 356 YL 357 YL Sbjct: 354 YL 355 >gi|227820877|ref|YP_002824847.1| flagellar hook-associated protein FlgL [Sinorhizobium fredii NGR234] gi|227339876|gb|ACP24094.1| predicted flagellar hook-associated protein FlgL [Sinorhizobium fredii NGR234] Length = 350 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 103/358 (28%), Positives = 192/358 (53%), Gaps = 9/358 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKT+ +S ++ M + ++ ++ +KL E+ TG+ +D GL+LG+ + ++E Sbjct: 1 MKTSFVSNLAVQNAMRLTIQQGQEELLKLQTEVSTGRHADVGLELGSSTARSVNLQRELA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +NS+VT+RL++SQ L +M + + + LV +G ++ + + + Sbjct: 61 RLETLVDTNSVVTQRLASSQQALGTMAEAAEQVRNTLVTF-KGNDSVDQLSVQKTEIESA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 F AN + G++LF+GIN+ KP Y S AK +FD L ++ N + Sbjct: 120 MSLFTASANTSFNGEFLFAGINTDVKPFEDYAASGSAAKTTFDDALATYMSANGIA---- 175 Query: 181 QHLEVSSMNAQQMTDFIKQ-LEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 +S QM DFI LE ++DD WA +WS AS N+ RI +E + S N Sbjct: 176 ---SMSDFTEAQMEDFITNTLEPLYTDDAQWAGDWSAASSQNMTSRISTSEVVQSSTNAT 232 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 G R +VI +E + +++ R + + L V+Q ++G+ +R+ LGISE + Sbjct: 233 TSGFRMFALASVISSELMDEDIGSEVRAYIGEASLGYVEQAITGLTAERSTLGISEARVE 292 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + L+ + +I+T+I+ GV+ + A +++TL+ ++E SY +T ++Q+LS++++L Sbjct: 293 KANTSLEVQIKLINTHITDLEGVDTYDASTRMNTLLTQMETSYTLTGRIQQLSLIDFL 350 >gi|307318931|ref|ZP_07598362.1| flagellar hook-associated 3 family protein [Sinorhizobium meliloti AK83] gi|306895345|gb|EFN26100.1| flagellar hook-associated 3 family protein [Sinorhizobium meliloti AK83] Length = 347 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 106/358 (29%), Positives = 195/358 (54%), Gaps = 12/358 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKT+ +S ++ M + ++ + +KL E+ TG+ +D GL LG+ + ++E Sbjct: 1 MKTSFVSNLAVQNAMRLTIQQGQAELLKLQTEVTTGRHADVGLALGSSAARSVSLQRELA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +NS+VT+RL+ SQ+ LS+M + Q + LV +G ++ I ++ + Sbjct: 61 RLGTLVDTNSVVTQRLAASQSALSAMAEAAQQVRNTLVTF-KGNDAADQLAIQKTEIQSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +F + AN++ G++LF+GIN+ +P + Y ++ AK +FD L ++ N + Sbjct: 120 MSAFSSAANLSFNGEFLFAGINTDVRPFDDY---NAAAKSTFDTALATYMSANGIA---- 172 Query: 181 QHLEVSSMNAQQMTDFIKQ-LEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 +S +M DFI LE ++ D WA +WS AS N+ RI TE + S N Sbjct: 173 ---SMSDFTKAEMEDFITNTLEPLYASDAQWAADWSKASSQNMTSRISTTEVVQSSTNAT 229 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 G R +VI E + +N++ R + + LS V+Q + I +R+ LGISE + Sbjct: 230 TEGFRKFALASVIALELMDENVSSEVRAYIGEAALSYVEQANTQITAERSTLGISEARVK 289 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + LQ + +I+T+I+ GV+ + A +++TL+ ++E SY +T ++Q+LS++++L Sbjct: 290 KANTSLQAQIKLINTHITDLEGVDTYEASTRMNTLLTQVETSYTLTARIQRLSLIDFL 347 >gi|10998530|gb|AAG25960.1|AF300968_2 FlgL [Sinorhizobium meliloti] Length = 345 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 107/357 (29%), Positives = 192/357 (53%), Gaps = 12/357 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKT+ +S ++ M + ++ + +KL E+ TG+ +D GL LG+ + ++E Sbjct: 1 MKTSFVSNLAVQNAMRLTIQQGQAELLKLQTEVTTGRHADVGLALGSSAARSVSLQRELA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +NS+VT+RL+ SQ+ LS+M + Q + LV +G ++ I ++ + Sbjct: 61 RLGTLVDTNSVVTQRLAASQSALSAMAEAAQQVRNTLVTF-KGNDAADQLAIQKTEIQSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +F + AN++ G++LF+GIN+ +PL Y ++ AK +FD L F+ N + Sbjct: 120 MSAFSSAANLSFNGEFLFAGINTDVRPLEDY---NAAAKSTFDTALATFMSANGIA---- 172 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +S QM DFI + D E WA +WS AS N+ RI TE + S N Sbjct: 173 ---SMSDFTKAQMEDFITNTLEPLYDTE-WAADWSKASSQNMTSRISTTEVVQSSTNATT 228 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R +VI E + +N++ R + + L V+Q + I +R+ LGISE + + Sbjct: 229 EGFRKFALASVIALELMDENVSSEVRAYIGEAALGYVEQANTQITAERSTLGISEARVKK 288 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 LQ + +I+T+I+ GV+ + A +++TL+ ++E SY +T ++Q+LS++++L Sbjct: 289 ANTSLQAQIKLINTHITDLEGVDTYEASTRMNTLLTQVETSYTLTARIQRLSLIDFL 345 >gi|15964434|ref|NP_384787.1| flagellar hook-associated protein FlgL [Sinorhizobium meliloti 1021] gi|307311576|ref|ZP_07591217.1| flagellar hook-associated 3 family protein [Sinorhizobium meliloti BL225C] gi|15073611|emb|CAC45253.1| Putative flagellar hook-associated protein [Sinorhizobium meliloti 1021] gi|306899593|gb|EFN30222.1| flagellar hook-associated 3 family protein [Sinorhizobium meliloti BL225C] Length = 345 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 106/357 (29%), Positives = 192/357 (53%), Gaps = 12/357 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKT+ +S ++ M + ++ + +KL E+ TG+ +D GL LG+ + ++E Sbjct: 1 MKTSFVSNLAVQNAMRLTIQQGQAELLKLQTEVTTGRHADVGLALGSSAARSVSLQRELA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +NS+VT+RL+ SQ+ LS+M + Q + LV +G ++ I ++ + Sbjct: 61 RLGTLVDTNSVVTQRLAASQSALSAMAEAAQQVRNTLVTF-KGNDAADQLAIQKTEIQSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +F + AN++ G++LF+GIN+ +PL Y ++ AK +FD L ++ N + Sbjct: 120 MSAFSSAANLSFNGEFLFAGINTDVRPLEDY---NAAAKSTFDTALATYMSANGIT---- 172 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +S QM DFI + D E WA +WS AS N+ RI TE + S N Sbjct: 173 ---SMSDFTKAQMEDFITNTLEPLYDTE-WAADWSKASSQNMTSRISTTEVVQSSTNATT 228 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R +VI E + +N++ R + + L V+Q + I +R+ LGISE + + Sbjct: 229 EGFRKFALASVIALELMDENVSSEVRAYIGEAALGYVEQANTQITAERSTLGISEARVKK 288 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 LQ + +I+T+I+ GV+ + A +++TL+ ++E SY +T ++Q+LS++++L Sbjct: 289 ANTSLQAQIKLINTHITDLEGVDTYEASTRMNTLLTQVETSYTLTARIQRLSLIDFL 345 >gi|150395505|ref|YP_001325972.1| flagellar hook-associated protein FlgL [Sinorhizobium medicae WSM419] gi|150027020|gb|ABR59137.1| flagellar hook-associated 3 family protein [Sinorhizobium medicae WSM419] Length = 350 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 108/358 (30%), Positives = 195/358 (54%), Gaps = 9/358 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKT+ +S ++ M + ++ + +KL E+ TG+ +D GL LG+ + ++E Sbjct: 1 MKTSFVSNLAVQNAMRLTIQQGQAELLKLQTEVTTGRHADVGLALGSSTARSVSLQRELA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +NS+VT+RL+ SQ+ L++M + Q + LV +G ++ I ++ + Sbjct: 61 RLGTLVDTNSVVTQRLAASQSALAAMAEAAQQVRNTLVTF-KGNDAADQLAIQNTEIQSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +F + AN++ G++LF+GIN+ +P N Y S AK +FD L ++ N + Sbjct: 120 ISAFSSAANLSFNGEFLFAGINTDVRPFNDYSAAGSTAKTTFDNALATYMSANGIA---- 175 Query: 181 QHLEVSSMNAQQMTDFIKQ-LEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 +S QM DFI LE ++ D WA +WS+AS N+ RI TE + SAN Sbjct: 176 ---SMSDFTKAQMEDFITNTLEPLYASDAQWAADWSDASSQNMTSRISTTEVVQSSANAT 232 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 G R +VI E + +N++ R + + L V+Q + I +R+ LGISE + Sbjct: 233 TEGFRKFALASVIALELMDENVSSEVRAYIGEAALGYVEQANTQITAERSTLGISEARVK 292 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + LQ + +I T+I+ GV+ + A +++TL+ ++E SY +T+++Q+LS++++L Sbjct: 293 KANTSLQAQIKLIKTHITDLEGVDTYEASTRMNTLLTQVETSYTLTSRIQRLSLIDFL 350 >gi|110632638|ref|YP_672846.1| flagellar hook-associated protein FlgL [Mesorhizobium sp. BNC1] gi|110283622|gb|ABG61681.1| flagellar hook-associated protein 3 (HAP3) flgL [Chelativorans sp. BNC1] Length = 349 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 101/357 (28%), Positives = 180/357 (50%), Gaps = 9/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK + +STS+I + + + D VK +E+ +G+ +D G LGAR ++E + Sbjct: 1 MKVSFVSTSAISQTLRYQMMRMQADLVKNQKELDSGRLADPGATLGARAGFSFSMDREIS 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +NSL RL+ +Q +L+ + I Q+++ L L G D + + +G R + Sbjct: 61 RLENVIDANSLAANRLTATQNNLTQLTDISQELLATLSAALSGVNDTSI--VKSGATR-A 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 ES + N G+YLF+GIN+ KP+N + S K FD F A Sbjct: 118 LESMTSVLNSNFNGEYLFAGINTDVKPINDFTDPASPNKAQFDAQFLAFFG------FAQ 171 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 S + A Q+ DF+ + + W++ WS ASD I RI E + S N Sbjct: 172 NDPAASGITASQIEDFLDTVIEPAFMGTGWSDAWSGASDEKITSRIAANETAETSTTANG 231 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G+R + + + +EFL L D AR L ++ S V + + I +A +G++E + + Sbjct: 232 AGMRKLAMASAVLSEFLEIPLGDEARQTLYQRTTSLVGEAIPAIASVQAEVGLAETRLQD 291 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ ++ T+I GV+ + A +++ ++ +IE+SY +T+++Q+LS+L YL Sbjct: 292 ATDRISSQIDLFKTFIRDLEGVDPYEASTRVNEILTQIELSYALTSRIQQLSLLRYL 348 >gi|15887921|ref|NP_353602.1| flagellar hook-associated protein FlgL [Agrobacterium tumefaciens str. C58] gi|15155517|gb|AAK86387.1| flagellar hook-associated protein [Agrobacterium tumefaciens str. C58] Length = 367 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 101/376 (26%), Positives = 195/376 (51%), Gaps = 28/376 (7%) Query: 1 MKTTGISTSSIFERM--NILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQE 58 MKT+ IS+ ++ M IL +L + L+ E+ TG+ +D GL LGA L+ ++ Sbjct: 1 MKTSFISSLAMQNSMRSTILKAQL--EMTNLNTELTTGKHADLGLTLGANTARSLDLNRD 58 Query: 59 KNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLR 118 + I+ + NS+ T+RL +SQ L M K Q++ V++ ++ + + Sbjct: 59 IDRISSLVSVNSIATQRLKSSQTALDGMAKAAQEIQK--VLVPNTSSEAPTLTTVSQTIS 116 Query: 119 DSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLL 178 +++ +F +FAN G++LFSGIN+ KP++ YF S K +++ L F+ + + Sbjct: 117 NAFNNFTSFANTAVNGEFLFSGINTDVKPVDDYFADGSPLKAAYETELNAFMAAQTPPVG 176 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDD-----------------EYWANNWSNASDHN 221 + +S++ Q+ F+ +E F ++W S AS+ N Sbjct: 177 -----DFASLSKTQVEGFMTHIEGVFKGTTTVTNPPHTSLTAGQNYDFWTTFGSKASNTN 231 Query: 222 IKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGL 281 + RI E ++ S+N N +G+R A+ FL + G R ++ K ++ + + Sbjct: 232 MTSRISQNEIVETSSNSNSQGMRYFALTAMTSMTFLDPKVDSGIREMVAMKSVTNIGTAI 291 Query: 282 SGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 +G+ +Q++ LG+SE +++ L+ + II+T++ G++ + A +L L +IE++ Sbjct: 292 NGLNQQQSQLGLSESRVSKANDSLEAQKKIIETHLLDIEGIDTYEAKTRLDLLQQQIEIA 351 Query: 342 YMITTKLQKLSILNYL 357 Y +T++LQK+S++NYL Sbjct: 352 YSLTSRLQKMSLVNYL 367 >gi|86356332|ref|YP_468224.1| flagellar hook-associated protein FlgL [Rhizobium etli CFN 42] gi|86280434|gb|ABC89497.1| flagellar hook-assosiated protein [Rhizobium etli CFN 42] Length = 350 Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 104/361 (28%), Positives = 177/361 (49%), Gaps = 15/361 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK++ IS+S+I M + ++ K E TG +D G+ LG +++ +E + Sbjct: 1 MKSSFISSSAIQNAMRLTIRQAQNQMTKATMEATTGVYADIGVSLGGNAARSVDFTRETD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 I SNSLVT R+ +SQ LS M+ + +V L L +G D + + Sbjct: 61 RIDSIKSSNSLVTARMESSQLGLSKMKDVGDGLVSKLTAL-QGSHDPGSITVAIQSATSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLA-KKSFDQMLQGFLEENSKSLLA 179 + + AN G+YLFSGIN+ +PL T S A + + G + + Sbjct: 120 LSTMMDTANTVVNGEYLFSGINTDVQPLTDKTTATSAAIVTALNTYAAGLVPPKA----- 174 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANN---WSNASDHNIKYRIKDTEGIDVSA 236 VS + +M+ FI + + W N WS AS N+ RI ++E I+ S Sbjct: 175 -----VSDLTGAEMSTFITTTVEPMFSEASWTNTTTGWSQASSQNMTSRISNSEVIESST 229 Query: 237 NVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEK 296 N N G+R + +V+ T L +NL+ A ++K+ +S + SG++ Q + LG+S++ Sbjct: 230 NANSEGMRYMALASVMTTALLGQNLSTDAMTTVSKQAISYTAKATSGLVTQASQLGLSQE 289 Query: 297 NINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 + + L ++NII + GV+ + A + TL ++E +Y I +K+Q+LS++NY Sbjct: 290 RVKKSNDALDAQSNIIKNKLVDLQGVDPYEASTLVKTLETQLETAYTIVSKIQQLSLVNY 349 Query: 357 L 357 L Sbjct: 350 L 350 >gi|325291964|ref|YP_004277828.1| flagellar hook-associated protein FlgL [Agrobacterium sp. H13-3] gi|325059817|gb|ADY63508.1| flagellar hook-associated protein FlgL [Agrobacterium sp. H13-3] Length = 367 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 99/376 (26%), Positives = 192/376 (51%), Gaps = 28/376 (7%) Query: 1 MKTTGISTSSIFERM--NILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQE 58 MKT+ IS+ ++ M IL +L + L+ E+ TG+ +D G+ LGA L+ ++ Sbjct: 1 MKTSFISSLAMQNSMRSTILKAQL--EMTNLNTELTTGKHADLGVTLGANTARSLDLNRD 58 Query: 59 KNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLR 118 + ++ + NS+ T+RL +SQA L M K Q++ V++ + A + Sbjct: 59 VDRLSSLVSVNSIATQRLKSSQAALDGMAKAAQEIQK--VLVPNTSSAAPTLATVAKTIS 116 Query: 119 DSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLL 178 +++ +F FAN G++LFSGIN+ KP++ YF + S K +++ L F+ + ++ Sbjct: 117 NAFNTFTGFANTAVSGEFLFSGINTDVKPIDDYFAEGSTLKAAYEVELNAFMAAQTPAVG 176 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDD-----------------EYWANNWSNASDHN 221 ++ ++ Q F+ ++E F+ ++W S ASD N Sbjct: 177 -----NIADLSKDQAAAFMTRIEGVFNGTTPVTNPPHSDLTAGQNYDFWTTYGSKASDTN 231 Query: 222 IKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGL 281 + RI E ++ S N N +G+R A+ FL + R ++ + ++ + + Sbjct: 232 MTSRISQNEVVETSTNSNSQGMRYFAMTAMTAMTFLDDKVPSDVRELVATRSVTNIGTVI 291 Query: 282 SGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 SG+ +Q++ LG+SE +++ L + II+T++ G++ + +L L +IE++ Sbjct: 292 SGLNQQQSQLGLSESRVSKANDSLAAQKKIIETHLLDIEGIDTYEVKTRLDLLQQQIEIA 351 Query: 342 YMITTKLQKLSILNYL 357 Y +T++LQK+S++NYL Sbjct: 352 YSLTSRLQKMSLVNYL 367 >gi|170744545|ref|YP_001773200.1| flagellar hook-associated protein FlgL [Methylobacterium sp. 4-46] gi|168198819|gb|ACA20766.1| flagellar hook-associated 3 family protein [Methylobacterium sp. 4-46] Length = 344 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 96/358 (26%), Positives = 171/358 (47%), Gaps = 15/358 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+T+ IST S++ T L +S K +E+ +G+ +D GL+LG+RV+ L +++ Sbjct: 1 MQTSYISTQSLWNAPRSATARLQAESAKATQEVASGRYADVGLELGSRVSVSLALRGQQD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +A N L RL +QA L +Q D + L+ G + + K + + Sbjct: 61 QLAALKQDNGLTALRLDQTQATLKQLQAAADDTLKQLL----GASIDKKVSTISTLAATQ 116 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYF-TKDSLAKKSFDQMLQGFLEENSKSLLA 179 + + N GQYLF+G+N+ + PL Y + S AK + DQ Q Sbjct: 117 LAALTSALNGAANGQYLFAGLNTDKAPLTAYAGSPTSPAKAAVDQAFQAAFGSA------ 170 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 + +++ QMT F+ + D+ +W WS+AS + RI E S + N Sbjct: 171 ----DPATITPAQMTAFLNGPLAQLFDEAHWTATWSSASSDALTSRIAPDETARTSVSAN 226 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 IR + V+ + + ++ + V+ K+ S + QG G++ +A LG + I Sbjct: 227 AEPIRSLAMAYVLASALKADTMSAATQTVIADKITSLLSQGSQGLVGLQADLGTVQARIK 286 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + ++I + I GV+ A +L L +I+MSY +T++L++LS++NYL Sbjct: 287 DANTRMDAQKSLIASRIDDLEGVDPAEAKTRLDRLNAQIQMSYSLTSQLRQLSLVNYL 344 >gi|190890384|ref|YP_001976926.1| flagellar hook-assosiated protein [Rhizobium etli CIAT 652] gi|190695663|gb|ACE89748.1| flagellar hook-assosiated protein [Rhizobium etli CIAT 652] gi|327193061|gb|EGE59973.1| flagellar hook-assosiated protein [Rhizobium etli CNPAF512] Length = 350 Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 102/361 (28%), Positives = 173/361 (47%), Gaps = 15/361 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK++ IS+++I M + ++ K E TG +D G+ LG +++ +E + Sbjct: 1 MKSSFISSTAIQSAMRLTIRQAQNQMTKATMEATTGVYADIGVSLGGNAARSVDFTRETD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 I SNSLV+ R+ +SQ LS M+ + +V L L +G D + + Sbjct: 61 RIDSIKSSNSLVSARMESSQLGLSKMKDVGDGLVSKLTAL-QGSHDPGSITVAIQSATSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLA-KKSFDQMLQGFLEENSKSLLA 179 + + AN G+YLFSGIN+ +PL T S A + + G + S L Sbjct: 120 LSTMMDTANTMVNGEYLFSGINTDVQPLTDKTTATSAAIVTALNSYAAGLAPPKAVSDLT 179 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN---NWSNASDHNIKYRIKDTEGIDVSA 236 G +E FI + W N WS AS N+ RI ++E I+ S Sbjct: 180 GTEMET----------FITTTVEPMFSQANWTNAATGWSQASSQNMTSRISNSEVIESST 229 Query: 237 NVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEK 296 N N G+R +V+ + L +NL+ A ++K+ +S + SG++ Q + LG+S++ Sbjct: 230 NANSEGMRYFALASVMTSALLGQNLSTDAMTTVSKQAISYTAKATSGLVTQASQLGLSQE 289 Query: 297 NINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 + + L ++NII + GV+ + A + TL ++E +Y I +K+Q+LS++NY Sbjct: 290 RVKKSNDALDAQSNIIKNKLVDLQGVDPYEASTLVKTLETQLETAYTIVSKIQQLSLVNY 349 Query: 357 L 357 L Sbjct: 350 L 350 >gi|209547948|ref|YP_002279865.1| flagellar hook-associated protein FlgL [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533704|gb|ACI53639.1| flagellar hook-associated 3 family protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 350 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 102/361 (28%), Positives = 174/361 (48%), Gaps = 15/361 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK++ IS+S+I M + ++ K E TG +D G+ LG +++ +E + Sbjct: 1 MKSSFISSSAIQNAMRLTIRQGQNQMTKATMEATTGVYADIGVSLGGNAARSVDFTRETD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 I SNSLV R+ +SQ LS M+ + +V L L +G D + + Sbjct: 61 RIDSIKASNSLVAARMESSQLGLSKMKDVGDGLVSKLTAL-QGSHDPGSVTVAIQSATSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLA-KKSFDQMLQGFLEENSKSLLA 179 + + AN G+YLFSGIN+ +PL T S A + + G + S L Sbjct: 120 LSTMMDTANTMVNGEYLFSGINTDVQPLTDKTTATSAAIVTALNSYAAGLAPPKAVSALT 179 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN---NWSNASDHNIKYRIKDTEGIDVSA 236 G +E FI + W N WS AS N+ RI ++E I+ S Sbjct: 180 GAEMET----------FITGTVEPMFSQANWTNATTGWSQASSQNMTSRISNSEVIESST 229 Query: 237 NVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEK 296 N N G+R + +V+ + L +NL+ A + ++K+ ++ + SG++ Q + LG+S++ Sbjct: 230 NANSEGMRYMALASVMTSALLGQNLSSDAMSTVSKQAITYTTKATSGLVTQASQLGLSQE 289 Query: 297 NINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 + + L ++NII + GV+ + A + TL ++E +Y I +K+Q+LS++NY Sbjct: 290 RVKKSNDALDAQSNIIKNKLVDLQGVDPYEASTLVKTLETQLETAYTIVSKIQQLSLVNY 349 Query: 357 L 357 L Sbjct: 350 L 350 >gi|116250502|ref|YP_766340.1| flagellar hook-associated protein FlgL [Rhizobium leguminosarum bv. viciae 3841] gi|115255150|emb|CAK06224.1| putative flagellar hook-associated protein [Rhizobium leguminosarum bv. viciae 3841] Length = 348 Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 103/360 (28%), Positives = 175/360 (48%), Gaps = 15/360 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK++ IS+S+I M + ++ K E TG +D G+ LG +++ +E + Sbjct: 1 MKSSFISSSAIQNAMRLTIRQAQNQMTKATMEATTGVYADIGVSLGGNAARSVDFSREVD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 IA SNSLVT R+ +SQ LS M+ + +V L L +G D + + Sbjct: 61 RIASIKSSNSLVTARMESSQLGLSKMKDVGDGLVSKLTAL-QGSHDPGSITVAIQSATSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + AN G+YLFSGIN+ +PL D A S D + + G Sbjct: 120 LSTMMDTANTMVNGEYLFSGINTDVQPLT-----DKTAATSAD------IVTALNTYATG 168 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN---NWSNASDHNIKYRIKDTEGIDVSAN 237 VS + +M FI + + W + WS AS N+ RI ++E I+ S N Sbjct: 169 LGKSVSDLTGTEMETFITTTVEPMFTEAAWTDPTTGWSQASSQNMTSRISNSEVIESSTN 228 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 N G+R +V+ + L + L+ A + ++K+ +S + SG++ Q + LG+S++ Sbjct: 229 ANSEGMRYFALASVMTSALLGQGLSSDAMSTVSKQAISYTTKATSGLVTQASQLGLSQER 288 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + L ++NII + GV+ + A + TL ++E +Y I +K+Q+LS++NYL Sbjct: 289 VKKSNDALDAQSNIIKNKLVDLQGVDPYEASTLVKTLETQLETAYTIVSKIQQLSLVNYL 348 >gi|241203126|ref|YP_002974222.1| flagellar hook-associated protein FlgL [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857016|gb|ACS54683.1| flagellar hook-associated 3 family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 350 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 105/361 (29%), Positives = 179/361 (49%), Gaps = 15/361 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK++ IS+S+I M + ++ K E TG +D G+ LG +++ +E + Sbjct: 1 MKSSFISSSAIQNAMRLTIRQAQNQMTKATMEATTGVYADIGVSLGGNAARSVDFSREVD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 I SNSLVT R+ +SQ LS M+ + +V L L +G D + + Sbjct: 61 RIDSIKSSNSLVTARMESSQLGLSKMKDVGDGLVSKLTAL-QGSHDPGSITVAIQSATSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + AN G+YLFSGIN+ +PL T S A E N+ + Sbjct: 120 LSTMMDTANTMVNGEYLFSGINTDVQPLTDKTTATSAAI---------VTELNTYAAALV 170 Query: 181 QHLEVSSMNAQQMTDFIK-QLEDKFSDDEYWAN---NWSNASDHNIKYRIKDTEGIDVSA 236 VS++ +M+ FI ++E FS W + WS AS N+ RI ++E I+ S Sbjct: 171 PPKAVSALTGAEMSTFITTKVEPMFSQ-AAWTDPTTGWSQASSQNMTSRISNSEVIESST 229 Query: 237 NVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEK 296 N N G+R +V+ + L + L+ A + ++K+ +S + SG++ Q + LG+S++ Sbjct: 230 NANSEGMRYFALASVMTSALLGQGLSSDAMSTVSKQAISYTTKATSGLVTQASQLGLSQE 289 Query: 297 NINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 + + L ++NII + GV+ + A + TL ++E +Y I +K+Q+LS++NY Sbjct: 290 RVKKSNDALDAQSNIIKNKLVDLQGVDPYEASTLVKTLETQLETAYTIVSKIQQLSLVNY 349 Query: 357 L 357 L Sbjct: 350 L 350 >gi|319781663|ref|YP_004141139.1| flagellar hook-associated protein FlgL [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167551|gb|ADV11089.1| flagellar hook-associated protein FlgL [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 347 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 96/358 (26%), Positives = 177/358 (49%), Gaps = 17/358 (4%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T +S+++I M + + VK +E TG+ +D GL LG R T + ++++ + + Sbjct: 2 TSVSSAAISNAMRSQQMRMQAELVKATKESSTGRVADVGLALGGRTTQAVTFQRDLDRLN 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + SN LV RLS++Q L + Q L L + ++ + + + + Sbjct: 62 VIIDSNGLVGARLSSTQTSLGQLSTAAQTF---LSALTTASSSDSSNSLTQSSGKATIQQ 118 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEENSKSLLAG 180 + N + G+YLF+G N+ KP+N + S AK +FD GF +++ + Sbjct: 119 LTSILNTSVNGEYLFAGTNTDVKPINDFTAAGSPAKAAFDAAFVANFGFTQDDPLA---- 174 Query: 181 QHLEVSSMNAQQMTDFIK-QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 + + A QM DFI + +F+ W NWSNA+D I RI E S + N Sbjct: 175 -----ADITAAQMDDFITNDVAPQFTG-AGWQGNWSNATDQQIVSRIALNETTPTSTSAN 228 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 GI+ + A + + +S N++ A+N + + + V + LSGI + ++ GI +K ++ Sbjct: 229 SAGIQKLAMAAAMVSSLMSSNISQAAKNTVVSRSTTLVGEALSGIGQLQSETGIVQKRVS 288 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ + ++ + +I V+ A +++ L IE S+ +T +LQ+LS+LNYL Sbjct: 289 DANDRMKTQVDLFERHILDLEAVDPAEAATRVADLTQHIETSFALTARLQQLSLLNYL 346 >gi|218462423|ref|ZP_03502514.1| flagellar hook-associated protein FlgL [Rhizobium etli Kim 5] Length = 332 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/333 (28%), Positives = 162/333 (48%), Gaps = 13/333 (3%) Query: 28 KLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQ 87 K E TG +D G+ LG +++ +E + I SNSLV+ R+ +SQ LS M+ Sbjct: 10 KATMEATTGVYADIGVSLGGNAARSVDFTRETDRIDSIKASNSLVSARMESSQLGLSKMK 69 Query: 88 KIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKP 147 + +V L L +G D + + + + AN G+YLFSGIN+ +P Sbjct: 70 DVGDGLVSKLTAL-QGSKDPGSITVAIQSATSALSTMMDTANTMVNGEYLFSGINTDVQP 128 Query: 148 LNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDD 207 L T S A + L + +L+ + VS + +M FI + Sbjct: 129 LTDKTTATSAA-------IVTALNSYAAALVPPKA--VSDLTGAEMQTFITTTVEPMFSQ 179 Query: 208 EYWAN---NWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDG 264 W N WS AS N+ RI ++E I+ S N N G+R +V+ + L +NL+ Sbjct: 180 ANWTNAATGWSQASSQNMTSRISNSEVIESSTNANSEGMRYFALASVMTSALLGQNLSTD 239 Query: 265 ARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQ 324 A ++K+ +S + SG++ Q + LG+S++ + + L ++NII + GV+ Sbjct: 240 AMTTVSKQAISYTAKATSGLVTQASQLGLSQERVKKSNDALDAQSNIIKNKLVDLQGVDP 299 Query: 325 HTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + A + TL ++E +Y I +K+Q+LS++NYL Sbjct: 300 YEASTLVKTLETQLETAYTIVSKIQQLSLVNYL 332 >gi|260466601|ref|ZP_05812789.1| flagellar hook-associated 3 family protein [Mesorhizobium opportunistum WSM2075] gi|259029607|gb|EEW30895.1| flagellar hook-associated 3 family protein [Mesorhizobium opportunistum WSM2075] Length = 347 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 94/355 (26%), Positives = 170/355 (47%), Gaps = 11/355 (3%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T +S++++ + D VK +E TG+ +D GL LG R + + ++ + + Sbjct: 2 TSVSSAALSNAARYQQMRMQADLVKATKESSTGRIADVGLALGGRTAQSVTFSRDLDRLN 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + SN LV RLS++Q L + + Q + L G +N + + + + Sbjct: 62 VIVDSNGLVAARLSSTQTSLGQLSSVAQTFLSSLTTASSG---DNSDSLTQSTGQTTIQQ 118 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + N + G+YLF+G N+ KP+N + S AK +FD LA Sbjct: 119 LASILNTSVNGEYLFAGTNTDVKPINDFTAPGSPAKAAFDASFVANFGFPPNDPLA---- 174 Query: 184 EVSSMNAQQMTDFIK-QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG 242 +++ A QM DFI +E +F W N SNA+D I RI E + S N G Sbjct: 175 --ANITAAQMDDFITNDVEPQFLG-SGWQTNMSNATDQQIVSRIALNETTETSTGANSDG 231 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 I+ + A + + +S N++ A++ + + V + LSGI + ++ GI +K +++ Sbjct: 232 IKKLAMAAAMVSSLMSTNISQAAKDTIVSRSQILVGEALSGIAQVQSETGIVQKRVSDAS 291 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + ++ + +I V+ A +++ L IE S+ +T +LQ+LS+LNYL Sbjct: 292 DRMKTQVDLFERHILDLEAVDPAEAATRVADLTQHIETSFALTARLQQLSLLNYL 346 >gi|13472594|ref|NP_104161.1| flagellar hook-associated protein FlgL [Mesorhizobium loti MAFF303099] gi|14023340|dbj|BAB49947.1| flagellar hook-associated protein 3 (HAP3); FlgL [Mesorhizobium loti MAFF303099] Length = 347 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 97/358 (27%), Positives = 177/358 (49%), Gaps = 17/358 (4%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T +S++++ M + D VK +E TG+ +D GL LG R + + ++ + + Sbjct: 2 TSVSSAALTNAMRYQQMRMQADLVKATKESSTGRVADVGLALGGRTAQSVTFSRDLDRLN 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + SN LVT RL+++Q L + + Q + L G ++N + G+ + + Sbjct: 62 VIVDSNGLVTARLASTQTSLGQLSGVAQTFLSALTTASSGD-NSNSLTQSTGLT--TLQQ 118 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEENSKSLLAG 180 + N + G+YLF+G N+ KP+N + S AK +FD GF + + Sbjct: 119 LTSILNTSVNGEYLFAGTNTDVKPINDFTAAGSAAKAAFDASFVAKFGFTPTDPAA---- 174 Query: 181 QHLEVSSMNAQQMTDFIK-QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 +++ A QM DFI + +F W N SNA+D I RI E + S + N Sbjct: 175 -----ANITAAQMDDFITNDVAPQFLG-AGWQTNMSNATDQQIVSRIALNETTETSTSAN 228 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 GIR + A + + +S N++ A++ + + V + LSGI + ++ GI +K ++ Sbjct: 229 SDGIRKLAMAAAMVSSLMSSNISRAAKDSIVTHSQTLVGEALSGIAQVQSETGIVQKRVS 288 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ + ++ + +I V+ TA +++ L IE S+ +T +LQ+LS+LNYL Sbjct: 289 DASDRMKTQIDLFERHILDLEAVDPATAATRVADLTQHIETSFALTARLQQLSLLNYL 346 >gi|300024586|ref|YP_003757197.1| flagellar hook-associated 3 family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526407|gb|ADJ24876.1| flagellar hook-associated 3 family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 351 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 110/369 (29%), Positives = 179/369 (48%), Gaps = 32/369 (8%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 + T ISTS++ + V + +E+ TG+ +D GL LGA+ + Q+ + Sbjct: 2 LTPTFISTSALSSETKASIARIQHRLVDVQKELATGRHADVGLTLGAQTGVAVSLRQDIS 61 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKF--PINAGMLR 118 I +NSLV R+ SQA L+++ Q + L T + NA M Sbjct: 62 QIQSIKDTNSLVLTRMQASQAALNTLATTSQSFLNALTPAQSTSTMSGTIVQQANAAM-- 119 Query: 119 DSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLL 178 +S N + +GQYLFSGINS KPL+ YF A + F+ +K + Sbjct: 120 ---QSIQDQLNSSLDGQYLFSGINSDVKPLDDYFANPPAASAQ--AVNAAFV---AKFGM 171 Query: 179 AGQHLEVSSMNAQQMTDFIK-QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSAN 237 + VS+++A M DF++ + D FSD W+ NWS+ASD ++ RI TE + S Sbjct: 172 SPSDPGVSAISASDMQDFLQNEFADLFSDPN-WSANWSDASDKSVNSRISRTETANTSVT 230 Query: 238 VNMRGIRDI--MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISE 295 N + R + F V G F +NL +NV+ ++ V G+ G+ +A LG+++ Sbjct: 231 ANDQTFRQLTQAFAMVAGLGF--QNLNSSTQNVVLQQATQLVSNGIGGLTRVQAFLGVTQ 288 Query: 296 KNINEERVFLQNKNNIIDT---YISKSIG----VEQHTAHAQLSTLINKIEMSYMITTKL 348 + +++ N+ IDT ++ KSI V+ Q+S L +E +Y +T +L Sbjct: 289 QRVSD-------ANDQIDTQIDFLEKSISNLESVDPAEVTTQISDLSTALEAAYSVTNRL 341 Query: 349 QKLSILNYL 357 KLSI+++L Sbjct: 342 SKLSIMDFL 350 >gi|222084887|ref|YP_002543416.1| flagellar hook-assosiated protein [Agrobacterium radiobacter K84] gi|221722335|gb|ACM25491.1| flagellar hook-assosiated protein [Agrobacterium radiobacter K84] Length = 331 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/326 (29%), Positives = 169/326 (51%), Gaps = 12/326 (3%) Query: 32 EMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQ 91 E TG +D G+ LG+ S + ++ I L SNS+V +R+++SQ LS M Q Sbjct: 18 EATTGVYADIGVSLGSGTASNVNLTRDVTRIDSILSSNSVVNQRMTSSQTALSDMSSQAQ 77 Query: 92 DMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGY 151 + LV L G +D++ + + SFV AN G+YLF+G N+ +P+ Sbjct: 78 KFMDQLVAL-RGNSDDSSIQLTQQTATATMSSFVADANTMVNGEYLFAGTNTDVQPM--- 133 Query: 152 FTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA 211 T +S A + +Q L + + + Q + +S + QM DFI + + + Sbjct: 134 -TDNSTAATT---AIQSALSDYATA----QGVAISDLTGDQMKDFITNVAEPLVTSDSSW 185 Query: 212 NNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTK 271 ++WS+ASD N+ RI ++E I+ S N N G+R + + + + L+ A N +T Sbjct: 186 SDWSSASDQNMSSRISNSEVIESSTNANATGMRYLALSTTVANALMGQGLSQDALNAVTD 245 Query: 272 KMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQL 331 + S +Q + G+ Q + LG+S+ + + L + II+T IS GV+ + A ++ Sbjct: 246 QATSYARQAIDGLNNQASQLGLSQARLTDANTSLNAQKTIINTNISDLTGVDAYEASTKV 305 Query: 332 STLINKIEMSYMITTKLQKLSILNYL 357 ++L ++E +Y I +K+Q+LS++NYL Sbjct: 306 NSLQTQLETAYTIVSKIQQLSLVNYL 331 >gi|254695091|ref|ZP_05156919.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 3 str. Tulya] gi|261215442|ref|ZP_05929723.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 3 str. Tulya] gi|260917049|gb|EEX83910.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 3 str. Tulya] Length = 348 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/364 (27%), Positives = 171/364 (46%), Gaps = 24/364 (6%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN-AGMLRD 119 ++ N LV +R++ +Q + + Q+ +G L G ++ + A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA----GANNSGETAKTVAKSARS 116 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEENSKS 176 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q GF ++ Sbjct: 117 MLDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFGFAMDDP-- 173 Query: 177 LLAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSNASDHNIKYRIKDTEGID 233 +V++++ +M F LE F++ D WA NWS+ASD IK RI TE D Sbjct: 174 -------QVANISGDEMKAF---LEGDFAEQFNDANWAANWSDASDTRIKSRISPTETAD 223 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI 293 S + N+ G R + AV+ TEF L A + LT + L Q ++ ++ LG+ Sbjct: 224 TSISANVDGFRKTVMSAVMVTEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGL 283 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ + + I++ + V+ + A +++ L +IE SY +T +LQ +S+ Sbjct: 284 AQSRTEAATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSL 343 Query: 354 LNYL 357 LNYL Sbjct: 344 LNYL 347 >gi|17988505|ref|NP_541138.1| flagellar hook-associated protein FlgL [Brucella melitensis bv. 1 str. 16M] gi|23500852|ref|NP_700292.1| flagellar hook-associated protein FlgL [Brucella suis 1330] gi|62317955|ref|YP_223808.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 1 str. 9-941] gi|83269932|ref|YP_419223.1| flagellar hook-associated protein FlgL [Brucella melitensis biovar Abortus 2308] gi|161621180|ref|YP_001595066.1| flagellar hook-associated protein FlgL [Brucella canis ATCC 23365] gi|163845455|ref|YP_001623110.1| flagellar hook-associated protein FlgL [Brucella suis ATCC 23445] gi|189023206|ref|YP_001932947.1| flagellar hook-associated protein FlgL [Brucella abortus S19] gi|225686883|ref|YP_002734855.1| flagellar hook-associated protein FlgL [Brucella melitensis ATCC 23457] gi|254691613|ref|ZP_05154867.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 6 str. 870] gi|254699260|ref|ZP_05161088.1| flagellar hook-associated protein FlgL [Brucella suis bv. 5 str. 513] gi|254711816|ref|ZP_05173627.1| flagellar hook-associated protein FlgL [Brucella ceti M644/93/1] gi|254714885|ref|ZP_05176696.1| flagellar hook-associated protein FlgL [Brucella ceti M13/05/1] gi|254731632|ref|ZP_05190210.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 4 str. 292] gi|256015896|ref|YP_003105905.1| flagellar hook-associated protein [Brucella microti CCM 4915] gi|256042864|ref|ZP_05445810.1| flagellar hook-associated protein FlgL [Brucella melitensis bv. 1 str. Rev.1] gi|256112178|ref|ZP_05453099.1| flagellar hook-associated protein FlgL [Brucella melitensis bv. 3 str. Ether] gi|256256800|ref|ZP_05462336.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 9 str. C68] gi|256261980|ref|ZP_05464512.1| flagellar hook-associated protein [Brucella melitensis bv. 2 str. 63/9] gi|260544140|ref|ZP_05819961.1| flagellar hook-associated protein [Brucella abortus NCTC 8038] gi|260564101|ref|ZP_05834586.1| flagellar hook-associated protein [Brucella melitensis bv. 1 str. 16M] gi|260568716|ref|ZP_05839185.1| flagellar hook-associated protein [Brucella suis bv. 4 str. 40] gi|260757244|ref|ZP_05869592.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 6 str. 870] gi|260759391|ref|ZP_05871739.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 4 str. 292] gi|260883048|ref|ZP_05894662.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 9 str. C68] gi|261216575|ref|ZP_05930856.1| flagellar hook-associated protein FlgL [Brucella ceti M13/05/1] gi|261319445|ref|ZP_05958642.1| flagellar hook-associated protein FlgL [Brucella ceti M644/93/1] gi|261749700|ref|ZP_05993409.1| flagellar hook-associated protein FlgL [Brucella suis bv. 5 str. 513] gi|265989299|ref|ZP_06101856.1| flagellar hook-associated protein FlgL [Brucella melitensis bv. 1 str. Rev.1] gi|265993605|ref|ZP_06106162.1| flagellar hook-associated protein FlgL [Brucella melitensis bv. 3 str. Ether] gi|294852966|ref|ZP_06793638.1| flagellar hook-associated protein 3 FlgL [Brucella sp. NVSL 07-0026] gi|297250153|ref|ZP_06933854.1| flagellar hook-associated protein 3 FlgL [Brucella abortus bv. 5 str. B3196] gi|17984297|gb|AAL53402.1| flagellar hook-associated protein 3 [Brucella melitensis bv. 1 str. 16M] gi|23464516|gb|AAN34297.1| flagellar hook-associated protein FlgL, putative [Brucella suis 1330] gi|62198148|gb|AAX76447.1| hypothetical flagellar hook-associated protein FlgL [Brucella abortus bv. 1 str. 9-941] gi|82940206|emb|CAJ13262.1| flagellar hook-associated protein FlgL, putative KO: K02397 flagellar hook-associated protein 3 FlgL [Brucella melitensis biovar Abortus 2308] gi|161337991|gb|ABX64295.1| flagellar hook-associated 3 family protein [Brucella canis ATCC 23365] gi|163676178|gb|ABY40288.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|189021780|gb|ACD74501.1| flagellar hook-associated protein [Brucella abortus S19] gi|225642988|gb|ACO02901.1| flagellar hook-associated 3 family protein [Brucella melitensis ATCC 23457] gi|255998556|gb|ACU50243.1| flagellar hook-associated protein [Brucella microti CCM 4915] gi|260097411|gb|EEW81285.1| flagellar hook-associated protein [Brucella abortus NCTC 8038] gi|260151744|gb|EEW86837.1| flagellar hook-associated protein [Brucella melitensis bv. 1 str. 16M] gi|260155381|gb|EEW90462.1| flagellar hook-associated protein [Brucella suis bv. 4 str. 40] gi|260669709|gb|EEX56649.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 4 str. 292] gi|260677352|gb|EEX64173.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 6 str. 870] gi|260872576|gb|EEX79645.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 9 str. C68] gi|260921664|gb|EEX88232.1| flagellar hook-associated protein FlgL [Brucella ceti M13/05/1] gi|261292135|gb|EEX95631.1| flagellar hook-associated protein FlgL [Brucella ceti M644/93/1] gi|261739453|gb|EEY27379.1| flagellar hook-associated protein FlgL [Brucella suis bv. 5 str. 513] gi|262764475|gb|EEZ10507.1| flagellar hook-associated protein FlgL [Brucella melitensis bv. 3 str. Ether] gi|262999968|gb|EEZ12658.1| flagellar hook-associated protein FlgL [Brucella melitensis bv. 1 str. Rev.1] gi|263091464|gb|EEZ16000.1| flagellar hook-associated protein [Brucella melitensis bv. 2 str. 63/9] gi|294818621|gb|EFG35621.1| flagellar hook-associated protein 3 FlgL [Brucella sp. NVSL 07-0026] gi|297174022|gb|EFH33386.1| flagellar hook-associated protein 3 FlgL [Brucella abortus bv. 5 str. B3196] gi|326411301|gb|ADZ68365.1| flagellar hook-associated protein FlgL [Brucella melitensis M28] gi|326554590|gb|ADZ89229.1| flagellar hook-associated protein FlgL [Brucella melitensis M5-90] Length = 348 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/364 (27%), Positives = 170/364 (46%), Gaps = 24/364 (6%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN-AGMLRD 119 ++ N LV +R++ +Q + + Q+ +G L G ++ + A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA----GANNSGETAKTVAKSARS 116 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEENSKS 176 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q GF ++ Sbjct: 117 MLDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFGFAMDDP-- 173 Query: 177 LLAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSNASDHNIKYRIKDTEGID 233 +V++++ +M F LE F++ D WA NWS+ASD IK RI TE D Sbjct: 174 -------QVANISGDEMKAF---LEGDFAEQFNDANWAANWSDASDTRIKSRISPTETAD 223 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI 293 S + N G R + AV+ TEF L A + LT + L Q ++ ++ LG+ Sbjct: 224 TSISANADGFRKTVMSAVMVTEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGL 283 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ + + I++ + V+ + A +++ L +IE SY +T +LQ +S+ Sbjct: 284 AQSRTEAATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSL 343 Query: 354 LNYL 357 LNYL Sbjct: 344 LNYL 347 >gi|148558140|ref|YP_001258002.1| flagellar hook-associated protein FlgL [Brucella ovis ATCC 25840] gi|237817500|ref|ZP_04596491.1| flagellar hook-associated protein FlgL [Brucella abortus str. 2308 A] gi|148369425|gb|ABQ62297.1| putative flagellar hook-associated protein FlgL [Brucella ovis ATCC 25840] gi|237787335|gb|EEP61552.1| flagellar hook-associated protein FlgL [Brucella abortus str. 2308 A] Length = 351 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/364 (27%), Positives = 170/364 (46%), Gaps = 24/364 (6%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 4 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 63 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN-AGMLRD 119 ++ N LV +R++ +Q + + Q+ +G L G ++ + A R Sbjct: 64 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA----GANNSGETAKTVAKSARS 119 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEENSKS 176 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q GF ++ Sbjct: 120 MLDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFGFAMDDP-- 176 Query: 177 LLAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSNASDHNIKYRIKDTEGID 233 +V++++ +M F LE F++ D WA NWS+ASD IK RI TE D Sbjct: 177 -------QVANISGDEMKAF---LEGDFAEQFNDANWAANWSDASDTRIKSRISPTETAD 226 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI 293 S + N G R + AV+ TEF L A + LT + L Q ++ ++ LG+ Sbjct: 227 TSISANADGFRKTVMSAVMVTEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGL 286 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ + + I++ + V+ + A +++ L +IE SY +T +LQ +S+ Sbjct: 287 AQSRTEAATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSL 346 Query: 354 LNYL 357 LNYL Sbjct: 347 LNYL 350 >gi|254702381|ref|ZP_05164209.1| flagellar hook-associated protein FlgL [Brucella suis bv. 3 str. 686] gi|261752944|ref|ZP_05996653.1| flagellar hook-associated protein FlgL [Brucella suis bv. 3 str. 686] gi|261742697|gb|EEY30623.1| flagellar hook-associated protein FlgL [Brucella suis bv. 3 str. 686] Length = 348 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/364 (27%), Positives = 170/364 (46%), Gaps = 24/364 (6%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN-AGMLRD 119 ++ N LV +R++ +Q + + Q+ +G L G ++ + A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA----GANNSGETTKTVAKSARS 116 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEENSKS 176 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q GF ++ Sbjct: 117 MLDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFGFAMDDP-- 173 Query: 177 LLAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSNASDHNIKYRIKDTEGID 233 +V++++ +M F LE F++ D WA NWS+ASD IK RI TE D Sbjct: 174 -------QVANISGDEMKAF---LEGDFAEQFNDANWAANWSDASDTRIKSRISPTETAD 223 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI 293 S + N G R + AV+ TEF L A + LT + L Q ++ ++ LG+ Sbjct: 224 TSISANADGFRKTVMSAVMVTEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGL 283 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ + + I++ + V+ + A +++ L +IE SY +T +LQ +S+ Sbjct: 284 AQSRTEAATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSL 343 Query: 354 LNYL 357 LNYL Sbjct: 344 LNYL 347 >gi|254706498|ref|ZP_05168326.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis M163/99/10] gi|254711217|ref|ZP_05173028.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis B2/94] gi|256030154|ref|ZP_05443768.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis M292/94/1] gi|256158333|ref|ZP_05456237.1| flagellar hook-associated protein FlgL [Brucella ceti M490/95/1] gi|256252733|ref|ZP_05458269.1| flagellar hook-associated protein FlgL [Brucella ceti B1/94] gi|260166794|ref|ZP_05753605.1| flagellar hook-associated protein FlgL [Brucella sp. F5/99] gi|261219811|ref|ZP_05934092.1| flagellar hook-associated protein FlgL [Brucella ceti B1/94] gi|261313952|ref|ZP_05953149.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis M163/99/10] gi|261318808|ref|ZP_05958005.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis B2/94] gi|261756171|ref|ZP_05999880.1| flagellar hook-associated protein [Brucella sp. F5/99] gi|265987185|ref|ZP_06099742.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis M292/94/1] gi|265996848|ref|ZP_06109405.1| flagellar hook-associated protein FlgL [Brucella ceti M490/95/1] gi|260918395|gb|EEX85048.1| flagellar hook-associated protein FlgL [Brucella ceti B1/94] gi|261298031|gb|EEY01528.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis B2/94] gi|261302978|gb|EEY06475.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis M163/99/10] gi|261736155|gb|EEY24151.1| flagellar hook-associated protein [Brucella sp. F5/99] gi|262551145|gb|EEZ07306.1| flagellar hook-associated protein FlgL [Brucella ceti M490/95/1] gi|264659382|gb|EEZ29643.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis M292/94/1] Length = 348 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/364 (27%), Positives = 170/364 (46%), Gaps = 24/364 (6%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN-AGMLRD 119 ++ N LV +R++ +Q + + Q+ +G L G ++ + A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA----GANNSGETAKTVAKSARS 116 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEENSKS 176 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q GF ++ Sbjct: 117 MLDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFGFAMDDP-- 173 Query: 177 LLAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSNASDHNIKYRIKDTEGID 233 +V++++ +M F LE F++ D WA NWS+ASD IK RI TE D Sbjct: 174 -------QVANISGDEMKAF---LEGDFAEQFNDANWAANWSDASDTRIKSRISPTETAD 223 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI 293 S + N G R + AV+ TEF L A + LT + L Q ++ ++ LG+ Sbjct: 224 TSISANADGFRKKVMSAVMVTEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGL 283 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ + + I++ + V+ + A +++ L +IE SY +T +LQ +S+ Sbjct: 284 AQSRTEAATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSL 343 Query: 354 LNYL 357 LNYL Sbjct: 344 LNYL 347 >gi|225628427|ref|ZP_03786461.1| flagellar hook-associated protein FlgL [Brucella ceti str. Cudo] gi|225616273|gb|EEH13321.1| flagellar hook-associated protein FlgL [Brucella ceti str. Cudo] Length = 351 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/364 (27%), Positives = 170/364 (46%), Gaps = 24/364 (6%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 4 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 63 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN-AGMLRD 119 ++ N LV +R++ +Q + + Q+ +G L G ++ + A R Sbjct: 64 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA----GANNSGETAKTVAKSARS 119 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEENSKS 176 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q GF ++ Sbjct: 120 MLDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFGFAMDDP-- 176 Query: 177 LLAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSNASDHNIKYRIKDTEGID 233 +V++++ +M F LE F++ D WA NWS+ASD IK RI TE D Sbjct: 177 -------QVANISGDEMKAF---LEGDFAEQFNDANWAANWSDASDTRIKSRISPTETAD 226 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI 293 S + N G R + AV+ TEF L A + LT + L Q ++ ++ LG+ Sbjct: 227 TSISANADGFRKKVMSAVMVTEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGL 286 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ + + I++ + V+ + A +++ L +IE SY +T +LQ +S+ Sbjct: 287 AQSRTEAATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSL 346 Query: 354 LNYL 357 LNYL Sbjct: 347 LNYL 350 >gi|306841278|ref|ZP_07473989.1| flagellar hook-associated protein FlgL [Brucella sp. BO2] gi|306288680|gb|EFM60011.1| flagellar hook-associated protein FlgL [Brucella sp. BO2] Length = 348 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/362 (26%), Positives = 171/362 (47%), Gaps = 20/362 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN-AGMLRD 119 ++ N LV +R++ +Q + + Q+ +G L G ++ + A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA----GANNSGETAKTVAKSARS 116 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEENSKS 176 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q GF ++ Sbjct: 117 MLDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFGFAMDDP-- 173 Query: 177 LLAGQHLEVSSMNAQQMTDFIK-QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVS 235 +V++++ +M F++ ++F +D WA NWS+ASD IK RI TE D S Sbjct: 174 -------QVANISGDEMKAFMEGDFAEQF-NDANWAANWSDASDTRIKSRISPTETADTS 225 Query: 236 ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISE 295 + N G R + AV+ EF L A + LT ++L Q ++ ++ LG+++ Sbjct: 226 ISANADGFRKTVMSAVMVAEFADIGLNASAFDALTTQVLQITTQAVTETTSEQTTLGLAQ 285 Query: 296 KNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + + I++ + V+ + A +++ L +IE SY +T +LQ +S+LN Sbjct: 286 SRTEAATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSLLN 345 Query: 356 YL 357 YL Sbjct: 346 YL 347 >gi|306845417|ref|ZP_07477991.1| flagellar hook-associated protein FlgL [Brucella sp. BO1] gi|306274160|gb|EFM55976.1| flagellar hook-associated protein FlgL [Brucella sp. BO1] Length = 348 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/364 (27%), Positives = 169/364 (46%), Gaps = 24/364 (6%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN-AGMLRD 119 ++ N LV +R++ +Q + + Q+ +G L G ++ + A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA----GANNSGETAKTVAKSARS 116 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEENSKS 176 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q GF ++ Sbjct: 117 ILDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFGFAMDDP-- 173 Query: 177 LLAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSNASDHNIKYRIKDTEGID 233 +V++++ +M F LE F++ D WA NWS+ASD IK RI TE D Sbjct: 174 -------QVANISGDEMKAF---LEGDFAEQFNDANWAANWSDASDTRIKSRISPTETAD 223 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI 293 S + N G R + AV+ EF L A + LT + L Q ++ ++ LG+ Sbjct: 224 TSISANADGFRKTVMSAVMVAEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGL 283 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ + + I++ + V+ + A +++ L +IE SY +T +LQ +S+ Sbjct: 284 AQSRTEAATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSL 343 Query: 354 LNYL 357 LNYL Sbjct: 344 LNYL 347 >gi|328545489|ref|YP_004305598.1| flagellar hook-associated protein L [polymorphum gilvum SL003B-26A1] gi|326415230|gb|ADZ72293.1| Flagellar hook-associated protein L [Polymorphum gilvum SL003B-26A1] Length = 349 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 89/361 (24%), Positives = 169/361 (46%), Gaps = 16/361 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKTT IST ++ + L + + + +L EM TG+ +D GL LG+R + E Sbjct: 1 MKTTYISTFTLSDTSRGLLMKQSANLARLQVEMSTGRKADIGLDLGSRTGEAIALRSEHT 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +N+L RL +QA L + Q + LV + + + + G + Sbjct: 61 RLNAIIDTNALAASRLDVTQAALGDVLGTAQSFLATLVGV---RDSDGSASVAKGEGQGG 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYF-TKDSLAKKSFDQMLQ---GFLEENSKS 176 + ++ N G YLF+G+N+ P+ YF T + K + D GF +++ Sbjct: 118 LDLLISRLNTQVNGNYLFAGLNTDVAPMANYFETPAASNKAAVDAAFVARFGFSQDDPA- 176 Query: 177 LLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSA 236 VS+++A M DF+ DD W +WS+AS+ + RI +E + +S Sbjct: 177 --------VSTISAADMDDFLTNFYMPLFDDPAWGADWSSASNDAVSSRISASETLGISV 228 Query: 237 NVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEK 296 + N R + V + + + L + A + K + + + + G+ + + +GI+++ Sbjct: 229 SANETAFRTLAAVFTMLADLGTGQLGEAAYGAVVDKAIGLLGEAIGGVTDLMSRMGIAQE 288 Query: 297 NINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 ++ L + I++ I+ V +L+T I ++E +Y ++ ++Q+LSILNY Sbjct: 289 RVSNASDRLAIQAGILNQRINVLENVNPEETAVRLNTAITQLETTYAVSARIQRLSILNY 348 Query: 357 L 357 L Sbjct: 349 L 349 >gi|254720775|ref|ZP_05182586.1| flagellar hook-associated protein FlgL [Brucella sp. 83/13] gi|265985833|ref|ZP_06098568.1| flagellar hook-associated protein FlgL [Brucella sp. 83/13] gi|306840134|ref|ZP_07472919.1| flagellar hook-associated protein FlgL [Brucella sp. NF 2653] gi|264664425|gb|EEZ34686.1| flagellar hook-associated protein FlgL [Brucella sp. 83/13] gi|306404779|gb|EFM61073.1| flagellar hook-associated protein FlgL [Brucella sp. NF 2653] Length = 348 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 97/362 (26%), Positives = 170/362 (46%), Gaps = 20/362 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN-AGMLRD 119 ++ N LV +R++ +Q + + Q+ +G L G ++ + A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA----GANNSGETAKTVAKSARS 116 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEENSKS 176 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q GF ++ Sbjct: 117 MLDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFGFAMDDP-- 173 Query: 177 LLAGQHLEVSSMNAQQMTDFIK-QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVS 235 +V++++ +M F++ ++F +D WA NWS+ASD IK RI TE D S Sbjct: 174 -------QVANISGDEMKAFMEGDFAEQF-NDANWAANWSDASDTRIKSRISPTETADTS 225 Query: 236 ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISE 295 + N G R + AV+ EF L A + LT + L Q ++ ++ LG+++ Sbjct: 226 ISANADGFRKTVMSAVMVAEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGLAQ 285 Query: 296 KNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + + I++ + V+ + A +++ L +IE SY +T +LQ +S+LN Sbjct: 286 SRTEAATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSLLN 345 Query: 356 YL 357 YL Sbjct: 346 YL 347 >gi|153011506|ref|YP_001372720.1| flagellar hook-associated protein FlgL [Ochrobactrum anthropi ATCC 49188] gi|151563394|gb|ABS16891.1| flagellar hook-associated 3 family protein [Ochrobactrum anthropi ATCC 49188] Length = 348 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 99/367 (26%), Positives = 172/367 (46%), Gaps = 30/367 (8%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + +K +E TG D GL LG++ + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMLKAQQEATTGTVFDVGLSLGSKSGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q ++ + Q+ +G L T N +A + S Sbjct: 61 RLSVLTDMNKLVQQRMNATQTAAGTIIENTQNFLGDL-------TGANNTAESASTIAKS 113 Query: 121 YESFVT----FANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEEN 173 +S + N + G+Y+F+G+N+ KP+ Y T+ S A+ + Q Q GF ++ Sbjct: 114 AKSILNSVTGLLNTSYNGEYIFAGVNTDVKPVADY-TEGSAAQTAVRQAFQTHFGFAIDD 172 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSNASDHNIKYRIKDTE 230 +V+++ +M F LE F+D D WA NWS+ASD IK RI TE Sbjct: 173 P---------QVANITGDEMKAF---LEGDFADEFNDANWAANWSDASDTVIKSRISPTE 220 Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 D S + N G R + AV+ EF + L + A LT + + T ++ ++ Sbjct: 221 TADTSISANADGFRKTIMSAVMVAEFATIGLNNSAFEALTHQAMQTTTTAITETTSEQTT 280 Query: 291 LGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 LG+++ + + I++ + V+ + A +++ L +IE SY +T +LQ Sbjct: 281 LGLAQSRTEAATTRIAAQQKILNQSVLNLEEVDPYEAATRVNALKTQIETSYSLTVQLQN 340 Query: 351 LSILNYL 357 +S+LNYL Sbjct: 341 MSLLNYL 347 >gi|239834425|ref|ZP_04682753.1| flagellar hook-associated protein FlgL [Ochrobactrum intermedium LMG 3301] gi|239822488|gb|EEQ94057.1| flagellar hook-associated protein FlgL [Ochrobactrum intermedium LMG 3301] Length = 351 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 97/365 (26%), Positives = 172/365 (47%), Gaps = 26/365 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + + + + +K +E TG D GL LG++ + +E + Sbjct: 4 MKAQSISTYGATSALRAMVAKNKAEMLKAQQEATTGTVFDVGLSLGSKSGQTVSLRKEYD 63 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q ++ + Q+ +G L T N +A + S Sbjct: 64 RLSVLTDMNKLVQQRMNATQTAAGTIIENTQNFLGDL-------TGANNTAESAATIAKS 116 Query: 121 YESFVT----FANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEEN 173 +S + N + G+Y+F+G+N+ KP+ Y T+ S A+ + Q Q GF ++ Sbjct: 117 AKSILNSVTGLLNTSYNGEYIFAGVNTDVKPVADY-TEGSAAQTAVRQAFQNHFGFAIDD 175 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIK-QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGI 232 +V+++ +MT F+ ++F +D WA NWS+ASD IK RI TE Sbjct: 176 P---------QVANITGDEMTAFLDGDFAEEF-NDANWAANWSDASDTVIKSRISPTETA 225 Query: 233 DVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLG 292 D S + N G R + AV+ EF + L A LT K + T ++ ++ LG Sbjct: 226 DTSISANADGFRRTIMSAVMVAEFATIGLNSQAFEALTGKAMQTTTTAITETTSEQTTLG 285 Query: 293 ISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLS 352 +++ + + I++ + V+ + A +++ L +IE SY +T +LQ +S Sbjct: 286 LAQSRTQAATTRIVAQQKILNQSVLNLEEVDPYEAATRVNALKTQIETSYSLTVQLQNMS 345 Query: 353 ILNYL 357 +LNYL Sbjct: 346 LLNYL 350 >gi|323136999|ref|ZP_08072079.1| flagellar hook-associated protein FlgL [Methylocystis sp. ATCC 49242] gi|322397760|gb|EFY00282.1| flagellar hook-associated protein FlgL [Methylocystis sp. ATCC 49242] Length = 348 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 89/355 (25%), Positives = 160/355 (45%), Gaps = 16/355 (4%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST SI + EL +D + +E+ TG+ +D GL LG R + L Sbjct: 6 STYSITTSLRRTLVELQRDLDRSQKELATGRHADLGLALGMRAGLSYSLGDTYDTAQSIL 65 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 +N LV+ RL T+Q ++++ Q M L+ L+ D A R S +F++ Sbjct: 66 ATNDLVSTRLDTTQTAIANLLSNAQAMRATLMSSLDDGGDVGAIETQA---RVSLSNFIS 122 Query: 127 FANMTDEGQYLFSGINSSEKPLNGYFT-KDSLAKKSFDQMLQ---GFLEENSKSLLAGQH 182 N D +LF+G+NS P+N YF S K + D GF + + + Sbjct: 123 TLNSGDGDSFLFAGVNSEVAPINNYFADPPSPNKVALDAAFIANFGFAQTDPR------- 175 Query: 183 LEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG 242 V+ + QM F+ E W +WSNASD ++ +I + ID S N Sbjct: 176 --VADITGDQMEAFLSGPMTALFAPEAWKTDWSNASDQPLRSQISMSVTIDTSVTANAPA 233 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 ++ + + T+ + + A L K + +S +++ +A +G+ ++N+ Sbjct: 234 LQKLAMAYTMMTDLGASGMNSAAYKALLKSATEVIDDSISALLKTQAQVGVMQRNVVNAN 293 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++N I+ ++ V+ A A+++ L+ +IE +Y +T K+ +LS+ YL Sbjct: 294 QTMTIQSNAIEMNLNSLETVDLTEAAARVNGLMTQIETAYTLTAKITQLSLAKYL 348 >gi|114706626|ref|ZP_01439527.1| flagellar hook-associated protein L [Fulvimarina pelagi HTCC2506] gi|114538018|gb|EAU41141.1| flagellar hook-associated protein L [Fulvimarina pelagi HTCC2506] Length = 350 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 160/334 (47%), Gaps = 13/334 (3%) Query: 27 VKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSM 86 V +E+ TG+ +D G LG V + E +++ + +N+ + +R T QA L S Sbjct: 27 VIAQKEVSTGRYADVGKSLGTSVARTISMRAELSNLEKLTTANTAIGQRFETMQAALGS- 85 Query: 87 QKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEK 146 + + L L+ G + F IN + V + + +Y+FSG + Sbjct: 86 --VAETGESLLSSLISGSGTSVGFDINQRSATANIGQLVGALSGSFGSRYIFSGAKTDTP 143 Query: 147 PLNGYFTKD---SLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDK 203 P+ D S A S D Q ++ N+ + + + A QM F+ + Sbjct: 144 PIKADLAADYGTSAAFASVDAAWQAYVTANAGG-------DPAQITAAQMESFLANEFEA 196 Query: 204 FSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTD 263 DD WA NWS+ASD+ RI + + + SA+ N + R+IM V+ + F ++L D Sbjct: 197 VFDDANWAANWSDASDNQTVSRIGENDMMRSSASANDQSFRNIMKSYVMLSNFSGESLAD 256 Query: 264 GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE 323 R VL + T+ +GLS + + R+ +G+ E+ I L+ + I+ I + ++ Sbjct: 257 ETRQVLASSSIETLSKGLSQLTDLRSDIGLGEERIERANEGLKVQTAILKIGIGEEEEID 316 Query: 324 QHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + A ++ +L+N +EMSY +T ++ +LS+LN+L Sbjct: 317 IYEAKTRIDSLMNTLEMSYALTARVSRLSLLNFL 350 >gi|121602544|ref|YP_989381.1| flagellar hook-associated protein FlgL [Bartonella bacilliformis KC583] gi|120614721|gb|ABM45322.1| putative flagellar hook-associated protein 3 (HAP3) [Bartonella bacilliformis KC583] Length = 360 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 90/338 (26%), Positives = 162/338 (47%), Gaps = 22/338 (6%) Query: 32 EMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQ 91 E+VTGQ D GL LG + +++ + + N + ++N L R+S++QA + S+ Sbjct: 32 ELVTGQLYDPGLTLGRKTGRLVDIQNQMNFLEGFSNTNKLALSRMSSAQAAIQSLIAAGD 91 Query: 92 DMVGPLVI-----LLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEK 146 D P + +L G N + ++ SF++ N + G Y+F G N+++ Sbjct: 92 DETAPGALTLFNNMLVGDAANQTPSAAQAVAENALASFISALNTSYNGDYIFGGTNTTQP 151 Query: 147 PLNGY-FTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFS 205 PLN Y +S K FL+ G++ E + A+ M FI ++ Sbjct: 152 PLNAYKVGGESGPSKVVHDAFTTFLD--------GRNPE--DLTAEDMDKFIDEVFSTLF 201 Query: 206 DDEYWANNWSNASDHNIKYRI-KDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDG 264 D+E ++ +SNA D +I+ RI + E ++V+A+ N +G RD M ++ EF L+ Sbjct: 202 DEENFSKIFSNAKDGSIEKRIGPNGETVNVAASANEKGFRDAMKNMILVAEFGDIGLSKE 261 Query: 265 ARNVLTKKMLSTVQQ-----GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKS 319 A+ L K ++ Q ++ II + LG +E I ++ + N++ Sbjct: 262 AQEALFAKARNSSDQTSTTTAINEIIATASRLGSTEARIKGATKQIEIQTNLLKGQQIDM 321 Query: 320 IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 IGV+ A +L L + +SY +T ++ +LS++NYL Sbjct: 322 IGVDSTEAGQRLKALEAMLNLSYTLTARISQLSLVNYL 359 >gi|116248738|ref|YP_764579.1| flagellar hook-associated protein FlgL [Rhizobium leguminosarum bv. viciae 3841] gi|115253388|emb|CAK11776.1| putative flagellar hook associated protein [Rhizobium leguminosarum bv. viciae 3841] Length = 348 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 88/363 (24%), Positives = 168/363 (46%), Gaps = 21/363 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHE---EMVTGQSSDYGLQLGARVTSILEWEQ 57 MK + +S+S++ N+L +++ KL + E TG +D G+ LGA + Sbjct: 1 MKASFVSSSAM---QNVLRLTISQSQNKLQQASTEATTGTYADSGVSLGAGAAKSINLTS 57 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 A SN++V R++ SQ LSS++ +V L L + D + Sbjct: 58 AIAQAASFKMSNAVVELRMNASQTALSSLKDAGDSLVSNLTAL-QASQDTTSIAVALQTA 116 Query: 118 RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSL 177 + V+ AN + G++LF G N +PL+ + S + L + Sbjct: 117 SATISQLVSTANTSVNGEFLFGGTNLDSQPLSD---QSSAVSDTIVSALNDYAT------ 167 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN---NWSNASDHNIKYRIKDTEGIDV 234 G +VS + +++ FI + + W + WS AS N+ RI +E I Sbjct: 168 --GLGKDVSELTGEEIGSFITDTVEPMFSESAWTDASEGWSAASSTNMTSRISGSETITS 225 Query: 235 SANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGIS 294 S N N G+R + +V+ + ++L+ A++ + K ++ Q SGI+ Q++ LG++ Sbjct: 226 STNANSEGMRYLALASVVVSALFGQDLSSDAQSTVASKAIAYAAQATSGIVTQQSELGLA 285 Query: 295 EKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSIL 354 ++ + + L ++ ++ + GV+ + A ++ L ++E +Y + +KLQ LS++ Sbjct: 286 QERLEKANDALDAQSTLLQGNLVDLQGVDTYEASTLVNQLQTQLETAYTLVSKLQSLSLV 345 Query: 355 NYL 357 NYL Sbjct: 346 NYL 348 >gi|327192296|gb|EGE59261.1| flagellar hook-associated protein FlgL [Rhizobium etli CNPAF512] Length = 348 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 84/363 (23%), Positives = 167/363 (46%), Gaps = 21/363 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHE---EMVTGQSSDYGLQLGARVTSILEWEQ 57 MK + +S+S++ N+L +++ KL + E TG +D G+ LGA + Sbjct: 1 MKASFVSSSAM---QNVLRLTISQSQTKLQQASTEATTGTYADIGVSLGADAAKSINLTG 57 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 + A N++V R+ SQ LSS++ +V L L + D + Sbjct: 58 AIDQAASFKAGNAVVALRMEASQTALSSLKDAGDSLVSNLTAL-QASQDTTSIAVALQTA 116 Query: 118 RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSL 177 + ++ AN + G++LF G N +PL + + + L G+ Sbjct: 117 SATISQLISTANTSVNGEFLFGGTNLDNQPLTD---QSATVSDTIVTALTGYAT------ 167 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN---NWSNASDHNIKYRIKDTEGIDV 234 G +V+ + +++ FI + + W + WS AS ++ RI +E I Sbjct: 168 --GLGKDVNELTGEEIGSFITDTVEPLFSESAWTDASTGWSTASSTDMTSRISGSETITS 225 Query: 235 SANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGIS 294 S N N G+R + +V+ + ++L+D A++ + K + Q SGI+ +++ LG+S Sbjct: 226 STNANSDGMRYLALASVVVSALFGQDLSDDAKSTVASKAIGYAAQATSGIVTEQSQLGLS 285 Query: 295 EKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSIL 354 ++ + + L +++++ + G + + A ++ L ++E +Y + +KLQ LS++ Sbjct: 286 QERLEKADDALDAQSSLLQGKLVDLQGADTYEASTLVNQLQTQLETAYTLVSKLQSLSLV 345 Query: 355 NYL 357 NYL Sbjct: 346 NYL 348 >gi|256059806|ref|ZP_05450001.1| flagellar hook-associated protein FlgL [Brucella neotomae 5K33] gi|261323786|ref|ZP_05962983.1| flagellar hook-associated protein FlgL [Brucella neotomae 5K33] gi|261299766|gb|EEY03263.1| flagellar hook-associated protein FlgL [Brucella neotomae 5K33] Length = 334 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 95/364 (26%), Positives = 166/364 (45%), Gaps = 38/364 (10%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN-AGMLRD 119 ++ N LV +R++ +Q + + Q+ +G L G ++ + A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA----GANNSGETAKTVAKSARS 116 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEENSKS 176 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q GF ++ Sbjct: 117 MLDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFGFAMDDP-- 173 Query: 177 LLAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSNASDHNIKYRIKDTEGID 233 +V++++ +M F LE F++ D WA NWS+ASD +I Sbjct: 174 -------QVANISGDEMKAF---LEGDFAEQFNDANWAANWSDASDTSI----------- 212 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI 293 SAN + G R + AV+ TEF L A + LT + L Q ++ ++ LG+ Sbjct: 213 -SANAD--GFRKTVMSAVMVTEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGL 269 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ + + I++ + V+ + A +++ L +IE SY +T +LQ +S+ Sbjct: 270 AQSRTEAATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSL 329 Query: 354 LNYL 357 LNYL Sbjct: 330 LNYL 333 >gi|90422626|ref|YP_530996.1| flagellar hook-associated protein FlgL [Rhodopseudomonas palustris BisB18] gi|90104640|gb|ABD86677.1| putative flagellar hook-associated protein [Rhodopseudomonas palustris BisB18] Length = 347 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 91/357 (25%), Positives = 161/357 (45%), Gaps = 10/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M TT IST+SI + I + + +E TG+++D GL LGA + E Sbjct: 1 MATTFISTNSISTTLRISAMKSQAALSRATKEATTGRNADVGLSLGALAGRDVVLRAELL 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ + + +N LV RL T+Q + + + L L + I A + Sbjct: 61 NVDKLVDTNGLVGGRLDTAQQRVDELIDTAKSFQKDL---LAARNSAGGGTIIAQSASAN 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + ++ N+T +GQYLF GIN++ +P+ Y S +K + D S L Sbjct: 118 LQGLISTLNVTMDGQYLFGGINTATRPILDY-AAGSASKTAVDAAFSATFGFAQNSPL-- 174 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 VS + A M F+ DD W NWS A+D ++ RI T+ ID SA+ N Sbjct: 175 ----VSGITAADMQSFLDTTFQAQFDDPAWGTNWSTATDQVMRSRISTTQTIDSSASANE 230 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 R + + ++ + L A + + + + ++ + A +G +++ Sbjct: 231 PAFRKLAKAYTMLSDLGTSGLNQSAFQTVIDAAIEDIGEAINDLAGVGAKIGTAQEQTTG 290 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L+ + ++I I+ V+ A +++ L +++EMS +T ++Q+LSILNYL Sbjct: 291 ATERLKVQGDLITQQINAMEQVDPTEASVRVTNLKSQLEMSLALTARIQQLSILNYL 347 >gi|158422273|ref|YP_001523565.1| flagellar hook-associated protein FlgL [Azorhizobium caulinodans ORS 571] gi|158329162|dbj|BAF86647.1| putative flagellar hook-associated protein [Azorhizobium caulinodans ORS 571] Length = 352 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 91/338 (26%), Positives = 158/338 (46%), Gaps = 23/338 (6%) Query: 28 KLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQ 87 K + E+ TG+ +D GL+LG + + ++ E N + L SNSL ++ SQ L+ Sbjct: 28 KKNTELATGRYADIGLELGVKTSLSVDLRHEYNQVQGLLDSNSLTDSIMTRSQTGLT--- 84 Query: 88 KIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKP 147 I+ + LL + + S ++ N TD +Y+F GINS + P Sbjct: 85 NILNNASTYQKTLLSSQASAETVTQMQLEGQQGLASLLSSLNTTDGTRYVFGGINSGQTP 144 Query: 148 LNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQL--EDKFS 205 + + T +A ++ Q GF + + +++ + QM F+ + ED + Sbjct: 145 MKDFATNAQVAIQTAFQTAFGFPVSDP---------QAANITSGQMQTFLNNVFSEDNTN 195 Query: 206 -----DDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI-MFVAVIGTEFLS- 258 +D WA WSNAS N+ +I TE + VS N +R + M +++G +L Sbjct: 196 TSALFNDTNWAAQWSNASSTNLTRQISQTENVSVSTTANDTAMRKLAMAYSMMG--YLGV 253 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 +L A + +T+ G++G+ A +G+S+ + L +++ + I+ Sbjct: 254 GSLNMSALQTVMDTSRATLSAGMTGVTNTAAAIGVSQTRVTTANSELNKTLDVVKSRINS 313 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 V+ A QL TL N++ MSY TTKL +LSI+NY Sbjct: 314 LESVDPAEAKTQLDTLTNQLSMSYSTTTKLLQLSIMNY 351 >gi|182680455|ref|YP_001834601.1| flagellar hook-associated protein FlgL [Beijerinckia indica subsp. indica ATCC 9039] gi|182636338|gb|ACB97112.1| flagellar hook-associated 3 family protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 348 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 85/337 (25%), Positives = 156/337 (46%), Gaps = 23/337 (6%) Query: 28 KLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQ 87 K E+ TG+ +D GL LG+ + + Q++N + +N + + RL T+Q+ LSS+ Sbjct: 28 KTQIEISTGRYADVGLALGSGTAAGISLRQQENVLKTITTTNGIASTRLDTTQSVLSSIG 87 Query: 88 KIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS----YESFVTFANMTDEGQYLFSGINS 143 Q + L+ G T P +L+ S +S N T G YLF G+NS Sbjct: 88 ANAQSFLESLL----GATSATGDP---AVLQASAQVNLQSLTASLNTTLNGDYLFGGVNS 140 Query: 144 SEKPLNGYFTKDSLAKKSFDQMLQ---GFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQL 200 ++P+ Y T S + DQ Q G + +S VSS+ A M +F+ Sbjct: 141 GQQPITDYSTPGSSNGNALDQAFQTTFGISQSDSA---------VSSITASNMQNFLDSS 191 Query: 201 EDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKN 260 W+ NWS ASD + +I D + + S + N + +++ + + + N Sbjct: 192 FANLFQGSNWSTNWSQASDTVLTTQINDHQTANTSVSANEKAFKELFSAYTMIGQLGTAN 251 Query: 261 LTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 L A + + ++TV+ +S + + +G+ + I + + N + + ++ Sbjct: 252 LNSSAFKTVVNQAVTTVKSAISDLTNIQGGVGLVQNQIVNANDTMSLRMNYLTSQVNTLE 311 Query: 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V+ A +++ L +IE +Y +T++L KLS++NYL Sbjct: 312 SVDPAEASTRMTALQTQIETAYSLTSQLHKLSLVNYL 348 >gi|115523195|ref|YP_780106.1| flagellar hook-associated protein FlgL [Rhodopseudomonas palustris BisA53] gi|115517142|gb|ABJ05126.1| flagellar hook-associated 3 family protein [Rhodopseudomonas palustris BisA53] Length = 347 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 91/358 (25%), Positives = 164/358 (45%), Gaps = 12/358 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M TT IS+++I + + + +E TG+ +D GL LGA + E Sbjct: 1 MATTFISSNAITTTLRNAAMKSQVAVSRATKEATTGRLADVGLSLGALAGRDVVLRAELL 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + +N LV+ RL T+Q + + + + L+ N +AG + Sbjct: 61 DVDKLVDTNGLVSGRLDTAQQRVGELIETAEAFQKDLLAARNSANGGNVIAQSAGA---N 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S + N+ GQYLF G N+ KP+ Y S +K + D + + S Sbjct: 118 LQSLIATLNVAMNGQYLFGGTNTGVKPMVEY-AAGSTSKTAIDTTFASYFGFSQASP--- 173 Query: 181 QHLEVSSMNAQQMTDFIK-QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 VS + A M F+ L+ +F+D W NWS A D ++ RI T+ ID S + N Sbjct: 174 ---SVSGITAANMQTFLTTDLQTEFAD-PAWGTNWSTALDQPMRSRISTTQTIDSSVSAN 229 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 G R + + + + +L A V+ ++ V + ++ + A LG +++ Sbjct: 230 EPGFRKLAKAYTMLNDLGTGSLNQTAFQVVIDTAITAVGEAINDLAGVGARLGTAQQQTT 289 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + L+ + ++I I+ V+ A +++TL N++EMS +T ++Q++SIL YL Sbjct: 290 DAISRLKVQGDLITEQITAMEKVDPTEASVRVTTLNNQLEMSLALTARIQQMSILKYL 347 >gi|241113582|ref|YP_002973417.1| flagellar hook-associated 3 family protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861790|gb|ACS59456.1| flagellar hook-associated 3 family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 348 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 86/363 (23%), Positives = 168/363 (46%), Gaps = 21/363 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHE---EMVTGQSSDYGLQLGARVTSILEWEQ 57 MK + +S+S++ N+L +++ KL + E TG +D G+ LG + Sbjct: 1 MKASFVSSSAM---QNVLRLTISQSQNKLQQASTEATTGTYADIGVSLGNGAAKSINLTS 57 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 A SN++V R+ SQA LSS++ +V L L + D + Sbjct: 58 AIAQAASFKTSNAVVELRMDASQAALSSLKDAGDSLVSNLTAL-QASQDTTSIAVALQTA 116 Query: 118 RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSL 177 + V+ AN + G++LF G N +PL+ + S + L + Sbjct: 117 GATISQLVSTANTSVNGEFLFGGTNLDSQPLSD---QSSAVSDAIVSALNDYAT------ 167 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYW---ANNWSNASDHNIKYRIKDTEGIDV 234 G +V+ + +++ FI + + W ++ WS AS ++ RI +E I Sbjct: 168 --GLGKDVNELTGEEIGSFITDTVEPMFSESAWTDTSDGWSTASSTDMTSRISGSETITS 225 Query: 235 SANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGIS 294 S N N G+R + +V+ + ++L+ A++ + K ++ Q SGI+ Q++ LG++ Sbjct: 226 STNANSEGMRYLALASVVVSALFGQDLSSDAQSTVASKAIAYAAQATSGIVTQQSELGLA 285 Query: 295 EKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSIL 354 ++ + + L ++ ++ + GV+ + A ++ L ++E +Y + +KLQ LS++ Sbjct: 286 QERLEKANDALDAQSTLLQGNLVDLQGVDTYEASTLVNQLQTQLETAYTLVSKLQSLSLV 345 Query: 355 NYL 357 NYL Sbjct: 346 NYL 348 >gi|118589964|ref|ZP_01547368.1| flagellar hook-associated protein L [Stappia aggregata IAM 12614] gi|118437461|gb|EAV44098.1| flagellar hook-associated protein L [Stappia aggregata IAM 12614] Length = 348 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 94/362 (25%), Positives = 170/362 (46%), Gaps = 19/362 (5%) Query: 1 MKTTGISTSSIFE--RMNILTKELNKDSV--KLHEEMVTGQSSDYGLQLGARVTSILEWE 56 MKTT IST ++ + R I N+ S+ +L E+ +G+ D GL LG + + Sbjct: 1 MKTTYISTITLADASRRQIQ----NQASLVQRLSIEVSSGRKYDVGLDLGTKTGESVSLR 56 Query: 57 QEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA-G 115 E + + +N+L RL SQA + + K QD + LV L E + +A G Sbjct: 57 SEFHFLNGITDTNALTASRLDVSQAAMGDVLKDAQDFLSTLVALRENSGTADIVKADAVG 116 Query: 116 MLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSK 175 L E + N G ++F+GIN+ ++P Y + K + D FL E Sbjct: 117 NL----ELLTSRLNTQLNGNFVFAGINTDQEPFVDYSDPGAPNKLAADA---AFLTEFG- 168 Query: 176 SLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVS 235 +A + VS + M+ ++ D D W +WS+A+D + RI +E + S Sbjct: 169 --IAQTNPGVSGITPAAMSTYLNGAFDLMFQDPAWGTSWSSATDSVMVSRISASETVSSS 226 Query: 236 ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISE 295 + N + RD+ + ++ +++L V+ K + + G++ I Q LG + Sbjct: 227 VSANEQAFRDLAAAYTMMSDLGNEDLDPETLKVVVNKAIEKLGTGIAEITSQMGQLGNVQ 286 Query: 296 KNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + + L+ + +I++ I+ V+ +L+T + ++E +Y +T+++Q+LSILN Sbjct: 287 EQVKLASERLKVQTDILNRRINDLENVDPEETAVRLNTALTQLETTYAVTSRMQRLSILN 346 Query: 356 YL 357 YL Sbjct: 347 YL 348 >gi|254505260|ref|ZP_05117411.1| Putative flagellar hook-associated protein 3 [Labrenzia alexandrii DFL-11] gi|222441331|gb|EEE48010.1| Putative flagellar hook-associated protein 3 [Labrenzia alexandrii DFL-11] Length = 339 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 89/351 (25%), Positives = 156/351 (44%), Gaps = 25/351 (7%) Query: 14 RMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVT 73 R NIL++ + KL E+ +G+ D GL LGAR + E N + +N+L Sbjct: 7 RRNILSQSTLVN--KLGVELSSGRKFDIGLDLGARTGESVSVRSEFNFLNGIKDTNALAE 64 Query: 74 KRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES----FVTFAN 129 RL+ SQA + M Q + LV L E P A +++ E V+ N Sbjct: 65 SRLAVSQAAMDDMLTDAQAFMATLVALKED-------PTTADIVKADAEGNMGLLVSRLN 117 Query: 130 MTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEENSKSLLAGQHLEVS 186 G ++F GINS+ P Y S K + D GF + N V Sbjct: 118 SQQNGYFIFGGINSANIPFADYSDPTSPNKVAADAAYLAEFGFDQSNPG---------VP 168 Query: 187 SMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI 246 + A MT ++ D W +WS ASD + RI +E + SA+ N R++ Sbjct: 169 GITAAAMTTYLSGNFDAMFQSPNWEASWSTASDTPLSSRISASETVATSASANETAFREL 228 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 + ++ ++ L+D A V+ + T+ ++ + +G ++ + L Sbjct: 229 AKAYTMMSDLGNEALSDEAYKVVVDTAIQTLGSAMNNLTSVMGKMGTVQEQVKLAGERLD 288 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + NI++T I+ V++ +L+T + ++E +Y +T+++Q LS+LN++ Sbjct: 289 VQTNILNTRINDLELVDKEETSVRLTTALTQLETTYAVTSRMQGLSLLNFI 339 >gi|218528729|ref|YP_002419545.1| flagellar hook-associated protein FlgL [Methylobacterium chloromethanicum CM4] gi|218521032|gb|ACK81617.1| flagellar hook-associated 3 family protein [Methylobacterium chloromethanicum CM4] Length = 350 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 85/360 (23%), Positives = 155/360 (43%), Gaps = 14/360 (3%) Query: 1 MKTTG-ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEK 59 M TTG IS+ +++ L + E+ TG+ +D G LG V ++ Sbjct: 1 MMTTGFISSLNLWNAPRTGVSRLQSELANATREIATGRFADVGATLGGGVAGAFGLRRQS 60 Query: 60 NHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN-KFPINAGMLR 118 +A SN+ T RL+ +Q L+ ++ + + L L TD K +++ R Sbjct: 61 AVLASLTQSNAAATSRLAATQGALTEIRSSAETTLNELTAL---PTDQRAKTLVDSA--R 115 Query: 119 DSYESFVTFANMTDEGQYLFSGINSSEKPLNGY-FTKDSLAKKSFDQMLQGFLEENSKSL 177 + N + GQ++F G NS PL Y + S AK + D++ F Sbjct: 116 GRLAALAGTLNTSTNGQFVFGGTNSGAAPLASYEGSPTSAAKTAVDKLFTDFFG------ 169 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSAN 237 A S++ Q+ FI + W+ WS AS + +I TE + S + Sbjct: 170 FAPGSTAASTITPNQLQGFIDGPLAGLFTEVNWSRTWSGASSRTLDSQISLTETVTTSVS 229 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 N R + VI + L+ A+NV T K++ + Q + +A LG ++ Sbjct: 230 ANAEPFRKLGMAYVIASGLGLSGLSQEAQNVATGKVMDILGQVSGSLTTMQADLGRAQSQ 289 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I E + + +++ I V+ A +++ + +++MSY +T +L+ LS++N++ Sbjct: 290 ITEANARMAKQTALLNGQIRDLENVDPAEAKSRVDAITTQMQMSYGLTAQLRSLSLINFI 349 >gi|254559270|ref|YP_003066365.1| FlgL protein [Methylobacterium extorquens DM4] gi|254266548|emb|CAX22312.1| FlgL protein [Methylobacterium extorquens DM4] Length = 350 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 83/359 (23%), Positives = 153/359 (42%), Gaps = 12/359 (3%) Query: 1 MKTTGISTS-SIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEK 59 M TTG S+S +++ L + +E+ TG+ +D G LG V ++ Sbjct: 1 MMTTGFSSSLNLWNAPRTGVSRLQSELANATKEIATGRFADVGATLGGGVAGAFSLRRQS 60 Query: 60 NHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 +A SN+ T RL+ +Q L+ ++ + L L D + A R Sbjct: 61 AVLASLTQSNAAATSRLAATQGALTEIRSSADTTLNELTAL---PADQRAKTLVASA-RG 116 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGY-FTKDSLAKKSFDQMLQGFLEENSKSLL 178 + N + G+++F+G NS PL Y + S AK + D++ + F Sbjct: 117 RLAALAGTLNTSTNGRFVFAGTNSGAAPLTSYEGSPTSAAKTAVDKLFKDFFG------F 170 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 A S++ Q+ FI + W+ WS AS + +I TE + S + Sbjct: 171 APGSAAASTITPNQLEGFIDGPLAGLFTEVNWSRTWSGASSRTLDSQISLTETVTTSVSA 230 Query: 239 NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 N R + VI + L+ A+NV T K++ + Q + +A LG ++ I Sbjct: 231 NAEPFRKLGMAYVIASGLGLSGLSQEAQNVATGKVMDILGQVSGSLTTMQADLGRAQSQI 290 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 E + + ++ I V+ A +++ + +++MSY +T +L+ LS++N++ Sbjct: 291 TEANARMSKQTALLTGQIRDLENVDPAEAKSRVDAITTQMQMSYGLTAQLRSLSLINFI 349 >gi|217976242|ref|YP_002360389.1| flagellar hook-associated protein FlgL [Methylocella silvestris BL2] gi|217501618|gb|ACK49027.1| flagellar hook-associated 3 family protein [Methylocella silvestris BL2] Length = 347 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 82/353 (23%), Positives = 154/353 (43%), Gaps = 11/353 (3%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST SI + ++ + E TG +D GL L ++ + + + + Sbjct: 5 ISTQSISSSLRQSVLKMQAELSSAQTEAATGNHADIGLSLASKTGQSVSLQAQAAMLQTL 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 +NS+ R++ Q L +Q Q ++ L L + N I A D+ + + Sbjct: 65 SETNSIALTRMNMIQNQLGDLQSGAQSLLNSL--LSTNGSAQNAATIEASG-ADNLKGLI 121 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ-GFLEENSKSLLAGQHLE 184 N T G YLF+GIN++ PL Y+ + +K + D F + S +AG Sbjct: 122 ASLNSTLNGDYLFAGINTATAPLTDYYATGASSKTAVDAAFSTAFGMSQTSSSVAG---- 177 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 ++A M DF+ W N+WS+ASD I I + S + N R Sbjct: 178 ---ISASAMQDFLDGPFAALFQGSNWTNDWSSASDEAIASSISPGGAVISSVSANQSAFR 234 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 D+ + ++ + + +VL K + G+S + + +A LG+++ ++++ Sbjct: 235 DLAEAYTMLSDLGGEKYSQATYDVLVGKARDLLTDGISALSDAQAGLGVAQSSVSDANTQ 294 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + NI+ + I + + ++S L +I+ +Y +T+ LQ LS++ YL Sbjct: 295 MSLQMNILSSQIGNLESINGYEVQVRISDLQTQIQTAYSLTSHLQDLSLVKYL 347 >gi|163850125|ref|YP_001638168.1| flagellar hook-associated protein FlgL [Methylobacterium extorquens PA1] gi|163661730|gb|ABY29097.1| flagellar hook-associated 3 family protein [Methylobacterium extorquens PA1] Length = 350 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 83/359 (23%), Positives = 153/359 (42%), Gaps = 12/359 (3%) Query: 1 MKTTG-ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEK 59 M TTG IS+ +++ L + +E+ TG+ +D G LG V ++ Sbjct: 1 MMTTGFISSLNLWNAPRTGVSRLQSELANATKEIATGRFADVGATLGGGVAGAFGLRRQS 60 Query: 60 NHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 +A SN+ T RL+ +Q L+ ++ + L L + K +++ R Sbjct: 61 AVLASLTQSNAAATSRLAATQGALTEIRSSADTTLNELTALPADQ--RAKTLVDSA--RG 116 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGY-FTKDSLAKKSFDQMLQGFLEENSKSLL 178 + N + GQ++F G NS PL Y + S AK + D++ F Sbjct: 117 RLAALAGTLNTSTNGQFVFGGTNSGAAPLTSYEGSPTSAAKTAVDKLFTDFFG------F 170 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 A S++ Q+ FI + W+ WS AS + +I TE + S + Sbjct: 171 APGSAAASTITPNQLQGFIDGPLAGLFTEVNWSRTWSGASSRTLDSQISLTETVTTSVSA 230 Query: 239 NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 N R + VI + L+ A+NV T K++ + Q + +A LG ++ I Sbjct: 231 NAEPFRKLGMAYVIASGLGLSGLSQEAQNVATGKVMDILGQVSGSLTTMQADLGRAQSQI 290 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 E + + ++ I V+ A +++ + +++MSY +T +L+ LS++N++ Sbjct: 291 TEANARMSKQTALLTGQIRDLENVDPAEAKSRVDAITTQMQMSYGLTAQLRSLSLINFI 349 >gi|12330682|gb|AAG52879.1| FlgL [Brucella abortus] Length = 309 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 82/288 (28%), Positives = 130/288 (45%), Gaps = 22/288 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q ++ KI+++ L L A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQ---TAAGKIIENTQNFLGDLAGANNSGETAKTVAKSARSM 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEENSKSL 177 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q GF ++ Sbjct: 118 LDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFGFAMDDP--- 173 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSNASDHNIKYRIKDTEGIDV 234 +V++++ +M F LE F++ D WA NWS+ASD IK RI TE D Sbjct: 174 ------QVANISGDEMKAF---LEGDFAEQFNDANWAANWSDASDTRIKSRISPTETADT 224 Query: 235 SANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLS 282 S + N G R + AV+ TEF L A + LT + L Q ++ Sbjct: 225 SISANADGFRKTVMSAVMVTEFADIGLNASAFDALTTQALQITTQAVT 272 >gi|90418363|ref|ZP_01226275.1| putative flagellar hook-associated protein [Aurantimonas manganoxydans SI85-9A1] gi|90338035|gb|EAS51686.1| putative flagellar hook-associated protein [Aurantimonas manganoxydans SI85-9A1] Length = 352 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 89/345 (25%), Positives = 159/345 (46%), Gaps = 39/345 (11%) Query: 30 HEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKI 89 +E+ TG+ +D GL LG+R + E+ +N+L+ +R T Q L S+ K Sbjct: 30 QKEVTTGRFADVGLTLGSRTNQTVSLRVERESAIRIQEANTLIGQRFDTMQTALESIAKT 89 Query: 90 VQDMVGPLVILLEGKTDNNKFPINAGM------LRDSYESFVTFANMTDEGQYLFSGINS 143 ++++ L+ + P +AG+ + + F+ N ++LFSG + Sbjct: 90 GENLLASLI---------SNGPADAGISASVQQAKAGLQQFMGAINAASGSRFLFSGAAT 140 Query: 144 SEKPLNGYFTK-----------DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQ 192 + L FTK +S AKK+ + L ++ L A L+ + Sbjct: 141 DQPAL--AFTKVGGGVASSYEDNSTAKKAVNDALTAAAPASAADLEA--FLDGA------ 190 Query: 193 MTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVI 252 D K + SD W + WS A + RI D+E +DVS + R+I+ V+ Sbjct: 191 FNDLFKVPQP--SDGTGW-DMWSKADSSPVVNRISDSETLDVSYPASDEAFRNIVKAYVM 247 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 ++ +K + + R +LT + + T+ GLS + E RA +G + + L + N++ Sbjct: 248 ISDLGAKTMDESQRQLLTSRAVETLSLGLSQLTEIRAEIGGKQSRLEITNETLGTRKNVL 307 Query: 313 DTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 IS V+ + A +++TL N +E SY +T ++ +LSI+NYL Sbjct: 308 TMSISSFEDVDAYEASTRVTTLTNLLEASYALTARISRLSIMNYL 352 >gi|240137259|ref|YP_002961728.1| FlgL protein [Methylobacterium extorquens AM1] gi|240007225|gb|ACS38451.1| FlgL protein [Methylobacterium extorquens AM1] Length = 350 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 83/359 (23%), Positives = 152/359 (42%), Gaps = 12/359 (3%) Query: 1 MKTTG-ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEK 59 M TTG IS+ +++ L + E+ TG+ +D G LG V ++ Sbjct: 1 MMTTGFISSLNLWNSPRTGVSRLQSELANATREIATGRFADVGATLGGDVAGAFSLRRQS 60 Query: 60 NHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 +A SN+ T RL+ +Q L+ ++ + L L + K +++ R Sbjct: 61 AVLASLTQSNAAATSRLAATQGALTEIRSSADTTLNELTALPADQ--RAKTLVDSA--RG 116 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGY-FTKDSLAKKSFDQMLQGFLEENSKSLL 178 + N + GQ++F+G NS PL Y + S AK + D++ F Sbjct: 117 RLAALAGTLNTSTNGQFVFAGTNSGAAPLTSYEGSPTSAAKTAVDKLFTDFFG------F 170 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 A S++ Q+ FI + W WS AS + +I TE + S + Sbjct: 171 APGSAAASTITPNQLEGFIDGPLAGLFTEVNWNRTWSGASSRTLDSQISLTETVTTSVSA 230 Query: 239 NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 N R + VI + L+ A+NV T K++ + Q + +A LG ++ I Sbjct: 231 NAEPFRKLGMAYVIASGLGLSGLSQEAQNVATGKVMDILGQVSGSLTTMQADLGRAQSQI 290 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 E + + ++ I V+ A +++ + +++MSY +T +L+ LS++N++ Sbjct: 291 TEANARMSKQTALLTGQIRDLENVDPAEAKSRVDAITTQMQMSYGLTAQLRSLSLINFI 349 >gi|319409167|emb|CBI82811.1| putative flagellar hook-associated protein 3 (HAP3) [Bartonella schoenbuchensis R1] Length = 360 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 89/344 (25%), Positives = 164/344 (47%), Gaps = 34/344 (9%) Query: 32 EMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQ 91 E TG+ D GL LG R ++ E + +++ ++N L R+S+ QA + S+ Sbjct: 32 EATTGKLYDPGLTLGRRTGRLVNIESQMSYLEGFSNTNKLTMLRMSSMQAAIHSLVSSGD 91 Query: 92 DMVGPLVI-----LLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEK 146 + P + +L G + + + +DS +F++ N G+Y+F G N+SE+ Sbjct: 92 EAAAPGALTLFNNMLVGDPGSAAPSVIQAVAQDSLSAFISALNTNYNGEYVFGGTNTSEQ 151 Query: 147 PLNGYFT-----KDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLE 201 PLN Y + + +FD+ L G E+ + +++M +FI Sbjct: 152 PLNFYTVGGETGPSKVVRDTFDEFLGGRKPED--------------LTSEEMEEFIDGPF 197 Query: 202 DKFSDDEYWANNWSNASDHNIKYRI-KDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKN 260 D+E + +SNA D +I+ RI + E ++V+A+ N +G RD M V+ EF Sbjct: 198 SSLFDEENFTQIFSNAQDGSIEKRILSNGETVNVAASANEKGFRDAMKSMVLVAEFGDIG 257 Query: 261 LTDGARNVLTKKMLSTVQQGLSG-----IIEQRAVLGISEKNIN--EERVFLQNKNNIID 313 L+ A+ L K ++ Q + II + +G +E + +R+ +Q K+ ++ Sbjct: 258 LSKDAQEGLYSKARTSNDQTSTSSSTSEIIAIASRIGSAEARVKTATQRIEIQ-KDLLMK 316 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I IGV+ A ++ L + +SY +T ++ +LS++NYL Sbjct: 317 AKIDL-IGVDSTEAVQKVQALEAMLNLSYTLTGRISQLSLVNYL 359 >gi|27381967|ref|NP_773496.1| flagellar hook-associated protein FlgL [Bradyrhizobium japonicum USDA 110] gi|27355137|dbj|BAC52121.1| flgL [Bradyrhizobium japonicum USDA 110] Length = 352 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 83/334 (24%), Positives = 147/334 (44%), Gaps = 14/334 (4%) Query: 28 KLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQ 87 K +E TG+ +D GL+LGA L + + + + +N LV+ RL +Q ++ + Sbjct: 29 KASKEATTGRFADVGLELGATTGGDLTLRADWSFADQLVDTNELVSGRLDVTQTRITQLG 88 Query: 88 KIVQDMVGPLVILLEGKTDNNK---FPINAGMLRDSYESFVTFANMTDEGQYLFSGINSS 144 + L+ TDN P + L+D + N++ G YLFSGIN+ Sbjct: 89 TTATSFLKDLIA--ARSTDNGGRIVLPPASANLQD----LIGALNVSYNGSYLFSGINTQ 142 Query: 145 EKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH-LEVSSMNAQQMTDFIKQLEDK 203 P+ Y T S +Q+ F Q VSS+ QM F+ D Sbjct: 143 NMPITAYAT----GSASKNQVDADFAAAPPTGFGFPQSSASVSSITPAQMQTFLNTTFDA 198 Query: 204 FSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTD 263 W NWS+A+D ++ RI TE D S + N G R + + + + L+ Sbjct: 199 EFASPAWNTNWSSATDQVMQSRISTTEVADTSVSANQTGFRKLAEAYTMMADLGNAKLSQ 258 Query: 264 GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE 323 V+ K + + ++ + +G ++ I L+ + +I++ I V+ Sbjct: 259 ETFQVVVDKAIGLIGGAITDLATLGGGVGTVQQRITSATNKLKTQQDILNNQIVGMEKVD 318 Query: 324 QHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 A +++TL +I+ + +T++LQK+S++NYL Sbjct: 319 PTEASVRVNTLQTQIQTALALTSQLQKISLINYL 352 >gi|209547528|ref|YP_002279446.1| flagellar hook-associated protein FlgL [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538772|gb|ACI58706.1| flagellar hook-associated 3 family protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 348 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 86/363 (23%), Positives = 166/363 (45%), Gaps = 21/363 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHE---EMVTGQSSDYGLQLGARVTSILEWEQ 57 MK + +S+S++ N+L +++ KL + E TG +D G+ LGA + Sbjct: 1 MKASFVSSSAM---QNVLRLTISQSQTKLQQASTEATTGTYADIGVSLGAGTAKTISLTS 57 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 + A SN++V R+ SQ LSS++ +V L L + D + Sbjct: 58 AIDQAASFQTSNAVVELRMDASQTALSSLKDAGDSLVSNLTAL-QASQDTTSIAVALQTA 116 Query: 118 RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSL 177 + ++ AN + G++LF G N +PL + S + L + Sbjct: 117 GSTISQLISTANTSVNGEFLFGGTNLDSQPLTD---QSSTVSDTIVTALGDYAT------ 167 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN---NWSNASDHNIKYRIKDTEGIDV 234 G +V+ + ++ FI + + W + WS AS ++ RI +E I Sbjct: 168 --GLGKDVNELTGDEIGTFITGTVEPMFSESGWTDASAGWSTASSTDMTSRISSSETITS 225 Query: 235 SANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGIS 294 S N N G+R + +V+ + ++L+ A++ + K + Q SGI+ Q++ LG+S Sbjct: 226 STNANSEGMRYLALASVVVSALFGQDLSSDAQSTVATKAIGYAAQATSGIVTQQSQLGLS 285 Query: 295 EKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSIL 354 ++ + + L +++++ + GV+ + A ++ L ++E +Y + +KLQ LS++ Sbjct: 286 QERLEKANDALDAQSSLLQGKLVDLQGVDAYEASTLVNQLQTQLETAYTLVSKLQGLSLV 345 Query: 355 NYL 357 NYL Sbjct: 346 NYL 348 >gi|218662014|ref|ZP_03517944.1| flagellar hook-associated protein FlgL [Rhizobium etli IE4771] Length = 371 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 82/350 (23%), Positives = 160/350 (45%), Gaps = 21/350 (6%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHE---EMVTGQSSDYGLQLGARVTSILEWEQ 57 MK + +S+S++ N+L +++ KL + E TG +D G+ LGA + Sbjct: 36 MKASFVSSSAM---QNVLRLTISQSQTKLQQASTEATTGTYADIGVSLGAGAAKSINLTS 92 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 + A SNS+V R+ SQ LSS++ +V L L + D + Sbjct: 93 AIDQAASFKTSNSVVALRMEASQTALSSLKDAGDSLVSNLTAL-QASQDTTSIAVALQTA 151 Query: 118 RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSL 177 + ++ AN + G++LF G N +PL D A S D ++ + Sbjct: 152 SATISQLISTANTSVNGEFLFGGTNLDNQPLT-----DQSATVS-DTIVTALTD-----Y 200 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYW---ANNWSNASDHNIKYRIKDTEGIDV 234 G +V+ + +++ FI + + W ++ WS AS ++ RI +E I Sbjct: 201 ATGLGKDVNELTGEEIGSFITDTVEPMFSESAWTDASSGWSTASSTDMTSRISGSETITS 260 Query: 235 SANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGIS 294 S N N G+R + +V+ + ++L+D A++ + K + Q SGI+ Q++ LG+S Sbjct: 261 STNANSDGMRYLALASVVVSALFGQDLSDDAKSTVASKAIGYAAQATSGIVTQQSQLGLS 320 Query: 295 EKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMI 344 ++ + + L +++++ + GV+ + A ++ L ++E +Y + Sbjct: 321 QERLEKADDALDAQSSLLQGKLVDLQGVDTYEASTLVNQLQTQLETAYTL 370 >gi|296445194|ref|ZP_06887154.1| flagellar hook-associated 3 family protein [Methylosinus trichosporium OB3b] gi|296257368|gb|EFH04435.1| flagellar hook-associated 3 family protein [Methylosinus trichosporium OB3b] Length = 349 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 86/335 (25%), Positives = 151/335 (45%), Gaps = 17/335 (5%) Query: 28 KLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQ 87 K E+ TG+ +D GL LG + ++ +SN+++ RLST+ L ++ Sbjct: 27 KAQVEVSTGRVADLGLALGGGTAQDVSLGVRSADLSSITNSNAVIAARLSTTDTSLETIA 86 Query: 88 KIVQDMVGPLVILLEGK-TDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEK 146 Q+ + LV G +D NA +S + + + G YLF G+++S Sbjct: 87 TTAQNFLETLVGAQSGAGSDAQAIQDNA---VSGLKSLIGALDTSIGGVYLFGGVSTSTS 143 Query: 147 PLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSD 206 P+ YF+ A K D + Q F+ S + V S+ QM + LE FSD Sbjct: 144 PIADYFSDPPSASK--DALDQAFV---SAFGVTQSDDAVGSITQSQMQSY---LEGGFSD 195 Query: 207 ---DEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFV-AVIGTEFLSKNLT 262 W +WS+ASD RI ++ D S + N R I A++ ++K + Sbjct: 196 LFSASGWTTSWSSASDRATSNRISLSQIADTSVSANDSAFRGIAAAYAMVADSGVTKLGS 255 Query: 263 DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGV 322 D VL + +T+ + + RA +G+ + N++ L + N + + I V Sbjct: 256 DAYNEVL-RTATTTLSSAIGDLTRLRASVGVMQTNVSNANDSLTAQQNALASQIGALENV 314 Query: 323 EQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + A +L+ L ++E SY +T K+Q+L++ Y+ Sbjct: 315 DPYEASTRLNNLTTQLETSYTLTGKIQQLTLTKYI 349 >gi|319405423|emb|CBI79042.1| putative flagellar hook-associated protein 3 (HAP3) [Bartonella sp. AR 15-3] Length = 360 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 95/372 (25%), Positives = 177/372 (47%), Gaps = 28/372 (7%) Query: 1 MKTTGISTSSIF-ERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEK 59 M+ + IST + R NI++ E D +K EM TGQ D GL+LG + +++ E + Sbjct: 1 MRVSSISTYVLNNARRNIIS-EGQSDLMKAGYEMATGQVYDPGLELGRKTGRLMDIENQM 59 Query: 60 NHIAERLHSNSLVTKRLSTSQAHLSSM--QKIVQDMVGPLVI---LLEGKTDNNKFPINA 114 +++ SN L++ RLS+ Q + S+ + G L I +L G N + Sbjct: 60 SYLEGYSTSNKLLSLRLSSVQVAIQSLIASGDKEATPGALTIFNNMLVGDAGNATPSVAQ 119 Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENS 174 + ++S +F++ N G+Y+F GIN+SE PL Y K + ++E Sbjct: 120 SVAQNSLGAFISALNTNFNGEYVFGGINTSEPPLKFY-------KVGGETGPSKIVQETF 172 Query: 175 KSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSNASDHNIKYRI-KDTE 230 ++ L G+ LE + +++M +FI + FSD +E + +SNA +I+ I + + Sbjct: 173 ENFLNGRKLE--DLTSEEMEEFI---DGPFSDLFNEENFKEFFSNAQGGSIEKHIAPNGD 227 Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKML-----STVQQGLSGII 285 +D + + N +G RD M ++ EF L+ A+ L + ++ + II Sbjct: 228 KVDAAVSANEQGFRDAMKNLILVAEFGDIGLSKEAQESLFSRARVSADDTSTSSAVDKII 287 Query: 286 EQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMIT 345 + +G +E + ++ + ++ IGV+ ++ L +E SY +T Sbjct: 288 ATASKVGSTEARVKAATQQIETQVGLLKGAKINMIGVDAAEVAQKVKALEAMLEASYTLT 347 Query: 346 TKLQKLSILNYL 357 +++LS++NYL Sbjct: 348 DMIRRLSLINYL 359 >gi|254698188|ref|ZP_05160016.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 2 str. 86/8/59] gi|260762635|ref|ZP_05874967.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 2 str. 86/8/59] gi|260673056|gb|EEX59877.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 2 str. 86/8/59] Length = 246 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 24/263 (9%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN-AGMLRD 119 ++ N LV +R++ +Q + + Q+ +G L G ++ + A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA----GANNSGETAKTVAKSARS 116 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ---GFLEENSKS 176 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q GF ++ Sbjct: 117 MLDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFGFAMDDP-- 173 Query: 177 LLAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSNASDHNIKYRIKDTEGID 233 +V++++ +M F LE F++ D WA NWS+ASD IK RI TE D Sbjct: 174 -------QVANISGDEMKAF---LEGDFAEQFNDANWAANWSDASDTRIKSRISPTETAD 223 Query: 234 VSANVNMRGIRDIMFVAVIGTEF 256 S + N G R + AV+ TEF Sbjct: 224 TSISANADGFRKTVMSAVMVTEF 246 >gi|86360904|ref|YP_472791.1| flagellar hook-associated protein FlgL [Rhizobium etli CFN 42] gi|86285006|gb|ABC94064.1| flagellar hook-associated protein [Rhizobium etli CFN 42] Length = 348 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 84/363 (23%), Positives = 163/363 (44%), Gaps = 21/363 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHE---EMVTGQSSDYGLQLGARVTSILEWEQ 57 MK + +S+S++ N+L +++ KL + E TG +D G+ LG+ + Sbjct: 1 MKASFVSSSAM---QNVLRLTISQSQNKLQQASTEATTGTYADIGVSLGSGAAKSINLTS 57 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 A SNS+V R+ SQ LSS++ +V L L + D + Sbjct: 58 AIAQAASFKTSNSVVALRMEASQTALSSLKDAGDSLVSNLTAL-QASQDTTSIAVALQSA 116 Query: 118 RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSL 177 + ++ AN + G++LF G N +PL + S + L + Sbjct: 117 NATISQLISTANTSVNGEFLFGGTNLDSQPLTD---QSSAVSDTIVTALNDYAT------ 167 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDH---NIKYRIKDTEGIDV 234 G +VS + +++ FI + + W + S S ++ R+ +E I Sbjct: 168 --GLGKDVSELTGEEIGSFITDTVEPMFSESSWTDASSGWSSASSTDMTSRVSASETITS 225 Query: 235 SANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGIS 294 S N N G+R + A + + ++L+ A++ + K + Q SGI+ Q++ LG+S Sbjct: 226 STNANSEGMRYLALAATVVSALFGQDLSSDAQSTVASKAIGYAAQATSGIVTQQSELGLS 285 Query: 295 EKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSIL 354 ++ + + L +++++ + GV+ + A ++ L ++E +Y + +KLQ LS++ Sbjct: 286 QERLEKANDALDAQSSLLQGNLVDLQGVDTYEASTLVNQLQTQLETAYTLVSKLQNLSLV 345 Query: 355 NYL 357 NYL Sbjct: 346 NYL 348 >gi|319403980|emb|CBI77568.1| putative flagellar hook-associated protein 3 (HAP3) [Bartonella rochalimae ATCC BAA-1498] Length = 360 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 91/371 (24%), Positives = 174/371 (46%), Gaps = 26/371 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ IST + L E D +K EM TGQ D GL LG + +++ E + + Sbjct: 1 MRVPSISTYVLNNARRNLISEGKSDLMKAGYEMATGQVYDPGLTLGRKTGRLMDIENQMS 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSM--QKIVQDMVGPLVI---LLEGKTDNNKFPINAG 115 ++ SN L++ RLS+ QA + S+ + G LV+ +L G N Sbjct: 61 YLEGYSTSNKLLSLRLSSVQAAIQSLIASGDKESTPGSLVVFNNMLVGDAGNAAPSAAQA 120 Query: 116 MLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSK 175 + +++ +F++ N G+Y+F G N+SE PL Y K + + E + Sbjct: 121 VAQNALSAFISALNTNFNGEYIFGGTNTSEPPLKFY-------KVCGETGPSKIVHEAFE 173 Query: 176 SLLAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSNASDHNIKYRI-KDTEG 231 + L G+ E + +++M +FI + FSD +E + +SNA D + + I + + Sbjct: 174 NFLNGRKPE--DLTSEEMEEFI---DGPFSDLFNEENFKEFFSNAKDGSTEKHIAPNGDK 228 Query: 232 IDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGAR-NVLTKKMLSTVQQGLSGIIEQ--- 287 +DV+ + N +G RD M ++ EF L+ A+ ++ ++ +S S ++++ Sbjct: 229 VDVAVSANDKGFRDAMKNLILVAEFGDIGLSKEAQESLFSRARVSADNTSTSSVVDEITA 288 Query: 288 -RAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITT 346 + +G +E + ++ + ++ IGV+ ++ L +E SY +T Sbjct: 289 TASRVGSTETRVKAATHQIETQVGLLKGAQIDMIGVDAAEVAQKVKALEAMLEASYTLTD 348 Query: 347 KLQKLSILNYL 357 +++LS++NYL Sbjct: 349 MIRRLSLINYL 359 >gi|319406996|emb|CBI80633.1| putative flagellar hook-associated protein 3 (HAP3) [Bartonella sp. 1-1C] Length = 360 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 90/371 (24%), Positives = 174/371 (46%), Gaps = 26/371 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ IST + + E D +K EM TGQ D GL LG + +++ E + + Sbjct: 1 MRVPSISTYVLNNAQRNIISEGKFDLMKAGYEMATGQVYDPGLTLGRKTGRLMDIENQMS 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSM--QKIVQDMVGPLVI---LLEGKTDNNKFPINAG 115 ++ SN L++ RLS+ QA + S+ + G LV+ +L G N Sbjct: 61 YLEGYSTSNKLLSLRLSSVQAAIQSLIASGDKESTPGALVVFNNMLVGDAGNATPSATQA 120 Query: 116 MLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSK 175 + +++ +F++ N G+Y+F G N+SE PL Y K + + E + Sbjct: 121 VAQNALSAFISALNTNFNGEYIFGGTNTSEPPLKFY-------KVGGETGPSKIVHEAFE 173 Query: 176 SLLAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSNASDHNIKYRI-KDTEG 231 S L G+ E + +++M +FI + FSD +E + +SNA D + + I + + Sbjct: 174 SFLNGRKPE--DLTSEEMEEFI---DGPFSDLFNEENFKEFFSNAKDGSTEKHIAPNGDK 228 Query: 232 IDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGAR-NVLTKKMLSTVQQGLSGIIEQ--- 287 +DV+ + + +G RD M ++ EF L+ A+ ++ ++ +S S ++++ Sbjct: 229 VDVAVSASDKGFRDAMKNLILVAEFGDVGLSKEAQESLFSRARVSADNTSTSSVVDEIIA 288 Query: 288 -RAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITT 346 + +G +E + ++ + ++ IGV+ ++ L +E SY +T Sbjct: 289 TASRVGSAETRVKAATHQIETQVGLLKGAQIDMIGVDAADVAQKVKALEAMLEASYTLTD 348 Query: 347 KLQKLSILNYL 357 +++LS++NYL Sbjct: 349 MIRRLSLVNYL 359 >gi|170748123|ref|YP_001754383.1| flagellar hook-associated protein FlgL [Methylobacterium radiotolerans JCM 2831] gi|170654645|gb|ACB23700.1| flagellar hook-associated 3 family protein [Methylobacterium radiotolerans JCM 2831] Length = 351 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 93/376 (24%), Positives = 168/376 (44%), Gaps = 44/376 (11%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVT-GQSSDYGLQLGARVTSILEWEQEK 59 MKT+ IST++++ + L + K + EM G+ +D GL+LG + L+ Q Sbjct: 1 MKTSYISTATLWNSPRSHSARLQAEIAKANVEMDNDGRFADVGLELGHKTGLDLDLRQAV 60 Query: 60 NHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 + + + N L T RL+ +Q ++ +I D L ++ GK + A Sbjct: 61 DDLKAQQSRNKLTTLRLTATQ---EALNQIRADGESFLALVAPGKPFASSGAELAQGAAA 117 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTK-DSLAKKSFDQMLQ---GFLEENSK 175 + N + GQ LF+GIN+ +P+ T AK +FD Q GFL S Sbjct: 118 RLSALTGHLNTSVAGQALFAGINTDHRPIADSQTGLPPAAKSAFDTAFQTAFGFLPGTSP 177 Query: 176 SLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVS 235 L ++ A QM F+ D W WS+AS+ NI+ + TE + S Sbjct: 178 DAL--------NITAAQMQAFLDGPAAALFADPQWGATWSSASNVNIRSELGGTETAETS 229 Query: 236 ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISE 295 N N++ +R + + +G++ +L ++ + KM + L+G+ A G+++ Sbjct: 230 VNANVQTVRQLAQLYTLGSQIGLSSLAPETQSAVFDKM-----RNLAGV----ATFGLTQ 280 Query: 296 KNINEERVFLQNKNNIIDTYISKSI--------------GVEQHTAHAQLSTLINKIEMS 341 I + +Q + IDT + I VE T + L T ++++S Sbjct: 281 --IQADLGTVQARMKGIDTQLDAKIKGLTLGYRSFEDVDPVELKTRQSNLQT---QLQIS 335 Query: 342 YMITTKLQKLSILNYL 357 Y +T +L+K+++++Y+ Sbjct: 336 YSLTNELRKMNLIDYV 351 >gi|319898658|ref|YP_004158751.1| flagellar hook-associated protein 3 (HAP3) [Bartonella clarridgeiae 73] gi|319402622|emb|CBI76167.1| putative flagellar hook-associated protein 3 (HAP3) [Bartonella clarridgeiae 73] Length = 360 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 93/374 (24%), Positives = 174/374 (46%), Gaps = 32/374 (8%) Query: 1 MKTTGISTSSIF-ERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEK 59 M+ + IST + R NI++ E D +K EM TGQ D GL LG + +++ E + Sbjct: 1 MRVSSISTYVLNNARRNIIS-EGQSDLMKAAYEMATGQVYDPGLALGRKTARLIDVENQM 59 Query: 60 NHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQD----MVGPLVI---LLEGKTDNNKFPI 112 +++ S+ L+T RLS+ Q + ++ I D G L I +L G N Sbjct: 60 SYLEGYSTSDKLLTLRLSSVQVAIQTL--IASDDKEAAPGALTIFNNMLVGDAGNATPSA 117 Query: 113 NAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEE 172 + +++ +F++ N G+Y+F G N+SE PL Y K + ++E Sbjct: 118 AQAVAQNALGAFISALNTNFNGEYIFGGTNTSEPPLKFY-------KVGGETGPSKIVQE 170 Query: 173 NSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSNASDHNIKYRI-KD 228 ++ L G+ LE + +++M +FI + FSD +E + +SNA D +I+ I + Sbjct: 171 TFENFLNGRKLE--DLTSEEMEEFI---DGPFSDLFNEENFKEFFSNAQDGSIEKHIAPN 225 Query: 229 TEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTV-----QQGLSG 283 + +D + + N +G R M ++ EF L+ A+ L + ++ + Sbjct: 226 GDKVDAAVSANDKGFRYAMKNLILVAEFGDIGLSKEAQESLFSRARASADNTSTSSAVDE 285 Query: 284 IIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYM 343 II + +G +E + ++ + ++ I V+ ++ L +E SY Sbjct: 286 IIATASRVGSTEARVKAATQQIEIQVGLLRRAQINMIAVDAAEVAQKVKALETMLEASYT 345 Query: 344 ITTKLQKLSILNYL 357 +T +++LS++NYL Sbjct: 346 LTDMIRRLSLINYL 359 >gi|312115278|ref|YP_004012874.1| flagellar hook-associated protein FlgL [Rhodomicrobium vannielii ATCC 17100] gi|311220407|gb|ADP71775.1| flagellar hook-associated protein FlgL [Rhodomicrobium vannielii ATCC 17100] Length = 344 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/331 (23%), Positives = 140/331 (42%), Gaps = 13/331 (3%) Query: 27 VKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSM 86 K+ E +G+ SD LG++ + + + +++NS+V ++ +A +S+ Sbjct: 25 AKVTAETSSGKISDPASALGSQYGLYRTLQAQSTSLTNTINANSIVLNKI---KASTTSL 81 Query: 87 QKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEK 146 I D LL K+ + + A + ES +T N + G Y+F G N++ Sbjct: 82 TAIYSDAETLSNALLSAKSTGDVSAL-ATQAKGMVESLITSLNTSTGGAYVFGGSNTTVT 140 Query: 147 PLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSD 206 PLN Y A S G + ++ + SS+ + M F+ D Sbjct: 141 PLNDYSDAAQAATASAFYAAFGMTQSDTSA---------SSITSSDMASFLSGDYATLFD 191 Query: 207 DEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGAR 266 D W+ NWSNAS RI + + S + N R + + ++ NL + Sbjct: 192 DTSWSGNWSNASSTRGTARISEGQTATTSVSANEEAFRQLAEAYTMISDLGLDNLNSTTQ 251 Query: 267 NVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHT 326 + L V ++GI + LG+S+ I L + ++D + S+ + Sbjct: 252 QTVIVAALEKVNSAMAGISGMQTTLGVSQSQITSTNARLTTEKALVDNWSSELGDSDPTE 311 Query: 327 AHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 A A+L+ L ++ SY +T ++ LS++NYL Sbjct: 312 ASAKLAQLETLLDTSYTLTNRIYSLSLVNYL 342 >gi|188579927|ref|YP_001923372.1| flagellar hook-associated protein FlgL [Methylobacterium populi BJ001] gi|179343425|gb|ACB78837.1| flagellar hook-associated 3 family protein [Methylobacterium populi BJ001] Length = 350 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 82/359 (22%), Positives = 149/359 (41%), Gaps = 12/359 (3%) Query: 1 MKTTG-ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEK 59 M TTG IS+ +++ L D +E+ TG+ +D G LG V ++ Sbjct: 1 MMTTGFISSLNLWNAPRTGAARLQTDLATATKEIATGRFADVGASLGGGVVESFGLRRQS 60 Query: 60 NHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 +A SN+ + RL +Q+ L +Q + + L L + + A R Sbjct: 61 AVLAALTQSNTAASFRLEATQSALKEIQSAAEATLNELTAL----PADQRAKTVAETARG 116 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGY-FTKDSLAKKSFDQMLQGFLEENSKSLL 178 + N + GQ++F G +S PL Y + S AK + D F Sbjct: 117 RLVALAGALNTSAGGQFVFGGTDSGTAPLTPYEGSPPSAAKAAVDDAFTDFFG------F 170 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 A +++ ++ F+ + W+ WS+AS I +I TE S + Sbjct: 171 APGSAAAAAITPTELKGFLDGPLAGLFTEVNWSRTWSSASSRTIDSQISLTETATTSTSA 230 Query: 239 NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 N R + VI + L+ A+ V T K++ + Q G+ RA LG ++ I Sbjct: 231 NAEPFRKLGMAYVIASGLGLSGLSPEAQEVATVKVMDLLGQVSGGLTTLRADLGRTQSQI 290 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + ++ I V+ A A++ + +++MSY +T +L+ LS++N++ Sbjct: 291 TDANARMAKQTTLLTGQIRDLESVDPAEAKARVDAITTQMQMSYGLTAQLRSLSLINFI 349 >gi|304392491|ref|ZP_07374431.1| putative flagellar hook-associated protein FlgL [Ahrensia sp. R2A130] gi|303295121|gb|EFL89481.1| putative flagellar hook-associated protein FlgL [Ahrensia sp. R2A130] Length = 347 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 76/341 (22%), Positives = 152/341 (44%), Gaps = 20/341 (5%) Query: 20 KELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTS 79 + L + K E T + ++ L+LG + L E E + R+ + L T RLS + Sbjct: 24 RRLQAEIEKSQTEAATNRMANPALELGQQNGLRLRLEGEVQVLESRVQAYDLATVRLSVT 83 Query: 80 QAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFS 139 Q+ L+++++ + L+ + G TD N A + + F + N + G +LF+ Sbjct: 84 QSALTAIKQQGEQFSQSLITAVGGVTDGNFI---AATAEATLQGFRSAMNTSAGGDHLFA 140 Query: 140 GINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK- 198 GI+S P+ S +F GF + S ++ + DF++ Sbjct: 141 GIDSGSAPIGDLSAIRSDIVATFTARF-GFPPGDPAS---------QNLAPDLVVDFLQN 190 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLS 258 L+ + + W + S ASD +K R + +D+S + N +R +M A++ E L+ Sbjct: 191 DLQPRLT-GTAWTSLVSGASDEAVKLRTGTGDTVDISISANESAMRGVMAAALMTAE-LA 248 Query: 259 KNLTDGARNVLTKKMLSTVQQGLS--GIIEQRAVLGISEKNINEERVFLQNKNNIIDTYI 316 L + L + + QGL+ +++ R +G++ I+ + ++T Sbjct: 249 PYLNADSVAALARTSTDILAQGLADTNVLQTR--IGLTTGQIDNATAADNARRAGLETVS 306 Query: 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + V+ A ++ + + ++E +Y +T +LQ LS+L +L Sbjct: 307 EDMVRVDPFEAASRFNAQVTQLETAYALTGRLQGLSLLRFL 347 >gi|84502374|ref|ZP_01000510.1| flagellar hook-associated protein [Oceanicola batsensis HTCC2597] gi|84389186|gb|EAQ01983.1| flagellar hook-associated protein [Oceanicola batsensis HTCC2597] Length = 360 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 74/343 (21%), Positives = 155/343 (45%), Gaps = 30/343 (8%) Query: 30 HEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKI 89 EE+ TG+ +D LG R + R+ SN+L+ RL L +++ Sbjct: 32 EEEVATGRHADPFSALGTRAVEAMNTRAVYERTEGRIESNTLLQNRLDLMATALGNVRDA 91 Query: 90 VQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLN 149 QD++ + I T + + + + +D+Y+S V+F N + G+ LF G++S +N Sbjct: 92 AQDVL-TMTISNTDPTSSRQLYLK-DLAQDAYDSIVSFMNASYNGKALFGGVDSDRTAMN 149 Query: 150 GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSD--- 206 + +D+ S ++ +++ G + + NA+ + +++ F+ Sbjct: 150 SWAERDAATGLSASDVM--------STIVGGGITDAADANAK-----LAEIDAVFNGTPA 196 Query: 207 DEYWAN-----NWSNASD--HNIKYRIKDT--EGIDVSANV--NMRGIRDIMF-VAVIGT 254 + W N + D N R+ + E +D+ V N RG RD+M +A++ Sbjct: 197 NPAWGYEATFFNGTPLEDGLGNANPRLAASIDENLDIGYGVQANDRGFRDMMRGLAMLAA 256 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 + DGA + + + G++G++ A G +K + + L K ++ Sbjct: 257 GDPATITDDGAYEAWVGEAAAALGAGVTGVLNAEARTGSMQKLVEDSNDRLHAKREVLTL 316 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +IS+ V+ A ++L++ +++ SY +T +L +LS +N++ Sbjct: 317 HISELESVDPFEAASRLTSTQTQLQASYAVTARLSQLSFVNFM 359 >gi|218507948|ref|ZP_03505826.1| flagellar hook-associated protein FlgL [Rhizobium etli Brasil 5] Length = 127 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 72/126 (57%) Query: 232 IDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVL 291 I+ S N + G+R +V+ + L +NL+ A ++K+ +S + SG++ Q + L Sbjct: 2 IESSTNAHSEGMRYFALASVMTSALLGQNLSTDAMTTVSKQAISYTAKATSGLVTQASQL 61 Query: 292 GISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 G+S++ + + L ++NII + GV+ + A + TL ++E +Y I +K+Q+L Sbjct: 62 GLSQERVKKSNDALDAQSNIIKNKLVDLQGVDPYEASTLVKTLETQLETAYTIVSKIQQL 121 Query: 352 SILNYL 357 S++NYL Sbjct: 122 SLVNYL 127 >gi|218674574|ref|ZP_03524243.1| flagellar hook-associated protein FlgL [Rhizobium etli GR56] Length = 124 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 70/123 (56%) Query: 235 SANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGIS 294 S N N G+R + +V+ + ++L+D A++ + K + Q SGI+ Q++ LG+S Sbjct: 2 STNANSDGMRYLALASVVVSALFGQDLSDDAKSTVASKAIGYAAQATSGIVTQQSQLGLS 61 Query: 295 EKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSIL 354 ++ + + L +++++ + GV+ + A ++ L ++E +Y + +KLQ LS++ Sbjct: 62 QERLEKADDALDAQSSLLQGKLVDLQGVDTYEASTLVNQLQTQLETAYTLVSKLQSLSLV 121 Query: 355 NYL 357 NYL Sbjct: 122 NYL 124 >gi|119385425|ref|YP_916481.1| putative flagellar hook-associated protein [Paracoccus denitrificans PD1222] gi|119375192|gb|ABL70785.1| putative flagellar hook-associated protein [Paracoccus denitrificans PD1222] Length = 339 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 78/340 (22%), Positives = 134/340 (39%), Gaps = 40/340 (11%) Query: 28 KLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQ 87 +L +EM++G SD LG + I E + + S RL+T QA L + Sbjct: 29 RLTQEMISGVKSDIPKALGGDLAGISHIESRLQLLTTFQQNASEAQNRLTTMQAALEQVY 88 Query: 88 KIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKP 147 +V D+ GP ++ + + A + + S + N + GQYLF+G + P Sbjct: 89 GVVDDL-GPRLLSEPNISGEHDLRARADSTKQDFRSMFSVLNTSIGGQYLFAGSRTDSAP 147 Query: 148 LNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDD 207 L SFD ML S +AG A + D I D + Sbjct: 148 LG-----------SFDVMLAEL-----TSTVAG------VTTAADIADRIDAWFDAPAGM 185 Query: 208 EYWANNWSNASDH-NIKYRIKDTEGIDVSANVNMRGIRD-------IMFVAVIGTEFLSK 259 +A+ D+ + ++ I ID S N +RD I + + G + Sbjct: 186 GGFADRIYQGDDNGSTRFSISPDRQIDKSLTANSTALRDTLKGMAIIAYASEAGAAIDTA 245 Query: 260 NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKS 319 L D L + + + +G +G+I +A LG + + + + +N I+++ Sbjct: 246 TLRD-----LFSEAGTRLLKGAAGLISAQADLGRQQAIVTQAQT--RNSAETAALSIART 298 Query: 320 --IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 IG + L KI+ Y IT +L +L++ +YL Sbjct: 299 NLIGADPFETVTTLEETEAKIQSLYAITARLSRLNLTDYL 338 >gi|89068726|ref|ZP_01156112.1| flagellar hook-associated protein [Oceanicola granulosus HTCC2516] gi|89045689|gb|EAR51751.1| flagellar hook-associated protein [Oceanicola granulosus HTCC2516] Length = 353 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/359 (19%), Positives = 138/359 (38%), Gaps = 38/359 (10%) Query: 14 RMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVT 73 R ++ T D+V +E+ TG+ +D GA T +L+ ++ ++ + Sbjct: 18 RQDVATVRDRLDNVG--QEVATGKRTDIYRAAGADATELLQLHAAFERQQAQIDADKALA 75 Query: 74 KRLSTSQAHLSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD 132 RL + + S++ + + + V + + G D + + E + N Sbjct: 76 TRLDAMSSVMDSIRTLGEQVRTAAVNLTVTGSGDYGALKAAS---HTALEHMIGQLNTRH 132 Query: 133 EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFL-------------EENSKSLLA 179 G LF+G+ ++ L G+ D+ + ++ G + + ++L A Sbjct: 133 AGAALFAGVETASAALTGWTDADTGTGQVPRDLVAGIIGGGITDAADAAAKAADLEALFA 192 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 G E + N D + S RI +D N Sbjct: 193 GPDFEATFYNGAPQVDGAGNPVPRLS------------------ARIDAGVTLDFGVQAN 234 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDG-ARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 +RD+ + F + DG AR + G+SG IE A LG + Sbjct: 235 DGPLRDLYRGLAMFAAFDVSAIADGPAREAWIGAATDALSSGISGTIEMEARLGSQRNAL 294 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +E L++++++ + I+ V+ + A +L+ L ++E SY++T +L LS L Y+ Sbjct: 295 DETLALLESRSDLYNAQINDLQSVDPYEAATRLADLETQLEASYLVTRRLADLSFLRYM 353 >gi|163744344|ref|ZP_02151704.1| flagellar hook-associated protein [Oceanibulbus indolifex HEL-45] gi|161381162|gb|EDQ05571.1| flagellar hook-associated protein [Oceanibulbus indolifex HEL-45] Length = 353 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/305 (21%), Positives = 133/305 (43%), Gaps = 32/305 (10%) Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML----RDSY 121 L SN+L+ +R + L +M+ + Q +L + + ++ ++ L R + Sbjct: 68 LTSNALLDRRFLAVETSLGAMRDVGQS------VLEQAFSSDSAGGLSTTYLQQAARTAL 121 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 + + A ++D +L SG S PL + ++ + G N+ + + G Sbjct: 122 DQVLERAAVSDSSGFLMSGTRSDTNPLQTWDVQNPNS---------GVSPANAVANVIG- 171 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEY-WANNWSNA-------SDHNIKYRIKDTEGID 233 + + + Q D +K FSD ANN+ N + + R +T+ + Sbjct: 172 GVPATLADVQTAIDGLKA---AFSDTAADPANNFENTFYNGAPTGNPPLTSRTSETQTLT 228 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTD-GARNVLTKKMLSTVQQGLSGIIEQRAVLG 292 +A N +RD+M + + F ++ D AR+ + S + GL G+ + G Sbjct: 229 QTAQANDPAMRDLMRGLAMLSAFNPSDIPDEAARDAWLSEARSAIGAGLEGLTDLETQTG 288 Query: 293 ISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLS 352 + + + +++ ++ + GV+Q+ A +L+ L N++E SY +T +L +LS Sbjct: 289 LKRGQLADSISAQESRALFLNGEVMNLEGVDQYDAATRLTQLQNQLESSYAVTARLSRLS 348 Query: 353 ILNYL 357 LNYL Sbjct: 349 FLNYL 353 >gi|254473339|ref|ZP_05086736.1| flagellar hook-associated protein 3 (HAP3) FlgL, putative [Pseudovibrio sp. JE062] gi|211957455|gb|EEA92658.1| flagellar hook-associated protein 3 (HAP3) FlgL, putative [Pseudovibrio sp. JE062] Length = 276 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 51/234 (21%), Positives = 101/234 (43%), Gaps = 20/234 (8%) Query: 134 GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEEN----------SKSLLAGQHL 183 G Y+F GIN+ P+N + + + +Q Q F + +K AG+ Sbjct: 53 GVYVFGGINTGTAPVNDFKSLPGGPEVQIEQAFQTFFGHSIDDPATESIPAKGDPAGKDW 112 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 E +A +D F D W +WS+A++ + I++ S + N + Sbjct: 113 ETFLDSAG--------FKDIFGAD--WTTHWSSATNEKMTSTIENGVTTTGSGSANEKAF 162 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 ++ I F NL A +T + ++++ G+ I A G + N+ Sbjct: 163 GELAEGLSIVAVFGKLNLNTEAEKFITDRAVNSLNSGVDKTIVIEAQNGAIKTNVERTNS 222 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + K ++++ I+ ++++ A +LS ++E +Y IT K++ L+I+ YL Sbjct: 223 DIIAKKDVLNMRINDLENIDENRAAVELSLAQTQLEATYAITAKIKDLNIMKYL 276 >gi|218658935|ref|ZP_03514865.1| flagellar hook-associated protein FlgL [Rhizobium etli IE4771] Length = 110 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 4/111 (3%) Query: 225 RIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGI 284 RI ++E I+ S N N G+R +V+ + L +NL+ A ++K+ +S + SG+ Sbjct: 2 RISNSEVIESSTNANSEGMRYFALASVMTSALLGQNLSTDAMTTVSKQAISYTAKATSGL 61 Query: 285 IEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLI 335 + Q + LG+S++ + + L ++NII + GV+ + A STL+ Sbjct: 62 VTQASQLGLSQERVKKSNDALDAQSNIIKNKLVDLQGVDPYEA----STLV 108 >gi|23005491|ref|ZP_00048278.1| COG1344: Flagellin and related hook-associated proteins [Magnetospirillum magnetotacticum MS-1] Length = 127 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/126 (23%), Positives = 64/126 (50%) Query: 232 IDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVL 291 + SA+ N R + V+ + + ++ A+ T K++ + QG SG+ +A L Sbjct: 1 MTTSASANAEPFRKLAMAYVVASAIGLPSFSNEAQEAATGKVMELLSQGSSGLTAMQADL 60 Query: 292 GISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 G S+ I + + ++ ++ I V+ A +++ + +++MSY +T +L+ L Sbjct: 61 GRSQSRITDANERMTKQSALLTGQIHDLESVDPAEAKSRVDAITTQMQMSYGLTAQLRSL 120 Query: 352 SILNYL 357 S++N+L Sbjct: 121 SLINFL 126 >gi|218678107|ref|ZP_03526004.1| flagellar hook-associated protein FlgL [Rhizobium etli CIAT 894] Length = 211 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 19/213 (8%) Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 SN++V R+ SQ LSS++ +V + L + D + + ++ Sbjct: 10 SSNAVVELRMDASQTALSSLKDAGDSLVTNMTAL-QASQDTTSIAVTLQTAGATISQLIS 68 Query: 127 FANMTDEGQYLFSGINSSEKPLN--GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN + G++LF+G N +PL T D++ D G + Sbjct: 69 TANTSVNGEFLFAGTNLDSQPLTDQSSTTSDAIVTALGD-------------YATGLGKD 115 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYW---ANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 V+ + +++ FI + + W ++ WS AS ++ RI +E I S N N Sbjct: 116 VNELTGEEIGTFITDTVEPMFSESAWTDASSGWSTASSTDMTSRISSSETITSSTNANSE 175 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKML 274 G+R + +V+ + S++L+ A++ + K + Sbjct: 176 GMRYLALASVVVSALFSQDLSADAQSTVASKAI 208 >gi|162147481|ref|YP_001601942.1| flagellar hook-associated protein FlgL [Gluconacetobacter diazotrophicus PAl 5] gi|161786058|emb|CAP55640.1| putative flagellar hook-associated protein [Gluconacetobacter diazotrophicus PAl 5] Length = 358 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 69/328 (21%), Positives = 140/328 (42%), Gaps = 23/328 (7%) Query: 36 GQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVG 95 GQ+ + L ++T + W+ + NSL + + +Q +S Q + ++G Sbjct: 48 GQARSAAISLAPQITQVAAWQTNVTN-----AQNSLSVQADALTQ-IVSLAQSLSTSLIG 101 Query: 96 PLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPL--NGYFT 153 + G T ++ AG + T N +D Y+F+G +S+E P+ T Sbjct: 102 -----VTGTTTDSAVTATAGEATTALSELATVLNTSDGSGYVFAGKDSTEPPIEDTASVT 156 Query: 154 KDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANN 213 +LA + ++ ++ +++ Q ++ N + F QL S D A Sbjct: 157 SGTLATQ-IASIVSSLGSSDASTVIE-QATTAAADNTAGTSVFSSQL--SVSGDAATALQ 212 Query: 214 WS--NASDHNIKYRIKDTEGIDVSANVNMRGIRDIM--FVAVIGTEFLSKNLTDGARNVL 269 S S+ + + I T+G S IRD+M + V GT +S T G + L Sbjct: 213 KSVVTGSNTSTEVGIVATQGTAASLTSTGSPIRDLMRDMMIVSGTSGMSST-TSGYSD-L 270 Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 ++ S++Q +S + + + +G ++ N+ L + N + + + + Sbjct: 271 VSQVYSSLQTTISQLTDMESSVGTTQDNLTANATLLTSMNTALTGQLGDARDADLAAVAV 330 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 Q S+L ++ SYM+ + ++ L++ NY+ Sbjct: 331 QSSSLDTSLKASYMLVSDMKSLTLANYI 358 >gi|209545590|ref|YP_002277819.1| flagellar hook-associated protein FlgL [Gluconacetobacter diazotrophicus PAl 5] gi|209533267|gb|ACI53204.1| putative flagellar hook-associated protein [Gluconacetobacter diazotrophicus PAl 5] Length = 358 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 69/328 (21%), Positives = 140/328 (42%), Gaps = 23/328 (7%) Query: 36 GQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVG 95 GQ+ + L ++T + W+ + NSL + + +Q +S Q + ++G Sbjct: 48 GQARSAAISLAPQITQVAAWQTNVTN-----AQNSLSVQADALTQ-IVSLAQSLSTSLIG 101 Query: 96 PLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPL--NGYFT 153 + G T ++ AG + T N +D Y+F+G +S+E P+ T Sbjct: 102 -----VTGTTTDSAVTATAGEATTALSELATVLNTSDGSGYVFAGKDSTEPPIEDTASVT 156 Query: 154 KDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANN 213 +LA + ++ ++ +++ Q ++ N + F QL S D A Sbjct: 157 SGTLATQ-IASIVSSLGSSDASTVIE-QATTAAADNTAGTSVFSSQL--SVSGDAATALQ 212 Query: 214 WS--NASDHNIKYRIKDTEGIDVSANVNMRGIRDIM--FVAVIGTEFLSKNLTDGARNVL 269 S S+ + + I T+G S IRD+M + V GT +S T G + L Sbjct: 213 KSVVTGSNTSTEVGIVATQGTAASLTSTGSPIRDLMRDMMIVSGTSGMSST-TSGYSD-L 270 Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 ++ S++Q +S + + + +G ++ N+ L + N + + + + Sbjct: 271 VSQVYSSLQTTISQLTDMESSVGTTQDNLTANATLLTSMNTALTGQLGDARDADLAAVAV 330 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 Q S+L ++ SYM+ + ++ L++ NY+ Sbjct: 331 QSSSLDTSLKASYMLVSDMKSLTLANYI 358 >gi|296531744|ref|ZP_06894569.1| possible flagellar hook-associated protein [Roseomonas cervicalis ATCC 49957] gi|296267927|gb|EFH13729.1| possible flagellar hook-associated protein [Roseomonas cervicalis ATCC 49957] Length = 363 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 80/359 (22%), Positives = 138/359 (38%), Gaps = 55/359 (15%) Query: 29 LHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQK 88 L EM +G+ +D LG + + + + +S SL +RL +Q L+S+ Sbjct: 30 LTAEMSSGRKADPARALGVGASLLYKLYGDVQQGEAIRNSTSLAGQRLKAAQEALTSVGG 89 Query: 89 IVQDMVGPLVILLEGKTD---NNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 ++ D + P ++ KTD N + I A R+ S N +GQ LF G +SS+ Sbjct: 90 LM-DQMSPEIL----KTDALKGNGYTIIASNAREVLGSMTDLLNTHWDGQNLFGGTDSSQ 144 Query: 146 KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFS 205 P LA + G L L A +++A Q T I Q + F+ Sbjct: 145 PP---------LAPSA------GLLAWAQGRLGAAVTAAGGALDAAQATALIGQFDTMFA 189 Query: 206 D---DEYWANNW-----------------SNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + D A ++ SD RI E + + + +D Sbjct: 190 NVQRDAAGATSFYGLVYRSTSRTDMAGSSDPESDAPSLIRIGAGETLSWNVRADNAAFKD 249 Query: 246 IM--FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN---- 299 + + L++ AR L + + G + + VLG + + Sbjct: 250 AFKSLALLSLLGAPASQLSEEARTTLLDEAGRLMGSGRAKLTVLAGVLGGKQDRLEKVGE 309 Query: 300 -EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +ER I D G + +T +++TL ++E +Y IT +L +LS++NYL Sbjct: 310 IQERAVAAATAQINDLE-----GADYYTVSDRINTLRIQLEATYSITARLSELSLVNYL 363 >gi|294675566|ref|YP_003576181.1| flagellar hook-associated protein FlgL [Rhodobacter capsulatus SB 1003] gi|294474386|gb|ADE83774.1| flagellar hook-associated protein FlgL [Rhodobacter capsulatus SB 1003] Length = 338 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 77/369 (20%), Positives = 149/369 (40%), Gaps = 57/369 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVT-------SILEWEQE 58 +S + + R N+ +L +L EE+VTG S D G ++G T S++ E Sbjct: 9 MSQTYLMRRHNV---QLKTTMSRLSEEVVTGISQDLGTKVGGDFTALAAIDRSMVRGEAY 65 Query: 59 KNHIAERLHSNSLVTKRLS-TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 K AE T L+ T Q L ++Q Q +G +I + N A Sbjct: 66 KQVAAE--------TDLLAGTQQDALETIQGHAQ-AIGATLISASFASSYNMIESGAQNA 116 Query: 118 RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSL 177 +E+ V N+ G+Y FSG + KP+ ++ ++ Sbjct: 117 EQRFEAVVDALNVNVAGRYAFSGTTTDTKPV-----------------------ASADTI 153 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKF----SDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++ VS M D I ++D F + + +++ R+ +T+ Sbjct: 154 ISSLEAVVSGMTVA--ADIIAAVDDWFDAAAGGGGFLDQGYLGSANSLSPVRLSETDSAQ 211 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDG---ARNVLTKKMLSTVQQGLSGIIEQRAV 290 ++ IR+++ +GT ++++L R +L + + + RA Sbjct: 212 LTITAGDSSIRNMLKGFALGT-LVARDLVPDNIETRALLIRTAGDRITSAEGEMTTLRAG 270 Query: 291 LGISEKNINEERVFLQNKNNIIDTYISKS--IGVEQHTAHAQLSTLINKIEMSYMITTKL 348 LG E I++ + +N + I++ IGV+++ L +++E Y +T++L Sbjct: 271 LGTVEAIISDAQT--RNSAQVTALEIARKELIGVDEYETATALEATQSQLETLYTLTSRL 328 Query: 349 QKLSILNYL 357 +LS+ +YL Sbjct: 329 TQLSLTDYL 337 >gi|254464892|ref|ZP_05078303.1| flagellar hook-associated protein FlgL family protein [Rhodobacterales bacterium Y4I] gi|206685800|gb|EDZ46282.1| flagellar hook-associated protein FlgL family protein [Rhodobacterales bacterium Y4I] Length = 335 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 73/344 (21%), Positives = 139/344 (40%), Gaps = 37/344 (10%) Query: 21 ELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQ 80 EL ++ L EE TG+SS+ +LG T + + E N I + +NS V +T+Q Sbjct: 21 ELKENVTTLSEEFATGKSSNLSERLGGDFTYLADLESSLNRIGSYMVANSEVRLFATTTQ 80 Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSG 140 L + V+ M ++ L D + S + N + G+ +F+G Sbjct: 81 GSLDKVHSQVEAMRND-ILRLSPALDTENAQQFGSQAKQRLASAINLMNTSVGGRTIFAG 139 Query: 141 INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQL 200 + KPLN N+ +L+ EVS + D I+++ Sbjct: 140 TATDTKPLN-----------------------NTSTLMTAVLAEVSGLTTSN--DIIQEV 174 Query: 201 EDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV-----NMRGIRDIMFVAVIGTE 255 +D F D + S +++ + EG V+ + N++ + + E Sbjct: 175 KDWFDDPAGFDAVMYRGSTTSLQ-PVTVGEGEQVTLGIRADDENLKHALQSYVITALADE 233 Query: 256 FLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 S L++ + L K S + + +I+ +A +G E + E V +N+ + Sbjct: 234 -PSLGLSEDVQIDLVIKASSELTESADRLIDLQADVGFIEGQL--EAVNTRNEASKTSLS 290 Query: 316 ISKS--IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I K+ + + + + +L ++E Y IT + +LS+L Y+ Sbjct: 291 IVKNKLVSADPYETYTRLQEAQTQLEGLYTITARSSQLSLLKYI 334 >gi|83955133|ref|ZP_00963789.1| flagellar hook-associated protein [Sulfitobacter sp. NAS-14.1] gi|83840462|gb|EAP79635.1| flagellar hook-associated protein [Sulfitobacter sp. NAS-14.1] Length = 359 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 74/363 (20%), Positives = 163/363 (44%), Gaps = 18/363 (4%) Query: 5 GISTSS-----IFERMNI--LTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQ 57 GIS+ S +F R N+ T EL + + EE+ TG+ +D LG R S+++ Sbjct: 4 GISSFSSFQFNLFNRQNVQRTTLELQR----VSEEVSTGKKADIYTDLGPRAASVMKLHG 59 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 + + + SN ++ +L A + + + VQ ++ L+ D N + Sbjct: 60 REANTQTFMTSNDVLASKLDAMLASVDAARTQVQSVLES--ALVNATRDGNGAEVLQMQA 117 Query: 118 RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSL 177 R + ES V+ N + G+ LFSG+ S++ L + + +S +++ Sbjct: 118 RAALESLVSTMNTSYNGENLFSGLESNKTSLTRWPETSADTGRSPQSVVEEIFGAGPTDP 177 Query: 178 LAGQHL--EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVS 235 + Q + ++ ++ Q D + + F + S A I + + + Sbjct: 178 ASAQAIADQLEAVFNSQDADASRNFQGTFYQGSP-ERDASGAETKQISAWVNTGQEVVYG 236 Query: 236 ANVNMRGIRDIM-FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGIS 294 N + RD +A++ +S+ + + A + +++ ++ G+++ A +G + Sbjct: 237 VRANDQSFRDAYKGLAMLAVTDVSQ-MDEAAYSTWMSEVVDSLSASQEGMLDISARIGFN 295 Query: 295 EKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSIL 354 ++ + + + L + + + T IS V+ + A ++++L +++ SY ++++L LSIL Sbjct: 296 QEIVEKTQTQLTDLSLVQRTQISNYESVDPYEAITRMNSLETQLQASYQVSSRLSSLSIL 355 Query: 355 NYL 357 NYL Sbjct: 356 NYL 358 >gi|163794164|ref|ZP_02188137.1| flagellar hook-associated protein [alpha proteobacterium BAL199] gi|159180778|gb|EDP65297.1| flagellar hook-associated protein [alpha proteobacterium BAL199] Length = 339 Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust. Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 32/291 (10%) Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG 134 + +T A L + I QD+ + +EG DN+ + A + + N T G Sbjct: 73 KTTTIDASLVTFTDITQDLRKKMYEQVEGLFDNSSLAL-ATYANAAIDQLTNLLNQTSGG 131 Query: 135 QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 Q+LF+G ++ +PL + +K ++ + G L +L AG T Sbjct: 132 QFLFNGADTDTQPL----LSATASKAAYAAHVFGALGPGQPALSAGAG----------AT 177 Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSAN--VNMRGIRDIMFV--A 250 D I +ED FS D W NN + + +++ RI +G+DVS N ++ V A Sbjct: 178 DVIAFVEDFFSTDANW-NNVTAPAPGSLQARID--KGVDVSFGELGNDDAFEEVFEVLYA 234 Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQG---LSGIIEQRAVLGIS-EKNINEERVFLQ 306 F + + D L L V+ ++ ++ Q V+G E N+ R L Sbjct: 235 FANANFQAGD--DTEYQALVTWGLGKVEAAFDLINDMVGQNGVIGAQLETNLEAHREGL- 291 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +++T + V+ + A + TL ++E S+ T L+ LS+ Y+ Sbjct: 292 ---TLLETQVLDIEDVDAYEAVSLFQTLQAQLESSFQTTALLRNLSLTKYI 339 >gi|126730123|ref|ZP_01745935.1| flagellar hook-associated protein FlgL family protein [Sagittula stellata E-37] gi|126709503|gb|EBA08557.1| flagellar hook-associated protein FlgL family protein [Sagittula stellata E-37] Length = 332 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 82/364 (22%), Positives = 151/364 (41%), Gaps = 72/364 (19%) Query: 22 LNKDSVKLHEEM-------VTGQSSDYGLQLGARVTSILEWEQEKNHI-AERLHSN--SL 71 L + V+L EEM TG + D G L +T + ++ + A R+++ + Sbjct: 13 LRTNQVRLREEMDKLAVEVSTGFAKDPGQHLNGDLTGLQAIDRSLARLEAYRINTTEATF 72 Query: 72 VTKRLSTSQAHLSSMQKIVQDMV--------GPLVILLEGKTDNNKFPINAGMLRDSYES 123 +T + T+ + + +IV + GPL+ + +N I G+ Sbjct: 73 LTSSMQTTLDEIQTRSEIVSQTLISAELTPNGPLLKTMSEDAENALGQILNGL------- 125 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 N + G++LFSG + + + G +D L ++++ LAG Sbjct: 126 -----NRSVAGRFLFSGTATDRRAVQGI--EDLLT--------------DARASLAG--- 161 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNI-KYRIKDTEGIDVSANVNMRG 242 A MTD L+ F + S+ I R+ +TE +ANV++R Sbjct: 162 ------ATTMTDVETALDTFFGAGGTYETVTYEGSNTGISPLRLSETE----TANVDIRA 211 Query: 243 IRDIMFVAVIGTEFLSKNLTD---GARNVLTKKMLSTVQQGLSG----IIEQRAVLGISE 295 D +F V+ ++ TD G L +ML+ + L G ++E RA LG E Sbjct: 212 T-DPVFREVLKPLIMATLATDASLGFSQDLQVEMLAASGRNLLGAQQNVVELRAGLGALE 270 Query: 296 KNINEERVFLQNKNNIIDTYISKS--IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + E +N T +++ +GV+Q+ ++ ++ ++E Y IT + Q+LS+ Sbjct: 271 ARVEETNT--RNAAERTATSMARLDLVGVDQYETASRYESIRAQLESLYAITVRSQRLSL 328 Query: 354 LNYL 357 +L Sbjct: 329 AEFL 332 >gi|74317645|ref|YP_315385.1| flagellar hook-associated protein FlgL [Thiobacillus denitrificans ATCC 25259] gi|74057140|gb|AAZ97580.1| flagellin, flagellar hook-associated protein 3 FlgL [Thiobacillus denitrificans ATCC 25259] Length = 300 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 1/145 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++FE EL D VK +++ TG+ LE Q ++ ++ Sbjct: 3 ISTQTLFEAGAARLSELQSDMVKTQQQISTGRRVLTPADDPVAAARALEVTQSQSMNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ + L+ + +++QD+ +V G + + A LR +E + Sbjct: 63 GVNRDYAKSSLAAVEGSLTGVTELLQDVKTTIVAAGNGTLGDMERGYMATELRGRFEQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN 149 AN D +G YLFSG ++ P + Sbjct: 123 GMANSRDAQGNYLFSGFQTATPPFS 147 >gi|54308104|ref|YP_129124.1| flagellar hook-associated protein FlgL [Photobacterium profundum SS9] gi|46912530|emb|CAG19322.1| hypothetical flagellar hook-associated protein FlgL [Photobacterium profundum SS9] Length = 396 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 30/147 (20%), Positives = 70/147 (47%), Gaps = 4/147 (2%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTS---ILEWEQEKNHI 62 IS + F N ++ ++N+ +K+ E S L G + I ++Q+ I Sbjct: 2 ISRIANFHHYNAVSNDMNRQQIKVQENQQQLASGKRLLTAGDDPVASIYIQNFDQQNTQI 61 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + + S ++ RL+ +A ++ ++ ++ D ++++ G ++ + ++ ++ Sbjct: 62 DQSVKSITMARNRLNNEEAAITEVENLLDDAKRKSMMMVNGSLSSDDRVAHKQDMQGIFD 121 Query: 123 SFVTFANMTDE-GQYLFSGINSSEKPL 148 SF+ N DE G Y+F+G S++P Sbjct: 122 SFMNLVNSRDESGNYVFAGTQYSQQPF 148 >gi|209963557|ref|YP_002296472.1| flagellar hook-associated protein 3 FlgL, putative [Rhodospirillum centenum SW] gi|209957023|gb|ACI97659.1| flagellar hook-associated protein 3 FlgL, putative [Rhodospirillum centenum SW] Length = 355 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 65/373 (17%), Positives = 147/373 (39%), Gaps = 34/373 (9%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + IST ++ + L + + D L E+ TG+ SD +G+R +L+ + Sbjct: 1 MSVSSISTMALARQTRNLVRTMQSDMHTLELEIGTGKKSDVAGSVGSRAALLLDLRNARQ 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 AE S + RL+ Q L ++ V L + + G ++ Sbjct: 61 TTAEYRQSIQTQSSRLTLMQEALDKVRGSATQ-VRDLALSVSGSGVGAAAATIDEAALNA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 ++ + N + G+YLF+G +P+ D + KS+L+ Sbjct: 120 IQTLSSMFNSSQSGRYLFAGTRFDTRPMQPPTETAPSGIAPLDAV---------KSVLSS 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSD--------DEYWANNWSNASDHNIKYRIKDTEGI 232 ++ + + L FSD E ++ + S ++ R + + Sbjct: 171 LGPTSTAADVDAALNGPNGLSSIFSDTYGGGPAAPENFSKTFFLGSTTQVQGRAGEDLPV 230 Query: 233 DVSANVNMRGIRDIM----FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQR 288 + +R ++ +A + +E +S A + + + Q +I+ + Sbjct: 231 TYACTAGDEPVRTLLKGLYLLAAVPSESVSTE----AYQRIADQGWRLITQATDELIDTQ 286 Query: 289 AVLGISEKNINEERVFLQNKNNIIDTYISKSIG----VEQHTAHAQLSTLINKIEMSYMI 344 ++G+ E+ + ++ + D +SK I + + +L+TL ++E ++ + Sbjct: 287 GIIGLQEELLKRA----DERHEVEDGLLSKQITQMEMADPYETGLRLNTLETQLEATFAM 342 Query: 345 TTKLQKLSILNYL 357 T+++ KLS++++L Sbjct: 343 TSRISKLSLIDFL 355 >gi|218671599|ref|ZP_03521269.1| flagellar hook-associated protein FlgL [Rhizobium etli GR56] Length = 73 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 43/71 (60%) Query: 287 QRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITT 346 Q + LG+S++ + + L ++NII + GV+ + A + TL ++E +Y I + Sbjct: 3 QASQLGLSQERVKKSNDALDAQSNIIKNKLVDLQGVDPYEASTLVKTLETQLETAYTIVS 62 Query: 347 KLQKLSILNYL 357 K+Q+LS++NYL Sbjct: 63 KIQQLSLVNYL 73 >gi|83944167|ref|ZP_00956623.1| flagellar hook-associated protein [Sulfitobacter sp. EE-36] gi|83845034|gb|EAP82915.1| flagellar hook-associated protein [Sulfitobacter sp. EE-36] Length = 359 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 73/363 (20%), Positives = 163/363 (44%), Gaps = 18/363 (4%) Query: 5 GISTSS-----IFERMNI--LTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQ 57 GIS+ S +F R N+ T EL + + EE+ TG+ +D LG R S+++ Sbjct: 4 GISSFSSFQFNLFNRQNVQRTTLELQR----VSEEVSTGKKADIYADLGPRAASVMKLHG 59 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 + + + SN ++ +L A + + + VQ ++ L+ + N + Sbjct: 60 REANTQTFMTSNDVLASKLDAMLASVDAARTQVQSVLES--ALVNATRNGNGAEVLQMQA 117 Query: 118 RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSL 177 R + ES V+ N + G+ LFSG+ S++ L + + +S +++ Sbjct: 118 RAALESLVSTMNTSYNGENLFSGLESNKTSLTRWPETSADTGRSPQSVVEEIFGTGPTDP 177 Query: 178 LAGQHL--EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVS 235 + Q + ++ ++ Q D + + F + S A I + + + Sbjct: 178 ASAQAIADQLETVFNSQDADASRNFQGTFYQGSP-ERDASGAETKQISAWVNTGQEVVYG 236 Query: 236 ANVNMRGIRDIM-FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGIS 294 N + RD +A++ +S+ + + A + +++ ++ G+++ A +G + Sbjct: 237 VRANDQSFRDAYKGLAMLAVTDVSQ-MDEAAYSTWMSEVVDSLSASQEGMLDISARIGFN 295 Query: 295 EKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSIL 354 ++ + + + L + + + T IS V+ + A ++++L +++ SY ++++L LSIL Sbjct: 296 QQIVEKTQTQLTDLSLVQRTQISNYESVDPYEAITRMNSLETQLQASYQVSSRLSSLSIL 355 Query: 355 NYL 357 NYL Sbjct: 356 NYL 358 >gi|90411012|ref|ZP_01219026.1| flagellar hook-associated protein [Photobacterium profundum 3TCK] gi|90328225|gb|EAS44536.1| flagellar hook-associated protein [Photobacterium profundum 3TCK] Length = 396 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 30/147 (20%), Positives = 70/147 (47%), Gaps = 4/147 (2%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTS---ILEWEQEKNHI 62 IS + F N ++ ++N+ +K+ E S L G + I ++Q+ I Sbjct: 2 ISRIANFHHYNSVSNDMNRQQIKVQENQQQLASGKRLLTAGDDPVASIYIQNFDQQNTQI 61 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + + S ++ RL+ +A ++ ++ ++ D ++++ G ++ + ++ ++ Sbjct: 62 DQSVKSITMARNRLNNEEAAITEVENLLDDAKRKSMMMVNGSLSSDDRVAHKQDMQGVFD 121 Query: 123 SFVTFANMTDE-GQYLFSGINSSEKPL 148 SF+ N DE G Y+F+G S++P Sbjct: 122 SFMNLVNSRDESGNYVFAGTQYSQQPF 148 >gi|299822282|ref|ZP_07054168.1| flagellar hook-associated protein 3 [Listeria grayi DSM 20601] gi|299815811|gb|EFI83049.1| flagellar hook-associated protein 3 [Listeria grayi DSM 20601] Length = 291 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 11/143 (7%) Query: 13 ERMNILTKELNKDSV---KLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSN 69 ++ N + ++N +V K ++ TG+ + + A T +L + NHI +L+ Sbjct: 7 QQTNTIINQINNANVLMGKYQTQVSTGKRYETMSENPAATTQVLSY----NHILNQLNRE 62 Query: 70 ----SLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 S L+++ LSSM + + ++ L G TD A ++ +S V Sbjct: 63 QKDVSDAKSLLTSADTSLSSMNDAMSRINAIVLQSLNGTTDEKNMNQAAEEVKGLLQSLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPL 148 + N D+G+Y+FSG +++ KP Sbjct: 123 SLGNTDDDGRYIFSGSSTNTKPF 145 >gi|148258438|ref|YP_001243023.1| hypothetical protein BBta_7240 [Bradyrhizobium sp. BTAi1] gi|146410611|gb|ABQ39117.1| hypothetical protein BBta_7240 [Bradyrhizobium sp. BTAi1] Length = 588 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 44/210 (20%), Positives = 88/210 (41%), Gaps = 21/210 (10%) Query: 157 LAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSN 216 LA S + Q F S LA + ++ S+ T Q+ + Y + Sbjct: 390 LAASSTVRATQDFFAGQSAPGLAARRIDFSAA-----TPAYAQIASTSTVTWYRGEGSTA 444 Query: 217 ASDHNIKYRIKDTEGIDVSANVNMRGIRDIMF----VAVIGTEFLSKNLTDGARNVLTKK 272 A + + T + V A N +R + VA G+ + T+ ++++ ++ Sbjct: 445 APREAVVVQASSTSALAVGARANEDALRSALAGFASVAASGSGTTTAASTERSKSLASRA 504 Query: 273 M-LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID----TYISKSIGVEQHTA 327 + L ++ + GI G+++ ++E Q++N I T + + Sbjct: 505 LALLPTREAVDGITND---FGLAQAALSEA----QSENKAIRAIHRTQLDRLESAPAEAV 557 Query: 328 HAQLSTLINKIEMSYMITTKLQKLSILNYL 357 A+L +L N+++ SY +T + KLS++NYL Sbjct: 558 VAELVSLQNRLQASYQVTAMISKLSLVNYL 587 >gi|289433984|ref|YP_003463856.1| flagellar hook-associated protein FlgL, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170228|emb|CBH26768.1| flagellar hook-associated protein FlgL, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313634356|gb|EFS00953.1| flagellar hook-associated protein 3 [Listeria seeligeri FSL N1-067] gi|313639050|gb|EFS04038.1| flagellar hook-associated protein 3 [Listeria seeligeri FSL S4-171] Length = 291 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Query: 76 LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQ 135 L+T++ LSSM + + ++ + G +D N +A ++ ++ AN D+G+ Sbjct: 73 LNTAETSLSSMTTSMNRVNALVLQAINGTSDKNNMSQSAEEIKGLLGVLLSVANAEDDGR 132 Query: 136 YLFSGINSSEKPLNGYFTKD 155 Y+FSG ++S KP FT D Sbjct: 133 YVFSGSSTSVKP----FTTD 148 >gi|167623368|ref|YP_001673662.1| flagellar hook-associated protein FlgL [Shewanella halifaxensis HAW-EB4] gi|167353390|gb|ABZ76003.1| flagellar hook-associated protein 3 [Shewanella halifaxensis HAW-EB4] Length = 396 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 11/165 (6%) Query: 6 ISTSSIF-ERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAE 64 IST+ +F + +N +T++ ++ S ++ E++ TG+ + I Q+ + + + Sbjct: 3 ISTAQMFHQNINSVTQKQSQTS-QIIEQLSTGKRVNTAGDDPVAAAGINNLNQKNSVVDQ 61 Query: 65 RLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGK-TDNNKFPINAGMLRDSYES 123 L + RLS S++ L S + + ++ + G TD+++ + A +R S E Sbjct: 62 FLKNIDYAKNRLSISESKLGSAATLASSVREQVLRAVNGSLTDSDRQTV-ADEMRGSLEE 120 Query: 124 FVTFANMTDE-GQYLFSGINSSEKPL------NGYFTKDSLAKKS 161 + AN DE G YLF G N+ +P N + DS ++S Sbjct: 121 LMAIANSKDESGNYLFGGFNTGSQPFEFDASGNAVYHGDSGVRES 165 >gi|315301956|ref|ZP_07872953.1| flagellar hook-associated protein 3 [Listeria ivanovii FSL F6-596] gi|313629674|gb|EFR97810.1| flagellar hook-associated protein 3 [Listeria ivanovii FSL F6-596] Length = 215 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Query: 76 LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQ 135 L+T++ LSSM + + ++ + G +D N +A ++ ++ AN D+G+ Sbjct: 73 LNTAETSLSSMTTSMNRVNALVLQAINGTSDKNNMSQSAEEIKGLLGVLLSVANAEDDGR 132 Query: 136 YLFSGINSSEKPLNGYFTKD 155 Y+FSG ++S KP FT D Sbjct: 133 YVFSGSSTSVKP----FTTD 148 >gi|187478192|ref|YP_786216.1| flagellar hook-associated protein 3 [Bordetella avium 197N] gi|115422778|emb|CAJ49306.1| flagellar hook-associated protein 3 [Bordetella avium 197N] Length = 410 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 13/150 (8%) Query: 6 ISTSSIFERMNILTKELNKDSV--KLHEEMVTGQ----SSDYGLQLGARVTSILEWEQEK 59 +STS I++ N L LN+++ +L E++ +G+ SD L V K Sbjct: 3 LSTSMIYQ--NGLNGILNQEAALSRLQEQLASGKRVLTPSDDPLAASLAVNVAQTASMNK 60 Query: 60 NHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 N+ A R + + + L + LSS +QD++ +V G + + +L+ Sbjct: 61 NYSANR----ATLKQSLGAEENALSSAVTTLQDVMKRVVEAGNGTMSDADRQTLSNVLKG 116 Query: 120 SYESFVTFANMTD-EGQYLFSGINSSEKPL 148 + + ++ AN TD GQYLFSG + +P Sbjct: 117 ARDQLLSLANSTDGNGQYLFSGYQGNTQPF 146 >gi|114798459|ref|YP_758979.1| putative flagellar hook-associated protein FlgL [Hyphomonas neptunium ATCC 15444] gi|114738633|gb|ABI76758.1| putative flagellar hook-associated protein FlgL [Hyphomonas neptunium ATCC 15444] Length = 325 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 66/326 (20%), Positives = 137/326 (42%), Gaps = 46/326 (14%) Query: 29 LHEEMVTGQSSDYGLQLGARV-------TSILEWEQEKNHIAERLHSNSLVTKRLSTSQA 81 + +E VTGQ +D LG R+ ++L+ E ++ + R L + L+ Q Sbjct: 28 VSQESVTGQYADLTKHLGGRIGDAMISDKALLDIEHQRGLLGVREGRLDLTQQSLAGVQE 87 Query: 82 HLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGI 141 +S ++ VQ + V + GK ++ A L D + + N ++LFSG Sbjct: 88 RISGLE--VQMLTALGVGDVPGKDLVSRDAKAA--LSDVFSAL----NSRHGDRFLFSGD 139 Query: 142 NSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLE 201 ++ +P + + DQ+L + S ++ A DF QL+ Sbjct: 140 ETATQPFS-----------NTDQLLADIRQIASTAIDA--------------ADFEVQLD 174 Query: 202 DKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNL 261 D F + W S + D + + + + I + +A+ G+ L Sbjct: 175 DYF---QSPTGGW-QTSIYGGTSLTSDQDSVTATDPAIVEIISGLAVMAISGSADNLTLL 230 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 TD + ++ + G S ++ RA +GI ++ + + + L + I+++ + +G Sbjct: 231 TDFPE--IVRESAERIGTGTSALVNLRADVGIIQERVAKAKEALDTEETILNSVHNNIVG 288 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTK 347 +Q+ A ++L L +E +Y++T++ Sbjct: 289 RDQYDAASELKQLEASLEAAYVLTSR 314 >gi|254443148|ref|ZP_05056624.1| flagellar hook-associated protein 3 [Verrucomicrobiae bacterium DG1235] gi|198257456|gb|EDY81764.1| flagellar hook-associated protein 3 [Verrucomicrobiae bacterium DG1235] Length = 303 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 5/131 (3%) Query: 20 KELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTS 79 + + KD L+E++ TGQ + A IL+ ++EK+ I + N+ + ++ + Sbjct: 17 QRVTKDMNMLNEQVATGQRISKVSEDSASANRILDMQEEKHRITQ-FSKNAARAQNINNT 75 Query: 80 QAHLSSMQKIVQ--DMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 +S +Q +Q D VG L L +G + A + + + + AN G+Y+ Sbjct: 76 T--ISQLQNFIQISDRVGELATLADGLKGADGMRAYAEEVDELIKHAMQSANAKFNGEYI 133 Query: 138 FSGINSSEKPL 148 F G++S +P Sbjct: 134 FGGVDSGTEPF 144 >gi|260950261|ref|XP_002619427.1| hypothetical protein CLUG_00586 [Clavispora lusitaniae ATCC 42720] gi|238846999|gb|EEQ36463.1| hypothetical protein CLUG_00586 [Clavispora lusitaniae ATCC 42720] Length = 603 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 4/131 (3%) Query: 91 QDMVGPLVILLEGKTDNNKFP-INAGMLRDSYESFVT-FANMTDEGQYLFSGINSSEKPL 148 QD + P G +FP I+ G L DSY V F N + Q+L NSS+ + Sbjct: 289 QDPINPFTFQSPGFNGTCQFPQISNGGLNDSYYHGVDLFTNYASKLQFLPQEYNSSQ--V 346 Query: 149 NGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDE 208 Y T + + + ++ G ENS + Q + V S+ Q D + ++ Sbjct: 347 QYYVTSNVITSQVAGALIAGMYPENSNVTVNIQRVAVDSLEPQYTCDGAVNTKASIYEEP 406 Query: 209 YWANNWSNASD 219 W + + ++D Sbjct: 407 EWVAHLNRSAD 417 >gi|255729162|ref|XP_002549506.1| predicted protein [Candida tropicalis MYA-3404] gi|240132575|gb|EER32132.1| predicted protein [Candida tropicalis MYA-3404] Length = 491 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 41/187 (21%), Positives = 80/187 (42%), Gaps = 14/187 (7%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 SIFE ++IL KE +D E+++ DY QLG ++E+ +++N+IA+ H Sbjct: 218 VQSIFEYVDILIKEPPRDDA--FEDVIERFMIDYPDQLGKLYIKLIEFFKKRNNIAKIRH 275 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 + K+ T + ++ L+ L E ++N D +E + Sbjct: 276 YYNKGIKQCKTLSDFVLIYDSYLEFEEDQLIKLAEKDPESNLL----SYFMDEFEELINN 331 Query: 128 ANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSS 187 M L IN L+ +F + L K ++++Q E ++ + L+V+S Sbjct: 332 RKMLINDTLLRQNIND----LDAWFARFDLVKDDLNKLIQTLTE----AIRSINPLKVTS 383 Query: 188 MNAQQMT 194 + ++ Sbjct: 384 VKDHKLC 390 >gi|91217388|ref|ZP_01254348.1| hypothetical protein P700755_14585 [Psychroflexus torquis ATCC 700755] gi|91184496|gb|EAS70879.1| hypothetical protein P700755_14585 [Psychroflexus torquis ATCC 700755] Length = 211 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 17/121 (14%) Query: 79 SQAHLSSMQKIVQDMVGPLVI---LLEGKTDNNKFPINAGMLRDSYESFVTFANMT---- 131 S HL S ++ M+ PL + E DN +F +N +ESF+ A+ T Sbjct: 49 SVIHLGSNPPMLSFMLRPLTVDRDTYENLKDNKQFTVN-----HIHESFIDKAHQTSANY 103 Query: 132 DEGQYLFSGINSSE---KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG--QHLEVS 186 DEG F + SE K F K+S+ K + + + F+EEN L+ G QHL Sbjct: 104 DEGISEFKEVGLSEEYIKDFKAPFVKESVIKMGCEFINEYFIEENGCRLIIGEIQHLLFP 163 Query: 187 S 187 S Sbjct: 164 S 164 >gi|90577351|ref|ZP_01233162.1| flagellar hook-associated protein [Vibrio angustum S14] gi|90440437|gb|EAS65617.1| flagellar hook-associated protein [Vibrio angustum S14] Length = 299 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 10/109 (9%) Query: 52 ILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGK---TDNN 108 +L ++E + I++ + S V LS+ + HL + ++DM L++ G D Sbjct: 49 LLNLDRENSAISQYQDNISNVKTALSSQEVHLMAASDTLKDMRDTLLLASNGAISDADRE 108 Query: 109 KFPINAGMLRDSYESFVTFANMTDEGQYLFSGINS-----SEKPLNGYF 152 + LRD++ S +F +EG YLFSG S + +P GY Sbjct: 109 SYANKLVSLRDAFMS--SFNVQDEEGNYLFSGTQSDVPAITAQPAGGYI 155 >gi|89072307|ref|ZP_01158886.1| flagellar hook-associated protein [Photobacterium sp. SKA34] gi|89051839|gb|EAR57291.1| flagellar hook-associated protein [Photobacterium sp. SKA34] Length = 299 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 10/109 (9%) Query: 52 ILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGK---TDNN 108 +L ++E + I + + S V LS+ + HL + ++DM L++ G D Sbjct: 49 LLNLDRENSAINQYQDNISNVKTALSSQEVHLMAASDTIKDMRDSLLLASNGALSDADRE 108 Query: 109 KFPINAGMLRDSYESFVTFANMTDEGQYLFSGINS-----SEKPLNGYF 152 + LRD++ S +F +EG YLFSG S + +P GY Sbjct: 109 SYANKLVSLRDAFMS--SFNVQDEEGNYLFSGTQSDVPAITSQPAGGYI 155 >gi|315281369|ref|ZP_07870007.1| flagellar hook-associated protein 3 [Listeria marthii FSL S4-120] gi|313614986|gb|EFR88492.1| flagellar hook-associated protein 3 [Listeria marthii FSL S4-120] Length = 291 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%) Query: 94 VGPLVI-LLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYF 152 V LV+ + G +D N +A ++ + V+ AN D+G+Y+FSG ++S KP F Sbjct: 90 VNALVLQAINGTSDKNNMSQSAEEIKGLLDVLVSVANAEDDGRYVFSGSSTSVKP----F 145 Query: 153 TKD 155 T D Sbjct: 146 TTD 148 >gi|116872095|ref|YP_848876.1| flagellar hook-associated protein FlgL [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740973|emb|CAK20093.1| flagellar hook-associated protein FlgL, putative [Listeria welshimeri serovar 6b str. SLCC5334] Length = 291 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%) Query: 94 VGPLVI-LLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYF 152 V LV+ + G +D N +A ++ + V+ AN D+G+Y+FSG ++S KP F Sbjct: 90 VNALVLQAINGTSDKNNMSQSAEEIKGLLDVLVSVANAEDDGRYVFSGSSTSVKP----F 145 Query: 153 TKD 155 T D Sbjct: 146 TTD 148 >gi|37680673|ref|NP_935282.1| flagellar capping protein [Vibrio vulnificus YJ016] gi|37199422|dbj|BAC95253.1| flagellar hook-associated protein FlaH [Vibrio vulnificus YJ016] Length = 701 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 13/109 (11%) Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGM------LRDSYESFVTFANMTDEG 134 A LSS I++D + + + L+G T NK P G+ +RD E+FV N + Sbjct: 477 AQLSSNNNIIEDAIEGVDLALKGVTPKNKAPAEIGVEYDRQSVRDDIETFVAAYNQFYQT 536 Query: 135 QYLFSGINSS---EKPLNGYFT---KDSLAKKSFDQMLQGFLEENSKSL 177 SG++ + + PL G T DS K F ++ EN KSL Sbjct: 537 SKALSGVDPTTGQKGPLAGDSTVRNADSRLKSVFSTRIEK-APENLKSL 584 >gi|297538903|ref|YP_003674672.1| flagellar hook-associated protein 3 [Methylotenera sp. 301] gi|297258250|gb|ADI30095.1| flagellar hook-associated protein 3 [Methylotenera sp. 301] Length = 304 Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 7/166 (4%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQ--SSDYGLQLG-ARVTSILEWEQEKNHI 62 IST++I++ + D KL E++ TG+ SS +G AR I + Sbjct: 3 ISTNTIYQAGISRISNIQSDQAKLQEQISTGRRISSPSDDPVGAARALEISAAQSGNAKF 62 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 A+ + L +L+T +++L+S+ ++ LV + + A L+ S + Sbjct: 63 ADTRQTAQL---KLNTLESNLTSITSLLVSTQSTLVGAGNATLSDTERGFMASELKGSLD 119 Query: 123 SFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ 167 + + AN D G YL++G +S P + + A S Q+LQ Sbjct: 120 ALIGLANTQDASGNYLYAGYKTSTVPFVATASGANYAGDSNQQLLQ 165 >gi|320155657|ref|YP_004188036.1| flagellar hook-associated protein FliD [Vibrio vulnificus MO6-24/O] gi|319930969|gb|ADV85833.1| flagellar hook-associated protein FliD [Vibrio vulnificus MO6-24/O] Length = 700 Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 13/109 (11%) Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGM------LRDSYESFVTFANMTDEG 134 A LSS I++D + + + L+G T NK P G+ +RD E+FV N + Sbjct: 476 AQLSSNNNIIEDAIEGVDLALKGVTPKNKAPAEIGVEYDRQSVRDDIETFVAAYNQFYQT 535 Query: 135 QYLFSGINSS---EKPLNGYFT---KDSLAKKSFDQMLQGFLEENSKSL 177 SG++ + + PL G T DS K F ++ EN KSL Sbjct: 536 SKALSGVDPTTGQKGPLAGDSTVRNADSRLKSVFSTRIEK-APENLKSL 583 >gi|315497621|ref|YP_004086425.1| flagellin domain protein [Asticcacaulis excentricus CB 48] gi|315415633|gb|ADU12274.1| flagellin domain protein [Asticcacaulis excentricus CB 48] Length = 305 Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 26/170 (15%) Query: 16 NILTKELNKDSV--KLHEEMVTGQSSDYGLQLGARVTS--------ILEWEQEKNHIAER 65 N++ ++ KD +L + V + YG GA + + I + Q +++R Sbjct: 15 NLMQAQIRKDEANNQLSTQKVATDFAGYGR--GAEIIAAYQSSLERITAYSQVAQSVSDR 72 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 L S ++ +R S +++ + + D + L+G T +L+ SY +F Sbjct: 73 LASQNIALERASDG---IATGKDGIMDAIASKS--LDGLTT---------VLQSSYMAFA 118 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSK 175 N +G YLF G N SE PL D + D G +++ SK Sbjct: 119 DGLNYKHQGAYLFGGGNESEAPLAAMSLNDLAGTPAADVFKNGSVKKASK 168 >gi|27365273|ref|NP_760801.1| flagellar capping protein [Vibrio vulnificus CMCP6] gi|27361420|gb|AAO10328.1| Flagellar hook-associated protein fliD [Vibrio vulnificus CMCP6] Length = 700 Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 13/109 (11%) Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGM------LRDSYESFVTFANMTDEG 134 A LSS I++D + + + L+G T NK P G+ +RD E+FV N + Sbjct: 476 AQLSSNNNIIEDAIEGVDLALKGVTPKNKAPAEIGVEYDRQSVRDDIETFVAAYNQFYQT 535 Query: 135 QYLFSGINSS---EKPLNGYFT---KDSLAKKSFDQMLQGFLEENSKSL 177 SG++ + + PL G T DS K F ++ EN KSL Sbjct: 536 SKALSGVDPTTGQKGPLAGDSTVRNADSRLKSVFSTRIEK-APENLKSL 583 >gi|167567757|ref|ZP_02360673.1| flagellar hook-associated protein FlgL [Burkholderia oklahomensis EO147] gi|167574708|ref|ZP_02367582.1| flagellar hook-associated protein FlgL [Burkholderia oklahomensis C6786] Length = 303 Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 8/132 (6%) Query: 72 VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT 131 +T RL +++ ++ + + D+ L+ +G P A L S V AN Sbjct: 69 LTSRLQLAESRMTGLGTGLGDVRDLLLWASDGSKPPQDLPAIAQTLETLRRSLVATANAK 128 Query: 132 D-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL-EVSSMN 189 D EG YLFSG +P+ TK ++ ++ + + ++ G + EV++ N Sbjct: 129 DGEGNYLFSGTAIKTQPIQYDETKPVGSRYTYAG------NDKQQEVIVGDGMTEVANDN 182 Query: 190 AQQMTDFIKQLE 201 ++M D + +LE Sbjct: 183 MKEMADLLNKLE 194 >gi|47208180|emb|CAF89812.1| unnamed protein product [Tetraodon nigroviridis] Length = 1636 Score = 36.2 bits (82), Expect = 8.2, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 55/103 (53%), Gaps = 7/103 (6%) Query: 69 NSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFA 128 + ++T ST + LS + + +D+ G L+ L++ + + +P + ++D +S V + Sbjct: 627 DDIITDICSTDGSDLSLLSTVCKDVPGDLIFLID--SSGSIYPEDYQKMKDFMKSLVQKS 684 Query: 129 NMTDEGQYLFSGINSSEK----PLNGYFTKDSLAKKSFDQMLQ 167 N+ + ++ S+E+ PL Y+TKD L+ K+ D M Q Sbjct: 685 NIGKDQVHVGVLQYSTEQKLVFPLIQYYTKDQLS-KAIDDMQQ 726 Searching..................................................done Results from round 2 >gi|254780523|ref|YP_003064936.1| flagellar hook-associated protein FlgL [Candidatus Liberibacter asiaticus str. psy62] gi|254040200|gb|ACT56996.1| flagellar hook-associated protein FlgL [Candidatus Liberibacter asiaticus str. psy62] Length = 357 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 357/357 (100%), Positives = 357/357 (100%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN Sbjct: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS Sbjct: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG Sbjct: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM Sbjct: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE Sbjct: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL Sbjct: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 >gi|163758034|ref|ZP_02165122.1| flagellar hook-associated protein L [Hoeflea phototrophica DFL-43] gi|162284323|gb|EDQ34606.1| flagellar hook-associated protein L [Hoeflea phototrophica DFL-43] Length = 350 Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats. Identities = 110/357 (30%), Positives = 186/357 (52%), Gaps = 7/357 (1%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKT+ IS +I M + + KL EE+VTG+ +D GL LGA+ ++ + ++ Sbjct: 1 MKTSFISNLAIQNSMRMTISRGQVEIQKLQEEVVTGRFADIGLSLGAKTSTSVSHHRDVQ 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + SN+LVT+RLSTSQ L++M Q M+ ++ G D K + + S Sbjct: 61 RLETIQDSNALVTQRLSTSQLSLAAMSDAAQQMLEAFIVA-NGTDDEPKLNVMRRDVEAS 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 E F + N + G+YLFSGIN+ KP++ Y S AK +FD + G Sbjct: 120 LELFTSSINTSVNGEYLFSGINTDVKPVDDYLEPGSGAKAAFDTLFLGHFG------FTQ 173 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 + + QM +FI + + W NWS+ASD NI RI+ E +D SAN N Sbjct: 174 DDPAAAGITTAQMDNFIDNVLEPEFMGPNWNTNWSSASDTNISSRIRTNEVVDSSANANG 233 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G+R A+IG E + ++ R + +K + Q ++GI +R+ LG+SE + + Sbjct: 234 TGMRSFALAAIIGIELMDSPISSEVRASVNEKAIEYAGQAVTGIDNERSNLGVSENRVAK 293 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + I+ +++ GV+ + A ++ +L+ ++E SY +T ++Q+L+++NYL Sbjct: 294 ANEAIEAQVRIMKLHLNDIEGVDGYEASTRMQSLLTQVETSYTLTARIQQLNLMNYL 350 >gi|315122286|ref|YP_004062775.1| flagellar hook-associated protein FlgL [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495688|gb|ADR52287.1| flagellar hook-associated protein FlgL [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 356 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 203/357 (56%), Positives = 259/357 (72%), Gaps = 1/357 (0%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK TG+STSSI +RMNILTK+L+ + KL E +TGQ DYGLQLG++VT I+E+EQEKN Sbjct: 1 MKITGVSTSSILDRMNILTKDLSNNMEKLQHESITGQCWDYGLQLGSKVTDIIEFEQEKN 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 H+ ERL + LV RLS Q H+ + + Q+ + + LL+G D + +L+DS Sbjct: 61 HVTERLRGSELVKTRLSILQKHVEKIDDVYQNALQKMP-LLQGNEDKHAIAQVVSLLQDS 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 ++S + F N T+ G+YLFSGIN+SEKPL YF KDSLAK+SFDQML+ FL+ENSK+L G Sbjct: 120 FQSTIEFFNTTEGGKYLFSGINTSEKPLQDYFAKDSLAKQSFDQMLKDFLKENSKNLPVG 179 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 Q+L+VSSMN QM DFI +LE+KFS+DEYW+ NWSNASD NIKY + ++VS NVN Sbjct: 180 QNLDVSSMNGHQMADFINKLEEKFSNDEYWSKNWSNASDQNIKYHSSNAGNLEVSVNVNS 239 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 IR+ M +VIG EFL+K+LT +RNVL KM S + QG+ + Q A LG SEK I E Sbjct: 240 DAIRNFMLFSVIGVEFLNKDLTTESRNVLNNKMASFIGQGVQDLNHQSAFLGFSEKRIEE 299 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 E FLQ+K NIIDTYI KS+ V+Q+ A L+ LINKI+MSYMIT KLQKLS+LNYL Sbjct: 300 EIKFLQDKMNIIDTYILKSVSVDQYKASVGLTELINKIDMSYMITAKLQKLSLLNYL 356 >gi|110632638|ref|YP_672846.1| flagellar hook-associated protein FlgL [Mesorhizobium sp. BNC1] gi|110283622|gb|ABG61681.1| flagellar hook-associated protein 3 (HAP3) flgL [Chelativorans sp. BNC1] Length = 349 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 100/357 (28%), Positives = 176/357 (49%), Gaps = 9/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK + +STS+I + + + D VK +E+ +G+ +D G LGAR ++E + Sbjct: 1 MKVSFVSTSAISQTLRYQMMRMQADLVKNQKELDSGRLADPGATLGARAGFSFSMDREIS 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +NSL RL+ +Q +L+ + I Q+++ L L G D I + Sbjct: 61 RLENVIDANSLAANRLTATQNNLTQLTDISQELLATLSAALSGVNDT---SIVKSGATRA 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 ES + N G+YLF+GIN+ KP+N + S K FD F A Sbjct: 118 LESMTSVLNSNFNGEYLFAGINTDVKPINDFTDPASPNKAQFDAQFLAFFG------FAQ 171 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 S + A Q+ DF+ + + W++ WS ASD I RI E + S N Sbjct: 172 NDPAASGITASQIEDFLDTVIEPAFMGTGWSDAWSGASDEKITSRIAANETAETSTTANG 231 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G+R + + + +EFL L D AR L ++ S V + + I +A +G++E + + Sbjct: 232 AGMRKLAMASAVLSEFLEIPLGDEARQTLYQRTTSLVGEAIPAIASVQAEVGLAETRLQD 291 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ ++ T+I GV+ + A +++ ++ +IE+SY +T+++Q+LS+L YL Sbjct: 292 ATDRISSQIDLFKTFIRDLEGVDPYEASTRVNEILTQIELSYALTSRIQQLSLLRYL 348 >gi|227820877|ref|YP_002824847.1| flagellar hook-associated protein FlgL [Sinorhizobium fredii NGR234] gi|227339876|gb|ACP24094.1| predicted flagellar hook-associated protein FlgL [Sinorhizobium fredii NGR234] Length = 350 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 101/358 (28%), Positives = 190/358 (53%), Gaps = 9/358 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKT+ +S ++ M + ++ ++ +KL E+ TG+ +D GL+LG+ + ++E Sbjct: 1 MKTSFVSNLAVQNAMRLTIQQGQEELLKLQTEVSTGRHADVGLELGSSTARSVNLQRELA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +NS+VT+RL++SQ L +M + + + LV +G ++ + + + Sbjct: 61 RLETLVDTNSVVTQRLASSQQALGTMAEAAEQVRNTLVTF-KGNDSVDQLSVQKTEIESA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 F AN + G++LF+GIN+ KP Y S AK +FD L ++ N + Sbjct: 120 MSLFTASANTSFNGEFLFAGINTDVKPFEDYAASGSAAKTTFDDALATYMSANGIA---- 175 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKF-SDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 +S QM DFI + +DD WA +WS AS N+ RI +E + S N Sbjct: 176 ---SMSDFTEAQMEDFITNTLEPLYTDDAQWAGDWSAASSQNMTSRISTSEVVQSSTNAT 232 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 G R +VI +E + +++ R + + L V+Q ++G+ +R+ LGISE + Sbjct: 233 TSGFRMFALASVISSELMDEDIGSEVRAYIGEASLGYVEQAITGLTAERSTLGISEARVE 292 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + L+ + +I+T+I+ GV+ + A +++TL+ ++E SY +T ++Q+LS++++L Sbjct: 293 KANTSLEVQIKLINTHITDLEGVDTYDASTRMNTLLTQMETSYTLTGRIQQLSLIDFL 350 >gi|118589964|ref|ZP_01547368.1| flagellar hook-associated protein L [Stappia aggregata IAM 12614] gi|118437461|gb|EAV44098.1| flagellar hook-associated protein L [Stappia aggregata IAM 12614] Length = 348 Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 84/357 (23%), Positives = 162/357 (45%), Gaps = 9/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKTT IST ++ + + +L E+ +G+ D GL LG + + E + Sbjct: 1 MKTTYISTITLADASRRQIQNQASLVQRLSIEVSSGRKYDVGLDLGTKTGESVSLRSEFH 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + +N+L RL SQA + + K QD + LV L E + + + Sbjct: 61 FLNGITDTNALTASRLDVSQAAMGDVLKDAQDFLSTLVALRENSGTADIVKAD---AVGN 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 E + N G ++F+GIN+ ++P Y + K + D ++ +A Sbjct: 118 LELLTSRLNTQLNGNFVFAGINTDQEPFVDYSDPGAPNKLAADAAFL------TEFGIAQ 171 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 + VS + M+ ++ D D W +WS+A+D + RI +E + S + N Sbjct: 172 TNPGVSGITPAAMSTYLNGAFDLMFQDPAWGTSWSSATDSVMVSRISASETVSSSVSANE 231 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 + RD+ + ++ +++L V+ K + + G++ I Q LG ++ + Sbjct: 232 QAFRDLAAAYTMMSDLGNEDLDPETLKVVVNKAIEKLGTGIAEITSQMGQLGNVQEQVKL 291 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L+ + +I++ I+ V+ +L+T + ++E +Y +T+++Q+LSILNYL Sbjct: 292 ASERLKVQTDILNRRINDLENVDPEETAVRLNTALTQLETTYAVTSRMQRLSILNYL 348 >gi|328545489|ref|YP_004305598.1| flagellar hook-associated protein L [polymorphum gilvum SL003B-26A1] gi|326415230|gb|ADZ72293.1| Flagellar hook-associated protein L [Polymorphum gilvum SL003B-26A1] Length = 349 Score = 325 bits (833), Expect = 7e-87, Method: Composition-based stats. Identities = 87/358 (24%), Positives = 164/358 (45%), Gaps = 10/358 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKTT IST ++ + L + + + +L EM TG+ +D GL LG+R + E Sbjct: 1 MKTTYISTFTLSDTSRGLLMKQSANLARLQVEMSTGRKADIGLDLGSRTGEAIALRSEHT 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +N+L RL +QA L + Q + LV + + + G + Sbjct: 61 RLNAIIDTNALAASRLDVTQAALGDVLGTAQSFLATLVGVR---DSDGSASVAKGEGQGG 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYF-TKDSLAKKSFDQMLQGFLEENSKSLLA 179 + ++ N G YLF+G+N+ P+ YF T + K + D + Sbjct: 118 LDLLISRLNTQVNGNYLFAGLNTDVAPMANYFETPAASNKAAVDAAFVARFG------FS 171 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 VS+++A M DF+ DD W +WS+AS+ + RI +E + +S + N Sbjct: 172 QDDPAVSTISAADMDDFLTNFYMPLFDDPAWGADWSSASNDAVSSRISASETLGISVSAN 231 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 R + V + + + L + A + K + + + + G+ + + +GI+++ ++ Sbjct: 232 ETAFRTLAAVFTMLADLGTGQLGEAAYGAVVDKAIGLLGEAIGGVTDLMSRMGIAQERVS 291 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L + I++ I+ V +L+T I ++E +Y ++ ++Q+LSILNYL Sbjct: 292 NASDRLAIQAGILNQRINVLENVNPEETAVRLNTAITQLETTYAVSARIQRLSILNYL 349 >gi|241203126|ref|YP_002974222.1| flagellar hook-associated protein FlgL [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857016|gb|ACS54683.1| flagellar hook-associated 3 family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 350 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 102/360 (28%), Positives = 175/360 (48%), Gaps = 13/360 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK++ IS+S+I M + ++ K E TG +D G+ LG +++ +E + Sbjct: 1 MKSSFISSSAIQNAMRLTIRQAQNQMTKATMEATTGVYADIGVSLGGNAARSVDFSREVD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 I SNSLVT R+ +SQ LS M+ + +V L L +G D + + Sbjct: 61 RIDSIKSSNSLVTARMESSQLGLSKMKDVGDGLVSKLTAL-QGSHDPGSITVAIQSATSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + AN G+YLFSGIN+ +PL T S A + E N+ + Sbjct: 120 LSTMMDTANTMVNGEYLFSGINTDVQPLTDKTTATSAAIVT---------ELNTYAAALV 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA---NNWSNASDHNIKYRIKDTEGIDVSAN 237 VS++ +M+ FI + W WS AS N+ RI ++E I+ S N Sbjct: 171 PPKAVSALTGAEMSTFITTKVEPMFSQAAWTDPTTGWSQASSQNMTSRISNSEVIESSTN 230 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 N G+R +V+ + L + L+ A + ++K+ +S + SG++ Q + LG+S++ Sbjct: 231 ANSEGMRYFALASVMTSALLGQGLSSDAMSTVSKQAISYTTKATSGLVTQASQLGLSQER 290 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + L ++NII + GV+ + A + TL ++E +Y I +K+Q+LS++NYL Sbjct: 291 VKKSNDALDAQSNIIKNKLVDLQGVDPYEASTLVKTLETQLETAYTIVSKIQQLSLVNYL 350 >gi|222147591|ref|YP_002548548.1| flagellar hook-associated protein FlgL [Agrobacterium vitis S4] gi|221734579|gb|ACM35542.1| flagellar hook-associated protein [Agrobacterium vitis S4] Length = 355 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 112/362 (30%), Positives = 191/362 (52%), Gaps = 12/362 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKT+ IS+ +I M + + K E+ TG+ +D G +LGA+ +S ++ ++ Sbjct: 1 MKTSSISSLTIQNAMRLTISDAQKQMSDAQTEVTTGKYADVGTELGAKTSSAVDLNRDSL 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +NS+V+ RL SQ L ++ M LV L TD+ ++ + Sbjct: 61 RLQSLMDTNSIVSTRLDASQTALDTIASAATTMQSTLVGL-GTSTDSTTLDSAQKTMKSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKD-----SLAKKSFDQMLQGFLEENSK 175 +SF+ AN + G+YLFSGIN+ KP+ Y+ D + AK++FD + G+ Sbjct: 120 MDSFIDAANTSVNGEYLFSGINTDVKPITDYYYIDDDGNETDAKQNFDNLFSGYFG---- 175 Query: 176 SLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVS 235 ++ VS ++A QM DF++ + + D W +NWS A+D + RI E I S Sbjct: 176 --MSPDDDGVSGISADQMDDFMENVLEPSFDGADWTDNWSAATDETMTSRISKNEVIQSS 233 Query: 236 ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISE 295 ++ N G R V+VIG+E L+ N + RN + K + +SGI ++R LG+S+ Sbjct: 234 SSANSDGFRYTGLVSVIGSEMLNGNYSTETRNAMISKAIEYSGLAVSGINDERTQLGLSQ 293 Query: 296 KNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + + L ++ +II+ IS GV+ + A +L+ L + +E SY +T +LQKLS+++ Sbjct: 294 ERVTNANDSLTSQKDIIENQISDLTGVDAYEASTRLNNLQSLVETSYTLTARLQKLSLVD 353 Query: 356 YL 357 YL Sbjct: 354 YL 355 >gi|15887921|ref|NP_353602.1| flagellar hook-associated protein FlgL [Agrobacterium tumefaciens str. C58] gi|15155517|gb|AAK86387.1| flagellar hook-associated protein [Agrobacterium tumefaciens str. C58] Length = 367 Score = 322 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 99/374 (26%), Positives = 189/374 (50%), Gaps = 24/374 (6%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKT+ IS+ ++ M + + L+ E+ TG+ +D GL LGA L+ ++ + Sbjct: 1 MKTSFISSLAMQNSMRSTILKAQLEMTNLNTELTTGKHADLGLTLGANTARSLDLNRDID 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 I+ + NS+ T+RL +SQ L M K Q++ LV ++ + + ++ Sbjct: 61 RISSLVSVNSIATQRLKSSQTALDGMAKAAQEIQKVLV--PNTSSEAPTLTTVSQTISNA 118 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + +F +FAN G++LFSGIN+ KP++ YF S K +++ L F+ + Sbjct: 119 FNNFTSFANTAVNGEFLFSGINTDVKPVDDYFADGSPLKAAYETELNAFMAAQT-----P 173 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDE-----------------YWANNWSNASDHNIK 223 + +S++ Q+ F+ +E F +W S AS+ N+ Sbjct: 174 PVGDFASLSKTQVEGFMTHIEGVFKGTTTVTNPPHTSLTAGQNYDFWTTFGSKASNTNMT 233 Query: 224 YRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSG 283 RI E ++ S+N N +G+R A+ FL + G R ++ K ++ + ++G Sbjct: 234 SRISQNEIVETSSNSNSQGMRYFALTAMTSMTFLDPKVDSGIREMVAMKSVTNIGTAING 293 Query: 284 IIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYM 343 + +Q++ LG+SE +++ L+ + II+T++ G++ + A +L L +IE++Y Sbjct: 294 LNQQQSQLGLSESRVSKANDSLEAQKKIIETHLLDIEGIDTYEAKTRLDLLQQQIEIAYS 353 Query: 344 ITTKLQKLSILNYL 357 +T++LQK+S++NYL Sbjct: 354 LTSRLQKMSLVNYL 367 >gi|116250502|ref|YP_766340.1| flagellar hook-associated protein FlgL [Rhizobium leguminosarum bv. viciae 3841] gi|115255150|emb|CAK06224.1| putative flagellar hook-associated protein [Rhizobium leguminosarum bv. viciae 3841] Length = 348 Score = 322 bits (824), Expect = 8e-86, Method: Composition-based stats. Identities = 100/360 (27%), Positives = 172/360 (47%), Gaps = 15/360 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK++ IS+S+I M + ++ K E TG +D G+ LG +++ +E + Sbjct: 1 MKSSFISSSAIQNAMRLTIRQAQNQMTKATMEATTGVYADIGVSLGGNAARSVDFSREVD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 IA SNSLVT R+ +SQ LS M+ + +V L L +G D + + Sbjct: 61 RIASIKSSNSLVTARMESSQLGLSKMKDVGDGLVSKLTAL-QGSHDPGSITVAIQSATSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + AN G+YLFSGIN+ +PL S + + G Sbjct: 120 LSTMMDTANTMVNGEYLFSGINTDVQPLTDKTAATSADIVTA-----------LNTYATG 168 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN---NWSNASDHNIKYRIKDTEGIDVSAN 237 VS + +M FI + + W + WS AS N+ RI ++E I+ S N Sbjct: 169 LGKSVSDLTGTEMETFITTTVEPMFTEAAWTDPTTGWSQASSQNMTSRISNSEVIESSTN 228 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 N G+R +V+ + L + L+ A + ++K+ +S + SG++ Q + LG+S++ Sbjct: 229 ANSEGMRYFALASVMTSALLGQGLSSDAMSTVSKQAISYTTKATSGLVTQASQLGLSQER 288 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + L ++NII + GV+ + A + TL ++E +Y I +K+Q+LS++NYL Sbjct: 289 VKKSNDALDAQSNIIKNKLVDLQGVDPYEASTLVKTLETQLETAYTIVSKIQQLSLVNYL 348 >gi|209547948|ref|YP_002279865.1| flagellar hook-associated protein FlgL [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533704|gb|ACI53639.1| flagellar hook-associated 3 family protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 350 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 101/360 (28%), Positives = 174/360 (48%), Gaps = 13/360 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK++ IS+S+I M + ++ K E TG +D G+ LG +++ +E + Sbjct: 1 MKSSFISSSAIQNAMRLTIRQGQNQMTKATMEATTGVYADIGVSLGGNAARSVDFTRETD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 I SNSLV R+ +SQ LS M+ + +V L L +G D + + Sbjct: 61 RIDSIKASNSLVAARMESSQLGLSKMKDVGDGLVSKLTAL-QGSHDPGSVTVAIQSATSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + AN G+YLFSGIN+ +PL T S A + NS + Sbjct: 120 LSTMMDTANTMVNGEYLFSGINTDVQPLTDKTTATSAAIVT---------ALNSYAAGLA 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA---NNWSNASDHNIKYRIKDTEGIDVSAN 237 VS++ +M FI + W WS AS N+ RI ++E I+ S N Sbjct: 171 PPKAVSALTGAEMETFITGTVEPMFSQANWTNATTGWSQASSQNMTSRISNSEVIESSTN 230 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 N G+R + +V+ + L +NL+ A + ++K+ ++ + SG++ Q + LG+S++ Sbjct: 231 ANSEGMRYMALASVMTSALLGQNLSSDAMSTVSKQAITYTTKATSGLVTQASQLGLSQER 290 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + L ++NII + GV+ + A + TL ++E +Y I +K+Q+LS++NYL Sbjct: 291 VKKSNDALDAQSNIIKNKLVDLQGVDPYEASTLVKTLETQLETAYTIVSKIQQLSLVNYL 350 >gi|225628427|ref|ZP_03786461.1| flagellar hook-associated protein FlgL [Brucella ceti str. Cudo] gi|225616273|gb|EEH13321.1| flagellar hook-associated protein FlgL [Brucella ceti str. Cudo] Length = 351 Score = 320 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 95/357 (26%), Positives = 162/357 (45%), Gaps = 10/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 4 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 63 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q + + Q+ +G L A R Sbjct: 64 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA---GANNSGETAKTVAKSARSM 120 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q A Sbjct: 121 LDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFG------FAM 173 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V++++ +M F++ + +D WA NWS+ASD IK RI TE D S + N Sbjct: 174 DDPQVANISGDEMKAFLEGDFAEQFNDANWAANWSDASDTRIKSRISPTETADTSISANA 233 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R + AV+ TEF L A + LT + L Q ++ ++ LG+++ Sbjct: 234 DGFRKKVMSAVMVTEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGLAQSRTEA 293 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + I++ + V+ + A +++ L +IE SY +T +LQ +S+LNYL Sbjct: 294 ATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSLLNYL 350 >gi|148558140|ref|YP_001258002.1| flagellar hook-associated protein FlgL [Brucella ovis ATCC 25840] gi|237817500|ref|ZP_04596491.1| flagellar hook-associated protein FlgL [Brucella abortus str. 2308 A] gi|148369425|gb|ABQ62297.1| putative flagellar hook-associated protein FlgL [Brucella ovis ATCC 25840] gi|237787335|gb|EEP61552.1| flagellar hook-associated protein FlgL [Brucella abortus str. 2308 A] Length = 351 Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 95/357 (26%), Positives = 162/357 (45%), Gaps = 10/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 4 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 63 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q + + Q+ +G L A R Sbjct: 64 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA---GANNSGETAKTVAKSARSM 120 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q A Sbjct: 121 LDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFG------FAM 173 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V++++ +M F++ + +D WA NWS+ASD IK RI TE D S + N Sbjct: 174 DDPQVANISGDEMKAFLEGDFAEQFNDANWAANWSDASDTRIKSRISPTETADTSISANA 233 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R + AV+ TEF L A + LT + L Q ++ ++ LG+++ Sbjct: 234 DGFRKTVMSAVMVTEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGLAQSRTEA 293 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + I++ + V+ + A +++ L +IE SY +T +LQ +S+LNYL Sbjct: 294 ATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSLLNYL 350 >gi|254706498|ref|ZP_05168326.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis M163/99/10] gi|254711217|ref|ZP_05173028.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis B2/94] gi|256030154|ref|ZP_05443768.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis M292/94/1] gi|256158333|ref|ZP_05456237.1| flagellar hook-associated protein FlgL [Brucella ceti M490/95/1] gi|256252733|ref|ZP_05458269.1| flagellar hook-associated protein FlgL [Brucella ceti B1/94] gi|260166794|ref|ZP_05753605.1| flagellar hook-associated protein FlgL [Brucella sp. F5/99] gi|261219811|ref|ZP_05934092.1| flagellar hook-associated protein FlgL [Brucella ceti B1/94] gi|261313952|ref|ZP_05953149.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis M163/99/10] gi|261318808|ref|ZP_05958005.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis B2/94] gi|261756171|ref|ZP_05999880.1| flagellar hook-associated protein [Brucella sp. F5/99] gi|265987185|ref|ZP_06099742.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis M292/94/1] gi|265996848|ref|ZP_06109405.1| flagellar hook-associated protein FlgL [Brucella ceti M490/95/1] gi|260918395|gb|EEX85048.1| flagellar hook-associated protein FlgL [Brucella ceti B1/94] gi|261298031|gb|EEY01528.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis B2/94] gi|261302978|gb|EEY06475.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis M163/99/10] gi|261736155|gb|EEY24151.1| flagellar hook-associated protein [Brucella sp. F5/99] gi|262551145|gb|EEZ07306.1| flagellar hook-associated protein FlgL [Brucella ceti M490/95/1] gi|264659382|gb|EEZ29643.1| flagellar hook-associated protein FlgL [Brucella pinnipedialis M292/94/1] Length = 348 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 95/357 (26%), Positives = 162/357 (45%), Gaps = 10/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q + + Q+ +G L A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA---GANNSGETAKTVAKSARSM 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q A Sbjct: 118 LDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFG------FAM 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V++++ +M F++ + +D WA NWS+ASD IK RI TE D S + N Sbjct: 171 DDPQVANISGDEMKAFLEGDFAEQFNDANWAANWSDASDTRIKSRISPTETADTSISANA 230 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R + AV+ TEF L A + LT + L Q ++ ++ LG+++ Sbjct: 231 DGFRKKVMSAVMVTEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGLAQSRTEA 290 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + I++ + V+ + A +++ L +IE SY +T +LQ +S+LNYL Sbjct: 291 ATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSLLNYL 347 >gi|190890384|ref|YP_001976926.1| flagellar hook-assosiated protein [Rhizobium etli CIAT 652] gi|190695663|gb|ACE89748.1| flagellar hook-assosiated protein [Rhizobium etli CIAT 652] gi|327193061|gb|EGE59973.1| flagellar hook-assosiated protein [Rhizobium etli CNPAF512] Length = 350 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 101/360 (28%), Positives = 172/360 (47%), Gaps = 13/360 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK++ IS+++I M + ++ K E TG +D G+ LG +++ +E + Sbjct: 1 MKSSFISSTAIQSAMRLTIRQAQNQMTKATMEATTGVYADIGVSLGGNAARSVDFTRETD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 I SNSLV+ R+ +SQ LS M+ + +V L L +G D + + Sbjct: 61 RIDSIKSSNSLVSARMESSQLGLSKMKDVGDGLVSKLTAL-QGSHDPGSITVAIQSATSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + AN G+YLFSGIN+ +PL T S A + NS + Sbjct: 120 LSTMMDTANTMVNGEYLFSGINTDVQPLTDKTTATSAAIVT---------ALNSYAAGLA 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA---NNWSNASDHNIKYRIKDTEGIDVSAN 237 VS + +M FI + W WS AS N+ RI ++E I+ S N Sbjct: 171 PPKAVSDLTGTEMETFITTTVEPMFSQANWTNAATGWSQASSQNMTSRISNSEVIESSTN 230 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 N G+R +V+ + L +NL+ A ++K+ +S + SG++ Q + LG+S++ Sbjct: 231 ANSEGMRYFALASVMTSALLGQNLSTDAMTTVSKQAISYTAKATSGLVTQASQLGLSQER 290 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + L ++NII + GV+ + A + TL ++E +Y I +K+Q+LS++NYL Sbjct: 291 VKKSNDALDAQSNIIKNKLVDLQGVDPYEASTLVKTLETQLETAYTIVSKIQQLSLVNYL 350 >gi|254695091|ref|ZP_05156919.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 3 str. Tulya] gi|261215442|ref|ZP_05929723.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 3 str. Tulya] gi|260917049|gb|EEX83910.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 3 str. Tulya] Length = 348 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 95/357 (26%), Positives = 163/357 (45%), Gaps = 10/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q + + Q+ +G L A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA---GANNSGETAKTVAKSARSM 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q A Sbjct: 118 LDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFG------FAM 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V++++ +M F++ + +D WA NWS+ASD IK RI TE D S + N+ Sbjct: 171 DDPQVANISGDEMKAFLEGDFAEQFNDANWAANWSDASDTRIKSRISPTETADTSISANV 230 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R + AV+ TEF L A + LT + L Q ++ ++ LG+++ Sbjct: 231 DGFRKTVMSAVMVTEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGLAQSRTEA 290 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + I++ + V+ + A +++ L +IE SY +T +LQ +S+LNYL Sbjct: 291 ATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSLLNYL 347 >gi|306845417|ref|ZP_07477991.1| flagellar hook-associated protein FlgL [Brucella sp. BO1] gi|306274160|gb|EFM55976.1| flagellar hook-associated protein FlgL [Brucella sp. BO1] Length = 348 Score = 317 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 94/357 (26%), Positives = 161/357 (45%), Gaps = 10/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q + + Q+ +G L A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA---GANNSGETAKTVAKSARSI 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q A Sbjct: 118 LDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFG------FAM 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V++++ +M F++ + +D WA NWS+ASD IK RI TE D S + N Sbjct: 171 DDPQVANISGDEMKAFLEGDFAEQFNDANWAANWSDASDTRIKSRISPTETADTSISANA 230 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R + AV+ EF L A + LT + L Q ++ ++ LG+++ Sbjct: 231 DGFRKTVMSAVMVAEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGLAQSRTEA 290 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + I++ + V+ + A +++ L +IE SY +T +LQ +S+LNYL Sbjct: 291 ATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSLLNYL 347 >gi|17988505|ref|NP_541138.1| flagellar hook-associated protein FlgL [Brucella melitensis bv. 1 str. 16M] gi|23500852|ref|NP_700292.1| flagellar hook-associated protein FlgL [Brucella suis 1330] gi|62317955|ref|YP_223808.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 1 str. 9-941] gi|83269932|ref|YP_419223.1| flagellar hook-associated protein FlgL [Brucella melitensis biovar Abortus 2308] gi|161621180|ref|YP_001595066.1| flagellar hook-associated protein FlgL [Brucella canis ATCC 23365] gi|163845455|ref|YP_001623110.1| flagellar hook-associated protein FlgL [Brucella suis ATCC 23445] gi|189023206|ref|YP_001932947.1| flagellar hook-associated protein FlgL [Brucella abortus S19] gi|225686883|ref|YP_002734855.1| flagellar hook-associated protein FlgL [Brucella melitensis ATCC 23457] gi|254691613|ref|ZP_05154867.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 6 str. 870] gi|254699260|ref|ZP_05161088.1| flagellar hook-associated protein FlgL [Brucella suis bv. 5 str. 513] gi|254711816|ref|ZP_05173627.1| flagellar hook-associated protein FlgL [Brucella ceti M644/93/1] gi|254714885|ref|ZP_05176696.1| flagellar hook-associated protein FlgL [Brucella ceti M13/05/1] gi|254731632|ref|ZP_05190210.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 4 str. 292] gi|256015896|ref|YP_003105905.1| flagellar hook-associated protein [Brucella microti CCM 4915] gi|256042864|ref|ZP_05445810.1| flagellar hook-associated protein FlgL [Brucella melitensis bv. 1 str. Rev.1] gi|256112178|ref|ZP_05453099.1| flagellar hook-associated protein FlgL [Brucella melitensis bv. 3 str. Ether] gi|256256800|ref|ZP_05462336.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 9 str. C68] gi|256261980|ref|ZP_05464512.1| flagellar hook-associated protein [Brucella melitensis bv. 2 str. 63/9] gi|260544140|ref|ZP_05819961.1| flagellar hook-associated protein [Brucella abortus NCTC 8038] gi|260564101|ref|ZP_05834586.1| flagellar hook-associated protein [Brucella melitensis bv. 1 str. 16M] gi|260568716|ref|ZP_05839185.1| flagellar hook-associated protein [Brucella suis bv. 4 str. 40] gi|260757244|ref|ZP_05869592.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 6 str. 870] gi|260759391|ref|ZP_05871739.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 4 str. 292] gi|260883048|ref|ZP_05894662.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 9 str. C68] gi|261216575|ref|ZP_05930856.1| flagellar hook-associated protein FlgL [Brucella ceti M13/05/1] gi|261319445|ref|ZP_05958642.1| flagellar hook-associated protein FlgL [Brucella ceti M644/93/1] gi|261749700|ref|ZP_05993409.1| flagellar hook-associated protein FlgL [Brucella suis bv. 5 str. 513] gi|265989299|ref|ZP_06101856.1| flagellar hook-associated protein FlgL [Brucella melitensis bv. 1 str. Rev.1] gi|265993605|ref|ZP_06106162.1| flagellar hook-associated protein FlgL [Brucella melitensis bv. 3 str. Ether] gi|294852966|ref|ZP_06793638.1| flagellar hook-associated protein 3 FlgL [Brucella sp. NVSL 07-0026] gi|297250153|ref|ZP_06933854.1| flagellar hook-associated protein 3 FlgL [Brucella abortus bv. 5 str. B3196] gi|17984297|gb|AAL53402.1| flagellar hook-associated protein 3 [Brucella melitensis bv. 1 str. 16M] gi|23464516|gb|AAN34297.1| flagellar hook-associated protein FlgL, putative [Brucella suis 1330] gi|62198148|gb|AAX76447.1| hypothetical flagellar hook-associated protein FlgL [Brucella abortus bv. 1 str. 9-941] gi|82940206|emb|CAJ13262.1| flagellar hook-associated protein FlgL, putative KO: K02397 flagellar hook-associated protein 3 FlgL [Brucella melitensis biovar Abortus 2308] gi|161337991|gb|ABX64295.1| flagellar hook-associated 3 family protein [Brucella canis ATCC 23365] gi|163676178|gb|ABY40288.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|189021780|gb|ACD74501.1| flagellar hook-associated protein [Brucella abortus S19] gi|225642988|gb|ACO02901.1| flagellar hook-associated 3 family protein [Brucella melitensis ATCC 23457] gi|255998556|gb|ACU50243.1| flagellar hook-associated protein [Brucella microti CCM 4915] gi|260097411|gb|EEW81285.1| flagellar hook-associated protein [Brucella abortus NCTC 8038] gi|260151744|gb|EEW86837.1| flagellar hook-associated protein [Brucella melitensis bv. 1 str. 16M] gi|260155381|gb|EEW90462.1| flagellar hook-associated protein [Brucella suis bv. 4 str. 40] gi|260669709|gb|EEX56649.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 4 str. 292] gi|260677352|gb|EEX64173.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 6 str. 870] gi|260872576|gb|EEX79645.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 9 str. C68] gi|260921664|gb|EEX88232.1| flagellar hook-associated protein FlgL [Brucella ceti M13/05/1] gi|261292135|gb|EEX95631.1| flagellar hook-associated protein FlgL [Brucella ceti M644/93/1] gi|261739453|gb|EEY27379.1| flagellar hook-associated protein FlgL [Brucella suis bv. 5 str. 513] gi|262764475|gb|EEZ10507.1| flagellar hook-associated protein FlgL [Brucella melitensis bv. 3 str. Ether] gi|262999968|gb|EEZ12658.1| flagellar hook-associated protein FlgL [Brucella melitensis bv. 1 str. Rev.1] gi|263091464|gb|EEZ16000.1| flagellar hook-associated protein [Brucella melitensis bv. 2 str. 63/9] gi|294818621|gb|EFG35621.1| flagellar hook-associated protein 3 FlgL [Brucella sp. NVSL 07-0026] gi|297174022|gb|EFH33386.1| flagellar hook-associated protein 3 FlgL [Brucella abortus bv. 5 str. B3196] gi|326411301|gb|ADZ68365.1| flagellar hook-associated protein FlgL [Brucella melitensis M28] gi|326554590|gb|ADZ89229.1| flagellar hook-associated protein FlgL [Brucella melitensis M5-90] Length = 348 Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 95/357 (26%), Positives = 162/357 (45%), Gaps = 10/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q + + Q+ +G L A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA---GANNSGETAKTVAKSARSM 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q A Sbjct: 118 LDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFG------FAM 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V++++ +M F++ + +D WA NWS+ASD IK RI TE D S + N Sbjct: 171 DDPQVANISGDEMKAFLEGDFAEQFNDANWAANWSDASDTRIKSRISPTETADTSISANA 230 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R + AV+ TEF L A + LT + L Q ++ ++ LG+++ Sbjct: 231 DGFRKTVMSAVMVTEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGLAQSRTEA 290 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + I++ + V+ + A +++ L +IE SY +T +LQ +S+LNYL Sbjct: 291 ATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSLLNYL 347 >gi|254720775|ref|ZP_05182586.1| flagellar hook-associated protein FlgL [Brucella sp. 83/13] gi|265985833|ref|ZP_06098568.1| flagellar hook-associated protein FlgL [Brucella sp. 83/13] gi|306840134|ref|ZP_07472919.1| flagellar hook-associated protein FlgL [Brucella sp. NF 2653] gi|264664425|gb|EEZ34686.1| flagellar hook-associated protein FlgL [Brucella sp. 83/13] gi|306404779|gb|EFM61073.1| flagellar hook-associated protein FlgL [Brucella sp. NF 2653] Length = 348 Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 94/357 (26%), Positives = 161/357 (45%), Gaps = 10/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q + + Q+ +G L A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA---GANNSGETAKTVAKSARSM 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q A Sbjct: 118 LDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFG------FAM 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V++++ +M F++ + +D WA NWS+ASD IK RI TE D S + N Sbjct: 171 DDPQVANISGDEMKAFMEGDFAEQFNDANWAANWSDASDTRIKSRISPTETADTSISANA 230 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R + AV+ EF L A + LT + L Q ++ ++ LG+++ Sbjct: 231 DGFRKTVMSAVMVAEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGLAQSRTEA 290 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + I++ + V+ + A +++ L +IE SY +T +LQ +S+LNYL Sbjct: 291 ATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSLLNYL 347 >gi|86356332|ref|YP_468224.1| flagellar hook-associated protein FlgL [Rhizobium etli CFN 42] gi|86280434|gb|ABC89497.1| flagellar hook-assosiated protein [Rhizobium etli CFN 42] Length = 350 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 103/360 (28%), Positives = 175/360 (48%), Gaps = 13/360 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK++ IS+S+I M + ++ K E TG +D G+ LG +++ +E + Sbjct: 1 MKSSFISSSAIQNAMRLTIRQAQNQMTKATMEATTGVYADIGVSLGGNAARSVDFTRETD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 I SNSLVT R+ +SQ LS M+ + +V L L +G D + + Sbjct: 61 RIDSIKSSNSLVTARMESSQLGLSKMKDVGDGLVSKLTAL-QGSHDPGSITVAIQSATSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + AN G+YLFSGIN+ +PL T S A + N+ + Sbjct: 120 LSTMMDTANTVVNGEYLFSGINTDVQPLTDKTTATSAAIVT---------ALNTYAAGLV 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA---NNWSNASDHNIKYRIKDTEGIDVSAN 237 VS + +M+ FI + + W WS AS N+ RI ++E I+ S N Sbjct: 171 PPKAVSDLTGAEMSTFITTTVEPMFSEASWTNTTTGWSQASSQNMTSRISNSEVIESSTN 230 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 N G+R + +V+ T L +NL+ A ++K+ +S + SG++ Q + LG+S++ Sbjct: 231 ANSEGMRYMALASVMTTALLGQNLSTDAMTTVSKQAISYTAKATSGLVTQASQLGLSQER 290 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + L ++NII + GV+ + A + TL ++E +Y I +K+Q+LS++NYL Sbjct: 291 VKKSNDALDAQSNIIKNKLVDLQGVDPYEASTLVKTLETQLETAYTIVSKIQQLSLVNYL 350 >gi|306841278|ref|ZP_07473989.1| flagellar hook-associated protein FlgL [Brucella sp. BO2] gi|306288680|gb|EFM60011.1| flagellar hook-associated protein FlgL [Brucella sp. BO2] Length = 348 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 94/357 (26%), Positives = 162/357 (45%), Gaps = 10/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q + + Q+ +G L A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA---GANNSGETAKTVAKSARSM 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q A Sbjct: 118 LDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFG------FAM 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V++++ +M F++ + +D WA NWS+ASD IK RI TE D S + N Sbjct: 171 DDPQVANISGDEMKAFMEGDFAEQFNDANWAANWSDASDTRIKSRISPTETADTSISANA 230 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R + AV+ EF L A + LT ++L Q ++ ++ LG+++ Sbjct: 231 DGFRKTVMSAVMVAEFADIGLNASAFDALTTQVLQITTQAVTETTSEQTTLGLAQSRTEA 290 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + I++ + V+ + A +++ L +IE SY +T +LQ +S+LNYL Sbjct: 291 ATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSLLNYL 347 >gi|325291964|ref|YP_004277828.1| flagellar hook-associated protein FlgL [Agrobacterium sp. H13-3] gi|325059817|gb|ADY63508.1| flagellar hook-associated protein FlgL [Agrobacterium sp. H13-3] Length = 367 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 97/374 (25%), Positives = 187/374 (50%), Gaps = 24/374 (6%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKT+ IS+ ++ M + + L+ E+ TG+ +D G+ LGA L+ ++ + Sbjct: 1 MKTSFISSLAMQNSMRSTILKAQLEMTNLNTELTTGKHADLGVTLGANTARSLDLNRDVD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ + NS+ T+RL +SQA L M K Q++ LV + A + ++ Sbjct: 61 RLSSLVSVNSIATQRLKSSQAALDGMAKAAQEIQKVLV--PNTSSAAPTLATVAKTISNA 118 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + +F FAN G++LFSGIN+ KP++ YF + S K +++ L F+ + ++ Sbjct: 119 FNTFTGFANTAVSGEFLFSGINTDVKPIDDYFAEGSTLKAAYEVELNAFMAAQTPAVGN- 177 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDE-----------------YWANNWSNASDHNIK 223 ++ ++ Q F+ ++E F+ +W S ASD N+ Sbjct: 178 ----IADLSKDQAAAFMTRIEGVFNGTTPVTNPPHSDLTAGQNYDFWTTYGSKASDTNMT 233 Query: 224 YRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSG 283 RI E ++ S N N +G+R A+ FL + R ++ + ++ + +SG Sbjct: 234 SRISQNEVVETSTNSNSQGMRYFAMTAMTAMTFLDDKVPSDVRELVATRSVTNIGTVISG 293 Query: 284 IIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYM 343 + +Q++ LG+SE +++ L + II+T++ G++ + +L L +IE++Y Sbjct: 294 LNQQQSQLGLSESRVSKANDSLAAQKKIIETHLLDIEGIDTYEVKTRLDLLQQQIEIAYS 353 Query: 344 ITTKLQKLSILNYL 357 +T++LQK+S++NYL Sbjct: 354 LTSRLQKMSLVNYL 367 >gi|254702381|ref|ZP_05164209.1| flagellar hook-associated protein FlgL [Brucella suis bv. 3 str. 686] gi|261752944|ref|ZP_05996653.1| flagellar hook-associated protein FlgL [Brucella suis bv. 3 str. 686] gi|261742697|gb|EEY30623.1| flagellar hook-associated protein FlgL [Brucella suis bv. 3 str. 686] Length = 348 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 95/357 (26%), Positives = 162/357 (45%), Gaps = 10/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q + + Q+ +G L A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA---GANNSGETTKTVAKSARSM 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q A Sbjct: 118 LDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFG------FAM 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V++++ +M F++ + +D WA NWS+ASD IK RI TE D S + N Sbjct: 171 DDPQVANISGDEMKAFLEGDFAEQFNDANWAANWSDASDTRIKSRISPTETADTSISANA 230 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R + AV+ TEF L A + LT + L Q ++ ++ LG+++ Sbjct: 231 DGFRKTVMSAVMVTEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGLAQSRTEA 290 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + I++ + V+ + A +++ L +IE SY +T +LQ +S+LNYL Sbjct: 291 ATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSLLNYL 347 >gi|319403980|emb|CBI77568.1| putative flagellar hook-associated protein 3 (HAP3) [Bartonella rochalimae ATCC BAA-1498] Length = 360 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 88/368 (23%), Positives = 165/368 (44%), Gaps = 20/368 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ IST + L E D +K EM TGQ D GL LG + +++ E + + Sbjct: 1 MRVPSISTYVLNNARRNLISEGKSDLMKAGYEMATGQVYDPGLTLGRKTGRLMDIENQMS 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQ--DMVGPLVI---LLEGKTDNNKFPINAG 115 ++ SN L++ RLS+ QA + S+ G LV+ +L G N Sbjct: 61 YLEGYSTSNKLLSLRLSSVQAAIQSLIASGDKESTPGSLVVFNNMLVGDAGNAAPSAAQA 120 Query: 116 MLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSK 175 + +++ +F++ N G+Y+F G N+SE PL Y K + + E + Sbjct: 121 VAQNALSAFISALNTNFNGEYIFGGTNTSEPPLKFY-------KVCGETGPSKIVHEAFE 173 Query: 176 SLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIK-DTEGIDV 234 + L G+ E + +++M +FI ++E + +SNA D + + I + + +DV Sbjct: 174 NFLNGRKPE--DLTSEEMEEFIDGPFSDLFNEENFKEFFSNAKDGSTEKHIAPNGDKVDV 231 Query: 235 SANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKML-----STVQQGLSGIIEQRA 289 + + N +G RD M ++ EF L+ A+ L + ++ + I + Sbjct: 232 AVSANDKGFRDAMKNLILVAEFGDIGLSKEAQESLFSRARVSADNTSTSSVVDEITATAS 291 Query: 290 VLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQ 349 +G +E + ++ + ++ IGV+ ++ L +E SY +T ++ Sbjct: 292 RVGSTETRVKAATHQIETQVGLLKGAQIDMIGVDAAEVAQKVKALEAMLEASYTLTDMIR 351 Query: 350 KLSILNYL 357 +LS++NYL Sbjct: 352 RLSLINYL 359 >gi|260466601|ref|ZP_05812789.1| flagellar hook-associated 3 family protein [Mesorhizobium opportunistum WSM2075] gi|259029607|gb|EEW30895.1| flagellar hook-associated 3 family protein [Mesorhizobium opportunistum WSM2075] Length = 347 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 91/354 (25%), Positives = 166/354 (46%), Gaps = 9/354 (2%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T +S++++ + D VK +E TG+ +D GL LG R + + ++ + + Sbjct: 2 TSVSSAALSNAARYQQMRMQADLVKATKESSTGRIADVGLALGGRTAQSVTFSRDLDRLN 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + SN LV RLS++Q L + + Q + L G + + + + + Sbjct: 62 VIVDSNGLVAARLSSTQTSLGQLSSVAQTFLSSLTTASSGDNSD---SLTQSTGQTTIQQ 118 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + N + G+YLF+G N+ KP+N + S AK +FD LA Sbjct: 119 LASILNTSVNGEYLFAGTNTDVKPINDFTAPGSPAKAAFDASFVANFGFPPNDPLA---- 174 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 +++ A QM DFI + W N SNA+D I RI E + S N GI Sbjct: 175 --ANITAAQMDDFITNDVEPQFLGSGWQTNMSNATDQQIVSRIALNETTETSTGANSDGI 232 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + + A + + +S N++ A++ + + V + LSGI + ++ GI +K +++ Sbjct: 233 KKLAMAAAMVSSLMSTNISQAAKDTIVSRSQILVGEALSGIAQVQSETGIVQKRVSDASD 292 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + ++ + +I V+ A +++ L IE S+ +T +LQ+LS+LNYL Sbjct: 293 RMKTQVDLFERHILDLEAVDPAEAATRVADLTQHIETSFALTARLQQLSLLNYL 346 >gi|10998530|gb|AAG25960.1|AF300968_2 FlgL [Sinorhizobium meliloti] Length = 345 Score = 313 bits (801), Expect = 4e-83, Method: Composition-based stats. Identities = 107/357 (29%), Positives = 192/357 (53%), Gaps = 12/357 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKT+ +S ++ M + ++ + +KL E+ TG+ +D GL LG+ + ++E Sbjct: 1 MKTSFVSNLAVQNAMRLTIQQGQAELLKLQTEVTTGRHADVGLALGSSAARSVSLQRELA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +NS+VT+RL+ SQ+ LS+M + Q + LV +G ++ I ++ + Sbjct: 61 RLGTLVDTNSVVTQRLAASQSALSAMAEAAQQVRNTLVTF-KGNDAADQLAIQKTEIQSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +F + AN++ G++LF+GIN+ +PL Y ++ AK +FD L F+ N + Sbjct: 120 MSAFSSAANLSFNGEFLFAGINTDVRPLEDY---NAAAKSTFDTALATFMSANGIA---- 172 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +S QM DFI + D E WA +WS AS N+ RI TE + S N Sbjct: 173 ---SMSDFTKAQMEDFITNTLEPLYDTE-WAADWSKASSQNMTSRISTTEVVQSSTNATT 228 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R +VI E + +N++ R + + L V+Q + I +R+ LGISE + + Sbjct: 229 EGFRKFALASVIALELMDENVSSEVRAYIGEAALGYVEQANTQITAERSTLGISEARVKK 288 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 LQ + +I+T+I+ GV+ + A +++TL+ ++E SY +T ++Q+LS++++L Sbjct: 289 ANTSLQAQIKLINTHITDLEGVDTYEASTRMNTLLTQVETSYTLTARIQRLSLIDFL 345 >gi|319781663|ref|YP_004141139.1| flagellar hook-associated protein FlgL [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167551|gb|ADV11089.1| flagellar hook-associated protein FlgL [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 347 Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats. Identities = 92/354 (25%), Positives = 167/354 (47%), Gaps = 9/354 (2%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T +S+++I M + + VK +E TG+ +D GL LG R T + ++++ + + Sbjct: 2 TSVSSAAISNAMRSQQMRMQAELVKATKESSTGRVADVGLALGGRTTQAVTFQRDLDRLN 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + SN LV RLS++Q L + Q + L + ++ + + + + Sbjct: 62 VIIDSNGLVGARLSSTQTSLGQLSTAAQTFLSALT---TASSSDSSNSLTQSSGKATIQQ 118 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + N + G+YLF+G N+ KP+N + S AK +FD Sbjct: 119 LTSILNTSVNGEYLFAGTNTDVKPINDFTAAGSPAKAAFDAAFVANFG------FTQDDP 172 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + + A QM DFI W NWSNA+D I RI E S + N GI Sbjct: 173 LAADITAAQMDDFITNDVAPQFTGAGWQGNWSNATDQQIVSRIALNETTPTSTSANSAGI 232 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + + A + + +S N++ A+N + + + V + LSGI + ++ GI +K +++ Sbjct: 233 QKLAMAAAMVSSLMSSNISQAAKNTVVSRSTTLVGEALSGIGQLQSETGIVQKRVSDAND 292 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + ++ + +I V+ A +++ L IE S+ +T +LQ+LS+LNYL Sbjct: 293 RMKTQVDLFERHILDLEAVDPAEAATRVADLTQHIETSFALTARLQQLSLLNYL 346 >gi|319405423|emb|CBI79042.1| putative flagellar hook-associated protein 3 (HAP3) [Bartonella sp. AR 15-3] Length = 360 Score = 312 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 89/368 (24%), Positives = 169/368 (45%), Gaps = 20/368 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ + IST + + E D +K EM TGQ D GL+LG + +++ E + + Sbjct: 1 MRVSSISTYVLNNARRNIISEGQSDLMKAGYEMATGQVYDPGLELGRKTGRLMDIENQMS 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQ--DMVGPLVI---LLEGKTDNNKFPINAG 115 ++ SN L++ RLS+ Q + S+ G L I +L G N + Sbjct: 61 YLEGYSTSNKLLSLRLSSVQVAIQSLIASGDKEATPGALTIFNNMLVGDAGNATPSVAQS 120 Query: 116 MLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSK 175 + ++S +F++ N G+Y+F GIN+SE PL Y K + ++E + Sbjct: 121 VAQNSLGAFISALNTNFNGEYVFGGINTSEPPLKFY-------KVGGETGPSKIVQETFE 173 Query: 176 SLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIK-DTEGIDV 234 + L G+ LE + +++M +FI ++E + +SNA +I+ I + + +D Sbjct: 174 NFLNGRKLE--DLTSEEMEEFIDGPFSDLFNEENFKEFFSNAQGGSIEKHIAPNGDKVDA 231 Query: 235 SANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKML-----STVQQGLSGIIEQRA 289 + + N +G RD M ++ EF L+ A+ L + ++ + II + Sbjct: 232 AVSANEQGFRDAMKNLILVAEFGDIGLSKEAQESLFSRARVSADDTSTSSAVDKIIATAS 291 Query: 290 VLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQ 349 +G +E + ++ + ++ IGV+ ++ L +E SY +T ++ Sbjct: 292 KVGSTEARVKAATQQIETQVGLLKGAKINMIGVDAAEVAQKVKALEAMLEASYTLTDMIR 351 Query: 350 KLSILNYL 357 +LS++NYL Sbjct: 352 RLSLINYL 359 >gi|15964434|ref|NP_384787.1| flagellar hook-associated protein FlgL [Sinorhizobium meliloti 1021] gi|307311576|ref|ZP_07591217.1| flagellar hook-associated 3 family protein [Sinorhizobium meliloti BL225C] gi|15073611|emb|CAC45253.1| Putative flagellar hook-associated protein [Sinorhizobium meliloti 1021] gi|306899593|gb|EFN30222.1| flagellar hook-associated 3 family protein [Sinorhizobium meliloti BL225C] Length = 345 Score = 312 bits (798), Expect = 8e-83, Method: Composition-based stats. Identities = 106/357 (29%), Positives = 191/357 (53%), Gaps = 12/357 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKT+ +S ++ M + ++ + +KL E+ TG+ +D GL LG+ + ++E Sbjct: 1 MKTSFVSNLAVQNAMRLTIQQGQAELLKLQTEVTTGRHADVGLALGSSAARSVSLQRELA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +NS+VT+RL+ SQ+ LS+M + Q + LV +G ++ I ++ + Sbjct: 61 RLGTLVDTNSVVTQRLAASQSALSAMAEAAQQVRNTLVTF-KGNDAADQLAIQKTEIQSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +F + AN++ G++LF+GIN+ +PL Y ++ AK +FD L ++ N Sbjct: 120 MSAFSSAANLSFNGEFLFAGINTDVRPLEDY---NAAAKSTFDTALATYMSAN------- 169 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +S QM DFI + D E WA +WS AS N+ RI TE + S N Sbjct: 170 GITSMSDFTKAQMEDFITNTLEPLYDTE-WAADWSKASSQNMTSRISTTEVVQSSTNATT 228 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R +VI E + +N++ R + + L V+Q + I +R+ LGISE + + Sbjct: 229 EGFRKFALASVIALELMDENVSSEVRAYIGEAALGYVEQANTQITAERSTLGISEARVKK 288 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 LQ + +I+T+I+ GV+ + A +++TL+ ++E SY +T ++Q+LS++++L Sbjct: 289 ANTSLQAQIKLINTHITDLEGVDTYEASTRMNTLLTQVETSYTLTARIQRLSLIDFL 345 >gi|153011506|ref|YP_001372720.1| flagellar hook-associated protein FlgL [Ochrobactrum anthropi ATCC 49188] gi|151563394|gb|ABS16891.1| flagellar hook-associated 3 family protein [Ochrobactrum anthropi ATCC 49188] Length = 348 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 91/357 (25%), Positives = 162/357 (45%), Gaps = 10/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + +K +E TG D GL LG++ + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMLKAQQEATTGTVFDVGLSLGSKSGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q ++ + Q+ +G L + A + Sbjct: 61 RLSVLTDMNKLVQQRMNATQTAAGTIIENTQNFLGDLTGANNTAESASTI---AKSAKSI 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 S N + G+Y+F+G+N+ KP+ Y T+ S A+ + Q Q A Sbjct: 118 LNSVTGLLNTSYNGEYIFAGVNTDVKPVADY-TEGSAAQTAVRQAFQTHFG------FAI 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V+++ +M F++ +D WA NWS+ASD IK RI TE D S + N Sbjct: 171 DDPQVANITGDEMKAFLEGDFADEFNDANWAANWSDASDTVIKSRISPTETADTSISANA 230 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R + AV+ EF + L + A LT + + T ++ ++ LG+++ Sbjct: 231 DGFRKTIMSAVMVAEFATIGLNNSAFEALTHQAMQTTTTAITETTSEQTTLGLAQSRTEA 290 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + I++ + V+ + A +++ L +IE SY +T +LQ +S+LNYL Sbjct: 291 ATTRIAAQQKILNQSVLNLEEVDPYEAATRVNALKTQIETSYSLTVQLQNMSLLNYL 347 >gi|239834425|ref|ZP_04682753.1| flagellar hook-associated protein FlgL [Ochrobactrum intermedium LMG 3301] gi|239822488|gb|EEQ94057.1| flagellar hook-associated protein FlgL [Ochrobactrum intermedium LMG 3301] Length = 351 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 92/357 (25%), Positives = 161/357 (45%), Gaps = 10/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + + + + +K +E TG D GL LG++ + +E + Sbjct: 4 MKAQSISTYGATSALRAMVAKNKAEMLKAQQEATTGTVFDVGLSLGSKSGQTVSLRKEYD 63 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q ++ + Q+ +G L A + Sbjct: 64 RLSVLTDMNKLVQQRMNATQTAAGTIIENTQNFLGDLT---GANNTAESAATIAKSAKSI 120 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 S N + G+Y+F+G+N+ KP+ Y T+ S A+ + Q Q A Sbjct: 121 LNSVTGLLNTSYNGEYIFAGVNTDVKPVADY-TEGSAAQTAVRQAFQNHFG------FAI 173 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V+++ +MT F+ + +D WA NWS+ASD IK RI TE D S + N Sbjct: 174 DDPQVANITGDEMTAFLDGDFAEEFNDANWAANWSDASDTVIKSRISPTETADTSISANA 233 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R + AV+ EF + L A LT K + T ++ ++ LG+++ Sbjct: 234 DGFRRTIMSAVMVAEFATIGLNSQAFEALTGKAMQTTTTAITETTSEQTTLGLAQSRTQA 293 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + I++ + V+ + A +++ L +IE SY +T +LQ +S+LNYL Sbjct: 294 ATTRIVAQQKILNQSVLNLEEVDPYEAATRVNALKTQIETSYSLTVQLQNMSLLNYL 350 >gi|307318931|ref|ZP_07598362.1| flagellar hook-associated 3 family protein [Sinorhizobium meliloti AK83] gi|306895345|gb|EFN26100.1| flagellar hook-associated 3 family protein [Sinorhizobium meliloti AK83] Length = 347 Score = 310 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 104/358 (29%), Positives = 193/358 (53%), Gaps = 12/358 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKT+ +S ++ M + ++ + +KL E+ TG+ +D GL LG+ + ++E Sbjct: 1 MKTSFVSNLAVQNAMRLTIQQGQAELLKLQTEVTTGRHADVGLALGSSAARSVSLQRELA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +NS+VT+RL+ SQ+ LS+M + Q + LV +G ++ I ++ + Sbjct: 61 RLGTLVDTNSVVTQRLAASQSALSAMAEAAQQVRNTLVTF-KGNDAADQLAIQKTEIQSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +F + AN++ G++LF+GIN+ +P + Y ++ AK +FD L ++ N + Sbjct: 120 MSAFSSAANLSFNGEFLFAGINTDVRPFDDY---NAAAKSTFDTALATYMSANGIA---- 172 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKF-SDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 +S +M DFI + + D WA +WS AS N+ RI TE + S N Sbjct: 173 ---SMSDFTKAEMEDFITNTLEPLYASDAQWAADWSKASSQNMTSRISTTEVVQSSTNAT 229 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 G R +VI E + +N++ R + + LS V+Q + I +R+ LGISE + Sbjct: 230 TEGFRKFALASVIALELMDENVSSEVRAYIGEAALSYVEQANTQITAERSTLGISEARVK 289 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + LQ + +I+T+I+ GV+ + A +++TL+ ++E SY +T ++Q+LS++++L Sbjct: 290 KANTSLQAQIKLINTHITDLEGVDTYEASTRMNTLLTQVETSYTLTARIQRLSLIDFL 347 >gi|319406996|emb|CBI80633.1| putative flagellar hook-associated protein 3 (HAP3) [Bartonella sp. 1-1C] Length = 360 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 88/368 (23%), Positives = 166/368 (45%), Gaps = 20/368 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ IST + + E D +K EM TGQ D GL LG + +++ E + + Sbjct: 1 MRVPSISTYVLNNAQRNIISEGKFDLMKAGYEMATGQVYDPGLTLGRKTGRLMDIENQMS 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQ--DMVGPLVI---LLEGKTDNNKFPINAG 115 ++ SN L++ RLS+ QA + S+ G LV+ +L G N Sbjct: 61 YLEGYSTSNKLLSLRLSSVQAAIQSLIASGDKESTPGALVVFNNMLVGDAGNATPSATQA 120 Query: 116 MLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSK 175 + +++ +F++ N G+Y+F G N+SE PL Y K + + E + Sbjct: 121 VAQNALSAFISALNTNFNGEYIFGGTNTSEPPLKFY-------KVGGETGPSKIVHEAFE 173 Query: 176 SLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIK-DTEGIDV 234 S L G+ E + +++M +FI ++E + +SNA D + + I + + +DV Sbjct: 174 SFLNGRKPE--DLTSEEMEEFIDGPFSDLFNEENFKEFFSNAKDGSTEKHIAPNGDKVDV 231 Query: 235 SANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKML-----STVQQGLSGIIEQRA 289 + + + +G RD M ++ EF L+ A+ L + ++ + II + Sbjct: 232 AVSASDKGFRDAMKNLILVAEFGDVGLSKEAQESLFSRARVSADNTSTSSVVDEIIATAS 291 Query: 290 VLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQ 349 +G +E + ++ + ++ IGV+ ++ L +E SY +T ++ Sbjct: 292 RVGSAETRVKAATHQIETQVGLLKGAQIDMIGVDAADVAQKVKALEAMLEASYTLTDMIR 351 Query: 350 KLSILNYL 357 +LS++NYL Sbjct: 352 RLSLVNYL 359 >gi|150395505|ref|YP_001325972.1| flagellar hook-associated protein FlgL [Sinorhizobium medicae WSM419] gi|150027020|gb|ABR59137.1| flagellar hook-associated 3 family protein [Sinorhizobium medicae WSM419] Length = 350 Score = 306 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 106/358 (29%), Positives = 193/358 (53%), Gaps = 9/358 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKT+ +S ++ M + ++ + +KL E+ TG+ +D GL LG+ + ++E Sbjct: 1 MKTSFVSNLAVQNAMRLTIQQGQAELLKLQTEVTTGRHADVGLALGSSTARSVSLQRELA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +NS+VT+RL+ SQ+ L++M + Q + LV +G ++ I ++ + Sbjct: 61 RLGTLVDTNSVVTQRLAASQSALAAMAEAAQQVRNTLVTF-KGNDAADQLAIQNTEIQSA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +F + AN++ G++LF+GIN+ +P N Y S AK +FD L ++ N + Sbjct: 120 ISAFSSAANLSFNGEFLFAGINTDVRPFNDYSAAGSTAKTTFDNALATYMSANGIA---- 175 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKF-SDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 +S QM DFI + + D WA +WS+AS N+ RI TE + SAN Sbjct: 176 ---SMSDFTKAQMEDFITNTLEPLYASDAQWAADWSDASSQNMTSRISTTEVVQSSANAT 232 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 G R +VI E + +N++ R + + L V+Q + I +R+ LGISE + Sbjct: 233 TEGFRKFALASVIALELMDENVSSEVRAYIGEAALGYVEQANTQITAERSTLGISEARVK 292 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + LQ + +I T+I+ GV+ + A +++TL+ ++E SY +T+++Q+LS++++L Sbjct: 293 KANTSLQAQIKLIKTHITDLEGVDTYEASTRMNTLLTQVETSYTLTSRIQRLSLIDFL 350 >gi|319409167|emb|CBI82811.1| putative flagellar hook-associated protein 3 (HAP3) [Bartonella schoenbuchensis R1] Length = 360 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 87/369 (23%), Positives = 165/369 (44%), Gaps = 22/369 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ +ST + + + ++ E TG+ D GL LG R ++ E + + Sbjct: 1 MRVPSVSTYVLSNARRDVIANGQSELMQASYEATTGKLYDPGLTLGRRTGRLVNIESQMS 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVI-----LLEGKTDNNKFPINAG 115 ++ ++N L R+S+ QA + S+ + P + +L G + + Sbjct: 61 YLEGFSNTNKLTMLRMSSMQAAIHSLVSSGDEAAAPGALTLFNNMLVGDPGSAAPSVIQA 120 Query: 116 MLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKD-SLAKKSFDQMLQGFLEENS 174 + +DS +F++ N G+Y+F G N+SE+PLN Y + K FL Sbjct: 121 VAQDSLSAFISALNTNYNGEYVFGGTNTSEQPLNFYTVGGETGPSKVVRDTFDEFLG--- 177 Query: 175 KSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRI-KDTEGID 233 + + +++M +FI D+E + +SNA D +I+ RI + E ++ Sbjct: 178 -------GRKPEDLTSEEMEEFIDGPFSSLFDEENFTQIFSNAQDGSIEKRILSNGETVN 230 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQ-----GLSGIIEQR 288 V+A+ N +G RD M V+ EF L+ A+ L K ++ Q S II Sbjct: 231 VAASANEKGFRDAMKSMVLVAEFGDIGLSKDAQEGLYSKARTSNDQTSTSSSTSEIIAIA 290 Query: 289 AVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKL 348 + +G +E + ++ + +++ IGV+ A ++ L + +SY +T ++ Sbjct: 291 SRIGSAEARVKTATQRIEIQKDLLMKAKIDLIGVDSTEAVQKVQALEAMLNLSYTLTGRI 350 Query: 349 QKLSILNYL 357 +LS++NYL Sbjct: 351 SQLSLVNYL 359 >gi|319898658|ref|YP_004158751.1| flagellar hook-associated protein 3 (HAP3) [Bartonella clarridgeiae 73] gi|319402622|emb|CBI76167.1| putative flagellar hook-associated protein 3 (HAP3) [Bartonella clarridgeiae 73] Length = 360 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 85/368 (23%), Positives = 166/368 (45%), Gaps = 20/368 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ + IST + + E D +K EM TGQ D GL LG + +++ E + + Sbjct: 1 MRVSSISTYVLNNARRNIISEGQSDLMKAAYEMATGQVYDPGLALGRKTARLIDVENQMS 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSM--QKIVQDMVGPLVI---LLEGKTDNNKFPINAG 115 ++ S+ L+T RLS+ Q + ++ + G L I +L G N Sbjct: 61 YLEGYSTSDKLLTLRLSSVQVAIQTLIASDDKEAAPGALTIFNNMLVGDAGNATPSAAQA 120 Query: 116 MLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSK 175 + +++ +F++ N G+Y+F G N+SE PL Y K + ++E + Sbjct: 121 VAQNALGAFISALNTNFNGEYIFGGTNTSEPPLKFY-------KVGGETGPSKIVQETFE 173 Query: 176 SLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIK-DTEGIDV 234 + L G+ LE + +++M +FI ++E + +SNA D +I+ I + + +D Sbjct: 174 NFLNGRKLE--DLTSEEMEEFIDGPFSDLFNEENFKEFFSNAQDGSIEKHIAPNGDKVDA 231 Query: 235 SANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKML-----STVQQGLSGIIEQRA 289 + + N +G R M ++ EF L+ A+ L + ++ + II + Sbjct: 232 AVSANDKGFRYAMKNLILVAEFGDIGLSKEAQESLFSRARASADNTSTSSAVDEIIATAS 291 Query: 290 VLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQ 349 +G +E + ++ + ++ I V+ ++ L +E SY +T ++ Sbjct: 292 RVGSTEARVKAATQQIEIQVGLLRRAQINMIAVDAAEVAQKVKALETMLEASYTLTDMIR 351 Query: 350 KLSILNYL 357 +LS++NYL Sbjct: 352 RLSLINYL 359 >gi|13472594|ref|NP_104161.1| flagellar hook-associated protein FlgL [Mesorhizobium loti MAFF303099] gi|14023340|dbj|BAB49947.1| flagellar hook-associated protein 3 (HAP3); FlgL [Mesorhizobium loti MAFF303099] Length = 347 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 93/354 (26%), Positives = 166/354 (46%), Gaps = 9/354 (2%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T +S++++ M + D VK +E TG+ +D GL LG R + + ++ + + Sbjct: 2 TSVSSAALTNAMRYQQMRMQADLVKATKESSTGRVADVGLALGGRTAQSVTFSRDLDRLN 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + SN LVT RL+++Q L + + Q + L G N + + + Sbjct: 62 VIVDSNGLVTARLASTQTSLGQLSGVAQTFLSALTTASSGDNSN---SLTQSTGLTTLQQ 118 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + N + G+YLF+G N+ KP+N + S AK +FD Sbjct: 119 LTSILNTSVNGEYLFAGTNTDVKPINDFTAAGSAAKAAFDASFVAKFG------FTPTDP 172 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 +++ A QM DFI W N SNA+D I RI E + S + N GI Sbjct: 173 AAANITAAQMDDFITNDVAPQFLGAGWQTNMSNATDQQIVSRIALNETTETSTSANSDGI 232 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 R + A + + +S N++ A++ + + V + LSGI + ++ GI +K +++ Sbjct: 233 RKLAMAAAMVSSLMSSNISRAAKDSIVTHSQTLVGEALSGIAQVQSETGIVQKRVSDASD 292 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + ++ + +I V+ TA +++ L IE S+ +T +LQ+LS+LNYL Sbjct: 293 RMKTQIDLFERHILDLEAVDPATAATRVADLTQHIETSFALTARLQQLSLLNYL 346 >gi|90422626|ref|YP_530996.1| flagellar hook-associated protein FlgL [Rhodopseudomonas palustris BisB18] gi|90104640|gb|ABD86677.1| putative flagellar hook-associated protein [Rhodopseudomonas palustris BisB18] Length = 347 Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats. Identities = 89/357 (24%), Positives = 160/357 (44%), Gaps = 10/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M TT IST+SI + I + + +E TG+++D GL LGA + E Sbjct: 1 MATTFISTNSISTTLRISAMKSQAALSRATKEATTGRNADVGLSLGALAGRDVVLRAELL 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ + + +N LV RL T+Q + + + L+ + I A + Sbjct: 61 NVDKLVDTNGLVGGRLDTAQQRVDELIDTAKSFQKDLLA---ARNSAGGGTIIAQSASAN 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + ++ N+T +GQYLF GIN++ +P+ Y S +K + D A Sbjct: 118 LQGLISTLNVTMDGQYLFGGINTATRPILDY-AAGSASKTAVDAAFSATFG------FAQ 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 VS + A M F+ DD W NWS A+D ++ RI T+ ID SA+ N Sbjct: 171 NSPLVSGITAADMQSFLDTTFQAQFDDPAWGTNWSTATDQVMRSRISTTQTIDSSASANE 230 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 R + + ++ + L A + + + + ++ + A +G +++ Sbjct: 231 PAFRKLAKAYTMLSDLGTSGLNQSAFQTVIDAAIEDIGEAINDLAGVGAKIGTAQEQTTG 290 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L+ + ++I I+ V+ A +++ L +++EMS +T ++Q+LSILNYL Sbjct: 291 ATERLKVQGDLITQQINAMEQVDPTEASVRVTNLKSQLEMSLALTARIQQLSILNYL 347 >gi|121602544|ref|YP_989381.1| flagellar hook-associated protein FlgL [Bartonella bacilliformis KC583] gi|120614721|gb|ABM45322.1| putative flagellar hook-associated protein 3 (HAP3) [Bartonella bacilliformis KC583] Length = 360 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 90/369 (24%), Positives = 164/369 (44%), Gaps = 22/369 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ IST + + + ++ E+VTGQ D GL LG + +++ + + N Sbjct: 1 MRIQSISTYVLNNSQRDTIAKGQSELMQAAYELVTGQLYDPGLTLGRKTGRLVDIQNQMN 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQD-----MVGPLVILLEGKTDNNKFPINAG 115 + ++N L R+S++QA + S+ D + +L G N Sbjct: 61 FLEGFSNTNKLALSRMSSAQAAIQSLIAAGDDETAPGALTLFNNMLVGDAANQTPSAAQA 120 Query: 116 MLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKD-SLAKKSFDQMLQGFLEENS 174 + ++ SF++ N + G Y+F G N+++ PLN Y S K FL Sbjct: 121 VAENALASFISALNTSYNGDYIFGGTNTTQPPLNAYKVGGESGPSKVVHDAFTTFL---- 176 Query: 175 KSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRI-KDTEGID 233 + A+ M FI ++ D+E ++ +SNA D +I+ RI + E ++ Sbjct: 177 ------DGRNPEDLTAEDMDKFIDEVFSTLFDEENFSKIFSNAKDGSIEKRIGPNGETVN 230 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKML-----STVQQGLSGIIEQR 288 V+A+ N +G RD M ++ EF L+ A+ L K ++ ++ II Sbjct: 231 VAASANEKGFRDAMKNMILVAEFGDIGLSKEAQEALFAKARNSSDQTSTTTAINEIIATA 290 Query: 289 AVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKL 348 + LG +E I ++ + N++ IGV+ A +L L + +SY +T ++ Sbjct: 291 SRLGSTEARIKGATKQIEIQTNLLKGQQIDMIGVDSTEAGQRLKALEAMLNLSYTLTARI 350 Query: 349 QKLSILNYL 357 +LS++NYL Sbjct: 351 SQLSLVNYL 359 >gi|218462423|ref|ZP_03502514.1| flagellar hook-associated protein FlgL [Rhizobium etli Kim 5] Length = 332 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 95/342 (27%), Positives = 160/342 (46%), Gaps = 13/342 (3%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 ++ K E TG +D G+ LG +++ +E + I SNSLV+ R+ + Sbjct: 1 IRQAQNQMTKATMEATTGVYADIGVSLGGNAARSVDFTRETDRIDSIKASNSLVSARMES 60 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 SQ LS M+ + +V L L +G D + + + + AN G+YLF Sbjct: 61 SQLGLSKMKDVGDGLVSKLTAL-QGSKDPGSITVAIQSATSALSTMMDTANTMVNGEYLF 119 Query: 139 SGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 SGIN+ +PL T S A + NS + VS + +M FI Sbjct: 120 SGINTDVQPLTDKTTATSAAIVT---------ALNSYAAALVPPKAVSDLTGAEMQTFIT 170 Query: 199 QLEDKFSDDEYWA---NNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTE 255 + W WS AS N+ RI ++E I+ S N N G+R +V+ + Sbjct: 171 TTVEPMFSQANWTNAATGWSQASSQNMTSRISNSEVIESSTNANSEGMRYFALASVMTSA 230 Query: 256 FLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 L +NL+ A ++K+ +S + SG++ Q + LG+S++ + + L ++NII Sbjct: 231 LLGQNLSTDAMTTVSKQAISYTAKATSGLVTQASQLGLSQERVKKSNDALDAQSNIIKNK 290 Query: 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + GV+ + A + TL ++E +Y I +K+Q+LS++NYL Sbjct: 291 LVDLQGVDPYEASTLVKTLETQLETAYTIVSKIQQLSLVNYL 332 >gi|115523195|ref|YP_780106.1| flagellar hook-associated protein FlgL [Rhodopseudomonas palustris BisA53] gi|115517142|gb|ABJ05126.1| flagellar hook-associated 3 family protein [Rhodopseudomonas palustris BisA53] Length = 347 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 88/357 (24%), Positives = 159/357 (44%), Gaps = 10/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M TT IS+++I + + + +E TG+ +D GL LGA + E Sbjct: 1 MATTFISSNAITTTLRNAAMKSQVAVSRATKEATTGRLADVGLSLGALAGRDVVLRAELL 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + +N LV+ RL T+Q + + + + L+ + N + A + Sbjct: 61 DVDKLVDTNGLVSGRLDTAQQRVGELIETAEAFQKDLLA---ARNSANGGNVIAQSAGAN 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S + N+ GQYLF G N+ KP+ Y S +K + D + + S Sbjct: 118 LQSLIATLNVAMNGQYLFGGTNTGVKPMVEY-AAGSTSKTAIDTTFASYFGFSQAS---- 172 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 VS + A M F+ D W NWS A D ++ RI T+ ID S + N Sbjct: 173 --PSVSGITAANMQTFLTTDLQTEFADPAWGTNWSTALDQPMRSRISTTQTIDSSVSANE 230 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R + + + + +L A V+ ++ V + ++ + A LG +++ + Sbjct: 231 PGFRKLAKAYTMLNDLGTGSLNQTAFQVVIDTAITAVGEAINDLAGVGARLGTAQQQTTD 290 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L+ + ++I I+ V+ A +++TL N++EMS +T ++Q++SIL YL Sbjct: 291 AISRLKVQGDLITEQITAMEKVDPTEASVRVTTLNNQLEMSLALTARIQQMSILKYL 347 >gi|170748123|ref|YP_001754383.1| flagellar hook-associated protein FlgL [Methylobacterium radiotolerans JCM 2831] gi|170654645|gb|ACB23700.1| flagellar hook-associated 3 family protein [Methylobacterium radiotolerans JCM 2831] Length = 351 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 83/359 (23%), Positives = 158/359 (44%), Gaps = 10/359 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVT-GQSSDYGLQLGARVTSILEWEQEK 59 MKT+ IST++++ + L + K + EM G+ +D GL+LG + L+ Q Sbjct: 1 MKTSYISTATLWNSPRSHSARLQAEIAKANVEMDNDGRFADVGLELGHKTGLDLDLRQAV 60 Query: 60 NHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 + + + N L T RL+ +Q L+ ++ + L ++ GK + A Sbjct: 61 DDLKAQQSRNKLTTLRLTATQEALNQIRADGESF---LALVAPGKPFASSGAELAQGAAA 117 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTK-DSLAKKSFDQMLQGFLEENSKSLL 178 + N + GQ LF+GIN+ +P+ T AK +FD Q L Sbjct: 118 RLSALTGHLNTSVAGQALFAGINTDHRPIADSQTGLPPAAKSAFDTAFQTAFG-----FL 172 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 G + ++ A QM F+ D W WS+AS+ NI+ + TE + S N Sbjct: 173 PGTSPDALNITAAQMQAFLDGPAAALFADPQWGATWSSASNVNIRSELGGTETAETSVNA 232 Query: 239 NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 N++ +R + + +G++ +L ++ + KM + G+ + +A LG + + Sbjct: 233 NVQTVRQLAQLYTLGSQIGLSSLAPETQSAVFDKMRNLAGVATFGLTQIQADLGTVQARM 292 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L K + V+ + S L ++++SY +T +L+K+++++Y+ Sbjct: 293 KGIDTQLDAKIKGLTLGYRSFEDVDPVELKTRQSNLQTQLQISYSLTNELRKMNLIDYV 351 >gi|27381967|ref|NP_773496.1| flagellar hook-associated protein FlgL [Bradyrhizobium japonicum USDA 110] gi|27355137|dbj|BAC52121.1| flgL [Bradyrhizobium japonicum USDA 110] Length = 352 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 82/357 (22%), Positives = 151/357 (42%), Gaps = 6/357 (1%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M IST + + K +E TG+ +D GL+LGA L + + Sbjct: 2 MSANYISTLMLSSSLRTSITNNQAALSKASKEATTGRFADVGLELGATTGGDLTLRADWS 61 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +N LV+ RL +Q ++ + + L+ ++ +N I + Sbjct: 62 FADQLVDTNELVSGRLDVTQTRITQLGTTATSFLKDLIA---ARSTDNGGRIVLPPASAN 118 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + N++ G YLFSGIN+ P+ Y T S +K D + Sbjct: 119 LQDLIGALNVSYNGSYLFSGINTQNMPITAYAT-GSASKNQVDADFAAAPP--TGFGFPQ 175 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 VSS+ QM F+ D W NWS+A+D ++ RI TE D S + N Sbjct: 176 SSASVSSITPAQMQTFLNTTFDAEFASPAWNTNWSSATDQVMQSRISTTEVADTSVSANQ 235 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R + + + + L+ V+ K + + ++ + +G ++ I Sbjct: 236 TGFRKLAEAYTMMADLGNAKLSQETFQVVVDKAIGLIGGAITDLATLGGGVGTVQQRITS 295 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L+ + +I++ I V+ A +++TL +I+ + +T++LQK+S++NYL Sbjct: 296 ATNKLKTQQDILNNQIVGMEKVDPTEASVRVNTLQTQIQTALALTSQLQKISLINYL 352 >gi|188579927|ref|YP_001923372.1| flagellar hook-associated protein FlgL [Methylobacterium populi BJ001] gi|179343425|gb|ACB78837.1| flagellar hook-associated 3 family protein [Methylobacterium populi BJ001] Length = 350 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 80/358 (22%), Positives = 147/358 (41%), Gaps = 11/358 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M T IS+ +++ L D +E+ TG+ +D G LG V ++ Sbjct: 2 MTTGFISSLNLWNAPRTGAARLQTDLATATKEIATGRFADVGASLGGGVVESFGLRRQSA 61 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +A SN+ + RL +Q+ L +Q + + L L + + A R Sbjct: 62 VLAALTQSNTAASFRLEATQSALKEIQSAAEATLNELTAL----PADQRAKTVAETARGR 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGY-FTKDSLAKKSFDQMLQGFLEENSKSLLA 179 + N + GQ++F G +S PL Y + S AK + D F A Sbjct: 118 LVALAGALNTSAGGQFVFGGTDSGTAPLTPYEGSPPSAAKAAVDDAFTDFFG------FA 171 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 +++ ++ F+ + W+ WS+AS I +I TE S + N Sbjct: 172 PGSAAAAAITPTELKGFLDGPLAGLFTEVNWSRTWSSASSRTIDSQISLTETATTSTSAN 231 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 R + VI + L+ A+ V T K++ + Q G+ RA LG ++ I Sbjct: 232 AEPFRKLGMAYVIASGLGLSGLSPEAQEVATVKVMDLLGQVSGGLTTLRADLGRTQSQIT 291 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + ++ I V+ A A++ + +++MSY +T +L+ LS++N++ Sbjct: 292 DANARMAKQTTLLTGQIRDLESVDPAEAKARVDAITTQMQMSYGLTAQLRSLSLINFI 349 >gi|256059806|ref|ZP_05450001.1| flagellar hook-associated protein FlgL [Brucella neotomae 5K33] gi|261323786|ref|ZP_05962983.1| flagellar hook-associated protein FlgL [Brucella neotomae 5K33] gi|261299766|gb|EEY03263.1| flagellar hook-associated protein FlgL [Brucella neotomae 5K33] Length = 334 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 88/357 (24%), Positives = 155/357 (43%), Gaps = 24/357 (6%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q + + Q+ +G L A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA---GANNSGETAKTVAKSARSM 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q A Sbjct: 118 LDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFG------FAM 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V++++ +M F++ + +D WA NWS+ASD S + N Sbjct: 171 DDPQVANISGDEMKAFLEGDFAEQFNDANWAANWSDASD--------------TSISANA 216 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G R + AV+ TEF L A + LT + L Q ++ ++ LG+++ Sbjct: 217 DGFRKTVMSAVMVTEFADIGLNASAFDALTTQALQITTQAVTETTSEQTTLGLAQSRTEA 276 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + I++ + V+ + A +++ L +IE SY +T +LQ +S+LNYL Sbjct: 277 ATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSLLNYL 333 >gi|218528729|ref|YP_002419545.1| flagellar hook-associated protein FlgL [Methylobacterium chloromethanicum CM4] gi|218521032|gb|ACK81617.1| flagellar hook-associated 3 family protein [Methylobacterium chloromethanicum CM4] Length = 350 Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats. Identities = 80/358 (22%), Positives = 149/358 (41%), Gaps = 11/358 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M T IS+ +++ L + E+ TG+ +D G LG V ++ Sbjct: 2 MTTGFISSLNLWNAPRTGVSRLQSELANATREIATGRFADVGATLGGGVAGAFGLRRQSA 61 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +A SN+ T RL+ +Q L+ ++ + + L L + + R Sbjct: 62 VLASLTQSNAAATSRLAATQGALTEIRSSAETTLNELTALPT----DQRAKTLVDSARGR 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGY-FTKDSLAKKSFDQMLQGFLEENSKSLLA 179 + N + GQ++F G NS PL Y + S AK + D++ F A Sbjct: 118 LAALAGTLNTSTNGQFVFGGTNSGAAPLASYEGSPTSAAKTAVDKLFTDFFG------FA 171 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 S++ Q+ FI + W+ WS AS + +I TE + S + N Sbjct: 172 PGSTAASTITPNQLQGFIDGPLAGLFTEVNWSRTWSGASSRTLDSQISLTETVTTSVSAN 231 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 R + VI + L+ A+NV T K++ + Q + +A LG ++ I Sbjct: 232 AEPFRKLGMAYVIASGLGLSGLSQEAQNVATGKVMDILGQVSGSLTTMQADLGRAQSQIT 291 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 E + + +++ I V+ A +++ + +++MSY +T +L+ LS++N++ Sbjct: 292 EANARMAKQTALLNGQIRDLENVDPAEAKSRVDAITTQMQMSYGLTAQLRSLSLINFI 349 >gi|163850125|ref|YP_001638168.1| flagellar hook-associated protein FlgL [Methylobacterium extorquens PA1] gi|163661730|gb|ABY29097.1| flagellar hook-associated 3 family protein [Methylobacterium extorquens PA1] Length = 350 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 80/358 (22%), Positives = 148/358 (41%), Gaps = 11/358 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M T IS+ +++ L + +E+ TG+ +D G LG V ++ Sbjct: 2 MTTGFISSLNLWNAPRTGVSRLQSELANATKEIATGRFADVGATLGGGVAGAFGLRRQSA 61 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +A SN+ T RL+ +Q L+ ++ + L L + + R Sbjct: 62 VLASLTQSNAAATSRLAATQGALTEIRSSADTTLNELTAL----PADQRAKTLVDSARGR 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGY-FTKDSLAKKSFDQMLQGFLEENSKSLLA 179 + N + GQ++F G NS PL Y + S AK + D++ F A Sbjct: 118 LAALAGTLNTSTNGQFVFGGTNSGAAPLTSYEGSPTSAAKTAVDKLFTDFFG------FA 171 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 S++ Q+ FI + W+ WS AS + +I TE + S + N Sbjct: 172 PGSAAASTITPNQLQGFIDGPLAGLFTEVNWSRTWSGASSRTLDSQISLTETVTTSVSAN 231 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 R + VI + L+ A+NV T K++ + Q + +A LG ++ I Sbjct: 232 AEPFRKLGMAYVIASGLGLSGLSQEAQNVATGKVMDILGQVSGSLTTMQADLGRAQSQIT 291 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 E + + ++ I V+ A +++ + +++MSY +T +L+ LS++N++ Sbjct: 292 EANARMSKQTALLTGQIRDLENVDPAEAKSRVDAITTQMQMSYGLTAQLRSLSLINFI 349 >gi|300024586|ref|YP_003757197.1| flagellar hook-associated 3 family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526407|gb|ADJ24876.1| flagellar hook-associated 3 family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 351 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 94/357 (26%), Positives = 164/357 (45%), Gaps = 8/357 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 + T ISTS++ + V + +E+ TG+ +D GL LGA+ + Q+ + Sbjct: 2 LTPTFISTSALSSETKASIARIQHRLVDVQKELATGRHADVGLTLGAQTGVAVSLRQDIS 61 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 I +NSLV R+ SQA L+++ Q + L T + + Sbjct: 62 QIQSIKDTNSLVLTRMQASQAALNTLATTSQSFLNALTPAQSTSTMSGTI---VQQANAA 118 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S N + +GQYLFSGINS KPL+ YF A +K ++ Sbjct: 119 MQSIQDQLNSSLDGQYLFSGINSDVKPLDDYFANPPAASAQAVNA-----AFVAKFGMSP 173 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 VS+++A M DF++ D W+ NWS+ASD ++ RI TE + S N Sbjct: 174 SDPGVSAISASDMQDFLQNEFADLFSDPNWSANWSDASDKSVNSRISRTETANTSVTAND 233 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 + R + + +NL +NV+ ++ V G+ G+ +A LG++++ +++ Sbjct: 234 QTFRQLTQAFAMVAGLGFQNLNSSTQNVVLQQATQLVSNGIGGLTRVQAFLGVTQQRVSD 293 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + ++ IS V+ Q+S L +E +Y +T +L KLSI+++L Sbjct: 294 ANDQIDTQIDFLEKSISNLESVDPAEVTTQISDLSTALEAAYSVTNRLSKLSIMDFL 350 >gi|240137259|ref|YP_002961728.1| FlgL protein [Methylobacterium extorquens AM1] gi|240007225|gb|ACS38451.1| FlgL protein [Methylobacterium extorquens AM1] Length = 350 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 80/358 (22%), Positives = 147/358 (41%), Gaps = 11/358 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M T IS+ +++ L + E+ TG+ +D G LG V ++ Sbjct: 2 MTTGFISSLNLWNSPRTGVSRLQSELANATREIATGRFADVGATLGGDVAGAFSLRRQSA 61 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +A SN+ T RL+ +Q L+ ++ + L L + + R Sbjct: 62 VLASLTQSNAAATSRLAATQGALTEIRSSADTTLNELTAL----PADQRAKTLVDSARGR 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGY-FTKDSLAKKSFDQMLQGFLEENSKSLLA 179 + N + GQ++F+G NS PL Y + S AK + D++ F A Sbjct: 118 LAALAGTLNTSTNGQFVFAGTNSGAAPLTSYEGSPTSAAKTAVDKLFTDFFG------FA 171 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 S++ Q+ FI + W WS AS + +I TE + S + N Sbjct: 172 PGSAAASTITPNQLEGFIDGPLAGLFTEVNWNRTWSGASSRTLDSQISLTETVTTSVSAN 231 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 R + VI + L+ A+NV T K++ + Q + +A LG ++ I Sbjct: 232 AEPFRKLGMAYVIASGLGLSGLSQEAQNVATGKVMDILGQVSGSLTTMQADLGRAQSQIT 291 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 E + + ++ I V+ A +++ + +++MSY +T +L+ LS++N++ Sbjct: 292 EANARMSKQTALLTGQIRDLENVDPAEAKSRVDAITTQMQMSYGLTAQLRSLSLINFI 349 >gi|170744545|ref|YP_001773200.1| flagellar hook-associated protein FlgL [Methylobacterium sp. 4-46] gi|168198819|gb|ACA20766.1| flagellar hook-associated 3 family protein [Methylobacterium sp. 4-46] Length = 344 Score = 288 bits (738), Expect = 8e-76, Method: Composition-based stats. Identities = 96/358 (26%), Positives = 171/358 (47%), Gaps = 15/358 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+T+ IST S++ T L +S K +E+ +G+ +D GL+LG+RV+ L +++ Sbjct: 1 MQTSYISTQSLWNAPRSATARLQAESAKATQEVASGRYADVGLELGSRVSVSLALRGQQD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +A N L RL +QA L +Q D + L+ G + + K + + Sbjct: 61 QLAALKQDNGLTALRLDQTQATLKQLQAAADDTLKQLL----GASIDKKVSTISTLAATQ 116 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYF-TKDSLAKKSFDQMLQGFLEENSKSLLA 179 + + N GQYLF+G+N+ + PL Y + S AK + DQ Q Sbjct: 117 LAALTSALNGAANGQYLFAGLNTDKAPLTAYAGSPTSPAKAAVDQAFQAAFGS------- 169 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 + +++ QMT F+ + D+ +W WS+AS + RI E S + N Sbjct: 170 ---ADPATITPAQMTAFLNGPLAQLFDEAHWTATWSSASSDALTSRIAPDETARTSVSAN 226 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 IR + V+ + + ++ + V+ K+ S + QG G++ +A LG + I Sbjct: 227 AEPIRSLAMAYVLASALKADTMSAATQTVIADKITSLLSQGSQGLVGLQADLGTVQARIK 286 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + ++I + I GV+ A +L L +I+MSY +T++L++LS++NYL Sbjct: 287 DANTRMDAQKSLIASRIDDLEGVDPAEAKTRLDRLNAQIQMSYSLTSQLRQLSLVNYL 344 >gi|254559270|ref|YP_003066365.1| FlgL protein [Methylobacterium extorquens DM4] gi|254266548|emb|CAX22312.1| FlgL protein [Methylobacterium extorquens DM4] Length = 350 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 78/358 (21%), Positives = 149/358 (41%), Gaps = 11/358 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M T S+ +++ L + +E+ TG+ +D G LG V ++ Sbjct: 2 MTTGFSSSLNLWNAPRTGVSRLQSELANATKEIATGRFADVGATLGGGVAGAFSLRRQSA 61 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +A SN+ T RL+ +Q L+ ++ + L L + + R Sbjct: 62 VLASLTQSNAAATSRLAATQGALTEIRSSADTTLNELTAL----PADQRAKTLVASARGR 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGY-FTKDSLAKKSFDQMLQGFLEENSKSLLA 179 + N + G+++F+G NS PL Y + S AK + D++ + F A Sbjct: 118 LAALAGTLNTSTNGRFVFAGTNSGAAPLTSYEGSPTSAAKTAVDKLFKDFFG------FA 171 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 S++ Q+ FI + W+ WS AS + +I TE + S + N Sbjct: 172 PGSAAASTITPNQLEGFIDGPLAGLFTEVNWSRTWSGASSRTLDSQISLTETVTTSVSAN 231 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 R + VI + L+ A+NV T K++ + Q + +A LG ++ I Sbjct: 232 AEPFRKLGMAYVIASGLGLSGLSQEAQNVATGKVMDILGQVSGSLTTMQADLGRAQSQIT 291 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 E + + ++ I V+ A +++ + +++MSY +T +L+ LS++N++ Sbjct: 292 EANARMSKQTALLTGQIRDLENVDPAEAKSRVDAITTQMQMSYGLTAQLRSLSLINFI 349 >gi|254505260|ref|ZP_05117411.1| Putative flagellar hook-associated protein 3 [Labrenzia alexandrii DFL-11] gi|222441331|gb|EEE48010.1| Putative flagellar hook-associated protein 3 [Labrenzia alexandrii DFL-11] Length = 339 Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 81/347 (23%), Positives = 147/347 (42%), Gaps = 9/347 (2%) Query: 11 IFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNS 70 + + + KL E+ +G+ D GL LGAR + E N + +N+ Sbjct: 2 LADSSRRNILSQSTLVNKLGVELSSGRKFDIGLDLGARTGESVSVRSEFNFLNGIKDTNA 61 Query: 71 LVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANM 130 L RL+ SQA + M Q + LV L E D I + V+ N Sbjct: 62 LAESRLAVSQAAMDDMLTDAQAFMATLVALKE---DPTTADIVKADAEGNMGLLVSRLNS 118 Query: 131 TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNA 190 G ++F GINS+ P Y S K + D + + V + A Sbjct: 119 QQNGYFIFGGINSANIPFADYSDPTSPNKVAADAAYLAEFGFD------QSNPGVPGITA 172 Query: 191 QQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVA 250 MT ++ D W +WS ASD + RI +E + SA+ N R++ Sbjct: 173 AAMTTYLSGNFDAMFQSPNWEASWSTASDTPLSSRISASETVATSASANETAFRELAKAY 232 Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 + ++ ++ L+D A V+ + T+ ++ + +G ++ + L + N Sbjct: 233 TMMSDLGNEALSDEAYKVVVDTAIQTLGSAMNNLTSVMGKMGTVQEQVKLAGERLDVQTN 292 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I++T I+ V++ +L+T + ++E +Y +T+++Q LS+LN++ Sbjct: 293 ILNTRINDLELVDKEETSVRLTTALTQLETTYAVTSRMQGLSLLNFI 339 >gi|323136999|ref|ZP_08072079.1| flagellar hook-associated protein FlgL [Methylocystis sp. ATCC 49242] gi|322397760|gb|EFY00282.1| flagellar hook-associated protein FlgL [Methylocystis sp. ATCC 49242] Length = 348 Score = 283 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 87/352 (24%), Positives = 155/352 (44%), Gaps = 10/352 (2%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST SI + EL +D + +E+ TG+ +D GL LG R + L Sbjct: 6 STYSITTSLRRTLVELQRDLDRSQKELATGRHADLGLALGMRAGLSYSLGDTYDTAQSIL 65 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 +N LV+ RL T+Q ++++ Q M L+ L+ D R S +F++ Sbjct: 66 ATNDLVSTRLDTTQTAIANLLSNAQAMRATLMSSLDDGGDVGAIETQ---ARVSLSNFIS 122 Query: 127 FANMTDEGQYLFSGINSSEKPLNGYFT-KDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N D +LF+G+NS P+N YF S K + D A V Sbjct: 123 TLNSGDGDSFLFAGVNSEVAPINNYFADPPSPNKVALDAAFIANFG------FAQTDPRV 176 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + + QM F+ E W +WSNASD ++ +I + ID S N ++ Sbjct: 177 ADITGDQMEAFLSGPMTALFAPEAWKTDWSNASDQPLRSQISMSVTIDTSVTANAPALQK 236 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 + + T+ + + A L K + +S +++ +A +G+ ++N+ + Sbjct: 237 LAMAYTMMTDLGASGMNSAAYKALLKSATEVIDDSISALLKTQAQVGVMQRNVVNANQTM 296 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++N I+ ++ V+ A A+++ L+ +IE +Y +T K+ +LS+ YL Sbjct: 297 TIQSNAIEMNLNSLETVDLTEAAARVNGLMTQIETAYTLTAKITQLSLAKYL 348 >gi|114706626|ref|ZP_01439527.1| flagellar hook-associated protein L [Fulvimarina pelagi HTCC2506] gi|114538018|gb|EAU41141.1| flagellar hook-associated protein L [Fulvimarina pelagi HTCC2506] Length = 350 Score = 279 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 92/360 (25%), Positives = 169/360 (46%), Gaps = 13/360 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M +S+ S+ + ++ V +E+ TG+ +D G LG V + E + Sbjct: 1 MTNFLVSSMSLTGAPRASVSRVQQELVIAQKEVSTGRYADVGKSLGTSVARTISMRAELS 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ + +N+ + +R T QA L S + + L L+ G + F IN + Sbjct: 61 NLEKLTTANTAIGQRFETMQAALGS---VAETGESLLSSLISGSGTSVGFDINQRSATAN 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKD---SLAKKSFDQMLQGFLEENSKSL 177 V + + +Y+FSG + P+ D S A S D Q ++ N+ Sbjct: 118 IGQLVGALSGSFGSRYIFSGAKTDTPPIKADLAADYGTSAAFASVDAAWQAYVTANAGG- 176 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSAN 237 + + + A QM F+ + DD WA NWS+ASD+ RI + + + SA+ Sbjct: 177 ------DPAQITAAQMESFLANEFEAVFDDANWAANWSDASDNQTVSRIGENDMMRSSAS 230 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 N + R+IM V+ + F ++L D R VL + T+ +GLS + + R+ +G+ E+ Sbjct: 231 ANDQSFRNIMKSYVMLSNFSGESLADETRQVLASSSIETLSKGLSQLTDLRSDIGLGEER 290 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I L+ + I+ I + ++ + A ++ +L+N +EMSY +T ++ +LS+LN+L Sbjct: 291 IERANEGLKVQTAILKIGIGEEEEIDIYEAKTRIDSLMNTLEMSYALTARVSRLSLLNFL 350 >gi|241113582|ref|YP_002973417.1| flagellar hook-associated 3 family protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861790|gb|ACS59456.1| flagellar hook-associated 3 family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 348 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 83/360 (23%), Positives = 161/360 (44%), Gaps = 15/360 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK + +S+S++ + + + + E TG +D G+ LG + Sbjct: 1 MKASFVSSSAMQNVLRLTISQSQNKLQQASTEATTGTYADIGVSLGNGAAKSINLTSAIA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 A SN++V R+ SQA LSS++ +V L L + D + + Sbjct: 61 QAASFKTSNAVVELRMDASQAALSSLKDAGDSLVSNLTAL-QASQDTTSIAVALQTAGAT 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 V+ AN + G++LF G N +PL+ + S A S G Sbjct: 120 ISQLVSTANTSVNGEFLFGGTNLDSQPLSDQSSAVSDAIVSA-----------LNDYATG 168 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN---NWSNASDHNIKYRIKDTEGIDVSAN 237 +V+ + +++ FI + + W + WS AS ++ RI +E I S N Sbjct: 169 LGKDVNELTGEEIGSFITDTVEPMFSESAWTDTSDGWSTASSTDMTSRISGSETITSSTN 228 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 N G+R + +V+ + ++L+ A++ + K ++ Q SGI+ Q++ LG++++ Sbjct: 229 ANSEGMRYLALASVVVSALFGQDLSSDAQSTVASKAIAYAAQATSGIVTQQSELGLAQER 288 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + L ++ ++ + GV+ + A ++ L ++E +Y + +KLQ LS++NYL Sbjct: 289 LEKANDALDAQSTLLQGNLVDLQGVDTYEASTLVNQLQTQLETAYTLVSKLQSLSLVNYL 348 >gi|327192296|gb|EGE59261.1| flagellar hook-associated protein FlgL [Rhizobium etli CNPAF512] Length = 348 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 80/360 (22%), Positives = 162/360 (45%), Gaps = 15/360 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK + +S+S++ + + + + E TG +D G+ LGA + + Sbjct: 1 MKASFVSSSAMQNVLRLTISQSQTKLQQASTEATTGTYADIGVSLGADAAKSINLTGAID 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 A N++V R+ SQ LSS++ +V L L + D + + Sbjct: 61 QAASFKAGNAVVALRMEASQTALSSLKDAGDSLVSNLTAL-QASQDTTSIAVALQTASAT 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 ++ AN + G++LF G N +PL + + + L G+ G Sbjct: 120 ISQLISTANTSVNGEFLFGGTNLDNQPLTD---QSATVSDTIVTALTGYA--------TG 168 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN---NWSNASDHNIKYRIKDTEGIDVSAN 237 +V+ + +++ FI + + W + WS AS ++ RI +E I S N Sbjct: 169 LGKDVNELTGEEIGSFITDTVEPLFSESAWTDASTGWSTASSTDMTSRISGSETITSSTN 228 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 N G+R + +V+ + ++L+D A++ + K + Q SGI+ +++ LG+S++ Sbjct: 229 ANSDGMRYLALASVVVSALFGQDLSDDAKSTVASKAIGYAAQATSGIVTEQSQLGLSQER 288 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + L +++++ + G + + A ++ L ++E +Y + +KLQ LS++NYL Sbjct: 289 LEKADDALDAQSSLLQGKLVDLQGADTYEASTLVNQLQTQLETAYTLVSKLQSLSLVNYL 348 >gi|209547528|ref|YP_002279446.1| flagellar hook-associated protein FlgL [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538772|gb|ACI58706.1| flagellar hook-associated 3 family protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 348 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 82/360 (22%), Positives = 161/360 (44%), Gaps = 15/360 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK + +S+S++ + + + + E TG +D G+ LGA + + Sbjct: 1 MKASFVSSSAMQNVLRLTISQSQTKLQQASTEATTGTYADIGVSLGAGTAKTISLTSAID 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 A SN++V R+ SQ LSS++ +V L L + D + + Sbjct: 61 QAASFQTSNAVVELRMDASQTALSSLKDAGDSLVSNLTAL-QASQDTTSIAVALQTAGST 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 ++ AN + G++LF G N +PL + S + L + G Sbjct: 120 ISQLISTANTSVNGEFLFGGTNLDSQPLTD---QSSTVSDTIVTALGDYA--------TG 168 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN---NWSNASDHNIKYRIKDTEGIDVSAN 237 +V+ + ++ FI + + W + WS AS ++ RI +E I S N Sbjct: 169 LGKDVNELTGDEIGTFITGTVEPMFSESGWTDASAGWSTASSTDMTSRISSSETITSSTN 228 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 N G+R + +V+ + ++L+ A++ + K + Q SGI+ Q++ LG+S++ Sbjct: 229 ANSEGMRYLALASVVVSALFGQDLSSDAQSTVATKAIGYAAQATSGIVTQQSQLGLSQER 288 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + L +++++ + GV+ + A ++ L ++E +Y + +KLQ LS++NYL Sbjct: 289 LEKANDALDAQSSLLQGKLVDLQGVDAYEASTLVNQLQTQLETAYTLVSKLQGLSLVNYL 348 >gi|116248738|ref|YP_764579.1| flagellar hook-associated protein FlgL [Rhizobium leguminosarum bv. viciae 3841] gi|115253388|emb|CAK11776.1| putative flagellar hook associated protein [Rhizobium leguminosarum bv. viciae 3841] Length = 348 Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats. Identities = 84/360 (23%), Positives = 161/360 (44%), Gaps = 15/360 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK + +S+S++ + + + + E TG +D G+ LGA + Sbjct: 1 MKASFVSSSAMQNVLRLTISQSQNKLQQASTEATTGTYADSGVSLGAGAAKSINLTSAIA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 A SN++V R++ SQ LSS++ +V L L + D + + Sbjct: 61 QAASFKMSNAVVELRMNASQTALSSLKDAGDSLVSNLTAL-QASQDTTSIAVALQTASAT 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 V+ AN + G++LF G N +PL+ + S S G Sbjct: 120 ISQLVSTANTSVNGEFLFGGTNLDSQPLSDQSSAVSDTIVSA-----------LNDYATG 168 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN---NWSNASDHNIKYRIKDTEGIDVSAN 237 +VS + +++ FI + + W + WS AS N+ RI +E I S N Sbjct: 169 LGKDVSELTGEEIGSFITDTVEPMFSESAWTDASEGWSAASSTNMTSRISGSETITSSTN 228 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 N G+R + +V+ + ++L+ A++ + K ++ Q SGI+ Q++ LG++++ Sbjct: 229 ANSEGMRYLALASVVVSALFGQDLSSDAQSTVASKAIAYAAQATSGIVTQQSELGLAQER 288 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + L ++ ++ + GV+ + A ++ L ++E +Y + +KLQ LS++NYL Sbjct: 289 LEKANDALDAQSTLLQGNLVDLQGVDTYEASTLVNQLQTQLETAYTLVSKLQSLSLVNYL 348 >gi|218662014|ref|ZP_03517944.1| flagellar hook-associated protein FlgL [Rhizobium etli IE4771] Length = 371 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 75/348 (21%), Positives = 149/348 (42%), Gaps = 15/348 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK + +S+S++ + + + + E TG +D G+ LGA + + Sbjct: 36 MKASFVSSSAMQNVLRLTISQSQTKLQQASTEATTGTYADIGVSLGAGAAKSINLTSAID 95 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 A SNS+V R+ SQ LSS++ +V L L + D + + Sbjct: 96 QAASFKTSNSVVALRMEASQTALSSLKDAGDSLVSNLTAL-QASQDTTSIAVALQTASAT 154 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 ++ AN + G++LF G N +PL S + G Sbjct: 155 ISQLISTANTSVNGEFLFGGTNLDNQPLTDQSATVSDTIVTA-----------LTDYATG 203 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN---NWSNASDHNIKYRIKDTEGIDVSAN 237 +V+ + +++ FI + + W + WS AS ++ RI +E I S N Sbjct: 204 LGKDVNELTGEEIGSFITDTVEPMFSESAWTDASSGWSTASSTDMTSRISGSETITSSTN 263 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 N G+R + +V+ + ++L+D A++ + K + Q SGI+ Q++ LG+S++ Sbjct: 264 ANSDGMRYLALASVVVSALFGQDLSDDAKSTVASKAIGYAAQATSGIVTQQSQLGLSQER 323 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMIT 345 + + L +++++ + GV+ + A ++ L ++E +Y + Sbjct: 324 LEKADDALDAQSSLLQGKLVDLQGVDTYEASTLVNQLQTQLETAYTLV 371 >gi|217976242|ref|YP_002360389.1| flagellar hook-associated protein FlgL [Methylocella silvestris BL2] gi|217501618|gb|ACK49027.1| flagellar hook-associated 3 family protein [Methylocella silvestris BL2] Length = 347 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 76/356 (21%), Positives = 150/356 (42%), Gaps = 9/356 (2%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 ++ IST SI + ++ + E TG +D GL L ++ + + + Sbjct: 1 MSSYISTQSISSSLRQSVLKMQAELSSAQTEAATGNHADIGLSLASKTGQSVSLQAQAAM 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + +NS+ R++ Q L +Q Q ++ L L D+ Sbjct: 61 LQTLSETNSIALTRMNMIQNQLGDLQSGAQSLLNSL---LSTNGSAQNAATIEASGADNL 117 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 + + N T G YLF+GIN++ PL Y+ + +K + D ++ Sbjct: 118 KGLIASLNSTLNGDYLFAGINTATAPLTDYYATGASSKTAVDAAFSTAFG------MSQT 171 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 V+ ++A M DF+ W N+WS+ASD I I + S + N Sbjct: 172 SSSVAGISASAMQDFLDGPFAALFQGSNWTNDWSSASDEAIASSISPGGAVISSVSANQS 231 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 RD+ + ++ + + +VL K + G+S + + +A LG+++ ++++ Sbjct: 232 AFRDLAEAYTMLSDLGGEKYSQATYDVLVGKARDLLTDGISALSDAQAGLGVAQSSVSDA 291 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + NI+ + I + + ++S L +I+ +Y +T+ LQ LS++ YL Sbjct: 292 NTQMSLQMNILSSQIGNLESINGYEVQVRISDLQTQIQTAYSLTSHLQDLSLVKYL 347 >gi|182680455|ref|YP_001834601.1| flagellar hook-associated protein FlgL [Beijerinckia indica subsp. indica ATCC 9039] gi|182636338|gb|ACB97112.1| flagellar hook-associated 3 family protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 348 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 79/340 (23%), Positives = 152/340 (44%), Gaps = 9/340 (2%) Query: 18 LTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLS 77 + K E+ TG+ +D GL LG+ + + Q++N + +N + + RL Sbjct: 18 TIQASQAKLSKTQIEISTGRYADVGLALGSGTAAGISLRQQENVLKTITTTNGIASTRLD 77 Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 T+Q+ LSS+ Q + L+ D + + + +S N T G YL Sbjct: 78 TTQSVLSSIGANAQSFLESLLGATSATGD---PAVLQASAQVNLQSLTASLNTTLNGDYL 134 Query: 138 FSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFI 197 F G+NS ++P+ Y T S + DQ Q ++ VSS+ A M +F+ Sbjct: 135 FGGVNSGQQPITDYSTPGSSNGNALDQAFQTTFG------ISQSDSAVSSITASNMQNFL 188 Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 W+ NWS ASD + +I D + + S + N + +++ + + Sbjct: 189 DSSFANLFQGSNWSTNWSQASDTVLTTQINDHQTANTSVSANEKAFKELFSAYTMIGQLG 248 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 + NL A + + ++TV+ +S + + +G+ + I + + N + + ++ Sbjct: 249 TANLNSSAFKTVVNQAVTTVKSAISDLTNIQGGVGLVQNQIVNANDTMSLRMNYLTSQVN 308 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V+ A +++ L +IE +Y +T++L KLS++NYL Sbjct: 309 TLESVDPAEASTRMTALQTQIETAYSLTSQLHKLSLVNYL 348 >gi|86360904|ref|YP_472791.1| flagellar hook-associated protein FlgL [Rhizobium etli CFN 42] gi|86285006|gb|ABC94064.1| flagellar hook-associated protein [Rhizobium etli CFN 42] Length = 348 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 80/360 (22%), Positives = 158/360 (43%), Gaps = 15/360 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK + +S+S++ + + + + E TG +D G+ LG+ + Sbjct: 1 MKASFVSSSAMQNVLRLTISQSQNKLQQASTEATTGTYADIGVSLGSGAAKSINLTSAIA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 A SNS+V R+ SQ LSS++ +V L L + D + + Sbjct: 61 QAASFKTSNSVVALRMEASQTALSSLKDAGDSLVSNLTAL-QASQDTTSIAVALQSANAT 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 ++ AN + G++LF G N +PL + S + L + G Sbjct: 120 ISQLISTANTSVNGEFLFGGTNLDSQPLTD---QSSAVSDTIVTALNDYA--------TG 168 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASD---HNIKYRIKDTEGIDVSAN 237 +VS + +++ FI + + W + S S ++ R+ +E I S N Sbjct: 169 LGKDVSELTGEEIGSFITDTVEPMFSESSWTDASSGWSSASSTDMTSRVSASETITSSTN 228 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 N G+R + A + + ++L+ A++ + K + Q SGI+ Q++ LG+S++ Sbjct: 229 ANSEGMRYLALAATVVSALFGQDLSSDAQSTVASKAIGYAAQATSGIVTQQSELGLSQER 288 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + L +++++ + GV+ + A ++ L ++E +Y + +KLQ LS++NYL Sbjct: 289 LEKANDALDAQSSLLQGNLVDLQGVDTYEASTLVNQLQTQLETAYTLVSKLQNLSLVNYL 348 >gi|296445194|ref|ZP_06887154.1| flagellar hook-associated 3 family protein [Methylosinus trichosporium OB3b] gi|296257368|gb|EFH04435.1| flagellar hook-associated 3 family protein [Methylosinus trichosporium OB3b] Length = 349 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 77/357 (21%), Positives = 147/357 (41%), Gaps = 9/357 (2%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 + ST+S+ + + K E+ TG+ +D GL LG + Sbjct: 1 MVSITSTASLANALRKTIVDTQNQMSKAQVEVSTGRVADLGLALGGGTAQDVSLGVRSAD 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 ++ +SN+++ RLST+ L ++ Q+ + LV G + + Sbjct: 61 LSSITNSNAVIAARLSTTDTSLETIATTAQNFLETLVGAQSGAGSDAQ--AIQDNAVSGL 118 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYF-TKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S + + + G YLF G+++S P+ YF S +K + DQ + Sbjct: 119 KSLIGALDTSIGGVYLFGGVSTSTSPIADYFSDPPSASKDALDQAFVSAFG------VTQ 172 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 V S+ QM +++ W +WS+ASD RI ++ D S + N Sbjct: 173 SDDAVGSITQSQMQSYLEGGFSDLFSASGWTTSWSSASDRATSNRISLSQIADTSVSAND 232 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 R I + + L A N + + +T+ + + RA +G+ + N++ Sbjct: 233 SAFRGIAAAYAMVADSGVTKLGSDAYNEVLRTATTTLSSAIGDLTRLRASVGVMQTNVSN 292 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L + N + + I V+ + A +L+ L ++E SY +T K+Q+L++ Y+ Sbjct: 293 ANDSLTAQQNALASQIGALENVDPYEASTRLNNLTTQLETSYTLTGKIQQLTLTKYI 349 >gi|12330682|gb|AAG52879.1| FlgL [Brucella abortus] Length = 309 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 77/288 (26%), Positives = 126/288 (43%), Gaps = 10/288 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q + + Q+ +G L A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA---GANNSGETAKTVAKSARSM 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q A Sbjct: 118 LDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFG------FAM 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V++++ +M F++ + +D WA NWS+ASD IK RI TE D S + N Sbjct: 171 DDPQVANISGDEMKAFLEGDFAEQFNDANWAANWSDASDTRIKSRISPTETADTSISANA 230 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQR 288 G R + AV+ TEF L A + LT + L Q ++ ++ Sbjct: 231 DGFRKTVMSAVMVTEFADIGLNASAFDALTTQALQITTQAVTETTSEQ 278 >gi|90418363|ref|ZP_01226275.1| putative flagellar hook-associated protein [Aurantimonas manganoxydans SI85-9A1] gi|90338035|gb|EAS51686.1| putative flagellar hook-associated protein [Aurantimonas manganoxydans SI85-9A1] Length = 352 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 77/350 (22%), Positives = 148/350 (42%), Gaps = 17/350 (4%) Query: 14 RMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVT 73 + + +E+ TG+ +D GL LG+R + E+ +N+L+ Sbjct: 14 APRSAVFRIQDELRNAQKEVTTGRFADVGLTLGSRTNQTVSLRVERESAIRIQEANTLIG 73 Query: 74 KRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDE 133 +R T Q L S+ K ++++ L+ + + + + F+ N Sbjct: 74 QRFDTMQTALESIAKTGENLLASLI---SNGPADAGISASVQQAKAGLQQFMGAINAASG 130 Query: 134 GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQM 193 ++LFSG + + L +A D +K + + +A + Sbjct: 131 SRFLFSGAATDQPALAFTKVGGGVASSYEDN-------STAKKAVNDALTAAAPASAADL 183 Query: 194 TDFIKQLEDKFS------DDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM 247 F+ + D W + WS A + RI D+E +DVS + R+I+ Sbjct: 184 EAFLDGAFNDLFKVPQPSDGTGW-DMWSKADSSPVVNRISDSETLDVSYPASDEAFRNIV 242 Query: 248 FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQN 307 V+ ++ +K + + R +LT + + T+ GLS + E RA +G + + L Sbjct: 243 KAYVMISDLGAKTMDESQRQLLTSRAVETLSLGLSQLTEIRAEIGGKQSRLEITNETLGT 302 Query: 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + N++ IS V+ + A +++TL N +E SY +T ++ +LSI+NYL Sbjct: 303 RKNVLTMSISSFEDVDAYEASTRVTTLTNLLEASYALTARISRLSIMNYL 352 >gi|222084887|ref|YP_002543416.1| flagellar hook-assosiated protein [Agrobacterium radiobacter K84] gi|221722335|gb|ACM25491.1| flagellar hook-assosiated protein [Agrobacterium radiobacter K84] Length = 331 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 94/343 (27%), Positives = 167/343 (48%), Gaps = 12/343 (3%) Query: 15 MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 M ++ + E TG +D G+ LG+ S + ++ I L SNS+V + Sbjct: 1 MRQTIRQAQNEMTDASTEATTGVYADIGVSLGSGTASNVNLTRDVTRIDSILSSNSVVNQ 60 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG 134 R+++SQ LS M Q + LV L G +D++ + + SFV AN G Sbjct: 61 RMTSSQTALSDMSSQAQKFMDQLVALR-GNSDDSSIQLTQQTATATMSSFVADANTMVNG 119 Query: 135 QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 +YLF+G N+ +P+ T + A ++ Q + +S + QM Sbjct: 120 EYLFAGTNTDVQPMTDNSTAATTA-----------IQSALSDYATAQGVAISDLTGDQMK 168 Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGT 254 DFI + + + ++WS+ASD N+ RI ++E I+ S N N G+R + + Sbjct: 169 DFITNVAEPLVTSDSSWSDWSSASDQNMSSRISNSEVIESSTNANATGMRYLALSTTVAN 228 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 + + L+ A N +T + S +Q + G+ Q + LG+S+ + + L + II+T Sbjct: 229 ALMGQGLSQDALNAVTDQATSYARQAIDGLNNQASQLGLSQARLTDANTSLNAQKTIINT 288 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 IS GV+ + A ++++L ++E +Y I +K+Q+LS++NYL Sbjct: 289 NISDLTGVDAYEASTKVNSLQTQLETAYTIVSKIQQLSLVNYL 331 >gi|158422273|ref|YP_001523565.1| flagellar hook-associated protein FlgL [Azorhizobium caulinodans ORS 571] gi|158329162|dbj|BAF86647.1| putative flagellar hook-associated protein [Azorhizobium caulinodans ORS 571] Length = 352 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 91/363 (25%), Positives = 157/363 (43%), Gaps = 19/363 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+++ IST S L K + E+ TG+ +D GL+LG + + ++ E N Sbjct: 1 MQSSYISTMSWTLSAMKSITSLQTQIEKKNTELATGRYADIGLELGVKTSLSVDLRHEYN 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + L SNSL ++ SQ L+++ L L + + Sbjct: 61 QVQGLLDSNSLTDSIMTRSQTGLTNILNNASTYQKTL---LSSQASAETVTQMQLEGQQG 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 S ++ N TD +Y+F GINS + P+ + T +A ++ Q GF + Sbjct: 118 LASLLSSLNTTDGTRYVFGGINSGQTPMKDFATNAQVAIQTAFQTAFGFPVSDP------ 171 Query: 181 QHLEVSSMNAQQMTDFIKQLED-------KFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 + +++ + QM F+ + +D WA WSNAS N+ +I TE + Sbjct: 172 ---QAANITSGQMQTFLNNVFSEDNTNTSALFNDTNWAAQWSNASSTNLTRQISQTENVS 228 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI 293 VS N +R + + +L A + +T+ G++G+ A +G+ Sbjct: 229 VSTTANDTAMRKLAMAYSMMGYLGVGSLNMSALQTVMDTSRATLSAGMTGVTNTAAAIGV 288 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 S+ + L +++ + I+ V+ A QL TL N++ MSY TTKL +LSI Sbjct: 289 SQTRVTTANSELNKTLDVVKSRINSLESVDPAEAKTQLDTLTNQLSMSYSTTTKLLQLSI 348 Query: 354 LNY 356 +NY Sbjct: 349 MNY 351 >gi|304392491|ref|ZP_07374431.1| putative flagellar hook-associated protein FlgL [Ahrensia sp. R2A130] gi|303295121|gb|EFL89481.1| putative flagellar hook-associated protein FlgL [Ahrensia sp. R2A130] Length = 347 Score = 238 bits (608), Expect = 9e-61, Method: Composition-based stats. Identities = 76/355 (21%), Positives = 149/355 (41%), Gaps = 14/355 (3%) Query: 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHI 62 T +ST + + L + K E T + ++ L+LG + L E E + Sbjct: 7 TPHVSTRILVGGPASDIRRLQAEIEKSQTEAATNRMANPALELGQQNGLRLRLEGEVQVL 66 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 R+ + L T RLS +Q+ L+++++ + L+ + G TD N A + + Sbjct: 67 ESRVQAYDLATVRLSVTQSALTAIKQQGEQFSQSLITAVGGVTDGNFI---AATAEATLQ 123 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 F + N + G +LF+GI+S P+ S +F GF + S Sbjct: 124 GFRSAMNTSAGGDHLFAGIDSGSAPIGDLSAIRSDIVATFTARF-GFPPGDPAS------ 176 Query: 183 LEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG 242 ++ + DF++ W + S ASD +K R + +D+S + N Sbjct: 177 ---QNLAPDLVVDFLQNDLQPRLTGTAWTSLVSGASDEAVKLRTGTGDTVDISISANESA 233 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 +R +M A++ E + L + L + + QGL+ + +G++ I+ Sbjct: 234 MRGVMAAALMTAEL-APYLNADSVAALARTSTDILAQGLADTNVLQTRIGLTTGQIDNAT 292 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++T + V+ A ++ + + ++E +Y +T +LQ LS+L +L Sbjct: 293 AADNARRAGLETVSEDMVRVDPFEAASRFNAQVTQLETAYALTGRLQGLSLLRFL 347 >gi|254698188|ref|ZP_05160016.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 2 str. 86/8/59] gi|260762635|ref|ZP_05874967.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 2 str. 86/8/59] gi|260673056|gb|EEX59877.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 2 str. 86/8/59] Length = 246 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 10/256 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK IST + L + + VK +E TG D GL LG+R + +E + Sbjct: 1 MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ N LV +R++ +Q + + Q+ +G L A R Sbjct: 61 RLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLA---GANNSGETAKTVAKSARSM 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S N + G+Y+F+G+N+ KP++ Y S A+ + Q Q A Sbjct: 118 LDSVTGLLNTSFNGEYIFAGVNTDVKPISDY-ADGSTAQNAVRQAFQDHFG------FAM 170 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V++++ +M F++ + +D WA NWS+ASD IK RI TE D S + N Sbjct: 171 DDPQVANISGDEMKAFLEGDFAEQFNDANWAANWSDASDTRIKSRISPTETADTSISANA 230 Query: 241 RGIRDIMFVAVIGTEF 256 G R + AV+ TEF Sbjct: 231 DGFRKTVMSAVMVTEF 246 >gi|89068726|ref|ZP_01156112.1| flagellar hook-associated protein [Oceanicola granulosus HTCC2516] gi|89045689|gb|EAR51751.1| flagellar hook-associated protein [Oceanicola granulosus HTCC2516] Length = 353 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 136/367 (37%), Gaps = 36/367 (9%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ + + + +E+ TG+ +D GA T +L+ + Sbjct: 8 VANYGQSSSLRQDVATVRDRLDNVGQEVATGKRTDIYRAAGADATELLQLHAAFERQQAQ 67 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVIL-LEGKTDNNKFPINAGMLRDSYESF 124 + ++ + RL + + S++ + + + V L + G D + + E Sbjct: 68 IDADKALATRLDAMSSVMDSIRTLGEQVRTAAVNLTVTGSGDYGALKAAS---HTALEHM 124 Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEE------------ 172 + N G LF+G+ ++ L G+ D+ + ++ G + Sbjct: 125 IGQLNTRHAGAALFAGVETASAALTGWTDADTGTGQVPRDLVAGIIGGGITDAADAAAKA 184 Query: 173 -NSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEG 231 + ++L AG E + N D + S RI Sbjct: 185 ADLEALFAGPDFEATFYNGAPQVDGAGNPVPRLS------------------ARIDAGVT 226 Query: 232 IDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDG-ARNVLTKKMLSTVQQGLSGIIEQRAV 290 +D N +RD+ + F + DG AR + G+SG IE A Sbjct: 227 LDFGVQANDGPLRDLYRGLAMFAAFDVSAIADGPAREAWIGAATDALSSGISGTIEMEAR 286 Query: 291 LGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 LG ++E L++++++ + I+ V+ + A +L+ L ++E SY++T +L Sbjct: 287 LGSQRNALDETLALLESRSDLYNAQINDLQSVDPYEAATRLADLETQLEASYLVTRRLAD 346 Query: 351 LSILNYL 357 LS L Y+ Sbjct: 347 LSFLRYM 353 >gi|84502374|ref|ZP_01000510.1| flagellar hook-associated protein [Oceanicola batsensis HTCC2597] gi|84389186|gb|EAQ01983.1| flagellar hook-associated protein [Oceanicola batsensis HTCC2597] Length = 360 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 70/358 (19%), Positives = 150/358 (41%), Gaps = 6/358 (1%) Query: 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHI 62 +S+ T ++ + + EE+ TG+ +D LG R + Sbjct: 5 VQTVSSLQSLLTRQRTTTDMTRLMMIAEEEVATGRHADPFSALGTRAVEAMNTRAVYERT 64 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 R+ SN+L+ RL L +++ QD++ + I T + + + + +D+Y+ Sbjct: 65 EGRIESNTLLQNRLDLMATALGNVRDAAQDVL-TMTISNTDPTSSRQLYLK-DLAQDAYD 122 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEE--NSKSLLAG 180 S V+F N + G+ LF G++S +N + +D+ S ++ + + Sbjct: 123 SIVSFMNASYNGKALFGGVDSDRTAMNSWAERDAATGLSASDVMSTIVGGGITDAADANA 182 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 + E+ ++ + E F + + NA + + I + I N Sbjct: 183 KLAEIDAVFNGTPANPAWGYEATFFNGTPLEDGLGNA-NPRLAASIDENLDIGYGVQAND 241 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDG-ARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 RG RD+M + +TD A + + + G++G++ A G +K + Sbjct: 242 RGFRDMMRGLAMLAAGDPATITDDGAYEAWVGEAAAALGAGVTGVLNAEARTGSMQKLVE 301 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + L K ++ +IS+ V+ A ++L++ +++ SY +T +L +LS +N++ Sbjct: 302 DSNDRLHAKREVLTLHISELESVDPFEAASRLTSTQTQLQASYAVTARLSQLSFVNFM 359 >gi|163744344|ref|ZP_02151704.1| flagellar hook-associated protein [Oceanibulbus indolifex HEL-45] gi|161381162|gb|EDQ05571.1| flagellar hook-associated protein [Oceanibulbus indolifex HEL-45] Length = 353 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 70/353 (19%), Positives = 141/353 (39%), Gaps = 8/353 (2%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ R T L + + +E+ TG ++ LG R + + Sbjct: 8 ISTALQSLRQREQTSRLAAEISDVSKEVTTGIKANPYDDLGHRSADAIAIRMQITRNDGF 67 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 L SN+L+ +R + L +M+ + Q ++ R + + + Sbjct: 68 LTSNALLDRRFLAVETSLGAMRDVGQSVLEQ--AFSSDSAGGLSTTYLQQAARTALDQVL 125 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 A ++D +L SG S PL + ++ + S + + +L +V Sbjct: 126 ERAAVSDSSGFLMSGTRSDTNPLQTWDVQNPNSGVSPANAVANVIGGVPATLA-----DV 180 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + F D ++ E N + + + R +T+ + +A N +RD Sbjct: 181 QTAIDGLKAAFSDTAADPANNFENTFYNGAPTGNPPLTSRTSETQTLTQTAQANDPAMRD 240 Query: 246 IMFVAVIGTEFLSKNLTDGA-RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 +M + + F ++ D A R+ + S + GL G+ + G+ + + Sbjct: 241 LMRGLAMLSAFNPSDIPDEAARDAWLSEARSAIGAGLEGLTDLETQTGLKRGQLADSISA 300 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +++ ++ + GV+Q+ A +L+ L N++E SY +T +L +LS LNYL Sbjct: 301 QESRALFLNGEVMNLEGVDQYDAATRLTQLQNQLESSYAVTARLSRLSFLNYL 353 >gi|312115278|ref|YP_004012874.1| flagellar hook-associated protein FlgL [Rhodomicrobium vannielii ATCC 17100] gi|311220407|gb|ADP71775.1| flagellar hook-associated protein FlgL [Rhodomicrobium vannielii ATCC 17100] Length = 344 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 76/354 (21%), Positives = 144/354 (40%), Gaps = 13/354 (3%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 + +STS ++ + K+ E +G+ SD LG++ + + + Sbjct: 2 STVSTSVLYSIAPGAVADTQAKIAKVTAETSSGKISDPASALGSQYGLYRTLQAQSTSLT 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 +++NS+V ++ S L+++ + + L+ A + ES Sbjct: 62 NTINANSIVLNKIKASTTSLTAIYSDAETLSNALLSAK----STGDVSALATQAKGMVES 117 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 +T N + G Y+F G N++ PLN Y A S G + ++ + Sbjct: 118 LITSLNTSTGGAYVFGGSNTTVTPLNDYSDAAQAATASAFYAAFGMTQSDTSA------- 170 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 SS+ + M F+ DD W+ NWSNAS RI + + S + N Sbjct: 171 --SSITSSDMASFLSGDYATLFDDTSWSGNWSNASSTRGTARISEGQTATTSVSANEEAF 228 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 R + + ++ NL + + L V ++GI + LG+S+ I Sbjct: 229 RQLAEAYTMISDLGLDNLNSTTQQTVIVAALEKVNSAMAGISGMQTTLGVSQSQITSTNA 288 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L + ++D + S+ + A A+L+ L ++ SY +T ++ LS++NYL Sbjct: 289 RLTTEKALVDNWSSELGDSDPTEASAKLAQLETLLDTSYTLTNRIYSLSLVNYL 342 >gi|254473339|ref|ZP_05086736.1| flagellar hook-associated protein 3 (HAP3) FlgL, putative [Pseudovibrio sp. JE062] gi|211957455|gb|EEA92658.1| flagellar hook-associated protein 3 (HAP3) FlgL, putative [Pseudovibrio sp. JE062] Length = 276 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 106/279 (37%), Gaps = 3/279 (1%) Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 L ++ + D L+ L N + + + N G Y+F Sbjct: 1 MNTALDNIHESNADFRSDLIALKSNS---NNLKTASNLAYTELDKLTNALNTNVSGVYVF 57 Query: 139 SGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 GIN+ P+N + + + +Q Q F + + F+ Sbjct: 58 GGINTGTAPVNDFKSLPGGPEVQIEQAFQTFFGHSIDDPATESIPAKGDPAGKDWETFLD 117 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLS 258 K W +WS+A++ + I++ S + N + ++ I F Sbjct: 118 SAGFKDIFGADWTTHWSSATNEKMTSTIENGVTTTGSGSANEKAFGELAEGLSIVAVFGK 177 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 NL A +T + ++++ G+ I A G + N+ + K ++++ I+ Sbjct: 178 LNLNTEAEKFITDRAVNSLNSGVDKTIVIEAQNGAIKTNVERTNSDIIAKKDVLNMRIND 237 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++++ A +LS ++E +Y IT K++ L+I+ YL Sbjct: 238 LENIDENRAAVELSLAQTQLEATYAITAKIKDLNIMKYL 276 >gi|209963557|ref|YP_002296472.1| flagellar hook-associated protein 3 FlgL, putative [Rhodospirillum centenum SW] gi|209957023|gb|ACI97659.1| flagellar hook-associated protein 3 FlgL, putative [Rhodospirillum centenum SW] Length = 355 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 141/357 (39%), Gaps = 2/357 (0%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + IST ++ + L + + D L E+ TG+ SD +G+R +L+ + Sbjct: 1 MSVSSISTMALARQTRNLVRTMQSDMHTLELEIGTGKKSDVAGSVGSRAALLLDLRNARQ 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 AE S + RL+ Q L ++ + L + + G ++ Sbjct: 61 TTAEYRQSIQTQSSRLTLMQEALDKVRGSATQVR-DLALSVSGSGVGAAAATIDEAALNA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 ++ + N + G+YLF+G +P+ D + S A Sbjct: 120 IQTLSSMFNSSQSGRYLFAGTRFDTRPMQPPTETAPSGIAPLDAVKSVLSSLGPTSTAAD 179 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 ++ N + F + E ++ + S ++ R + + + Sbjct: 180 VDAALNGPNGLS-SIFSDTYGGGPAAPENFSKTFFLGSTTQVQGRAGEDLPVTYACTAGD 238 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 +R ++ + S++++ A + + + Q +I+ + ++G+ E+ + Sbjct: 239 EPVRTLLKGLYLLAAVPSESVSTEAYQRIADQGWRLITQATDELIDTQGIIGLQEELLKR 298 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ ++ I++ + + +L+TL ++E ++ +T+++ KLS++++L Sbjct: 299 ADERHEVEDGLLSKQITQMEMADPYETGLRLNTLETQLEATFAMTSRISKLSLIDFL 355 >gi|114765249|ref|ZP_01444381.1| flagellar hook-associated protein [Pelagibaca bermudensis HTCC2601] gi|114542384|gb|EAU45412.1| flagellar hook-associated protein [Roseovarius sp. HTCC2601] Length = 353 Score = 182 bits (461), Expect = 8e-44, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 129/354 (36%), Gaps = 13/354 (3%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST E+ K +E+ +G SD LG + L ++ Sbjct: 9 STLYSNLLRRNANAEMQTQLAKAEQELASGVKSDIYKSLGPSASEALNLNASLERDEAQI 68 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 +N+L+ RL T L SM + +Q + + T+ + S +S ++ Sbjct: 69 AANTLLGGRLDTMSGALGSMGEAIQRTLDLSIA--NAGTNGGTAAGIQTEAQASLDSLLS 126 Query: 127 FANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEE--NSKSLLAGQHLE 184 AN+ G LF+G + + Y + + + ++ G L ++ + + E Sbjct: 127 MANVNYGGIPLFAGPSDGTSAIQDYDSARADTGLTPKAVIDGILAGGLDTAADAEARIAE 186 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + ++ D + + F + I D + N R Sbjct: 187 LDAIFDNTAADPDQTFDGLFFTGATGTA--------PMSVGIGDGITVTYGVQANDEAFR 238 Query: 245 DIMFVAVIGTEFLSKNLTD-GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + + + D A + GL+G+++ R L + I+E Sbjct: 239 QVFQGLSMLAATDVAKIDDPAAYETWISTANDRLSAGLAGLLDSRMKLDTASARIDEANT 298 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++++ N+ +++ + V+ + A ++ L +++ SY T +L +LS LN++ Sbjct: 299 RMEDRANLYKNRVAEMVEVDSYEAATTITALETQLQASYAATARLSQLSFLNFM 352 >gi|288962671|ref|YP_003452965.1| flagellar hook-associated protein 3 [Azospirillum sp. B510] gi|288914937|dbj|BAI76421.1| flagellar hook-associated protein 3 [Azospirillum sp. B510] Length = 367 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 124/370 (33%), Gaps = 16/370 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M +ST + + D + +EE+ TG +D +GA + + Sbjct: 1 MLYNALSTLGMSRTLQSTMTRQQLDLTRANEEVATGIHADVAATIGAGTGRDIALRNLFD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 E + + L+ R+ + ++S+ D++ L + R Sbjct: 61 RTDEYVKTTDLLDGRMKMMDSAMTSILTSGTDLLAAASTGLG--QQSPTGSSLQIRARGV 118 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + V N + YLF+G + P+ S + + Q+++ ++ + Sbjct: 119 LDQVVGLLNASAGNVYLFAGTALDQPPMRNVDGDKSGLR-APMQIVRDAIQSATGGPAMP 177 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSN-------------ASDHNIKYRIK 227 ++ ++ D + + + + + + Sbjct: 178 TTAAETAAVVARLDDLFAVRDPATPAPAPLTDTFEGGFYTGTTALQPGGTASPRVSGQPA 237 Query: 228 DTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQ 287 D+ I N +R ++ + S + A K + + GL + E Sbjct: 238 DSAAIAYGVQANDPMMRQMLEGIYMLAAVDSSKMDVDAYPDYIKTAVDKLSGGLGKLREA 297 Query: 288 RAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTK 347 A LGI + + + +I+ I GV+ + A +++ L +I+ + T + Sbjct: 298 TAQLGIQRAQVATLAEQHKTQKSILSLQIDTLEGVDPYEASTRITQLEAQIDATSSATAR 357 Query: 348 LQKLSILNYL 357 + KL + NYL Sbjct: 358 IAKLRLTNYL 367 >gi|119385425|ref|YP_916481.1| putative flagellar hook-associated protein [Paracoccus denitrificans PD1222] gi|119375192|gb|ABL70785.1| putative flagellar hook-associated protein [Paracoccus denitrificans PD1222] Length = 339 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 73/356 (20%), Positives = 129/356 (36%), Gaps = 26/356 (7%) Query: 5 GISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAE 64 I S ++ + L +L +EM++G SD LG + I E + Sbjct: 6 SIGDLSRSYQLRLGQNGLRTKLDRLTQEMISGVKSDIPKALGGDLAGISHIESRLQLLTT 65 Query: 65 RLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + S RL+T QA L + +V D +GP ++ + + A + + S Sbjct: 66 FQQNASEAQNRLTTMQAALEQVYGVVDD-LGPRLLSEPNISGEHDLRARADSTKQDFRSM 124 Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + N + GQYLF+G + PL SFD ML + Sbjct: 125 FSVLNTSIGGQYLFAGSRTDSAPLG-----------SFDVMLAELTSTVAGVT------- 166 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASD-HNIKYRIKDTEGIDVSANVNMRGI 243 A + D I D + +A+ D + ++ I ID S N + Sbjct: 167 ----TAADIADRIDAWFDAPAGMGGFADRIYQGDDNGSTRFSISPDRQIDKSLTANSTAL 222 Query: 244 RDIMFVAVIGT--EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 RD + I + L + + + +G +G+I +A LG + + + Sbjct: 223 RDTLKGMAIIAYASEAGAAIDTATLRDLFSEAGTRLLKGAAGLISAQADLGRQQAIVTQA 282 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + + IG + L KI+ Y IT +L +L++ +YL Sbjct: 283 QTRNSAETAALSIARTNLIGADPFETVTTLEETEAKIQSLYAITARLSRLNLTDYL 338 >gi|83955133|ref|ZP_00963789.1| flagellar hook-associated protein [Sulfitobacter sp. NAS-14.1] gi|83840462|gb|EAP79635.1| flagellar hook-associated protein [Sulfitobacter sp. NAS-14.1] Length = 359 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 145/358 (40%), Gaps = 7/358 (1%) Query: 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHI 62 + S+ + + ++ EE+ TG+ +D LG R S+++ + + Sbjct: 5 ISSFSSFQFNLFNRQNVQRTTLELQRVSEEVSTGKKADIYTDLGPRAASVMKLHGREANT 64 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + SN ++ +L A + + + VQ ++ L+ D N + R + E Sbjct: 65 QTFMTSNDVLASKLDAMLASVDAARTQVQSVLES--ALVNATRDGNGAEVLQMQARAALE 122 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAK---KSFDQMLQGFLEENSKSLLA 179 S V+ N + G+ LFSG+ S++ L + + +S + + G + S A Sbjct: 123 SLVSTMNTSYNGENLFSGLESNKTSLTRWPETSADTGRSPQSVVEEIFGAGPTDPASAQA 182 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 + N+Q + + S A I + + + N Sbjct: 183 IADQLEAVFNSQDADA--SRNFQGTFYQGSPERDASGAETKQISAWVNTGQEVVYGVRAN 240 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 + RD + + + A + +++ ++ G+++ A +G +++ + Sbjct: 241 DQSFRDAYKGLAMLAVTDVSQMDEAAYSTWMSEVVDSLSASQEGMLDISARIGFNQEIVE 300 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + L + + + T IS V+ + A ++++L +++ SY ++++L LSILNYL Sbjct: 301 KTQTQLTDLSLVQRTQISNYESVDPYEAITRMNSLETQLQASYQVSSRLSSLSILNYL 358 >gi|83944167|ref|ZP_00956623.1| flagellar hook-associated protein [Sulfitobacter sp. EE-36] gi|83845034|gb|EAP82915.1| flagellar hook-associated protein [Sulfitobacter sp. EE-36] Length = 359 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 142/356 (39%), Gaps = 3/356 (0%) Query: 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHI 62 + S+ + + ++ EE+ TG+ +D LG R S+++ + + Sbjct: 5 ISSFSSFQFNLFNRQNVQRTTLELQRVSEEVSTGKKADIYADLGPRAASVMKLHGREANT 64 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + SN ++ +L A + + + VQ ++ L+ + N + R + E Sbjct: 65 QTFMTSNDVLASKLDAMLASVDAARTQVQSVLES--ALVNATRNGNGAEVLQMQARAALE 122 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 S V+ N + G+ LFSG+ S++ L + + +S +++ + Q Sbjct: 123 SLVSTMNTSYNGENLFSGLESNKTSLTRWPETSADTGRSPQSVVEEIFGTGPTDPASAQA 182 Query: 183 LEVSSMNAQQMTDF-IKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 + D + + S A I + + + N + Sbjct: 183 IADQLETVFNSQDADASRNFQGTFYQGSPERDASGAETKQISAWVNTGQEVVYGVRANDQ 242 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 RD + + + A + +++ ++ G+++ A +G +++ + + Sbjct: 243 SFRDAYKGLAMLAVTDVSQMDEAAYSTWMSEVVDSLSASQEGMLDISARIGFNQQIVEKT 302 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + L + + + T IS V+ + A ++++L +++ SY ++++L LSILNYL Sbjct: 303 QTQLTDLSLVQRTQISNYESVDPYEAITRMNSLETQLQASYQVSSRLSSLSILNYL 358 >gi|296531744|ref|ZP_06894569.1| possible flagellar hook-associated protein [Roseomonas cervicalis ATCC 49957] gi|296267927|gb|EFH13729.1| possible flagellar hook-associated protein [Roseomonas cervicalis ATCC 49957] Length = 363 Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 73/370 (19%), Positives = 135/370 (36%), Gaps = 21/370 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M T +S S + L + L EM +G+ +D LG + + + + Sbjct: 2 MMTDRVSPSGVALGRQRDIARLQSELAVLTAEMSSGRKADPARALGVGASLLYKLYGDVQ 61 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +S SL +RL +Q L+S+ ++ M IL N + I A R+ Sbjct: 62 QGEAIRNSTSLAGQRLKAAQEALTSVGGLMDQMSPE--ILKTDALKGNGYTIIASNAREV 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYF-----------TKDSLAKKSFDQMLQGF 169 S N +GQ LF G +SS+ PL + A + D Sbjct: 120 LGSMTDLLNTHWDGQNLFGGTDSSQPPLAPSAGLLAWAQGRLGAAVTAAGGALDAAQATA 179 Query: 170 LEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDT 229 L ++ A + + + L + + A + SD RI Sbjct: 180 LIGQFDTMFANVQRDAAGATS------FYGLVYRSTSRTDMAGSSDPESDAPSLIRIGAG 233 Query: 230 EGIDVSANVNMRGIRDIMFVAVIGTEFL--SKNLTDGARNVLTKKMLSTVQQGLSGIIEQ 287 E + + + +D + + + L++ AR L + + G + + Sbjct: 234 ETLSWNVRADNAAFKDAFKSLALLSLLGAPASQLSEEARTTLLDEAGRLMGSGRAKLTVL 293 Query: 288 RAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTK 347 VLG + + + + I+ G + +T +++TL ++E +Y IT + Sbjct: 294 AGVLGGKQDRLEKVGEIQERAVAAATAQINDLEGADYYTVSDRINTLRIQLEATYSITAR 353 Query: 348 LQKLSILNYL 357 L +LS++NYL Sbjct: 354 LSELSLVNYL 363 >gi|294675566|ref|YP_003576181.1| flagellar hook-associated protein FlgL [Rhodobacter capsulatus SB 1003] gi|294474386|gb|ADE83774.1| flagellar hook-associated protein FlgL [Rhodobacter capsulatus SB 1003] Length = 338 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 131/360 (36%), Gaps = 26/360 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK + S M +L +L EE+VTG S D G ++G T++ ++ Sbjct: 1 MKYISVGDMSQTYLMRRHNVQLKTTMSRLSEEVVTGISQDLGTKVGGDFTALAAIDRSMV 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + T Q L ++Q Q + L+ + N A Sbjct: 61 RGEAYKQVAAETDLLAGTQQDALETIQGHAQAIGATLISASFASS-YNMIESGAQNAEQR 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +E+ V N+ G+Y FSG + KP+ T S + M Sbjct: 120 FEAVVDALNVNVAGRYAFSGTTTDTKPVASADTIISSLEAVVSGMTV------------- 166 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVN 239 A + + D + + + S +++ R+ +T+ ++ Sbjct: 167 ---------AADIIAAVDDWFDAAAGGGGFLDQGYLGSANSLSPVRLSETDSAQLTITAG 217 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTD--GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 IR+++ +GT + D R +L + + + RA LG E Sbjct: 218 DSSIRNMLKGFALGTLVARDLVPDNIETRALLIRTAGDRITSAEGEMTTLRAGLGTVEAI 277 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I++ + + ++ + IGV+++ L +++E Y +T++L +LS+ +YL Sbjct: 278 ISDAQTRNSAQVTALEIARKELIGVDEYETATALEATQSQLETLYTLTSRLTQLSLTDYL 337 >gi|254464892|ref|ZP_05078303.1| flagellar hook-associated protein FlgL family protein [Rhodobacterales bacterium Y4I] gi|206685800|gb|EDZ46282.1| flagellar hook-associated protein FlgL family protein [Rhodobacterales bacterium Y4I] Length = 335 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 67/346 (19%), Positives = 136/346 (39%), Gaps = 29/346 (8%) Query: 15 MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 + EL ++ L EE TG+SS+ +LG T + + E N I + +NS V Sbjct: 15 LRSRNTELKENVTTLSEEFATGKSSNLSERLGGDFTYLADLESSLNRIGSYMVANSEVRL 74 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG 134 +T+Q L + V+ M ++ L N + + S + N + G Sbjct: 75 FATTTQGSLDKVHSQVEAMRNDILRLSPALDTENAQQFGSQ-AKQRLASAINLMNTSVGG 133 Query: 135 QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 + +F+G + KPLN N+ +L+ EVS + Sbjct: 134 RTIFAGTATDTKPLN-----------------------NTSTLMTAVLAEVSGLTTSN-- 168 Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVNMRGIRDIMFVAVI- 252 D I++++D F D + S +++ + + E + + + ++ + VI Sbjct: 169 DIIQEVKDWFDDPAGFDAVMYRGSTTSLQPVTVGEGEQVTLGIRADDENLKHALQSYVIT 228 Query: 253 -GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + S L++ + L K S + + +I+ +A +G E + + Sbjct: 229 ALADEPSLGLSEDVQIDLVIKASSELTESADRLIDLQADVGFIEGQLEAVNTRNEASKTS 288 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +K + + + + +L ++E Y IT + +LS+L Y+ Sbjct: 289 LSIVKNKLVSADPYETYTRLQEAQTQLEGLYTITARSSQLSLLKYI 334 >gi|99082781|ref|YP_614935.1| flagellar hook-associated protein FlgL family protein [Ruegeria sp. TM1040] gi|99039061|gb|ABF65673.1| flagellar hook-associated protein [Ruegeria sp. TM1040] Length = 335 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 63/361 (17%), Positives = 143/361 (39%), Gaps = 30/361 (8%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + + + + ELN L +EM TG +S+ +LG + +++ E+ + Sbjct: 1 MHVQSFGDMAQYLFLRRRSVELNSTLDTLTQEMSTGIASNLPERLGGDLGFVVDLERSIS 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + ST+Q++L + + + ++ L D + A + Sbjct: 61 KMDSYKVAAQEAGLFASTAQSYLERINESALKLGSDILALSSTSNDTTSQEMAAQS-ENF 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 ++ N G+ LF+G ++S PL E+ +++ Sbjct: 120 LTETISNLNGKFSGRSLFAGTDTSVTPL-----------------------ESPNTMMTA 156 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVN 239 EV ++ + D + +ED F+D + N S ++ RI E ++ + + Sbjct: 157 LVAEVGALT--DVDDIFQAVEDWFNDPAGFDAIMYNGSTSSMSAVRIGANEEVNFALRAD 214 Query: 240 MRGIRDIMFVAVIG---TEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEK 296 ++ M +G +E +L+ + L K+ + + + + + ++ LG E Sbjct: 215 DERLKQAMQSFALGALASEDYLSHLSTVEASALVKRAGTELMNAQAELTDVQSDLGFVEA 274 Query: 297 NINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 I E +V + T ++ I + +++ + ++E Y IT + +L++LNY Sbjct: 275 RIEETQVRNTAALTTMGTTLNDLILADPAETASRVEEVQFQLEALYSITVRSSQLNLLNY 334 Query: 357 L 357 + Sbjct: 335 M 335 >gi|218507948|ref|ZP_03505826.1| flagellar hook-associated protein FlgL [Rhizobium etli Brasil 5] Length = 127 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 72/127 (56%) Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 I+ S N + G+R +V+ + L +NL+ A ++K+ +S + SG++ Q + Sbjct: 1 MIESSTNAHSEGMRYFALASVMTSALLGQNLSTDAMTTVSKQAISYTAKATSGLVTQASQ 60 Query: 291 LGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 LG+S++ + + L ++NII + GV+ + A + TL ++E +Y I +K+Q+ Sbjct: 61 LGLSQERVKKSNDALDAQSNIIKNKLVDLQGVDPYEASTLVKTLETQLETAYTIVSKIQQ 120 Query: 351 LSILNYL 357 LS++NYL Sbjct: 121 LSLVNYL 127 >gi|56695117|ref|YP_165464.1| flagellar hook-associated protein FlgL family protein [Ruegeria pomeroyi DSS-3] gi|56676854|gb|AAV93520.1| flagellar hook-associated protein FlgL family protein [Ruegeria pomeroyi DSS-3] Length = 335 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 57/360 (15%), Positives = 136/360 (37%), Gaps = 29/360 (8%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + + + + + L E+ TG+ +D +L + + + ++ Sbjct: 1 MAMNSLGDLAQNLMLRSYGARIRTEINTLTRELSTGKVADVTKRLRGDFSHLADMDRSLR 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ +N+ S SQ L +++ V D+ L+ + + + + Sbjct: 61 RLSAFATANAETRLLASASQTSLGIVEQTVTDLSDSLLSVSLSNQAVSHAQAGVK-AQGA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 E+ ++ N + G+ LF+G+ + + L S D ++ G +S L G Sbjct: 120 LETMISALNTSVGGRSLFAGVATDQTAL-----------ASADTLMAGL-----RSALTG 163 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVN 239 M A Q D F D +A SD ++ ++ + + ++ + Sbjct: 164 LSTPADIMQAAQ---------DWFDDPAGFAATVYTGSDQSLGSTQVSEDTKVSLNRRAD 214 Query: 240 MRGIRDIMFVAVIGT--EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 RD M +A + E + L+ + L +++ + G++ +A +G E Sbjct: 215 DPAFRDAMRLASVAALAEDPALGLSSTTKTALFEQIGVGLLGARDGVVTLQAEIGDVEGR 274 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I + + ++ + + + + +L + ++E Y T + +LS++N+L Sbjct: 275 IEKAATRNGAAKSGLELARGELLSADPYETAIRLEAVQFQLESLYTTTVRNSRLSLVNFL 334 >gi|163794164|ref|ZP_02188137.1| flagellar hook-associated protein [alpha proteobacterium BAL199] gi|159180778|gb|EDP65297.1| flagellar hook-associated protein [alpha proteobacterium BAL199] Length = 339 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 127/353 (35%), Gaps = 17/353 (4%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQL-GARVTSILEWEQEKNHIAE 64 IST + R++ + + +++ TG+ S G V ++ ++++ + Sbjct: 3 ISTVTQNLRIDNSITSIQRKIADAQQQISTGKKSQVYSGFSGQDVRLLVSLKEQRTSVQS 62 Query: 65 RLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + + + + +T A L + I QD+ + +EG DN+ + A + + Sbjct: 63 YVDTINNTKVKTTTIDASLVTFTDITQDLRKKMYEQVEGLFDNSSLAL-ATYANAAIDQL 121 Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N T GQ+LF+G ++ +PL + + + + Sbjct: 122 TNLLNQTSGGQFLFNGADTDTQPL---LSATASKAAYAAHVFGALGPGQPALSAGAGATD 178 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V I +ED FS D W NN + + +++ RI + N Sbjct: 179 V-----------IAFVEDFFSTDANW-NNVTAPAPGSLQARIDKGVDVSFGELGNDDAFE 226 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 ++ V + D L L V+ I + G+ + Sbjct: 227 EVFEVLYAFANANFQAGDDTEYQALVTWGLGKVEAAFDLINDMVGQNGVIGAQLETNLEA 286 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +++T + V+ + A + TL ++E S+ T L+ LS+ Y+ Sbjct: 287 HREGLTLLETQVLDIEDVDAYEAVSLFQTLQAQLESSFQTTALLRNLSLTKYI 339 >gi|260431758|ref|ZP_05785729.1| flagellar hook-associated protein FlgL family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260415586|gb|EEX08845.1| flagellar hook-associated protein FlgL family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 335 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 123/360 (34%), Gaps = 29/360 (8%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M I + + + E+ L EM TG+ +D ++G + +L+ +++ Sbjct: 1 MTMNAIGDLARGLTLRTRSTEIKTQIETLSHEMSTGKVADVSSRVGGDYSHLLDLDRKIA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + S Q L++ + ++ G L+ A R+ Sbjct: 61 QLDAFSIATSEARLFSDAMQQSLTTFSDSLAEISGSLLAF-GTSNQAVTHAQAADQARNE 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S ++ N G+ LF+G + PL S + +L + + Sbjct: 120 LDSMISALNTRAGGRSLFAGTATDAAPLE-----------SAETLLSALRTQLTGLTTLT 168 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVN 239 + E F+D + S+ + ++ +TE +++ N Sbjct: 169 DIRRAA--------------ETWFNDPAGFEAVMYRGSNTELAPMQVSETERVELPFTAN 214 Query: 240 MRGIRDIMFVAVIGTEFLSKNL--TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 +RD + + +L + L ++ + RA +G E Sbjct: 215 DPALRDALRDVAVAALATDPSLGWPPTLQTALFTELAVDLLNAQDKTTTIRAQVGAVEAR 274 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I + + ++ + + + A+L T+ ++E Y +T + LS++N+L Sbjct: 275 IEQAATRNSAAKTSFEYARNEIVAADPYETAAKLQTVQFQLESLYSVTVRNSNLSLVNFL 334 >gi|259417367|ref|ZP_05741286.1| flagellar hook-associated protein FlgL family protein [Silicibacter sp. TrichCH4B] gi|259346273|gb|EEW58087.1| flagellar hook-associated protein FlgL family protein [Silicibacter sp. TrichCH4B] Length = 335 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 143/361 (39%), Gaps = 30/361 (8%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + + + + ELNK L +EM TG +S+ +LG + +++ E+ + Sbjct: 1 MNVQSFGDMAQYLFLRRRSVELNKTLDTLTKEMSTGIASNLPERLGGDLGFVVDLERSIS 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + ST+Q++L + ++ ++ L D + + Sbjct: 61 KMDSYKVAAQEAGLFASTAQSYLERINDNALNLGSDILALSSTSNDTTTQEMATQSA-NF 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + N G+ LF+G ++S PL E++ +++ Sbjct: 120 LTETIANLNGKLSGRSLFAGTDTSSTPL-----------------------ESADTMMTA 156 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVN 239 EV ++ + D ++ +E+ F+D + N S +N+ RI E ++ + + Sbjct: 157 LIAEVGALT--DVDDIVQAVENWFNDPAGFDAIMYNGSTNNMSAVRIGANEEVNFALRAD 214 Query: 240 MRGIRDIMFVAVIG---TEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEK 296 ++ M +G + +L+ + L K+ + + S + + ++ LG + Sbjct: 215 DDRLKQAMQSFALGALASSDSLSHLSTVESSALIKRAGTELMNAQSELTDVQSDLGFIQA 274 Query: 297 NINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 I E + + T ++ I + +++ + ++E Y IT + +L++LNY Sbjct: 275 RIEETQTRNTAALTSMGTTLNDLILADPAETASRVEEVQFQLEALYSITVRSSQLNLLNY 334 Query: 357 L 357 + Sbjct: 335 M 335 >gi|126730123|ref|ZP_01745935.1| flagellar hook-associated protein FlgL family protein [Sagittula stellata E-37] gi|126709503|gb|EBA08557.1| flagellar hook-associated protein FlgL family protein [Sagittula stellata E-37] Length = 332 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 114/345 (33%), Gaps = 27/345 (7%) Query: 15 MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 + L ++ KL E+ TG + D G L +T + ++ + + + T Sbjct: 13 LRTNQVRLREEMDKLAVEVSTGFAKDPGQHLNGDLTGLQAIDRSLARLEAYRINTTEATF 72 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG 134 S+ Q L +Q + + L+ + ++ + N + G Sbjct: 73 LTSSMQTTLDEIQTRSEIVSQTLISAELTPNGP-LLKTMSEDAENALGQILNGLNRSVAG 131 Query: 135 QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 ++LFSG + + + G + A+ S + + Sbjct: 132 RFLFSGTATDRRAVQGIEDLLTDARASL----------------------AGATTMTDVE 169 Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIG- 253 + E SN + R+ +TE +V R+++ ++ Sbjct: 170 TALDTFFGAGGTYETVTYEGSNTGISPL--RLSETETANVDIRATDPVFREVLKPLIMAT 227 Query: 254 -TEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 S + + + + ++E RA LG E + E + Sbjct: 228 LATDASLGFSQDLQVEMLAASGRNLLGAQQNVVELRAGLGALEARVEETNTRNAAERTAT 287 Query: 313 DTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +GV+Q+ ++ ++ ++E Y IT + Q+LS+ +L Sbjct: 288 SMARLDLVGVDQYETASRYESIRAQLESLYAITVRSQRLSLAEFL 332 >gi|254476197|ref|ZP_05089583.1| flagellar hook-associated protein FlgL family protein [Ruegeria sp. R11] gi|214030440|gb|EEB71275.1| flagellar hook-associated protein FlgL family protein [Ruegeria sp. R11] Length = 335 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 129/347 (37%), Gaps = 31/347 (8%) Query: 15 MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 + + +L + L +E+ TG++S +LG +T + + E+ + + +N+ + Sbjct: 15 LRNRSVDLKNNISTLTQELSTGKTSQLTQKLGGDLTYLSDVERSLSRLKSFQVANTEASL 74 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG 134 S++Q +++ + + + + D+ I+ R + N G Sbjct: 75 FASSAQENITLLHDNAAKLTSDIFAVTTSPNDDTSRQISNQ-ARGYLTEAIRGLNGEIAG 133 Query: 135 QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 + LF G ++ KPL + T L+ EV+ + T Sbjct: 134 RSLFGGKDTETKPLESFDT-----------------------LMTNLVTEVAGLTTA--T 168 Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVNMRGIRDIMFVAVIG 253 D ++ +ED F+D + N S + ++ E + VS + + I Sbjct: 169 DIVQAVEDWFNDPAGFDAVMYNGSPDRMDPVKVGPNEEVTVSLLATDPAFKQTLMSLSIS 228 Query: 254 TEFLSKNLTDGA---RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 + LT +L + +++ +++ ++ LG E I + Sbjct: 229 SLVNEPALTLDTNLKFELLRSTGIE-LRESTDQLVQMQSDLGFIEGRIEQTSARNAAAET 287 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ + + + +L ++E + +T + +LS++ +L Sbjct: 288 SLSLVFNELVQADPYETATRLEEAQFQLESLFTVTARTSQLSLMRFL 334 >gi|149203102|ref|ZP_01880073.1| flagellar hook-associated protein FlgL family protein [Roseovarius sp. TM1035] gi|149143648|gb|EDM31684.1| flagellar hook-associated protein FlgL family protein [Roseovarius sp. TM1035] Length = 338 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 61/359 (16%), Positives = 125/359 (34%), Gaps = 26/359 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M I + + +L + +L E+ +G+++D G L + + + E E Sbjct: 3 MNFQSIGDLAQSFALRRQGVDLRQQLDRLGLELSSGRAADLGRHLSGNLLPLADIEHELV 62 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +A + QA L+ +Q + D + I+L + A + Sbjct: 63 LLAGHRTAAREAATDTEVMQAALARVQGVTTD-LATQAIILGTAGTTRQVSDLAATATQA 121 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 S + N G+ LFSG + PL T S + + Sbjct: 122 LGSLIGSLNTEVAGRALFSGAQTDTSPLAATETVLSEVRDAL------------------ 163 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 + + A ++ + D + + A+ + YR+ E + + + Sbjct: 164 ----IGATTAAEVKSRLDVFFDSPTGG-FLASIYQGGDSEVAPYRLGSGESVALDIRADH 218 Query: 241 RGIRDIMF--VAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 G+R + + ++ L G R L + + E RA LG +E I Sbjct: 219 AGLRAALKQVALIAVSDDAGLALALGDRISLASGAGVALLAHQDVLTEMRASLGQAENRI 278 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + V + + + + + V+ +L + ++E Y +T + +LS+LN+L Sbjct: 279 AQSAVRIAAEITSFEIARGELVSVDAFETAVELEQVQFQLESLYTVTARASRLSLLNFL 337 >gi|218678107|ref|ZP_03526004.1| flagellar hook-associated protein FlgL [Rhizobium etli CIAT 894] Length = 211 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 15/223 (6%) Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 + SN++V R+ SQ LSS++ +V + L + D + Sbjct: 1 AIDQATSFQSSNAVVELRMDASQTALSSLKDAGDSLVTNMTAL-QASQDTTSIAVTLQTA 59 Query: 118 RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSL 177 + ++ AN + G++LF+G N +PL + S A + Sbjct: 60 GATISQLISTANTSVNGEFLFAGTNLDSQPLTDQSSTTSDAIVTA-----------LGDY 108 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN---NWSNASDHNIKYRIKDTEGIDV 234 G +V+ + +++ FI + + W + WS AS ++ RI +E I Sbjct: 109 ATGLGKDVNELTGEEIGTFITDTVEPMFSESAWTDASSGWSTASSTDMTSRISSSETITS 168 Query: 235 SANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTV 277 S N N G+R + +V+ + S++L+ A++ + K + Sbjct: 169 STNANSEGMRYLALASVVVSALFSQDLSADAQSTVASKAIGYA 211 >gi|159045917|ref|YP_001534711.1| flagellar hook-associated protein FlgL [Dinoroseobacter shibae DFL 12] gi|157913677|gb|ABV95110.1| flagellar hook-associated protein FlgL [Dinoroseobacter shibae DFL 12] Length = 336 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 120/360 (33%), Gaps = 28/360 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M +T I + + L + L E+ TG+ D Q+ +++ E E Sbjct: 1 MTSTSIGDLAQSMATRMQMTRLKSNLNTLTTELSTGRKEDVAKQMRGEFSAVAALEGEMR 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ + + L +Q L+++ V D GP +L +D+ Sbjct: 61 ALSSYDVAVREGSLLLDAAQVALTNIYDQVVDA-GPDFLLTSEVSDSAMLKAAGQDAEQK 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + ++ N++ G+ +F G+ + PL A+ D++ + Sbjct: 120 LATVISSLNLSVAGRAIFGGVATDNPPLL-------SAEALLDELSTVVMGAA------- 165 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHN-IKYRIKDTEGIDVSANVN 239 Q I + + S + + E + S Sbjct: 166 --------TPQDTATLIDSWFND--AGGGFETVAYQGSPTAGLTIPVGPGETVSYSITAG 215 Query: 240 MRGIRDIMFVAVIGT--EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 + +RD++ S + A+ + + ++ + +A +G + Sbjct: 216 DQAVRDVLASFATAALVARGSFDGDPTAQAEMLEIAGQSMLNAEASFSVLQAEVGTQQSF 275 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + R + N +++ + + QL + ++E Y +T++L LS+ YL Sbjct: 276 LEDARERIDASLNAHQMALNELYSADPYEVATQLEAISLQLETLYAVTSRLSGLSMTEYL 335 >gi|254488064|ref|ZP_05101269.1| flagellar hook-associated protein [Roseobacter sp. GAI101] gi|214044933|gb|EEB85571.1| flagellar hook-associated protein [Roseobacter sp. GAI101] Length = 334 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 119/360 (33%), Gaps = 29/360 (8%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M T + + + L ++ +L +E+ TGQ +D L + I E E+ Sbjct: 1 MSPTSLGDLAQSFMLRHRNTALKQEMTRLTQELSTGQVADIRQALAGNYSYITELERNME 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ + + +Q L +++ + + L++ T + A R + Sbjct: 61 VLSAYQVATTEAQIFAEVTQTALGRYEEVGEKLANSLIVS-GTSTVGAQANDTAEEARVT 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 ++ N G+ +F G + T S + + Sbjct: 120 VSVLISTLNTKSAGRSIFGGTATDRPATASAETLLSELRAAI------------------ 161 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVN 239 ++ M E F D + S + ++ + E + Sbjct: 162 ----AGAVTPSDM---FAAAEAWFDDPAGFDTVIYQGSADALAPVQLTNRETVSFDTRAT 214 Query: 240 MRGIRDIMFVAVIGT--EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 ++D++ A + E S T + + +++ II +A G E Sbjct: 215 DPRLKDMLRFASLAALAEDPSLGFTGSQKGEVFVDAGTSLLGARDAIISLQARTGFVEAQ 274 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I + + S + V+ A +L + +++ Y +T ++ +LS++N+L Sbjct: 275 IEGISTRNAAEITSTEFEKSALLNVDPFEAATKLEDVQFQLQSLYSVTVRMSQLSLVNFL 334 >gi|85706144|ref|ZP_01037239.1| flagellar hook-associated protein FlgL family protein [Roseovarius sp. 217] gi|85669308|gb|EAQ24174.1| flagellar hook-associated protein FlgL family protein [Roseovarius sp. 217] Length = 336 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 120/359 (33%), Gaps = 26/359 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M I + + +L + +L E+ +G+ +D G L + + + E E Sbjct: 1 MTFQTIGDLAQSFALRRQGVDLRQQVDRLTLELSSGRVADLGHHLAGNLLPLADIEHELV 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ + S Q+ L +Q D + I L + + Sbjct: 61 LLSAHRTAAREAATDTSIMQSALDRVQTATTD-LATQAITLGTAGTTLQLSNVVVSANLT 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 S + N G+ LF+G + PL T S + + Sbjct: 120 LGSVIGALNSDVSGRALFAGARTERAPLGSSETLLSTLRSTL------------------ 161 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 + + ++ + D S + + Y++ E + + + Sbjct: 162 ----IGAATRSEVQVRLDAFFDGMSGGFQ-TAIYQGGTTGISPYQLGSGESVALDIRADD 216 Query: 241 RGIRDIM--FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 +RD + + + LT+ R L + + + RA LG++E I Sbjct: 217 PALRDALKHLALIAVSNDAGLPLTEADRLDLAAGAGVALIEHQDALTTLRANLGLAEARI 276 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + + + + S + + A +L + ++E Y +T + +L++LN+L Sbjct: 277 DQSASRISAEISGFEIARSGLVSSDPFEAAVELEQVQFQLETLYTLTARTARLNLLNFL 335 >gi|163742563|ref|ZP_02149949.1| flagellar hook-associated protein FlgL family protein [Phaeobacter gallaeciensis 2.10] gi|161384148|gb|EDQ08531.1| flagellar hook-associated protein FlgL family protein [Phaeobacter gallaeciensis 2.10] Length = 335 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 54/346 (15%), Positives = 124/346 (35%), Gaps = 29/346 (8%) Query: 15 MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 + + L D L +E+ TG++S +LG +T + + E+ + + +N+ Sbjct: 15 LRNRSVGLKNDISTLTQELSTGKTSQLTQKLGGDLTYLSDVERNLDRLKSFQVANTEAAL 74 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG 134 S+ Q ++ + V + G + + D ++ + N G Sbjct: 75 FASSMQNNIELISDNVVKLTGDIFAVTTSPNDETSQQLSNQ-AEVYLTEAIRSLNGEAAG 133 Query: 135 QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 + LFSG ++ +PL T S EV+ T Sbjct: 134 RSLFSGKDTEAQPLADLSTLMSSLVT-----------------------EVTPFTTA--T 168 Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVNMRGIRDIMFVAVIG 253 D ++ ++D F+D + + + +I TE + VS N + + I Sbjct: 169 DIVQAVKDWFADPLGFDTVMYQGASDLMDPVKIGPTEEVTVSLKANDDAFKQTLQSLAIA 228 Query: 254 TEFLSKNLT--DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 T L+ + + + +++ +I+ ++ LG E I + Sbjct: 229 TLVNDPGLSLTSDVKFEMLRSTGVELRESQVQLIQMQSDLGFVEGRIEQTATRNGAAQTS 288 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ + + + +L ++E + +T + +LS++ +L Sbjct: 289 LSLVFNELVQADPYETSTRLDEAQFQLESLFTVTARTSQLSLMRFL 334 >gi|163738041|ref|ZP_02145457.1| flagellar hook-associated protein K [Phaeobacter gallaeciensis BS107] gi|161388657|gb|EDQ13010.1| flagellar hook-associated protein K [Phaeobacter gallaeciensis BS107] Length = 335 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 123/346 (35%), Gaps = 29/346 (8%) Query: 15 MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 + + L D L +E+ +G++S +LG +T + + E+ + + +N+ Sbjct: 15 LRNRSVGLKNDISTLTQELSSGKTSQLTQKLGGDLTYLSDVERNLDRLKSFQVANTEAAL 74 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG 134 S+ Q ++ + V + G + + D ++ + N G Sbjct: 75 FASSMQNNIELISDNVVKLTGDIFAVTTSPNDETSQQLSNQ-AEVYLTEAIRSLNGEAAG 133 Query: 135 QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 + LFSG ++ +PL T S EV+ Sbjct: 134 RSLFSGKDTEAQPLADLNTLMSSLVT-----------------------EVTPFTTAP-- 168 Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVNMRGIRDIMFVAVIG 253 D ++ ++D F+D + + + +I TE + VS N + + I Sbjct: 169 DIVQAVKDWFADPLGFDTVMYQGASDLMDPVKIGPTEEVTVSLKANDDAFKQTLQSLAIA 228 Query: 254 TEFLSKNLT--DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 T L+ + + + +++ +I+ ++ LG E I + Sbjct: 229 TLVNDPGLSLTSDVKFEMLRSTGVELRESQVQLIQMQSDLGFVEGRIEQTATRNGAAQTS 288 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ + + + +L ++E + +T + +LS++ +L Sbjct: 289 LSLVFNELVQADPYETSTRLDEAQFQLESLFTVTARTSQLSLMRFL 334 >gi|218674574|ref|ZP_03524243.1| flagellar hook-associated protein FlgL [Rhizobium etli GR56] Length = 124 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 70/124 (56%) Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI 293 S N N G+R + +V+ + ++L+D A++ + K + Q SGI+ Q++ LG+ Sbjct: 1 SSTNANSDGMRYLALASVVVSALFGQDLSDDAKSTVASKAIGYAAQATSGIVTQQSQLGL 60 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 S++ + + L +++++ + GV+ + A ++ L ++E +Y + +KLQ LS+ Sbjct: 61 SQERLEKADDALDAQSSLLQGKLVDLQGVDTYEASTLVNQLQTQLETAYTLVSKLQSLSL 120 Query: 354 LNYL 357 +NYL Sbjct: 121 VNYL 124 >gi|126738559|ref|ZP_01754264.1| flagellar hook-associated protein FlgL family protein [Roseobacter sp. SK209-2-6] gi|126720358|gb|EBA17064.1| flagellar hook-associated protein FlgL family protein [Roseobacter sp. SK209-2-6] Length = 334 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 63/352 (17%), Positives = 135/352 (38%), Gaps = 29/352 (8%) Query: 9 SSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHS 68 S+ + ELN+D L +EM TG+ SD +LG + + + E I ++ + Sbjct: 9 LSMHAFLQNRNAELNRDIATLSKEMSTGKKSDLTAELGGDFSFLADIEDNLKRIDSQIVA 68 Query: 69 NSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFA 128 + + Q LS V++M L+ L T + + R S + Sbjct: 69 ANETELFAISMQGSLSRAHNGVREMRDDLLSL-STLTTPVEAERFSDQGRQELASTIGAF 127 Query: 129 NMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSM 188 N G+ LF+G + PLN S D ++ + EVS + Sbjct: 128 NTWSGGRSLFAGTATGTSPLN-----------SADTLMTELVG------------EVSGL 164 Query: 189 NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVNMRGIRDIM 247 + D I+ ++D F D + S ++ I D + +S + ++ + Sbjct: 165 T--DVADIIQAVKDWFDDPTGFDTAMYVGSTTDVSPVEIGDGDSASLSIRADDERLKHAL 222 Query: 248 FVAVIGTEFLSKN--LTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 I + ++D + + + S + +I +A +G E+ ++ + Sbjct: 223 QSFAILSLVNEPGVTISDQTKVDIVRASASELADSDLKLISAQADVGFVEEQLDRAKTRN 282 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + ++ + + + ++ N++E+ Y +T + +LS++N+L Sbjct: 283 EASKTSLSLAFNEIVLSDPYETTSRFEASQNQLEILYTVTARSSRLSLVNFL 334 >gi|254510421|ref|ZP_05122488.1| flagellar hook-associated protein FlgL family protein [Rhodobacteraceae bacterium KLH11] gi|221534132|gb|EEE37120.1| flagellar hook-associated protein FlgL family protein [Rhodobacteraceae bacterium KLH11] Length = 335 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 125/360 (34%), Gaps = 29/360 (8%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M I + + + E+ L EM TG++ D +L + +L+ ++ + Sbjct: 1 MTLNSIGDLARGLTLRTRSTEIKSQIETLSYEMSTGKAQDISGRLDGDYSHLLDLDRNLD 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + Q L++ + +M L+ +A R+ Sbjct: 61 RLEAFSVATAEARLFTDAMQLSLTTFSDSLAEMSAALLSFGTSNQAVTHTQASAQ-ARNE 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 ++ ++ N G+ LFSG + PL + +LL Sbjct: 120 LDTMISSLNTRTGGRSLFSGTATDVSPL-----------------------PPADTLLTA 156 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVN 239 E++ + + TD + E+ F+D + + + +I + E IDV Sbjct: 157 LQAELTGLTSA--TDIRQAAENWFNDPTGFDAMIYQGNATALAPMQISENEQIDVPITAT 214 Query: 240 MRGIRDIMF--VAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 ++ + + L + L ++ + + RA +G +E Sbjct: 215 DPALKAALRDVAVAALASEDALALAPEVQTALFTELGVNLANTQDETVNLRAQVGAAEAR 274 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + ++ I + + A+L T+ ++E Y +T + LS++N+L Sbjct: 275 VEQAATRNAAAKTSTEHARNELIAADPYETAARLQTVQFQLESLYSVTVRNANLSLVNFL 334 >gi|23005491|ref|ZP_00048278.1| COG1344: Flagellin and related hook-associated proteins [Magnetospirillum magnetotacticum MS-1] Length = 127 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 64/126 (50%) Query: 232 IDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVL 291 + SA+ N R + V+ + + ++ A+ T K++ + QG SG+ +A L Sbjct: 1 MTTSASANAEPFRKLAMAYVVASAIGLPSFSNEAQEAATGKVMELLSQGSSGLTAMQADL 60 Query: 292 GISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 G S+ I + + ++ ++ I V+ A +++ + +++MSY +T +L+ L Sbjct: 61 GRSQSRITDANERMTKQSALLTGQIHDLESVDPAEAKSRVDAITTQMQMSYGLTAQLRSL 120 Query: 352 SILNYL 357 S++N+L Sbjct: 121 SLINFL 126 >gi|310816850|ref|YP_003964814.1| flagellin and related hook-associated protein [Ketogulonicigenium vulgare Y25] gi|308755585|gb|ADO43514.1| flagellin and related hook-associated protein [Ketogulonicigenium vulgare Y25] Length = 333 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 126/357 (35%), Gaps = 25/357 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M T +S ++ + L E+ +G++ D QLG R + Sbjct: 1 MAFTPLSDLGRHFANQQANVQMRERLAILTAEVASGEAHDLPAQLGTRANQFAAHDYRLG 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 IA + SL+ +L+ +Q+ L ++ + + + +I + + + A R+ Sbjct: 61 MIASYSKAGSLMATQLAAAQSALENI-DLQRSTISTQLIAISPQATQVELSAGAEAARNG 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + ++ N G LF+G + A S D ML + Sbjct: 120 FAQLISALNTQIGGVTLFAGT-----------ASGAPATASADVMLSAIETYIGGA---- 164 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 + + + I + + + N+ +I + + + Sbjct: 165 -------VTVSDVQNGIAEWFADIFPTD--PAEGYQGNTQNMGRQIDKDLSVALDVRADD 215 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 + ++ + A+ L K + SG+ E RA +G++E+ + + Sbjct: 216 PVVMQLLQDLATAAIADRLGFSGVAQAQLLNKAGEGLITQASGLTEVRARVGLAEQTLAQ 275 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + L + + T + V+ A L + +++E+ Y +T +L L++ NYL Sbjct: 276 SQTRLAAEKTSLGTARNDLAQVDTFEAATALQAVSDQLELHYTLTARLAALTLTNYL 332 >gi|304321122|ref|YP_003854765.1| flagellar hook-associated protein FlgL family protein [Parvularcula bermudensis HTCC2503] gi|303300024|gb|ADM09623.1| flagellar hook-associated protein FlgL family protein [Parvularcula bermudensis HTCC2503] Length = 329 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 112/342 (32%), Gaps = 34/342 (9%) Query: 18 LTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLS 77 + ++ ++ +E VTG+ D LG+R + + I S+ + RLS Sbjct: 20 AIQTSRQELDRVSQEFVTGRVKDLVSSLGSRAGEYNTITKAIDDIDRAGSRLSITSNRLS 79 Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 L S++ + + ++ + R ES T N G+ L Sbjct: 80 QIDIALKSVRTTIGEF-ETRALVDTQINGEVGRSQTSATARSHLESVFTSLNSQQGGRAL 138 Query: 138 FSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFI 197 F+G + + L T + + + + I Sbjct: 139 FAGDDVTGVALTDVETFLASVEAA--------------------------LGGATDQATI 172 Query: 198 KQLEDKFSDDEY-WANNWSNASDHNIKY-RIKDTEGIDVSANVNMRGIRDIMFVAVIGTE 255 F D + + D R+ D +D S + I+ ++ Sbjct: 173 DTTITAFFADGGTFDTSIYTGGDGEAASVRLPDGAVVDYSIKADDPSIKTLVEGLTRLA- 231 Query: 256 FLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 L + + + G +GI +A +G ++ + ++ Sbjct: 232 ----FLPADVDTPYVENAATQIVSGKTGIASLQADVGRQTNLVSLAEGLAAEEKRLLQEN 287 Query: 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +G++ A + + L +++ +Y +T +L +LS+LN L Sbjct: 288 ENALVGIDPFEAASNVQRLEVQLQAAYQLTARLGRLSLLNVL 329 >gi|255262565|ref|ZP_05341907.1| flagellar hook-associated protein FlgL family protein, putative [Thalassiobium sp. R2A62] gi|255104900|gb|EET47574.1| flagellar hook-associated protein FlgL family protein, putative [Thalassiobium sp. R2A62] Length = 336 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 68/359 (18%), Positives = 126/359 (35%), Gaps = 26/359 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M T I S +L + +E+ TGQ SD L + + +Q Sbjct: 1 MTMTSIGDRSQAFFNRQHNFDLRSRLNQFTQELSTGQVSDPSSHLAGDFSRLGSVDQAIA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 L + + Q L S+Q V ++ + + D+ ++ Sbjct: 61 RNNSYLQNMTQKDILFDHVQLSLGSIQDRVLELEISARSVDLDQQDS-AIARIGKNAENA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +++ V N T GQ +FSG + A ++ +L G E A Sbjct: 120 FDAIVGKLNETRLGQSVFSGNATD-----------KPATQTAAVILDGLRSELPLGATAT 168 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V F +F + S ++ I E +D V+ Sbjct: 169 DVQQVVD------EWFDTGPTGRFYSE------IYTGSKNSAPISISSIEKVDPLPKVDD 216 Query: 241 RGIRDIMFVAVIGT--EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 IR + ++ S L + L + + + G+I+ AV G S++ I Sbjct: 217 DAIRHTLKGVIMIALTNQPSSKLGRSEKLDLIGAAVEPLGKATIGLIDMSAVAGSSQERI 276 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +E L +N + Y +K + +Q + L + ++E Y +T +L +LS++ YL Sbjct: 277 AQETSRLNAENTSMGIYRNKMVSADQFETASNLQQVQLQLETHYTVTARLSRLSLVGYL 335 >gi|89067519|ref|ZP_01155032.1| flagellar hook-associated protein FlgL family protein [Oceanicola granulosus HTCC2516] gi|89047088|gb|EAR53142.1| flagellar hook-associated protein FlgL family protein [Oceanicola granulosus HTCC2516] Length = 333 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 122/337 (36%), Gaps = 28/337 (8%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 T ++ +L +E+ TG+ +D L L T + E + +N + Sbjct: 19 TVQVKDRLHRLSDELSTGKVADVALALHGETTRVSHLEHRIALADSHVSANRETGGLFAQ 78 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 +Q L ++ + + V+ L + ++ A R+++ES V N G+ LF Sbjct: 79 AQLVLGKIED-RRAALTEQVLSLPANSTRDQRESVAAAARETFESIVGDLNHRVGGKSLF 137 Query: 139 SGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 +G + L + D +L L + + A + Sbjct: 138 AGEATDRAAL-----------AAPDVLLNDLLAAVAGASGA--------------DQLLD 172 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYR-IKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 ++ F D + + R + D +SA +M +R ++ A +G Sbjct: 173 AVDAWFDDPAGFESRGYLGDPAAYLNRPLGDGTSATLSARADMPALRGLLKAAALGALAA 232 Query: 258 -SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYI 316 S L A + + + + + + LG+ E I + + + + Sbjct: 233 ASPGLGARAADAVLRHSGVLLASAAQPLALAQGSLGLQEDRIEQASAQQAAERSSLAILQ 292 Query: 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ + + L ++ ++EMS+M+T +L +LS+ Sbjct: 293 NELTSADPYATATALQSVEIQLEMSFMLTARLSRLSL 329 >gi|110677961|ref|YP_680968.1| flagellar hook-associated protein [Roseobacter denitrificans OCh 114] gi|109454077|gb|ABG30282.1| flagellar hook-associated protein [Roseobacter denitrificans OCh 114] Length = 334 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 128/359 (35%), Gaps = 31/359 (8%) Query: 4 TGISTSSIFER--MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 + +S + + M + L +D +L +E+ +GQ SD L + E+ Sbjct: 2 SSVSLGDLSQAFMMQRRSVALRQDMTRLTDELSSGQVSDIKEVLAGNHNYLSGLERSLET 61 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + +NS Q+ L +Q + L++ G + + Sbjct: 62 LQGFSVANSEAKYFTDAMQSSLDRVQDFSGQLGLDLLLASGGPVGVIAGSP-SENAKTQL 120 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 + + N G+ LF+G + PL EN+++LL Sbjct: 121 QGILNSLNADIAGKSLFAGAATDRVPL-----------------------ENAETLLTEL 157 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVNM 240 + ++ D + E+ F+D + S + + +TE + + N Sbjct: 158 SIAIAGQTTPD--DIMTAAENWFADPAGFDTLIYTGSGTALAPFSLSETERVSLDVRAND 215 Query: 241 RGIRDIMFVAVIGT--EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 + ++D++ + + + LT + L + ++ + + R+ +G +E I Sbjct: 216 QALKDVLMNVAVAALTDDPALGLTVPQQAELFGTVGLGLKSNQDQLTDLRSRIGFTEARI 275 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 Q + + + + + QL + +++ Y +T + +LS++N+L Sbjct: 276 EMIDARNQAEQTSTEVARNALLLADPFETATQLENVQFQLQALYSVTVRSSQLSLVNFL 334 >gi|163735545|ref|ZP_02142977.1| flagellar hook-associated protein [Roseobacter litoralis Och 149] gi|161391165|gb|EDQ15502.1| flagellar hook-associated protein [Roseobacter litoralis Och 149] Length = 321 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 125/346 (36%), Gaps = 29/346 (8%) Query: 15 MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 M + L +D KL EE+ +GQ SD L + E+ + +NS Sbjct: 2 MQRRSVALRQDMTKLTEELSSGQVSDIKEVLAGNHNYLSGLERSLETLNGYSVANSEAKY 61 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG 134 Q+ L +Q + L++ G + + E + N G Sbjct: 62 FTGAMQSSLDRVQDFSGQLGLDLILAGGGPVGVIAGSP-SENAKTQLEGILNSLNADIAG 120 Query: 135 QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 + LF+G + + PL E++++LL + ++ Sbjct: 121 KSLFAGAATDQVPL-----------------------ESAETLLTELRIALAGQTTPD-- 155 Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVNMRGIRDIMFVAVI- 252 D + E+ F+D + S + + +TE I + N +++++ A + Sbjct: 156 DIMTAAENWFADPAGFDALIYTGSATALAPFSLSETERISLDVRANDPALKNLLMNAAVS 215 Query: 253 -GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + + LT ++ L + +Q + + R+ +G +E I Q + Sbjct: 216 ALADDPTLGLTVPQQSELFRTAGLGLQSNQDQLTDLRSRIGFTEARIEMIASRNQAEETS 275 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + + QL + +++ Y +T + +LS++N+L Sbjct: 276 TEVARNALLLADPFETATQLENVQFQLQALYSVTVRSSQLSLVNFL 321 >gi|260428885|ref|ZP_05782862.1| flagellar hook-associated protein [Citreicella sp. SE45] gi|260419508|gb|EEX12761.1| flagellar hook-associated protein [Citreicella sp. SE45] Length = 333 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 116/346 (33%), Gaps = 28/346 (8%) Query: 15 MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 + LN++ +L E+ +G D LG +T +L ++ + + + + Sbjct: 13 LRTHQTRLNQEMDRLGVEIASGFVRDPASHLGGDITGLLAIDRTLAQLETYRVNTTEASF 72 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG 134 T Q L +Q +++ L+ + D + + + N + G Sbjct: 73 LTGTMQNALEEIQIRAENVSQVLLSVELTPNDE-MLNTMSSEAESALNQMLNGLNRSVGG 131 Query: 135 QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 ++LFSG + + + T N +V+ + A Sbjct: 132 RFLFSGTATDGRAVIDSDT-----------------MLNELRTTLAGQTDVAGVEAA--- 171 Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVNMRGIRDIMFVAVIG 253 + D + + S ++ R+ TE +V + + RD M Sbjct: 172 --LDAWFD--TAGGGFETTGYLGSTTSLAPMRLSKTESANVDIRADDQVFRDTMKALAKA 227 Query: 254 TEFLSKNLT--DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 +L + + L +Q + ++E R+ LG ++ I E + Sbjct: 228 ALATDSSLALPENVKVELIGNAALDLQTAQAHMVELRSGLGALQQRIEETATRNSAERAA 287 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +G +Q + ++E Y IT + ++S++ +L Sbjct: 288 TTIARVELVGTDQFETATRYENTRAQLESLYAITVRSSRMSLVGFL 333 >gi|114798459|ref|YP_758979.1| putative flagellar hook-associated protein FlgL [Hyphomonas neptunium ATCC 15444] gi|114738633|gb|ABI76758.1| putative flagellar hook-associated protein FlgL [Hyphomonas neptunium ATCC 15444] Length = 325 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 129/341 (37%), Gaps = 34/341 (9%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 S S NI V +E VTGQ +D LG R+ + ++ I + Sbjct: 8 SIVSASFSQNIADMRARATIV--SQESVTGQYADLTKHLGGRIGDAMISDKALLDIEHQR 65 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + RL +Q L+ +Q+ + + ++ L G D + + + + + Sbjct: 66 GLLGVREGRLDLTQQSLAGVQERISGLEVQMLTAL-GVGDVPGKDLVSRDAKAALSDVFS 124 Query: 127 FANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS 186 N ++LFSG ++ +P + DQ+L + S + Sbjct: 125 ALNSRHGDRFLFSGDETATQPFSN-----------TDQLLADIRQIASTA---------- 163 Query: 187 SMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI 246 ++A + + W + D + + + + I + Sbjct: 164 -IDAADFEVQLDDYFQSPTG--GWQTSIYGG-----TSLTSDQDSVTATDPAIVEIISGL 215 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 +A+ G+ LTD + ++ + G S ++ RA +GI ++ + + + L Sbjct: 216 AVMAISGSADNLTLLTD--FPEIVRESAERIGTGTSALVNLRADVGIIQERVAKAKEALD 273 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTK 347 + I+++ + +G +Q+ A ++L L +E +Y++T++ Sbjct: 274 TEETILNSVHNNIVGRDQYDAASELKQLEASLEAAYVLTSR 314 >gi|146278771|ref|YP_001168930.1| hypothetical protein Rsph17025_2738 [Rhodobacter sphaeroides ATCC 17025] gi|145557012|gb|ABP71625.1| hypothetical protein Rsph17025_2738 [Rhodobacter sphaeroides ATCC 17025] Length = 333 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 119/359 (33%), Gaps = 28/359 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + + + L D+ +L E++TG ++D ++G + + + Sbjct: 1 MSAVSLGDLARTFMLRRQNVALKADAQRLSTEVITGLAADTRRKVGGDLAVLNSMDSSLA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +A R + S Q L+ M + + L+ L G + D+ Sbjct: 61 LLAARSSITTETAMTASAMQTALAQMDGVASGLSLDLLSLTPG-GSSTTIDQLGEQAEDA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + S V+ N + +F G A L G L+ + + Sbjct: 120 FRSAVSALNTQVGDRSIFGGTR------------PQAAAVMDADALLGLLDTVAAGAASA 167 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 ++ + I D + A D + + + + N Sbjct: 168 ADVQTA----------IGNWFDSPAGYAGLAYG---GGDVLAPVTVGSGKKVTLGVTAND 214 Query: 241 RGIRDIMFVAVIGTEFLSKNLT--DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 +R+ + + L R L + + QG ++ A LG +E I Sbjct: 215 PALRETLKGLAMAAMLNRGALAGASADRAELAQIAGKVLVQGHGERVDLAARLGRTEARI 274 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + +G++++ A ++L +++E Y +T +L +LS+ +YL Sbjct: 275 EQAASAAAAEATALKIARKDLLGIDEYEAASRLQATQSQLETLYSLTARLSRLSLTDYL 333 >gi|114762175|ref|ZP_01441643.1| flagellar hook-associated protein FlgL family protein [Pelagibaca bermudensis HTCC2601] gi|114545199|gb|EAU48202.1| flagellar hook-associated protein FlgL family protein [Roseovarius sp. HTCC2601] Length = 334 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 54/346 (15%), Positives = 113/346 (32%), Gaps = 28/346 (8%) Query: 15 MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 + LN+D +L E+ TG D LG V+S++ ++ + + + Sbjct: 13 LRTHQTRLNRDLDQLGTEIATGFVRDPVSHLGGDVSSLVSIDRRLAQLETYRVNTTEAAF 72 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG 134 T Q L +Q + + L+ L D F + ++ + N + G Sbjct: 73 LTGTMQTTLDEIQTRSELLSQVLLALELTPNDE-MFRTLSTEAGNALGHMLNGLNRSVAG 131 Query: 135 QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 ++LFSG + + + L G + Sbjct: 132 RFLFSGTATDTPAV----IEGEAMIAELQTALAGAT------------------TVTDVE 169 Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVNMRGIRDIMFVAVIG 253 + + + + S ++ ++ TE V + RD+M Sbjct: 170 TALDDWFNTP--GGGFETDGYLGSTTSLAPLQLSATESAGVDIRGDDAVFRDVMKAMAKA 227 Query: 254 TEFLSKNL--TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 L + + L +Q ++ ++E RA LG E+ I E + Sbjct: 228 ALASDDTLTLSGAVKVDLISSAALDLQTAMASMVELRAGLGTVEQRIEETTARNAAERTA 287 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +G +Q + +++E Y IT + ++S++ +L Sbjct: 288 TSIARLELVGTDQFETATRYENTRSQLESLYAITVRSSRMSLVEFL 333 >gi|83595980|gb|ABC25340.1| flagellin and related hook-associated protein [uncultured marine bacterium Ant24C4] Length = 326 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 116/337 (34%), Gaps = 25/337 (7%) Query: 22 LNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQA 81 L L ++ +G+ SD G T + + S + LST+Q Sbjct: 13 LKTALNSLTGQLSSGEVSDKVKASGGDTTRFNAIDNRLKVLDSFSQSIKETQQTLSTTQV 72 Query: 82 HLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGI 141 L + M G L++++ +D + + R+S++ V+ N + LFSG Sbjct: 73 LLDNFDSKRDAMTGSLLLVIPDSSDF-QIEEASRAARNSFDGLVSTLNTRLGDESLFSGT 131 Query: 142 NSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLE 201 S+ L S A D + Q G + + + A + + Sbjct: 132 AVSQAALT------SPAVMLADIVTQ-----------IGGSTDFNVITAT-VDTWFDDPA 173 Query: 202 DKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVI-GTEFLSKN 260 F Y + + + + I + + GI+ ++ AV+ Sbjct: 174 GGFLTLGYQGDLGEKP-----ERHLDNDTRIKLGVRADDAGIKAVLKGAVLAVVGQELLG 228 Query: 261 LTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 L + L + +Q + + + +G E + + ++ + + + Sbjct: 229 LDKRTQAALLFEGGLQLQSAADDLAQVKGRIGHFEGEVERIAISQSSEISALSMARNLIT 288 Query: 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +L + ++E Y +T +L +LS++ YL Sbjct: 289 QADPFEVATELKAVQLQLETHYAMTARLSRLSLVEYL 325 >gi|77464883|ref|YP_354387.1| putative flagellar hook-associated protein [Rhodobacter sphaeroides 2.4.1] gi|77389301|gb|ABA80486.1| putative flagellar hook-associated protein [Rhodobacter sphaeroides 2.4.1] Length = 333 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 122/359 (33%), Gaps = 28/359 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + + + L D +L E+VTG ++D + G ++++ + Sbjct: 1 MSAVSLGDLARTFLLRRQNAALKADVQRLSTEVVTGVAADVHQKTGGDLSALQAIDGSLT 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +A R + S Q L+ + + DM L+ + T + ++ Sbjct: 61 VLAARASATGEAASIASALQTGLARLDGLASDMSMKLLSVGNNATAMTTDQLG-EEAEEA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + V N + +F+G + + T + D ++ G Sbjct: 120 FRTAVATLNTRVGDRSIFAGTRPQQAAVLDADT----ILTALDTVIAGAT---------- 165 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 A + I+ D D ++ I E + + + Sbjct: 166 --------TAADVQTAIEAWFD---DPSGYSALAYTGGGRPASVTIATGETVALEVTADS 214 Query: 241 RGIRDIMFVAVIGTEFLSKNLT--DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 IRD + + L+ R L ++ S + QG + ++ A LG +E I Sbjct: 215 SAIRDSLKGLALAAMLNRGALSGAPSERVSLGERAGSALLQGQTARVDLGARLGRAEARI 274 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + + + +G +++ L ++E Y +T +L ++S+ +YL Sbjct: 275 HSATISNAAEVTSLQMARKELLGTDEYETATLLKATQAQLETLYNLTVRLSQMSLTDYL 333 >gi|260574382|ref|ZP_05842386.1| flagellar hook-associated protein FlgL family protein [Rhodobacter sp. SW2] gi|259023278|gb|EEW26570.1| flagellar hook-associated protein FlgL family protein [Rhodobacter sp. SW2] Length = 334 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 112/359 (31%), Gaps = 28/359 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + + + L L E+ TG +SD G Q + + + + Sbjct: 1 MTLVSLGDMAQSFMLRRQNAALKAQLQTLSTEVTTGIASDTGRQTRGDLAPLSAIDASLS 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + S Q LS+++++ + L+ E D R Sbjct: 61 RLDAYGAATSESGLFTEAMQTALSTIEEMAAEFGPALLQTAESSLDV-SISNIGNTARQK 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +E+ + N + LF+G ++ L + D + G + Sbjct: 120 FETTIATLNARVGDRSLFAGQATNGPAL----ANSETILAALDTAILGAV---------- 165 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +A + I D D +A+ I E ++ Sbjct: 166 --------SATDVATAISTWFD---DPAGYASVAYQGDASLSPLAIAAGESAEIKVTAMD 214 Query: 241 RGIRDIMFVAVIGTEFLSKNL--TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 +R+ + + L + +R L + + + A LG+ E I Sbjct: 215 PAVRETLKGFAMAAMLDRGALAGSPESRADLARLAGEKLVGTATDRAYLAADLGVVEGQI 274 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + + V+ + +L + ++E Y IT +L +LS++++L Sbjct: 275 ESAKARNGAETTALQIARLGIVSVDPYDTATKLESTQTQLETLYTITARLSRLSLMDFL 333 >gi|126734125|ref|ZP_01749872.1| flagellar hook-associated protein FlgL family protein [Roseobacter sp. CCS2] gi|126716991|gb|EBA13855.1| flagellar hook-associated protein FlgL family protein [Roseobacter sp. CCS2] Length = 326 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 121/337 (35%), Gaps = 25/337 (7%) Query: 22 LNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQA 81 + + +L E + +G+ +D L + + L S + L Q Sbjct: 14 IKSELFELAESLSSGKVADLTKSLNGDTARFSGVQYSLTQLDGYLQVASETEQTLGNIQI 73 Query: 82 HLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGI 141 L+ + V L +L+ + + A + S+E VT N + L SG Sbjct: 74 ILNKVDNTRARTVESL-LLVNESSTTAQVDEAARASQSSFEEMVTALNTRIADRALMSGN 132 Query: 142 NSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLE 201 + + PL + D ML G G L+ +++ A + + Sbjct: 133 SVNTTPL-----------VAADDMLAGLQTA------IGASLDPATIIAT-VDTWFNDPA 174 Query: 202 DKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF-LSKN 260 F+ A + + I+ R+ + + I + A + ++ ++ A + + Sbjct: 175 GGFA-----ATGYQGDTGGPIERRVTEDQSIRIDARADDPAVKQVLQGAALAALADMLPG 229 Query: 261 LTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 L A+ L S + S ++ +A +G +E ++ + + + + Sbjct: 230 LDRAAKVDLLTNAASQLYGSASSLVAVQARVGFAENSVARAQTETGAQQTTLRQVANDLS 289 Query: 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++L ++E + +T +L +LS+L ++ Sbjct: 290 LADPFETASRLQAQQTQLETFFSLTARLSQLSLLRFI 326 >gi|89056666|ref|YP_512117.1| flagellar hook-associated protein FlgL family protein [Jannaschia sp. CCS1] gi|88866215|gb|ABD57092.1| hypothetical protein Jann_4175 [Jannaschia sp. CCS1] Length = 336 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 51/359 (14%), Positives = 116/359 (32%), Gaps = 26/359 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M S ++ F+ + + D +L E+ +G+ +D G L +++ + + Sbjct: 1 MSIATYSDAAQFQLLRRDATQHRADLARLTSELSSGRVADLGQALQGDYSTLSDITRSLR 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + S S + Q+ L + ++ L+ + G + + Sbjct: 61 LNTTFITSVSEAAIAVGVRQSALERVASELEGYGSSLLAV-TGAGSLSDIQLKLADAPAR 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 ++ V N G+ LFS ++ S + ML + +L A Sbjct: 120 FDQAVDSLNTRLAGRSLFS-----------ADDPNATPLISSEDMLAELRTVAAGALDAA 168 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 + + F+ Y W + I + + + Sbjct: 169 TAVADVT------AWFMDT------GGGYETLAWQGGTGDPPPVLIGEGQSAETGVTALN 216 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARN--VLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 IR+ + + + + V + S +I RA LG E + Sbjct: 217 PAIRETLASLALAVLASEEVPASAEQEKRAFVASAAEQVLRAESNLIGLRARLGTEEARV 276 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + RV + + + + + + +L + ++E Y++T ++ +LS+ YL Sbjct: 277 EDARVTAEATRASLQIEYGRLVEADPYDTATELEAISLRLESLYIVTARVSRLSLTEYL 335 >gi|218658935|ref|ZP_03514865.1| flagellar hook-associated protein FlgL [Rhizobium etli IE4771] Length = 110 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 58/110 (52%) Query: 224 YRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSG 283 RI ++E I+ S N N G+R +V+ + L +NL+ A ++K+ +S + SG Sbjct: 1 SRISNSEVIESSTNANSEGMRYFALASVMTSALLGQNLSTDAMTTVSKQAISYTAKATSG 60 Query: 284 IIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLST 333 ++ Q + LG+S++ + + L ++NII + GV+ + A + T Sbjct: 61 LVTQASQLGLSQERVKKSNDALDAQSNIIKNKLVDLQGVDPYEASTLVKT 110 >gi|126463725|ref|YP_001044839.1| putative flagellar hook-associated protein [Rhodobacter sphaeroides ATCC 17029] gi|126105389|gb|ABN78067.1| putative flagellar hook-associated protein [Rhodobacter sphaeroides ATCC 17029] Length = 333 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 122/359 (33%), Gaps = 28/359 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + + + L D +L E+VTG ++D + G ++++ + Sbjct: 1 MSAVSLGDLARTFLLRRQNAALKADVQRLSTEVVTGLAADVRQKTGGDLSALQAIDGSLT 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +A R + S Q L+ + + DM L+ + T + ++ Sbjct: 61 VLAARASATGEAASIASALQTGLARLDGLASDMSMKLLSVGNNATAMTTDQLG-EEAEEA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + V N + +F+G + + T + D ++ G Sbjct: 120 FRTAVATLNTRVGDRSIFAGTRPQQAAVLDADT----ILTALDTVIAGAT---------- 165 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 A + I+ D D ++ I E + + + Sbjct: 166 --------TAADVQTAIEAWFD---DPSGYSALAYTGGGRPASVTIATGETVALEVTADS 214 Query: 241 RGIRDIMFVAVIGTEFLSKNLTD--GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 IRD + + L+ R L ++ S + QG + ++ A LG +E I Sbjct: 215 SAIRDSLKGLALAAMLNRGALSGALSERVSLGERAGSALLQGQTARVDLGARLGRAEARI 274 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + + + +G +++ L ++E Y +T +L ++S+ +YL Sbjct: 275 HSATISNAAEFTSLQMARKELLGTDEYETATLLKATQAQLETLYNLTVRLSQMSLTDYL 333 >gi|221640804|ref|YP_002527066.1| flagellar hook-associated protein [Rhodobacter sphaeroides KD131] gi|221161585|gb|ACM02565.1| flagellar hook-associated protein precursor [Rhodobacter sphaeroides KD131] Length = 333 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 123/359 (34%), Gaps = 28/359 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + + + L ++ +L E+VTG ++D + G ++++ + Sbjct: 1 MSAVSLGDLARTFLLRRQNAALKAEAQRLSTEVVTGLAADVRQKTGGDLSALQAIDGSLA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +A R S Q LS + + DM L + + ++ Sbjct: 61 VLAARASVTGEAASIASALQMGLSRLDGLASDMSIKL-LSVGNNATATTTDQLGEEAEEA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + V NM + +F+G + + T + D ++ G Sbjct: 120 FRTAVATLNMRVGDRSIFAGTRPQQAAVLDADT----ILTTLDAVIAG------------ 163 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 A D +E F D ++ I + E + + + Sbjct: 164 ---------ASTAADVQTAVEAWFDDPADYSALAYTGGSRPASVMIANGESVALEVTADS 214 Query: 241 RGIRDIMFVAVIGTEFLSKNLT--DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 +RD++ + L+ R L++ S + QG + ++ A LG +E I Sbjct: 215 GAVRDLIKGLALAAMLNRGALSGAPSERASLSELAGSALLQGQTTRVDLEARLGRAEARI 274 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + + + +G +++ L ++E Y +T ++ ++S+ NYL Sbjct: 275 HSATISNAAEATSLQMARKELLGTDEYETATLLKATQAQLETLYNLTARISQMSLTNYL 333 >gi|332559782|ref|ZP_08414104.1| FlgL2 [Rhodobacter sphaeroides WS8N] gi|332277494|gb|EGJ22809.1| FlgL2 [Rhodobacter sphaeroides WS8N] Length = 333 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 122/359 (33%), Gaps = 28/359 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + + + L D L E+VTG ++D + G ++++ + Sbjct: 1 MSAVSLGDLARTFLLRRQNAALKADVQLLSTEVVTGLAADVRQKTGGDLSALQAIDGSLT 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +A R + S Q L+ + + DM L+ + T + ++ Sbjct: 61 VLAARASATGEAASIASALQTGLARLDGLASDMSMKLLSVGNNATAMTTDQLG-EEAEEA 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + V N + +F+G + + T + D ++ G Sbjct: 120 FRTAVATLNTRVGDRSIFAGTRPQQAAVLDADT----ILTALDTVIAGAT---------- 165 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 A + I+ D D ++ I E + + V+ Sbjct: 166 --------TAADVQTAIEAWFD---DPSGYSALAYTGGGRPASVTIATGETVALEVTVDS 214 Query: 241 RGIRDIMFVAVIGTEFLSKNLTD--GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 IRD + + L+ R L ++ S + QG + ++ A LG +E I Sbjct: 215 SAIRDSLKGLALAAMLNRGALSGALSERVSLGERAGSALLQGQTARVDLGARLGRAEARI 274 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + + + +G +++ L ++E Y +T +L ++S+ +YL Sbjct: 275 HSATISNAAEVTSLQMARKELLGTDEYETATLLKATQAQLETLYNLTVRLSQMSLTDYL 333 >gi|296534170|ref|ZP_06896662.1| possible flagellar hook-associated protein [Roseomonas cervicalis ATCC 49957] gi|296265506|gb|EFH11639.1| possible flagellar hook-associated protein [Roseomonas cervicalis ATCC 49957] Length = 354 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 107/354 (30%), Gaps = 23/354 (6%) Query: 17 ILTKELNKDSVKLHEEMVTG-QSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKR 75 + L +L ++ +G Q ++ LG + E R Sbjct: 11 VSALRLQDRFTELTRQVSSGGQRAESYAGLGRDAARASSLAAQMAQRGELQAVAERGEGR 70 Query: 76 LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQ 135 + +Q + + I M L + R + + T N EG+ Sbjct: 71 AAYTQTVMDRLAGIAGQMADSAASL---NGTMSSLSQIRENARLALQEVSTLLNERYEGE 127 Query: 136 YLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTD 195 +F G + P+ + + M G G ++ + Sbjct: 128 AIFGGSDLQNDPVV------APQQMLKTGMFTGIGALLDDYGSQGGDIDALFGQMTALAT 181 Query: 196 FIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI------------ 243 FS A A + GI++ N Sbjct: 182 SNADGVSPFSSYANAAAEGGVADSRRAVP-TGNGTGIEIGLYANRNAAVGETGSTTGAWS 240 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 RD++ + + G + L +K + ++ +G ++ LG ++ ++ Sbjct: 241 RDLIMGLTVLANLTEEQAAQGNFSTLVQKTVGLLRDAGNGANDEIGALGTAQSRLSAAAS 300 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + ++T + ++ A +L + +++ SY L ++S++NYL Sbjct: 301 QHKAVYDQVETQLGDLTTIDIAEAQVRLQQVNLQLQGSYQALAMLGRVSLVNYL 354 >gi|218671599|ref|ZP_03521269.1| flagellar hook-associated protein FlgL [Rhizobium etli GR56] Length = 73 Score = 97.1 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 43/72 (59%) Query: 286 EQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMIT 345 Q + LG+S++ + + L ++NII + GV+ + A + TL ++E +Y I Sbjct: 2 TQASQLGLSQERVKKSNDALDAQSNIIKNKLVDLQGVDPYEASTLVKTLETQLETAYTIV 61 Query: 346 TKLQKLSILNYL 357 +K+Q+LS++NYL Sbjct: 62 SKIQQLSLVNYL 73 >gi|296283219|ref|ZP_06861217.1| flagellin, putative [Citromicrobium bathyomarinum JL354] Length = 301 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 100/360 (27%), Gaps = 66/360 (18%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T ++T + M + ++ K + TG+ + LG + Sbjct: 2 TRVATIPLQRTMADAIQRAQQNLAKTQTSLSTGKKAQDYAGLGTEAVRTMSARSMLAKQE 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + + VT L+ AH++ + + D+ + + + + ++ ++E Sbjct: 62 AQAVVSKHVTTSLAIYDAHVTGLDNTLIDLRTRMATAIGTEDSSG----LQETIKGAFEQ 117 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 F + N + G LF G + P D A + D Sbjct: 118 FRSSLNAKEGGIPLFGGSRTDVLPFAPESLADVAATPASDAFRND--------------- 162 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM--- 240 D + + + + Sbjct: 163 -----------------------------------DVRAVAHLSEGTSVTYGITASDLGA 187 Query: 241 ---RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 R + IG A+ + L + G G+ A G + Sbjct: 188 EIYEAFRTLAAAGPIGERL------TDAQKTALQDALVQIDTGSVGLRAANAENGRKQAR 241 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + ++ ++ I+ + + L+ +E SY + +L +L++ YL Sbjct: 242 VETLGERAEQRSLVLSDIIAANEDADLGQVAVDLAQQKATLEASYSVFAQLSQLNLTKYL 301 >gi|114569243|ref|YP_755923.1| flagellin [Maricaulis maris MCS10] gi|114339705|gb|ABI64985.1| flagellin, putative [Maricaulis maris MCS10] Length = 304 Score = 93.2 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 106/354 (29%), Gaps = 52/354 (14%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T +ST + + + + K +++ TG+ + +G + ++ Sbjct: 2 TRVSTFAANQSALMDLMKAQKAVFDAQKQLTTGKLATDLKGVGHQAETLSATRAALQRAD 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + RL + + M + D+ + + +R+++ + Sbjct: 62 AYEEAAIRTEARLESQDVAMGRMADAITDLRLAVT--------SKDGDYTMHQVREAFNA 113 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 N G Y+F G + P++ D +A S + N + Sbjct: 114 IANSLNTQHAGTYVFGGTRTDTPPVSTNDLNDLVAMGSASEAFV----NNDRRPQVQLDQ 169 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 ++ +D ++ D F RI D A N Sbjct: 170 NLTIETGMLASDVGGEVFDSF-------------------KRI-----ADFDAGANGPFG 205 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 R + A+ + V L I + G ++ N+ + Sbjct: 206 RPL----------------SAAQETFLNGEIQNVITALDNIYTKIGENGAAQANVETVKN 249 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + +S V+ A + +++S + L ++S+LN+L Sbjct: 250 SHSDRQVFLQQMLSDLEDVDMAEAATRFQAAQTALDVSAKTFSSLSQVSLLNFL 303 >gi|77165831|ref|YP_344356.1| flagellin-like [Nitrosococcus oceani ATCC 19707] gi|254433202|ref|ZP_05046710.1| flagellar hook-associated protein 3 [Nitrosococcus oceani AFC27] gi|76884145|gb|ABA58826.1| Flagellin-like protein [Nitrosococcus oceani ATCC 19707] gi|207089535|gb|EDZ66806.1| flagellar hook-associated protein 3 [Nitrosococcus oceani AFC27] Length = 400 Score = 92.8 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 67/398 (16%), Positives = 132/398 (33%), Gaps = 46/398 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ISTS ++ K +++ +G+ +LE + A+ Sbjct: 3 ISTSLFQQQSIDGMLRQQAQVSKTQQQIASGERMQTPADDPIAAARLLEVREASGRTAQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + T RLS + L+ + ++Q + V G +N I A +R V Sbjct: 63 QTNADRATARLSQEENALAGVNNVLQGVRELAVQANNGAQNNENRAIIAQEVRQRLNELV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL----------NGYFTKDSLAKKSFDQMLQGFLEENS 174 AN D G+YLF+G +P + S E Sbjct: 123 GLANSQDASGEYLFAGAKGRSQPFIQEGGSVSYQGDQAQRLISIGPSVQVADSHSGSEVF 182 Query: 175 KSLLAGQHLEVSSMNAQQMTDFIKQL--EDKFSDDEYWANNWSNAS-DHNIKYRIKDTEG 231 ++ G + + N + + + + +S A+ D + Y++ D++ Sbjct: 183 LAIREGNGVFATEANPSNTGSGVIAPGSVNGAFIPDNYTLQFSQATPDDPLTYQVLDSQN 242 Query: 232 IDV----------------------------SANVNMRGIRDIMFVAVIGTEFLSKNLTD 263 V S ++ RD+ +A E L + + D Sbjct: 243 TVVANGGFASGEEITFGGAQVSITGIPADGDSFTLHASAHRDMFTIAQHFIEALERPIND 302 Query: 264 GARNVLT----KKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKS 319 A + L+ + Q + I+E R +G ++ ER + + + S Sbjct: 303 TASQARFHNDMNRALTDLDQAMGKILEVRTEVGTRLNAVDRERQVNEEASLQLAREQSSL 362 Query: 320 IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A +L+ + +E + +LQ LS+ N+L Sbjct: 363 NDLDLAEAIGRLNQQLTGLEAAQRTYARLQGLSLFNFL 400 >gi|144900939|emb|CAM77803.1| flagellin and hook associated protein [Magnetospirillum gryphiswaldense MSR-1] Length = 300 Score = 92.1 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 96/352 (27%), Gaps = 55/352 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +S++ + + + + + +G S+ LGA ++ E + R Sbjct: 4 VSSAGLGQALLRSAMTVQAKLAEKQSANASGLKSETYAGLGADAARLMTMENALAGLQAR 63 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + R T + M ++ M L L TD + + D Sbjct: 64 SSTTQSALDRTETMHQAVGDMTDLLSSMRTTLSQLSSQSTDQVDYN---QIGADMLTDLA 120 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N +G+YLF+G ++ +P++ D Sbjct: 121 ALMNTQADGRYLFAGGATTTQPVDTTLLATPTNPSVADDSY------------------- 161 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 D ++ D I+ G Sbjct: 162 -----------------------------YLGDDVTQSVKVSDQSSIEYGVTAGETGFEK 192 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 + A I + + + + + ++ + L ++ + Sbjct: 193 ALRAANILANLDPATPDEDS----ISEAYDLATEAMDQLLAVQGRLSVNAGRLENALSQQ 248 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +++ I + GV+ ++S +E SY KL L + ++L Sbjct: 249 DTGISLLSERIGDAKGVDVAQVTVEISQYQTTLEASYAALGKLNSLKLTDFL 300 >gi|209545590|ref|YP_002277819.1| flagellar hook-associated protein FlgL [Gluconacetobacter diazotrophicus PAl 5] gi|209533267|gb|ACI53204.1| putative flagellar hook-associated protein [Gluconacetobacter diazotrophicus PAl 5] Length = 358 Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 132/336 (39%), Gaps = 1/336 (0%) Query: 22 LNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQA 81 + ++ + E T S+ LG ++ + + +A + + LS Sbjct: 24 MTQEQQTISWETSTDTLSETYAGLGQARSAAISLAPQITQVAAWQTNVTNAQNSLSVQAD 83 Query: 82 HLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGI 141 L+ + + Q + L+ + G T ++ AG + T N +D Y+F+G Sbjct: 84 ALTQIVSLAQSLSTSLIGV-TGTTTDSAVTATAGEATTALSELATVLNTSDGSGYVFAGK 142 Query: 142 NSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLE 201 +S+E P+ + S + + L + S + Q ++ N + F QL Sbjct: 143 DSTEPPIEDTASVTSGTLATQIASIVSSLGSSDASTVIEQATTAAADNTAGTSVFSSQLS 202 Query: 202 DKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNL 261 + S+ + + I T+G S IRD+M +I + + Sbjct: 203 VSGDAATALQKSVVTGSNTSTEVGIVATQGTAASLTSTGSPIRDLMRDMMIVSGTSGMSS 262 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 T + L ++ S++Q +S + + + +G ++ N+ L + N + + + Sbjct: 263 TTSGYSDLVSQVYSSLQTTISQLTDMESSVGTTQDNLTANATLLTSMNTALTGQLGDARD 322 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + Q S+L ++ SYM+ + ++ L++ NY+ Sbjct: 323 ADLAAVAVQSSSLDTSLKASYMLVSDMKSLTLANYI 358 >gi|162147481|ref|YP_001601942.1| flagellar hook-associated protein FlgL [Gluconacetobacter diazotrophicus PAl 5] gi|161786058|emb|CAP55640.1| putative flagellar hook-associated protein [Gluconacetobacter diazotrophicus PAl 5] Length = 358 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 132/336 (39%), Gaps = 1/336 (0%) Query: 22 LNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQA 81 + ++ + E T S+ LG ++ + + +A + + LS Sbjct: 24 MTQEQQTIAWETSTDTLSETYAGLGQARSAAISLAPQITQVAAWQTNVTNAQNSLSVQAD 83 Query: 82 HLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGI 141 L+ + + Q + L+ + G T ++ AG + T N +D Y+F+G Sbjct: 84 ALTQIVSLAQSLSTSLIGV-TGTTTDSAVTATAGEATTALSELATVLNTSDGSGYVFAGK 142 Query: 142 NSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLE 201 +S+E P+ + S + + L + S + Q ++ N + F QL Sbjct: 143 DSTEPPIEDTASVTSGTLATQIASIVSSLGSSDASTVIEQATTAAADNTAGTSVFSSQLS 202 Query: 202 DKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNL 261 + S+ + + I T+G S IRD+M +I + + Sbjct: 203 VSGDAATALQKSVVTGSNTSTEVGIVATQGTAASLTSTGSPIRDLMRDMMIVSGTSGMSS 262 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 T + L ++ S++Q +S + + + +G ++ N+ L + N + + + Sbjct: 263 TTSGYSDLVSQVYSSLQTTISQLTDMESSVGTTQDNLTANATLLTSMNTALTGQLGDARD 322 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + Q S+L ++ SYM+ + ++ L++ NY+ Sbjct: 323 ADLAAVAVQSSSLDTSLKASYMLVSDMKSLTLANYI 358 >gi|253681497|ref|ZP_04862294.1| flagellar hook-associated protein 3 [Clostridium botulinum D str. 1873] gi|253561209|gb|EES90661.1| flagellar hook-associated protein 3 [Clostridium botulinum D str. 1873] Length = 345 Score = 89.8 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 117/352 (33%), Gaps = 10/352 (2%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ + + ++ K+ ++ +G+ V ++ + N + Sbjct: 3 VTNKMLSNNFLADMRANLENVNKIQQQNTSGKKFRKPSDDPFAVARSMQLHTDINTNKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + V+ L T+ L ++Q + L+ G ++ + + Sbjct: 63 SKNITDVSNWLDTTDTALGQAGNVLQRVRELLITSGNGGYTKSERRAIKDEINEKIGEMS 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N G Y+F G S+ KP++ D + ++ ++ + + Sbjct: 123 QILNTNFSGNYIFGGTRSTTKPMDVSKNDDGNVSLN-------YISKDGRQYNIDNSKKP 175 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + A F K L + + + + Y + T+ ++ + Sbjct: 176 IQIEAVDKKPFDKTLVEDEYNQVTSRLKVEVSQGVTMDYNVTATDVLEFKNEAGDSI--N 233 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 +M + T L L + L+ V +S +++ RA +G + I Sbjct: 234 LMNLFKDITTHLDSEDPKEINK-LIGEDLTKVSDTISNLLKIRAEVGAKQNRIEGAEDRN 292 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + +SK V +T++ S + K+ + S+++YL Sbjct: 293 KDGTFNMTKILSKHEDVNYTENMTNYATMLTVYMASLQTSAKIIQPSLMDYL 344 >gi|254698187|ref|ZP_05160015.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 2 str. 86/8/59] Length = 102 Score = 89.4 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 48/100 (48%) Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 L A + LT + L Q ++ ++ LG+++ + + I++ + Sbjct: 2 DIGLNASAFDALTTQALQITTQAVTETTSEQTTLGLAQSRTEAATTRIAAQQKILNQSVL 61 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V+ + A +++ L +IE SY +T +LQ +S+LNYL Sbjct: 62 NLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSLLNYL 101 >gi|328545571|ref|YP_004305680.1| flagellin and hook associated protein [polymorphum gilvum SL003B-26A1] gi|326415312|gb|ADZ72375.1| Flagellin and hook associated protein [Polymorphum gilvum SL003B-26A1] Length = 298 Score = 89.0 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 105/352 (29%), Gaps = 59/352 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T S E + + + + +G+ + LG +++ E Sbjct: 5 VATFSHAESLLQHAMQTQARLAQKQIQQASGEIASSYAGLGTGGEALVSLEVAATRAGSY 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 L S R+ + + +M ++ + + G ++ + E Sbjct: 65 LSSAQTTLDRVEMMYSAVGAMSD----LLTRMRAEVAGTMTVDQISDLQSVAAGLLEDMA 120 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 + N EG+YLF+G + P+ + + Sbjct: 121 SQLNTQFEGRYLFAGSLTGSAPV-----------------------------VLDGYQAT 151 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 S A + D RI T +D + Sbjct: 152 SLATAD--------------------AGYYQGDDLLQSARIGATRVLDYGVTGDATAFET 191 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 + V +L + ++ + + + GII ++ L + Sbjct: 192 ALRVLSYVATADPLDLDE------LSEVAALLVEAQDGIIALQSGLATKAATLEATIEAE 245 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ IS GV+ A+++TL +++ SY KL +S+L+YL Sbjct: 246 STYIATLEEMISARKGVDAVVVAAEIATLETQLQASYAAIGKLSSMSLLDYL 297 >gi|268317788|ref|YP_003291507.1| flagellar hook-associated protein 3 [Rhodothermus marinus DSM 4252] gi|262335322|gb|ACY49119.1| flagellar hook-associated protein 3 [Rhodothermus marinus DSM 4252] Length = 310 Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 44/340 (12%), Positives = 106/340 (31%), Gaps = 53/340 (15%) Query: 18 LTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLS 77 +E + +L E+M TG+ + T + + + ++ L+ Sbjct: 22 QIQERRLELARLQEQMATGRRVNRPSDDPGTYTRSQALRRLAQRYDQHERTLTIGRAWLT 81 Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 ++ LS++ + V + A +L ++ + N G+YL Sbjct: 82 ATEDALSTLVDLFNSAYEEGVRMATDTASTADRATTADVLEQRLQAVLDQLNARHNGEYL 141 Query: 138 FSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFI 197 F+G ++ +P + L+ L G + N +TDF Sbjct: 142 FAGTRTTMQPFQLSGGTVVYNGNDQTRQLEIAPGLQIAVNLTGNDVWEVDENGDGVTDF- 200 Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 + E W + + Sbjct: 201 -------TITEAWQD---------------------------------------LIDALR 214 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 + + + ++ V+ ++++ A +G + + ++ LQ+ +++ S Sbjct: 215 ADDTAQ------IQNAMARVETARDHLLDRIAQVGETSRRLSMAETELQDARLRLESQRS 268 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +L +E + +T++L + S+LNYL Sbjct: 269 DLEDADFAEIAVKLQRHQLSLEATLQVTSRLLQTSLLNYL 308 >gi|300114792|ref|YP_003761367.1| flagellar hook-associated protein 3 [Nitrosococcus watsonii C-113] gi|299540729|gb|ADJ29046.1| flagellar hook-associated protein 3 [Nitrosococcus watsonii C-113] Length = 400 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 65/398 (16%), Positives = 125/398 (31%), Gaps = 46/398 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ISTS ++ K ++ +G+ +LE + A+ Sbjct: 3 ISTSLFQQQSIEGMLRQQTQVSKTQRQIASGERMQTPADDPVAAARLLEVREASGRTAQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L T RLS + L+ + ++Q + V G +N I A +R V Sbjct: 63 QTNADLATARLSQEENALAGVNNVLQGVRELAVQANNGAQNNENRAIIAQEVRQRLNELV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL----------NGYFTKDSLAKKSFDQMLQGFLEENS 174 AN D G+YLF+G +P + S E Sbjct: 123 GLANSQDASGEYLFAGAKGRTQPFIQAGGGVSYQGDQAQRLISIGPSAQVADSHSGSEVF 182 Query: 175 KSLLAGQHLEVSSMNAQQMTDFIKQL--EDKFSDDEYWANNWSNAS-DHNIKYRI----- 226 ++ G + + N + + + +S A+ D + Y++ Sbjct: 183 LAIREGNGVFATEANPVNRGSGVIAPGSANGAFIPGNYTLQFSQATPDDPLTYQVLDSQH 242 Query: 227 ----------------KDTEGIDVSANVNMRGI-------RDIMFVAVIGTEFLSKNLTD 263 + + RD+ +A E L + + D Sbjct: 243 TVVANGDFASGEEIAFGGAQASITGVPADGDSFTLRASAHRDMFTIAQHFIEALERPIND 302 Query: 264 GARNVLT----KKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKS 319 K L+ + Q + ++E RA G ++ ER + + + S Sbjct: 303 TTSQARFHNDMNKTLTDLDQAMGKVLEVRAETGARLNAVDRERQVNEETSLQLAREQSSL 362 Query: 320 IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A +L+ + +E + +LQ LS+ N+L Sbjct: 363 NDLDLAEAIGRLNQQLTGLEAAQRTYARLQGLSLFNFL 400 >gi|118443899|ref|YP_877946.1| flagellar hook-associated protein 3 [Clostridium novyi NT] gi|118134355|gb|ABK61399.1| flagellar hook-associated protein 3, putative [Clostridium novyi NT] Length = 325 Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 120/353 (33%), Gaps = 32/353 (9%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ + K ++ K+ ++ +G+ V ++ + N + Sbjct: 3 VTNKMLSNNFLADMKTNLENINKIQQQNTSGKKFRKPSDDPFAVARSMQLHTDINTNKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + V+ L T+ L ++Q + L+ G ++ + + Sbjct: 63 SKNITDVSNWLDTTDTALGQAGNVLQRVRELLISSGNGGYTKSERRAIKDEINEKIGEMS 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N G Y+F G S+ KP+ + N ++L E Sbjct: 123 QILNTNFGGNYIFGGSRSTTKPME-------------------VDKANGNTILIYNKKEG 163 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM-RGIR 244 ++ + D Q+ K + + Y + T+ ++ + +R Sbjct: 164 GKLDKTKDQDEYTQIASKLKIEVS--------QGVTMDYNVTATDVLEFKNEAGAPKDLR 215 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 DI ++ I + S+ N L + L+ + +S +++ RA +G + I Sbjct: 216 DI--LSKITSHLDSEK--PEEINKLIGQDLTNITDAISNVLKIRAEIGAKQNRIEGANDR 271 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + +SK V +T++ S + K+ + S+++YL Sbjct: 272 NKDATFNMTKILSKHEDVNYTENMTDYATMLTVYMASLQTSAKIIQPSLMDYL 324 >gi|39933726|ref|NP_946002.1| flagellar hook-associated protein FlgL [Rhodopseudomonas palustris CGA009] gi|39647573|emb|CAE26093.1| possible flagellin and hook associated protein [Rhodopseudomonas palustris CGA009] Length = 303 Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 101/357 (28%), Gaps = 55/357 (15%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M ++T + +M + +L + G S+ GA ++ + Sbjct: 1 MTVMRVATFAQSGQMIADALRVQSRMAELQIQEAAGVKSESFAGYGADAQHVVNLQVGVT 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +L ++ + S+ IV + L G T I + Sbjct: 61 RAQSYIDAATLAGGKVQVMYSAAGSIADIVTQLRSQLSAASTGSTTEATSAI--SSAQQM 118 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + N +GQY+F+G +S P++ S + Sbjct: 119 LQQVGSLLNTQYDGQYVFAGSKTSTPPVDLSSFASSAGSTTTAD---------------- 162 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 ++ D R+ + + N + Sbjct: 163 -------------------------------TSYYVGDDATTSVRVSADQSVAYGVNADN 191 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 +M V S + + A L L + LG + I Sbjct: 192 SAFEQVMRVLRYVANSSSLSSSQIA------TALDLASSALDATASVQERLGNAASAIEN 245 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + T S V+ A+LST +++ SY K+ L++ +YL Sbjct: 246 ASARQSDYKSFASTLASDLTSVDVAAVTAELSTYQSQLTASYSAIGKIFSLNLASYL 302 >gi|83859395|ref|ZP_00952916.1| flagellin, putative [Oceanicaulis alexandrii HTCC2633] gi|83852842|gb|EAP90695.1| flagellin, putative [Oceanicaulis alexandrii HTCC2633] Length = 303 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 46/358 (12%), Positives = 111/358 (31%), Gaps = 63/358 (17%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST + + +++ +++ +G+ + +I+ + + Sbjct: 3 ISTQAASQAALSDLMRAQREAYDARQQLASGKKAPDLKGYANSAETIIAAKAAQKRSESF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + +N V RL + D+ L N +++ ++ Sbjct: 63 VGANERVLNRLEIQDLAYQELSTAATDLRTALTT--------NDGSFMMDKVQEVFDRAS 114 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 NM G ++F G + P ++ + L +V Sbjct: 115 AALNMRFNGSFVFGGRRTDAVPFT----------------------ADTIADLQAAVPDV 152 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 S + NA+D I++T IDV+A + G + Sbjct: 153 S-------------------------ATFQNAADRQTTK-IEETITIDVNATASEVGT-E 185 Query: 246 IMFVAVIGTEFLSKNLT------DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 +M +F + + + L+ + I A G +K + Sbjct: 186 LMASIERIADFNAGPDGPFDGQITENQQAFLETELANIISAFDTINVAMAENGARQKQLE 245 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +++ ++ ++ + A + +++S ++L ++S+LNYL Sbjct: 246 GSITGHEKRSDYLEIMVAGIEDADMAEAATRFQQAQTAVQVSAQTFSRLSQISLLNYL 303 >gi|192289146|ref|YP_001989751.1| flagellar hook-associated protein FlgL [Rhodopseudomonas palustris TIE-1] gi|192282895|gb|ACE99275.1| flagellar hook-associated protein FlgL [Rhodopseudomonas palustris TIE-1] Length = 303 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 100/357 (28%), Gaps = 55/357 (15%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M ++T + +M + +L + G S+ G ++ + Sbjct: 1 MTVMRVATFAQSGQMIADALRVQSRMAELQIQEAAGVKSESFAGYGTDAQHVVNLQVGVT 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + +L ++ + S+ IV + L G T I + Sbjct: 61 RAQSYIDAATLAGGKVQVMYSAAGSIADIVTQLRSQLSAASTGSTTEATSAI--SSAQQM 118 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + N +GQY+F+G +S P++ S + Sbjct: 119 LQQVGSLLNTQYDGQYVFAGSKTSTPPVDLSSFASSAGSTTTAD---------------- 162 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 ++ D R+ + + N + Sbjct: 163 -------------------------------TSYYVGDDATTSVRVSADQSVAYGVNADN 191 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 +M V S + + A L L + LG + I Sbjct: 192 SAFEQVMRVLRYVANSSSLSSSQIA------TALDLASSALDATASVQERLGNAASAIEN 245 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + T S V+ A+LST +++ SY K+ L++ +YL Sbjct: 246 ASARQSDYKSFASTLASDLTSVDVAAVTAELSTYQSQLTASYSAIGKIFSLNLASYL 302 >gi|148254604|ref|YP_001239189.1| flagellar hook-associated protein FlgL [Bradyrhizobium sp. BTAi1] gi|146406777|gb|ABQ35283.1| putative flagellar hook-associated protein 3 (HAP3, flgL protein) (Hook-filament junction protein) [Bradyrhizobium sp. BTAi1] Length = 302 Score = 84.4 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 101/356 (28%), Gaps = 55/356 (15%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ++T + ++M + + +G ++Y GA ++ + Sbjct: 1 MTMRVATFANSDQMISSALRTQATMADMQVQEASGLKTEYLAGYGADTQHVVNLQVSVTR 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + +L ++ + + + IV + L G + I + Sbjct: 61 AQSYIDAATLADSKVQVMYSAVGQVSDIVSQLRSALSAASSGSSTGTTSAI--SSAQQLL 118 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 + N +GQYLF G +S ++ + Sbjct: 119 QQMAGILNTQYDGQYLFGGARTSTAAVDTSTFASGAGSLATPD----------------- 161 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D R+ + + Sbjct: 162 ------------------------------TSYYKGDDELASARVSGGAAVTYGVTADNS 191 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 ++M V + + L+ Q + + +A L + I Sbjct: 192 AFEEVMRVLKFVAN------SSTLSSTDISSALTLADQAVDDVATVQAKLSDAASRIESA 245 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + ++ + V+ AQLST ++ SY +K+Q L++ +YL Sbjct: 246 KSEQTDFKSYAESLATDLTSVDVAAVTAQLSTYQAQLTASYTAISKIQSLNLASYL 301 >gi|115522798|ref|YP_779709.1| flagellar hook-associated protein FlgL [Rhodopseudomonas palustris BisA53] gi|115516745|gb|ABJ04729.1| putative flagellar hook-associated protein 3 FlgL [Rhodopseudomonas palustris BisA53] Length = 303 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 39/352 (11%), Positives = 99/352 (28%), Gaps = 54/352 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + ++M + + +G S G++ I+ + + Sbjct: 5 VATFANSQQMIAAALRTQASMAEQQMQEASGVISTDFGGYGSKAQQIINLQVSVDRAQSY 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + + ++ + ++S+ ++ + L + ++ D + Sbjct: 65 IDTATQIGSKIEVMYSAVNSVADLLAEFRSLLTAASNSASTDST--SIQQSAADMLQQMA 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N G+YLF G + +P++ T Sbjct: 123 ALLNTQYGGKYLFGGARTDTRPVDVSTTA------------------------------- 151 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + + ++ D R+ DT+ + + Sbjct: 152 ---------------YPAMTSPSSASTSYYQGDDELAAARVSDTQSVSYGVTADNTAFEQ 196 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 M + + L+ + + + + I F Sbjct: 197 AMRAMNLVAN------ASTLSATALDEALNLAIDAVDATGIVLSRISNAAAAIERASAFQ 250 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +T S GV+ A L+T ++ SY K+Q L++ +YL Sbjct: 251 TEYKSFAETLGSDLTGVDVAAVTASLATYQAQLTASYSAIAKVQSLNLASYL 302 >gi|27378815|ref|NP_770344.1| flagellar hook-associated protein FlgL [Bradyrhizobium japonicum USDA 110] gi|27351964|dbj|BAC48969.1| blr3704 [Bradyrhizobium japonicum USDA 110] Length = 302 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 102/352 (28%), Gaps = 55/352 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M + + +GQ S G+ ++ + Sbjct: 5 VATFAQTNTMISDALRIQSVMANEQIQESSGQISSDFGGYGSTAQHVVNLQVSVTRAQSY 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + +L R+ + + SM +V + L G + I + E Sbjct: 65 VDAATLADSRVQVMYSAVGSMTDMVTQLRSQLSAASTGSSTEANSAIA--TAQQYLEQMG 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 + N +GQY+F+G + P+ Sbjct: 123 SLLNTQYDGQYVFAGGKTETAPV------------------------------------- 145 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 +T F + D ++ + R+ + + + + Sbjct: 146 ------DITSFATGTGSAATAD----TSYYSGDGEIASVRVSADQAVSYGVTADNSAFEE 195 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 +M V + + + L L + +A L + I Sbjct: 196 VMRVLKFVAN------STSLSSSDITQALDLASTALDDTVAVQARLSGAASQIETASTRQ 249 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +T S GV+ AQLST +++ SY K+ +++ +YL Sbjct: 250 SDYKSFAETLSSDLTGVDVAAITAQLSTYQSQLTASYSALGKILSMNLASYL 301 >gi|90422394|ref|YP_530764.1| flagellar hook-associated protein FlgL [Rhodopseudomonas palustris BisB18] gi|90104408|gb|ABD86445.1| putative flagellar hook-associated protein 3 FlgL [Rhodopseudomonas palustris BisB18] Length = 303 Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 101/352 (28%), Gaps = 54/352 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+T E+M + + +G +S G+ IL + Sbjct: 5 IATFGNSEQMIAAALRTQSTMANMQIQEASGITSSDFGGYGSSSQQILNLQVSVTRAQSY 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + +++ + ++ + +SS+ ++ L + + +D E Sbjct: 65 IDASTQASSKVEVMYSAMSSISDLITQFRSLLTGATS--STTTDATSVSQSAQDMLEQMA 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 + N G Y+F G + + P+ Sbjct: 123 SLLNTQYGGDYVFGGARTDQAPV------------------------------------- 145 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 D + + ++ D R+ +++ + + Sbjct: 146 ---------DIDSTVYAAMTSPSSADTSYYKGDDELASVRVSESQIVSYGVTADNAAFEK 196 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 M + S L+ N + L + + + ++ + + I F Sbjct: 197 AMRAMNLVAN--STTLSTDTLN----EALDLAETAVDAVGVVQSRVSNAASAIERASSFQ 250 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + V+ AQLST ++ SY K+Q L++ +YL Sbjct: 251 TEYQSYAQSLATDLTSVDVAAVTAQLSTYQAQLTASYAAIAKVQSLNLASYL 302 >gi|146341763|ref|YP_001206811.1| flagellar hook-associated protein FlgL [Bradyrhizobium sp. ORS278] gi|146194569|emb|CAL78594.1| putative flagellar hook-associated protein 3 (HAP3, flgL protein) (Hook-filament junction protein) [Bradyrhizobium sp. ORS278] Length = 302 Score = 82.1 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 97/352 (27%), Gaps = 55/352 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+T + ++M L + +G S+Y GA I+ + Sbjct: 5 IATFANSDQMITNALRTQATMATLQVQEASGLKSEYLADFGADTQHIVNLQVSVTRAQSY 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + +L ++ + + + IV + L G + I + E Sbjct: 65 IDAATLADSKVQVMYSAVGQVSDIVSQLRTALSAASSGTSTGTTSAI--SSAQQLLEQMA 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N +GQY+F G + ++ S Sbjct: 123 GILNTQYDGQYVFGGAWTLTAAVDTSSFATGTGSLSTVD--------------------- 161 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++ R+ D + + + Sbjct: 162 --------------------------TSYYQGDSELASVRVSDGQSVTYGVTADNSAFEK 195 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 +M V + L Q + + ++ L S I + Sbjct: 196 VMRVLKFVAN------SSSLSASDLSSALDLADQAVDDVATVQSNLSDSASRIESAKSQQ 249 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + ++ + V+ AQLST ++ SY +K+Q L++ +YL Sbjct: 250 TDFKSYAESLATDLTSVDVAAVTAQLSTYQAQLTASYSAISKIQSLNLASYL 301 >gi|254519435|ref|ZP_05131491.1| flagellar hook-associated protein 3 [Clostridium sp. 7_2_43FAA] gi|226913184|gb|EEH98385.1| flagellar hook-associated protein 3 [Clostridium sp. 7_2_43FAA] Length = 331 Score = 81.7 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 40/361 (11%), Positives = 122/361 (33%), Gaps = 42/361 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + KL++++ +G+ +V ++ ++ + Sbjct: 3 ITNQMMSKSFLRDLGRNQGYMKKLNDQLTSGKEIRRPSDNPFKVARSMQLHRDIGANTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + T L T+ L + Q +V +++ + + Sbjct: 63 NENIKDTTNWLDTTDTALEQLGNSFQRFRELMVSAGNAAYGSDEKKAIKDEMNEKVNEIA 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N + +G+Y+F G + KP+ + + N+ L+G EV Sbjct: 123 QILNSSFDGKYIFGGTKGNTKPIG---------------TNKDIVTGNNSIHLSGNDGEV 167 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV------- 238 + + + ++ + + + +D + Sbjct: 168 LEL--DNLDESVQNQIGMI--------------NKKLTVEVSQGVTMDYNVCATDLLLFK 211 Query: 239 --NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEK 296 N + + + I S++ + + +T + L T+ + ++ +++ RA +G + Sbjct: 212 DKNGSDVNVMGLLKEITDNIGSEDASVSGK--VTNENLKTMDETIANLLKIRAEVGAKQN 269 Query: 297 NINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 + + +N + +S++ ++ + + + + S ++ K+ + S+L++ Sbjct: 270 RMESAGDQNEEQNFNLKDILSQTEDIDFAEKNIEATVAQSVYMASLQVSAKIIQPSLLDF 329 Query: 357 L 357 L Sbjct: 330 L 330 >gi|260762634|ref|ZP_05874966.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 2 str. 86/8/59] gi|260673055|gb|EEX59876.1| flagellar hook-associated protein FlgL [Brucella abortus bv. 2 str. 86/8/59] Length = 85 Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 42/84 (50%) Query: 274 LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLST 333 + Q ++ ++ LG+++ + + I++ + V+ + A +++ Sbjct: 1 MQITTQAVTETTSEQTTLGLAQSRTEAATTRIAAQQKILNQSVLNLEEVDPYDAATRVNA 60 Query: 334 LINKIEMSYMITTKLQKLSILNYL 357 L +IE SY +T +LQ +S+LNYL Sbjct: 61 LKTQIETSYSLTVQLQNMSLLNYL 84 >gi|295687867|ref|YP_003591560.1| flagellar hook-associated protein FlgL [Caulobacter segnis ATCC 21756] gi|295429770|gb|ADG08942.1| flagellar hook-associated protein FlgL [Caulobacter segnis ATCC 21756] Length = 299 Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 95/356 (26%), Gaps = 58/356 (16%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T I T + + + + TG S LG V S+L + Sbjct: 1 MITRIGTFAHSNALIAASLRTQAKLADQQTQESTGLKSTSFGGLGTDVASLLRMSSQSTR 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + + + ++ A + + + + L + G + + A R Sbjct: 61 LTADNGAAQTASAYVQSAYAAVGDIADLANTIKSQLAAQISGTSLDG--DSLAAYARGWL 118 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 + T N G YLF G P++ QG + + + G Sbjct: 119 DDLQTQLNSQVGGVYLFGGEAVDAAPVDFSSADYDPTAVGNTGYYQGASTTRTFASVDGS 178 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 I +S Sbjct: 179 K-------------------------------------------------ISLSITAQAG 189 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 G + + + T A V + +SG+ + LG+ ++ Sbjct: 190 GFEQLARALSMVIADPGDSDTLSA-------AFDLVGEAVSGVGAVQEGLGVQASQLSSL 242 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + K + +D S+ G + A ++ ++E Y L S+L YL Sbjct: 243 ISRNETKIDTLDDLASQLKGADLAQAAVLVTNYQTQLEALYSTIGTLSSSSLLKYL 298 >gi|209967002|ref|YP_002299917.1| flagellar hook-associated protein 3 FlgL, putative [Rhodospirillum centenum SW] gi|209960468|gb|ACJ01105.1| flagellar hook-associated protein 3 FlgL, putative [Rhodospirillum centenum SW] Length = 492 Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 65/200 (32%), Gaps = 6/200 (3%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 + I+T + + R+ T + + L ++ TG +D LG + + + I Sbjct: 2 SSIATLTQYTRILRDTGLVKQQETDLQRQLSTGYKTDVYSGLGIDAARSVNLRETASRIT 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + LV R + + +V ++ L L T + + R + + Sbjct: 62 SYQRNIDLVQARTEVLDTAMQRVGSLVTSVISDLNKL--DGTTISDPTVVRDNARQALDQ 119 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + N EG+Y+F+ + + P+N ++D+ +L + + Sbjct: 120 IYSLLNTQVEGRYVFAASDETTPPVNDLT----GLIDTYDRFYTAYLNAPAGAATRLDFD 175 Query: 184 EVSSMNAQQMTDFIKQLEDK 203 + Sbjct: 176 GDGTTIGDADDALATGPTPA 195 Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 52/142 (36%), Gaps = 4/142 (2%) Query: 219 DHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF---LSKNLTDGARNVLTKKMLS 275 + + R+ D + + R+I+ + + + L Sbjct: 351 NAPMVARVDDNLDVTYGVRADASYFRNIIQGLAMVANLERPDDPEIRSRYYDALHS-ARD 409 Query: 276 TVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLI 335 +Q G + A +G +N+++ V + I++T + + + T +L+ Sbjct: 410 MLQTGSKDLNTAVASVGAVRRNLDQLEVKHKAVLGIVNTNVGEIEEADIATVATRLNLAE 469 Query: 336 NKIEMSYMITTKLQKLSILNYL 357 +++ Y L K SIL+YL Sbjct: 470 TQLQAGYRTIASLNKTSILDYL 491 >gi|292492370|ref|YP_003527809.1| flagellar hook-associated protein 3 [Nitrosococcus halophilus Nc4] gi|291580965|gb|ADE15422.1| flagellar hook-associated protein 3 [Nitrosococcus halophilus Nc4] Length = 400 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 58/401 (14%), Positives = 125/401 (31%), Gaps = 52/401 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ISTS +R + K+ +++ TG+ A +L+ + +++ Sbjct: 3 ISTSLFQQRSIDGILDQQAQVSKIQQQLATGRRILTPADDPAAAARLLDVRETFEQLSQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + T RLS + L+ + ++Q + V G +N + A +R + + Sbjct: 63 QRNADRATARLSQEETALAGVGDLLQRVRELAVQANNGAQNNENRVMMAKEVRQRLDEIL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL-------------------------NGYFTKDSLAK 159 AN D G+YLF+G +P+ S Sbjct: 123 GLANAQDASGEYLFAGFKGRTQPIIREGGNFTYQGDQGQRQIQISPSVQVADSDPGSEVF 182 Query: 160 KSFDQMLQGFLEENSKSLLAGQHLEVSSMNA-----------QQMTDFIKQLEDKFSDDE 208 + + F+ E S + S++ Q + Sbjct: 183 LAIREGNGTFVTEADPSNSGSGVIGPGSVSGTFVPGDYTLRFSQPQSSDSLTFEVLDSQN 242 Query: 209 YWANNWSNASDHNIKY---------RIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSK 259 + + S I + D + + ++ + + +S Sbjct: 243 NVVTSGNFVSGGAITFGGAQVRVTGTPGDGDRFTIRSSAHQDMFTTVQRFIDALERPVSD 302 Query: 260 NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE---RVFLQNKNNIIDTYI 316 + N + L+ + Q L + E RA +G I+ E + + + + + Sbjct: 303 TASQARFNNDMNRTLTDLDQALGKVSEIRAGVGARLNAIDSERQMNEDVSLQMAKLQSSL 362 Query: 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + A L+ + +E + +LQ LS+ + L Sbjct: 363 NDL---DLAEAIGHLNQQLTALEAAQRTYVRLQGLSLFSLL 400 >gi|86747895|ref|YP_484391.1| flagellar hook-associated protein FlgL [Rhodopseudomonas palustris HaA2] gi|86570923|gb|ABD05480.1| putative flagellar hook-associated protein 3 FlgL [Rhodopseudomonas palustris HaA2] Length = 303 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 105/356 (29%), Gaps = 54/356 (15%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ++T + ++M + +G S LG+ +L + Sbjct: 1 MLTRVATFANTDQMVAAALRTQSTMANQQIQEASGLVSSDFGGLGSSSQQVLNLQVSVTR 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + +L ++ + ++S+ ++ + L + + + Sbjct: 61 SQSYIDAATLANGKVEVMYSAVNSIADLITEFRTLLTSASNVASTDAA--SVTQSAQSML 118 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 E + N YLF+G ++ P+ + A S + + N Sbjct: 119 EQMASLLNTQYNSGYLFAGSDTKTAPV-DVSSSVYAAATSPSSADTSYYQGN-------- 169 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 D R+ D++ + + Sbjct: 170 -------------------------------------DDLASVRVSDSQTVSYGVTADSA 192 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 +M + + L+ N + L + I + L + +I + Sbjct: 193 AFEQVMRAMNLVAN--NSPLSTETLN----EALDLAVGAIDSIGVIQTKLSNAASSIAKA 246 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +T S GV+ A+LST ++ SY K+Q L++ +YL Sbjct: 247 SSYQSEYQSYAETLGSDLTGVDVAAVTAKLSTYEAQLTASYSAIAKVQGLNLASYL 302 >gi|168187527|ref|ZP_02622162.1| flagellar hook-associated protein 3 [Clostridium botulinum C str. Eklund] gi|169294602|gb|EDS76735.1| flagellar hook-associated protein 3 [Clostridium botulinum C str. Eklund] Length = 327 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 122/353 (34%), Gaps = 30/353 (8%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ + + ++ K+ ++ +G+ V ++ + N + Sbjct: 3 VTNKMLSNNFLADMRTNLENINKIQQQNTSGKKFRKPSDDPFAVARSMQLHTDINTNKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + V+ L T+ L ++Q + L+ G ++ + + Sbjct: 63 SKNITDVSNWLDTTDTALGQAGNVLQRVRELLISSGNGGYTKSERRAIKDEINEKIGEMS 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N G Y+FSG S+ KP+ K + K Sbjct: 123 QILNTNFGGNYIFSGSRSTTKPMEVEVDKTTGNTKLI----------------------- 159 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDV-SANVNMRGIR 244 N ++ + K ++ + + + Y + T+ ++ + + + +R Sbjct: 160 --YNKKEGGELDKTVDKDEYNQIASKLKIEVSQGVTMDYNVTATDVLEFKNETGDDKNLR 217 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 +I ++ I T S++ N L + L+ + +S +++ RA +G + I Sbjct: 218 EI--LSNIVTHLDSED--PDEINKLIGEDLTNITDSISNVLKIRAEVGAKQNRIEGADDR 273 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + +SK V +T++ S + K+ + S+++YL Sbjct: 274 NKDGTFNMTKILSKHEDVNYTENMTDYATMLTVYMASLQTSAKIIQPSLMDYL 326 >gi|23099961|ref|NP_693427.1| flagellar hook-associated protein FlgL [Oceanobacillus iheyensis HTE831] gi|22778192|dbj|BAC14462.1| flagellar-hook associated protein 3 [Oceanobacillus iheyensis HTE831] Length = 293 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 105/352 (29%), Gaps = 62/352 (17%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ S + M N K E++ TG+ + + E + + Sbjct: 3 VTQSMLSNNMLRNLTNSNAQMNKYMEQLYTGKKITKPSDDPVVAMKGIGYRSELVRVEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S V + S + L +Q + V G ++ + Sbjct: 63 QRNTSEVNNWMDNSDSALDQATSAMQRLRELAVKANNGTNSEDELQSILQEANELKGHLT 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN G+Y+F+G N+ P+ + + F + + ++ Sbjct: 123 DIANTNVNGKYIFNGTNTDTPPVTVDEDGNITTE---------FQDSDVVIEVSAGTKIK 173 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++++ + D F+ + + +N ++ E +D S Sbjct: 174 ANVDGGEA---FGGDPDLFTAVDNFIDN------------LESGENLDES---------- 208 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 + + G++ II RA LG + L Sbjct: 209 ----------------------------IGELDTGINQIINSRAELGARMNRLELIENRL 240 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +S + + +L T + + +++ + S+L++L Sbjct: 241 SEQEIVATQTMSDNEDADYAETITKLITQESLHRAALSAGSRIIQPSLLDFL 292 >gi|220934401|ref|YP_002513300.1| flagellar hook-associated protein 3 [Thioalkalivibrio sp. HL-EbGR7] gi|219995711|gb|ACL72313.1| flagellar hook-associated protein 3 [Thioalkalivibrio sp. HL-EbGR7] Length = 400 Score = 79.4 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 60/399 (15%), Positives = 136/399 (34%), Gaps = 48/399 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ IF ++ + + ++ TG+ + L++ + Sbjct: 3 VSTTQIFRNGIGAIQDNQQGLARTQLQLGTGKRILSPSDDPSGAVQALQFRSSVEKTEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++V +RL S+ L+S+ + +Q + V G N AG +R + V Sbjct: 63 QRNGNIVEQRLRLSETILTSVGEGLQRVRELAVQGNNGSQTNETRRYIAGEIRQILDELV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN-------GYFTKDS------------LAKKSFDQM 165 +N D G+Y+++G+ S +P + Y D S + Sbjct: 123 QLSNTRDANGEYIYAGLTSLTQPFSPGAGGEVFYNGDDGQRRLQISPVRQLAIGDSGQAV 182 Query: 166 LQGFLEENSKSLL--AGQHLEVSSMNAQQMTDF---IKQLEDKFSDDEYWANNWSNASDH 220 N ++ + ++A + DF + + S Sbjct: 183 FMDIPTGNGTFVVRDDPGNTGGGVIDAGSVIDFNAWQADTYTISFSEVG-GELFYEVSGG 241 Query: 221 ------------------NIKYRI----KDTEGIDVSANVNMRGIRDIMFVAVIGTEFLS 258 I+ RI D + +S + N +A ++ Sbjct: 242 GLPPVSTPFVEGEAIRFAGIETRIQGTPADGDSFTLSPSENQDLFATYRQLAEALEAPVT 301 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 + N + L + Q L I++ RA +G K + +R ++ + T +S+ Sbjct: 302 DTPSRARLNNAVNRALVNLDQALGNILDTRASVGSRLKTVENQRNINEDVLLQLRTTLSE 361 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A ++ + ++ + ++Q+LS+ N++ Sbjct: 362 IEDLDYAEAISRFNLQQTALQAAQQSYVQVQRLSLFNFI 400 >gi|58039488|ref|YP_191452.1| flagellar hook-associated protein FlgL [Gluconobacter oxydans 621H] gi|58001902|gb|AAW60796.1| Flagellar hook-associated protein 3 FlgL [Gluconobacter oxydans 621H] Length = 353 Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 128/348 (36%), Gaps = 6/348 (1%) Query: 10 SIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSN 69 I ++ + + L++ L E TG S LGA T L + ++ + Sbjct: 12 GISSQLLLGVQNLSQSQSSLQLEASTGVLSSSYAGLGASRTQALALQPAITQVSAWTSNV 71 Query: 70 SLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFAN 129 + L+T+Q LS + I QD+ L L T + A + + S N Sbjct: 72 TNAQNTLTTTQTALSQISTIAQDLTSSLSTLGSTLT-YSTVTTAATAAQSALTSLGNLLN 130 Query: 130 MTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN 189 Y+F+G ++ P++ S +Q + ++ +L+ S+ Sbjct: 131 TKQGDSYVFAGQQNTTAPVST-DLGTSDLATQIEQAVSQLGSTSADDVLSTTEDLASNTA 189 Query: 190 AQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFV 249 A Q D+ + + + ++ IRD+M Sbjct: 190 AGQPFSAAVSTSP----DQAYQQKMQVVVGQSETVSVGMVATQSATSTSTTSPIRDLMRN 245 Query: 250 AVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKN 309 ++ S + + + L + S+++ SG+ + +LG+ + ++ + L + Sbjct: 246 LMVVASLGSSSTSASDYSSLISGLQSSMETVTSGLGDMSGLLGVQQNSLTTQASMLSQMS 305 Query: 310 NIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + T + + Q++ N+++ SY + ++ +++ +YL Sbjct: 306 SALTTQLGQVKDAYLAQVSTQVTDTNNQLQASYSLIADMKGMTLASYL 353 >gi|220927555|ref|YP_002504464.1| flagellar hook-associated protein FlgL [Clostridium cellulolyticum H10] gi|219997883|gb|ACL74484.1| flagellar hook-associated protein 3 [Clostridium cellulolyticum H10] Length = 309 Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 108/352 (30%), Gaps = 46/352 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + M K ++ TG+ L+ + + I + Sbjct: 3 ITNNMLISNMLTALGNNESRLSKYQNQLHTGKKIQLPSDDPIVAARALKLRTDVSKIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + A L+ + I++ G + ++ V Sbjct: 63 QKNLGDAQSWVDATDAALAQIGDILKRAKELATQAANGTNSITETSDIGQEMKQLKVQLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN T G+Y+FSG + +K + + S F+ + E+ + AG ++ + Sbjct: 123 HIANTTYSGRYMFSGFKTDQKLIED--DETSANFGKFEIDVNTVTEKIQFEIGAGDNINI 180 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + D F+ + N + Sbjct: 181 NVAGG-----------DIFNSGGN-------------------------AVNGGEPAM-- 202 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 I + + S + N LS Q + ++ RA +G + I+ + Sbjct: 203 IALFTNVIADLDSGD------NAGVSSQLSQFDQQIDNLLRVRADIGARQNRIDLSADRM 256 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 N + + +SK+ V+ L N + S ++ + +++++L Sbjct: 257 SNDLVNMTSLMSKNEDVDPAETIMNLKNEENVYQASLAGGARIIQQTLVDFL 308 >gi|254516996|ref|ZP_05129054.1| flagellar hook-associated protein 3 [gamma proteobacterium NOR5-3] gi|219674501|gb|EED30869.1| flagellar hook-associated protein 3 [gamma proteobacterium NOR5-3] Length = 402 Score = 77.1 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 55/400 (13%), Positives = 130/400 (32%), Gaps = 50/400 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST I++ E D + E+ TG+ + IL+ E++ + + Sbjct: 5 LSTLQIYQSGISTILEKQADLARTQLELATGKRIQSPSDDPSGAVKILDLEEDIRLVDQY 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + SL +L+ ++ L+ + ++Q + V A ++ E V Sbjct: 65 QRNASLAQGQLAVEESTLTGVNNVLQRVRELTVQANNATQSPETRASIAVEVKARLEELV 124 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNG--------------YFTKDSLAKKSFDQMLQGFL 170 AN D +YLF+G + +P + + A+ + Sbjct: 125 ALANTRDGNDEYLFAGFQAQTQPFTQQGGTVVYSGDDGQRFLDIAASAQVAVRDSGSRVF 184 Query: 171 EENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNAS-DHNIKYRIKDT 229 + ++ + + + D + + +S + I Y + D+ Sbjct: 185 LAVDAGNGSFDFSAAATNSGTAVVS--ESSADNSFVRDDYTVTFSQLTPADPITYSVTDS 242 Query: 230 EGIDVSANVNMRGIRDIMFVAVIGTE-----FLSKNLTDGARNVLTKK------------ 272 V+ G A + E S N+ + + + Sbjct: 243 GAAVVATGNYTPGEAISFNGARLVIEGTPEDGDSINIDSAPKQSIFETLQGIVDALENSS 302 Query: 273 ---------------MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 L+ + Q + ++E ++ +G+ I ++ + N + T +S Sbjct: 303 SSPSGGAAVNNALASGLNNLDQAIGNVLEVQSDVGVRLNRIESQQSINEEFNLQLQTTLS 362 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V+ A ++L+ + ++ + Q L++ NY+ Sbjct: 363 DVQDVDFAEAISKLNLQLVALQAAQQTYVTTQGLTLFNYI 402 >gi|88704299|ref|ZP_01102013.1| flagellar hook associated protein type 3 FlgL [Congregibacter litoralis KT71] gi|88701350|gb|EAQ98455.1| flagellar hook associated protein type 3 FlgL [Congregibacter litoralis KT71] Length = 402 Score = 77.1 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 129/398 (32%), Gaps = 46/398 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST IF+ + D + +E+ TG+ + IL+ E++ + + Sbjct: 5 LSTLQIFQSGISTILDKQADLARTQQELATGKRIQSPSDDPSGAVKILDLEEDIRLVDQY 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + SL +L+ + LS++ ++Q + V A + E V Sbjct: 65 QRNASLAEGQLAVEETTLSAVNNVLQRVRELTVQANNATQSPETRASIAVEVNARIEELV 124 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN D +YLF+G + +P + + + + L +G + Sbjct: 125 ALANTRDGNDEYLFAGFQAQTQPFSRQGGTVTYSGDDGQRFLDIAASAQVAVRDSGSRVF 184 Query: 185 VSSMNAQQMTDFIKQL------------EDKFSDDEYWANNWSNAS-DHNIKYRIKDTEG 231 ++ DF D + + +S A+ + Y + D+ Sbjct: 185 LAVDAGNGSFDFAADPANTGTAVVAESSADGSFVRDDYTVTFSQATPADPVTYSVTDSSA 244 Query: 232 IDVSANVNMRG--------------------------------IRDIMFVAVIGTEFLSK 259 V+ G + +A Sbjct: 245 AVVATGNYTPGDAISFNGARLVIEGTPEDGDSITLDSAPKQSIFDTLQGIADALENSAGT 304 Query: 260 NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKS 319 A N L+ + Q + ++E ++ +G+ I ++ ++ N + T +S Sbjct: 305 PSGSAAVNNALASGLNNLDQAIGNVLEVQSDVGVRLNRIESQQSINEDFNLQLQTTLSDV 364 Query: 320 IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V+ A ++L+ + ++ + Q L++ NYL Sbjct: 365 QDVDFAEAISKLNLQLVALQAAQQTYVTTQGLTLFNYL 402 >gi|167644971|ref|YP_001682634.1| flagellin [Caulobacter sp. K31] gi|167347401|gb|ABZ70136.1| flagellin, putative [Caulobacter sp. K31] Length = 307 Score = 76.3 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 106/354 (29%), Gaps = 49/354 (13%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T +STS F M E++ + ++++ + + + +A Sbjct: 2 TRVSTSGNFGVMTSNLMRAQVLQNIAGEQVSSQKNANDLKGYAKNAEVLTAMKTAQAKVA 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 L + V+ RL + + Q+ + + ++ Sbjct: 62 GFLDQTTRVSNRLDVQDIGIGQVSDATQNARD----AVANAIAAGSAETLMQQMNGAFGD 117 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 V N G+Y+F+G S +P T S+A + + + + Sbjct: 118 VVQGLNSKFNGRYVFAGAKSDTQP----TTATSMADLTAGPPIATLFKNDQYVTSNRIDD 173 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 S Q + F + + + N Sbjct: 174 TTSVDTGQLADKLGTGVYGVF-------------------------QQVQAYVDANGPFT 208 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + ++ K +L T +G++ +A G+++K + + Sbjct: 209 GKL----------------TQTQSDFLKSLLPTFDSVKTGLVTAQAQNGLNQKRFDTAKT 252 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L ++ + + T + V+ A +L + ++ S + LQ S+LN L Sbjct: 253 DLSDQADTLTTMVGGITDVDMAEAITRLESAKLAVQASAQVFASLQNSSLLNVL 306 >gi|114320064|ref|YP_741747.1| flagellar hook-associated protein 3 [Alkalilimnicola ehrlichii MLHE-1] gi|114226458|gb|ABI56257.1| flagellar hook-associated protein 3 [Alkalilimnicola ehrlichii MLHE-1] Length = 408 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 62/407 (15%), Positives = 121/407 (29%), Gaps = 56/407 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS + + K ++ +G+ A + ILE E+ N + Sbjct: 3 LSTSQLALQGVNSILSQQASLSKTQAQLASGRQILTPSDDPAGASRILELEKAINTVERY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + RL S+ L+ +Q + V G D A LR + + V Sbjct: 63 NRNADQAETRLGLSENILNEFGNTLQRVRELSVQAANGSQDRETRAYIASELRQAQDQLV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTK---------------DSLAKKSFDQMLQGF 169 AN D G++LF+G + +P + D Sbjct: 123 QLANTDDGNGEFLFAGSETRTQPFTKTAGGKVVYNGDQGQREVRIGPSRTLAVDSSGFDA 182 Query: 170 LEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDT 229 + Q E + + E + + + YR+ D Sbjct: 183 FMKIPNGNGDYQAREAQGNSGSGIITVGDSP-ALVQPGEAYTIAFEQDGAGGMTYRVLDG 241 Query: 230 EGIDVSANVN------------------------------MRGIRDIMFVAVIGTEF--- 256 + V+ + G R + A + F Sbjct: 242 DDQPVAVDGEPVTGPYEPGMTLRFPAESGQSLQVKLDGRPEEGDRFEVSAARPQSVFETV 301 Query: 257 ------LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 L + A N + L+ + QG+ II R+ LG ++ R + Sbjct: 302 NNLIRTLEDDGDGPALNNAVNRFLADIDQGMENIIRVRSELGARLNTLDASRDANEGALL 361 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ S+ ++ A + + + ++ + T+LQ LS+ ++ Sbjct: 362 DLNAAKSRLADLDYAEATGRFNQELVGLQAAQQTYTRLQGLSLFEFI 408 >gi|182418320|ref|ZP_02949615.1| flagellar hook-associated protein 3 [Clostridium butyricum 5521] gi|237666729|ref|ZP_04526714.1| flagellar hook-associated protein 3 [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377702|gb|EDT75246.1| flagellar hook-associated protein 3 [Clostridium butyricum 5521] gi|237657928|gb|EEP55483.1| flagellar hook-associated protein 3 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 347 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 127/354 (35%), Gaps = 11/354 (3%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ S + + + L ++ TG++ + ++ E + + Sbjct: 3 ITNSMLVSNYMNNMQRNLGNMSTLQNQLATGKTIQRASENPYIAVRTMQLNAEISANKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + L T+ L I+ + V G N+ + + + F Sbjct: 63 NSNITDASNWLDTTDTALGQANNIMARIKELSVKAGNGSYSENEIGAIKDEIVEKVKEFG 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N + +G ++F G S+ KP+ D+ D+ + K + + Sbjct: 123 QVLNTSFDGNFIFGGSKSTSKPVG---VDDNGNISFIDKNGNPIDMDKIKDVNDPNKIVY 179 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNW--SNASDHNIKYRIKDTEGIDVSANVNMRGI 243 +++ T+ + + +++ N+ S +D ++ + D A+ +G Sbjct: 180 DQISSSLKTEISQGVTVEYNKTAVEILNYKDSKGNDTSVINTMSDLVKCLGVASGETKG- 238 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + + N +D A ++ KM + S + + R+ +G + + + Sbjct: 239 -----TITLSDGTTTINGSDDALKYISGKMTEDITAIASNVSQIRSNVGAMQNRMESAKT 293 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++++ + + +S + ++ + S L + ++K+ ++L+Y+ Sbjct: 294 TNEDQSYNMTSILSNTDDIDFAEKTMEYSILQTVYIATLQTSSKILNKTLLDYM 347 >gi|322807048|emb|CBZ04622.1| flagellar hook-associated protein FlgL [Clostridium botulinum H04402 065] Length = 385 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 47/383 (12%), Positives = 128/383 (33%), Gaps = 32/383 (8%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + ++ ++++++ +G++ A V ++ + + Sbjct: 3 ITNNMMANSFMSDMNNNLENLNRINQQLTSGKNFSKPSHDPAGVIRSMQLYTSIDANKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S V L + L + K + + L + + S Sbjct: 63 NKNISNVINWLDVTDTALDQIGKQLGKIRDKLEEAGNPGFGETERKALKDEVNGIIASMS 122 Query: 126 TFANMTDEGQYLFSGINSSEKP-----------------------LNGYFTKDSLAKKSF 162 N T +G+Y+FSG + KP L+ S A+K Sbjct: 123 QTLNTTFDGKYIFSGTRVTSKPTGIEKNGKNNELVYLKNDQSVLLLDDTLKAISAAEKLS 182 Query: 163 DQMLQGFLEENSKSLLAGQHLEVSSMNAQQ------MTDFIKQLEDKFSDDEYWANNWSN 216 + + + + + + S++ ++ ++ SD++ N Sbjct: 183 GKSINEIKDSELLDFKSLVNKDPSTLTPEEKIKVDKLSSEEIDALKNLSDEDLKHLGEYN 242 Query: 217 ASDHNIKYRIKDTEGIDVSANVNM--RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKML 274 + +K I + ++ + +G D+ + + L + + L + L Sbjct: 243 QMNAKLKAEISEGVVMEYNVTATEVLQGGGDLRQLLENIVKHLESDDPNEINK-LYGEDL 301 Query: 275 STVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTL 334 + + L ++ RA +G + ++ + + N + +S V + + + L Sbjct: 302 GNIDKALDNVLRIRAEVGAKQNRMDAAKEMNKETNFNMTEILSNIEDVNLVEKNMEFAIL 361 Query: 335 INKIEMSYMITTKLQKLSILNYL 357 + S + K+ + ++++YL Sbjct: 362 QSVYISSLQTSAKVLQPTLMDYL 384 >gi|168183197|ref|ZP_02617861.1| flagellar hook-associated protein 3 [Clostridium botulinum Bf] gi|237796174|ref|YP_002863726.1| flagellar hook-associated protein 3 [Clostridium botulinum Ba4 str. 657] gi|182673643|gb|EDT85604.1| flagellar hook-associated protein 3 [Clostridium botulinum Bf] gi|229261031|gb|ACQ52064.1| flagellar hook-associated protein 3 [Clostridium botulinum Ba4 str. 657] Length = 320 Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 108/354 (30%), Gaps = 39/354 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + ++ +++++ +G++ A V ++ + + Sbjct: 3 ITNKMMANSFMTDMNNNLENLNRINQQSSSGKNFSKPSHDPAGVIRSMQLHTGIDANKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S V L + L + K + + L + + S Sbjct: 63 NKNISNVINWLDVTDTALDQIGKQLGKIRDKLEEAGNAGYGETERKALKDEVNGIIASMS 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N +G+Y+FSG + KP G + S D ++ ++ L E Sbjct: 123 QTLNTNFDGKYVFSGTRVTGKP-TGIQKDGTTKNNSID-----YINKDGSMPLDPAGDEY 176 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM--RGI 243 MN +K I + ++ + +G Sbjct: 177 KQMNG------------------------------KLKAEISEGVVMEYNVTATEVLQGD 206 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 D+ + L + L + L + + L ++ RA +G + + + Sbjct: 207 VDLRKLLENIVNHLDSDDPKEINK-LYGEDLGNIDKALDNVLRIRAEVGAKQNRMEAAKE 265 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + N + +S V H + + L S + K+ + ++++YL Sbjct: 266 MNKETNFNMTEILSNIEDVNYAEKHMEFAVLQAVYISSLQTSAKILQPTLMDYL 319 >gi|188586844|ref|YP_001918389.1| flagellar hook-associated protein 3 [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351531|gb|ACB85801.1| flagellar hook-associated protein 3 [Natranaerobius thermophilus JW/NM-WN-LF] Length = 328 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 124/352 (35%), Gaps = 27/352 (7%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ + + M +D ++ TG+ A L+ E+ +A+ Sbjct: 3 VTNKMMSDNMLRNLNTNLRDMNHTQNKLSTGKRILSPSDDPAGTARTLDLRTEETELAKY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+++ + L + ++Q + + D A + + E V Sbjct: 63 KQNVDDADSWLTSTDSALDEVDDVLQRVRELTIYAASDSVDQQSREALAAEVMELKEHLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN G+++F G N+++KP + D + F E S + Sbjct: 123 EVANTDFGGKHIFGGHNTTDKP---FDMDDVEEMNGEEGEYNTFDVEYSGNRGRLNTDIS 179 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 S + + +E + + + + ++ E D + + NM + D Sbjct: 180 SDVT----------ISKNLHGEEVFGSF-------DEEENGENGENGDEAISQNMFKMLD 222 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 ++ +++ + L+ + L + + ++ RA +G + + + L Sbjct: 223 GVYDSMMEDDGGGT-------EKLSNEHLQDLDHWIENNLDNRAEVGARQNRLELSKNRL 275 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 Q+ ++ +S++ + L + N M+ ++ + ++L++L Sbjct: 276 QDIEHLTKEDLSETEEADMAKTIMDLKSQENVHRMALSAGARIIQPTLLDFL 327 >gi|56964842|ref|YP_176573.1| flagellar hook-associated protein 3 FlgL [Bacillus clausii KSM-K16] gi|56911085|dbj|BAD65612.1| flagellar hook-associated protein 3 FlgL [Bacillus clausii KSM-K16] Length = 353 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 44/369 (11%), Positives = 110/369 (29%), Gaps = 47/369 (12%) Query: 11 IFERMNILTKELNK-----DSVKLHEEMVTGQSS-DYGLQLGARVTSILEWEQEKNHIAE 64 + + + D + +++ + S D + ++ Q + + Sbjct: 9 MTNSLRYSQSSYQRLSTLYDQISAQKKIT--RFSQDPVVA-----AKSMQHRQSLAQMEQ 61 Query: 65 RLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + + L+ L + I++ + + + A L + Sbjct: 62 YKRNVNEAQSWLNQGDTSLKEVSSILKRVRELAITGSTDGYGEEERKNIAHELEELRNHL 121 Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLE------ENSKSLL 178 +T AN G+Y+F+G ++ P+ + L + D + + ++ + Sbjct: 122 ITVANSNVNGKYIFNGSDTDNTPVQE-LSPSKLNGEKLDNVKITYGGQIYDYDADAGHFV 180 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVS--- 235 A + +N + + + A + RI + DVS Sbjct: 181 ARGGEDTLVLNGENIETGTGDVV---------------AEKDMLIMRISTNQK-DVSFEL 224 Query: 236 -----ANVNMRGIRDIM--FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQR 288 VN R + + F L + +S + L + Sbjct: 225 QKGVEIQVNTDA-RKLFSDELYSDFFMFEQALLDPETSAEDLGEFISKIDAHLRNAADVH 283 Query: 289 AVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKL 348 LG ++ L + + S + ++ A +L + +T ++ Sbjct: 284 GQLGARMNRVDLMEDRLGQQEYFVKETKSMNEDLDVSEAIMKLLVAEGVHNAALAVTARI 343 Query: 349 QKLSILNYL 357 + S+L++L Sbjct: 344 IQPSLLDFL 352 >gi|121997312|ref|YP_001002099.1| flagellar hook-associated protein 3 [Halorhodospira halophila SL1] gi|121588717|gb|ABM61297.1| flagellar hook-associated protein 3 [Halorhodospira halophila SL1] Length = 420 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 1/145 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS + + ++ +G+ L+ ++ + Sbjct: 3 VSTSHMQNTAVQNMTGQQSEINDTQTQLSSGRRVLRPSDDPTSAARTLDLKRATESLERF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L RLS S++ L +Q + V G D + A + + Y+ V Sbjct: 63 NRNGDLARTRLSMSESALEQAGNELQRIRELTVQAANGTQDASTRSYIASEIEERYKQLV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN 149 N D G+YLFSG + +P N Sbjct: 123 ELGNSRDGNGEYLFSGSRTRTQPFN 147 Score = 43.5 bits (101), Expect = 0.047, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 33/88 (37%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + L + + R+ +G ++ E+ + + S ++ A Sbjct: 333 ADRALGDLDLAMENTYRVRSEIGARLSTLDSEKASNEAAIIDLKQATSDERDLDYAEATG 392 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + +E + ++Q LS+ +Y+ Sbjct: 393 RFNQELTGLEAAQSTFGRVQNLSLFDYI 420 >gi|319787114|ref|YP_004146589.1| flagellar hook-associated protein 3 [Pseudoxanthomonas suwonensis 11-1] gi|317465626|gb|ADV27358.1| flagellar hook-associated protein 3 [Pseudoxanthomonas suwonensis 11-1] Length = 400 Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 58/395 (14%), Positives = 126/395 (31%), Gaps = 43/395 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ISTS ++++ K L +++ TG+ + + + ++ + Sbjct: 5 ISTSMMYDQSLATMLSRQKQLASLQQQIATGRKTVTAKDDPVGAGAAVGLDRSLAELERF 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + RL + L+ + + V ++ A LR E V Sbjct: 65 GLNANNINNRLGMQENVLALAGDDMIRINELAVQANSDTLSDDDRRSIAAELRSLREHLV 124 Query: 126 TFANMTDE-GQYLFSGINSSEKPL----NGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + AN +D G+YLF+G P G ++ + F+++ Sbjct: 125 SLANSSDGTGRYLFAGAADDVAPFGRVAGGIAYNGDQTQRMVEIAPGTFVKDTLPGSEVF 184 Query: 181 QHLEVSSMNAQQMTDFIKQ---LEDKFSDDEY--W------------------------- 210 + D + + FS W Sbjct: 185 MRVRTGDGTVDARMDPANTGSMILEGFSRSPAGGWEGAGYRVEFTGDNTYSVTDHAGNPI 244 Query: 211 -ANNWSNASD---HNIKYRIKDTEGIDVSANVNMRGIRD-IMFVAVIGTEFLSKNL---T 262 + W+ D ++ RI T + + G RD V + + S + Sbjct: 245 ASGTWTAKQDIEFAGLRVRISGTPAEGDALEIGPAGTRDIFATVEALASALESPTVTIAD 304 Query: 263 DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGV 322 + AR + + V + +I+ RA+ G I++ + + + T +S + Sbjct: 305 NAARRNALQAGMRDVARAAEQLIDARALGGAQLALIDDAGALREANSVTLKTTLSAMRDL 364 Query: 323 EQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + A + ++ + + T++ LS+ N L Sbjct: 365 DYADAITRFQLESTALQTAQTVFTRMHGLSLFNLL 399 >gi|302382562|ref|YP_003818385.1| flagellin domain protein [Brevundimonas subvibrioides ATCC 15264] gi|302193190|gb|ADL00762.1| flagellin domain protein [Brevundimonas subvibrioides ATCC 15264] Length = 309 Score = 74.4 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 109/354 (30%), Gaps = 47/354 (13%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 + +ST+ F+ + + + T +++ G ++ + + + Sbjct: 2 SRVSTTGNFQSALLNLMASQQQQADAANRVSTQKNATDLTGFGRSSETLTALKAASSRVQ 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + + +V RL L+ M + + G ++ L + S Sbjct: 62 GFIDTGEVVGARLEAQDLALNQMIDGIGGARE----AIGGVLASDSAGTLMLELEGQFAS 117 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 N +G YLF G N++++P++ D A + G ++ ++ Sbjct: 118 VTGGLNARHQGGYLFGGANTTQQPVSVATLSDLAAAPTV----AGTFNNDTIKPVSRVAE 173 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 S +D + F D + + +N Sbjct: 174 NTSIETGYLASDLGSTIFQIFKDIKAYNDN------------------------------ 203 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 A+ LS + + ++ + G +K + + + Sbjct: 204 ---------PATGPLTGKPTDAQKAFLTAQLSRLDAAKTATVDTASRNGSLQKRVEQIGL 254 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +D +SK + A L ++ S + ++L+ +S+LNYL Sbjct: 255 SHTGQLTSLDEMVSKRTDADLAKAVTDLQLSQIAVQASAQVVSQLRDVSLLNYL 308 >gi|170742314|ref|YP_001770969.1| hypothetical protein M446_4186 [Methylobacterium sp. 4-46] gi|168196588|gb|ACA18535.1| conserved hypothetical protein [Methylobacterium sp. 4-46] Length = 602 Score = 74.4 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 63/214 (29%), Gaps = 9/214 (4%) Query: 153 TKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN 212 S + L + S + D +D Sbjct: 389 ALGSALDTAATTDLAASSAVRASSDFFAASASPGLAPRRVALDAAGNAAGYLADPSGRTV 448 Query: 213 NWSNASDHNIKYR------IKDTEGIDVSANVNMRGIRDIMFVAVIGTEF-LSKNLTDGA 265 W D + R I D E + + N +RD M + + +D A Sbjct: 449 IWYRGDDTSADPRETAQVRISDNETVGIGVQANEAPLRDAMAGLAVAASLSFQEASSDDA 508 Query: 266 RNVLTKKMLSTVQQGLSG--IIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE 323 R L ++ G I + L ++ I ++ ++ ++ + Sbjct: 509 RYAAFSDRLKSLLSPDHGPTIKDISTDLTLASGRITAQKTQNGQTRLVLQNALAGVENAD 568 Query: 324 QHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +L L +++ SY T L KLS+ NYL Sbjct: 569 TQEVATKLLALQTQLQASYQTTATLAKLSLTNYL 602 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 25/177 (14%), Positives = 51/177 (28%), Gaps = 3/177 (1%) Query: 13 ERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLV 72 ++ + D L ++ TG+ + LG ++ L + + + + L Sbjct: 16 NARRLIGLKSQLD--GLSTQLSTGKVAQTYGALGTARSTSLSAHAQVSALDASDAAIDLA 73 Query: 73 TKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD 132 RL + A + K+ D +T + V N Sbjct: 74 KTRLDLAGASVQQAGKLASDTWSQF-ANPGTQTGGVARANLKAIAAGRLGGLVDALNQQT 132 Query: 133 EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN 189 QYLF G + P+ + + L + E + L ++ Sbjct: 133 GNQYLFGGRTTGTAPVATADAILNGDAAAHRDGLGAVIAERRSADLGTGTPRTGRLS 189 >gi|83814195|ref|YP_446734.1| flagellar hook-associated protein 3 [Salinibacter ruber DSM 13855] gi|83755589|gb|ABC43702.1| flagellar hook-associated protein 3 [Salinibacter ruber DSM 13855] Length = 319 Score = 74.0 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 109/337 (32%), Gaps = 40/337 (11%) Query: 21 ELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQ 80 L +D +L E++ +G+ + + + + N +A R S + + +Q Sbjct: 23 RLQRDISRLREQISSGKRINRPSDDPSSFATAERMKTLGNQLARREESIASARTFVDRTQ 82 Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSG 140 L + + V + + A LR V N T G+Y+F+G Sbjct: 83 QELDGLADLFTKAREDGVRAADDTRSADDRAAIAEELRSIKGEVVDRMNSTQGGEYIFAG 142 Query: 141 INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQL 200 + +P + S + L+ + + +++ + + + Sbjct: 143 NRTDTQP---FGADGSANDAAPINGSLDALDGDRTRPIGKNKDLTINVDGKALAQYDTDG 199 Query: 201 EDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKN 260 D E I + + + + + Sbjct: 200 GDP--------------------------ETITGALD-----------NLIKAVDPADNS 222 Query: 261 LTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 G + L V+ L +I + + G + ++ + ++ + + S + Sbjct: 223 PPSGPPDPDISTALGEVEDALDHVISKGSEAGAIGRRLSTAQEQVEAASLEANERRSDAE 282 Query: 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + TA ++L +++ ++ T+ Q+ S++N+L Sbjct: 283 DTDLATAISELQQRQTQLQAAFQATSSSQQTSLVNFL 319 >gi|148380697|ref|YP_001255238.1| flagellar hook-associated protein 3 [Clostridium botulinum A str. ATCC 3502] gi|153933227|ref|YP_001384981.1| flagellar hook-associated protein 3 [Clostridium botulinum A str. ATCC 19397] gi|153936218|ref|YP_001388451.1| flagellar hook-associated protein 3 [Clostridium botulinum A str. Hall] gi|226950151|ref|YP_002805242.1| flagellar hook-associated protein 3 [Clostridium botulinum A2 str. Kyoto] gi|148290181|emb|CAL84300.1| flagellar hook-associated protein 3 [Clostridium botulinum A str. ATCC 3502] gi|152929271|gb|ABS34771.1| flagellar hook-associated protein 3 [Clostridium botulinum A str. ATCC 19397] gi|152932132|gb|ABS37631.1| flagellar hook-associated protein 3 [Clostridium botulinum A str. Hall] gi|226840871|gb|ACO83537.1| flagellar hook-associated protein 3 [Clostridium botulinum A2 str. Kyoto] Length = 320 Score = 74.0 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 108/354 (30%), Gaps = 39/354 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + ++ +++++ +G++ A V ++ + + Sbjct: 3 ITNKMMANSFMTDMNNNLENLNRINQQSSSGKNFSKPSHDPAGVIRSMQLHTGIDANKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S V L + L + K + + L + + S Sbjct: 63 NKNISNVINWLDVTDTALDQIGKQLGKIRDKLEEAGNAGYGETERKALKDEVNGIIASMS 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N +G+Y+FSG + KP G + S D ++ ++ L E Sbjct: 123 QTLNTNFDGKYVFSGTRVTGKP-TGIQKDGTTKNNSID-----YINKDGSMPLDPAGDEY 176 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM--RGI 243 MN +K I + ++ + +G Sbjct: 177 KQMNG------------------------------KLKAEISEGVVMEYNVTAMEVLQGD 206 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 D+ + L + L + L + + L ++ RA +G + + + Sbjct: 207 VDLRKLLENIVNHLDSDDPKEINK-LYGEDLGNIDKALDNVLRIRAEVGAKQNRMEAAKE 265 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + N + +S V H + + L S + K+ + ++++YL Sbjct: 266 MNKETNFNMTEILSNIEDVNYAEKHMEFAVLQAVYISSLQTSAKILQPTLMDYL 319 >gi|146296675|ref|YP_001180446.1| flagellar hook-associated protein FlgL [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410251|gb|ABP67255.1| flagellar hook-associated protein 3 [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 315 Score = 74.0 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 110/352 (31%), Gaps = 41/352 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + I + + +M TG+ Y L + + I + Sbjct: 3 ITNNMMVNNFLINLNKNLNRLDDIQYKMATGKKIRYPSDDPVVTARSLRLRTDVSEIEQL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++ L+ + + +Q + V G A + + + Sbjct: 63 QKNVDDAMSWVDTTESALADINESLQRVRELAVRGANGTNTKEDMAQIAKEVAQIKQHII 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N G+Y+FSG + PLN + ++ + + V Sbjct: 123 QIGNTNYAGRYIFSGFKTDTAPLNSDGSF-----------------SDTGNFASNGGYPV 165 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + + F + A+ NI I A+ N + Sbjct: 166 DLSTGKNIIQF-----ELM-----------KANYININKTANQIFYIQGEADENKGNLFK 209 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 ++ + E +LS + + + ++ QR +G + + + L Sbjct: 210 VLDNLINALESGDV--------TTVNSLLSDIDRHIDNVVAQRGDVGALQNRLELIKNRL 261 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++N T +S + V+ QL T N + ++ ++L++L Sbjct: 262 SDENVNFTTLLSNNEDVDMAEIIMQLKTAENVYRAALRTGAQILPPTLLDFL 313 >gi|326202858|ref|ZP_08192725.1| flagellar hook-associated protein 3 [Clostridium papyrosolvens DSM 2782] gi|325986935|gb|EGD47764.1| flagellar hook-associated protein 3 [Clostridium papyrosolvens DSM 2782] Length = 309 Score = 74.0 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 108/355 (30%), Gaps = 52/355 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + M K ++ TG+ L+ + + I + Sbjct: 3 ITNNMLISNMLTALGNNESRMSKYQNQLYTGKKIQLPSDDPIVAARALKLRTDVSKIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + A L+ + I++ G +++ ++ V Sbjct: 63 QKNLGDAQSWVDATDAALAQIGNILKRAKELSTQAANGTNSSSETGDIGQEMKQLKVQLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN T G+Y+FSG + +K + + S G+ Sbjct: 123 HIANSTYSGRYMFSGFQTDQKLIED----------------------DETSTDFGKFKIG 160 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV---NMRG 242 ++ +++ + NI + + + +N N Sbjct: 161 VNIVPEKIQ-------------------FEIGEGDNININVTGGDVFNSGSNAVYGNEPS 201 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 + I + + S N G RN L + + ++ RA +G + I+ Sbjct: 202 M--IALFTNVIADLDSGN-NTGVRNQL-----DKFDEQVDNLLRVRADIGARQNRIDLSA 253 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + N + +SK+ + L N + S ++ + +++++L Sbjct: 254 DRMSNDLVNMTDLMSKNEDADPAETIMNLKMEENVYQASLAGGARIIQQTLVDFL 308 >gi|78485805|ref|YP_391730.1| flagellin-like [Thiomicrospira crunogena XCL-2] gi|78364091|gb|ABB42056.1| Flagellar hook-associated protein FlgL [Thiomicrospira crunogena XCL-2] Length = 341 Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 43/353 (12%), Positives = 121/353 (34%), Gaps = 16/353 (4%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +S++ + ++ + + E++ TG + + I + N I++ Sbjct: 3 VSSNQFHMQSFSAIEKHQNSVLDIQEKLTTGNRVNRPSDDPIATSQIHSLNKAVNTISQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + +LS ++ +S+ + Q + ++ G A + + Sbjct: 63 EKNGEFAKSQLSLEESQISTAVDLTQRARELSIQMMNGTYTAEDRQATAQEIGQIIKHLT 122 Query: 126 TFANMTDEGQ-YLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N + + LF+G N +S A + ++ N+ + + Sbjct: 123 GIMNSNNSEEELLFAGNNVDAAAAFVVDPANSGALQPGNEYYAYIGSANAGAQFDNR--- 179 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 ++ ++ + + DD+ ++ + + I S + Sbjct: 180 -ANFGSRFVQIGFDNDQTAAPDDKGDSSRVRITDNGAKVFNIPGGAT---SLPAGVDP-- 233 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 +++ V V + L + + + + G+ +Q+A +G + I + Sbjct: 234 NLLNVLVGLKDSLDQGNPPP------DAVADDLLSAVKGLSKQQAEIGSRQNRIQTQFEA 287 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 Q + + ++ +QL+ N ++M+ + +K+Q +S+ +YL Sbjct: 288 GQTFSMALQERRVNIEEMDVVEGISQLNMRQNALQMAQQVFSKVQGMSLFDYL 340 >gi|320354351|ref|YP_004195690.1| flagellar hook-associated protein 3 [Desulfobulbus propionicus DSM 2032] gi|320122853|gb|ADW18399.1| flagellar hook-associated protein 3 [Desulfobulbus propionicus DSM 2032] Length = 322 Score = 73.2 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 47/360 (13%), Positives = 112/360 (31%), Gaps = 41/360 (11%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK T +T + ++ + TG+ + A + +L ++ + Sbjct: 1 MKATQGTTYRMLGSRLNTVATQLEELRSIG---ATGKKLNNPSDDPASIRPVLNTRKQLS 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ L + + + HL ++ I+Q + + G ++ + A + Sbjct: 58 NVDRYLETMGKSLDTMQATDGHLEHVENIMQRAKEIMTNAINGSLNDADRSVLADEIAQI 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + AN G+YLF+G P + ++D L + + L Sbjct: 118 RKELLDAANGMVGGKYLFAGYEEDTVPF--------VTNPAYDPALYDPTDSTTWPYLYQ 169 Query: 181 QHLEVSSM---NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSAN 237 +S+ + + + D F W D I+ Sbjct: 170 GDENSTSLEITTGELIQVNLTGN-DLFFGTSSW--------DPANPNSIEPG-------- 212 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 R +F + E + A L+ ++ R+ LG Sbjct: 213 ------RYDLFAELTQAEEAIRANDQTAMQT----SLADLEGAAEQNRRLRSQLGNRASR 262 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + + +S+ + + + + + +T K+ +LSIL+++ Sbjct: 263 VETAMDYQEGVRVDLKQILSRYEDADAIESFNAIVQQETAFQAALNVTAKVSQLSILDFI 322 >gi|269103182|ref|ZP_06155879.1| flagellar hook-associated protein FlgL [Photobacterium damselae subsp. damselae CIP 102761] gi|268163080|gb|EEZ41576.1| flagellar hook-associated protein FlgL [Photobacterium damselae subsp. damselae CIP 102761] Length = 412 Score = 72.8 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 55/415 (13%), Positives = 131/415 (31%), Gaps = 65/415 (15%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWE---QEKN 60 + IST S + + + ++ TG+ D G S + + Q+ Sbjct: 2 SRISTLSQYNNLTSNLMRKQTQLSHTNNQLATGKRVD---TSGDDPVSSISIQNYKQQLT 58 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 I + + +L RL + +++ ++ + ++ +L G N L+ Sbjct: 59 QIGQYKDAITLANNRLGVLETNIAGVEDNLDVTKQKVLGMLNGAMAANDRKAFKDELQSL 118 Query: 121 YESFVTFANMTD-EGQYLFSGINSSEKPL------NGYFTKDSLAKKSFD-------QML 166 Y+ ++ AN D G Y+F+G KP Y + D + Sbjct: 119 YDGLLSLANSKDEAGNYIFAGNQMDTKPFIEKDGYMTYQGDSQSRQTQIDSNMNVKTSLP 178 Query: 167 QGFLEENSKSLLAGQHLEVSSMN--------AQQMTDF---------------------- 196 + + + + + + ++DF Sbjct: 179 GDQVFMDIPNPYGDFRPNFAGLTEGSKAHVLSADISDFSKAKAIQVSFSDGGTTAGPNGE 238 Query: 197 ----------IKQLE----DKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG 242 I E + ++ S A D + + + + D + Sbjct: 239 TVKVTNYSLSIDGTEVVKDQPYDPEKGIEYTGSTAGDPTLNLKFAEMQDGDTITLQPAQS 298 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 + T + + A+ L ++++ + G + +QR+ +G K + ++ Sbjct: 299 FNIFDSIQAAITYADAPTSSPEAQANL-QRVIDDLDAGFVHMNQQRSEVGSIMKQVERQQ 357 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++T ++ +A L+ ++ S ++ + LS+ NYL Sbjct: 358 EQHLDFELTLNTAHGGLEDLDYSSAVLDLNQQAMALQASQAAFSQTKNLSLFNYL 412 >gi|260892171|ref|YP_003238268.1| flagellar hook-associated protein 3 [Ammonifex degensii KC4] gi|260864312|gb|ACX51418.1| flagellar hook-associated protein 3 [Ammonifex degensii KC4] Length = 296 Score = 72.8 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 109/357 (30%), Gaps = 62/357 (17%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T + + + L L K EE+ +G+ + V S L + Sbjct: 1 MRVT--TNMLVTNFLRNLNSRL-DQIAKRQEELASGRRLNRPSDDPTGVMSALRLRAQLA 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + L+ ++A L VQ + V A + + Sbjct: 58 ENQQYHKNMADAVDWLNATEAALRDALATVQRVRELAVAGASDALPQGAREALAQEVEEL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 E AN T G+Y+F+G + P + + ++ ++ N+ S A Sbjct: 118 KEHLGNIANTTYGGRYIFAGTRTDLPPYSNGSLQSYPGGIEYEIAPATTIKVNTLSSEA- 176 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 V + A K + + + + ++D + D+S Sbjct: 177 --FSVPNATAN------KDIFEVLNQ---------------LSSDLRDGKTQDIS----- 208 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 + L + Q + +++ A +G K + Sbjct: 209 ------------------------------NQRLQELDQSIDNLLKVLAEVGAKVKRLEM 238 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L+ + +S++ + L T N + + +L + S++++L Sbjct: 239 GMERLETNEADLTRLLSQTEDADMARTIVDLKTQENVYRAALAVGARLLQPSLVDFL 295 >gi|312793869|ref|YP_004026792.1| flagellar hook-associated protein 3 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181009|gb|ADQ41179.1| flagellar hook-associated protein 3 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 315 Score = 72.8 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 105/353 (29%), Gaps = 43/353 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + I + + +M TG+ Y L + + I + Sbjct: 3 ITNNMMVNNFLINLNKNLSRLDDIQYKMATGKKIRYPSDDPVITARSLRLRTDVSEIEQL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + T + T+++ L+ + + +Q + V G A + + + Sbjct: 63 QKNVDDATSWVDTTESALADINESLQRVRELAVRGANGTNTKEDMAQIAKEVAQIKQHII 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLN-GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N G+Y+FSG + PLN D+ S N+ Sbjct: 123 QVGNTNYAGRYIFSGFKTDTAPLNSDGSFSDTGGFTSSGGYPIDLSTGNNIIQFELMKAN 182 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 +N F Q E + + + I E DV+ Sbjct: 183 YIGINKTANQIFYIQGEADENKGNLFK---------VLDNLINALESGDVNT-------- 225 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 +LS + + + ++ QR +G + + + Sbjct: 226 -------------------------VNSLLSDIDRHIDNVVAQRGDVGALQNRLELIKNR 260 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L + N T +S + V+ QL T N + ++ ++L++L Sbjct: 261 LSDDNVNFTTLLSNNEDVDMAEIIMQLKTAENVYRAALQTGAQILPPTLLDFL 313 >gi|153938132|ref|YP_001392017.1| flagellar hook-associated protein 3 [Clostridium botulinum F str. Langeland] gi|152934028|gb|ABS39526.1| flagellar hook-associated protein 3 [Clostridium botulinum F str. Langeland] gi|295320032|gb|ADG00410.1| flagellar hook-associated protein 3 [Clostridium botulinum F str. 230613] Length = 320 Score = 72.8 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 114/355 (32%), Gaps = 41/355 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + ++ ++++++ +G++ A V ++ + + Sbjct: 3 ITNKMMANSFMTDMNNNLENLNRINQQLTSGKNFSKPSHDPAGVIRSMQLYTGIDANKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S V L + L + K + + L + + S Sbjct: 63 NKNISNVINWLDVTDTALDQIGKQLGKIRDKLEEAGNPGFGETERKALKDEVNGIIASMS 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N T +G+Y+FSG + KP G + S D ++ + L E Sbjct: 123 QTLNTTFDGKYIFSGTRVTGKP-TGIQKDGTTKNNSID-----YVNRDGSMPLNPAGDEY 176 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM--RGI 243 MN +K I + ++ + G Sbjct: 177 KQMNG------------------------------KLKAEISEGVVMEYNVTATEVLEGD 206 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 D+ + + L N N L + L + + L ++ RA +G + ++ + Sbjct: 207 VDLRKLLENIVKHLDSN-DQSEINKLYGEDLGNIDKALDNVLRIRAGVGAKQNRMDAAKE 265 Query: 304 FLQNKNNI-IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + NI + +S V+ + + + L S + K+ + ++++YL Sbjct: 266 -MNKETNINMTEILSNIEDVDYAEKNMEFAVLQAVYISSLQTSAKVLQPTLMDYL 319 >gi|295690746|ref|YP_003594439.1| flagellar hook-associated protein FlgL [Caulobacter segnis ATCC 21756] gi|295432649|gb|ADG11821.1| flagellar hook-associated protein FlgL [Caulobacter segnis ATCC 21756] Length = 307 Score = 72.8 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 100/354 (28%), Gaps = 49/354 (13%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T +ST + M + ++ + + + + + + Sbjct: 2 TRVSTVQNYNVMTSNLMRAQIRQSDVGNQVSSQKVATDLKGYAKNAEMLTAMRSTQARLE 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + + LVT RL L + + + L + L+ ++ Sbjct: 62 GLISQSKLVTNRLQMQDTGLGKVADSTKSAREAIANAL----ASGSAQTMMQQLQAAFGD 117 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 V N G Y+FSG + + D + + + Sbjct: 118 VVQGLNTKSNGLYVFSGAKTDTATTSAAAMTDLTLAPTTASLFN----NDQYITTNRIDE 173 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + S+ F + D F Sbjct: 174 QTSAKTGVLGDAFGVSVFDAFKQ------------------------------------- 196 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + V + L D + K +L T G ++ + G+++K Sbjct: 197 ---VQAYVEANGPFTGKLND-VQVTFLKGLLPTFDAAYKGAVDAQGKNGVTQKRFESAET 252 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 LQN+ + + + + + V+ A +L + ++ S + + LQ+ S+LN L Sbjct: 253 DLQNQADTLTSMVGDIVDVDMADAVTRLESAKLAVQASAQVFSSLQQSSLLNVL 306 >gi|168180855|ref|ZP_02615519.1| flagellar hook-associated protein 3 [Clostridium botulinum NCTC 2916] gi|182668320|gb|EDT80299.1| flagellar hook-associated protein 3 [Clostridium botulinum NCTC 2916] Length = 320 Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 114/355 (32%), Gaps = 41/355 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + ++ ++++++ +G++ A V ++ + + Sbjct: 3 ITNKMMANSFMTDMNNNLENLNRINQQLTSGKNFSKPSHDPAGVIRSMQLYTGIDANKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S V L + L + K + + L + + S Sbjct: 63 NKNISNVINWLDVTDTALDQIGKQLGKIRDKLEEAGNPGFGETERKALKDEVNGIIASMS 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N T +G+Y+FSG + KP G + S D ++ + L E Sbjct: 123 QSLNTTFDGKYIFSGTRVTGKP-TGIQKDGTTKNNSID-----YVNRDGSMPLNPAGDEY 176 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM--RGI 243 MN +K I + ++ + G Sbjct: 177 KQMNG------------------------------KLKAEISEGVVMEYNVTATEVLEGD 206 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 D+ + + L N N L + L + + L ++ RA +G + ++ + Sbjct: 207 VDLRKLLENIVKHLDSN-DQSEINKLYGEDLGNIDKALDNVLRIRAGVGAKQNRMDAAKE 265 Query: 304 FLQNKNNI-IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + NI + +S V+ + + + L S + K+ + ++++YL Sbjct: 266 -MNKETNINMTEILSNIEDVDYAEKNMEFAVLQAVYISSLQTSAKVLQPTLMDYL 319 >gi|170760719|ref|YP_001788055.1| flagellar hook-associated protein 3 [Clostridium botulinum A3 str. Loch Maree] gi|169407708|gb|ACA56119.1| flagellar hook-associated protein 3 [Clostridium botulinum A3 str. Loch Maree] Length = 320 Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 114/355 (32%), Gaps = 41/355 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + ++ ++++++ +G++ A V ++ + + Sbjct: 3 ITNKMMANSFMTDMNNNLENLNRINQQLTSGKNFSKPSHDPAGVIRSMQLYTGIDANKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S V L + L + K + + L + + S Sbjct: 63 NKNISNVINWLDVTDTALDQIGKQLGKIRDKLEEAGNPGFGETERKALKDEVNGIIASMS 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N T +G+Y+FSG + KP G + S D ++ + L E Sbjct: 123 QTLNTTFDGKYIFSGTRVTGKP-TGIQKDGTTKNNSID-----YVNRDGSMPLDPAGDEY 176 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM--RGI 243 MN +K I + ++ + G Sbjct: 177 KQMNG------------------------------KLKAEISEGVVMEYNVTATEVLEGD 206 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 D+ + + L N N L + L + + L ++ RA +G + ++ + Sbjct: 207 VDLRKLLENIVKHLDSN-DQSEINKLYGEDLGNIDKALDNVLRIRAGVGAKQNRMDAAKE 265 Query: 304 FLQNKNNI-IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + NI + +S V+ + + + L S + K+ + ++++YL Sbjct: 266 -MNKETNINMTEILSNIEDVDYAEKNMEFAVLQAVYISSLQTSAKVLQPTLMDYL 319 >gi|170757647|ref|YP_001782345.1| flagellar hook-associated protein 3 [Clostridium botulinum B1 str. Okra] gi|169122859|gb|ACA46695.1| flagellar hook-associated protein 3 [Clostridium botulinum B1 str. Okra] Length = 320 Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 113/354 (31%), Gaps = 39/354 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + ++ ++ +++ +G++ A V ++ + + Sbjct: 3 ITNNMMANSFMTDMNNNLENLDRIRQQLTSGKNFSKPSHDPAGVIRSMQLYSGIDANKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S V L + L + K + + L + + S Sbjct: 63 NKNISNVINWLDVTDTALDQIGKQLGKIRDKLEEAGNPGFGETERKALKDEVNGIIASMS 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N T +G+Y+FSG + KP G + S D ++ + L E Sbjct: 123 QSLNTTFDGKYIFSGTRVTGKP-TGVQKDGTTKNNSID-----YVNRDGSMPLDPAGDEY 176 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM--RGI 243 +QM +K I + ++ + G Sbjct: 177 -----KQME-------------------------GKLKAEISEGVVMEYNVTATEVLEGG 206 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 D+ + + L + + L + L + + L ++ RA +G + + + Sbjct: 207 GDLRKLLEDIVKHLDSD-DQSEISKLYGEDLGNIDKALDNVLRIRAEVGAKQNRMEAAKE 265 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + N + +S ++ + + + L + S + K+ + ++++YL Sbjct: 266 MNKETNFNLHEILSNIEDIDLVEKNMEYAILQSVYISSLQTSAKILQPTLMDYL 319 >gi|154252986|ref|YP_001413810.1| hypothetical protein Plav_2544 [Parvibaculum lavamentivorans DS-1] gi|154156936|gb|ABS64153.1| conserved hypothetical protein [Parvibaculum lavamentivorans DS-1] Length = 497 Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 80/226 (35%), Gaps = 8/226 (3%) Query: 140 GINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLA--GQHLEVSSMNAQQMTDFI 197 G +++ N D+ + L+ + + ++ Sbjct: 272 GTDAATTAANFQAALDTAVQTEASVTLKAASAVEASNNFFDYQAGGSPQRVDGPPFASAT 331 Query: 198 KQLEDKFSDDEYW-ANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF 256 + +D +W + S + +N+ +I + A + IRD + ++ + + Sbjct: 332 GLRDATDADTVFWYKGDLSGTAGNNMVAQIDSGRQVSYGARADQAAIRDTLKMSALLSAV 391 Query: 257 LSKNLTD----GARNVLTKKMLSTVQ-QGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + D + L+ ++ + +G+ + LG++ ++ + Sbjct: 392 EYSDADDLSQRKSYAALSTRVGDKLSFKGVQSLESIVTGLGLTAATLSNTQDRHDLVMAT 451 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + + +L+ L +++ SY +T L ++S+ NYL Sbjct: 452 SNELLGDIQNADDYEVGVKLTMLQTQLQASYQVTAMLSQMSLANYL 497 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 76/216 (35%), Gaps = 6/216 (2%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST S + + L ++ TG +D +LG +L + N I+ Sbjct: 3 ISTLSQSLALRQSINNMRAQFDDLQRQLSTGLKTDSYAKLGTDRNVVLSLSHQLNQISAY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 ++ S R+ L+ + I +M V+ + N K ++ V Sbjct: 63 TNTISKTQMRIEVMSDALTRVNSISSEM-KTGVLTSGFELVNGKQTTAQISAAMQFDEMV 121 Query: 126 TFANMTDEGQYLFSGINSSEKP--LNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ-H 182 N+ E +YLF G+++ +P L S AK Q + + + + G+ Sbjct: 122 NLMNLQVEDRYLFGGVDTQTRPVALPDEIMNGSGAKAGLKQFIDERAQADMGADGRGRLT 181 Query: 183 LEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNAS 218 L ++ D + E + SNA+ Sbjct: 182 LGIAGATVTLAEDAAPSIFG--FKLEGATSTLSNAT 215 >gi|294508670|ref|YP_003572729.1| flagellar hook-associated protein FlgL [Salinibacter ruber M8] gi|294344999|emb|CBH25777.1| flagellar hook-associated protein FlgL [Salinibacter ruber M8] Length = 320 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 111/337 (32%), Gaps = 39/337 (11%) Query: 21 ELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQ 80 L +D +L E++ +G+ + + + + N +A R S + + +Q Sbjct: 23 RLQRDISRLREQISSGKRINRPSDDPSSFATAERMKTLGNQLARREESIASARTFVDRTQ 82 Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSG 140 L + + V + + A LR V N T +G+Y+F+G Sbjct: 83 QELDGLADLFTRAREDGVRAADDTRSADDRAAIANELRSIKGEVVDRMNSTQDGEYIFAG 142 Query: 141 INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQL 200 + +P + S + L+ + + +++ + + + Sbjct: 143 NRTDTQP---FGADGSANDAAPINGSLDALDGDRTRPIGKNQDLTVNVDGKALAQY---- 195 Query: 201 EDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKN 260 D +A + I + + + + Sbjct: 196 --------------------------------DTTAGGDPETITGALDNLIKAVDPADNS 223 Query: 261 LTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 G + L V+ L +I + + G + ++ + ++ + + S + Sbjct: 224 PPSGPPDPDISTALGEVEDALDHVISKGSEAGAIGRRLSTAQEQVEAASLEANERRSDAE 283 Query: 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + TA ++L +++ ++ T+ Q+ S++N+L Sbjct: 284 DTDLATAISELQQRQTQLQAAFQATSSSQQTSLVNFL 320 >gi|312135424|ref|YP_004002762.1| flagellar hook-associated protein 3 [Caldicellulosiruptor owensensis OL] gi|311775475|gb|ADQ04962.1| flagellar hook-associated protein 3 [Caldicellulosiruptor owensensis OL] Length = 315 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 104/353 (29%), Gaps = 43/353 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + I + + +M TG+ Y L + + I + Sbjct: 3 ITNNMMVNNFLINLNKNLSRLDDIQYKMATGKKIRYPSDDPVVTARSLRLRTDVSEIEQL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + +++ L+ + + +Q + V G A + + + Sbjct: 63 QKNVDDAISWVDITESALADITENLQRVRELTVRGANGTNTKEDMAQIAKEVAQIKQHII 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLN-GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N G+Y+FSG + P+N D+ + S N+ Sbjct: 123 QVGNTNYAGRYIFSGFKTDTAPINPDGSFSDTGSFTSSGGYPIDLSTGNNIIQFELMKAN 182 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 +N F Q E + + +D N G Sbjct: 183 YIGINKTANQIFYIQGEADENKGNLFK-------------------VLDNLINALESG-- 221 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 ++ +LS + + + ++ QR +G + + + Sbjct: 222 ---------------DVNT------VNSLLSNIDRHIDNVVAQRGDVGALQNRLELIKNR 260 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L + N T +S + V+ QL T N + ++ ++L++L Sbjct: 261 LSDDNVNFTTLLSNNEDVDMAEIIMQLKTAENVYRAALQTGAQILPPTLLDFL 313 >gi|312877568|ref|ZP_07737527.1| flagellar hook-associated protein 3 [Caldicellulosiruptor lactoaceticus 6A] gi|311795643|gb|EFR12013.1| flagellar hook-associated protein 3 [Caldicellulosiruptor lactoaceticus 6A] Length = 315 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 105/353 (29%), Gaps = 43/353 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + I + + +M TG+ Y L + + I + Sbjct: 3 ITNNMMVNNFLINLNKNLSRLDDIQYKMATGKKIRYPSDDPVITARSLRLRTDVSEIEQL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + T + T+++ L+ + + +Q + V G A + + + Sbjct: 63 QKNVDDATSWVDTTESALADVNESLQRVRELAVRGANGTNTKEDMAQIAKEVAQIKQHII 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLN-GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N G+Y+FSG + PLN D+ S N+ Sbjct: 123 QVGNTNYAGRYIFSGFKTDTAPLNSDGSFSDTGGFTSSGGYPIDLSTGNNIIQFELMKAN 182 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 +N F Q E + + + I E DV+ Sbjct: 183 YIGINKTANQIFYIQGEADENKGNLFK---------VLDNLINALESGDVNT-------- 225 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 +LS + + + ++ QR +G + + + Sbjct: 226 -------------------------VNSLLSDIDRHIDNVVAQRGDVGALQNRLELIKNR 260 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L + N T +S + V+ QL T N + ++ ++L++L Sbjct: 261 LSDDNVNFTTLLSNNEDVDMAEIIMQLKTAENVYRAALQTGAQILPPTLLDFL 313 >gi|157738147|ref|YP_001490831.1| flagellar hook-associated protein FlgL [Arcobacter butzleri RM4018] gi|157700001|gb|ABV68161.1| flagellar hook-associated protein FlgL [Arcobacter butzleri RM4018] Length = 376 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 97/306 (31%), Gaps = 32/306 (10%) Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSG 140 + +S+++ ++ + L+ T A L ++ + AN EGQYLFSG Sbjct: 73 SAISTVKLKLESVKEELIKANTSTTSIEGLEAIAQNLSGYKQNLLDLANTQVEGQYLFSG 132 Query: 141 INSSEKPLN-------GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQM 193 +SS K Y DSL K + D+ G E+ + L + +S + + Sbjct: 133 SDSSVKAFTMDANGKVTYNGNDSLRKIAVDE---GSYRESGVNGLELFYYTANSASKGET 189 Query: 194 TDFIKQLEDKFSDDEYWA----------NNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 F + W NW + D N G Sbjct: 190 LTFEDADRILDQEGNEWTLDTATNILSKKNWDGSFDTLTVTPPTAPATEYSVTVPNTDGT 249 Query: 244 RDIMFVAVI------------GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVL 291 R +V + LT R + + + + A L Sbjct: 250 RFEAKRSVFDLLDDAVSSLKGLDSSGNATLTYEQRRAGISSAQDEIDKANNNVSIAHADL 309 Query: 292 GISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 G K N +++K + + ++ +L +L Y ++ +L Sbjct: 310 GARNKTFNNSLDIIESKISQYNKTYTEIGSSNLTEVGIKLKSLELMFSALYSTISQTNQL 369 Query: 352 SILNYL 357 S++NY+ Sbjct: 370 SLVNYM 375 >gi|258512521|ref|YP_003185955.1| flagellin domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479247|gb|ACV59566.1| flagellin domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 325 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 53/339 (15%), Positives = 107/339 (31%), Gaps = 37/339 (10%) Query: 22 LNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQA 81 +N + EE+ TG+ + V+ ++ E + ++ L + S ++ +Q Sbjct: 19 INTAMQNVQEELSTGKVLNLPQDDPVAVSEDMDLSAEVSQVSASLSTISTGLSWMNATQT 78 Query: 82 HLSSMQKIVQDMVGPLVILLEGKT-DNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSG 140 + + +Q + +V L A + + A+ +YLF G Sbjct: 79 AIQGIISQLQQIQSDIVAALNTPNQSQGGLAGYAATVSQLIQGVYQIADQMVGNRYLFGG 138 Query: 141 INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQL 200 ++ + +L+ + + + D Sbjct: 139 -------------------QADNTAPTTYLKTSPTDTPQPIPPGAGPSSGSRSYDPFDD- 178 Query: 201 EDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKN 260 S AS NI Y+I D + V+ + A + L+ Sbjct: 179 --------------SQASPPNINYQIADGVSVRVTVTAYDLFLVQPSSTAPNLQDTLNNI 224 Query: 261 LTD--GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 TD + K+ LS +Q L+ +I A LG + + + L + Sbjct: 225 QTDIYSGNSGNLKQDLSDLQVNLNQVINLNAALGARIQRMTAAQNQLTQYQTNLTDLKGG 284 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 G + Q ST E + + ++ S++NYL Sbjct: 285 IEGADMARVLTQFSTDQVIYEAALQMGAQILLPSLVNYL 323 >gi|251799724|ref|YP_003014455.1| flagellar hook-associated protein 3 [Paenibacillus sp. JDR-2] gi|247547350|gb|ACT04369.1| flagellar hook-associated protein 3 [Paenibacillus sp. JDR-2] Length = 319 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 99/347 (28%), Gaps = 38/347 (10%) Query: 11 IFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNS 70 + +M KL ++ TG++ + +T L + E + ++ Sbjct: 10 MSSQMLGNITNNLNSMNKLQNQLATGKAINKPSDDPIGITFALRYRGEIASNDQYTDNSD 69 Query: 71 LVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANM 130 L + IVQ +V G + + Y V N Sbjct: 70 AALSSLEYMDTTIGQATDIVQRFRELIVKGSNGTLEQTSMTAIQTEVSQLYNQMVEIGNS 129 Query: 131 TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNA 190 G+ +F+G + KP + A + + N Sbjct: 130 QFNGKQMFNGEQTGVKP------------------YSTLGLDQQSDPSADPPILKAFSNQ 171 Query: 191 QQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVA 250 +L + D N + D S + + + Sbjct: 172 TDTGSIQYELSPGMTMDVNMTGN-----------DVFGAPVADESDTTSDNLFQLMHRAY 220 Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 + + LT +L + ++ ++ RA +G + + L + + Sbjct: 221 DMLGSGDQEGLTG---------LLGQIDTRMNTMLTARAQVGARVNRVEIVQGRLSDVDI 271 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + K V+ A ++TL N + S K+ + S++++L Sbjct: 272 NLQQMQQKVEDVDMAEAITNITTLENVYQASLSAGAKIIQPSLVDFL 318 >gi|315636290|ref|ZP_07891540.1| flagellar hook-associated protein FlgL [Arcobacter butzleri JV22] gi|315479379|gb|EFU70062.1| flagellar hook-associated protein FlgL [Arcobacter butzleri JV22] Length = 376 Score = 71.7 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 96/308 (31%), Gaps = 36/308 (11%) Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSG 140 + +S+++ ++ + L+ T A L ++ + AN EGQYLFSG Sbjct: 73 SAISTVKLKLESVKEELIKANTSTTSIEGLEAIAQNLSGYKQNLLDLANTQVEGQYLFSG 132 Query: 141 INSSEKPLN-------GYFTKDSLAKKSFDQML---QGFLEENSKSLLAGQHLEVSSMNA 190 +SS K Y DSL K + D+ G + A + ++ Sbjct: 133 SDSSVKAFTMDANGKVTYNGNDSLRKIAVDEGSYRESGVNGLDLFYYTANSASKGENLTF 192 Query: 191 QQMTDFIK--------QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV-NMR 241 ++ + + W + S + S + N Sbjct: 193 EEGDRILDQEGNEWTLDTVANTLSKKNWDGTFDTLSVTP-----PTAPATEYSVTIPNTD 247 Query: 242 GIRDIMFVAVI------------GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRA 289 G R +V + LT R + + + + A Sbjct: 248 GTRFEAKRSVFDLLDDAVSSLKGLDSSGNATLTYEERRAGISSAQDEIDKANNNVSIAHA 307 Query: 290 VLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQ 349 LG K + +++K + + ++ +L +L Y ++ Sbjct: 308 DLGARNKTFDNSLDIIESKISQYNKTSTEIGSSNLTEVGIKLKSLELMFSALYSTISQTN 367 Query: 350 KLSILNYL 357 +LS++NY+ Sbjct: 368 QLSLVNYM 375 >gi|134280688|ref|ZP_01767398.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 305] gi|125657225|gb|ABN48713.1| flagellin and related hook-associated protein [Burkholderia pseudomallei] gi|134247710|gb|EBA47794.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 305] Length = 304 Score = 71.3 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 117/354 (33%), Gaps = 54/354 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+++ M + ++ + M T + + + + + Sbjct: 3 ITSNQYHSIMTQVNRQATAGLMDTQIRMATEKRILRPSDDPTGAVRLAMLVRADAMLDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQD-MVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + +++ RL S+ +S + +Q+ V L ++G A +L ++ Sbjct: 63 RATGAMLNSRLQHSERVMSGIVDQLQNEAVKHLGFAMDGSRSPEDLSAYAQVLASVRDTL 122 Query: 125 VTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + AN D G YLFSG + P+ ++ +F+ L E +++ Sbjct: 123 LQSANTRDSSGNYLFSGTAITTAPIRFDPAAPVGSRYTFEGNL-----EKQTAVVGDGVT 177 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 EV++ + +M D + L++ + + +AN N Sbjct: 178 EVANESLAEMADGLNALDEAIAKMS------------------------EPNANPNDPAY 213 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 RD + + T++ L+ + + +G ++ + Sbjct: 214 RD-----------------------VLGRATDTIESVLASVNAKIGRMGSTQARLQMLDE 250 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + + + + + ++ S + ++ +L++LN L Sbjct: 251 LHESAQIVGNQAALDVGKISPEEVFTDYQSYMVALQASQKLYAEVTQLTLLNVL 304 >gi|326402282|ref|YP_004282363.1| hypothetical protein ACMV_01340 [Acidiphilium multivorum AIU301] gi|325049143|dbj|BAJ79481.1| hypothetical protein ACMV_01340 [Acidiphilium multivorum AIU301] Length = 353 Score = 71.3 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 99/311 (31%), Gaps = 12/311 (3%) Query: 47 ARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTD 106 L + + + + ++ Q + ++ I + + Sbjct: 55 GSAGQTLILNSSIATLNNTISNLKIAQGQMGVQQNAIQTISDIASKALTQFEGV--NSLS 112 Query: 107 NNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQML 166 + A R + + N D +Y+FSG +S+ P+ + S A Sbjct: 113 GSALSTAAATARSAVTQIASLLNSQDGTRYIFSGQDSTIPPVPNATSFTSAA------FY 166 Query: 167 QGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRI 226 + ++G S+ + + S + N I Sbjct: 167 VSIQSATNSLSVSGVFAAASNTTNSPFSSTLASNPGVPSVLGAGGVPITTGIAANANQFI 226 Query: 227 KDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIE 286 + G + + + + DI+ L++ + +++ ++ + + Sbjct: 227 GPSVGTNTTGSY----MTDILATLSAIGSLQPGQLSNSGFTNFANAISTSLGNAINTMAQ 282 Query: 287 QRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITT 346 LG ++ +N + LQ +N ++ V+ +QLS +++ SY + Sbjct: 283 DAGALGNNQALVNTQITDLQQTSNAFTNQVAGFDQVDMTKTLSQLSATQTQLQASYQLIA 342 Query: 347 KLQKLSILNYL 357 ++ +S+ Y+ Sbjct: 343 AVKTMSLTQYI 353 >gi|325295213|ref|YP_004281727.1| flagellar hook-associated protein 3 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065661|gb|ADY73668.1| flagellar hook-associated protein 3 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 316 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 59/338 (17%), Positives = 120/338 (35%), Gaps = 41/338 (12%) Query: 20 KELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTS 79 ++ + D + EE+ +G+ Y L +++ + + + + L +L T+ Sbjct: 17 RKRSVDLTRKTEELSSGKKLLYPSDNPVDAARALRFKKLISTLNQYNRNIDLAKTQLETA 76 Query: 80 QAHLSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 ++ L ++ + Q+ +V I+ G + ++ + + +N Y+F Sbjct: 77 ESALDTIINVSQEARAKIVQIMNTGVINEDEAKTLKDYFENLKSYIIGQSNTKVADHYIF 136 Query: 139 SGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 G+ + KP N D QG +E + ++ G + Sbjct: 137 GGVKTQTKPFND------------DGTYQGETQETTIAIANGVETNTT------------ 172 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLS 258 F+ EY N+S+ +I E ID ++ G + I + Sbjct: 173 -----FNGKEYLGVNYSS-------NKILIVEVIDKIISLIDSGNLQQLNSITIDVDL-- 218 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 D N + K+L +GLS I+E R+++G +V +N +SK Sbjct: 219 --TNDSTNNPTSIKLLDAFDKGLSKIMEYRSIIGTKIGTAENLKVQNENMRLHYSNLVSK 276 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 + A A+ E + + LS+L Y Sbjct: 277 IEDADYTAAIAEYEKAKTAYEALLATIQQTKDLSLLKY 314 >gi|125974727|ref|YP_001038637.1| flagellar hook-associated protein FlgL [Clostridium thermocellum ATCC 27405] gi|256005262|ref|ZP_05430229.1| flagellar hook-associated protein 3 [Clostridium thermocellum DSM 2360] gi|281418804|ref|ZP_06249823.1| flagellar hook-associated protein 3 [Clostridium thermocellum JW20] gi|125714952|gb|ABN53444.1| flagellar hook-associated protein 3 [Clostridium thermocellum ATCC 27405] gi|255990813|gb|EEU00928.1| flagellar hook-associated protein 3 [Clostridium thermocellum DSM 2360] gi|281407888|gb|EFB38147.1| flagellar hook-associated protein 3 [Clostridium thermocellum JW20] gi|316941861|gb|ADU75895.1| flagellar hook-associated protein 3 [Clostridium thermocellum DSM 1313] Length = 302 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 101/339 (29%), Gaps = 57/339 (16%) Query: 21 ELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQ 80 + K + + TG+ L+ + I + + L ++ Sbjct: 18 KNLARMDKYQQMLATGKKITVPSDDPVVAARALKLRTDVAQIEQYKTNVQDAMSWLEITE 77 Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSG 140 + ++++ I+Q V G T + + AN T G+Y+FSG Sbjct: 78 SAVANVGDILQRARELAVQASSGTTTEEDTKKIKQEVEQLKNQLIKIANSTYAGRYIFSG 137 Query: 141 INSSEKPLNG--YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 ++ + ++ YFT D ++ G ++ I Sbjct: 138 FKTNTRLMDDDGYFTMDVANSEAI-------------IYQIGISDSIN----------IN 174 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLS 258 + ID A + I D + + Sbjct: 175 VPGGDLFNGG-----------------------IDAGAGGKGKLIADF-EAYINALDSGD 210 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 +L A ++ + + L+ ++ RA +G + L + +S+ Sbjct: 211 HSLISDA--------ITNIDENLNHVLRIRADIGARYNRLELTADRLDIDSINFRKLMSE 262 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + V+Q L T N S ++ + S++++L Sbjct: 263 NEDVDQAENILLLKTEENVYRASLSGGARIIQTSLVDFL 301 >gi|312622117|ref|YP_004023730.1| flagellar hook-associated protein 3 [Caldicellulosiruptor kronotskyensis 2002] gi|312202584|gb|ADQ45911.1| flagellar hook-associated protein 3 [Caldicellulosiruptor kronotskyensis 2002] Length = 315 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 114/353 (32%), Gaps = 43/353 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + I + + +M TG+ Y L + + I + Sbjct: 3 ITNNMMVNNFLINLNKNLSRLDDIQYKMATGKKIRYPSDNPVITARSLRLRTDVSEIEQL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++ L+ + + +Q + V G A + + + Sbjct: 63 QKNVDDAISWVDTTESALADINESLQRVRELAVRGANGTNTKEDMAQIAKEVAQIKQHII 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N G+Y+FSG + P+N + F + NS G +++ Sbjct: 123 QVGNTNYAGRYIFSGFKTDTAPINSDGS---------------FSDTNSFDSTGGYPIDL 167 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYR-IKDTEGIDVSANVNMRGIR 244 S + + F +K I + + + Sbjct: 168 S--TGKNIIQF-----------------------ELMKANYISINKTANQVFYIQGETDE 202 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + + ++ + A +V +LS + + + ++ QR +G + + + Sbjct: 203 NKGNLFKVLDNLINALESGDATSV--NSLLSDIDRHIDNVVAQRGDVGALQNRLELIKNR 260 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L + N T +S + V+ QL T N + ++ ++L++L Sbjct: 261 LSDDNVNFTTLLSNNEDVDMAEIIMQLKTAENVYRAALQTGAQILPPTLLDFL 313 >gi|197104257|ref|YP_002129634.1| flagellin [Phenylobacterium zucineum HLK1] gi|196477677|gb|ACG77205.1| flagellin [Phenylobacterium zucineum HLK1] Length = 310 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 105/356 (29%), Gaps = 48/356 (13%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T +ST + + + ++ E++ T ++ + K Sbjct: 1 MVTRVSTPGNYAAVLANLLGAQQRQMQAGEKVSTQKNGTDLKDYARDAEMLTAMRSLKAR 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I N+ + +RLST L+ + Q + + + + + L + Sbjct: 61 IEVYQEQNTFIAERLSTQDTALNRIADAAQGVRQAIAEAI----ASGRVDTLMEDLEAQF 116 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 + N G+YLF+G +P+ + S +A Sbjct: 117 RNAAEGMNARYGGKYLFAGGQVDTRPMTA----------------TALSDLTSGPPIANW 160 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 S + + ++ + +DD + + I Sbjct: 161 FKNDSFLTSAKVDEATTVSTGILADDVG-------------TDMLAAFQTIQAFHEGGSG 207 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 M A+ + L+T + A G+ +K + Sbjct: 208 PFTGAM---------------TDAQRTFLEGQLATWDGVREDVTNVAARNGMIQKRVETV 252 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 R L+ ++N + + + A AQL ++ + + T LQ+ S+L+ L Sbjct: 253 REDLKTRDNALAGMMGDITDADMAEAVAQLQQAQLSVQAAAHVFTTLQESSLLSIL 308 >gi|308186400|ref|YP_003930531.1| Flagellar hook-associated protein 3 (HAP3) [Pantoea vagans C9-1] gi|308056910|gb|ADO09082.1| Flagellar hook-associated protein 3 (HAP3) [Pantoea vagans C9-1] Length = 321 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 109/349 (31%), Gaps = 36/349 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ IFE+ + +K E++ +G+ + + + Q + + Sbjct: 3 ISTNMIFEQQVRGITDSQASWLKSGEQLSSGRRVNNPSDDPIAASRAVVLSQTQQQGKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + LS + L + + G +V G ++ A L + Sbjct: 63 ALARTFAEQGLSLEENTLKGVTDGIIAAQGLIVNGSTGTLSDSDRGSIATQLEGIRAQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN D G+Y+F+G + P D + Q + ++ Sbjct: 123 NQANSQDANGRYIFAGYKTDSAPFVDTAGTGVSYAGGTDAITQKVDTSRTMTVGHTGDNI 182 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 +++ E ++ N+ + Sbjct: 183 FMAISGN-----------------------------------ATKEPDGSASETNVFKML 207 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 D A+ + + T K + L+ ++ R+ +G I+ Sbjct: 208 DSAIAALKVPQDDADAATKQTFQDAMDKTNRGLGNSLNNVLTVRSEIGTQLSEIDTLNAQ 267 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 +++ I + +S + V+ A + + ++ SY T + K+S+ Sbjct: 268 GDDRSVIYSSQMSDLVNVDLTEAASSYTMQQTALQASYKTFTDMSKMSL 316 >gi|254182887|ref|ZP_04889480.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 1655] gi|184213421|gb|EDU10464.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 1655] Length = 304 Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 117/354 (33%), Gaps = 54/354 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+++ M + ++ + M T + + + + + Sbjct: 3 ITSNQYHSIMAQVNRQATAGLMDTQIRMATEKRILRPSDDPTGAVRLAMLVRADAMLDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQD-MVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + +++ RL S+ +S + +Q+ V L ++G A +L ++ Sbjct: 63 RATGAMLNSRLQHSERVMSGIVDQLQNEAVKHLGFAMDGSRSPEDLSAYAQVLASVRDTL 122 Query: 125 VTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + AN D G YLFSG + P+ ++ +F+ L E +++ Sbjct: 123 LQSANTRDSSGNYLFSGTAITTAPIRFDPAAPVGSRYTFEGNL-----EKQTAVVGDGVT 177 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 EV++ + +M D + L++ + + +AN N Sbjct: 178 EVANESLAEMADGLNALDEAIAKMS------------------------EPNANPNDPAY 213 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 RD + + T++ L+ + + +G ++ + Sbjct: 214 RD-----------------------VLGRATDTIESVLASVNAKIGRMGSTQARLQMLDE 250 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + + + + + ++ S + ++ +L++LN L Sbjct: 251 LHESAQIVGNQAALDVGKISPEEVFTDYQSYMVALQASQKLYAEVTQLTLLNVL 304 >gi|254419611|ref|ZP_05033335.1| hypothetical protein BBAL3_1921 [Brevundimonas sp. BAL3] gi|196185788|gb|EDX80764.1| hypothetical protein BBAL3_1921 [Brevundimonas sp. BAL3] Length = 321 Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 98/356 (27%), Gaps = 39/356 (10%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T ++T+ ++ + + E M + + + G + + + Sbjct: 2 TRVATAGNYQSALLNLMTAQSRAELAQERMGSEKIATDMAGYGRGAEQLTSLTSTQARLE 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + + RLS + + + + L L Y++ Sbjct: 62 GFIGAGESAAARLSAQDLAMGRIYEAGTGAREAIANGL----AAGSITNLMTELGLHYQN 117 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 N +G YLFSG P D A + + Sbjct: 118 VQGGLNAEHQGSYLFSGGRGDVAPATAKTMADLAA-----------APSTASTFANDSLK 166 Query: 184 EVSSMNAQQMTD--FIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 + S ++ M + F+ + + N++ T I Sbjct: 167 QKSRIDENTMVETGFLADEIGGPLTEVF----------RNMQAYQNGTPVIIDGVTYTPT 216 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 G+ + ++ + + G+ Q A G+ + ++ Sbjct: 217 GVGTL------------TGQPGAGVTAFLNAQMTQLDKANQGVTNQNAKNGLVQNHVESA 264 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +++ +D + K G + A L I+ S + L+ S+L+ L Sbjct: 265 LEAHESQKIALDKMMLKKTGYDPAQAVTDLQMAQVAIQASAQVINSLRSTSLLDLL 320 >gi|325288762|ref|YP_004264943.1| flagellar hook-associated protein 3 [Syntrophobotulus glycolicus DSM 8271] gi|324964163|gb|ADY54942.1| flagellar hook-associated protein 3 [Syntrophobotulus glycolicus DSM 8271] Length = 304 Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 107/336 (31%), Gaps = 51/336 (15%) Query: 22 LNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQA 81 KL +M TG + + L + + +A+ + ++T+ + Sbjct: 19 AQGKLDKLQNQMSTGLRIFRPSDDPVGIENALRLKGNLSMVAQYQKNAGEALNYMNTTDS 78 Query: 82 HLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGI 141 L + K++Q ++ G N+ A + + E AN +YLF+G Sbjct: 79 VLGDLTKMIQRAQELVLSANNGTNSLNERNAIAQEISEINEQVKALANTKVGNKYLFAGT 138 Query: 142 NSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLE 201 + + P++G + FD ++ M D Sbjct: 139 KTEQAPMSGGTWSGNTDSVQFDVG--------------------ENIKISIMVDG----- 173 Query: 202 DKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNL 261 + + +A I A + + TE + Sbjct: 174 QQLFTTPNGTYSLLSA-------------TITTPAGTSDGIFDQL------LTELGGSD- 213 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 ++ ++L ++ Q L + RA LG + + L + N + +S Sbjct: 214 ------SISGEVLDSLDQNLQNVTALRAELGARTNRLESIQSQLASMNYNLQANLSNVED 267 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V+ A + +N + + + ++ + S+++++ Sbjct: 268 VDMAKAITDFTNQVNVYQSALAVGARIIQPSLVDFM 303 >gi|120554040|ref|YP_958391.1| flagellar hook-associated protein FlgL [Marinobacter aquaeolei VT8] gi|120323889|gb|ABM18204.1| flagellar hook-associated protein 3 [Marinobacter aquaeolei VT8] Length = 410 Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 58/407 (14%), Positives = 120/407 (29%), Gaps = 55/407 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS+ IF +++N + V +++ TG+ + IL+ +QE Sbjct: 4 ISSQQIFSGGINRLQDINSNLVNTQQQLSTGKKVNKPSDDPVAAARILKLDQELQRSETY 63 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + +L RL ++ L+S I+Q + V G N + L++ Sbjct: 64 GRNANLADNRLKQEESTLASAVDIIQRVRELTVQAGNGSLSANDRQSISAELKERLGQLA 123 Query: 126 TFANMTD-EGQYLFSGINSSEK-----------------------------PLNGY---- 151 AN D G+Y+FSG S P++ + Sbjct: 124 NIANTRDASGEYIFSGFQGSTPAFAQNDDGKWVYQGDEGQRVLEIDDGVTVPISDHGKGI 183 Query: 152 --------FTKDSLAKKSF------------DQMLQGFLEENSKSLLAGQHLEVSSMNAQ 191 F K S + + + ++ + ++A Sbjct: 184 FVDVAKGVFAKGSTSVDGYISNLEFVAPKDMTDAFSPRVPDDFDIAVTANGAGDLEISAS 243 Query: 192 QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAV 251 I + + A +D + + N I + Sbjct: 244 YTRGGIIYPLAVEPAGALVGDEFQVAGVKLTINDAQDGDTFTLGVNDKQSVFGTIENLIA 303 Query: 252 IGTEFL-SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 + + + L + L + II ++ LG + FL++ Sbjct: 304 GLDGISKTTPKSSAEYDALIAETLVNLDNAQESIILKQTELGGRLNAVESTTAFLEDSAL 363 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S+ V+ A + LS ++ + ++ +LS+ + L Sbjct: 364 YTKEIRSQLQDVDYAEAISNLSFQSFVLQAAQQSFAQVSQLSLFDRL 410 >gi|167905096|ref|ZP_02492301.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei NCTC 13177] Length = 304 Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 117/354 (33%), Gaps = 54/354 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+++ M + ++ + M T + + Q + + Sbjct: 3 ITSNQYHSIMTQVNRQATAGLMDTQIRMATEKRILRPSDDPTGAVRLAMLVQADAMLDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQD-MVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + +++ RL S+ +S + +Q+ V L ++G A +L ++ Sbjct: 63 RATGAMLNSRLQHSERVMSGIVDQLQNEAVKHLGFAMDGSRSPEDLSAYAQVLASVRDTL 122 Query: 125 VTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + AN D G YLFSG + P+ ++ +F+ L E +++ Sbjct: 123 LQSANTRDSSGNYLFSGTAITTAPIRFDPAAPVGSRYTFEGNL-----EKQTAVVGDGVT 177 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 EV++ + +M D + L++ + + +AN N Sbjct: 178 EVANESLAEMADGLNALDEAIAKMS------------------------EPNANPNDPAY 213 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 RD + + T++ L+ + + +G ++ + Sbjct: 214 RD-----------------------VLGRATDTIESVLASVNAKIGRMGSTQARLQMLDE 250 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + + + + + ++ S + ++ +L++LN L Sbjct: 251 LHESAQIVGNQAALDVGKISPEEVFTDYQSYMVALQASQKLYAEVTQLTLLNVL 304 >gi|332994155|gb|AEF04210.1| flagellar hook-associated protein FlgL [Alteromonas sp. SN2] Length = 407 Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 64/408 (15%), Positives = 131/408 (32%), Gaps = 59/408 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ISTS ++++ E + VK E++ TG+ +L +E + + + Sbjct: 3 ISTSQVYDQSIRSIMENQEGLVKTQEQLATGKRIITPADDPVGAAKVLRLTEELDGLTQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 +N LVT L +A L+++ + +V G D+ L Sbjct: 63 QRNNDLVTGSLEQQEAVLTNITNSINRARTLVVQAGSGILDDPDKRAIGAELEQIKLEIF 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLE------------- 171 N D +G Y+++G S+ + A F++ Sbjct: 123 DLMNTQDADGNYMYAGYQSANQAFTYNPASSGNAITFSGDAGVSFIQLSSSSKIQSTSNG 182 Query: 172 -ENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRI---- 226 E +++L+ V+ + + + + + F D ++ N+ + N Y++ Sbjct: 183 YEVFENVLSRFDFSVTGSTVADLQNTVVKEQGTF--DTFFNKNYDPVTSANNDYQVEFLA 240 Query: 227 -KDTEGIDVSANV-------------NMRGIRDIMFVAV--------------------- 251 + + + ++G++ AV Sbjct: 241 SGEAQLTNTGTGAVVGTVGYTSGSPFTIKGMQFEASAAVGDTINFSLDAPEKKSMAQSLH 300 Query: 252 -IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 I T + + D A L + GL I +RA +G S NI E Sbjct: 301 EIQTILMDSTIDDSALQEAIADSLVGLDNGLEKISLERASIG-SRLNIAESTYESNLDME 359 Query: 311 I-IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I S V+ A + + + + ++ LS+ N++ Sbjct: 360 IAAKASRSSIQDVDYAEASTEFAKQETALNAALATFPQVSNLSLFNFI 407 >gi|222529659|ref|YP_002573541.1| flagellar hook-associated protein FlgL [Caldicellulosiruptor bescii DSM 6725] gi|222456506|gb|ACM60768.1| flagellar hook-associated protein 3 [Caldicellulosiruptor bescii DSM 6725] Length = 315 Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 109/352 (30%), Gaps = 41/352 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + I + + +M TG+ Y L + + I + Sbjct: 3 ITNNMMVNNFLINLNKNLSRLDDIQYKMATGKKIRYPSDNPVITARSLRLRTDVSEIEQL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++ L+ + + +Q + V G A + + + Sbjct: 63 QKNVDDAISWVDTTESALADINESLQRVRELAVRGANGTNTKEDMAQIAKEVAQIKQHII 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N G+Y+FSG + P+N + D L G+++ Sbjct: 123 QVGNTNYAGRYIFSGFKTDTAPINSDGSFS-------DTNSFDSTGGYPIDLSTGKNIIQ 175 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + I ++ ++ + + + I E DV +VN Sbjct: 176 FELMKANYIS-INKIANQVFYIQGETDENKGNLFKVLDNLINALESGDV-TSVNS----- 228 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 +LS + + + ++ QR +G + + + L Sbjct: 229 ---------------------------LLSDIDRHIDNVVAQRGDVGALQNRLELIKNRL 261 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + N T +S + V+ QL T N + ++ ++L++L Sbjct: 262 SDDNVNFTTLLSNNEDVDMAEIIMQLKTAENVYRAALQTGAQILPPTLLDFL 313 >gi|312127298|ref|YP_003992172.1| flagellar hook-associated protein 3 [Caldicellulosiruptor hydrothermalis 108] gi|311777317|gb|ADQ06803.1| flagellar hook-associated protein 3 [Caldicellulosiruptor hydrothermalis 108] Length = 315 Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 107/352 (30%), Gaps = 41/352 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + I + + +M TG+ Y L + + I + Sbjct: 3 ITNNMMINNFLINLNKNLSRLDDIQYKMATGKKIRYPSDDPVITARSLRLRTDVSEIEQL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + T ++T+++ L+ + + +Q + V G A + + + Sbjct: 63 QKNVDDATSWVNTTESALADINESLQRVRELAVRGANGTNTKEDMAQIAKEVAQIKQHII 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N G+Y+FSG + P+N + D L G+++ Sbjct: 123 QVGNTNYAGRYIFSGFKTDTAPINSDGSFS-------DTGDFTSTGGYPVDLSTGKNIIQ 175 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + I + ++ + + + I + D S Sbjct: 176 FELMKANYI-GINKTANQVFYIQGETDENKGNLFKVLDNLINALQNGDGST--------- 225 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 +L+ + + + ++ QR +G + + + L Sbjct: 226 ------------------------VNSLLADIDRHIDNVVAQRGDIGALQNRLELIKNRL 261 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + N T +S + V+ QL T N + ++ ++L++L Sbjct: 262 SDDNVNFTTLLSNNEDVDMAEIIMQLKTAENVYRAALQTGAQVLPPTLLDFL 313 >gi|254255093|ref|ZP_04948410.1| Flagellin [Burkholderia dolosa AUO158] gi|124899738|gb|EAY71581.1| Flagellin [Burkholderia dolosa AUO158] Length = 353 Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 118/356 (33%), Gaps = 54/356 (15%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T IS+ + M + + +L +++ +GQ +++ E++ + Sbjct: 48 MTMRISSRHFGDTMLWTLHASSGKAAQLMQKIGSGQRIQRPSDDPVGTVRLMQLERDASR 107 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 +A+ + ++ RL ++AHL M + V L+ +G AG LR Sbjct: 108 VAQYQKNIDTLSVRLMQNEAHLDGMLQSVMSARDVLLAATDGSASAGDLNAMAGPLRSLT 167 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 ++ AN D G YLF+G + P+ F + A + + + Sbjct: 168 DALAQAANAKDGNGHYLFAGTLTDTPPIE--FDATAPAGSRYRFAGNTGQQYVAVGDGVT 225 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 Q V+ N +++ + + + +D +D S Sbjct: 226 QAANVAVENLERVLNGLDLAVEALADPA-----------------------VDGSVPA-- 260 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 R VL + G+ + + A LG + + Sbjct: 261 ------------------------TRAVLADALDVLDVDGIDALSGKIAALGGAHNTLAL 296 Query: 301 ERVFLQNKNNIIDTYISKSIG-VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + + S +G ++ A +L+ ++ +Y K+++LS+ + Sbjct: 297 LSEN-HAAMRVANGQASTLVGELDFAEAIEELNRYTMAVQGTYHAYGKIRQLSLFD 351 >gi|254443148|ref|ZP_05056624.1| flagellar hook-associated protein 3 [Verrucomicrobiae bacterium DG1235] gi|198257456|gb|EDY81764.1| flagellar hook-associated protein 3 [Verrucomicrobiae bacterium DG1235] Length = 303 Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 120/356 (33%), Gaps = 59/356 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ ++ + + + + KD L+E++ TGQ + A IL+ ++EK+ I + Sbjct: 3 VTNNTFPDTLLSHLQRVTKDMNMLNEQVATGQRISKVSEDSASANRILDMQEEKHRITQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + +T+ + L + +I VG L L +G + A + + + + Sbjct: 63 SKNAARAQNINNTTISQLQNFIQISDR-VGELATLADGLKGADGMRAYAEEVDELIKHAM 121 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKD----SLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN G+Y+F G++S +P D + + E S Sbjct: 122 QSANAKFNGEYIFGGVDSGTEPFVANTDADGKIIAAPGGAVTYEGAATGPEFHLSETGKI 181 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 QQ+ DFI ++ + + ++ + Sbjct: 182 KPFTDGATNQQLGDFINRMVE-------------------------LRDALETGDSA--- 213 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 +T M + +++ +I + G + I + Sbjct: 214 --------------------------AVTSTMRTDLEESEDEMIFALSRQGSVQMRIEFD 247 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + ++ IS V+ +L+ + N + S ++ S+L+Y+ Sbjct: 248 LSLNKQRFTDLEENISAEADVDIAQTVVRLTQVQNAYQASLKSAGQVLNQSLLDYI 303 >gi|83647166|ref|YP_435601.1| flagellar hook-associated protein FlgL [Hahella chejuensis KCTC 2396] gi|83635209|gb|ABC31176.1| Flagellin and related hook-associated protein [Hahella chejuensis KCTC 2396] Length = 412 Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 63/416 (15%), Positives = 137/416 (32%), Gaps = 70/416 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IST +F R ++ K ++ +G+ +D + T IL+ QE + Sbjct: 3 ISTQQLFNRGLDNILDVTSQLQKTQLQISSGRRVLTPADDPVA----STRILQINQELSL 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + +L RLS L + +++Q + V +G + + A ++ Sbjct: 59 IDQYKSNINLAENRLSLEDGLLDGVGEVIQRLRELTVQAGDGSQNADDKKFIAAEVQQRL 118 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL-----------------------NGYFTKDSL 157 V N D G+Y+F+G ++P N Sbjct: 119 SQLVGMLNTKDPSGEYIFAGFQGKQEPFQLNAAGAYRYVGDEGRRFMQIDANVSVAAGDN 178 Query: 158 AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTD------FIKQLEDKFSDDEYWA 211 K+ F + +++ + + QM D F + +DE Sbjct: 179 GKEVFVNIKSANNTFYTQASPRNTAEPPAIITQGQMIDQELYDAFYPEDMVVVFNDE--T 236 Query: 212 NNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM----------------------FV 249 + A +++I R ++ + I+ Sbjct: 237 DVVPPAPNYSIVQRSDGKPVLNNQRYATGQPIQVQGVQFEIIGSPQPGDTFFVQSSEKQG 296 Query: 250 AVIGTEFLSKNLTD-----GARNVLT---KKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 + E L++ L D R LT L+ + ++E R+ LG I++ Sbjct: 297 LLTTVERLAEGLEDYQDTPAGRQTLTDLLDSTLANFTNAETKLLETRSRLGARLNTIDDT 356 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ + +S+ ++ A + L+ ++ + +++ LS+ + L Sbjct: 357 KQLHEDVEVLTKEVLSELQDLDYAEAVSNLTLQNFVLQAAQQSYSRVTSLSLFDLL 412 >gi|317047698|ref|YP_004115346.1| flagellar hook-associated protein 3 [Pantoea sp. At-9b] gi|316949315|gb|ADU68790.1| flagellar hook-associated protein 3 [Pantoea sp. At-9b] Length = 320 Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 119/349 (34%), Gaps = 37/349 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ IF + + +K+ E++ +G+ + + Q + A+ Sbjct: 3 LSTNMIFNQQVRGITDSQASWLKVGEQLSSGRRVTNPSDDPIAASRAVVLSQTQAKSAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + LS + LSS+ +QD +V G ++ A L + Sbjct: 63 ATARSFANQSLSMEENTLSSVTSSIQDAQTLIVQGSTGTLSDDDRASIATSLEGIRSQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN D G Y+F+G + +P T + S Sbjct: 123 GLANSKDGNGNYIFAGYQTDTEPFTDDGTGVTYVGGS----------------------- 159 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 +T + D + S S+ + +E N+ + Sbjct: 160 ------NPITQKVDDSRTMSVGDTGTSVFMSITSNAKAEPDGSASET-------NLFNML 206 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 D A+ + + + T K + L+ ++ R+ +G ++ Sbjct: 207 DSAIAALKVPQDNADDATKQTFQDAMDKTNRGLSNSLNNVLSVRSAVGSKMSELDTLDAQ 266 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 +++ I+ + +S + V+ +A + + ++ SY + T++ K+S+ Sbjct: 267 GDDRDTIMASQMSDLVDVDYTSAISSYTMQQTALQASYTVFTQMSKMSL 315 >gi|88813661|ref|ZP_01128890.1| Flagellin-like protein [Nitrococcus mobilis Nb-231] gi|88789079|gb|EAR20217.1| Flagellin-like protein [Nitrococcus mobilis Nb-231] Length = 400 Score = 70.1 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 53/398 (13%), Positives = 110/398 (27%), Gaps = 46/398 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ I + + K+ +++ +G+ + L I Sbjct: 3 ISTNQIQQLGLNALLDQQSRLTKVQQQIASGRRILTPADDPSGAARSLILAHSIGAIESY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 S + R+ + L Q ++Q + V + +R ++ V Sbjct: 63 SRSADQIKPRMQLEDSTLEQTQNLIQRLRELAVQANNATQTADNRHQIGAEVRQTFIQLV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL--------------NGYFTKDSLAKKSFDQMLQGFL 170 AN TD G+YLF+G+ S +P S + + Sbjct: 123 QLANSTDGNGEYLFAGLQSRTQPFLRAGNTVTYQGDQGQRLAQTGSHQQLATTHSGYDVF 182 Query: 171 EENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 + S + + + +A + + Y + Sbjct: 183 MKIRTGDGQFTAEAASINTGSGIISPVTVTDPGALTGSSYAVTFDINGAGALTYTLSKDG 242 Query: 231 G------IDVSANVNMRG-------------------------IRDIMFVAVIGTEFLSK 259 D S + G + A Sbjct: 243 TPTATQPYDSSTPIRFDGLSVTLDGTPAKGDQFTIQPSGFGSLFDTVDRFATALETAQDG 302 Query: 260 NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKS 319 A + + L + Q L I+ RA +G ++ + + T S Sbjct: 303 PTGRTAYQNVGNQTLQGLDQALDHILTIRAEVGSRLNALDSSQEANEAALLNFQTTKSAL 362 Query: 320 IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A +LS + ++ + ++Q+LS+ N+L Sbjct: 363 DDLDYAKAITELSQRLLGLQAAQKSYAQIQELSLFNFL 400 >gi|77918752|ref|YP_356567.1| flagellar hook-filament junction protein [Pelobacter carbinolicus DSM 2380] gi|77544835|gb|ABA88397.1| flagellar hook-filament junction protein [Pelobacter carbinolicus DSM 2380] Length = 296 Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 107/357 (29%), Gaps = 61/357 (17%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MKTT +T + + E +G + + V ++ + + Sbjct: 1 MKTTLTATY---RTLQSQISRSTAKMQQYQETAASGIKLNTSSDDPSAVAPVINAQSQIR 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + T L + L ++ ++ ++ G + + + Sbjct: 58 SGERFQSTVVAATNYLDNQDSTLDQLENLMVQAKELVLAAGNGSLGDGEIAAYGQQMTSL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 E AN EG+YLF+G + +P LQ + Sbjct: 118 REEAFALANTQVEGKYLFAGFKTDTQPFPDPMDPTDYQGDGNHTELQ----------IGP 167 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 V+++ + Sbjct: 168 GQKVVTNLTGAE-----------LFGGS-------------------------------D 185 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 G+ + ++ + + + LT+ L ++ G + R+ +G + + E Sbjct: 186 GGLNILALLSDLEQNLGAL----DTQQALTR--LDDLETGADQVRGYRSKMGTTAVRVEE 239 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V +Q + ++ +S + A++ L+ ++ + +T K+ +LSIL+YL Sbjct: 240 AGVRMQEFTDSMEVKLSGYRDADIIEAYSDLAQQEQALQAALSVTAKISQLSILDYL 296 >gi|167725937|ref|ZP_02409173.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei DM98] Length = 304 Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 117/354 (33%), Gaps = 54/354 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+++ M + ++ + M T + + Q + + Sbjct: 3 ITSNQYHSIMAQVNRQATAGLMDTQIRMATEKRILRPSDDPTGAVRLAMLVQADAMLDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQD-MVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + +++ RL S+ +S + +Q+ V L ++G A +L ++ Sbjct: 63 RATGAMLNSRLQHSERVMSGIVDQLQNEAVKHLGFAMDGSRSPEDLSAYAQVLASVRDTL 122 Query: 125 VTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + AN D G YLFSG + P+ ++ +F+ L E +++ Sbjct: 123 LQSANTRDSSGNYLFSGTAITTAPIRFDPAAPVGSRYTFEGNL-----EKQTAVVGDGVT 177 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 EV++ + +M D + L++ + + +AN N Sbjct: 178 EVANESLAEMADGLNALDEAIAKMS------------------------EPNANPNDPAY 213 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 RD + + T++ L+ + + +G ++ + Sbjct: 214 RD-----------------------VLGRATDTIESVLASVNAKIGRMGSTQARLQMLDE 250 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + + + + + ++ S + ++ +L++LN L Sbjct: 251 LHESAQIVGNQAALDVGKISPEEVFTDYQSYMVALQASQKLYAEVTQLTLLNVL 304 >gi|288960284|ref|YP_003450624.1| hypothetical protein AZL_a05490 [Azospirillum sp. B510] gi|288912592|dbj|BAI74080.1| hypothetical protein AZL_a05490 [Azospirillum sp. B510] Length = 682 Score = 69.7 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 87/259 (33%), Gaps = 11/259 (4%) Query: 103 GKTDNNKFPINAGMLRDSYESFVTFAN----MTDEGQYLFSGINSSEKPLNGYFTKDSLA 158 TD N G + D N +T GI + + Sbjct: 430 SDTDYAAGVTNVGQVADKLRQTFGTLNPAPPVTINAAGSGPGIALTSTANADPNHPNRST 489 Query: 159 KKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNAS 218 S + +N+ S+ + S +N+ + + F D EY + + Sbjct: 490 LFSTSAKVTNGSLQNTMSVATLPPQQDSQVNSP----YTDPPDLPFYDAEYLTKGKNADA 545 Query: 219 DHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQ 278 + I D + + + +G + ++ + + G + K + Sbjct: 546 YRKSQVTIDDNLNLTYGVSADEKGFQSLVKAMQMVR---TAASNPGKWTEYSTKARELLT 602 Query: 279 QGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKI 338 Q I A + ++ + + + ++K G+++ A+LS+ +N Sbjct: 603 QATDQIRSIHAKVASDSATLDNTKSAHTDSIATLTDRVAKIEGIDETEVAARLSSAMNIQ 662 Query: 339 EMSYMITTKLQKLSILNYL 357 + +Y + + QKLS+LNYL Sbjct: 663 QATYTVAGQTQKLSLLNYL 681 >gi|254299679|ref|ZP_04967128.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 406e] gi|157809563|gb|EDO86733.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 406e] Length = 304 Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 117/354 (33%), Gaps = 54/354 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+++ M + ++ + M T + + Q + + Sbjct: 3 ITSNQYHSIMAQVNRQATAGLMDTQIRMATEKRILRPSDDPTGAVRLAMLVQADAILDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQD-MVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + +++ RL S+ +S + +Q+ V L ++G A +L ++ Sbjct: 63 RATGAMLNSRLQHSERVMSGIVDQLQNEAVKHLGFAMDGSRSPEDLSAYAQVLASVRDTL 122 Query: 125 VTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + AN D G YLFSG + P+ ++ +F+ L E +++ Sbjct: 123 LQSANTRDSSGNYLFSGTAITTAPIRFDPAAPVGSRYTFEGNL-----EKQTAVVGDGVT 177 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 EV++ + +M D + L++ + + +AN N Sbjct: 178 EVANESLAEMADGLNALDEAIAKMS------------------------EPNANPNDPAY 213 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 RD + + T++ L+ + + +G ++ + Sbjct: 214 RD-----------------------VLGRATDTIESVLASVNAKIGRMGSTQARLQMLDE 250 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + + + + + ++ S + ++ +L++LN L Sbjct: 251 LHESAQIVGNQAALDVGKISPEEVFTDYQSYMVALQASQKLYAEVTQLTLLNVL 304 >gi|167628880|ref|YP_001679379.1| flagellar hook-associated protein 3, putative [Heliobacterium modesticaldum Ice1] gi|167591620|gb|ABZ83368.1| flagellar hook-associated protein 3, putative [Heliobacterium modesticaldum Ice1] Length = 309 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 104/332 (31%), Gaps = 46/332 (13%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 K ++ TG+ I+ + + + + S + L S + LS Sbjct: 23 MDKTQFQLSTGRQYRLPEDAPMENVQIMTHRSTLVQVNKYMKNTSEIQTWLENSDSALSE 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 + ++Q + ++ G T A + + + +N T G+Y+F+G N+ Sbjct: 83 VNNVLQRVRELILQADNGTTTTEAKKATADEISELNDHLKNVSNTTIAGRYIFAGTNTDR 142 Query: 146 KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFS 205 P AK + G+ + N + ++ ++ A M + + Sbjct: 143 PP---------CAKDT-----NGYWKWNGNNGDINVEIDAKAVVA--MNSKGTNVFVR-- 184 Query: 206 DDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGA 265 +D W + + + + + + Sbjct: 185 NDFNWPG---------------------SPVPEPEKNLFNFLDSLTKTLKDANTTEDLDT 223 Query: 266 RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 +T K L G+ E+RA +G I+ + L+ I +S + Sbjct: 224 YLAITDKFLD-------GVNEERASVGARANRIDFTKSRLEEFQLHITEALSDREDADMA 276 Query: 326 TAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + N + ++ + S++++L Sbjct: 277 QVYTNMRMQENVFRAALSAGARIIQPSLVDFL 308 >gi|32267194|ref|NP_861226.1| flagellar hook-associated protein FlgL [Helicobacter hepaticus ATCC 51449] gi|32263247|gb|AAP78292.1| flagellar hook-associated protein FlgL [Helicobacter hepaticus ATCC 51449] Length = 855 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 74/194 (38%), Gaps = 18/194 (9%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T + +MN + + ++ ++ +G YG Q + L+ E EK Sbjct: 1 MRVTFGTKY---NQMNYYQGTMQSKLMDMNTKIASGLKIQYGYQDSSVFNQNLKLEYEKI 57 Query: 61 HIAERLH-SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 ++ + + N T L+ + LS + + + L+ A L Sbjct: 58 NLDQGIDVGNDAYTSTLN-TDKALSELSQTAEQFNTKLIQAANDIHSPTSREAIARDLEK 116 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 E + AN + G++LF+G N +P F D K + + + ++L++ Sbjct: 117 LKEHMINIANTSIGGEFLFAGSNVKIRP----FDPDGTYKGNNETL---------EALVS 163 Query: 180 GQHLEVSSMNAQQM 193 + ++ +++ Sbjct: 164 NNNPIPYNITGEEL 177 Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 74/234 (31%), Gaps = 29/234 (12%) Query: 142 NSSEKPLNGY---FTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 N S +P+ Y T++ L ++ + L++ ++ + + +M + Sbjct: 633 NYSNQPMEHYLALQTQNGLPTQAGKSAYEALLKQTKGNVSVYLSYDGRIEISDEMRSVSR 692 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM---------------RGI 243 NAS + + ++ N N GI Sbjct: 693 MKF-----------MMYNASSSDFSEQSIHNHRASLTFNANNALVIDQPDVDFFRSLDGI 741 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + + V + + T RN + + I + A+ G ++ Sbjct: 742 IEAVRAGVYRPDAYGEEYTSEMRNKGIQNGIELFGHLSDHIEKMIALNGAHSRSFENTIR 801 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + I++ S IG + + S L T+++ ++S++NYL Sbjct: 802 RNEVLRVQIESIKSDVIGTDIAQTYNHFSNLTTNYNAVLASTSRINQMSLVNYL 855 >gi|304397211|ref|ZP_07379090.1| flagellar hook-associated protein 3 [Pantoea sp. aB] gi|304355360|gb|EFM19728.1| flagellar hook-associated protein 3 [Pantoea sp. aB] Length = 321 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 107/349 (30%), Gaps = 36/349 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ IFE+ + +K+ E++ +G+ + + Q + + Sbjct: 3 ISTNMIFEQQVRGITDSQASWLKVGEQLSSGRRVTNPSDDPIAASRAVVLTQTQQQGKQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + LS L + + G +V G ++ A L + Sbjct: 63 ALARTFAEQGLSLEDNTLKGVTNGIIAAQGLIVNGSTGTLSDDDRGSIATQLEGIRAQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN D G+Y+F+G + P + + Q + ++ Sbjct: 123 NQANSKDANGRYIFAGYKTDSAPFVDTAGTGVSYTGGNEAITQKVDTSRTMTVAHTGDSI 182 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 S+ E ++ N+ + Sbjct: 183 FMSITGN-----------------------------------ATKEPDGSASETNVFTML 207 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 D A+ + + T K + L+ + + + +G I+ Sbjct: 208 DSAIAALKVPQDNADAATKQTFQDAMDKTNRGLGNALNNVSKVVSEIGTQLGEIDTLNAQ 267 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 +++ I ++ +S + V+ A + + ++ SY T + K+S+ Sbjct: 268 GDDRSVIYNSQMSDLVNVDLTEAASSYTMQQTALQASYKTFTDMSKMSL 316 >gi|126444065|ref|YP_001061253.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei 668] gi|126223556|gb|ABN87061.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 668] Length = 304 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 117/354 (33%), Gaps = 54/354 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+++ M + ++ + M T + + Q + + Sbjct: 3 ITSNQYHSIMAQVNRQATAGLMDTQIRMATEKRILRPSDDPTGAMRLAMLVQADAMLDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQD-MVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + +++ RL S+ +S + +Q+ V L ++G A +L ++ Sbjct: 63 RATGAMLNSRLQHSERVMSGVVDQLQNEAVKHLGFAMDGSRSPEDLSAYAQVLASVRDTL 122 Query: 125 VTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + AN D G YLFSG + P+ ++ +F+ L E +++ Sbjct: 123 LQSANTRDSSGNYLFSGTAITTAPIRFDPAAPVGSRYTFEGNL-----EKQTAVVGDGVT 177 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 EV++ + +M D + L++ + + +AN N Sbjct: 178 EVANESLAEMADGLNALDEAIAKMS------------------------EPNANPNDPAY 213 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 RD + + T++ L+ + + +G ++ + Sbjct: 214 RD-----------------------VLGRATDTIESVLASVNAKIGRMGSTQARLQMLDE 250 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + + + + + ++ S + ++ +L++LN L Sbjct: 251 LHESAQIVGNQAALDVGKISPEEVFTDYQSYMVALQASQKLYAEVTQLTLLNVL 304 >gi|302874577|ref|YP_003843210.1| flagellar hook-associated protein 3 [Clostridium cellulovorans 743B] gi|307690812|ref|ZP_07633258.1| flagellar hook-associated protein 3 [Clostridium cellulovorans 743B] gi|302577434|gb|ADL51446.1| flagellar hook-associated protein 3 [Clostridium cellulovorans 743B] Length = 321 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 41/352 (11%), Positives = 113/352 (32%), Gaps = 33/352 (9%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + + K+ ++ TG+ +V ++ + + + + Sbjct: 3 ITNKMMSNKYLFNLNNNLNNMTKVQNQLSTGKQFSKPSDNPLKVAKSMQIDSDISSNEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + T L L+++ ++ LV +++ L + F Sbjct: 63 KANIQGTTNYLDVVDTTLATLNDVLVSFEEKLVSAGNAAYGSDERNAINQELNEKVAHFA 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N + +G Y+F G ++KP+ + A Sbjct: 123 QALNTSFQGTYVFGGTRGTDKPVKTVVDAN----------------GQYTIQYANSDGTD 166 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + + A +MT + + + S ++Y E ++ + + Sbjct: 167 NPITATEMTQVSSKYKVEVSQGV------------TMEYNTTAPEILNFNGGTTNNVMDL 214 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 + ++ LT + L+ +Q + I++ R+ +G + ++ Sbjct: 215 FKNILNNLNSSDPADINK-----LTTENLTDIQAAHNNILKARSTVGAMQNRMDSALSKN 269 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +++ + +S + V+ Q + L + K+ + ++L+YL Sbjct: 270 KDETLNLKEILSSNEDVDVAETTMQYAMLQTTYIAALQTGAKVIQPTLLDYL 321 >gi|299536008|ref|ZP_07049327.1| flagellar hook-associated protein 3 [Lysinibacillus fusiformis ZC1] gi|298728613|gb|EFI69169.1| flagellar hook-associated protein 3 [Lysinibacillus fusiformis ZC1] Length = 331 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 36/337 (10%), Positives = 110/337 (32%), Gaps = 34/337 (10%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 KL +++ +G+ + + ++ + + + + V + T+ L+ Sbjct: 23 MSKLQDQLNSGKKITRPSDDPVIAVKGMGYRRDLGRVEQYTRNMNEVNNWIDTTDESLNQ 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 + + ++ + ++ ++ + + +N +Y+FSG N+ + Sbjct: 83 VGEQMKRVRELVIQAANDTNTPDERAKIKKEIDQIRQQIQDVSNTKIGDRYIFSGTNTDK 142 Query: 146 KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFI----KQLE 201 ++ K + Q + N S A + ++ ++ D I Sbjct: 143 PLFVDANPPNADGSKIINADYQLYDGTNIISTAADKLTAPNADVQIEVYDGIQLQVNAPG 202 Query: 202 DKFSDD-EYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKN 260 + + SN D +E I + F S + Sbjct: 203 ADLFGNIDSLMGKISNLLDPERVPGPATSEEISKA-----------------LGGFTSNS 245 Query: 261 LTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 +D + + I+E +A +G + + L + + +S + Sbjct: 246 KSDD------------ITNIHNKILETQADMGARQNRVELMENRLSLREISVTKQLSNNE 293 Query: 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V+ A ++ T + + + + ++ + ++++++ Sbjct: 294 DVDYSKAITEMVTSESIHQAALSVGARIIQQTLVDFI 330 >gi|119469957|ref|ZP_01612762.1| putative flagellar synthesis; flagellar regulon; hook-associated protein [Alteromonadales bacterium TW-7] gi|119446667|gb|EAW27940.1| putative flagellar synthesis; flagellar regulon; hook-associated protein [Alteromonadales bacterium TW-7] Length = 410 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 58/412 (14%), Positives = 135/412 (32%), Gaps = 64/412 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +S + +++ ++ K E++ T + A + L++ + Sbjct: 3 LSNNLMYQSSLNSILNNQQNVSKAQEQVNTQKRVLTASDDPAAASRALQYTDRIQSNEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + +++ RL+ + L +++ ++ + G A ++ + + Sbjct: 63 SKNITMLNSRLNIEEGALENIKSALERAHTLTIQSGNGVYSAADREGLAEEIKALQSTVL 122 Query: 126 TFANM-TDEGQYLFSGI--NSSEKPLNGYFT---------------KDSLAKKSFDQMLQ 167 N T++G+Y+FSG N+ L+ + + KS D Sbjct: 123 DLMNSKTEDGKYIFSGYQDNTQTYSLDSSTGLYVYGGDQGQHMIKIAEGVDIKSSDNGFD 182 Query: 168 GFLEENSKSLLAGQHLEVSS-MNAQ--------QMTDFIK---QLEDKFSDDEYWANNWS 215 F + +++ + VS + + Q F K + + N + Sbjct: 183 AFEKVDARLDVVSNDGVVSGGITSSKVYVTEQGQFDTFHKQNYNPDPSAAAGANTLNVIT 242 Query: 216 NASDHNIKYRIKDTEGIDVSANVNMRGIRDIMF--------------------------- 248 A N Y+I+ I + N+N I+ Sbjct: 243 TAGSPN-TYQIEQAGTILATGNINDSVIKFAGMEISVTPVATGQIDITLEAPKKENVLNS 301 Query: 249 VAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNK 308 ++ + + LT+ + L + + + +A LG IN LQ+ Sbjct: 302 MSELIAGLTNPALTEEEFEQVIADSLVQISNAKNNVSLTQAGLG---GRINTAEKVLQSN 358 Query: 309 NNI-IDTYI--SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ I+ S + ++ A +L+ ++ S +L LS+ +YL Sbjct: 359 TDLDINNKSARSDLVDIDITEAITELTKQETALQASQATFGRLANLSLFDYL 410 >gi|167623368|ref|YP_001673662.1| flagellar hook-associated protein FlgL [Shewanella halifaxensis HAW-EB4] gi|167353390|gb|ABZ76003.1| flagellar hook-associated protein 3 [Shewanella halifaxensis HAW-EB4] Length = 396 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 63/396 (15%), Positives = 141/396 (35%), Gaps = 46/396 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +F + + + ++ E++ TG+ + I Q+ + + + Sbjct: 3 ISTAQMFHQNINSVTQKQSQTSQIIEQLSTGKRVNTAGDDPVAAAGINNLNQKNSVVDQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 L + RLS S++ L S + + ++ + G ++ A +R S E + Sbjct: 63 LKNIDYAKNRLSISESKLGSAATLASSVREQVLRAVNGSLTDSDRQTVADEMRGSLEELM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN D G YLF G N+ +P F A D ++ + + ++ A + Sbjct: 123 AIANSKDESGNYLFGGFNTGSQPFE--FDASGNAVYHGDSGVRESVVASGTTIGANIPGD 180 Query: 185 VSSMNAQQ-----MTDFIKQLEDKFSDDEY-WANNWSNASDHNIKYRIKDTEGIDVSANV 238 ++ MNA +++ +F+ + + ++ D + + + S N Sbjct: 181 LAFMNAANGLGDYSVNYLATQTGEFNVESAKVTDPATHVPDTYTFNMVGNDLEVRDSTNA 240 Query: 239 --------------------------NMRGIRDIMFVAVIGTEFLSKN-----------L 261 G M A + + N + Sbjct: 241 VVTTVTAFDPNTPVSFNGIEVKLDGKPAPGDSFTMEHAPEVSLLDTINSAIALIEDPNKV 300 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 A +ML+ + G++ + R V G S K+++ + + + ++ +S Sbjct: 301 NTPAGKSELAQMLNNIDSGMNQLDLARGVAGNSLKSLDSYAATHEEEQIVNNSALSMLED 360 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A QL + + + TK+ +S+ +Y+ Sbjct: 361 LDYAEAITQLEQQQQALNAASSVFTKVGTVSLFDYI 396 >gi|187934470|ref|YP_001885010.1| flagellar hook-associated protein 3 [Clostridium botulinum B str. Eklund 17B] gi|187722623|gb|ACD23844.1| flagellar hook-associated protein 3 [Clostridium botulinum B str. Eklund 17B] Length = 402 Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 55/400 (13%), Positives = 130/400 (32%), Gaps = 48/400 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+TS + + KLH ++ +G+ +V+ ++ E + Sbjct: 3 ITTSMLASNYQSNMTKNLNHMQKLHNQLSSGKEISRPSDNPYKVSRTMQMYMEIGANKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++ L T+ L+ M+ + + LV G ++ +++ Sbjct: 63 NENIKDISNWLDTTDTSLNQMENVFARVRELLVSAGSGAYGPDEKKAIQDEIKERVNEMG 122 Query: 126 TFANMTDEGQYLFSGINSSEKPL------NGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 N +G Y+F G S+ KP+ + S N + Sbjct: 123 QILNTNFDGVYIFGGTKSTSKPVIINSNGELCYADKDGNAVSKTATGVKIDLTNPITDGG 182 Query: 180 GQHLEVSSMNAQQMTDFIKQ-------------------------LEDKFSDDEYWANNW 214 + ++ + + I E+ E + Sbjct: 183 TKSIKGMEKDGNNIKMIITDTNTTPPSETPIAIDLSAIGSGTPPETEESLFKKELKGQGF 242 Query: 215 SNASDHNIK---------YRIKDTEGIDVS----ANVNMRGIRDIMFVAVIGTEFLSKNL 261 +++ + +I ++VS N N + + L+K + Sbjct: 243 TDSDIGRLTGMVPSFDALDQISSELNVEVSQGVLINYNKNAVDLLEGNGTNIMSTLNKII 302 Query: 262 TD----GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 T+ G ++V+T + L V + +++ RA +G + + + +++N + +S Sbjct: 303 TNLDEGGDKSVITGECLGEVDDIIKNLLQHRAEVGAMQNRMESAQDKNESENLDMTDILS 362 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 K+ ++ Q S + + K+ +IL+YL Sbjct: 363 KTEDIDFTEKTIQYSIMQTVYMAALQTGAKILPATILDYL 402 >gi|296330252|ref|ZP_06872733.1| flagellar hook-associated protein FlgL [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676143|ref|YP_003867815.1| flagellar hook-filament junction [Bacillus subtilis subsp. spizizenii str. W23] gi|296152520|gb|EFG93388.1| flagellar hook-associated protein FlgL [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414387|gb|ADM39506.1| flagellar hook-filament junction [Bacillus subtilis subsp. spizizenii str. W23] Length = 298 Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 40/346 (11%), Positives = 102/346 (29%), Gaps = 58/346 (16%) Query: 12 FERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSL 71 + + +K KL ++ +G+ L++ + + + + + S Sbjct: 10 QNSLRYIGSSYSK-LDKLQSQISSGKKISKASDDPVVAMKSLKYNNQLSQVQQYQSNASQ 68 Query: 72 VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT 131 L ++ +++ I+ + V + ++ E + AN Sbjct: 69 AFTWLENTETNITEGIDILSKVRELAVQAQSDTNGEAERQAIGVEVKQLKEQLLNIANTQ 128 Query: 132 DEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQ 191 G+Y+F+G NS + P+ G S A Sbjct: 129 VNGRYIFNGTNSDKPPVTD----------------------------NGDGTYTISDTAD 160 Query: 192 QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAV 251 + + + K + D A ++ S N+ + E S +++ Sbjct: 161 VVVNISNNMTLKVNSDPKSAFGGTSESGQNVFEMLDSFEKALSSGSIDG----------- 209 Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 +L + Q G+ +R+ LG + L + Sbjct: 210 ------------------MDSVLDDIDQFSGGMSAERSDLGARYNRLELVNTRLSAQEET 251 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S + VE + + + + ++ + +++++L Sbjct: 252 ATKVLSDNEDVELEEIITEFIAQQSVHRATLAVNAQIVQPTLIDFL 297 >gi|188590093|ref|YP_001920170.1| flagellar hook-associated protein 3 [Clostridium botulinum E3 str. Alaska E43] gi|251778367|ref|ZP_04821287.1| flagellar hook-associated protein 3 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188500374|gb|ACD53510.1| flagellar hook-associated protein 3 [Clostridium botulinum E3 str. Alaska E43] gi|243082682|gb|EES48572.1| flagellar hook-associated protein 3 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 402 Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 57/407 (14%), Positives = 125/407 (30%), Gaps = 62/407 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+TS + KL ++ +G+ +V+ ++ E + Sbjct: 3 ITTSMLSSNYKSNMTTNLNHIQKLQNQLSSGKEISRPSDNPYKVSRTMQMYTEIGANKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++ L T+ L+ M+ + + LV G ++ +++ Sbjct: 63 NENIKDISNWLDTTDTSLNQMENVFARVRELLVTAGNGAYGPDEKKAIQDEIKERVNEMG 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNG-------YFTKDSLAKKSFDQMLQGFLEENSKSLL 178 N +G Y+F G S+ KP+ Y KD A S N + Sbjct: 123 QILNTNFDGVYIFGGTKSTSKPIMVNSNGELCYADKDGNA-VSKTATGVKIDLTNPITDG 181 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDV--SA 236 + ++ + + I + + S E + Sbjct: 182 GTKSIKGMEKDGNNVKMTITDTNTTPPSETPITIDLSTIGSGT------PPETAESLFKV 235 Query: 237 NVNMRGI--RDIMFVAVIGTEFLS-----------------KNLTDGA------------ 265 +N +G DI +A + F S N A Sbjct: 236 ALNGQGFADSDIGRLAGMVPSFDSLDQIGSELNVEVSQGVLINYNKNAVDLLEGNGTNIM 295 Query: 266 ---------------RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 ++V+T + + V + +++ RA +G + + + +++N Sbjct: 296 STLNKIITNLGTGGDQSVITGECIGEVDDIIKNLLQHRAEVGAMQNRMESAQDKNESENL 355 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +SK+ ++ Q S + + + K+ +IL+YL Sbjct: 356 DMTDILSKTEDIDFTEKMIQYSIMQTVYMAALQTSAKILPATILDYL 402 >gi|302871569|ref|YP_003840205.1| flagellar hook-associated protein 3 [Caldicellulosiruptor obsidiansis OB47] gi|302574428|gb|ADL42219.1| flagellar hook-associated protein 3 [Caldicellulosiruptor obsidiansis OB47] Length = 315 Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 106/352 (30%), Gaps = 41/352 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + I + K + +M G+ Y L + + I + Sbjct: 3 ITNNMMVNNFLINLNKNLKRLDDIQYKMAIGKKIRYPSDDPVITARSLRLRTDVSEIEQL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++ L+ + + +Q + V G A + + + Sbjct: 63 QKNVDDAVSWVDTTESALADINESLQRVRELAVRGANGTNTKEDMAQIAKEVAQIKQHII 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N G+Y+FSG + P+N + ++ + + Sbjct: 123 QVGNTNYAGRYIFSGFKTDTAPINSDGSF-----------------SDTGDFSSSGGYSI 165 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + F + A+ NI I + N + Sbjct: 166 DLSTGNNIIQF-----ELM-----------KANYININKTANQVFYIQGETDENKGNLFK 209 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 ++ + + +LS + + + ++ QR +G + + + L Sbjct: 210 VLDNLINALQNGDA--------TTVNSLLSDIDRHIDNVVAQRGDVGALQNRLELIKNRL 261 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + N T +S + V+ QL T N + ++ ++L++L Sbjct: 262 SDDNVNFTTLLSNNEDVDMAEIIMQLKTAENVYRAALQTGAQILPPTLLDFL 313 >gi|255099396|ref|ZP_05328373.1| flagellar hook-associated protein [Clostridium difficile QCD-63q42] gi|255305253|ref|ZP_05349425.1| flagellar hook-associated protein [Clostridium difficile ATCC 43255] Length = 310 Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 115/352 (32%), Gaps = 44/352 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST + ++ + K++ ++ T + + + IL + E + Sbjct: 3 VSTGMMSSSYLNSLQDNLQRLDKVNRQVNTTKEINKLSDNPYKAIKILNSKSEIKTMETY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L T+ L + K++ D+ LV +G +++ + + + Sbjct: 63 VENCKDTGNWLETTDTALDQLGKLLSDIKKTLVASGDGAYSDDELKTLSNETNEKMKEIA 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N T EG+Y+FSG N+ P+ D F+ L +S S+ Q + V Sbjct: 123 NALNATHEGKYIFSGSNTGVPPVECIDNADGSVSLKFNSSLNLNKLNDSLSMDIAQGISV 182 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 N + + + ++ NI ++ N Sbjct: 183 -DYNVKLSSLGFDPTKTDPFEELN-----------NISKKL-----------ANPDA--- 216 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 A LT L ++Q + + R++ G + + Sbjct: 217 ------------------DAIKELTTTCLGDMEQLIENTVNVRSIYGTKANTVEAMKEKN 258 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +S++ ++ QL + S KL +SIL+Y+ Sbjct: 259 DDSLIQLKDILSQNEEIDYGEKLVQLKAAELTYQASLQTGGKLFNVSILDYI 310 >gi|16080593|ref|NP_391420.1| flagellar hook-associated protein FlgL [Bacillus subtilis subsp. subtilis str. 168] gi|221311491|ref|ZP_03593338.1| flagellar hook-associated protein FlgL [Bacillus subtilis subsp. subtilis str. 168] gi|221315818|ref|ZP_03597623.1| flagellar hook-associated protein FlgL [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320733|ref|ZP_03602027.1| flagellar hook-associated protein FlgL [Bacillus subtilis subsp. subtilis str. JH642] gi|221325018|ref|ZP_03606312.1| flagellar hook-associated protein FlgL [Bacillus subtilis subsp. subtilis str. SMY] gi|2829830|sp|P96501|FLGL_BACSU RecName: Full=Flagellar hook-associated protein 3; Short=HAP3 gi|1762339|gb|AAC44947.1| flagellar-hook associated protein 3 (HAP3) [Bacillus subtilis subsp. subtilis str. 168] gi|2636066|emb|CAB15557.1| flagellar hook-filament junction [Bacillus subtilis subsp. subtilis str. 168] Length = 298 Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 40/346 (11%), Positives = 101/346 (29%), Gaps = 58/346 (16%) Query: 12 FERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSL 71 + + +K KL ++ +G+ L++ + + + + + S Sbjct: 10 QNSLRYIGSSYSK-LDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQ 68 Query: 72 VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT 131 L ++ +++ I+ + V + ++ E + AN Sbjct: 69 AFTWLENTETNITEGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIANTQ 128 Query: 132 DEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQ 191 G+Y+F+G NS + P+ G S A Sbjct: 129 VNGRYIFNGTNSDKPPVTD----------------------------NGDGTYTISDTAD 160 Query: 192 QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAV 251 + + + K + D A ++ S N+ + E S + Sbjct: 161 VVVNISNNMSLKVNSDPKSAFGGTSESGQNVFEMLDSFEKALNSGS-------------- 206 Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + + L D + G+ +R+ LG + L + Sbjct: 207 --LDGMDSVLND-------------IDHFSDGMSAERSDLGARYNRLELVNTRLSAQEET 251 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S + VE + + + + ++ + +++++L Sbjct: 252 ATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQPTLIDFL 297 >gi|187778687|ref|ZP_02995160.1| hypothetical protein CLOSPO_02282 [Clostridium sporogenes ATCC 15579] gi|187772312|gb|EDU36114.1| hypothetical protein CLOSPO_02282 [Clostridium sporogenes ATCC 15579] Length = 320 Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 111/354 (31%), Gaps = 39/354 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + ++ ++ +++ +G++ A V ++ + + Sbjct: 3 ITNNMMANSFMTDMNNNLENLDRIRQQLTSGKNFSKPSHDPAGVIRSMQLYSGIDANKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S V L + L + K + + L + + S Sbjct: 63 NKNISNVINWLDVTDTALDQVGKQLGKIRDKLEEAGNPGFGETERKALKDEVNGIIASMS 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N T +G+Y+FSG + KP G + S D ++ ++ L E Sbjct: 123 QTLNTTFDGKYIFSGTRVTGKP-TGVQKDATTKNNSID-----YVNKDGSIPLDPAGDEY 176 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM--RGI 243 +QM +K I + ++ + G Sbjct: 177 -----KQME-------------------------QKLKAEISEGVVMEYNVTATEVLEGG 206 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 D+ + L + L L + + L ++ RA +G + ++ + Sbjct: 207 GDLRRFLEDIVKHLDSDDPKEISK-LYGDDLGNIDKALDNVLRIRAEVGAKQNRMDAAKE 265 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + N + +S V + + + L + S + K+ + ++++YL Sbjct: 266 MNKETNFNMTEILSNIEDVNLVEKNMEYAILQSVYISSLQTSAKVLQPTLMDYL 319 >gi|152990393|ref|YP_001356115.1| flagellar hook-associated protein 3 FliC [Nitratiruptor sp. SB155-2] gi|151422254|dbj|BAF69758.1| flagellar hook-associated protein 3 FliC [Nitratiruptor sp. SB155-2] Length = 413 Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 57/408 (13%), Positives = 132/408 (32%), Gaps = 57/408 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST +F R + + E+ +G+ + L+ + I Sbjct: 3 ISTLGVFNRYLSNITKYQNKIERYSNELSSGKKVFVPSDAPVDNSRALQLKSLAKEIDGY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDSYESF 124 + + L + +S ++ L ++ + D +V +L G D+ I L++ + Sbjct: 63 MRNIDLASNSMSIAETSLKNVSEAALDARVDIVQLLNTGVLDSEDANIFKDYLQNVRDYI 122 Query: 125 VTFANMTDEGQYLFSGINSSEKPLN-GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 ++ +N+ YLF G +S P + F + S + S + + Sbjct: 123 ISQSNVRIGSNYLFGGEDSKTVPFDENGFYQGSSVEVSVPVAKATEVVTKFNGENYLSTI 182 Query: 184 EVSSMNAQQMTDFIKQLEDKFS----DDEYWANNWSNASDHNIKYR---IKDTEGI---- 232 + ++N ++ + + D D E + + N+ + I TE Sbjct: 183 QSGTLNDKKQKIGLVKAIDDIIAIIEDGEIYKLHGKNSELGYLSPNDALISSTETAGTIT 242 Query: 233 --------------DVSANVNMRGIRDIMFVA--------------------VIGTEFLS 258 D + + N +++++ ++ F Sbjct: 243 INYKDVTLNIDYDSDTTDSTNPSTLQELVDAINNAPANNGNITAYTFTDKDGIVRLGFAG 302 Query: 259 KNLTDGARNVLTKKMLSTVQ----------QGLSGIIEQRAVLGISEKNINEERVFLQNK 308 K +T + + + QG G+ R ++G+ E+ ++ + +N Sbjct: 303 KETDKDIEVTITGDLQNHLGGFQYILDEFDQGFEGVERHRGMIGVQEQLVDNLKEQHENF 362 Query: 309 NNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 + SK + A L + + + ++LS+L Y Sbjct: 363 KVNYNDLASKFEDSDYAEAIVNLEKAKTTYQATLASFMQNKELSLLKY 410 >gi|254294558|ref|YP_003060581.1| hypothetical protein Hbal_2204 [Hirschia baltica ATCC 49814] gi|254043089|gb|ACT59884.1| hypothetical protein Hbal_2204 [Hirschia baltica ATCC 49814] Length = 300 Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 124/354 (35%), Gaps = 55/354 (15%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 + I+T+ + + I ++ K + + + + G++ +++ + +I Sbjct: 2 SRITTAMVSQNALIDLQKSQKVLFEASNQTASQTKATDLKGYGSQTHTLVSSNRMIANIQ 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 R+ + + + RLS A L+ +++++D+ ++L+ + + I+A + +++ Sbjct: 62 SRIDNAAELDARLSMQDAVLTHSREVMEDLRS---VILQDISLSGPSSIDAK-IEEAFLV 117 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 N+ G+ +F G + + P+ D +A + + +E + ++ Q + Sbjct: 118 LKDSFNLEISGKSVFGGTRTDKPPVVAASVADLVA-NPIENAFEQGAQEQTVNVDGYQEI 176 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 ++ + A+ L+ + Y E D Sbjct: 177 SLAPVAAEAAEAAFDMLKTLAAGGPY-------------------GELTDAQVTA----- 212 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 K L+ + G+++ A G ++ I Sbjct: 213 --------------------------LKGELAQFDTVIDGLVQLEARNGNTQSRITNAIE 246 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + N I + + V+ A+LS + S I ++ L++L+ L Sbjct: 247 RQTTQVNAIGATVGEITYVDLAEVAARLSNAQTTYQASASIFNTVRGLTLLDVL 300 >gi|71906398|ref|YP_283985.1| flagellar hook-associated protein FlgL [Dechloromonas aromatica RCB] gi|71846019|gb|AAZ45515.1| Flagellin, N-terminal [Dechloromonas aromatica RCB] Length = 326 Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 110/353 (31%), Gaps = 32/353 (9%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++ + L L ++ TG+ L Q + A Sbjct: 5 ISTQQLYNGGVSGIQRLQSSLYTLQNQIDTGRKIVTPKDDPVGSAQALVVSQANSVNALY 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 L + + T +L+ + L + +Q++ V G + A L + + + Sbjct: 65 LKNQASATTKLNGLDSILGGVNDQLQNIYEKAVAAGNGSYSDTDRAAVATELSERLNNLI 124 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN D G+Y+F+G S+ +P + S + + + + + Sbjct: 125 GLANSQDGTGRYVFAGFQSTTQPFSLSANPAST------TNPSAYSLSPANAYINYNGDD 178 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + ++ ++ SD ++ R D S N R + Sbjct: 179 GAQTLQVSASESVQTNLPG--------------SDVFMRIR-------DSSGNATGRSVF 217 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 D + V + + + + +++ G+ A E N Sbjct: 218 DAVQNMVEFLKTPGASASSSRYTTALGDISASIATVSKGLSTVGARASSLESMTNTAGDR 277 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +S ++ +A +S ++E + KLS+ +++ Sbjct: 278 ----KLQYEEQLSNLQDLDYASALTAVSQQKLQLEAAQSTFALTSKLSLFDHI 326 >gi|259908805|ref|YP_002649161.1| Flagellar hook-associated protein 3 [Erwinia pyrifoliae Ep1/96] gi|224964427|emb|CAX55936.1| Flagellar hook-associated protein 3 [Erwinia pyrifoliae Ep1/96] gi|283478786|emb|CAY74702.1| Flagellar hook-associated protein 3 [Erwinia pyrifoliae DSM 12163] gi|310767297|gb|ADP12247.1| Flagellar hook-associated protein 3 [Erwinia sp. Ejp617] Length = 321 Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 121/349 (34%), Gaps = 36/349 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST I+++ + N +K E+ TG + + Q ++ ++ Sbjct: 3 LSTGMIYDQQIQGIQSANSSWLKAGNELATGNRVNKPSDDPVAAAQAVVLSQAQSETSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + T+ ST + L + +V +V G A L + Sbjct: 63 ETARVFATQNQSTEETTLKQVADVVISAQTTVVAASTGTLSGEDRASYATQLEGIRGQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F+G S + P FT D+ K ++ ++ + Sbjct: 123 NLANSTDGNGRYMFAGYQSDKAP----FTSDAGGKVTYIGGNVPIAQK-----VDASRTL 173 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V++ +Q+ D + K D +N D IK Sbjct: 174 VTNHTGKQVFDSLTSDAVKEPDGAASESNIFTILDTAIKS-------------------- 213 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + + T A + K+ ++ L+ + R+ +G + + ++ Sbjct: 214 ------LKVSLTGADKATVDADGEVMAKVNRGLRNVLNNVSSVRSEIGTNLQELSNLDSK 267 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + T +S +G + A ++ + ++ SY + ++ KLS+ Sbjct: 268 GDDTALSLKTQMSSLVGADTTEAISEYTLQQAALKASYTVFQQMSKLSL 316 >gi|28211375|ref|NP_782319.1| flagellar hook-associated protein 3 [Clostridium tetani E88] gi|28203816|gb|AAO36256.1| flagellar hook-associated protein 3 [Clostridium tetani E88] Length = 316 Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 114/354 (32%), Gaps = 43/354 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + + +++ +G+ +V ++ E + + Sbjct: 3 ITNKMLANNFLTDMTTNLNNLQTIQQQLTSGKEIRRPSDDPIKVARAMQLHSEISANQQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L + L + + Q + LV +++ +++ Sbjct: 63 NENIKDTLSWLEQTDTALGQLGEQSQRVRELLVSAGNAAYGSDERKKINDEVKEIVGQMS 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ--MLQGFLEENSKSLLAGQHL 183 N + +G+Y+F G + KP+N K A++ + + ++E + ++ Sbjct: 123 QTLNASFDGRYIFGGTRGTSKPVNVKDNKLVYAERDGSELGAAEKIMKEKLVTEISQGVR 182 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 ++ A + F A N R + Sbjct: 183 IEYNITATEAMQFKD-------------------------------------AKGNDRDL 205 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 RDI+ V E D +TK L + + ++ R+ +G + Sbjct: 206 RDILEKIVEHLESPD----DDKIKEITKGDLEALDAVMDNTLKLRSQVGAKGNRMESALE 261 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +N + +SK+ ++ + + I+ + + ++ + ++++Y+ Sbjct: 262 KNKEENFNLKEILSKTEDIDLAEKSMEFAVAISVYMSALQTSARVLQPTLMDYV 315 >gi|83594185|ref|YP_427937.1| hypothetical protein Rru_A2853 [Rhodospirillum rubrum ATCC 11170] gi|83577099|gb|ABC23650.1| hypothetical protein Rru_A2853 [Rhodospirillum rubrum ATCC 11170] Length = 515 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 48/143 (33%), Gaps = 6/143 (4%) Query: 221 NIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVL------TKKML 274 + + RI D I N + I + ++ + L Sbjct: 373 STQQRIDDDRSITTGINAKNPAFEKALRAMAIIAQGDLQSNPGRVQQALNLLGDSVDHSP 432 Query: 275 STVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTL 334 + + + V+G+++ + Q+ + V++ A +LS Sbjct: 433 QNTSELSGDLTDVAQVIGLNQATVKRTSTEQQSYLTFLQNRSGDIETVDKTEALVRLSDD 492 Query: 335 INKIEMSYMITTKLQKLSILNYL 357 ++ S+ +++ LS+++YL Sbjct: 493 AQALQASFAAFSRITSLSLVSYL 515 Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 85/259 (32%), Gaps = 25/259 (9%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 + T S + + K ++ T Q S L A ++ E E + +++ Sbjct: 8 VGTYSQRSSLVGQMLAIQKRLTDTQTQVNTEQKSQDYTGLSADAFRLVSMENESSRVSQF 67 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLE-------GKTDNNKFPINAGMLR 118 + +N++V+ RL + + ++ K V+D L + + + K Sbjct: 68 MKTNTVVSSRLKVASTSVEAVDKTVRDFRSQLSLFSQVDLTKPLTDEETTKLKDLQNRAF 127 Query: 119 DSYESFVTFANMTDEGQYLFSGINSSEKPLN----------------GYFTKDSLAKKSF 162 ++ +S + N +G YLF+G + P++ S A Sbjct: 128 EALKSTEYYLNNQHDGSYLFAGGRTDTPPVDIPYNTLEEFQNVFNGKTVTYPQSRAANLA 187 Query: 163 DQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNI 222 D + G + +L ++ A D K D + A N + AS + Sbjct: 188 DAKVAGTMTVAPGALATDPGTITAA--AGSFIDATKTETGVGGDLTFTAANNTVASPQFV 245 Query: 223 KYRIKDTEGIDVSANVNMR 241 I + I V Sbjct: 246 GTTIAAGDVIRVDMGATGP 264 >gi|225166311|ref|ZP_03728000.1| Flagellin and related hook-associated protein-like protein [Opitutaceae bacterium TAV2] gi|224799448|gb|EEG17988.1| Flagellin and related hook-associated protein-like protein [Opitutaceae bacterium TAV2] Length = 311 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 73/202 (36%), Gaps = 6/202 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+T ST + R+ L++ +L ++ TGQ A V IL + E+ Sbjct: 1 MRT---STLTTTHRLIDQLTRLSERQTRLQNQVATGQRVTVPGDDPAAVGRILSNQMEQR 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +A+ ++ S + + + LS ++ I G L L G T + A L Sbjct: 58 QVAQYQNNASKALEYSEATYSTLSDLKGISDRA-GELATLGAGATSTDAMTAYAVELDQL 116 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + AN G YL SG + +P D +++ + S + Sbjct: 117 IQQALDLANTRFSGDYLLSGTATDTQPFTLATDADGNTTITYEG--NTDQRTIALSETSH 174 Query: 181 QHLEVSSMNAQQMTDFIKQLED 202 + + F+ +L D Sbjct: 175 LAPGTTGDTNHAIATFLNRLID 196 >gi|167576669|ref|ZP_02369543.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis TXDOH] Length = 304 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 119/354 (33%), Gaps = 54/354 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+++ M + ++ + M T + + Q + + Sbjct: 3 ITSNQYHSIMAQVNRQATAGLMDTQIRMATEKRILRPSDDPTGAVRLALLVQADATLDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQD-MVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + +++ RL S+ +S + +Q+ V L + ++G A +L ++ Sbjct: 63 RATGAMLNNRLQHSERVMSGIVDQLQNEAVKHLGLAMDGSRSPEDLSAYAQVLASVRDTL 122 Query: 125 VTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + AN D G YLFSG + P+ + ++ +F+ L E +++ Sbjct: 123 LQSANARDSSGNYLFSGTAITTAPIRFDPAAPAGSRYTFEGNL-----EKQTAVVGDGVT 177 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 EV++ N +M D + L++ + + AN N Sbjct: 178 EVANDNLAEMADALNALDEAIAKMS------------------------EPDANPNDPAY 213 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 RD + ++ T++ L+ + + +G ++ + Sbjct: 214 RD-----------------------VLGRVTDTIESVLASVNAKIGQMGSAQARLQMLDE 250 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + + + + + ++ S + ++ +L++LN L Sbjct: 251 LHESAQIVGNQAALDVGKISPEEVFTDYQSYMVALQASQKLYAEVTQLTLLNVL 304 >gi|321313087|ref|YP_004205374.1| flagellar hook-associated protein FlgL [Bacillus subtilis BSn5] gi|320019361|gb|ADV94347.1| flagellar hook-associated protein FlgL [Bacillus subtilis BSn5] Length = 298 Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 41/346 (11%), Positives = 104/346 (30%), Gaps = 58/346 (16%) Query: 12 FERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSL 71 + + +K KL ++ +G+ L++ + + + + + S Sbjct: 10 QNSLRYIGSSYSK-LDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQ 68 Query: 72 VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT 131 L ++ +++ I+ + V ++ ++ E + AN Sbjct: 69 AFTWLENTETNITEGIDILSKVRELAVEAQNDTNGESERQAIGVEVKQLKEQLLNIANTQ 128 Query: 132 DEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQ 191 G+Y+F+G NS + P+ G S A Sbjct: 129 VNGRYIFNGTNSDKPPVTD----------------------------NGDGTYTISDTAD 160 Query: 192 QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAV 251 + + + K + D A ++ S N+ Sbjct: 161 VVVNISNNMSLKVNSDPKSAFGGTSESGQNV---------------------------FE 193 Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + F K L G+ + + +L + G+ +R+ LG + L + Sbjct: 194 MLDSF-EKALNSGSLDGM-DSVLDDIDHFSDGMSAERSDLGARYNRLELVNTRLSAQEET 251 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S + VE + + + + ++ + +++++L Sbjct: 252 ATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQPTLIDFL 297 >gi|147678446|ref|YP_001212661.1| flagellar hook-associated protein FlgL [Pelotomaculum thermopropionicum SI] gi|146274543|dbj|BAF60292.1| flagellin and related hook-associated proteins [Pelotomaculum thermopropionicum SI] Length = 300 Score = 66.3 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 93/309 (30%), Gaps = 55/309 (17%) Query: 49 VTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN 108 T ++ + + S + T+++ L ++ +Q V G D Sbjct: 46 ATRVVTLNSVLKQHDQYEQNISDAKNWIETTESTLGNVTDALQRAREQAVYGANGTLDQT 105 Query: 109 KFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQG 168 A + + +++ V AN G+Y+F G ++ KP K + + Sbjct: 106 SREAIAQEIDNIFDNIVQLANTNFAGRYIFGGTKTTTKPFESDGEYKGNEGKEGELKWE- 164 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKD 228 + + + ++ +V + + I + +N++ ++ Sbjct: 165 -ISQKVEMIVNIDGKKVFGDTSAAGDNGIFTVL------------------NNLRAHLRS 205 Query: 229 TEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQR 288 + ++ L + + ++GI+ R Sbjct: 206 GDT-----------------------------------QAVSNTDLGELDRVINGILNLR 230 Query: 289 AVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKL 348 A LG + + + +SK V+ S N + + ++ Sbjct: 231 ASLGAKANRLETATSQSGGERTNYEALLSKLNDVDLAKVVTDFSMQENVYQAALSTGARI 290 Query: 349 QKLSILNYL 357 S++N+L Sbjct: 291 ILPSLVNFL 299 >gi|83716911|ref|YP_438396.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis E264] gi|167614844|ref|ZP_02383479.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis Bt4] gi|257141429|ref|ZP_05589691.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis E264] gi|83650736|gb|ABC34800.1| flagellar hook-associated protein 3, putative [Burkholderia thailandensis E264] Length = 304 Score = 66.3 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 119/354 (33%), Gaps = 54/354 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+++ M + ++ + M T + + Q + + Sbjct: 3 ITSNQYHSIMAQVNRQATAGLMDTQIRMATEKRILRPSDDPTGAVRLALLVQADATLDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQD-MVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + +++ RL S+ +S + +Q+ V L + ++G A +L ++ Sbjct: 63 RATGAMLNNRLQHSERVMSGIVDQLQNEAVKHLGLAMDGSRSPEDLSAYAQVLASVRDTL 122 Query: 125 VTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + AN D G YLFSG + P+ + ++ +F+ L E +++ Sbjct: 123 LQSANARDSSGNYLFSGTAITTAPIRFDQAAPAGSRYTFEGNL-----EKQTAVVGDGVT 177 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 EV++ N +M D + L++ + + AN N Sbjct: 178 EVANDNLAEMADALNALDEAIAKMS------------------------EPDANPNDPAY 213 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 RD + ++ T++ L+ + + +G ++ + Sbjct: 214 RD-----------------------VLGRVTDTIESVLASVNAKIGQMGSAQARLQMLDE 250 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + + + + + ++ S + ++ +L++LN L Sbjct: 251 LHESAQIVGNQAALDVGKISPEEVFTDYQSYMVALQASQKLYAEVTQLTLLNVL 304 >gi|254973893|ref|ZP_05270365.1| flagellar hook-associated protein [Clostridium difficile QCD-66c26] gi|255091278|ref|ZP_05320756.1| flagellar hook-associated protein [Clostridium difficile CIP 107932] gi|255312937|ref|ZP_05354520.1| flagellar hook-associated protein [Clostridium difficile QCD-76w55] gi|255515696|ref|ZP_05383372.1| flagellar hook-associated protein [Clostridium difficile QCD-97b34] gi|255648790|ref|ZP_05395692.1| flagellar hook-associated protein [Clostridium difficile QCD-37x79] gi|260682010|ref|YP_003213295.1| flagellar hook-associated protein [Clostridium difficile CD196] gi|260685608|ref|YP_003216741.1| flagellar hook-associated protein [Clostridium difficile R20291] gi|306518907|ref|ZP_07405254.1| flagellar hook-associated protein [Clostridium difficile QCD-32g58] gi|260208173|emb|CBA60495.1| flagellar hook-associated protein [Clostridium difficile CD196] gi|260211624|emb|CBE01863.1| flagellar hook-associated protein [Clostridium difficile R20291] Length = 310 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 115/352 (32%), Gaps = 44/352 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST + ++ + K++ ++ T + + + IL + E + Sbjct: 3 VSTGMMSSNYLNSLQDNLQRLDKVNRQVNTTKEINKLSDNPYKAIKILNSKSEIKTMETY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L T+ L + K++ D+ LV +G +++ + + + Sbjct: 63 VENCKDTGNWLETTDTALDQLGKLLSDIKKTLVASGDGAYSDDELKTLSNETNEKMKEIA 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N T EG+Y+FSG N+ P+ D F+ L +S S+ Q + V Sbjct: 123 NALNATHEGKYIFSGSNTGVPPVECIDNADGSVSLKFNSSLNLNKLNDSLSMDIAQGISV 182 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 N + + + ++ NI ++ N Sbjct: 183 -DYNVKLSSLGFDPTKTDPFEELN-----------NISKKL-----------ANPDA--- 216 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 A LT L ++Q + + R++ G + + Sbjct: 217 ------------------DAIKELTTTCLGDMEQLIENTVNVRSIYGTKANTVEAMKEKN 258 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +S++ ++ QL + S KL +SIL+Y+ Sbjct: 259 DDSLIQLKDILSQNEEIDYGEKLVQLKAAELTYQASLQTGGKLFNVSILDYI 310 >gi|291486093|dbj|BAI87168.1| flagellar hook-associated protein FlgL [Bacillus subtilis subsp. natto BEST195] Length = 298 Score = 66.3 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 41/346 (11%), Positives = 103/346 (29%), Gaps = 58/346 (16%) Query: 12 FERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSL 71 + + +K KL ++ +G+ L++ + + + + + S Sbjct: 10 QNSLRYIGSSYSK-LDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQ 68 Query: 72 VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT 131 L ++ +++ I+ + V + ++ E + AN Sbjct: 69 AFTWLENTETNITEGIDILSKVRELAVEAQNDTNGEAERQAIGVEVKQLKEQLLNIANTQ 128 Query: 132 DEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQ 191 G+Y+F+G NS + P+ G S A Sbjct: 129 VNGRYIFNGTNSDKPPVTD----------------------------NGDGTYTISDTAD 160 Query: 192 QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAV 251 + + + K + D A ++ S N+ Sbjct: 161 VVVNISNNMSLKVNSDPKSAFGGTSESGQNV---------------------------FE 193 Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + F K L G+ + + +L + G+ +R+ LG + L + Sbjct: 194 MLDSF-EKALNSGSLDGM-DNVLDDIDHFSDGMSAERSDLGARYNRLELVNTRLSAQEET 251 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S + VE + + + + ++ + +++++L Sbjct: 252 ATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQPTLIDFL 297 >gi|303240170|ref|ZP_07326690.1| flagellar hook-associated protein 3 [Acetivibrio cellulolyticus CD2] gi|302592261|gb|EFL61989.1| flagellar hook-associated protein 3 [Acetivibrio cellulolyticus CD2] Length = 302 Score = 66.3 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 102/352 (28%), Gaps = 53/352 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + M K E++ TG+ L+ + + I + Sbjct: 3 ITNNMLVNNMINNIGSNLTRMDKYQEKLATGKKITVPSDDPVVAARALKLRTDVSQIKQH 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L +++ L+++ I+Q V + + + Sbjct: 63 KTNVNDAMSWLEITESALTNVGDILQRARELAVQGSSSSATKDDTQKIEQEVAQLRNQLI 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N T G+Y+FSG + K +N T + + + + +N + G Sbjct: 123 QVGNSTYAGRYVFSGFKTDTKLINDDGTFAIDVDNTESIIYEIGVSDNININVTGGD--- 179 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + A S + D + Sbjct: 180 ------------------LFNAGGVATTGSTGQ---------LVQTFDKYISS------- 205 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 L G ++ ++ + ++ ++ RA +G + L Sbjct: 206 ---------------LNSGNHELIGN-SITDLDNNINNLLRIRAGVGARYNRLELTSNRL 249 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 N +S++ V+Q L + N + S K+ + S++++L Sbjct: 250 DNDEINFTKLMSENEDVDQAENIMLLKSEENVYKASLSGGAKIIQTSLVDFL 301 >gi|225849063|ref|YP_002729227.1| flagellar hook-associated protein 3 [Sulfurihydrogenibium azorense Az-Fu1] gi|225643079|gb|ACN98129.1| flagellar hook-associated protein 3 [Sulfurihydrogenibium azorense Az-Fu1] Length = 313 Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 108/336 (32%), Gaps = 46/336 (13%) Query: 23 NKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAH 82 + K ++ TG S L + I + V L +++ Sbjct: 20 QNEIEKYTRQIATGIKLLSPSDDTVGTVSALRLKTINEDIERYGRNMDFVNTILDSAETQ 79 Query: 83 LSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGI 141 L+S+ Q++ +V +L G D + + + + AN LF G+ Sbjct: 80 LNSIAAAGQEVRVEIVRLLNTGVLDKEDAKVLRDYFVNMKDYIIKQANFKIGDTALFGGV 139 Query: 142 NSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLE 201 + P + D QG E G L F ++ Sbjct: 140 KTQTDPF------------APDGTYQGETVETKVPTAPGVELNT---------TFNGRVY 178 Query: 202 DKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNL 261 ++D ++ TE ID N+ I N Sbjct: 179 LGVNNDTN---------------KMILTETIDKIVNIIDNAISG-------TGSLGDLNT 216 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY-ISKSI 320 + N K+L GL+ +++ R+V+G ++ ++ + ++N + + ISK Sbjct: 217 ATISVNGKNVKLLEAFDIGLNTVMQYRSVIG-TQVKTIQDLKTINDQNKVFNKDLISKLE 275 Query: 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 V+ A L + + + ++LS+L++ Sbjct: 276 DVDVAEAITNLQKAQVAYQALISVFNQNRQLSLLDF 311 >gi|224373380|ref|YP_002607752.1| flagellar hook-associated protein FlgL [Nautilia profundicola AmH] gi|223589952|gb|ACM93688.1| flagellin family protein [Nautilia profundicola AmH] Length = 881 Score = 65.9 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 53/160 (33%), Gaps = 17/160 (10%) Query: 1 MKTTGISTSS--IFERMNILTKELNKDSVKLHEEMVTGQ-----SSDYGLQLGARVTSIL 53 M+ T + + I + L + K+ ++ TG D + T L Sbjct: 12 MRVTQFTQYNNFILNQQRTL-----SELNKVQTQISTGVKIQNMYEDPVV-----YTKYL 61 Query: 54 EWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN 113 + +E N + S S + + L+ + L+ D Sbjct: 62 KLNEEMNSFTQIKTSASFAQTFANETDTVLNDFVSTLGSFKTNLLKAANDTNDETSRSAI 121 Query: 114 AGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 L + AN + +G+YLFSG S KP+N F Sbjct: 122 VSELEGELQHLKDLANTSIDGKYLFSGSKFSTKPINDNFD 161 Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 27/85 (31%) Query: 273 MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLS 332 + + + A +G + S +I + A +L+ Sbjct: 797 AIEAIDHLTDHVRRSHAKIGAVSNEFGLTIERTDMLTLNVQQLQSDNIDTDLGEATMRLN 856 Query: 333 TLINKIEMSYMITTKLQKLSILNYL 357 +L + K+ L++LNYL Sbjct: 857 SLQTSYQALLASIAKVNNLTLLNYL 881 >gi|258513987|ref|YP_003190209.1| flagellar hook-associated protein 3 [Desulfotomaculum acetoxidans DSM 771] gi|257777692|gb|ACV61586.1| flagellar hook-associated protein 3 [Desulfotomaculum acetoxidans DSM 771] Length = 305 Score = 65.9 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 40/354 (11%), Positives = 111/354 (31%), Gaps = 54/354 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +++ + + + +D + ++ +G+ + + + + + + + Sbjct: 3 VTSQIVSHNLKKNIERQMRDIAQNQLDISSGKKLSTLSENPSDLGKAMALKTSLDKQEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++ ++ L+ ++V ++ + + + E Sbjct: 63 KSNIDNAIGWMNQTETALADSAELVLSARDLVLEVGNLGVGETDMKAMSAEVGVIIEQLT 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N Y+F+GI + K F++ N ++ + + Sbjct: 123 ANTNTVLGRSYIFAGIQTDNK----------------------FVDNNPENGYLIEGTDP 160 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM--RGI 243 + T I+ I + V+ + + +G Sbjct: 161 QLYYHGEAT-------------------------GKIRKEIATGITMQVNVSGEVFVKGE 195 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 +I L D +L + Q ++++R +G K++ + Sbjct: 196 NNIFKNLTDLKSALESGDKDKVSELL-----DKLDQNHDSLVQERTAVGGKIKHLENMQE 250 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + N++ + T + GV+ QL+ E S I+ K+ + +IL+YL Sbjct: 251 QMDNQSLNMQTLLENLQGVDTAETTIQLAENKMAYEASLAISAKILQTNILDYL 304 >gi|322421654|ref|YP_004200877.1| flagellar hook-associated protein 3 [Geobacter sp. M18] gi|320128041|gb|ADW15601.1| flagellar hook-associated protein 3 [Geobacter sp. M18] Length = 306 Score = 65.9 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 102/336 (30%), Gaps = 49/336 (14%) Query: 22 LNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQA 81 +L E++ +G + + +L+ + + + + + + L+ + Sbjct: 19 GRSAIDQLQEQIASGYNINRPSDDPLTTRQLLDLQDQIDSGEQYSSNITKAETLLNVTNT 78 Query: 82 HLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGI 141 L+SM ++Q + ++ G D + L V N QY+F+G Sbjct: 79 ALTSMADLMQQVKKIAGDMVTGTLDASSISSAVSNLTQLKSQLVDMGNTRLGDQYVFAGY 138 Query: 142 NSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLE 201 +S+ FD G + L + + D ++ + Sbjct: 139 KTSQP---------------FDAA--GAFSGTTDLLSVEIAPDSNVATTVSGGDLLRGGK 181 Query: 202 DKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNL 261 + + A I + + + +K+ Sbjct: 182 PPAA--------------------------VGSGATAGQGPIDILGSIDALIAAITAKD- 214 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 + + V+ G I ++ + ++ + + + N + T Sbjct: 215 -----SAAITDGVKNVKAGADQITVAQSDVAGRLLRLDNMKSMIASNQNTLKTVFGDIQN 269 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V+ A LS + T+KL +LS+L+Y+ Sbjct: 270 VDYAKAGVMLSQQTTAFNAALSATSKLSQLSLLDYM 305 >gi|115523524|ref|YP_780435.1| hypothetical protein RPE_1505 [Rhodopseudomonas palustris BisA53] gi|115517471|gb|ABJ05455.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 534 Score = 65.9 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 68/209 (32%), Gaps = 9/209 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M +G+S + L L +++ +G+ SD G+ + + + + Sbjct: 1 MTISGVS--GRTSYIGTGILNLRSQLDTLTQQLASGRVSDTYAGQGSGRSLAVSLRAQLS 58 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + V RL+ L+ + I ++ G V DNN Sbjct: 59 GYSSYADTATNVNTRLNVMNLSLTRLVAINSEVKGAAVSA-GNTLDNNGMTAGQKTAALD 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYF---TKDSLAKKSFDQMLQGFLEENSKSL 177 + V N +YLFSG + P+ + A Q++ + + + Sbjct: 118 FTDSVDLLNAQVGDRYLFSGRATDTTPVTEADIILNGNGAAIAGLKQVISERHDADVGTN 177 Query: 178 LAGQHLEVSSMNAQQMT---DFIKQLEDK 203 G+ + + A + D+ Sbjct: 178 GMGRTIVSAGATATSVQIGEDYAADPVGP 206 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 51/143 (35%), Gaps = 5/143 (3%) Query: 220 HNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTE---FLSKNLTDGARNVLTKKMLST 276 RI + + A + + +R + + + L +++ Sbjct: 390 GTAVSRIDEAITVQYGARADEQALRTQLMNVAVFAATKTDATDPYASAKIAALNQRVAQN 449 Query: 277 VQ--QGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTL 334 + G I + +A + ++ +I I T + G+ ++ L Sbjct: 450 LAVIPGTQTIQDIQADVAGAQASIKATTNRQTQAKTITQTMLDSIEGINDDEVATKILAL 509 Query: 335 INKIEMSYMITTKLQKLSILNYL 357 ++ SY T+KL ++S++N++ Sbjct: 510 QTALQASYTTTSKLYQMSLVNFI 532 >gi|291617027|ref|YP_003519769.1| FlgL [Pantoea ananatis LMG 20103] gi|291152057|gb|ADD76641.1| FlgL [Pantoea ananatis LMG 20103] gi|327393478|dbj|BAK10900.1| flagellar hook-associated protein 3 [Pantoea ananatis AJ13355] Length = 320 Score = 65.9 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 43/349 (12%), Positives = 114/349 (32%), Gaps = 37/349 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ IF++ + + +++ TG + + Q + ++ Sbjct: 3 LSTNMIFDQQVRGVSDAQSSWLNAGKQLSTGLRVSNPSDDPIAASRAVVLSQTQAQASQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + LS + L+ + + +V G ++ A L + Sbjct: 63 SVARTFADQGLSLEENTLNGVTNSIMSAQSMIVAAANGSLSDDDRASYATQLEGVRAQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D G+Y+F+G + P + D + Q + + ++ + Sbjct: 123 NQVNSKDANGRYIFAGYKTDSPPFVD-GAGGVTYQGGTDAITQKVDTDRTMTIGHTGNSI 181 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V S+ + + + + + N+ + Sbjct: 182 VMSITSNAVKE-------------------------------PNGGTSET----NLFNML 206 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 D A+ + + + T + K + L+ ++ R+ +G K ++ Sbjct: 207 DSAISALKVPQNGADDATKATFSAAMDKTSRGLSNSLNNVLSVRSEIGTQLKELDTLNAQ 266 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ I D+ +S + V+ A + + ++ SY T + ++S+ Sbjct: 267 GDDRKVIYDSQMSSLVDVDYTQAISSYTMQQQALQASYKTFTDMSQMSL 315 >gi|75675294|ref|YP_317715.1| hypothetical protein Nwi_1101 [Nitrobacter winogradskyi Nb-255] gi|74420164|gb|ABA04363.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 501 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 90/301 (29%), Gaps = 13/301 (4%) Query: 70 SLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA------GMLRDSYES 123 S+ +L + + L+ P + + G T+ + ++ + Sbjct: 201 SVYGMKLQSVSSSLTGATVTGPAGAPPAISIDLGVTNPADGDTVSFTFDLPDGTSETVQL 260 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + T G + ++ S+ + ++ + S+ Sbjct: 261 TASSEAPTPAGSFAIGATPTATAANLNAALTASIGALAGTSLVAASAVQASRDFFGQPPQ 320 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY--RIKDTEGIDVSANVNMR 241 V + ++ + +D W R+ + + N Sbjct: 321 RVDVIPPATLSTATAAVNGTAADTVQWYTGDEGTGSARATSVVRVDASVTVQYGMRANED 380 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTK-----KMLSTVQQGLSGIIEQRAVLGISEK 296 IR +M + + A + ++ +V+ G I + + L ++ Sbjct: 381 AIRSLMESVALLAAVTTSPADPNAADQISALNARVARNLSVEPGSQNIRDIQVDLANAQT 440 Query: 297 NINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 + + + + I ++ + +QL L ++ SY T L +LS++ + Sbjct: 441 MMKDATARQKLTQATMQNIIDQAENISTDEVASQLLALQTDLQASYQTTAMLSQLSLVKF 500 Query: 357 L 357 L Sbjct: 501 L 501 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 44/131 (33%), Gaps = 1/131 (0%) Query: 18 LTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLS 77 + L L ++ +G+ S +GA + + ++IA + + ++ Sbjct: 16 SVRNLKAQMADLQNQLTSGKKSTTYSGMGANGGFAIAARAQLSNIAAYTDTMMKINTNIN 75 Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 + L ++ I + + + + + S V N +Y+ Sbjct: 76 VANTALQALSDIGTQLQNAALSGSQALNSAGQ-TAGQQTAVAQFSSVVGILNTQAGDRYI 134 Query: 138 FSGINSSEKPL 148 FSG +P+ Sbjct: 135 FSGSEIYTQPV 145 >gi|90411012|ref|ZP_01219026.1| flagellar hook-associated protein [Photobacterium profundum 3TCK] gi|90328225|gb|EAS44536.1| flagellar hook-associated protein [Photobacterium profundum 3TCK] Length = 396 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 52/396 (13%), Positives = 142/396 (35%), Gaps = 58/396 (14%) Query: 9 SSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSIL---EWEQEKNHIAER 65 +S+ MN ++ ++ +++ +G+ L G + + ++Q+ I + Sbjct: 12 NSVSNDMNRQQIKVQEN----QQQLASGKRL---LTAGDDPVASIYIQNFDQQNTQIDQS 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S ++ RL+ +A ++ ++ ++ D ++++ G ++ + ++ ++SF+ Sbjct: 65 VKSITMARNRLNNEEAAITEVENLLDDAKRKSMMMVNGSLSSDDRVAHKQDMQGVFDSFM 124 Query: 126 TFANMTD-EGQYLFSGINSSEKPL------------NGYF-------TKDSLAKKSFDQM 165 N D G Y+F+G S++P + Y + D + D++ Sbjct: 125 NLVNSRDESGNYVFAGTQYSQQPFFRDNNGDVAYVGDSYQRMAKIAPSVDVPINDAGDKL 184 Query: 166 LQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKF---SDDEYWANNWSNASDHNI 222 S + Q + + ++ + ++ D + Sbjct: 185 FLEVANPFGDYQPDYTLESGSLLLLSQAKNGNDADQSEYRVDFSTSSGSTSYELYQDGAL 244 Query: 223 KY---------------------RIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNL 261 IKD + I ++ N+ G E ++ Sbjct: 245 VSTAPFDPHKGIQWNTLQVDLKGEIKDGDSIALNRQENVSVFDAFKR----GIELSDSDV 300 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 +D + ++ + QG I R+ +G + ++ + Q+ +++ Sbjct: 301 SDASATAELHQVAEELAQGFKHINRARSEVGTRLQTLDRQEDMHQDFKIVMNEARGTLED 360 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ TA +L+ + ++ S K + L++ NY+ Sbjct: 361 LDYATAVIELNQNMMALQASQQAFAKTKDLNLFNYI 396 >gi|224437569|ref|ZP_03658527.1| flagellar hook-associated protein FlgL [Helicobacter cinaedi CCUG 18818] gi|313144023|ref|ZP_07806216.1| flagellar hook-protein FlgL [Helicobacter cinaedi CCUG 18818] gi|313129054|gb|EFR46671.1| flagellar hook-protein FlgL [Helicobacter cinaedi CCUG 18818] Length = 855 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 57/149 (38%), Gaps = 5/149 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T + +MN + + ++ ++ +G YG Q + L+ E EK Sbjct: 1 MRVTFGTKY---NQMNYYQGTMQSKLMDINTKIASGLKIQYGYQDSSVFNQNLKLEYEKI 57 Query: 61 HIAERLH-SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 ++ + + N T L+ + L+ + + + L+ A L Sbjct: 58 NLDQGIDVGNDAYTSTLN-TDKALAELSQTAEQFNTKLIQAANDIHSPTSREAIARDLEK 116 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPL 148 + + AN + G++LF+G N +P Sbjct: 117 LKDHMINIANTSIGGEFLFAGSNVKIRPF 145 Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 90/277 (32%), Gaps = 28/277 (10%) Query: 94 VGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGY-- 151 I L D + SY + N+ N S +P+ Y Sbjct: 594 QAEFSIPLYNPHDEPPAVTISKADDVSYRQLLDAINIAL---------NYSNQPMEYYQN 644 Query: 152 -----FTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSM--NAQQMTDFIKQLEDKF 204 K +++ +L S L +E+S + +M + Sbjct: 645 AQAQKGVPTQEGKNAYESLLAQTKGRVSAYLTQDGRIEISDEMRSVSRMKFMMYNNASND 704 Query: 205 SDDEYWANNWSNAS-DHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTD 263 ++ N S+ + + N I + DV+ ++ GI + + V + T Sbjct: 705 FSEQGIRNYRSSLTFNANNALTIDEP---DVNFFKSLDGIIESVRAGVYRPDAFGDEYTS 761 Query: 264 GARNVLTKKMLSTVQQGLSGIIEQRAVLG---ISEKNINEERVFLQNKNNIIDTYISKSI 320 RN + + I + A+ G S +N+ L+ + I + +I Sbjct: 762 EMRNKGIQNAIELFGHLSDHIEKMIALNGAHSRSFENVIRRNEVLRVQIESIKS---DTI 818 Query: 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 G + + S L T+++ ++S++NYL Sbjct: 819 GTDVAETYNHFSNLTTNYNAVLASTSRINQMSLVNYL 855 >gi|149375026|ref|ZP_01892799.1| Flagellin and related hook-associated protein [Marinobacter algicola DG893] gi|149360915|gb|EDM49366.1| Flagellin and related hook-associated protein [Marinobacter algicola DG893] Length = 403 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 58/402 (14%), Positives = 129/402 (32%), Gaps = 52/402 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS+ IF +ELN + E++ TG+ + IL+ +QE + I Sbjct: 4 ISSQQIFSGGINRLQELNSSLNQTQEQISTGKRVNKPSDDPVAAARILKLDQELSRIETY 63 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L RL ++ L+S ++Q + V G + + +++ Sbjct: 64 QRNAGLAENRLQQEESALASSVDVIQRIRELTVQAGNGSLSPSDRKSISSEMKERIGQLA 123 Query: 126 TFANMTD-EGQYLFSGINSSEK-----------------------------PLNG----- 150 AN D G+Y+FSG S P++ Sbjct: 124 NIANTRDASGEYIFSGFQGSTAAFGKDASGSWVYQGDEGQRVLEIDDGVTVPISDHGKGI 183 Query: 151 YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT---DFIKQLEDKFSDD 207 Y + + D + + +S+++ +T D + + Sbjct: 184 YSSVPAAVFAESDPGNAAAARID--GIQVADDGALSAVSPDDITITVDTVAGTVSAVNSR 241 Query: 208 EYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI------RDIMFVAVIGTEFLSKNL 261 + A+ + + ++ N R +F + N+ Sbjct: 242 TGDPLTVTPAAYTSGESFEVAGVQATITDAGNGDEFTLRTGERQSVFATIENLIDGLDNI 301 Query: 262 T------DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 A + L L + I++++ +G ++ + FL++ + + Sbjct: 302 DKTSPAGQAAYDDLIAASLQNLDNAQESIVQKQTEIGGRLNAVDSTKSFLEDSSVYSEDI 361 Query: 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S+ V+ A + LS ++ + ++ +LS+ + L Sbjct: 362 RSQLRDVDYAEAISNLSFQSFVLQAAQQSFAQVSQLSLFDRL 403 >gi|16125151|ref|NP_419715.1| flagellin [Caulobacter crescentus CB15] gi|221233879|ref|YP_002516315.1| flagellar hook-associated protein FlgL [Caulobacter crescentus NA1000] gi|13422163|gb|AAK22883.1| flagellin, putative [Caulobacter crescentus CB15] gi|220963051|gb|ACL94407.1| flagellar hook-associated protein FlgL [Caulobacter crescentus NA1000] Length = 307 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 100/354 (28%), Gaps = 49/354 (13%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T +ST + M + ++ ++ + + + + + I Sbjct: 2 TRVSTVQNYNVMTSNLMKAQIRQNEVGGQVASQKVATDLRGYAKNAEVLTAMRSAQTKIN 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 L LVT RL + + +D + L+ ++ Sbjct: 62 GLLDQTKLVTNRLEMQNTGIGRVADATKDAREAIA----NAMAAGNATTLMQQLQAAFSE 117 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 V N G Y+FSG + T ++A + + + Sbjct: 118 VVQGVNTKSNGLYVFSGAQTQTA----TTTAATMADLTAAPSTASLFQNDQYITTNRVDE 173 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + ++ D F Sbjct: 174 QTNAKTGVLGDALGTATFDAFKQ------------------------------------- 196 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + + + NL D N L MLST +++ + G+++K + Sbjct: 197 ---VQAYIDANGPFTGNLNDTQVNFLKG-MLSTFDSAYKSVVDIQGKNGVNQKRFEAAEI 252 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L N+ + + T + + V+ A +L ++ S + + LQ S+LN L Sbjct: 253 DLSNQADTLTTMVGGIVDVDMAEAITRLEAAKLAVQASAQVFSSLQASSLLNVL 306 >gi|83589599|ref|YP_429608.1| flagellar hook-associated protein FlgL [Moorella thermoacetica ATCC 39073] gi|83572513|gb|ABC19065.1| Flagellin-like protein [Moorella thermoacetica ATCC 39073] Length = 305 Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 94/333 (28%), Gaps = 50/333 (15%) Query: 25 DSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLS 84 + + E+M +G+ + V +L ++ + + L S++ L Sbjct: 22 NMARTQEQMSSGKRVNRPSDDPIVVARVLAFKTSIAANDQYKKNMEDAKGWLDASESVLG 81 Query: 85 SMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSS 144 ++Q V G + + + AN + G+Y+F G ++ Sbjct: 82 MATDVLQRARELAVYGSNGTMPPESMDALGKEVDQLLDEMMQVANTSYGGRYIFGGSQTT 141 Query: 145 EKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKF 204 P VS+ ++ + Sbjct: 142 ATPF------------------------------------VSNSSSTD--------DPVE 157 Query: 205 SDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDG 264 + + A NW A I + + N N I + + L Sbjct: 158 YNGDSAALNWEIAPGVTISVNENGDQIFMQAIN-NGSATESIFKLLNDLSAALHGGTATD 216 Query: 265 ARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQ 324 L K Q + I+ RA LG + L++ + +SK ++ Sbjct: 217 VSATLNK-----FDQAIDHILNIRATLGAKSNRMEMAMSRLEDTQIGLTQTMSKLEDIDL 271 Query: 325 HTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 T N S K+ + S+++YL Sbjct: 272 AETVMNYKTQENVYLASLSTGAKVLQPSLIDYL 304 >gi|87306350|ref|ZP_01088497.1| probable flagellar hook-associated protein 3 [Blastopirellula marina DSM 3645] gi|87290529|gb|EAQ82416.1| probable flagellar hook-associated protein 3 [Blastopirellula marina DSM 3645] Length = 1243 Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 55/147 (37%) Query: 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHI 62 TT +S ++ R+ + L ++ TG+ + + Sbjct: 9 TTRVSDGNLHSRLLSQLAASQANLFSLQNQLSTGRRLLAPSDDAPAAIRGITLQSLIERK 68 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + + S L+ + ++ ++ +M G V +++ + + + L+++ + Sbjct: 69 TQISVNLSTSQSYLAATDTAMAGAADLLAEMRGLAVTMVDSTATDTEVAAASQTLQNALQ 128 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPLN 149 FV N G++LF G N++ P Sbjct: 129 QFVDIGNRQFRGRFLFGGSNTTTTPFT 155 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 90/280 (32%), Gaps = 9/280 (3%) Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 ++ + S + + ++ + N + L Sbjct: 973 SADTAMESDPTNNGEGLIVQTGVIASTNGGTPIADAEPAAASVSFAMPEDLNTAFTLESL 1032 Query: 138 FSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFI 197 + G ++ + D+LA S + + + S+ AG +NA + Sbjct: 1033 YPGTAHNDVRIVF---NDTLASGSPTAVYNSGSKTLTLSIDAGVTTTEEIINAINLEGTF 1089 Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 D+ D +A+ E + + N R+ V + Sbjct: 1090 HSQLDRSVDITNDGTGVVSATGTVGTTSGGTAEVM-TGKDANP---RETKSVFNTLIKLN 1145 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 +T +++ ++ LS + R LG +N++ + L++ ++ +S Sbjct: 1146 EAIVTRDYVQ--ISRLVDSLDTDLSRLSFSRGELGARSQNVDLMKTRLEDDMVELNANLS 1203 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I V+ A + + + S ++ +LS+L+Y+ Sbjct: 1204 TEIEVDFVKAASDFAAQQASYQASLQTIGQIYQLSLLDYI 1243 >gi|311070046|ref|YP_003974969.1| flagellar hook-associated protein FlgL [Bacillus atrophaeus 1942] gi|310870563|gb|ADP34038.1| flagellar hook-associated protein FlgL [Bacillus atrophaeus 1942] Length = 298 Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 42/346 (12%), Positives = 103/346 (29%), Gaps = 58/346 (16%) Query: 12 FERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSL 71 + KL ++ +G+ L++ + + + + + S Sbjct: 10 QNSLRY-IGSSYAKLDKLQSQVSSGKKISKASDDPIVAMKSLKYNTQLSQVKQYQSNASQ 68 Query: 72 VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT 131 L ++ +++ ++ + +V G+ + + E + AN Sbjct: 69 AFTWLENTETNITEGIDVLSKVRDLVVKAKNGQNGEAELKSIGVEVNQLKEQLLNIANTQ 128 Query: 132 DEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQ 191 G+Y+F+G NS P+ + D + S+M + Sbjct: 129 VNGRYIFNGTNSDSPPVVDNGDGTYTISDADDVNVN----------------ISSNMTLK 172 Query: 192 QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAV 251 + D A ++AS N+ + E S +V+ Sbjct: 173 ------------VNSDPKSAFGGTSASGQNVFEMLDSLENALNSGSVDD----------- 209 Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 L L+D + Q G+ +R+ +G + L+ + Sbjct: 210 -----LKSTLSD-------------IDQFTDGMSAERSDIGARYNRLELINTRLETQEET 251 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S + VE + + + K+ + +++++L Sbjct: 252 ATKVLSDNEDVELEKVITDFIAQASVHRAALAVNAKIVQPTLIDFL 297 >gi|317177111|dbj|BAJ54900.1| flagellar hook-associated protein FlgL [Helicobacter pylori F16] Length = 826 Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSGINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMETFKTKLIQSANDVHSETSRTAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 >gi|285018202|ref|YP_003375913.1| flagellin and related hook-associated proteins (hook-filament junction protein) [Xanthomonas albilineans GPE PC73] gi|283473420|emb|CBA15925.1| probable flagellin and related hook-associated proteins (hook-filament junction protein) [Xanthomonas albilineans] Length = 401 Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 57/402 (14%), Positives = 124/402 (30%), Gaps = 52/402 (12%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQ 57 +T IS+ I+ + + L +++ TGQ +D + G + ++ Sbjct: 1 MSTRISSGMIYNQSLNTMLDKQGRIAHLQQQLSTGQRLVTAADDPVAFGT----AVTMDR 56 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 +A+ + ++V RL+ + LS ++ + V G + + A L Sbjct: 57 ADAALAQFGQNANIVQNRLNLQENALSQAGSLMARVNDLTVEANSGALNTSNRQAIASEL 116 Query: 118 RDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKD--------SLAKKSFDQMLQG 168 + ++S ++ +N TD G+YLF G P + + + D + Sbjct: 117 KTLHDSLLSLSNSTDGSGRYLFGGTADGNPPFTVVGGQAVYNGNQTQRSVEVAPDTKVSD 176 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNAS---------- 218 L + + +A L D D N S+ S Sbjct: 177 TLPGSEIFMRVRTGDGSVDAHAGGSNTGTGLLLDFSRDGSSPGWNGSSYSVVFTDPNTYQ 236 Query: 219 -------------------------DHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIG 253 + ++ + + + N I + + Sbjct: 237 VKDSSGTVINTGTYTAGDTLNFAGLNMHLDGAPAAGDSFQIGPSTNKDVFSTINDLVNVL 296 Query: 254 TEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 A + + + Q S I RA G I+ + + Sbjct: 297 NTDPVTPTGKAALQNALQSSMRDISQATSKISAARASGGAQLAAIDNASDLRSANDVSLK 356 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 T +S ++ A ++ + ++ + I T++Q +S+ N Sbjct: 357 TSLSSVRDLDYADAISKYQLEQSALKAAQTIFTQMQSMSLFN 398 >gi|317181639|dbj|BAJ59423.1| flagellar hook-associated protein FlgL [Helicobacter pylori F57] Length = 828 Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSGINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMETFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 >gi|54308104|ref|YP_129124.1| flagellar hook-associated protein FlgL [Photobacterium profundum SS9] gi|46912530|emb|CAG19322.1| hypothetical flagellar hook-associated protein FlgL [Photobacterium profundum SS9] Length = 396 Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 49/396 (12%), Positives = 141/396 (35%), Gaps = 58/396 (14%) Query: 9 SSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSIL---EWEQEKNHIAER 65 +++ MN ++ ++ +++ +G+ L G + + ++Q+ I + Sbjct: 12 NAVSNDMNRQQIKVQEN----QQQLASGKRL---LTAGDDPVASIYIQNFDQQNTQIDQS 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S ++ RL+ +A ++ ++ ++ D ++++ G ++ + ++ ++SF+ Sbjct: 65 VKSITMARNRLNNEEAAITEVENLLDDAKRKSMMMVNGSLSSDDRVAHKQDMQGIFDSFM 124 Query: 126 TFANMTD-EGQYLFSGINSSEKPL------------NGYF-------TKDSLAKKSFDQM 165 N D G Y+F+G S++P + Y + D + D++ Sbjct: 125 NLVNSRDESGNYVFAGTQYSQQPFFRDNNGDVAYVGDSYQRMAKIAPSVDVPINDAGDKL 184 Query: 166 LQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKF---SDDEYWANNWSNASDHNI 222 S + Q + + ++ + ++ D + Sbjct: 185 FLEVANPFGDYQPDYALESGSLLLLSQAKNGNDADQSEYRVDFSTSSGSTSYELYQDGAL 244 Query: 223 KY---------------------RIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNL 261 IK+ + I ++ N+ G ++ Sbjct: 245 VSTAPFDPHKGIQWNTLQIDLKGEIKNGDSIALNRQENVSVFDAFKR----GINLSDSDV 300 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 +D + ++ + QG I R+ +G + ++ + Q+ +++ Sbjct: 301 SDASATAELHQVAEELAQGFKHINRARSEVGTRLQTLDRQEDMHQDFKIVMNEARGTLED 360 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ TA +L+ + ++ S K + L++ NY+ Sbjct: 361 LDYATAVIELNQNMMALQASQQAFAKTKDLNLFNYI 396 >gi|308175272|ref|YP_003921977.1| flagellar hook-filament junction [Bacillus amyloliquefaciens DSM 7] gi|307608136|emb|CBI44507.1| flagellar hook-filament junction [Bacillus amyloliquefaciens DSM 7] gi|328555245|gb|AEB25737.1| flagellar hook-associated protein FlgL [Bacillus amyloliquefaciens TA208] gi|328913606|gb|AEB65202.1| flagellar hook-filament junction [Bacillus amyloliquefaciens LL3] Length = 305 Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 101/341 (29%), Gaps = 68/341 (19%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 +L +++ TG+ +++ + + + + S L S++ ++S Sbjct: 23 LDRLQQQVSTGKKITKASDDPVVAMKGMQYRTQLAQVNQYQRNVSQGFTWLENSESSVNS 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 I+ + +V + + + V+ AN G+YLF+G NS Sbjct: 83 ETDIMGKIRDLMVQAKSDSNGETELKAIGTEIGQLKKQLVSVANTQVNGRYLFNGTNSDV 142 Query: 146 KPLN---------GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDF 196 P+ Y S + + + L+ NS A + N + +F Sbjct: 143 PPITENADGTYTYNYENYTSASDVNINISNGAVLKVNSDPNSAFGGVAQ---NGDNVFEF 199 Query: 197 IKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF 256 + LE S S A I I G D M Sbjct: 200 LNSLEASLSKGTL-----SEADSKQILSDI--------------DGFTDKM--------- 231 Query: 257 LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYI 316 +++ +G + + L+++ + + Sbjct: 232 ----------------------------NAEKSNIGARTNRLELIQTRLESQAATAEKVL 263 Query: 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S + VE + + + + + + S++++L Sbjct: 264 SDNEDVEMEDVIVDYLSQQTVHKAALSVNANIIQPSLIDFL 304 >gi|167770234|ref|ZP_02442287.1| hypothetical protein ANACOL_01577 [Anaerotruncus colihominis DSM 17241] gi|167667556|gb|EDS11686.1| hypothetical protein ANACOL_01577 [Anaerotruncus colihominis DSM 17241] Length = 358 Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 100/360 (27%), Gaps = 35/360 (9%) Query: 15 MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 +N + + K + + SD + G R + ++ + N++ Sbjct: 16 LNTVMTKRASTMEKGQSGLAFNRLSD-NVAAGVRA-----MKVQEERLTSERQLNTIENF 69 Query: 75 R--LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD 132 R T +L S+ I+ + L G + + A + + + FAN Sbjct: 70 REEFKTIDTNLDSIDSILVSARDKVEKALNGTNGGDPREVIAKEIGSLKKQILQFANSQY 129 Query: 133 EGQYLFSGINSSEKPLNGYFTK--------------DSLAKKSFDQMLQGFLEENSKSLL 178 G++LF G N++E P T D + + ++ Sbjct: 130 AGKFLFGGTNNAEAPFTDDGTGKLCFNGIPVEDIRYDEARQTYYYVAPGTKPPNDTYDDR 189 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEG-IDVSAN 237 AG ++ + N+ + + + + + + Sbjct: 190 AGIVPGSENIYVDIGLGLKVNDNSSIDPRSAFQTNF----NGLLVLGFGPSVTGANGTES 245 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 N I +E + + + + R LG Sbjct: 246 PNS--------AYDIMSELEKVLADPDFDQDKAGDLFDHFETVIDDMRFSRVDLGTRMNF 297 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ ++N + T + I + L + T L S+L++L Sbjct: 298 LDRSADRMENDIVNLTTTETNLISADPFDTAIDLKQCEYTWMAVLQLGTMLLPTSLLDFL 357 >gi|91976148|ref|YP_568807.1| hypothetical protein RPD_1669 [Rhodopseudomonas palustris BisB5] gi|91682604|gb|ABE38906.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 535 Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 52/138 (37%), Gaps = 5/138 (3%) Query: 225 RIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLT---DGARNVLTKKMLSTVQQ-- 279 R+ D+ + A + + +R + + + L +++ + + Sbjct: 398 RVDDSITVQYGARADEQALRKQLQTVAVFAAVTTSATDPYGSDKMAALNQRVAANLATEP 457 Query: 280 GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIE 339 G I +A L S+ + + + T + GV +L L ++ Sbjct: 458 GQQSIQNIQADLAGSQAAMKATKDRQTQTKALAQTMLDSIEGVNNDEVATKLLALQTSLQ 517 Query: 340 MSYMITTKLQKLSILNYL 357 SY +T++L ++S++ +L Sbjct: 518 ASYQVTSQLYQMSLVKFL 535 Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 60/190 (31%), Gaps = 7/190 (3%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 L L +++ +G+ S G T + ++ +I+ + + R+ Sbjct: 17 ILNLRSQLDNLSQQLSSGRISSTYAGDGTGRTLAIGMREQLANISSYSDTMVNINTRIGV 76 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 + L + I ++ G + + P D ++S V N +YLF Sbjct: 77 ANLSLQRLNAIGSEVKGAAASAGSTLDNTGQTPGQKTAGLDFFDS-VDMLNAQTGDRYLF 135 Query: 139 SGINSSEKPLNGYF---TKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT- 194 SG + P+ + Q++ + + + G+ + + + Sbjct: 136 SGRATDTAPVTAADQIMNGNGAGIAGLKQVVSERHDADVGTNGMGRTIISAGATPTSVQI 195 Query: 195 --DFIKQLED 202 DF Sbjct: 196 GEDFAANPFA 205 >gi|317179308|dbj|BAJ57096.1| flagellar hook-associated protein FlgL [Helicobacter pylori F30] Length = 828 Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSGINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMETFKTKLIQSANDMHSETSRTAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 >gi|317180101|dbj|BAJ57887.1| flagellar hook-associated protein FlgL [Helicobacter pylori F32] Length = 828 Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSGINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMETFKTKLIQSANDMHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 Score = 36.2 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 89/265 (33%), Gaps = 26/265 (9%) Query: 102 EGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKS 161 D N R ++ N + N+ + + + +K+S Sbjct: 581 PTSADIQASKPNEVTYRQLMDAMSIALNYS----------NTD-PAIYQQISDNPTSKES 629 Query: 162 FDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEY-WANNWSNASDH 220 D G L++ +L + E + M K F D ++ N ++ Sbjct: 630 KD-RFIGLLKQAKANLSVNLNEEGKVIIQDNMHSNTKMQFMLFDKDANDFSQNALHSDKP 688 Query: 221 NIKYRIKDTEGIDV-SANVNMR------GIRD-IMFVAVIGTEFLSKNLTDGARNVLTKK 272 ++K + ID S N + +R I +G + S G +N +T Sbjct: 689 SLKLNANNALIIDKPSVNFFDQLENIITSVRKGIYRPDALGDTYSSDMRNLGIQNGIT-- 746 Query: 273 MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLS 332 ++ + + +I + G + +NI L+ + I ++ G + + + S Sbjct: 747 LIDHLSDHIEKMIAKNGTHGKAFENIIRRNEVLKTQVQSIRG---ETTGTDMAETYNKFS 803 Query: 333 TLINKIEMSYMITTKLQKLSILNYL 357 L N T K+ LS+ YL Sbjct: 804 NLANNYNAVLASTNKINNLSLTKYL 828 >gi|85715031|ref|ZP_01046016.1| hypothetical protein NB311A_11682 [Nitrobacter sp. Nb-311A] gi|85698228|gb|EAQ36100.1| hypothetical protein NB311A_11682 [Nitrobacter sp. Nb-311A] Length = 501 Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 65/210 (30%), Gaps = 7/210 (3%) Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNW 214 S+ K + ++ ++ V + + +D W Sbjct: 292 SSIGKLANTSLVAASAVRATRDFFDQPPQRVDLTPPATLATATAAVNGTVADTVQWYTGD 351 Query: 215 SNASDHNIKY--RIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARN---VL 269 A R+ + + + IR +M + + A + L Sbjct: 352 DGAGSARATSVVRVDSSVTVQYGMRASEDAIRSLMESVAVLAAVTTSPTDPNAADQISAL 411 Query: 270 TKKMLS--TVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 ++ TV G I + + L ++ + + + + I ++ V Sbjct: 412 NSRVAQNLTVAPGSQTIGDIQVDLANAQTVMKDATARQKLTQATMQNIIDQAENVSTDEV 471 Query: 328 HAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +QL L ++ SY T L +LS++ +L Sbjct: 472 ASQLLALQTDLQASYQTTAMLSQLSLVKFL 501 Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 43/133 (32%), Gaps = 1/133 (0%) Query: 18 LTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLS 77 + L L ++ +G+ + +GA + + ++IA + + + Sbjct: 16 SIRNLKAQMADLQGQLTSGKRATTYSGMGANEGFAIAARAQLSNIAAYTDTMMKINTNIG 75 Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 + L ++ I + + + + + S V N +Y+ Sbjct: 76 VANTALQALSDIGTQLQNAAISGSQTLNSMGQ-TAGQQTAVAEFSSMVGILNTQAGDRYI 134 Query: 138 FSGINSSEKPLNG 150 FSG +P+ Sbjct: 135 FSGSTIYTQPVAS 147 >gi|317121044|ref|YP_004101047.1| flagellar hook-associated protein 3 [Thermaerobacter marianensis DSM 12885] gi|315591024|gb|ADU50320.1| flagellar hook-associated protein 3 [Thermaerobacter marianensis DSM 12885] Length = 295 Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 32/342 (9%), Positives = 88/342 (25%), Gaps = 66/342 (19%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 + + + +G+ L + + L Sbjct: 16 LRRAQERLSTYQNRLASGKQVQRPSDDPVATVDSLRLRARLAEVDRLRANAEDARDWLEI 75 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 + + L +I+Q + G ++ A ++ + + AN T Y+F Sbjct: 76 TDSALDRATQILQRARELAIRAASGTLPDSSLDAIAAEVQQLRDHLLEVANTTLGDAYIF 135 Query: 139 SGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 G+ + + P Y + A Q + G Sbjct: 136 GGLATQQPP---YVADPASATGVAYQGING------------------------------ 162 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSAN---VNMRGIRDIMFVAVIGTE 255 ++ + + V+ + + Sbjct: 163 ----------------------PVEREVAPGTTVAVNVPGDAAFDPAFDALGQ---MAAA 197 Query: 256 FLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 +++L + +++ + + G++ RA +G I L + Sbjct: 198 LAARDLP-----TVGGAVVAALDDAIDGLLRFRAEVGAKVNRIELGLYRLDEIRIDTERL 252 Query: 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S + +LS + M ++ + +++++L Sbjct: 253 LSGVEDADIAETAMRLSVSEAAYRAALMAGARIVQPTLMDFL 294 >gi|20807000|ref|NP_622171.1| flagellar hook-associated protein FlgL [Thermoanaerobacter tengcongensis MB4] gi|20515483|gb|AAM23775.1| Flagellin and related hook-associated proteins [Thermoanaerobacter tengcongensis MB4] Length = 296 Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 93/332 (28%), Gaps = 59/332 (17%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 K + +G+ V + L + + + L + + LS Sbjct: 23 LQKGQNMLSSGKKFTRPSDDPVAVATSLRIKTDMARNDAYTKNADDAKSWLEITDSALSQ 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 + ++Q V G + A + V N G+Y+F+G + Sbjct: 83 LGDLLQRTRELAVEGANGTLTQSDMEKIAQEIMQLKAQMVQVGNTQYNGRYIFAGFKTDT 142 Query: 146 KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFS 205 P + + S D F + +A + + Sbjct: 143 APFSE-----TANSYSGDDNFIEFEVGPGGNKMA-----------------VNVPGSRLF 180 Query: 206 DDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGA 265 D R+ + + L L +G Sbjct: 181 DVVG------------GTSRL------------------------LQMMDDLKSALENGD 204 Query: 266 RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 ++ M++ + + L ++ RA +G I+ + LQN N +SK+ + Sbjct: 205 HQAVSS-MIADIDKQLENVLSVRAEVGAKSNRIDLIQNRLQNDNYNFTALLSKNEDADMA 263 Query: 326 TAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L N S ++ + S++++L Sbjct: 264 EVITNLKMDENVYRASLAAGARIIQPSLIDFL 295 >gi|108562722|ref|YP_627038.1| flagellar hook-associated protein FlgL [Helicobacter pylori HPAG1] gi|107836495|gb|ABF84364.1| putative flagellar-hook associated protein 3 [Helicobacter pylori HPAG1] Length = 828 Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAKNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 Score = 36.6 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI---SEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + I + A G + +NI L+ + I Sbjct: 728 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGSHGKAFENIIRRNEVLKTQVQSIR 787 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 788 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 828 >gi|149173750|ref|ZP_01852379.1| probable flagellar hook-associated protein 3 [Planctomyces maris DSM 8797] gi|148847280|gb|EDL61614.1| probable flagellar hook-associated protein 3 [Planctomyces maris DSM 8797] Length = 753 Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 51/141 (36%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 ++ + R+ + + + KL +++ TGQ + + + + Sbjct: 13 STMLSNRLKVSLNDNALELAKLQQQVSTGQKYSLASESPGAALRTIILQSTFERQQQYQS 72 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 + + L+ S+ LSS+ + + + + + + A + + Sbjct: 73 NINTSMSILAMSETSLSSVGDALNSAKAISLSGVGSTSSDAERVALADQIASLRTQVINA 132 Query: 128 ANMTDEGQYLFSGINSSEKPL 148 N T GQYLFSG ++ P Sbjct: 133 GNTTFRGQYLFSGSQTNVAPF 153 Score = 36.2 bits (82), Expect = 8.1, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 36/88 (40%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 ++ + ++ + R +G + E L+++ I IS+ + Sbjct: 666 IGRIGGLLDTEIARLNRVRGDIGSRMSVLEEADNRLKDQEVKIQESISQDFDTDLTQILV 725 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 +++ E + +T+ +L++L+YL Sbjct: 726 EITQRQTAFEANLQVTSSALQLTLLSYL 753 >gi|332305622|ref|YP_004433473.1| flagellar hook-associated protein 3 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172951|gb|AEE22205.1| flagellar hook-associated protein 3 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 408 Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 52/410 (12%), Positives = 123/410 (30%), Gaps = 63/410 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST +++R + D + +++ TG+ ++ +E + I + Sbjct: 3 ISTGQLYDRSIRAVLDNQDDLSDVQQQLSTGKKLLRPSDDPVGSAQVIRLTEEIDLINQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 +N+L+T + + L ++ +Q ++ G D + A + + Sbjct: 63 NKNNNLLTNSIEQEETILGNVTDNIQRARQLMIQAGNGILDVDDRKAIAIEIGQIRDQIF 122 Query: 126 TFANM-TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFD--------------------- 163 N + G+Y+F+G S+ Y S K +F+ Sbjct: 123 DAMNSQSANGEYIFAGYQSATPAF-SYTAGASGNKYAFEGDEGLNEIRISNTFSLAMNNS 181 Query: 164 --QMLQGFLEENSKSLLAGQHLEVSSM---NAQQMTDFIKQLEDKFSDDEYWANNWSNAS 218 + + + + + +S + F Q D +A+ Sbjct: 182 GQTVFEDVYARLDSQITSSSGVASASTRISTQNEFDQFHSQNYDPVVAANNEFQISISAA 241 Query: 219 DHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVI-------------------------- 252 + + + ++ I Sbjct: 242 EQVTITNVGTGAVVGTQPFISGEPFEFKGQEFTIEGVVGDTVNYALQKPEKKNIAETLND 301 Query: 253 -GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLG----ISEKNINEERVFLQN 307 +N++D L V L+ I + ++LG +++ + + L+ Sbjct: 302 FYNSLNDENISDQDYAQAISDALIGVDNSLTSIADSISLLGGKLNVAQS-VFASNLDLEI 360 Query: 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 N I V+ A ++LS ++ + K+ LS+ +Y+ Sbjct: 361 SNKTARANI---EEVDYAEAVSELSKQEAALQAAQATFAKVTGLSLFDYI 407 >gi|255654321|ref|ZP_05399730.1| flagellar hook-associated protein [Clostridium difficile QCD-23m63] gi|296452610|ref|ZP_06894304.1| flagellar hook-associated protein 3 [Clostridium difficile NAP08] gi|296880978|ref|ZP_06904924.1| flagellar hook-associated protein 3 [Clostridium difficile NAP07] gi|296258571|gb|EFH05472.1| flagellar hook-associated protein 3 [Clostridium difficile NAP08] gi|296427999|gb|EFH13900.1| flagellar hook-associated protein 3 [Clostridium difficile NAP07] Length = 310 Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 116/352 (32%), Gaps = 44/352 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST + ++ + K++ ++ T + + + IL + E + Sbjct: 3 VSTGMMSSSYLNSLQDNLQRLDKVNRQVNTTKEINKLSDNPYKAIKILNSKSEIKTMEIY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L T+ L + K++ D+ LV +G +++ + + + Sbjct: 63 VENCKDTGNWLETTDTALDQLGKLLSDIKKTLVASGDGAYSDDELKTLSNETNEKIKEIA 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N T EG+Y+FSG N+ P+ D F+ + ++S S+ Q + V Sbjct: 123 NALNATHEGKYIFSGSNTGIPPVECVDNADGSVSLKFNSSIDLNKLKDSLSMDVAQGISV 182 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 N + + + ++ NI ++ N Sbjct: 183 -DYNVKLSSLGFDPTKTDPFEELN-----------NISKKL-----------ANPDA--- 216 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 A LT L ++Q + + R++ G + + Sbjct: 217 ------------------DAIKELTTTCLGEMEQLIENTVNVRSIYGTKANTVEAMKEKN 258 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +S++ ++ QL + S KL +SIL+Y+ Sbjct: 259 DDSLIQLKEILSQNEEIDYGEKLVQLKAAELTYQASLQTGGKLFSVSILDYI 310 >gi|316932792|ref|YP_004107774.1| hypothetical protein Rpdx1_1419 [Rhodopseudomonas palustris DX-1] gi|315600506|gb|ADU43041.1| hypothetical protein Rpdx1_1419 [Rhodopseudomonas palustris DX-1] Length = 535 Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 68/192 (35%), Gaps = 7/192 (3%) Query: 17 ILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRL 76 L L +++ +G+ S+ +G + + + +IA + + +T R+ Sbjct: 15 TGILNLRSQLETLTQQLSSGRISNDYAGVGTGRSLAIGLRAQMANIASYSDTMTNITTRI 74 Query: 77 STSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQY 136 S + L M +I ++ G V + + P D ++S V N +Y Sbjct: 75 SVANLSLQRMAEISSEVKGAAVSAGSTLDNTGQTPGQRTAALDFFDS-VDMLNAQVGDRY 133 Query: 137 LFSGINSSEKPLNGYF---TKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQM 193 LF G + P+ D A Q+++ + + + G+ + + A + Sbjct: 134 LFGGRVTDTAPVTAADKIMDGDGAAIAGLKQVVRERHDADVGTDGMGRTIVSAGATATAV 193 Query: 194 T---DFIKQLED 202 DF Sbjct: 194 QIGEDFAANPYA 205 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 69/210 (32%), Gaps = 10/210 (4%) Query: 153 TKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN 212 LA S + F +AG ++ + Q+ ++ + + Sbjct: 331 ANGPLAAASAIKAGDDFFSNTPPLRVAGTAPFGAATS--QVAGTKANTIFWYNGEP---D 385 Query: 213 NWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTK- 271 + S+ + +I D + A + + +R + + + + + Sbjct: 386 SASDPARGTAVAKIDDAITVQYGARADEQALRKQLQTVAVFAAVTTSATDPYSSGKIAGL 445 Query: 272 ----KMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 V G I +A L ++ +I + T +S G+ Sbjct: 446 NQRVAANLAVVPGEQSIQNMQAELAGAQASIKATSNRQVQGKALAQTMLSSIEGINNDEV 505 Query: 328 HAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ L ++ SY T++L +LS++ +L Sbjct: 506 ATKILALQTALQASYQTTSQLYQLSLVKFL 535 >gi|134095090|ref|YP_001100165.1| putative flagellar hook-associated protein 3 [Herminiimonas arsenicoxydans] gi|133738993|emb|CAL62041.1| putative flagellar hook-associated protein 3 FlgL-like [Herminiimonas arsenicoxydans] Length = 403 Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 57/400 (14%), Positives = 123/400 (30%), Gaps = 48/400 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST++IFE + +L +K +++ T + + L EQ + + Sbjct: 3 ISTNTIFEMGSGKIGDLQAAMLKTQQQISTNRRILAPSDDPVAAAAALGMEQAISINDQL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS ++ L S+ ++Q + ++ G D+ + + A LR +++ + Sbjct: 63 ATNRLSAKAALSEEESILQSVTLLLQSVKDIVISAGNGALDDVQRQMFATQLRGNFDELM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL------NGYFTKDS------------LAKKSFDQML 166 AN D G Y+F G SS P Y + S + Sbjct: 123 GLANTRDSNGNYIFGGFQSSSPPFMQSATGADYTGDQGQRMLQVGPARQLASGDSGSAVF 182 Query: 167 QGFLEENSKSLLA-------------GQHLEVSSMNAQQMT------------DFIKQLE 201 +G + N + + A G +++ + ++ Sbjct: 183 EGGVTGNGRFVTAAGLGNTGTGIVSMGSVSDLTQLTGLAYDVTFSVDAITGETTYLVNEP 242 Query: 202 DKFSDDEYWANNWSNASDHNIKYRI----KDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 + + +++ I D + V + N I + + Sbjct: 243 PPATPTPQLYVSGDPIEIGGMRFDIKGKPADGDTFSVKPSTNQSVFTTITDLLTTLSTSA 302 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 + + L I R +G K I+ + +S Sbjct: 303 VGPTGQTRLANGLASANTNIANVLDNISTVRTSVGARLKEIDNLDSAGADLKLQYTKTLS 362 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A+++ + +E + K+ LS+ N L Sbjct: 363 DLQDIDPVEAYSRFTQQQFTLEAARQSFIKISGLSLFNML 402 >gi|307699994|ref|ZP_07637045.1| flagellar hook-associated protein 3 [Mobiluncus mulieris FB024-16] gi|307615032|gb|EFN94250.1| flagellar hook-associated protein 3 [Mobiluncus mulieris FB024-16] Length = 336 Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 128/359 (35%), Gaps = 27/359 (7%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ++TS + + + +E+M +G+ + A S + +E Sbjct: 1 MITRVTTSMMANDTLANVQNNFQRLADANEKMASGKRMKFASDDPASSVSSMRLRKELAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + + T+ + + ++ K+ L+ + G A LR + Sbjct: 61 TEQYKRNIDDAQSWMQTADSAMDTVSKLYLHSKTKLINSVSGAMGKESLHALAADLRQNA 120 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 ++ +T AN T G+ +F+G +S F +++ L Sbjct: 121 QAIMTQANKTYLGRTVFAG--------------NSDKGVVFKT------GKDANGDLQFM 160 Query: 182 HLEVSSMNAQQMTDFI---KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 E ++ A + I L ++ + + I + +G V + Sbjct: 161 QTEADNVTAMPVDRRINAYTTLPANVDGNKLFGTGTIRYVEGPINEQTGLPDGFAVDDSN 220 Query: 239 NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 N + ++ A I E G + + ++ LS ++ + ++ LG K + Sbjct: 221 NPSVMNLLVEAARIM-ETGDLGGEKGEKILAIQRELSRREKL---LHTNQSDLGARHKQV 276 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 E + + + + T IS V+ +A ++S + + T+++ + S+L+YL Sbjct: 277 LEAQDNVVSDIQAVKTQISGVEDVDIQSATIEMSLAHMAYQAALGSTSRVVQPSLLDYL 335 >gi|17548573|ref|NP_521913.1| flagellar hook-associated protein 3 [Ralstonia solanacearum GMI1000] gi|17430821|emb|CAD17503.1| probable flagellar hook-associated protein 3 [Ralstonia solanacearum GMI1000] Length = 316 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 120/353 (33%), Gaps = 42/353 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ F + + VKL +++ TG + + A + +L+ +Q ++ + Sbjct: 3 VSTAQFFSASTSSMQTTQSNLVKLQQQISTGIALNAAGDNPAAMGQVLQLQQSQDTNDQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + RL+T + LS + +Q + +++ ++ Y+ + Sbjct: 63 QVNRDATNARLNTVSSALSDVIATLQQGKQSTIAANTTLLTDSQRVGILAQVKQQYQQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN D G LF+G N + P F+ G Sbjct: 123 STANQRDASGVALFAGANGTTAP---------------------FVSSGGSVQYVGSGQP 161 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + AQ + + ++ S ++ R+ +++ + N N + Sbjct: 162 PTVQVAQDI------------------SMPNSVSGDSVFVRVPNSDV--SNPNANQSVFK 201 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + ++ ++ + A + + ++ + +G + I Sbjct: 202 TYENLITALSKPITTSADVTAIQTAVQTAQGNLDSAYQVALQAQVTVGTQQAQITTLNSS 261 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 N + ISK V+ +A +Q S ++ + + +Q LS+ Y+ Sbjct: 262 GSNFGEQLKEQISKLQSVDYTSAISQFSQQQVSLQAAQKTFSAMQGLSLFQYI 314 >gi|262276409|ref|ZP_06054218.1| flagellar hook-associated protein FlgL [Grimontia hollisae CIP 101886] gi|262220217|gb|EEY71533.1| flagellar hook-associated protein FlgL [Grimontia hollisae CIP 101886] Length = 397 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 50/400 (12%), Positives = 134/400 (33%), Gaps = 47/400 (11%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSIL---EWEQE 58 + I++ ++ ++ +E+ TG+ L G S + + Q+ Sbjct: 1 MISRIASFHNYQSVSNDLMRQQVKLQDNQDELATGKRV---LTAGDDPVSSIYIQNFRQQ 57 Query: 59 KNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLR 118 + + + S +L R + ++ + +++V + ++ G + + L+ Sbjct: 58 DKQLDQYVDSITLARNRQTRAEIAIDDAEQLVDSAKRKTMEMINGSLSEDDRTAHRQDLK 117 Query: 119 DSYESFVTFANMTD-EGQYLFSGINSSEKP------LNGYFTKDSLAKKSFDQMLQGFLE 171 Y++F+ N D G +LFSG SS++P LN + DS + + Sbjct: 118 GLYDNFMNLVNAKDESGNFLFSGTQSSKQPFYRDGALNVRYAGDSYHRTAQVAPAVEVQT 177 Query: 172 ENSKS-------LLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY 224 + G + +N+ + + +D+ +A +++ Y Sbjct: 178 SDPGDEVFMTIKNPFGDYQPEYELNSGSLLLLAQAKNSNNTDNAEYAVSFTVDGAGQTTY 237 Query: 225 RIKDTEGIDVSANVNMR----------GIRDIMF-----------------VAVIGTEFL 257 + + S + + M G E Sbjct: 238 ELTQDGNVVSSGVYDPQTGVQWGTLSLSFEGEMLDGDRIVLERQDTFNVFDAFKKGIELS 297 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 +++ D + ++ + + R+ +G ++ + ++ +++ + Sbjct: 298 YESIFDASATAELHQVTEQFSAAFKHLNKARSEVGTRLTTLDRQESMHKDFKLVLNRSLG 357 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ TA ++ + ++ S K + LS+ NY+ Sbjct: 358 TMEDLDYSTAVIDMNENMLALQASQQAFAKTKDLSLFNYI 397 >gi|119503651|ref|ZP_01625734.1| Flagellin-like protein [marine gamma proteobacterium HTCC2080] gi|119460713|gb|EAW41805.1| Flagellin-like protein [marine gamma proteobacterium HTCC2080] Length = 402 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 53/400 (13%), Positives = 119/400 (29%), Gaps = 50/400 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +S++ ++ E ++ E++ +G+ I+ E N + Sbjct: 5 VSSNQVYRTGIGSILEAQSKLSRIQEQVASGKRIQNPSDDPGAAAEIVRLRSELNRVETY 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDSYESF 124 + LS ++ ++ + ++Q V +G + + I A + +S Sbjct: 65 QRTADQAISSLSFEESAVAGAESVLQRARELAVQGANDGALNASDREIIAAEIDGLRDSL 124 Query: 125 VTFANM-TDEGQYLFSGINSSEKPLNGYFTK--------------DSLAKKSFDQMLQGF 169 + N +G+Y+F+G + + S + + Sbjct: 125 LNIGNTRNADGEYIFAGDKVNTAAFSESNGAVTYEGSGGPRLVNIASGIRLQTNDTGATV 184 Query: 170 LEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDH---NIKYRI 226 + + + S + + F E + +S+ I Sbjct: 185 FQGAAAGNGQFEVSATGSNTGTGVV-GATGFDGTFPGTENYTITFSSVGGQLKYAITGST 243 Query: 227 K-----------------------------DTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 + V+A + ++ Sbjct: 244 SGAIGAAQDYVSGEDITFAGATVKIEGAPEAGDTFAVTAGGTQSAFDTLTELSAALRTQG 303 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 S D R + L + L I + R LG ++E+ + N I++ IS Sbjct: 304 SAA-KDAQRATAVGQALQNIDASLGQINKVRTDLGARLNRVDEQISLNASFNFQIESTIS 362 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 K ++ TA +L+ + +E + K Q +S+ NYL Sbjct: 363 KLEDLDFATAVTELNLQLVALEAAQQTYIKTQGISLFNYL 402 >gi|144899351|emb|CAM76215.1| phase-1 flagellin [Magnetospirillum gryphiswaldense MSR-1] Length = 501 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 72/235 (30%), Gaps = 23/235 (9%) Query: 142 NSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS---SMNAQQMTDFIK 198 N + P S + Q+ ++ + ++ + + Sbjct: 270 NLTFTPGTDTIQVSSTTGFAVGQVFTVAGTTSNDGSYKVSSIAAGPPDTITVESVKVGAT 329 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLS 258 + E W + +I+ RI + + + + + Sbjct: 330 ETVAATLSSESW----YKGDNISIEQRIDQDRTVAIGIFASDPAFEKAFRAMGLIAQGNY 385 Query: 259 KNLT---------DGARNVLTKKMLSTVQQG-------LSGIIEQRAVLGISEKNINEER 302 + AR ++ ML S + R+ LG+++ I + Sbjct: 386 GTAGGLENNMERVEQARYLIRDSMLHPAGNSAPFGTEESSDLESVRSQLGVTQNLIKTKT 445 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 Q+ +D I V+++ A L +E Y +K++++S++N+L Sbjct: 446 EKHQSYIGFLDDRIISMENVDKNEAITLLLDDQRALEAGYQALSKVREMSLINFL 500 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 64/172 (37%), Gaps = 7/172 (4%) Query: 16 NILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKR 75 I + + L +VT + S + A ++ +E EK +++N+ + Sbjct: 16 RITAVQERVNMRTLQ--VVTEKKSPNYTGISADANRLINFENEKARSQAFINNNASLQTT 73 Query: 76 LSTSQAHLSSMQKIVQDMVGPLVILLEGKT-DNNKFPINAGMLRDSYESFVTFANMTDEG 134 + + L++++K ++ L K + S ++ + + +G Sbjct: 74 IGLADVSLTAVEKTMKTFRDRLETFYTNKNRTQQDIESIQTLAFQSMIDMQSYLSSSADG 133 Query: 135 QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS 186 +YLFSG S++P+ + +F + GF + A V+ Sbjct: 134 KYLFSGGLVSQEPVQ----LPAATHDAFKDIYDGFSVTYPTTRDAHMVDTVT 181 >gi|283784871|ref|YP_003364736.1| flagellar hook-associated protein 3 [Citrobacter rodentium ICC168] gi|282948325|emb|CBG87910.1| flagellar hook-associated protein 3 [Citrobacter rodentium ICC168] Length = 317 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 116/353 (32%), Gaps = 42/353 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++++ + ++ E+M +G+ + + Q + ++ Sbjct: 3 ISTQMMYQQNMRGITTSQAEWIRYGEQMSSGKRVVNPSDDPIAASQAVVLSQAQAQNSQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S ++ LS + +Q +V G ++ A L+ + + Sbjct: 63 ALARTFATQKVSLEESVLSEVTTAIQAAQEKIVNAGNGTLSDDDRASLATDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F+G + E P S +S Q + Sbjct: 123 NLANSTDGNGRYIFAGYKTGEAPFAQADGTYSGGTESITQ------------QVDSARTM 170 Query: 185 VSSMNAQQMTDFIK-QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 V ++ D I + + D+ N + +D + Sbjct: 171 VIGHTGDKIFDSITSNAVPEPNGDDSETNLF---------------RMLDSAIEA----- 210 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + + + + K ++ L+ ++ RA LG ++ Sbjct: 211 --------LNSPVGDDDALKEQAKAVIDKTNRGLKNSLNNVLGVRAELGTQLSELSSLDS 262 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 ++ +S + V+ + + ++ SY + +Q +S+ + Sbjct: 263 LGSDRALGQKQQMSDLVDVDWNEVISSYVMQQAALQASYKAFSDMQGMSLFQF 315 >gi|297538903|ref|YP_003674672.1| flagellar hook-associated protein 3 [Methylotenera sp. 301] gi|297258250|gb|ADI30095.1| flagellar hook-associated protein 3 [Methylotenera sp. 301] Length = 304 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 117/353 (33%), Gaps = 52/353 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST++I++ + D KL E++ TG+ LE ++ A+ Sbjct: 3 ISTNTIYQAGISRISNIQSDQAKLQEQISTGRRISSPSDDPVGAARALEISAAQSGNAKF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + +L+T +++L+S+ ++ LV + + A L+ S ++ + Sbjct: 63 ADTRQTAQLKLNTLESNLTSITSLLVSTQSTLVGAGNATLSDTERGFMASELKGSLDALI 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN D G YL++G +S P + + A S Q+LQ + G Sbjct: 123 GLANTQDASGNYLYAGYKTSTVPFVATASGANYAGDSNQQLLQVDTQRQMAINATG---- 178 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 +N A +++ + + + + N Sbjct: 179 ---------------------------DNVFQAGGNDVFATLSNLVTLLNTPITNAA--- 208 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + A N + +++ + ++ RA +G I+ Sbjct: 209 -----------------SQAAYNAGLSTAIGSLKGSVDNVLNVRADIGAKLNEIDNLDTA 251 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ +S + +A + L+ +E + ++ LS+ L Sbjct: 252 GSDRALQYSKSLSDLQDTDYASALSDLAKQQTIMEAAQKSFVQITSLSLFKLL 304 >gi|210134493|ref|YP_002300932.1| flagellar hook-associated protein FlgL [Helicobacter pylori P12] gi|210132461|gb|ACJ07452.1| flagellar-hook associated protein 3 [Helicobacter pylori P12] Length = 828 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMINVANTSIGGEFLFGGSKVDRPPIDS 147 >gi|109899395|ref|YP_662650.1| flagellar hook-associated protein FlgL [Pseudoalteromonas atlantica T6c] gi|109701676|gb|ABG41596.1| flagellar hook-associated protein 3 [Pseudoalteromonas atlantica T6c] Length = 408 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 56/410 (13%), Positives = 125/410 (30%), Gaps = 63/410 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST +++R + D + +++ TG+ ++ +E + IA+ Sbjct: 3 ISTGQLYDRSIRAVLDNQDDLSDVQQQLSTGKKLLRPSDDPVGSAQVIRLTEEIDLIAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 +N+L+T + + L ++ +Q ++ G D N + + + Sbjct: 63 NKNNNLLTNSIEQEETILGNVTDNIQRARQLMIQAGNGILDVNDRNAISIEIGQIRDQIF 122 Query: 126 TFANM-TDEGQYLFSGINSSEKPLNGYFTKDSLAK---------------KSFDQMLQGF 169 N + G+Y+F+G SS Y + K +F + Sbjct: 123 DAMNSQSANGEYIFAGYQSSTPAF-SYTAGAAGNKYVFEGDEGLNDIRISNTFSLAMNNS 181 Query: 170 LEENSKSLLAGQHLEVSSMNA-----------QQMTDFIKQLEDKFSDDEYWANNWSNAS 218 + + + A +++S + + F KQ D + Sbjct: 182 GQTVFEDVYARLDSQITSTSGVASASTRISAQSEFDQFHKQNYDPVTPANNEYQISITGV 241 Query: 219 DHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL--------------------- 257 D + + + I Sbjct: 242 DEVTITNVGTGTVVGTQPYTSGEPFEFQGQEFTIEGAVGDTVNYTLQKPEKKNIAETLND 301 Query: 258 ------SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLG----ISEKNINEERVFLQN 307 +N++DG L V L+ I + ++LG +++ + + L+ Sbjct: 302 FYNSLRDENISDGDYEQAISDALIGVDNSLTSIADSISLLGGKLNVAQS-VFASNLDLEI 360 Query: 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 N I V+ A ++LS ++ + K+ LS+ +Y+ Sbjct: 361 SNKTARANI---EEVDYAEAVSELSKQEAALQAAQATFAKVTGLSLFDYI 407 >gi|261837740|gb|ACX97506.1| flagellar-hook associated protein 3 [Helicobacter pylori 51] Length = 828 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSNINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMETFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 Score = 36.2 bits (82), Expect = 7.9, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI---SEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + I + A G + +NI L+ + I Sbjct: 728 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGSHGKAFENIIRRNEVLKTQVQSIR 787 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 788 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 828 >gi|308063157|gb|ADO05044.1| flagellar hook-associated protein FlgL [Helicobacter pylori Sat464] Length = 828 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSNINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMETFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 >gi|297379517|gb|ADI34404.1| Hypothetical protein HPV225_0313 [Helicobacter pylori v225d] Length = 826 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSNINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 Score = 36.2 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLST---VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + + +I + G + +NI L+ + I Sbjct: 726 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLKTQVQSIR 785 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 786 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 826 >gi|194015752|ref|ZP_03054368.1| flagellar hook-associated protein 3 [Bacillus pumilus ATCC 7061] gi|194013156|gb|EDW22722.1| flagellar hook-associated protein 3 [Bacillus pumilus ATCC 7061] Length = 303 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 43/347 (12%), Positives = 108/347 (31%), Gaps = 55/347 (15%) Query: 12 FERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSL 71 + + + K++E+ TG+ L++ + + + Sbjct: 10 QNSLRN-ISKSYEKLSKINEQAQTGRRFTKTSDDPVAAVKSLQYSTAMFRNDQYQKNLNE 68 Query: 72 VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT 131 + TS+ ++ + I+ ++ ++ G + + + N Sbjct: 69 AQNWIDTSETSVTEIIDIMSNVRDKVLDAANGTKQPEDLAAVGVEIGQMKKQIIDAMNTQ 128 Query: 132 DEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQ 191 G+++F+G N++ KP+ A +F + + + NS + + ++N+ Sbjct: 129 MLGKFVFNGTNTNVKPVVE------NADGTFTFNFENYTDANSVKSNISDGITL-NVNSN 181 Query: 192 QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEG-IDVSANVNMRGIRDIMFVA 250 ++ F AS N+ + D E + N Sbjct: 182 PISAF----------------GGQTASGQNVIEMLTDLENSLKNGTFANS---------- 215 Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 L ++ Q + +R+ LG ++ L ++ Sbjct: 216 --------------------DDALGSIDQFKEVMSAERSDLGARSNRVDLVGSRLTSQFE 255 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ S + VE A L + T K+ + S++++L Sbjct: 256 VLKNAKSDNEDVESEKAIIDLLQQETVNRAALATTAKVIQPSLVDFL 302 >gi|292487946|ref|YP_003530821.1| flagellar hook-associated protein 3 [Erwinia amylovora CFBP1430] gi|292899165|ref|YP_003538534.1| flagellar hook-associated protein 3 [Erwinia amylovora ATCC 49946] gi|291199013|emb|CBJ46124.1| flagellar hook-associated protein 3 [Erwinia amylovora ATCC 49946] gi|291553368|emb|CBA20413.1| Flagellar hook-associated protein 3 [Erwinia amylovora CFBP1430] gi|312172067|emb|CBX80324.1| Flagellar hook-associated protein 3 [Erwinia amylovora ATCC BAA-2158] Length = 321 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 52/349 (14%), Positives = 112/349 (32%), Gaps = 36/349 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST I+++ + N +K E+ TG + + Q ++ ++ Sbjct: 3 LSTGMIYDQQIQGIQTANSSWLKAGNELATGNRVNKPSDDPVAAAQAVVLSQAQSETSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + T+ ST + L + +V +V G + A L + Sbjct: 63 ETARVFATQNQSTEETTLKQVADVVISAQTTVVAASTGTLSDEDRASFATQLEGIRGQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y F+G S + P S A + Sbjct: 123 NLANSTDGNGRYTFAGYQSDKAPFT------SDAGGQITYIGGTIPITQKVDA---SRTL 173 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V++ +Q+ D + K D +N + IK Sbjct: 174 VTNHTGKQVFDSLTSDAVKEPDGAAGESNIFTILNTAIKS-------------------- 213 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + + T A K+ ++ L+ + R+ +G + + ++ Sbjct: 214 ------LKVSLTGADKATADAEGENMAKVNRGLRNVLNNVSSVRSEIGTNLQELSNLDSK 267 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + +S +G + A ++ + ++ SY + ++ KLS+ Sbjct: 268 GDDTTLSLKNQMSTLVGADTTEAISRYTMQQTALKASYTVFQQMSKLSL 316 >gi|261339383|ref|ZP_05967241.1| flagellar hook-associated protein 3 [Enterobacter cancerogenus ATCC 35316] gi|288318184|gb|EFC57122.1| flagellar hook-associated protein 3 [Enterobacter cancerogenus ATCC 35316] Length = 317 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 107/353 (30%), Gaps = 48/353 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++E+ + + E+M +G+ + + + Q ++ ++ Sbjct: 3 ISTQMMYEQNMRGITDSQSRWLGYGEQMSSGKRVNRPSDDPIAASQAVVLSQAQSQNSQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S + L + +Q +V G +N A L+ + + Sbjct: 63 ALARTFATQKVSLEENVLGQVTTAIQSAQEKIVYAGNGSLSDNDRASLATDLKGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 AN TD G+Y+F+G + P + Y + D + Sbjct: 123 NLANSTDGNGRYIFAGYKTDNVPFDQTNGDYSGGSEAISQQVDSARNMQISH-------- 174 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 ++ D D N D I TE + Sbjct: 175 --------TGSEVFDKFTSNAKPEPDGSTPETNLFKILDKAIDALNTPTESDQTKMDALT 226 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 I + + L ++ RA LG +++ Sbjct: 227 DSI---------------------------NQANRGLSNALDNVLTVRADLGTKLTELDK 259 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + A + + ++ SY + +Q +S+ Sbjct: 260 LDALGDDRALGQTQQMSDLVDVDWNAAISSYTMQQAALQASYKAFSDMQGMSL 312 >gi|308182470|ref|YP_003926597.1| flagellar hook-associated protein FlgL [Helicobacter pylori PeCan4] gi|308064655|gb|ADO06547.1| flagellar hook-associated protein FlgL [Helicobacter pylori PeCan4] Length = 828 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMINVANTSIGGEFLFGGSKVDRPPIDS 147 Score = 35.8 bits (81), Expect = 9.7, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 89/265 (33%), Gaps = 26/265 (9%) Query: 102 EGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKS 161 D N R ++ N + N+ + + + +K+S Sbjct: 581 PTSADIQASKPNEVTYRQLMDAMSIALNYS----------NTD-PAIYQQISDNPTSKES 629 Query: 162 FDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEY-WANNWSNASDH 220 D G L++ +L + E + M K F D ++ N ++ Sbjct: 630 KD-RFIGLLKQAKGNLSINLNEEGKVIIQDNMHSNTKMQFMLFDKDANDFSQNALHSDKP 688 Query: 221 NIKYRIKDTEGIDV-SANVNMR------GIRD-IMFVAVIGTEFLSKNLTDGARNVLTKK 272 ++K + ID S N + +R I +G + S G +N +T Sbjct: 689 SLKLNANNALIIDKPSVNFFDQLENIITSVRKGIYRPDALGDTYSSDMRNLGIQNGIT-- 746 Query: 273 MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLS 332 ++ + + +I + G + +NI L+ + I ++ G + + + S Sbjct: 747 LIDHLSDHVEKMIAKNGAHGKAFENIIRRNEVLKTQVQSIRG---ETTGTDMAETYNKFS 803 Query: 333 TLINKIEMSYMITTKLQKLSILNYL 357 L N T K+ LS+ YL Sbjct: 804 NLTNNYNAVLASTNKINNLSLTKYL 828 >gi|109947146|ref|YP_664374.1| flagellar hook-associated protein FlgL [Helicobacter acinonychis str. Sheeba] gi|109714367|emb|CAJ99375.1| flagellar hook-associated protein FlgL [Helicobacter acinonychis str. Sheeba] Length = 827 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNHYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLNQGIDVAQNAYTATLNTDKALQEFSKTMETFKTKLIQSANDVHSETSRTAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMINIANTSIGGEFLFGGSKVDRPPIDS 147 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLST---VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + + +I + G + +NI L+ + I Sbjct: 727 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGTHGKAFENIIRRNEVLKTQVQSIR 786 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 787 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 827 >gi|148258438|ref|YP_001243023.1| hypothetical protein BBta_7240 [Bradyrhizobium sp. BTAi1] gi|146410611|gb|ABQ39117.1| hypothetical protein BBta_7240 [Bradyrhizobium sp. BTAi1] Length = 588 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 76/211 (36%), Gaps = 13/211 (6%) Query: 152 FTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA 211 + LA S + Q F S LA + ++ S+ + + Sbjct: 385 ASDTVLAASSTVRATQDFFAGQSAPGLAARRIDFSAATPAYAQIASTSTVTWYRGEGS-- 442 Query: 212 NNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNL---TDGARNV 268 + A + + T + V A N +R + S + Sbjct: 443 ---TAAPREAVVVQASSTSALAVGARANEDALRSALAGFASVAASGSGTTTAASTERSKS 499 Query: 269 LTKKMLSTV--QQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHT 326 L + L+ + ++ + GI G+++ ++E + + I T + + Sbjct: 500 LASRALALLPTREAVDGITN---DFGLAQAALSEAQSENKAIRAIHRTQLDRLESAPAEA 556 Query: 327 AHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 A+L +L N+++ SY +T + KLS++NYL Sbjct: 557 VVAELVSLQNRLQASYQVTAMISKLSLVNYL 587 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 6/132 (4%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 L + +L ++ +G+ + +LGA + L + + + R+ Sbjct: 22 LMALKQQIDQLSSQLSSGRVGETFAELGASRSDSLSARAMLSALDGYDVGITSAQPRVQL 81 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 ++ + K V + LV G + RD ES + N G+Y+F Sbjct: 82 ISTSVAQISKSVVTLRNALVSNNPGPGASEAL------ARDGLESTIAALNQQIGGRYVF 135 Query: 139 SGINSSEKPLNG 150 G P+ Sbjct: 136 GGREDRMPPVAS 147 >gi|317008945|gb|ADU79525.1| flagellar hook-associated protein FlgL [Helicobacter pylori India7] Length = 828 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAHTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRTAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 Score = 36.2 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLST---VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + + +I + G + +NI L+ + I Sbjct: 728 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLKTQVQSIR 787 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 788 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 828 >gi|15644923|ref|NP_207093.1| flagellar hook-associated protein FlgL [Helicobacter pylori 26695] gi|2313393|gb|AAD07364.1| flagellin B homolog (fla) [Helicobacter pylori 26695] Length = 828 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 KEHMINVANTSIGGEFLFGGSKVDRPPIDS 147 Score = 35.8 bits (81), Expect = 9.7, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLST---VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + + +I + G + +NI L+ + I Sbjct: 728 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLKTQVQSIR 787 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 788 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 828 >gi|90423519|ref|YP_531889.1| hypothetical protein RPC_2015 [Rhodopseudomonas palustris BisB18] gi|90105533|gb|ABD87570.1| hypothetical protein RPC_2015 [Rhodopseudomonas palustris BisB18] Length = 587 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 78/209 (37%), Gaps = 9/209 (4%) Query: 152 FTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA 211 + SLA S + Q F ++ + LA + ++ + + + + + Sbjct: 384 AAETSLAASSTIRATQDFFAGSNVAGLAPRRIDFTGAVPAYASTSSETTVIWYRGETSPT 443 Query: 212 NNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARN---V 268 + + R T + + A N IR I+ + + A + Sbjct: 444 D-----PRTSFAVRTGATSTVGIGARANEEAIRTILSGFAAVAVGSAASAFTQAADRWKA 498 Query: 269 LTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAH 328 L ++ S + Q + GI+ +++E + + I+ + + V Sbjct: 499 LAERSASLLPQE-EPLKAISTEFGIASSSLSEAQARNKAARGIVQSQVDGIESVSSQEIA 557 Query: 329 AQLSTLINKIEMSYMITTKLQKLSILNYL 357 +L + N+++ SY +T L KLS++NYL Sbjct: 558 VKLLDVQNRLQTSYQVTAMLLKLSLVNYL 586 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 74/231 (32%), Gaps = 13/231 (5%) Query: 12 FERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSL 71 R L + L ++ +G+ ++ +LG R + L + + + S Sbjct: 14 TSRQTADLLALKEQVNTLTRQLSSGRVAETYAELGVRRSESLSARGMLSALDGYDAAISS 73 Query: 72 VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT 131 V R+ + A L + K+ + L N M RDS + N Sbjct: 74 VRPRVELASASLGRISKMTTTLRNGLTTNRSDADANRA------MARDSLNGAIDALNQQ 127 Query: 132 DEGQYLFSGINSSEKP-------LNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 GQYLF G ++ P LNG + ++ + + + L L Sbjct: 128 LGGQYLFGGREVTQAPVLSGIILLNGDTSDPVKPLAGVKTLVNEQIRADLGTGLGRLTLS 187 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVS 235 S + ++ + A S+ S I Y EG +S Sbjct: 188 TPSSTSIEVREDADASARANLGFSISAQPTSSGSFATISYAASPPEGATLS 238 >gi|254778998|ref|YP_003057103.1| flagellar hook-associated protein FlgL [Helicobacter pylori B38] gi|254000909|emb|CAX28845.1| Flagellar hook-associated protein 3 (HAP3) (Hook-filament junction protein) [Helicobacter pylori B38] Length = 828 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAHTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 >gi|269976256|ref|ZP_06183252.1| flagellar hook-associated protein 3 [Mobiluncus mulieris 28-1] gi|269935585|gb|EEZ92123.1| flagellar hook-associated protein 3 [Mobiluncus mulieris 28-1] Length = 336 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 128/359 (35%), Gaps = 27/359 (7%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ++TS + + + +E+M +G+ + A S + +E Sbjct: 1 MITRVTTSMMANDTLANVQNNFQRLADANEKMASGKRMKFASDDPASSVSSMRLRKELAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + + T+ + + ++ K+ L+ + G A LR + Sbjct: 61 TEQYKRNIDDAQSWMQTADSAMDTVSKLYLHSKTKLINSVSGAMGKESLHALAADLRQNA 120 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 ++ +T AN T G+ +F+G +S F +++ L Sbjct: 121 QAIMTQANKTYLGRTVFAG--------------NSDKGVVFKT------GKDANGDLQFM 160 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV--- 238 E ++ A + I ++ + + + + I D G+ S V Sbjct: 161 QTEADNVTAMPVDRRINAYTTLPANVDG-NKLFGTGTIKYVPGPIDDETGLPTSFEVDDG 219 Query: 239 NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 N + +++ A E G + + ++ LS ++ + ++ LG K + Sbjct: 220 NNPSVMNLLVEAARLMETGDLGGEKGEKILAIQRELSRREKL---LHTNQSDLGARHKQV 276 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 E + + + + T IS V+ A ++S + + T+++ + S+L+YL Sbjct: 277 LEAQDNVVSDIQAVKTQISGVEDVDIQAATIEMSLAHMAYQAALGSTSRVVQPSLLDYL 335 >gi|209695755|ref|YP_002263685.1| flagellar hook-associated protein FlgL [Aliivibrio salmonicida LFI1238] gi|208009708|emb|CAQ80012.1| flagellar hook-associated protein type 3 FlgL [Aliivibrio salmonicida LFI1238] Length = 397 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 52/396 (13%), Positives = 130/396 (32%), Gaps = 47/396 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSIL---EWEQEKNHI 62 IS+ ++ + ++ +G+ L G + L Q+K + Sbjct: 5 ISSFHNYQSVQNDISRQEVKLHHNSAQLASGKKL---LTAGDDPVAALYAQNLTQKKEEL 61 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + + L RL + +++ ++ D ++ ++ G +A ++ + Sbjct: 62 RQYSDTIVLARNRLERHEVAIANAEQFADDAKRSVMEMINGSLAPEDRYAHAQDIKGIAD 121 Query: 123 SFVTFANMTD-EGQYLFSGINSSEKPL-----------NGYFTKDSLAKKSFDQMLQGFL 170 +F+ NM D G YLFSG S +P + ++ S + + Sbjct: 122 NFLNLTNMLDESGNYLFSGTKSKTQPFFRANDGTVTYAGDDYQRNLKVSGSIEVAVNDAG 181 Query: 171 EENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKF--SDDEYWANNWSNASDHNIKYRIKD 228 + + Q+ ++ + +D + +S A + Y++ Sbjct: 182 NKLFTEIKNPFGDYDPQYALQEGSELLLSKAKNMDYTDTSTYQVAFSAADNGQYNYQLSQ 241 Query: 229 TEGIDVSANVN-MRGIRD--------------------------IMFVAVIGTEFLSKNL 261 + SA N GI+ I E K++ Sbjct: 242 DGSVVKSAQFNPAEGIKYEGVDIQVRGQLKAGDAITLEPKKTISIFDAFKKAQELSMKDV 301 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 +D + ++ + + RA +G + ++++ Q+ + I +S Sbjct: 302 SDASSTAELHQVTEEFHAAFIHLSQARAEVGTRQNTLDQQESQHQDFDLTISKSLSSIED 361 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A + + ++ S K++ +++ NY+ Sbjct: 362 LDYAQAVIEFNENTRALQASQQAFGKVKDITLFNYV 397 >gi|170737045|ref|YP_001778305.1| flagellar hook-associated protein 3 [Burkholderia cenocepacia MC0-3] gi|169819233|gb|ACA93815.1| flagellar hook-associated protein 3 [Burkholderia cenocepacia MC0-3] Length = 304 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 121/352 (34%), Gaps = 54/352 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I++ M + N + L ++ TGQ +L E++ + + Sbjct: 3 IASQHFGNTMLATLRASNSKAADLTSKISTGQRVQRASDDPIAAARLLLIERDTSVLQRY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++ RL ++ HL M V + L+ +G A LR + Sbjct: 63 QKNIDTLSVRLQKNEVHLDGMLDTVMAVHDSLLSAADGSRSAADLNALAAPLRMRLNNLK 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN D G +LFSG ++ P+ T ++ S+ E + ++ + Sbjct: 123 QAANAKDGDGNFLFSGSQTNTAPIAYDATAPVGSRYSY-----AGNGELQQVVIGHGVTQ 177 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 +++ + + D + +LE I+ E +V+ + Sbjct: 178 HANVTVESLADVMNKLEAA----------------------IEAMEDPEVNPSA------ 209 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 R VLT + S G+ + + LG ++ ++ Sbjct: 210 ------------------PAVRGVLTAALDSVKHNGIDALSVKITDLGGAQNTLDLMSEN 251 Query: 305 LQNKNNIIDTYISKSIG-VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + + + +G ++ A QL+ I ++ SY I T++ +LS+ + Sbjct: 252 HSAQL-VANGQAVSLVGELDFAEAIDQLNNYIAAVKGSYAIYTRMTQLSLFD 302 >gi|317013741|gb|ADU81177.1| flagellar hook-associated protein FlgL [Helicobacter pylori Gambia94/24] Length = 828 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNHYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMINVANTSIGGEFLFGGSKVDRPPIDS 147 Score = 36.2 bits (82), Expect = 8.4, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLST---VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + + +I + G + +NI L+ + I Sbjct: 728 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLKTQVQSIR 787 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 788 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 828 >gi|308184098|ref|YP_003928231.1| flagellar hook-associated protein FlgL [Helicobacter pylori SJM180] gi|308060018|gb|ADO01914.1| flagellar hook-associated protein FlgL [Helicobacter pylori SJM180] Length = 828 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 Score = 36.6 bits (83), Expect = 6.3, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLST---VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + + +I + G + +NI L+ + I Sbjct: 728 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLKTQVQSIR 787 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 788 G---ETTGADMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 828 >gi|208434241|ref|YP_002265907.1| putative flagellar-hook associated protein 3 [Helicobacter pylori G27] gi|208432170|gb|ACI27041.1| putative flagellar-hook associated protein 3 [Helicobacter pylori G27] Length = 828 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 Score = 36.6 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI---SEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + I + A G + +NI L+ + I Sbjct: 728 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGSHGKAFENIIRRNEVLKTQVQSIR 787 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 788 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 828 >gi|317012136|gb|ADU82744.1| flagellar hook-associated protein FlgL [Helicobacter pylori Lithuania75] Length = 828 Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 >gi|15611350|ref|NP_223001.1| flagellar hook-associated protein FlgL [Helicobacter pylori J99] gi|4154805|gb|AAD05861.1| putative FLAGELLAR-HOOK ASSOCIATED PROTEIN 3 (HAP3) [Helicobacter pylori J99] Length = 828 Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNHYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 KEHMINVANTSIGGEFLFGGSKVDRPPIDS 147 Score = 36.2 bits (82), Expect = 8.6, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLST---VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + + +I + G + +NI L+ + I Sbjct: 728 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLKTQVQSIR 787 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 788 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 828 >gi|77359729|ref|YP_339304.1| flagellar hook-associated protein FlgL [Pseudoalteromonas haloplanktis TAC125] gi|76874640|emb|CAI85861.1| putative flagellar synthesis; flagellar regulon; hook-associated protein [Pseudoalteromonas haloplanktis TAC125] Length = 418 Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 59/419 (14%), Positives = 128/419 (30%), Gaps = 70/419 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +S + +++ + E + TGQ + A ++ + + + + Sbjct: 3 LSNNLMYQNSINKILQNQNGVANAQERVNTGQKYLSTSEAPADISQAMLYTNKIQSNEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + RL T ++ L + + +Q + G + A L + ++ Sbjct: 63 TKNINQLNGRLKTEESVLQGINESIQAAKDIALKAGNGAYSKDDLKSLASELTEIQKTLA 122 Query: 126 TFANM-TDEGQYLFSGINSSEKPLNGYFTKD-----------------SLAKKSFDQMLQ 167 N +++G+Y+FSG S +P ++ KS D Sbjct: 123 NLMNTRSEDGKYIFSGYQDSTQPYQFDAASGKYNYQGDQGQHKITIAEGVSIKSSDNGYD 182 Query: 168 GFLEENSKSLLAGQHLEVSS-MNAQQMTD------------FIKQLEDKFSDDEYWANNW 214 F + N++ +A + SS + D + + S N Sbjct: 183 TFEKTNARLDVASNTGDASSTLTGSVYVDKQGVFDQFHKEQYNPDPDPLVSATANTFNVV 242 Query: 215 SNAS------DHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVI---------------- 252 A D R + VS NV I + Sbjct: 243 VTAGANPGDPDQYEILRDGVAQIPPVSGNVTDEPIEFAGMKIQLSGAAPGQLDFSLEPPH 302 Query: 253 -----------GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLG---ISEKNI 298 T + L + ++ +Q ++ +A LG + + Sbjct: 303 KENVLNTLQGLITGLNNGTLAGDDFQQVLNDGVTQLQNASEQVVFTQASLGGRMNVLERV 362 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + L +N + S + V+ A ++L+ ++ S +L KLS+ +Y+ Sbjct: 363 TDSNSALDIQN---QSNRSSLLEVDMAAAISELTQQETALQASQATFGRLAKLSLFDYI 418 >gi|257876026|ref|ZP_05655679.1| flagellin [Enterococcus casseliflavus EC20] gi|257810192|gb|EEV39012.1| flagellin [Enterococcus casseliflavus EC20] Length = 306 Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 89/309 (28%), Gaps = 61/309 (19%) Query: 53 LEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPI 112 + Q K + S S + L S+ + + + + + Sbjct: 54 VSLNQNKTYTNTIKDSISWT----KAQDSALESVSTSMLRIRSLVQSSANATAGSEELGA 109 Query: 113 NAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEE 172 N + E V N +G+YLFSG N++ Sbjct: 110 NRSEIEQEIEGIVESLNTNFDGRYLFSGTNTT---------------------------- 141 Query: 173 NSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGI 232 + +++ N + ++ I + + Sbjct: 142 -------------------------TAPFEIVKENDAIVGIKYNGTSEDLPREIANGVSV 176 Query: 233 DVSANV----NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQR 288 D+ A+ N G L L ++ L ++L+ Q + ++ R Sbjct: 177 DLLASGDRLMNETGTAADPQNLSTYFNDLLSALRSDDKDALGGELLTAHDQHATNVVNVR 236 Query: 289 AVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKL 348 A +G + + + + +S V+ + + + + + TK+ Sbjct: 237 AQIGTLYNRLEAAADRNETEKLNLTETLSNKQDVDIAEKYMEYQNQMTAYRSTLAMGTKI 296 Query: 349 QKLSILNYL 357 ++SIL+YL Sbjct: 297 MQMSILDYL 305 >gi|207091790|ref|ZP_03239577.1| flagellar hook-associated protein FlgL [Helicobacter pylori HPKX_438_AG0C1] Length = 828 Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 Score = 36.2 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI---SEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + I + A G + +NI L+ + I Sbjct: 728 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGSHGKAFENIIRRNEVLKTQVQSIR 787 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 788 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 828 >gi|298736758|ref|YP_003729288.1| flagellar hook-associated protein 3 FlgL [Helicobacter pylori B8] gi|298355952|emb|CBI66824.1| flagellar hook-associated protein 3 FlgL [Helicobacter pylori B8] Length = 828 Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 Score = 35.8 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLST---VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + + +I + G + +NI L+ + I Sbjct: 728 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLKTQVQSIR 787 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 788 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 828 >gi|307636990|gb|ADN79440.1| Flagellar hook-associated protein [Helicobacter pylori 908] Length = 839 Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 12 MRVTFGSKY---NQMNHYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 68 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 69 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 128 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 129 KEHMMNVANTSIGGEFLFGGSKVDRPPIDS 158 Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLST---VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + + +I + G + +NI L+ + I Sbjct: 739 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLKTQIQSIR 798 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 799 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 839 >gi|240137461|ref|YP_002961932.1| hypothetical protein MexAM1_META1p0726 [Methylobacterium extorquens AM1] gi|240007429|gb|ACS38655.1| conserved hypothetical protein [Methylobacterium extorquens AM1] Length = 597 Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 23/184 (12%), Positives = 64/184 (34%), Gaps = 8/184 (4%) Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRI--KDTEGIDVSANVN 239 + ++ +++ + S ASD + + +++ A N Sbjct: 413 GSPAAGLSPRRVAADGNGYAETASAKTVIWYKGDTASDPRATATVQAGTSRTVEIGAQAN 472 Query: 240 MRGIRDIMFVAVIGTE----FLSKNLTDGARNVLTKKMLSTVQQGLSG--IIEQRAVLGI 293 IR ++ + + ++ + + + G S + + G+ Sbjct: 473 EEAIRRMLAGIAAMAAENFTTGTGTVDTARFEAVSSRAANLLTAGTSQQSLEQIGTDFGL 532 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++ + + + V A+L +L +++ SY +T+ L ++S+ Sbjct: 533 AASSMANAKSVANTTKATLQDSLDGVDTVSTEEVAAKLLSLQTQLQASYKVTSILSEMSL 592 Query: 354 LNYL 357 +NYL Sbjct: 593 VNYL 596 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 1/170 (0%) Query: 13 ERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLV 72 +R + + L +++ TG++++ LG T+ L + L + Sbjct: 14 DRQSASLVSMKNQLDGLAQQLSTGRTAETYGGLGVARTTSLSAHAAISAQDGYLAAIGSA 73 Query: 73 TKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD 132 R+ + A L+ ++ + L ++ + + ++ + V N Sbjct: 74 ETRVKLTSASLTQLKALSDSTRSNLTGIVATRN-EKLPSATVQLAANNLSAAVDALNQQA 132 Query: 133 EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 G Y+FSG + P+ L+ + E K+ L Sbjct: 133 AGVYVFSGRATETAPVVSDQAILDGIPAEGLDGLRALIAEQKKADLGPSG 182 >gi|296134283|ref|YP_003641530.1| flagellar hook-associated protein 3 [Thermincola sp. JR] gi|296032861|gb|ADG83629.1| flagellar hook-associated protein 3 [Thermincola potens JR] Length = 292 Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 40/332 (12%), Positives = 96/332 (28%), Gaps = 63/332 (18%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 K+ E++ TG+ + V S L + L++ L T+ L Sbjct: 23 MNKIQEQLSTGKKINRPSDDPVGVVSSLRLRAGLTETEKYLNNVDDARAWLDTTDTALGQ 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 ++Q + A + + + AN T +G+Y+F G +S Sbjct: 83 ASDLLQRARELTIYGANDALAQQSRDALAQEIHQIRDQMIQVANTTHDGRYIFGGFKTSN 142 Query: 146 KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFS 205 +P + + D + + S+ + + +NAQ + + +E Sbjct: 143 QPFT------AAGAYTGDNGSIAYEIGVNVSMQVNIPGDAAFINAQDVFQLLADIEADL- 195 Query: 206 DDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGA 265 A + ++ E Sbjct: 196 ----------TAGNTASLSNVRVGE----------------------------------- 210 Query: 266 RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 + + S + + L +++ ++E + L +SK+ + Sbjct: 211 ----LDTAIDNILSLRSEVGAKTNRLDLTKSRLDEANLNLS-------ELLSKNEDINTA 259 Query: 326 TAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 QL N + ++ + +++++L Sbjct: 260 EVITQLKMQENTYRTALAAGARIIQPTLIDFL 291 >gi|332673140|gb|AEE69957.1| flagellar hook-associated protein 3 [Helicobacter pylori 83] Length = 828 Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLNQGIDVAQNAYTSTLNTDKALQEFSKTMETFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 >gi|217033413|ref|ZP_03438843.1| hypothetical protein HP9810_1g27 [Helicobacter pylori 98-10] gi|216944118|gb|EEC23546.1| hypothetical protein HP9810_1g27 [Helicobacter pylori 98-10] Length = 826 Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQDSNINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMETFKTKLIQSANDMHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 >gi|325995582|gb|ADZ50987.1| Flagellar hook-associated protein [Helicobacter pylori 2018] gi|325997178|gb|ADZ49386.1| Flagellar hook-associated protein [Helicobacter pylori 2017] Length = 838 Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 11 MRVTFGSKY---NQMNHYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 67 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 68 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 127 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 128 KEHMMNVANTSIGGEFLFGGSKVDRPPIDS 157 Score = 35.8 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLST---VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + + +I + G + +NI L+ + I Sbjct: 738 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLKTQIQSIR 797 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 798 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 838 >gi|83312927|ref|YP_423191.1| hypothetical protein amb3828 [Magnetospirillum magneticum AMB-1] gi|82947768|dbj|BAE52632.1| hypothetical protein [Magnetospirillum magneticum AMB-1] Length = 712 Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 26/183 (14%), Positives = 59/183 (32%), Gaps = 1/183 (0%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T ++ ++ +G + + A +++ ++ E+ Sbjct: 2 TRIGTLGANNAFVNRILDIQTRIQTEQIQVTSGLKAQSYDGIAAGTNTVINFQNEQAIAQ 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKT-DNNKFPINAGMLRDSYE 122 + +N + +L + ++S++K + L + + + + Sbjct: 62 RFIDNNDVWNTKLEAATTAIASVKKTLTIFRDSLESFRQNNPKNEQNIKGIQNTAFQALQ 121 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 S GQYLFSG S+ P+ S + +D + F + A Sbjct: 122 SIQADLGTNVNGQYLFSGGRVSDVPIQLPAGSLSEFQSMYDGSINTFSTTRNADTQAVSL 181 Query: 183 LEV 185 V Sbjct: 182 TNV 184 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 57/163 (34%), Gaps = 16/163 (9%) Query: 211 ANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTE--FLSKNLTDGARN- 267 +++W +++R+ +DV + + + + F + D + Sbjct: 549 SSSWYKGDTLQLQHRVDIDRTVDVGIYASDPAFEKGIRALALIAQGQFGTAGGLDSHQER 608 Query: 268 -----VLTKKMLSTVQQGL--------SGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 L L + G + ++L + K I+ + + Sbjct: 609 IGQALYLVNDSLESPAAGTPPFGTEKAGDVKSVASLLDGTRKTISLKNEKHNQFIGFLSK 668 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ V++ ++ + +E SY + +++ LS+LNYL Sbjct: 669 RVADIAQVDKTEIATKMLSDQTALEGSYQVLAQVKNLSLLNYL 711 >gi|257871324|ref|ZP_05650977.1| flagellin [Enterococcus gallinarum EG2] gi|257805488|gb|EEV34310.1| flagellin [Enterococcus gallinarum EG2] Length = 306 Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 88/309 (28%), Gaps = 61/309 (19%) Query: 53 LEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPI 112 + Q K + S S + L S+ + + + + + Sbjct: 54 VSLNQNKTYNNTIKDSISWT----KAQDSALESVSTSMLRIRSLVQSSANATAGSEELGA 109 Query: 113 NAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEE 172 N + E V N +G+YLFSG N++ Sbjct: 110 NRSEIEQEIEGIVESLNTNFDGRYLFSGTNTT---------------------------- 141 Query: 173 NSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGI 232 + ++ N S ++ I + + Sbjct: 142 -------------------------TAPFEIVKKNDAIVGIKYNGSSEDLPREIANGVSV 176 Query: 233 DVSANV----NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQR 288 D+ A+ N G L L ++ L ++L+ Q + ++ R Sbjct: 177 DLLASGDRLMNETGTAADPQNLSTYFNDLLSALRSDDKDALGGELLTAHDQHATNVVNVR 236 Query: 289 AVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKL 348 A +G + + + + +S V+ + + + + + TK+ Sbjct: 237 AQIGTLYNRLEAAADRNETEKLNLTETLSNKQDVDIAEKYMEYQNQMTAYRSTLAMGTKI 296 Query: 349 QKLSILNYL 357 ++SIL+YL Sbjct: 297 MQMSILDYL 305 >gi|218528945|ref|YP_002419761.1| hypothetical protein Mchl_0915 [Methylobacterium chloromethanicum CM4] gi|218521248|gb|ACK81833.1| conserved hypothetical protein [Methylobacterium chloromethanicum CM4] Length = 597 Score = 62.8 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 67/184 (36%), Gaps = 8/184 (4%) Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRI--KDTEGIDVSANVN 239 + ++ +++ + S ASD + + +++ A N Sbjct: 413 GSPAAGLSPRRVAADGNGYAETASAKTVIWYKGDTASDPRATATVQAGTSRTVEIGAQAN 472 Query: 240 MRGIRD-IMFVAVIGTE---FLSKNLTDGARNVLTKKMLSTVQQGLSG--IIEQRAVLGI 293 IR + +A + E + + ++ + S + G S + + G+ Sbjct: 473 EEAIRRTLAGIAAMAAENFTTGTGTVDTARFEAVSSRAASLLTAGTSQQSLEQIGTDFGL 532 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++ + + + V A+L +L +++ SY +T+ L ++S+ Sbjct: 533 AASSMANAKSVANTTKATLQDSLDGVDTVSTEEVAAKLLSLQTQLQASYKVTSILSEMSL 592 Query: 354 LNYL 357 +NYL Sbjct: 593 VNYL 596 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 1/170 (0%) Query: 13 ERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLV 72 +R + + L +++ TG++++ LG T+ L + L + Sbjct: 14 DRQSASLVSMKNQLDGLAQQLSTGRTAETYGGLGVARTTSLSAHAAISAQDGYLSAIGSA 73 Query: 73 TKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD 132 R+ + A L+ ++ + L ++ + + ++ + V N Sbjct: 74 ETRVKLTSASLTQLKALSDSTRSNLTGIVATRN-EKLPSATVQLAANNLSAAVDALNQQA 132 Query: 133 EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 G Y+FSG + P+ L+ + E K+ L Sbjct: 133 AGVYVFSGRATETAPVVSDQAILDGIPAEGLDGLRTLIAEQKKADLGPLG 182 >gi|315586288|gb|ADU40669.1| flagellar hook-associated protein 3 [Helicobacter pylori 35A] Length = 828 Score = 62.8 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSGINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMETFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSMRGEFLFGGSKVDRPPIDS 147 >gi|308273551|emb|CBX30153.1| hypothetical protein N47_D29620 [uncultured Desulfobacterium sp.] Length = 288 Score = 62.8 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 65/144 (45%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ ++++ + +++++ K ++ +G+ +T L+ + + + + Sbjct: 3 VTNKTVYDSVRYNLGKISEEMSKANQIASSGKLISDLSDDPVGLTQSLKIKSVISGLDQL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + SL LS S++ L+ +Q ++ D V + T ++ A ++++ + + Sbjct: 63 GRNVSLGKSWLSASESALTGVQDLISDTKALCVQMASSTTGASQRASAAATVQNTLDEIL 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLN 149 + AN G+Y+FSG + + Sbjct: 123 SLANTEVSGRYIFSGTKTDSAAFD 146 >gi|254559639|ref|YP_003066734.1| hypothetical protein METDI1098 [Methylobacterium extorquens DM4] gi|254266917|emb|CAX22716.1| conserved hypothetical protein [Methylobacterium extorquens DM4] Length = 597 Score = 62.8 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 67/184 (36%), Gaps = 8/184 (4%) Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRI--KDTEGIDVSANVN 239 + ++ +++ + S ASD + + +++ A N Sbjct: 413 GSPAAGLSPRRVAADGNGYAETASAKTVIWYKGDTASDPRATATVQAGTSRTVEIGAQAN 472 Query: 240 MRGIRD-IMFVAVIGTE---FLSKNLTDGARNVLTKKMLSTVQQGLSG--IIEQRAVLGI 293 IR + +A + E + + ++ + + + G S + + G+ Sbjct: 473 EEAIRRTLAGIAAMAAENFTTGTGTVDTARFEAVSSRAANLLTAGTSQQSLEQIGTDFGL 532 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++ + + + V A+L +L +++ SY +T+ L ++S+ Sbjct: 533 AASSMANAKSVANTTKATLQDSLDGVDTVSTEEVAAKLLSLQTQLQASYKVTSILSEMSL 592 Query: 354 LNYL 357 +NYL Sbjct: 593 VNYL 596 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 1/170 (0%) Query: 13 ERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLV 72 +R + + L +++ TG++++ LG T+ L + L + Sbjct: 14 DRQSASLVSMKNQLDGLAQQLSTGRTAETYGGLGVARTTSLSAHAAISAQNGYLAAIGSA 73 Query: 73 TKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD 132 R+ + A L+ ++ + L ++ + + ++ + V N Sbjct: 74 ETRVKLTSASLTQLKALSDSTRSNLTGIVATRN-EKLPSATVQLAANNLSAAVDALNQQA 132 Query: 133 EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 G Y+FSG + P+ L+ + E K+ L Sbjct: 133 AGVYVFSGRATETAPVVSDQAILDGIPAEGLDGLRTLIAEQKKADLGPSG 182 >gi|315497621|ref|YP_004086425.1| flagellin domain protein [Asticcacaulis excentricus CB 48] gi|315415633|gb|ADU12274.1| flagellin domain protein [Asticcacaulis excentricus CB 48] Length = 305 Score = 62.8 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 104/358 (29%), Gaps = 62/358 (17%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++ + + + ++ T + + G I ++ I Sbjct: 3 ISTGQMWGNALSNLMQAQIRKDEANNQLSTQKVATDFAGYGRGAEIIAAYQSSLERITAY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 V+ RL++ L D + + + +L+ SY +F Sbjct: 63 SQVAQSVSDRLASQNIALER----ASDGIATGKDGIMDAIASKSLDGLTTVLQSSYMAFA 118 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N +G YLF G N SE PL D + D G Sbjct: 119 DGLNYKHQGAYLFGGGNESEAPLAAMSLNDLAGTPAADVFKNG----------------- 161 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG--- 242 +I T + + G Sbjct: 162 ---------------------------------SVKKASKIDATTTLQTGMLASDIGTEG 188 Query: 243 ---IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 RD+ A I + A+ + + + + + +++ A+ G + + Sbjct: 189 ATLFRDL--KAFIDANAPMQGAMTDAQQATLQGLATRMNAAYTKMVDHTALNGTFQNRVE 246 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L+ + + ++ IS + A+ +L ++ + + L+ +S+L+ L Sbjct: 247 NTLKSLEGQESSLNNLISNKTDINMAEAYTKLEQADLTVQAASQVVANLKSVSLLDLL 304 >gi|254478850|ref|ZP_05092215.1| flagellar hook-associated protein 3 [Carboxydibrachium pacificum DSM 12653] gi|214035212|gb|EEB75921.1| flagellar hook-associated protein 3 [Carboxydibrachium pacificum DSM 12653] Length = 296 Score = 62.8 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 93/332 (28%), Gaps = 59/332 (17%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 K + +G+ V + L + + + L + + L+ Sbjct: 23 LQKGQNMLSSGKKFTRPSDDPVAVATSLRIKTDMARNDAYTKNADDAKSWLEITDSALAQ 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 + ++Q V G + A + + V N G+Y+F+G + Sbjct: 83 LGDLLQRTRELAVEGANGTLTQSDMEKIAQEIMQIKQQMVQVGNTQYNGRYIFAGFRTDS 142 Query: 146 KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFS 205 P + + S D F + +A + + Sbjct: 143 APFSE-----TDNGYSGDDNFIEFEIGPGGNKMA-----------------VNVPGSRLF 180 Query: 206 DDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGA 265 D +R + + + L +G Sbjct: 181 D-----------------------------------VVRGTSRLLQMMDDL-KSALENGN 204 Query: 266 RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 ++ M++ + L ++ RA +G I+ + LQN N +SK+ + Sbjct: 205 HQAVSG-MIANIDNQLENVLSVRAEVGAKSNRIDLIQNRLQNDNYNFTALLSKNEDADMA 263 Query: 326 TAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L N S ++ + S++++L Sbjct: 264 QVITNLKMDENVYRASLAAGARIIQPSLIDFL 295 >gi|110805099|ref|YP_688619.1| flagellar hook-associated protein FlgL [Shigella flexneri 5 str. 8401] gi|110614647|gb|ABF03314.1| flagellar hook-associated protein FlgL [Shigella flexneri 5 str. 8401] gi|333005649|gb|EGK25167.1| flagellar hook-associated protein 3 [Shigella flexneri K-218] gi|333008288|gb|EGK27762.1| flagellar hook-associated protein 3 [Shigella flexneri K-272] gi|333019778|gb|EGK39050.1| flagellar hook-associated protein 3 [Shigella flexneri K-227] Length = 317 Score = 62.8 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 56/356 (15%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I D +AS+ N+ Sbjct: 175 -------TGDKIFDSITSNAVAEPDG--------SASETNL------------------- 200 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGL----SGIIEQRAVLGISEKN 297 + + A + L +GL + ++ RA LG Sbjct: 201 ----FAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSLNNVLTVRAELGTQLNK 256 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 257 LESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|154687655|ref|YP_001422816.1| flagellar hook-associated protein FlgL [Bacillus amyloliquefaciens FZB42] gi|154353506|gb|ABS75585.1| FlgL [Bacillus amyloliquefaciens FZB42] Length = 305 Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 43/341 (12%), Positives = 99/341 (29%), Gaps = 68/341 (19%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 +L +++ TG+ +++ + + + + S L S++ ++S Sbjct: 23 LDRLQQQVSTGKKITKASDDPVVAMKGMQYRTQLAQVNQYQRNVSQGFTWLENSESSVNS 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 I+ + +V + + + V+ AN G+YLF+G NS Sbjct: 83 ETDIMGKIRDLMVQAKSDSNGETELKAIGTEIGQLKKQLVSVANTQVNGRYLFNGTNSDV 142 Query: 146 KPLN---------GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDF 196 P+ Y + + + L+ NS A + N + +F Sbjct: 143 PPITENADGTYTYNYENYTGASDVNINISNGAVLKVNSDPNSAFGGVAQ---NGDNVFEF 199 Query: 197 IKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF 256 + LE S S A + I G D M Sbjct: 200 LNSLEASLSKGTL-----SEADSDQVLSDI--------------DGFTDKM--------- 231 Query: 257 LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYI 316 +++ +G + + L+++ + + Sbjct: 232 ----------------------------NAEKSNIGARTNRLELIQTRLESQAATAEKVL 263 Query: 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S + VE + + + + + S++++L Sbjct: 264 SDNEDVEMEDVIVDYLSQQTVHRAALSVNANIIQPSLIDFL 304 >gi|163850385|ref|YP_001638428.1| hypothetical protein Mext_0952 [Methylobacterium extorquens PA1] gi|163661990|gb|ABY29357.1| conserved hypothetical protein [Methylobacterium extorquens PA1] Length = 597 Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 67/184 (36%), Gaps = 8/184 (4%) Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRI--KDTEGIDVSANVN 239 + ++ +++ + S ASD + + +++ A N Sbjct: 413 GSPAAGLSPRRVAADGNGYAETASAKTVIWYKGDTASDPRATATVQAGTSRTVEIGAQAN 472 Query: 240 MRGIRD-IMFVAVIGTE---FLSKNLTDGARNVLTKKMLSTVQQGLSG--IIEQRAVLGI 293 IR + +A + E + + ++ + + + G S + + G+ Sbjct: 473 EEAIRRTLAGIAAMAAENFTTGTGTVDTARFEAVSSRAANLLTAGTSQQSLEQIGTDFGL 532 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++ + + + V A+L +L +++ SY +T+ L ++S+ Sbjct: 533 AASSMANAKSVANTTKATLQDSLDGVDTVSTEEVAAKLLSLQTQLQASYKVTSILSEMSL 592 Query: 354 LNYL 357 +NYL Sbjct: 593 VNYL 596 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 1/170 (0%) Query: 13 ERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLV 72 +R + + L +++ TG++++ LG T+ L + L + Sbjct: 14 DRQSASLVSMKNQLDGLAQQLSTGRTAETYGGLGVARTTSLSAHAAISAQDGYLAAIGSA 73 Query: 73 TKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD 132 R+ + A L+ ++ + L ++ + + ++ + V N Sbjct: 74 ETRVKLTSASLTQLKALSDSTRSNLTGIVATRN-EKLPSATVQLAANNLSAAVDALNQQA 132 Query: 133 EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 G Y+FSG + P+ L+ + E K+ L Sbjct: 133 AGVYVFSGRATETAPVVSDQAILDGIPAEGLDGLRTLIAEQKKADLGPSG 182 >gi|317010575|gb|ADU84322.1| flagellar hook-associated protein FlgL [Helicobacter pylori SouthAfrica7] Length = 827 Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNHYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLNQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRNAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMINIANTSIGGEFLFGGSKVDRPPIDS 147 Score = 37.0 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLST---VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + + +I + G + +NI L+ + I Sbjct: 727 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGTHGKAFENIIRRNEVLKTQVQSIR 786 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 787 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 827 >gi|194365673|ref|YP_002028283.1| flagellar hook-associated protein FlgL [Stenotrophomonas maltophilia R551-3] gi|194348477|gb|ACF51600.1| flagellar hook-associated protein 3 [Stenotrophomonas maltophilia R551-3] Length = 400 Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 122/398 (30%), Gaps = 45/398 (11%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 ++ ISTS +F + L L +++ TG + + ++ Sbjct: 1 MSSRISTSMMFNQSVSLMMAKQAKLSHLEQQIATGSKIVSAKDDPVGAGAAVGLDRSLAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + V RL + L+ + ++ + + L Sbjct: 61 LDRMKLNAGNVQNRLGVQENTLAQVNDLMGRVNDLTIQASNPALSAADKKTLITELNQIR 120 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPLN---------------------GYFTKDSLAK 159 + ++ AN D G+Y+F G N + P + +DSL Sbjct: 121 DGLLSLANADDGTGRYVFGGTNDGDPPFAKINGKVVYRGDQTQRQVEVGPDTYVRDSLPG 180 Query: 160 KSFDQML---QGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSN 216 + GF++ + + G + ++++ + Q Sbjct: 181 SEIFMRIPTGDGFVDGGAAAGNTGNGV-LTNITRDGSDSWNGQSFSVRFTAANQYEVLDG 239 Query: 217 ASDHNIKYRIKDTEGIDV---------------SANVNMRGIRDIMFVAVIGTEFLSKNL 261 A + K + ++V S NV RDI L + Sbjct: 240 AGNVTGTGTYKAGDNLEVNGVRLQITGAPVAGDSFNVKPATSRDIFDTMDKLIAALDADT 299 Query: 262 TD----GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 A+ + L V + +I+ RA G K ++ + + T +S Sbjct: 300 GTTAKMSAQQNELQNALRDVARASERMIDSRAAGGAQLKALDNAADMREANGVTLKTTLS 359 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + ++ A +Q ++ + I +++Q +S+ N Sbjct: 360 QMRDLDYADALSQYQLQSTALQAAQTIFSQMQSMSLFN 397 >gi|257866413|ref|ZP_05646066.1| flagellin [Enterococcus casseliflavus EC30] gi|257873071|ref|ZP_05652724.1| flagellin [Enterococcus casseliflavus EC10] gi|325567495|ref|ZP_08144162.1| flagellin family protein [Enterococcus casseliflavus ATCC 12755] gi|257800371|gb|EEV29399.1| flagellin [Enterococcus casseliflavus EC30] gi|257807235|gb|EEV36057.1| flagellin [Enterococcus casseliflavus EC10] gi|325158928|gb|EGC71074.1| flagellin family protein [Enterococcus casseliflavus ATCC 12755] Length = 306 Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 89/309 (28%), Gaps = 61/309 (19%) Query: 53 LEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPI 112 + Q K + S S + L S+ + + + + + Sbjct: 54 VSLNQNKTYNNTIKDSISWT----KAQDSALESVSTSMLRIRSLVQSSANATAGSEELGA 109 Query: 113 NAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEE 172 N + E V N +G+YLFSG N++ Sbjct: 110 NRSEIEQEIEGIVESLNTNFDGRYLFSGTNTT---------------------------- 141 Query: 173 NSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGI 232 + +++ N + ++ I + + Sbjct: 142 -------------------------TAPFEIVKENDAIVGIKYNGTSEDLPREIANGVSV 176 Query: 233 DVSANV----NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQR 288 D+ A+ N G L L ++ L ++L+ Q + ++ R Sbjct: 177 DLLASGDRLMNETGTAADPQNLSTYFNDLLSALRSDDKDALGGELLTAHDQHATNVVNVR 236 Query: 289 AVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKL 348 A +G + + + + +S V+ + + + + + TK+ Sbjct: 237 AQIGTLYNRLEAAADRNETEKLNLTETLSNKQDVDIAEKYMEYQNQMTAYRSTLAMGTKI 296 Query: 349 QKLSILNYL 357 ++SIL+YL Sbjct: 297 MQMSILDYL 305 >gi|308061647|gb|ADO03535.1| flagellar hook-associated protein FlgL [Helicobacter pylori Cuz20] Length = 826 Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMETFKTKLIQSANDVHSETSRVAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 Score = 36.2 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLST---VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + + +I + G + +NI L+ + I Sbjct: 726 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLKTQVQSIR 785 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 786 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 826 >gi|326389603|ref|ZP_08211169.1| flagellar hook-associated protein 3 [Thermoanaerobacter ethanolicus JW 200] gi|325994318|gb|EGD52744.1| flagellar hook-associated protein 3 [Thermoanaerobacter ethanolicus JW 200] Length = 297 Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 99/332 (29%), Gaps = 58/332 (17%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 K + TG+ V + L + + L + LS Sbjct: 23 LQKNQNMLSTGKRISRPSDDPVAVATSLRIRTDMTRNDAYTKNADDAKSWLDITDTALSQ 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 + ++Q V G A + + N G+Y+F+G ++ Sbjct: 83 LNDLLQRTRELAVEGSNGTLTQTDMQKIANEIEQLKAQMIQVGNTQYNGRYIFAGFKTTT 142 Query: 146 KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFS 205 +P + + S D + F + AG + ++ ++ Sbjct: 143 QPFSE-----TKNSYSGDNGVIEF------EVGAGGNKIAVNVTGDKV------------ 179 Query: 206 DDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGA 265 NV+ GI + + + L L G Sbjct: 180 ------------------------------FNVDSTGISQL----LTVMDKLKNALDSGD 205 Query: 266 RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 ++ +++ V + L ++ RA +G ++ + LQ+ N +SK+ V+ Sbjct: 206 HQAVSN-LIADVDKQLENVLAVRADVGAKSNRLDLIQNRLQDDNYNFTALLSKNEDVDLA 264 Query: 326 TAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L N S ++ + S++++L Sbjct: 265 QVITNLQMDENVYRASLAAGARIIQPSLIDFL 296 >gi|300693345|ref|YP_003749318.1| flagellar hook-filament junction protein protein 3 [Ralstonia solanacearum PSI07] gi|299075382|emb|CBJ34677.1| flagellar hook-filament junction protein protein 3 [Ralstonia solanacearum PSI07] Length = 316 Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 114/353 (32%), Gaps = 42/353 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ F + + + VKL +++ TG + + A + +L+ +Q ++ + Sbjct: 3 VSTAQFFAASTVSMQNTQSNLVKLQQQISTGIALNSAGDNPAAMGQVLQLQQSQDSNDQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + RL+ + LS + +Q + +++ ++ Y+ + Sbjct: 63 QVNRDATDARLTNVSSALSDVITTLQQGKQSTIAANTTLLTDSQRVGILAQVKQQYQQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN D G LF G N + P +Q + + ++G + Sbjct: 123 STANRRDASGVALFGGANGTTDPFTSTAGSVQYVGSGQPPTVQVAQNISMPNSVSGDSVF 182 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V N S+AS+ N N + Sbjct: 183 VRVPN-------------------------SDASNP----------------NANQSVFK 201 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + ++ ++ + + + ++ + +G + I Sbjct: 202 TYENLITALSKPITTSADVTTIQTAVQTAQGNLDSAYQVALQAQVTVGTQQAQITTLNSS 261 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 N + ISK V+ +A +Q S ++ + T +Q LS+ Y+ Sbjct: 262 GSNFGEQLKEQISKLQSVDYTSAISQFSQQQVSLQAAQKTFTSMQGLSLFQYI 314 >gi|52082075|ref|YP_080866.1| flagellar hook-associated protein FlgL [Bacillus licheniformis ATCC 14580] gi|52787464|ref|YP_093293.1| flagellar hook-associated protein FlgL [Bacillus licheniformis ATCC 14580] gi|319647942|ref|ZP_08002160.1| FlgL protein [Bacillus sp. BT1B_CT2] gi|52005286|gb|AAU25228.1| flagellar hook-associated protein 3 [Bacillus licheniformis ATCC 14580] gi|52349966|gb|AAU42600.1| FlgL [Bacillus licheniformis ATCC 14580] gi|317390283|gb|EFV71092.1| FlgL protein [Bacillus sp. BT1B_CT2] Length = 303 Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 98/332 (29%), Gaps = 52/332 (15%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 KL ++ +G+ L++ + + + + + S L ++ +++ Sbjct: 23 LDKLQSQISSGKKITKASDDPVVAMKSLKYNTQLSQVKQYQSNASQAFTWLENTETNITE 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 I+ + V ++ + + + AN G+YLF+G NS Sbjct: 83 GIDIMAKIRELTVKAQNSTNGKDELNAIGVEIGQLKDQLIQIANTQVNGRYLFNGTNSDV 142 Query: 146 KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFS 205 P+ K + F S S + +++N F Sbjct: 143 APIT---------KNADGTYTYNFENYTSSSDVLINVSPNATLNVN------SNPISAFG 187 Query: 206 DDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGA 265 S N+ I+ E L G Sbjct: 188 GQSS--------SGQNVFEMIESLENA----------------------------LKAGT 211 Query: 266 RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 + + LS + Q + + +R+ +G + L + +S + VE Sbjct: 212 MEGM-ENALSDIDQFSNQMSNERSDIGARYNRLELINARLSEQEETATKVLSDNEDVELE 270 Query: 326 TAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + T + + + K+ + +++++L Sbjct: 271 EIITEFITQQSVHRAALAVNAKIVQPTLVDFL 302 >gi|261839151|gb|ACX98916.1| flagellar hook-associated protein FlgL [Helicobacter pylori 52] Length = 828 Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDTNTQIASGLKIRYGYQNSNINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMETFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 Score = 36.6 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLST---VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + + +I + G + +NI L+ + I Sbjct: 728 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGTHGKAFENIIRRNEVLKTQVQSIR 787 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 788 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 828 >gi|188996941|ref|YP_001931192.1| flagellar hook-associated protein 3 [Sulfurihydrogenibium sp. YO3AOP1] gi|188932008|gb|ACD66638.1| flagellar hook-associated protein 3 [Sulfurihydrogenibium sp. YO3AOP1] Length = 313 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 108/335 (32%), Gaps = 44/335 (13%) Query: 23 NKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAH 82 + K +++ TG+ + L + +I L + V+ L +++ Sbjct: 20 QNEIEKYSKQIATGKKLLSPSDDTVATVASLRLKTINQNIDTYLRNMDFVSNVLDQAEST 79 Query: 83 LSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGI 141 LS++ K Q++ ++ +L G D + + + + AN + +F G+ Sbjct: 80 LSNISKAGQELRVEIIRLLNTGVLDKEDAKVLRDYFVNMKDYIIKQANYSIGDTRIFGGV 139 Query: 142 NSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLE 201 S P + D QG E + G L F ++ Sbjct: 140 KSQTDPF------------APDGTYQGETTETKVPVAPGVELNT---------TFNGKVY 178 Query: 202 DKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNL 261 ++D ++ E ID ++ I N Sbjct: 179 LGVNNDSN---------------KMIMAEAIDKIVSIIDNAI-------AGTGSLGDLNT 216 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 + N K+L GL+ +++ +++G K IN+ + + + IS Sbjct: 217 ATISVNGQNLKILEAFDVGLNNVLQYTSIIGTQVKIINDLKSGFEKNKVFNNNLISNLQD 276 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 V+ A L + + ++LS+L + Sbjct: 277 VDTAEAITNLQKAQTAYQALIATYNQNRQLSLLEF 311 >gi|298507070|gb|ADI85793.1| flagellar hook-filament junction protein FlgL [Geobacter sulfurreducens KN400] Length = 298 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 31/283 (10%), Positives = 76/283 (26%), Gaps = 59/283 (20%) Query: 76 LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQ 135 LS ++A + M ++ V + +D + + N G+ Sbjct: 73 LSMTEAAMDEMGNVLTRAKELTVQMANATSDAKARESGMNEIVQLRNQLIQLGNTQLNGR 132 Query: 136 YLFSGINSSEKPLNGYFT-KDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 Y+F G + P + + + + F+ N + + Sbjct: 133 YVFGGFKNDTPPFDSTGAFNGTDDSITIEIDRGAFVPINYSGGELLRGGAPPGSTGTDI- 191 Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGT 254 I + + + N + Sbjct: 192 -------------------------------IGVFDNLITALGANDQ------------- 207 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 + L ++ LS ++ R LG + ++ ++ + Sbjct: 208 -------------TAVQAELPNLEDALSQVLSTRTDLGARMNRLEGQKNVIEEMKFSLTK 254 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S V+ + L+ E + + K+ ++S+L+YL Sbjct: 255 VLSDKQDVDFMQVISDLTKQQTAFEAAIAASGKISQISLLDYL 297 >gi|300902474|ref|ZP_07120456.1| flagellar hook-associated protein 3 [Escherichia coli MS 84-1] gi|301304978|ref|ZP_07211080.1| flagellar hook-associated protein 3 [Escherichia coli MS 124-1] gi|300405506|gb|EFJ89044.1| flagellar hook-associated protein 3 [Escherichia coli MS 84-1] gi|300839696|gb|EFK67456.1| flagellar hook-associated protein 3 [Escherichia coli MS 124-1] gi|315253884|gb|EFU33852.1| flagellar hook-associated protein 3 [Escherichia coli MS 85-1] Length = 317 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 56/356 (15%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGFRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I D +AS+ N+ Sbjct: 175 -------TGDKIFDSITSNAVAEPDG--------SASETNL------------------- 200 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQG----LSGIIEQRAVLGISEKN 297 + + A + L +G L+ ++ RA LG Sbjct: 201 ----FAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSLNNVLTVRAELGTQLNE 256 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 257 LESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|188527101|ref|YP_001909788.1| flagellar hook-associated protein FlgL [Helicobacter pylori Shi470] gi|188143341|gb|ACD47758.1| flagellar hook-associated protein FlgL [Helicobacter pylori Shi470] Length = 828 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMETFKTKLIQSANDVHSETSRVAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 E + AN + G++LF G P++ Sbjct: 118 REHMMNVANTSIGGEFLFGGSKVDRPPIDS 147 Score = 35.8 bits (81), Expect = 9.4, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLST---VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + + +I + G + +NI L+ + I Sbjct: 728 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLKTQVQSIR 787 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 788 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 828 >gi|193069521|ref|ZP_03050475.1| flagellar hook-associated protein 3 [Escherichia coli E110019] gi|192957269|gb|EDV87718.1| flagellar hook-associated protein 3 [Escherichia coli E110019] Length = 317 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 56/356 (15%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I D +AS+ N+ Sbjct: 175 -------TGDKIFDSITSNAVAEPDG--------SASETNL------------------- 200 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQG----LSGIIEQRAVLGISEKN 297 + + A + L +G L+ ++ RA LG Sbjct: 201 ----FAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSLNNVLTVRAELGTQLNE 256 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 257 LESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|300716225|ref|YP_003741028.1| Hook-filament junction protein [Erwinia billingiae Eb661] gi|299062061|emb|CAX59177.1| Hook-filament junction protein [Erwinia billingiae Eb661] Length = 319 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 115/351 (32%), Gaps = 36/351 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ I+++ +K+ E++ +G+ + Q + ++ Sbjct: 3 LSTAQIYDQQMRGISSSQASWLKVGEQLSSGKRVVNPSDDPVAAAQAVVLSQAQAQTSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + T +S + +L + +VQ +V G ++ A L + + Sbjct: 63 STARGFATNNISQEETNLQQVTSVVQQAQTIVVAAANGTLSDDDRASYAQQLTGIRDQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F+G + + P + D + ++ N Sbjct: 123 NLANTTDGNGRYMFAGYQTDKAPFTQ-DANGDVTYVGGDTPISQKVDSNRTM-------- 173 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V++ Q+ + D +N + IK E D + + Sbjct: 174 VTNHTGSQVFTSLTSNPTAEPDGSASESNIFTTLNTAIKALNTPLESADQATS------- 226 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 A + K ++ L+ ++ R+VLG ++ Sbjct: 227 -------------------DAASAALDKTNRGLKNSLNNVLAVRSVLGTQLTELDNLDSK 267 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + T +S + V+ +A + + ++ SY + T + +S+ Sbjct: 268 GDDTKVNQATQMSNLVDVDYTSAISSYTMQQTALQASYKVFTDMSSMSLFK 318 >gi|224825784|ref|ZP_03698888.1| flagellar hook-associated protein 3 [Lutiella nitroferrum 2002] gi|224602008|gb|EEG08187.1| flagellar hook-associated protein 3 [Lutiella nitroferrum 2002] Length = 303 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 122/351 (34%), Gaps = 53/351 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++++ M+ + N L ++M +G +L ++E+ + + Sbjct: 3 VASNQFQASMSAAMQSANSRLADLQQQMSSGDRLLVPSDDPVASVRLLRLQREEAALTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + RLS ++++L M K + LV +G + + L + +S Sbjct: 63 RDNIAALRSRLSMNESYLDGMSKDMMQARDLLVWAADGGNTADDLRAMSSSLANLRDSLF 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN D EG+YLFSG S+ + + T+ + ++ SF + + ++ + Sbjct: 123 YAANTKDQEGRYLFSGTASATQTIAVDNTQPAGSRYSFSG-----NTDRQQVVIGHGVTQ 177 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 +++ + M F+ QL+ + ID + + Sbjct: 178 PANVTLEDMAAFLNQLD----------------------------QTIDTLQSPTLDP-- 207 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + ++ R L L I + A LG ++ + Sbjct: 208 ------------GNPSVGQTVRQTL-----DGTDTALKAIGVKIAQLGGAQNTLQMMDDN 250 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 N + I+ ++ A +++ + ++ S K+ LS+ + Sbjct: 251 HSNVSLANQQSIANLGNLDYAEASINMNSYLLAVQASQKAYGKISALSLFD 301 >gi|83747647|ref|ZP_00944683.1| FlgL [Ralstonia solanacearum UW551] gi|207728353|ref|YP_002256747.1| flagellar hook-associated protein 3 [Ralstonia solanacearum MolK2] gi|207739730|ref|YP_002258123.1| flagellar hook-associated protein 3 [Ralstonia solanacearum IPO1609] gi|83725699|gb|EAP72841.1| FlgL [Ralstonia solanacearum UW551] gi|206591599|emb|CAQ57211.1| flagellar hook-associated protein 3 [Ralstonia solanacearum MolK2] gi|206593112|emb|CAQ60018.1| flagellar hook-associated protein 3 [Ralstonia solanacearum IPO1609] Length = 316 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 117/353 (33%), Gaps = 42/353 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ F + + VKL +++ TG + + A + +L+ +Q ++ + Sbjct: 3 VSTAQFFAASTASMQSTQSNLVKLQQQLSTGIALNSAGDNPAAMGQVLQLQQSQDTSDQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + RL++ + LS + +Q + +++ ++ Y+ + Sbjct: 63 QVNRDATNARLTSVSSALSDVISTLQQGKQSTIAANTSLLTDSQRVGILAQVKQQYQQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN D G LF G N + P A +Q + + + ++G + Sbjct: 123 SSANQRDASGVALFGGANGTTDPFVSSAGSVQYAGSGQPPTVQVAQDISMPNSVSGDSVF 182 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V R+ +T+ + S N + Sbjct: 183 V---------------------------------------RVPNTDASNPS--ANQSVFK 201 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + ++ ++ + K + + ++ + +G + I Sbjct: 202 TYENLITALSKPITTSADVTTMQAAVKTAQNNLDNAYQVALQAQVTVGTQQSQITTLNSS 261 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 N + ISK V+ +A +Q S ++ + T +Q LS+ Y+ Sbjct: 262 GSNFGEQLKEQISKLQSVDYTSAISQFSQQQVSLQAAQKTFTSMQGLSLFQYI 314 >gi|171059405|ref|YP_001791754.1| flagellar hook-associated protein 3 [Leptothrix cholodnii SP-6] gi|170776850|gb|ACB34989.1| flagellar hook-associated protein 3 [Leptothrix cholodnii SP-6] Length = 405 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 55/403 (13%), Positives = 111/403 (27%), Gaps = 53/403 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+S +E + ++ ++ +G+ G + Sbjct: 3 VSTASTYESSINTLQRRQQELSLAQGQLTSGKK--IGKPSDDPTGAARAERALIEQTRGE 60 Query: 66 LHSNSLVTKR--LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + R ++ S+ L +VQ L+ G + A L + Sbjct: 61 TTLRVIDASRNAMTLSEGALGDAVDLVQTAREALMAAGNGSYTAGERKAVALQLSELRNQ 120 Query: 124 FVTFANMTD-EGQYLFSGINSSEKPL------NGYFTKDSLAKKSFDQMLQGFLEENSKS 176 + AN D G YLF G P Y + + D+ L ++ Sbjct: 121 LLNVANQQDGNGGYLFGGQGVQTAPFLDAVGGVDYASTGGQINGATDERLPLSVDGQQIW 180 Query: 177 LLAGQHLEVSSMNAQQMTDFI------KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 L A V + A + + + + ++S + ++Y I D++ Sbjct: 181 LQARSGNGVFTTAADAANSGSGWVNAGQVTDPAAYTGKSYEVSFSAGAGGALEYSITDSD 240 Query: 231 ------------------------GIDVSANVNMRGIRDIMFVAV------------IGT 254 I + + Sbjct: 241 GASIASNQPYSAGKAITDVPGVAFTISGTPSATGTPPDRFTVAPSQPELSVFDALDRALA 300 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 N G L + Q LS RA++G + ++ + T Sbjct: 301 VLNDPNANPGQVMQGVNAGLRDMDQALSSFSSARAMVGETLNRLDGVGDRTDARILSSKT 360 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S + ++ A + S + + ++QKLS+ NY+ Sbjct: 361 TRSNAEDLDMVEAISDFSNKQTSYQAALQSYAQVQKLSLFNYI 403 >gi|39998133|ref|NP_954084.1| flagellar hook-associated protein FlgL [Geobacter sulfurreducens PCA] gi|39985079|gb|AAR36434.1| flagellar hook-associated protein FlgL [Geobacter sulfurreducens PCA] Length = 298 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 40/359 (11%), Positives = 100/359 (27%), Gaps = 64/359 (17%) Query: 1 MKTTGISTSSI-FERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEK 59 M+ T +T+++ + + + + L ++ TG + IL + Sbjct: 1 MRVTQNTTANLVLNSLQTIRRRTEE----LEQQAATGVKINAPGDDPVTAQQILHMKSLM 56 Query: 60 NHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 + + S LS ++A + M ++ V + +D + Sbjct: 57 AAGDQYSRNISNGISWLSMTEAAMDEMGNVLTRAKELTVQMANATSDAKARESGMNEIVQ 116 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFT-KDSLAKKSFDQMLQGFLEENSKSLL 178 + N G+Y+F G + P + + + + F+ N Sbjct: 117 LRNQLIQLGNTQLNGRYVFGGFKNDTPPFDSTGAFNGTDDSITIEIDRGAFVPINYSGGE 176 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 + + I + + + Sbjct: 177 LLRGGTPPGSTGTDI--------------------------------IGVFDNLITALGA 204 Query: 239 NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 N + + L ++ LS ++ R LG + Sbjct: 205 NDQ--------------------------TAVQAELPNLEDALSQVLSTRTDLGARMNRL 238 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ ++ + +S V+ + L+ E + + K+ ++S+L+YL Sbjct: 239 EGQKNVIEEMKFSLTKVLSDKQDVDFMQVISDLTKQQTAFEAAIAASGKISQISLLDYL 297 >gi|237755866|ref|ZP_04584462.1| flagellar hook-associated protein 3 [Sulfurihydrogenibium yellowstonense SS-5] gi|237691977|gb|EEP60989.1| flagellar hook-associated protein 3 [Sulfurihydrogenibium yellowstonense SS-5] Length = 313 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 108/338 (31%), Gaps = 50/338 (14%) Query: 23 NKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAH 82 + K +++ TG+ + L + +I L + V L +++ Sbjct: 20 QNEIEKYSKQIATGKKLLSPSDDTVATVASLRLKTINQNIDTYLRNMDFVLNVLDQAEST 79 Query: 83 LSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGI 141 LS++ K Q++ +V +L G D + + + AN + +F G+ Sbjct: 80 LSNISKAGQELRVEIVRLLNTGVLDKEDAKVLRDYFVSMKDYIIKQANYSIGDTRIFGGV 139 Query: 142 NSSEKPLNG---YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 S P + Y + + K ++ + L + + M I Sbjct: 140 KSQTDPFDSNGFYQGETTETKVPVAPGVEINTTFDGSKYLGVDTNDKQMI----MIKAID 195 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLS 258 ++ D D I E + VN + ++ + Sbjct: 196 KIVDII--------------DRAIAGTGSLGELNTATIPVNGQNLKIL------------ 229 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 A +V GL+ +++ +++G K IN+ + + D IS Sbjct: 230 -----EAFDV-----------GLNNVLQYTSIIGTKVKIINDLKSGFEKNKVFNDNLISN 273 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 V+ A L + + ++LS+L++ Sbjct: 274 LQDVDAAQAITNLQKAQTAYQALIATYNQNRQLSLLDF 311 >gi|329849967|ref|ZP_08264813.1| flagellin [Asticcacaulis biprosthecum C19] gi|328841878|gb|EGF91448.1| flagellin [Asticcacaulis biprosthecum C19] Length = 306 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 109/342 (31%), Gaps = 61/342 (17%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST++ + + + K ++++ T + + + G I ++ + I Sbjct: 3 VSTAATWSNALNNLMKSQERQNKANDQVSTQKVATDLMGYGRSSEIIAAYQASASRINSY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + N V +RL++ L++ + ++ L + + G + + Sbjct: 63 VAVNKSVAERLNSQDLALTTTSDAAANGKESIMNALASNSGASLMETMQGAFSIALQG-- 120 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 NM GQY+F G N ++ P+ + A Sbjct: 121 --LNMEHHGQYMFGGGNDNKDPVTVATLSELAA--------------------------- 151 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++D F++ + RI + + + G RD Sbjct: 152 ------------TNIDDVFANG-----------NVKKSSRIDASTTLQTGFLASDLG-RD 187 Query: 246 IMFVAVIGTEFLSKNLT------DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 +M + EF + A+ + + ++EQ ++ G +K + Sbjct: 188 MMQLFKDIQEFNNGPDGPFGTQLTDAQKTFLTEKSTQFSAVYDELVEQTSLNGTLQKRVE 247 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 + L+ + + ++ I + A++ L ++ S Sbjct: 248 TSQAALEGQASSLNELIGSRTEADMAKAYSNLQQAQVSVQAS 289 >gi|219670202|ref|YP_002460637.1| flagellar hook-associated protein 3 [Desulfitobacterium hafniense DCB-2] gi|219540462|gb|ACL22201.1| flagellar hook-associated protein 3 [Desulfitobacterium hafniense DCB-2] Length = 327 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 115/353 (32%), Gaps = 30/353 (8%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS + + + + KL +M TGQ + + L ++ +++ + Sbjct: 3 ISNNMLSRNLLLNLWAAQGRMDKLQNQMSTGQKINRPSDDPVGTENSLRFKSNISYLNQL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY-ESF 124 + + T+ + M ++Q V + T N++ + D E Sbjct: 63 KANAKEGIAYMDTTDDVMGEMSLMIQRAKELAVHAMNTSTVNDEDRKKIAIEIDQIREHV 122 Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN +Y+F G ++ +P F K + + D + + + ++ + Sbjct: 123 IELANTKVGTKYIFGGT-ANVEP----FPKGATGWQGSDDTKKFQVGGDLSIEVSVNGHD 177 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + + +D + + AS + + +N+N Sbjct: 178 LFG------AGWEYTPKTPATDPPTYEYQETGASGIAMFDTLAQLSKALNESNIN----- 226 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + VL K ++ I + RA LG + ++ Sbjct: 227 ---------GVDDGTGTEEDGVEVLLSK----LELQADHISDVRAQLGARQNRMDSVYTQ 273 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L + + + ++ + + T + + + + TK+ + S+ ++L Sbjct: 274 LDSTSANLGDSLANVLYADIAETLVNFKTQDSIYQAALSVGTKIIQPSLADFL 326 >gi|333004894|gb|EGK24414.1| flagellar hook-associated protein 3 [Shigella flexneri VA-6] Length = 317 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 110/356 (30%), Gaps = 56/356 (15%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I D +AS+ N+ Sbjct: 175 -------TGDKIFDSITSNAVAEPDG--------SASETNL------------------- 200 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQG----LSGIIEQRAVLGISEKN 297 + + A + L +G L+ ++ R LG Sbjct: 201 ----FAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSLNNVLTVRTELGTQLNK 256 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 257 LESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|254470400|ref|ZP_05083804.1| conserved hypothetical protein [Pseudovibrio sp. JE062] gi|211960711|gb|EEA95907.1| conserved hypothetical protein [Pseudovibrio sp. JE062] Length = 507 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 15/163 (9%) Query: 210 WANNWSNASDHNIKY--RIKDTEGIDVSANVNMRGIRDIM--FVAVIGTEFLSKNLTDGA 265 W N D +I D ++ A N + + + + +F + L D A Sbjct: 344 WYTGTENGDDPRADKVVQIDDNVRVEYGARANEKAFSEQLQNLAVFVAADFTAVTLDDEA 403 Query: 266 RNVLT-----------KKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 + LS SGI + + + + + Sbjct: 404 SEAVAKSYYSSLAKKSDDALSVAGDRNSGIQSVASEMSVVNTTVKRTAERQKQAALTYQN 463 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ V++ +++ L +E S+ T+ L L I N+L Sbjct: 464 TLTSLENVDKTEVGTEIAVLRTDLEASFQATSILLNLGITNFL 506 Score = 55.9 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 74/219 (33%), Gaps = 8/219 (3%) Query: 18 LTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLS 77 L + ++ +G S + + LE +E ++I SN++ + +L Sbjct: 4 LLMQQKTQLEDKSIQLTSGLKSQTYGGISSDSRMALELRREISNIGIYEDSNAIASIQLD 63 Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 L M+K+ + V + T + + + ++ N G YL Sbjct: 64 LMGKSLEHMEKMRAESVSAIDDNNYTLTTDGQ-TTSQQATEIMLHETISQLNSEVNGYYL 122 Query: 138 FSGINSSEKPLN--GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ-HLEVSSMNAQQMT 194 F G +++E P+ K ++++ + + + G+ V+S Sbjct: 123 FGGKDATEPPVASLDAIMDGQGGKLGLKELMKRYENAHIGASENGRIESSVTSPAGVPTL 182 Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 + + F + N AS ++ + + D Sbjct: 183 TLQQDNVEGF----GFQINSVTASSTDVTTAVVPEDVSD 217 >gi|85859204|ref|YP_461406.1| flagellin and related hook-associated proteins [Syntrophus aciditrophicus SB] gi|85722295|gb|ABC77238.1| flagellin and related hook-associated proteins [Syntrophus aciditrophicus SB] Length = 403 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 109/355 (30%), Gaps = 50/355 (14%) Query: 50 TSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNK 109 T I ++ + K+ I + + LS+S++ LS+ ++ V Sbjct: 51 TRIFDFRKTKSFIEQYNRNIDSADAWLSSSESKLSAAGDLISKAREIAVREASSTATETS 110 Query: 110 FPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKD--SLAKKSFDQMLQ 167 ++A ++ + ++ AN T G+YLFSG + P + A + Q Sbjct: 111 RKLSAENIQSLIDEMLSLANSTLNGRYLFSGSATDTPPFSASELPARIEAAGGAEGNEFQ 170 Query: 168 GFLEENSKSLLAGQHLEV----------------------------SSMNAQQMTDFIKQ 199 G +E ++A + + Sbjct: 171 GTVESQGHFTGTSNKTFAVRIDEGGPLAEVEYSISLDGGKSWCAGKDDLSAGTVE--LGD 228 Query: 200 LEDKFSDDEYWANNWSNASDHNIKY-----------RIKDTEGIDVSANVNMRGIRDIMF 248 DD+ A SN +K ++ D N+ G Sbjct: 229 GVQMAFDDDGGAKPLSNGDLFYVKSYAAGYYCGNNEKLSVDVQRDSPVTYNLTGQEVFTG 288 Query: 249 VAVIGTEF------LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 V G + L K + + + + + + +++ + I + G + + Sbjct: 289 VGSDGVDIFKCLADLKKAMQNSDQQSIQAQ-IGNLEKAQNQITLNVSKCGTRQNRLEIAE 347 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L + + +S + Q + ++ Y I +++ S+L++L Sbjct: 348 SNLADLELKVTELMSNIEDADLTQLVTQFTMKEVSLKACYAIASEIGNTSVLDFL 402 >gi|300311359|ref|YP_003775451.1| flagellar hook-filament junction protein [Herbaspirillum seropedicae SmR1] gi|167731107|emb|CAP19666.1| N-terminus flagellar protein [Herbaspirillum seropedicae] gi|300074144|gb|ADJ63543.1| flagellar hook-filament junction protein, N-terminus flagellin protein [Herbaspirillum seropedicae SmR1] Length = 377 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 119/378 (31%), Gaps = 30/378 (7%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST I++ N + +KL +++ Q L+ +Q + + Sbjct: 3 ISTQMIYQSSNNDLTSMQSQFLKLSQQVTAQQRVLLPSDDPVAAARALDMQQTADLNEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS+ Q +L SM ++ + ++ N + A ++ + + Sbjct: 63 KTNRQNANSALSSVQGNLESMTNMLTKLKSNVITAGNASYSNAERINMASEIKGNLAEVL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLN-------GYFTKDSLAKKSFDQMLQGFLEENSKSL 177 +AN D G YLF+G S+ +P Y D + + +++ Sbjct: 123 GYANAQDGQGNYLFAGFKSTTQPFTLDGTGGVVYNGDQGAMSLQVDSTRVMDISASGQAI 182 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKF------SDDEYWANNWSNASDHNIKYRIKDTEG 231 G ++ + M +FI L +D+ N A T Sbjct: 183 FQGNGQDIF----KTMNNFINVLSVPVTEAANKADETAANNFVYPAGSGLTPIAAYKTSL 238 Query: 232 IDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKML---------STVQQGLS 282 ++A +F A + S V+ + + + LS Sbjct: 239 AQLNALSPTDPTYQAVFTATAALKLQSDAADAARTPVVGSQAALTRNLASFNTQIDSLLS 298 Query: 283 GIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLST---LINKIE 339 + +A +G + ++ + I+ +G + +S + Sbjct: 299 NVTTAKASIGARQNELDNLDAAGEVNKENYTQTINNLLGRNPSDVNQLISDYTLTQTYLS 358 Query: 340 MSYMITTKLQKLSILNYL 357 + + LS+LNYL Sbjct: 359 AAQKVFVTTSGLSLLNYL 376 >gi|23016695|ref|ZP_00056448.1| COG5651: PPE-repeat proteins [Magnetospirillum magnetotacticum MS-1] Length = 712 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 41/349 (11%), Positives = 98/349 (28%), Gaps = 20/349 (5%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T ++ ++ +G + + + +++ ++ E+ Sbjct: 2 TRIGTLGANTAFVNRILDIQTRVQTEQVQVTSGLKAQSYDGIASGTNTVINFQNEQAIAQ 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKT-DNNKFPINAGMLRDSYE 122 + +N++ +L + ++ ++K + L + + + + Sbjct: 62 RFIDNNNVWNTKLEAATTAIAGVKKTLTIFRDSLQSFRQNNPKNEQNIKSIQNTAFQTLQ 121 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPLN-----------GYFTKDSLAKKSFDQMLQGFLE 171 S GQYLFSG S+ P+ Y + + + LQ Sbjct: 122 SIAADLGTNVNGQYLFSGGRVSDVPIQLPAGSLTEFQSLYDGSINTVSTTRNANLQEVSI 181 Query: 172 ENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYR----IK 227 ++ + + + F N D +K + I Sbjct: 182 SKLEATAMSFNGTNGVITPAKADAFKNVYAGSRITVSESTAQPPNNGDFTVKSKAMCNIA 241 Query: 228 DTEGIDVSANVNMRGIRDIMFVA--VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGII 285 T + ++ N+ + DG N+ S + Sbjct: 242 GTPLAEGNSTTNVISFGTTPTNILDTATGQLNFTFAPDGTMNMSANTAGSLSAMTVGSKF 301 Query: 286 EQRAVL--GISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLS 332 L G + + NKN +++ S + ++ A L+ Sbjct: 302 TISPQLAGGSATTGYEGAYEVVSNKNGVVNFKTSYDVAKDESVASTALT 350 Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 56/163 (34%), Gaps = 16/163 (9%) Query: 211 ANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTE--FLSKNLTDGARN- 267 ++ W +++R+ +DV + + + + F + D + Sbjct: 549 SSTWYKGDTLQLQHRVDIDRTVDVGIYASDPAFEKGIRALSLIAQGQFGTAGGLDSHQER 608 Query: 268 -----VLTKKMLSTVQQGL--------SGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 L L + G + ++L + K I+ + + Sbjct: 609 ISQALYLVNDALESPAAGTPPFGKEKTGDVKSVASLLDGTRKTISLKNEKHTQFIGFLSK 668 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ V++ ++ + +E SY I +L+ LS+LNY+ Sbjct: 669 RVADIAQVDKTEIATKMLSDQTALEGSYQILAQLKNLSLLNYM 711 >gi|15801200|ref|NP_287217.1| flagellar hook-associated protein FlgL [Escherichia coli O157:H7 EDL933] gi|15830715|ref|NP_309488.1| flagellar hook-associated protein FlgL [Escherichia coli O157:H7 str. Sakai] gi|168747141|ref|ZP_02772163.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4113] gi|168758624|ref|ZP_02783631.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4401] gi|168764495|ref|ZP_02789502.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4501] gi|168767742|ref|ZP_02792749.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4486] gi|168773928|ref|ZP_02798935.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4196] gi|168783613|ref|ZP_02808620.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4076] gi|168790018|ref|ZP_02815025.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC869] gi|168802028|ref|ZP_02827035.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC508] gi|195935473|ref|ZP_03080855.1| flagellar hook-associated protein FlgL [Escherichia coli O157:H7 str. EC4024] gi|208809642|ref|ZP_03251979.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4206] gi|208816148|ref|ZP_03257327.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4045] gi|208822389|ref|ZP_03262708.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4042] gi|209395853|ref|YP_002269929.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4115] gi|217328431|ref|ZP_03444513.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. TW14588] gi|254792465|ref|YP_003077302.1| flagellar hook-associated protein FlgL [Escherichia coli O157:H7 str. TW14359] gi|261227012|ref|ZP_05941293.1| flagellar hook-filament junction protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256246|ref|ZP_05948779.1| flagellar hook-filament junction protein [Escherichia coli O157:H7 str. FRIK966] gi|291282103|ref|YP_003498921.1| Flagellar hook-associated protein 3 [Escherichia coli O55:H7 str. CB9615] gi|12514624|gb|AAG55829.1|AE005318_6 flagellar biosynthesis; hook-filament junction protein [Escherichia coli O157:H7 str. EDL933] gi|13360925|dbj|BAB34884.1| flagellar hook-filament junction protein 3 FlgL [Escherichia coli O157:H7 str. Sakai] gi|187770518|gb|EDU34362.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4196] gi|188018057|gb|EDU56179.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4113] gi|188999096|gb|EDU68082.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4076] gi|189354584|gb|EDU73003.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4401] gi|189363052|gb|EDU81471.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4486] gi|189365534|gb|EDU83950.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4501] gi|189370497|gb|EDU88913.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC869] gi|189375934|gb|EDU94350.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC508] gi|208729443|gb|EDZ79044.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4206] gi|208732796|gb|EDZ81484.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4045] gi|208737874|gb|EDZ85557.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4042] gi|209157253|gb|ACI34686.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. EC4115] gi|209773308|gb|ACI84966.1| flagellar hook-filament junction protein 3 FlgL [Escherichia coli] gi|209773310|gb|ACI84967.1| flagellar hook-filament junction protein 3 FlgL [Escherichia coli] gi|209773312|gb|ACI84968.1| flagellar hook-filament junction protein 3 FlgL [Escherichia coli] gi|209773314|gb|ACI84969.1| flagellar hook-filament junction protein 3 FlgL [Escherichia coli] gi|209773316|gb|ACI84970.1| flagellar hook-filament junction protein 3 FlgL [Escherichia coli] gi|217318858|gb|EEC27284.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str. TW14588] gi|254591865|gb|ACT71226.1| flagellar hook-filament junction protein [Escherichia coli O157:H7 str. TW14359] gi|290761976|gb|ADD55937.1| Flagellar hook-associated protein 3 [Escherichia coli O55:H7 str. CB9615] gi|320189766|gb|EFW64422.1| Flagellar hook-associated protein FlgL [Escherichia coli O157:H7 str. EC1212] gi|320637534|gb|EFX07334.1| flagellar hook-associated protein FlgL [Escherichia coli O157:H7 str. G5101] gi|320643095|gb|EFX12296.1| flagellar hook-associated protein FlgL [Escherichia coli O157:H- str. 493-89] gi|320648553|gb|EFX17208.1| flagellar hook-associated protein FlgL [Escherichia coli O157:H- str. H 2687] gi|320653867|gb|EFX21941.1| flagellar hook-associated protein FlgL [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659347|gb|EFX26916.1| flagellar hook-associated protein FlgL [Escherichia coli O55:H7 str. USDA 5905] gi|320664482|gb|EFX31633.1| flagellar hook-associated protein FlgL [Escherichia coli O157:H7 str. LSU-61] gi|326339305|gb|EGD63119.1| Flagellar hook-associated protein FlgL [Escherichia coli O157:H7 str. 1125] gi|326344734|gb|EGD68482.1| Flagellar hook-associated protein FlgL [Escherichia coli O157:H7 str. 1044] Length = 317 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 107/352 (30%), Gaps = 48/352 (13%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G +N A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDNDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEVNGDYVGGTESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I D N D I Sbjct: 175 -------TGDKIFDSITSNAVAEPDGSASETNLFAMLDSAI------------------- 208 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 A + T K ++ L+ ++ RA LG + Sbjct: 209 --------AALKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESL 260 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 261 DSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|156934433|ref|YP_001438349.1| flagellar hook-associated protein FlgL [Cronobacter sakazakii ATCC BAA-894] gi|156532687|gb|ABU77513.1| hypothetical protein ESA_02264 [Cronobacter sakazakii ATCC BAA-894] Length = 314 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 102/336 (30%), Gaps = 37/336 (11%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 + +K E+M TG+ + + Q + + + + T+++S Sbjct: 10 ITDSQSTWLKYGEQMSTGKRVNRPSDDPIAAAQAVVLSQAQAQNEQYTQARTFATQKVSL 69 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYL 137 + LS + ++ +V G + A L+ + + AN TD G+Y+ Sbjct: 70 ESSVLSQVTSVITSAQEKIVYANNGTLSDTDRASVATDLQGMRDQLLNLANSTDGNGRYI 129 Query: 138 FSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFI 197 F+G + P +G + + EN + V + D I Sbjct: 130 FAGYKTDAAPFSGTPGNITYNGGT----------ENITQQVDSARTMVIGHTGDLVFDRI 179 Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 D + +D + + E Sbjct: 180 TSNAKPEPDGSP--------------SETNLFKMLDSAIAALKTPM-----------EGA 214 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 + G + ++K + L + A +G +K + + +S Sbjct: 215 DETTQQGLLDAVSKTSRG-LSNALDNVGTVLAEVGTQQKELENLDQLGAERTLGQTAQMS 273 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + V+ ++A + ++ SY + +Q +S+ Sbjct: 274 NLVDVDWNSAISSYVMQQAALQASYKAFSDMQGMSL 309 >gi|157693941|ref|YP_001488403.1| flagellar hook-associated protein FlgL [Bacillus pumilus SAFR-032] gi|157682699|gb|ABV63843.1| flagellar hook-associated protein 3 [Bacillus pumilus SAFR-032] Length = 303 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 43/347 (12%), Positives = 110/347 (31%), Gaps = 55/347 (15%) Query: 12 FERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSL 71 + + + K++E+ TG+ L++ + ++ + Sbjct: 10 QNSLRN-ISKSYEKLSKINEQAQTGRRFTKTSDDPVAAVKSLQYSTAMFRNEQYQNNLNE 68 Query: 72 VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT 131 + TS+ ++ + I+ ++ ++ G + + + N Sbjct: 69 AQNWIDTSETSVTEIIDIMSNVRDKVLDAANGTKQPEDLAAIGVEIGQMKKQIIDAMNTQ 128 Query: 132 DEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQ 191 G+++F+G N++ KP+ A +F + + + NS + + ++N+ Sbjct: 129 MLGKFVFNGTNTNVKPVVE------NADGTFTFNFENYTDANSVKSNISDGITL-NVNSN 181 Query: 192 QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEG-IDVSANVNMRGIRDIMFVA 250 ++ F +AS N+ + D E + N Sbjct: 182 PISAF----------------GGQSASGQNVIEMLTDLENSLKNGTFANS---------- 215 Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 L ++ Q + +R+ LG ++ L ++ Sbjct: 216 --------------------DDALGSIDQFKEVMSAERSDLGARSNRVDLVGSRLTSQFQ 255 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ S + VE A L + T K+ + S++++L Sbjct: 256 VLKDAKSNNEDVESEKAILDLLQQETVNRAALATTAKVIQPSLVDFL 302 >gi|332089153|gb|EGI94262.1| flagellar hook-associated protein 3 [Shigella boydii 5216-82] Length = 317 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 108/352 (30%), Gaps = 48/352 (13%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + F+ Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQFLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I D N D I Sbjct: 175 -------TGDKIFDSITSNAVAEPDGSASETNLFAMLDSAI------------------- 208 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 A + T K ++ L+ ++ RA LG + Sbjct: 209 --------AALKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESL 260 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 261 DSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|307546961|ref|YP_003899440.1| flagellar hook-associated protein FlgL [Halomonas elongata DSM 2581] gi|307218985|emb|CBV44255.1| flagellar hook-associated protein FlgL [Halomonas elongata DSM 2581] Length = 405 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 59/403 (14%), Positives = 124/403 (30%), Gaps = 51/403 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++FE+ D + + +++ +G+ + + Q K + Sbjct: 3 ISTVTMFEQSVSSMNRQQSDFLDVSQQIASGRRVVNPSDDPQAASRAVGVGQAKAVTEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 S LS ++ L+S+ V LV + A LR YE+ V Sbjct: 63 GDSRVSARNALSQGESVLNSVSDAVTSAKTLLVQASSDTLSDADRESVASELRGVYETLV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN-------GYFTKDSLAKKSFDQML----------- 166 AN TD G+YLF G P Y + ++ D Sbjct: 123 GQANATDGNGRYLFGGYEDGSPPFVENGDGHMEYVGSTEVRRQRIDASRVMEVSDSGQEI 182 Query: 167 -------QGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASD 219 G++ E + + D+ K+ E F++D + +A Sbjct: 183 FRSVPSGAGYVAEAAAGNDGSLTFKGPQTLDADADDYGKRFEISFAEDGGTLSYSVSADG 242 Query: 220 HNI-------------------------KYRIKDTEGIDVSANVNMRGIRDIMFVAVIGT 254 + + D+ + + +++ + + + Sbjct: 243 APVAGMQDVAYQAGDSLRFGGLSMELKGEPADGDSLTVGPAESMDPDLFQTLEKAIGVLE 302 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 + AR + + L ++ RA +G ++ N+ + Sbjct: 303 NPAETSREKAARGNTLNTAMRELDHSLDNVLTVRASMGARLNELDVVDSVSDNRMLNYEQ 362 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S + ++ A ++ S ++ S L+ +S+ YL Sbjct: 363 TLSDLVDLDYAEAISEYSLRQIGMQASQKTFADLKGMSLFQYL 405 >gi|253702424|ref|YP_003023613.1| flagellar hook-associated protein 3 [Geobacter sp. M21] gi|251777274|gb|ACT19855.1| flagellar hook-associated protein 3 [Geobacter sp. M21] Length = 306 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 97/346 (28%), Gaps = 63/346 (18%) Query: 19 TKELNKDSVKLHEEMVTG----QSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 ++ L E++ +G + SD L +L+ +++ + + + Sbjct: 16 LQKGRSSIDSLQEQVASGFNINRPSDDPLS----ARQLLDLQEQIAAGDQYSSNITKADL 71 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG 134 L + L+SM ++Q + ++ G D L + N Sbjct: 72 LLDVTSTALTSMAGLLQQVKKIAGDMVSGTQDATTVSGAVTNLTQLKSQLIDMGNTRVGD 131 Query: 135 QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 QY+F+G P S + + N + +AG L Sbjct: 132 QYVFAGFK--NSPPFDTLGNFSGTDDLVNVEIA--PGSNVATNVAGGKL----------- 176 Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDV---SANVNMRGIRDIMFVAV 251 A S A+ + E ID + N N + Sbjct: 177 ---------LLGGTPPAAVGSGATAG--TSPVNILETIDALILAINGNDKA--------- 216 Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + DG +N + + + ++ + + N N Sbjct: 217 --------GIADGVKNAAAAAQQV---------ATAISDVAGRQVRLDNMKTMIGNNQNT 259 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + V+ LS + T KL +LS+L+Y+ Sbjct: 260 LKNIYGDIQNVDYAKIGVLLSQKTTAFNAALSATAKLSQLSLLDYM 305 >gi|254522599|ref|ZP_05134654.1| flagellar hook-associated protein 3 [Stenotrophomonas sp. SKA14] gi|219720190|gb|EED38715.1| flagellar hook-associated protein 3 [Stenotrophomonas sp. SKA14] Length = 400 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 52/397 (13%), Positives = 115/397 (28%), Gaps = 43/397 (10%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 ++ ISTS +F + L L +++ TG + + ++ Sbjct: 1 MSSRISTSMMFNQSVSLMMAKQAKLSHLEQQIATGSKIVSAKDDPVAAGAAVGLDRSLAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + V RL + L+ + ++ + + L Sbjct: 61 LDRMKLNAGNVQNRLGVQENTLAQVNDLMARVNDLTIQASNPALSAPDKKTLITELNQIR 120 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTK------------DSLAKKSFDQMLQG 168 + ++ AN D G+Y+F G N + P K + L G Sbjct: 121 DGLLSLANADDGTGRYVFGGTNDGDPPFAKINGKVVYRGDQTQRQIEVGPDTYVRDALPG 180 Query: 169 --FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASD------- 219 + + I + + + ++ ++ A Sbjct: 181 SEIFMRIPTGDGFVDGGAAAGNTGNGVLTNITRDGSDSWNGQAFSIRFTAADQYQVLDGA 240 Query: 220 -----------------HNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLT 262 + ++ +I S NV RDI L + Sbjct: 241 GNVTGTGTYKAGDNVEVNGVRLQITGAPAAGDSFNVTPASSRDIFDTMDKLIAALDADTG 300 Query: 263 D----GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 A+ + L V + +I+ RA G K ++ + + T +S+ Sbjct: 301 TTAKMSAQQNELQSALRDVARASERMIDSRAAGGAQLKALDNAADMREANGVTLKTTLSQ 360 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ A +Q ++ + I +++Q +S+ N Sbjct: 361 MRDLDYADALSQYQLQSTALQAAQTIFSQMQSMSLFN 397 >gi|188580159|ref|YP_001923604.1| hypothetical protein Mpop_0891 [Methylobacterium populi BJ001] gi|179343657|gb|ACB79069.1| conserved hypothetical protein [Methylobacterium populi BJ001] Length = 597 Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 26/213 (12%), Positives = 68/213 (31%), Gaps = 9/213 (4%) Query: 153 TKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN 212 T S + + L + + ++ +++ + S Sbjct: 385 TLQSALTSAANTELSASSTARAALNFFEGSP-AAGLSPRRVAADGNGYAEAASAKTVIWY 443 Query: 213 NWSNASDHNIKYRI--KDTEGIDVSANVNMRGIRDIMFVAVIGTE----FLSKNLTDGAR 266 ASD + + + + A N IR + + + Sbjct: 444 KGDTASDPRASATVQAGASRTVAIGAQANEEAIRRTLAGLAAVAAESFTTATGTVDTARF 503 Query: 267 NVLTKKMLSTV--QQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQ 324 ++ + S + +G + + G++ ++ + + + V Sbjct: 504 EAVSGRAASLLTASEGQQSLEQLGTDFGLAASSMANAKSVANTTKATLQDSLDGVDTVST 563 Query: 325 HTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 A+L +L +++ SY +T+ L ++S++NYL Sbjct: 564 EEVAAKLLSLQTQLQASYKVTSILSEMSLVNYL 596 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 63/180 (35%), Gaps = 1/180 (0%) Query: 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHI 62 T+ + + F+R + + L ++ TG++++ LG T+ L + Sbjct: 4 TSFAAGTYRFDRQSASLVSMKSQLDGLARQLSTGRTAETYGGLGVGRTTSLSAHAAISAQ 63 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 L + + R+ + A L+ ++ + L ++ + + ++ Sbjct: 64 DGYLAAITSAETRVKLTSASLTQLKSLSDSTRSNLTGIV-ASRNEALPATTVQLAANNLS 122 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 + V N G Y+FSG + +P+ + L+ + E + L Sbjct: 123 AAVDALNQQAGGVYVFSGRATDTEPVVSQDAILNGVPAEGLDGLRTLIAEQKAADLGPLG 182 >gi|212634355|ref|YP_002310880.1| flagellar hook-associated protein FlgL [Shewanella piezotolerans WP3] gi|212555839|gb|ACJ28293.1| Flagellin [Shewanella piezotolerans WP3] Length = 400 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 57/407 (14%), Positives = 139/407 (34%), Gaps = 64/407 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSS-----DYGLQLGARVTSILEWEQEKN 60 IST+ +F + + + K+ E++ +G+ D +G +Q+ Sbjct: 3 ISTAQMFNQTTTNVMKSQSATSKIMEQLASGKKVSTAGDDPVAAIGID-----NLKQQGA 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + + RL+ S++ + + + +V+ M ++ + G + A +R S Sbjct: 58 VVDQFIKNIDYASNRLAVSESKIGNAENVVESMREQMLRSVNGTLSDADRQTIADEMRGS 117 Query: 121 YESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 E ++ AN D G LF+G ++ +P F + S D ++ + + ++ + Sbjct: 118 LEELLSIANSKDESGNSLFAGFKTNTEPFA--FDNNGKVVYSGDSGIRDSVVASGVTVGS 175 Query: 180 GQHLEVSSMNAQQM-----TDFIKQLEDKFSDDEY----------------WANNWSNAS 218 + MNA ++ + KFS + + +N + Sbjct: 176 NIPGDSVFMNAANAIGDYSVNYSSTQQGKFSVESAKITDPTLPVTGNYTFDFVDNGAGGL 235 Query: 219 DHNIKYRIKDTEGI----------------------------DVSANVNMRGIRDIMFVA 250 D N+ I +++ N + Sbjct: 236 DVNVTDSAGTVTTIPNFDATQPLTVDGIELQLKGTPQAGDSFELAPEQNSNIFDTLNSAI 295 Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 + + L ++L+ V G + R+V G S K++ + + Sbjct: 296 ALLED--GSKLNSPQGQAEMAQLLNNVSSGQEQMATSRSVAGNSLKSLENYTSTHKEEQL 353 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +S ++ A + + + +K+ +S+ +YL Sbjct: 354 VNQSALSLLEDLDYAEAITEFEKQQMSLNAVSSVFSKVGSMSLFDYL 400 >gi|170768098|ref|ZP_02902551.1| flagellar hook-associated protein 3 [Escherichia albertii TW07627] gi|170122864|gb|EDS91795.1| flagellar hook-associated protein 3 [Escherichia albertii TW07627] Length = 317 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 112/348 (32%), Gaps = 40/348 (11%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITSSQAEWMKYGEQMSTGKRVVNPSDDPVAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ L + +Q +V G ++ A ++ + + Sbjct: 64 LTRTFATQKVSLEESVLGQVTTAIQSAQEKIVYASNGTLSDDDRASLATDIQGIRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN TD G+Y+F+G + P + + K+S Q + S + Sbjct: 124 LANTTDGNGRYIFAGYKTESAPFSETDGEYIGGKESIKQQVDA---SRSMVIGHTGDKIF 180 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 +++ + + E S+ N+ + D Sbjct: 181 NNITSNAVK-----------------------------------EPDGSSSETNLFAMLD 205 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 A + + K ++ L+ ++ RA LG + Sbjct: 206 SAIAA-LKIPVEESEVDKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLG 264 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 265 SDRALGQTQQMSDLVDVDWNATISSYVMQQTALQASYKAFTDMQGLSL 312 >gi|206603516|gb|EDZ39996.1| Flagellar hook-associated protein (FlgL) [Leptospirillum sp. Group II '5-way CG'] Length = 312 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 107/338 (31%), Gaps = 46/338 (13%) Query: 6 ISTSSIFERMNILTKELNK--DSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 I + + ++ + + ++ +G+ + R+ L + + Sbjct: 2 IRVTGLMTNREVIASHDQAIDNLYDVDRQISSGKQFETPGDAPGRMGESLRINRNLSVTR 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + + RL ++ L + ++ G + + + A L+ + E Sbjct: 62 RIIENAREGANRLKLMESILDQVGTLLIRAKGLAIRMANDTMTAEDRRVGAQELKRTLEQ 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 V+ AN QYLFSG N + P + K + ++ L E + + + Sbjct: 122 VVSLANTKAGEQYLFSGTNVTRPPFHFTDPKLNPGSVAY---LGNHRSETVQQGFSPRQR 178 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 E M + D RI D N + + Sbjct: 179 EAGLMPVTEAGD-----------------------------RILGNSAADPFGNKPLPVM 209 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 R + L++ + + + + + + E+ AVLG E+ I Sbjct: 210 RRFLLGL----------LSNDQPQ--ITRSIDELDRTIHSVTERAAVLGTRERAIRTTVD 257 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 L+ T S++ V+ A ++L+ N + +S Sbjct: 258 RLEKYTISQKTLKSQNEDVDVPKAVSKLALNQNFLALS 295 >gi|300696920|ref|YP_003747581.1| flagellar hook-filament junction protein protein 3 [Ralstonia solanacearum CFBP2957] gi|299073644|emb|CBJ53164.1| flagellar hook-filament junction protein protein 3 [Ralstonia solanacearum CFBP2957] Length = 316 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 117/353 (33%), Gaps = 42/353 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ F + + VKL +++ TG + + A + +L+ +Q ++ + Sbjct: 3 VSTAQFFAASTASMQSTQSNLVKLQQQISTGIALNSAGDNPAAMGQVLQLQQSQDTNDQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + RL++ + LS + +Q + +++ ++ Y+ + Sbjct: 63 QVNRDATNARLTSVSSALSDVISTLQQGKQSTIAANTSLLTDSQRVGILAQVKQQYQQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN D G LF G N + P A +Q + + + ++G + Sbjct: 123 SSANQRDASGVALFGGANGTTDPFVSSAGSVQYAGSGQPPTVQVAQDISMPNSVSGDSVF 182 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V R+ +T+ + S N + Sbjct: 183 V---------------------------------------RVPNTDASNPS--ANQSVFK 201 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + ++ ++ + + + + ++ + +G + I Sbjct: 202 TYENLITALSKPITTSADVTTMQAAVQTAQNNLDNAYQVALQAQVTVGTQQSQITTLNSS 261 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 N + ISK V+ +A +Q S ++ + T +Q LS+ Y+ Sbjct: 262 GSNFGEQLKEQISKLQSVDYTSAISQFSQQQVSLQAAQKTFTSMQGLSLFQYI 314 >gi|222053740|ref|YP_002536102.1| flagellar hook-associated protein 3 [Geobacter sp. FRC-32] gi|221563029|gb|ACM19001.1| flagellar hook-associated protein 3 [Geobacter sp. FRC-32] Length = 306 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 99/339 (29%), Gaps = 48/339 (14%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 ++ +L E++ +G + IL + + L + L+ Sbjct: 16 LQQGRSKLDQLQEQIASGSVINRPSDDPISTRQILAMQNGVTEGDQYLSNIEKGNIWLNI 75 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 + L+ M I+ + ++ TD N L + N QY+F Sbjct: 76 TNTALTGMSSIMAQVKTIASNMISTSTDANMIANATTNLTQLKNQLIDLGNTQIGNQYVF 135 Query: 139 SGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 G ++S P + ++ K +A ++ + Sbjct: 136 GGFDNSTAPFDASGVFSGT-------------DDPMKVDIARNSSVAINITGGDLLRGGT 182 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLS 258 S + ID + ++ Sbjct: 183 PAVGAGSGATAGTR---------------PADIIDS------------------IDKLIA 209 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 + A +++ + ++ I ++ + + ++ + + N N + IS Sbjct: 210 AITSSSAADIVDG--VKNMKASADQIAAAQSTVAGNMMRLDNAKTMIVNNQNTLKNIISS 267 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V+ A +LS E + T K+ +LS+L+Y+ Sbjct: 268 KQNVDYAKAATELSQQQTAFEAALSATAKISRLSLLDYI 306 >gi|218289684|ref|ZP_03493892.1| flagellar hook-associated protein 3 [Alicyclobacillus acidocaldarius LAA1] gi|218240141|gb|EED07325.1| flagellar hook-associated protein 3 [Alicyclobacillus acidocaldarius LAA1] Length = 322 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 110/354 (31%), Gaps = 38/354 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+T+ ++ + +N + E++ TG+ + V+ ++ E + I+ Sbjct: 3 ITTAMEQQQFLYNLENINTAMQNVQEQLSTGKVLNLPQDDPVAVSKDMDLASEMSQISAN 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKT-DNNKFPINAGMLRDSYESF 124 L + S ++ +Q+ + M +Q + LV + + A + + Sbjct: 63 LSTISSGLSWMNATQSAMQGMVTQLQQIQSNLVAAMNTSNQSSAGLQGYAETIAQLIQGV 122 Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 A+ T +YLF G + P T + + + G + Sbjct: 123 YQIADQTVGSRYLFGGQADNVAPTTYLKTSPNGT---------------PQVIPPGAGPQ 167 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + N DD AS N+ I + I V+ + Sbjct: 168 STPYNP--------------FDDAN-------ASPPNVNEIIGNQVSIRVTVTAYDIFLT 206 Query: 245 DIMFVAVIGTEFLSKNLT-DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + K+ L+ +Q L+ +I A LG + + + Sbjct: 207 SPGGGPNLQDTLNDIQTDLQSGNTAGLKQDLTNLQANLNQVINLNAALGARIQRMTAAQN 266 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L + G + Q ST E + + ++ ++++YL Sbjct: 267 QLTQYQTNLSNLKGGIEGADMAQVMTQFSTDQVIYEAALQMGAQILLPTLVSYL 320 >gi|289433984|ref|YP_003463856.1| flagellar hook-associated protein FlgL, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170228|emb|CBH26768.1| flagellar hook-associated protein FlgL, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313634356|gb|EFS00953.1| flagellar hook-associated protein 3 [Listeria seeligeri FSL N1-067] gi|313639050|gb|EFS04038.1| flagellar hook-associated protein 3 [Listeria seeligeri FSL S4-171] Length = 291 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 63/150 (42%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ + ++ + K ++ +G+ + Q IL + + + Sbjct: 3 ISTNQQANTIINQLNNVSGNLAKYQLQVSSGKKYESMSQNPGATAQILSYNHVLSQLNRE 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+T++ LSSM + + ++ + G +D N +A ++ + Sbjct: 63 KTDVTEAKSLLNTAETSLSSMTTSMNRVNALVLQAINGTSDKNNMSQSAEEIKGLLGVLL 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKD 155 + AN D+G+Y+FSG ++S KP T Sbjct: 123 SVANAEDDGRYVFSGSSTSVKPFTTDKTTG 152 >gi|89895773|ref|YP_519260.1| hypothetical protein DSY3027 [Desulfitobacterium hafniense Y51] gi|89335221|dbj|BAE84816.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 329 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 109/355 (30%), Gaps = 32/355 (9%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS + + + + KL ++ TGQ + + L ++ +++ + Sbjct: 3 ISNNMLSRNLLLNLWAAQGRIDKLQNQLSTGQKINRPSDDPVGTENSLRFKSNISYLNQL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY-ESF 124 + + T+ + M ++Q + + T N++ + D E Sbjct: 63 KANAKEGIAYMDTTDDTMGEMTSMIQRAKELAIRAMNTSTVNDEDRKKIAIEIDQIREHV 122 Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN +Y+F G ++ +P + Sbjct: 123 IELANTKVGSKYIFGGT-ANVEPF----------------------------PKGATEWQ 153 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 S + +E + + + W A T + + Sbjct: 154 GSDDTKKFQVGGDLSIEVSVNGHDLFGAGWEYAEVTIPAPTDPPTYEYKKGSGSGIAMFD 213 Query: 245 DIMFVAVIGTEFLSKNLTDGA--RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 + ++ E + DG + +LS ++ I + RA LG + ++ Sbjct: 214 TLAQLSKALNESNINGVDDGTGTEEDGVQVLLSKLELQADHISDVRAQLGARQNRMDSVY 273 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L + + + +S + + T + + + + TK+ + S+ ++L Sbjct: 274 TQLDSTSANLGDSLSTVLYADIAETLVNFKTQDSIYQAALSVGTKIIQPSLADFL 328 >gi|187730939|ref|YP_001880748.1| flagellar hook-associated protein FlgL [Shigella boydii CDC 3083-94] gi|187427931|gb|ACD07205.1| flagellar hook-associated protein 3 [Shigella boydii CDC 3083-94] Length = 317 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 56/356 (15%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGIRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNG----YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I D +AS+ N+ Sbjct: 175 -------TGDKIFDSITSNAVAEPDG--------SASETNL------------------- 200 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQG----LSGIIEQRAVLGISEKN 297 + + A + L +G L+ ++ RA LG Sbjct: 201 ----FAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSLNNVLTVRAELGTQLNE 256 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 257 LESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|307265480|ref|ZP_07547035.1| flagellar hook-associated protein 3 [Thermoanaerobacter wiegelii Rt8.B1] gi|306919434|gb|EFN49653.1| flagellar hook-associated protein 3 [Thermoanaerobacter wiegelii Rt8.B1] Length = 297 Score = 61.3 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 94/332 (28%), Gaps = 58/332 (17%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 K + TG+ V + L + + L + + LS Sbjct: 23 LQKNQNMLSTGKRISRPSDDPVAVAASLRIRTDMARNDAYTKNADDAKSWLDITDSALSQ 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 + ++Q V G + + N G+Y+F+G ++ Sbjct: 83 LNDLLQRTRELAVEGSNGTLTQEDMQKIVNEIEQLKAQMIQVGNTQYNGRYIFAGFKTTT 142 Query: 146 KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFS 205 +P + + S D + F + Sbjct: 143 QPFSE-----TNNSYSGDNGIIEFEMGPGGN----------------------------- 168 Query: 206 DDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGA 265 +I D NV+ G + ++ + L L G Sbjct: 169 -------------------KIAVNVTGDKVFNVDSTGTSQL----LVMMDNLKSALDSGD 205 Query: 266 RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 L+ +++ V + + ++ RA +G I+ + LQN N +SK+ + Sbjct: 206 HQALSN-LIADVDKQMENVLAVRAEVGAKSNRIDLIQNRLQNDNYNFTALLSKNEDADLA 264 Query: 326 TAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L N S ++ + S++++L Sbjct: 265 QVITNLQMDENVYRASLAAGARIIQPSLIDFL 296 >gi|251772403|gb|EES52970.1| probable flagellar hook-associated protein, FlgL [Leptospirillum ferrodiazotrophum] Length = 313 Score = 61.3 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 103/321 (32%), Gaps = 43/321 (13%) Query: 21 ELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQ 80 ++ + +++ +G +D ++ +L + + + + R++ + Sbjct: 19 RATENLYESEKQVSSGLRADTPGDAPEAMSEVLRVNRSLAVTGQIIQNAREGATRIALME 78 Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSG 140 + L+ + I+ G + G D+ I A E V AN QYLF G Sbjct: 79 SILTQIDNIMIRAKGLAIRQANGTMDSQDRRIAAEEAERLLEQTVALANTRGGEQYLFGG 138 Query: 141 INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQL 200 N S P + D ++ F QG + ++ + + M Sbjct: 139 TNISVPP---FLLSDPQKEEPFIVSYQGNHKSSTIQQGFTPSFRQAGLLKTTMAG----- 190 Query: 201 EDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKN 260 D D A + N+ + R + KN Sbjct: 191 -DTLLGDSK------RAPNANLAF----------------PAFRRFI--------LGLKN 219 Query: 261 LTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 D A + L + E+ AVLG E+ + L+ + S++ Sbjct: 220 NDDKAIQA----AIGEFDLALRKVSERSAVLGTYERALRSTISRLEKYRTDLKVLRSQTE 275 Query: 321 GVEQHTAHAQLSTLINKIEMS 341 V+ A ++++ N +E+S Sbjct: 276 DVDIPRAASRMALSQNLLEVS 296 >gi|170020521|ref|YP_001725475.1| flagellar hook-associated protein FlgL [Escherichia coli ATCC 8739] gi|169755449|gb|ACA78148.1| flagellar hook-associated protein 3 [Escherichia coli ATCC 8739] gi|320173536|gb|EFW48732.1| Flagellar hook-associated protein FlgL [Shigella dysenteriae CDC 74-1112] Length = 317 Score = 61.3 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 56/356 (15%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNG----YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I D +AS+ N+ Sbjct: 175 -------TGDKIFDSITSNAVAEPDG--------SASETNL------------------- 200 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQG----LSGIIEQRAVLGISEKN 297 + + A + L +G L+ ++ RA LG Sbjct: 201 ----FAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSLNNVLTVRAELGTQLNE 256 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 257 LESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|85712261|ref|ZP_01043312.1| Flagellin [Idiomarina baltica OS145] gi|85693888|gb|EAQ31835.1| Flagellin [Idiomarina baltica OS145] Length = 404 Score = 61.3 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 59/403 (14%), Positives = 137/403 (33%), Gaps = 53/403 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +F+R + K+ +++ + ++ + Sbjct: 3 ISTNLMFQRGLDSLQRSESALYKVQQQLTRQTKILSPSDDPIANSQVMNLNNALAQNEQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + +++ + L S+A+L + +Q V ++ G + A LR + V Sbjct: 63 MRNSTSLEANLRQSEANLDGVNSGLQRARELAVGVVNGSYSADDRKAVAKELRAIEKQLV 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDS--------------------LAKKSFDQ 164 AN D G+Y+F+G S ++P+ + S A + + Sbjct: 123 DQANARDAQGEYMFAGFQSRKEPMQYNASTQSYQYVSDQGARNIQLTPNLKLAANEPGSK 182 Query: 165 MLQGFLEENSKSLLAGQHL----------EVSSMNAQQMTDFIKQLEDKFSDDEYWANNW 214 + ++ +GQ+L + + QQ ++ + + D + Sbjct: 183 PFANVSQRVDINVESGQNLVGELRVSNREQFTDFTEQQQSNGNPRDFNISFDGAG-NYSI 241 Query: 215 SNASDHNIKY-------------RIKDTEGIDVSAN-----VNMRGIRD--IMFVAVIGT 254 + S +N+ I E SA+ N I I V+ + Sbjct: 242 DDTSGNNLASGAITDGKISFNGMDITLAEDASPSASDTIQISNGEPIGRNPITLVSDLAA 301 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 K G L + + + ++ +A +G + R L++ + + T Sbjct: 302 ALEGKGTN-GQWEDEASWALDDLNKAMDNVVGTQADIGARMNVMESARTQLRDADVVNQT 360 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ V+ + A +L + S + +++ +LS+ +Y+ Sbjct: 361 ARAELADVDYNEAVTELVKNETLYQASQQVFSRINQLSLFDYV 403 >gi|150388563|ref|YP_001318612.1| flagellar hook-associated protein 3 [Alkaliphilus metalliredigens QYMF] gi|149948425|gb|ABR46953.1| flagellar hook-associated protein 3 [Alkaliphilus metalliredigens QYMF] Length = 318 Score = 61.3 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 40/356 (11%), Positives = 102/356 (28%), Gaps = 45/356 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + M + + TG+ ++ L+ + + + Sbjct: 3 ITNNMMISSMMQNLNGNLLRMDQKQLQATTGKRIHKPSDDPIGISRSLKLRSDIKELEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L T++ + ++ V+ + V G ++ + + + Sbjct: 63 KKNVDDTISWLETTELAVHNVGAAVERLRELTVQASNGVLTEDETKKIKAEVVELKNQII 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNG---YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 + N T G+Y+FSG + +K N Y + + D + + Sbjct: 123 SLGNTTYGGKYVFSGKKTDQKLFNDAGEYNVSNLSIDHAPDAIDDKIKFNVGMGETIEIN 182 Query: 183 LEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG 242 + + + ++ IK E I+ Sbjct: 183 VVGFELFGGDEVSHEDDVVGVEGGEQA--------------GIIKMIEDIEAKLEAGDTA 228 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 LTD +N + R+ +G + Sbjct: 229 -----------------GLTDDLQN---------IDIYYDQYSTIRSEIGAKVNRMELVE 262 Query: 303 VFL-QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ N+++ SK + + QL N S I +++ + +++++L Sbjct: 263 NRIVDDRLNLMELQ-SKIEDADVAEVYMQLMAEENVYRSSLAIGSRIIQPTLMDFL 317 >gi|261341487|ref|ZP_05969345.1| flagellar hook-associated protein 3 [Enterobacter cancerogenus ATCC 35316] gi|288316283|gb|EFC55221.1| flagellar hook-associated protein 3 [Enterobacter cancerogenus ATCC 35316] Length = 305 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 112/353 (31%), Gaps = 51/353 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS+ + M KL E+M T + + T +++ +E++ I + Sbjct: 3 ISSLYNSDAMMAQLGVNGTRMSKLMEQMATQKRINVPSDDPVAATRLVQLNREQSAIKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + ++ LS +AH+++M + M L+ G + L +S V Sbjct: 63 QSNITGLSGSLSGQEAHVTAMSNQLLSMNDKLLAAANGTHSSEDMKGFGAELSSMLDSLV 122 Query: 126 TFANM-TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N + G YLFSG + KP+ T+ + QG ++ G ++ Sbjct: 123 ASINAQNESGGYLFSGTKTDTKPVVWDETQGK-------YVYQGNNGTRETTVANGVNV- 174 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 +++ +S + D + Sbjct: 175 --------------------TENTNVTAAFSGSGDD----------------------LE 192 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + + + ++ +M+S Q + LG + + Sbjct: 193 MLNKLKALSDKMQDPDVPVADYQDDINEMISLSGQTRDKVAALFTDLGGRQNRLTMLADA 252 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + D + + T L N ++++ + + +LS+ + L Sbjct: 253 HTDVSMANDQVVRDLSDADPATTSINLQLYTNSVQITNKAYSMISQLSLFSML 305 >gi|197120115|ref|YP_002140542.1| flagellar hook-filament junction protein FlgL [Geobacter bemidjiensis Bem] gi|197089475|gb|ACH40746.1| flagellar hook-filament junction protein FlgL [Geobacter bemidjiensis Bem] Length = 306 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 105/340 (30%), Gaps = 51/340 (15%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 ++ L E++ +G + + +L+ +++ N + + + L+ Sbjct: 16 LQKGRSSIDTLQEQVASGLNINKPSDDPLSSRQLLDLQEQINAGEQYSSNITKAGLLLNV 75 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 + L+SM ++Q + ++ G D L + N QY+F Sbjct: 76 TSTALTSMSGLLQQVKKIAGDMVSGTQDPTSVSGAVTNLTQLKSQLIDMGNTRVGDQYVF 135 Query: 139 SGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 +G + P + D ++ +A ++++ ++ Sbjct: 136 AGFK-NSPPFDNL-----GNFSGTDDLVN--------VEIAPGSNVATNVSGGKL----- 176 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDT-EGIDVSANVNMRGIRDIMFVAVIGTEFL 257 A S A+ I T + + ++ N N + Sbjct: 177 -----LLGGTPPAAVGSGATAGTSPVNILGTIDALILAINGNNKA--------------- 216 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 + DG +N V +S + + + ++ + + N N + Sbjct: 217 --GIADGVKNAAA--AAQQVSTAISDVAGR-------QVRLDNMKTMIGNNQNTLKNIYG 265 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V+ LS + T KL +LS+L+Y+ Sbjct: 266 DIQNVDYAKIGVLLSQKTTAFNAALSATAKLSQLSLLDYM 305 >gi|126697803|ref|YP_001086700.1| flagellar hook-associated protein [Clostridium difficile 630] gi|115249240|emb|CAJ67053.1| Flagellar hook-associated protein FlgL (or HAP3) [Clostridium difficile] Length = 310 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 77/218 (35%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST + ++ + K++ ++ T + + + IL + E + Sbjct: 3 VSTGMMSSSYLNSLQDNLQRLDKVNRQINTTKEINKLSDNPYKAIKILNSKSEIKTMETY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L T+ L + ++ D+ LV G +++ + + + Sbjct: 63 IENCKDTADWLETTDTSLDQLGNLLADIKKGLVSSGNGSYSDDEIKTISNSTNEKMKEIA 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N T EG+Y+FSG N+ P+ D F+ L +S S+ Q + V Sbjct: 123 NALNATHEGKYIFSGSNTGTPPVECVENADGSVSLKFNTSLNLNKLNDSLSVDVAQGISV 182 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIK 223 F D F + +N SD NIK Sbjct: 183 DYNVKLSSLGFDPTKTDPFEKLNNISKKLANPSDANIK 220 >gi|26247223|ref|NP_753263.1| flagellar hook-associated protein FlgL [Escherichia coli CFT073] gi|91210235|ref|YP_540221.1| flagellar hook-associated protein FlgL [Escherichia coli UTI89] gi|110641259|ref|YP_668989.1| flagellar hook-associated protein FlgL [Escherichia coli 536] gi|117623269|ref|YP_852182.1| flagellar hook-associated protein FlgL [Escherichia coli APEC O1] gi|191172449|ref|ZP_03033990.1| flagellar hook-associated protein 3 [Escherichia coli F11] gi|215486292|ref|YP_002328723.1| flagellar hook-associated protein FlgL [Escherichia coli O127:H6 str. E2348/69] gi|218557965|ref|YP_002390878.1| flagellar hook-associated protein FlgL [Escherichia coli S88] gi|227886559|ref|ZP_04004364.1| flagellar hook-associated protein FlgL [Escherichia coli 83972] gi|237706931|ref|ZP_04537412.1| flagellar hook-associated protein FlgL [Escherichia sp. 3_2_53FAA] gi|300974387|ref|ZP_07172599.1| flagellar hook-associated protein 3 [Escherichia coli MS 45-1] gi|300982572|ref|ZP_07176194.1| flagellar hook-associated protein 3 [Escherichia coli MS 200-1] gi|301051130|ref|ZP_07197961.1| flagellar hook-associated protein 3 [Escherichia coli MS 185-1] gi|306814068|ref|ZP_07448241.1| flagellar hook-associated protein FlgL [Escherichia coli NC101] gi|312968843|ref|ZP_07783050.1| flagellar hook-associated protein 3 [Escherichia coli 2362-75] gi|331646341|ref|ZP_08347444.1| flagellar hook-associated protein 3 [Escherichia coli M605] gi|26107624|gb|AAN79823.1|AE016759_97 Flagellar hook-associated protein 3 [Escherichia coli CFT073] gi|91071809|gb|ABE06690.1| flagellar hook-associated protein 3 [Escherichia coli UTI89] gi|110342851|gb|ABG69088.1| flagellar hook-associated protein 3 [Escherichia coli 536] gi|115512393|gb|ABJ00468.1| flagellar hook-associated protein FlgL [Escherichia coli APEC O1] gi|190907333|gb|EDV66931.1| flagellar hook-associated protein 3 [Escherichia coli F11] gi|215264364|emb|CAS08721.1| flagellar hook-filament junction protein [Escherichia coli O127:H6 str. E2348/69] gi|218364734|emb|CAR02424.1| flagellar hook-filament junction protein [Escherichia coli S88] gi|222032836|emb|CAP75575.1| flagellar hook-associated protein 3 [Escherichia coli LF82] gi|226898141|gb|EEH84400.1| flagellar hook-associated protein FlgL [Escherichia sp. 3_2_53FAA] gi|227836763|gb|EEJ47229.1| flagellar hook-associated protein FlgL [Escherichia coli 83972] gi|294494044|gb|ADE92800.1| flagellar hook-associated protein 3 [Escherichia coli IHE3034] gi|300297214|gb|EFJ53599.1| flagellar hook-associated protein 3 [Escherichia coli MS 185-1] gi|300307153|gb|EFJ61673.1| flagellar hook-associated protein 3 [Escherichia coli MS 200-1] gi|300410630|gb|EFJ94168.1| flagellar hook-associated protein 3 [Escherichia coli MS 45-1] gi|305852705|gb|EFM53153.1| flagellar hook-associated protein FlgL [Escherichia coli NC101] gi|307553085|gb|ADN45860.1| flagellin [Escherichia coli ABU 83972] gi|307627447|gb|ADN71751.1| flagellar hook-associated protein FlgL [Escherichia coli UM146] gi|312286245|gb|EFR14158.1| flagellar hook-associated protein 3 [Escherichia coli 2362-75] gi|312945645|gb|ADR26472.1| flagellar hook-associated protein FlgL [Escherichia coli O83:H1 str. NRG 857C] gi|315287425|gb|EFU46836.1| flagellar hook-associated protein 3 [Escherichia coli MS 110-3] gi|315291061|gb|EFU50424.1| flagellar hook-associated protein 3 [Escherichia coli MS 153-1] gi|315296714|gb|EFU56009.1| flagellar hook-associated protein 3 [Escherichia coli MS 16-3] gi|320196435|gb|EFW71058.1| Flagellar hook-associated protein FlgL [Escherichia coli WV_060327] gi|323953231|gb|EGB49097.1| flagellar hook protein 3 [Escherichia coli H252] gi|323957907|gb|EGB53619.1| flagellar hook protein 3 [Escherichia coli H263] gi|324007923|gb|EGB77142.1| flagellar hook-associated protein 3 [Escherichia coli MS 57-2] gi|324013282|gb|EGB82501.1| flagellar hook-associated protein 3 [Escherichia coli MS 60-1] gi|330910897|gb|EGH39407.1| flagellar hook-associated protein FlgL [Escherichia coli AA86] gi|331045093|gb|EGI17220.1| flagellar hook-associated protein 3 [Escherichia coli M605] Length = 317 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 107/352 (30%), Gaps = 48/352 (13%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEADGDYVGGTESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I D N D I Sbjct: 175 -------TGDKIFDSITSNAVAEPDGSASETNLFAMLDSAI------------------- 208 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 A + T K ++ L+ ++ RA LG + Sbjct: 209 --------AALKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESL 260 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 261 DSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|332758244|gb|EGJ88567.1| flagellar hook-associated protein 3 [Shigella flexneri 4343-70] Length = 311 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 105/344 (30%), Gaps = 56/344 (16%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 + +K E+M TG+ + + Q + ++ + + T+++S Sbjct: 10 ITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLARTFATQKVSL 69 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYL 137 ++ LS + +Q+ +V G ++ A ++ + + AN TD G+Y+ Sbjct: 70 EESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLANTTDGNGRYI 129 Query: 138 FSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQM 193 F+G + P + Y K+ D + ++ Sbjct: 130 FAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGH----------------TGDKI 173 Query: 194 TDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIG 253 D I D +AS+ N+ + Sbjct: 174 FDSITSNAVAEPDG--------SASETNL-----------------------FAMLDSAI 202 Query: 254 TEFLSKNLTDGARNVLTKKMLSTVQQGL----SGIIEQRAVLGISEKNINEERVFLQNKN 309 + A + L +GL + ++ RA LG + ++ Sbjct: 203 AALKTPVADSEADKEIAAAALDKTNRGLKNSLNNVLTVRAELGTQLNKLESLDSLGSDRA 262 Query: 310 NIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 +S + V+ + + ++ SY T +Q LS+ Sbjct: 263 LGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 306 >gi|220922289|ref|YP_002497591.1| hypothetical protein Mnod_2312 [Methylobacterium nodulans ORS 2060] gi|219946896|gb|ACL57288.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 599 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 3/191 (1%) Query: 13 ERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLV 72 ++ + L ++ TG+ S+ LG+ + L + + + + L Sbjct: 16 NTRRLVALKGQ--LNDLSGQLATGRVSETYGGLGSGRGTSLNAHAQLSALDGYDAAIDLG 73 Query: 73 TKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD 132 R+ + A + + D L + + + + + + FV N + Sbjct: 74 RIRIDLASAGVGQAATLASDTWNQLSNTVAQVGGSARLSLKS-IAEGRLGGFVDALNQSS 132 Query: 133 EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQ 192 GQYLF G + P+ + + + + E + L ++ Q Sbjct: 133 AGQYLFGGRVTDIAPVETADKILNGDPAAALDGIGAVIAERQAADLGTGTPRTGRLSLTQ 192 Query: 193 MTDFIKQLEDK 203 + E Sbjct: 193 AGAALTLSESA 203 Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 75/219 (34%), Gaps = 13/219 (5%) Query: 145 EKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKF 204 L + A + F ++ LA + + + + A Sbjct: 388 SAALEDAAANELTASSATRAA-SDFFAGSASPGLAPRRVALDAAGAA------TGYVADP 440 Query: 205 SDDEYWANNWSNASD---HNIKYRIKDTEGIDVSANVNMRGIRD-IMFVAVIGTEFLSKN 260 SD +AS + ++ E + V N +R+ + +AV + + + Sbjct: 441 SDRTVIWYRGDDASADPRQTLSLKVSSGESVAVGLQANEPALRNALAGIAVAASVGFTDD 500 Query: 261 LTDGARNVLTKKMLSTVQQGLSGIIEQR--AVLGISEKNINEERVFLQNKNNIIDTYISK 318 D AR L + Q +G ++ L ++ I ++ ++ + Sbjct: 501 KADDARFAAFADRLKSFLQPDAGQTIEQINTDLSLASSRIQTQKSQNSATRLVLQNSLDG 560 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V A+L T+ +++ SY T L KLS+ NYL Sbjct: 561 IESVSNEEVAAKLLTIQTQLQASYQTTATLAKLSLANYL 599 >gi|190574256|ref|YP_001972101.1| flagellar hook-associated protein FlgL [Stenotrophomonas maltophilia K279a] gi|190012178|emb|CAQ45801.1| putative flagellar hook-associated protein [Stenotrophomonas maltophilia K279a] Length = 400 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 54/397 (13%), Positives = 118/397 (29%), Gaps = 43/397 (10%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 ++ ISTS +F + L L +++ TG + + ++ Sbjct: 1 MSSRISTSMMFNQSVSLMMAKQAKLSHLEQQIATGSKIVSAKDDPVAAGAAVGLDRSLAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + V RL + L+ + ++ + + L Sbjct: 61 LDRMKLNAGNVQNRLGVQENTLAQVNDLMARVNDLTIQASNPALGAADKKTLITELNQIR 120 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTK------------DSLAKKSFDQMLQG 168 E ++ AN D G+Y+F G N + P K + L G Sbjct: 121 EGLLSLANADDGTGRYVFGGTNDGDPPFAKINGKVVYRGDQTQRQIEVGPDTYVRDALPG 180 Query: 169 --FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASD------- 219 + +S + I + + + ++ ++ A Sbjct: 181 SEIFMRIPTGDGFVDGVAAASNTGNGVLTNITRDGSDSWNGQSFSIRFTAADQYQVLDGA 240 Query: 220 -----------------HNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLT 262 + ++ +I S NV RDI L + Sbjct: 241 GNVTGTGTFKAGDNVEVNGVRLQITGAPAAGDSFNVKPATSRDIFDTMDKLIAALDADTG 300 Query: 263 D----GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 A+ + L V + +I+ RA G K ++ + + + T +S+ Sbjct: 301 TTAKMSAQQNELQSALRDVARASERMIDSRAAGGAQLKALDNAADMREANSVTLKTTLSQ 360 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ A +Q ++ + I +++Q +S+ N Sbjct: 361 MRDLDYADALSQYQLQSTALQAAQTIFSQMQSMSLFN 397 >gi|192292819|ref|YP_001993424.1| hypothetical protein Rpal_4453 [Rhodopseudomonas palustris TIE-1] gi|192286568|gb|ACF02949.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 535 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 71/210 (33%), Gaps = 10/210 (4%) Query: 153 TKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN 212 LA S + F +AG Q+ ++ + + Sbjct: 331 ANGPLAAASAIKAGDDFFNNTPPLRVAGTAP--FGAATAQVAGTKANTIFWYNGEP---D 385 Query: 213 NWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF---LSKNLTDGARNVL 269 + S+ + +I D + A + + +R + + + + G L Sbjct: 386 SASDPARGTAVAKIDDAITVQYGARADEQALRKQLQTVAVFAAVTTSATDPYSSGKIAAL 445 Query: 270 TKKMLSTVQ--QGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 +++ + + G I +A L ++ +I + T +S G+ Sbjct: 446 NQRVAANLAVVPGQQSIQNMQAELAGAQASIKATANRQTQSKALAQTMLSSIEGINNDEV 505 Query: 328 HAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ L ++ SY T+KL +LS++ +L Sbjct: 506 ATKILALQTSLQASYETTSKLYQLSLVKFL 535 Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 66/192 (34%), Gaps = 7/192 (3%) Query: 17 ILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRL 76 L L +++ +G+ S+ G + + + ++IA + + +T R+ Sbjct: 15 TGILNLRSQLENLSQQLSSGRISNTYAGDGTGRSLAIGLRAQMSNIASYSDTMTNITTRI 74 Query: 77 STSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQY 136 S + L M I ++ G V + + P D ++S V N +Y Sbjct: 75 SVANLSLQRMATINSEVKGAAVSAGSTLDNTGQTPGQKTASLDFFDS-VDMLNAQVGDRY 133 Query: 137 LFSGINSSEKPLNGYF---TKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQM 193 LF G + P+ D A Q++ + + + G+ + + A + Sbjct: 134 LFGGRITDTAPVTAADKIMNGDGAAVAGLKQVISERHDADVGTNGMGRTIVSTGATATTV 193 Query: 194 T---DFIKQLED 202 DF Sbjct: 194 QIGEDFAANPYA 205 >gi|74311644|ref|YP_310063.1| flagellar hook-associated protein FlgL [Shigella sonnei Ss046] gi|188494376|ref|ZP_03001646.1| flagellar hook-associated protein 3 [Escherichia coli 53638] gi|194438084|ref|ZP_03070177.1| flagellar hook-associated protein 3 [Escherichia coli 101-1] gi|218553661|ref|YP_002386574.1| flagellar hook-associated protein FlgL [Escherichia coli IAI1] gi|253773893|ref|YP_003036724.1| flagellar hook-associated protein FlgL [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161189|ref|YP_003044297.1| flagellar hook-associated protein FlgL [Escherichia coli B str. REL606] gi|300928365|ref|ZP_07143899.1| flagellar hook-associated protein 3 [Escherichia coli MS 187-1] gi|331652136|ref|ZP_08353155.1| flagellar hook-associated protein 3 [Escherichia coli M718] gi|73855121|gb|AAZ87828.1| flagellar hook-filament junction protein [Shigella sonnei Ss046] gi|188489575|gb|EDU64678.1| flagellar hook-associated protein 3 [Escherichia coli 53638] gi|194423020|gb|EDX39014.1| flagellar hook-associated protein 3 [Escherichia coli 101-1] gi|218360429|emb|CAQ97983.1| flagellar hook-filament junction protein [Escherichia coli IAI1] gi|253324937|gb|ACT29539.1| flagellar hook-associated protein 3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973090|gb|ACT38761.1| flagellar hook-associated protein L [Escherichia coli B str. REL606] gi|253977304|gb|ACT42974.1| flagellar hook-associated protein L [Escherichia coli BL21(DE3)] gi|300463623|gb|EFK27116.1| flagellar hook-associated protein 3 [Escherichia coli MS 187-1] gi|313848603|emb|CAQ31604.2| flagellar biosynthesis; hook-filament junction protein, subunit of Flagellum [Escherichia coli BL21(DE3)] gi|323165593|gb|EFZ51380.1| flagellar hook-associated protein 3 [Shigella sonnei 53G] gi|323947615|gb|EGB43619.1| flagellar hook-associated protein 3 [Escherichia coli H120] gi|323962682|gb|EGB58260.1| flagellar hook protein 3 [Escherichia coli H489] gi|323973328|gb|EGB68517.1| flagellar hook protein 3 [Escherichia coli TA007] gi|331050414|gb|EGI22472.1| flagellar hook-associated protein 3 [Escherichia coli M718] gi|332342629|gb|AEE55963.1| flagellar hook-associated protein FlgL [Escherichia coli UMNK88] Length = 317 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 107/352 (30%), Gaps = 48/352 (13%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I D N D I Sbjct: 175 -------TGDKIFDSITSNAVAEPDGSASETNLFAMLDSAI------------------- 208 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 A + T K ++ L+ ++ RA LG + Sbjct: 209 --------AALKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESL 260 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 261 DSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|322380051|ref|ZP_08054312.1| flagellar hook-associated protein FlgL [Helicobacter suis HS5] gi|321147520|gb|EFX42159.1| flagellar hook-associated protein FlgL [Helicobacter suis HS5] Length = 843 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 73/234 (31%), Gaps = 9/234 (3%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ S+ + ++N L + ++ +G S+YG Q L++ E N + + Sbjct: 3 ITDSNRYNQINYYQNALQNKLNTANNKIASGLKSEYGYQNSQVNNQNLKYGFETNTLDQA 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L + +Q L+ A L + Sbjct: 63 HDVAKSAYTATLNTDKALGELSSTMQQFKVKLIQAASDVHSTTSRQAIALDLEKLKNHMI 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLN---GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 AN + G+YLF G P + Y+ D + +L G+ Sbjct: 123 NVANTSIGGEYLFGGSKVDRPPFDAAGNYYGNDENLNALVGSHNLVPYNISGTNLFLGKD 182 Query: 183 LEVSSMNAQQMTDFIK-----QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEG 231 + + + F + + D F+ + + A D ++ I D + Sbjct: 183 ADKQTSIIANIKKFNQSKLHPDIMDSFNKTQNPQEVYITAQDT-LRDLIGDNDN 235 Score = 37.4 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 33/84 (39%), Gaps = 3/84 (3%) Query: 274 LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLST 333 + + + +I S N+ L+ + + I ++G + + + + Sbjct: 763 VDHLGDHIEKVIASNGAHSRSFSNVMRRNEVLKTQVDSIRA---DTVGTDVAQTYNKFAQ 819 Query: 334 LINKIEMSYMITTKLQKLSILNYL 357 L N S +K+ ++S+ NYL Sbjct: 820 LRNNYNASLASASKINQMSLTNYL 843 >gi|331657145|ref|ZP_08358107.1| flagellar hook-associated protein 3 [Escherichia coli TA206] gi|331055393|gb|EGI27402.1| flagellar hook-associated protein 3 [Escherichia coli TA206] Length = 317 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 108/348 (31%), Gaps = 40/348 (11%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN TD G+Y+F+G + P + K S Q + V Sbjct: 124 LANTTDGNGRYIFAGYKTESAPFSEADGKYEGGADSIKQQVDA------------SRSMV 171 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++ D I D N D I Sbjct: 172 IGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAI----------------------- 208 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 A + T K ++ L+ ++ RA LG + Sbjct: 209 ----AALKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLGSLG 264 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY + T +Q LS+ Sbjct: 265 SDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKVFTDMQGLSL 312 >gi|39936991|ref|NP_949267.1| hypothetical protein RPA3930 [Rhodopseudomonas palustris CGA009] gi|39650848|emb|CAE29371.1| unknown protein [Rhodopseudomonas palustris CGA009] Length = 535 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 71/210 (33%), Gaps = 10/210 (4%) Query: 153 TKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN 212 LA S + F +AG Q+ ++ + + Sbjct: 331 ANGPLAAASAIKAGDDFFNNTPPLRVAGTAP--FGAATAQVAGTKANTIFWYNGEP---D 385 Query: 213 NWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF---LSKNLTDGARNVL 269 + S+ + +I D + A + + +R + + + + G L Sbjct: 386 SASDPARGTAVAKIDDAITVQYGARADEQALRKQLQTVAVFAAVTTSATDPYSSGKIAAL 445 Query: 270 TKKMLSTVQ--QGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 +++ + + G I +A L ++ +I + T +S G+ Sbjct: 446 NQRVAANLAVVPGQQSIQNMQAELAGAQASIKATANRQTQSKALAQTMLSSIEGINNDEV 505 Query: 328 HAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ L ++ SY T+KL +LS++ +L Sbjct: 506 ATKILALQTSLQASYETTSKLYQLSLVKFL 535 Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 66/192 (34%), Gaps = 7/192 (3%) Query: 17 ILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRL 76 L L +++ +G+ S+ G + + + ++IA + + +T R+ Sbjct: 15 TGILNLRSQLENLSQQLSSGRISNTYAGDGTGRSLAIGLRAQMSNIASYSDTMTNITTRI 74 Query: 77 STSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQY 136 S + L M I ++ G V + + P D ++S V N +Y Sbjct: 75 SVANLSLQRMATINSEVKGAAVSAGSTLDNTGQTPGQKTASLDFFDS-VDMLNAQVGDRY 133 Query: 137 LFSGINSSEKPLNGYF---TKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQM 193 LF G + P+ D A Q++ + + + G+ + + A + Sbjct: 134 LFGGRITDTAPVTAADKIMNGDGAAVAGLKQVISERHDADVGTNGMGRTIVSTGATATTV 193 Query: 194 T---DFIKQLED 202 DF Sbjct: 194 QIGEDFAANPYA 205 >gi|127512286|ref|YP_001093483.1| flagellar hook-associated protein FlgL [Shewanella loihica PV-4] gi|126637581|gb|ABO23224.1| flagellar hook-associated protein 3 [Shewanella loihica PV-4] Length = 396 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 52/396 (13%), Positives = 131/396 (33%), Gaps = 46/396 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +F + + K+ +++ +G+ + I Q+ + + Sbjct: 3 ISTAQMFNQNINSVLNKQSATSKIIDQIASGKRVNTAGDDPVAAIGIDNLNQQNALVDQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T RL+ +++ L + + + + ++ + G +++ + A L+ + E V Sbjct: 63 MKNIDYATNRLALTESKLGTAETLTGSVREQILRAVNGSLSDSERQMIADELKGTLEELV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFT------KDSLAKKSFDQMLQGFLEENSK--- 175 + AN D G Y+F+G + +P DS +++ Sbjct: 123 SVANTKDESGNYMFAGYETGNQPFAFNAAGNVVYSGDSGVRQAIVASGVTLGTNVPGDQA 182 Query: 176 --SLLAGQHLEVSSMNAQQMTDF------IKQLEDKFSDDEYWANNWSNA----SDHNIK 223 + +G ++ + Q DF I D + N +N S + Sbjct: 183 FMNAPSGLGDFSANYLSTQTGDFRVLSAAISDPATYVDDTYSFTMNGANLEIRDSSATLV 242 Query: 224 YRIKD----------------------TEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNL 261 + + + ++ + I + + N Sbjct: 243 TTVPNFDAANPINFNGIEVKLDGQPAPGDTFSITPQSQVSVFDTINQAITLLEDPNKVNT 302 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 G +ML+ + G++ + R G S K I + + + +S Sbjct: 303 PQG--KAELAQMLNNIDSGVNQLSTARGEAGNSLKQIERYSSTHVEEKLVNSSALSMLED 360 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ +A +L + + +K+ ++ +Y+ Sbjct: 361 LDYASAITELEKQQLALNAVSSVFSKVGSTTLFDYI 396 >gi|315301956|ref|ZP_07872953.1| flagellar hook-associated protein 3 [Listeria ivanovii FSL F6-596] gi|313629674|gb|EFR97810.1| flagellar hook-associated protein 3 [Listeria ivanovii FSL F6-596] Length = 215 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 63/150 (42%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ + ++ + K ++ +G+ + Q IL + + + Sbjct: 3 ISTNQQANTIINQLNNVSGNLAKYQLQVSSGKKYESMSQNPGATAQILSYNHVLSQLNRE 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+T++ LSSM + + ++ + G +D N +A ++ + Sbjct: 63 KTDVTEAKSLLNTAETSLSSMTTSMNRVNALVLQAINGTSDKNNMSQSAEEIKGLLGVLL 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKD 155 + AN D+G+Y+FSG ++S KP T Sbjct: 123 SVANAEDDGRYVFSGSSTSVKPFTTDKTTG 152 >gi|256018660|ref|ZP_05432525.1| flagellar hook-associated protein FlgL [Shigella sp. D9] gi|260854566|ref|YP_003228457.1| flagellar hook-filament junction protein FlgL [Escherichia coli O26:H11 str. 11368] gi|260867446|ref|YP_003233848.1| flagellar hook-filament junction protein FlgL [Escherichia coli O111:H- str. 11128] gi|293433373|ref|ZP_06661801.1| flagellar hook-associated protein 3 [Escherichia coli B088] gi|300816785|ref|ZP_07097005.1| flagellar hook-associated protein 3 [Escherichia coli MS 107-1] gi|332279729|ref|ZP_08392142.1| flagellar hook-associated protein FlgL [Shigella sp. D9] gi|257753215|dbj|BAI24717.1| flagellar hook-filament junction protein FlgL [Escherichia coli O26:H11 str. 11368] gi|257763802|dbj|BAI35297.1| flagellar hook-filament junction protein FlgL [Escherichia coli O111:H- str. 11128] gi|291324192|gb|EFE63614.1| flagellar hook-associated protein 3 [Escherichia coli B088] gi|300530559|gb|EFK51621.1| flagellar hook-associated protein 3 [Escherichia coli MS 107-1] gi|323156890|gb|EFZ43024.1| flagellar hook-associated protein 3 [Escherichia coli EPECa14] gi|323175238|gb|EFZ60851.1| flagellar hook-associated protein 3 [Escherichia coli LT-68] gi|323175685|gb|EFZ61279.1| flagellar hook-associated protein 3 [Escherichia coli 1180] gi|323185794|gb|EFZ71155.1| flagellar hook-associated protein 3 [Escherichia coli 1357] gi|324117346|gb|EGC11253.1| flagellar hook protein 3 [Escherichia coli E1167] gi|332102081|gb|EGJ05427.1| flagellar hook-associated protein FlgL [Shigella sp. D9] Length = 317 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 112/352 (31%), Gaps = 48/352 (13%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN TD G+Y+F+G + P + K +S Q + V Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIRQQVDA------------SRSMV 171 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++ D I D +AS+ N+ Sbjct: 172 IGHTGDKIFDSITSNAVAEPDG--------SASETNL----------------------- 200 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQG----LSGIIEQRAVLGISEKNINEE 301 + + A + L +G L+ ++ RA LG + Sbjct: 201 FAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESL 260 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 261 DSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|299822282|ref|ZP_07054168.1| flagellar hook-associated protein 3 [Listeria grayi DSM 20601] gi|299815811|gb|EFI83049.1| flagellar hook-associated protein 3 [Listeria grayi DSM 20601] Length = 291 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 60/144 (41%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+T+ + N K ++ TG+ + + A T +L + N + Sbjct: 3 IATNQQTNTIINQINNANVLMGKYQTQVSTGKRYETMSENPAATTQVLSYNHILNQLNRE 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 S L+++ LSSM + + ++ L G TD A ++ +S V Sbjct: 63 QKDVSDAKSLLTSADTSLSSMNDAMSRINAIVLQSLNGTTDEKNMNQAAEEVKGLLQSLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLN 149 + N D+G+Y+FSG +++ KP Sbjct: 123 SLGNTDDDGRYIFSGSSTNTKPFT 146 >gi|322378700|ref|ZP_08053132.1| flagellar hook-associated protein FlgL [Helicobacter suis HS1] gi|321148875|gb|EFX43343.1| flagellar hook-associated protein FlgL [Helicobacter suis HS1] Length = 843 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 73/234 (31%), Gaps = 9/234 (3%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ S+ + ++N L + ++ +G S+YG Q L++ E N + + Sbjct: 3 ITDSNRYNQINYYQNALQNKLNTANNKIASGLKSEYGYQNSQVNNQNLKYGFETNTLDQA 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L + +Q L+ A L + Sbjct: 63 HDVAKSAYTATLNTDKALGELSSTMQQFKVKLIQAASDVHSTTSRQAIALDLEKLKNHMI 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLN---GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 AN + G+YLF G P + Y+ D + +L G+ Sbjct: 123 NVANTSIGGEYLFGGSKVDRPPFDAAGNYYGNDENLNALVGSHNLVPYNISGTNLFLGKD 182 Query: 183 LEVSSMNAQQMTDFIK-----QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEG 231 + + + F + + D F+ + + A D ++ I D + Sbjct: 183 ADKQTSIIANIKKFNQSKLHPDIMDSFNKTQNPQEVYITAQDT-LRDLIGDNDN 235 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 33/84 (39%), Gaps = 3/84 (3%) Query: 274 LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLST 333 + + + +I S N+ L+ + + I ++G + + + + Sbjct: 763 VDHLGDHIEKVIASNGAHSRSFSNVMRRNEVLKTQVDSIRA---DTVGTDVAQTYNKFAQ 819 Query: 334 LINKIEMSYMITTKLQKLSILNYL 357 L N S +K+ ++S+ NYL Sbjct: 820 LRNNYNASLASASKINQMSLTNYL 843 >gi|89075503|ref|ZP_01161914.1| flagellar hook-associated protein [Photobacterium sp. SKA34] gi|89048775|gb|EAR54346.1| flagellar hook-associated protein [Photobacterium sp. SKA34] Length = 411 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 49/410 (11%), Positives = 135/410 (32%), Gaps = 61/410 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEW---EQEKNHI 62 +ST+S ++ + + + + ++ TG+ + G S + Q+ I Sbjct: 5 VSTASQYQSLTSNLMRKQGEVNESNNQLSTGKRVE---TAGDDPVSSVTIQNYRQQLTQI 61 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + S ++ RL ++ ++ ++ + ++ ++ G +N L + Sbjct: 62 DQYKSSITMANNRLGVMESSIAGVEDNLDATKQKVLRMINGAMASNDRTAFKDELTSLRD 121 Query: 123 SFVTFANMTD-EGQYLFSGINSSEKPLN-------GYFTKDSLAKKSFD-------QMLQ 167 + AN D G Y+F+G +P Y D + Sbjct: 122 GLLELANSRDESGNYVFAGNQMDTQPFVKGTDDKMNYQGDSQSRYAQIDKSVEVKTSLPG 181 Query: 168 GFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNA--------SD 219 L + + + S +++ + F+ + +S A Sbjct: 182 DQLFTSIPNPYGDFRPDFSDLSSGSKLHVLSATTSDFTKAQPIDIAFSEALVTQPDGSEK 241 Query: 220 HNIKYRIKDT--EGIDVSANVNMRGIRDIMFVAVIGT----------------------- 254 ++Y++ E + +GI+ + Sbjct: 242 TVMQYKLSLDGKEVVADQDYDPEKGIQYTAANGSSVSITLDDVEVGDKLTLNPAQKINIF 301 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGI-------IEQRAVLGISEKNINEERVFLQN 307 + L + + + + +T+Q+ + I ++R+ +G + + ++ + Sbjct: 302 DSLQDAIDNAEKPTSSAAAEATLQRVIDDIDGSFLHVSQRRSEVGTIMQQVERQQEQHLD 361 Query: 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +++ S ++ A +++ + ++ S +K ++LS+ NYL Sbjct: 362 FELTLNSAQSGLEDLDYSKAIMEMNQQMMALQASQSAFSKTKQLSLFNYL 411 >gi|304407694|ref|ZP_07389345.1| flagellar hook-associated protein 3 [Paenibacillus curdlanolyticus YK9] gi|304343177|gb|EFM09020.1| flagellar hook-associated protein 3 [Paenibacillus curdlanolyticus YK9] Length = 302 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 99/332 (29%), Gaps = 55/332 (16%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 ++ TG+ + +T L + E + + + + +L + + Sbjct: 25 MQGQQNDLSTGRKLNKPSDDPVGITYSLRYRSELSMNEQFDKNIAQAKSQLEHTDTVVGQ 84 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 + IVQ + V L G + A + YE +T N G+Y+F+G + + Sbjct: 85 LNDIVQRVQELSVQALNGTNPQSALDAIAVEVSQIYEQAITIGNDQLNGKYIFNGQKTDK 144 Query: 146 KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFS 205 P + + A++ DQ++Q + + ++ N L Sbjct: 145 IPFDAATAGTNAAEEPDDQLIQVRFAAGVTVPINVKAEDLFGSNGDA-----DNLFKVLK 199 Query: 206 DDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGA 265 D + + NL Sbjct: 200 DIKN-----------------------------------------ALTPAGNMANLQTAY 218 Query: 266 RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 +N + II R+ +G ++ LQ+ N + + SK+ + Sbjct: 219 QN---------LSTRYDKIINLRSEVGARVNRVDLIDQRLQDLNFNLTSLQSKTEDTDMA 269 Query: 326 TAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + S K+ ++++YL Sbjct: 270 ETIMKYNQEEAVYQASLSTGAKIISPTLIDYL 301 >gi|86750924|ref|YP_487420.1| hypothetical protein RPB_3815 [Rhodopseudomonas palustris HaA2] gi|86573952|gb|ABD08509.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 535 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 7/190 (3%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 L + ++ G+ + +G + + +IA + + + R+S Sbjct: 17 ILNLRSQIEDMTAQLANGRVATNYAGMGTGRGLAIGLRAQVANIASYSDTMTNINTRISV 76 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 + L + I ++ G + + P D ++S V N +YLF Sbjct: 77 ANLALQRLNDIGSEVKGAAASAGSTLDNTGQTPGQKTASLDFFDS-VDMLNSQTSDRYLF 135 Query: 139 SGINSSEKPLNGYF---TKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT- 194 SG + P+ + A Q+++ LE + + G+ + + + Sbjct: 136 SGRTTDTAPVTAADQIMDGNGAAIAGLKQVIRERLEADLGTTGMGRTIVSAGATPTSVQI 195 Query: 195 --DFIKQLED 202 DF Sbjct: 196 GEDFAADPYA 205 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 53/148 (35%), Gaps = 5/148 (3%) Query: 215 SNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARN---VLTK 271 S+ + R+ D + + + +R + + + N L + Sbjct: 388 SDPARGTAVGRVDDAITVQYGIRADEQALRKQLQTVAVFAAVTTSATDPNGSNKLAALNQ 447 Query: 272 KMLSTVQQ--GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 ++ + + G I +A L ++ + + T + G+ Sbjct: 448 RVAANLATVPGQQTIQNIQADLAGAQAAMKSTADRQTQTKALAQTMLDSIEGINNDEVAT 507 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ L ++ SY +T++L ++S++ +L Sbjct: 508 KILALQTSLQASYQLTSQLYQMSLVKFL 535 >gi|124516724|gb|EAY58232.1| Flagellar hook-associated protein FlgL [Leptospirillum rubarum] Length = 312 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 103/345 (29%), Gaps = 60/345 (17%) Query: 6 ISTSSIFERMNILTKELNK--DSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 I + + ++ + + ++ +G+ + R+ L + + Sbjct: 2 IRVTGLMTNREVIASHDQAIDNLYDVDRQISSGKQFETPGDAPGRMGESLRINRNLSVTR 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + + RL ++ L + ++ G + + + A L + E Sbjct: 62 RIIENAREGANRLKLMESILDQVGTLLIRAKGLAIRMANDTMTAEDRRVGAQELERTLEQ 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF------DQMLQGFLEENSKSL 177 V+ AN QYLFSG N + P K + ++ + + QGF ++ Sbjct: 122 VVSLANTKAGEQYLFSGTNVTRPPFLFTDPKLNPGSVAYLGNHRSETVQQGFSPRQREAG 181 Query: 178 LAGQHLEVSSMNAQQMTD-FIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSA 236 L + D F + Sbjct: 182 LMPVTEAGDRILGDSAADPFGNKPLPV--------------------------------- 208 Query: 237 NVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEK 296 +R + L++ + + + + + + E+ AVLG E+ Sbjct: 209 ------MRRFLLGL----------LSNDQPQ--ITRSIDELDRTIHSVTERAAVLGTRER 250 Query: 297 NINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 I L+ T S++ V+ A ++L+ N + +S Sbjct: 251 AIRTTVDRLEKYTISQKTLKSQNEDVDVPKAVSKLALNQNFLALS 295 >gi|311694368|gb|ADP97241.1| flagellar hook-associated protein FlgL [marine bacterium HP15] Length = 407 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 54/144 (37%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS+ IF +ELN +++ TGQ + IL+ +QE + + Sbjct: 4 ISSQQIFSGGINRLQELNTSLNNTQQQISTGQRVNKPSDDPVAAARILKLDQELSRVETY 63 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L RL + LSS ++Q + V G N + L + Sbjct: 64 QRNVDLADNRLKQEENALSSSIDVIQRIRELTVQAGNGSLSANDRRSISSELEERLGQLA 123 Query: 126 TFANMTD-EGQYLFSGINSSEKPL 148 AN D G+Y+FSG S K Sbjct: 124 NIANTRDASGEYIFSGFQGSVKAF 147 >gi|220932549|ref|YP_002509457.1| flagellar hook-associated protein 3 [Halothermothrix orenii H 168] gi|219993859|gb|ACL70462.1| flagellar hook-associated protein 3 [Halothermothrix orenii H 168] Length = 301 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 35/352 (9%), Positives = 107/352 (30%), Gaps = 54/352 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + + + K K ++++ TG+ + + + Sbjct: 3 ITNNIMVTNLKNYLQRGMKALDKYNKKLATGKEFTLPEEDPIATQRSMILHSALKANKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L +++ L + ++Q + + A + + + V Sbjct: 63 QRNVDHAQDWLLNTESALHDVNDVLQRAYQLAEHGANDTVSDEEREAIAQEIEELNQHLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN G+Y+FSG + K V Sbjct: 123 QLANTKVAGKYIFSGSATDTKAY------------------------------------V 146 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++ N S + + + ++ I +D + + Sbjct: 147 ANYN---------------SGTDTYTFTHYQGDNVSLTAEISPGVPVDYNISG-EDVFGP 190 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 + I +NL + R+ + + + ++ + I++ +++G ++ + L Sbjct: 191 NGELFNILENL-RQNLKNDNRDAIETR-IGELEAEMDNIMKHFSIIGAKTNRLDLSKNRL 248 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ ++ IS++ + L N + ++ + S+++++ Sbjct: 249 SSEELNLNQLISRNEDADMAETIMNLKMQENVFRATLASGARIIQPSLVDFI 300 >gi|253575864|ref|ZP_04853198.1| flagellar hook-associated protein 3 [Paenibacillus sp. oral taxon 786 str. D14] gi|251844658|gb|EES72672.1| flagellar hook-associated protein 3 [Paenibacillus sp. oral taxon 786 str. D14] Length = 296 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 101/339 (29%), Gaps = 59/339 (17%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 + +N +++ TGQ V + ++ + E L + T+ L T Sbjct: 16 LRNINSSLTTGQQQLATGQKISKPSDDPIGVGYQMRYDTDLARSEEFLLNAQTGTEILKT 75 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 + +++ + G DN + A +R YE VT N T G+YLF Sbjct: 76 MDSLFQQASDVLKRARTLALQGANGTLDNQQRRTIASEIRQLYEQMVTIGNSTFNGRYLF 135 Query: 139 SGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 +G + + P +T A + D ++ S+ Sbjct: 136 NGQKTDQAP----YTVGGAASATTD-------PGLFYLNVSPSVKIPVSITG-------- 176 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLS 258 E + +AN + + +A Sbjct: 177 -------------------------------EVVFGNANTPDNVFQVLNDLATALEGDDV 205 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 + D ++ + + + A +G + +Q+ + S Sbjct: 206 DGIQD---------SVNRIDASVDRLNVSWAEVGARMNRFDLMINRIQDDQVSLREQRSN 256 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V+ A L N ++ + ++ ++S++++L Sbjct: 257 VADVDFAEAITDLKMKENVLQAALSTGARIMQISLVDFL 295 >gi|227876729|ref|ZP_03994838.1| hypothetical protein HMPREF0577_2139 [Mobiluncus mulieris ATCC 35243] gi|306817676|ref|ZP_07451418.1| possible flagellar hook-associated protein 3 [Mobiluncus mulieris ATCC 35239] gi|227842626|gb|EEJ52826.1| hypothetical protein HMPREF0577_2139 [Mobiluncus mulieris ATCC 35243] gi|304649490|gb|EFM46773.1| possible flagellar hook-associated protein 3 [Mobiluncus mulieris ATCC 35239] Length = 328 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 121/337 (35%), Gaps = 27/337 (8%) Query: 24 KDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 + +E+M +G+ + A S + +E + + + T+ + + Sbjct: 15 QRLADANEKMASGKRMKFASDDPASSVSSMRLRKELAATEQYKRNIDDAQSWMQTADSAM 74 Query: 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINS 143 ++ K+ L+ + G A LR + ++ +T AN T G+ +F+G Sbjct: 75 DTVSKLYLHSKTKLINSVSGAMGKESLHALAADLRQNAQAIMTQANKTYLGRTVFAG--- 131 Query: 144 SEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDK 203 +S F +++ L E ++ A + I Sbjct: 132 -----------NSDKGVVFKT------GKDANGDLQFMQTEADNVTAMPVDRRINAYTTL 174 Query: 204 FSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV---NMRGIRDIMFVAVIGTEFLSKN 260 ++ + + + + I D G+ S V N + +++ A E Sbjct: 175 PANVDG-NKLFGTGTIKYVPGPIDDETGLPTSFEVDDGNNPSVMNLLVEAARLMETGDLG 233 Query: 261 LTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 G + + ++ LS ++ + ++ LG K + E + + + + T IS Sbjct: 234 GEKGEKILAIQRELSRREKL---LHTNQSDLGARHKQVLEAQDNVVSDIQAVKTQISGVE 290 Query: 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V+ A ++S + + T+++ + S+L+YL Sbjct: 291 DVDIQAATIEMSLAHMAYQAALGSTSRVVQPSLLDYL 327 >gi|157155540|ref|YP_001462317.1| flagellar hook-associated protein FlgL [Escherichia coli E24377A] gi|300922609|ref|ZP_07138709.1| flagellar hook-associated protein 3 [Escherichia coli MS 182-1] gi|301328547|ref|ZP_07221608.1| flagellar hook-associated protein 3 [Escherichia coli MS 78-1] gi|157077570|gb|ABV17278.1| flagellar hook-associated protein 3 [Escherichia coli E24377A] gi|300421086|gb|EFK04397.1| flagellar hook-associated protein 3 [Escherichia coli MS 182-1] gi|300844939|gb|EFK72699.1| flagellar hook-associated protein 3 [Escherichia coli MS 78-1] Length = 317 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 112/352 (31%), Gaps = 48/352 (13%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN TD G+Y+F+G + P + K +S Q + V Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIRQQVDA------------SRSMV 171 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++ D I D +AS+ N+ Sbjct: 172 IGHTGDKIFDSITSNAVAEPDG--------SASETNL----------------------- 200 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQG----LSGIIEQRAVLGISEKNINEE 301 + + A + L +G L+ ++ RA LG + Sbjct: 201 FAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSLNNVLTVRAGLGTQLNELESL 260 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 261 DSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|315452962|ref|YP_004073232.1| flagellar hook-associated protein 3 [Helicobacter felis ATCC 49179] gi|315132014|emb|CBY82642.1| flagellar hook-associated protein 3 [Helicobacter felis ATCC 49179] Length = 843 Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 48/145 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS S + +MN L + ++ +G G Q L++ E+N + + Sbjct: 3 ISDSGRYNQMNYYQNTLQNKLNTANTKIASGLKIQNGYQDSNINDQNLKYGFEENTLDQN 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS + ++ L+ N A L + Sbjct: 63 IDVAKSAHTSTLNTDKALSELSSTMEQFKTKLIQAASDVHSNTSRQAIALDLEKLKAHMI 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNG 150 AN + +YLF+G KP + Sbjct: 123 NVANTSIGDEYLFAGSKVDRKPFDS 147 >gi|113969613|ref|YP_733406.1| flagellar hook-associated protein FlgL [Shewanella sp. MR-4] gi|113884297|gb|ABI38349.1| flagellar hook-associated protein 3 [Shewanella sp. MR-4] Length = 402 Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 65/408 (15%), Positives = 137/408 (33%), Gaps = 64/408 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSS-----DYGLQLGARVTSILEWEQEKN 60 +S++ +F + + + K+ +++ +G+ D LG Q Sbjct: 3 LSSAQLFNQSISSVLQKQTATSKILDQLSSGKKVNTSGDDPVAALGID-----NLNQRNA 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + T L +++ L ++ M ++ G + + A LR S Sbjct: 58 LVDQFMKNIDYATNHLQQTESQLGQADTLISSMKDLMLQGSNGSQTSEERQTIADDLRKS 117 Query: 121 YESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 + +T AN D G YLF+G + P F + D + + + L Sbjct: 118 LDQLLTIANTKDESGNYLFAGNKTDTLPFQ--FDANGKIVYQGDSGVHSAIIASGIQLNT 175 Query: 180 GQHLEVSSM-NAQQMTDF-------------------------IKQLEDKFSDDEYWANN 213 + + + + M D+ + + F DD N Sbjct: 176 NVAGDTAFIKSPNAMGDYSVNYLPSQQGEFSVTSAKLDGVTPSLSDYKINFLDDGAGGIN 235 Query: 214 WSNASDHNIKYRIKDTEGIDVSANVNMRGIR------------------------DIMFV 249 I D SA++N G++ D Sbjct: 236 VEVTDTATPANVISAAAPFDPSASINFDGVKLSIEGEPKIGDSFTLHQEAEVSIFDTFSK 295 Query: 250 AVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKN 309 A+ E + T ++ L ++L+ VQ G+ I +Q+ + G S K + + ++ Sbjct: 296 AIDLFENGEQVQTPSGQSELA-QLLNNVQSGVKQISQQQGLAGNSLKVLEKYTDKHTDEK 354 Query: 310 NIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I + +SK V+ TA + + + +K+ +S+ +Y+ Sbjct: 355 LINTSALSKLEDVDYATAITEFEKQQLALNAVSSVFSKVGSVSLFDYI 402 >gi|299068739|emb|CBJ39978.1| flagellar hook-filament junction protein protein 3 [Ralstonia solanacearum CMR15] Length = 316 Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 121/353 (34%), Gaps = 42/353 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ F + + VKL +++ +G + A + +L+ +Q ++ + Sbjct: 3 VSTAQFFSASTSSMQTTQSNLVKLQQQISSGIALTAAGDNPAAMGQVLQLQQSQDTSDQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + RL+T + LS + +Q + +++ ++ Y+ + Sbjct: 63 QVNRDATYARLNTVSSALSDVISTLQQGKQSTIAANTTLLTDSQRVGILAQVKQQYQQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN D G LF+G N + P S +Q ++ Q + Sbjct: 123 SSANQRDASGVALFAGANGTTAPF-----------VSSGGSVQYVGSGQPPTVQVAQDIS 171 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 +S+ + S ++ R+ +++ +AN N + Sbjct: 172 MSN----------------------------SVSGDSVFVRVPNSDA--SNANANQSVFK 201 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + ++ ++ + A + + ++ + +G + I Sbjct: 202 TYENLITALSKPITTSADVTAIQTAVQTAQGNLDSAYQVALQAQVTVGTQQAQITTLNSS 261 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 N + ISK V+ +A +Q S ++ + + +Q LS+ Y+ Sbjct: 262 GSNFGEQLKEQISKLQSVDYTSAISQFSQQQVSLQAAQKTFSAMQGLSLFQYI 314 >gi|157146219|ref|YP_001453538.1| flagellar hook-associated protein FlgL [Citrobacter koseri ATCC BAA-895] gi|157083424|gb|ABV13102.1| hypothetical protein CKO_01976 [Citrobacter koseri ATCC BAA-895] Length = 317 Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 108/357 (30%), Gaps = 56/357 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 3 ISTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVINPSDDPIAASQAIVLAQAQAQNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S + LS + +Q +V G ++ A L+ + + Sbjct: 63 ALARTFATQKVSLEENVLSQVTAAIQTAQEKIVYAANGTLSDDDRASLASDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 AN TD G+Y+F+G + + P + Y + D + Sbjct: 123 NLANSTDGNGRYIFAGYKTEKAPFDQANGDYSGGTENITQQVDASRTMVIGH-------- 174 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 Q I RI + + + Sbjct: 175 --------TGDQ-----------------------------IFNRITSNAVPEPDNSASE 197 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGL----SGIIEQRAVLGISEK 296 + + + D + + +GL + ++ RA LG Sbjct: 198 TSL--FAMLDTAIAALKTPVADDDVKKAEAAAAIDKTNRGLKNSLNNVLTVRAELGTQLS 255 Query: 297 NINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ + +S + V+ + A + ++ SY + +Q +S+ Sbjct: 256 ELDSLDSLGSERALGQAQQMSDLVDVDWNAAISSYVMQQAALQASYKAFSDMQGMSL 312 >gi|260597452|ref|YP_003210023.1| flagellar hook-associated protein FlgL [Cronobacter turicensis z3032] gi|260216629|emb|CBA29930.1| Flagellar hook-associated protein 3 [Cronobacter turicensis z3032] Length = 320 Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 109/349 (31%), Gaps = 37/349 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++++ + +K E+M TG+ + + Q + + Sbjct: 3 ISTQMMYQQNMRGITDSQSTWLKYGEQMSTGKRVNRPSDDPIAAAQAVVLSQAQAQNEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S + LS + ++ +V G + A L+ + + Sbjct: 63 TQARTFATQKVSLESSVLSQVTSVITSAQEKIVYANNGTLSDTDRASVATDLQGMRDQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F+G + P + + +++ EN + Sbjct: 123 NLANSTDGNGRYIFAGYKTDAAPFS-----GTPGNVTYNGG-----TENITQQVDSARTM 172 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V + D I D + +D + + Sbjct: 173 VIGHTGNLVFDSITSNAKPEPDGSP--------------SETNLFKMLDSAIAALKTPM- 217 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 E + G + +TK + L + A +G K + Sbjct: 218 ----------EGADETTQQGLLDAITKTSRG-LSNSLDNVGTVLAEVGTQHKELENLDQL 266 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + +S + V+ ++A + ++ SY + +Q +S+ Sbjct: 267 GAERTLGQTAQMSNLVDVDWNSAISSYVMQQAALQASYKAFSDMQGMSL 315 >gi|320179216|gb|EFW54174.1| Flagellar hook-associated protein FlgL [Shigella boydii ATCC 9905] Length = 317 Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 106/352 (30%), Gaps = 48/352 (13%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLPTDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I D N D I Sbjct: 175 -------TGDKIFDSITSNAVAEPDGSASETNLFAMLDSAI------------------- 208 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 A + T K ++ L+ ++ RA LG + Sbjct: 209 --------AALKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESL 260 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 261 DSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|239996707|ref|ZP_04717231.1| flagellar hook-associated protein FlgL [Alteromonas macleodii ATCC 27126] Length = 407 Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 52/408 (12%), Positives = 114/408 (27%), Gaps = 59/408 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ I+++ + D K E++ +G+ +L +E + + + Sbjct: 3 ISTNQIYDQNMRSIMQNQGDLAKTQEQLASGKRIITPSDDPVGAAKVLRLTEEIDELTQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 +N LVT L +A L+++ V ++ G D+ L Sbjct: 63 QRNNDLVTGSLEQQEAVLTNITNSVNRARTLVIQAGSGALDSPDRKAIGAELEQIKLEIF 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH-- 182 N D G YL++G S + T A F++ ++ S + Sbjct: 123 DLMNTQDAEGSYLYAGFQSGNQAFEYNPTATDKAITFTGDAGVSFVQLSNSSKIQSTSNG 182 Query: 183 -----------------------LEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASD 219 E S F + D + AS Sbjct: 183 YEVFENVLSRYKFSTDPASTAVVSEASVKQQGTFDTFFDKNYDPVNTGNNDYRINFLASG 242 Query: 220 HNIKYRIKDTEGIDVSANVNMRGI--------------------------RDIMFVA-VI 252 ++ A + + + + I Sbjct: 243 QAELVNQGTGVIVESVAYTSGQPFTIKGMEFEATAVPGDSIDLSLDAPEKKSMAQTLHEI 302 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI---SEKNINEERVFLQNKN 309 ++ L + GL + + A +G ++I E + ++ Sbjct: 303 QAVLNDSSIDSFELQESISDALVGLDNGLEKLSLEHASIGSRLNIAESIYESNLDMEIAA 362 Query: 310 NIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + I + + A + + + + ++ +LS+ N++ Sbjct: 363 KASRSSIQDT---DYAEASTEFAKQETALSAALATFPQVTELSLFNFI 407 >gi|114777913|ref|ZP_01452827.1| flagellar hook-associated protein [Mariprofundus ferrooxydans PV-1] gi|114551700|gb|EAU54252.1| flagellar hook-associated protein [Mariprofundus ferrooxydans PV-1] Length = 293 Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 113/352 (32%), Gaps = 62/352 (17%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+++ ++ + K+ + + ++ +G Q G + L+ + + Sbjct: 3 ITSAQMYNTLLTGVKQQQDILNQGNAQIASGTKFQTPDQAGIAYKTSLDIRHAQVGLQGD 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 L S + RL+ S L+ M I++ V + T + A Sbjct: 63 LDSITTADSRLANSMTMLNDMTNIMKRAQTVAVQMATASTSATERLSAAQEATQLLNQAF 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN +GQ LF+G + + F+ + +++ + + Sbjct: 123 NDANQQWQGQSLFAGTATDKA---------------------AFVTDTLGNIVYNGNAQD 161 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++ I + D+ +A +S D + DT G+ + Sbjct: 162 RTIVTSDGQQVITNIRG---DNPAFAAAFSALQDFKTALQNNDTAGVQNAVGA------- 211 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 + G+I + +G + + + Sbjct: 212 -------------------------------LTSASDGVINMTSDVGARLNGVRLNKTAI 240 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 Q++ + T ++ + V+ + A++ ++ +Y +++ L++ N+L Sbjct: 241 QDRQLNLATQLNTNEAVDIPSVVARMQQSSIALQAAYSQINQIKSLTLTNFL 292 >gi|320186969|gb|EFW61682.1| Flagellar hook-associated protein FlgL [Shigella flexneri CDC 796-83] Length = 317 Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 110/356 (30%), Gaps = 56/356 (15%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + +++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFAIQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNG----YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I D +AS+ N+ Sbjct: 175 -------TGDKIFDSITSNAVAEPDG--------SASETNL------------------- 200 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQG----LSGIIEQRAVLGISEKN 297 + + A + L +G L+ ++ RA LG Sbjct: 201 ----FAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSLNNVLAVRAELGTQLNE 256 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 257 LESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|313200556|ref|YP_004039214.1| flagellar hook-associated protein 3 [Methylovorus sp. MP688] gi|312439872|gb|ADQ83978.1| flagellar hook-associated protein 3 [Methylovorus sp. MP688] Length = 301 Score = 60.1 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 110/353 (31%), Gaps = 55/353 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST++I++ L + KL +++ +G+ L Q ++ ++ Sbjct: 3 ISTNTIYQTGINKISALQSEQYKLQQQVSSGKRILTPADDPVGAARALTISQAQSINSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++ + L++ ++ L+S+ ++ LV + + A L + + + Sbjct: 63 ADNRAMASFNLNSIESTLTSVTDLMVSAKSTLVGAGNAVLSSEEKNYIATQLSNDLQELI 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN D G YLF G K + ++ Sbjct: 123 GLANSKDGNGNYLFGGF-----------------KNTTQPYTATTTGATYNGDNGQMDMQ 165 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 VS S + ++ + + Sbjct: 166 VSD-----------------------TRRMSTTENGPDVFQAEGNDV------------- 189 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 ++ I + T A N +++ +GL ++ RA G K I+ Sbjct: 190 -FATLSNIVDLLSNPATTSAALNTALASANTSLDKGLDNVLTVRASTGSKLKEIDALDNN 248 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++N +S ++ A + ++ +E + +L L++ Y+ Sbjct: 249 GDDRNLQYKAELSDIQDLDYAQALSDITKQKTILEAAQQSYVQLSGLTLFKYI 301 >gi|298345980|ref|YP_003718667.1| flagellar hook-associated protein 3 [Mobiluncus curtisii ATCC 43063] gi|304390262|ref|ZP_07372216.1| flagellar hook-associated protein 3 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298236041|gb|ADI67173.1| flagellar hook-associated protein 3 [Mobiluncus curtisii ATCC 43063] gi|304326744|gb|EFL93988.1| flagellar hook-associated protein 3 [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 327 Score = 60.1 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 125/356 (35%), Gaps = 30/356 (8%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ++TS + + ++++ +G+ + A S + +E Sbjct: 1 MITRMTTSMMAGTTLSTIQRNFNRLADANKKLSSGKRMSFASDDPASSVSSMRLRKELAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + S L+TS A + S+ + + L+ ++G + A LR Sbjct: 61 TEQYKRNISDANSWLATSDAAMQSVAERYTEARTLLINSIDGALGSQSQGALAAQLRKVA 120 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 ES ++ AN T G+ +F+G NS + + + + + LA + Sbjct: 121 ESIMSQANATYLGRTVFAG-NSDKG-----------------LVFKTGSDGHDTIFLAAE 162 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 E+++ + D ++ ++ + D + + + N Sbjct: 163 KDEITAKTVDRRIDADTTVQANLDGNKLFGTGTIKWDD---------NDKTKLDTDNNPS 213 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 + ++ A I S G + + + + + + E ++ +G K + E Sbjct: 214 VMNLLVEAAKI---LESPTGPSGDNRSKIESIQKELTERFAKLQEAQSAVGARHKQVLEA 270 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + IS ++ +A +S + S T ++ + ++L+YL Sbjct: 271 QENVIFDLEQVKGQISSVEDIDILSATIDMSLASMAYQSSLGSTQRVVQPTLLDYL 326 >gi|15616182|ref|NP_244487.1| flagellar hook-associated protein 3 (HAP3) [Bacillus halodurans C-125] gi|10176244|dbj|BAB07339.1| flagellar hook-associated protein 3 (HAP3) [Bacillus halodurans C-125] Length = 395 Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 40/389 (10%), Positives = 111/389 (28%), Gaps = 49/389 (12%) Query: 13 ERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLV 72 + + +L +++ TG+ Q + + + + + + V Sbjct: 11 NSLR-HISQGYMRLGELQDQLSTGKRITRASQDPVVAMKGIRYRTQVAEVEQFKRNLREV 69 Query: 73 TKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD 132 + T+ A L + + + + A +R YE + AN + Sbjct: 70 YNWMDTADAALGEATDALARIHELATQAANDTYEETQRANIAKEIRQLYEHLQSIANTKN 129 Query: 133 EGQYLFSGINSSEKPLNG-------------------------------YFTKDSLAKKS 161 G+Y+F+G N++ P+ Y +++ Sbjct: 130 SGKYIFNGTNTTNPPIVAPERMDLGFAHLLEPGTDLQTVEIVYDGQTYHYVGENADGHLV 189 Query: 162 FDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNW------- 214 F + Q ++ + + + I + + N Sbjct: 190 FQDVRQMNSLPFDETDSDEFNEKAFQLVIDPDLGRITSSQPNVNTGAAETKNVRLNDVVV 249 Query: 215 ---SNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIG---TEFLSKNLTDGARNV 268 S + + I+ +G+ + N N + + I +++ Sbjct: 250 ADREAVSFNTQRVEIELLKGVKIPVNTNPTNVFNNALFGDILRLEKALEDPSVSGAELTA 309 Query: 269 LTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAH 328 + Q + +RA LG + + + +S + V+ Sbjct: 310 YIDNFTKHIDQ----VTAERAELGARVNRVEMLESRILQQEITAKRIMSDNEDVDLEKVI 365 Query: 329 AQLSTLINKIEMSYMITTKLQKLSILNYL 357 L+ + + + ++ + +++++L Sbjct: 366 IDLTIQESVHRAALAVGARIMQPTLMDFL 394 >gi|224418230|ref|ZP_03656236.1| flagellar hook-associated protein FlgL [Helicobacter canadensis MIT 98-5491] gi|253827555|ref|ZP_04870440.1| flagellar hook-associated protein [Helicobacter canadensis MIT 98-5491] gi|313141763|ref|ZP_07803956.1| flagellar hook-protein FlgL [Helicobacter canadensis MIT 98-5491] gi|253510961|gb|EES89620.1| flagellar hook-associated protein [Helicobacter canadensis MIT 98-5491] gi|313130794|gb|EFR48411.1| flagellar hook-protein FlgL [Helicobacter canadensis MIT 98-5491] Length = 874 Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 51/155 (32%), Gaps = 6/155 (3%) Query: 61 HIAERLHSNSLVTKRLS---TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 ++ S L L+ + LS + K + + LV A L Sbjct: 54 NLTTLTQSKELANNALTFTRHTDTALSELVKNMDNFKSKLVQGANDIHSETSRLAIAQDL 113 Query: 118 RDSYESFVTFANMTDEGQYLFSGINSSEKPLN---GYFTKDSLAKKSFDQMLQGFLEENS 174 + + F++ AN + G+++F+G ++ KP N Y ++ Sbjct: 114 QSLRDHFLSIANTSIGGEFIFAGTATTSKPFNSDGSYNGNNATLNALLSSSNSVTYNITG 173 Query: 175 KSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEY 209 L G + + + + + F + + D Sbjct: 174 YELFFGSDNDTNRIISTNVPKFNQSALNPQIMDPN 208 >gi|157160610|ref|YP_001457928.1| flagellar hook-associated protein FlgL [Escherichia coli HS] gi|193064538|ref|ZP_03045618.1| flagellar hook-associated protein 3 [Escherichia coli E22] gi|194428487|ref|ZP_03061027.1| flagellar hook-associated protein 3 [Escherichia coli B171] gi|209918337|ref|YP_002292421.1| flagellar hook-associated protein FlgL [Escherichia coli SE11] gi|260843323|ref|YP_003221101.1| flagellar hook-filament junction protein FlgL [Escherichia coli O103:H2 str. 12009] gi|300821136|ref|ZP_07101285.1| flagellar hook-associated protein 3 [Escherichia coli MS 119-7] gi|300918687|ref|ZP_07135267.1| flagellar hook-associated protein 3 [Escherichia coli MS 115-1] gi|312971220|ref|ZP_07785398.1| flagellar hook-associated protein 3 [Escherichia coli 1827-70] gi|331667484|ref|ZP_08368348.1| flagellar hook-associated protein 3 [Escherichia coli TA271] gi|331676874|ref|ZP_08377570.1| flagellar hook-associated protein 3 [Escherichia coli H591] gi|157066290|gb|ABV05545.1| flagellar hook-associated protein 3 [Escherichia coli HS] gi|192927790|gb|EDV82404.1| flagellar hook-associated protein 3 [Escherichia coli E22] gi|194413539|gb|EDX29821.1| flagellar hook-associated protein 3 [Escherichia coli B171] gi|209911596|dbj|BAG76670.1| flagellar hook-filament junction protein 3 FlgL [Escherichia coli SE11] gi|257758470|dbj|BAI29967.1| flagellar hook-filament junction protein FlgL [Escherichia coli O103:H2 str. 12009] gi|300414161|gb|EFJ97471.1| flagellar hook-associated protein 3 [Escherichia coli MS 115-1] gi|300526435|gb|EFK47504.1| flagellar hook-associated protein 3 [Escherichia coli MS 119-7] gi|310336422|gb|EFQ01608.1| flagellar hook-associated protein 3 [Escherichia coli 1827-70] gi|323163693|gb|EFZ49514.1| flagellar hook-associated protein 3 [Escherichia coli E128010] gi|324017413|gb|EGB86632.1| flagellar hook-associated protein 3 [Escherichia coli MS 117-3] gi|331065069|gb|EGI36964.1| flagellar hook-associated protein 3 [Escherichia coli TA271] gi|331075563|gb|EGI46861.1| flagellar hook-associated protein 3 [Escherichia coli H591] Length = 317 Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 112/352 (31%), Gaps = 48/352 (13%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNG----YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I S+ + +E N+ Sbjct: 175 -------TGDKIFDSIT-------------------SNAVAEPDGSASET-------NLF 201 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 + D A + T K ++ L+ ++ RA LG + Sbjct: 202 AMLDSAIAA-LKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESL 260 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 261 DSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|253998481|ref|YP_003050544.1| flagellar hook-associated protein FlgL [Methylovorus sp. SIP3-4] gi|253985160|gb|ACT50017.1| flagellar hook-associated protein 3 [Methylovorus sp. SIP3-4] Length = 301 Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 110/353 (31%), Gaps = 55/353 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST++I++ L + KL +++ +G+ L Q ++ ++ Sbjct: 3 ISTNTIYQTGINKISALQSEQYKLQQQVSSGKRILTPADDPVGAARALTISQAQSINSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++ + L++ ++ L+S+ ++ LV + + A L + + + Sbjct: 63 ADNRAMASFNLNSIESTLTSVTDLMVSAKSTLVGAGNAVLSSEEKNYIATQLSNDLQELI 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN D G YLF G K + ++ Sbjct: 123 GLANSKDGNGNYLFGGF-----------------KNTTQPYTATTTGATYNGDNGQMDMQ 165 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 VS S + ++ + + Sbjct: 166 VSD-----------------------TRRMSTTENGPDVFQAEGNDV------------- 189 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 ++ I + T A N +++ +G+ ++ RA G K I+ Sbjct: 190 -FATLSNIVDLLSNPATTSAALNTALASANTSLDKGMDNVLTVRASTGSKLKEIDALDNN 248 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++N +S ++ A + ++ +E + +L L++ Y+ Sbjct: 249 GDDRNLQYKAELSDIQDLDYAQALSDITKQKTILEAAQQSYVQLSGLTLFKYI 301 >gi|209884511|ref|YP_002288368.1| hypothetical protein OCAR_5371 [Oligotropha carboxidovorans OM5] gi|209872707|gb|ACI92503.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5] Length = 511 Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 68/205 (33%), Gaps = 6/205 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M G+S + + L +++ +G+ SD LG + + Sbjct: 1 MTIEGVS--GRTSYLGTSLINIRTQLDTLTQQLASGRKSDTYSGLGMNSAFATNLRSQLS 58 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ ++ S VT R++ + L + K+ ++ + N + + S Sbjct: 59 LLSGYQNTQSNVTTRINVANLSLQGLIKMRTEVQSAATGSSQVLNANGQ-TAGQQIGYAS 117 Query: 121 YESFVTFANMTDEGQYLFSG--INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLL 178 + ++ N +YLFSG I++ + K ++ L + + Sbjct: 118 FTQAISMLNTQSADRYLFSGRSIDTPATAKADDILNGADGKDGLKAVIDDRLIADQGTGN 177 Query: 179 AGQ-HLEVSSMNAQQMTDFIKQLED 202 G+ + + DF+ Sbjct: 178 MGRLETDATGSVVTVGEDFVDSPFG 202 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 54/149 (36%), Gaps = 11/149 (7%) Query: 220 HNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF---------LSKNLTDGARNVLT 270 ++ + A N R+++ + +NL + + L Sbjct: 363 GTAVAQVDGAVQVRYGATANESAFRNLLQNMAVYAAVTTTVDPNDPAGQNLANAQISALN 422 Query: 271 KKMLSTVQ--QGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAH 328 +++ + + G + + + A S+ ++ T + + G++ + Sbjct: 423 ERVNANLAVKAGATSVEDIEAQFAGSQAATKAASTRQAQTTSMAQTMLDQIEGIDDNEVA 482 Query: 329 AQLSTLINKIEMSYMITTKLQKLSILNYL 357 A++ L ++ SY T L +L++L +L Sbjct: 483 AKILALQTSLQASYQTTASLYQLNLLKFL 511 >gi|16129046|ref|NP_415601.1| flagellar hook-filament junction protein [Escherichia coli str. K-12 substr. MG1655] gi|89107929|ref|AP_001709.1| flagellar hook-filament junction protein [Escherichia coli str. K-12 substr. W3110] gi|170080734|ref|YP_001730054.1| flagellar hook-filament junction protein [Escherichia coli str. K-12 substr. DH10B] gi|238900337|ref|YP_002926133.1| flagellar hook-filament junction protein [Escherichia coli BW2952] gi|256023219|ref|ZP_05437084.1| flagellar hook-associated protein FlgL [Escherichia sp. 4_1_40B] gi|300950180|ref|ZP_07164124.1| flagellar hook-associated protein 3 [Escherichia coli MS 116-1] gi|300954377|ref|ZP_07166831.1| flagellar hook-associated protein 3 [Escherichia coli MS 175-1] gi|301029702|ref|ZP_07192756.1| flagellar hook-associated protein 3 [Escherichia coli MS 196-1] gi|301644497|ref|ZP_07244492.1| flagellar hook-associated protein 3 [Escherichia coli MS 146-1] gi|307137718|ref|ZP_07497074.1| flagellar hook-associated protein FlgL [Escherichia coli H736] gi|331641627|ref|ZP_08342762.1| flagellar hook-associated protein 3 [Escherichia coli H736] gi|416996|sp|P29744|FLGL_ECOLI RecName: Full=Flagellar hook-associated protein 3; Short=HAP3; AltName: Full=Hook-filament junction protein gi|407679|gb|AAA18322.1| hook-associated protein 3 [Escherichia coli] gi|1651529|dbj|BAA35892.1| flagellar hook-filament junction protein [Escherichia coli str. K12 substr. W3110] gi|1787324|gb|AAC74167.1| flagellar hook-filament junction protein [Escherichia coli str. K-12 substr. MG1655] gi|169888569|gb|ACB02276.1| flagellar hook-filament junction protein [Escherichia coli str. K-12 substr. DH10B] gi|238861109|gb|ACR63107.1| flagellar hook-filament junction protein [Escherichia coli BW2952] gi|260449777|gb|ACX40199.1| flagellar hook-associated protein 3 [Escherichia coli DH1] gi|299877390|gb|EFI85601.1| flagellar hook-associated protein 3 [Escherichia coli MS 196-1] gi|300318613|gb|EFJ68397.1| flagellar hook-associated protein 3 [Escherichia coli MS 175-1] gi|300450465|gb|EFK14085.1| flagellar hook-associated protein 3 [Escherichia coli MS 116-1] gi|301077161|gb|EFK91967.1| flagellar hook-associated protein 3 [Escherichia coli MS 146-1] gi|309701355|emb|CBJ00656.1| flagellar hook-associated protein 3 [Escherichia coli ETEC H10407] gi|315135715|dbj|BAJ42874.1| flagellar hook-associated protein FlgL [Escherichia coli DH1] gi|315618253|gb|EFU98843.1| flagellar hook-associated protein 3 [Escherichia coli 3431] gi|323937823|gb|EGB34087.1| flagellar hook-associated protein 3 [Escherichia coli E1520] gi|323942552|gb|EGB38719.1| flagellar hook protein 3 [Escherichia coli E482] gi|331038425|gb|EGI10645.1| flagellar hook-associated protein 3 [Escherichia coli H736] Length = 317 Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 112/352 (31%), Gaps = 48/352 (13%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNG----YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I S+ + +E N+ Sbjct: 175 -------TGDKIFDSIT-------------------SNAVAEPDGSASET-------NLF 201 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 + D A + T K ++ L+ ++ RA LG + Sbjct: 202 AMLDSAIAA-LKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESL 260 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 261 DSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|42522142|ref|NP_967522.1| FgL, flagellar protein [Bdellovibrio bacteriovorus HD100] gi|39574673|emb|CAE78515.1| FgL, flagellar protein [Bdellovibrio bacteriovorus HD100] Length = 361 Score = 59.7 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 124/369 (33%), Gaps = 42/369 (11%) Query: 13 ERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNHIAERLHS 68 ++N + D L + T + SD L +T+ E I ++ Sbjct: 10 NQVNQNLTKNRSDMADLQNQAATQKRINKPSDDPLASARVLTARTEERGNTQFIKNINNA 69 Query: 69 NSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFP-INAGMLRDSYESFVTF 127 S L S LS + +I+ V + N + + A + Y + Sbjct: 70 RSF----LEFSDQSLSELTEILVRAKELAVSQSNDASGNEESRMVTASEIEQIYNQSIQI 125 Query: 128 ANMTDEGQYLFSGINSSEKPLN---GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N +Y+F G + P N YF DS K + + + G+ L Sbjct: 126 GNRKLGERYIFGGQKTQTTPFNQSGEYFGNDSDMKIQTQKDSFVAMNLPGSKVFLGRGLG 185 Query: 185 VSSMNAQQ---------MTDFIKQLEDKFSD----DEYWANNWSNASDHNIKYRIKDTEG 231 + Q + DF Q ++ D + AS+ + R + Sbjct: 186 GDGIVRAQYETPTDVQSLKDFQNQEVERQQVNEEVDSNFLTTRGPASESGRQSRADRQDP 245 Query: 232 IDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARN-VLTKKMLSTVQQGLSGIIEQRAV 290 + S VN + + + ++ + ++ L T+ Q +S ++ R+ Sbjct: 246 VTGSVGVN------------LFSTLKNLEISLKTNDKAGVQESLDTLDQAISQVVLARSE 293 Query: 291 LGISEKNINEERVFLQNKNNIIDTYISK--SIGVEQHTAHAQLSTLINKIEMSYMITTKL 348 +G +N L + ++D ++ + + ++ + ++ + + KL Sbjct: 294 VGSRIMAVNNTNDSL--QKAVVDNKVTASQLEDADAFQVISDINKTDSTLKATLETSGKL 351 Query: 349 QKLSILNYL 357 + S+L++L Sbjct: 352 IQPSLLDFL 360 >gi|315654566|ref|ZP_07907472.1| flagellar hook-associated protein 3 [Mobiluncus curtisii ATCC 51333] gi|315491030|gb|EFU80649.1| flagellar hook-associated protein 3 [Mobiluncus curtisii ATCC 51333] Length = 327 Score = 59.7 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 126/356 (35%), Gaps = 30/356 (8%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ++TS + + ++++ +G+ + A S + +E Sbjct: 1 MITRMTTSMMAGTTLSTIQRNFNRLADANKKLSSGKRMSFASDDPASSVSSMRLRKELAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + S L+TS A + S+ + + L+ ++G + A LR Sbjct: 61 TEQYKRNISDANSWLATSDAAMQSVAERYTEARTLLINSIDGALGSQSQGALAAQLRKVA 120 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 ES ++ AN T G+ +F+G NS + + + + + LA + Sbjct: 121 ESIMSQANATYLGRTVFAG-NSDKG-----------------LVFKTGSDGHDTIFLAAE 162 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 E+++ + D ++ ++ + D + + + N Sbjct: 163 KDEITAKTVDRRIDADTTVQANLDGNKLFGTGTVKWDD---------NDETKLDTDNNPS 213 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 + ++ A I S G + + + + + + + E ++ +G K + E Sbjct: 214 VMNLLVEAAKI---LESPTGPTGDNRLKIESIQKELTERFAKLQEAQSAVGARHKQVLEA 270 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + IS ++ +A +S + S T ++ + ++L+YL Sbjct: 271 QENVIFDLEQVKGQISSVEDIDILSATIDMSLANMAYQSSLGSTQRVVQPTLLDYL 326 >gi|302344091|ref|YP_003808620.1| Flagellin and related hook-associated protein [Desulfarculus baarsii DSM 2075] gi|301640704|gb|ADK86026.1| Flagellin and related hook-associated protein [Desulfarculus baarsii DSM 2075] Length = 817 Score = 59.7 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 91/310 (29%), Gaps = 36/310 (11%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+T+ + + L KL ++++TGQ + G +I+ + + Sbjct: 1 MRTSNANQYRLISS---DLSNLLAAQYKLQKQVLTGQVGTTPSEQGGASNAIMRTNLQMD 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 I++ + L++S+ + +M I+ + G + + A + + Sbjct: 58 LISQYRVNLESADSWLTSSETAMQNMVNILTQAKTVAEKMSTGTQQSLEQQTAAEEVSNI 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + VT +N G Y+F G +++ +P+ + + + + Sbjct: 118 FAQLVTLSNTKVNGLYIFGGTSTNSRPVITALAAAGPSSLTRTVAAGHDSTADVVANPLT 177 Query: 181 QHLEVSSMNAQQMTD------------FIKQLEDKFSDDEYWANNWSNA----------- 217 + + + S D A NW Sbjct: 178 SGAYAFQIGRNSVGTSSTITISANNTLGETGIVPPLSFDAG-AANWITTQTAQDYQAQLL 236 Query: 218 --------SDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVL 269 S + RI +T + + V+ G + ++ DGA Sbjct: 237 TLRYAFASSSSEVSARIGETFSWTGDSAAGEQTFHSYAKVSFSGAGTATIDI-DGAPTYT 295 Query: 270 TKKMLSTVQQ 279 V+ Sbjct: 296 ADSAQELVEA 305 Score = 53.6 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 45/113 (39%), Gaps = 1/113 (0%) Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 +M + V+ E L+ ++++ L + + I++ A G + I Sbjct: 705 QLMDMFVMWEEALASG-DQEYAQTVSQQALDVLTAAMEQILDYVADSGARQDRIAVRGAV 763 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ + GV+ A LS L S +T+ + ++ ++NY+ Sbjct: 764 MDDQELYHIGVLEDLDGVDTTQAFIDLSMLQTAYNTSLKVTSTISEMYLVNYI 816 >gi|293409449|ref|ZP_06653025.1| flagellar hook-associated protein 3 [Escherichia coli B354] gi|301023270|ref|ZP_07187067.1| flagellar hook-associated protein 3 [Escherichia coli MS 69-1] gi|291469917|gb|EFF12401.1| flagellar hook-associated protein 3 [Escherichia coli B354] gi|300397115|gb|EFJ80653.1| flagellar hook-associated protein 3 [Escherichia coli MS 69-1] Length = 317 Score = 59.7 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 53/348 (15%), Positives = 118/348 (33%), Gaps = 40/348 (11%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN TD G+Y+F+G + P F E + + + + ++ Sbjct: 124 LANTTDGNGRYIFAGYKTETAP---------------------FSEADGEYVGGAESIKQ 162 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++ M I DK D S S+ + +E N+ + D Sbjct: 163 QVDASRSMV--IGHTGDKIFD--------SITSNAVAEPDGSASET-------NLFAMLD 205 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 A + T K ++ L+ ++ RA LG + Sbjct: 206 SAIAA-LKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTIRAELGTQLNELESLDSLG 264 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 265 SDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|117919779|ref|YP_868971.1| flagellar hook-associated protein FlgL [Shewanella sp. ANA-3] gi|117612111|gb|ABK47565.1| flagellar hook-associated protein 3 [Shewanella sp. ANA-3] Length = 403 Score = 59.7 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 60/408 (14%), Positives = 144/408 (35%), Gaps = 63/408 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSS-----DYGLQLGARVTSILEWEQEKN 60 +S++ IF + + + K+ E++ +G+ D LG Q Sbjct: 3 LSSAQIFNQSITSVLQKQTATSKILEQLSSGKKVNTAGDDPVAALGID-----NLNQRNA 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + T RL+ +++ L S + + + ++ + G +++ + A ++ S Sbjct: 58 LVDQFMKNIDYATNRLAVTESKLGSAENLASSIREQVMRAVNGTLADSERQMIADEMKGS 117 Query: 121 YESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ-----------MLQG 168 E ++ AN D G Y+FSG ++ ++P + S D L Sbjct: 118 LEELLSIANSKDESGNYMFSGYSTDKEPFAFDNSTPPKIVYSGDSGIRNSLVQSGVALGT 177 Query: 169 FLEENSKSLLAGQHLEVSSMN--AQQMTDF------IKQLEDKFSDDE--YWANNWSNAS 218 + ++ + A L S+N A Q +F I +D +++N S + Sbjct: 178 NVPGDTAFMKAPNGLGDYSVNYLASQQGEFSVKTAKIADPATYLADTYTFNFSDNGSGGT 237 Query: 219 D-----------------------------HNIKYRIKDTEGIDVSANVNMRGIRDIMFV 249 + NI + + + + I Sbjct: 238 NLQVLDSANNPVANIANFDAATPVSFNGIEVNISGKPSAGDSFTMEPQSEVSIFDTISRA 297 Query: 250 AVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKN 309 + + S N G ++L+ + G++ I R+V G + K + + + Sbjct: 298 IALIEDPNSANTPQGRSQ--LAQILNDIDSGVNQISSARSVAGNNLKAVESYKDTHIEEQ 355 Query: 310 NIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +S ++ +A + + + + +K+ +S+ +Y+ Sbjct: 356 VLNTSALSLLEDLDYASAITEFAKQQLALNAVSSVFSKVGSVSLFDYI 403 >gi|92116888|ref|YP_576617.1| hypothetical protein Nham_1333 [Nitrobacter hamburgensis X14] gi|91799782|gb|ABE62157.1| hypothetical protein Nham_1333 [Nitrobacter hamburgensis X14] Length = 587 Score = 59.7 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 34/317 (10%), Positives = 77/317 (24%), Gaps = 11/317 (3%) Query: 49 VTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN 108 S +L+ + ++ + L D Sbjct: 274 AASATNLNAALTDAEATTSPYG---AQLTGVSSSVAGVTVTPAQASIDLGAATPAAGDTV 330 Query: 109 KFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQG 168 F N + + G G E N L Sbjct: 331 SFTFNLPDGSSETVQLTASSEVPTPGGCFAIGTTPDETTANLNGALTKSIGTLAKTSLVA 390 Query: 169 FLEENSKSLLAGQHLEVSSMNA-QQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY--R 225 + + + + + ++ W + R Sbjct: 391 ASAIRATHDFFDSPPQRVDVTPPATLATATGAVNGTAANTVQWYTGDAGTGSARATSSVR 450 Query: 226 IKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTK-----KMLSTVQQG 280 + + + N IR +M + + N ++ TV G Sbjct: 451 VDPSVTVQYGIRANEDAIRSLMESVAVLAAVTTSPTDPNGANQISALNARIAQNLTVTPG 510 Query: 281 LSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEM 340 I + ++ L ++ + + + + + ++ V +QL L ++ Sbjct: 511 KQNIQDIQSDLANAQTVMKDATARQKLTQATMQNIVDQAETVSTDQVASQLLALQTSLQA 570 Query: 341 SYMITTKLQKLSILNYL 357 SY T L +LS++ +L Sbjct: 571 SYQTTAMLSQLSLVKFL 587 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 53/174 (30%), Gaps = 1/174 (0%) Query: 18 LTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLS 77 + L L ++ +G+ S +GA + + ++IA + + + + Sbjct: 16 SIQSLKVQMADLQSQLTSGKKSTTYSGMGANEGFAIAARAQLSNIAAYTDTMTKINTNIQ 75 Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 + L ++ I + + + + S V N +Y+ Sbjct: 76 VANTALQALADIGSQLQTAANSGSQALNSAGQ-TAGQQTAVAEFSSMVGILNTQAGDRYI 134 Query: 138 FSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQ 191 FSG +P+ + + Q E N L G V+ + Sbjct: 135 FSGSTIYTQPVASSDLILNGNGAGQAGLKQVISERNQADLGTGGFGRVTISSPT 188 >gi|152965587|ref|YP_001361371.1| flagellar hook-associated protein 3 [Kineococcus radiotolerans SRS30216] gi|151360104|gb|ABS03107.1| flagellar hook-associated protein 3 [Kineococcus radiotolerans SRS30216] Length = 302 Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 102/353 (28%), Gaps = 60/353 (16%) Query: 5 GISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAE 64 I+T+++ N KL E++ +G S G + R + L + E Sbjct: 9 SIATNALTNLQNT-----QTRMAKLQEQITSGNSLPKGSEDSVRAAAALRLNDQIAVNTE 63 Query: 65 RLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + + T + L S K +Q + V G D A + E+ Sbjct: 64 NGRNLDEARAWMVTQEPALESTTKALQKVRELTVRASNGTFDATARKAIAAEITALKETI 123 Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN +G+ +F+G ++ D+ S D Sbjct: 124 LGDANTQYQGRAVFAGTSAGT------VAYDATTYASNDDTNTTVTPAV----------- 166 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + + V+ + N Sbjct: 167 -----------------------------------GVVTRTVSPGVHMQVNISGNSV--- 188 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + E + + LST+ ++ A +G ++ Sbjct: 189 YGSGNDSLFAELDTLAQKITDGDPTAAASLSTIDGRITKATNAMATIGARTNQLDHAEEV 248 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 N+ ++ ++ GV+ A+ + + + + +T K + S+L++L Sbjct: 249 NANQLAYLEAQLNDVQGVDPAKAYVEFTQQNVAYQAALQVTAKTVQTSLLDFL 301 >gi|82544452|ref|YP_408399.1| flagellar hook-associated protein FlgL [Shigella boydii Sb227] gi|81245863|gb|ABB66571.1| hook-filament junction protein [Shigella boydii Sb227] gi|332094135|gb|EGI99187.1| flagellar hook-associated protein 3 [Shigella boydii 3594-74] Length = 317 Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 110/356 (30%), Gaps = 56/356 (15%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + +++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFAIQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLAMDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNG----YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I D +AS+ N+ Sbjct: 175 -------TGDKIFDSITSNAVAEPDG--------SASETNL------------------- 200 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQG----LSGIIEQRAVLGISEKN 297 + + A + L +G L+ ++ RA LG Sbjct: 201 ----FAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSLNNVLAVRAELGTQLNE 256 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 257 LESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|170680479|ref|YP_001744097.1| flagellar hook-associated protein FlgL [Escherichia coli SMS-3-5] gi|170518197|gb|ACB16375.1| flagellar hook-associated protein 3 [Escherichia coli SMS-3-5] Length = 317 Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 112/352 (31%), Gaps = 48/352 (13%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNG----YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTESAPFSEVDGKYEGGAESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I S+ + +E N+ Sbjct: 175 -------TGDKIFDSIT-------------------SNAVAEPDGSASET-------NLF 201 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 + D A + T K ++ L+ ++ RA LG + Sbjct: 202 AMLDSAIAA-LKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESL 260 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 261 DSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|218704491|ref|YP_002412010.1| flagellar hook-associated protein FlgL [Escherichia coli UMN026] gi|293404367|ref|ZP_06648361.1| flgL [Escherichia coli FVEC1412] gi|298380147|ref|ZP_06989752.1| flagellar hook-associated protein 3 FlgL [Escherichia coli FVEC1302] gi|300899602|ref|ZP_07117841.1| flagellar hook-associated protein 3 [Escherichia coli MS 198-1] gi|331662489|ref|ZP_08363412.1| flagellar hook-associated protein 3 [Escherichia coli TA143] gi|218431588|emb|CAR12467.1| flagellar hook-filament junction protein [Escherichia coli UMN026] gi|291428953|gb|EFF01978.1| flgL [Escherichia coli FVEC1412] gi|298279845|gb|EFI21353.1| flagellar hook-associated protein 3 FlgL [Escherichia coli FVEC1302] gi|300356873|gb|EFJ72743.1| flagellar hook-associated protein 3 [Escherichia coli MS 198-1] gi|331060911|gb|EGI32875.1| flagellar hook-associated protein 3 [Escherichia coli TA143] Length = 317 Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 108/348 (31%), Gaps = 40/348 (11%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN TD G+Y+F+G + P + K +S Q + V Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEADGKYEGGAESIKQQVDA------------SRSMV 171 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++ D I D N D I Sbjct: 172 IGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAI----------------------- 208 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 A + T K ++ L+ ++ RA LG + Sbjct: 209 ----AALKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLG 264 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 265 SDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|191168484|ref|ZP_03030272.1| flagellar hook-associated protein 3 [Escherichia coli B7A] gi|190901503|gb|EDV61264.1| flagellar hook-associated protein 3 [Escherichia coli B7A] Length = 317 Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 111/352 (31%), Gaps = 48/352 (13%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN TD G+Y+F+G + P + K +S Q + V Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIRQQVDA------------SRSMV 171 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++ D I D +AS+ N+ Sbjct: 172 IGHTGDKIFDSITSNAVAEPDG--------SASETNL----------------------- 200 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQG----LSGIIEQRAVLGISEKNINEE 301 + + A + L +G L+ ++ R LG + Sbjct: 201 FAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSLNNVLTVRTGLGTQLNELESL 260 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 261 DSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|237750865|ref|ZP_04581345.1| flagellar hook-associated protein FlgL [Helicobacter bilis ATCC 43879] gi|229373310|gb|EEO23701.1| flagellar hook-associated protein FlgL [Helicobacter bilis ATCC 43879] Length = 850 Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 52/150 (34%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T + +M + + ++ ++ +G+ YG Q + L+ E ++ Sbjct: 1 MRVTFGTKY---NQMLNNNGNITSNLNDMNTKIASGKKIQYGWQDASVSNQNLKLEYDET 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + + L + + L+ A L + Sbjct: 58 TLQQGIDVARTAETQTLNTDKALQEISLAMVQFKTKLLHAANDLHTPTSREALARDLEAT 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 ++ AN + G+++F+G +P + Sbjct: 118 KAHIISIANTSVGGKFIFAGSKVDVQPFDS 147 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 41/121 (33%), Gaps = 6/121 (4%) Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 I+ + + D +++ + + + I + + G + Sbjct: 732 DDAIQSVRDGIYRAGALHGQRYDDTMKSLGIQNCIELIDHLSDHIEKVISKNGAHTRTFQ 791 Query: 300 EE---RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 ++ + + I +IG + + + + L N + T ++ LS++NY Sbjct: 792 NSVARNEIIKTQVSGIKG---DTIGADLAETYNKFTNLSNNYQAVLSSTNRINNLSLVNY 848 Query: 357 L 357 L Sbjct: 849 L 849 >gi|323703357|ref|ZP_08115007.1| flagellar hook-associated protein 3 [Desulfotomaculum nigrificans DSM 574] gi|323531720|gb|EGB21609.1| flagellar hook-associated protein 3 [Desulfotomaculum nigrificans DSM 574] Length = 307 Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 116/358 (32%), Gaps = 61/358 (17%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTG----QSSDYGLQLGARVTSILEWEQEKNH 61 +S + M ++ + S K E++ TG + SD ++ + + + Sbjct: 4 VSNILMANNMANYIQKNLQRSAKSQEQISTGKTIIRPSDNPSEISHLMAVNATIAGNEQY 63 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 L+ S L ++ K +QD + G + + Sbjct: 64 ARNIQDG----LAYLNQSDTALDTVGKYLQDAKTLALQAANGTLTDADREHIKEQVDKLI 119 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 ++ AN + G+YLF+G + P D + +D G + ++ +L Sbjct: 120 DAVKDIANSSLGGKYLFAGTKNDLPPFRRVDLPDGTTEIHYD----GNEQPVTREILFQA 175 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 EV+S A + S + + A+ N+K ++ I+ S Sbjct: 176 PYEVTSAGAGA-----NGVFGNLSGTKVIGGPF--AALINLKKNLEPGGDINQS------ 222 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 L+ + I+ +R +G +++ Sbjct: 223 --------------------------------LTELDNAHDAILTKRVGVGARTRHLEAV 250 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKI--EMSYMITTKLQKLSILNYL 357 + L+++ + + + G + A + N++ + S M + L S+L YL Sbjct: 251 KEQLEDQEVRLKSVLVDIQGADI--AKLTIEVAQNQLVHQASLMTASNLLNTSLLQYL 306 >gi|59712474|ref|YP_205250.1| flagellar hook-associated protein FlgL [Vibrio fischeri ES114] gi|46394803|gb|AAS91568.1| flagellar hook-associated protein 3 [Vibrio fischeri ES114] gi|59480575|gb|AAW86362.1| flagellar hook-associate protein 3, FlgL [Vibrio fischeri ES114] Length = 397 Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 53/403 (13%), Positives = 130/403 (32%), Gaps = 61/403 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSIL---EWEQEKNHI 62 IS+ ++ + ++ +G+ L G + L Q+K + Sbjct: 5 ISSFHNYQAVQNDISRQEAKVHHNSAQLASGKKL---LTAGDDPVAALYAQNLTQKKEEL 61 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + + +L RL + +++ ++ D ++ ++ G +A L+ Sbjct: 62 RQYTDTITLARNRLERHEVAIANAEQFADDAKRSVMEMINGSLAPEDRYAHAQDLKGIAS 121 Query: 123 SFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 +F+ NM D G YLFSG +P +F + Q L+ + +A Sbjct: 122 NFLNLTNMLDESGNYLFSGTKPKTQP---FFKANDGTVAYAGDEYQRKLKVSGSIEVAVN 178 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN-- 239 ++ + + +++ E S A++ N T + SA+ N Sbjct: 179 DAGSKLFT--EIKNPFGDYDPQYALQEGSELLLSQATNTNYTD--PATYEVSFSASANGQ 234 Query: 240 -------------------MRGIRD--------------------------IMFVAVIGT 254 GI+ I + Sbjct: 235 YNYQLSKDGSVVKNAQFDPSEGIKYEGVDIQIRGQLKSGDVITLEPKKTISIFDSFKKAS 294 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 E ++ D + +++ + + RA +G + ++++ Q+ + + Sbjct: 295 ELALNDVADASTTAELQQVTDEFHAAFIHLSQARAEVGTRQNTLDQQEQQHQDFDLTLSK 354 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S ++ A + + ++ S K++ +++ NY+ Sbjct: 355 SLSSIEDLDYAQAVIEFNENTRALQASQQAFGKVKDITLFNYV 397 >gi|90422998|ref|YP_531368.1| hypothetical protein RPC_1487 [Rhodopseudomonas palustris BisB18] gi|90105012|gb|ABD87049.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 525 Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 66/196 (33%), Gaps = 8/196 (4%) Query: 167 QGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRI 226 F + + + G + S+ Q+ + + + + ++ + RI Sbjct: 333 TDFFDNPPQRVAGGPNFAAST---TQVAGTAADTVIWYVGESDVSASQTDTARGTAVARI 389 Query: 227 KDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGAR---NVLTKKMLSTVQ--QGL 281 D + A N + +R + + + A L +++ + G Sbjct: 390 DDAITVRYGARANEQALRTQLQNVAVFAAVTTNITDVNANGKIAALNQRIAQNLAVIPGT 449 Query: 282 SGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 I + +A ++ +I I T + G+ ++ L ++ S Sbjct: 450 QTIQDIQADFAGAQSSIKATTDRQTQSKVISQTLLDSIEGINNDEVATKILALQTALQAS 509 Query: 342 YMITTKLQKLSILNYL 357 Y T+ L K+S++ +L Sbjct: 510 YQTTSDLYKMSLVKFL 525 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 56/182 (30%), Gaps = 8/182 (4%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 L L E++ +G+ S G+ + L + N + + + V R++ Sbjct: 17 ILNLRSQLDSLTEQLASGKISTTYAGQGSGRSMALGIRAQLNAYSSFADTATNVNTRINV 76 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 + L + I + G V DN + V N +YLF Sbjct: 77 ANLSLQRLVAINSTVKGAAVSAGSTI-DNTGQTAGQKTANLDFYDSVDMLNAQSGDRYLF 135 Query: 139 SGINSSEKP-------LNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQ 191 G + P LNG + K+ D+ Q L N+ + + Sbjct: 136 GGRITDAPPVAAADQILNGNGATIAGLKQVIDERKQADLGVNANGRVGTAIGAAPASTPT 195 Query: 192 QM 193 + Sbjct: 196 TV 197 >gi|218689036|ref|YP_002397248.1| flagellar hook-associated protein FlgL [Escherichia coli ED1a] gi|331672602|ref|ZP_08373391.1| flagellar hook-associated protein 3 [Escherichia coli TA280] gi|331682585|ref|ZP_08383204.1| flagellar hook-associated protein 3 [Escherichia coli H299] gi|218426600|emb|CAR07428.1| flagellar hook-filament junction protein [Escherichia coli ED1a] gi|281178192|dbj|BAI54522.1| flagellar hook-filament junction protein 3 FlgL [Escherichia coli SE15] gi|284920906|emb|CBG33969.1| flagellar hook-associated protein 3 [Escherichia coli 042] gi|323190595|gb|EFZ75867.1| flagellar hook-associated protein 3 [Escherichia coli RN587/1] gi|331070245|gb|EGI41611.1| flagellar hook-associated protein 3 [Escherichia coli TA280] gi|331080216|gb|EGI51395.1| flagellar hook-associated protein 3 [Escherichia coli H299] Length = 317 Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 117/348 (33%), Gaps = 40/348 (11%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN TD G+Y+F+G + P F E + K + ++ Sbjct: 124 LANTTDGNGRYIFAGYKTESAP---------------------FSEADGKYEGGAESIKQ 162 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++ M I DK D S S+ + +E N+ + D Sbjct: 163 QVDASRSMV--IGHTGDKIFD--------SITSNAVAEPDGSASET-------NLFAMLD 205 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 A + T K ++ L+ ++ RA LG + Sbjct: 206 SAIAA-LKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLG 264 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 265 SDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|258404736|ref|YP_003197478.1| flagellar hook-associated protein 3 [Desulfohalobium retbaense DSM 5692] gi|257796963|gb|ACV67900.1| flagellar hook-associated protein 3 [Desulfohalobium retbaense DSM 5692] Length = 292 Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 97/357 (27%), Gaps = 65/357 (18%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S+ M +N+ + L ++ TG+ + V IL + + Sbjct: 1 MRVTLASSFQF---MQTEIGRINEKTADLQKQAATGKKINEVSDDPTAVRPILNYRTQIE 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + L L ++ V G + ++ Sbjct: 58 SSDRYTRNMDAAKTGLKNYDYQLGRAFDLLVQAKEQTVAAGNGALRDEDMATMGKIVEGL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 E + AN +G+Y+F+G KP T + + + Sbjct: 118 REELLGVANSQSDGRYIFAGYEEDTKPFADDGTFNGDD----NTRTLEIAPGEEVDISVS 173 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +S + + ++ + D I + Sbjct: 174 GKEVFASTTPDNIFETLQNISTAMKDPAI---------------EIDSNDV--------- 209 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 + + + ST + I + + EK + + Sbjct: 210 -----------------------ESLQEVMDTVSSTRADVGTRINRLESAVSYREKAVLD 246 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++S + +QL ++ + +TTK+ +LS+L+Y+ Sbjct: 247 -----------MKEFLSDYEDADIVEVSSQLMQQETSLKAALAVTTKIGQLSLLDYM 292 >gi|16764540|ref|NP_460155.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197263254|ref|ZP_03163328.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|120305|sp|P16326|FLGL_SALTY RecName: Full=Flagellar hook-associated protein 3; Short=HAP3; AltName: Full=Hook-filament junction protein gi|47682|emb|CAA36028.1| HAP3 [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16419701|gb|AAL20114.1| hook-filament junction protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197241509|gb|EDY24129.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|261246395|emb|CBG24204.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992958|gb|ACY87843.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157725|emb|CBW17217.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912171|dbj|BAJ36145.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223802|gb|EFX48865.1| Flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129454|gb|ADX16884.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 317 Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 113/349 (32%), Gaps = 40/349 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++E+ + +KL E+M TG+ + + Q + ++ Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLSQAQAQNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S ++ LS + +Q +V G ++ A L+ + + Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F+G + P + +KS Q + Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQ------------QVDSARTM 170 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V Q+ + I D N D I Sbjct: 171 VIGHTGAQIFNSITSNAVPEPDGSDSEKNLFVMLDTAI---------------------- 208 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 A + T N+ K ++ L+ ++ RA LG ++ Sbjct: 209 -----AALKTPVEGNNVEKEKAAAAIDKTNRGLKNSLNNVLTVRAELGTQLSELSTLDSL 263 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ ++ + ++ SY T +Q +S+ Sbjct: 264 GSDRALGQKLQMSNLVDVDWNSVISSYVMQQAALQASYKTFTDMQGMSL 312 >gi|315657527|ref|ZP_07910409.1| flagellar hook-associated protein 3 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491999|gb|EFU81608.1| flagellar hook-associated protein 3 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 327 Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 126/356 (35%), Gaps = 30/356 (8%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ++TS + + ++++ +G+ + A S + +E Sbjct: 1 MITRMTTSMMAGTTLSTIQRNFNRLADANKKLSSGKRMSFASDDPASSVSSMRLRKELAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + S L+TS A + S+ + + L+ ++G + A LR Sbjct: 61 TEQYKRNISDANSWLATSDAAMQSVAERYTEARTLLINSIDGALGSQSQGALAAQLRKVA 120 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 ES ++ AN T G+ +F+G NS + + + + + LA + Sbjct: 121 ESIMSQANATYLGRTVFAG-NSDKG-----------------LVFKTGSDGHDTIFLAAE 162 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 E+++ + D ++ ++ + D + + + N Sbjct: 163 KDEITAKTVDRRIDADTTVQANLDGNKLFGTGTIKWDD---------NDKTKLDTDNNPS 213 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 + ++ A I + ++ + + + + + + E ++ +G K + E Sbjct: 214 VMNLLVEAAKILESPTGPVGDNRSK---IESIQKELTERFAKLQEAQSAVGARHKQVLEA 270 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + IS ++ +A +S + S T ++ + ++L+YL Sbjct: 271 QENVIFDLEQVKGQISSVEDIDILSATIDMSLASMAYQSSLGSTQRVVQPTLLDYL 326 >gi|167994048|ref|ZP_02575140.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205328028|gb|EDZ14792.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|332988075|gb|AEF07058.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 317 Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 113/349 (32%), Gaps = 40/349 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++E+ + +KL E+M TG+ + + Q + ++ Sbjct: 3 ISTQMMYEQNMNGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLSQAQAQNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S ++ LS + +Q +V G ++ A L+ + + Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F+G + P + +KS Q + Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQ------------QVDSARTM 170 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V Q+ + I D N D I Sbjct: 171 VIGHTGAQIFNSITSNAVPEPDGSDSEKNLFVMLDTAI---------------------- 208 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 A + T N+ K ++ L+ ++ RA LG ++ Sbjct: 209 -----AALKTPVEGNNVEKEKAAAAIDKTNRGLKNSLNNVLTVRAELGTQLSELSTLDSL 263 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ ++ + ++ SY T +Q +S+ Sbjct: 264 GSDRALGQKLQMSNLVDVDWNSVISSYVMQQAALQASYKTFTDMQGMSL 312 >gi|331269280|ref|YP_004395772.1| putative flagellar hook-associated protein 3 [Clostridium botulinum BKT015925] gi|329125830|gb|AEB75775.1| putative flagellar hook-associated protein 3 [Clostridium botulinum BKT015925] Length = 474 Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%) Query: 25 DSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLS 84 + K+ ++ +G+ V ++ + N + + + V+ L T+ L Sbjct: 22 NINKIQQQNTSGKKFRKPSDDPFAVARSMQLHTDINTNKQYSKNITDVSNWLDTTDTALG 81 Query: 85 SMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSS 144 + Q + L+ G ++ + + N G Y+F G S+ Sbjct: 82 QAGNVFQRVRELLISAGNGGYTESERRAIKDEINEKVREISQILNTNFGGNYIFGGTRST 141 Query: 145 EKPL 148 KP+ Sbjct: 142 TKPI 145 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 39/101 (38%) Query: 257 LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYI 316 + A L K L V ++ +++ RA +G + I ++ + + Sbjct: 373 GTDIKNPNAIKDLLTKDLQDVTDTINNLLKIRAEVGAKQNRIEGANDRNKDGTFNMTKIL 432 Query: 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 SK V +T++ S + K+ + S+++YL Sbjct: 433 SKHEDVNYTENMTDYATMLTVYMASLQTSAKIIQPSLMDYL 473 >gi|226314924|ref|YP_002774820.1| flagellar hook-associated protein 3 [Brevibacillus brevis NBRC 100599] gi|226097874|dbj|BAH46316.1| flagellar hook-associated protein 3 [Brevibacillus brevis NBRC 100599] Length = 300 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 43/346 (12%), Positives = 103/346 (29%), Gaps = 58/346 (16%) Query: 12 FERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSL 71 + L + + KL ++ +G + + + + + Sbjct: 12 SNMLRNLHNSMR-NMDKLQHQLASGSKIEKPSDDPVVAARGMFYRSSLMENDQYKRNVDE 70 Query: 72 VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT 131 + + + + +++ + L+ +G + +++ T AN Sbjct: 71 AKSWMDMTDGTMDEVGNVMKRVKELLIYSADGAISPDDLKTMGSEIQELKNHLGTLANQQ 130 Query: 132 DEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQ 191 G+Y+F+G ++++ P + S + ++ S++NAQ Sbjct: 131 INGKYIFAGTDTNKAPYDLTANGGKGDFVSTNSSPINL-------EVSQNVFVTSNINAQ 183 Query: 192 QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAV 251 + +F ANN A D+ I Sbjct: 184 NIFNFPDN-----------ANNMFKALDNIIT---------------------------- 204 Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 L +G + + Q ++ +RA LG S + L + Sbjct: 205 --------ELNNGRSAAQFQPAI---NQQYDKLLAERASLGASVNRVELIAERLNTQEVG 253 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I +SK+ + L T + + ++ + S+L++L Sbjct: 254 ITGLLSKNEDADMAKVMTNLKTQESVHSAALGSGARIIQPSLLDFL 299 >gi|90579917|ref|ZP_01235725.1| flagellar hook-associated protein [Vibrio angustum S14] gi|90438802|gb|EAS63985.1| flagellar hook-associated protein [Vibrio angustum S14] Length = 411 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 48/411 (11%), Positives = 140/411 (34%), Gaps = 63/411 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEW---EQEKNHI 62 +ST+S ++ + + + + ++ TG+ + G S + Q+ I Sbjct: 5 VSTASQYQSLTSNLMRKQGEVNESNNQLSTGKRVE---TAGDDPVSSVTIQNYRQQLTQI 61 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + S ++ RL ++ ++ ++ + ++ ++ G +N L + Sbjct: 62 DQYKSSITMANNRLGVMESSIAGVEDNLDAAKQKVLRMINGAMASNDRTAFKDELTSLRD 121 Query: 123 SFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 + AN D G Y+F+G +P T + + Q ++++ + + Sbjct: 122 GLLELANSRDESGNYVFAGNQMDTQPFV-KGTDGKMNYQGDSQSRYAQIDKSVEVKTSLP 180 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDD-----EYWANNWSNAS------DHNIKYRIKDTE 230 ++ + DF D S ++++ A + + +E Sbjct: 181 GDQLFTSIPNPYGDFRPDFSDLSSGSKLHVLSATTSDFTKAQPIDIAFSEAVVTQPDGSE 240 Query: 231 GIDVSANVN--------------MRGIRDIMFVAVIGT---------------------- 254 + N++ +G++ + Sbjct: 241 KTVMQYNLSLDGKEVVADQDYDPEKGVQYTAADGSSVSITLDDVEVGDKLTLNPAQKINI 300 Query: 255 -EFLSKNLTDGARNVLTKKMLSTVQQGLSGI-------IEQRAVLGISEKNINEERVFLQ 306 + L + + + + +T+Q+ + I ++R+ +G + + ++ Sbjct: 301 FDSLQDAIDNAEKPTSSAAAEATLQRVIDDIDSSFLHVSQRRSEVGTIMQQVERQQEQHL 360 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +++ S ++ A +++ + ++ S +K ++LS+ NYL Sbjct: 361 DFELTLNSAQSGLEDLDYSKAIMEMNQQMMALQASQSAFSKTKQLSLFNYL 411 >gi|218700415|ref|YP_002408044.1| flagellar hook-associated protein FlgL [Escherichia coli IAI39] gi|218370401|emb|CAR18206.1| flagellar hook-filament junction protein [Escherichia coli IAI39] Length = 317 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 118/348 (33%), Gaps = 40/348 (11%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVFSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN TD G+Y+F+G + P F E + K + ++ Sbjct: 124 LANTTDGNGRYIFAGYKTESAP---------------------FSEADGKYEGGAESIKQ 162 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++ M I DK D S S+ + +E N+ + D Sbjct: 163 QVDASRSMV--IGHTGDKIFD--------SITSNAVAEPDGSASET-------NLFAMLD 205 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 A + T K ++ L+ ++ RA LG + Sbjct: 206 SAIAA-LKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLG 264 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 265 SDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|218694617|ref|YP_002402284.1| flagellar hook-associated protein FlgL [Escherichia coli 55989] gi|307310139|ref|ZP_07589789.1| flagellar hook-associated protein 3 [Escherichia coli W] gi|218351349|emb|CAU97055.1| flagellar hook-filament junction protein [Escherichia coli 55989] gi|306909857|gb|EFN40351.1| flagellar hook-associated protein 3 [Escherichia coli W] gi|315060361|gb|ADT74688.1| flagellar hook-filament junction protein [Escherichia coli W] gi|320200979|gb|EFW75563.1| Flagellar hook-associated protein FlgL [Escherichia coli EC4100B] gi|323379078|gb|ADX51346.1| flagellar hook-associated protein 3 [Escherichia coli KO11] Length = 317 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 113/352 (32%), Gaps = 48/352 (13%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNG----YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I S+ + +E N+ Sbjct: 175 -------TGDKIFDSIT-------------------SNAVAEPDGSASET-------NLF 201 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 + D A + T K ++ L+ ++ RA LG + Sbjct: 202 AMLDSAIAA-LKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESL 260 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 261 DLLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|149194322|ref|ZP_01871419.1| flagellar hook-associated protein L [Caminibacter mediatlanticus TB-2] gi|149135497|gb|EDM23976.1| flagellar hook-associated protein L [Caminibacter mediatlanticus TB-2] Length = 846 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 43/129 (33%) Query: 24 KDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 + K E+ TG+ + L+ + E N + S + S L Sbjct: 8 SELNKTQTELSTGKKIQNLYDNSTIYNNYLKLDTEINTFTQIKSSANFALNFARESDTTL 67 Query: 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINS 143 + + + + L+ D L+ AN + G+Y+FSG Sbjct: 68 NDIVSTLTNFKTKLINAANDTNDITSREAIVSELKGELNHLKDLANSSINGKYIFSGSAF 127 Query: 144 SEKPLNGYF 152 + KP++ F Sbjct: 128 NIKPIDDDF 136 Score = 40.8 bits (94), Expect = 0.34, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 55/139 (39%), Gaps = 1/139 (0%) Query: 219 DHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQ 278 D NI ++ ++ ID ++ + G F + N ++ R++ + + + Sbjct: 708 DSNIYFQANNSLTIDSPQVDFFETLQKAISSVENGENFANAN-SNNPRDIGIQGAIKAID 766 Query: 279 QGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKI 338 L + A +G + + ++T S++I + A +L++L Sbjct: 767 HVLDRVRRSHAKIGAVSNEFDMTIQRVDMLKVNVETLQSENIDTDIGEASMKLNSLQLSY 826 Query: 339 EMSYMITTKLQKLSILNYL 357 + K+ L++LNYL Sbjct: 827 QALLASIAKINNLTLLNYL 845 >gi|150019109|ref|YP_001311363.1| flagellar hook-associated protein 3 [Clostridium beijerinckii NCIMB 8052] gi|149905574|gb|ABR36407.1| flagellar hook-associated protein 3 [Clostridium beijerinckii NCIMB 8052] Length = 327 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 115/340 (33%), Gaps = 30/340 (8%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 K + L ++ +G S + T I++ E + + VT L T Sbjct: 17 MKRNLGNMSTLQNQLSSGNSITRASDNPSTATRIMQLNSEIAANKQYNSNIKDVTNWLDT 76 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 + LS + + +V G ++ + N + +G Y+F Sbjct: 77 TDTALSEAGNVFSRIRELMVKAGNGAYGKDEISNIKDEIVQKVAQLGDILNSSFDGNYIF 136 Query: 139 SGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 G S+ KP+ + D+ F + + + ++++ +++ + Sbjct: 137 GGTKSTSKPV---VANSDGSISYLDKNGTAFTGTSGTAADPNAYTQINTKLTAEISTGVT 193 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN-MRGIRDIMFVAVIGTEFL 257 + ++ T+ D +VN ++DI+ Sbjct: 194 IEY-----------------NQTSTNILEFTDT-DSGTSVNASDVLKDIVNNL------- 228 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 N T + +T L+ + + + + R+ +G + ++ + +++N + + +S Sbjct: 229 -SNPTATNLSTVTGSDLTKMDYIIKNVQKCRSTVGAMQNRMDSAQATNEDQNYNMTSILS 287 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + V+ + S S + K+ ++L+YL Sbjct: 288 EVGDVDYTQKTMEYSVAQTVYTASLQTSAKVLTKTLLDYL 327 >gi|322714171|gb|EFZ05742.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 317 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 113/349 (32%), Gaps = 40/349 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++E+ + +KL E+M TG+ + + Q + ++ Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLSQAQAQNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S ++ LS + +Q +V G ++ A L+ + + Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F+G + P + +KS Q + Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQ------------QVDSARTM 170 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V Q+ + I D N D I Sbjct: 171 VIGHTGAQIFNSITSHAVPEPDGSDSEKNLFVMLDTAI---------------------- 208 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 A + T ++ K ++ L+ ++ RA LG ++ Sbjct: 209 -----AALKTPVEGNDVEKEKAAAAIDKTNRGLKNSLNNVLTVRAELGTQLSELSTLDSL 263 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ ++ + ++ SY T +Q +S+ Sbjct: 264 GSDRALGQKLQMSNLVDVDWNSVISSYVMQQAALQASYKTFTDMQGMSL 312 >gi|116694226|ref|YP_728437.1| flagellar hook-associated protein FlgL [Ralstonia eutropha H16] gi|113528725|emb|CAJ95072.1| flagellar hook-associated protein 3 [Ralstonia eutropha H16] Length = 409 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 56/408 (13%), Positives = 112/408 (27%), Gaps = 57/408 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +++S+++++ + + +++ TG+S T L Q + + Sbjct: 3 VASSTLYQQGLASMNYQQGSLLHIQQQLGTGRSILTPSDDPVGATRALGVSQAQAVNGQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 S L+ + L S+ + Q++ LV G + A L Y V Sbjct: 63 ATSRKQANIALAAEENALQSVTTVTQNIQTLLVQAGNGTMSDADRGSLATALEGLYNQLV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDS---------------------------- 156 AN D GQYLF G S P + Sbjct: 123 GLANSDDGNGQYLFGGTRSGSAPFTQSKGPGAYIGDNGQQLLQVDVARQMPAGNTGREVF 182 Query: 157 -------------LAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN--AQQMTDFIKQLE 201 A + N G ++V+ + QM I L Sbjct: 183 MSVTGGAGYVVKGNANNTGSATFGTVSTTNPSDPDYGLSMQVTFAANASGQMEYTITDLS 242 Query: 202 DKFSDDE---YWANNWSNAS------DHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVI 252 + S A N+ KD + + A + G + + Sbjct: 243 AGTTPAPVVKGPIAYTSPAHIDVAGVSFNVTGDPKDGDTM-TMAPASEAGTDMFANLQTV 301 Query: 253 GTEFLSKNLTDGARN---VLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKN 309 R + L ++ RA +G ++ N++ Sbjct: 302 IDTLRQPTPDSSDRAHLGNVISTATRQFSNSLDNVLTVRASVGSRMNELDALDDVGSNRD 361 Query: 310 NIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S ++ A + ++ + ++Q +++ YL Sbjct: 362 LTYSQTLSGLQDLDYAKAITEYYQRQTALQGAQQSFMQIQGMNLFKYL 409 >gi|326792654|ref|YP_004310475.1| flagellar hook-associated protein 3 [Clostridium lentocellum DSM 5427] gi|326543418|gb|ADZ85277.1| flagellar hook-associated protein 3 [Clostridium lentocellum DSM 5427] Length = 393 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 108/348 (31%), Gaps = 39/348 (11%) Query: 49 VTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN 108 ++ + + + + ++ + +M KI++ + V G + Sbjct: 46 AGRAIKLKVNVLETQQYQKNAKEARSWMEVTETSMDNMNKILESIRTKCVQASTGTLEEK 105 Query: 109 KFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPL--------------NGYFTK 154 + + +E AN+T G+Y++SG +SE + Y Sbjct: 106 DKAVIKTDIMQLWEQLQEEANVTYGGRYVYSGYKTSEPLMLNKDLTLEEDLLVEKEYTVS 165 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFI-----KQLEDKFSDDEY 209 + + +G + G + + + DF L+ + + E Sbjct: 166 SGTTIAAGSILAKGSTVSKADRATLGITDAMLDADGKLGADFTVPTGGTTLKGELTLSEN 225 Query: 210 WA--------------NNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMF------V 249 ++ S ++Y + I V+ +++ Sbjct: 226 SKLASGSTVTAGNINPKVYNQISGQEMRYEVGTGNTITVNTLGMDDTFNNLLQMMEEIVT 285 Query: 250 AVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKN 309 V + +T + L + + + L+ I + A LG ++ L + N Sbjct: 286 TVDSSLEAGSTITSDDLHNLFNDKIGEIDEVLADISTKTADLGSRMARLDYVDSRLTDNN 345 Query: 310 NIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S + ++ + + ++ + T+K+ ++ +YL Sbjct: 346 ADYKELLSNTEDIDVEEVYVEFNSRYATYTAALQATSKVIMNTLADYL 393 >gi|323967024|gb|EGB62450.1| flagellar hook protein 3 [Escherichia coli M863] gi|327253482|gb|EGE65120.1| flagellar hook-associated protein 3 [Escherichia coli STEC_7v] Length = 317 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 53/348 (15%), Positives = 118/348 (33%), Gaps = 40/348 (11%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGIRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN TD G+Y+F+G + P F E + + + + ++ Sbjct: 124 LANTTDGNGRYIFAGYKTETAP---------------------FSEADGEYVGGAESIKQ 162 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++ M I DK D S S+ + +E N+ + D Sbjct: 163 QVDASRSMV--IGHTGDKIFD--------SITSNAVAEPDGSASET-------NLFAMLD 205 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 A + T K ++ L+ ++ RA LG + Sbjct: 206 SAIAA-LKTPVAESEADKETTAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLG 264 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 265 SDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|197335705|ref|YP_002156693.1| flagellar hook-associated protein 3 [Vibrio fischeri MJ11] gi|197317195|gb|ACH66642.1| flagellar hook-associated protein 3 [Vibrio fischeri MJ11] Length = 397 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 53/403 (13%), Positives = 130/403 (32%), Gaps = 61/403 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSIL---EWEQEKNHI 62 IS+ ++ + ++ +G+ L G + L Q+K + Sbjct: 5 ISSFHNYQAVQNDISRQEAKVHHTSAQLASGKKL---LTAGDDPVAALYAQNLTQKKEEL 61 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + + +L RL + +++ ++ D ++ ++ G +A L+ Sbjct: 62 RQYTDTITLARNRLERHEVAIANAEQFADDAKRSVMEMINGSLAPEDRYAHAQDLKGIAS 121 Query: 123 SFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 +F+ NM D G YLFSG +P +F + Q L+ + +A Sbjct: 122 NFLNLTNMLDESGNYLFSGTKPKTQP---FFKSNDGTVAYAGDEYQRKLKVSGSIEVAVN 178 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN-- 239 ++ + + +++ E S A++ N T + SA+ N Sbjct: 179 DAGSKLFT--EIKNPFGDYDPQYALQEGSELLLSQATNTNYTD--PATYEVSFSASANGQ 234 Query: 240 -------------------MRGIRD--------------------------IMFVAVIGT 254 GI+ I + Sbjct: 235 YNYQLSKDGSVVKNAQFDPSEGIKYEGVDIQIRGQLKSGDVITLEPKKTISIFDSFKKAS 294 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 E ++ D + +++ + + RA +G + ++++ Q+ + + Sbjct: 295 ELALNDVADASTTAELQQVTDEFHAAFIHLSQARAEVGTRQNTLDQQEQQHQDFDLTLSK 354 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S ++ A + + ++ S K++ +++ NY+ Sbjct: 355 SLSSIEDLDYAQAVIEFNENTRALQASQQAFGKVKDITLFNYV 397 >gi|323976544|gb|EGB71632.1| flagellar hook protein 3 [Escherichia coli TW10509] Length = 317 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 53/348 (15%), Positives = 118/348 (33%), Gaps = 40/348 (11%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGIRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN TD G+Y+F+G + P F E + + + + ++ Sbjct: 124 LANTTDGNGRYIFAGYKTETAP---------------------FSEADGEYVGGAESIKQ 162 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++ M I DK D S S+ + +E N+ + D Sbjct: 163 QVDASRSMV--IGHTGDKIFD--------SITSNAVAEPDGSASET-------NLFAMLD 205 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 A + T K ++ L+ ++ RA LG + Sbjct: 206 SAIAA-LKTPVAESEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLG 264 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 265 SDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|56413829|ref|YP_150904.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179701|ref|YP_216118.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614592|ref|YP_001588557.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167553028|ref|ZP_02346778.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168234110|ref|ZP_02659168.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168244783|ref|ZP_02669715.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264023|ref|ZP_02685996.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467137|ref|ZP_02700979.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822628|ref|ZP_02834628.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445556|ref|YP_002040438.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450508|ref|YP_002045183.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469278|ref|ZP_03075262.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197248976|ref|YP_002146859.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197362752|ref|YP_002142389.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198242414|ref|YP_002215953.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389316|ref|ZP_03215927.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204930742|ref|ZP_03221615.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207857308|ref|YP_002243959.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224584312|ref|YP_002638110.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238910996|ref|ZP_04654833.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|56128086|gb|AAV77592.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127334|gb|AAX65037.1| flagellar biosynthesis; hook-filament junction protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161363956|gb|ABX67724.1| hypothetical protein SPAB_02342 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404219|gb|ACF64441.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408812|gb|ACF69031.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455642|gb|EDX44481.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195630416|gb|EDX49042.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094229|emb|CAR59734.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212679|gb|ACH50076.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197936930|gb|ACH74263.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199601761|gb|EDZ00307.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320201|gb|EDZ05405.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205322419|gb|EDZ10258.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205331930|gb|EDZ18694.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336402|gb|EDZ23166.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205341000|gb|EDZ27764.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347330|gb|EDZ33961.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709111|emb|CAR33444.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468839|gb|ACN46669.1| flagellar hook-associated protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|320086376|emb|CBY96149.1| Flagellin A Flagellin core protein [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322616554|gb|EFY13463.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620505|gb|EFY17369.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622499|gb|EFY19344.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629650|gb|EFY26425.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632630|gb|EFY29376.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636875|gb|EFY33578.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641587|gb|EFY38225.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646486|gb|EFY42996.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650023|gb|EFY46441.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653948|gb|EFY50271.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658480|gb|EFY54742.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663338|gb|EFY59540.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670072|gb|EFY66212.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674864|gb|EFY70955.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676666|gb|EFY72733.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682588|gb|EFY78607.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686659|gb|EFY82638.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195773|gb|EFZ80949.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198335|gb|EFZ83439.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204843|gb|EFZ89837.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209184|gb|EFZ94121.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213432|gb|EFZ98228.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217856|gb|EGA02571.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222144|gb|EGA06528.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224916|gb|EGA09174.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229658|gb|EGA13781.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232883|gb|EGA16979.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240618|gb|EGA24660.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242932|gb|EGA26953.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250250|gb|EGA34139.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252624|gb|EGA36462.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258848|gb|EGA42501.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261037|gb|EGA44630.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266946|gb|EGA50431.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269987|gb|EGA53436.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623701|gb|EGE30046.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 317 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 113/349 (32%), Gaps = 40/349 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++E+ + +KL E+M TG+ + + Q + ++ Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLSQAQAQNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S ++ LS + +Q +V G ++ A L+ + + Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F+G + P + +KS Q + Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQ------------QVDSARTM 170 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V Q+ + I D N D I Sbjct: 171 VIGHTGAQIFNSITSNAVPEPDGSDSEKNLFVMLDTAI---------------------- 208 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 A + T ++ K ++ L+ ++ RA LG ++ Sbjct: 209 -----AALKTPVEGNDVEKEKAAAAIDKTNRGLKNSLNNVLTVRAELGTQLSELSTLDSL 263 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ ++ + ++ SY T +Q +S+ Sbjct: 264 GSDRALGQKLQMSNLVDVDWNSVISSYVMQQAALQASYKTFTDMQGMSL 312 >gi|188534163|ref|YP_001907960.1| Flagellar hook-associated protein 3 [Erwinia tasmaniensis Et1/99] gi|188029205|emb|CAO97077.1| Flagellar hook-associated protein 3 [Erwinia tasmaniensis Et1/99] Length = 321 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 113/349 (32%), Gaps = 36/349 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST I+++ + N +K EM TG + + Q + ++ Sbjct: 3 LSTGMIYDQQMQGIQSANSSWLKAGNEMTTGNRVNKPSDDPVAAAQAVVVSQAQAETSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + T+ ST + L + ++ +V G + A L + Sbjct: 63 DTARIFATQSQSTEETTLKQVADVIISAQTTIVAAANGTLSDADRSSYATQLEGVRAQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y F+G S + P + ++ + Sbjct: 123 NLANSTDGNGRYTFAGYQSDKAPFTTDASGNTTYTGG---------TVPITQKVDSSRTL 173 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V++ +Q+ D + K D + +N + D IK + G D S Sbjct: 174 VTNHTGKQVFDNLTSSATKEPDGKDGESNIFSILDTAIKSLKEPLSGADQS--------- 224 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + K + L+ + R+ +G + + ++ Sbjct: 225 -----------------KIDLESANIAKTNRGLSNALNNVSSVRSEIGTNLQELSNLDSK 267 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + T ++ IGV+ A + + ++ SY + ++ KLS+ Sbjct: 268 SGDTTLNLKTQMNSLIGVDTAEAISSYTMQQAALKASYTVFQQMSKLSL 316 >gi|242310433|ref|ZP_04809588.1| flagellar hook-protein FlgL [Helicobacter pullorum MIT 98-5489] gi|239522831|gb|EEQ62697.1| flagellar hook-protein FlgL [Helicobacter pullorum MIT 98-5489] Length = 874 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 50/151 (33%), Gaps = 8/151 (5%) Query: 61 HIAERLHSNSLVTKRLSTSQ---AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 +I S L L+ ++ LS + + + LV A L Sbjct: 54 NITTLTQSKELANNALTFTKHTDTALSELASSMDNFKSKLVQGANDIHSETSRLAIAQDL 113 Query: 118 RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSL 177 + + F++ AN + G+++F G ++ KP N + + + L L N+ Sbjct: 114 KSIRDHFLSIANTSIGGEFIFGGTATTTKPFNSDGSYNGN-----NATLNALLSSNNSLA 168 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSDDE 208 E+ + I KF+ Sbjct: 169 YNITGYELFFGSDNDTNRVISTNIPKFNQSA 199 >gi|34556921|ref|NP_906736.1| flagellar hook-associated protein FlgL [Wolinella succinogenes DSM 1740] gi|34482636|emb|CAE09636.1| FLAGELLIN B HOMOLOG (FLA) [Wolinella succinogenes] Length = 846 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 69/199 (34%), Gaps = 6/199 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ S+ + + +L L +M +G+ +G Q + L + E+ Sbjct: 1 MRIGY-SSQYLTLARYQQSSQLQ--LNDLLTQMSSGRKIQFGYQDSTIYSQTLRLDYEEA 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + ++ + + LS + K + + L A L+ Sbjct: 58 TLTQSKTLSTSAKSFSDNTDSALSELSKSMTNFTTKLNQAANQIHSATSLEALANDLQAI 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLN---GYFTKDSLAKKSFDQMLQGFLEENSKSL 177 E ++ AN + GQY+FSG + KP + Y+ DS + L Sbjct: 118 KEHMLSIANTSIGGQYIFSGTAVTTKPFDSNGNYYGNDSSLEALLGSNNLLGYNITGAEL 177 Query: 178 LAGQHLEVSSMNAQQMTDF 196 G+ + S + + ++ Sbjct: 178 FGGKDSDKSRIIVTNVKNY 196 >gi|218549189|ref|YP_002382980.1| flagellar hook-associated protein FlgL [Escherichia fergusonii ATCC 35469] gi|218356730|emb|CAQ89358.1| flagellar hook-filament junction protein [Escherichia fergusonii ATCC 35469] gi|324113878|gb|EGC07852.1| flagellar hook protein 3 [Escherichia fergusonii B253] gi|325497609|gb|EGC95468.1| flagellar hook-associated protein FlgL [Escherichia fergusonii ECD227] Length = 317 Score = 58.6 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 115/350 (32%), Gaps = 42/350 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++++ + +K E+M TG+ + + Q + + Sbjct: 3 ISTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVINPSDDPIAASQAVVLSQAQAQNNQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S + LS + +Q+ +V G ++ A L+ + + Sbjct: 63 ALARTFATQKVSLEENVLSQVTTALQNAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F+G + P + + + K+S Q + Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQASGEYNGGKESITQQVDA------------SRSM 170 Query: 185 VSSMNAQQMTD-FIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 V ++ D F + + N + + +D + Sbjct: 171 VIGHTGDKIFDHFTSNAIPEPAGSTQETNLF---------------KMLDSAIGA----- 210 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + T + K ++ L+ ++ RA LG ++ Sbjct: 211 --------LKTPVAENETEKEKAAGIIDKTNRGLKNSLNNVLTVRAELGTQLSELDALDS 262 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S I V+ + A + ++ SY T +Q +S+ Sbjct: 263 LGSDRALGQTQQMSDLINVDWNAAISSYVMQQAALQASYKAFTDMQGMSL 312 >gi|225851147|ref|YP_002731381.1| flagellar hook-associated protein 3 [Persephonella marina EX-H1] gi|225646101|gb|ACO04287.1| flagellar hook-associated protein 3 [Persephonella marina EX-H1] Length = 321 Score = 58.6 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 117/360 (32%), Gaps = 50/360 (13%) Query: 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHI 62 + T ++R+ KD + +E+ +G+ L +++ N I Sbjct: 6 ISFFDTFIKYDRIR------EKDIERYTKELASGKKLLSPSDNTIDTVRSLRFKRLNNDI 59 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDSY 121 + LV L +++ L ++ Q++ ++ ++ G D I L Sbjct: 60 ETYNRNIDLVKGTLDVAESTLGNIVNAGQEVRVEIIRLMNTGVLDYEDAQILRDYLSSLR 119 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 + + AN++ +F G+ S P + + +E N+ Sbjct: 120 DYIINQANVSIGDSRIFGGVKSQIDPFDPVTGVYQGETVETTVPVAKGVELNTTFNGQSY 179 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ M D I ++ AS +++ ++ V+ + Sbjct: 180 LGVNTNTGKMAMVDAIDEIISIIDG----------ASASPPTRSLEEINTATINVTVDGK 229 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 ++ +L GL +++QR+ +G E+ + + Sbjct: 230 NYGNV-------------------------TILEAFDIGLDKVMQQRSKIG--EQMVIAD 262 Query: 302 RVFLQNKNNIIDTY----ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L+ +N+ + ISK + ++L E + + LS+L ++ Sbjct: 263 N--LKVQNDTMRVNFSELISKLEDADYAGVISELEKSKTAYEALLASIAQNKDLSLLKFI 320 >gi|238764399|ref|ZP_04625349.1| Flagellar hook-associated protein 3 [Yersinia kristensenii ATCC 33638] gi|238697425|gb|EEP90192.1| Flagellar hook-associated protein 3 [Yersinia kristensenii ATCC 33638] Length = 360 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 116/349 (33%), Gaps = 31/349 (8%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS ++++ ++ +++ TG+ + + Q ++ + Sbjct: 37 LSTSMLYQQNMQGITNAQSLWMQSGQQLSTGKRVVNPSDDPMSASQAVMVSQAQSENNQY 96 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + S L+ +Q + ++ ++ A L+ + V Sbjct: 97 ALARSFARQSSSLETTVLAQATSTIQSIQSVIISAKSDILSDDDRASYATQLQGLKDQLV 156 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F G S + P T + D ++ ++ N + Sbjct: 157 NQANTTDGNGRYIFGGFQSDKPPFAVSKT-GEVTYVGGDVAIEQKVDANRSMTVGHTG-- 213 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + + N + + + I + ID N ++ Sbjct: 214 -------------DSVFMALTSNAKPEPNDVDGKPVDAEKNIFN--TIDTVLNALKTPMQ 258 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + N K + + L+ ++ +A +G + ++ Sbjct: 259 ------------GATDEVKEQVNAAMDKGIRGMANSLNNVLSVQAGIGTQLQELDNLDSL 306 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 +++ I +S + V+ ++A + ++ SY T +Q LS+ Sbjct: 307 GEDRTLINKQRMSDLVDVDWNSAISSYVMQQAALQASYTTFTNMQGLSL 355 >gi|311280010|ref|YP_003942241.1| flagellar hook-associated protein 3 [Enterobacter cloacae SCF1] gi|308749205|gb|ADO48957.1| flagellar hook-associated protein 3 [Enterobacter cloacae SCF1] Length = 316 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 115/352 (32%), Gaps = 47/352 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST ++++ ++ E+M TG+ + + + Q + A+ Sbjct: 3 VSTLMMYQQNMNGITNSQSTWLQYGEQMSTGKRVNRPSDDPIAASQAVVLSQAQAQNAQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S T+R+S + L+ + +Q +V +G ++ A L+ + + Sbjct: 63 ASARSFATQRVSQEENVLTQVTTAIQSAQEKIVYAGDGTLSDDDRASLATDLQGIRDQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN---GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN D G+Y+F+G + P + Y + ++ D + Sbjct: 123 NLANSQDGNGRYMFAGYKTDSAPFDANGNYTGGTTNVEQQVDSSRTMVIGH--------- 173 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I K D +AS+ N+ + + N Sbjct: 174 -------TGDKIFDAITSNAVKEPDG--------SASETNVFSMLDSAIAALKTPVANDD 218 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 A K ++ L+ ++ RA +G +++ Sbjct: 219 T-------------------AKAAAAAAIDKTNRGLRNSLNNVLSVRAEVGTQLNELDKL 259 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + + ++ SY + +Q +S+ Sbjct: 260 DALGDDRKLSQTQQMSDLVDVDWNATISNYTMQQAALQASYKTFSDMQGMSL 311 >gi|24374751|ref|NP_718794.1| flagellar hook-associated protein FlgL [Shewanella oneidensis MR-1] gi|24349415|gb|AAN56238.1|AE015761_8 flagellar hook-associated protein FlgL [Shewanella oneidensis MR-1] Length = 403 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 80/191 (41%), Gaps = 11/191 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSS-----DYGLQLGARVTSILEWEQEKN 60 +ST+ +F + + + K+ E++ +G+ D LG Q Sbjct: 3 LSTAQLFNQSITSVLQKQTATSKVLEQLSSGKKVNTSGDDPVAALGID-----NLNQRNA 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + RL+ +++ L S + + + L+ + G +++ + A ++DS Sbjct: 58 LVDQFMKNIDYANNRLAVTESKLGSAEDLTGSIREQLMRAVNGTLSDSERQMIADEMKDS 117 Query: 121 YESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 + ++ AN D G YLFSG ++ ++P + S D ++ L ++ ++ Sbjct: 118 LKELLSLANSKDESGNYLFSGFSTDKQPFAFDNSTPPKIVYSGDSGVRDSLVQSGVAIGT 177 Query: 180 GQHLEVSSMNA 190 + + M A Sbjct: 178 NIPGDQAFMKA 188 >gi|119775443|ref|YP_928183.1| flagellar hook-associated protein FlgL [Shewanella amazonensis SB2B] gi|119767943|gb|ABM00514.1| flagellar hook-associated protein FlgL [Shewanella amazonensis SB2B] Length = 401 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 59/408 (14%), Positives = 137/408 (33%), Gaps = 65/408 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSS-----DYGLQLGARVTSILEWEQEKN 60 ISTS +F + + ++ KL E++ +G+ D LG Q++ Sbjct: 3 ISTSQMFTQNTNNILQKQTETAKLLEQLSSGKKVNTSGDDPVAALGID-----NLNQQQA 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + L + L +++ L S +++V + ++ + G ++ + A +R S Sbjct: 58 LVDQFLKNIDYAKNHLGIAESKLGSAEELVTGLREQILRGVNGGLSPSERQMIADEMRGS 117 Query: 121 YESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 + + AN D G ++FSG + +P F S D ++ + ++ Sbjct: 118 LQELLNVANTRDESGNFMFSGFKTDTEPFA--FDGAGNMVYSGDAGVRDAMISRGIAMGT 175 Query: 180 GQHLEVSSMN-------------AQQMTDF------IKQLEDKFSDDE--YWANNWS--- 215 +++ M + Q DF I D + +N S Sbjct: 176 NVPGDMAFMTSPNALGDYTVNYLSSQAGDFKVQSAAITNPAAHVEDTYTFNFIDNGSGGV 235 Query: 216 --------------------------NASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFV 249 N D ++ + I ++ + I Sbjct: 236 NLEVRDSANGLVTTVNNFDATNPVSFNGIDVKLEGTPAAGDSISLAPQAEVSIFDTINKA 295 Query: 250 AVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKN 309 + + + A ++L+ GL+ + R+V G + K++ + Sbjct: 296 IALIED--DSRMNSPAGIAELAQLLNDTDSGLNQLSTARSVAGNNLKSLESYAGRHAEEQ 353 Query: 310 NIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +S ++ TA + + + +++ +S+ +YL Sbjct: 354 VVNTSALSLLEDLDYATAITEFEKQQLALNAVSNVFSRVGSVSLFDYL 401 >gi|74317645|ref|YP_315385.1| flagellar hook-associated protein FlgL [Thiobacillus denitrificans ATCC 25259] gi|74057140|gb|AAZ97580.1| flagellin, flagellar hook-associated protein 3 FlgL [Thiobacillus denitrificans ATCC 25259] Length = 300 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 73/188 (38%), Gaps = 8/188 (4%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++FE EL D VK +++ TG+ LE Q ++ ++ Sbjct: 3 ISTQTLFEAGAARLSELQSDMVKTQQQISTGRRVLTPADDPVAAARALEVTQSQSMNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ + L+ + +++QD+ +V G + + A LR +E + Sbjct: 63 GVNRDYAKSSLAAVEGSLTGVTELLQDVKTTIVAAGNGTLGDMERGYMATELRGRFEQLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLN-------GYFTKDSLAKKSFDQMLQGFLEENSKSL 177 AN D G YLFSG ++ P + Y D Q + + +++ Sbjct: 123 GMANSRDAQGNYLFSGFQTATPPFSKNAGNAVTYNGDAGQRLMQVDTTRQLAVSHSGQAI 182 Query: 178 LAGQHLEV 185 G +V Sbjct: 183 FQGGGQDV 190 >gi|300938648|ref|ZP_07153377.1| flagellar hook-associated protein 3 [Escherichia coli MS 21-1] gi|300456433|gb|EFK19926.1| flagellar hook-associated protein 3 [Escherichia coli MS 21-1] Length = 317 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 108/348 (31%), Gaps = 40/348 (11%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNSSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN TD G+Y+F+G + P + K +S Q + V Sbjct: 124 LANTTDGNGRYIFAGYKTESAPFSEADGKYEGGAESIKQQVDA------------SRSMV 171 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++ D I D N D I Sbjct: 172 IGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAI----------------------- 208 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 A + T K ++ L+ ++ RA LG + Sbjct: 209 ----AALKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLG 264 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 265 SDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 312 >gi|297544026|ref|YP_003676328.1| flagellar hook-associated protein 3 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841801|gb|ADH60317.1| flagellar hook-associated protein 3 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 297 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 36/125 (28%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 K + TG+ V + L + + V L + L Sbjct: 23 LQKNQNMLSTGKKISRPSDDPVAVATSLRIRTDIARNDAYTKNADEVQSWLDMTDTALGQ 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 + ++Q V G A + + N G+Y+F+G ++ Sbjct: 83 LGDLLQRTRELAVEGANGTLTQADMQKIAEEIEQLKAQMIQVGNTQYNGRYIFAGFKTTT 142 Query: 146 KPLNG 150 +P + Sbjct: 143 QPFSE 147 >gi|16760060|ref|NP_455677.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142169|ref|NP_805511.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213424686|ref|ZP_03357451.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213865496|ref|ZP_03387615.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25299199|pir||AI0640 flagellar hook-associated protein 3 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502354|emb|CAD08308.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Typhi] gi|29137799|gb|AAO69360.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 317 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 113/349 (32%), Gaps = 40/349 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++E+ + +KL E+M TG+ + + Q + ++ Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLFQAQAQNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S ++ LS + +Q +V G ++ A L+ + + Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F+G + P + +KS Q + Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQ------------QVDSARTM 170 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V Q+ + I D N D I Sbjct: 171 VIGHTGAQIFNSITSNAVPEPDGSDSEKNLFVMLDTAI---------------------- 208 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 A + T ++ K ++ L+ ++ RA LG ++ Sbjct: 209 -----AALKTPVEGNDVEKEKAAAAIDKTNRGLKNSLNNVLTVRAELGTQLSELSTLDSL 263 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ ++ + ++ SY T +Q +S+ Sbjct: 264 GSDRALGQKLQMSNLVDVDWNSVISSYVMQQAALQASYKTFTDMQGMSL 312 >gi|226944499|ref|YP_002799572.1| flagellar hook-associated protein FlgL [Azotobacter vinelandii DJ] gi|226719426|gb|ACO78597.1| flagellar hook-associated protein [Azotobacter vinelandii DJ] Length = 401 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 54/399 (13%), Positives = 121/399 (30%), Gaps = 47/399 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++FE+ + +K+ +++ +G+ + + Q + + Sbjct: 3 ISTVTMFEQGLSSLVRQQSEYLKVGQQIASGKRVVNPSDDPQAASRAISVSQSQAVNQQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS ++ L+S+ + LV G + A ++ YES + Sbjct: 63 DDARVSTRNALSQEESVLNSIADAIASAKTRLVQAGNGTLSDADRSSLASEIKGIYESLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAK--------KSFDQMLQGFLEENSKS 176 AN TD G+YLF G S P T ++A + D Q +N K Sbjct: 123 GQANATDGSGRYLFGGYQDSSPPFVKDNTSGAVAYQGDEGLILQQVDASRQMPSSDNGKQ 182 Query: 177 LLAGQHLEVSSMNAQQMTDFIKQLEDKFSD--------DEYWANNWSNASDHNIKYRIKD 228 + H + + + +++ A+D ++ Y Sbjct: 183 IFQSVHGSAGYLAQADAGNAGTVTFTGPYVSDSTAAGFGSGFTLDFAVATDGSVTYSSDG 242 Query: 229 TEG------------------------------IDVSANVNMRGIRDIMFVAVIGTEFLS 258 ++ + N + R + + + Sbjct: 243 GTTQVPYADGQSIEINGLSLTLEGTPADGDSIVVEKAQNADPDLFRTLENMIAALDTPVE 302 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 + + L ++ RA +G ++ N+ +S Sbjct: 303 TDADLARLQNTLSTSSRELDNALDSVLTVRASVGARLNELDVLDAVGDNRALNYKQTLSD 362 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I ++ + A ++ S ++ + + LS+ + L Sbjct: 363 LIDLDYNEAISEYSLRQVGLQAAQKAFVDISSLSLFDLL 401 >gi|237752753|ref|ZP_04583233.1| flagellar hook-associated protein FlgL [Helicobacter winghamensis ATCC BAA-430] gi|229376242|gb|EEO26333.1| flagellar hook-associated protein FlgL [Helicobacter winghamensis ATCC BAA-430] Length = 876 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 53/150 (35%), Gaps = 8/150 (5%) Query: 61 HIAERLHSNSLVTKRLSTSQ---AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 +I S L L+ ++ LS + K + + LV + A L Sbjct: 54 NINTLTQSKELANNALTFTKHTDTALSELAKSMDNFKTKLVQGANDIHNETSRLAIAKDL 113 Query: 118 RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSL 177 R + F++ AN + G+Y+F G +++ P N S S +L L N+ Sbjct: 114 RAIRDHFLSIANTSIGGEYIFGGTATTKSPFN---ADGSYNGNS--DVLSALLGSNNSLP 168 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSDD 207 E+ + + I KF+ Sbjct: 169 YNITGSELFFGSDRDTNRVISTNVPKFNQS 198 Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 67/215 (31%), Gaps = 20/215 (9%) Query: 154 KDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSM--NAQQMTDFIKQLEDKFSDDEYWA 211 D K +++ ML + +L L++ + +M FS + + Sbjct: 671 NDPANKSAYEAMLGNAKHNVNITLDVNGALQIKDLHRTPTRME---------FSLYDSTS 721 Query: 212 NNWS-NASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF--------LSKNLT 262 +N++ NA R T + + + I + + + Sbjct: 722 DNYTLNAQGRIDGSRPALTFQANSAVVADDPHINFFQQIDQMIEALEVGSYRPGGTNTYG 781 Query: 263 DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGV 322 D RN + + + + G + T S +I Sbjct: 782 DAMRNPGVQNAILAFDHLADHVNKVHTKNGSQGNAFEYSIERTEVLIVQAKTLRSDTIDT 841 Query: 323 EQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + A+ Q STL + +K+ +LS++NYL Sbjct: 842 DFAEAYLQFSTLSMGYQAMLSSVSKITQLSLVNYL 876 >gi|21242720|ref|NP_642302.1| flagellar hook-associated protein FlgL [Xanthomonas axonopodis pv. citri str. 306] gi|21108195|gb|AAM36838.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306] Length = 401 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 62/398 (15%), Positives = 118/398 (29%), Gaps = 44/398 (11%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ISTS ++ + +L ++ +GQ + + ++ Sbjct: 1 MTDRISTSMMYSQSVASMGAKQSRLNQLESQLSSGQRLVTAKDDPVAAGTAVGLDRALAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + V RL + LS + + V + A L Sbjct: 61 ITRFGENANNVQNRLGLQENALSQAGDKMARVTELAVQASNSSLSPDDRKAIASELTALR 120 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPL----NGYFTKDSLAKKSFDQMLQGFLEENSKS 176 ES V+ AN TD G+YLF G P +K + F+ + Sbjct: 121 ESMVSLANSTDGTGRYLFGGTADGSAPFIKSNGSVTYNGDQTQKQVEVAPDTFVSDTLPG 180 Query: 177 LL------AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSN----ASDH------ 220 G + NA + + + W + A+D Sbjct: 181 SEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDASTGSWNGGSYSVQFTAADTYEVRDS 240 Query: 221 -------------------NIKYRIKDTEGIDVSANVNMRGIRDIMFVA-VIGTEFLSKN 260 ++ RI + S + G +D+ + S Sbjct: 241 TNTVVGTGTYKEGEDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDDLVGALNSDT 300 Query: 261 LTDGARNVLTKK---MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 LT + + + + Q S +I+ RA G I+ L++ + T +S Sbjct: 301 LTAPQKAAMINTLQSSMRDITQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTSLS 360 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ +A Q ++ + I ++Q S+ N Sbjct: 361 SIRDLDYASAIGQYQLEKASLQAAQTILQQMQSSSLFN 398 >gi|146341928|ref|YP_001206976.1| putative flagellin and related hook-associated protein [Bradyrhizobium sp. ORS278] gi|146194734|emb|CAL78759.1| Conserved hypothetical protein; putative Flagellin and related hook-associated protein [Bradyrhizobium sp. ORS278] Length = 623 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 87/270 (32%), Gaps = 12/270 (4%) Query: 93 MVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYF 152 V + + IN + S + + T + + G + F Sbjct: 361 TVNGQTLSFVTSGASGNTQINITDSVQTLLSKIDALSGTSKASTVSGGAITLRTDNAASF 420 Query: 153 TKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN 212 + S +F GF + + +A + + ++ + Sbjct: 421 SISSSNAGAF--AALGFSGTVTAPTPPLRVSGTPLGSATTLVNGSTNTISWYTGNSGPGT 478 Query: 213 NWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARN---VL 269 ++AS RI + I A N IR+++ + + A L Sbjct: 479 ARASAS-----IRIDTAQSIQFGAQANEFAIRNLVQQTAVYAAVNTPPTGANAGQQIGAL 533 Query: 270 TKKMLSTVQQ--GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 ++++ + G I + + ++ + + + + + ++ G+ Q Sbjct: 534 SERIAYNLTSQLGQQSISDIQTDFANAQTTMKDATARQTQAKAAMQSLVDQTEGISQQEV 593 Query: 328 HAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +Q+ L ++ SY T L +LS++ YL Sbjct: 594 ASQILQLQTNLQASYQTTAMLAQLSLVKYL 623 Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 55/180 (30%), Gaps = 3/180 (1%) Query: 12 FERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSL 71 + + + ++ L ++ +G + +G + + ++I+ + + Sbjct: 10 TSLLGLSVRNISNQLADLSTQLSSGNKASNYAGMGPDEGFAIAARAQLSNISAFTLTMTH 69 Query: 72 VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT 131 V + L S+ KI + + T + + + V N Sbjct: 70 VNTVIGAMNTSLQSLSKIGDQVQSGASATPQNLTSTGQ-TTGQQTASSNLSAIVGILNTQ 128 Query: 132 DEGQYLFSGINSSEKPL--NGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN 189 +++FSG + + + + Q++ + + G+ +S Sbjct: 129 VGDRFIFSGSATDRPAIASADEILNGTATQAGLKQVIAERRQADLGLNGLGRLNLSASAT 188 >gi|82702460|ref|YP_412026.1| flagellar hook-associated protein FlgL [Nitrosospira multiformis ATCC 25196] gi|82410525|gb|ABB74634.1| Flagellin-like protein [Nitrosospira multiformis ATCC 25196] Length = 311 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 117/356 (32%), Gaps = 52/356 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAE- 64 +S+++ +E +K E++ TG+S A L+ E + Sbjct: 3 VSSNTSYEAGLAAIHRQQSAQMKTFEQISTGRSVLTPSANPAAYVRALDV-AEADSANSQ 61 Query: 65 --RLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 N + + LS + L + ++Q V G +++ A LR S Sbjct: 62 YALNRQNGMAS--LSMLEDTLGGITALLQRAQELTVAAGNGTLNDSGRETIATELRTSLG 119 Query: 123 SFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 + +N D GQYLFSG SS KP S + D+ L+ +S+ L Sbjct: 120 ELLGLSNRKDASGQYLFSGYQSSTKPFED---TGSGVQYVGDEGLRMIQASSSRQLAV-- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 N S + RI G S Sbjct: 175 ----------------------------------NESGREVFERIPAAGGSYHSM----- 195 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 + + +A + ++ A + L +++ +A +G K I+ Sbjct: 196 -FKTLSDLADLLETPVTDPAGKTALATGLGSAQVNLSNALDNVLKVQASVGTRMKEIDAL 254 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ N +S+ V+ A + L+ +E + K+Q LS+ +Y+ Sbjct: 255 NERGEDLNIQYKQQLSELRDVDYVEAISDLTQQRTYLEATQKAFLKVQSLSLFDYI 310 >gi|310659649|ref|YP_003937370.1| flagellin and related hook-associated proteins [Clostridium sticklandii DSM 519] gi|308826427|emb|CBH22465.1| Flagellin and related hook-associated proteins [Clostridium sticklandii] Length = 304 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 97/311 (31%), Gaps = 53/311 (17%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 RV L E + N E + L ++ ++ + + Q + V G Sbjct: 45 RVARTLRLESDINMSLEYKENIQAAKSWLEKTETAMNEITSVYQRIRELGVQGANGILKE 104 Query: 108 NKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ 167 A +++ + N T G+ +F+G + K L+ S + D ++ Sbjct: 105 EDTQKVAQEIKELKNHLIQVGNDTYMGRQIFTGFKTDIKLLDS-----SGNYNTADGLVL 159 Query: 168 GFLEENSKSLLAGQHLEVS-SMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRI 226 L G ++S ++ ++ + + K DD Sbjct: 160 ATLPSELIEYKVGDSQQISVNITGDRIYGPLVGGKPKLFDDID----------------- 202 Query: 227 KDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIE 286 + T + N D L+ + L +++ Sbjct: 203 ------------------------KLLTALGTANHEDA------SASLADMDNQLKTLLQ 232 Query: 287 QRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITT 346 R +G I+ + + + + +SK+ + QL T + S +T Sbjct: 233 VRGEVGAKVNMIDIMSERMTDVSINLKELLSKTKDTDVAETQIQLITAEAVYKASLSVTA 292 Query: 347 KLQKLSILNYL 357 ++ + +++++L Sbjct: 293 RIIQPTLVDFL 303 >gi|294665572|ref|ZP_06730853.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604670|gb|EFF48040.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 401 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 62/398 (15%), Positives = 118/398 (29%), Gaps = 44/398 (11%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ISTS ++ + +L ++ +GQ + + ++ Sbjct: 1 MTDRISTSMMYSQSVASMGAKQSRLNQLESQLSSGQRLVTAKDDPVAAGTAVGLDRALAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + V RL + LS + + V + A L Sbjct: 61 ITRFGENANNVQNRLGLQENALSQAGDKMARVTELAVQASNSSLSPDDRKAIASELTALR 120 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPL----NGYFTKDSLAKKSFDQMLQGFLEENSKS 176 ES V+ AN TD G+YLF G P +K + F+ + Sbjct: 121 ESMVSLANSTDGTGRYLFGGTADGSAPFIKSNGSVTYNGDQTQKQVEVAPDTFVSDTLPG 180 Query: 177 LL------AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSN----ASDH------ 220 G + NA + + + W + A+D Sbjct: 181 SEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDASTGSWNGGSYSVQFTAADTYEVRDS 240 Query: 221 -------------------NIKYRIKDTEGIDVSANVNMRGIRDIMFVA-VIGTEFLSKN 260 ++ RI + S + G +D+ + S Sbjct: 241 TNTVVGTGTYKEGEDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDDLVGALNSDT 300 Query: 261 LTDGARNVLTKK---MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 LT + + + + Q S +I+ RA G I+ L++ + T +S Sbjct: 301 LTAPQKAAMINTLQSSMRDITQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTSLS 360 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ +A Q ++ + I ++Q S+ N Sbjct: 361 SIRDLDYASAIGQYQLEKASLQAAQTIFQQMQSSSLFN 398 >gi|78047579|ref|YP_363754.1| flagellar hook-associated protein FlgL [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325927968|ref|ZP_08189189.1| flagellar hook-associated protein 3 [Xanthomonas perforans 91-118] gi|78036009|emb|CAJ23700.1| flagellin and related hook-associated proteins [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325541653|gb|EGD13174.1| flagellar hook-associated protein 3 [Xanthomonas perforans 91-118] Length = 401 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 62/398 (15%), Positives = 118/398 (29%), Gaps = 44/398 (11%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ISTS ++ + +L ++ +GQ + + ++ Sbjct: 1 MTDRISTSMMYSQSVASMGAKQSRLNQLESQLSSGQRLVTAKDDPVAAGTAVGLDRALAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + V RL + LS + + V + A L Sbjct: 61 ITRFGENANNVQNRLGLQENALSQAGDKMARVTELAVQASNSSLSPDDRKAIASELTALR 120 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPL----NGYFTKDSLAKKSFDQMLQGFLEENSKS 176 ES V+ AN TD G+YLF G P +K + F+ + Sbjct: 121 ESMVSLANSTDGTGRYLFGGTADGSAPFIKSNGSVTYNGDQTQKQVEVAPDTFVSDALPG 180 Query: 177 LL------AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSN----ASDH------ 220 G + NA + + + W + A+D Sbjct: 181 SEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDASTGSWNGGSYSVQFTAADTYEVRDS 240 Query: 221 -------------------NIKYRIKDTEGIDVSANVNMRGIRDIMFVA-VIGTEFLSKN 260 ++ RI + S + G +D+ + S Sbjct: 241 TNTVVGTGTYKEGEDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIGDLVGALNSDT 300 Query: 261 LTDGARNVLTKK---MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 LT + + + + Q S +I+ RA G I+ L++ + T +S Sbjct: 301 LTAPQKTAMINTLQSSMRDITQASSKMIDARASGGAQLSAIDNANALLESNEVTLKTSLS 360 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ +A Q ++ + I ++Q S+ N Sbjct: 361 SIRDLDYASAIGQYQLEKASLQAAQTIFQQMQSSSLFN 398 >gi|168237267|ref|ZP_02662325.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736765|ref|YP_002114183.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712267|gb|ACF91488.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197289761|gb|EDY29122.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 317 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 113/349 (32%), Gaps = 40/349 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++E+ + +KL E+M TG+ + + Q + ++ Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLSQAQAQNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S ++ LS + +Q +V G ++ A L+ + + Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F+G + P + +KS Q + Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQ------------QVDSARTM 170 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V Q+ + I D N D I Sbjct: 171 VIGHTGAQIFNSITSNAVPEPDGSDSEKNLFVMLDTAI---------------------- 208 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 A + T ++ K ++ L+ ++ RA LG ++ Sbjct: 209 -----AALKTPVEGNDVEKEKAAAAIDKTNRGLKNSLNNVLTVRAELGTQLSELSTLDSL 263 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ ++ + ++ SY T +Q +S+ Sbjct: 264 GSDRALEQKLQMSNLVDVDWNSVISSYVMQQAALQASYKTFTDMQGMSL 312 >gi|294624308|ref|ZP_06703011.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601390|gb|EFF45424.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 401 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 62/398 (15%), Positives = 118/398 (29%), Gaps = 44/398 (11%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ISTS ++ + +L ++ +GQ + + ++ Sbjct: 1 MTDRISTSMMYSQSVASMGAKQSRLNQLESQLSSGQRLVTAKDDPVAAGTAVGLDRALAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + V RL + LS + + V + A L Sbjct: 61 ITRFGENANNVQNRLGLQENALSQAGDKMARVTELAVQASNSSLSPDDRKAIASELTALR 120 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPL----NGYFTKDSLAKKSFDQMLQGFLEENSKS 176 ES V+ AN TD G+YLF G P +K + F+ + Sbjct: 121 ESMVSLANSTDGTGRYLFGGTADGNAPFIKSNGSVTYNGDQTQKQVEVAPDTFVSDTLPG 180 Query: 177 LL------AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSN----ASDH------ 220 G + NA + + + W + A+D Sbjct: 181 SEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDASTGSWNGGSYSVQFTAADTYEVRDS 240 Query: 221 -------------------NIKYRIKDTEGIDVSANVNMRGIRDIMFVA-VIGTEFLSKN 260 ++ RI + S + G +D+ + S Sbjct: 241 TNTVVGTGTYKEGEDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDDLVGALNSDT 300 Query: 261 LTDGARNVLTKK---MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 LT + + + + Q S +I+ RA G I+ L++ + T +S Sbjct: 301 LTAPQKAAMINTLQSSMRDITQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTSLS 360 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ +A Q ++ + I ++Q S+ N Sbjct: 361 SIRDLDYASAIGQYQLEKASLQAAQTIFQQMQSSSLFN 398 >gi|166712055|ref|ZP_02243262.1| flagellar hook-associated protein FlgL [Xanthomonas oryzae pv. oryzicola BLS256] Length = 401 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 118/398 (29%), Gaps = 44/398 (11%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ISTS ++ + ++ ++ +GQ + + ++ Sbjct: 1 MTDRISTSMMYSQSVASMGAKQARLNQIEAQLASGQRLVTAKDDPVAAGTAVGLDRALAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + V RL + LS + + V + A L Sbjct: 61 ITRFGENANNVQNRLGLQENALSQAGDKMARVTELAVQANNSSLSPDDRKAIAAELTALR 120 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPL----NGYFTKDSLAKKSFDQMLQGFLEENSKS 176 +S V+ AN TD G+YLF G P +K + F+ + Sbjct: 121 DSMVSLANSTDGTGRYLFGGTADGSAPFIKSSGNVTYNGDQTQKQVEVAPDTFVSDTLPG 180 Query: 177 LLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWS-NASDHNIKYRIKDTEGIDVS 235 + + D + S N + +++++ +T + S Sbjct: 181 SEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDTSTGSWNGASYSVQFTAANTYEVRDS 240 Query: 236 ANV-------------NMRGIRDIMFVAV----------------------IGTEFLSKN 260 N N G+R + A + S Sbjct: 241 TNAVVSTGTYKEGQDINAAGVRMRISGAPAVGDSFQIGASGSKDVFSTIDDMVGALNSDT 300 Query: 261 LTDGARNVLTKK---MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 LT + + + + Q S +I+ RA G I+ L++ + T +S Sbjct: 301 LTAPQKASMINTLQSSMRDIAQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLS 360 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ +A Q ++ + I ++Q S+ N Sbjct: 361 SIRDLDYASAIGQYQLEKASLQAAQTIFQQMQSSSLFN 398 >gi|205353080|ref|YP_002226881.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272861|emb|CAR37788.1| flagellar hook-associated protein 3 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628159|gb|EGE34502.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 317 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 113/349 (32%), Gaps = 40/349 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++E+ + +KL E+M TG+ + + Q + ++ Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLSQAQAQNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S ++ LS + +Q +V G ++ A L+ + + Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F+G + P + +KS Q + Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQ------------QVDSARTM 170 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V Q+ + I D N D I Sbjct: 171 VIGHTGVQIFNSITSNAVPEPDGSDSEKNLFVMLDTAI---------------------- 208 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 A + T ++ K ++ L+ ++ RA LG ++ Sbjct: 209 -----AALKTPVEGNDVEKEKAAAAIDKTNRGLKNSLNNVLTVRAELGTQLSELSTLDSL 263 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ ++ + ++ SY T +Q +S+ Sbjct: 264 GSDRALGQKLQMSNLVDVDWNSVISSYVMQQAALQASYKTFTDMQGMSL 312 >gi|46906957|ref|YP_013346.1| flagellar hook-associated protein FlgL [Listeria monocytogenes serotype 4b str. F2365] gi|226223337|ref|YP_002757444.1| flagellar hook-associated protein 3 FlgL [Listeria monocytogenes Clip81459] gi|254932014|ref|ZP_05265373.1| flagellar hook-associated protein FlgL [Listeria monocytogenes HPB2262] gi|290894003|ref|ZP_06556978.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL J2-071] gi|46880223|gb|AAT03523.1| putative flagellar hook-associated protein FlgL [Listeria monocytogenes serotype 4b str. F2365] gi|225875799|emb|CAS04502.1| Putative flagellar hook-associated protein 3 FlgL [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|290556449|gb|EFD89988.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL J2-071] gi|293583566|gb|EFF95598.1| flagellar hook-associated protein FlgL [Listeria monocytogenes HPB2262] gi|332311131|gb|EGJ24226.1| Flagellar hook-associated protein 3 [Listeria monocytogenes str. Scott A] Length = 291 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 64/150 (42%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ + ++ + K ++ +G+ + + IL + + + Sbjct: 3 ISTNQQANSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+T++ LSSM + + ++ + G +D + +A ++ + + Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKDNMSQSAEEIKGLLDVLI 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKD 155 + AN D+G+Y+FSG ++S KP T Sbjct: 123 SVANSEDDGRYVFSGSSTSVKPFTTDKTTG 152 Score = 36.2 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 7/160 (4%) Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 F+ D+ N + N K+R+ T+ ++V + + D+ + + Sbjct: 139 STSVKPFTTDKTTGEIIYNGTTENKKFRV--TDTLEVEVFHDGSAMTDVFNNIQKIVDAM 196 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 A + L T + + I +G + + L +K S Sbjct: 197 KTG-DKDALSAL----QETNSKNIEIITNSMTNIGGQKNGVAAYDNVLSSKIVDFSERKS 251 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V A + L+ + + + +QKLSILNY+ Sbjct: 252 NVEEVNMPEAVSNLNKTSIAYQAALQSSVMVQKLSILNYM 291 >gi|313610101|gb|EFR85426.1| flagellar hook-associated protein 3 [Listeria monocytogenes FSL F2-208] Length = 291 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 64/150 (42%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ + ++ + K ++ +G+ + + IL + + + Sbjct: 3 ISTNQQANSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+T++ LSSM + + ++ + G +D + +A ++ + + Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKDNMSQSAEEIKGLLDVLI 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKD 155 + AN D+G+Y+FSG ++S KP T Sbjct: 123 SVANSEDDGRYVFSGSSTSVKPFTTDKTTG 152 >gi|16799789|ref|NP_470057.1| flagellar hook-associated protein FlgL [Listeria innocua Clip11262] gi|16413166|emb|CAC95946.1| lin0714 [Listeria innocua Clip11262] gi|313620049|gb|EFR91564.1| flagellar hook-associated protein 3 [Listeria innocua FSL S4-378] gi|313624690|gb|EFR94647.1| flagellar hook-associated protein 3 [Listeria innocua FSL J1-023] Length = 291 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 64/150 (42%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ + ++ + K ++ +G+ + + IL + + + Sbjct: 3 ISTNQQANSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+T++ LSSM + + ++ + G +D + +A ++ + + Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKDNMSQSAEEIKGLLDVLI 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKD 155 + AN D+G+Y+FSG ++S KP T Sbjct: 123 SVANSEDDGRYVFSGSSTSVKPFTTDKTTG 152 Score = 37.4 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 7/160 (4%) Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 F+ D+ N + N K+R+ T+ ++V + + D+ + + Sbjct: 139 STSVKPFTTDKTTGEIIYNGTTENKKFRV--TDTLEVEVFHDGSAMTDVFNNIQKIVDAM 196 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 A + L T + + I +G + + L +K S Sbjct: 197 KSG-DKDALSAL----QETNSKNIEIITNSMTNIGGQKNGVTAYDNVLSSKIVDFSERKS 251 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V A + L+ + + + +QKLSILNY+ Sbjct: 252 NVEEVNMPEAVSNLNKTSIAYQAALQSSVMVQKLSILNYM 291 >gi|47091668|ref|ZP_00229464.1| flagellar hook-associated protein FlgL, putative [Listeria monocytogenes str. 4b H7858] gi|217965196|ref|YP_002350874.1| flagellar hook-associated protein 3 [Listeria monocytogenes HCC23] gi|254824014|ref|ZP_05229015.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL J1-194] gi|254853090|ref|ZP_05242438.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL R2-503] gi|255521216|ref|ZP_05388453.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL J1-175] gi|300764518|ref|ZP_07074511.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL N1-017] gi|47019987|gb|EAL10724.1| flagellar hook-associated protein FlgL, putative [Listeria monocytogenes str. 4b H7858] gi|217334466|gb|ACK40260.1| flagellar hook-associated protein 3 [Listeria monocytogenes HCC23] gi|258606439|gb|EEW19047.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL R2-503] gi|293593242|gb|EFG01003.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL J1-194] gi|300514872|gb|EFK41926.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL N1-017] gi|307570245|emb|CAR83424.1| flagellar hook-associated protein 3 [Listeria monocytogenes L99] gi|328467271|gb|EGF38351.1| flagellar hook-associated protein FlgL [Listeria monocytogenes 1816] Length = 291 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 64/150 (42%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ + ++ + K ++ +G+ + + IL + + + Sbjct: 3 ISTNQQANSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+T++ LSSM + + ++ + G +D + +A ++ + + Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKDNMSQSAEEIKGLLDVLI 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKD 155 + AN D+G+Y+FSG ++S KP T Sbjct: 123 SVANSEDDGRYVFSGSSTSVKPFTTDKTTG 152 Score = 37.0 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 7/160 (4%) Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 F+ D+ N + N K+R+ T+ ++V + + D+ + + Sbjct: 139 STSVKPFTTDKTTGEIIYNGTTENKKFRV--TDTLEVEVFHDGSAMTDVFNNIQKIVDAM 196 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 A + L T + + I +G + + L +K S Sbjct: 197 KTG-DKDALSAL----QETNSKNIEIITNSMTNIGGQKNGVTAYDNVLSSKIVDFSERKS 251 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V A + L+ + + + +QKLSILNY+ Sbjct: 252 NVEEVNMPEAVSNLNKTSIAYQAALQSSVMVQKLSILNYM 291 >gi|284041492|ref|YP_003391832.1| flagellar hook-associated protein 3 [Conexibacter woesei DSM 14684] gi|283945713|gb|ADB48457.1| flagellar hook-associated protein 3 [Conexibacter woesei DSM 14684] Length = 301 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 104/355 (29%), Gaps = 67/355 (18%) Query: 10 SIFERMNILTKELN---KDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 + ++L +L +M +G+ L E + + Sbjct: 6 TAQMTARTTVRDLQGDLAQLSQLQRKMSSGKEITKPSDDPYGTGRALGLHGEVAGLQQYQ 65 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + T L+ S L + + + L+ + A + E+ Sbjct: 66 KNVDDGTAWLNASDTALGKIGDAINRVRELLIRVGTDSAGQAARDAAASEVDQLIETIKQ 125 Query: 127 FANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS 186 AN+ G+Y+F+G + +P Y G + + + G L+V+ Sbjct: 126 EANIQYAGRYVFAGTATDRQP---YQLLGP-------DTFNGNTDRIQREIGPGVELDVN 175 Query: 187 SMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI 246 + I L N A D+ + +RDI Sbjct: 176 TD--------ISGLFG----------NGQAAGDNRLL-----------------DTLRDI 200 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 N+ G + L ++ + + + RA +G + L Sbjct: 201 A-----------DNMRAGRGDDLRGTDIARLDANVDVLNGIRADVGARTNRMEIADGRL- 248 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTK----LQKLSILNYL 357 +++ + I VE L + + +Y + + + + S++++L Sbjct: 249 --SSLEENSIELLSKVEDADTVKTLIEYTTQ-QAAYNMALRAGSNVVQNSLMDFL 300 >gi|121535556|ref|ZP_01667364.1| flagellar hook-associated protein 3 [Thermosinus carboxydivorans Nor1] gi|121305884|gb|EAX46818.1| flagellar hook-associated protein 3 [Thermosinus carboxydivorans Nor1] Length = 323 Score = 57.4 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 108/355 (30%), Gaps = 36/355 (10%) Query: 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHI 62 T I + + +N + + E++ G++ + L + Sbjct: 4 TNNIISYNFLNSLNKALER-QNEI---QEQLADGKAIHRPSDDPIKTIRSLRFNTNLAMN 59 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + + L T+ LS + IV L I G F A + + Sbjct: 60 EQFTQNVKDALSWLETTDGALSDLSSIVIRA-KELTIEAVGPNPTEAFAAIAQEINGLID 118 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 V AN +Y+F+G P + + + Sbjct: 119 HAVQVANTKIGDRYIFAGQKDKTTPFERRMVDPDPSVTGDEFEAVVYSG----------- 167 Query: 183 LEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG 242 +NA M ++ + + + N + A + ++ + I ++ + Sbjct: 168 ----DINAISM-----RIYPGAINPQQDSVNVTGADVFGLTSVKENGQTIYIA-----KA 213 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 ++ I E N L+ + ++ + + + I+ + +G + Sbjct: 214 FDQLLK---IKAELEKPNPD---VQWLSNQGMAWIDEIHTRILNAQTKIGTRMSMYEMAQ 267 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L+ N I IS + ++ A T N + + ++ S++++L Sbjct: 268 NMLEQDNTTITGDISANEDLDMPKAIIDFKTSENVYRSALAVGARIMPASLVDFL 322 >gi|2443634|gb|AAC33159.1| hook associated protein [Vibrio cholerae] Length = 397 Score = 57.4 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 54/407 (13%), Positives = 127/407 (31%), Gaps = 69/407 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + + ++ +G+ SD L I Q++ Sbjct: 5 ISSFHNYQAVQNDIRRQESEVFNNQAQLASGKKLLSASDNPLA----THYIQNVGQQEEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + L + LV RL + +S+ ++ ++ ++ G A +L++ Sbjct: 61 LRQYLDAIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMA 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL------------NGYF--------------TK 154 +F+ AN+ D G Y+F+G +P + Y Sbjct: 121 NNFINLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYAGDDYQRKMKISNSLEIPFNNP 180 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS-----SMNAQQMTDFIKQLEDKFSDDEY 209 S + + + LE + A F+ E K + Sbjct: 181 GSKVFMEIPNPFGSYEPNYALQEGSELLLERAVNLNPDDTASYRVTFVDMPEGK--NGYQ 238 Query: 210 WANNWSNAS---------------DHNIKYRIKDTEGID----VSANVNMRGIRDIMFVA 250 N S + +K +I + I+ + +V RD + A Sbjct: 239 LERNGSVVQAGEFDAKTGIQFEELNIQVKGQISKGDAIELTPRTTFSVFDT-FRDAIRYA 297 Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 +++D + +++ + + R +G ++ + ++ Sbjct: 298 -------EGSVSDASNTAKLHQLVEEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKI 350 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + S ++ A + + +E S K + L++ NY+ Sbjct: 351 SLAKSKSTFEDLDYAEAVIEFNENSRALEASQKAFGKTKDLTLFNYI 397 >gi|297580836|ref|ZP_06942761.1| flagellar hook-associated protein FlgL [Vibrio cholerae RC385] gi|297534662|gb|EFH73498.1| flagellar hook-associated protein FlgL [Vibrio cholerae RC385] Length = 397 Score = 57.4 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 55/407 (13%), Positives = 126/407 (30%), Gaps = 69/407 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G+ SD L I Q++ Sbjct: 5 ISSFHNYQAVQNDIRRQESKVFNNQAQLASGKKLLSASDNPLA----THYIQNVGQQEEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + L + LV RL + +S+ ++ ++ ++ G A +L++ Sbjct: 61 LRQYLDAIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMA 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL------------NGYF--------------TK 154 +F+ AN+ D G Y+F+G +P + Y Sbjct: 121 NNFINLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYAGDDYQRKMKISNSLEIPFNNP 180 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLE-----VSSMNAQQMTDFIKQLEDKFSDDEY 209 S + + + LE S A F+ E K + Sbjct: 181 GSKVFMEIPNPFGSYEPNYALQEGSELLLERAVNLNSDDTASYRVTFVDMPEGK--NGYQ 238 Query: 210 WANNWSNAS---------------DHNIKYRIKDTEGID----VSANVNMRGIRDIMFVA 250 N S + +K +I + I+ + +V RD + A Sbjct: 239 LERNGSVVQAGEFDAKTGIQFEELNIQVKGQISKGDTIELTPRTTFSVFDT-FRDAIRYA 297 Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 +++D + +++ + + R +G ++ + ++ Sbjct: 298 -------EGSVSDASNTAKLHQLVEEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKI 350 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + S ++ A + + +E S K + L++ NY+ Sbjct: 351 SLAKSKSTFEDLDYAEAVIEFNENSRALEASQKAFGKTKDLTLFNYI 397 >gi|323706356|ref|ZP_08117921.1| flagellar hook-associated protein 3 [Thermoanaerobacterium xylanolyticum LX-11] gi|323534318|gb|EGB24104.1| flagellar hook-associated protein 3 [Thermoanaerobacterium xylanolyticum LX-11] Length = 296 Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 93/337 (27%), Gaps = 59/337 (17%) Query: 21 ELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQ 80 + + K + TG+ V SIL + E + LS + Sbjct: 18 KNLERLQKDQNMLSTGEKVSKPSDDPVAVASILRIKTEIARNNAYTKNTDDAKSWLSLTD 77 Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSG 140 L + ++Q+ V G + A + + + N G+Y+F+G Sbjct: 78 TALGQIGDMLQNARELAVQGSNGTLTQSDMQSIAAQVDQLKQQIIQVGNTQYNGRYIFAG 137 Query: 141 INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQL 200 + KP + + + D F + AG + ++ ++ D Sbjct: 138 YKTDTKPFSD-----TSNGYAGDDGAIKF------EIGAGGNTIQVNVTGDKVFDVSSGT 186 Query: 201 EDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKN 260 + + +N + + + I D Sbjct: 187 SQLLTVMDNLSNALKSGDNQAVSNIIGD-------------------------------- 214 Query: 261 LTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 + L I+ RA G I+ L + N + +SK+ Sbjct: 215 ----------------IDNQLQNILSIRADAGAKANRIDLTANRLSDDNYNFTSLLSKNQ 258 Query: 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + L N S + + S++++L Sbjct: 259 DADIAQVITNLKMDDNVYRASLASGAMIIQPSLVDFL 295 >gi|312109476|ref|YP_003987792.1| flagellar hook-associated protein 3 [Geobacillus sp. Y4.1MC1] gi|311214577|gb|ADP73181.1| flagellar hook-associated protein 3 [Geobacillus sp. Y4.1MC1] Length = 298 Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 37/352 (10%), Positives = 103/352 (29%), Gaps = 57/352 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ + M + K E++VTG+ + + ++ + + Sbjct: 3 VTQFMLANNMLRNLSNSYERLGKYQEQLVTGKKISRPSDDPVVAMKGIAYREDLARVKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + V + ++ L + +Q + +V A + + V Sbjct: 63 QRNIGEVHNWIDSADDALDKVGLALQRVQELVVQASTDTATPEDRKKIADEIDQIQKHIV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN G+Y+F+G ++ GY + + E + +++ Sbjct: 123 DVANTKVGGKYIFNGADTKNPLFIGYPDGMGGLGLNPNANTSDVEIEVFDGIKLDVNIDG 182 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 ++ + + + L+ +D N++ + I + E Sbjct: 183 KTLFTG-IIEMLDNLKTVLNDP--------NSTGNTISSHLSQVE--------------- 218 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 A+ ++ R+ LG + + L Sbjct: 219 -------------------AQQ--------------DALLAARSELGAKQNRVEMMENRL 245 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + I +S + +E L T + + + ++ + +++++L Sbjct: 246 STQEVIATKLMSNNEDIEYEKTITDLITQESVHRAALSVGARIIQPTLVDFL 297 >gi|289577713|ref|YP_003476340.1| flagellar hook-associated protein 3 [Thermoanaerobacter italicus Ab9] gi|289527426|gb|ADD01778.1| flagellar hook-associated protein 3 [Thermoanaerobacter italicus Ab9] Length = 297 Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 37/125 (29%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 K + TG+ V + L + + V L+ + L Sbjct: 23 LQKNQNMLSTGKKISRPSDDPVAVATSLRIRTDMARNDAYTKNADEVQSWLNITDTALDQ 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 + ++Q V G A + + N G+Y+F+G ++ Sbjct: 83 LGDLLQRTRELAVEGANGTLTQADMQKIAKEIEQLKAQMIQVGNTQYNGRYIFAGFKTTT 142 Query: 146 KPLNG 150 +P + Sbjct: 143 QPFSE 147 >gi|315649833|ref|ZP_07902916.1| flagellar hook-associated protein 3 [Paenibacillus vortex V453] gi|315274807|gb|EFU38188.1| flagellar hook-associated protein 3 [Paenibacillus vortex V453] Length = 286 Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 102/333 (30%), Gaps = 60/333 (18%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 K E+M+T + + V + L++ + + + L ++ Sbjct: 12 LDKYQEQMMTQRRINRPSDDPVGVAAALQYRGQITATTQFEQNAEDADSWLKYGDTVMTE 71 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 + +I+Q + V + A + Y+ V+ N +G+Y+F+G + E Sbjct: 72 VTQIIQKLSELAVQGGTDTVPADARENIAAEVEQLYQQLVSLGNSQFKGKYIFNGERTDE 131 Query: 146 KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFS 205 KP T+ + A + + Q G + VS + + F Sbjct: 132 KPFPDDPTQTAYALDNGEVRYQ-----------VGAGITVSVNTPGEQ------VFGAFG 174 Query: 206 DDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGA 265 D + V+ F L + Sbjct: 175 DASG---------------------------------------IFVVVDNFKKALLANDT 195 Query: 266 RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL-QNKNNIIDTYISKSIGVEQ 324 + ++ +Q+ L I +A +G + + L N +D SK + Sbjct: 196 --TAIQNSITNLQKNLETTITAQAEMGGKQNRLEFTLSRLGDLNINYMDLQ-SKIEDADI 252 Query: 325 HTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L T + + S ++ + S+L++L Sbjct: 253 SKVIIDLKTSESVYQASLDTMARIIRPSLLDFL 285 >gi|114046845|ref|YP_737395.1| flagellar hook-associated protein FlgL [Shewanella sp. MR-7] gi|113888287|gb|ABI42338.1| flagellar hook-associated protein 3 [Shewanella sp. MR-7] Length = 402 Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 64/406 (15%), Positives = 137/406 (33%), Gaps = 60/406 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSS-----DYGLQLGARVTSILEWEQEKN 60 +S++ +F + + + K+ +++ +G+ D LG Q Sbjct: 3 LSSAQLFNQSISSVLQKQTATSKILDQLSSGKKVNTSGDDPVAALGID-----NLNQRNA 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + T L +++ L ++ M ++ G + + A LR S Sbjct: 58 LVDQFMKNIDYATNHLQQTESQLGQADALISSMKDLMLQGSNGSQTSEERQTIADDLRKS 117 Query: 121 YESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKD----------SLAKKSFDQMLQGF 169 + +T AN D G YLF+G + P S S Q+ Sbjct: 118 LDQLLTIANTKDESGNYLFAGNKTETLPFQFDANGKIVYQGDSGVHSAIIASGIQLNTNV 177 Query: 170 LEENSKSLLAGQHLEVS-SMNAQQMTDF-------------IKQLEDKFSDDEYWANNWS 215 + + + S + ++ Q +F + + F DD N Sbjct: 178 AGDTAFIKSPNAMGDYSVNYSSSQQGEFSVTSAKLDGVTPSLSDYQINFLDDGAGGINVE 237 Query: 216 NASDHNIKYRIKDTEGIDVSANVNMRGIR------------------------DIMFVAV 251 I D SA++N G++ D A+ Sbjct: 238 VTDTATPANVISAAAPFDPSASINFDGVKLSIEGEPKIGDSFTLHQEAEVSIFDTFSKAI 297 Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + + T ++ L ++L+ +Q G+ I +Q+ + G S K + + ++ I Sbjct: 298 ALFDNADQVQTPSGQSELA-QLLNNIQSGVKQISQQQGLAGNSLKVLEKYTDKHTDEKLI 356 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +SK V+ TA + + + +K+ +S+ +Y+ Sbjct: 357 NTSALSKLEDVDYATAITEFEKQQLALNAVSSVFSKVGSVSLFDYI 402 >gi|254438497|ref|ZP_05051991.1| flagellar hook-associated protein 3 [Octadecabacter antarcticus 307] gi|198253943|gb|EDY78257.1| flagellar hook-associated protein 3 [Octadecabacter antarcticus 307] Length = 420 Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 48/419 (11%), Positives = 119/419 (28%), Gaps = 67/419 (15%) Query: 5 GISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAE 64 IST + ++M +++++ ++ TG+ + + E+ + Sbjct: 2 SISTKLLSDQMVSRFSQISEEIQLRQIKISTGREITEAAEKPFEAIKLSALEEGLTQLEG 61 Query: 65 RLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + RLS L+S+ I+ + V + E+ Sbjct: 62 FGKNVGTAQSRLSMGDTVLTSVDDILAQLRERAVAANSDTFSTTDMEAFRVEVSQLREAL 121 Query: 125 VTFANM-TDEGQYLFSGINSSEKPLNGYFT----------------------KDSLAKKS 161 V AN T GQ LF G + P + S+ S Sbjct: 122 VGLANTQTSNGQALFGGYATDIVPFSEDANGRMQYRGDGGEHTLAVSETMRLPTSVNGGS 181 Query: 162 -----------------FDQMLQGFLEENSKSLLAGQHLEV-------SSMNAQQMTDFI 197 D ++S +V + + + Sbjct: 182 TFMNVQTDDGIESVFNIVDSFEAALATDDSVHGTLSGSADVGLSLSFNGDRTPRDWSLTL 241 Query: 198 KQLEDKFSDDEYWANNWSN---------ASDHNIKYRIKDTEGIDVSANVNMRGIRDIMF 248 + + SN SD ++++A+ + ++ Sbjct: 242 EGPDGSVFITALEVVGGSNDRLLEAINERSDETGVAAASVDGRLELTASEGSITLSNLDI 301 Query: 249 VAVIGTEFLSK---NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISE----KNINEE 301 V + + D + + + + L I + + IS + Sbjct: 302 GGVTLASRMPQFTITTNDDPNQTMVPR-VQLLSAQLEKITKAGQDVAISRTIVGARLQRA 360 Query: 302 RVF---LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +Q ++ +++ +++ V+ +L TL+ + + +++ + S+ ++L Sbjct: 361 NDQEASIQTRSVALESDVNELGSVDLEKVITELQTLLVMRDAARQAYSRISQGSLFDFL 419 >gi|288554149|ref|YP_003426084.1| flagellar hook-associated protein 3 (HAP3) [Bacillus pseudofirmus OF4] gi|288545309|gb|ADC49192.1| flagellar hook-associated protein 3 (HAP3) [Bacillus pseudofirmus OF4] Length = 573 Score = 57.0 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 19/154 (12%), Positives = 57/154 (37%), Gaps = 13/154 (8%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSS-----DYGLQLGARVTSILEW 55 M+ T + + + ++ + + TG+ D + + + + Sbjct: 1 MRVT--QSMLANNALRN-ISSGYANLAQIQDRLATGKKFTRASQDPVVAMNG-----MRY 52 Query: 56 EQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAG 115 + + + + + + + +S + L + + +Q + V ++N Sbjct: 53 RTQVTEVTQFKRNLAEMYNFMESSDSALGEVNQALQRIRELTVQASNDTYNSNDRKNIIQ 112 Query: 116 MLRDSYESFVTFANMTDEGQYLFSGINSSEKPLN 149 ++ E + N +YLF+G N+S++P++ Sbjct: 113 EIQQLSEHLASIGNTKVNNKYLFNGTNTSKQPID 146 Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 61/148 (41%), Gaps = 6/148 (4%) Query: 215 SNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIG-----TEFLSKNLTDGARNVL 269 S S +N I+ +G+ +++NVN + + A+I E L ++ + + + Sbjct: 426 SPVSGNNETIEIELLKGVTIASNVNTQNVISAELFAIIKEITDELELLMDDMEHSSGSKI 485 Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 L + + + ++ RA LG + + + I +S++ + Sbjct: 486 NGY-LDRLDKCMDDVLSARANLGARINRVEMIENRVLEQEVIAKRIMSENEDADMEQVII 544 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 L+T + + + ++ + S+L++L Sbjct: 545 DLTTQESVHRAAMAVGARIIQPSLLDFL 572 >gi|229524185|ref|ZP_04413590.1| flagellar hook-associated protein FlgL [Vibrio cholerae bv. albensis VL426] gi|229337766|gb|EEO02783.1| flagellar hook-associated protein FlgL [Vibrio cholerae bv. albensis VL426] Length = 397 Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 54/407 (13%), Positives = 126/407 (30%), Gaps = 69/407 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G+ SD L I Q++ Sbjct: 5 ISSFHNYQAVQNDIRRQESKVFNNQAQLASGKKLLSASDNPLA----THYIQNVGQQEEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + L + LV RL + +S+ ++ ++ ++ G A +L++ Sbjct: 61 LRQYLDAIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMA 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL------------NGYF--------------TK 154 +F+ AN+ D G Y+F+G +P + Y Sbjct: 121 NNFINLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYAGDDYQRKMKISNSLEIPFNNP 180 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS-----SMNAQQMTDFIKQLEDKFSDDEY 209 S + + + LE + A F+ E K + Sbjct: 181 GSKVFMEIPNPFGSYEPNYALQEGSELLLERAVNLNPDDTASYRVTFVDMPEGK--NGYQ 238 Query: 210 WANNWSNAS---------------DHNIKYRIKDTEGID----VSANVNMRGIRDIMFVA 250 N S + +K +I + I+ + +V RD + A Sbjct: 239 LERNGSVVQAGEFDAKTGIQFEELNIQVKGQISKGDAIELTPRTTFSVFDT-FRDAIRYA 297 Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 +++D + +++ + + R +G ++ + ++ Sbjct: 298 -------EGSVSDASNTAKLHQLVEEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKI 350 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + S ++ A + + +E S K + L++ NY+ Sbjct: 351 SLAKSKSTFEDLDYAEAVIEFNENSRALEASQKAFGKTKDLNLFNYI 397 >gi|108809048|ref|YP_652964.1| flagellar hook-associated protein FlgL [Yersinia pestis Antiqua] gi|108810755|ref|YP_646522.1| flagellar hook-associated protein FlgL [Yersinia pestis Nepal516] gi|145597824|ref|YP_001161900.1| flagellar hook-associated protein FlgL [Yersinia pestis Pestoides F] gi|150260242|ref|ZP_01916970.1| lateral flagellar hook-associated protein 3 [Yersinia pestis CA88-4125] gi|165924845|ref|ZP_02220677.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. F1991016] gi|165939078|ref|ZP_02227630.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. IP275] gi|166009056|ref|ZP_02229954.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua str. E1979001] gi|166212174|ref|ZP_02238209.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua str. B42003004] gi|167399532|ref|ZP_02305056.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419093|ref|ZP_02310846.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425107|ref|ZP_02316860.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167466330|ref|ZP_02331034.1| flagellar hook-associated protein FlgL [Yersinia pestis FV-1] gi|218927919|ref|YP_002345794.1| flagellar hook-associated protein FlgL [Yersinia pestis CO92] gi|229837415|ref|ZP_04457578.1| lateral flagellar hook-associated protein 3 [Yersinia pestis Pestoides A] gi|229840630|ref|ZP_04460789.1| lateral flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842819|ref|ZP_04462971.1| lateral flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. India 195] gi|229900952|ref|ZP_04516076.1| lateral flagellar hook-associated protein 3 [Yersinia pestis Nepal516] gi|270487665|ref|ZP_06204739.1| flagellar hook-associated protein 3 [Yersinia pestis KIM D27] gi|294502795|ref|YP_003566857.1| flagellar hook-associated protein [Yersinia pestis Z176003] gi|108774403|gb|ABG16922.1| flagellar hook-associated protein [Yersinia pestis Nepal516] gi|108780961|gb|ABG15019.1| putative flagellar hook-associated protein [Yersinia pestis Antiqua] gi|115346530|emb|CAL19407.1| putative flagellar hook-associated protein [Yersinia pestis CO92] gi|145209520|gb|ABP38927.1| flagellar hook-associated protein [Yersinia pestis Pestoides F] gi|149289650|gb|EDM39727.1| lateral flagellar hook-associated protein 3 [Yersinia pestis CA88-4125] gi|165913034|gb|EDR31659.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. IP275] gi|165923045|gb|EDR40196.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. F1991016] gi|165992395|gb|EDR44696.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua str. E1979001] gi|166206920|gb|EDR51400.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua str. B42003004] gi|166963087|gb|EDR59108.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167052036|gb|EDR63444.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055870|gb|EDR65651.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682291|gb|EEO78383.1| lateral flagellar hook-associated protein 3 [Yersinia pestis Nepal516] gi|229690086|gb|EEO82143.1| lateral flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. India 195] gi|229696996|gb|EEO87043.1| lateral flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705538|gb|EEO91548.1| lateral flagellar hook-associated protein 3 [Yersinia pestis Pestoides A] gi|262360827|gb|ACY57548.1| flagellar hook-associated protein [Yersinia pestis D106004] gi|262364772|gb|ACY61329.1| flagellar hook-associated protein [Yersinia pestis D182038] gi|270336169|gb|EFA46946.1| flagellar hook-associated protein 3 [Yersinia pestis KIM D27] gi|294353254|gb|ADE63595.1| flagellar hook-associated protein [Yersinia pestis Z176003] gi|320016704|gb|ADW00276.1| lateral flagellar hook-associated protein 3 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 307 Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 1/151 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST ++ MN + N+ K++++M+T Q + T +L+ +E+ +I + Sbjct: 3 VSTPTMSSTMNRFITQHNEKLEKINKQMMTQQRITLPSEDPIASTRLLQINREQANIKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S ++ L+ H+S++ K + + LV + N A L ES V Sbjct: 63 SSNISGLSNSLTNQTGHVSAINKQLVSIKSSLVSINGNIKSNKDIAGVADELNYMLESVV 122 Query: 126 TFANM-TDEGQYLFSGINSSEKPLNGYFTKD 155 N EG+YLF+G S+++P+ K+ Sbjct: 123 AGLNAKNSEGRYLFAGTASNKQPITFDSAKN 153 >gi|313682312|ref|YP_004060050.1| flagellar hook-associated protein flgl [Sulfuricurvum kujiense DSM 16994] gi|313155172|gb|ADR33850.1| flagellar hook-associated protein FlgL [Sulfuricurvum kujiense DSM 16994] Length = 703 Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 89/247 (36%), Gaps = 5/247 (2%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I++ S + + ++NK +++++ +GQ Y + + + + + E + + Sbjct: 3 ITSGSYYNNIYGENNKINKQLFDVNKQISSGQKIQYAHEDPSIFINTIRLDDELTTLGQV 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 +S K + + + + K ++ M L+ + A LR + Sbjct: 63 KNSAQNAYKFSTQTDTTIGDIVKTLESMKVKLLNAASDTQSDASRNAIAQDLRGLQNHLL 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLN---GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 T AN + GQ++FSG S KP++ Y D + L+ + L G Sbjct: 123 TLANTSIGGQFIFSGTALSVKPIDENGNYKGNDKTLEAFLGAGLKQPYNISGAQLFFGDE 182 Query: 183 LEVS-SMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ + + L +++S + I+D D +++ Sbjct: 183 SIINRKITTNVPQTSLTDLYPNIMQGSQIPDSFSKETYITSSSTIRD-LMGDTNSDATDD 241 Query: 242 GIRDIMF 248 +R F Sbjct: 242 PLRKAYF 248 Score = 35.8 bits (81), Expect = 9.0, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 32/94 (34%) Query: 264 GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE 323 RN+ + + + + + + G + + T S I + Sbjct: 610 DPRNIGIQNSIQKMDDLTDHVSRLQTLAGSYSQVLQASSDRSDLLIISTKTLQSDVIDTD 669 Query: 324 QHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +L L + +K+ +LS++NYL Sbjct: 670 IAESQLKLQQLTLNYQALLSNISKVSQLSLVNYL 703 >gi|319790355|ref|YP_004151988.1| flagellar hook-associated protein 3 [Thermovibrio ammonificans HB-1] gi|317114857|gb|ADU97347.1| flagellar hook-associated protein 3 [Thermovibrio ammonificans HB-1] Length = 312 Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 120/356 (33%), Gaps = 51/356 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST +F+ + + + + EE+ +G+S +L ++ ++ Sbjct: 3 ISTGELFDLFIRYDRLKSAEIKRKAEELSSGKSILRPSDSPVDYARLLRLDRFVENLDRF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDSYESF 124 + LV + T+++ L+S + ++ ++ IL G + A + Sbjct: 63 NRNIDLVKANMDTAESALASTVQTLEAARVKIIQILNTGALNGEDAKTLADYFESVKDYV 122 Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + N YLF G+ + P + D QG E + + G + Sbjct: 123 IQMGNEKVGDAYLFGGVKTQSPPFDS------------DGTYQGETRETTVPVANGVEVS 170 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + ++ + Y+ N + +I E +D + G Sbjct: 171 TN-----------------YNGENYFGVN-------RVSGKITVVEVLDRIVQIIQSGDL 206 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE---E 301 + A + + T K+L GLS I+E R++LG +++ + Sbjct: 207 SQLDSATVTVDLGDGPQ--------TMKLLDAFDAGLSKIMEYRSILGTQVALVDDLKTQ 258 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + I + + + + T L++LS+LN+L Sbjct: 259 NEAVALHAKELRSKIGD---ADFASVISDYDKAKTAYQALLSTYTDLKQLSLLNFL 311 >gi|22127320|ref|NP_670743.1| flagellar hook-associated protein FlgL [Yersinia pestis KIM 10] gi|21960401|gb|AAM86994.1|AE013948_2 hypothetical [Yersinia pestis KIM 10] Length = 308 Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 1/151 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST ++ MN + N+ K++++M+T Q + T +L+ +E+ +I + Sbjct: 4 VSTPTMSSTMNRFITQHNEKLEKINKQMMTQQRITLPSEDPIASTRLLQINREQANIKQY 63 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S ++ L+ H+S++ K + + LV + N A L ES V Sbjct: 64 SSNISGLSNSLTNQTGHVSAINKQLVSIKSSLVSINGNIKSNKDIAGVADELNYMLESVV 123 Query: 126 TFANM-TDEGQYLFSGINSSEKPLNGYFTKD 155 N EG+YLF+G S+++P+ K+ Sbjct: 124 AGLNAKNSEGRYLFAGTASNKQPITFDSAKN 154 >gi|163789662|ref|ZP_02184100.1| Flagellin-like protein [Carnobacterium sp. AT7] gi|159875194|gb|EDP69260.1| Flagellin-like protein [Carnobacterium sp. AT7] Length = 305 Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 110/357 (30%), Gaps = 59/357 (16%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + + S + L +E+ + SD L +V+ IL+ Sbjct: 8 MSKSFLRNLSANTS---NVMKYQNQLSTL-KEVS--KPSDDPL----KVSKILDLNNSII 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + + + LSS + +Q + + G + N + Sbjct: 58 QNDQYKTTINDAIQWTNVQDSALSSATESMQRIKTLIQYSANGTLSHEDRQANKAEIESE 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + N G+Y+F+G+N++EKP + Sbjct: 118 IQGTIDALNTNFGGRYVFAGMNTTEKP------------------------------FSI 147 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 + + + S + + ++D +E + Sbjct: 148 DKDDAGEITGITYNNDKDTGHGNLSREIAPGVSVELSTDGRNFMNTNGSEDLGT------ 201 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 E ++ L++ +LS Q + ++ R+ G + Sbjct: 202 ----FFSKALKALDEDDTEGLSN---------LLSRADQEIENVVSNRSKTGSIFNRLTA 248 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + T +S++ ++ + Q + + + + + TK+ SIL+YL Sbjct: 249 TLERNDSEKLNLKTMLSENQDIDLAEKYMQFTMEKSAYQAALSMGTKILDTSILDYL 305 >gi|289666056|ref|ZP_06487637.1| flagellar hook-associated protein FlgL [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670518|ref|ZP_06491593.1| flagellar hook-associated protein FlgL [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 401 Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 60/398 (15%), Positives = 121/398 (30%), Gaps = 44/398 (11%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ISTS ++ + ++ ++ +GQ + + ++ Sbjct: 1 MTDRISTSMMYSQSVASMGAKQARLNQIESQLSSGQRLVTAKDDPVAAGTAVGLDRALAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + V RL + LS + + V + A L Sbjct: 61 ITRFGENANNVQNRLGLQENALSQAGDKMARVTELAVQANNSSLSPDDRKAIASELTALR 120 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPL----NGYFTKDSLAKKSFDQMLQGFLEENSKS 176 +S ++ AN TD G+YLF G P +K + F+ + Sbjct: 121 DSMLSLANSTDGTGRYLFGGTADGSAPFIKSSGNVTYNGDQTQKQVEVAPDTFVSDTLPG 180 Query: 177 LL------AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSN----ASDH------ 220 G + NA + + + W + + A+D Sbjct: 181 SEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDASTGTWNGSSYSVQFTAADTYEVRDS 240 Query: 221 -------------------NIKYRIKDTEGIDVSANVNMRGIRDIMFVA-VIGTEFLSKN 260 ++ RI + S + G +D+ + + S Sbjct: 241 TNAVVSTGTYKEGQDIKAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDDMVSALNSDT 300 Query: 261 LTDGARNVLTKK---MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 LT + +T + + Q S +I+ RA G I+ L++ + T +S Sbjct: 301 LTAPQKASMTNTLQSSMRDIAQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLS 360 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ +A Q ++ + I ++Q S+ N Sbjct: 361 SIRDLDYASAIGQYQLEKASLQAAQTIFQQMQSSSLFN 398 >gi|118588733|ref|ZP_01546141.1| hypothetical protein SIAM614_18544 [Stappia aggregata IAM 12614] gi|118438719|gb|EAV45352.1| hypothetical protein SIAM614_18544 [Stappia aggregata IAM 12614] Length = 511 Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 73/206 (35%), Gaps = 21/206 (10%) Query: 161 SFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDH 220 + ++ + F E + + +++ S W + +D Sbjct: 318 AAEEFFKTFGGEEPQRVDGPPFDSATALTGGG------------STTVAWYTGRNTPTDD 365 Query: 221 NIKYR---IKDTEGIDVSANVNMRGIRDIM--FVAVIGTEF-LSKNLTDGARNVLTKKML 274 + I + N + +++++ A I +F + N L+ + Sbjct: 366 PRTDKNAVIDSNLTVQYGIRANEKPLQELVQSLAAFIAADFSGGTTTDEEYYNTLSTNLR 425 Query: 275 STV---QQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQL 331 +T+ SGI + + I+ + ++ + I+ G++Q A++ Sbjct: 426 TTLQPPGVDQSGITDIATDIAITHRTVSLTDERHVQMKSSYQGTIADIEGIDQDQVAAEI 485 Query: 332 STLINKIEMSYMITTKLQKLSILNYL 357 L IE+SY ++ + L++ +YL Sbjct: 486 LQLQTNIEVSYRASSIVFNLTLSDYL 511 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 5/191 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + I+TS + ELN ++ G+ ++G R ++ Q+ + Sbjct: 1 MAVSNITTS--RTYLTRQLGELNDMLASKTTQLARGKVGTTYGEVGDRRLLDIQLTQKVS 58 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 I + ++ L TS L ++ I QD L D+ + + Sbjct: 59 MIESYQDTITIANLHLQTSTMSLERLEDIRQDAKSALDTNDFVLQDDGQ-TQTQSRAKLL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLN--GYFTKDSLAKKSFDQMLQGFLEENSKSLL 178 + N G Y+F G ++ + P+ + + ++ + E N Sbjct: 118 LNEALNILNTEVAGFYVFGGTDAVQDPVARIDAILDGANGRDGLRTVMSEYSEANLGVGN 177 Query: 179 AGQHLEVSSMN 189 G+ + Sbjct: 178 NGRTTTSALTT 188 >gi|255523747|ref|ZP_05390713.1| flagellar hook-associated protein 3 [Clostridium carboxidivorans P7] gi|296186749|ref|ZP_06855151.1| flagellar hook-associated protein 3 [Clostridium carboxidivorans P7] gi|255512616|gb|EET88890.1| flagellar hook-associated protein 3 [Clostridium carboxidivorans P7] gi|296048786|gb|EFG88218.1| flagellar hook-associated protein 3 [Clostridium carboxidivorans P7] Length = 450 Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 45/138 (32%) Query: 24 KDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 + ++ +M TG++ V ++ + + + + L T+ L Sbjct: 21 NNLQRIQRQMSTGKNFTKPSDDPFNVARSMQMHTAIDANTQYNKNITNTINWLDTTDTAL 80 Query: 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINS 143 + + + Q + LV +++ + N T G+Y+F G Sbjct: 81 NQLGNVFQSIREKLVASGNAAYGSDERTKIKDEINQRIGQIAQILNTTFAGEYVFGGTKG 140 Query: 144 SEKPLNGYFTKDSLAKKS 161 + KP++ S Sbjct: 141 ASKPVDASMDSSIGPVDS 158 >gi|299131802|ref|ZP_07024997.1| conserved hypothetical protein [Afipia sp. 1NLS2] gi|298591939|gb|EFI52139.1| conserved hypothetical protein [Afipia sp. 1NLS2] Length = 515 Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 53/149 (35%), Gaps = 11/149 (7%) Query: 220 HNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF---------LSKNLTDGARNVLT 270 + ++ + + A N R+++ + +NL + + L Sbjct: 364 NTAVAQVDGSVSVSYGATANESAFRNLLQNMAVYAAVTTTVDPNDPNGQNLANAQISALN 423 Query: 271 KK--MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAH 328 ++ VQ G + + + A ++ ++ T + + GV Sbjct: 424 ERVNANLAVQPGTTSVEDIEAQFAGAQSATKSASTRQTQTTSMAQTMLDQIQGVNDDEVA 483 Query: 329 AQLSTLINKIEMSYMITTKLQKLSILNYL 357 A++ L ++ SY T L +LS++ YL Sbjct: 484 AKILALQTSLQASYQTTASLYQLSLVKYL 512 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 25/206 (12%), Positives = 63/206 (30%), Gaps = 5/206 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M G+S + + L +++ +G+ S LG + + Sbjct: 1 MTIEGVS--GRTSYLGSSLLNIKTQLDTLTQQLASGKKSTTYSGLGLDSAFATGLRSQIS 58 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ ++ + VT R++ + L + + + + N + + S Sbjct: 59 MLSGYQNTQTNVTTRINVANLSLQGLVDMRTQVQSAATGASQVLNANGQTS-GQQIGYAS 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEK--PLNGYFTKDSLAKKSFDQMLQGFLEENSKSLL 178 + ++ N +YLFSG + + K ++ L + + Sbjct: 118 FTQAISLLNTQSGDRYLFSGRATDTPSTAAADDILNGADGKDGLKAVIADRLIADQGTGN 177 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKF 204 G+ ++ +T F Sbjct: 178 MGRLTTDATTTPGVVTVGEDANPSPF 203 >gi|170725962|ref|YP_001759988.1| flagellar hook-associated protein FlgL [Shewanella woodyi ATCC 51908] gi|169811309|gb|ACA85893.1| flagellar hook-associated protein 3 [Shewanella woodyi ATCC 51908] Length = 396 Score = 56.3 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 56/394 (14%), Positives = 135/394 (34%), Gaps = 42/394 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ISTS +F + + + K+ +++ +G+ + I Q+ + + Sbjct: 3 ISTSQMFNQSINSVLDKQTATSKILDQLSSGKKVNTAGDDPVASVGIDNLNQQNALVDQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + RL S++ L + + +V ++ + G ++ + A L+ + E V Sbjct: 63 MKNIDYAKNRLGLSESKLGTAETLVASTREQVIRAINGGLSESERQMIADELKGTLEELV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKD----------SLAKKSFDQMLQGFLEENS 174 AN D G Y+F+G + ++P + S + +N+ Sbjct: 123 AVANTKDESGNYIFAGFETGKQPFAFDSAGNMIYSGDNGAREAVIASGVTIATNIPGDNA 182 Query: 175 -KSLLAGQHLEVSSMNAQQMTDF------IKQLEDKFSDDEYWANNWSN-----ASDHNI 222 + +G ++ A Q+ +F I D + +N +S + Sbjct: 183 FMNAPSGLGDYSANYLASQVGEFSVDSAKITNPGTYVEDTYTFTMVGANLEVRDSSATLV 242 Query: 223 KYRIKDTEGIDVSANVNM---RGIRDIMFVAVI-----GTEFLSKN-----------LTD 263 + +S N G+ I + F + N + Sbjct: 243 TTEVGFDPTNPISFNGMEVKLDGMPTAGDSFSITPQSEVSIFDTINQAISLLEDPNKVNT 302 Query: 264 GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE 323 ++L+ + G++ I R+ G S K+I ++ + + +S ++ Sbjct: 303 PQGVSELAQILNNIDSGVNQISIARSETGNSLKSIESYSTHHVDEKLVNSSTLSMLEDLD 362 Query: 324 QHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +A + + + +K+ +S+ +Y+ Sbjct: 363 YASAITEFEKQQLALNAVSSVFSKVGSVSLFDYI 396 >gi|295096218|emb|CBK85308.1| flagellar hook-associated protein 3 [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 311 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 99/328 (30%), Gaps = 48/328 (14%) Query: 31 EEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIV 90 E+M TG+ + + + Q + ++ + S T ++S + LS + + Sbjct: 22 EQMSTGKRINRPSDDPIAASQAVVLSQAQTQNSQYALARSFATTKVSLEENVLSQVTTAI 81 Query: 91 QDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYLFSGINSSEKPLN 149 Q +V G ++ A L+ + + AN TD G+Y+FSG + + Sbjct: 82 QAAQEKIVNAGNGTLSDDDRASLATNLQGIRDQLMNLANSTDGNGRYIFSGYKTEAAAFD 141 Query: 150 ----GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFS 205 Y + + D + ++ D Sbjct: 142 QTTGDYKGGGTPISQQVDSARTMQISH----------------TGTEVFDSFTSNAKPEP 185 Query: 206 DDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGA 265 D N D I+ + T A Sbjct: 186 DGSAPETNLFKILDSAIE---------------------------ALNTPIGEDETKAEA 218 Query: 266 RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 K + L+ ++ RA LGI + + +++ +S + V+ + Sbjct: 219 FTAAIDKANRGLSNSLNNVLTVRADLGIKLDELGKLDALGEDRALGQTQQMSNLVDVDWN 278 Query: 326 TAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + + ++ SY + +Q +S+ Sbjct: 279 SVISSYTMQQAALQASYKAFSDMQGMSL 306 >gi|300854138|ref|YP_003779122.1| putative flagellar hook-associated protein [Clostridium ljungdahlii DSM 13528] gi|300434253|gb|ADK14020.1| putative flagellar hook-associated protein [Clostridium ljungdahlii DSM 13528] Length = 468 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 66/187 (35%), Gaps = 4/187 (2%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ ++ + + ++ K+ +++ + ++ V ++ + N+ + Sbjct: 3 ITNKTLSDNFLADMQRNLENLSKVQQQVSSTKNFSKPSDDPINVERAMQLQSSVNYTTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+ L + ++ ++ L T + K IN + ++ + Sbjct: 63 GSNIKTANTWMETTDTTLGQIGTVLSNIRNNLEQAGGVYTQDEKDKINDAVSQE-VQQVA 121 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF---DQMLQGFLEENSKSLLAGQH 182 T N +G+Y+F G KP+ + + + D FL S + Sbjct: 122 TLLNTNFQGEYIFGGTAGLSKPITTTTDANGIVSLQYADKDGNAVQFLPSVESSGFDKGN 181 Query: 183 LEVSSMN 189 E S+ Sbjct: 182 WEGKSIT 188 >gi|52841458|ref|YP_095257.1| flagellar hook-associated protein FlgL [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628569|gb|AAU27310.1| flagellar hook associated protein type 3 FlgL [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 411 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 49/409 (11%), Positives = 116/409 (28%), Gaps = 57/409 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ I++R + +L ++ +G I +Q N+I Sbjct: 3 ISTNQIYQRGLDNLLTQQERLARLQDQQASGIRVRTPSDDPVASAQIELIKQRINNIELF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 ++ L + LS+ + + + A + + Sbjct: 63 QNNRQAADSALRLEEGILSNAVNSLHRLREIQIQAGNPSLSEEDRKTLAVEAQALLNQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN----------------GYFTKDSLAKKSFDQMLQG 168 +AN D G Y+FSG S +P++ SL D Sbjct: 123 DYANTKDSNGSYMFSGSKSLTQPVSLNLSGQYVYNGDSTQRFQAVTTSLLVAVNDTGDNV 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIK- 227 F+ S + ++ + + + ++ S N+ + Sbjct: 183 FMRIPSGNGRFAIRETLTPNTGTASVSSGSVTNEAAFVPDNYTMTFALNSQGNLVVMVSG 242 Query: 228 ---------------------------------------DTEGIDVSANVNMRGIRDIMF 248 + +S N + Sbjct: 243 TLSGNVIPPSGLPDDAPLYQEGSAIGFNGMEMVVSGLPKAGDSFSISPAKNESIFSTVQR 302 Query: 249 VAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNK 308 + + + ++ A ++L+ + L I+ ++ LG + + Sbjct: 303 MINNLNKPYTSSVEKAATQTENNQLLAQIDSALGHILSVQSDLGARLNQLETAEKANNDY 362 Query: 309 NNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +I + K ++ +L+ + ++ + + T++Q LS+ N+L Sbjct: 363 LDISAATLKKLREIDPVAVATELNLQLVNLQAAQLSFTRIQGLSLFNFL 411 >gi|42527854|ref|NP_972952.1| flagellar hook-associated protein FlgL [Treponema denticola ATCC 35405] gi|41818682|gb|AAS12871.1| flagellar hook-associated protein 3 [Treponema denticola ATCC 35405] Length = 415 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 47/403 (11%), Positives = 116/403 (28%), Gaps = 64/403 (15%) Query: 14 RMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVT 73 M L+ + ++ + Q D + G + ++ + + + Sbjct: 17 SMRNQESRLHNLNNQIQSQRRINQLRDDPVSAGH----SVRYKSYLARLERFEKNTKTLR 72 Query: 74 KRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFAN-MTD 132 + +++ ++++ ++VQ + V G + A + + V N + Sbjct: 73 DQYMSAETYMNNSLQVVQRLRELSVQGANGTYTPDDLKDMAAEADELLKELVQNGNAVNS 132 Query: 133 EGQYLFSGINSSEKP----LNGYFTKDSLAKKSF-----------DQMLQGFLEENSKSL 177 +G +FSG S +P + S + F+ + Sbjct: 133 DGVRVFSGTKSFTEPFETVMGDVDGAGSALITQVRYNGTVDSKEVETDELSFMRADQAGN 192 Query: 178 LAGQHLEVSSMNAQQMTDFI---------KQLEDKFSDDEYWANNWSNASDHNIKYRIKD 228 ++ +F+ +E + S +D + Sbjct: 193 RVFWAERQILISETDARNFVIKEDTSIEVDGVEIPLIAGDNVYAIMSKINDSGAAVKASL 252 Query: 229 TEGIDVSANVNMRGIRDI----MFVAVIGTEFL-------------------SKNLTDGA 265 + I N+ R + + + +E +L D A Sbjct: 253 -DPITSGLNLTTTDARQLWLRDAEGSTVLSELGLIKAEQRPPYNLANSVRVSGGSLFDAA 311 Query: 266 -----------RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 + L K+L ++ +G+ + + A G + + + Sbjct: 312 IAVRDAFLSGDQEALGGKVLGSLDEGIHNLTTRMAETGSKYSRAEVILARIDTQTLNVTA 371 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S+ ++ A L + + S + +L + S+LNYL Sbjct: 372 AESREADLDITKAITDLKMFEHTHQASLSVLGRLYRDSLLNYL 414 >gi|237731014|ref|ZP_04561495.1| flagellar hook-associated protein FlgL [Citrobacter sp. 30_2] gi|226906553|gb|EEH92471.1| flagellar hook-associated protein FlgL [Citrobacter sp. 30_2] Length = 317 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 112/349 (32%), Gaps = 40/349 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 3 ISTQMMYQQNMRGITNSQAEWMKFGEQMSTGKRVINPSDDPIAASQAVVLSQAQAQNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S T+++S + LS + +Q +V G ++ A L+ + + Sbjct: 63 TLARSFATQKVSLEENVLSQVTTAIQAAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F G + P S + Q + + + Sbjct: 123 NLANSTDGNGRYIFGGYKTESAPFAQADGAYSGGTTNVTQQVDA---SRTMVIGHTGDKV 179 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 +++ + + N + + +D + + Sbjct: 180 FANLTS--------NAVPEPGGGTQEKNLF---------------KMLDTAIDA------ 210 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + T ++ K ++ L+ ++ RA LG ++ Sbjct: 211 -------LKTPIEGNDVAKATAAAAIDKTNRGLKNSLNNVLSVRAELGTQLSELSSLDSL 263 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + A + ++ SY T +Q +S+ Sbjct: 264 GADRALGQTQQMSNLVDVDWNAAISSYVMQQAALQASYKAFTDMQGMSL 312 >gi|116872095|ref|YP_848876.1| flagellar hook-associated protein FlgL [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740973|emb|CAK20093.1| flagellar hook-associated protein FlgL, putative [Listeria welshimeri serovar 6b str. SLCC5334] Length = 291 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 64/150 (42%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ + ++ + K ++ +G+ + + IL + + + Sbjct: 3 ISTNQQANSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+T++ LSSM + + ++ + G +D N +A ++ + V Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKNNMSQSAEEIKGLLDVLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKD 155 + AN D+G+Y+FSG ++S KP T Sbjct: 123 SVANAEDDGRYVFSGSSTSVKPFTTDKTTG 152 Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 7/160 (4%) Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 F+ D+ N + N K+R+ T+ ++V + + D+ + + Sbjct: 139 STSVKPFTTDKTTGEIIYNGTTENKKFRV--TDTLEVEVFHDGSAMTDVFNNIQKIVDAM 196 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 A + L T Q + I +G + ++ L +K S Sbjct: 197 KSG-DKDALSAL----QETNSQNIEIITNSMTNIGGQKNGVSAYDNVLSSKITDFTERKS 251 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V A + L+ + + + +QKLSILNY+ Sbjct: 252 NVEEVNMPEAVSNLNKTSIAYQAALQSSVMVQKLSILNYM 291 >gi|254459847|ref|ZP_05073263.1| flagellar hook-associated protein 3 [Rhodobacterales bacterium HTCC2083] gi|206676436|gb|EDZ40923.1| flagellar hook-associated protein 3 [Rhodobacteraceae bacterium HTCC2083] Length = 420 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 1/147 (0%) Query: 5 GISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAE 64 IST +RM +LN + ++ TGQ+ + + E+ + + Sbjct: 2 SISTKLFSDRMLTRFADLNDEIQVRQTKISTGQAIIEASESPLAAVELSALEERVSQLDG 61 Query: 65 RLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + L RL S LS + I+ + + + + + +++ Sbjct: 62 FKRNVGLAQDRLVLSDTTLSDVDTILSRLREQAITASSSTANVSDLNAIEIEVAQMFDAM 121 Query: 125 VTFANM-TDEGQYLFSGINSSEKPLNG 150 V AN T GQ LF G + P Sbjct: 122 VDLANTRTSNGQALFGGYATDGLPFQE 148 >gi|315281369|ref|ZP_07870007.1| flagellar hook-associated protein 3 [Listeria marthii FSL S4-120] gi|313614986|gb|EFR88492.1| flagellar hook-associated protein 3 [Listeria marthii FSL S4-120] Length = 291 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 64/150 (42%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ + ++ + K ++ +G+ + + IL + + + Sbjct: 3 ISTNQQANSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+T++ LSSM + + ++ + G +D N +A ++ + V Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKNNMSQSAEEIKGLLDVLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKD 155 + AN D+G+Y+FSG ++S KP T Sbjct: 123 SVANAEDDGRYVFSGSSTSVKPFTTDKTTG 152 Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 7/160 (4%) Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 F+ D+ N + N +R+ T+ ++V + + D+ + + Sbjct: 139 STSVKPFTTDKTTGEIIYNGTTENKNFRV--TDTLEVEVFHDGSALTDVFNNIQKIVDAM 196 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 A + L T Q + I +G + ++ L +K S Sbjct: 197 KSG-DKDALSAL----QETNSQNIEIITNSMTNIGGQKNGVSAYDNVLSSKITDFAERKS 251 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V A + L+ + + + +QKLSILNY+ Sbjct: 252 NVEEVNMPEAVSNLNKTSIAYQAALQSSVMVQKLSILNYM 291 >gi|162418771|ref|YP_001604840.1| flagellar hook-associated protein FlgL [Yersinia pestis Angola] gi|162351586|gb|ABX85534.1| flagellar hook-associated protein 3 [Yersinia pestis Angola] Length = 307 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 1/151 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST ++ MN + N+ K++++M+T Q + T +L+ +E+ +I + Sbjct: 3 VSTPTMSSTMNRFITQHNEKLEKINKQMMTQQRITLPSEDPIASTRLLQINREQANIKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S ++ L+ H+S++ K + + LV + N A L ES V Sbjct: 63 SSNISGLSNSLTNQTGHVSAINKQLVSIKSSLVSINGNIKSNKDIAGVADELNYMLESVV 122 Query: 126 TFANM-TDEGQYLFSGINSSEKPLNGYFTKD 155 N EG+YLF+G S+++P+ K+ Sbjct: 123 AGLNAKNSEGRYLFAGTASNKQPITFDSAKN 153 >gi|58582203|ref|YP_201219.1| flagellar hook-associated protein FlgL [Xanthomonas oryzae pv. oryzae KACC10331] gi|84624095|ref|YP_451467.1| flagellar hook-associated protein FlgL [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188576763|ref|YP_001913692.1| flagellar hook-associated protein FlgL [Xanthomonas oryzae pv. oryzae PXO99A] gi|188576955|ref|YP_001913884.1| flagellar hook-associated protein FlgL [Xanthomonas oryzae pv. oryzae PXO99A] gi|58426797|gb|AAW75834.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368035|dbj|BAE69193.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521215|gb|ACD59160.1| flagellar hook-associated protein 3 [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521407|gb|ACD59352.1| flagellar hook-associated protein 3 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 401 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 59/399 (14%), Positives = 119/399 (29%), Gaps = 46/399 (11%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ISTS ++ + ++ ++ +GQ + + ++ Sbjct: 1 MTDRISTSMMYSQSVASMGAKQARLNQIEAQLGSGQRLVTAKDDPVAAGTAVGLDRALAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + V RL + LS + + V + A L Sbjct: 61 ITRFGENANNVQNRLGLQENALSQAGDKMARVTELAVQANNSSLSPDDRKAIAAELTALR 120 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPL----NGYFTKDSLAKKSFDQMLQGFLEENSKS 176 +S V+ AN TD G+YLF G P +K + F+ + Sbjct: 121 DSMVSLANSTDGTGRYLFGGTADGSAPFIKSSGNVTYNGDQTQKQVEVAPDTFVSDTLPG 180 Query: 177 LLAGQHLEVSSMNAQQMTDFIKQLEDKF--SDDEYWANNWSNASDHNIKYRIKDTEGIDV 234 + + + +W+ AS +++++ +T + Sbjct: 181 SEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDISTGSWNGAS-YSVQFTAANTYEVRD 239 Query: 235 SANV-------------NMRGIRDIMFVAV----------------------IGTEFLSK 259 S N N G+R + A + S Sbjct: 240 STNAVVSTGTYKEGQDINAAGVRMRISGAPAVGDSFQIGASGSKDVFSTIDDMVGALNSD 299 Query: 260 NLTDGARNVLTKK---MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYI 316 LT + + + + Q S +I+ RA G I+ L++ + T + Sbjct: 300 TLTAPQKASMINTLQSSMRDIAQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTL 359 Query: 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 S ++ +A Q ++ + I ++Q S+ N Sbjct: 360 SSIRDLDYASAIGQYQLEKASLQAAQTIFQQMQSSSLFN 398 >gi|16802748|ref|NP_464233.1| flagellar hook-associated protein FlgL [Listeria monocytogenes EGD-e] gi|47095272|ref|ZP_00232883.1| flagellar hook-associated protein FlgL, putative [Listeria monocytogenes str. 1/2a F6854] gi|224498788|ref|ZP_03667137.1| flagellar hook-associated protein FlgL [Listeria monocytogenes Finland 1988] gi|224501989|ref|ZP_03670296.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL R2-561] gi|254829363|ref|ZP_05234050.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL N3-165] gi|254830303|ref|ZP_05234958.1| flagellar hook-associated protein FlgL [Listeria monocytogenes 10403S] gi|254900058|ref|ZP_05259982.1| flagellar hook-associated protein FlgL [Listeria monocytogenes J0161] gi|254911389|ref|ZP_05261401.1| flagellar hook-protein FlgL [Listeria monocytogenes J2818] gi|254935716|ref|ZP_05267413.1| flagellar hook-associated protein FlgL [Listeria monocytogenes F6900] gi|16410095|emb|CAC98784.1| lmo0706 [Listeria monocytogenes EGD-e] gi|47016343|gb|EAL07265.1| flagellar hook-associated protein FlgL, putative [Listeria monocytogenes str. 1/2a F6854] gi|258601776|gb|EEW15101.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL N3-165] gi|258608299|gb|EEW20907.1| flagellar hook-associated protein FlgL [Listeria monocytogenes F6900] gi|293589326|gb|EFF97660.1| flagellar hook-protein FlgL [Listeria monocytogenes J2818] Length = 291 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 64/150 (42%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ + ++ + K ++ +G+ + + IL + + + Sbjct: 3 ISTNQQASSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+T++ LSSM + + ++ + G +D + +A ++ + + Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKDNMSQSAEEIKGLLDVLI 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKD 155 + AN D+G+Y+FSG ++S KP T Sbjct: 123 SVANSEDDGRYVFSGSSTSVKPFTTDKTTG 152 Score = 36.6 bits (83), Expect = 5.8, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 7/160 (4%) Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 F+ D+ N + N K+R+ T+ ++V + + D+ + + Sbjct: 139 STSVKPFTTDKTTGEIIYNGTTENKKFRV--TDTLEVEVFHDGSAMTDVFNNIQKIVDAM 196 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 A + L T + + I +G + + L +K S Sbjct: 197 KTG-DKDALSAL----QETNSKNIEIITNSMTNIGGQKNGVTAYDNVLSSKIVDFSERKS 251 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V A + L+ + + + +QKLSILNY+ Sbjct: 252 NVEEVNMPEAVSNLNKTSIAYQAALQSSVMVQKLSILNYM 291 >gi|148358813|ref|YP_001250020.1| flagellar hook associated protein type 3 FlgL [Legionella pneumophila str. Corby] gi|296106858|ref|YP_003618558.1| flagellar hook-associated protein 3 FlgL [Legionella pneumophila 2300/99 Alcoy] gi|148280586|gb|ABQ54674.1| flagellar hook associated protein type 3 FlgL [Legionella pneumophila str. Corby] gi|295648759|gb|ADG24606.1| flagellar hook-associated protein 3 FlgL [Legionella pneumophila 2300/99 Alcoy] Length = 411 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 50/409 (12%), Positives = 116/409 (28%), Gaps = 57/409 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ I++R + +L ++ +G I +Q ++I Sbjct: 3 ISTNQIYQRGLDNLLTQQERLSRLQDQQASGIRVRTPSDDPVASAQIELIKQRISNIELL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 ++ L + LS+ + + + A + + Sbjct: 63 QNNRQAADSALRLEEGILSNTVNSLHRLREIQIQSGNPSLSEEDRKTLAVEAQALLNQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN----------------GYFTKDSLAKKSFDQMLQG 168 +AN D G Y+FSG S +P++ SL D Sbjct: 123 DYANTKDSNGSYMFSGSKSLTQPVSLNLSGQYVYNGDNTQRFQAVTTSLLVAVNDTGDNV 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIK----- 223 F+ S + V+ + + + + ++ S N+ Sbjct: 183 FMRIPSGNGRFAIRETVTPNTGTASVSSGSVINEAAFVPDNYTMTFALNSQGNLVVMVSG 242 Query: 224 ----------------------YRIK-------------DTEGIDVSANVNMRGIRDIMF 248 I + +S N + Sbjct: 243 TLSGNVIPPSGLPDDAPLYQEGSAISFNGMEMVVSGLPKAGDSFSISPAKNESIFSTVQR 302 Query: 249 VAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNK 308 + + ++ A ++L+ + L I+ ++ LG + + Sbjct: 303 MINNLNKPYVSSVEKAATQTENNQLLAQIDSALGHILSVQSDLGARLNQLETAEKANNDY 362 Query: 309 NNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +I + K ++ +L+ + ++ + + T++Q LS+ N+L Sbjct: 363 LDISAATLKKLREIDPVAVATELNLQLVNLQAAQLSFTRIQGLSLFNFL 411 >gi|294635620|ref|ZP_06714096.1| flagellar hook-associated protein 3 [Edwardsiella tarda ATCC 23685] gi|291091003|gb|EFE23564.1| flagellar hook-associated protein 3 [Edwardsiella tarda ATCC 23685] Length = 315 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 113/337 (33%), Gaps = 38/337 (11%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 + + ++ +M +G+ + ++ Q K+ + + + S Sbjct: 10 VLDAQSEWQRIGAQMDSGKRVIVPSDDPLAASQLVGLNQAKSMNEQYGMARGYARQSTSM 69 Query: 79 SQAHLSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQY 136 ++ L + ++Q+ LV + G ++ A L + + AN TD G+Y Sbjct: 70 EESVLQQVTNVMQNATPVLVDGMSSGTKSDDDRAAIATQLESMRDQLINLANSTDGNGRY 129 Query: 137 LFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDF 196 +F+G S P +A D+ L ++ ++ +V Sbjct: 130 IFAGYKSDTAPFA-KNATGGVAYSGGDKALTQQVDAARTMTVSHTGKQV----------- 177 Query: 197 IKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF 256 + +AS + IK + + +++ D + + G + Sbjct: 178 -----------------FLSASSNPIK---EPDGSVQNDIFASLQKAIDALKTPLAGADD 217 Query: 257 LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYI 316 +K D N ++ L+ + + RA LG ++ T I Sbjct: 218 ATKQKVDDDLNS----ANRGLRNSLNNVSQVRAELGTQLNELDSLDAIGDENAITYKTRI 273 Query: 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 S V+ A + + ++ SY + + +Q +S+ Sbjct: 274 SNVQDVDWTQAATEYALRQVSLQASYKVFSDMQGMSL 310 >gi|284801036|ref|YP_003412901.1| flagellar hook-associated protein FlgL [Listeria monocytogenes 08-5578] gi|284994178|ref|YP_003415946.1| flagellar hook-associated protein FlgL [Listeria monocytogenes 08-5923] gi|284056598|gb|ADB67539.1| flagellar hook-associated protein FlgL [Listeria monocytogenes 08-5578] gi|284059645|gb|ADB70584.1| flagellar hook-associated protein FlgL [Listeria monocytogenes 08-5923] Length = 291 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 64/150 (42%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ + ++ + K ++ +G+ + + IL + + + Sbjct: 3 ISTNQQASSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+T++ LSSM + + ++ + G +D + +A ++ + + Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKDNMSQSAEEIKGLLDVLI 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKD 155 + AN D+G+Y+FSG ++S KP T Sbjct: 123 SVANSEDDGRYVFSGSSTSVKPFTTDKTTG 152 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 62/196 (31%), Gaps = 15/196 (7%) Query: 176 SLLAGQHLEVSSMNAQQMTDFIKQLEDKFS--DDEYWANNWSNASDHNIKYRIKDTEGID 233 ++ + S +A+++ + L + DD + + S+ S E I Sbjct: 97 AINGTSDKDNMSQSAEEIKGLLDVLISVANSEDDGRYVFSGSSTSVKPFTTDKTTGEIIY 156 Query: 234 VSANVNMRGIRD--------IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTV----QQGL 281 N + R + + F + A K LS + + + Sbjct: 157 SGTTENKK-FRVTDTLEVEVFHDGSAMTDVFNNIQKIVDAMKTGDKDALSALQETNSKNI 215 Query: 282 SGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 I +G + + L +K S V A + L+ + + Sbjct: 216 EIITNSMTNIGGQKNGVTAYDNVLSSKIVDFSERKSNVEEVNMPEAVSNLNKTSIAYQAA 275 Query: 342 YMITTKLQKLSILNYL 357 + +QKLSILNY+ Sbjct: 276 LQSSVMVQKLSILNYM 291 >gi|54297189|ref|YP_123558.1| flagellar hook-associated protein FlgL [Legionella pneumophila str. Paris] gi|53750974|emb|CAH12385.1| flagellar hook-associated protein FlgL [Legionella pneumophila str. Paris] Length = 411 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 50/409 (12%), Positives = 116/409 (28%), Gaps = 57/409 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ I++R + +L ++ +G I +Q ++I Sbjct: 3 ISTNQIYQRGLDNLLTQQERLARLQDQQASGIRVRTPSDDPVASAQIELIKQRISNIELL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 ++ L + LS+ + + + A + + Sbjct: 63 QNNRQAADSALRLEEGILSNTVNSLHRLREIQIQSGNPSLSEEDRKTLAVEAQALLNQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN----------------GYFTKDSLAKKSFDQMLQG 168 +AN D G Y+FSG S +P++ SL D Sbjct: 123 DYANTKDSNGSYMFSGSKSLTQPVSLNLSGQYVYNGDNTQRFQAVTTSLLVAVNDTGDNV 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIK----- 223 F+ S + V+ + + + + ++ S N+ Sbjct: 183 FMRIPSGNGRFAIRETVTPNTGTASVSSGSVINEAAFVPDNYTMTFALNSQGNLVVMVSG 242 Query: 224 ----------------------YRIK-------------DTEGIDVSANVNMRGIRDIMF 248 I + +S N + Sbjct: 243 TLSGNVIPPSGLPDDAPLYQEGSAISFNGMEMVVSGLPKAGDSFSISPAKNESIFSTVQR 302 Query: 249 VAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNK 308 + + ++ A ++L+ + L I+ ++ LG + + Sbjct: 303 MINNLNKPYVSSVEKAATQTENNQLLAQIDSALGRILSVQSDLGARLNQLETAEKANNDY 362 Query: 309 NNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +I + K ++ +L+ + ++ + + T++Q LS+ N+L Sbjct: 363 LDISAATLKKLREIDPVAVATELNLQLVNLQAAQLSFTRIQGLSLFNFL 411 >gi|291276907|ref|YP_003516679.1| flagellar hook-associated protein 3 [Helicobacter mustelae 12198] gi|290964101|emb|CBG39945.1| flagellar hook-associated protein 3 [Helicobacter mustelae 12198] Length = 829 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 49/149 (32%), Gaps = 3/149 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T + +MN L + + ++ +G +G Q + L+ N Sbjct: 1 MRITFGTKY---NQMNYHQNTLQDKLNETNNKIASGLKIKHGYQDSSVYNQDLKLGYLSN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +++ + + + LS M K + ++ A L+ Sbjct: 58 TLSQGIDVAKSAHTKTLNADKTLSEMSKALVQFKTKMIQAANNVHSETSREAIALDLKAI 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLN 149 + AN + G+Y+F G P + Sbjct: 118 KNHIINMANTSIGGEYIFGGSKVDRPPFD 146 Score = 43.5 bits (101), Expect = 0.050, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 8/103 (7%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 + + RN+ + ++ + LS IE+ VL S I + +N I+ T I Sbjct: 731 EGYSPDMRNIGIQNGITVLDH-LSDHIEKMIVLNGSHSRI---LDDIVQRNEILKTQIES 786 Query: 319 S----IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 IGV+ + + S L T+K+ ++S++NYL Sbjct: 787 QKAENIGVDIAETYNKFSNLNTNYNAVLSSTSKINQMSLVNYL 829 >gi|328958294|ref|YP_004375680.1| flagellar hook-associated protein FlgL [Carnobacterium sp. 17-4] gi|328674618|gb|AEB30664.1| flagellar hook-associated protein FlgL [Carnobacterium sp. 17-4] Length = 299 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 97/317 (30%), Gaps = 62/317 (19%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 +V+ IL+ + + + + + + LSS K +Q + + G + Sbjct: 38 KVSKILDLNNSIIQNDQYKKTINDAIQWTNVQDSALSSATKSLQRIKTLIQYSANGTLSS 97 Query: 108 NKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ 167 N + + V N G+Y+F+G N++EKP S D + Sbjct: 98 EDRQANKAEIESEIQGVVDAFNTNFGGRYVFAGKNTTEKPFE---------VTSVDGEIT 148 Query: 168 GFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIK 227 G + + + N+ I Sbjct: 149 GI-----------------------------------------TYSGTAEGNGNLSREIA 167 Query: 228 DTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVL-------TKKMLSTVQQG 280 VS +N G R+ M L +L Q Sbjct: 168 PG----VSVELNTDG-RNFMNAQNADGSDDLGTFFSEVLTALDEDDTGKLSSLLDRADQE 222 Query: 281 LSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEM 340 + ++ R+ G +N ++ + T +S++ ++ + Q + + + Sbjct: 223 IENVVSNRSKTGSIFNRLNATLERNDSEKLNLKTMLSENQDIDLAEKYMQFTMEKSAYQA 282 Query: 341 SYMITTKLQKLSILNYL 357 S + T++ + SIL+YL Sbjct: 283 SLSMGTQILQTSILDYL 299 >gi|161503728|ref|YP_001570840.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865075|gb|ABX21698.1| hypothetical protein SARI_01813 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 317 Score = 55.9 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 112/349 (32%), Gaps = 40/349 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++E+ + +KL E+M +G+ + + Q + ++ Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSSGKRVTNPSDDPIAASQAVVLSQAQAQNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S ++ LS + +Q +V G ++ A L+ + + Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F+G + P + +K+ Q + Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGNYHGGEKNVTQ------------QVDSARTM 170 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V Q+ + + D N D I ++ N Sbjct: 171 VIGHTGAQIFNSLTSNAVPEPDGTDSEKNLFVMLDTAIAA-------LNTPVEGND---- 219 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + K ++ L+ ++ RA LG ++ Sbjct: 220 ----------------VEKEKAAAAIDKTSRGLKNSLNNVLTVRAELGTQLGELSTLDAL 263 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ ++ + ++ SY T +Q +S+ Sbjct: 264 GSDRALGQKLQMSNLVDVDWNSVISSYVMQQAALQASYKTFTDMQGMSL 312 >gi|283780144|ref|YP_003370899.1| flagellin domain-containing protein [Pirellula staleyi DSM 6068] gi|283438597|gb|ADB17039.1| flagellin domain protein [Pirellula staleyi DSM 6068] Length = 1003 Score = 55.9 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 52/147 (35%) Query: 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHI 62 TT S+ R+ + ++L ++ TG+ + + +Q Sbjct: 9 TTRTSSILAQTRLTAQLQADQLSILRLQSQISTGRRIALPSEDAPASQRAIHLQQLLELK 68 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 A+ L + L + + ++++ + + + + + A + + E Sbjct: 69 AQALVNLDTSQSYLDATDSAIANVSSTLNQIRSTALGVANTTSSETTRAAAAAEVSRAIE 128 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPLN 149 V AN G+YLF+G ++ P Sbjct: 129 QLVDVANQNFRGRYLFAGSKTTTVPFT 155 Score = 44.7 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 109/325 (33%), Gaps = 15/325 (4%) Query: 42 GLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILL 101 G+ L + + + I + + R++ + + + ++ L Sbjct: 685 GVALDIDIDGAVTVGDVIDRINNHALNTG--SGRVTAALNRVGNGIELTASQSSSPGTLS 742 Query: 102 EGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL-FSGINSSEKPLNGYFTKDSLAKK 160 K ++ + G++ +S T T L F+G NS + SL+ Sbjct: 743 ITKAFQSEAAWDLGLIPTGEQSITTSTAATVASARLDFAGANSDLL-VTAGIAGSSLSGV 801 Query: 161 SFDQMLQGFLEENSKSLLAGQ-----HLEVSSMNAQQMTDFIK---QLEDKFSDDEYWAN 212 + + + + + AG L+ S+ +A + D I N Sbjct: 802 AIRFVDSAVGDVATATYDAGTRELTIALDASATSATTIRDAINLEGTFSAALDATSDPTN 861 Query: 213 NWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKK 272 + S I +V N + + N D A + Sbjct: 862 DGSGVIGTTGVVGITSGGTAEVLTGANTYHQEVQGVFNTLIQLRDAINNFDLAS---IDR 918 Query: 273 MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLS 332 L ++ L I RA +G + ++ R L+++ + +SK I V+ A ++L+ Sbjct: 919 SLESLDVDLDRINFGRAEIGARGQALDLLRTRLEDEEVTLKDSLSKEIEVDITQAISELA 978 Query: 333 TLINKIEMSYMITTKLQKLSILNYL 357 +E S + L + ++LNYL Sbjct: 979 ARQASLEASMQLMATLFQTTLLNYL 1003 >gi|153825353|ref|ZP_01978020.1| flagellar hook-associated protein FlgL [Vibrio cholerae MZO-2] gi|149741037|gb|EDM55106.1| flagellar hook-associated protein FlgL [Vibrio cholerae MZO-2] Length = 397 Score = 55.9 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 54/407 (13%), Positives = 126/407 (30%), Gaps = 69/407 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G+ SD L I Q++ Sbjct: 5 ISSFHNYQAVQNDIRRQESKVFNNQAQLASGKKLLSASDNPLA----THYIQNVGQQEEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + L + LV RL + +S+ ++ ++ ++ G A +L++ Sbjct: 61 LRQYLDAIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMA 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL------------NGYF--------------TK 154 +F+ AN+ D G Y+F+G +P + Y Sbjct: 121 NNFINLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYAGDDYQRKMKISNSLEIPFNNP 180 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS-----SMNAQQMTDFIKQLEDKFSDDEY 209 S + + + LE + A F+ E K + Sbjct: 181 GSKVFMEIPNPFGSYEPNYALQEGSELLLERAVNLNPDDTASYRVTFVDMPEGK--NGYQ 238 Query: 210 WANNWSNAS---------------DHNIKYRIKDTEGID----VSANVNMRGIRDIMFVA 250 N S + +K +I + I+ + +V RD + A Sbjct: 239 LERNGSVVQAGEFDAKTGIQFEELNIQVKGQISKGDAIELRPRTTFSVFDT-FRDAIRYA 297 Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 +++D + +++ + + R +G ++ + ++ Sbjct: 298 -------EGSVSDASNTAKLHQLVEEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKI 350 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + S ++ A + + +E S K + L++ NY+ Sbjct: 351 SLAKSKSTFEDLDYAEAVIEFNENSRALEASQKAFGKTKDLTLFNYI 397 >gi|15606765|ref|NP_214145.1| flagellar hook associated protein FlgL [Aquifex aeolicus VF5] gi|2983978|gb|AAC07524.1| flagellar hook associated protein FlgL [Aquifex aeolicus VF5] Length = 422 Score = 55.9 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 52/408 (12%), Positives = 137/408 (33%), Gaps = 74/408 (18%) Query: 21 ELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQ 80 ++ K+ + E+V+G+ A IL + E + +++ + LS + Sbjct: 18 KIRKNVEDKYLEIVSGKKIQNPSDDPASTNQILNLKTELSKLSQFSRNRLFADTVLSYAD 77 Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSG 140 L+ ++ ++ + ++ L ++ A ++ + + AN Y+FSG Sbjct: 78 TLLAGIEDRLKSLYSKVIQLSNQVHTPDQLKAAAKEFEEALKLLLNTANEKVGNNYIFSG 137 Query: 141 INSSEKPLN-------------------GYFTKDSLAKKSFDQMLQGF------------ 169 + KP + GY + L + + G Sbjct: 138 NALTTKPFDENTLTYNGGNAEFEILIDEGYKSPVILNGGNIFDGIGGIGETYTVYEIEIT 197 Query: 170 -LEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKD 228 ++ + G ++ + + + I++L++ F D SD R++ Sbjct: 198 GFDDTPDNDDTGFRVDSIEIRGDNLDEIIQKLKENFGDSMN--IYLYEKSDGTPIIRLEA 255 Query: 229 TEGIDVSANVNMRGIRDIMFVAVIGTE------------------------FLSKNLTDG 264 V N+N R+I +++ F +++ Sbjct: 256 NRDFTV-TNINNTNPREIDTNSLLINRWNATRNIFETIKFIADELSEGRLLFSGPLISED 314 Query: 265 ARNVLT---------------KKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKN 309 + + + + ++Q + II RA +G K + E+ + +++ Sbjct: 315 SNDYFSNNRPDYQVISKPFNKSTEVKLMEQSVERIINFRAKIGSILKELRNEQNYQEDRK 374 Query: 310 NIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +++ S++ + + ++ + + + +SIL+Y+ Sbjct: 375 LVLEKQKSEAEDADLAKSISEYERYRLAYDAIMKLFVNHKNMSILDYI 422 >gi|148256816|ref|YP_001241401.1| hypothetical protein BBta_5535 [Bradyrhizobium sp. BTAi1] gi|146408989|gb|ABQ37495.1| hypothetical protein BBta_5535 [Bradyrhizobium sp. BTAi1] Length = 623 Score = 55.9 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 85/270 (31%), Gaps = 12/270 (4%) Query: 93 MVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYF 152 V + N IN + S + + T + + G+ + F Sbjct: 361 TVNGQTLTFVASGANGNNQINVTDSVQTLLSKIDALSGTSKPSTVSGGVITLRTDDAASF 420 Query: 153 TKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN 212 + S +F GF + + + +A + + + ++ + Sbjct: 421 SVSSSNAGAF--AALGFSGTVTAATPPLRVSGSPLGSATSLVNGSATTVNWYTGNSGPGT 478 Query: 213 NWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKK 272 S++ RI + I A N IR+++ + + A + Sbjct: 479 ARSSS-----TIRIDTAQSIQFGAQANELAIRNLVQQTAVYAAVNTPPAATNAGPQIAAL 533 Query: 273 MLSTVQQ-----GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 G I + + ++ + + + + + ++ G+ Q+ Sbjct: 534 SQRIAANLTPQLGQQSISDIQTDFANAQTTMKDATARQTQAKAAMQSLVDQTEGISQNEV 593 Query: 328 HAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +Q+ L ++ SY T L +LS++ +L Sbjct: 594 ASQILQLQTNLQASYQTTAMLAQLSLVKFL 623 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 22/188 (11%), Positives = 60/188 (31%), Gaps = 4/188 (2%) Query: 5 GISTSSIFERMNILTKE-LNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 IS+ + + L+ + L ++ +G ++ +G + + ++I+ Sbjct: 2 SISSINYGSSLLGLSVRNITSQLADLSTQLSSGTKANNYAGMGPDEGFAIAARAQLSNIS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + + V + L S+ KI + + T + + + + Sbjct: 62 AFSLTMTHVNTVIGAVNTSLQSLSKIGGQVQSGASATPQNLTSSGQ-TTGQQTASSNLSA 120 Query: 124 FVTFANMTDEGQYLFSGINSSEKPL--NGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 V N +++FSG + L + + Q++ + + G+ Sbjct: 121 IVGILNTQVGDRFIFSGSATDRPALASADDILNGTNTQAGLKQVIAERRQADLGLNGLGR 180 Query: 182 HLEVSSMN 189 +S Sbjct: 181 LNLSASAT 188 >gi|296102901|ref|YP_003613047.1| flagellar hook-associated protein FlgL [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057360|gb|ADF62098.1| flagellar hook-associated protein FlgL [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 317 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 107/353 (30%), Gaps = 48/353 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++++ + + E+M TG+ + + + Q ++ ++ Sbjct: 3 ISTQMMYDQNMRGITDSQSKWLSYGEQMSTGKRVNRPSDDPIAASQAVVLSQSQSQNSQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S LS + + LV G ++ A L+ + + Sbjct: 63 ALARTFATQKVSLEDNVLSQVNAAITSAKEKLVNAGNGTLSDDDRLSLASDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 AN D G+Y+F+G + P + Y + D + Sbjct: 123 NLANSADGNGRYIFAGYKTEAPPFDSVTGDYNGGTQAISQQVDTARNMVISH-------- 174 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 QQ+ + I + Y N D I Sbjct: 175 --------TGQQIFESITSNAKELPGGGYGETNMFKILDSAI------------------ 208 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 + + + + +N + + ++ A +G + + Sbjct: 209 ---------SALKVPVDNDSAAAEVQNKAISDAQIGITNTQNNVLTVVADVGTKMNELEK 259 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ ++A + ++ SY + +Q +S+ Sbjct: 260 LDNLGDDRALGQTQQMSDLVDVDWNSAISSYIMQQAALQASYKAFSDMQGMSL 312 >gi|332533168|ref|ZP_08409037.1| flagellar hook-associated protein FlgL [Pseudoalteromonas haloplanktis ANT/505] gi|332037450|gb|EGI73904.1| flagellar hook-associated protein FlgL [Pseudoalteromonas haloplanktis ANT/505] Length = 406 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 54/398 (13%), Positives = 114/398 (28%), Gaps = 66/398 (16%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSN-SLVTKRLS 77 E + + E++ T + S +K E+ N ++++ RL+ Sbjct: 16 ILENQQGVSRAQEQVNTQKRI-LSTSDDPSAMSQASLYSDKIQANEQYEKNITMLSSRLT 74 Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANM-TDEGQY 136 + L +++ ++ + G + A L+ + + N T++G+Y Sbjct: 75 NEETVLDNIKSSLERAHTLTIQAGNGAYSDIDREGIAEELKSIQSTVLDLMNAKTEDGKY 134 Query: 137 LFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGF--------------------------- 169 LFSG P Y + + + + DQ L Sbjct: 135 LFSGYQ-DNTPAYSYNSANQKYEYAGDQGLHKIKIAEGIDIKSSDNGFDVFEKVQARLNV 193 Query: 170 LEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDT 229 + +V Q F D N + Y ++ Sbjct: 194 SSNDGVVSGGVLDSKVYVKEQGQFDSFHSAEYDP--SGANNTYNVITTAGSPGTYTVEQG 251 Query: 230 EGI----------------DVSANVNMRGIRDIMFV-----------AVIGTEFLSKNLT 262 + ++S + G D + + T +L Sbjct: 252 GNVLASGDLSDGLVKFNGLEISISPVATGQVDFTLGVPQKENVLNTMSNLITGLKDISLD 311 Query: 263 DGARNVLTKKMLSTVQQGLSGIIEQRAVLG---ISEKNINEERVFLQNKNNIIDTYISKS 319 A + L + G + + +A LG + I++ L N Sbjct: 312 QDAFEQVIADGLLQLDNGRNKVSLTQAGLGGRINAADKISQSNAELDINNKAARA---DL 368 Query: 320 IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ A +L+ ++ S +L LS+ +YL Sbjct: 369 VELDMAEAITELTKQETALQASQATFGRLANLSLFDYL 406 >gi|307609984|emb|CBW99513.1| flagellar hook-associated protein FlgL [Legionella pneumophila 130b] Length = 411 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 50/409 (12%), Positives = 116/409 (28%), Gaps = 57/409 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ I++R + +L ++ +G I +Q ++I Sbjct: 3 ISTNQIYQRGLDNLLTQQERLSRLQDQQASGIRVRTPSDDPVASAQIELIKQRISNIELL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 ++ L + LS+ + + + A + + Sbjct: 63 QNNRQAADSALRLEEGILSNTVNSLHRLREIQIQSGNPSLSEEDRKTLAVEAQALLNQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN----------------GYFTKDSLAKKSFDQMLQG 168 +AN D G Y+FSG S +P++ SL D Sbjct: 123 DYANTKDSNGSYMFSGSKSLTQPVSLNLSGQYVYNGDNTQRFQAVTTSLLVAVNDTGDNV 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIK----- 223 F+ S + V+ + + + + ++ S N+ Sbjct: 183 FMRIPSGNGRFAIRETVTPNTGTASVSSGSVINEAAFVPDNYTMTFALNSQGNLVVMVSG 242 Query: 224 ----------------------YRIK-------------DTEGIDVSANVNMRGIRDIMF 248 I + +S N + Sbjct: 243 TLSGNVIPPSGLPDDAPLYQEGSAISFNGMEMVVSGLPKAGDSFSISPAKNESIFSTVQR 302 Query: 249 VAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNK 308 + + ++ A ++L+ + L I+ ++ LG + + Sbjct: 303 MINNLNKPYVSSVEKAATQTENNQLLAQIDSALGCILSVQSDLGARLNQLETAEKANNDY 362 Query: 309 NNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +I + K ++ +L+ + ++ + + T++Q LS+ N+L Sbjct: 363 LDISAATLKKLREIDPVAVATELNLQLVNLQAAQLSFTRIQGLSLFNFL 411 >gi|146293683|ref|YP_001184107.1| flagellar hook-associated protein FlgL [Shewanella putrefaciens CN-32] gi|145565373|gb|ABP76308.1| flagellar hook-associated protein 3 [Shewanella putrefaciens CN-32] Length = 403 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 53/408 (12%), Positives = 137/408 (33%), Gaps = 63/408 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSS-----DYGLQLGARVTSILEWEQEKN 60 +S++ IF + + + K+ E++ +G+ D LG Q Sbjct: 3 LSSAQIFNQSITSVLQKQTATSKILEQLSSGKKVNTAGDDPVAALGID-----NLNQRNA 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + T RL+ +++ L S + + + ++ + G +++ + A ++ S Sbjct: 58 LVDQFMKNIDYATNRLAVTESKLGSAENLASSIREQVMRAVNGTLADSERQMIADEMKGS 117 Query: 121 YESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 E ++ AN D G Y+FSG ++ ++P + S D +Q L ++ +L Sbjct: 118 LEELLSIANSKDESGNYMFSGYSTDKEPFAFDNSTPPKIVYSGDSGIQNSLVQSGVALGT 177 Query: 180 GQHLEVSSM--------------------------------------------------N 189 + + M Sbjct: 178 NVPGDSAFMKAPNGLGDYSVNYLASQQGEFSVKTAKIADASTYLADTYTFNFIDNGLGGT 237 Query: 190 AQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFV 249 Q+ D ++ + N + + + + + + I Sbjct: 238 NLQVLDSANNPVANIANFDATTPVSFNGIEVKVSGKPSAGDSFTMEPQAEVSIFDTISSA 297 Query: 250 AVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKN 309 + + S N G ++L+ + G++ I R+V G + K + + + Sbjct: 298 IALIEDPNSANTPQG--RAQLAQILNNIDSGVNQISSARSVAGNNLKAVESYKETHTEEK 355 Query: 310 NIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +S+ ++ +A + + + +K+ +S+ +Y+ Sbjct: 356 VVNTSALSRLEDLDYASAITEFEKQQLALNAVSSVFSKVGSVSLFDYI 403 >gi|153947262|ref|YP_001399641.1| flagellar hook-associated protein FlgL [Yersinia pseudotuberculosis IP 31758] gi|152958757|gb|ABS46218.1| flagellar hook-associated protein 3 [Yersinia pseudotuberculosis IP 31758] Length = 305 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 116/354 (32%), Gaps = 57/354 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++ MN + ++ K++++M+T Q + T +L+ +E+ +I + Sbjct: 3 ISTPTMSSAMNKFITQRHESLDKINKQMMTQQRITLPSEDPIASTRLLQINREQANIKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++ L+ H+S++ + + L+ + N A + E+ V Sbjct: 63 TGNIDGLSNSLTHQVGHVSAINTQLVAIKDRLLSISNDVKSNKDISGVADEMNYMLEAVV 122 Query: 126 TFANM-TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N EG+YLF+G S+ KP+ ++ NSK+ G Sbjct: 123 AELNAKNSEGRYLFAGTASNTKPITFDRNNNTYT-----------FVGNSKNRQTGVGEG 171 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V + + + Sbjct: 172 VKITENVHLQSGFTDVNGDLAT-------------------------------------- 193 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN---INEE 301 + + + + L + +M+ + + LGI + + + + Sbjct: 194 -LNKLKKLCDDIKQNTLPSTSHTTAINEMMGLIDSASDHMGVTLTELGIRQTHGKLLQKN 252 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ N I +G++ ++ +L L+ +Y ++ LS+ N Sbjct: 253 HEEMELSNITIK---ENLVGLDLAESYMELMNLMAVTNANYTTFKQINSLSLFN 303 >gi|317130314|ref|YP_004096596.1| flagellar hook-associated protein 3 [Bacillus cellulosilyticus DSM 2522] gi|315475262|gb|ADU31865.1| flagellar hook-associated protein 3 [Bacillus cellulosilyticus DSM 2522] Length = 394 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 41/395 (10%), Positives = 123/395 (31%), Gaps = 47/395 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ S + + + + ++ TG+ Q + + + + + Sbjct: 3 VTQSMLTNSSLRHLSQSYQTLHDIQNQLATGKKISRASQDPVIAMNGMRYRTQVVETEQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + V + + A L + + + V ++ + + + E Sbjct: 63 NRNLTEVYNWMENADATLDQVTSTMHRIRELAVQASNDTYESTQRANISKEIEQLREHLQ 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 + AN +Y+F+G N++ PL+ + ++ + ++ L N + A V Sbjct: 123 SLANTKANNKYIFNGTNTTNAPLD--ADQMNVGFNAIEEALADLP--NFNADEAVPFTHV 178 Query: 186 SSMNAQQMTDFIKQLEDKFSDD-EYWANNWSNASDHNIKYRI---------KDTEGID-- 233 + N+ + K + D + + A D E + Sbjct: 179 LTHNSGRYELVEKNDDGYIFQDVNNPNKSITVAVDGEGNPESFTHAHTYVNNAGETVTDT 238 Query: 234 -------------VSANVNMRGIR-DIMFVAVIGTEFLSKNL-----------------T 262 S + N + + +++ + T N+ Sbjct: 239 KDLKERQFVVSRLDSVSTNTQKVEIELLKGVNVATNINPSNVFSTDFFGDIYQLEKALND 298 Query: 263 DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGV 322 A +++++ + + ++ +RA LG + ++ + I +S + Sbjct: 299 PAATGKELEELIANFDRQIDKVVNERAELGARYNRVEMIDDRMKEQEVIARRILSNNEDA 358 Query: 323 EQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + L + N + ++ + +++++L Sbjct: 359 DIEKVITNLLSSENVHRAALSSMGRIMQPTLMDFL 393 >gi|169826734|ref|YP_001696892.1| flagellar hook-associated protein 3 [Lysinibacillus sphaericus C3-41] gi|168991222|gb|ACA38762.1| Flagellar hook-associated protein 3 (HAP3) [Lysinibacillus sphaericus C3-41] Length = 300 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 34/355 (9%), Positives = 110/355 (30%), Gaps = 59/355 (16%) Query: 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHI 62 T + +S++ +NI + KL +++ +G + + ++ + Sbjct: 4 TQSMLSSNMLRNLNISYGK----MSKLQDQINSGSKITRPSDDPVIAVKGMGYRRDLAKV 59 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + + + L ++ L+ + + ++ + ++ + + + Sbjct: 60 EQYTRNTITASSWLDSTDESLNQVGEQMKRVRELVIQAATDSNTSEDRDKIKKEIDQIRQ 119 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 N G Y+FSG ++E G + ++S + ++ + + Sbjct: 120 QLQDVGNTNIGGSYIFSGTRTNEPLFIGGAINPNTNQESVKVEIYDGIQLSVNTPGKDLF 179 Query: 183 LEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG 242 + M + ++D + K E I Sbjct: 180 NNIDDMMGK-ISDLLGDP-------------------------TKTGEEI---------- 203 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 A + S D + + ++E +A +G + + Sbjct: 204 -------ASMLGGVSSSTTNDD------------ITAMHNKVLEAQADIGARQNRVEMME 244 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L + + + + V+ A ++ T + + + + +K+ + ++++++ Sbjct: 245 NRLGVREVNVTKQLRDNESVDYAKAITEMVTHESIHQAALSVGSKIIQQTLVDFI 299 >gi|325474916|gb|EGC78102.1| flagellar hook-associated protein 3 [Treponema denticola F0402] Length = 415 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 47/403 (11%), Positives = 115/403 (28%), Gaps = 64/403 (15%) Query: 14 RMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVT 73 M L+ + ++ + Q D + G + ++ + + + Sbjct: 17 SMRNQESRLHNLNNQIQSQRRINQLRDDPVSAGH----SVRYKSYLARLERFEKNTKTLR 72 Query: 74 KRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFAN-MTD 132 + +++ ++++ ++VQ + V G + A + + V N + Sbjct: 73 DQYMSAETYMNNSLQVVQRLRELSVQGANGTYTPDDLKDMAAEADELLKELVQNGNAVNS 132 Query: 133 EGQYLFSGINSSEKP----LNGYFTKDSLAKKSF-----------DQMLQGFLEENSKSL 177 +G +FSG S +P + S + F+ + Sbjct: 133 DGVRVFSGTKSFTEPFETVMGDVDGAGSALITQVRYNGTVDSKEVETDELSFMRADQAGN 192 Query: 178 LAGQHLEVSSMNAQQMTDFI---------KQLEDKFSDDEYWANNWSNASDHNIKYRIKD 228 ++ +F+ +E + S +D + Sbjct: 193 RVFWAERQILISETDARNFVIKEDTSIEVDGVEIPLIAGDNVYAIMSKINDSGAAVKASL 252 Query: 229 TEGIDVSANVNMRGIRDI----MFVAVIGTEFL-------------------SKNLTDGA 265 + I N+ R + + + +E +L D A Sbjct: 253 -DPITSGLNLTTTDARQLWLRDAEGSTVLSELGLIKAEQRPPYNLANSVRVSGGSLFDAA 311 Query: 266 -----------RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 + L K+L + +G+ + + A G + + + Sbjct: 312 IAVRDAFLSGDQEALGGKVLGGLDEGIHNLTTRMAETGSKYSRAEVILARIDTQTLNVTA 371 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S+ ++ A L + + S + +L + S+LNYL Sbjct: 372 AESREADLDITKAITDLKMFEHTHQASLSVLGRLYRDSLLNYL 414 >gi|307945686|ref|ZP_07661022.1| putative flagellin and related hook-associated protein [Roseibium sp. TrichSKD4] gi|307771559|gb|EFO30784.1| putative flagellin and related hook-associated protein [Roseibium sp. TrichSKD4] Length = 524 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 81/239 (33%), Gaps = 7/239 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M I TS + L + + ++ +G+ S LG LE Q+ N Sbjct: 1 MAIESIGTS--RSYLTKQLVSLKGNLTEKTSQLASGKVSQTYGGLGDNRLLDLELNQKVN 58 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 I+ + + V + + L ++ + D L + ++ + Sbjct: 59 RISSYQETITQVNLHIKSLNVTLERLEDLRLDTKSALDLNDYELQNDGQTRT-QATAEVL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFT--KDSLAKKSFDQMLQGFLEENSKSLL 178 ++ N G YL+ G ++ E P+ + + S + Q++ ++ N S Sbjct: 118 LHEAISLLNTEVAGYYLYGGTDAYENPVADVDSIMEGSGDRAGLKQVMNEYIAANLGSDK 177 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSD--DEYWANNWSNASDHNIKYRIKDTEGIDVS 235 G+ + + T I + ++ +NAS I D+ I+ + Sbjct: 178 LGRLEVPALVAPTASTITITEDGAHDFGLKLSSVTSDLANASITQPTGAIPDSLSIEFT 236 Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 36/284 (12%), Positives = 90/284 (31%), Gaps = 34/284 (11%) Query: 99 ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLA 158 L G T F + A + ++FV A+ + L + I + K + + Sbjct: 250 TLPPGHTKPVSFELAADTTGEGVDTFVIGADTDETAANLRAKILEKIEEQANTSLKAAAS 309 Query: 159 KKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNAS 218 + + DQ F + +++ + + + + + Sbjct: 310 EWAGDQFFDTFGGATPMRVDGPPFESATAL-----ISGASTTVEWYVGENTSTTD----A 360 Query: 219 DHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTE--------FLSKNLTDGARNVLT 270 + R+ D + A N +G+ D+M F + + +L Sbjct: 361 RRDKNARVDDNLNVSYGARANEKGLSDVMKSLATFVAADFSTDVAFTGSETPEEKKEMLA 420 Query: 271 KK-----------------MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 + ++ SGI++ + I+ + + + + Sbjct: 421 AQERIDKLHYGEFVQRFRSVVQPDVADQSGIVDISTEISIAFRTVQDTDSRHTQMKSTYS 480 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I + GV++ ++ L +E SY ++ + L++ +Y+ Sbjct: 481 ATIDEIEGVDKELLAVEILQLQTNLEASYRASSIVFNLNLADYI 524 >gi|222823826|ref|YP_002575400.1| flagellin family protein [Campylobacter lari RM2100] gi|222539048|gb|ACM64149.1| flagellin family protein [Campylobacter lari RM2100] Length = 744 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 39/97 (40%) Query: 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114 E E +I + + + + + ++ ++++ L A Sbjct: 52 LEYELANIGQVIQGTQSAMEMAKNTDTAIKNITELLEKFKTLLTKAASDGNSQTSREAIA 111 Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGY 151 L+ +S V AN + GQYLF+G N++ KP + + Sbjct: 112 KELKLIKDSIVNIANTSINGQYLFAGSNTATKPFDKF 148 >gi|15642189|ref|NP_231821.1| flagellar hook-associated protein FlgL [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121726564|ref|ZP_01679813.1| flagellar hook-associated protein FlgL [Vibrio cholerae V52] gi|147674282|ref|YP_001217707.1| flagellar hook-associated protein FlgL [Vibrio cholerae O395] gi|153213628|ref|ZP_01948901.1| flagellar hook-associated protein FlgL [Vibrio cholerae 1587] gi|153817065|ref|ZP_01969732.1| flagellar hook-associated protein FlgL [Vibrio cholerae NCTC 8457] gi|153820859|ref|ZP_01973526.1| flagellar hook-associated protein FlgL [Vibrio cholerae B33] gi|153829327|ref|ZP_01981994.1| flagellar hook-associated protein FlgL [Vibrio cholerae 623-39] gi|227082314|ref|YP_002810865.1| flagellar hook-associated protein FlgL [Vibrio cholerae M66-2] gi|229507733|ref|ZP_04397238.1| flagellar hook-associated protein FlgL [Vibrio cholerae BX 330286] gi|229512072|ref|ZP_04401551.1| flagellar hook-associated protein FlgL [Vibrio cholerae B33] gi|229513834|ref|ZP_04403296.1| flagellar hook-associated protein FlgL [Vibrio cholerae TMA 21] gi|229519208|ref|ZP_04408651.1| flagellar hook-associated protein FlgL [Vibrio cholerae RC9] gi|229522139|ref|ZP_04411556.1| flagellar hook-associated protein FlgL [Vibrio cholerae TM 11079-80] gi|229528805|ref|ZP_04418195.1| flagellar hook-associated protein FlgL [Vibrio cholerae 12129(1)] gi|229607237|ref|YP_002877885.1| flagellar hook-associated protein FlgL [Vibrio cholerae MJ-1236] gi|254286495|ref|ZP_04961452.1| flagellar hook-associated protein FlgL [Vibrio cholerae AM-19226] gi|254849319|ref|ZP_05238669.1| flagellar hook-associated protein FlgL [Vibrio cholerae MO10] gi|255747111|ref|ZP_05421056.1| flagellar hook-associated protein FlgL [Vibrio cholera CIRS 101] gi|262161345|ref|ZP_06030455.1| flagellar hook-associated protein FlgL [Vibrio cholerae INDRE 91/1] gi|262167784|ref|ZP_06035486.1| flagellar hook-associated protein FlgL [Vibrio cholerae RC27] gi|262191682|ref|ZP_06049858.1| flagellar hook-associated protein FlgL [Vibrio cholerae CT 5369-93] gi|298500432|ref|ZP_07010237.1| flagellar hook-associated protein 3 [Vibrio cholerae MAK 757] gi|9656745|gb|AAF95335.1| flagellar hook-associated protein FlgL [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121631017|gb|EAX63396.1| flagellar hook-associated protein FlgL [Vibrio cholerae V52] gi|124115827|gb|EAY34647.1| flagellar hook-associated protein FlgL [Vibrio cholerae 1587] gi|126512333|gb|EAZ74927.1| flagellar hook-associated protein FlgL [Vibrio cholerae NCTC 8457] gi|126521651|gb|EAZ78874.1| flagellar hook-associated protein FlgL [Vibrio cholerae B33] gi|146316165|gb|ABQ20704.1| flagellar hook-associated protein FlgL [Vibrio cholerae O395] gi|148875168|gb|EDL73303.1| flagellar hook-associated protein FlgL [Vibrio cholerae 623-39] gi|150423444|gb|EDN15388.1| flagellar hook-associated protein FlgL [Vibrio cholerae AM-19226] gi|227010202|gb|ACP06414.1| flagellar hook-associated protein FlgL [Vibrio cholerae M66-2] gi|227014086|gb|ACP10296.1| flagellar hook-associated protein FlgL [Vibrio cholerae O395] gi|229332579|gb|EEN98065.1| flagellar hook-associated protein FlgL [Vibrio cholerae 12129(1)] gi|229341064|gb|EEO06069.1| flagellar hook-associated protein FlgL [Vibrio cholerae TM 11079-80] gi|229343897|gb|EEO08872.1| flagellar hook-associated protein FlgL [Vibrio cholerae RC9] gi|229349015|gb|EEO13972.1| flagellar hook-associated protein FlgL [Vibrio cholerae TMA 21] gi|229352037|gb|EEO16978.1| flagellar hook-associated protein FlgL [Vibrio cholerae B33] gi|229355238|gb|EEO20159.1| flagellar hook-associated protein FlgL [Vibrio cholerae BX 330286] gi|229369892|gb|ACQ60315.1| flagellar hook-associated protein FlgL [Vibrio cholerae MJ-1236] gi|254845024|gb|EET23438.1| flagellar hook-associated protein FlgL [Vibrio cholerae MO10] gi|255735513|gb|EET90913.1| flagellar hook-associated protein FlgL [Vibrio cholera CIRS 101] gi|262023849|gb|EEY42548.1| flagellar hook-associated protein FlgL [Vibrio cholerae RC27] gi|262028656|gb|EEY47310.1| flagellar hook-associated protein FlgL [Vibrio cholerae INDRE 91/1] gi|262032421|gb|EEY50983.1| flagellar hook-associated protein FlgL [Vibrio cholerae CT 5369-93] gi|297541125|gb|EFH77179.1| flagellar hook-associated protein 3 [Vibrio cholerae MAK 757] Length = 397 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 54/407 (13%), Positives = 126/407 (30%), Gaps = 69/407 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G+ SD L I Q++ Sbjct: 5 ISSFHNYQAVQNDIRRQESKVFNNQAQLASGKKLLSASDNPLA----THYIQNVGQQEEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + L + LV RL + +S+ ++ ++ ++ G A +L++ Sbjct: 61 LRQYLDAIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMA 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL------------NGYF--------------TK 154 +F+ AN+ D G Y+F+G +P + Y Sbjct: 121 NNFINLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYAGDDYQRKMKISNSLEIPFNNP 180 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS-----SMNAQQMTDFIKQLEDKFSDDEY 209 S + + + LE + A F+ E K + Sbjct: 181 GSKVFMEIPNPFGSYEPNYALQEGSELLLERAVNLNPDDTASYRVTFVDMPEGK--NGYQ 238 Query: 210 WANNWSNAS---------------DHNIKYRIKDTEGID----VSANVNMRGIRDIMFVA 250 N S + +K +I + I+ + +V RD + A Sbjct: 239 LERNGSVVQAGEFDAKTGIQFEELNIQVKGQISKGDAIELTPRTTFSVFDT-FRDAIRYA 297 Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 +++D + +++ + + R +G ++ + ++ Sbjct: 298 -------EGSVSDASNTAKLHQLVEEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKI 350 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + S ++ A + + +E S K + L++ NY+ Sbjct: 351 SLAKSKSTFEDLDYAEAVIEFNENSRALEASQKAFGKTKDLTLFNYI 397 >gi|54294170|ref|YP_126585.1| flagellar hook-associated protein FlgL [Legionella pneumophila str. Lens] gi|53754002|emb|CAH15473.1| flagellar hook-associated protein FlgL [Legionella pneumophila str. Lens] Length = 411 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 50/409 (12%), Positives = 116/409 (28%), Gaps = 57/409 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ I++R + +L ++ +G I +Q ++I Sbjct: 3 ISTNQIYQRGLDNLLTQQERLSRLQDQQASGIRVRTPSDDPVASAQIELIKQRISNIELL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 ++ L + LS+ + + + A + + Sbjct: 63 QNNRQAADSALRLEEGILSNTVNSLHRLREIQIQSGNPSLSEEDRKTLAVEAQVLLNQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN----------------GYFTKDSLAKKSFDQMLQG 168 +AN D G Y+FSG S +P++ SL D Sbjct: 123 DYANTKDSNGSYMFSGSKSLTQPVSLNLSGQYVYNGDNTQRFQAVTTSLLVAVNDTGDNV 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIK----- 223 F+ S + V+ + + + + ++ S N+ Sbjct: 183 FMRIPSGNGRFAIRETVTPNTGTASVSSGSVINEAAFVPDNYTMTFALNSQGNLVVMVIG 242 Query: 224 ----------------------YRIK-------------DTEGIDVSANVNMRGIRDIMF 248 I + +S N + Sbjct: 243 TLSGNVIPPSGLPDDAPLYQEGSAISFNGMEMVVSGLPKAGDSFSISPAKNESIFSTVQR 302 Query: 249 VAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNK 308 + + ++ A ++L+ + L I+ ++ LG + + Sbjct: 303 MINNLNKPYVSSVEKAATQTENNQLLAQIDSALGHILSVQSDLGARLNQLETAEKANNDY 362 Query: 309 NNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +I + K ++ +L+ + ++ + + T++Q LS+ N+L Sbjct: 363 LDISAATLKKLREIDPVAVATELNLQLVNLQAAQLSFTRIQGLSLFNFL 411 >gi|255018231|ref|ZP_05290357.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL F2-515] Length = 226 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 64/150 (42%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ + ++ + K ++ +G+ + + IL + + + Sbjct: 4 ISTNQQASSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 63 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+T++ LSSM + + ++ + G +D + +A ++ + + Sbjct: 64 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKDNMSQSAEEIKGLLDVLI 123 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKD 155 + AN D+G+Y+FSG ++S KP T Sbjct: 124 SVANSEDDGRYVFSGSSTSVKPFTTDKTTG 153 >gi|126668565|ref|ZP_01739519.1| Flagellin and related hook-associated protein [Marinobacter sp. ELB17] gi|126626970|gb|EAZ97613.1| Flagellin and related hook-associated protein [Marinobacter sp. ELB17] Length = 402 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 1/136 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS+ IF ++L+ K E++ TG+ + IL+ +QE I Sbjct: 4 ISSQQIFSGGINRLQDLSAQLNKTDEQIATGKRVNRPSDDPVAAARILKLDQEVKRIETY 63 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L RL ++ +SS I+Q + V G + + + + + Sbjct: 64 ERNAQLANNRLGQEESAISSSLDILQRVRELTVQAGNGSLSASDRLSISSEMNERLQQLA 123 Query: 126 TFANMTD-EGQYLFSG 140 AN D G+Y+FSG Sbjct: 124 QTANTQDASGEYIFSG 139 >gi|15895479|ref|NP_348828.1| flagellin [Clostridium acetobutylicum ATCC 824] gi|15025208|gb|AAK80168.1|AE007721_8 Flagellin [Clostridium acetobutylicum ATCC 824] gi|325509626|gb|ADZ21262.1| Flagellin [Clostridium acetobutylicum EA 2018] Length = 425 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 52/422 (12%), Positives = 122/422 (28%), Gaps = 70/422 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + ++ + ++ +G+ T ++ + + ++ Sbjct: 3 ITNRMLTDTFLTDMNTNLQNMRDIQSQLTSGKKIRKPSDNPYVATKSMQLNTDISINSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L+ + L+ IVQ + L+ G ++ L F Sbjct: 63 NTNINNTIYWLNQTDTALNQAGNIVQRIKELLISAGNGGYTQDQRDSIKAELNQRISEFS 122 Query: 126 TFANMTDEGQYLFSGINSSEKPL---------------NGYFTKDSLAKKSFDQMLQGFL 170 N + GQYLF G +EKPL N + S L Sbjct: 123 NVINSSFSGQYLFGGTRGNEKPLDIINSASGNKYLMYSNQSIDLPVASGASNVASLASGC 182 Query: 171 EENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNAS------------ 218 + L +G +++ N + + + + K + S S Sbjct: 183 GDLDIRLGSGSTVQLQINNGDSIQNILDGINSKIASSSSLKGKISAISYVKGNQTYIRVT 242 Query: 219 ----------------------------------DHNIKYRIKDTEGIDVSANVNM---- 240 ++ I S N Sbjct: 243 ALSDKDITITSGTNITALSSFKNQYIGVDKINQISKDLSVEISQGVLTQYSVNATEIMNY 302 Query: 241 -----RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISE 295 GI + + ++ ++ ++ + L K V L I+ R+ +G S+ Sbjct: 303 KGVSASGIEKSYDLRQVFSDIVTDLSSNSGVSNLNTKDAEAVDALLENILAIRSTVGASQ 362 Query: 296 KNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ + Q N + +S + + + + L S + K+ + ++++ Sbjct: 363 NRMDSAQKNNQENNYNMTLILSNTEDTDITESTMNYAALQTVYLASLQTSAKIIQPTLMD 422 Query: 356 YL 357 Y+ Sbjct: 423 YM 424 >gi|284007168|emb|CBA72452.1| flagellar hook-associated protein FlgL [Arsenophonus nasoniae] Length = 313 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 43/359 (11%), Positives = 102/359 (28%), Gaps = 49/359 (13%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M TT +S+ + + ++ + TG+ A L+ Q + Sbjct: 1 MMTTRLSSQFMHYQKTNSMMYSQSQLADKYQRITTGKRLLQSADDPAAAAENLQINQTQT 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 +A+ + + ++ + + M+ + + + V + + +S Sbjct: 61 RLAQYKTARNFSQHQMQSQLQVVEKMEDLSRRIKQTFVAVSNQSIMSEDARQAYATELES 120 Query: 121 YES-FVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLL 178 +S V AN D G YLF+G + PL + S D + Q + ++ Sbjct: 121 LKSELVGLANSKDSSGSYLFAGYKTDTVPLVVGTNGVVNYQGSQDAIKQHIDADREVTVN 180 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 + + + + A + Sbjct: 181 FTAQQVLQTATGGDIFQSLDL-----------------AINTLKTPYQSANPQAQSILAA 223 Query: 239 NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 N S +Q + + + LG K + Sbjct: 224 N------------------------------IDSAHSDLQNTMKSLSTISSQLGSQLKEV 253 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ + ++ S+ + A+ ++ SY + +++ LS+ N L Sbjct: 254 EQLNSRSEDVSLLLKERQSQLTNTDMAAEIAEYYQEEAILQASYSLFAQMKDLSLFNLL 312 >gi|308050017|ref|YP_003913583.1| flagellar hook-associated protein 3 [Ferrimonas balearica DSM 9799] gi|307632207|gb|ADN76509.1| flagellar hook-associated protein 3 [Ferrimonas balearica DSM 9799] Length = 304 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 120/346 (34%), Gaps = 53/346 (15%) Query: 14 RMNILTKEL-NKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLV 72 R+N+ + ++ + K+ ++M +G+ + L ++E+ + + + + S + Sbjct: 10 RLNLNSMQMNQANYGKVLQQMSSGKKLNVPSDDPLGAVQSLSLQREQASLNQYMTNISSL 69 Query: 73 TKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD 132 LS S++ L +M ++ + + G + A LR +S V N D Sbjct: 70 RMSLSRSESTLDNMNNVLYRVRDLSLQGGNGALTHEDRKGIAAELRVLQDSLVEHVNAKD 129 Query: 133 E-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQ 191 E G+Y++SG P+ S + + QG L + + G + + Sbjct: 130 EKGKYIYSGNEVDTPPV--------AQDASGNWVYQGDLSQRDVPVGEGNWIPGNDTAGA 181 Query: 192 QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAV 251 F ED F+ W + Sbjct: 182 ---IFFAGGEDIFNGLSEWID--------------------------------------- 199 Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 E + D A + K + T+ ++ I + LG ++ ++ Q+ Sbjct: 200 -VLEDPTLVPGDPAFDAAMDKAMRTIDNTMASIGQTMTELGGRQQGMDLLETAHQDIGMF 258 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I + ++ A L+T + ++ + K+ +LS+ N+L Sbjct: 259 NQELIGEIENLDYGEASLSLATYLMALQATQQSYVKINQLSLFNHL 304 >gi|27380963|ref|NP_772492.1| hypothetical protein bll5852 [Bradyrhizobium japonicum USDA 110] gi|27354129|dbj|BAC51117.1| bll5852 [Bradyrhizobium japonicum USDA 110] Length = 627 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 36/277 (12%), Positives = 91/277 (32%), Gaps = 17/277 (6%) Query: 89 IVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSG---INSSE 145 + L + +N G + S + T + + G IN+ + Sbjct: 360 AGDTITVNGTTLTFVSSGATGNQLNVGDSIQTLMSKIDQITGTSKPSTIHGGSITINTDD 419 Query: 146 KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFS 205 + ++ A S + +A + + + Sbjct: 420 AATLNITSSNTGALGSLGFSTTPVTATQPPLRVGSSPAS----SATTLVNGSATTVKWYL 475 Query: 206 DDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKN---LT 262 ++ + S A R+ D+ + A + IR + + F + + Sbjct: 476 GNDGPGSPRSTA-----MARVDDSVTVQYGAQADEDAIRRQLQAIAVFGTFSTSPTGQYS 530 Query: 263 DGARNVLTKKMLSTVQQ--GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 G + L+ ++ + Q G I + + + +++ + + + T I ++ Sbjct: 531 GGQVSALSLRVTQALTQQPGQQRIEDIQTDIAMAQNTMKDASTRQTQAKAQLQTIIDQAE 590 Query: 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +++ L N ++ SY +T+KL +LS++ +L Sbjct: 591 SAPPDQVASEILALQNALQASYQVTSKLAQLSLVKFL 627 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 59/170 (34%), Gaps = 3/170 (1%) Query: 18 LTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLS 77 + +N+ L ++ TG+ S +G + + ++IA + + V ++ Sbjct: 16 QIRNINQQLTDLSTQLSTGKLSQNYSGMGTNEGFAIAGRAQLSNIAAYTDTITNVNVSIN 75 Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 + L S+ KI + + N + + + S V N +YL Sbjct: 76 LANTALQSLTKIRNTVQTGSANTAQDLNVNGQ-TVAQNTAAAQFGSMVGVLNTQTGNRYL 134 Query: 138 FSGINSSEKPLNGYFT--KDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 FSG + + + + + F ++ + + G+ ++ Sbjct: 135 FSGTAVNTQSVADAGDIINGTTTQAGFKAVMAERQAADLGATGMGRLVQT 184 >gi|289523317|ref|ZP_06440171.1| flagellar hook-associated protein 3 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503009|gb|EFD24173.1| flagellar hook-associated protein 3 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 882 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 8/127 (6%) Query: 26 SVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQA 81 +KL +M TG+ SD L +G ++ + + ++ LS + A Sbjct: 17 MLKLQRQMSTGKLHQKPSDDPLAVGRELSISTTIFENEQYLKNLDD----AMMWLSNTDA 72 Query: 82 HLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGI 141 L+ + ++ + + G + ++ A + E + AN + EG+YLFSG+ Sbjct: 73 ALNQITDVMHRIRELAIYAGNGTFEEAEYNAIADEIYQLQEELINTANFSVEGRYLFSGL 132 Query: 142 NSSEKPL 148 N+++KP Sbjct: 133 NATQKPF 139 Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 48/131 (36%), Gaps = 7/131 (5%) Query: 227 KDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIE 286 T + SAN+N ++ + L + L G ++ +L + + ++ Sbjct: 758 NQTITVRTSANINSTDFFGLL-------DDLVQALRQGDVEGISGNILPKIDDAIDDVLR 810 Query: 287 QRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITT 346 R G +K L+ N + SK + A + + + + S Sbjct: 811 VRTQSGALQKRYETSSSRLKQMNLNYNELYSKVSDTDLAEAATKFAMAQSVYQASLATIA 870 Query: 347 KLQKLSILNYL 357 ++ + +++++L Sbjct: 871 RIIQPTLVDFL 881 >gi|323495370|ref|ZP_08100447.1| flagellar hook-associated protein FlgL [Vibrio brasiliensis LMG 20546] gi|323310293|gb|EGA63480.1| flagellar hook-associated protein FlgL [Vibrio brasiliensis LMG 20546] Length = 397 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 48/397 (12%), Positives = 121/397 (30%), Gaps = 49/397 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G+ SD L I Q+K Sbjct: 5 ISSFHNYQSVQNDLRRSEAKVHHNQAQLASGKKLMKASDDPLA----THYIQNIGQQKEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + + +L RL + +S+ ++ + ++ ++ G + + Sbjct: 61 LRQFTDAITLTRNRLEHHEVIISNAEEFADEAKRTVMEMINGALSPEDRLAKRREIEEIS 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL------------NGYF--------------TK 154 +F+ N+ D G Y+F+G +P + Y Sbjct: 121 NNFLNLVNVQDESGNYIFAGTKPKNQPFFRDRNGDVVYAGDDYQRKMKISNSLEMPINDP 180 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS-SMNAQQMT----DFIKQLEDKFS---- 205 S D F + + + LE + +++ + F+ E K+ Sbjct: 181 GSKLFMEIDNPFGDFEPKYNLKDASELLLERAINIDPDDQSSYKVTFVDMPEGKYGYQLE 240 Query: 206 --DDEYWANNWSNASDHNIKY-RIKDTEGIDVSANVNMRGIRDIMFVAVI--GTEFLSKN 260 A+ + A + RI+ I + + R E + Sbjct: 241 RDGSVVKADTFDPAEGIQYEGVRIQVKGQITKGDEIELEPRRTFSVFETFQDAMELSRGS 300 Query: 261 LTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 ++D + ++ + + R +G ++ + + + S Sbjct: 301 VSDSSNTAQLHQITQEFHAAFIHLNKARTDVGARLNTLDIQEEQHDDFKMTLAKSKSNFE 360 Query: 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A + + ++ S K + L++ NY+ Sbjct: 361 DLDYAEAIIEFNENSRALQASQQAFGKTKDLTLFNYI 397 >gi|183179572|ref|ZP_02957783.1| flagellar hook-associated protein FlgL [Vibrio cholerae MZO-3] gi|183012983|gb|EDT88283.1| flagellar hook-associated protein FlgL [Vibrio cholerae MZO-3] Length = 397 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 53/407 (13%), Positives = 126/407 (30%), Gaps = 69/407 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G+ SD L I Q++ Sbjct: 5 ISSFHNYQAVQNDIRRQESKVFNNQAQLASGKKLLSASDNPLA----THYIQNVGQQEEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + L + LV RL + +++ ++ ++ ++ G A +L++ Sbjct: 61 LRQYLDAIVLVRNRLEHQEVIIANTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMA 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL------------NGYF--------------TK 154 +F+ AN+ D G Y+F+G +P + Y Sbjct: 121 NNFINLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYAGDDYQRKMKISNSLEIPFNNP 180 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS-----SMNAQQMTDFIKQLEDKFSDDEY 209 S + + + LE + A F+ E K + Sbjct: 181 GSKVFMEIPNPFGSYEPNYALQEGSELLLERAVNLNPDDTASYRVTFVDMPEGK--NGYQ 238 Query: 210 WANNWSNAS---------------DHNIKYRIKDTEGID----VSANVNMRGIRDIMFVA 250 N S + +K +I + I+ + +V RD + A Sbjct: 239 LERNGSVVQAGEFDAKTGIQFEELNIQVKGQISKGDAIELTPRTTFSVFDT-FRDAIRYA 297 Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 +++D + +++ + + R +G ++ + ++ Sbjct: 298 -------EGSVSDASNTAKLHQLVEEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKI 350 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + S ++ A + + +E S K + L++ NY+ Sbjct: 351 SLAKSKSTFEDLDYAEAVIEFNENSRALEASQKAFGKTKDLTLFNYI 397 >gi|320353946|ref|YP_004195285.1| flagellar hook-associated protein 3 [Desulfobulbus propionicus DSM 2032] gi|320122448|gb|ADW17994.1| flagellar hook-associated protein 3 [Desulfobulbus propionicus DSM 2032] Length = 292 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 100/311 (32%), Gaps = 63/311 (20%) Query: 47 ARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTD 106 + V SIL + + + V L+ ++ + S++ ++ V Sbjct: 45 SSVGSILGCRSDIVKGERYVENCKHVQDSLANAEISIDSIEGLMTRAKEIAVAGANDSLS 104 Query: 107 NNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQML 166 A + Y+ + AN G+Y+F+G N S + +++ Sbjct: 105 TADKATLADEISQLYQELLDLANTQISGKYIFAGYN-------DQTVPFSGSPVTYNG-- 155 Query: 167 QGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRI 226 + ++ ++ + F+ + N+ + Sbjct: 156 ---TGDQQMIEISPGTTVAKNITGDDL--FMSPI--------------------NLFTTL 190 Query: 227 KDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIE 286 +D + S + ML+ ++ + Sbjct: 191 EDLQTALTSGSSAD-----------------------------VSAMLTPLEAAAEQVRA 221 Query: 287 QRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITT 346 Q++ LG + +++ +N ++ T +S+ + A+++ + +E + +T Sbjct: 222 QQSALGNTSARMDDMISMHENALLLLKTTLSRHQDADLTEVLAEIAKMETSLEATMQVTA 281 Query: 347 KLQKLSILNYL 357 ++ LS+++YL Sbjct: 282 RVSSLSLMDYL 292 >gi|239628959|ref|ZP_04671990.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519105|gb|EEQ58971.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 327 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 36/352 (10%), Positives = 109/352 (30%), Gaps = 28/352 (7%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ S + N + + + ++ + + ++ + A + + E Sbjct: 3 ITESMMTTSYNKNLQRNISNLASSNLKLASQRQYNHVSEDPATASKAFAIRDQIARTEEH 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 ++ T L T+ +++ ++ I++++ G + + A L E + Sbjct: 63 INVVKNATGELETADSNILTLNSILENIYEKATKA-GGASSQDSMDAIAEELSGQMEELL 121 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N ++LFSG + P ++ L V Sbjct: 122 QTMNARYGDKFLFSGSANGTAPFT----------------------LDADGNLLFNGKSV 159 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + + + + + + D + + + +I + + + G+ + Sbjct: 160 DAYDKNDPDTYFSENKPVYLD-IGFGTYATGTNTAKTGIKISTSGVDVLGCGKDENGMPN 218 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 + + + + + LS +++ S I + +G EK + + L Sbjct: 219 --NLYSLIGQVRDQLKAGDKEGAM--DSLSQLKKKQSNISIATSEIGTREKMLERTQDRL 274 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + V+ T + ++ + + + SI +++ Sbjct: 275 ETSLVNLQKSQKDLEAVKVETEAVNNKSAETAWMITLQLGSSIIPPSIFDFM 326 >gi|226939367|ref|YP_002794440.1| FlgL [Laribacter hongkongensis HLHK9] gi|226714293|gb|ACO73431.1| FlgL [Laribacter hongkongensis HLHK9] Length = 311 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 113/353 (32%), Gaps = 45/353 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+S F + + +L+ ++ T + + IL+ Q ++ Sbjct: 3 ISTNSTFLQGSYGVSIQQSLMSQLNVQLSTLKRVNTPSDDPVAAARILDISQSDARNSQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 +++ L S+ L + I+ M V G + + + + S E V Sbjct: 63 INNTKAAESALEFSETSLDRISNIIIQMKEMSVQAGNGAASDENLKQMSKVFKASLEEMV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+FSG +S Y + + G + Sbjct: 123 AVANSTDASGKYVFSGTSSDTPA---YTMTGNWPVVTI--------------TYGGNDGQ 165 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 S + + I + + +A ++ Sbjct: 166 KSLAISDTRSIAISEPGSSIFGEG-------SADAGSL--------------------FE 198 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + +A + + G+ + ++ GL ++ +A +G Sbjct: 199 TMSRMAALLENGRTGTYPAGSYEQELTAIQGGLESGLQSVLTGQASVGSRRLEAQNAGNL 258 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + + S ++ A + L+ ++ S + +K+Q +S+ NY+ Sbjct: 259 GEDLSLVYAKTRSNLEDLDVPKAASDLAMAQMALQASQLSFSKVQGMSLFNYI 311 >gi|134300274|ref|YP_001113770.1| flagellar hook-associated protein 3 [Desulfotomaculum reducens MI-1] gi|134052974|gb|ABO50945.1| flagellar hook-associated protein 3 [Desulfotomaculum reducens MI-1] Length = 438 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 58/152 (38%), Gaps = 2/152 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS + + + + + K E+ TG++ + ++++ ++ + Sbjct: 4 VSTSLLGNNLRNYIQNNLQRAAKYQEQSSTGKTINRPSDSPSQISYLMSVNATLISNEQY 63 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ S + L +M K++QD G A + ++ V Sbjct: 64 SRNIKDGLAYLNQSDSALDTMGKLLQDAKVEANKGANGTLTPEDRNAIAEQIDRQIDAMV 123 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSL 157 AN G+YLF+G + + P Y DS Sbjct: 124 DMANSALGGKYLFAGRKNGQPPF--YRDPDSG 153 >gi|302391043|ref|YP_003826863.1| flagellar hook-associated protein 3 [Acetohalobium arabaticum DSM 5501] gi|302203120|gb|ADL11798.1| flagellar hook-associated protein 3 [Acetohalobium arabaticum DSM 5501] Length = 288 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 39/352 (11%), Positives = 108/352 (30%), Gaps = 67/352 (19%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ + + + + + + ++ TG+ D Q ++ E + + Sbjct: 3 VTNGMMVNNLLGNLSDSKERLDEYNRQLSTGKKFDMPSQNPTGTVRSMDLESTISSNKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + +++ LS I+ V G + A +++ + Sbjct: 63 TRNINQSLTWIKSTEGTLSHANDILHRTRELAVKGANGSLNETDRQSIADEVKELKANMK 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN + G+Y+F+G + KP + + +K D + + + Sbjct: 123 GVANTSYNGKYIFAGHKVNIKPYSD-----NSSKYQGDD-----------GKIIREISQG 166 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + + Q DF + + D+ ++ I + E ++ N Sbjct: 167 TEVKINQSGDFFEPILDR------------------MEKLIDNLETGNIDGISNN----- 203 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 +L + V+ K+ +G + + + L Sbjct: 204 ------------ISDLDESLDEVIKKRS----------------EVGAKQNRLELTKNRL 235 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ +S++ V+ L N + ++ + S+ ++L Sbjct: 236 EDDKIKFKELLSQNEDVDIAKTIMNLKMSENVHRAALSSGARIIQPSLTDFL 287 >gi|326796590|ref|YP_004314410.1| flagellar hook-associated protein 3 [Marinomonas mediterranea MMB-1] gi|326547354|gb|ADZ92574.1| flagellar hook-associated protein 3 [Marinomonas mediterranea MMB-1] Length = 404 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 100/360 (27%), Gaps = 50/360 (13%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 +L ++ E + + +L L + L S+ + L+ D+ Sbjct: 45 GAGQVLNYQAENARNDQYEKTMTLAKNALDYEEVSLDSLNTSMDRANRLLIQAQNSANDD 104 Query: 108 NKFPINAGMLRDSYESFVTFANMTD-EGQYLFSGINSSEKPL---------------NGY 151 A L +S N D G Y+FSG +S+ + Y Sbjct: 105 VDLESIAEELSLIVDSMADLMNSKDANGNYIFSGSDSASPTMSKNGAGEYVYGGNETQNY 164 Query: 152 FTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTD-------FIKQLEDKF 204 + + ++ + + D F+ D Sbjct: 165 AQIADGVSIPVNDTGKKVFQDVWTRNTFTATVTAGGATLTSLVDDQDAYDKFVDDNYDAI 224 Query: 205 SDDEYWANNWSNASDHNIKYRIK-DTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTD 263 + + A N + +D + I + + + + ++T Sbjct: 225 TPANNTYTLSTTAGAPNSYSFTDVNGNVVDSGTYEDGNAINVMGMSFTMDSAGSTVSVTL 284 Query: 264 GA-------------------RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 N + + + ++ + I + +G + + Sbjct: 285 DTPTRDNVLNELNNTISVLKDSNATSAERTAALRDATTSIKNTQETVGTALSEVGSRINT 344 Query: 305 LQNKNNIIDTY-------ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + I + +++ G++ A +L + + + + T+L LS+ N L Sbjct: 345 ISAREGYISSKETSNTLAMNEIAGIDLSEAATELQSANTAVSATQSLFTRLASLSLFNSL 404 >gi|126652478|ref|ZP_01724650.1| flagellar hook-associated protein L [Bacillus sp. B14905] gi|126590749|gb|EAZ84864.1| flagellar hook-associated protein L [Bacillus sp. B14905] Length = 315 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 27/309 (8%), Positives = 92/309 (29%), Gaps = 55/309 (17%) Query: 49 VTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN 108 + + ++ + + + L ++ L+ + + ++ + ++ + Sbjct: 61 AVKGMGYRRDLAKVEQYTRNMITAGSWLDSTDESLNQVGEQMKRVRELVIQAATDSNTSE 120 Query: 109 KFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQG 168 + + N G Y+FSG ++E G + ++S + Sbjct: 121 DRDKIKKEIDQIRQQLQDVGNTNIGGSYIFSGTRTNEPLFIGGAINPNTNQESVKVEIYD 180 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKD 228 ++ + + + M + ++D + K Sbjct: 181 GIQLSVNTPGKDLFNNIDDMMGK-ISDLLGDP-------------------------TKT 214 Query: 229 TEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQR 288 E I A + S D + + ++E + Sbjct: 215 GEEI-----------------ASMLGGVSSSTTNDD------------ITAMHNKVLEAQ 245 Query: 289 AVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKL 348 A +G + + L + + + + V+ A ++ T + + + + +K+ Sbjct: 246 ADIGARQNRVEMMENRLGVREVNVTKQLRDNESVDYAKAITEMVTHESIHQAALSVGSKI 305 Query: 349 QKLSILNYL 357 + ++++++ Sbjct: 306 IQQTLVDFI 314 >gi|22126382|ref|NP_669805.1| flagellar hook-associated protein FlgL [Yersinia pestis KIM 10] gi|45441402|ref|NP_992941.1| flagellar hook-associated protein FlgL [Yersinia pestis biovar Microtus str. 91001] gi|108807180|ref|YP_651096.1| flagellar hook-associated protein FlgL [Yersinia pestis Antiqua] gi|108812476|ref|YP_648243.1| flagellar hook-associated protein FlgL [Yersinia pestis Nepal516] gi|145598603|ref|YP_001162679.1| flagellar hook-associated protein FlgL [Yersinia pestis Pestoides F] gi|161760582|ref|YP_070209.2| flagellar hook-associated protein FlgL [Yersinia pseudotuberculosis IP 32953] gi|218928929|ref|YP_002346804.1| flagellar hook-associated protein FlgL [Yersinia pestis CO92] gi|21959368|gb|AAM86056.1|AE013853_4 flagellar biosynthesis protein, hook-filament junction protein [Yersinia pestis KIM 10] gi|45436262|gb|AAS61818.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Microtus str. 91001] gi|108776124|gb|ABG18643.1| flagellar hook-associated protein 3 [Yersinia pestis Nepal516] gi|108779093|gb|ABG13151.1| flagellar hook-associated protein 3 [Yersinia pestis Antiqua] gi|145210299|gb|ABP39706.1| flagellar hook-associated protein 3 [Yersinia pestis Pestoides F] Length = 337 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 43/351 (12%), Positives = 109/351 (31%), Gaps = 35/351 (9%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS ++++ ++ +++ TG+ + + Q ++ ++ Sbjct: 14 LSTSMLYQQNMQGITNAQSLWMQTGQQLSTGKRVVNPSDDPMAASQAVMVSQAESENSQY 73 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + S L+ +Q + ++ ++ A L+ + + Sbjct: 74 TLARSFARQSSSLETTVLAQTTSTIQSIQSLVISAKNDTLSDDDRASYATQLQGLKDQLL 133 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSK--SLLAGQH 182 AN TD G+Y+F+G S + P D ++ + + Sbjct: 134 NQANTTDGNGRYIFAGFKSDKPPF-----------AVSDTGEVTYVGGDVAIEQKVDTNR 182 Query: 183 LEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG 242 + + + DD + + ID N Sbjct: 183 SMTAGHTGASVFMALTGNAKPEPDDVN---------GAPVAAEKNIFDTIDTVLNSLKTP 233 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 ++ + + K L + L+ ++ +A +G+ + ++ Sbjct: 234 LQ------------GASDEVKAQAQADLDKGLRGLSNSLNNVLSVQAEIGVQLQELDNLD 281 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ I +S V+ +A + ++ SY T +Q LS+ Sbjct: 282 SLGGDRTLINKQQLSDLQDVDWTSAISSYVMQQAALQASYTTFTNMQGLSL 332 >gi|51597630|ref|YP_071821.1| flagellar hook-associated protein FlgL [Yersinia pseudotuberculosis IP 32953] gi|186896764|ref|YP_001873876.1| flagellar hook-associated protein FlgL [Yersinia pseudotuberculosis PB1/+] gi|51590912|emb|CAH22568.1| putative flagellar hook-associated protein [Yersinia pseudotuberculosis IP 32953] gi|186699790|gb|ACC90419.1| flagellar hook-associated protein 3 [Yersinia pseudotuberculosis PB1/+] Length = 307 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 1/151 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++ MN + N K++++M+T Q + T +L+ +E+ +I + Sbjct: 3 ISTPTMSSTMNRFITQHNGKLEKINKQMMTQQRITLPSEDPIASTRLLQINREQVNIKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S ++ L+ H+S++ K + + L+ + + N A L ES V Sbjct: 63 SSNISGLSNSLANQTGHVSAINKQLVSIKSSLLSINDSVKSNKDISGVADELNYMLESVV 122 Query: 126 TFANM-TDEGQYLFSGINSSEKPLNGYFTKD 155 N EG+YLF+G S+++P+ T D Sbjct: 123 AGLNAKNSEGRYLFAGTASNKQPITFDKTAD 153 >gi|172058467|ref|YP_001814927.1| flagellar hook-associated protein 3 [Exiguobacterium sibiricum 255-15] gi|171990988|gb|ACB61910.1| flagellar hook-associated protein 3 [Exiguobacterium sibiricum 255-15] Length = 320 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 40/361 (11%), Positives = 108/361 (29%), Gaps = 56/361 (15%) Query: 8 TSSIFERMNILTKELN-KDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 T ++ + NI + + + E++++G+ + + + E + + Sbjct: 4 TQTMLTKTNIGYLSASYQKLSSMQEQLISGKKIQRPSEDPVVAMQGIRYRTEVREVEQFK 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T + + + L+ + + + D + + E T Sbjct: 64 KNVNEATGWMDLTDSALNEVTSAMSRVRELTTQAATDTYDATQRKAIQSEVGQLIEHIGT 123 Query: 127 FANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS 186 AN + +F+G + + Sbjct: 124 MANTKYNEKGIFNGTATDKP---------------------------------------- 143 Query: 187 SMNAQQMTDFIKQ---LEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM--- 240 ++ + + D++ D D A S I+Y I + V+ + Sbjct: 144 FVSIEGLRDYLTSSGKPVDSVFTDGDPATKGS----EIIQYEISSGIQVQVNVSPTDVFS 199 Query: 241 ----RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEK 296 ++ + +E ML + ++ +E RA LG Sbjct: 200 PETFTTLKKLYDALGGVSETGGTA-DSSNNGAQLSAMLKDLDVMVNQTVETRADLGARVN 258 Query: 297 NINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 + L+++ I+ T +S + +E +L + + ++ + ++L++ Sbjct: 259 RLELNASRLEDQEIIVKTVMSDNEDIEAEKVIMELKSYETLHRAALSAGARIIQPTLLDF 318 Query: 357 L 357 L Sbjct: 319 L 319 >gi|117923398|ref|YP_864015.1| flagellin-like protein [Magnetococcus sp. MC-1] gi|117607154|gb|ABK42609.1| Flagellin and related hook-associated proteins-like protein [Magnetococcus sp. MC-1] Length = 401 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 55/403 (13%), Positives = 125/403 (31%), Gaps = 57/403 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ S+++ ++ + ++ E+ +GQ + + + + + + Sbjct: 4 VTQSTLYSTTVTQLQDQYRTMSQIQEKSTSGQEVNRPSDDPTIAYRDMLFSTQLSEVDAL 63 Query: 66 LHSNSLVTKRLSTSQAHLSSMQK---IVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + + L ++R+ ++ +LS+M+ Q +V L ++ + F A + YE Sbjct: 64 VRTTDLASERMRMAETNLSTMEGKMLDAQQLVLTLGTAVQ-SGQPSVFNAAAREAQAIYE 122 Query: 123 SFVTFANMTDEGQYLFSGINSS----------------------EKPLNGYFTKDSLAKK 160 ++ N +G LFSG ++ K GY + Sbjct: 123 DLLSSVNAELDGVPLFSGGKTTLPYSESNLTTSAVKIREGGQGQVKATTGYSAALTGTPT 182 Query: 161 -----------SFDQMLQGFLEENSKSLLAGQHLEVSSMNA-----------QQMTDFIK 198 S D + + G Q D Sbjct: 183 DIPASVRVIYRSTDDAGTALATPQYQVNVNGVEGSTIDSTGFPQTLDLGDGMQLQVDSAP 242 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM----RGIRDIMFVAVIGT 254 +D + A A RI + ++ + G V Sbjct: 243 GDKDALFFEVVPAYQGGAADREV---RIATGQRLEGNVTGEEVMQGTGNGRGADVFAAVA 299 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 L + L+ VQ G + I + AV G+ + L+ ++ + T Sbjct: 300 GLRGALLRNDYEE--INAWLTPVQDGRAQIQDLEAVTGVRTVLMESVNDSLELDSDALKT 357 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +I V+ ++QL ++M ++ S+L+++ Sbjct: 358 VKAVNISVDAFDIYSQLQQTSQAMQMMTASERQILDNSLLDFI 400 >gi|315638380|ref|ZP_07893558.1| flagellin B family protein [Campylobacter upsaliensis JV21] gi|315481508|gb|EFU72134.1| flagellin B family protein [Campylobacter upsaliensis JV21] Length = 750 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+SI M+ + KL ++ +G + + E E + + Sbjct: 10 TNSIQNTMSGASA-----LNKLSMQLSSGMKIQDSYEDASIYIDNTRLEYELKTLEQIKE 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 + S + S S L M K++++ + A L E V Sbjct: 65 ATSSAKEMTSNSMKALQDMVKLLENFKVKVTQAASDSNSQTSREAIAKELEKIKEQIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSINGQYLFAGAQLNHKPFDS 147 Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 10/118 (8%) Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 D+M AV+ + D RN + L + I + +G NI+ Sbjct: 638 DLMIEAVLSGNMRANADADNPRNTGMQGALERLDHLSDHINKLNTTMGAYHNNIDNVNTR 697 Query: 305 ---LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKI--EMSYMITTKLQKLSILNYL 357 L + T ++ + ++ + ++ + S TT + +LS+LNY+ Sbjct: 698 VTFLGVNVQTLKTKVND---ADYGE--TLMNLMQTQLAYQASMKATTTISQLSLLNYM 750 >gi|238794004|ref|ZP_04637622.1| Flagellar hook-associated protein 3 [Yersinia intermedia ATCC 29909] gi|238726636|gb|EEQ18172.1| Flagellar hook-associated protein 3 [Yersinia intermedia ATCC 29909] Length = 344 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 112/349 (32%), Gaps = 31/349 (8%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS ++++ ++ +++ +G+ + + Q ++ ++ Sbjct: 21 LSTSMLYQQNMQGVTNAQSLWMQSGQQLSSGKRVVNPSDDPMAASQAVMVSQAQSENSQY 80 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + S L+ +Q + ++ ++ A L+ + V Sbjct: 81 TLARSFARQSSSLETTVLAQATSTIQSIQTLVISAKSDILSDDDRASYATQLQGLKDQLV 140 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F+G S + P + D QG + + A + + Sbjct: 141 NQANTTDGNGRYIFAGFKSDKPPF--------AVSATGDVTYQGGNVAIEQKVDANRSIT 192 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V + + + D A + ID Sbjct: 193 VGHTGSSVFMALTSNAKPEPDD----------AGGKPVASESNIFNTIDT---------- 232 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + ++ + + K + + L+ ++ +A +G + ++ Sbjct: 233 --VLKSLKVPLQGATDAVKDQATADMDKGIRGLSNSLNNVLSVQAEIGTQLQELDNLDSL 290 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 +++ I +S V+ A + ++ SY T +Q LS+ Sbjct: 291 GSDRSLINKQRLSDLQDVDWTAAISSYVMQQAALQASYTTFTDMQGLSL 339 >gi|332162894|ref|YP_004299471.1| hypothetical protein YE105_C3274 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667124|gb|ADZ43768.1| hypothetical protein YE105_C3274 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 305 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 42/354 (11%), Positives = 120/354 (33%), Gaps = 53/354 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ +S+ M + KL+E++ +G+ + +++ E K+ + + Sbjct: 3 VTNTSMSRIMMDSMANRTVEYAKLNEQLTSGKRVNKISDDPVASMQLVQLENSKSDVNQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++ S +A L S++ + + L+ G + + + + Sbjct: 63 KTNVVRLSGNYSVQEASLKSLEGQLLVVRDKLLAAKNGNHSATESATFGREINLLLDGMM 122 Query: 126 TFANM-TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + N EG YLF+G ++ +P+ K + +G + + Sbjct: 123 SDLNTKNSEGNYLFAGTKTNIEPVE-------YNKTTQTYTFKG-------NNERRDAVV 168 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + Q+ TD + S + + + Sbjct: 169 GNGITLQENTD------------------------------------LSSSLSASGNNLE 192 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + + + + ++ A N L+ ++ G I LG + + Sbjct: 193 ILTNLKKLANKMIDSSIKPAAYNQEISDNLAAIEIGAKKIGGMLTDLGAKQNRLEH-LSN 251 Query: 305 LQNKNNIIDTYIS-KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L + I++ + ++ ++ + + ++++ + K+ +LS+ NY+ Sbjct: 252 LHDDVEIVNANLEKDLAEIDILQVNSAMQSNFLSTKIAHSMQAKISQLSLFNYI 305 >gi|266621928|ref|ZP_06114863.1| putative FgL, flagellar protein [Clostridium hathewayi DSM 13479] gi|288866401|gb|EFC98699.1| putative FgL, flagellar protein [Clostridium hathewayi DSM 13479] Length = 327 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 40/354 (11%), Positives = 116/354 (32%), Gaps = 32/354 (9%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + N + + + ++ + + ++ + A + E Sbjct: 3 ITENMMTAMYNRNLQRNVANLASSNLKLTSQRQYNHVSEDPAAAAKAFTVRDQIARSEEH 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 +++ L T+ ++++++ I++ + G + + A L E + Sbjct: 63 INTVKNAVGELDTADSNIATINSILETVFEKATRA-GGASSQDNLDAIAEELGGLKEEIL 121 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N ++LFSG + E P +++ L V Sbjct: 122 QTMNARYGDKFLFSGSANGEAPFT----------------------LDAEGNLLFNGKAV 159 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + + + + D + S + RI + + + +GI + Sbjct: 160 DAYKPDDPATHFNENKPVYLD-IGFGTYASGTNTEGTGIRISTSGVDVLGYGTDDQGIPN 218 Query: 246 IMFVAV--IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 ++ + I ++ + GA + L++ +++ S I + +G EK ++ + Sbjct: 219 NIYSLIGKIESQLKDGD-KSGAMDTLSQ-----LKKKQSNISIATSEIGTREKLLDRTKD 272 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L++ + V T + ++ + + + SI +++ Sbjct: 273 RLESGLVNLKETQKNLEAVSVETEAVNNKSYETAWMVTLQLGSSIIPPSIFDFM 326 >gi|182412214|ref|YP_001817280.1| flagellar hook-associated protein 3 [Opitutus terrae PB90-1] gi|177839428|gb|ACB73680.1| flagellar hook-associated protein 3 [Opitutus terrae PB90-1] Length = 294 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 117/354 (33%), Gaps = 65/354 (18%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I++++ E M ++L+ + KL +++ +G+ A V +L + E+ +A+ Sbjct: 3 IASNTASEVMLRQIQQLSANQSKLQQQVGSGRRITNPEDDPAAVGRVLTLQSEQRRLAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQ--DMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + + L+ SQ S ++ + Q D L L G +++ A + E Sbjct: 63 EAN---ANRALTLSQTAYSGLKGLKQISDRANELATLGTGAMSSDQMNAYAIEVSQMVEQ 119 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + AN N Y + ++ G + Sbjct: 120 ALQHANSQSG---------------NDYVFAGTDVSNKPFEINTTTGLVEYGGNSDGAPI 164 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 ++S T S + N I Sbjct: 165 QLSEAT---------------------------------------TVVATTSGSTNED-I 184 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 D++ + + L+ D R +Q G + +I A +G + I + Sbjct: 185 ADMLNALISLRDALASGDPDQVRAT-----QPALQVGENTVIGAMADVGGIQTRIEAAKS 239 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +++ +S ++ TA +L+ L E + TTK+ LS+L+Y+ Sbjct: 240 QQADGATNLESRVSDESSLDLPTAIVKLTQLQTAYEAALASTTKVMNLSLLDYI 293 >gi|297583334|ref|YP_003699114.1| flagellar hook-associated protein 3 [Bacillus selenitireducens MLS10] gi|297141791|gb|ADH98548.1| flagellar hook-associated protein 3 [Bacillus selenitireducens MLS10] Length = 436 Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 58/174 (33%), Gaps = 7/174 (4%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T + + L + L +++ TG+ Q + + + + Sbjct: 1 MRVT--QSMMASSSLRHLHQSYQS-LTNLQDQLATGKKITRASQDPVIAMNGMRYRTQVA 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + S V + TS A L + + + V D+ + A + Sbjct: 58 ETDQFKRNLSEVYNWMDTSDATLDQGTQALHRVRELTVQASNDSYDSGQRANIAKEVDQL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFL 170 E ++ +N + +Y+F+G N++ P++ Y D + Sbjct: 118 LEQLLSISNTKNNNKYIFNGTNTTNAPVDQSRMDYGVTQIAEGADIDAADVDLI 171 >gi|304310892|ref|YP_003810490.1| Flagellin [gamma proteobacterium HdN1] gi|301796625|emb|CBL44837.1| Flagellin [gamma proteobacterium HdN1] Length = 412 Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 44/103 (42%), Gaps = 1/103 (0%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 + L Q+ N + ++ L + +A L+S+ I+ + LV G + Sbjct: 45 GTSIALNLRQQVNAAEQYAKNSGSAASMLKSEEASLTSVNDILGRIRDLLVTAGNGILNY 104 Query: 108 NKFPINAGMLRDSYESFVTFANM-TDEGQYLFSGINSSEKPLN 149 A ++ + V+ AN + +G+Y+FSG ++ P+ Sbjct: 105 EDRKTIATEMQGRLDELVSVANTQSADGKYIFSGARTNTMPIT 147 >gi|255021362|ref|ZP_05293410.1| Flagellar hook-associated protein flgL [Acidithiobacillus caldus ATCC 51756] gi|254969225|gb|EET26739.1| Flagellar hook-associated protein flgL [Acidithiobacillus caldus ATCC 51756] Length = 433 Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 49/145 (33%), Gaps = 1/145 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST ++ L +++ TG L ++ + Sbjct: 3 VSTPEFYQSSLSGLLNQQSTLNNLSQQLSTGNVLIDPSSNPVAYAQTLNLSARIANLNQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 SN+ + L S + L S+ ++ + V + G + N ++ + + V Sbjct: 63 QQSNNYAQQNLQLSSSTLQSVSTLINQVQQLAVQMNNGTVNGNDLQNAVTAMQGNLQQLV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN 149 AN D G Y+F G S+ P Sbjct: 123 QLANTQDANGSYIFGGSESNRPPFQ 147 >gi|169831933|ref|YP_001717915.1| flagellar hook-associated protein 3 [Candidatus Desulforudis audaxviator MP104C] gi|169638777|gb|ACA60283.1| flagellar hook-associated protein 3 [Candidatus Desulforudis audaxviator MP104C] Length = 310 Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 121/355 (34%), Gaps = 51/355 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++ + + + ++ E++ +G+ + + A ++ +L + I + Sbjct: 3 ISTHLFYKNLLSSIHREHLGAARVQEQIASGRRINRLSEDPAALSQVLSLRTATSEIRDY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S L RL+ ++ L+ +++QD V G + A + Sbjct: 63 VLSIDLQRSRLNRAEEALAQATQVMQDARVMAVQGATGTYSPSDLKNLAFEVDRMI---- 118 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 L GF + + E Sbjct: 119 --------------------------------------TALVGFANASRGGVKPEGLFER 140 Query: 186 SSMNAQQMTDFIK-QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + ++ Q+M + ++ + E W + + + I + V A + G Sbjct: 141 TVVDGQEMVVYTPPEVWLEQVTGEGWGRV---LTLNKLVETIDPGQVFQVEAMKDEGG-- 195 Query: 245 DIMFVAVIGTEFLS--KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 + + A + L G ++ + ++ ++ + +++ R LG + + + Sbjct: 196 NPVLRATMFDALFDLRDRLMAGEQSGVAG-LIGVLEGHIDTLLQGRGDLGSRGYQLEKLQ 254 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +Q +N + +SK + A +++ ++ + +L +S+LNYL Sbjct: 255 AQIQIQNEQLTEVLSKIGDTDVAEAVIRINRHELVLQATLSTAARLMHVSLLNYL 309 >gi|120598239|ref|YP_962813.1| flagellar hook-associated protein FlgL [Shewanella sp. W3-18-1] gi|120558332|gb|ABM24259.1| flagellar hook-associated protein 3 [Shewanella sp. W3-18-1] Length = 403 Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 57/408 (13%), Positives = 140/408 (34%), Gaps = 63/408 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSS-----DYGLQLGARVTSILEWEQEKN 60 +S++ IF + + + K+ E++ +G+ D LG Q Sbjct: 3 LSSAQIFNQSITSVLQKQTATSKILEQLSSGKKVNTAGDDPVAALGID-----NLNQRNA 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + T RL+ +++ L S + + + ++ + G +++ + A ++ S Sbjct: 58 LVDQFMKNIDYATNRLAVTESKLGSAENLASSIREQVMRAVNGTLADSERQMIADEMKGS 117 Query: 121 YESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ-----------MLQG 168 E ++ AN D G Y+FSG ++ ++P + S D L Sbjct: 118 LEELLSIANSKDESGNYMFSGYSTDKEPFAFDNSTPPQIVYSGDSGVRNSLVQTGVALGT 177 Query: 169 FLEENSKSLLAGQHLEVSSMN--AQQMTDF------IKQLEDKFSDDE--YWANNWSNAS 218 + ++ + A L S+N A Q +F I +D + +N + Sbjct: 178 NVPGDTAFMKAPNGLGDYSVNYLASQQGEFSVKAAKIADTSTYLADTYTFNFTDNGVGGT 237 Query: 219 D-----------------------------HNIKYRIKDTEGIDVSANVNMRGIRDIMFV 249 + + + + + + I Sbjct: 238 NLQVLDSANNPVANVTNFDATTPVSFNGIEVKVSGKPSAGDSFTMEPQAEVSIFDTISSA 297 Query: 250 AVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKN 309 + + S N G ++L+ + G++ I R+V G + K + + + Sbjct: 298 IALIEDPNSANTPQG--RAQLAQILNDIDSGVNQISSARSVAGNNLKAVESYKDTHIEEQ 355 Query: 310 NIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +S ++ +A + + + +K+ +S+ +Y+ Sbjct: 356 VLNTSALSLLEDLDYASAITEFEKQQLALNAVSSVFSKVGSVSLFDYI 403 >gi|188991634|ref|YP_001903644.1| flagellar hook-associated protein FlgL [Xanthomonas campestris pv. campestris str. B100] gi|167733394|emb|CAP51595.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 401 Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 119/398 (29%), Gaps = 44/398 (11%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ISTS ++ + +L ++ +GQ + + ++ Sbjct: 1 MTNRISTSMMYSQSVSAMTAKQSRLNQLEAQLSSGQRLVTAKDDPVAAGTAVGLDRALAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + V RL + L+ + + V + A L Sbjct: 61 ITRFGENANNVQNRLGLQENALAQAGDKMARVTELAVQSNNSSLSPDDRKAIASELTALR 120 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPL----NGYFTKDSLAKKSFDQMLQGFLEENSKS 176 +S V+ AN TD G+YLF+G + P +K + F+ + Sbjct: 121 DSMVSLANSTDGTGRYLFAGTSDGNAPFIKSNGNVLYNGDQTQKQVEVAPDTFVSDTLPG 180 Query: 177 LL------AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSN----ASDH------ 220 G + NA + + + W + A+D Sbjct: 181 SEIFMRIRTGDGSVDAHANATNTGTGLLLDFSRDASSGSWNGGSYSVQFTAADTYEVRDS 240 Query: 221 -------------------NIKYRIKDTEGIDVSANVNMRGIRDIMFVA-VIGTEFLSKN 260 ++ RI + S + G +D+ + S Sbjct: 241 TNALVSTGTYKDGEDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDDMVAALNSDT 300 Query: 261 LTDGARNVLTKK---MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 T + + + + Q S +I+ RA G I+ L++ + T +S Sbjct: 301 QTPTQKAAMINTLQSSMRDIAQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLS 360 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ +A Q ++ + I ++Q S+ N Sbjct: 361 SIRDLDYASAIGQYELERASLQAAQTIFQQMQSSSLFN 398 >gi|237653576|ref|YP_002889890.1| flagellar hook-associated protein FlgL [Thauera sp. MZ1T] gi|237624823|gb|ACR01513.1| flagellar hook-associated protein 3 [Thauera sp. MZ1T] Length = 302 Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 110/353 (31%), Gaps = 55/353 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ I+++ I ++ + + +++ TG+ L+ Q K+ + Sbjct: 3 VSTNMIYDQGVIALQKQSAALLHTGQQIATGRKILTPSDDPVASARALDVSQSKSVNQQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L L +I+Q ++ + A LR +++ + Sbjct: 63 ITNQGYADDALKLVDGQLDGAGEIIQYARERVLAAGNPALSPSDRQSIASDLRSQFDAML 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN D G YLF+G S+ P T +L ++ +S + Sbjct: 123 AIANTRDANGDYLFAGYRSNTPPFEKTVTAGTLGSDYKGDQGSRTMQVSSSRFMPISFGG 182 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 S ++ D + ++ +F + S A + Sbjct: 183 ESVFGSE--GDGVFKVLGEFISALEGGGDVSGAVSTAL---------------------- 218 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 L D LT RA +G + + + Sbjct: 219 --------------GGLDDSLDRTLT----------------VRAQIGSQQVEVEQLGFI 248 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + T +S ++ + A ++L+ +E + K LS+ NYL Sbjct: 249 GSDLDLQYQTTLSNLQDLDYNEAISRLTQQRTFLEAAQQSFLKTTGLSLFNYL 301 >gi|212640401|ref|YP_002316921.1| flagellar hook-associated protein FlgL [Anoxybacillus flavithermus WK1] gi|212561881|gb|ACJ34936.1| Flagellar hook-associated protein [Anoxybacillus flavithermus WK1] Length = 290 Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 39/328 (11%), Positives = 98/328 (29%), Gaps = 65/328 (19%) Query: 30 HEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKI 89 +++ TG+ + + + I + + S + S++ L+ + Sbjct: 27 QQQLATGKKIHRPSEDPVVAMKGMHYRTSLTEIEQFQRNLSEAYTWMENSESALNHTTNV 86 Query: 90 VQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLN 149 +Q +V G A + + V AN G+Y+F+G N + P+ Sbjct: 87 LQRARELVVQGKNGTLGQEDRRAIAREIEQLKKDLVQVANTKVAGKYIFNGTNIEQAPVT 146 Query: 150 GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEY 209 F+ E +K + ++ +++ Q + D ++Q+E++ + Sbjct: 147 DGTPPTVTNNN------DDFMVEVAKGVKLKINVTPNNVFNQGLFDTLQQIENELASPTN 200 Query: 210 WANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVL 269 +N L L +VL Sbjct: 201 SLDN-------------------------------------------LLSQLDGHINDVL 217 Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 ++ LG + L + I IS + + Sbjct: 218 AERA----------------ELGARVNRLELVEQRLSEQQLIAKRMISDNEDADIEKIIT 261 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 +L + + + + ++ + +++++L Sbjct: 262 ELKSQESVHRAALSVGARIIQPTLVDFL 289 >gi|256750926|ref|ZP_05491810.1| flagellar hook-associated protein 3 [Thermoanaerobacter ethanolicus CCSD1] gi|256750261|gb|EEU63281.1| flagellar hook-associated protein 3 [Thermoanaerobacter ethanolicus CCSD1] Length = 297 Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 37/125 (29%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 K + TG+ V + L + + L + + L+ Sbjct: 23 LQKNQNMLSTGKKISRPSDDPVAVATSLRIRTDMARNDAYTKNADYAKSWLDITDSALNQ 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 + ++Q V G A + + N G+Y+F+G ++ Sbjct: 83 LGDLLQRTRELAVQGANGTLTQADMQKMANEIEQLKAQMIQVGNTQYNGRYIFAGFKTTT 142 Query: 146 KPLNG 150 +P + Sbjct: 143 QPFSE 147 Score = 39.3 bits (90), Expect = 0.93, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 44/108 (40%), Gaps = 1/108 (0%) Query: 250 AVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKN 309 ++ + L L G ++ ++ V + + ++ RA +G I+ + LQ+ N Sbjct: 190 LLVMMDNLKSALDSGDHQAVSNLIVD-VDKQMENVLAVRAEVGAKSNRIDLIQNRLQDDN 248 Query: 310 NIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +SK+ V+ L N S ++ + S++++L Sbjct: 249 YNFTALLSKNEDVDLAQVITNLQMDENVYRASLAAGARIIQPSLIDFL 296 >gi|89092143|ref|ZP_01165098.1| Flagellin-like [Oceanospirillum sp. MED92] gi|89083878|gb|EAR63095.1| Flagellin-like [Oceanospirillum sp. MED92] Length = 415 Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 56/416 (13%), Positives = 131/416 (31%), Gaps = 68/416 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IST +F + + D K +++ TG+ SD L I ++++E Sbjct: 3 ISTQQVFLNNIDNISKTSADVFKTQQQLSTGKKVLQPSDDPLA----SAQIQKFKKEIAR 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + + +RL + + + + + G ++ A + Sbjct: 59 TEQYNSNIEVSERRLQLEENTIEQINNQSIRLRELTIQGKTGTLNDTDRAAIASEVDQII 118 Query: 122 ESFVTFANMT-DEGQYLFSGINSSEKPLN----------------GYFTKDSLAKKSFDQ 164 +S N +G++LFSG +P + K + Sbjct: 119 KSLDGLMNTKDVQGEFLFSGNKGFTEPYTIDPRTGRYVFNGDDGQRFLQVGPETKVASTD 178 Query: 165 MLQGFLEENSK------SLLAGQHLEVSSMNAQQMTDFIKQLEDK------FSDDEY-WA 211 E K + + +++S + F ++ F+D ++ Sbjct: 179 SGFDIFETVPKVSGYVIADINQTSQQIASNEIKDADAFDAFTVERGALQITFNDGAGTFS 238 Query: 212 NNWSNASDHNIKY-------------------RIKDTE------GIDVSANVNMRGIRDI 246 S + ++ TE D + V+ +I Sbjct: 239 VTDSQTPPQPVSSDDTPPVVLTNVAFNDGDVIKVAGTELTVGNITADSTITVDAISQHNI 298 Query: 247 MFVAV-IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGI----IEQRAVLGISEKNINEE 301 + A+ + E + + T + + + + LSGI + RA +G + ++ Sbjct: 299 LNTALDLKAELENADFTTQEGKDKFNERMDHILENLSGIEELNVGTRANIGGRLNTLEQQ 358 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +S ++ + A +Q ++ +Y ++Q L++ N+L Sbjct: 359 MSVNTDYELFTTESLSAFEDLDYNEAISQFQLQQTVLQAAYSSFARVQDLNLFNFL 414 >gi|254225808|ref|ZP_04919413.1| flagellar hook-associated protein FlgL [Vibrio cholerae V51] gi|125621714|gb|EAZ50043.1| flagellar hook-associated protein FlgL [Vibrio cholerae V51] Length = 397 Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 52/405 (12%), Positives = 126/405 (31%), Gaps = 65/405 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G+ SD L I Q++ Sbjct: 5 ISSFHNYQAVQNDIRRQESKVFNNQAQLASGKKLLSASDNPLA----THYIQNVGQQEEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + L + LV RL + +S+ ++ ++ ++ G A +L++ Sbjct: 61 LRQYLDAIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMA 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL------------NGYF--------------TK 154 +F+ AN+ D G Y+F+G +P + Y Sbjct: 121 NNFINLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYAGDDYQRKMKISNSLEIPFNNP 180 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS-SMNAQQMTDFIKQLEDKFSDDEYWA-- 211 S + + + LE + ++N + + D + Sbjct: 181 GSKVFMEIPNPFGSYEPNYALQEGSELLLERAVNLNPDDTSSYRVTFVDMPEGKNGYQLE 240 Query: 212 NNWSNAS---------------DHNIKYRIKDTEGID----VSANVNMRGIRDIMFVAVI 252 N S + +K +I + I+ + +V RD + A Sbjct: 241 RNGSVVQAGEFDAKTGIQFEELNIQLKGQISKGDAIELTPRTTFSVFDT-FRDAIRYA-- 297 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 +++D + +++ + + R +G ++ + ++ + Sbjct: 298 -----EGSVSDASNTAKLHQLVEEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKISL 352 Query: 313 DTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S ++ A + +E S K + L++ NY+ Sbjct: 353 AKSKSTFEDLDYAEAVIDFNENSRALEASQKAFGKTKDLTLFNYI 397 >gi|167038178|ref|YP_001665756.1| flagellar hook-associated protein FlgL [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039113|ref|YP_001662098.1| flagellar hook-associated protein FlgL [Thermoanaerobacter sp. X514] gi|300913297|ref|ZP_07130614.1| flagellar hook-associated protein 3 [Thermoanaerobacter sp. X561] gi|307723689|ref|YP_003903440.1| flagellar hook-associated protein 3 [Thermoanaerobacter sp. X513] gi|320116587|ref|YP_004186746.1| flagellar hook-associated protein 3 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166853353|gb|ABY91762.1| flagellar hook-associated protein 3 [Thermoanaerobacter sp. X514] gi|166857012|gb|ABY95420.1| flagellar hook-associated protein 3 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|300889982|gb|EFK85127.1| flagellar hook-associated protein 3 [Thermoanaerobacter sp. X561] gi|307580750|gb|ADN54149.1| flagellar hook-associated protein 3 [Thermoanaerobacter sp. X513] gi|319929678|gb|ADV80363.1| flagellar hook-associated protein 3 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 297 Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 37/125 (29%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 K + TG+ V + L + + L + + L+ Sbjct: 23 LQKNQNMLSTGKKISRPSDDPVAVATSLRIRTDMARNDAYTKNADYAKSWLDITDSALNQ 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 + ++Q V G A + + N G+Y+F+G ++ Sbjct: 83 LGDLLQRTRELAVQGANGTLTQADMQKMANEIEQLKAQMIQVGNTQYNGRYIFAGFKTTT 142 Query: 146 KPLNG 150 +P + Sbjct: 143 QPFSE 147 Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 1/108 (0%) Query: 250 AVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKN 309 ++ + L L G ++ ++ V + + ++ RA +G I+ + LQ+ N Sbjct: 190 LLVMMDNLKSALDSGDHQAVSNLIVD-VDKQMENVLAVRAEVGAKSNRIDLIQNRLQDDN 248 Query: 310 NIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +SKS + L N S ++ + S++++L Sbjct: 249 YNFTALLSKSEDADLAQVITNLKMDENVYRASLAAGARIMQPSLIDFL 296 >gi|253688965|ref|YP_003018155.1| flagellar hook-associated protein 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755543|gb|ACT13619.1| flagellar hook-associated protein 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 317 Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 112/355 (31%), Gaps = 51/355 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS ++++ K E++ TG+ S + Q ++ ++ Sbjct: 3 LSTSMMYQQNMQGIINGQATWQKTGEQLSTGKRVVNPSDDPIAAASAIMLGQAQSENSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + +S ++ L+ + + VI G +++ A LR + Sbjct: 63 TLARTFAKQSMSLEESILNKSSTTITSALTE-VIKGGGVLNDDDRKSVATSLRGMKAELL 121 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNG------YFTKDSLAKKSFDQMLQGFLEENSKSLL 178 AN TD G Y+FSG + P Y + + D + ++ Sbjct: 122 NMANSTDGNGNYIFSGYETDNPPFVDGATGIQYVGGNQAISQRVDSARNMTVGHTGSAVF 181 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 G + + ++ E +D++ Sbjct: 182 NG-------VTGDAKKEPDGSIQSDLF------------------------ETLDIAIKA 210 Query: 239 NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 + D + ++T + + L+ I RA LGI I Sbjct: 211 LETPLAD------------ADDVTKANVAAALETANRGLNNSLNNISSVRAELGIQLNEI 258 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++++ T +S+ + + A + + ++ SY +Q +S+ Sbjct: 259 DNLDAVGKDRDVANKTTLSQLQDTDWYEAISSYIMQQSSLQASYTAFQNMQGMSL 313 >gi|187926947|ref|YP_001893292.1| flagellar hook-associated protein 3 [Ralstonia pickettii 12J] gi|241665276|ref|YP_002983635.1| flagellar hook-associated protein 3 [Ralstonia pickettii 12D] gi|187728701|gb|ACD29865.1| flagellar hook-associated protein 3 [Ralstonia pickettii 12J] gi|240867303|gb|ACS64963.1| flagellar hook-associated protein 3 [Ralstonia pickettii 12D] Length = 319 Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 116/354 (32%), Gaps = 41/354 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ F + + + + L +++ +G + + + + + +Q ++ + Sbjct: 3 VSTAQFFALSSASMQNTQSNLLTLQQQLASGIALNSAGDNPSAFGQMAQLQQTQDANDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + RL+ + L+++ +Q +V +++ ++ Y+ + Sbjct: 63 QVNRDATDARLTNVSSALTNLVTTLQQGKQSMVGANTSLMTDSQRIGVLAQVKQQYQQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN D G LF G N + P +Q + + +AG + Sbjct: 123 SIANQRDPSGVALFGGANGTTDPFVSSGGSVQYVGTGQPPTVQVSQNISMPNSVAGDSVF 182 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM-RGI 243 V RI +T+ + SAN ++ + Sbjct: 183 V---------------------------------------RIPNTDPANPSANQSIFKTY 203 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 +++ ++ + + + ++ + +G + I Sbjct: 204 ENLITALSTPINAATQATDVASLQKAVQTAQGNLDNAYQVALQAQVTVGTQQAQITTLNS 263 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 N + ISK V+ +A +Q S ++ + T +Q +S+ Y+ Sbjct: 264 SGSNYGEQLKEQISKLQSVDYTSAISQFSQQQVSLQAAQKTFTAMQGMSLFQYI 317 >gi|223039734|ref|ZP_03610019.1| bacterial flagellin N-terminus domain protein [Campylobacter rectus RM3267] gi|222878926|gb|EEF14022.1| bacterial flagellin N-terminus domain protein [Campylobacter rectus RM3267] Length = 775 Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 60/175 (34%), Gaps = 5/175 (2%) Query: 24 KDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 K KL+ ++ +G + + + + E + + + S + L Sbjct: 45 KALYKLNTQISSGLKIQNSFEDSSVYNDGMRLDYEVATLEQVQTATSKAQHFSKNTDKAL 104 Query: 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINS 143 S ++ ++ LV A L+ V AN + GQ+LF+G Sbjct: 105 SEFKQQLERFKTKLVQGANEIHSQTSREAIANDLQGIKNHLVNIANTSINGQFLFAGSAI 164 Query: 144 SEKPLNG----YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS-SMNAQQM 193 + KP+NG Y+ K + +N L G+ + + + + M Sbjct: 165 NTKPINGETNEYYGNAQSMKAVGGAQVNLTYNQNGHELFLGKDGDYAKKITSNTM 219 >gi|50120646|ref|YP_049813.1| flagellar hook-associated protein FlgL [Pectobacterium atrosepticum SCRI1043] gi|49611172|emb|CAG74618.1| flagellar hook-associated protein 3 [Pectobacterium atrosepticum SCRI1043] Length = 317 Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 108/349 (30%), Gaps = 39/349 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS ++++ K E++ TG+ ++ Q ++ ++ Sbjct: 3 LSTSMMYQQNMQGIINGQATWQKTGEQLSTGKRVVNPSDDPIAAAGVVMLGQAQSENSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + ++ ++ L V + VI G +++ A LR + Sbjct: 63 TLARTFAKQSMTLEESILGKSTTTVSSALTE-VIKGGGVLNDDDRKSVATSLRGMKAELL 121 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G Y+FSG + + P K F + Q ++ Sbjct: 122 NMANSTDGNGNYIFSGYETDKAPFVE-GAAGIEYKGGFQAISQRVDAARDMTVSHVGSAV 180 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + + ++ E +D++ + Sbjct: 181 FNGITGDAKKEPDGSIQSDLF------------------------ETLDIAIKALETPL- 215 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + T + + + I RA LGI ++ Sbjct: 216 -----------DGADDATKAGVAAALETANRGLNNSFNNISAVRAELGIQLNEVDNLDAV 264 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++++ T +S+ + + A + + ++ SY +Q +S+ Sbjct: 265 GKDRDVANKTTLSQLQDTDWYEAISSYIMQQSSLQASYTSFQNMQGMSL 313 >gi|255030456|ref|ZP_05302407.1| flagellar hook-associated protein FlgL [Listeria monocytogenes LO28] Length = 274 Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 58/133 (43%) Query: 23 NKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAH 82 + + K ++ +G+ + + IL + + + + L+T++ Sbjct: 3 SGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNREKTDVTEAKSLLNTAETS 62 Query: 83 LSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGIN 142 LSSM + + ++ + G +D + +A ++ + ++ AN D+G+Y+FSG + Sbjct: 63 LSSMSTSMNRVNALVLQAINGTSDKDNMSQSAEEIKGLLDVLISVANSEDDGRYVFSGSS 122 Query: 143 SSEKPLNGYFTKD 155 +S KP T Sbjct: 123 TSVKPFTTDKTTG 135 Score = 37.4 bits (85), Expect = 3.3, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 62/196 (31%), Gaps = 15/196 (7%) Query: 176 SLLAGQHLEVSSMNAQQMTDFIKQLEDKFS--DDEYWANNWSNASDHNIKYRIKDTEGID 233 ++ + S +A+++ + L + DD + + S+ S E I Sbjct: 80 AINGTSDKDNMSQSAEEIKGLLDVLISVANSEDDGRYVFSGSSTSVKPFTTDKTTGEIIY 139 Query: 234 VSANVNMRGIRD--------IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTV----QQGL 281 N + R + + F + A K LS + + + Sbjct: 140 NGTTENKK-FRVTDTLEVEVFHDGSAMTDVFNNIQKIVDAMKTGDKDALSALQETNSKNI 198 Query: 282 SGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 I +G + + L +K S V A + L+ + + Sbjct: 199 EIITNSMTNIGGQKNGVTAYDNVLSSKIVDFSERKSNVEEVNMPEAVSNLNKTSIAYQAA 258 Query: 342 YMITTKLQKLSILNYL 357 + +QKLSILNY+ Sbjct: 259 LQSSVMVQKLSILNYM 274 >gi|149366244|ref|ZP_01888279.1| flagellar hook-associated protein 3 [Yersinia pestis CA88-4125] gi|153949096|ref|YP_001401282.1| flagellar hook-associated protein FlgL [Yersinia pseudotuberculosis IP 31758] gi|165926015|ref|ZP_02221847.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. F1991016] gi|165938694|ref|ZP_02227249.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. IP275] gi|166010848|ref|ZP_02231746.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua str. E1979001] gi|166211142|ref|ZP_02237177.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua str. B42003004] gi|167401154|ref|ZP_02306657.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420376|ref|ZP_02312129.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425889|ref|ZP_02317642.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467498|ref|ZP_02332202.1| flagellar hook-associated protein FlgL [Yersinia pestis FV-1] gi|170024640|ref|YP_001721145.1| flagellar hook-associated protein FlgL [Yersinia pseudotuberculosis YPIII] gi|186895121|ref|YP_001872233.1| flagellar hook-associated protein FlgL [Yersinia pseudotuberculosis PB1/+] gi|229896252|ref|ZP_04511422.1| flagellar hook-associated protein 3 [Yersinia pestis Pestoides A] gi|229897189|ref|ZP_04512345.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229897916|ref|ZP_04513067.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. India 195] gi|229902853|ref|ZP_04517970.1| flagellar hook-associated protein 3 [Yersinia pestis Nepal516] gi|270486638|ref|ZP_06203712.1| flagellar hook-associated protein 3 [Yersinia pestis KIM D27] gi|294504023|ref|YP_003568085.1| flagellar hook-associated protein [Yersinia pestis Z176003] gi|51589300|emb|CAH20921.1| flagellar hook-associated protein 3 [Yersinia pseudotuberculosis IP 32953] gi|115347540|emb|CAL20449.1| flagellar hook-associated protein 3 [Yersinia pestis CO92] gi|149292657|gb|EDM42731.1| flagellar hook-associated protein 3 [Yersinia pestis CA88-4125] gi|152960591|gb|ABS48052.1| flagellar hook-associated protein 3 [Yersinia pseudotuberculosis IP 31758] gi|165913308|gb|EDR31930.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. IP275] gi|165922219|gb|EDR39396.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. F1991016] gi|165990192|gb|EDR42493.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua str. E1979001] gi|166208322|gb|EDR52802.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua str. B42003004] gi|166962071|gb|EDR58092.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049543|gb|EDR60951.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055288|gb|EDR65085.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751174|gb|ACA68692.1| flagellar hook-associated protein 3 [Yersinia pseudotuberculosis YPIII] gi|186698147|gb|ACC88776.1| flagellar hook-associated protein 3 [Yersinia pseudotuberculosis PB1/+] gi|229680300|gb|EEO76399.1| flagellar hook-associated protein 3 [Yersinia pestis Nepal516] gi|229688957|gb|EEO81022.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. India 195] gi|229693526|gb|EEO83575.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701175|gb|EEO89204.1| flagellar hook-associated protein 3 [Yersinia pestis Pestoides A] gi|262361791|gb|ACY58512.1| flagellar hook-associated protein [Yersinia pestis D106004] gi|262366073|gb|ACY62630.1| flagellar hook-associated protein [Yersinia pestis D182038] gi|270335142|gb|EFA45919.1| flagellar hook-associated protein 3 [Yersinia pestis KIM D27] gi|294354482|gb|ADE64823.1| flagellar hook-associated protein [Yersinia pestis Z176003] gi|320015456|gb|ADV99027.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 326 Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 43/351 (12%), Positives = 109/351 (31%), Gaps = 35/351 (9%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS ++++ ++ +++ TG+ + + Q ++ ++ Sbjct: 3 LSTSMLYQQNMQGITNAQSLWMQTGQQLSTGKRVVNPSDDPMAASQAVMVSQAESENSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + S L+ +Q + ++ ++ A L+ + + Sbjct: 63 TLARSFARQSSSLETTVLAQTTSTIQSIQSLVISAKNDTLSDDDRASYATQLQGLKDQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSK--SLLAGQH 182 AN TD G+Y+F+G S + P D ++ + + Sbjct: 123 NQANTTDGNGRYIFAGFKSDKPPF-----------AVSDTGEVTYVGGDVAIEQKVDTNR 171 Query: 183 LEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG 242 + + + DD + + ID N Sbjct: 172 SMTAGHTGASVFMALTGNAKPEPDDVN---------GAPVAAEKNIFDTIDTVLNSLKTP 222 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 ++ + + K L + L+ ++ +A +G+ + ++ Sbjct: 223 LQ------------GASDEVKAQAQADLDKGLRGLSNSLNNVLSVQAEIGVQLQELDNLD 270 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ I +S V+ +A + ++ SY T +Q LS+ Sbjct: 271 SLGGDRTLINKQQLSDLQDVDWTSAISSYVMQQAALQASYTTFTNMQGLSL 321 >gi|319427082|gb|ADV55156.1| flagellar hook-associated protein 3 [Shewanella putrefaciens 200] Length = 403 Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 56/408 (13%), Positives = 138/408 (33%), Gaps = 63/408 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSS-----DYGLQLGARVTSILEWEQEKN 60 +S++ IF + + + K+ E++ +G+ D LG Q Sbjct: 3 LSSAQIFNQSITSVLQKQTATSKILEQLSSGKKVNTAGDDPVAALGID-----NLNQRNA 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + T RL+ +++ L S + + + +V + G +++ + A ++ S Sbjct: 58 LVDQFMKNIDYATNRLAVTESKLGSAENLTSSIREQVVRAVNGTLADSERQMIADEMKGS 117 Query: 121 YESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ-----------MLQG 168 E ++ AN D G Y+FSG ++ ++P + S D L Sbjct: 118 LEELLSIANSKDESGNYMFSGYSTDKEPFAFDNSIPPKIVYSGDSGIRNSLVQSGVALGT 177 Query: 169 FLEENSKSLLAGQHLEVSSMN--AQQMTDF------------------------------ 196 + +S + A L S+N A Q +F Sbjct: 178 NVPGDSAFMKAPNGLGDYSVNYLASQQGEFSVKTAKIADASTYLADTYTFNFIDNGLGGT 237 Query: 197 -------IKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFV 249 ++ + N + + + + + + I Sbjct: 238 NLQVLDSANNPVANVTNFDATTPVSFNGIEVKVSGKPSAGDSFTMEPQAEVSIFDTISSA 297 Query: 250 AVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKN 309 + + S N G ++L+ + G++ I R+V G + K + + + Sbjct: 298 IALIEDPNSANTPQG--RAQLAQILNNIDSGVNQISSARSVAGNNLKAVESYKETHTEEK 355 Query: 310 NIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +S+ ++ +A + + + +K+ +S+ +++ Sbjct: 356 VVNTSALSRLEDLDYASAITEFEKQQLALNAVSSVFSKVGSVSLFDFI 403 >gi|288940416|ref|YP_003442656.1| flagellar hook-associated protein 3 [Allochromatium vinosum DSM 180] gi|288895788|gb|ADC61624.1| flagellar hook-associated protein 3 [Allochromatium vinosum DSM 180] Length = 425 Score = 53.6 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 53/144 (36%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ISTS IF+ + K ++ TGQ T ++++ + Sbjct: 3 ISTSQIFQSGLSAMQGAQSKFNKTGLQLATGQRILTPADDPGGATQSVQFKAAIKATEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + +L +A L ++ ++Q +V + I A +R E + Sbjct: 63 QRNADYAQPKLEYEEAQLIALGNVLQRARELVVAGNNDTYNPENRKIIASEIRQLREDIL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL 148 AN D G+YLF+G S +P Sbjct: 123 GLANSEDANGEYLFAGTRSQHQPF 146 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 46/109 (42%), Gaps = 3/109 (2%) Query: 252 IGTEFLSKNLTDGARNVL---TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNK 308 I T F + + R L T LS + GL + E R +G+ ++ + + Sbjct: 317 IATAFETPATDETTRESLSQATSMALSNLDSGLDRVNEVRTSVGLRLDALDTQAGLNDER 376 Query: 309 NNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +++ +S ++ A ++ ++ + T++ +LS+ ++L Sbjct: 377 LVDLNSTLSDIQDLDYAEAISRFMLQRTVLQAAQQTYTQVSRLSLFDFL 425 >gi|325923281|ref|ZP_08184954.1| flagellar hook-associated protein 3 [Xanthomonas gardneri ATCC 19865] gi|325546208|gb|EGD17389.1| flagellar hook-associated protein 3 [Xanthomonas gardneri ATCC 19865] Length = 401 Score = 53.6 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 56/400 (14%), Positives = 119/400 (29%), Gaps = 44/400 (11%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ISTS ++ + +L ++ +GQ + + ++ Sbjct: 1 MTDRISTSMMYSQSVSSMTAKQSRLNQLEAQLASGQRLVTAKDDPVAAGTAVGLDRALAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + V RL + L+ + + + + A L Sbjct: 61 ITRFGENANNVKNRLGLQENVLAQAGDAMARVNELTIQANSSALGPDDRKAIASELTALR 120 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPL----NGYFTKDSLAKKSFDQMLQGFLEENSKS 176 +S V+ AN TD G+YLF G P G ++ + F+ + Sbjct: 121 DSMVSLANSTDGTGRYLFGGTADGSAPFIKSNGGVVYNGDQTQRQVEVAPDTFVSDTLPG 180 Query: 177 LL------AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA------------------- 211 G + N+ + + + W Sbjct: 181 SEIFMRIRTGDGNVDAHANSANTGTGLLLDFSRDASTGSWNGGSYSVQFTAANTYEVRDS 240 Query: 212 ----------NNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVA-VIGTEFLSKN 260 + + + ++ RI + S + +D+ + S Sbjct: 241 TNAVVSTGTYKDGEDITAAGVRMRISGAPAVGDSFQIGASTTKDVFSTIDDLVGALNSDT 300 Query: 261 LTDGARNVLTK---KMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 LT + + + + Q S +I+ RA G I+ L++ + T +S Sbjct: 301 LTPPQKAAMINTLQTSMRDISQASSKMIDARASGGAQLSAIDNANALLESNEVTLKTTLS 360 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ +A Q ++ + I+ ++Q S+ N L Sbjct: 361 SIRDLDYASAIGQYQLEKASLQAAQTISQQMQSSSLFNLL 400 >gi|21231390|ref|NP_637307.1| flagellar hook-associated protein FlgL [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768557|ref|YP_243319.1| flagellar hook-associated protein FlgL [Xanthomonas campestris pv. campestris str. 8004] gi|21113055|gb|AAM41231.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573889|gb|AAY49299.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004] Length = 401 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 57/398 (14%), Positives = 118/398 (29%), Gaps = 44/398 (11%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ISTS ++ + +L ++ +GQ + + ++ Sbjct: 1 MTNRISTSMMYSQSVSAMTAKQSRLNQLEAQLSSGQRLVTAKDDPVAAGTAVGLDRALAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + V RL + L+ + + V + A L Sbjct: 61 ITRFGENANNVQNRLGLQENALAQAGDKMARVTELAVQSNNSSLSPDDRKAIASELTALR 120 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPL----NGYFTKDSLAKKSFDQMLQGFLEENSKS 176 +S V+ AN TD G+YLF+G P ++ + F+ + Sbjct: 121 DSMVSLANSTDGTGRYLFAGTADGNAPFIKSNGNVLYNGDQTQRQVEVAPDTFVSDTLPG 180 Query: 177 LL------AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSN----ASDH------ 220 G + NA + + + W + A+D Sbjct: 181 SEIFMRIRTGDGSVDAHANATNTGTGLLLDFSRDASSGSWNGGSYSVQFTAADTYEVRDS 240 Query: 221 -------------------NIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNL 261 ++ RI + S + G +D+ L+ + Sbjct: 241 TNALVSTGTYKDGGDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDDMVAALNSDT 300 Query: 262 TDGARNVLT----KKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 + + + + Q S +I+ RA G I+ L++ + T +S Sbjct: 301 QTPTQKAAMINTLQSSMRDIAQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLS 360 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ +A Q ++ + I ++Q S+ N Sbjct: 361 SIRDLDYASAIGQYELERASLQAAQTIFQQMQSSSLFN 398 >gi|328543141|ref|YP_004303250.1| hypothetical protein SL003B_1522 [polymorphum gilvum SL003B-26A1] gi|326412887|gb|ADZ69950.1| hypothetical protein SL003B_1522 [Polymorphum gilvum SL003B-26A1] Length = 511 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 62/177 (35%), Gaps = 4/177 (2%) Query: 15 MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 + +L+ + ++ +G+ + +G + LE Q+ I + ++ Sbjct: 13 LTQQLSKLSNSMTEKTAQLASGKKATTYGGIGNQRLLDLELTQKVTRIESYEQTITMAKL 72 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG 134 + T L M+K+ + + + + + ++ N G Sbjct: 73 HIETLNLTLDRMEKLRIEAKDTMDLNNFELQSDGQTST-QATAEILLHEVISLLNAEIGG 131 Query: 135 QYLFSGINSSEKPL--NGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN 189 YLF G +++ P+ K +L F + N + G+ L+VS++ Sbjct: 132 HYLFGGSDANTNPVLEVDQILHGRDGKAGLLTVLDEFAQANLGAGGMGR-LDVSALT 187 Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 61/203 (30%), Gaps = 15/203 (7%) Query: 161 SFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDH 220 + D F + + + A + + N + Sbjct: 318 AADSFFDTFGGAEPMRVAGPPFDTATGLIAGG-----SATVAWYRGENTPTAN----ART 368 Query: 221 NIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLST---- 276 + + D I N +G+ D++ + T A N + Sbjct: 369 DKTAVVDDNLRIGYGVRANEQGLADVVKTLATFVAADFSSGTATAENYYSALAGDLKSTL 428 Query: 277 --VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTL 334 + SGI+ + ++ K I + I K G+++ T +L + Sbjct: 429 QPLGTDRSGIVGITTEIAVAYKTIGYTSDRHTLMKSSYLGTIDKIEGIDKETVAIELLQM 488 Query: 335 INKIEMSYMITTKLQKLSILNYL 357 IE SY T+ + LS+ NY+ Sbjct: 489 QTNIEASYRATSIVLNLSLTNYI 511 >gi|146305257|ref|YP_001185722.1| flagellar hook-associated protein FlgL [Pseudomonas mendocina ymp] gi|145573458|gb|ABP82990.1| flagellar hook-associated protein 3 [Pseudomonas mendocina ymp] Length = 305 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 89/225 (39%), Gaps = 8/225 (3%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ S I M+ + + KL ++M +G+ +L ++E+ + + Sbjct: 4 ITNSQITSMMHNSMNASSAELGKLMQQMASGKRILLPSDDPIASVRVLRVQREEASLEQF 63 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + V+ LST +A+L S + ++ L+ G + AG L ++ Sbjct: 64 RKNIANVSGSLSTQEANLKSTSDSMLNVRDLLLWAANGSNTSEDLAAMAGELSIIEDTIF 123 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 +FAN+ DE G+YLFSG S L+ + + D+ Q + Sbjct: 124 SFANVRDEEGRYLFSGTLSDTPALSFDAATQTYSLTGNDKHRQAAVANGVLVDENVTAAS 183 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDT 229 V M + ++ L + D +ASD ++ +I DT Sbjct: 184 VFGA-GVDMLNQLRGLINTLRDPAL------DASDPAVRQQIVDT 221 >gi|138896698|ref|YP_001127151.1| flagellar hook-associated protein FlgL [Geobacillus thermodenitrificans NG80-2] gi|134268211|gb|ABO68406.1| Flagellar-hook associated protein 3 [Geobacillus thermodenitrificans NG80-2] Length = 301 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 51/144 (35%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ S + M + K E++ TG+ + + + + + Sbjct: 3 VTQSMLANNMLKHLSASYANLGKYQEQLSTGKKINRPSDDPVVAMKGMAYRTNLTEVEQL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + S A L + +Q + +V + + + ++ E V Sbjct: 63 KRNFSEAYNWIENSDAALDKATQALQRIRELIVQASNDTYEETQRQAISQEIKQLTEHLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLN 149 T AN +Y+F+G N+ + P+ Sbjct: 123 TIANTKVGDKYIFNGTNTLQPPVQ 146 Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 34/88 (38%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + L + Q ++ ++ RA LG + + + I +S + V+ Sbjct: 213 INEYLGYIDQHITNLLGVRAELGARMNRVELMEDRINQQEVIAKKVLSDNEDVDMERVIT 272 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 L + + + ++ + +++++L Sbjct: 273 DLKVQESVHRAALAVGARIIQPTLVDFL 300 >gi|261211315|ref|ZP_05925603.1| flagellar hook-associated protein FlgL [Vibrio sp. RC341] gi|260839270|gb|EEX65896.1| flagellar hook-associated protein FlgL [Vibrio sp. RC341] Length = 397 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 53/406 (13%), Positives = 126/406 (31%), Gaps = 67/406 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G+ SD L I Q++ Sbjct: 5 ISSFHNYQAVQNDIRRQESKVFNNQAQLASGKKLLSASDNPLA----THYIQNVGQQEEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + L + LV RL + +S+ ++ ++ ++ G A +L++ Sbjct: 61 LRQYLDAIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMA 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL------------NGYF--------------TK 154 +F+ AN+ D G Y+F+G +P + Y Sbjct: 121 SNFLNLANVQDESGNYIFAGTKPKNQPFFRDNQGNVSYAGDDYQRKMKISNSLEIPFNNP 180 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS-----SMNAQQMTDFIKQLEDKFSDDEY 209 S + + + LE + A F+ + ++ Sbjct: 181 GSKVFMEIPNPFGSYEPNYALQEGSELLLERAVNLNPDDTAAYRVTFVDMPDG--NNGYQ 238 Query: 210 WANNWS---------------NASDHNIKYRIKDTEGIDVS---ANVNMRGIRDIMFVAV 251 N S N + +K +I + ID++ RD + A Sbjct: 239 LERNGSVVQAGEFDPKTGIQFNELNIQVKGQITKGDAIDLTPRDTYSVFDTFRDAIRYA- 297 Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 +++D + +++ + + R +G ++ + ++ Sbjct: 298 ------EGSVSDASNTAKLHQIVEEFHTAFIHLNKTRTDIGARLNTLDIQEEQHEDFKIS 351 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + S ++ A + + +E S K + L++ NY+ Sbjct: 352 LAKSKSTFEDLDYADAVIEFNENSRALEASQKAFGKTKDLTLFNYI 397 >gi|254458028|ref|ZP_05071455.1| flagellar hook-associated protein [Campylobacterales bacterium GD 1] gi|207085421|gb|EDZ62706.1| flagellar hook-associated protein [Campylobacterales bacterium GD 1] Length = 690 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 77/223 (34%), Gaps = 6/223 (2%) Query: 20 KELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTS 79 +L+++ +++++ +G Y + + E + + S K + + Sbjct: 12 SKLSQNLFDVNKQIASGLQIQYAKDNVRTFAETMRLDNELATLGQVKMSTQSGYKVSNQT 71 Query: 80 QAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFS 139 L+ + + M L+ G D A LR F AN + GQYLFS Sbjct: 72 DVILNEFETTMNRMRTLLLQAANGTNDATSLDSVAKELRGIESHFKGLANSSINGQYLFS 131 Query: 140 GINSSEKPLNGYFT----KDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTD 195 G KP+ T S+ + + Q + L + L + + + Sbjct: 132 GTAVDIKPIADDGTYMGNDKSMNSFTGSKTQQQYNISGGDLFLGEEVLVRREITSNVPQE 191 Query: 196 FIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 + + + + D++I+ + DT+ + + N Sbjct: 192 NLIRKYPALGLPTANTTHMNP--DNSIRDLMGDTDNVIDTVNA 232 >gi|229916659|ref|YP_002885305.1| flagellar hook-associated protein 3 [Exiguobacterium sp. AT1b] gi|229468088|gb|ACQ69860.1| flagellar hook-associated protein 3 [Exiguobacterium sp. AT1b] Length = 310 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 38/334 (11%), Positives = 108/334 (32%), Gaps = 45/334 (13%) Query: 24 KDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 ++ E++++G+ + + + E + + + S T + + + L Sbjct: 21 NTLARVQEQLISGKRIQKASEDPVVAMQGIRYRTEVREVDQFRRNVSEATSWMDLTDSTL 80 Query: 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINS 143 + + + V+ + ++++ I + E + AN +Y+++G + Sbjct: 81 NEVTEAVKRIRELTTQAANDTYESSQREIIKSEVDQLIEHIGSLANSKAGEKYIYNGTKT 140 Query: 144 SEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDK 203 + +N + ++ Sbjct: 141 DQP----------------------------------------LINVDNLKAYLANPAG- 159 Query: 204 FSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTD 263 S D + + + + I++ + + V+ +++ + L + T Sbjct: 160 -SVDSIYESGTAPTASGKIEFEVSKGITVQVNMQPETVFGKELFEGLHKLSTLLKETTTT 218 Query: 264 GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE 323 GA L T+ Q +I +RA LG + LQ+ I T +S + ++ Sbjct: 219 GADLSAELDTLDTLGQ---NLITERAELGARANRLELVDNRLQDHEIIAKTIMSDNEDID 275 Query: 324 QHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +L + + ++ + ++L++L Sbjct: 276 VEKVIMELKSHETVHRAALSAGARIIQPTLLDFL 309 >gi|317492421|ref|ZP_07950850.1| flagellar hook-associated protein 3 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919760|gb|EFV41090.1| flagellar hook-associated protein 3 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 326 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 117/354 (33%), Gaps = 41/354 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 +STS ++++ + + ++ +++ +G+ SD L + ++ +Q + Sbjct: 3 LSTSMMYQQNMGSITDAQSEWQRIGQQLTSGKRVINPSDDPLA----ASQLVGLKQAQAQ 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDS 120 + + + +S ++ L + +QD+ LV G ++ A L Sbjct: 59 NDQYTMARGYARQGVSMEESVLQQVTSTLQDITPVLVDGASSGSKSDDDRASIAKQLEGM 118 Query: 121 YESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 + + AN +D G+Y+F+G + P + Sbjct: 119 RDQLLNLANSSDGNGRYVFAGFKNDTAPFEKVTDP---------------VTGKVTVNYK 163 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 G V+ I AS + IK + + Sbjct: 164 GGDTAVTQKVDAARDMTISHTGSDVFQ---------KASSNPIK---EPDGSVSSDIFST 211 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 ++ D + + G K A ++ L+ + + RA LG + K ++ Sbjct: 212 LQKAIDALKTPIAGATDAEKKGVSDA----IDSANRGLRNTLNNVSQVRAELGTNLKELD 267 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + IS + V+ + + + S ++ SY T +Q +S+ Sbjct: 268 SLDAVGSERAMTYTSRISSTQDVDWYQSISDYSLRQVALQASYKAFTDMQGMSL 321 >gi|262404533|ref|ZP_06081088.1| flagellar hook-associated protein FlgL [Vibrio sp. RC586] gi|262349565|gb|EEY98703.1| flagellar hook-associated protein FlgL [Vibrio sp. RC586] Length = 397 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 51/404 (12%), Positives = 124/404 (30%), Gaps = 63/404 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G+ SD L I Q++ Sbjct: 5 ISSFHNYQAVQNDIRRQESKVFNNQAQLASGKKLLSASDNPLA----THYIQNVGQQEEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + L + LV RL + +S+ ++ ++ ++ G A +L++ Sbjct: 61 LRQYLDAIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMA 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL------------NGYF--------------TK 154 +F+ AN+ D G Y+F+G +P + Y Sbjct: 121 SNFLNLANVQDESGNYIFAGTKPKNQPFFRDNQGNVSYAGDDYQRKMKISNSLEIPFNNP 180 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS-----SMNAQQMTDFIKQLED------- 202 S + + + LE + + F+ + Sbjct: 181 GSKVFMEIPNPFGSYEPNYTLQEGSELLLERAVNLNPDDTSAYRVTFVDMPDGKNGYQLE 240 Query: 203 -----KFSDDEYWANNWSNAS-DHNIKYRIKDTEGIDVS---ANVNMRGIRDIMFVAVIG 253 S + A + +K +I + ID++ RD + A Sbjct: 241 RNGSVVQSGEFDPKTGIQFAELNIQVKGQITKGDAIDLTPRDTYSVFDTFRDAIRYA--- 297 Query: 254 TEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 +++D + +++ + + R +G ++ + ++ + Sbjct: 298 ----EGSVSDASNTAKLHQIVEEFHTAFIHLNKTRTDIGARLNTLDIQEEQHEDFKISLA 353 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S ++ A + + +E S K + L++ NY+ Sbjct: 354 KSKSTFEDLDYADAVIEFNENSRALEASQKAFGKTKDLTLFNYI 397 >gi|295697520|ref|YP_003590758.1| flagellar hook-associated protein 3 [Bacillus tusciae DSM 2912] gi|295413122|gb|ADG07614.1| flagellar hook-associated protein 3 [Bacillus tusciae DSM 2912] Length = 296 Score = 53.2 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 39/332 (11%), Positives = 99/332 (29%), Gaps = 59/332 (17%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 L ++ +G+ + V + ++ + + + + + L + ++ Sbjct: 23 LSSLQDQAASGKRINRPADDPVGVGFAMRYKAQVAYYGQYQQNADMAKGWLDYTDTVMNQ 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 +++ V + A + + VT N G+Y+F+G ++ Sbjct: 83 AGDVIKRARELAVEGASDTVPPDARQALASEVDQLLQQMVTIGNSQYNGKYIFNGQATTT 142 Query: 146 KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFS 205 KP + N +S + + + + + +F Sbjct: 143 KP---------------------YDTANPESSVTNGGQVLYDI-GDGVHLDVNVPGSRFF 180 Query: 206 DDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGA 265 A+N AV+ N D A Sbjct: 181 GSPTEADN----------------------------------VFAVLKQLRDGLNGNDTA 206 Query: 266 RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 + + L + S ++E RA +G ++ + L + + + +SK+ + Sbjct: 207 K---IEDALGKIDSRYSKMLEVRADVGARSNRVDLAQNRLGDMVQNLTSLLSKTEDADMG 263 Query: 326 TAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L + N S + ++ S++++L Sbjct: 264 KLAIDLKSAENVHMASLAVGARVLMPSLVDFL 295 >gi|88858136|ref|ZP_01132778.1| flagellar hook-associated protein 3 [Pseudoalteromonas tunicata D2] gi|88819753|gb|EAR29566.1| flagellar hook-associated protein 3 [Pseudoalteromonas tunicata D2] Length = 519 Score = 53.2 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 84/252 (33%), Gaps = 23/252 (9%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 I T++ ++R + + EE+ +G+ SD + SI++ ++E + Sbjct: 3 IGTANFYQRSLASLQSRQVSLDRAQEELSSGKKVIRPSDDPVA----SNSIIKLKKELDV 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + L + S + ++ L+SM I+ + L + G DN+ + Y Sbjct: 59 SSRYLDAQSTANRYNREAETSLTSMNNILLRLQESLSGAINGALDNDGLIAYREQIASRY 118 Query: 122 ESFVTFANM-TDEGQYLFSGINSSEKPLN-------GYFTKD-------SLAKKSFDQML 166 E + N G Y+FSG + KP Y + + Sbjct: 119 EEYEGIVNQKNANGDYMFSGFQTRTKPYQSDSFGYFDYQGDSGQRQVLIAPSFDVAVTEP 178 Query: 167 QGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRI 226 N S + ++ + Q++ ++ AN + + + Sbjct: 179 GNSFASNVASKFSHYRPASAAASGAQVSLGFVTDGAEYRAPTAPANTYQIQFSGAVPPQA 238 Query: 227 KDTEGIDVSANV 238 + +DVS Sbjct: 239 DTWQVVDVSLPA 250 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 34/92 (36%) Query: 266 RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 R + +L V + I R+ +G +I+ E ++ ++ + Sbjct: 428 RADVLGALLEEVTNAQTNIDNTRSQIGARMNSISNEGDAQLLFKEATKITLADLEEIDVY 487 Query: 326 TAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 A L ++ + ++Q LS+ +Y+ Sbjct: 488 EAVTNLENSRVGLQAAQQAFARVQNLSLFDYI 519 >gi|149927805|ref|ZP_01916056.1| flagellar hook-associated protein 3 [Limnobacter sp. MED105] gi|149823427|gb|EDM82658.1| flagellar hook-associated protein 3 [Limnobacter sp. MED105] Length = 325 Score = 53.2 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 62/214 (28%), Gaps = 17/214 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSS-----DY---GLQLGARVTSI 52 M IST+ F+ + + VKL ++ TGQ D + LGA+ Sbjct: 1 MAIGRISTNQYFKLSTDRMSKQQTELVKLQGQLATGQRVLKPSDDPLAMSVALGAKAG-- 58 Query: 53 LEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPI 112 I + + V +L L S I+ + + I Sbjct: 59 ------VKTIDSYQSNITYVNNQLGQMDVALQSASDIMVSIKEAFLQAGNAALSPADREI 112 Query: 113 NAGMLRDSYESFVTFAN-MTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLE 171 A + E AN G Y+FSG ++P + G Sbjct: 113 IAQDIEGRMEELRGIANRTDANGYYMFSGTFQDQEPFQTPGGAITGTFLETSTAAAGEAV 172 Query: 172 ENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFS 205 + +A S+ Q ED F+ Sbjct: 173 VGREIQVASGRFVNLSITGQDAFVDPNTNEDAFA 206 >gi|295110885|emb|CBL27635.1| Flagellin and related hook-associated proteins [Synergistetes bacterium SGP1] Length = 1319 Score = 53.2 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 18/148 (12%), Positives = 53/148 (35%), Gaps = 5/148 (3%) Query: 2 KTTGISTS-SIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 + T + + ++ + + + L +++ T + + + ++ LE + Sbjct: 4 RATSVGSYKTLLSSLQGNYRNIQN----LQKQLATLKKYSNLSENPSAISRALELQSAIG 59 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + L ++ L + + + ++ + + I A + + Sbjct: 60 ANEDYKENGENAVALLKHAEGVLDQVLNAAKAIRTLVIQAGDAALSKSDREIIAKQIEAN 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPL 148 ++ + N GQYLF G ++ E P Sbjct: 120 RQTILDALNTKVAGQYLFGGTSTGEAPF 147 Score = 40.5 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 47/139 (33%), Gaps = 2/139 (1%) Query: 219 DHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQ 278 D R + + N + R + + + + G R L++ ML + Sbjct: 1182 DDPANTRKPQGIFVQNTTNRSGANERK-QNGYEMFGDV-TAAVRAGNRTGLSEVMLPRID 1239 Query: 279 QGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKI 338 + ++ + G + L +N ++ + V+ QL Sbjct: 1240 AFIDNVLSVLSSNGAMQNRYKANMDRLTTENTLLTETHDELATVDPAEIATQLMMANYVY 1299 Query: 339 EMSYMITTKLQKLSILNYL 357 + + + +L + S+L+++ Sbjct: 1300 QSNLAVIAQLIQPSLLDFI 1318 >gi|207109301|ref|ZP_03243463.1| flagellar hook-associated protein FlgL [Helicobacter pylori HPKX_438_CA4C1] Length = 141 Score = 53.2 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 3/141 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGI 141 E + AN + G++LF G+ Sbjct: 118 REHMMNVANTSIGGEFLFGGV 138 >gi|332140553|ref|YP_004426291.1| flagellar hook-associated protein FlgL [Alteromonas macleodii str. 'Deep ecotype'] gi|327550575|gb|AEA97293.1| flagellar hook-associated protein FlgL [Alteromonas macleodii str. 'Deep ecotype'] Length = 404 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 54/154 (35%), Gaps = 1/154 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ I+++ D E++ +G+ L +E + + + Sbjct: 3 ISTNQIYDQNIRSILNNQSDLANTQEQLASGKKLLKPSDDPVGAAKALRLTEELDSLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 +N LVT L + L+++ + + G + + L+ + Sbjct: 63 QRNNDLVTGSLELQETVLTNVTNSINRARTLAIQAGNGAYSSADRAAISSELKQIKLEIL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLA 158 N D G YL+SG S ++ + + A Sbjct: 123 DLMNTKDANGNYLYSGYQSGKQAFEFEPSSNGNA 156 >gi|330445356|ref|ZP_08309008.1| flagellar hook-associated protein 3 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489547|dbj|GAA03505.1| flagellar hook-associated protein 3 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 411 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 7/147 (4%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEW---EQEKNHI 62 IST+S ++ + + + + ++ TG+ + G S + Q+ I Sbjct: 5 ISTASQYQSLTSNLMRKQGEVSESNNKLSTGKRVE---TAGDDPVSSVTIQNYRQQLTQI 61 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + S ++ RL ++ ++ ++ + ++ ++ G +N L + Sbjct: 62 DQYKSSITMANNRLGVMESSIAGVEDNLDATKQKVLRMINGAMASNDRTAFKDELISLRD 121 Query: 123 SFVTFANMTD-EGQYLFSGINSSEKPL 148 + AN D G Y+F+G KP Sbjct: 122 GLLELANSRDESGSYVFAGDQMDTKPF 148 Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 43/99 (43%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 K + A + ++ + + ++R+ +G + + ++ + ++T S Sbjct: 313 KPTSSAAAEATLQGVIDDIDSSFVHVSQRRSEVGTIMQQVERQQDQHLDFELTLNTAQSG 372 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A +++ + ++ S +K ++LS+ NYL Sbjct: 373 LEDLDYSKAIMEMNQQMMALQASQSAFSKTKQLSLFNYL 411 >gi|262273521|ref|ZP_06051335.1| flagellar hook-associated protein FlgL [Grimontia hollisae CIP 101886] gi|262222499|gb|EEY73810.1| flagellar hook-associated protein FlgL [Grimontia hollisae CIP 101886] Length = 307 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 112/353 (31%), Gaps = 53/353 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +S++ + E M + ++ EM + + ++ +E+++IA+ Sbjct: 3 LSSAQLNEMMFTSIQTSTAGVNRVLTEMGSQKKMLAASDDPLGAVQVMMLNREQSNIAQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN-AGMLRDSYESF 124 + + + K+L+ +++H+ + + + +L + A L + Sbjct: 63 QKNITNLEKQLTLTESHIDASNNALLRAEELVASVLNASNSDKTGREAIASELEGILDQL 122 Query: 125 VTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 ++ AN + G Y+FSG + + +D Sbjct: 123 LSEANSQNPNGDYIFSGTKTDTPAV----ARDPDTGLYV--------------------- 157 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGI-DVSANVNMRG 242 S A +I + D+ N G Sbjct: 158 ---------------------FQGNQEQRMVSVAEST----QIPANQTAHDLYFNGADDG 192 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 +A + + +T A + + + G+ + +G +++ Sbjct: 193 SDIFNTLASVIDDLRDPAVTGDALTASVSRAQTHISAVREGMGQVLTDVGAQRASMDRIA 252 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ + + IS ++ A +L+T + ++ + M TK+Q LS+ Sbjct: 253 GAHEDNALMNENLISDVEDLDYSEAILRLNTHMAALQATQMSYTKIQNLSLFK 305 >gi|309779454|ref|ZP_07674215.1| flagellar hook-associated protein 3 [Ralstonia sp. 5_7_47FAA] gi|308921695|gb|EFP67331.1| flagellar hook-associated protein 3 [Ralstonia sp. 5_7_47FAA] Length = 319 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 41/353 (11%), Positives = 109/353 (30%), Gaps = 39/353 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +S++ F + + + + L +++ +G + + + + +Q ++ + Sbjct: 3 VSSAQFFAASSASMQNTQSNLLTLQQQIASGIALTSAGDNPSAFGQMAQLQQTQDANDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + RL++ + L+++ +Q LV ++ ++ Y+ + Sbjct: 63 QSNRDTTDARLTSVSSALTNLVTTLQQGKQTLVGANTSLMTESQRVGVLAQVKQQYQQLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN D G LF G N + P + ++ Sbjct: 123 STANQRDAAGVALFGGANGTTDPFTNTGGSVQYVGS----------GQPPVVQVSQNISM 172 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 +S++ + I S+AS+ N + T Sbjct: 173 PNSVSGDSVFVRIPN---------------SDASNPNANQSVFKT-------------YE 204 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 ++ ++ + + ++ + +G + + Sbjct: 205 KLITALSTPINAATQATDVANLQKAVQTAQGNLDNAYQVALQAQVTVGTQQAQLTTLNSS 264 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 N + ISK V+ +A +Q S ++ + T +Q +S+ Y+ Sbjct: 265 GSNYGEQLKEQISKLQSVDYTSAISQFSQQQVSLQAAQKTFTAMQGMSLFQYI 317 >gi|256376484|ref|YP_003100144.1| flagellar hook-associated protein 3 [Actinosynnema mirum DSM 43827] gi|255920787|gb|ACU36298.1| flagellar hook-associated protein 3 [Actinosynnema mirum DSM 43827] Length = 292 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 103/302 (34%), Gaps = 16/302 (5%) Query: 59 KNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLR 118 + + ER S +++ L +Q + +++ + L +D ++A LR Sbjct: 3 ISRVTERSMSTGILSS-LQRNQNKMDQLREAISSGKQ-----LTKPSDGPTDTVSAMQLR 56 Query: 119 DSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLL 178 ++ +GQ + L+ A+ Q +++ +++ Sbjct: 57 TEIAERGAYSRSAVDGQARLGAAET---ALSSTSDLLLRARDLVLQGKSAQSQDSREAIA 113 Query: 179 AGQHLEVSSMNAQQMTDFIKQLE--DKFSDDEYWANNWSN-ASDHNIKYRIKDTEGIDVS 235 A +SM T ++ + + + +A++ S D + RI + + V Sbjct: 114 AEIDAIRTSMIGLANTTYLDRPVFGGTTAGGQAFASDGSYLGDDGQVMRRIANGTQVRVD 173 Query: 236 ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISE 295 + G V+ + + + + + G+ + +G Sbjct: 174 VPADTFGTGSNQVFKVLESIAGNMRSNPAGLSADLDR----LDSGIKTVNTAVTGIGTRY 229 Query: 296 KNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ Q + + +S+ V+ A +L T E S T ++ + S+L+ Sbjct: 230 GQLSAADDAGQAQVVTLSARLSQIEDVDVAAAVVELQTQTVAYEASLAATARIVQPSLLD 289 Query: 356 YL 357 +L Sbjct: 290 FL 291 Score = 39.7 bits (91), Expect = 0.69, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 1/150 (0%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + ++ S+ + + +L E + +G+ S ++ E Sbjct: 1 MNISRVTERSMSTGILSSLQRNQNKMDQLREAISSGKQLTKPSDGPTDTVSAMQLRTEIA 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 S RL ++ LSS ++ LV+ + + A + Sbjct: 61 ERGAYSRSAVDGQARLGAAETALSSTSDLLLRAR-DLVLQGKSAQSQDSREAIAAEIDAI 119 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 S + AN T + +F G + + Sbjct: 120 RTSMIGLANTTYLDRPVFGGTTAGGQAFAS 149 >gi|157961178|ref|YP_001501212.1| flagellar hook-associated protein FlgL [Shewanella pealeana ATCC 700345] gi|157846178|gb|ABV86677.1| flagellar hook-associated protein 3 [Shewanella pealeana ATCC 700345] Length = 400 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 55/398 (13%), Positives = 131/398 (32%), Gaps = 46/398 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +F + + + + ++ E++ +G+ + I Q+ + Sbjct: 3 ISTAQMFHQTSSNVLKGQSATSQILEQLASGKKVNTAGDDPIAAAGIDNLNQQSALTNQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 L + + RL+ S++ + S + ++Q M ++ + G ++ A +R S E + Sbjct: 63 LKNIDYASNRLAVSESKIGSAETLIQSMHEGMLRSVNGTLNDADRQAIADEMRSSLEELM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKD---SLAKKSFDQMLQGFLEENSKSLLAGQ 181 + AN D G LF+G + P + + S D ++ + S Sbjct: 123 SIANSKDESGNSLFAGFATDTTPFAFDNSGNVVYSGDSGVRDSIVASGITVGSNIAGDSI 182 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEY----------------WANNWSNASDHNIKYR 225 + ++ ++ F+ + + +N + D N+ Sbjct: 183 FMNAANAIGDYSVNYSASQTGSFTVESAKVTDASLPVVGDYTFDFVDNGAGGLDLNVTDS 242 Query: 226 IKDTEGI---DVSANVNMRGIRDIMFVAVIGTEF-----------------------LSK 259 + I D S V + GI + + Sbjct: 243 SGGVDTIPNFDPSQPVTVDGIELQFKGTPVAGDTFSMSPETQSNIFDTLNSAISLLEDGA 302 Query: 260 NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKS 319 L ++L+ V G + R+V G S K++ + + + + +S Sbjct: 303 KLNSPQGQSEMAQLLNNVTSGQEQMAMSRSVAGNSLKSLESYTDTHKEEQLVNQSALSLL 362 Query: 320 IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A + + + +K+ S+ +Y+ Sbjct: 363 EDLDYAEAITEFEKQQLALNAVSSVFSKVGSTSLFDYI 400 >gi|254785379|ref|YP_003072808.1| flagellar hook-associated protein 3 [Teredinibacter turnerae T7901] gi|237687446|gb|ACR14710.1| flagellar hook-associated protein 3 [Teredinibacter turnerae T7901] Length = 533 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 61/156 (39%), Gaps = 10/156 (6%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ IF N + +++ V E++ TG +D + T I++ + + Sbjct: 3 ISSLQIFNIANKSMSDASREMVHTQEQLSTGARVLTPADDPVA----STKIMQLTTDLAN 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKT-DNNKFPINAGMLRDS 120 I + + L L ++ ++S+ ++Q + V T +++ A + Sbjct: 59 IDQYRKNIDLAENNLVAEESAMTSVGNLLQRIQELAVQAGNTATLSESEYDALAAEVDTR 118 Query: 121 YESFVTFANM-TDEGQYLFSGINSSEKPLNGYFTKD 155 + + N G Y+F G S ++P +G Sbjct: 119 LDELLNLLNSQNANGDYIFGGYKSGQEPFSGTAASG 154 Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats. Identities = 23/214 (10%), Positives = 68/214 (31%), Gaps = 4/214 (1%) Query: 140 GINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQ 199 G + L+G T + + G + ++ + + +T + Sbjct: 320 GGRTETLTLDGLVTNAADFVALMNSTGNGNAQILAELGVTVDATGFKVASGAPIT--LGG 377 Query: 200 LEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSK 259 + + S+ S + + D ID S + + + F Sbjct: 378 GSGNLNAVTGLTVDGSSTSADGVPGKPGDRVFIDSSNK--QDVLTTLARFSEAMKHFDGS 435 Query: 260 NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKS 319 + + + + + L ++ + I++ A LG + R + + + + Sbjct: 436 DESRESLDKMVGVTLDNLKNAQTSILDVTAKLGARYNTLESTRDLHLDTELVTRDVLGEL 495 Query: 320 IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ A +LS ++ + ++ +L++ Sbjct: 496 RDLDYAEATTRLSAQSMILQAAQSTFIRVSQLNL 529 >gi|304317610|ref|YP_003852755.1| flagellar hook-associated protein 3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779112|gb|ADL69671.1| flagellar hook-associated protein 3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 295 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 85/309 (27%), Gaps = 60/309 (19%) Query: 49 VTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN 108 V + L+ + E + LS + L + ++Q V G + Sbjct: 46 VANTLKIKTEIARNDAYTKNTDDAKSWLSLTDTALGQIGDLLQSARDLAVQGSNGTLTQS 105 Query: 109 KFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQG 168 A + + + N G+Y+F+G ++ KP + + + D Sbjct: 106 DMQNLAAQVDQLKQQIIQVGNTQYNGRYIFAGYKTNRKPFSD------TNRYAGDDGAIQ 159 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKD 228 F + AG + ++ ++ D + + +N + + + I D Sbjct: 160 F------EIGAGGNTIQVNVTGDKVFDVTSGTSQLLNVMDNLSNALKSGDNQTVSNIIGD 213 Query: 229 TEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQR 288 + L ++ R Sbjct: 214 ------------------------------------------------IDNQLQNVLAIR 225 Query: 289 AVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKL 348 A G I+ L + N +SK+ + L N S + Sbjct: 226 ADAGAKANRIDLTANRLSDDNYNFTALLSKNQDADIAQVITNLKMDENVYRASLASGAMI 285 Query: 349 QKLSILNYL 357 + S++++L Sbjct: 286 IQPSLVDFL 294 >gi|82777305|ref|YP_403654.1| flagellar hook-associated protein FlgL [Shigella dysenteriae Sd197] gi|309788153|ref|ZP_07682759.1| flagellar hook-associated protein 3 [Shigella dysenteriae 1617] gi|81241453|gb|ABB62163.1| hook-filament junction protein [Shigella dysenteriae Sd197] gi|308924005|gb|EFP69506.1| flagellar hook-associated protein 3 [Shigella dysenteriae 1617] Length = 298 Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 95/322 (29%), Gaps = 48/322 (14%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN TD G+Y+F+G + P + Y K+ D + Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGH--------- 174 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 ++ D I D N D I Sbjct: 175 -------TGDKIFDSITSNAVAEPDGSASETNLFAMLDSAI------------------- 208 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 A + T K ++ L+ ++ RA LG + Sbjct: 209 --------AALKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESL 260 Query: 302 RVFLQNKNNIIDTYISKSIGVE 323 ++ +S + V+ Sbjct: 261 DSLASDRALGQTQQMSDLVDVD 282 >gi|297531375|ref|YP_003672650.1| flagellar hook-associated protein 3 [Geobacillus sp. C56-T3] gi|297254627|gb|ADI28073.1| flagellar hook-associated protein 3 [Geobacillus sp. C56-T3] Length = 297 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 95/352 (26%), Gaps = 58/352 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ S + + K ++ TG+ + + + + Sbjct: 3 ITQSMLANNTLKQITRSYANLDKYQTQLSTGKKITRPSDDPVVAMKGIAYRSNLAEVEQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + S + L + +Q + V + + A +R E V Sbjct: 63 KRNFSEAYNWVENSDSALDKATQALQRIRELTVQASNDTYEETQRQAIAKEVRQLTEHLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 T AN +Y+ G + + Sbjct: 123 TIANTKVGDKYI----------------------------FNGAKTTDPPVTVNPDGTIS 154 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 S N+QQ+ N A I I + + D Sbjct: 155 VSTNSQQV-------------------NIELAKGIYIPVNIPPS----TAFGAGSGLFSD 191 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 + + + + T K + L+ ++ RA LG I + Sbjct: 192 LQN---LAASLENPSTTGDDVTGYLDK----LDSHLTNLLGVRAELGARMNRIELMEDRI 244 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ I + +S + V+ L T + + + ++ + +++++L Sbjct: 245 DSQQVIAEKMLSDNEDVDLEKVITDLKTQESVHRAALAVGARVIQPTLVDFL 296 >gi|157363534|ref|YP_001470301.1| flagellar hook-associated protein 3 [Thermotoga lettingae TMO] gi|157314138|gb|ABV33237.1| flagellar hook-associated protein 3 [Thermotoga lettingae TMO] Length = 296 Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 107/352 (30%), Gaps = 59/352 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ I ER+ ++ K H+++ +G Y T + + + Sbjct: 3 ITNKMIGERVLTNIQKNINSIAKFHDQLSSGLKVRYPSDDAVTATRTSNLKSRLRELEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L++ L + I Q + + G + + + ++ E + Sbjct: 63 ERNIDHAENILNSYDTSLQEISSIYQRLRELITQGANGILTDEQRKAISQEVKQIKEQLI 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN Y+F+G S++ P+ +D + D F+ + G + Sbjct: 123 QIANTQIGTDYIFAGYASNKPPV----DQDGNIVLNPDSAKSRFVNALGYRVEYGLSAKD 178 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 M+ F + ID++ N Sbjct: 179 VFQTDSGMSVF---------------------------------QLIDITINA------- 198 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 ++ ++ + ++ +S + A +G ++ + + Sbjct: 199 ------------LESNDQETLGGISLMSMDYLEDTVSKGL---AKIGADQRMVEMISTRI 243 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ N + YISK + +LST + + + ++++++ Sbjct: 244 EDLNTFMTEYISKETDADITEVLTKLSTHQAALTAALKSAANVLTSTLVDFI 295 >gi|170751913|ref|YP_001758173.1| hypothetical protein Mrad2831_5545 [Methylobacterium radiotolerans JCM 2831] gi|170658435|gb|ACB27490.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM 2831] Length = 532 Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 49/139 (35%), Gaps = 7/139 (5%) Query: 225 RIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDG----ARNVLTKKMLSTVQQG 280 ++ T + A N ++++ + F D + K + + Sbjct: 394 QVSATGSVGTGARANDPTVQNV-LAGLATMAFGLPTTNDANTYNTYQTVATKAGNLLSSA 452 Query: 281 --LSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKI 338 + + L I+ ++ + N + + + +L + N++ Sbjct: 453 NQTPSVQDTVTQLTIASTRLSNAGTTNKALQNTVQNTLDGIEQISPEEVITKLLDVQNRL 512 Query: 339 EMSYMITTKLQKLSILNYL 357 + SY +T L KLS++NY+ Sbjct: 513 QASYQVTATLSKLSLVNYI 531 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 53/148 (35%), Gaps = 2/148 (1%) Query: 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHI 62 T + S + R + L L ++ +GQ S LG+ ++ L + + + Sbjct: 5 TPFAAGSYLTTRNASQLQALKGQLNDLTNQLSSGQVSQTYGGLGSGRSTALSAQATLSAL 64 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + R + + L+ + + L L+ N+ + + Sbjct: 65 TGYAAGITAAQTRTNLAVTSLTQVATLGTSTGTMLQNGLQSVAANSVSG--RSTALANLQ 122 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPLNG 150 + + N + G YLF G N++ +P+ Sbjct: 123 TALDTLNESAAGNYLFGGSNTTTQPVVD 150 >gi|57241926|ref|ZP_00369866.1| flagellin B homolog (fla), putative [Campylobacter upsaliensis RM3195] gi|57017118|gb|EAL53899.1| flagellin B homolog (fla), putative [Campylobacter upsaliensis RM3195] Length = 751 Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 49/143 (34%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+SI M+ + KL ++ G + + E E + + Sbjct: 10 TNSIQNTMSGASA-----LNKLSVQLSLGMKIQDSYEDASIYIDNTRLEYELETLKQIKE 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 + S + S S L M K++++ + A L E V Sbjct: 65 ATSSAKEMTSNSMKALQDMVKLLENFKVKVTQAASDSNSQTSREAIAKELEKIKEQIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSINGQYLFAGAQLNHKPFDS 147 Score = 42.8 bits (99), Expect = 0.077, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 10/118 (8%) Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 D+M AV+ + D RN + L + I + +G NI+ Sbjct: 639 DLMIEAVLSGNMRANADGDNPRNTGMQGALERLDHLSDHINKLNTTMGAYHNNIDNVNTR 698 Query: 305 ---LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKI--EMSYMITTKLQKLSILNYL 357 L + T ++ + A ++ + ++ + S TT + +LS+LNY+ Sbjct: 699 VTFLGVNVQTLKTKVN-----DADYAETLMNLMQTQLAYQASMKATTTISQLSLLNYM 751 >gi|239828339|ref|YP_002950963.1| flagellar hook-associated protein FlgL [Geobacillus sp. WCH70] gi|239808632|gb|ACS25697.1| flagellar hook-associated protein 3 [Geobacillus sp. WCH70] Length = 301 Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 39/356 (10%), Positives = 106/356 (29%), Gaps = 62/356 (17%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ S + M + K E++ TG+ + + + + + Sbjct: 3 VTQSMLANNMLKHLSTSYANLGKYQEQLSTGKKINRPSDDPVVAMKGMAYRTNLTEVEQL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + S A L + +Q + +V + + + ++ E V Sbjct: 63 KRNFSEAYNWIENSDAALDKATQALQRIRELVVQAGNDTYEATQRQAISQEIKQLTEHLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 T AN +Y+F+G N+ + P+ + G + Sbjct: 123 TIANSKVGDKYIFNGTNTLQPPVQ----------------------------MNGTSITT 154 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 S+ + + K + + + TE + + +G Sbjct: 155 SNNTEEVKIELAKGIYIAVN--------------------VNPTEV--FHYDASQKGKGL 192 Query: 246 IMFVAVIGTEFLSKN-LTDGARNVL--TKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 + + + N L + +S + + + + + + E+ I Sbjct: 193 FSDLQSLANDLDDPNKTGKDINEYLGYIDQHISKLLSARAELGARMNRVELMEERI---- 248 Query: 303 VFLQNKNNIIDTY-ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + II +S + V+ L + + + ++ + +++++L Sbjct: 249 ----GQQEIIAQKMLSDNEDVDMERVITDLKVQESVHRAALAVGARIIQPTLVDFL 300 >gi|88799030|ref|ZP_01114611.1| Flagellin and related hook-associated protein [Reinekea sp. MED297] gi|88778257|gb|EAR09451.1| Flagellin and related hook-associated protein [Reinekea sp. MED297] Length = 418 Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 2/137 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST F+R L + K E++ +G+ +L+ +QE + + Sbjct: 5 VSTYWTFQRPVNDMLRLQSNLNKTSEQIASGKKMLSPADDPVGAARVLQLDQEIALLNQY 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVG-PLVILLEGKTDNNKFPINAGMLRDSYESF 124 + +L+ RL + L + ++Q + + ++ A L + + Sbjct: 65 ERNITLLDSRLEQEEGVLDGVTSVLQRVRELTVQAGNAAVYSESERQAIALELDERLKEL 124 Query: 125 VTFANMTDE-GQYLFSG 140 AN D G+YLFSG Sbjct: 125 FDLANSRDGSGEYLFSG 141 >gi|257457498|ref|ZP_05622666.1| flagellar hook-associated protein 3 [Treponema vincentii ATCC 35580] gi|257445121|gb|EEV20196.1| flagellar hook-associated protein 3 [Treponema vincentii ATCC 35580] Length = 414 Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 54/410 (13%), Positives = 116/410 (28%), Gaps = 58/410 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++ + + K++ ++ T + + ++ + Sbjct: 4 ISSNMQHSDSSYSVRRQESRLHKVNSQLSTQRRIQQLRDDPIAAGHSVRYKSLLTRLDRF 63 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + ++A + S I+Q + V G ++ A + + V Sbjct: 64 EKNAKTLNDQYKVAEAPMQSALSIMQRLRELSVAGATGTYTDSDLKKMAPEVDELLYELV 123 Query: 126 TFANM-TDEGQYLFSGINSSEKP---------------LNGYFTKDSLAKKSFDQMLQGF 169 AN + +G LF+G S +P + S+ K + F Sbjct: 124 QTANSFSADGTRLFAGTKSFTEPFEVVMGDIDGAGSAVITNVRYNGSIDTKQVESDELSF 183 Query: 170 LEENSKSLLAGQHLEVSSMNAQQMTDFI---------KQLEDKFSDDEYWANNWSNASDH 220 ++ N + +A +FI + + S + Sbjct: 184 MDANQAGNRVFWAERQTLFSATDARNFIVQQDSAIEVDGVTIPLIAGDNVYAIMSKINSS 243 Query: 221 NIKYRIKDTEGIDV----SANVNMRGIRDIMFVAVIGTEFLSK-------NLTDGAR--- 266 + + + + +RD V+ + L K NL D R Sbjct: 244 GAAVKASLDPVTNGMNIETTDARQLWLRDAGEGTVLSSLGLVKPQQRPPYNLADSVRVSG 303 Query: 267 -------------------NVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQN 307 L K+L +V + + + A G + L Sbjct: 304 GSLFDAVIAMRNAMYAGDHESLGGKVLGSVDGAIENLTARLAENGSRYERAEAALARLNM 363 Query: 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + S+ ++ A + L + S L K ++LNYL Sbjct: 364 QIPNVTGAESREADLDLTQAISDLKMYEYTHQASLSTVGNLYKNTLLNYL 413 >gi|119477946|ref|ZP_01618046.1| Flagellin and related hook-associated protein [marine gamma proteobacterium HTCC2143] gi|119448859|gb|EAW30101.1| Flagellin and related hook-associated protein [marine gamma proteobacterium HTCC2143] Length = 424 Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 52/131 (39%), Gaps = 1/131 (0%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 + L + + + ++ +G+ I++ QE + + + + + V RL+ Sbjct: 18 MQRLQQQTFETQAQIASGRRILAPSDDPVASAKIIQVNQELSRLDQYIDNADSVENRLNV 77 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT-DEGQYL 137 ++ + + ++ + + + + A L E ++ AN G+Y+ Sbjct: 78 AETQIEQVTTLLVRVRELTIQADALSVTQSDRQLIAKELDVRLEELLSIANTRDVNGEYI 137 Query: 138 FSGINSSEKPL 148 F+G +EKP Sbjct: 138 FAGYQGAEKPF 148 Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 45/113 (39%), Gaps = 2/113 (1%) Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 I ++ + A + L + L + + E ++ +G + + + L Sbjct: 312 IAKISEGMKSLGDSAVDQSAFDDLVAETLENLSAAEINMSEVKSEIGARQNTV-DSVRSL 370 Query: 306 QNKNNIIDTY-ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +I+ +S+ ++ A ++LS +E S ++ LS+ N+L Sbjct: 371 HQQIELINNKVLSEIRDLDYAEALSRLSIETFTLEASQQSFVRISSLSLFNFL 423 >gi|255322352|ref|ZP_05363498.1| bacterial flagellin domain protein [Campylobacter showae RM3277] gi|255300725|gb|EET79996.1| bacterial flagellin domain protein [Campylobacter showae RM3277] Length = 748 Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 55/165 (33%), Gaps = 4/165 (2%) Query: 24 KDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 K KL+ ++ +G + + + + E + + + S + L Sbjct: 21 KALYKLNTQISSGLKIQNSFEDSSVYNDGMRLDYEVATLEQVQTATSKAQHFSKNTDKAL 80 Query: 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINS 143 ++ ++ LV A L+ V AN + GQ+LF+G Sbjct: 81 GEFKQQLETFKTKLVQGANEIHSQTSREAIANDLQGIKNHLVNIANTSINGQFLFAGSAI 140 Query: 144 SEKPLNG----YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + KP+NG YF K + +N L G+ + Sbjct: 141 NTKPINGDTNEYFGNAQTMKAVGGAQVNLTYNQNGYELFLGKDGD 185 >gi|253990120|ref|YP_003041476.1| flagellar hook-associated protein FlgL [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781570|emb|CAQ84733.1| flagellar hook-associated protein 3 (hap3) (hook-filament junctio protein) [Photorhabdus asymbiotica] Length = 321 Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 51/349 (14%), Positives = 124/349 (35%), Gaps = 36/349 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ ++++ + ++ ++ +GQ + + Q ++ + Sbjct: 3 VSTNVLYDQKMVSITTAQSKWMQQGAQLSSGQKVINPSDDPMAASQGVMVAQAESQNQQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + S +S + +S + +VQ++ LV + G + A L E V Sbjct: 63 MTARSFAKNSMSMQLSVVSKVVGVVQNVHESLVATVNGVLSDEDRNSLAIQLEGFKEQLV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N TD G+Y+F+G + KP +++ + Q L ++ N ++ + Sbjct: 123 NLGNTTDGNGRYIFAGYKTDVKPF-DESKSGAVSYQGGYQELTQKVDSNRAMIIGHTGEQ 181 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V F+ + + + N S+ ++ I Sbjct: 182 V----------FLSSTSNPVKEPDG------NPSESDVFKVIDMA--------------- 210 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + E + D A L K + L+ + +VLG+ + I++ Sbjct: 211 --IKSLKTPLEGADQKTRDDAVE-LLNKANRGARNALNNVSSVESVLGLQLREIDDLNSL 267 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ + +S+ + VE ++A + ++ SY ++ +S+ Sbjct: 268 GAERSLANKSRLSQLVDVEWNSAISNYYQQQAVLQASYKTFVDMKGMSM 316 >gi|153951331|ref|YP_001398131.1| flagellar hook-associated protein FlgL [Campylobacter jejuni subsp. doylei 269.97] gi|152938777|gb|ABS43518.1| flagellin family protein [Campylobacter jejuni subsp. doylei 269.97] Length = 750 Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+S+ M ++ +++ +G + + E E + + Sbjct: 10 TNSVNNSM-----GGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKE 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 S S + S L M K+++D + A L ES V Sbjct: 65 STSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSVNGQYLFAGSQVANKPFDS 147 Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 42/113 (37%) Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 D M AV+ + + RN + L + + + +G I+ Sbjct: 638 DSMIDAVLKGNMRADGNSADPRNTGMQGALERLDHLADHVSKLNTTMGAYHNTIDGVNTR 697 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + + S I V+ A L + + S +T + +LS+LNY+ Sbjct: 698 VNFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTTISQLSLLNYM 750 >gi|261856353|ref|YP_003263636.1| flagellar hook-associated protein 3 [Halothiobacillus neapolitanus c2] gi|261836822|gb|ACX96589.1| flagellar hook-associated protein 3 [Halothiobacillus neapolitanus c2] Length = 313 Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 114/353 (32%), Gaps = 44/353 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS +F + ++ ++ +E+ TG Q ++ + + + Sbjct: 3 VSTSMVFAQGLSNLQQQQSAMLQSQQEIATGVKLTNPAQDPVAFSTASDLSVLNSKQNQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + T ++ ++ L S+ ++Q + + + L ++ Sbjct: 63 STNIDNATGKIQVQESTLGSITTMLQSVRDVAIQANNAAQNGMSLSALTDQLDQLQKALA 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N TDE G+YLFSG + EKP +D Q +S S Sbjct: 123 GQMNATDERGEYLFSGTVAREKP--------------YDASGQLNPALDSTSPSFQNVTS 168 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V + Q + I Q + A NAS I I + + N Sbjct: 169 VKLAISDQQSVAINQPAGQIFQLSSSATTGGNAS---ILQVIDQLKTAITTQPAN----- 220 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + + ++ + + R +G + ++ + Sbjct: 221 ---------------------LQTIYQNAQKDIDAVMNQVTDARGSMGNALNTLSTAKND 259 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +N + +S + +A +L+ ++ + K+Q LS+ NY+ Sbjct: 260 NAAQNVLTQQTLSGLRDTDVASAITKLNQSYLNLQATQQSMVKIQSLSLFNYI 312 >gi|315932630|gb|EFV11561.1| flagellar hook-associated protein FlgL [Campylobacter jejuni subsp. jejuni 327] Length = 749 Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+S+ M ++ +++ +G + + E E + + Sbjct: 10 TNSVNNSM-----GGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKE 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 S S + S L M K+++D + A L ES V Sbjct: 65 STSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSVNGQYLFAGSQVANKPFDS 147 Score = 42.8 bits (99), Expect = 0.093, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 62/171 (36%), Gaps = 5/171 (2%) Query: 189 NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI-- 246 + + + + ++ S + N + ++ ID N+ I+D+ Sbjct: 582 SGTNIEISLSDSQSGHFPQPPFSTTSSVTNGPNFSFSANNSLVID---EPNVDIIKDLDS 638 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 M AV+ + + ++ RN + L + I + +G I + Sbjct: 639 MIDAVLKGNMRADSESEDPRNTGMQGALERLDHLADHISKLNTTMGAYHNTIEDVNTRST 698 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + S I V+ A L + + S +T + +LS+LNY+ Sbjct: 699 FLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTTISQLSLLNYM 749 >gi|157415144|ref|YP_001482400.1| flagellar hook-associated protein FlgL [Campylobacter jejuni subsp. jejuni 81116] gi|157386108|gb|ABV52423.1| putative flagellin [Campylobacter jejuni subsp. jejuni 81116] gi|307747787|gb|ADN91057.1| Flagellin family protein [Campylobacter jejuni subsp. jejuni M1] Length = 749 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+S+ M ++ +++ +G + + E E + + Sbjct: 10 TNSVNNSM-----GGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKE 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 S S + S L M K+++D + A L ES V Sbjct: 65 STSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSVNGQYLFAGSQVANKPFDS 147 Score = 42.8 bits (99), Expect = 0.094, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 62/171 (36%), Gaps = 5/171 (2%) Query: 189 NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI-- 246 + + + + ++ S + N + ++ ID N+ I+D+ Sbjct: 582 SGTNIEISLSDSQSGHFPQPPFSTTSSVTNGPNFSFSANNSLVID---EPNVDIIKDLDS 638 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 M AV+ + + ++ RN + L + I + +G I + Sbjct: 639 MIDAVLKGNMRADSESEDPRNTGMQGALERLDHLADHISKLNTTMGAYHNTIEDVNTRST 698 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + S I V+ A L + + S +T + +LS+LNY+ Sbjct: 699 FLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTTISQLSLLNYM 749 >gi|90418259|ref|ZP_01226171.1| putative flagellin protein [Aurantimonas manganoxydans SI85-9A1] gi|90337931|gb|EAS51582.1| putative flagellin protein [Aurantimonas manganoxydans SI85-9A1] Length = 343 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 121/352 (34%), Gaps = 21/352 (5%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I+T++ +N + + + TG A + + + Sbjct: 2 TSINTNTSAMTALQSLSMINSNLDQTQNRISTGYRVGAASDNAAYWSIATTMRSDNKALG 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ +++ +V ++ LV E D NK L++ S Sbjct: 62 AVEDALGLGQAKVDTAYTGMNAAIDVVDEIKVKLVAAKEPGVDRNKIQSEIAELQNQLSS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 T A+ + E F+ + + K + F + S S + + L Sbjct: 122 IATSASFSGENWLSFNDVEGTSKSVVASFNRSSAGAVSVGTIDID------TAGLKLFGD 175 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 S++ A + I + + + S D I + G+D+S + Sbjct: 176 NSSAVPATLYKNGILDIRTLGTTILDNDGDVSTLGDQL----ILNVSGLDISTTALNQAK 231 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + + + ++ D + KM++ V+ L + + LG ++ ++ + Sbjct: 232 VNAATGEAVAGQPNYLSVDD-----VLSKMITNVETALGKMTTAASNLGAAKSRMDIQSE 286 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ N + I+ + + + +L L + ++ +Q LSI N Sbjct: 287 FVSNLRDSIEKGVGTLVDADMTEESTRLKALQTQQQLG------VQALSIAN 332 >gi|315927562|gb|EFV06895.1| bacterial flagellin family protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 659 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+S+ M ++ +++ +G + + E E + + Sbjct: 10 TNSVNNSM-----GGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKE 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 S S + S L M K+++D + A L ES V Sbjct: 65 STSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSVNGQYLFAGSQVANKPFDS 147 >gi|313903611|ref|ZP_07837001.1| flagellar hook-associated protein 3 [Thermaerobacter subterraneus DSM 13965] gi|313466164|gb|EFR61688.1| flagellar hook-associated protein 3 [Thermaerobacter subterraneus DSM 13965] Length = 295 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 17/140 (12%), Positives = 37/140 (26%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 + + ++ +G+ L + + L Sbjct: 16 LRRAQQRLSTFQNQLASGKRVQRPSDDPVATVDSLRLRARLAEVERLRANAQDARDWLEM 75 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 + + L +I+Q V G ++ ++ + + AN T YLF Sbjct: 76 TDSALDRATQILQRARELAVRAASGTLPDSSLQAIQAEVQQLQDHLLEVANSTLGDSYLF 135 Query: 139 SGINSSEKPLNGYFTKDSLA 158 G + + P S Sbjct: 136 GGFGTQQPPFVADPASPSGV 155 Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 21/206 (10%), Positives = 66/206 (32%), Gaps = 6/206 (2%) Query: 153 TKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN 212 + + D LQ E + + S++ + + F D + Sbjct: 94 AVRAASGTLPDSSLQAIQAEVQQLQDHLLEVANSTLGDSYLFGGFGTQQPPFVADPASPS 153 Query: 213 NWS-NASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTK 271 + + I+ + + ++ + ++ + +++L ++ Sbjct: 154 GVTYQGINGPIQREVAPGTTLTINVPGDAAFDPAFAALSGLQVALQNRDL-----QAVSA 208 Query: 272 KMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQL 331 ++ + Q L G++ RA +G I + + +S + +L Sbjct: 209 TGIAALDQALDGLLRFRAEVGAKVNRIELGLYRMDEIRVDTEQLLSGVEDADIAETAMRL 268 Query: 332 STLINKIEMSYMITTKLQKLSILNYL 357 S + M ++ + +++++L Sbjct: 269 SVSQAAYRAALMAGARIVQPTLMDFL 294 >gi|160939639|ref|ZP_02086987.1| hypothetical protein CLOBOL_04531 [Clostridium bolteae ATCC BAA-613] gi|158437430|gb|EDP15194.1| hypothetical protein CLOBOL_04531 [Clostridium bolteae ATCC BAA-613] Length = 327 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 42/353 (11%), Positives = 113/353 (32%), Gaps = 30/353 (8%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + N + D + ++ + + ++ + A + + E Sbjct: 3 ITENMMTSTYNRNLQRNISDLASSNLKLSSKRQYNHVSEDPATASKAFAIRDQIARSEEH 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L T+ +++ ++ I++ + G + + A L E + Sbjct: 63 ISVVKNARGELDTADSNIVTLNSILETVYEKATKA-GGASSQDSMDAIAEELGGLKEEIL 121 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N ++LFSG ++SE P + L V Sbjct: 122 QTMNAKYGDKFLFSGSSNSEAPFT----------------------VDGDGNLLFNGKPV 159 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI-R 244 + + + + + + D + S + +I + + + G+ Sbjct: 160 DAYDKNDPDTYFDENKPVYLD-IGFGTYASGTNTAKTGIKISTSGVDVLGYGKDENGLPN 218 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 ++ + E L +GA + L++ +++ S I + LG EK ++ Sbjct: 219 NLYSLIGKVEEQLRGGDKEGAMDTLSQ-----LKKKQSNISIATSELGTREKLLDRTEDR 273 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L+ + + V+ T + ++ + + + SI +++ Sbjct: 274 LETGLINLQKSQTDLESVKIETEAINNKSCETAWMITLQLGSSIIPPSIFDFM 326 >gi|90021848|ref|YP_527675.1| flagellin-like protein [Saccharophagus degradans 2-40] gi|89951448|gb|ABD81463.1| flagellin-like protein [Saccharophagus degradans 2-40] Length = 532 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 2/189 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS+ IF N + N+ VK E++ TG+ T I++ +E +I + Sbjct: 3 ISSLQIFNIANSGMADANQAMVKTQEQLSTGKRVSTPSDDPVASTKIIQLTEELANINQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKT-DNNKFPINAGMLRDSYESF 124 ++ L + ++ L ++ ++ M V T ++ A + E Sbjct: 63 GINSDLAENSIVLQESALEAINNLIVRMQELAVQAGNNATLGPTEYKALAAEVDSRLEEL 122 Query: 125 VTFANM-TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + N G Y+F G S+ +P +G + Q + Sbjct: 123 QSLLNTKGPGGDYIFGGYRSTTEPFSGTASTGFSYNGDEGQKFVKIANNTHIAASDSGKK 182 Query: 184 EVSSMNAQQ 192 + + + Sbjct: 183 IFVDIPSAE 191 Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 18/171 (10%), Positives = 54/171 (31%), Gaps = 2/171 (1%) Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKD--TEGIDVSANVNMRG 242 M ++ S + A ++A+ + + I + A Sbjct: 358 AVDATGFNMPAGLQITLSNGSANTNAALGVTSATQSVSSGGVTAVAGDRIFIEATNKQDV 417 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 + + ++ + + + L + + I + LG I+ R Sbjct: 418 LTTLAQMSESMKTYEGGTEDRRSIEKVIASTLKNLSNAQTSISNVTSELGARYNTIDSTR 477 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + +I+ +++ V+ A +LS ++ + ++ +L++ Sbjct: 478 SLHLDSEVVINKFLADLRDVDYAEAATRLSVETLVLQAAQSSFVRVSQLTL 528 >gi|71278519|ref|YP_268229.1| flagellar hook-associated protein FlgL [Colwellia psychrerythraea 34H] gi|71144259|gb|AAZ24732.1| flagellar hook-associated protein FlgL [Colwellia psychrerythraea 34H] Length = 406 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 56/405 (13%), Positives = 124/405 (30%), Gaps = 54/405 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS + + +L + + D E + +G+ ++ + + I + Sbjct: 3 VSTSQFYLQSALLMNQKSADVNNQMEHLSSGKRVLTAKDDAVSYGTLSGFNDDLASIEKY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++ S + + + ++ +++ G+ N A +R + + Sbjct: 63 KRNITMAENHNSMQEVIFADAETLLDKFKQDMLLANNGRMSNEDLQSIADQMRHGLDQLI 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLN-------GYFTK-------------------DSLA 158 N DE G Y+FSG + +KP + Y A Sbjct: 123 DLGNSQDEKGDYIFSGFQTQQKPFSQQVDGSVDYNGDKGVNELQVAKNIQIPTNQTGDAA 182 Query: 159 KKSFDQMLQGFLEENSKSLLAGQHLEVSSMNA-----------------QQMTDFIKQ-- 199 + D + F + + V S N +T+++ Sbjct: 183 FLNIDNAIGDFTATYPTVPVNTSGVAVESANVVDRNTYNVSTGPHTFSFDPITNYLTVTD 242 Query: 200 ---LEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR---GIRDIMFVAVIG 253 S I + S +N + I + + A+ Sbjct: 243 STLPIPAVVFPPAPYVAGQTISFDGIDVTLSGNPLPGDSFVINEKQNISIFETLNNAISW 302 Query: 254 TEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF-LQNKNNII 312 E + V +L + ++ I +RA GI + + ++ L + NI Sbjct: 303 AEQGVVSTNQEQHQVDYNTVLDQLSSAMNHIYSRRADAGIRLQALENQQSKHLDVELNIS 362 Query: 313 DTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S ++ A ++ + S +K+Q L++ NY+ Sbjct: 363 KGK-SSIEDLDFAKAISEFEQSKIALTASQQTFSKVQGLTLFNYI 406 >gi|330861097|emb|CBX71364.1| flagellar hook-associated protein 3 [Yersinia enterocolitica W22703] Length = 373 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 115/350 (32%), Gaps = 32/350 (9%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS ++++ ++ +++ TG+ + + Q ++ + Sbjct: 49 LSTSMLYQQNMQGVTNAQSLWMQSGQQLSTGKRVVNPSDDPMAASQAVMVSQSQSENNQY 108 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + S LS +Q + ++ + ++ A L+ + + Sbjct: 109 TLARSFARQSSSLETTVLSQATSTIQSIQSLIIGAAKDSLSDDDRASMATQLQGLKDQLL 168 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F G S + P T + D +Q ++ N + Sbjct: 169 NQANSTDGNGRYMFGGFQSDKAPFAVSNT-GEVTYVGGDVAIQQRVDSNRTMTVGHTGSS 227 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDT-EGIDVSANVNMRGI 243 V + + N N + I +T + + S ++G Sbjct: 228 V---------------FMALTSNATPEPNDVNGDPVAAESNIFNTIDTVLKSLKTPLQGT 272 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 R E K + + L+ ++ +A +G + ++ Sbjct: 273 RGXRVKQQASDEM--------------DKGIRGMANSLNNVLSVQAEIGTQLQELDSLDS 318 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ I +S V+ ++A + ++ SY T +Q LS+ Sbjct: 319 LGSDRTLINKQRLSDLQDVDWNSAISSYVMQQAALQASYTTFTNMQGLSL 368 >gi|260772281|ref|ZP_05881197.1| flagellar hook-associated protein FlgL [Vibrio metschnikovii CIP 69.14] gi|260611420|gb|EEX36623.1| flagellar hook-associated protein FlgL [Vibrio metschnikovii CIP 69.14] Length = 397 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 53/396 (13%), Positives = 131/396 (33%), Gaps = 47/396 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGAR---VTSILEWEQEKNHI 62 IS+ ++ + + ++ +G+ L G I Q++ + Sbjct: 5 ISSFHNYQSVQNDLRRQENKVHHNQAQLASGKKL---LSAGDNPLATHYIQNVTQQEEQL 61 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + L + LV RL + +S+ ++ ++ ++ G A +++ Sbjct: 62 RQYLDAIVLVRNRLEHQEVIISNAEEFTDKAKRMVMEMINGSLSPEDRETQARQIQEIAN 121 Query: 123 SFVTFANMTDE-GQYLFSGINSSEKPL------------NGYF--------------TKD 155 +F+ AN+ DE G ++F+G +P + Y T Sbjct: 122 NFLNLANVQDETGNFIFAGTRPKNQPFFRDNQGNVTYYGDDYQRKMRISNNLEMPFNTPG 181 Query: 156 SLAKKSFDQMLQGFLEENSKSLLAGQHLEVS-----SMNAQQMTDFIKQLEDKFS----- 205 + + F E + + LE + NA F+ L F+ Sbjct: 182 NQMFMDINNPFGDFEPEYALQEGSELLLERATNSDDGDNASYTVTFVDMLNGGFAYQLER 241 Query: 206 -DDEYWANNW---SNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNL 261 + N++ + + IK + S +N R + E+ ++ Sbjct: 242 DGEVVEVNDFDPRTGVQYQGLTINIKGSITAGDSITLNPRKTFTVFDSFKKAIEYSKGSV 301 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 +D + ++ + + + R+ +G ++ + ++ + S+ Sbjct: 302 SDASTTGKLHQITEELHTAFIHLNQVRSDVGARLSTLDLQEDQHEDFKISLARSKSQFED 361 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A + + ++ S + K + L++ NYL Sbjct: 362 LDYSQAVIEFNENSRALQASQLAFGKAKDLTLFNYL 397 >gi|309798077|ref|ZP_07692452.1| flagellar hook-associated protein 3 [Escherichia coli MS 145-7] gi|308118360|gb|EFO55622.1| flagellar hook-associated protein 3 [Escherichia coli MS 145-7] Length = 249 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 64/163 (39%), Gaps = 5/163 (3%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQ 164 AN TD G+Y+F+G + P + Y K+ D Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDA 166 >gi|325916940|ref|ZP_08179184.1| flagellar hook-associated protein 3 [Xanthomonas vesicatoria ATCC 35937] gi|325536843|gb|EGD08595.1| flagellar hook-associated protein 3 [Xanthomonas vesicatoria ATCC 35937] Length = 401 Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 60/398 (15%), Positives = 119/398 (29%), Gaps = 44/398 (11%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T ISTS ++ + +L ++ +GQ + + ++ Sbjct: 1 MTDRISTSMMYSQSIASMGAKQTRLNQLESQLSSGQRLVTAKDDPVAAGTAVGLDRALAA 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + V RL + L+ + + + + A L Sbjct: 61 ITRFGENANNVQNRLGLQENVLARAGDAMARVNELTIQANSSALAPDDRKAIASELSSLR 120 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPL----NGYFTKDSLAKKSFDQMLQGFLEENSKS 176 +S V+ AN TD G+YLF G P G +K + F+ + Sbjct: 121 DSMVSLANSTDGTGRYLFGGTADGSAPFIKSNGGVTYNGDQTQKQVEVAPDTFVSDTLPG 180 Query: 177 LLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWS-NASDHNIKYRIKDTEGIDVS 235 + + D A+ S N S +++++ +T + S Sbjct: 181 SEIFMRIRTGDGTVDAHANTANTGTGLLLDFSRDASTGSWNGSSYSVQFTAANTYEVRDS 240 Query: 236 ANV-------------NMRGIRDIMFVAV----------------------IGTEFLSKN 260 N G+R + A + S Sbjct: 241 TNAVVSTGTYKDGADITAAGLRMRISGAPAVGDSFQIGASTTKDVFSTIDDLVGALNSDA 300 Query: 261 LTDGARNVLTK---KMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 LT + + + + Q S +I+ RA G I+ L++ + T +S Sbjct: 301 LTQPQKATMINTLQTSMRDIAQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLS 360 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ +A Q ++ + I ++Q S+ N Sbjct: 361 SIRDLDYASAIGQYQLEKASLQAAQTIFQQMQSSSLFN 398 >gi|57237716|ref|YP_178964.1| flagellar hook-associated protein [Campylobacter jejuni RM1221] gi|57166520|gb|AAW35299.1| flagellin family protein [Campylobacter jejuni RM1221] gi|315058327|gb|ADT72656.1| Flagellar hook-associated protein flgL [Campylobacter jejuni subsp. jejuni S3] Length = 750 Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+S+ M ++ +++ +G + + E E + + Sbjct: 10 TNSVNNSM-----GGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKE 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 S S + S L M K+++D + A L ES V Sbjct: 65 STSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSVNGQYLFAGSQVANKPFDS 147 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 54/146 (36%), Gaps = 9/146 (6%) Query: 221 NIKYRIKDTEGIDVSAN-------VNMRGIRDI--MFVAVIGTEFLSKNLTDGARNVLTK 271 I +++ SAN N+ I+D+ M AV+ + + ++ RN + Sbjct: 605 TITSTVQNGPNFSFSANNSLTIDEPNVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQ 664 Query: 272 KMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQL 331 L + + + +G I + + + S I V+ A L Sbjct: 665 GALERLDHLADHVSKLNTTMGAYHNTIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMMNL 724 Query: 332 STLINKIEMSYMITTKLQKLSILNYL 357 + + S +T + +LS+LNY+ Sbjct: 725 MQVQLAYQASLKASTTISQLSLLNYM 750 >gi|222084878|ref|YP_002543407.1| flagellin C protein [Agrobacterium radiobacter K84] gi|221722326|gb|ACM25482.1| flagellin C protein [Agrobacterium radiobacter K84] Length = 325 Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 117/353 (33%), Gaps = 43/353 (12%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 + ++T+ + + +NKD + +++ +G + +++ ++ Sbjct: 2 SNVTTNRATSAALTVLRGVNKDLGVVQQQVTSGFRVGSASDDPTYWSMATTMRSDQSSLS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ + ++ IV + LV E TD + + L+D +S Sbjct: 62 TITDALGLGASKVDTASTAMDTVVSIVSQIRAKLVSAQEAGTDKSAVNTDIQQLKDQLQS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A FSG N + S + ++ F +S + Sbjct: 122 VTQSAA--------FSGEN--------WLYNTSTQADTQKSVISNFTRGSS------GQI 159 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + S+N + D AS + I R Sbjct: 160 SLVSINYDSSQTLMIDTAD--------------ASRGLLTKNIDANTLGTSDGTSTARNY 205 Query: 244 RDIMFVAVIGTEFLSK-NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 + + ++ +++D + M++ L+ + + LG+ + I+++ Sbjct: 206 YLLAADSGTAPTDGTEISISDSTTDAELTDMINVTNSILTSVTSADSTLGVMKSRIDDQS 265 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ ++ I T + + A A+ S L +M +Q LSI N Sbjct: 266 DYISKLSDGIKTSVGDLVDTNMEEASARQSALQTAQQMG------IQSLSIAN 312 >gi|170722884|ref|YP_001750572.1| flagellar hook-associated protein FlgL [Pseudomonas putida W619] gi|169760887|gb|ACA74203.1| flagellar hook-associated protein 3 [Pseudomonas putida W619] Length = 524 Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 58/144 (40%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ ++ + + +K +EE + + +L+ + + +A+ Sbjct: 3 ISTAQFYQTSAANYQRNYSNLIKTNEEASSFVRVNTAADDPVGAARLLQLGNQADMLAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + +T L+ ++ L+S+ I+ + + + + A L + + Sbjct: 63 KTNATNITNSLNQTETTLNSINTILTRVNELAIESGNAGYTDTERKAKAAELGQLEDQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL 148 + N D GQYLF+G ++ P Sbjct: 123 SLMNSRDENGQYLFAGSSTDTAPF 146 Score = 36.6 bits (83), Expect = 5.9, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 31/89 (34%), Gaps = 6/89 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNIN---EERVFLQNKNNIIDTYISKSIGVEQHT 326 ++ +Q G + +G K + L N+ + I S + T Sbjct: 436 LDSAIANIQSGQDALNTAVTDIGARGKALEIQQNTNESLSIANSTTQSSIRDS---DPAT 492 Query: 327 AHAQLSTLINKIEMSYMITTKLQKLSILN 355 +L+ ++ S ++ +LS+ N Sbjct: 493 VLVRLTQQQTLLQASQAAFARVSQLSLFN 521 >gi|188592124|ref|YP_001796722.1| flagellar hook-associated protein flgl [Cupriavidus taiwanensis LMG 19424] gi|170938498|emb|CAP63485.1| Flagellin, N-terminal. bacterial flagellin family [Cupriavidus taiwanensis LMG 19424] Length = 409 Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 68/187 (36%), Gaps = 1/187 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +++S+++++ + + +++ TG+S T L Q + + Sbjct: 3 VASSTLYQQGLASMNYQQGALMHIQQQLGTGRSILTPSDDPVGATRALGVSQAQAVNGQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 S + L+ + L S+ I Q++ LV G + A L Y + Sbjct: 63 ATSRNQANIALAAEENALDSVTTITQNIHTLLVQAGNGTMSDADRGSLATALEGLYNQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN D GQ+LF G S P + + Q+LQ + + G+ + Sbjct: 123 SLANSDDGNGQFLFGGTRSGSAPFTQSAGASTYIGDNGQQLLQVDVARQMPAGNTGREVF 182 Query: 185 VSSMNAQ 191 +S Sbjct: 183 MSVTGGA 189 >gi|68164539|gb|AAY87268.1| predicted flagellar-hook associated protein 3 [uncultured bacterium BAC17H8] Length = 288 Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 44/347 (12%), Positives = 106/347 (30%), Gaps = 69/347 (19%) Query: 18 LTKELNKDSVKLHEEMVTGQSS-----DYGLQLGARVTSILEWEQEKNHIAERLHSN-SL 71 + D + + + TG++ D + + + ++K + ER ++N Sbjct: 3 TLNRITGDIQGIQQRIATGRNILKTSDDPA------AGAKISFTKDKKIMLERYNANIDR 56 Query: 72 VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT 131 RLS +++ + ++Q + V + A +R+ + ++ AN Sbjct: 57 AQNRLSQAESAVGIGVNLLQRIYELAVQARNDTNNAGDRATIAMEVRNLKDQMLSLANSR 116 Query: 132 D-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNA 190 D GQY+FSG KP F+ + + ++ + ++ Sbjct: 117 DTNGQYIFSGYKVDTKP---------------------FVADENGDIIHAGDRGIHTLQI 155 Query: 191 QQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVA 250 L+ ++ R+ E ++ + Sbjct: 156 SDNQRIATSLDGA-----------------DVFLRVPQEETVET----------VFATID 188 Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 + S + D + V L Q+ LG + +R + Sbjct: 189 AMIASLESGKMEDEH--------IGKVNIALEHFSLQQTKLGSQMNRADLQRGVNDKRLL 240 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +++ IS + +L + + K+ + ++ NY+ Sbjct: 241 LMNEDISNLEDADIAKLVTELQAKLVSRNAAQQSFIKIAQDNLFNYI 287 >gi|330501144|ref|YP_004378013.1| flagellar hook-associated protein FlgL [Pseudomonas mendocina NK-01] gi|328915430|gb|AEB56261.1| flagellar hook-associated protein FlgL [Pseudomonas mendocina NK-01] Length = 305 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 1/167 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ S I M+ + + KL ++M T + +L ++E++ + + Sbjct: 4 ITNSQITSMMHNSMNASSAELGKLMQQMATNKRLLLPSDDPIASVRVLRVQREESSLEQF 63 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + V+ LST +A+L S + ++ L+ G + AG L ++ Sbjct: 64 RKNIANVSGSLSTQEANLKSTSDAMLNVRDLLLWAANGSNTSEDLSAMAGELSIIEDTIF 123 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLE 171 +FAN+ DE G+YLFSG S L + + D+ Q + Sbjct: 124 SFANVRDEEGRYLFSGTLSDTPALAFDTATQTYSVTGNDKHRQAAVA 170 >gi|330892702|gb|EGH25363.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. mori str. 301020] Length = 211 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +E N + + +K EE+ +G + +L+ Q+ + + + Sbjct: 3 ISTTQFYESTNTNYQRTYSNVLKTSEEVSSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + S+ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQTAREVIVSAGNGAYTDSDRLAKAAELKQYQSQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+F+G SS P Sbjct: 123 GLMNSQDSNGQYIFAGSKSSAPP 145 >gi|88597597|ref|ZP_01100831.1| flagellin family protein [Campylobacter jejuni subsp. jejuni 84-25] gi|88190189|gb|EAQ94164.1| flagellin family protein [Campylobacter jejuni subsp. jejuni 84-25] Length = 750 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+S+ M ++ +++ +G + + E E + + Sbjct: 10 TNSVNNSM-----GGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKE 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 S S + S L M K+++D + A L ES V Sbjct: 65 STSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSVNGQYLFAGSQVANKPFDS 147 Score = 39.3 bits (90), Expect = 0.96, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 60/171 (35%), Gaps = 5/171 (2%) Query: 189 NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI-- 246 + + + + + + + N + ++ ID N+ I+D+ Sbjct: 583 SGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSLTID---EPNVDIIKDLDS 639 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 M AV+ + + ++ RN + L + + + +G I Sbjct: 640 MIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNTTMGAYHNTIEGVNTRTS 699 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + I + S I V+ A L + + S +T + +LS+LNY+ Sbjct: 700 FLSVNIQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTTISQLSLLNYM 750 >gi|86150218|ref|ZP_01068445.1| flagellin family protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|218562507|ref|YP_002344286.1| lagellar hook-associated protein FlgL [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839334|gb|EAQ56596.1| flagellin family protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|112360213|emb|CAL35008.1| putative flagellin [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315929505|gb|EFV08699.1| putative flagellin [Campylobacter jejuni subsp. jejuni 305] Length = 750 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+S+ M ++ +++ +G + + E E + + Sbjct: 10 TNSVNNSM-----GGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKE 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 S S + S L M K+++D + A L ES V Sbjct: 65 STSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSVNGQYLFAGSQVANKPFDS 147 Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 60/171 (35%), Gaps = 5/171 (2%) Query: 189 NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI-- 246 + + + + + + + N + ++ ID N+ I+D+ Sbjct: 583 SGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSLTID---EPNVDIIKDLDS 639 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 M AV+ + + ++ RN + L + + + +G I Sbjct: 640 MIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNTTMGAYHNTIEGVNTRTS 699 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + S I V+ A L + + S +T + +LS+LNY+ Sbjct: 700 FLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTTISQLSLLNYM 750 >gi|284926121|gb|ADC28473.1| flagellar hook-associated protein FlgL [Campylobacter jejuni subsp. jejuni IA3902] Length = 750 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+S+ M ++ +++ +G + + E E + + Sbjct: 10 TNSVNNSM-----GGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKE 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 S S + S L M K+++D + A L ES V Sbjct: 65 STSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSVNGQYLFAGSQVANKPFDS 147 Score = 37.8 bits (86), Expect = 2.6, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 60/171 (35%), Gaps = 5/171 (2%) Query: 189 NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI-- 246 + + + + + + + N + ++ ID N+ I+D+ Sbjct: 583 SGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSLTID---EPNVDIIKDLDS 639 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 M AV+ + + ++ RN + L + + + +G I Sbjct: 640 MIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNTTMGAYHNTIEGVNTRTS 699 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + S I V+ A L + + S +T + +LS+LNY+ Sbjct: 700 FLSVNVQSIKSNVIDVDYGEAMINLMQVQLAYQASLKASTIISQLSLLNYM 750 >gi|311031939|ref|ZP_07710029.1| flagellar hook-associated protein FlgL [Bacillus sp. m3-13] Length = 292 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 101/357 (28%), Gaps = 66/357 (18%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T + + L+ +K KL E++ TG+ + + Sbjct: 1 MRVT--QSMLTQNSLRQLSTSYSK-MGKLMEQLSTGKKISRPSDDPVVAMKGMYYRTNLT 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + S + S+A L +Q ++ +V A + Sbjct: 58 ELEQYKRNLSESYAWMENSEAALDHVQSVMHRARELVVQGSNDTYSPEDRQAMAKEIEQL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 FV AN G+Y+F+G + + S F E S+ + Sbjct: 118 KHDFVQVANTQVAGKYIFNGTAIDKPRITDANDPTS-----VSTENSPFEVEVSRGIKLQ 172 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 ++ ++ + M + L+ E D Sbjct: 173 SNINSENVFNKDMMEIWNGLQSAL-------------------------ETSDT------ 201 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 ++D+M + I +R+ LG + Sbjct: 202 DALKDLM---------------------------GRFDKSADTISAERSELGARYNRLEM 234 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + +S + + L++ + S + ++ + S+L++L Sbjct: 235 VDNRIGYQEVVATRILSDNEDADIEKVITDLTSQESVHRASLGVGARVIQPSLLDFL 291 >gi|293414376|ref|ZP_06657025.1| flagellar hook-associated protein 3 [Escherichia coli B185] gi|291434434|gb|EFF07407.1| flagellar hook-associated protein 3 [Escherichia coli B185] Length = 272 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 64/163 (39%), Gaps = 5/163 (3%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQ 164 AN TD G+Y+F+G + P + Y K+ D Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDA 166 >gi|205356372|ref|ZP_03223137.1| putative flagellin [Campylobacter jejuni subsp. jejuni CG8421] gi|205345757|gb|EDZ32395.1| putative flagellin [Campylobacter jejuni subsp. jejuni CG8421] Length = 750 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+S+ M ++ +++ +G + + E E + + Sbjct: 10 TNSVNNSM-----GGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKE 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 S S + S L M K+++D + A L ES V Sbjct: 65 STSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSVNGQYLFAGSQVANKPFDS 147 Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 60/171 (35%), Gaps = 5/171 (2%) Query: 189 NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI-- 246 + + + + + + + N + ++ ID N+ I+D+ Sbjct: 583 SGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSLTID---EPNVDIIKDLDS 639 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 M AV+ + + ++ RN + L + + + +G I Sbjct: 640 MIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNTTMGAYHNTIEGVNTRTS 699 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + S I V+ A L + + S +T + +LS+LNY+ Sbjct: 700 FLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTTISQLSLLNYM 750 >gi|261409643|ref|YP_003245884.1| flagellar hook-associated protein 3 [Paenibacillus sp. Y412MC10] gi|261286106|gb|ACX68077.1| flagellar hook-associated protein 3 [Paenibacillus sp. Y412MC10] Length = 298 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 85/306 (27%), Gaps = 59/306 (19%) Query: 52 ILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFP 111 L + E + + + L + + + +I Q +V + G Sbjct: 51 SLRYRSELSFNDQYQKNADTALSWLEYTDTVIGQVNEISQRANELIVNAVNGTNPQEGLD 110 Query: 112 INAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLE 171 L+ YE ++ N +Y+F+G + + P + QG Sbjct: 111 AINIELKQIYEQLISLGNSKFNDKYIFNGQLTDQAPYDKVLAPT-----------QGTDL 159 Query: 172 ENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEG 231 ++ Q + ++ FS I R++ Sbjct: 160 HGITYKFTEGATLNINVTGQDVFGEPSDPDNLFS----------------ILNRVQAALT 203 Query: 232 IDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVL 291 ID A NL+ R + S + + + L Sbjct: 204 IDDKAAARTE----------------LDNLSS--RLSKINEARSEIGAKTNRVDLIFNRL 245 Query: 292 GISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 G E N+ +Q K + +L + + S + K+ ++ Sbjct: 246 GDLEINLT----AMQAKV----------EDADYAETIMKLKQDESVYQASLATSAKIMQI 291 Query: 352 SILNYL 357 S+L+YL Sbjct: 292 SLLDYL 297 >gi|148926573|ref|ZP_01810255.1| putative flagellin [Campylobacter jejuni subsp. jejuni CG8486] gi|145845267|gb|EDK22361.1| putative flagellin [Campylobacter jejuni subsp. jejuni CG8486] Length = 750 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+S+ M ++ +++ +G + + E E + + Sbjct: 10 TNSVNNSM-----GGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKE 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 S S + S L M K+++D + A L ES V Sbjct: 65 STSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSVNGQYLFAGSQVANKPFDS 147 Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 60/171 (35%), Gaps = 5/171 (2%) Query: 189 NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI-- 246 + + + + + + + N + ++ ID N+ I+D+ Sbjct: 583 SGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSLTID---EPNVDIIKDLDS 639 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 M AV+ + + ++ RN + L + + + +G I Sbjct: 640 MIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNTTMGAYHNTIEGVNTRTS 699 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + S I V+ A L + + S +T + +LS+LNY+ Sbjct: 700 FLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTTISQLSLLNYM 750 >gi|73539457|ref|YP_299824.1| flagellar hook-associated protein FlgL [Ralstonia eutropha JMP134] gi|72122794|gb|AAZ64980.1| Flagellin, N-terminal [Ralstonia eutropha JMP134] Length = 404 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 54/402 (13%), Positives = 114/402 (28%), Gaps = 50/402 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++TS+++++ + + +++ TG+ T L Q + Sbjct: 3 VATSTLYQQGLASMNMQQSSLLHIQQQLGTGRKVLTPSDDPVAATRALGVTQASAINDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 S + L + LS++ + Q++ LV G + A L+ YE + Sbjct: 63 TTSRNQANISLGMEENTLSTVTTVTQNIQTLLVQAGNGTLSDVDRASLATALKGQYEQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL------------------------------------ 148 AN D GQYLF G S P Sbjct: 123 GLANADDGNGQYLFGGTLSGSPPFVQGGGSVQYIGNTEQQQYQVDVARQMPAGSNGREVF 182 Query: 149 ------NGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLED 202 GY K + A Q + + L ++ M I Sbjct: 183 QSVQGSAGYVLKGNSANTGSATYGQVSTTDPTNPLYGTPLTLTFDDSSGSMQYTITDPSG 242 Query: 203 KFSDDE--YWANNWSNASDHNI-----KYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTE 255 + + A + DT I ++ ++ V Sbjct: 243 NPVGGTPLAYTDPGQIAVAGVTFTVKGAPKTGDTISIQPASQAGTDMFANLKSVIDALDA 302 Query: 256 FLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 + + N + + L ++ RA +G + ++ N+ Sbjct: 303 PVHSDADSANLNNVIATGIRQFSNSLDNVLTVRASVGSRMQELDALDTIGTNRGLNYTET 362 Query: 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S ++ +A + ++ + ++Q +++ YL Sbjct: 363 LSGLQDLDYASAITEYYQRQTALQGAQQSFMQIQGMNLFKYL 404 >gi|121612548|ref|YP_001000562.1| flagellin family protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167005495|ref|ZP_02271253.1| flagellar hook-associated protein FlgL [Campylobacter jejuni subsp. jejuni 81-176] gi|87249343|gb|EAQ72303.1| flagellin family protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 750 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+S+ M ++ +++ +G + + E E + + Sbjct: 10 TNSVNNSM-----GGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKE 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 S S + S L M K+++D + A L ES V Sbjct: 65 STSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSVNGQYLFAGSQVANKPFDS 147 Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 60/171 (35%), Gaps = 5/171 (2%) Query: 189 NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI-- 246 + + + + + + + N + ++ ID N+ I+D+ Sbjct: 583 SGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSLTID---EPNVDIIKDLDS 639 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 M AV+ + + ++ RN + L + + + +G I Sbjct: 640 MIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNTTMGAYHNTIEGVNTRTS 699 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + S I V+ A L + + S +T + +LS+LNY+ Sbjct: 700 FLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTTISQLSLLNYM 750 >gi|309390122|gb|ADO78002.1| flagellar hook-associated protein 3 [Halanaerobium praevalens DSM 2228] Length = 297 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 59/143 (41%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ S + + M K D L+E++ +G+ +V+ + ++ + N ++ Sbjct: 3 VTNSMMVQNMLDHLKNNMGDLNDLNEQLSSGKLFQTPSDAPIKVSESMNYKSQLNRNSQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L+T+++ L S K++Q + + + A +++ + + Sbjct: 63 QRNLNQAENWLNTTESALKSGTKVIQRARELTIKTANDSLTSGDRKMVAKEMKELRDELI 122 Query: 126 TFANMTDEGQYLFSGINSSEKPL 148 +N Y+FSG + KP Sbjct: 123 DISNAKLGDSYIFSGQKTDAKPF 145 >gi|332798815|ref|YP_004460314.1| flagellar hook-associated protein 3 [Tepidanaerobacter sp. Re1] gi|332696550|gb|AEE91007.1| flagellar hook-associated protein 3 [Tepidanaerobacter sp. Re1] Length = 296 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 96/310 (30%), Gaps = 59/310 (19%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 V ++ ++ I + + + ++ L++ ++Q + V + G Sbjct: 45 GVAMAIKLRRQIAAIQQYNSNAQDALTWMKDTETALTNTGDVLQRLDELTVQVANGTLTP 104 Query: 108 NKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ 167 + +++ + AN T +YLF G Y T K Sbjct: 105 DDREKILYEVKELKDQLFQEANSTSLDRYLFGG----------YSTNKPPFIK------- 147 Query: 168 GFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIK 227 + + + I++ D F + I+Y + Sbjct: 148 ------------------NDITGE-----IEKNPDTF--------------NGAIEYDLG 170 Query: 228 DTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQ 287 +E I ++ DI E L + L+ ++L+ ++ S +++ Sbjct: 171 QSERISINLTGYD-VFSDIFKA----VENLETAIEADDTEALSGQVLADIKNATSTVLKY 225 Query: 288 RAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTK 347 RA +G + + L +S ++ L + S + + Sbjct: 226 RAQIGARSNRLEATVLRLDANEVDYKAQLSNIEDIDLAQMITDLKMEESVYRASLSVGAR 285 Query: 348 LQKLSILNYL 357 + + S++++L Sbjct: 286 IIQPSLVDFL 295 >gi|301168513|emb|CBW28103.1| putative flagellar hook-associated protein 3 [Bacteriovorax marinus SJ] Length = 332 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 38/359 (10%), Positives = 118/359 (32%), Gaps = 34/359 (9%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVT----GQSSDYGLQLGARVTSILEWEQEK 59 + +S +S +N + L + T + SD + L Sbjct: 2 SRVSENSSSAALNFSLGKAKSKLEDLQMKGATLKDISRPSDNPIS----NVEALSITSNM 57 Query: 60 NHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 + + + L+ ++ L + ++ + + + A + Sbjct: 58 SDNKQYQRNADYALLHLNVTEKSLEQLTDLLVKAKEIAISQSSDFYNADVRKNIANEVNQ 117 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 ++ AN +Y+FSG ++ +P + + + ++ + F +L Sbjct: 118 LRNLALSIANKRVGQKYIFSGYSTLTQPFDVAGKYNGDKGHTTVEVAKDFFL--PLNLNG 175 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 + S + + +K++++ + +++ + + N Sbjct: 176 HEIFYSSDDTSDKNIHPLKEIKEP-----------------DTSKPVENKRELASTEGEN 218 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVL-TKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 I + S ++ + + + +L +S +I R +G ++ Sbjct: 219 ------FHKRDNIFAQLESLSVALETNDAVLIQNLLEEFDDSISRLITLRTRVGSITSSV 272 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + L+++N T SK + + + ++ + ++ +Y + L +++++L Sbjct: 273 MNSKSRLESENIEGATRKSKLVDADIAEVFSDITKHQSVLKTTYQSSQGLMNQNLMDFL 331 >gi|91224192|ref|ZP_01259455.1| flagellar hook-associated protein L [Vibrio alginolyticus 12G01] gi|269968151|ref|ZP_06182184.1| flagellar hook-associated protein 3 [Vibrio alginolyticus 40B] gi|91191103|gb|EAS77369.1| flagellar hook-associated protein L [Vibrio alginolyticus 12G01] gi|269827219|gb|EEZ81520.1| flagellar hook-associated protein 3 [Vibrio alginolyticus 40B] Length = 299 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 118/353 (33%), Gaps = 57/353 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS + + M + + + ++M TG+ +L ++E + IA+ Sbjct: 3 ISDNQFSQMMLHSLQSNSAGLGEALQQMSTGKRLTKLSDDPMASIKLLNLDRETSAIAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 ++ V LS+ + HL S+++ ++ M + G + L+ +S Sbjct: 63 KNNIENVKTTLSSQETHLDSIKESLKSMRDIALWGANGSLTDESRGGMITELKSYRDSIE 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + N DE G YLFSG + + +K S +++G ++ ++ G ++ Sbjct: 123 SSFNAQDEEGHYLFSGTKTDTAAV---------SKASGSYVIEGNSDKRVVTIAKGVTMD 173 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 S+M A+++ D HN+ +I S N Sbjct: 174 -SNMTAKEILDLGGG--------------------HNVLNQIDALIKEFESPTAN----- 207 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + +S + S ++ +G N++ Sbjct: 208 ---------------------FRAEVEASISAIDDTFSNVLGTMTEIGGRHNNLDLVGGA 246 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +D ++ A +LS + ++ + K+ LS+ + L Sbjct: 247 HSENKLFVDKVSGDLSALDYGEASVRLSNYMAALQATQASYVKIDGLSLFDRL 299 >gi|289803847|ref|ZP_06534476.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 274 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 68/179 (37%), Gaps = 5/179 (2%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++E+ + +KL E+M TG+ + + Q + ++ Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLFQAQAQNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S ++ LS + +Q +V G ++ A L+ + + Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 AN TD G+Y+F+G + P + GY + + D + + Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQQVDSARTMVIGHTGAQIFN 181 >gi|296535169|ref|ZP_06897391.1| flagellin domain protein [Roseomonas cervicalis ATCC 49957] gi|296264497|gb|EFH10900.1| flagellin domain protein [Roseomonas cervicalis ATCC 49957] Length = 361 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 39/345 (11%), Positives = 107/345 (31%), Gaps = 7/345 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + I+ S + L ++N+ +++ TG GA + + Sbjct: 1 MANSVITNSGAKVALQSL-NKINQQLDTTQKKVSTGYKVSDAKDDGAAYAVAQKVRADVT 59 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKI-VQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 + V L+++ + ++ D+ L L + D + Sbjct: 60 GLNSANDQLGGVNGLLTSTLKAVDTVSNTLATDVSNVLTKLSDSNLDAETRKQYTEQFKS 119 Query: 120 SYESFVTFA-NMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLL 178 + T + + G L S + PL G + ++ Q + S + Sbjct: 120 LAKQMNTTLQDASYNGTRLLSSTATD--PLTGNAYSGGSMAVTRNEKGQSYTVNESGATA 177 Query: 179 AGQHLEVSSMNAQQMTDFIKQLED-KFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSAN 237 + L ++ D + +N A+D + +D + Sbjct: 178 DQMSFTANISGGAVAAGATSGLVGVRYYDADADTDNLIEATDVVTGDAASTSGSLDDIVS 237 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGL-SGIIEQRAVLGISEK 296 ++ + ++ +V + T V+ ++ + + LG K Sbjct: 238 ISAGAAKALLQGSVQVDDGAGAKTTTAVDAVMVDGVVLKTFTAVKESSNAAQNQLGNDSK 297 Query: 297 NINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 ++ + + + + ++ + + + A+L+ L + +++ Sbjct: 298 FVSNQMTYNSARIDAMEEGLGSLVDADLAKESARLTALQTQQQLA 342 >gi|157376209|ref|YP_001474809.1| flagellar hook-associated protein FlgL [Shewanella sediminis HAW-EB3] gi|157318583|gb|ABV37681.1| flagellar hook-associated protein 3 [Shewanella sediminis HAW-EB3] Length = 396 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 52/396 (13%), Positives = 134/396 (33%), Gaps = 46/396 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +F + + + K+ +++ +G+ + I Q+ + + Sbjct: 3 ISTAQMFNQGITSVLDRQSATSKILDQLSSGKKVNTAGDDPVAAVGIDNLNQQNALVDQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T L+ +++ L + +K+V ++ + G +++ + A LR + + + Sbjct: 63 VKNIEYATNHLAITESKLGTAEKLVGSSRELVIRAVNGGLADSERQMIADELRGTLDELL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKD----------SLAKKSFDQMLQGFLEENS 174 + AN D G Y+FSG + + T + S + +++ Sbjct: 123 SVANTKDESGNYMFSGNETGTQAFAFDATGNIVYSGDNGVRQSVVASGVTIGTNIPGDSA 182 Query: 175 -KSLLAGQHLEVSSMNAQQMTDF------IKQLEDKFSDDEYWANNWSNASDHNIKYRIK 227 + +G ++ A Q DF I + ++ + + Sbjct: 183 FMNAPSGMGDYSANYLATQAGDFKVESAKITNPAVHVEQTYTFTMVGADLEIRDATNTLV 242 Query: 228 DTEG--------------------------IDVSANVNMRGIRDIMFVAVIGTEFLSKNL 261 TE +S N+ I + N Sbjct: 243 QTEVNFDSSNPIVYNGLEVKLDGMPAAGDSFSISPAANVSIFDTINEAITLLESPNKINT 302 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 G ++L+ + G++ I +R V G + K++ + + + + +S Sbjct: 303 PQGMAE--LAQVLNNIDSGVNQISIERGVAGNNLKSLESHNMTHVEEKVVNSSALSMLED 360 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ +A + + + +K+ +S+ +Y+ Sbjct: 361 LDYASAITEYEKQQLALNAVSNVFSKVGSVSLFDYI 396 >gi|86153224|ref|ZP_01071428.1| flagellar hook-associated protein FlgL, putative [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842950|gb|EAQ60161.1| flagellar hook-associated protein FlgL, putative [Campylobacter jejuni subsp. jejuni HB93-13] Length = 750 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+S+ M ++ +++ +G + + E E + + Sbjct: 10 TNSVNNSM-----GGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKE 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 S S + S L M K+++D + A L ES V Sbjct: 65 STSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSVNGQYLFAGSQVANKPFDS 147 Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 60/171 (35%), Gaps = 5/171 (2%) Query: 189 NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI-- 246 + + + + + + + N + ++ ID N+ I+D+ Sbjct: 583 SGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSLTID---EPNVDIIKDLDS 639 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 M AV+ + + ++ RN + L + + + +G I Sbjct: 640 MIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVNKLNTTMGAYHNTIEGVNTRTS 699 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + S I V+ A L + + S +T + +LS+LNY+ Sbjct: 700 FLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTTISQLSLLNYM 750 >gi|297521523|ref|ZP_06939909.1| flagellar hook-associated protein FlgL [Escherichia coli OP50] Length = 230 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 64/163 (39%), Gaps = 5/163 (3%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 ST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + T+++S ++ LS + +Q+ +V G ++ A ++ + + Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123 Query: 127 FANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQ 164 AN TD G+Y+F+G + P + Y K+ D Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDA 166 >gi|86152073|ref|ZP_01070285.1| flagellin family protein [Campylobacter jejuni subsp. jejuni 260.94] gi|315124382|ref|YP_004066386.1| flagellin family protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85840858|gb|EAQ58108.1| flagellin family protein [Campylobacter jejuni subsp. jejuni 260.94] gi|315018104|gb|ADT66197.1| flagellin family protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 750 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+S+ M ++ +++ +G + + E E + + Sbjct: 10 TNSVNNSM-----GGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKE 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 S S + S L M K+++D + A L ES V Sbjct: 65 STSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSVNGQYLFAGSQVANKPFDS 147 Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 60/171 (35%), Gaps = 5/171 (2%) Query: 189 NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI-- 246 + + + + + + + N + ++ ID N+ I+D+ Sbjct: 583 SGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSLTID---EPNVDIIKDLDS 639 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 M AV+ + + ++ RN + L + + + +G I Sbjct: 640 MIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNTTMGAYHNTIEGVNTRTS 699 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + S I V+ A L + + S +T + +LS+LNY+ Sbjct: 700 FLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTTISQLSLLNYM 750 >gi|253996312|ref|YP_003048376.1| flagellar hook-associated protein FlgL [Methylotenera mobilis JLW8] gi|253982991|gb|ACT47849.1| flagellar hook-associated protein 3 [Methylotenera mobilis JLW8] Length = 303 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 76/221 (34%), Gaps = 8/221 (3%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST++I++ L + KL +++ TGQ E Q K+ ++ Sbjct: 3 ISTNTIYQSGISKITNLQSEQTKLMQQIATGQRIASPSDDPVGAARAAELAQAKSANSKF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + +L+T +++L+S+ ++ + LV + + A L+ + E + Sbjct: 63 ADTRQTAQLKLNTLESNLTSVTNLMTSIQSSLVSAGNATYSDLERGFVAADLKTALEGLI 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL------NGYFTKDSLAKKSFDQMLQGFLEENSKSLL 178 AN D G YL+SG + P Y + D Q + + Sbjct: 123 GLANTKDASGNYLYSGFQTDTAPFVANATGAAYVGDTNNQSLQVDTSRQMVVNATGDDVF 182 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASD 219 +V Q + + + + A S S Sbjct: 183 QAGGNDV-FATIQNLVTLLNTPLTPANQAAFTAGVASGLSS 222 >gi|34498333|ref|NP_902548.1| flagellar hook-associated protein 3 [Chromobacterium violaceum ATCC 12472] gi|34104187|gb|AAQ60546.1| flagellar hook-associated protein 3 [Chromobacterium violaceum ATCC 12472] Length = 309 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 41/353 (11%), Positives = 102/353 (28%), Gaps = 49/353 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++++++ L D ++L+ ++ TG+ I + Sbjct: 3 ISSNTLYQSGVNNMSALQSDLLQLNMQIDTGKRVVTPADDPVAAARIELLNSSSGQNTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + V+ LS S + L ++ ++ M + + + + Sbjct: 63 GKNTQAVSSWLSLSDSTLQNVVNLMGAMKSQAIYANNSSLSPTQLQQLQKTVAEGISELT 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 +AN TD G +LFSG + P + + G + + Sbjct: 123 GYANATDGNGNFLFSGNAVTTAPFS-----------------VNMNASPPVTTYNGDNGQ 165 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 S + T I + + A N Sbjct: 166 RSVQVSASRTMTISDPGNVVFGIPG------------------GSPTATFDALAN----- 202 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + L +N +++ + + +A +G E+ + Sbjct: 203 --------LYDLLGQNPKPANFPSQISTIINQISNATQQLSIAQASVGSREQENETLQGM 254 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + ++ I V+ A + + ++ + ++ +LS+ +Y+ Sbjct: 255 SGSLDLQYNSAIGDLQNVDMAKAISNFTLTQTSLQYTQKTYAQVSQLSLFSYI 307 >gi|213585979|ref|ZP_03367805.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 276 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 68/179 (37%), Gaps = 5/179 (2%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++E+ + +KL E+M TG+ + + Q + ++ Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLFQAQAQNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S ++ LS + +Q +V G ++ A L+ + + Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 AN TD G+Y+F+G + P + GY + + D + + Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQQVDSARTMVIGHTGAQIFN 181 >gi|269836593|ref|YP_003318821.1| flagellar hook-associated protein 3 [Sphaerobacter thermophilus DSM 20745] gi|269785856|gb|ACZ37999.1| flagellar hook-associated protein 3 [Sphaerobacter thermophilus DSM 20745] Length = 291 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 51/145 (35%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ + E + ++ +++ +G+ ++L+ + + I + Sbjct: 3 VSTAMMSETILWNITRNAARLDRVADQIGSGRQIRRPSDDPVGTANVLQLDSTRARIQQH 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 L + + + LSS+ +Q + G L+ E + Sbjct: 63 LRNIDDARSWIDATDQALSSINAGIQRAREITLAAANGTLAPENRDAIETELQRILELAI 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNG 150 AN G+Y+FSG + +G Sbjct: 123 GTANTRLNGRYIFSGQKTDTPAFSG 147 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 21/176 (11%), Positives = 52/176 (29%), Gaps = 8/176 (4%) Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 + +N + + K FS I I + ++ Sbjct: 123 GTANTRLNGRYIFSGQKTDTPAFSGPPN--APVYQGDSGPIVRVIDVGVTVTINVTG--- 177 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 D + + ++ + + + + ++ +A G + E+ Sbjct: 178 ---DTAILPTLNALAQAQAAVAANDPDAMRAAIDALDDAHTALLTAQARAGAIGSQLEEQ 234 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L+ + + S+ V+ A + STL + S ++ S+ +YL Sbjct: 235 ASRLEALDVSVARLRSQIQDVDLAKAVSDYSTLQTIYQASLAAGSRGILPSLFDYL 290 >gi|37525848|ref|NP_929192.1| flagellar hook-associated protein FlgL [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785277|emb|CAE14218.1| Flagellar hook-associated protein 3 (HAP3) (Hook-filament junction protein) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 321 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 125/350 (35%), Gaps = 38/350 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ ++++ ++ ++ +GQ + + Q + + Sbjct: 3 VSTNILYDQKMTSITTAQSKWMQQGAQLSSGQRVINPSDDPMAASQGVMVAQAEAQNQQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + S +S + +S +VQD+ LV + G + A L E V Sbjct: 63 ITARSFAKNAISMQLSVVSKAVGVVQDIHESLVATVNGVLSDEDRNSLAIQLTGFKEQLV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N TD G+Y+F+G + KP T +++ + + ++ N ++ + Sbjct: 123 NLGNTTDGNGRYIFAGYKTDMKPF-DESTTGTVSYLGGSEEITQKVDSNRSMIIGHTGKQ 181 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V F+ + + + N S+ +I ID++ Sbjct: 182 V----------FLSSTSNPIKEPDG------NQSESDIFK------TIDMAIQSLKTPFV 219 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + D A L K + L+ I +VLG+ + E+ Sbjct: 220 E-----------ADQKSRDDALE-LLNKANRGARNALNNISSVESVLGL-QLREMEDLDN 266 Query: 305 LQNKNNIID-TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 L + ++ + + +S+ + VE ++A + ++ SY ++ +S+ Sbjct: 267 LGAERSLANKSRLSQLVDVEWNSAISNYYQQQAVLQASYKTFADMKGMSL 316 >gi|283954448|ref|ZP_06371968.1| putative flagellin [Campylobacter jejuni subsp. jejuni 414] gi|283794065|gb|EFC32814.1| putative flagellin [Campylobacter jejuni subsp. jejuni 414] Length = 750 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+S+ M ++ +++ +G + + E E + + Sbjct: 10 TNSVNNSM-----GGQSALYQISQQLSSGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKE 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 S S + S L M K+ ++ + A L ES V Sbjct: 65 STSRAQEMTQNSMKALQDMVKLFENFKVKVTQAASDSNSQTSREAIAKELERIKESIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSINGQYLFAGSQVANKPFDS 147 Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 61/171 (35%), Gaps = 5/171 (2%) Query: 189 NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI-- 246 + + + + + A+ N + ++ ID N+ I+D+ Sbjct: 583 SGTNIEISLSDSQSGRFPQPPFTTTSLVANGPNFSFSANNSLVID---EPNVDIIKDLDS 639 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 M AV+ + + ++ RN + L + I + +G I + Sbjct: 640 MIDAVLKGNMRADSESEDPRNTGMQGALKRLDHLADHISKLNTTMGAYHNTIKDVNTRST 699 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + S I ++ A L + + S +T + +LS+LNY+ Sbjct: 700 FLSVNVQSIKSNVIDMDYGEAMINLMQVQLAYQASLKASTTISQLSLLNYM 750 >gi|241203117|ref|YP_002974213.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857007|gb|ACS54674.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 320 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 37/334 (11%), Positives = 100/334 (29%), Gaps = 38/334 (11%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 TS+ + + +NK++ + +++ +G + + + + ++ Sbjct: 6 TSAAAVNALAVLRSINKEASQTQQQVSSGYRIETAADDASYWSVATVMRSDSTNLGTIGD 65 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 + L ++ + + S ++ ++ LV E D +K ++ ++ V Sbjct: 66 ALGLGAAKVDATYTAMDSAIDLIGEIRAKLVSAREPGADKDKINAEISEYKEQLQTVVES 125 Query: 128 ANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSS 187 + G+ + A Q++ GF+ + A SS Sbjct: 126 --TSFAGE--------------NWLLNGDAAAPPTWQVISGFVRAPTGEYQAQTIDFPSS 169 Query: 188 MNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM 247 D AS + + + R + Sbjct: 170 QT-------------ILIDKNN-------ASGGLLTKSVDANAINNSG--ATSRNYYLLN 207 Query: 248 FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQN 307 + + + ML LS + A +G+ + I+++ + N Sbjct: 208 ANSTTPATGTEIAIGKNTTDAQLTDMLDVTDSLLSSLTTTAASIGVMKTRIDDQIDYTAN 267 Query: 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 ++ ID + + + A + + + +M+ Sbjct: 268 LSDSIDKSVGALVDTDMDEASIRQKAIETQKQMA 301 >gi|95928659|ref|ZP_01311406.1| flagellin-like [Desulfuromonas acetoxidans DSM 684] gi|95135449|gb|EAT17101.1| flagellin-like [Desulfuromonas acetoxidans DSM 684] Length = 294 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 5/149 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+TT T+S++ M + + +L+ M T + + + V +I + Sbjct: 2 MRTT---TTSVYRSMQLNIARAEDELNRLY--MHTEKRVNVASDDPSAVRAIENARSQMT 56 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + V + +L +++ I+Q + + + A + Sbjct: 57 MSDRYIENIETVQDGMDIVDGYLDTVENIMQRIQEITTAAINSSLSDADAVTYADEVATL 116 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLN 149 E V AN G+YLF+G +P + Sbjct: 117 KEQLVDVANTQVNGKYLFAGFTDDTQPFS 145 >gi|325111106|ref|YP_004272174.1| flagellin domain protein [Planctomyces brasiliensis DSM 5305] gi|324971374|gb|ADY62152.1| flagellin domain protein [Planctomyces brasiliensis DSM 5305] Length = 743 Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 57/145 (39%), Gaps = 2/145 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTG-QSSDYGLQLGARVTSILEWEQEKNHIAE 64 I S +F R ++ + ++L +++ TG + + G + + + +Q + Sbjct: 11 IPNSLLFTRSLQNLDRVSSEYLRLQDQISTGLKFQNIG-ENPSAAIQTIVLQQSLERNEQ 69 Query: 65 RLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + L+ ++ L + + M ++ L + ++ A + + Sbjct: 70 LQSNVETNRSLLTATEQALGDIGDVFNQMQTFILAGLGDGSSPSEKAQMANEVDTLIQHV 129 Query: 125 VTFANMTDEGQYLFSGINSSEKPLN 149 V +N T G+YLF G ++ P + Sbjct: 130 VNISNSTFRGRYLFGGSQNTAAPFS 154 >gi|257095352|ref|YP_003168993.1| flagellar hook-associated protein 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047876|gb|ACV37064.1| flagellar hook-associated protein 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 446 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 52/144 (36%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ I+ + + KL ++ + + L Q K A+ Sbjct: 3 ISTNQIYSAGVRSIQRNQEQLAKLQNQISSDRRMLTPADDPVASARALTITQAKGLTAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + RL + L+S+ ++Q +V ++ A L ++ + Sbjct: 63 VENQRDASDRLGLVDSQLTSLTDLLQSARSRVVQASNTILGDSDRQAIAAELAARFDEML 122 Query: 126 TFANM-TDEGQYLFSGINSSEKPL 148 AN +G YLF+G S P Sbjct: 123 GIANSRNAQGDYLFAGYQSETTPF 146 >gi|118475640|ref|YP_891858.1| flagellar hook-associated protein [Campylobacter fetus subsp. fetus 82-40] gi|118414866|gb|ABK83286.1| flagellar hook-associated protein [Campylobacter fetus subsp. fetus 82-40] Length = 947 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 3/137 (2%) Query: 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114 E E N + + +++ T+ S L+ + + L+ + A Sbjct: 52 LEYEINLLDQVKQTSTKATEFSKNSDKALNDFVSKLTEFKTKLIQAGNDIHNETSRNAIA 111 Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLN---GYFTKDSLAKKSFDQMLQGFLE 171 L + + AN + GQ+LFSG KP++ Y + L + Sbjct: 112 NDLEGLKKHLIDIANSSINGQFLFSGTALDTKPIDSAGNYHGNNQLINAAIGANQTTAYN 171 Query: 172 ENSKSLLAGQHLEVSSM 188 + ++L G+ + + Sbjct: 172 IDGQTLFLGKDNDYKKI 188 >gi|114565762|ref|YP_752916.1| flagellin-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336697|gb|ABI67545.1| Flagellin and related hook-associated proteins-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 870 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 101/329 (30%), Gaps = 19/329 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ + +N K ++ T + + A + L + Sbjct: 5 VTNKMLVNELNRNLTNNMLRMDKFQRQLSTTRKINTPSDDPAGLVKSLRLRTNLIEGEQY 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 L + + L T+ A ++ +I+ + V F A +R+ E Sbjct: 65 LTNINESLGFLDTTDAAFGNINEILHEAREMAVKASTDSNVKPDFAAMAKKIREMNEQLK 124 Query: 126 TFANMTDEGQYLFSGINSSEKPL--NGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 AN T +Y+F+G N +E P + + ++ +++ G+ Sbjct: 125 MIANSTYGSKYIFAGSNVTETPYENGNWRGNSEAMETEIGVGVKIPFNIDAREFFVGRLD 184 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 E+ A + +++ K + + N+S S+ R E ++ N G+ Sbjct: 185 ELQVDPASGINA--EKVVGKNLQEGNYKVNYSLVSN---AARGTARESGNMLTADNNTGM 239 Query: 244 RDIMFVA-----VIGTEFLSKNLTDGARN-------VLTKKMLSTVQQGLSGIIEQRAVL 291 A + LT + + T+ +SG I Sbjct: 240 FFFYDNAGTPANASIAIGTAAGLTASVYSGFLNIKVTTVDEATDTLTVDISGRIAIEGET 299 Query: 292 GISEKNINEERVFLQNKNNIIDTYISKSI 320 G + NI + + N IS + Sbjct: 300 GYQDINIAGVSLNMAAANGDAIGSISAAQ 328 Score = 37.0 bits (84), Expect = 4.5, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 32/77 (41%) Query: 281 LSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEM 340 + ++ R+ +G + ++ L++ + +SK+ + QL N Sbjct: 793 MEELLLYRSTVGARVNRLELQQSRLESIQETFTSLLSKTEDADMAEVIMQLQLQENVYRA 852 Query: 341 SYMITTKLQKLSILNYL 357 S ++ + S+L++L Sbjct: 853 SLAAGARIIQPSLLDFL 869 >gi|331011050|gb|EGH91106.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 215 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +E N + + +K EE+ +G + +L+ Q+ + + + Sbjct: 3 ISTTQFYESTNTNYQRTYSNVLKTSEEVSSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + S+ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQTAREVIVSAGNGAYTDSDRLAKAAELKQYQSQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+F+G SS P Sbjct: 123 GLMNSQDSNGQYIFAGSKSSAPP 145 >gi|296122955|ref|YP_003630733.1| flagellar hook-associated protein 3 [Planctomyces limnophilus DSM 3776] gi|296015295|gb|ADG68534.1| flagellar hook-associated protein 3 [Planctomyces limnophilus DSM 3776] Length = 638 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 37/82 (45%) Query: 276 TVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLI 335 +++ I R +G ++ I+E L ++N + +S + A QL L Sbjct: 557 LLEKASGQITISRTEIGTRQQLIDEVGNRLDDQNLLTKETLSNIFDTDLTEAATQLLQLR 616 Query: 336 NKIEMSYMITTKLQKLSILNYL 357 E S +T + +LSILNYL Sbjct: 617 QVYEASMQLTAQTLQLSILNYL 638 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 48/142 (33%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 S ++ N + +L +++ T Q + + + + Sbjct: 13 NSLLYSNANRDLQTGTSLISRLQQQINTQQKYNLLSENPTATRQTSSLQSLLERVQGVRS 72 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 ++ LS + L ++ +V G L + + + A + +S + Sbjct: 73 QHTYNQGFLSAADNALGAVNDVVVQAKGILQTGIGSTSTPEEKIGLANEVATLIQSALNS 132 Query: 128 ANMTDEGQYLFSGINSSEKPLN 149 AN + ++LFSG + P + Sbjct: 133 ANTQYQDRFLFSGTATGVSPFD 154 >gi|163750563|ref|ZP_02157801.1| flagellar hook-associated protein FlgL [Shewanella benthica KT99] gi|161329718|gb|EDQ00707.1| flagellar hook-associated protein FlgL [Shewanella benthica KT99] Length = 404 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 72/203 (35%), Gaps = 2/203 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +F + + + + E++ +G+ + I Q+ + + Sbjct: 3 ISTAQMFNQNINSVLDRQSATNSIMEQLSSGKRVNTAGDDPVAAIGIDNLYQQNALVDQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T L+ +++ L S + +V ++ + G +N+ A LR S E + Sbjct: 63 VKNIDYATSHLALTESKLGSAEALVSSTKDQVLRAINGTVTDNERQTIADELRSSLEELL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN D G YLFSG + +P + T ++ + Q + Sbjct: 123 AIANSKDESGNYLFSGYETGTQPFA-FNTSGNIVYSGDSGVRQSIVASGVTVGTNSPGDS 181 Query: 185 VSSMNAQQMTDFIKQLEDKFSDD 207 M DF S D Sbjct: 182 AFMNAPNAMGDFSVNYLPGQSGD 204 >gi|212637792|ref|YP_002314317.1| flagellin [Shewanella piezotolerans WP3] gi|212559276|gb|ACJ31730.1| Flagellin [Shewanella piezotolerans WP3] Length = 305 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 114/358 (31%), Gaps = 61/358 (17%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +S +++ + D KL++ M TG+S ++ +++ + Sbjct: 3 VSMLNLYSNNLQSLQNSTADISKLNQMMATGKSILRPSDDPIGSVKVIGGQRDLAATNQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + ++ S ++ ++SSM ++ M V G A + + E+F Sbjct: 63 IKNTESLSTSFSRAETYMSSMVELQTRMREITVAANNGSLSPEDRAAYAAEMEELLEAFT 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN-----GYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 N D G YLFSG + P++ Y + + ++ N + Sbjct: 123 DTVNAKDEGGNYLFSGNLTDTAPISKDASGNYLYQGDNNHREVQTSGSSWMTANVTASEF 182 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 S + Q DFI L D +S A+ + Sbjct: 183 LFSNGSSDI-LNQTQDFINVLNDPSLAPGDPT--FSQAATDMLTS--------------- 224 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 + L+ I +G + I+ Sbjct: 225 -------------------------------------LDDTLTSISSAITDIGGKQNTIS 247 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + + I ++ G++ A A+ + + ++++ ++ +LS+ N++ Sbjct: 248 LIQTSHEERVLFNEEVIGETEGLDYAQATAEFNLKLTALKVTQQTFVQVTQLSLFNHM 305 >gi|289208121|ref|YP_003460187.1| flagellar hook-associated protein 3 [Thioalkalivibrio sp. K90mix] gi|288943752|gb|ADC71451.1| flagellar hook-associated protein 3 [Thioalkalivibrio sp. K90mix] Length = 416 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ IF+ + + + ++ +G+ + T I ++E+ + Sbjct: 3 ISTTQIFQSGINQIQAGQGELNRTSLQLGSGKRILSPSDDPSGATQINQFERIIKATKQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + R+ ++ L+ +Q +V A LR + + Sbjct: 63 QRNMENTQPRMQQQESLLAQGTDALQRARELVVTGNNDSQTRETRGYLADELRQIRDGML 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL 148 AN D G+Y+F+G S +P Sbjct: 123 DIANTKDPNGEYIFAGTKSQNQPF 146 >gi|238028841|ref|YP_002913072.1| flagellar hook-associated protein FlgL [Burkholderia glumae BGR1] gi|237878035|gb|ACR30368.1| Flagellar hook-associated protein 3 [Burkholderia glumae BGR1] Length = 409 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 56/406 (13%), Positives = 125/406 (30%), Gaps = 54/406 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ISTS + + L +L++++ +G + ++ +A+ Sbjct: 3 ISTSQFYTQNIELMNNQQSQLSELYQQVASGNTLLTAADDPLGAAQAVQLSASSATLAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S L LSS+ ++ ++ L + G ++ A L+ ++ + Sbjct: 63 SSNQSSALSSLQLEDKTLSSVTNVLNAVIPSLSGAINGTLSDSDRSALAAQLQGQRDTLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFT----------------KDSLAKKSFDQMLQG 168 AN TD G YLF+G+ S +P + DS++ D + Sbjct: 123 QLANTTDGTGNYLFAGLQSGNQPFTNSPSGGVMFSGDTGQRTVQLSDSVSVAIGDSGARV 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNW--------SNASDH 220 F + L+ S+ + +++ + + +D+ Sbjct: 183 FTSVPALGSLSVPASNPSNTGTGTIGVITGGTPGDPTNNHAFTVTFGGTTGAPTYTVTDN 242 Query: 221 NIKYRIKDTEGIDVSANVNMRGIRDI-----------------------------MFVAV 251 T + + G + + +A Sbjct: 243 ATTPPTVGTAQTYTAGSAISIGSQSMIISGNPAPGDSFTLTPATQAGGDMIGALDAAIAA 302 Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + S N L+ +Q ++ + +A +G E+ + + + Sbjct: 303 LKQPVGSGAAAGATLNNALSTALTKMQNAVANVTTVQASVGGREQEVKSMQTITSTNSLQ 362 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I ++ A QL + N + + +K+Q LS+ YL Sbjct: 363 ITNSLTDLTQANMPAAITQLLQVQNSLTAAQQAFSKVQGLSLFQYL 408 >gi|330863343|emb|CBX73466.1| hypothetical protein YEW_ES20610 [Yersinia enterocolitica W22703] Length = 259 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 103/309 (33%), Gaps = 53/309 (17%) Query: 51 SILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKF 110 +++ E K+ + + + ++ S +A L S++ + + L+ G + Sbjct: 2 QLVQLENSKSDVNQYKTNVVRLSGNYSVQEASLKSLEGQLLVVRDKLLAAKNGNHSATES 61 Query: 111 PINAGMLRDSYESFVTFANM-TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGF 169 + + ++ N EG YLF+G ++ +P+ K + +G Sbjct: 62 ATFGREINLLLDGMMSDLNTKNSEGNYLFAGTKTNIEPVE-------YNKTTQTYTFKG- 113 Query: 170 LEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDT 229 + + + + Q+ TD Sbjct: 114 ------NNERRDAVVGNGITLQENTD---------------------------------- 133 Query: 230 EGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRA 289 + S + + + + + + + + ++ A N L+ ++ G I Sbjct: 134 --LSSSLSASGNNLEILTNLKKLANKMIDSSIKPAAYNQEISDNLAAIEIGAKKIGGMLT 191 Query: 290 VLGISEKNINEERVFLQNKNNIIDTYIS-KSIGVEQHTAHAQLSTLINKIEMSYMITTKL 348 LG + + L + I++ + ++ ++ + + ++++ + K+ Sbjct: 192 DLGAKQNRLEH-LSNLHDDVEIVNANLEKDLAEIDILQVNSAMQSNFLSTKIAHSMQAKI 250 Query: 349 QKLSILNYL 357 +LS+ NY+ Sbjct: 251 SQLSLFNYI 259 >gi|104782835|ref|YP_609333.1| flagellar hook-associated protein FlgL [Pseudomonas entomophila L48] gi|95111822|emb|CAK16546.1| flagellar hook-associated protein FlgL [Pseudomonas entomophila L48] Length = 522 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ISTS + + + ++VK E+ G +L+ EQ++N + + Sbjct: 3 ISTSQFYNTSSANYQRGLANTVKSQEQSSDGIRVRTAADDPVGAARLLQLEQQQNMLDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + V L TS+A L+S+ ++Q + V + NA L E Sbjct: 63 KGNITNVRNALGTSEATLNSIGAVLQRVNELAVTSGNAGFTDADRKANASELAALEEQLF 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 + N D G+YLFSG +P Sbjct: 123 SLMNSKDENGKYLFSGSKGDTQP 145 Score = 37.4 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 32/88 (36%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + V + + + +G + ++ + + + S V+ T Sbjct: 435 LDSAIGNVASATNQVASSISSIGGRGQALDIQAETNEALSTENTKTQSSIREVDPATVML 494 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 +L N ++ S K+ LS++NY+ Sbjct: 495 RLQMQTNMLQASMQSFAKISGLSLVNYI 522 >gi|192360249|ref|YP_001982393.1| flagellar hook-associated protein type 3 FlgL [Cellvibrio japonicus Ueda107] gi|190686414|gb|ACE84092.1| flagellar hook-associated protein type 3 FlgL [Cellvibrio japonicus Ueda107] Length = 529 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 2/147 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS I+ + + K+ E+M TG+ T+IL+ QE + Sbjct: 3 VSTSQIYNIATLGISQAQSSVTKIQEQMATGKKVLSPADDPVAATTILQLNQELARTEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVG-PLVILLEGKTDNNKFPINAGMLRDSYESF 124 + + L+ ++ L ++ +VQ M + + A + + Sbjct: 63 KKNIDIAENNLNLEESSLQTIVSLVQRMRQIAVSAGNTAVLTQADYAAYAAEVEARMDEL 122 Query: 125 VTFANM-TDEGQYLFSGINSSEKPLNG 150 + N GQY+F+G SS KP Sbjct: 123 LNLQNTRNASGQYIFAGYQSSTKPFTS 149 Score = 36.2 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 38/111 (34%) Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 + A E + L K L+ ++ ++ + + +G + R Sbjct: 418 LSRFAQAMREVKDSPESKEKLAELVAKTLTNLESAITNLAAVQGDVGARLNTLESSRDLN 477 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 + T +S ++ A QLS + + K+ +LS+ +Y Sbjct: 478 LDVTLTTKTVLSSLQDLDYAEASIQLSMQSFVLSAAQQSFVKVSQLSLFSY 528 >gi|258621056|ref|ZP_05716090.1| Flagellar hook-associated protein 3 [Vibrio mimicus VM573] gi|262166275|ref|ZP_06034012.1| flagellar hook-associated protein FlgL [Vibrio mimicus VM223] gi|262170832|ref|ZP_06038510.1| flagellar hook-associated protein FlgL [Vibrio mimicus MB-451] gi|258586444|gb|EEW11159.1| Flagellar hook-associated protein 3 [Vibrio mimicus VM573] gi|261891908|gb|EEY37894.1| flagellar hook-associated protein FlgL [Vibrio mimicus MB-451] gi|262025991|gb|EEY44659.1| flagellar hook-associated protein FlgL [Vibrio mimicus VM223] Length = 397 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 51/404 (12%), Positives = 128/404 (31%), Gaps = 63/404 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G+ SD L I Q++ Sbjct: 5 ISSFHNYQAVQNDIRRQESKVFNNQAQLASGKKLLSASDNPLA----THYIQNVGQQEEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + L + LV RL + +S+ ++ ++ ++ G A +L++ Sbjct: 61 LRQYLDAIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMA 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL------------NGYFTK-----------DSL 157 +F+ AN+ D G Y+F+G +P + Y K ++ Sbjct: 121 SNFLNLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYAGDDYQRKMKISNSLEIPFNNP 180 Query: 158 AKKSFDQMLQGFLEENS--------------KSLLAGQHLEVSSMNAQQMTDFIKQLEDK 203 K F ++ + L + M D + + Sbjct: 181 GSKVFMEIPNPYGSYEPNYTLQEGSELLLERAVNLNPDDTSSYRITFVDMPDGKNGYQLE 240 Query: 204 FSDDEYWANNWSNAS-------DHNIKYRIKDTEGIDVS---ANVNMRGIRDIMFVAVIG 253 + A + + + +K +I + ID++ RD + A Sbjct: 241 RNGSVVQAGEFDPKTGIQFEELNIQVKGQITKGDAIDLTPRDTFSVFDTFRDAIRYA--- 297 Query: 254 TEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 +++D + +++ + + R +G ++ + ++ + Sbjct: 298 ----EGSVSDASNTAKLHQLVEEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKISLA 353 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S ++ A + + ++ S K + L++ NY+ Sbjct: 354 KSKSTFEDLDYAEAVIEFNENSRALDASQKAFGKTKDLTLFNYI 397 >gi|332284026|ref|YP_004415937.1| flagellar hook-associated protein 3 [Pusillimonas sp. T7-7] gi|330427979|gb|AEC19313.1| flagellar hook-associated protein 3 [Pusillimonas sp. T7-7] Length = 412 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 57/415 (13%), Positives = 130/415 (31%), Gaps = 67/415 (16%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWE 56 M+ + ST +N + + D + L++++ +GQ +D L + Sbjct: 1 MRIS--STLFFQTGLNSIHAQ-QSDLMHLYQQIGSGQRMVTPADDPLA----AAQAINIS 53 Query: 57 QEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGM 116 Q ++ + S++++ L + L+S+ ++QD+ L+ G + + + Sbjct: 54 QSQSLNQRFAENRSVLSQNLGIEENTLNSVTTLLQDVKTRLIEAGNGTMSDADRATLSNV 113 Query: 117 LRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFT--------------KDSLAKKS 161 L ++ S + AN TD GQYLFSG + KP D + + Sbjct: 114 LANARTSLLGLANATDGSGQYLFSGAQGNVKPFQEGANGIEYLGDQYQRNIQADQTRRIA 173 Query: 162 FDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLED-----------KFSDDEYW 210 + + + + + F+ + Sbjct: 174 GGDVGTDVFNRAAPGSTGYLSRAEGANTGTAVVGSPAITDPRGEGVGYIYTIAFTSGADY 233 Query: 211 ANNWSNASDHNI------------KYRIKDTEGIDVSANVNMRGIRDIMFVAV------- 251 + ++A ++ + + G+ V+ + + + V Sbjct: 234 TVSITDAQNNLVSEYDGTGYVAGSTDHLDLQGGVQVAISGSPASGDKFVLEPVSATTDLN 293 Query: 252 -------IGTEFLSKNLTDGA----RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 I +D + + + ++ RA +G I+ Sbjct: 294 IFNTLDSIIASLGDPTQSDAVNVAKFQNTLGSAIQRIDVNYNNVLTVRASVGARMNEIDA 353 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + +SK V+ ++A AQL +E + + K+Q + N Sbjct: 354 LDANGMQRALSYSNQLSKMEDVDYYSATAQLQLRTAALEAASLAFRKIQATGLFN 408 >gi|254502144|ref|ZP_05114295.1| hypothetical protein SADFL11_2182 [Labrenzia alexandrii DFL-11] gi|222438215|gb|EEE44894.1| hypothetical protein SADFL11_2182 [Labrenzia alexandrii DFL-11] Length = 493 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 69/211 (32%), Gaps = 10/211 (4%) Query: 153 TKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWAN 212 T + K + D + + A +T ++ Sbjct: 286 TAQTTLKAASDIWASDEFFSTYNGEVPQRIDGPPYTTATALTSGATDTLSWYTGRNTTTT 345 Query: 213 NWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF---LSKNLTDGARNVL 269 + +D N I ++ N +++++ L + N L Sbjct: 346 D--PRTDKNAI--IDTNLTVEYGVRANEEPLQELVQTLATFAAADFSGGAQLDEEYYNAL 401 Query: 270 TKKMLSTV---QQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHT 326 + + + + SGI++ + I+ + + N + I + G++Q Sbjct: 402 STDLRAILQPPGIDQSGIVDISTDIAIAHRTASLTDQRHIQVVNTYEATIGEIEGIDQDR 461 Query: 327 AHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 A++ L IE+SY ++ + LS+ +YL Sbjct: 462 LAAEILQLRTNIEVSYNASSIVFNLSLADYL 492 Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 50/173 (28%), Gaps = 3/173 (1%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 LN + ++ +G+ +G R ++ Q+ + I + ++ L Sbjct: 1 MLNLNDKLTEKTTQLASGKVGSTYGDIGDRRLLDIQLTQKVSLIESYQETITISNLHLEA 60 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 L ++ I +D + + + + N G Y F Sbjct: 61 MTVSLDRLEDIRRDAKSAMDTNDFVIQSDGQ-TQTQSRAELLLNEALNILNTEVAGYYPF 119 Query: 139 SGINSSEKPLN--GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN 189 G ++ P+ + + F + N +L G+ + Sbjct: 120 GGTDAISDPVQAIDTIMNGANGLSGLKDYMSEFSQANLGALNNGRMTVSALTT 172 >gi|78777235|ref|YP_393550.1| putative flagellin [Sulfurimonas denitrificans DSM 1251] gi|78497775|gb|ABB44315.1| putative flagellin [Sulfurimonas denitrificans DSM 1251] Length = 701 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 75/224 (33%), Gaps = 6/224 (2%) Query: 20 KELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTS 79 L++ +++++ +G Y + T + + E + + S K + + Sbjct: 18 SRLSQSLFDVNKQIASGLKIQYAQEDIRAFTETMRLDNEITTLDQSKKSTVSAMKFSNQT 77 Query: 80 QAHLSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 + L+ + LV G A LR F + AN + GQYLF Sbjct: 78 DSVLNEFALSMDRARVLLVKASNSGVNSEASLDAIAYELRGLETHFKSLANTSINGQYLF 137 Query: 139 SGINSSEKPLNG---YFTKDSLAKK-SFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 SG KP+ Y D++ K + Q + + + + + Sbjct: 138 SGSAIDTKPIADDGTYNGNDAILKAFTGSGTSQQYNISGQELFFGEKQSTRREITTNVIQ 197 Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEG-IDVSAN 237 + F+D + S I+ + DT+ IDV N Sbjct: 198 LNLSSKYPDFTDAAVEGDTKYLKSSDTIRDLMGDTDNFIDVGTN 241 Score = 43.5 bits (101), Expect = 0.054, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 39/96 (40%) Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 + AR++ + ++ + + + + +G +++ ++ T S I Sbjct: 606 SGDARSIGIENAIAMIDELHEHVTRSHSQVGAQTNALSKSLERVEMLKMSSMTLRSSVID 665 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + AH L+ L + K+ KLS++NYL Sbjct: 666 TDMAEAHLTLAQLNTNYQAMLSTVGKISKLSLVNYL 701 >gi|302387757|ref|YP_003823579.1| Flagellin and related hook-associated protein-like protein [Clostridium saccharolyticum WM1] gi|302198385|gb|ADL05956.1| Flagellin and related hook-associated protein-like protein [Clostridium saccharolyticum WM1] Length = 337 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 114/356 (32%), Gaps = 26/356 (7%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+T++I + ++T +S + + + ++ I + Sbjct: 3 ITTNAILRDYKSNLAATIDNLNLSRTRVMTQRSFNSVAEDPGSAARASQLHRKYYKIQDN 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGP--LVILLEGKTDNNKFPINAGMLRDSYES 123 L + + R + L+ + +V+ + + + K A +R +S Sbjct: 63 LSMLTDIQSRQDGQEGALTQVSNMVKTISEDYNVQAMSGDKQTPETRQTFAAAIRQYQKS 122 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 V N T E +LF+G + P + S D + N + + Sbjct: 123 MVLSLNSTYEDTFLFAGSDGKNAPF----------ELSADGKTLTYRGINVDAPMNTS-- 170 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + +S+ L S DE S+A + I + + G+ Sbjct: 171 DYASLTNLSNEKLYVDLGMGLSLDEADQVVPSSAFN------ISLPGIKAIGYGQDKNGM 224 Query: 244 RD--IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 + ++ + +KN A L K L+GI LG+ + + Sbjct: 225 SNNVVVLAGQLVEALEAKNFDADAYGKLMNKFKDLSTNILNGIT----DLGVKSEFLTTT 280 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + L++ + I + K G++ A + + T + S ++++ Sbjct: 281 KDRLEDADISIQEQMQKVEGIDPAAAITDYMWNQYAYNAALKVGTSILSPSFIDFM 336 >gi|323490136|ref|ZP_08095356.1| flagellar hook-associated protein FlgL [Planococcus donghaensis MPA1U2] gi|323396184|gb|EGA89010.1| flagellar hook-associated protein FlgL [Planococcus donghaensis MPA1U2] Length = 293 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 38/84 (45%) Query: 274 LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLST 333 +S V + ++ A G + + L + N + + +S+ V+ A +L + Sbjct: 209 VSKVDAAIDRLLSVGAENGARQNRVEAVENRLLDSNLELQSMLSRVEDVDYAEAVIRLKS 268 Query: 334 LINKIEMSYMITTKLQKLSILNYL 357 + + S T+K+ + S++++L Sbjct: 269 EESVYQASLAATSKIIQPSLMDFL 292 >gi|257484938|ref|ZP_05638979.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 255 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +E N + + +K EE+ +G + +L+ Q+ + + + Sbjct: 3 ISTTQFYESTNTNYQRTYSNVLKTSEEVSSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + S+ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQTAREVIVSAGNGAYTDSDRLAKAAELKQYQSQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+F+G SS P Sbjct: 123 GLMNSQDSNGQYIFAGSKSSAPP 145 >gi|167835121|ref|ZP_02462004.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis MSMB43] Length = 410 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 50/406 (12%), Positives = 120/406 (29%), Gaps = 54/406 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS+S ++ + + +L++++ +G S ++ +++ Sbjct: 3 ISSSQLYSLNVDMMNDQQAQIAQLYQQVSSGVSLTTPADNPIAAAQAVQLSATSATLSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++V L T L+S+ ++ ++ +G ++ A ++ S + + Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQAIMHAGDGGLSDSDRAALAAQIQGSRDHLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLN-----------GYFT-----KDSLAKKSFDQMLQG 168 T AN D G YLF+G + +P + Y D+ D Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNKPGGGVTYAGDYGARTVQIADTRTVPQGDNGASV 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDF-IKQLEDKFSDDEYWANNWSNA-------SDH 220 F+ L S+ + I D + ++ A +D+ Sbjct: 183 FMSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTITFGGTAAAPTYTVTDN 242 Query: 221 NIKYRIKD--------------TEGIDVS-----------ANVNMRGIRDIMFVAVIGTE 255 + + + VS G + + Sbjct: 243 TVTSPTPPVAQPYSPGEGIDLGGQTVAVSGTPAAGDTFTVTPAPQAGTDVFATLDTVIAA 302 Query: 256 F----LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + A + + ++ ++ +A +G + + + + Sbjct: 303 LKTPVGNSPTASTALTNTMATASTKLMNTMTNVLTVQASVGGRLQEVKAMQAVTTTNSLQ 362 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S A +Q L N + + ++Q LS+ YL Sbjct: 363 TTNSLSNLTDTNLPAAISQFLQLQNSLSAAQKAFVQMQNLSLFQYL 408 >gi|168333625|ref|ZP_02691885.1| flagellar hook-associated protein FlgL [Epulopiscium sp. 'N.t. morphotype B'] Length = 381 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 37/339 (10%), Positives = 104/339 (30%), Gaps = 35/339 (10%) Query: 49 VTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN 108 L+ + + + + S +S+M++I++++ L G Sbjct: 48 AGRSLKLRIDVTEAEQYEQNTKEAMSWMEISDGAISNMEEILKEVKTRLNQASTGALTQE 107 Query: 109 KFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLA---------- 158 + E N + G+++FSG + T + Sbjct: 108 DKEKILSDILQLSEQIKDELNTSYAGRFVFSGHKIDQPVYYDVDTTLAKNITSSIDIQLS 167 Query: 159 ---KKSFDQMLQGFLEENSKSLLAGQHLEVSS--------MNAQQM---TDFI--KQLED 202 K + + K+ G + N ++ FI + Sbjct: 168 EDMKVGINGLTLTSPMVVPKATTLGGTPYAAGEEVPANTIFNPGEVVPKGSFIPKGTVFT 227 Query: 203 KFSDDEYWANN---WSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFV-AVIGTEFLS 258 ++ N N +D +I+Y I +++ N + DI + + Sbjct: 228 AETEIPASTANPDVVGNTADQDIRYEIGVGIELEI----NETHLSDIFVGNYEKVVDNIV 283 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 + + L ++ + + S + E+ A G + + + + +S+ Sbjct: 284 EAVEMDDIERL-SALIEDIDKTRSALSERMADGGSRQVRLELTQRKMAEDQVTFTELLSE 342 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + V+ + + + + + ++++ ++ +Y+ Sbjct: 343 TEDVDIEEIFVEFNAQMMVYQSALKASSQVVMNTLADYI 381 >gi|217076646|ref|YP_002334362.1| flagellar hook-associated protein 3 [Thermosipho africanus TCF52B] gi|217036499|gb|ACJ75021.1| flagellar hook-associated protein 3 [Thermosipho africanus TCF52B] Length = 295 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 97/305 (31%), Gaps = 22/305 (7%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ I ER + KLH+++ +G+ Y T + + Sbjct: 3 ITNGMINERTLFNIQHSLYRISKLHDKLSSGKEVSYPSDDAVVATRASNISSRMRELKQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++ + + + + + +V G D + A L E Sbjct: 63 KRNVEHTQNFVNIYDSTIQELTNVYHRIKELIVRGANGTNDAAEREAIASELEKLKEHLE 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNG---YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 AN G+Y+F G S KP+ D+ K+ + M GF E ++ Sbjct: 123 DIANTQLGGEYIFGGARSDLKPVENGKIQTPPDANIKRKVNAM--GFTIEYGVTVYDVFK 180 Query: 183 LEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG 242 LE N + I + + + SN + + T + N R Sbjct: 181 LE----NGKDAFTVIDDAINALREGN--SLKLSNITLKEVNLLESSTMEVFAQIGANSRT 234 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 + + F+++ L+ LT + L+ + Q++VL + + Sbjct: 235 LELVSSRLTDIDTFMTEYLSKEQDADLT--------KVLTDLSMQQSVL---QAALKSAA 283 Query: 303 VFLQN 307 LQ Sbjct: 284 QVLQK 288 >gi|90418382|ref|ZP_01226294.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1] gi|90338054|gb|EAS51705.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1] Length = 325 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 107/353 (30%), Gaps = 41/353 (11%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I+T+ +N + + + TG A + + + Sbjct: 2 TSINTNVSAMTALQSLSMINNNLDETQNRISTGYRVGAASDNAAYWSIATTMRSDNKALG 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ + + +V ++ LV E D NK L++ S Sbjct: 62 AVEDALGLGQAKVDTAYTGMKAAIDVVDEIKTKLVAAREPGVDRNKIQSEIAELKNQLTS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A + G+ + +N + S + S + G + ++ ++ + Sbjct: 122 ISESA--SFSGE---NWLNFDGAAVT-KNVVASFNRSSAGAVSVGTIAIDASAVKLIGNN 175 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEG-IDVSANVNMRG 242 D I + DD +I ID+S V + Sbjct: 176 GAGVPTPAD-DDGILNKDALIGDDA---------------TKIAGNVMDIDISTAVLNQA 219 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 T + M+S V L + + LG ++ +N + Sbjct: 220 ------------AVDGAYTTAETVETVIDAMISNVDTALKSMTTAASNLGAAQSRMNIQS 267 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ N + I+ + + + +L L + ++ +Q LSI N Sbjct: 268 EFVSNLRDSIEKGVGTLVDADMTEESTRLKALQTQQQLG------VQALSIAN 314 >gi|322435944|ref|YP_004218156.1| flagellar hook-associated protein 3 [Acidobacterium sp. MP5ACTX9] gi|321163671|gb|ADW69376.1| flagellar hook-associated protein 3 [Acidobacterium sp. MP5ACTX9] Length = 300 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 76/309 (24%), Gaps = 55/309 (17%) Query: 49 VTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN 108 V + + +++ L + + L + V + V G + Sbjct: 45 VAQNVLLASSISKADSFTQTSTREQAVLQATDSALGEVVSNVTSAITLSVQANAGTLSAS 104 Query: 109 KFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQG 168 L + V+ AN G YLF G P Sbjct: 105 NLKSIGEQLSGIRDQVVSLANTGYLGTYLFGGSQGGTPPFT-----------------LA 147 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKD 228 + + G + S + Q + + A + + Sbjct: 148 TSTDPATVTYNGDSVTQSVVTPDQQKIQVNLPGSAIFQASG--ADLLGALNQVV------ 199 Query: 229 TEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQR 288 ++++GA + + L + QR Sbjct: 200 ------------------------------SDVSNGASGTALASDTAALTTALGNVTSQR 229 Query: 289 AVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKL 348 AVLG S + + + + S + + L+T + + L Sbjct: 230 AVLGSSLSRLTSTTTYSNTQEAQLTAQQSTLLSSDTAAVATGLTTAETQHTALLNVIAGL 289 Query: 349 QKLSILNYL 357 K ++ +YL Sbjct: 290 DKTNLFDYL 298 >gi|227112528|ref|ZP_03826184.1| flagellar hook-associated protein FlgL [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 317 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 51/349 (14%), Positives = 115/349 (32%), Gaps = 39/349 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS ++++ K E++ +G+ S + Q ++ + Sbjct: 3 LSTSMMYQQNMQGIINGQATWQKTGEQLSSGKRVVNPSDDPIAAASAIMLGQAQSENGQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + +S ++ LS + + VI G +++ A LR + Sbjct: 63 TLARTFAKQSMSLEESILSKSTNTISSALTE-VIKGGGVLNDDDRKSVATALRGMKAELL 121 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G Y+FSG ++ + P A ++ Q + + Sbjct: 122 NMANSTDGNGNYIFSGYDTDKVPFVD-----GGAGIAYQGGYQAISQ---------RVDA 167 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 M + + + + D + S SD E +D++ + Sbjct: 168 ARDMTVSHVGS---TVFNGVTGDAKKEPDGSVQSD--------LFETLDIAIKALETPL- 215 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + T + + + + I RA LGI I+ Sbjct: 216 -----------DGANDATKASVAAALETANRGLNNSFNNISAVRAELGIQLNEIDNLDAV 264 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++++ T +S+ + + A + + ++ SY +Q +S+ Sbjct: 265 GKDRDVANKTALSQLQDTDWYEAISSYIMQQSSLQASYTAFQNMQGMSL 313 >gi|209547939|ref|YP_002279856.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533695|gb|ACI53630.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 320 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 41/334 (12%), Positives = 103/334 (30%), Gaps = 38/334 (11%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 TS+ + + +NK++ + +++ +G + + + + ++ Sbjct: 6 TSAAAVNALAVLRSINKEASQTQQQVSSGYRIETAADDASYWSVATVMRSDSTNLGTIGD 65 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 + L ++ + ++S ++ + LV E TD +K + ++ V Sbjct: 66 ALGLGAAKVDATYTAMNSAIDLMGQIRAKLVAAREPGTDKDKINAEIDEYKQQLQTIVES 125 Query: 128 ANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSS 187 + G+ N++ P SF + G + + + Q + V Sbjct: 126 --TSFAGENWLLNGNTTAPP-------TWSVISSFVRAPTGEYQARTIDFPSSQTILVDK 176 Query: 188 MNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM 247 NA ++ A D N T N N Sbjct: 177 NNAS-------------------GGLFTKAVDANAINNSGATARNYYLLNANS------- 210 Query: 248 FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQN 307 + + ML LS + A +G+ + I+++ + + Sbjct: 211 ---TTPATGTEIAIDKNTTDAQLTDMLDVTDSLLSSLTTTAASIGVMKTRIDDQIDYTAD 267 Query: 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 ++ ID + + + A + + + +M+ Sbjct: 268 LSDSIDKSVGALVDTDMDEASIRQKAIETQKQMA 301 >gi|239817150|ref|YP_002946060.1| flagellar hook-associated protein FlgL [Variovorax paradoxus S110] gi|239803727|gb|ACS20794.1| flagellar hook-associated protein 3 [Variovorax paradoxus S110] Length = 403 Score = 50.5 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 102/358 (28%), Gaps = 49/358 (13%) Query: 49 VTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN 108 L Q A+ S S LS + L S I+Q+M V G + Sbjct: 46 AARALGVSQSMAESAQYATSRSRAMLSLSQEETALKSATSIMQNMKTLAVQAGNGTLSDA 105 Query: 109 KFPINAGMLRDSYESFVTFANMTD-EGQYLFSGINSSEKPLNG----------------- 150 A L+ + + V AN D GQ+LF+G S +P Sbjct: 106 DRASLATTLQGNLDQLVNVANADDGNGQFLFAGFKSGSQPFVAGAAGGIQYMGDQGQRLM 165 Query: 151 --------YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLED 202 T D + Q G++ + + ++ K Sbjct: 166 QVDVSRQMSTTDDGRSVFQSVQGGAGYVSSAGAANTGSGVFGAVGVTDAGAANYGKDFVI 225 Query: 203 KFSDDEYWANNWSN----ASDH---------------NIKYRIKDTEGIDVSA--NVNMR 241 FS Y A+ + D + V+ N Sbjct: 226 SFSGGNYTVATQETPPVVAASGAYVPGAAISFGGLQITMSGAPADGDTFQVATARNAGTD 285 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKML--STVQQGLSGIIEQRAVLGISEKNIN 299 I + + L+ N ++L + ++ + +G I+ Sbjct: 286 VFAAIGELVTALRQPLAGNGDSAKADLLNALSTFNVKITHAHDNVLTVMSSIGSRMNEID 345 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ Y+S+ + ++ +A ++ ++ + +L +++ NYL Sbjct: 346 ALDTSGASRGLTDKAYLSELVDLDPASAISEFLQRQTSLQATQQTFARLHSIALFNYL 403 >gi|322832571|ref|YP_004212598.1| flagellar hook-associated protein 3 [Rahnella sp. Y9602] gi|321167772|gb|ADW73471.1| flagellar hook-associated protein 3 [Rahnella sp. Y9602] Length = 320 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 111/349 (31%), Gaps = 37/349 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ I+ + + ++ TG + + Q ++ ++ Sbjct: 3 LSTNMIYNQNMNAVLDGQNRFQATGLQLSTGSKVSKPSDDPLAASQAVLVRQAQSENSQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + +S ++ LSS+ +QD +V +G ++ A L V Sbjct: 63 SVARTFANQSMSQEESILSSVTSTIQDAQTLIVQAGDGSLSDDDRSSLATKLDSLKSQLV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+++F+G S P T ++ + ++ + + Sbjct: 123 NLANSTDGNGRFIFAGYKSDTPPYTQDATTGAVTYSGGTTSITQQVDTSRTMTINHTG-- 180 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 Q+ + + D + S + + Sbjct: 181 -------------NQIFNALTGDAKAEPDGSPSES---------------------DLFK 206 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 I + N TD K + L+ ++ R+ LG ++ Sbjct: 207 TIDGALTALRTPSADNTTDTQYTDAIDKANRGLSNSLNNVLSVRSELGTQMSELDNLDTL 266 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 N++ T +S + E +A + + ++ SY + +Q +S+ Sbjct: 267 GDNRDVSNSTKLSNLVDTEWTSAISTYTLQQVALQASYKTYSAMQGMSL 315 >gi|150395495|ref|YP_001325962.1| flagellin domain-containing protein [Sinorhizobium medicae WSM419] gi|150027010|gb|ABR59127.1| flagellin domain protein [Sinorhizobium medicae WSM419] Length = 321 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 109/352 (30%), Gaps = 44/352 (12%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T+ + +N + + +G + A + + ++ Sbjct: 2 TSIMTNPAAMAALQTLRAINHNLETTQGRISSGYRVETAADNAAYWSIATTMRSDNAALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T + + ++ ++ ++ LV E D +K L+ +S Sbjct: 62 TVHDALGLGAAKVDTFYSAMDTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLKS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A+ FSG N + + A ++ F + A + Sbjct: 122 AAQSAS--------FSGEN--------WLYNGAAAALGTKSIVASF------NRSADGSV 159 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 VS++N + + D + A D + S Sbjct: 160 AVSTLNYDTAKSVLIDVADPARGML------TKAVDAD----------ALQSTPAGTARN 203 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 ++ + M+S V + +S + + A LG I + Sbjct: 204 YYLIDAGAAPAGATEIEIDSATTGAQLGDMISVVDELISQLTDSAATLGAITSRIEMQES 263 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ N ++ID + + + + + +L L + ++ +Q LSI N Sbjct: 264 FVANLMDVIDKGVGRLVDADMNEESTRLKALQTQQQLG------IQSLSIAN 309 >gi|330818577|ref|YP_004362282.1| flagellar hook-associated protein FlgL [Burkholderia gladioli BSR3] gi|327370970|gb|AEA62326.1| flagellar hook-associated protein FlgL [Burkholderia gladioli BSR3] Length = 409 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 53/406 (13%), Positives = 116/406 (28%), Gaps = 54/406 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+TS + + L L++++ +G ++ +++ Sbjct: 3 IATSQFYTQNIELMNNQESQISTLYQQVASGNLLQTPADNPLGAAQAVQLSATSATLSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L + LSS+ + +V L + G ++ A L+ ++ + Sbjct: 63 SANQNTALSALGLEDSTLSSVTGTLNSIVSRLSSAINGTMSDSDRAALASQLQGQRDTLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFT----------------KDSLAKKSFDQMLQG 168 + AN TD G Y+F+G S +P D+L+ D + Sbjct: 123 SLANTTDGAGNYIFAGFQGSSQPFTNSPAGGVTFSGDTGQRNVQISDTLSVAQGDSGVNV 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKD 228 FL S L + + +++ + + S + Sbjct: 183 FLSVPSTGSLPVPTGAAGNTGTGTIGAVTAGKPGDPTNNHAYTITFGGTSTAPTYTVTDN 242 Query: 229 TEGIDVSANVNMRGIRDI-------------------------------------MFVAV 251 + + +A Sbjct: 243 STTPPTTGAAQAYQAGSAIQVGSQSLVISGSPNAGDSFSLTPAPAAGADIFGALDAAIAA 302 Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + S + L+ V L+ I +A +G E + + + + Sbjct: 303 LKAPVGSDGAATASFVNSMSTALTKVNNSLANITTVQASVGGRETEVKAMQTITSSNALV 362 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S + TA QL + N + + +++Q LS+ YL Sbjct: 363 ATNSLSDLQQADMPTAITQLLQVQNALTAAQKAFSQVQNLSLFQYL 408 >gi|114330368|ref|YP_746590.1| flagellar hook-associated protein FlgL [Nitrosomonas eutropha C91] gi|114307382|gb|ABI58625.1| flagellar hook-associated protein 3 [Nitrosomonas eutropha C91] Length = 299 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST++++++ + KL +++ +G+ E Q + Sbjct: 3 VSTNTLYDQGTRSMLQQQSSLFKLQQQLSSGKRIMTPSDDPIGAARAHELSQSLALNTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L + L S+ ++Q + V +N+ + A LR +E + Sbjct: 63 ADNRYRAMDSLQQVDSTLGSVSNVIQSVRTMAVAAGNPAYSDNERQMMAVELRGHFEHLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPL 148 AN DE G YLFSG + +P Sbjct: 123 GLANTKDEQGNYLFSGFKGNTQPF 146 >gi|158321540|ref|YP_001514047.1| flagellar hook-associated protein 3 [Alkaliphilus oremlandii OhILAs] gi|158141739|gb|ABW20051.1| flagellar hook-associated protein 3 [Alkaliphilus oremlandii OhILAs] Length = 438 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 62/166 (37%), Gaps = 3/166 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + M + + + E TG+ +T +L+ + +++ +A+ Sbjct: 3 ITNNMMIANMTRNLQTNIRKLDRTQLEYNTGKKIHRPSDDPVGITRVLKIKSDRSELAQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTD---NNKFPINAGMLRDSYE 122 + + L ++ + + +V I+++G + + + Sbjct: 63 KKNVEDASSWLENTEGAILGLVSDTGTLVRLRDIMIQGANGTLTAEQTKNIQNEVAQIKQ 122 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQG 168 ++ N T G Y+FSG N+ + LN T + + D+ + Sbjct: 123 QIISMGNTTYSGNYIFSGKNTDKPLLNADGTYNINPTQFLDKGIVD 168 >gi|238788321|ref|ZP_04632115.1| Flagellar hook-associated protein 3 [Yersinia frederiksenii ATCC 33641] gi|238723567|gb|EEQ15213.1| Flagellar hook-associated protein 3 [Yersinia frederiksenii ATCC 33641] Length = 333 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 112/349 (32%), Gaps = 31/349 (8%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS I+++ ++ +++ TG+ + + Q + + Sbjct: 10 LSTSMIYQQTMQGVTNAQSLWMQSGQQLSTGKRVVNPSDDPMAASQAVMVSQSEAENGQY 69 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + S LS +Q + ++ + ++ A L+ + + Sbjct: 70 TLARSFARQSSSLETTVLSQATTTIQSIQSLIIGAAKDSLSDDDRASLATQLQGLKDQLL 129 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F G S P F + + ++ ++ + Sbjct: 130 NQANSTDGNGRYMFGGFKSDTPP----FLVSATGEVTYAGSDTPITQKVDSNRSMTVGHT 185 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 SS+ + + +D D N N D +K + ++ Sbjct: 186 GSSVFMALTKNAKPEPDDINGDPVASETNIFNTIDTVLKS-------LKTPLQGATDDVK 238 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + K + + L+ ++ +A +G + ++ Sbjct: 239 QQASAEM-------------------DKGIRGMANSLNNVLSVQAEIGTQLQELDSLDSL 279 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ I +S V+ ++A + ++ SY + +Q +S+ Sbjct: 280 GADRTLINKQRLSDLQDVDWNSAISSYVMQQAALQASYTTFSNMQGMSL 328 >gi|160876196|ref|YP_001555512.1| flagellar hook-associated protein FlgL [Shewanella baltica OS195] gi|160861718|gb|ABX50252.1| flagellar hook-associated protein 3 [Shewanella baltica OS195] gi|315268386|gb|ADT95239.1| flagellar hook-associated protein 3 [Shewanella baltica OS678] Length = 403 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 56/403 (13%), Positives = 138/403 (34%), Gaps = 53/403 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +S++ +F + + + K+ +++ +G+ + I Q+ + + Sbjct: 3 LSSAQLFNQSITSVLQKQTATSKILDQLSSGKKVNTAGDDPVASQGIDNLNQKNALVDQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T RL+ +++ L S + + + ++ + G + + A ++ S E + Sbjct: 63 MKNIDYATNRLAVTESKLGSAEDLTGSIREQVMRAINGTLSGTERQMIADEMKGSMEELL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ-----------MLQGFLEEN 173 + AN D G Y+FSG ++ ++P + S D + + + Sbjct: 123 SIANSKDESGNYMFSGFSTDKEPFAFDNSTPPKIVYSGDSGVRNSLVQTGVAMGTNIPGD 182 Query: 174 SKSLLAGQHLEVSSMN--AQQMTDF------IKQLEDKFSDDE--YWANNWSNAS----- 218 S + A L S+N A Q +F I +D + +N + + Sbjct: 183 SAFMKAPNGLGDYSVNYLASQQGEFSVKTAKIADTATYVADTYTFNFTDNGAGGTNLQVL 242 Query: 219 ------------------------DHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGT 254 D I + + + + I V+ Sbjct: 243 DSANNPVANVANFDATNPVSFNGIDVKIDGKPSAGDSFTMEPQAEVSIFDTISSAIVLIE 302 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 S N G ++L+ V G++ I R+V G + K + + + + Sbjct: 303 APNSANTPQG--RAQLAQILNNVDSGVNQISSARSVAGNNLKVVESYTETHTEEKVVNTS 360 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S ++ +A + + + +K+ +S+ +++ Sbjct: 361 ALSLLEDLDYASAITEFEKQQLALNAVSNVFSKVGSVSLFDFI 403 >gi|222834458|gb|EEE72935.1| predicted protein [Populus trichocarpa] Length = 470 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 53/136 (38%), Gaps = 17/136 (12%) Query: 23 NKDSVKLHEEMVTGQS----SDYGLQ----LGARVTSILEWEQEKNHIAERLHSNSLVTK 74 + + +++ TG+ SD + LG + + R +N+ + Sbjct: 289 QSKLLYVQQQLGTGRRILTPSDDPVAATRALGVAQAQSVN----GQYATTRKQANASLGL 344 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-E 133 +T Q+ +++ Q++ LV G + A L+ Y+ + AN D Sbjct: 345 EENTLQSVTTTI----QNIQSLLVNAGNGTMSDTDRASLATALQGQYDQLMGLANADDGN 400 Query: 134 GQYLFSGINSSEKPLN 149 G YLF+G+ ++ P Sbjct: 401 GNYLFAGLQANTVPFA 416 >gi|320107050|ref|YP_004182640.1| flagellin domain-containing protein [Terriglobus saanensis SP1PR4] gi|319925571|gb|ADV82646.1| flagellin domain protein [Terriglobus saanensis SP1PR4] Length = 299 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 55/186 (29%), Gaps = 1/186 (0%) Query: 12 FERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSL 71 + L+ K+ +EM TG + + + + S Sbjct: 8 TNSLVASLNSLSASQQKISQEMSTGLRLTSLGDDPLAAGQNETLTSAISQMDSFVKTVSN 67 Query: 72 VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT 131 V+ R+ + LSS + + + + + A L +S ++ AN + Sbjct: 68 VSNRMQAADTALSSTVTALDNALSLATAGANSTLTSTQLKSLAESLTSIRDSVLSLANSS 127 Query: 132 DEGQYLFSGINSSEKPLN-GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNA 190 +G +LF+G S +P T + S D Q + L Sbjct: 128 YQGNFLFAGTAISSQPFTLDDSTTPATVTYSGDDATQTVTSTTGQQLATSVPGSQLFGTG 187 Query: 191 QQMTDF 196 F Sbjct: 188 TANDVF 193 >gi|196249401|ref|ZP_03148099.1| flagellar hook-associated protein 3 [Geobacillus sp. G11MC16] gi|196211158|gb|EDY05919.1| flagellar hook-associated protein 3 [Geobacillus sp. G11MC16] Length = 297 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 67/215 (31%), Gaps = 19/215 (8%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ S + M + + ++ TG+ + + + + + Sbjct: 3 ITQSMLANNMLKQITRSYEKLDQYQTQLSTGKKITRPSEDPVVAMKGIAYRSNLAEVEQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + S + L + +Q + +V + + A +R E V Sbjct: 63 KRNFSEAYNWVENSDSALDKATQALQRIRELVVQASNDTYEETQRQAIAKEVRQLTEHLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLN---GYFTKDSLAKKSFDQMLQG-------FLEENSK 175 T AN +Y+F+G ++E P+ S + + L + Sbjct: 123 TIANTKVGDKYIFNGAQTTEPPVTVNADGTIAVSTNDQQLNIELAKGVYIPVNIPPSTAF 182 Query: 176 SLLAGQHLEVSSM---------NAQQMTDFIKQLE 201 G ++ + ++T ++ +L+ Sbjct: 183 GAGNGLFSDLQDLAASLENPSTTGDELTGYLDKLD 217 Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 43/125 (34%), Gaps = 3/125 (2%) Query: 236 ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQ---GLSGIIEQRAVLG 292 VN+ + ++ + + ++ + + L+ ++ RA LG Sbjct: 172 IPVNIPPSTAFGAGNGLFSDLQDLAASLENPSTTGDELTGYLDKLDNHLTHLLGVRAELG 231 Query: 293 ISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLS 352 I + + I +S + V+ L T + + + ++ + + Sbjct: 232 ARMNRIELMEDRIDGQQVIAQKVLSDNEDVDLEKVIIDLKTQESVHRAALAVGARIIQPT 291 Query: 353 ILNYL 357 ++++L Sbjct: 292 LVDFL 296 >gi|119899020|ref|YP_934233.1| flagellar hook-filament junction protein 3 [Azoarcus sp. BH72] gi|119671433|emb|CAL95346.1| flagellar hook-filament junction protein 3 [Azoarcus sp. BH72] Length = 420 Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 69/187 (36%), Gaps = 9/187 (4%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IST+ I+++ ++ + +++ TG+ +D + LE Q K Sbjct: 3 ISTNMIYDKGVGSMQQQWSSLLHTQQQLSTGRRVLTPADDPIA----SARALEVGQSKGV 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 ++ + + RL+ + L+ + +Q + V A LR + Sbjct: 59 NSQFMTNTGYADDRLNLLENKLTGVGDTLQYIREKTVSAGNAGYSAEDLKYIATDLRAQF 118 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + AN D G YLFSG ++ +P +G S Q +Q L G Sbjct: 119 DGLLALANSQDGTGDYLFSGYRANAQPFSGGLAGVSYQGDYGTQTIQVSASRYMPVSLPG 178 Query: 181 QHLEVSS 187 + ++ Sbjct: 179 TDVFAAT 185 Score = 36.2 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 6/87 (6%) Query: 274 LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI---IDTYISKSIGVEQHTAHAQ 330 L+ + L +++ RA +G + E L +++ IS + V+ +A + Sbjct: 336 LTNLDGALENVLKVRAQIG---SQLTETESLLNIGSDLDVQYAETISNLVDVDYVSAISN 392 Query: 331 LSTLINKIEMSYMITTKLQKLSILNYL 357 L+ ++ + K+ LS+ NYL Sbjct: 393 LTQQQTYLQAAQQSFMKVTGLSLFNYL 419 >gi|213622268|ref|ZP_03375051.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 168 Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 65/160 (40%), Gaps = 1/160 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++E+ + +KL E+M TG+ + + Q + ++ Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLFQAQAQNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S ++ LS + +Q +V G ++ A L+ + + Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ 164 AN TD G+Y+F+G + P + +KS Q Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQ 162 >gi|158604969|gb|ABW74784.1| flagellar hook-associated protein [Campylobacter concisus 13826] Length = 771 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 34/99 (34%) Query: 52 ILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFP 111 + + E + + + + L +K +++ +V Sbjct: 49 AMRLDYEATTLTQVADATGKSVNFAKNTDNALKEFEKQLENFKTKVVQAASDVHSTTSLE 108 Query: 112 INAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNG 150 A L+ V AN + GQ+LFSG KP++G Sbjct: 109 ALANDLQGIKNHLVNIANTSINGQFLFSGSAVDTKPIDG 147 Score = 37.8 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 37/96 (38%) Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 RN + L + + ++ +G K + + + + T + I Sbjct: 675 NHDPRNTGMQGALKRLDHLVDHANKELTKIGSQTKLLTSTKERAEIMKVNVLTVKNDVID 734 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ + + L + + + K+ +LS+LNYL Sbjct: 735 ADYAESYLKFTQLSLSYQATLQASAKINQLSLLNYL 770 >gi|121586238|ref|ZP_01676028.1| flagellar hook-associated protein FlgL [Vibrio cholerae 2740-80] gi|121549504|gb|EAX59530.1| flagellar hook-associated protein FlgL [Vibrio cholerae 2740-80] Length = 208 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 58/148 (39%), Gaps = 9/148 (6%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G+ SD L I Q++ Sbjct: 5 ISSFHNYQAVQNDIRRQESKVFNNQAQLASGKKLLSASDNPLA----THYIQNVGQQEEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + L + LV RL + +S+ ++ ++ ++ G A +L++ Sbjct: 61 LRQYLDAIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMA 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL 148 +F+ AN+ D G Y+F+G +P Sbjct: 121 NNFINLANVQDESGNYIFAGTKPKNQPF 148 >gi|260767762|ref|ZP_05876697.1| flagellar hook-associated protein FlgL [Vibrio furnissii CIP 102972] gi|260617271|gb|EEX42455.1| flagellar hook-associated protein FlgL [Vibrio furnissii CIP 102972] gi|315179406|gb|ADT86320.1| flagellar hook-associated protein FlgL [Vibrio furnissii NCTC 11218] Length = 397 Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 50/400 (12%), Positives = 123/400 (30%), Gaps = 55/400 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G+ +D L I Q++ Sbjct: 5 ISSFHNYQAVQNDLRRQESKIHHNQAQLASGKKLLSAADNPLA----THYIQNVSQQQEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + + + LV RL + +SS + ++ ++ G A L + Sbjct: 61 LRQYMDAIVLVRNRLEHQEVIVSSAEDFTDKAKRNVMEMINGSLSPEDRAARARELEEIA 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL------------NGYF--------------TK 154 +F+ AN+ D G Y+F+G + +P + Y T Sbjct: 121 NNFLNLANVQDESGNYIFAGTKPTTQPFFRDNAGNVSYGGDDYQRKMKISNSLEMPFNTP 180 Query: 155 DSLAKKSFDQMLQGFLE-----ENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKF----- 204 S + + E S+ LL + + + F+ KF Sbjct: 181 GSKLFMEIENPFGDYEPNYQLREGSELLLEKANNSNPDDDGEYKVTFVDMTNGKFGYQLE 240 Query: 205 -------SDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 +D+ ++ +K + ++ R + F Sbjct: 241 RNGRVVDTDEFNPKTGI---QYEDLTIHVKGQLTAGDAISLTPRQSFSVFDTFKDAINFS 297 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 +++D + ++M + + R +G ++ + + + S Sbjct: 298 KASVSDASATAKLQQMTQEFHTAFIHMNKARTDIGARLSTLDIQEEQHADFKISLAKSKS 357 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ A + + ++ S K + L++ NY+ Sbjct: 358 QFEDLDYAEAVIEFNENSRALQASQQAFGKTKDLTLFNYI 397 >gi|90415311|ref|ZP_01223245.1| Flagellin, N-terminus [marine gamma proteobacterium HTCC2207] gi|90332634|gb|EAS47804.1| Flagellin, N-terminus [marine gamma proteobacterium HTCC2207] Length = 307 Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 58/357 (16%), Positives = 104/357 (29%), Gaps = 58/357 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS IFER L ++ TGQ + I N Sbjct: 3 VSTSQIFERAMTQMSNQQAKVADLQSKLATGQQIARPSDDPEKAGVIQRLSSALNRQEGF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + RL + L S + I+Q M V + I A + + + Sbjct: 63 ESNLMAFKSRLGAEEGALKSAENILQRMRELAVQAQSDTFSSADRQIIAAEVSALRDQML 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN D G Y+F+G S P EN ++ G Sbjct: 123 SLANTADASGNYIFAGAMVSSAPFGE--------------------NENGDTVYQGDDSR 162 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + Q + + E N G Sbjct: 163 MMLDVSAQRQLSLNKP---------------------------GNEIFSSVIRENSDGSS 195 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRA-VLGISEKNINEERV 303 + + I +F + ++ + +S + E A L +N Sbjct: 196 ERVEFFTIIDDFTAALESNDTTQMAFS------LSEISDLTETMALSLADVGGRVNTADS 249 Query: 304 FLQNKNNI---IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L+ T +S++ ++ TA +L++ I +E K+ +LS+ +Y+ Sbjct: 250 QLEALAETNLRYKTLLSQAQDLDYTTAITELTSEIMSLEAGQSSFIKIAQLSLFDYI 306 >gi|221639488|ref|YP_002525750.1| Flagellar hook-associated protein 3 [Rhodobacter sphaeroides KD131] gi|221160269|gb|ACM01249.1| Flagellar hook-associated protein 3 [Rhodobacter sphaeroides KD131] Length = 409 Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 82/301 (27%), Gaps = 29/301 (9%) Query: 71 LVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANM 130 + R L + V + D + LR + Sbjct: 123 ALANRKDAMGQGLFAGYAAGPAFVKEGDAVRFAGNDGQPVAQLSETLRVA---------T 173 Query: 131 TDEGQYLFSGINSSEKPLNGYFTKD------------SLAKKSFDQMLQGFLEENSKSLL 178 + G +F + + P + + D S ++S + + Sbjct: 174 SLGGAEVFMAVPTEAGPRSVFDLADDLVATLSVPLAHSSPQRSAEDA-ARLSLAAPPAPA 232 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 + + + ++ + + + + + + I VS Sbjct: 233 TVRFTLTGPVGSVEIEQRLPGSALAAINAASAQTGVTATEEPDGTLVLGAVGRITVSDMS 292 Query: 239 NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKM--LSTVQQGLSGIIEQRAVLGISEK 296 RD++ + + L +S + EQRA G Sbjct: 293 RSDDPRDVLATFTSAEDEGGWIMP-----ALFDAASLTDAFDAAVSHMAEQRARAGALAA 347 Query: 297 NINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 +++ + ++ + I T I ++ A +L L+ E + K+ S+ +Y Sbjct: 348 SVDTQADAIKTRQTRIATAIGGLEDLDVAEAVTRLQQLLLTQEAAQQTYVKIANRSLFDY 407 Query: 357 L 357 L Sbjct: 408 L 408 >gi|331017017|gb|EGH97073.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 530 Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ FE N + + +K +E+ +G + +L+ Q+ + + + Sbjct: 3 ISTTQFFESTNANYQRNYANVIKTGDEVTSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + S+ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQAAREVVVSAGNGAYTDSDRLAKAAELKQYQSQIL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+F+G SS P Sbjct: 123 GLMNSQDANGQYIFAGSKSSAPP 145 >gi|238755318|ref|ZP_04616661.1| Flagellar hook-associated protein 3 [Yersinia ruckeri ATCC 29473] gi|238706454|gb|EEP98828.1| Flagellar hook-associated protein 3 [Yersinia ruckeri ATCC 29473] Length = 322 Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 35/274 (12%), Positives = 86/274 (31%), Gaps = 29/274 (10%) Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYLFS 139 LS + VQ + ++ + ++ A L+ + + AN TD G+Y+F+ Sbjct: 72 TVLSQVTSTVQQIQTLVISASKDSLSDDDRASYATQLQGLKDQLLNQANSTDGNGRYMFA 131 Query: 140 GINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQ 199 G + P ++ K D + +S +A H + + Sbjct: 132 GFKNDTIPFVADPVTGAVTYKGGDVAQTQ--QVDSSRSMAVGHTGSGVFTSLTANSRPEP 189 Query: 200 LEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSK 259 + +N N D +K + ++ Sbjct: 190 TDPVTGATPASESNIFNTIDTVLKS-------LKTPMAGASDAVKQQASAE--------- 233 Query: 260 NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKS 319 K + + L+ ++ +A +G + ++ ++ + +S Sbjct: 234 ----------LDKGIRGLDNSLNNMLSVQAEIGTQLQELDSLDSLGSDRTLVNKQRLSDL 283 Query: 320 IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + V+ + A + ++ SY + +Q +S+ Sbjct: 284 VDVDWNAAISSYVMQQAALQASYKSFSDMQGMSL 317 >gi|268679601|ref|YP_003304032.1| flagellin domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268617632|gb|ACZ11997.1| flagellin domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 801 Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 63/193 (32%), Gaps = 3/193 (1%) Query: 52 ILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFP 111 + E + + + S+S + L+S + + L Sbjct: 49 AMRLNYEITTLEQSIESSSKAKSFANNIDTTLNSFTSKLDEFKTKLTQAANASNSQTSLE 108 Query: 112 INAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGF-- 169 A L E + AN + GQ+LFSG S KP++ T + A+ + G Sbjct: 109 AIANDLEAYKEELINLANTSINGQFLFSGSALSTKPISADGTYNGNAESLTAVVGSGVEL 168 Query: 170 -LEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKD 228 + KSL G+ + S + + + + + D + S+ I+D Sbjct: 169 TYNVDGKSLFLGKDSDYSKVVSTNVAMYNQTKLHPSIMDASGTDTSSSEVYLTGTDTIRD 228 Query: 229 TEGIDVSANVNMR 241 G S N Sbjct: 229 MVGDTDSDTTNDP 241 Score = 43.5 bits (101), Expect = 0.052, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 69/165 (41%), Gaps = 1/165 (0%) Query: 193 MTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVI 252 M + + +FS + A+ + S + + D+ I+ S +VNM D M AV Sbjct: 638 MDKTASESKIEFSLSDSDAHTFDGTSSTALSFMANDSVTIE-SPSVNMFEQLDTMIEAVR 696 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 F + + RN+ + L+ + + + +G + E + + + Sbjct: 697 SGNFRMDSTSSDPRNIGIQNALAQLDHITDHVTKAHTQIGALSNALTETQARAETLKVNV 756 Query: 313 DTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 T ++ +G++ A+ +L+ + N E K+ +S+L+Y+ Sbjct: 757 TTVQTEIVGIDLAEAYLELTQVSNSYEAMLSAIAKVNSMSLLDYM 801 >gi|71733470|ref|YP_275554.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. phaseolicola 1448A] gi|289627771|ref|ZP_06460725.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651638|ref|ZP_06482981.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. aesculi str. 2250] gi|298487848|ref|ZP_07005888.1| Flagellar hook-associated protein flgL [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71554023|gb|AAZ33234.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157573|gb|EFH98653.1| Flagellar hook-associated protein flgL [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325101|gb|EFW81170.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. glycinea str. B076] gi|320329360|gb|EFW85353.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. glycinea str. race 4] gi|330866431|gb|EGH01140.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330986476|gb|EGH84579.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. lachrymans str. M301315] Length = 530 Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +E N + + +K EE+ +G + +L+ Q+ + + + Sbjct: 3 ISTTQFYESTNTNYQRTYSNVLKTSEEVSSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + S+ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQTAREVIVSAGNGAYTDSDRLAKAAELKQYQSQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+F+G SS P Sbjct: 123 GLMNSQDSNGQYIFAGSKSSAPP 145 >gi|296535170|ref|ZP_06897392.1| flagellin domain protein [Roseomonas cervicalis ATCC 49957] gi|296264498|gb|EFH10901.1| flagellin domain protein [Roseomonas cervicalis ATCC 49957] Length = 364 Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 41/357 (11%), Positives = 110/357 (30%), Gaps = 28/357 (7%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + I+ SS + L ++N+ +++ TG GA + + + Sbjct: 1 MANSVITNSSAKVALQSL-NKINQQLDTTQKKVSTGYKVSDAKDDGAAYAVAQKVRADVS 59 Query: 61 HIAERLH----SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGM 116 + N L+T L A +++ V +++ L +D+N Sbjct: 60 GLNSANDQLGGVNGLLTSTLKAVDAVSTTLTSEVSNVLTKL-------SDSNLDAETRKQ 112 Query: 117 LRDSYESFVTFANM-----TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLE 171 + ++S N + G L ++ PL G + + + ++ Q + Sbjct: 113 YTEQFKSLTKQMNTTLQDASYNGTRLLGSTDTD--PLTGQPFEGKPMEVTRNEKGQTYTV 170 Query: 172 ENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEG 231 S + S + + +A + A+ + I + Sbjct: 171 NASGTTADQLSFTASIGGGASAAVPAPAVAADGPNVASFATGSNVATSS--EGAIPASGS 228 Query: 232 IDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVL 291 +D +++ + ++ ++V ++ L + A + Sbjct: 229 LDSITSISAAEAKALLQGRAEVQTDPGPPPVTEMQDVDMVQIGGAGGAVLKTFVSLTAQV 288 Query: 292 GISEKNINEERVFLQNKNNIIDTYISKSI-------GVEQHTAHAQLSTLINKIEMS 341 ++ + + F+ ++ I + A+L+ L + +++ Sbjct: 289 NSTQNELGNDSKFISSQMTYNSARIDAMEEGLGSLVDADLAKESARLTALQTQQQLA 345 >gi|15596284|ref|NP_249778.1| flagellar hook-associated protein FlgL [Pseudomonas aeruginosa PAO1] gi|218892949|ref|YP_002441818.1| flagellar hook-associated protein FlgL [Pseudomonas aeruginosa LESB58] gi|9947003|gb|AAG04476.1|AE004539_18 flagellar hook-associated protein type 3 FlgL [Pseudomonas aeruginosa PAO1] gi|218773177|emb|CAW28989.1| flagellar hook-associated protein type 3 FlgL [Pseudomonas aeruginosa LESB58] Length = 439 Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 47/144 (32%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST F D + E+ G+ +L+ QE+ ++ Sbjct: 3 ISTIQAFNNSVSGISRNYADLTRTQAEISAGKRLLTPADDPVGAVRLLQLNQEQALNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L + L+S+ ++ + V G D + A L + + Sbjct: 63 KSGITAAKNSLQQEETILNSVGTVIHRIREIAVQAGNGGLDASDKNALATELAQREDELL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL 148 N D G+YLFSG +P Sbjct: 123 NLLNSRDASGKYLFSGSQGDTQPF 146 Score = 39.7 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 41/107 (38%), Gaps = 1/107 (0%) Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 + + + R+ + +S + S I+ + +G F+ + Sbjct: 333 ALLSAEDTPAGNLAIRDAV-GVAISNLDSSNSQILTGQGRIGARMNVAESTETFIDDVTL 391 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + IS+ ++ A ++L+ ++ + K++ LS+ NYL Sbjct: 392 VNTAVISQIQDLDYPEALSRLTLQSTIMDAAQQSFVKIRGLSLFNYL 438 >gi|189426323|ref|YP_001953500.1| flagellar hook-associated protein 3 [Geobacter lovleyi SZ] gi|189422582|gb|ACD96980.1| flagellar hook-associated protein 3 [Geobacter lovleyi SZ] Length = 299 Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 38/356 (10%), Positives = 105/356 (29%), Gaps = 65/356 (18%) Query: 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHI 62 T+ S ++ + +++E++ +G++ + ++ + + Sbjct: 8 TSQNSLYNLQNSRTL--------LDQINEKIASGKNYNRPSDDPIAARQLVNFADQLRAG 59 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + + + L ++ L M + ++ L G L+ + Sbjct: 60 EQYSSNMTKANTWLKVTETALEGMSATLSEIKKLTSTLTNGTDITAVRDNAVSQLKTYKQ 119 Query: 123 SFVTFANMTDEGQYLFSGI-NSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 + + N + +Y+F+G N+S P NG + + L Sbjct: 120 QLIDYGNTQLDDRYVFAGTDNASTAPFNGSTFSGNDTSIDIE--------------LNTS 165 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 + ++ ++ + ++ + + + + + N Sbjct: 166 STQAINITGGRVLKGTNGVPYQYGSTDILTEL----------------DNLITAVSTNNT 209 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 E + + DGA+ I A +G I Sbjct: 210 A----------NIEAGALKMEDGAKQ----------------IENAIADVGGRLTRIKTM 243 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + F ++I ++ + +L E + T K+ ++S+L+Y+ Sbjct: 244 QQFNTTTKSVIQGVVANLQNADYTKLAVELQQQQLAFEATLSTTAKVSQMSLLDYM 299 >gi|327478816|gb|AEA82126.1| flagellar hook-associated protein FlgL [Pseudomonas stutzeri DSM 4166] Length = 302 Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 1/145 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS + I M+ ++ KL ++M +GQ +L ++E+ + + Sbjct: 3 ISNAQITAMMHGSLNNSSEKLGKLMQQMASGQRMLVPSDDPISAVRVLRIQREEASLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + V+ LS +A+L + + + L+ G A L + + Sbjct: 63 RTNIANVSGNLSKQEANLKAASDSMLSIRDLLLWAANGSNTGEDLSAIANELESLENTVL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLN 149 +FAN+ DE G+YLFSG S++ + Sbjct: 123 SFANVRDEEGRYLFSGTRSNQPAIA 147 >gi|28869149|ref|NP_791768.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. tomato str. DC3000] gi|28852389|gb|AAO55463.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. tomato str. DC3000] Length = 530 Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ FE N + + +K +E+ +G + +L+ Q+ + + + Sbjct: 3 ISTTQFFESTNANYQRNYANVIKTGDEVTSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + S+ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQAAREVVVSAGNGAYTDSDRLAKAAELKQYQSQIL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+F+G SS P Sbjct: 123 GLMNSQDANGQYIFAGSKSSAPP 145 >gi|254234223|ref|ZP_04927546.1| flagellar hook-associated protein type 3 FlgL [Pseudomonas aeruginosa C3719] gi|126166154|gb|EAZ51665.1| flagellar hook-associated protein type 3 FlgL [Pseudomonas aeruginosa C3719] Length = 439 Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 47/144 (32%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST F D + E+ G+ +L+ QE+ ++ Sbjct: 3 ISTIQAFNNSVSGISRNYADLTRTQAEISAGKRLLTPADDPVGAVRLLQLNQEQALNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L + L+S+ ++ + V G D + A L + + Sbjct: 63 KSGITAAKNSLQQEETILNSVGTVIHRIREIAVQAGNGGLDASDKNALATELAQREDELL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL 148 N D G+YLFSG +P Sbjct: 123 NLLNSRDASGKYLFSGSQGDTQPF 146 Score = 39.7 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 41/107 (38%), Gaps = 1/107 (0%) Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 + + + R+ + +S + S I+ + +G F+ + Sbjct: 333 ALLSAEDTPAGNLAIRDAV-GVAISNLDSSNSQILTGQGRIGARMNVAESTETFIDDVTL 391 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + IS+ ++ A ++L+ ++ + K++ LS+ NYL Sbjct: 392 VNTAVISQIQDLDYPEALSRLTLQSTIMDAAQQSFVKIRGLSLFNYL 438 >gi|307823538|ref|ZP_07653767.1| flagellar hook-associated protein 3 [Methylobacter tundripaludum SV96] gi|307735523|gb|EFO06371.1| flagellar hook-associated protein 3 [Methylobacter tundripaludum SV96] Length = 427 Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 50/151 (33%), Gaps = 1/151 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ + L +++ TG IL+ ++ + + Sbjct: 3 ISTAWAQQLSVTAMSNQQSKLANLQQQLSTGVKVSVPADDPGAAARILDLDKTIDKTKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 ++ + RL+ ++ L++ I+ + + ++N + + Sbjct: 63 QNNIATTRGRLNIEESALATSGGILDRARDLTIQAMNDTLNSNDRLGIKTEVDQLIQQLA 122 Query: 126 TFANM-TDEGQYLFSGINSSEKPLNGYFTKD 155 AN G+++FSG S+ T Sbjct: 123 GVANTQNANGEFIFSGDLSNVPAFTKNATTG 153 >gi|153001465|ref|YP_001367146.1| flagellar hook-associated protein FlgL [Shewanella baltica OS185] gi|151366083|gb|ABS09083.1| flagellar hook-associated protein 3 [Shewanella baltica OS185] Length = 403 Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 77/186 (41%), Gaps = 1/186 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +S++ +F + + + K+ +++ +G+ + I Q+ + + Sbjct: 3 LSSAQLFNQSITSVLQKQTATSKILDQLSSGKKVNTAGDDPVASQGIDNLNQKNALVDQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T RL+ +++ L S + + M ++ + G + + A ++ S E + Sbjct: 63 MKNIDYATNRLAVTESKLGSAEDLTGSMREQVMRAINGTLSGTERQMIADEMKGSLEELL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN D G Y+FSG ++ ++P + S D ++ L + ++ + Sbjct: 123 SIANSKDESGNYMFSGFSTDKEPFAFDNSTPPKIVYSGDSGVRNSLVQTGVAMGTNIPGD 182 Query: 185 VSSMNA 190 + M A Sbjct: 183 SAFMKA 188 >gi|90577351|ref|ZP_01233162.1| flagellar hook-associated protein [Vibrio angustum S14] gi|90440437|gb|EAS65617.1| flagellar hook-associated protein [Vibrio angustum S14] Length = 299 Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 109/307 (35%), Gaps = 57/307 (18%) Query: 52 ILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFP 111 +L ++E + I++ + S V LS+ + HL + ++DM L++ G + Sbjct: 49 LLNLDRENSAISQYQDNISNVKTALSSQEVHLMAASDTLKDMRDTLLLASNGAISDADRE 108 Query: 112 INAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFL 170 A L ++F++ N+ DE G YLFSG S + A+ + + +G Sbjct: 109 SYANKLVSLRDAFMSSFNVQDEEGNYLFSGTQSDVPAIT--------AQPAGGYIFEGNS 160 Query: 171 EENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 ++ ++ G +E ++ +Q+M D +NI +I Sbjct: 161 DKRVVTVAKGVTIE-ANFASQEMLDL---------------------GGNNILNQIDAAI 198 Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 + N L + + L +T+ ++ Sbjct: 199 TELQAPTAN---------------------LNNTLQATL-----NTLDITHDNVLAAVTD 232 Query: 291 LGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 +G N++ + ++ + ++ A +L+ + ++ + K+ Sbjct: 233 IGGRHNNLDLMETSHGDNKLFVEAVTNDLEALDYGEASVRLNNYMAALQATQASYMKIND 292 Query: 351 LSILNYL 357 LS+ N L Sbjct: 293 LSLFNRL 299 >gi|116049016|ref|YP_792182.1| flagellar hook-associated protein FlgL [Pseudomonas aeruginosa UCBPP-PA14] gi|296390549|ref|ZP_06880024.1| flagellar hook-associated protein FlgL [Pseudomonas aeruginosa PAb1] gi|115584237|gb|ABJ10252.1| flagellar hook-associated protein type 3 FlgL [Pseudomonas aeruginosa UCBPP-PA14] Length = 439 Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 47/144 (32%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST F D + E+ G+ +L+ QE+ ++ Sbjct: 3 ISTIQAFNNSVSGISRNYADLTRTQAEISAGKRLLTPADDPVGAVRLLQLNQEQALNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L + L+S+ ++ + V G D + A L + + Sbjct: 63 KSGITAAKNSLQQEETILNSVGTVIHRIREIAVQAGNGGLDASDKNALATELAQREDELL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL 148 N D G+YLFSG +P Sbjct: 123 NLLNSRDASGKYLFSGSQGDTQPF 146 Score = 39.7 bits (91), Expect = 0.65, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 41/107 (38%), Gaps = 1/107 (0%) Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 + + + R+ + +S + S I+ + +G F+ + Sbjct: 333 ALLSAEDTPAGNLAIRDAV-GVAISNLDSSNSQILTGQGRIGARMNVAESTETFIDDVTL 391 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + IS+ ++ A ++L+ ++ + K++ LS+ NYL Sbjct: 392 VNTAVISQIQDLDYPEALSRLTLQSTIMDAAQQSFVKIRGLSLFNYL 438 >gi|261420581|ref|YP_003254263.1| flagellar hook-associated protein FlgL [Geobacillus sp. Y412MC61] gi|319768251|ref|YP_004133752.1| flagellar hook-associated protein 3 [Geobacillus sp. Y412MC52] gi|261377038|gb|ACX79781.1| flagellar hook-associated protein 3 [Geobacillus sp. Y412MC61] gi|317113117|gb|ADU95609.1| flagellar hook-associated protein 3 [Geobacillus sp. Y412MC52] Length = 297 Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 10/196 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ S + + K ++ TG+ + + + + Sbjct: 3 ITQSMLANNTLKQITRSYANLDKYQTQLSTGKKITRPSDDPVVAMKGIAYRSNLAEVEQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + S + L + +Q + +V + + A +R E V Sbjct: 63 KRNFSEAYNWVENSDSALDKATQALQRIRELVVQASNDTYEETQRQSIAKEVRQLTEHLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLN---GYFTKDSLAKKSFDQMLQG-------FLEENSK 175 T AN +Y+F+G ++E P+ S + + L + Sbjct: 123 TIANTKVGDKYIFNGAKTTEPPVTVNPDGTISVSTNSQQLNIELAKGIYIPVNIPPSTAF 182 Query: 176 SLLAGQHLEVSSMNAQ 191 +G ++ ++ A Sbjct: 183 GAGSGLFSDLQNLAAS 198 Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 35/84 (41%) Query: 274 LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLST 333 L + L+ ++ RA LG I + ++ I + +S + V+ L T Sbjct: 213 LDKLDSHLTNLLGVRAELGARMNRIELMEDRIDSQQVIAEKMLSDNEDVDLEKVITDLKT 272 Query: 334 LINKIEMSYMITTKLQKLSILNYL 357 + + + ++ + +++++L Sbjct: 273 QESVHRAALAVGARVIQPTLVDFL 296 >gi|154175012|ref|YP_001408167.1| lagellar hook-associated protein FlgL [Campylobacter curvus 525.92] gi|112802834|gb|EAU00178.1| bacterial flagellin N-terminus domain protein [Campylobacter curvus 525.92] Length = 740 Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 37/99 (37%) Query: 52 ILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFP 111 + + E +++ + + S + L +K +++ +V Sbjct: 49 AMRLDYEAETLSQVVEATSKSVNFSKNTDKSLQEFEKQLENFKTKVVQAASDVHSKTSLE 108 Query: 112 INAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNG 150 A L+ V AN + GQ+LFSG KP++G Sbjct: 109 ALANELQGIKNHLVNIANTSINGQFLFSGSAVDTKPIDG 147 Score = 37.4 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 33/96 (34%) Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 RN + L + + ++ +G K I + T ++ I Sbjct: 645 NGDPRNTGMQGALERLDHLIDHANKELTKVGSQTKLITSTNERASLMKVNVLTVKNEVID 704 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + A+ + + + K+ +LS+LNYL Sbjct: 705 ADYAEAYLNFTQKTLSYQAMLQASAKINQLSLLNYL 740 >gi|213967574|ref|ZP_03395722.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. tomato T1] gi|301385721|ref|ZP_07234139.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. tomato Max13] gi|302060066|ref|ZP_07251607.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. tomato K40] gi|302134825|ref|ZP_07260815.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927875|gb|EEB61422.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. tomato T1] Length = 530 Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ FE N + + +K +E+ +G + +L+ Q+ + + + Sbjct: 3 ISTTQFFESTNANYQRNYANVIKTGDEVTSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + S+ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQAAREVVVSAGNGAYTDSDRLAKAAELKQYQSQIL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+F+G SS P Sbjct: 123 GLMNSQDANGQYIFAGSKSSAPP 145 >gi|330447911|ref|ZP_08311559.1| flagellar hook-associated protein 3 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492102|dbj|GAA06056.1| flagellar hook-associated protein 3 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 299 Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 108/307 (35%), Gaps = 57/307 (18%) Query: 52 ILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFP 111 +L E+E + I + + + V LS+ + HL + +++M L++ G + Sbjct: 49 LLNLERENSAINQYQDNINNVKTALSSQEVHLMAASDTLKEMRDTLLLASNGAISDADRE 108 Query: 112 INAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFL 170 A L ++F++ N+ DE G YLFSG S + A+ + + +G Sbjct: 109 SYANKLVSLRDAFMSSFNVQDEEGNYLFSGTQSDVPAIT--------AQPAGGYIFEGNS 160 Query: 171 EENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 ++ ++ G +E ++ +Q+M D +NI +I Sbjct: 161 DKRVVTVAKGVTME-ANFASQEMLDL---------------------GGNNILNQIDAAI 198 Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 + N L + + L +T+ ++ Sbjct: 199 TELQAPTAN---------------------LNNTLQATL-----NTLDITHDNVLAAVTD 232 Query: 291 LGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 +G N++ + ++ + ++ A +L+ + ++ + K+ Sbjct: 233 IGGRHNNLDLMETSHGDNKLFVEAVTNDLEALDYGEASVRLNNYMAALQATQASYMKIND 292 Query: 351 LSILNYL 357 LS+ N L Sbjct: 293 LSLFNRL 299 >gi|328470108|gb|EGF41019.1| flagellar hook-associated protein FlgL [Vibrio parahaemolyticus 10329] Length = 299 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 116/355 (32%), Gaps = 65/355 (18%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVT----GQSSDYGLQLGARVTSILEWEQEKNH 61 IS + + M + + K+ ++M T + SD + +L E+E + Sbjct: 3 ISDNQFSQMMLQSLQSNSAGLGKVLQQMSTRERLTKLSDDPMA----SIKLLNLERENSA 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 IA+ + + + LS+ + HL S+ + ++ M ++ G + L+ Sbjct: 59 IAQYQSNIANLKTTLSSQETHLDSVSESLKSMRDIVLWGANGSLTDQDRSGMITELKSYR 118 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S + N DE G +LFSG + LN ++S + + Sbjct: 119 DSIESSFNAQDEEGHFLFSGTKTDTAALN----------------------KSSGAYVVE 156 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 + +V + A + + E +D+ N+ Sbjct: 157 GNSDVRVVTV--------------------------AKGVTMDSNMTAQEILDIGGGKNV 190 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 + + + EF + L+ + ++ ++ +G N++ Sbjct: 191 -----LNQIDALIAEFEKPSPN---FQAEVDASLNAIDDTMANVLGAMTEIGGRHNNLDL 242 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 +D ++ A +LS + ++ + K+ LS+ + Sbjct: 243 MDGAHSENKLFVDKVSGDLSALDYGEASVRLSNYMAALQATQASYVKINDLSLFD 297 >gi|95929884|ref|ZP_01312625.1| flagellin-like [Desulfuromonas acetoxidans DSM 684] gi|95134180|gb|EAT15838.1| flagellin-like [Desulfuromonas acetoxidans DSM 684] Length = 641 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 40/84 (47%) Query: 274 LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLST 333 L+ ++ G+ R+++G + I + ++ + +S+ V+ +++ Sbjct: 558 LARLETSADGVRSSRSLMGNNAARIETSKDHMEGVLIDLQQILSRYEDVDLIDVITEITQ 617 Query: 334 LINKIEMSYMITTKLQKLSILNYL 357 +E + +T ++ +LSILNYL Sbjct: 618 TETALEAALSVTGRVGQLSILNYL 641 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 3/150 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK+T +T +N +N L + TG+ + A + +L + Sbjct: 1 MKSTQATTF---RTLNSELNSINNQLENLRTQEATGKKLNRPSDDPAAIRPVLSARTQIR 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + S RL ++L + ++ + + + + A + Sbjct: 58 ASERFISSMETSLDRLDNLDSYLDQAENLLVNAKETTINAINASMSDADMETLADSINYV 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNG 150 S ++ AN GQY+F+G P Sbjct: 118 KTSLMSVANAQVGGQYIFAGYLEDTPPFTE 147 >gi|157959895|ref|YP_001499929.1| flagellar hook-associated protein 3 [Shewanella pealeana ATCC 700345] gi|157844895|gb|ABV85394.1| flagellar hook-associated protein 3 [Shewanella pealeana ATCC 700345] Length = 305 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 72/204 (35%), Gaps = 7/204 (3%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +S +++ + D +L+E M TG S ++ E++ + Sbjct: 3 VSMHNLYANNLQSLQNSTVDIARLNEMMATGSSILRPSDDPIGAVKVMGNERDMAATEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 L + ++ ++ ++SSM ++ M V G A L + ESF Sbjct: 63 LKNTESLSSSFGRAETYMSSMVELQNRMREITVSASNGSLSAEDRTAYAAELEELLESFS 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL-----NGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 N D G YLFSG + P+ Y + + + ++ NS + Sbjct: 123 DVLNAKDEGGNYLFSGNETDTPPIGKDAAGNYVYQGDTSHREVQTSSSSWMTANSTAADF 182 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDK 203 + + Q DFI LED Sbjct: 183 IFSNGSADI-LNQTKDFIDALEDP 205 >gi|304438223|ref|ZP_07398165.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368830|gb|EFM22513.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 444 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 5/130 (3%) Query: 76 LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKF--PINAGMLRDSYESFVTFANMTDE 133 ++T+Q LSSM+ I + + D N P A ++ + V+ N Sbjct: 73 MNTTQTALSSMEDIQKTFKAKTIQGANDDKDENGGDWPAIAREMKAEIQQIVSLGNTQLG 132 Query: 134 GQYLFSGINSSEKPLNGYFTKDS---LAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNA 190 +Y+FSG +P + K+ D F + S A ++ S++ Sbjct: 133 DRYIFSGQADLRQPFSISDENKPLLRGVAKTLDDRQAAFFNDASNDKSANFLHQMISLDG 192 Query: 191 QQMTDFIKQL 200 ++ Sbjct: 193 SDGENYYMNT 202 Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 29/89 (32%) Query: 269 LTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAH 328 L+ +S ++ G + L + I I+ + Sbjct: 355 LSSDGISLADAANQVTLQAHTETGARTQLYKNMTDVLTDYKENITRDITNVSSADVAELA 414 Query: 329 AQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + MS + ++ LS+++YL Sbjct: 415 MKMMQQQTVMSMSLSMGARILPLSLVDYL 443 >gi|12057229|gb|AAB81422.2| FlaD [Sinorhizobium meliloti] Length = 321 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 111/352 (31%), Gaps = 44/352 (12%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T+ + +N + + +G + A + + ++ Sbjct: 2 TSIMTNPAAMAALQTLRAINHNLETTQGRISSGFRVETAADNAAYWSIATTMRSDNAALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T + + ++ ++ ++ LV E D +K L+ S Sbjct: 62 TVHDALGLGAAKVDTFYSAMDTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLNS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A+ FSG N + + A ++ F + A + Sbjct: 122 AAQSAS--------FSGEN--------WLYNGAAAALGTKSIVASF------NRSADGSV 159 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 VS++N + + D + + D + + + R Sbjct: 160 TVSTLNYDTAKSVLIDVTDP---------------SRGMLTKAVDADALQSTPTGTARNY 204 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 ++ + + M+S V + +S + + A LG I + Sbjct: 205 -YLIDAGAAPGGATEIEIDNATTGAQLGDMISVVDELISQLTDSAATLGAITSRIEMQES 263 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ N ++ID + + + + + +L L + ++ +Q LSI N Sbjct: 264 FVANLMDVIDKGVGRLVDADMNEESTRLKALQTQQQLG------IQSLSIAN 309 >gi|28900129|ref|NP_799784.1| flagellar hook-associated protein FlgL [Vibrio parahaemolyticus RIMD 2210633] gi|153837074|ref|ZP_01989741.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus AQ3810] gi|260365779|ref|ZP_05778275.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus K5030] gi|260880701|ref|ZP_05893056.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus AN-5034] gi|260897693|ref|ZP_05906189.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus Peru-466] gi|260899396|ref|ZP_05907791.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus AQ4037] gi|28808412|dbj|BAC61617.1| putative flagellar hook-associated protein [Vibrio parahaemolyticus RIMD 2210633] gi|149749662|gb|EDM60407.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus AQ3810] gi|308086236|gb|EFO35931.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus Peru-466] gi|308091768|gb|EFO41463.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus AN-5034] gi|308109256|gb|EFO46796.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus AQ4037] gi|308115030|gb|EFO52570.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus K5030] Length = 299 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 116/355 (32%), Gaps = 65/355 (18%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVT----GQSSDYGLQLGARVTSILEWEQEKNH 61 IS + + M + + K+ ++M T + SD + +L E+E + Sbjct: 3 ISDNQFSQMMLQSLQSNSAGLGKVLQQMSTRERLTKLSDDPMA----SIKLLNLERENSA 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 IA+ + + + LS+ + HL S+ + ++ M ++ G + L+ Sbjct: 59 IAQYQSNIANLKTTLSSQETHLDSVNESLKSMRDIVLWGANGSLTDQDRSGMITELKSYR 118 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S + N DE G +LFSG + LN ++S + + Sbjct: 119 DSIESSFNAQDEEGHFLFSGTKTDTAALN----------------------KSSGAYVVE 156 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 + +V + A + + E +D+ N+ Sbjct: 157 GNSDVRVVTV--------------------------AKGVTMDSNMTAQEILDIGGGKNV 190 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 + + + EF + L+ + ++ ++ +G N++ Sbjct: 191 -----LNQIDALIAEFEKPSPN---FQAEVDASLNAIDDTMANVLGAMTEIGGRHNNLDL 242 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 +D ++ A +LS + ++ + K+ LS+ + Sbjct: 243 MDGAHSENKLFVDKVSGDLSALDYGEASVRLSNYMAALQATQASYVKINDLSLFD 297 >gi|293395590|ref|ZP_06639873.1| flagellar hook-associated protein 3 [Serratia odorifera DSM 4582] gi|291421909|gb|EFE95155.1| flagellar hook-associated protein 3 [Serratia odorifera DSM 4582] Length = 321 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 119/350 (34%), Gaps = 38/350 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS ++++ + +K +++ +G+ + + Q + + Sbjct: 3 MSTSMMYQQNMSGLTDNQSLWMKSAQQLSSGKKVLTPSDDPLAASQAIMVSQAQAENGQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + +S + LS++ ++DM +V +G +N A L+ + + Sbjct: 63 ALARTFARQSVSMEETVLSNVTSGIKDMKALIVNAGDGTLSDNDRASLATQLQGMKDQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN TD G+Y+F+G + + P Q + + + + Sbjct: 123 SQANSTDGNGRYMFAGFKNDQPPF-------------VQQADGSIRYQGGSTPIEQKVDA 169 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 +M D I + + + S + ID + ++ Sbjct: 170 NRTMTVGHTGDAI---FMTLTSNPKPEPDGSAPVANVFDS-------IDTALEALKTPLQ 219 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + T +V K + + ++ RA LG ++ + Sbjct: 220 ------------GADDATREKVSVALDKANRGLDNSYNNVLSVRAELG-TQLQEMDTLDS 266 Query: 305 LQNKNNIIDT-YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++ + +S + V+ A + ++ SY + +Q +S+ Sbjct: 267 IGKDRDMTNQAQLSALVDVDMVEAISSYFMQQAALQASYKTFSDMQGMSL 316 >gi|11136620|gb|AAG31287.1|AF317649_2 flagellar hook-associated protein 3 [Rhodobacter sphaeroides] Length = 409 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 34/300 (11%), Positives = 79/300 (26%), Gaps = 27/300 (9%) Query: 71 LVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANM 130 + R L + V + D + LR + Sbjct: 123 ALANRKDAMGQGLFAGYAAGPAFVKEGDTVRFAGNDGQPVAQLSETLRVA---------T 173 Query: 131 TDEGQYLFSGINSSEKP-------------LNGYFTKDSLAKKSFDQMLQGFLEENSKSL 177 + G +F + + P L+ S + + D + + Sbjct: 174 SLGGAEVFMAVPTEAGPRSVFELADDLVATLSVPLAHSSPQRTAEDTARLSLAAPPAPAT 233 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSAN 237 + + ++ + + + + + + I VS Sbjct: 234 VRFTLTGPGG--SVEIEQRLPGSALAAINAASPQTGVTATEEPDGTLVLGAVGRITVSDM 291 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 RD++ + + +S + EQRA G + Sbjct: 292 SRSDDPRDVLATFTSADDKGGWIMPARFDAASLTDAFDA---AVSHMAEQRARAGALAAS 348 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + ++ + I T I ++ A +L L+ E + K+ S+ +YL Sbjct: 349 VDTQADAIRTRQTRIATAIGGLEDLDVAEAVTRLQQLLLTQEAAQQTYVKIANRSLFDYL 408 >gi|330875991|gb|EGH10140.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967098|gb|EGH67358.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. actinidiae str. M302091] Length = 530 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +E N + + +K EE+ +G + +L+ Q+ + + + Sbjct: 3 ISTTQFYESTNTNYQRTYSNVLKTSEEVSSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + S+ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQAAREVVVSAGNGAYTDSDRLAKAAELKQYQSQIL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+F+G SS P Sbjct: 123 GLMNSQDANGQYIFAGSKSSAPP 145 >gi|167626162|ref|YP_001676456.1| flagellar hook-associated protein 3 [Shewanella halifaxensis HAW-EB4] gi|167356184|gb|ABZ78797.1| flagellar hook-associated protein 3 [Shewanella halifaxensis HAW-EB4] Length = 305 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 80/239 (33%), Gaps = 12/239 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +S +++ + D KL+E M TG S ++ E++ + Sbjct: 3 VSMLNLYSNNLQSLQNSTFDIAKLNEMMSTGSSILRPSDDPIGAVKVIGNERDMAATNQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + ++ S S+ ++SSM ++ M V G A + + E+F Sbjct: 63 IKNTESLSTSFSRSETYMSSMVELQGRMREITVSANNGSLSPEDRAAYAAEMNELLEAFA 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL-----NGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 N D G YLFSG + P+ Y + + ++ NS + Sbjct: 123 DTLNAKDESGNYLFSGNKTDTPPIGKDADGNYVYQGDTNTREVQTSGSSWMTANSTAADF 182 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 + + Q DFI LED +S A + + + ++ Sbjct: 183 IFSNGSTDI-LNQTKDFIAALEDPTLAPGDPV--FSQA---ATDMQTSLDDTLTSISSA 235 >gi|227328345|ref|ZP_03832369.1| flagellar hook-associated protein FlgL [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 317 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 116/349 (33%), Gaps = 39/349 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS ++++ K E++ +G+ S + Q ++ ++ Sbjct: 3 LSTSMMYQQNMQGIINGQATWQKTGEQLSSGKRVVNPSDDPIAAASAIMLGQAQSENSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + +S ++ LS + + ++ D+++ + A LR + Sbjct: 63 TLARTFAKQSMSLEESILSKSTNTISSALTEVIKGGGVLNDDDRKSVAAA-LRGMKAELL 121 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G Y+FSG + + P F + G + ++ + Sbjct: 122 NMANSTDGNGNYIFSGYETDKVP--------------FVEGAAGIEYKGGYQAISQRVDA 167 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 M + + + + D + S SD E +D++ + Sbjct: 168 ARDMTVSHVGS---TVFNGVTGDAKKEPDGSIQSD--------LFETLDIAIKALETPL- 215 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + T + + + I RA LGI I+ Sbjct: 216 -----------DGANDTTKANVAAALETANRGLNNSFNNISAVRAELGIQLNEIDNLDAV 264 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++++ T +S+ + + A + + ++ SY +Q +S+ Sbjct: 265 GKDRDVANKTALSQLQDTDWYEAISSYIMQQSSLQASYTAFQNMQGMSL 313 >gi|291558292|emb|CBL35409.1| Flagellin and related hook-associated proteins [Eubacterium siraeum V10Sc8a] Length = 331 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 37/351 (10%), Positives = 102/351 (29%), Gaps = 25/351 (7%) Query: 8 TSSIFERMNILTKELNKDSVKLHE-EMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 T S+ R + + E ++ + + + + L + ++ + L Sbjct: 4 TQSMTNRRYMSQLNAALERKNASERKINSKKRYNRASEDPISAAKALRTRKAISNTNDYL 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + + + + L ++ I+ +++ + G + I A + + V Sbjct: 64 ANLETAEQIYNGADSVLMNVNDILDNIIEKVTYAANGTQHDEDEEILAQTVETFADEIVR 123 Query: 127 FANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS 186 N + +F G+N+ + ++ KK+ + + Sbjct: 124 LFNTDIAERRIFGGVNNDT---TVFKIENVGGKKTITYNGVDINSIDDPDKFPYSESSFT 180 Query: 187 SMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI 246 + + D D S ++ A +I D + N Sbjct: 181 DIGTGMVIDPATGRVDPQSALP---VTFNGA-------KITGCGKDDEGDSKN------- 223 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 +I + + + ++ + + A +G ++ I L Sbjct: 224 ----IIQITLDAAQAVREGDKIKAMDYIDKLRAAQTSVSVAHADIGNKQEYIEYNTNRLT 279 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 N + + G + TL +S + + + +SI ++ Sbjct: 280 NNMETLLEQQNNLEGTDMGAETTNWKTLEAIYNVSLQLASSVIPMSIFQFI 330 >gi|327398476|ref|YP_004339345.1| flagellin domain-containing protein [Hippea maritima DSM 10411] gi|327181105|gb|AEA33286.1| flagellin domain protein [Hippea maritima DSM 10411] Length = 900 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 42/129 (32%), Gaps = 3/129 (2%) Query: 60 NHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 ++ +N+ + + + K +V L N ++D Sbjct: 61 QYVTNINSANAYLDAEDTALSNADDLLHKAGTLLVDGANSLNNDLASRTAIAENLDSIKD 120 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 + AN +G+YLFSG + KP+ + + + D ++ ++ Sbjct: 121 EL---IDSANTIFQGKYLFSGTKTDTKPIQTIQNEATTINITKDTTIKDIKIAADENFSD 177 Query: 180 GQHLEVSSM 188 L+ + Sbjct: 178 INQLDSGNY 186 >gi|56460245|ref|YP_155526.1| flagellin [Idiomarina loihiensis L2TR] gi|56179255|gb|AAV81977.1| Flagellin [Idiomarina loihiensis L2TR] Length = 404 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 110/361 (30%), Gaps = 52/361 (14%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 + +L ++ + ++ + L ++ L+S+ +Q V G D Sbjct: 45 GNSQVLALNEKIGQNEQFERNSVTLENNLRREESVLNSITDAIQKARTLAVQAGNGSYDQ 104 Query: 108 NKFPINAGMLRDSYESFVTFANMTD-EGQYLFSGINSSEKPL------NGYFTKDSLAKK 160 A LRD S N D G+Y+F+G + KP+ Y ++ Sbjct: 105 TNRKAIAAELRDIESSIFDLTNAQDESGEYIFAGYQNRTKPMEFDDATQSYQYVGDQGQR 164 Query: 161 SFDQMLQGFLEENSKSL-------------LAGQHLEVSSMNAQQMTDFIKQLEDKFS-- 205 + +L N L G + + + I E + + Sbjct: 165 TIQLSPTLYLPANDPGNKAFSNVSKRVDFELTGGNDYIEKVEVTDRNTLIADTEARIAAG 224 Query: 206 DDEYWANNWSNAS--------DHNIKYRIKDTEGI------------------DVSANVN 239 D + N++ + + I D + S ++ Sbjct: 225 DPTNFTVNFTGPDTYEIDDGVNPVVAGTITDGKVEYNGMSLELDKDNMPAAGDSFSYSIG 284 Query: 240 MRGIRDIMFVAVIGTEFLSKNL--TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 R+++ + L ++ + G L + + + +A +G + N Sbjct: 285 EPVSRNLLTQLGDLADVLEESGPESKGFHESEIAFALDDFNTVIGDLTDTQASVG-ARLN 343 Query: 298 INEERVFLQNKNNIIDTYI-SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 + + I++ S V+ A L + + T++ +LS+ +Y Sbjct: 344 VMDNAKLSNADIEIVNKKARSDISDVDYSEAMTDLVKNETIYSAAQQVFTRISRLSLFDY 403 Query: 357 L 357 + Sbjct: 404 I 404 >gi|217972605|ref|YP_002357356.1| flagellar hook-associated protein FlgL [Shewanella baltica OS223] gi|217497740|gb|ACK45933.1| flagellar hook-associated protein 3 [Shewanella baltica OS223] Length = 403 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 77/186 (41%), Gaps = 1/186 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +S++ +F + + + K+ +++ +G+ + I Q+ + + Sbjct: 3 LSSAQLFNQSITSVLQKQTATSKILDQLSSGKKVNTAGDDPVASQGIDNLNQKNALVDQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T RL+ +++ L S + + + ++ + G + + A ++ S E + Sbjct: 63 MKNIDYATNRLAVTESKLGSAEDLTGSIREQVMRAINGTLSGTERQMIADEMKGSMEELL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN D G Y+FSG ++ ++P + S D ++ L + ++ + Sbjct: 123 SIANSKDESGNYMFSGFSTDKEPFAFDNSTPPKIVYSGDSGVRNSLVQTGVAMGTNIPGD 182 Query: 185 VSSMNA 190 + M A Sbjct: 183 SAFMKA 188 >gi|315125991|ref|YP_004067994.1| lateral flagellar hook-associated protein, LfgL [Pseudoalteromonas sp. SM9913] gi|315014505|gb|ADT67843.1| lateral flagellar hook-associated protein, LfgL [Pseudoalteromonas sp. SM9913] Length = 298 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 54/164 (32%), Gaps = 2/164 (1%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 I+ E + + + V L + L+ + + + + +G Sbjct: 45 GTVMIMNLGSEIKSLEQYKTNMDAVNFSLGQQEVQLTGIVNQIYSLQSLITTAADGSMGE 104 Query: 108 NKFPINAGMLRDSYESFVTFAN-MTDEGQYLFSGINSSEKPLN-GYFTKDSLAKKSFDQM 165 + + ++ + V N +GQY FSG + EKP A + Sbjct: 105 AEIKALGQEMSVAFPAIVDLLNATDSDGQYYFSGSKTDEKPFQIDATGNYVYAGDDIVRE 164 Query: 166 LQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEY 209 + + + K+ + G L+ + M D++ + + + Sbjct: 165 VAVSDDSSVKNNIVGNDLDPGAGFLNAMQDYLVDVNNPPAGGVG 208 >gi|327441343|dbj|BAK17708.1| flagellin [Solibacillus silvestris StLB046] Length = 295 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/161 (11%), Positives = 48/161 (29%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ S + M KL E++ +G+ + + + + + I + Sbjct: 3 ITQSMLSSNMLRNLNTSYGKMSKLQEQINSGKIINRPSDDPVVAVKGMGYRVDLDKIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + +S L + +Q + + + + + Sbjct: 63 QRNMNTAHNWIDSSDEALDQVGNALQRVQELVTQAANDSNTSEDRQKIQVEIEQIQQQMR 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQML 166 AN Y+FSG N+S + ++ + Sbjct: 123 DLANTKVGENYIFSGTNTSSPLYPDSTSNIMSNGTGLNKAV 163 Score = 36.6 bits (83), Expect = 5.9, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 35/74 (47%) Query: 284 IIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYM 343 ++EQRA++G + L I +SK+ + A +++T + + S Sbjct: 221 VLEQRAIIGARQNRAELMGNRLSISEVNITKQLSKNEDTDYAKAITEMTTAESIHQASLS 280 Query: 344 ITTKLQKLSILNYL 357 + K+ + ++++++ Sbjct: 281 VGAKIIQQTLVDFI 294 >gi|329928724|ref|ZP_08282573.1| flagellar hook-associated protein 3 [Paenibacillus sp. HGF5] gi|328937505|gb|EGG33923.1| flagellar hook-associated protein 3 [Paenibacillus sp. HGF5] Length = 297 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 103/333 (30%), Gaps = 60/333 (18%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 K E+M+T + + V S L++ + + + L ++ Sbjct: 23 LDKYQEQMMTQRRINRPSDDPVGVASALQYRGQITATTQFEQNAEDADSWLKYGDTVMTE 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 + +I+Q + V + A + ++ V+ N +G+Y+F+G + E Sbjct: 83 VTQIIQKLSELAVQGGTDTVPADARENIAAEVDQLFQQLVSLGNSQFKGKYIFNGERTDE 142 Query: 146 KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFS 205 +P F ++ +++ A + EV +T + L +K Sbjct: 143 RP---------------------FPDDPTQTAYALDNGEVRYQVGAGITVSVNTLGEKVF 181 Query: 206 DDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGA 265 D + + F L D Sbjct: 182 G-----------------------------------AYGDASGIFAVVDNFKKALLADDT 206 Query: 266 RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL-QNKNNIIDTYISKSIGVEQ 324 + + ++Q+ L I +A +G + + L N +D SK + Sbjct: 207 --AGIQSAIPSLQKNLETTITSQAEMGGKQNRLEFTLNRLGDLNINYMDLQ-SKVEDADI 263 Query: 325 HTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L T + + S ++ + S+L++L Sbjct: 264 SKVIIDLKTSESVYQASLDTMARIIRPSLLDFL 296 >gi|195953200|ref|YP_002121490.1| hypothetical protein HY04AAS1_0825 [Hydrogenobaculum sp. Y04AAS1] gi|195932812|gb|ACG57512.1| hypothetical protein HY04AAS1_0825 [Hydrogenobaculum sp. Y04AAS1] Length = 597 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 61/166 (36%), Gaps = 3/166 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTG-QSSDYGLQLGARVTSILEWEQEKNHIAE 64 IS S++ + + EE TG + + G G ++ ++E ++ Sbjct: 5 ISDLSLYNFYKSQDSVVLNNLQDTIEEASTGYKLLNIGQNPG-DTQQVINLKKEIVLLST 63 Query: 65 RLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKT-DNNKFPINAGMLRDSYES 123 + + L+T+ + L ++ +Q + +V T ++ + + Sbjct: 64 YSQNAFSASNVLTTTTSVLGNLYDYLQTVNTDVVAAANEATYNSTQLINMGQSIYSILNL 123 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGF 169 ++ AN YLF G + S +P F+ + + Q+ + Sbjct: 124 TLSKANEKFGDNYLFGGSSLSIQPFTADFSYQASTTDFYTQISNSY 169 >gi|49205099|dbj|BAC75963.2| putative flagellar hook-associated protein FlgL [Pseudomonas syringae pv. tabaci] Length = 530 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +E N + + +K EE+ +G + +L+ Q+ + + + Sbjct: 3 ISTTQFYESTNTNYQRTYSNVLKTSEEVSSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + S+ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQTAREVIVSAGNGAYTDSDRLAKAAELKQYQSQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+F+G SS P Sbjct: 123 GLMNSQDSNGQYIFAGSMSSAPP 145 >gi|283833623|ref|ZP_06353364.1| flagellar hook-associated protein 3 [Citrobacter youngae ATCC 29220] gi|291071306|gb|EFE09415.1| flagellar hook-associated protein 3 [Citrobacter youngae ATCC 29220] Length = 317 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 116/351 (33%), Gaps = 44/351 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++++ + +K E+M TG+ + + Q + ++ Sbjct: 3 ISTQMMYQQNMRGITNSQAEWMKFGEQMSTGKRVINPSDDPIAASQAVVLSQAQAQNSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+++S + L+ + +Q +V G ++ A L+ + + Sbjct: 63 TLARTFATQKVSLEENVLNQVTTAIQAAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F G + P A Sbjct: 123 NLANSTDGNGRYIFGGYKTESAPFA----------------------------QADGSYN 154 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDT--EGIDVSANVNMRG 242 + N Q D + + + D+ +A+ SNA + + +D + Sbjct: 155 GGTTNVTQQVDASRTMVIGHTGDKIFASLTSNAVPEPPGSTQEKNLFKMLDSAI------ 208 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 A + T ++ K ++ L+ ++ RA LG ++ Sbjct: 209 -------AELNTPIAGDDVAKDKAAAAIDKTSRGLKNSLNNVLSVRAELGTQLSELSSLD 261 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + A + ++ SY T +Q +S+ Sbjct: 262 SLGADRALGQTQQMSNLVDVDWNAAISSYVMQQAALQASYKTFTDMQGMSL 312 >gi|308071105|ref|YP_003872710.1| flagellin [Paenibacillus polymyxa E681] gi|305860384|gb|ADM72172.1| Flagellin [Paenibacillus polymyxa E681] Length = 302 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/351 (11%), Positives = 104/351 (29%), Gaps = 56/351 (15%) Query: 8 TSSIFERMNILTKELNKD-SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 TS + + N + K+ ++ TG+ + VT L + E + Sbjct: 6 TSGMTNMQLLSNLNRNNNNMGKMENQISTGRKLNKPSDDPVGVTYALRYRAELASNEQYK 65 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 ++ L + + +++ + V + + + Sbjct: 66 TNSDAAVSWLDFTDTTMQQAGDVMKRLKELTVQASSETLPQSGLDSIKLEVDQLKGQMMN 125 Query: 127 FANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS 186 N G+Y+F+G N + P T S + + DQ + + + Sbjct: 126 IGNSQLRGKYVFNGQNYDQAPYQLSATVTSYDQINPDQGAVSYAVGDQDAFRV------- 178 Query: 187 SMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI 246 + + ++ F + ++ SN + I ++ E Sbjct: 179 NTSGSDFFGKSTDPDNVFKVIDALSSALSNGNSTVISSQLSSIE---------------- 222 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 KM +++ + +G + + L+ Sbjct: 223 ---------------------SRFTKMQTSL-----------SEVGARTNRVELIQSRLE 250 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +N + T +K+ + + Q ++ E + + K+ + S+++++ Sbjct: 251 ERNLNLTTLQAKTEDADVASLMIQATSAQTIYEAALKSSAKIMQPSLMDFM 301 >gi|332558501|ref|ZP_08412823.1| flagellar hook-associated protein 3 [Rhodobacter sphaeroides WS8N] gi|332276213|gb|EGJ21528.1| flagellar hook-associated protein 3 [Rhodobacter sphaeroides WS8N] Length = 409 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 34/300 (11%), Positives = 79/300 (26%), Gaps = 27/300 (9%) Query: 71 LVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANM 130 + R L + V + D + LR + Sbjct: 123 ALANRKDAMGQGLFAGYAAGPAFVKEGDTVRFAGNDGQPVAQLSETLRVA---------T 173 Query: 131 TDEGQYLFSGINSSEKP-------------LNGYFTKDSLAKKSFDQMLQGFLEENSKSL 177 + G +F + + P L+ S + + D + + Sbjct: 174 SLGGAEVFMAVPTEAGPRSVFELADDLVATLSVPLAHSSPQRSAEDTARLSLAAPPAPAT 233 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSAN 237 + + ++ + + + + + + I VS Sbjct: 234 VRFTLTGPGG--SVEIEQRLPGSALAAINAASPQTGVTATEEPDGTLVLGAVGRITVSDM 291 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 RD++ + + +S + EQRA G + Sbjct: 292 SRSDDPRDVLATFTSADDKGGWIMPARFDAASLTDAFDA---AVSHMAEQRARAGALAAS 348 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + ++ + I T I ++ A +L L+ E + K+ S+ +YL Sbjct: 349 VDTQADAIRTRQTRIATAIGGLEDLDVAEAVTRLQQLLLTQEAAQQTYVKIANRSLFDYL 408 >gi|302185575|ref|ZP_07262248.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. syringae 642] Length = 530 Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +E N + + K EE+ +G + + +L+ Q+ + + + Sbjct: 3 ISTTQFYEATNANYQRNYSNLNKTSEEVSSGIKLNTASDDPVGASRVLQLTQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + ++ L+S+ +Q +V G ++ A L+ + Sbjct: 63 EANIGTINTNVVNTETALTSIVDTMQAAREEIVSASNGALTDSDRLAKAAALKQYQSQIL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+F+G +S P Sbjct: 123 GLMNSQDPNGQYIFAGSKASTPP 145 >gi|295401180|ref|ZP_06811153.1| flagellar hook-associated protein 3 [Geobacillus thermoglucosidasius C56-YS93] gi|294976773|gb|EFG52378.1| flagellar hook-associated protein 3 [Geobacillus thermoglucosidasius C56-YS93] Length = 304 Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 40/358 (11%), Positives = 102/358 (28%), Gaps = 63/358 (17%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSS-----DYGLQLGARVTSILEWEQEKN 60 ++ + M + K E++VTG+ D + + + + ++ Sbjct: 3 VTQFMLANNMLRNLSNSYERLGKYQEQLVTGKKISRPSDDPVVAM-----KGIAYREDLA 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + V + ++ L + +Q + +V A + Sbjct: 58 RVKQYQRNIGEVHNWIDSADDALDKVGLALQRVQELVVQASTDTATPEDRKKIADEIEQI 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + V AN G+Y+F+G ++ GY + + E + Sbjct: 118 QKHIVDVANTKVGGKYIFNGADTKNPLFIGYPDGMGGLGLNPNANTSDVEIEVFDGIKLD 177 Query: 181 QHLEVSSMNAQQM-TDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 ++ + A + D I +L +K +D Sbjct: 178 VNINGKELFAGTIGQDGIVRLLEKIKND-------------------------------- 205 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 +RD G + A+ S + + + Sbjct: 206 ---LRD---GTKTGDDIDGYLGKIEAQQDALLAARSELGA--------------KQNRVE 245 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 L + I +S + +E L T + ++ + ++ + +++++L Sbjct: 246 MMENRLSTQEVIATKLMSNNEDIEYEKTITDLITQESVHRVALSVGARIIQPTLVDFL 303 >gi|119952980|ref|YP_945189.1| flagellar hook-associated protein FlgL [Borrelia turicatae 91E135] gi|119861751|gb|AAX17519.1| flagellar hook-associated protein 3 [Borrelia turicatae 91E135] Length = 424 Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 48/379 (12%), Positives = 117/379 (30%), Gaps = 70/379 (18%) Query: 47 ARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTD 106 VT + + + + + + + +L + +L S+ I+ V G Sbjct: 47 TGVTHAIRLDSDIFKLNTYVKNINSAKGKLRYMEGYLQSLANILTRAKEITVQGASGTYK 106 Query: 107 NNKFPINAGMLRDSYESFVTFANM-TDEGQYLFSGINSSEKPLN-------GYFTKDSLA 158 + I A + E + AN+ +G +F+G + T+D Sbjct: 107 TDDKKIIAKEINAILEDVLAIANVKGADGYSIFAGTKIDNEAFKVIRENRINKLTQDKAE 166 Query: 159 KKSFDQMLQGFLEENSKSLLAGQHLEVS----------------------SMNAQQMTDF 196 + G E + + G ++ + + + + Sbjct: 167 TQIVRIDYNGNQAEQTTEIYNGIYIPTNYPGSEIFFSHNHYITSSKNVNGFIVKENTKIY 226 Query: 197 IKQLEDKFSDDEYWAN-----NWSNASDHNIKYRIKDTEGIDVSAN-------------- 237 I +E + + A+ N S+A RI ++ I + Sbjct: 227 IDNIEIALTAGDTAADIIAKINESSAPVEATLDRILNSMVIQTTIPHQIWITEEEGSTVL 286 Query: 238 -------------------VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQ 278 N +R+ + L NL + ++ + L+ + Sbjct: 287 KELGILTQNNETKEPPYNIANNTEVRNRTIFDSLIE--LRDNLEENREEIIGSRGLAEID 344 Query: 279 QGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKI 338 L+ I A LG E ++ + + + + K ++ A +L+ Sbjct: 345 ASLNKIFATLADLGTKENRLDRSYERISKEIMDMKDDMVKYTDLDVTKAITELNMTSLAY 404 Query: 339 EMSYMITTKLQKLSILNYL 357 ++S ++ ++ + ++L++L Sbjct: 405 QVSLGVSARIMQTTLLDFL 423 >gi|262173361|ref|ZP_06041038.1| flagellar hook-associated protein FlgL [Vibrio mimicus MB-451] gi|261890719|gb|EEY36706.1| flagellar hook-associated protein FlgL [Vibrio mimicus MB-451] Length = 299 Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 117/355 (32%), Gaps = 65/355 (18%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTG----QSSDYGLQLGARVTSILEWEQEKNH 61 IS + + M + N + ++M TG + SD + +L+ ++E + Sbjct: 3 ISDTQFSQMMLQSLQTNNAGLGNVMQQMSTGERLTKLSDDPMA----SVKLLKLDREGSA 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + ++V LS + HL S+ + ++ M ++ G + L+ Sbjct: 59 IKQYQDNINMVKTTLSNQEVHLDSVSESLKSMRELVLWGANGTLTDEDRDGMISKLKSLR 118 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 S V+ N D +G YLFSG + LN K + G ++ ++ G Sbjct: 119 GSIVSSFNARDEDGHYLFSGTKTDTAALN---------KTDAGYVFNGNNDKRVVTVAKG 169 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +E S+M A+ + D +N+ +I Sbjct: 170 VTVE-SNMTAKDILDLGGG--------------------NNVLNQID------------- 195 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 V+ EF L + L+ ++ +G N++ Sbjct: 196 ----------VLIKEFEKPGKN---FKAKVDSSLKAIDDSLANVLGALTEIGGRYNNLDL 242 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 +D ++ A +LS + ++ + K+ L++ + Sbjct: 243 MESAHSENKLFVDKVTGDLSKLDYGEASVRLSNFMAALQATQASYVKINDLNLFD 297 >gi|302037636|ref|YP_003797958.1| putative second flagellar hook-filament junction protein FlgL [Candidatus Nitrospira defluvii] gi|300605700|emb|CBK42033.1| putative Second flagellar hook-filament junction protein FlgL [Candidatus Nitrospira defluvii] Length = 296 Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 79/285 (27%), Gaps = 59/285 (20%) Query: 73 TKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD 132 T R++ + L +Q ++ + + T A +R V N Sbjct: 70 TARVNAADQALGQVQNLITRVRELTIQASSDTTSAEGRQSIAKEVRQLQRQLVQLGNTEV 129 Query: 133 EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQ 192 GQ +F G + +P F + ++ + E S+ + Sbjct: 130 AGQAIFGGTKTDVQP---------------------FTITSGDTVAYQGNSETQSIAVGE 168 Query: 193 MTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVI 252 + ++ + + S +RD++ Sbjct: 169 --------------------------NQTVQILVPGSSIFTGSTTNMFDSLRDLLTAL-- 200 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 + + L + + I + + +G + L I Sbjct: 201 ----------ESNNRSGIQAGLGNLDLATAQISDVQGTVGALANRLQVTHDALDTATLTI 250 Query: 313 DTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 IS + + TA QL ++ + TK+ S++NYL Sbjct: 251 TKSISDNQDADLATAITQLRLQEVAVQAASETFTKIFDSSLINYL 295 >gi|157373200|ref|YP_001471800.1| flagellar hook-associated protein 3 [Shewanella sediminis HAW-EB3] gi|157315574|gb|ABV34672.1| flagellar hook-associated protein 3 [Shewanella sediminis HAW-EB3] Length = 305 Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 115/354 (32%), Gaps = 61/354 (17%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +++ + D +L+E M TG+S ++ E++ + Sbjct: 3 VSTQNMYSSNLYNLQNTTSDLARLNEMMSTGKSLLRPSDDPIGSVKVIGSERDMAATNQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 L + ++ ++++LSSM ++ M V G A + + ++ Sbjct: 63 LKNIESLSTSFGRAESNLSSMTELQSRMREITVAANNGSLSAEDRAAYAAEMNELLDALT 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN-----GYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 N D G YLFSG + P++ Y + +++ ++ N + Sbjct: 123 DTINAKDEGGNYLFSGNLTDTPPISIDASGNYIYQGDASQREVQVSSSSWMPANVTAQEF 182 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 + + Q +FI LED + + Sbjct: 183 IFSNGSTDI-LNQTKEFIAMLEDP-------------------------------TLSPG 210 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 ++ ML+T+ L+ I +G + ++ Sbjct: 211 DPAFDNVAES-----------------------MLTTLDDTLTSISSAMTDIGGKQNSLT 247 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + I ++ G++ A A+ + + ++++ ++ +LS+ Sbjct: 248 LIQGSHEEMVLFNKEVIGETEGLDYAQATAEFNVKLTTLKVTQQTFVQVSQLSL 301 >gi|283957136|ref|ZP_06374600.1| flagellin family protein [Campylobacter jejuni subsp. jejuni 1336] gi|283791312|gb|EFC30117.1| flagellin family protein [Campylobacter jejuni subsp. jejuni 1336] Length = 749 Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 5/143 (3%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+S+ M ++ +++ +G + + E E + + Sbjct: 10 TNSVNNSM-----GGQSALYQISQQLASGLKIQNSYEDASIYIDNTRLEYEIKTLEQVKQ 64 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 + + + S L M K+++D + A L ES V Sbjct: 65 ATNSAKEMTQNSMKALQDMVKLLEDFKVKVTQAASDGNSQTSREAIAKELERIKESIVQL 124 Query: 128 ANMTDEGQYLFSGINSSEKPLNG 150 AN + GQYLF+G + KP + Sbjct: 125 ANTSVNGQYLFAGSQVANKPFDS 147 Score = 40.8 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 42/113 (37%) Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 D M AV+ + + RN + L + I + +G I+ Sbjct: 637 DTMIDAVLSGNMRADGNSADPRNTGMQGALERLDHLADHISKLNTTMGAYHNTIDGVNTR 696 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + + S I V+ A L + + S +T + +LS+LNY+ Sbjct: 697 VNFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTTISQLSLLNYM 749 >gi|238762353|ref|ZP_04623324.1| hypothetical protein ykris0001_25950 [Yersinia kristensenii ATCC 33638] gi|238699338|gb|EEP92084.1| hypothetical protein ykris0001_25950 [Yersinia kristensenii ATCC 33638] Length = 294 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 111/341 (32%), Gaps = 65/341 (19%) Query: 25 DSVKLHEEMVTG----QSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQ 80 + KL E++ +G + SD + +++ E K+ +++ + ++ S + Sbjct: 11 EYSKLDEQLTSGKRVNRISDDPVA----SMQLVQLENSKSDVSQYKINVVRLSGNYSVQE 66 Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANM-TDEGQYLFS 139 A L+S+ K + + ++ + + + ++ N EG YLFS Sbjct: 67 ASLNSLDKQLLVVRDKMLAAKNSNHSATESATFGREINLLLDGMMSDLNTKNSEGNYLFS 126 Query: 140 GINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQ 199 G S+ KP+ Y + + + + + N +L L S + + + Sbjct: 127 GTKSNIKPV-EYDSTTQKYTFNGNSERRDAVVGNGITLQENTDLSSSLSTSANDLEILTN 185 Query: 200 LEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSK 259 L+ + ID S Sbjct: 186 LKKL------------------------ANKMIDSSIT---------------------- 199 Query: 260 NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS-K 318 N L+ ++ I LG + + L + I++ + Sbjct: 200 ---PATYNQEISTNLTAIETAAKKIGGMLTELGAKQNRLEH-LSNLHDDVEIVNGNLEKD 255 Query: 319 SIGVEQHT--AHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 G++ A Q + L KI ++ + K+ +LS+ NY+ Sbjct: 256 LAGIDIFQVNAAMQSNFLSTKI--AHSMQAKISQLSLFNYI 294 >gi|224825171|ref|ZP_03698277.1| flagellar hook-associated protein 3 [Lutiella nitroferrum 2002] gi|224602842|gb|EEG09019.1| flagellar hook-associated protein 3 [Lutiella nitroferrum 2002] Length = 304 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 113/353 (32%), Gaps = 53/353 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ISTS +F + + KL E++ T + +LE Q + + Sbjct: 3 ISTSMVFTQGYTGIQGNQYTLNKLQEQLSTQKRVVVPSDDPVASAQMLEVSQSEGRNLQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + V L+ S+ L+S ++ + + G + + +++ + V Sbjct: 63 VKNGDAVESSLAISETSLNSANGLLASLKELAIQAGNGGLATTQLKMIQTDVKERFNQLV 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 ++AN +D G YL+ G P +A S + G + A + + Sbjct: 123 SYANTSDSRGNYLYGGNAIDSPPF--------VADSSLNVTYTGDTGRRDVQISAERQVP 174 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 ++ + + + NAS S +R Sbjct: 175 ITEVGSA---------------------VYGNAS----------------SDTAVFDTVR 197 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 D L ++ + +LS + + +A +G + Sbjct: 198 DFY-------NLLGQDPKPANFSTQLSSILSGLDAAQVNLSTVQASIGSRRSENETLQSV 250 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 Q+ + T +S ++ + + + ++ S + K+ LS+ NYL Sbjct: 251 GQDLDVQYKTRLSNLDDLDLPKTISDFTLAQSALQYSQLTFQKVSGLSLFNYL 303 >gi|57167903|ref|ZP_00367043.1| probable flagellin Cj0887c [Campylobacter coli RM2228] gi|57021025|gb|EAL57689.1| probable flagellin Cj0887c [Campylobacter coli RM2228] Length = 734 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 35/96 (36%) Query: 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114 E E + + + + + S L M K+++D + A Sbjct: 36 LEYELKTLEQVKQATNSAKEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIA 95 Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNG 150 L ES V AN + GQYLF+G + KP + Sbjct: 96 KELERIKESIVQLANTSVNGQYLFAGSQVANKPFDS 131 Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 59/171 (34%), Gaps = 5/171 (2%) Query: 189 NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI-- 246 + + + + + + + N + ++ ID N+ I+D+ Sbjct: 567 SGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSLTID---EPNVDIIKDLDS 623 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 M AV+ + + ++ RN + L + + + +G I Sbjct: 624 MIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNTTMGAYHNTIEGVNTRTS 683 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + S I V+ A L + S +T + +LS+LNY+ Sbjct: 684 FLSVNVQSIKSNVIDVDYGEAMMNLMQTQLAYQASLKASTTISQLSLLNYM 734 >gi|312882652|ref|ZP_07742389.1| flagellar hook-associated protein FlgL [Vibrio caribbenthicus ATCC BAA-2122] gi|309369613|gb|EFP97128.1| flagellar hook-associated protein FlgL [Vibrio caribbenthicus ATCC BAA-2122] Length = 397 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 49/408 (12%), Positives = 120/408 (29%), Gaps = 69/408 (16%) Query: 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQE 58 + + S+ + +++ + ++ +G+ SD L I Q+ Sbjct: 6 ASFHNYQSVQNDLRRTESKVHHN----QAQLASGKKLLKASDEPLA----THYIQNIGQQ 57 Query: 59 KNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLR 118 K + + + L RL + +S+ + V D ++ ++ G ++ Sbjct: 58 KEQLRQYTDAIGLTRNRLEHEEVVISNAESYVDDAKRTVMEMINGALSPEDRLAKQREIK 117 Query: 119 DSYESFVTFANMTDE-GQYLFSGINSSEKPL------------NGYF------------- 152 + +F+ N+ DE G Y+F+G +P + Y Sbjct: 118 EIANNFLNLVNIQDETGNYIFAGTKPKNQPFFRNKDNDVSYAGDDYQRKMRISSSLVVPM 177 Query: 153 -TKDSLAKKSFDQMLQGFLE-----------ENSKSLLAGQHLEVSSMNAQQMTDFI--- 197 SL D + + + ++ +M Sbjct: 178 NDPGSLLFMEIDNPFGDYKPLYNLQIESELLLEKATNSNPNDQSIYNVTFVEMPSGKFGY 237 Query: 198 -----KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVI 252 + + D + + S +K +I + I + Sbjct: 238 QLEKDGAVVQADTFDPSIGIQFGDVSIQ-VKGQITKGDQITLEPRKTYSIFESFRESMEY 296 Query: 253 GTEFLSKNLTDGARNVLTKK---MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKN 309 +S + +T++ + + + + + + L I E ++ + L Sbjct: 297 AEGSVSDGSNTAQLHQVTEEFHNAFVHLNKARTDVGSRLSTLDIQEAQHDDFNMTLAKSK 356 Query: 310 NIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +I ++ A + S +E S K + L++ NY+ Sbjct: 357 SIF-------EDLDYAEAIIEFSENSRALEASQQAFGKTKDLTLFNYI 397 >gi|220913742|ref|YP_002489051.1| flagellar hook-associated protein 3 [Arthrobacter chlorophenolicus A6] gi|219860620|gb|ACL40962.1| flagellar hook-associated protein 3 [Arthrobacter chlorophenolicus A6] Length = 294 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 96/294 (32%), Gaps = 10/294 (3%) Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L QA L+S+Q+ + + +D+ A R ++ Sbjct: 8 QTMAAAAQRNLQAGQAKLASLQEKGATLQN-----ITRPSDDPAALAAALATRGQLQAAD 62 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ--HL 183 ++N +G +N+++ L + + Q G L + +K +A + L Sbjct: 63 QYSNNISDGT---GWLNTADSALGQATNVLNRIRDLMLQASNGSLNQPAKDAIAAEIEGL 119 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + + + + SD A + ++ D + V+ G Sbjct: 120 NKDLLASANTKYLGRNVFAGNSDAAAAFTGQPPAFNGTPVSSVERRVDADRTVRVDADGG 179 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 A + + L V L +I RA +G + + + R Sbjct: 180 AIFGDGAGSVFALVGDVVAAIRAGADPSGRLDAVDDRLKTVISGRAEVGTRQSLLEQARD 239 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +++ S + L +++ +T K+ + S++++L Sbjct: 240 AVAAQKVTLESRRSAIEDADIGQVVLDLKLQETNYQVALAVTAKVLQPSLMDFL 293 >gi|15964425|ref|NP_384778.1| flagellin protein [Sinorhizobium meliloti 1021] gi|307311567|ref|ZP_07591208.1| flagellin domain protein [Sinorhizobium meliloti BL225C] gi|17366554|sp|Q52943|FLAC_RHIME RecName: Full=Flagellin C gi|15073602|emb|CAC45244.1| Flagellin C [Sinorhizobium meliloti 1021] gi|306899584|gb|EFN30213.1| flagellin domain protein [Sinorhizobium meliloti BL225C] Length = 321 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 111/352 (31%), Gaps = 44/352 (12%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T+ + +N + + +G + A + + ++ Sbjct: 2 TSIMTNPAAMAALQTLRAINHNLETTQGRISSGYRVETAADNAAYWSIATTMRSDNAALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T + + ++ ++ ++ LV E D +K L+ S Sbjct: 62 TVHDALGLGAAKVDTFYSAMDTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLNS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A+ FSG N + + A ++ F + A + Sbjct: 122 AAQSAS--------FSGEN--------WLYNGASAALGTKSIVASF------NRSADGSV 159 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 VS++N + + D + + + + + + R Sbjct: 160 TVSTLNYDTAKSVLIDVTDPARG---------------MLTKAVNADALQSTPTGTARNY 204 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 ++ + + M+S V + +S + + A LG I + Sbjct: 205 -YLIDAGAAPAGATEIEIDNATTGAQLGDMISVVDELISQLTDSAATLGAITSRIEMQES 263 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ N ++ID + + + + + +L L + ++ +Q LSI N Sbjct: 264 FVANLMDVIDKGVGRLVDADMNEESTRLKALQTQQQLG------IQSLSIAN 309 >gi|254227990|ref|ZP_04921420.1| flagellar hook-associated protein 3 [Vibrio sp. Ex25] gi|262396028|ref|YP_003287881.1| flagellar hook-associated protein FlgL [Vibrio sp. Ex25] gi|151939486|gb|EDN58314.1| flagellar hook-associated protein 3 [Vibrio sp. Ex25] gi|262339622|gb|ACY53416.1| flagellar hook-associated protein FlgL [Vibrio sp. Ex25] Length = 299 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 58/357 (16%), Positives = 123/357 (34%), Gaps = 65/357 (18%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTG----QSSDYGLQLGARVTSILEWEQEKNH 61 IS + + M + N + ++M TG + SD + +L ++E + Sbjct: 3 ISDNQFSQMMLQSLQGNNAGLGHVLQQMTTGERLTKLSDDPMA----SIKLLNLDRENSA 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 IA+ ++ + V LS+ + HL S+++ + M + G + L+ Sbjct: 59 IAQYQNNIANVKTTLSSQETHLDSVKESLMSMRDIALWGANGSLTDQDRTGMITELKSYR 118 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S + N DE G YLFSG + +N S +++G ++ ++ G Sbjct: 119 DSIESSFNAQDEEGHYLFSGTKTDTPAIN---------SASGSYVIEGNSDKRVVTIAKG 169 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 ++ S+M A+ + D N+ +I + Sbjct: 170 VTMD-SNMTAKDILDLGGG--------------------KNVLDQINN------------ 196 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 + TEF + + LS + L+ ++ +G N++ Sbjct: 197 -----------LITEFENPSPN---FQAEVDASLSAIDDTLASVLGTMTEIGGRHNNLDL 242 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +D ++ A +LS + ++ + K+ LS+ + L Sbjct: 243 VGGAHGENKLFVDKVSGDLSALDYGEASVRLSNYMAALQATQASYVKINDLSLFDRL 299 >gi|307318922|ref|ZP_07598353.1| flagellin domain protein [Sinorhizobium meliloti AK83] gi|306895336|gb|EFN26091.1| flagellin domain protein [Sinorhizobium meliloti AK83] Length = 321 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 111/352 (31%), Gaps = 44/352 (12%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T+ + +N + + +G + A + + ++ Sbjct: 2 TSIMTNPAAMAALQTLRAINHNLETTQGRISSGFRVETAADNAAYWSIATTMRSDNAALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T + + ++ ++ ++ LV E D +K L+ S Sbjct: 62 TVHDALGLGAAKVDTFYSAMDTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLNS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A+ FSG N + + A ++ F + A + Sbjct: 122 AAQSAS--------FSGEN--------WLYNGAAAALGTKSIVASF------NRSADGSV 159 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 VS++N + + D + + + + + + R Sbjct: 160 TVSTLNYDTAKSVLIDVADPARG---------------MLTKAVNADALQSTPTGTARNY 204 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 ++ + + M+S V + +S + + A LG I + Sbjct: 205 -YLIDAGAAPAGATEIEIDNTTTAAQLGDMISVVDELISQLTDSAATLGAITSRIEMQES 263 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ N ++ID + + + + + +L L + ++ +Q LSI N Sbjct: 264 FVANLMDVIDKGVGRLVDADMNEESTRLKALQTQQQLG------IQSLSIAN 309 >gi|146335608|gb|ABQ23407.1| FlgL [Pseudomonas syringae pv. averrhoi] Length = 530 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +E N + + +K EE+ +G + +L+ Q + + + Sbjct: 3 ISTTQFYESTNTNYQRTYSNVLKTSEEVSSGIKLNTASDDPVGAARVLQLAQHNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + S+ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQTAREVIVSAGNGAYTDSDRLAKAAELKQYQSQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+F+G SS P Sbjct: 123 GLMNSQDSNGQYIFAGSKSSAPP 145 >gi|77463645|ref|YP_353149.1| flagellar hook-associated protein 3 FlgL [Rhodobacter sphaeroides 2.4.1] gi|77388063|gb|ABA79248.1| flagellar hook-associated protein 3 FlgL [Rhodobacter sphaeroides 2.4.1] Length = 409 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 34/300 (11%), Positives = 80/300 (26%), Gaps = 27/300 (9%) Query: 71 LVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANM 130 + R L + V + D + LR + Sbjct: 123 ALANRKDAMGQGLFAGYAAGPAFVKEGDAVRFAGNDGQPVAQLSETLRVA---------T 173 Query: 131 TDEGQYLFSGINSSEKPLNGYFTKD-------------SLAKKSFDQMLQGFLEENSKSL 177 + G +F + + P + + D S + + D + + Sbjct: 174 SLGGAEVFMAVPTEAGPRSVFDLADDLVATLSVPLAHSSPQRSAEDTARLSLAAPPAPAT 233 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSAN 237 + + ++ + + + + + + I VS Sbjct: 234 VRFTLTGPGG--SVEIEQRLPGSALAAINAASAQTGVTATEEPDGTLVLGAVGRITVSDM 291 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 RD++ + + +S + EQRA G + Sbjct: 292 SRSDDPRDVLATFTSADDKGGWIMPARFDAASLTDAFDA---AVSHMAEQRARAGAFAAS 348 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + ++ + I T I ++ A +L L+ E + K+ S+ +YL Sbjct: 349 VDTQADAIRTRQTRIATAIGGLEDLDVAEAVTRLQQLLLTQEAAQQTYVKIANRSLFDYL 408 >gi|126462477|ref|YP_001043591.1| flagellar hook-associated protein 3 [Rhodobacter sphaeroides ATCC 17029] gi|126104141|gb|ABN76819.1| flagellar hook-associated protein 3 [Rhodobacter sphaeroides ATCC 17029] Length = 409 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 34/299 (11%), Positives = 81/299 (27%), Gaps = 25/299 (8%) Query: 71 LVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANM 130 + R L + V + D + LR + Sbjct: 123 ALANRKDAMGQGLFAGYAAGPAFVKEGDTVRFAGNDGQPVAQLSETLRVA---------T 173 Query: 131 TDEGQYLFSGINSSEKPLNGYFTKD------------SLAKKSFDQMLQGFLEENSKSLL 178 + G +F + + P + + D S ++S + + Sbjct: 174 SLGGAEVFMAVPTEAGPRSVFDLADDLVATLSVPLAHSSPQRSAEDA-ARLSLAAPPAPA 232 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 + + + ++ + + + + + + I VS Sbjct: 233 TVRFTLTGPVGSVEIEQRLPGSALAAINAASAQTGVTATEEPDGTLVLGAVGRITVSDMS 292 Query: 239 NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 RD++ + + +S + EQRA G ++ Sbjct: 293 RSDDPRDVLATFTSADDKGGWIMPARFDAASLTDAFDA---AVSHMAEQRARAGALAASV 349 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + ++ + I T I ++ A +L L+ E + K+ S+ +YL Sbjct: 350 DTQADAIRTRQTRIATAIGGLEDLDVAEAVTRLQQLLLTQEAAQQTYVKIANRSLFDYL 408 >gi|289548870|ref|YP_003473858.1| flagellar hook-associated protein 3 [Thermocrinis albus DSM 14484] gi|289182487|gb|ADC89731.1| flagellar hook-associated protein 3 [Thermocrinis albus DSM 14484] Length = 388 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 50/400 (12%), Positives = 114/400 (28%), Gaps = 68/400 (17%) Query: 9 SSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHS 68 IF + ++ + E+ TG+ +++ ++E +++ + Sbjct: 6 YFIFSLLKEQEAKVRRQLEDKILEVSTGRKVRSISDEPNVTFNVISLKKEVAQLSQYSKN 65 Query: 69 NSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKT-DNNKFPINAGMLRDSYESFVTF 127 L+ + L M+ +++ +V T + A + + ++ + Sbjct: 66 RLFSDTYLAYTDFTLGKMEDLLKGAYSNVVRAKNSATLTPQELKATADGMYATLKALLDR 125 Query: 128 ANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSS 187 AN ++FSG + +P T D +A Q+ L G+ SS Sbjct: 126 ANDKLGQVFVFSGTDLERRPF-DETTLDYVASPQDFQVWISDSTSIPTVLSGGEVFYTSS 184 Query: 188 MNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM 247 S Y + S S I + T +++S + Sbjct: 185 ---------------TLSKATYLSPTQSFTSSGTITITVGAT-TVNISYGAQNQPQSIEE 228 Query: 248 FVAVIGTEFL--------------------------------SKNLTDGARNVLTKKMLS 275 + + + + L+ G ++ + + Sbjct: 229 LASYMNASYGNLLGALVSQNPDGSYSLLIYSKDPSSKLTLSATGELSVGFQDTNVLQAVK 288 Query: 276 TVQQGLSG------------------IIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 V LS + RA +G + + +N +I+ S Sbjct: 289 RVADKLSSGLYPDESDLFLIERSYSTVSAWRAKVGSVLAVVRNMQDLQENSMDILQARKS 348 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + + E I + L+IL Y+ Sbjct: 349 DLEDADLPQSVLEYTRYRIAYEALMRIVADQKDLTILRYI 388 >gi|294339835|emb|CAZ88198.1| putative flagellin FlgL [Thiomonas sp. 3As] Length = 417 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ISTS + L +++ TG + + + N +A Sbjct: 3 ISTSQFYAASLTGILNQQNTLNTLSQQLSTGSTLVNPSDQPVAAAQNVALTGQINRLAGY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L A L S+ +V V + G + A ++ + Sbjct: 63 AQNGQNAQNSLQLESATLQSVTTLVSQARQLAVQMNNGTVSSQDLQNAAATMQGYVQQLA 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPL 148 +AN D G YLF+G S +P Sbjct: 123 QYANTQDGQGNYLFAGSKSGAQPF 146 >gi|227820868|ref|YP_002824838.1| flagellin protein FlaD [Sinorhizobium fredii NGR234] gi|227339867|gb|ACP24085.1| flagellin protein FlaD [Sinorhizobium fredii NGR234] Length = 320 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 117/353 (33%), Gaps = 47/353 (13%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T++ + +N++ + + +G + A + + ++ Sbjct: 2 TSIMTNAAAMAALQTLRSINRNLDETQSRVSSGYRVETAADNAAYWSIATTMRSDNAALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ A L ++ ++ ++ LV E D K L+ E Sbjct: 62 TVQDALGLGAAKVDTAYAALDTVIDLMSEVKAKLVAAREPGVDKTKIDKELAQLK---EQ 118 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 V+ A FSG N + D+ ++ F + A + Sbjct: 119 LVSAAQSAS-----FSGEN--------WLYNDAATAVGTKSIVASF------NRSADGSV 159 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 V++++ + ++D AS + D + Sbjct: 160 SVTTLDYDTSGSILVDVQD--------------ASRGLLT----MAVDADTLVSAPTGSA 201 Query: 244 RDIMFVAVIGTEFLSK-NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 R+ + ++ L++ + M+S V +S + A LG I + Sbjct: 202 REYYLIDAGSPPAGTEIALSETTTDEELDDMISVVDDLVSQLTNSAATLGAITSRIEMQE 261 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ N ++ID + + + + + +L L + ++ +Q LSI N Sbjct: 262 NFVANLMDVIDKGVGRLVDADMNEESTRLKALQTQQQLG------IQSLSIAN 308 >gi|56421671|ref|YP_148989.1| flagellar hook-associated protein FlgL [Geobacillus kaustophilus HTA426] gi|56381513|dbj|BAD77421.1| flagellar hook-associated protein 3 [Geobacillus kaustophilus HTA426] Length = 297 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 41/352 (11%), Positives = 99/352 (28%), Gaps = 58/352 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ S + M + + ++ TG+ + + + + Sbjct: 3 ITQSMLANNMLKQITRSYEKLDQYQTQLSTGKKITRPSDDPVVAMKGIAYRSNLAEVEQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + S + L + +Q + +V + + A +R E V Sbjct: 63 KRNFSEAYNWVENSDSALDKATQALQRIRELVVQASNDTYEETQRQSIAKEVRQLTEHLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 T AN +Y+F+G ++E P+ D S + + Sbjct: 123 TIANTKVGDKYIFNGAKTTEPPVT--VNPDGTISVSTNSQQLNIELAKGIYIPVNIPPST 180 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + + ++ L + S N Sbjct: 181 AFGAGSGLFSDLQNLAASLENP---------------------------STTGND----- 208 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 T +L K L N+L + + + + + E I Sbjct: 209 -------LTGYLDK-LDSHLTNLLGVRA---------ELGARMNRIELMEDRI------- 244 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ I + +S + V+ L T + + + ++ + +++++L Sbjct: 245 DSQQVIAEKMLSDNEDVDLEKVITDLKTQESVHRAALAVGARVIQPTLVDFL 296 >gi|89072307|ref|ZP_01158886.1| flagellar hook-associated protein [Photobacterium sp. SKA34] gi|89051839|gb|EAR57291.1| flagellar hook-associated protein [Photobacterium sp. SKA34] Length = 299 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 101/307 (32%), Gaps = 57/307 (18%) Query: 52 ILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFP 111 +L ++E + I + + S V LS+ + HL + ++DM L++ G + Sbjct: 49 LLNLDRENSAINQYQDNISNVKTALSSQEVHLMAASDTIKDMRDSLLLASNGALSDADRE 108 Query: 112 INAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFL 170 A L ++F++ N+ DE G YLFSG S + + +G Sbjct: 109 SYANKLVSLRDAFMSSFNVQDEEGNYLFSGTQSDVPAITSQPAGG--------YIFEGNS 160 Query: 171 EENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 ++ ++ G +E + + + + NN N D I T Sbjct: 161 DKRVVTVAKGVTMEANFASQEILDLG--------------GNNILNQIDAAITELQAPTV 206 Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 I+ + L+T+ ++ Sbjct: 207 NINNTLQAT----------------------------------LNTLDTTHDNVLAAVTD 232 Query: 291 LGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 +G N++ + ++ + ++ A +L+ + ++ + K+ Sbjct: 233 IGGRHNNLDLMETSHGDNKLFVEAVTNDLEALDYGEASVRLNNYMAALQATQASYMKIND 292 Query: 351 LSILNYL 357 LS+ N L Sbjct: 293 LSLFNRL 299 >gi|332161329|ref|YP_004297906.1| flagellar hook-associated protein FlgL [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605250|emb|CBY26748.1| flagellar hook-associated protein FlgL [Yersinia enterocolitica subsp. palearctica Y11] gi|325665559|gb|ADZ42203.1| flagellar hook-associated protein FlgL [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 326 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 116/349 (33%), Gaps = 31/349 (8%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS ++++ ++ +++ TG+ + + Q ++ + Sbjct: 3 LSTSMLYQQNMQGVTNAQSLWMQSGQQLSTGKRVVNPSDDPMAASQAVMVSQSQSENNQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + S LS +Q + ++ + ++ A L+ + + Sbjct: 63 TLARSFARQSSSLETTVLSQATSTIQSIQSLIIGAAKDSLSDDDRASMATQLQGLKDQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F G S + P T + D +Q ++ N + Sbjct: 123 NQANSTDGNGRYMFGGFQSDKAPFAVSNT-GEVTYVGGDVAIQQRVDSNRTMTVGHTGSS 181 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V + + N N + I +T ++ Sbjct: 182 V---------------FMALTSNATPEPNDVNGDPVAAESNIFNTI---------DTVLK 217 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + T+ + + +D K + + L+ ++ +A +G + ++ Sbjct: 218 SLKTPLQGATDAVKQQASDE-----MDKGIRGMANSLNNVLSVQAEIGTQLQELDSLDSL 272 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ I +S V+ ++A + ++ SY T +Q LS+ Sbjct: 273 GSDRTLINKQRLSDLQDVDWNSAISSYVMQQAALQASYTTFTNMQGLSL 321 >gi|330961206|gb|EGH61466.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. maculicola str. ES4326] Length = 530 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 58/143 (40%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +E N + + K EE+ +G + + +L+ Q+ + + + Sbjct: 3 ISTTQFYEATNTNYQRNYANLNKTSEEVSSGIKLNTASDDPVGASRVLQLAQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + +++ L+S+ +Q ++ G +++ A L+ + Sbjct: 63 AANIGTINTNVVSTETALTSIIDTMQSAREEIISASNGVNTDSERLTKAESLKQYQGQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+ +G SS P Sbjct: 123 ALMNSKDANGQYILAGSKSSTPP 145 >gi|15964422|ref|NP_384775.1| flagellin A protein [Sinorhizobium meliloti 1021] gi|307311564|ref|ZP_07591205.1| flagellin domain protein [Sinorhizobium meliloti BL225C] gi|17366437|sp|Q03841|FLAA1_RHIME RecName: Full=Flagellin A gi|152224|gb|AAA26279.1| flagellin A [Sinorhizobium meliloti] gi|15073599|emb|CAC45241.1| Flagellin A [Sinorhizobium meliloti 1021] gi|306899581|gb|EFN30210.1| flagellin domain protein [Sinorhizobium meliloti BL225C] Length = 394 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 52/392 (13%), Positives = 117/392 (29%), Gaps = 50/392 (12%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T++ + ++ + +G A + + ++ Sbjct: 2 TSILTNNSAMAALSTLRSISSSMEDTQSRISSGLRVGSASDNAAYWSIATTMRSDNQALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ + + S ++V+++ LV E D K L+D S Sbjct: 62 AVQDALGLGAAKVDTAYSGMESAIEVVKEIKAKLVAATEDGVDKAKIQEEITQLKDQLTS 121 Query: 124 FVTFANMTDEGQY-----LFSG--------------------------INSSE------- 145 A + G+ L G +N+ Sbjct: 122 IAEAA--SFSGENWLQADLSGGPVTKSVVGGFVRDSSGAVSVKKVDYSLNTDTVLFDTTG 179 Query: 146 -KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKF 204 + S A + + G E + L +S D+ Sbjct: 180 NTGILDKVYNVSQASVTLPVNVNGTTSEYTVGAYNVDDLIDASATFD--GDYANVGAGAL 237 Query: 205 SDD-EYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTD 263 + D +W A D + + V+ + ++T Sbjct: 238 AGDYVKVQGSWVKAVDVAATGQEVVYDDGTTKWGVDTTVTGAPATNVAAPASIATIDITI 297 Query: 264 GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE 323 A+ +++ V + L+ + A LG I+ + F+ ++ ID+ + + + + Sbjct: 298 AAQAGNLDALIAGVDEALTDMTSAAASLGSISSRIDLQSDFVNKLSDSIDSGVGRLVDAD 357 Query: 324 QHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + +L L + +++ +Q LSI N Sbjct: 358 MNEESTRLKALQTQQQLA------IQALSIAN 383 >gi|330972422|gb|EGH72488.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. aceris str. M302273PT] Length = 530 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ FE N + + K EE+ +G + +L+ Q+ + + + Sbjct: 3 ISTTQFFESTNTNYQRNYSNLNKTSEEVSSGIKLNTAGDDPVGAARVLQLTQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T++ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ETNIGTINTNAVTTETTLTSIIDTMQAAREQIVSAGSGAFTDSDRLAKASALKQYQSQIL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+FSG +S P Sbjct: 123 GLMNSQDPNGQYIFSGSKASTPP 145 >gi|327480027|gb|AEA83337.1| flagellar hook-associated protein FlgL [Pseudomonas stutzeri DSM 4166] Length = 519 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 59/148 (39%), Gaps = 9/148 (6%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IST F + ++ + E++ TG +D + +L+ +Q++N Sbjct: 3 ISTLQAFNNGVAGLQRNYANATRTQEQISTGNRILTPADDPVA----SVRLLQLDQQQNV 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 +++ + + L+ + L+S+ ++Q + V G A LR+ Sbjct: 59 LSQYNANLTAAKNSLTQEEVTLNSVNTVLQRVRELAVQAGNGGLSAEDRKSIAAELRERE 118 Query: 122 ESFVTFANM-TDEGQYLFSGINSSEKPL 148 + ++ N G+YLFSG +P Sbjct: 119 DELLSLMNTRNARGEYLFSGFQGKTQPF 146 >gi|163783193|ref|ZP_02178187.1| flagellar hook associated protein FlgL [Hydrogenivirga sp. 128-5-R1-1] gi|159881527|gb|EDP75037.1| flagellar hook associated protein FlgL [Hydrogenivirga sp. 128-5-R1-1] Length = 481 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 61/189 (32%), Gaps = 13/189 (6%) Query: 21 ELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRL 76 + K+ + E+ TG+ SD + ++L +++ +++ + L Sbjct: 18 RIRKEIARKTIEIATGKRIHNLSDDPVA----TFNVLSLKKDIAQLSQFSKNRLFSDVNL 73 Query: 77 STSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQY 136 S L M ++ + V + ++ + AN Y Sbjct: 74 SYIDFTLDKMSTKIKYLYTKAVQAKNELNTTDALRAVGVEFGEALSFLLDRANEKVGENY 133 Query: 137 LFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDF 196 +FSG + KP +S + + ++E + + V S N QM Sbjct: 134 IFSGSALTTKPFT-----NSFVYQGSQETFNVQIDETNFVEVFSAGSSVFSANVYQMDTL 188 Query: 197 IKQLEDKFS 205 + F+ Sbjct: 189 FSSPDTAFT 197 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 33/260 (12%), Positives = 84/260 (32%), Gaps = 30/260 (11%) Query: 104 KTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFD 163 N+ + S VT N G+ + + I + P Y + S Sbjct: 246 DNSMNEVARITNYGQYSLNDLVTQINTAFGGENITASIVT--NPDGTYTLRVSD------ 297 Query: 164 QMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIK 223 +S + + + + + + +F+K D + Sbjct: 298 --------GDSPANNFIEDTSGNVLESNNLQNFVKIFNGISPGDVN--AFVHQVPNGQYT 347 Query: 224 YRIKDTEGIDV-SANVNMRGIRDIMFVAVI-----GTEFLSKNLTDGARNVLTKKMLSTV 277 R+ + S + + + + + + LS L ++L + Sbjct: 348 LRLAPEDVSTTLSVSFSGTALGNFSTPNIFQLINEVKDKLSGGLAPDDSDLLA------I 401 Query: 278 QQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINK 337 Q+ ++ +R+ G + +++ +N+ +++ S + VE + + + Sbjct: 402 QRAYDKVVSERSRFGSILSQVKDQQPVQENRMDVLRKQKSDTEEVELSESIMEYTRYRTA 461 Query: 338 IEMSYMITTKLQKLSILNYL 357 E I T+ + ++IL Y+ Sbjct: 462 YEALMRIVTESRDMTILRYI 481 >gi|291280512|ref|YP_003497347.1| hypothetical protein DEFDS_2144 [Deferribacter desulfuricans SSM1] gi|290755214|dbj|BAI81591.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 1168 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 95/247 (38%), Gaps = 30/247 (12%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQS-----SDYGLQLGARVTSILEW 55 M+ T +T I + NI ++ + ++++ G++ SD S + Sbjct: 1 MRVTF-NTLYIKNQNNI--RKSLERMTLANDKVNKGRNLLAPESDP-----VYYASAINI 52 Query: 56 EQEKNHIAERLHS--NSL--VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFP 111 ++ + + + + N+L +T + Q S + K + + L + Sbjct: 53 QRMIDEMDQFKRNADNALTWITNEDNELQNASSLISKAKNEY---ALAGLNDSQNETSRK 109 Query: 112 INAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLE 171 AG +++ +S V+ N G+Y+F+G + KP + + + S D QG Sbjct: 110 ALAGDVKNILDSMVSIGNANYFGRYIFAGYKTDTKPFS--YDDKEIKGVSVDSGSQGVEI 167 Query: 172 ENSKSLLAGQHLEVSSMNAQQMT-----DFIKQLEDKFSDDEYWANNWSNASDHNIKY-R 225 ++ + L+ + D IK + S ++ + + SN+SD + K Sbjct: 168 IKKRTFADLKELDEGNYTVDIQKVNGSADLIKVILYDSSGNKVFID--SNSSDESAKNGN 225 Query: 226 IKDTEGI 232 I TE Sbjct: 226 ITTTEMT 232 >gi|323498413|ref|ZP_08103409.1| flagellar hook-associated protein FlgL [Vibrio sinaloensis DSM 21326] gi|323316486|gb|EGA69501.1| flagellar hook-associated protein FlgL [Vibrio sinaloensis DSM 21326] Length = 397 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 47/401 (11%), Positives = 119/401 (29%), Gaps = 57/401 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G+ SD L I Q+K Sbjct: 5 ISSFHNYQSVQNDLRRQESKVHHNQAQLASGKKLMKASDDPLA----THYIQNIGQQKEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + + L RL + +S+ ++ + ++ ++ G + + Sbjct: 61 LRQYSDAIVLTRNRLEHHEVIISNAEEFADEAKRTVMEMINGALSPEDRFAKRREIEEIS 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL------------NGYF--------------TK 154 +F+ N+ D G Y+F+G +P + Y Sbjct: 121 NNFLNLVNVQDESGNYIFAGTKPKNQPFFRDKDADVVYAGDDYQRKMKISNSLEMPINDP 180 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS-SMNAQQMT----DFIKQLEDKFS---- 205 S D F + + LE + ++N + F+ E K+ Sbjct: 181 GSKLFMEIDNPFGDFSPKYDLKEASELLLERAINLNPDDQSTYKVTFVDMPEGKYGYQLE 240 Query: 206 -DDEYWANNWSNASDH--------NIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF 256 D + + S +K +I + I++ Sbjct: 241 RDGSVVQADTFDPSKGIKYEDVTIQVKGQITKGDAIELEPQRTYSIFETFKEAM----AL 296 Query: 257 LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYI 316 +++D + ++ + + R +G ++ + ++ + Sbjct: 297 SEGSVSDSSNTAQLHQITQEFHAAFIHLNKARTDVGARLSTLDIQEEQHEDFKMTLAKSQ 356 Query: 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S ++ A + + ++ S K + L++ NY+ Sbjct: 357 SNFEDLDYAAAIIEFNENSRALQASQQAFGKTKDLTLFNYI 397 >gi|91201246|emb|CAJ74306.1| similar to flagellar hook-associated protein FlgL [Candidatus Kuenenia stuttgartiensis] Length = 305 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 45/359 (12%), Positives = 117/359 (32%), Gaps = 67/359 (18%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ +S+ + K ++ E++ +G+ + +L ++ +N + + Sbjct: 5 VTQASLSNTTLSNIQLNYKKMQEIQEKLSSGKQINRASDDPVSTRKLLGFKSGENELQQY 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 L + +++ L ++Q I+ + V +G +++ I A + + E+ + Sbjct: 65 LDAIKHARDKINFIFDALENIQDIMVKIQTKTVQAADGTLGDSERGIIASEIDELMETII 124 Query: 126 TFAN-MTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 F+N G+YLFSG + P +S + G + Sbjct: 125 QFSNITDSNGRYLFSGTKTLTAPFR--------------------ATRDSGGEITGVKYD 164 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + I+Y+I VN G + Sbjct: 165 GN--------------------------------NETIQYQIGSN----TFIQVNQPGGK 188 Query: 245 DIMFVAVIGT------EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 M + E + A L++K + + ++ + G + Sbjct: 189 LFMENGIFANLINLRDELKKSDFDTDAF--LSQK--KNFETANNNVLTEITKFGAKVDRL 244 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++N + IS + + + +L N ++ + ++ + S+L+++ Sbjct: 245 AITENRVENSKIALKELISYTEDADLASLITELKNQENVLQAALQTGARIIQPSLLDFI 303 >gi|30248329|ref|NP_840399.1| flagellar hook-associated protein FlgL [Nitrosomonas europaea ATCC 19718] gi|30138215|emb|CAD84223.1| Flagellin, N-terminus [Nitrosomonas europaea ATCC 19718] Length = 299 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS+++++ + +L + + TG+ E Q + + Sbjct: 3 VSTSTLYDQGTRSMLQQQDSLFRLQQHLSTGKRIMTPSDDPIGAARAHELAQSLSLNTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L + L S+ ++Q + V + +++ + A LR ++ + Sbjct: 63 ADNRYRAADSLQQVDSTLGSVSNLIQSVRTMAVAVGNSAFSDSERKMMAVELRGHFDELL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPL 148 AN DE G YLFSG + +P Sbjct: 123 GLANTKDEQGNYLFSGFKGNTRPF 146 >gi|154250317|ref|YP_001411142.1| flagellar hook-associated protein 3 [Fervidobacterium nodosum Rt17-B1] gi|154154253|gb|ABS61485.1| flagellar hook-associated protein 3 [Fervidobacterium nodosum Rt17-B1] Length = 297 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 51/145 (35%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + I ER ++ ++H+++ +G+ Y T + + Sbjct: 3 ITNNMINERSLFNIQQSLYRIARMHDKLSSGKEVQYPSDDAVIATRASNISSRLRELEQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + + L + + + +V G ++ A L+ E + Sbjct: 63 KRNVDHINNFVQSYDTTLQELSDLYHRVRELMVRGANGTNTVDERNAIAAELKAIKEHLI 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNG 150 +N +++F G S KP++ Sbjct: 123 EVSNTRVGDEFIFGGARSELKPVDE 147 >gi|310644333|ref|YP_003949092.1| flagellin-like protein [Paenibacillus polymyxa SC2] gi|309249284|gb|ADO58851.1| Flagellin-like protein [Paenibacillus polymyxa SC2] Length = 306 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/337 (10%), Positives = 96/337 (28%), Gaps = 49/337 (14%) Query: 21 ELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQ 80 ++ +M TG+ + +T L + E + + + L + Sbjct: 18 RNSERMNNTQNQMSTGRKLNKPSDDPVGITYSLRYRSELSSNEQYQRNVDSAVSWLDFND 77 Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSG 140 + +I+Q + V G + + E + N G+Y+F+G Sbjct: 78 TVMDQAGQIMQRVRELTVQASTGTNPQSALDSINKEIGQLKEQMIDVVNSQLNGKYIFNG 137 Query: 141 INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQL 200 +KP + A + D + ++ ++ V+ Sbjct: 138 QTYDKKP----YDLPLNADNTHDTSGAASIATDTGNVNFIVGENVA-------------- 179 Query: 201 EDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKN 260 + + E + SA+ + + I + S Sbjct: 180 ---------------------LPINVTGNEVVGTSADADN--------LFTIFNQLSSSL 210 Query: 261 LTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 + + L+ + + +++ ++ +G + + L + + SK+ Sbjct: 211 ASGDIKTS--GDQLANIDSRMDKMLKVQSEMGAKSNRVELMQNRLSDLEVNLTDLQSKTE 268 Query: 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + N S K+ S++++L Sbjct: 269 DADYAELLMNSKIQENIYNASLSAGAKIISASLVDFL 305 >gi|116250493|ref|YP_766331.1| flagellin C [Rhizobium leguminosarum bv. viciae 3841] gi|115255141|emb|CAK06215.1| flagellin [Rhizobium leguminosarum bv. viciae 3841] Length = 320 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 36/334 (10%), Positives = 101/334 (30%), Gaps = 38/334 (11%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 TS+ + + +NK++ + +++ +G + + + + ++ Sbjct: 6 TSAAAVNALAVLRSINKEASQTQQQVSSGYRIETAADDASYWSVATVMRSDSTNLGTVGD 65 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 + L ++ + ++S ++ ++ LV E TD +K ++ ++ V Sbjct: 66 ALGLGAAKVDATYTAMNSAIDLIGEIRAKLVSAREPGTDKDKINAEISEYKEQLQTIVES 125 Query: 128 ANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSS 187 + G+ + A ++ GF+ + A SS Sbjct: 126 --TSFAGE--------------NWLLNGDTAAPPTWSIISGFVRAPTGEYQAQTIDFPSS 169 Query: 188 MNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM 247 D AS + + + R + Sbjct: 170 QT-------------ILIDKNN-------ASGGLLTKSVDANAINNSG--ATSRNYYLLN 207 Query: 248 FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQN 307 + + + + ML LS + A +G+ + I+++ + + Sbjct: 208 ANSTTPATGTEIAIDNNTTDAQLTDMLDVTDALLSSLTTTAASIGVMKTRIDDQIDYTAD 267 Query: 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 + ID + + + A + + + +M+ Sbjct: 268 LADSIDKSVGALVDTDMDEASIRQKAIETQKQMA 301 >gi|294140192|ref|YP_003556170.1| flagellar hook-associated protein FlgL [Shewanella violacea DSS12] gi|293326661|dbj|BAJ01392.1| flagellar hook-associated protein FlgL [Shewanella violacea DSS12] Length = 404 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 76/203 (37%), Gaps = 2/203 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +F + + + K+ +++ +G+ + I Q+ + + Sbjct: 3 ISTAQMFNQSITSVLDKQSATSKVLDQLSSGKRVNTAGDDPVAAIGIDNLYQQNALVNQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T L+ +++ L S + +V + ++ + G + A +R S E + Sbjct: 63 IKNIDYATGHLAVAESKLGSAESLVSSIKDQVLRGVNGSLTDIDRVTIANEMRSSLEELL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN D G+Y+FSG +S +P + T ++ + Q + Sbjct: 123 SIANSRDESGKYIFSGNQTSTQPFA-FDTAGNIVYSGDSGVRQAVVASGVTVGTNLPGDS 181 Query: 185 VSSMNAQQMTDFIKQLEDKFSDD 207 V A + DF + Sbjct: 182 VFMNAANAIGDFSVNYLPAQVGE 204 >gi|149182550|ref|ZP_01861022.1| flagellar hook-associated protein L [Bacillus sp. SG-1] gi|148849742|gb|EDL63920.1| flagellar hook-associated protein L [Bacillus sp. SG-1] Length = 286 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 78/210 (37%), Gaps = 13/210 (6%) Query: 76 LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQ 135 + S+A L +Q + ++ + + + V AN G+ Sbjct: 67 MDHSEAGLDHATNALQRVRELVIQGKNDTYGEQDREAISQEIEQIKQDLVEVANTKVAGR 126 Query: 136 YLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTD 195 Y+F+G N P+ + + + +L E S+ L +++ + +Q++ Sbjct: 127 YIFNGTNVDSAPV----AHGEPPVVTINT--EDYLVEVSQGLNLKANIDADQVFSQELFT 180 Query: 196 FIKQLEDKFSDDEYWANNWSNASDHNIKYRIK--DTEGIDVSANVNMRGIRD--IMFVAV 251 ++ ++ FS D ++ + + ++ +I E + A N + D + V Sbjct: 181 TLEDIKKTFSKD--YSADKMDKLLTDLDSKIGSLQAERSETGARYNRLEMIDDRLTKTEV 238 Query: 252 IGTEFLSKNLTDGARNVLTK-KMLSTVQQG 280 + + +S N V+T + +V Q Sbjct: 239 MANQIISDNEDADIERVITDLRAQESVHQA 268 Score = 43.9 bits (102), Expect = 0.037, Method: Composition-based stats. Identities = 12/120 (10%), Positives = 40/120 (33%) Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 N+ + E + K + K+L+ + + + +R+ G Sbjct: 166 ANIDADQVFSQELFTTLEDIKKTFSKDYSADKMDKLLTDLDSKIGSLQAERSETGARYNR 225 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + L + + IS + + L + + + + ++ + +++++L Sbjct: 226 LEMIDDRLTKTEVMANQIISDNEDADIERVITDLRAQESVHQAALSVGARIIQPTLMDFL 285 >gi|123442777|ref|YP_001006754.1| flagellar hook-associated protein FlgL [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089738|emb|CAL12591.1| flagellar hook-associated protein 3 [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 326 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 117/349 (33%), Gaps = 31/349 (8%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS ++++ ++ +++ TG+ + + Q ++ ++ Sbjct: 3 LSTSMLYQQNMQGVTNAQSLWMQSGQQLSTGKRVVNPSDDPMAASQAVMVSQSQSENSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + S LS +Q + ++ + ++ A L+ + + Sbjct: 63 TLARSFARQSSSLETTVLSQATSTIQSIQSLIIGAAKDSLSDDDRASMATQLQGLKDQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F G S + P T + D +Q ++ N + Sbjct: 123 NQANSTDGNGRYMFGGFQSDKAPFAVSNT-GEVTYVGGDVAIQQRVDSNRTMTVGHTGSS 181 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V + + N N + I +T ++ Sbjct: 182 V---------------FMALTSNATPEPNDVNGDPVAAESNIFNTI---------DTVLK 217 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + T+ + + +D K + + L+ ++ +A +G + ++ Sbjct: 218 SLKTPLQGATDAVKQQASDE-----MDKGIRGMANSLNNVLSVQAEIGTQLQELDSLDSL 272 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ I +S V+ ++A + ++ SY T +Q LS+ Sbjct: 273 GSDRTLINKQRLSDLQDVDWNSAISSYVMQQAALQASYTTFTNMQGLSL 321 >gi|37681984|gb|AAQ97872.1| FlgL [Photorhabdus luminescens] Length = 309 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 110/307 (35%), Gaps = 38/307 (12%) Query: 49 VTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN 108 + + Q + + + + S +S + +S +VQD+ LV + G + Sbjct: 34 ASQGVMVAQAEAQNQQYITARSFAKNAISMQLSVVSKAVGVVQDIHESLVATVNGVLSDE 93 Query: 109 KFPINAGMLRDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ 167 A L E V N TD G+Y+F+G + KP T +++ + + Sbjct: 94 DRNSLAIQLTGFKEQLVNLGNTTDGNGRYIFAGYKTDMKPF-DESTTGTVSYLGGSEEIT 152 Query: 168 GFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIK 227 ++ N ++ +V F+ + + + N S+ +I Sbjct: 153 QKVDSNRSMIIGHTGKQV----------FLSSTSNPIKEPDG------NQSESDIFK--- 193 Query: 228 DTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQ 287 ID++ + + D A L K + L+ I Sbjct: 194 ---TIDMAIQSLKTPFVE-----------ADQKSRDDALE-LLNKANRGARNALNNISSV 238 Query: 288 RAVLGISEKNINEERVFLQNKNNIID-TYISKSIGVEQHTAHAQLSTLINKIEMSYMITT 346 +VLG+ + E+ L + ++ + + +S+ + VE ++A + ++ SY Sbjct: 239 ESVLGL-QLREMEDLDNLGAERSLANKSRLSQLVDVEWNSAISNYYQQQAVLQASYKTFA 297 Query: 347 KLQKLSI 353 ++ +S+ Sbjct: 298 DMKGMSL 304 >gi|229541551|ref|ZP_04430611.1| flagellar hook-associated protein 3 [Bacillus coagulans 36D1] gi|229325971|gb|EEN91646.1| flagellar hook-associated protein 3 [Bacillus coagulans 36D1] Length = 297 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 46/127 (36%) Query: 24 KDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 K E++ +G+ + + + + + + + + + + ++ L Sbjct: 21 SKLAKYQEQLSSGKKINKLSDDPLSAMKGISYRRTVAQVKQYEDNFAEASTWIESTNDAL 80 Query: 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINS 143 +++Q + V A + + V AN +Y+F+G + Sbjct: 81 DEANQVLQRIRELTVEGATDTKTPTDRQSIADEVEQLRDQLVNIANTKVNDKYIFNGTRT 140 Query: 144 SEKPLNG 150 +EKP++G Sbjct: 141 TEKPISG 147 >gi|119947170|ref|YP_944850.1| flagellar hook-associated protein 3 [Psychromonas ingrahamii 37] gi|119865774|gb|ABM05251.1| flagellar hook-associated protein 3 [Psychromonas ingrahamii 37] Length = 296 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 55/145 (37%), Gaps = 1/145 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS S M + N + L ++M TG+ ++ E+ + I++ Sbjct: 3 ISDSHFTNTMLTGMSKSNTELSTLLQQMYTGEKITKPSDDPIATIKLMGLEKTQAEISQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 +N V + H++++ + +Q L+ L G L + S V Sbjct: 63 KDNNENVKSGYQLYETHIANVVEGLQSTNELLLWGLNGTMTLEDRAGIVTELESLHASMV 122 Query: 126 TFANM-TDEGQYLFSGINSSEKPLN 149 + N G YLFSG + +KP N Sbjct: 123 STFNAKNSHGSYLFSGTATDQKPFN 147 >gi|150020230|ref|YP_001305584.1| flagellar hook-associated protein 3 [Thermosipho melanesiensis BI429] gi|149792751|gb|ABR30199.1| flagellar hook-associated protein 3 [Thermosipho melanesiensis BI429] Length = 295 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 48/152 (31%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ I ER + KLH+++ +G+ Y T + + Sbjct: 3 ITNGMINERTLFNIQHSLYRISKLHDKLSSGKEISYPSDDAVIATRASNISSRIRELKQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++ + + + + + +V G D + A L E Sbjct: 63 KRNVDHTQNFVNIYDSTIQELTNVYHRIKELIVRGANGVNDVAERESIAQELEKLKEHME 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSL 157 AN G+Y+F G S KP+ + Sbjct: 123 DIANTQLGGEYIFGGARSDLKPVENGKIQTPP 154 >gi|238927684|ref|ZP_04659444.1| flagellar hook-associated protein 3 [Selenomonas flueggei ATCC 43531] gi|238884400|gb|EEQ48038.1| flagellar hook-associated protein 3 [Selenomonas flueggei ATCC 43531] Length = 449 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 5/126 (3%) Query: 76 LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKF--PINAGMLRDSYESFVTFANMTDE 133 ++T+Q LSSM+ I + + D + P A ++ + V+ N Sbjct: 73 MNTTQTALSSMEDIQKTFKAKTIQGANDDKDEHSGDWPAIAREMKAQIQQIVSLGNTQLG 132 Query: 134 GQYLFSGINSSEKPLNGYFTKDSLAK---KSFDQMLQGFLEENSKSLLAGQHLEVSSMNA 190 +Y+FSG +P + K L++ K+ D F + S A ++ S++ Sbjct: 133 DRYVFSGQADLRQPFSLSDEKKPLSRGLAKTLDDRQAAFFNDVSNGNSADFLHQMLSLDG 192 Query: 191 QQMTDF 196 + Sbjct: 193 SDGKTY 198 Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 29/89 (32%) Query: 269 LTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAH 328 L+ ++ ++ G + L + I I+ + Sbjct: 360 LSSDGITLADTANQVTLQAHTETGARTQLYKNMTEVLTDHKENITRDITNVSSADVAELA 419 Query: 329 AQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + MS + ++ LS+++YL Sbjct: 420 MKMMQQQTIMSMSLSMGARILPLSLVDYL 448 >gi|146311253|ref|YP_001176327.1| flagellar hook-associated protein FlgL [Enterobacter sp. 638] gi|145318129|gb|ABP60276.1| flagellar hook-associated protein 3 [Enterobacter sp. 638] Length = 317 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 111/349 (31%), Gaps = 40/349 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST ++++ E + E+M TG+ + + + Q ++ + Sbjct: 3 ISTQMMYQQNMRGITESQSKWLGYGEQMATGKRVNRPSDDAIASSQAIVLSQAQSQNEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + +++S L+ + + +V G ++ A L+ + + Sbjct: 63 KLGRTFAKQKVSLEDNVLNQVNVAITSAQEKIVYAGNGTLSDDDRLSLASDLQGIRDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+++F+G + P + S + Q + +S +A H Sbjct: 123 NLANSTDGNGRFIFAGYKTETAPFDSATGTYSGGTEPITQ------QVDSARNMAISH-- 174 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 +Q+ + I + Y N D I Sbjct: 175 ----TGKQIFESITSNAQEVPGGGYGEPNMFKILDTAI---------------------- 208 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 A + + + + + ++ + ++ A +G ++ Sbjct: 209 -----AALKVPVDTDSGAAATQKEALQTAAVGIKNTQNNVLTVVADVGTKLNELDTLDSL 263 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + A + + ++ SY T +Q +S+ Sbjct: 264 GADRTLGQTQQMSDLVDVDWNAAISSYTMQQAALQASYKAFTDMQGMSL 312 >gi|91776316|ref|YP_546072.1| flagellar hook-associated protein FlgL [Methylobacillus flagellatus KT] gi|91710303|gb|ABE50231.1| flagellin-like protein [Methylobacillus flagellatus KT] Length = 304 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 109/351 (31%), Gaps = 52/351 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+++++ +L D +L +++ + + LE + + + Sbjct: 3 ISTNTLYQNGLSRLSQLQVDQDRLMQQISSKKRILTPADDPVGAARSLELQNSQRVNTQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++ + +L + ++ L D+ + A L++ E+ V Sbjct: 63 ERNRMFAENSMNAIEGNLQGVTDLLIAAKARLAEAGNASYDDVQRSYIAIDLQNDLEALV 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN D G YL++G ++ P +Q+ Q + N + +A Sbjct: 123 ALANAQDGSGNYLYAGYSTDTAPYT--LNAGGATYNGDNQVRQLQVSANRQLPVAENGPS 180 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V N + + + D V++ + + ++ Sbjct: 181 VFQANGNDVFAALATITDLL--------------------------QTPVTSPADAQALQ 214 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 D + +Q L ++ RA G + K I Sbjct: 215 DGLAA-----------------------ASDALQGTLDNVLTVRARNGSALKEIEALNSD 251 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 +++ +S+ ++ A + L+ +E + LS+ N Sbjct: 252 GSSRDLQYAKSLSELQDLDYAKALSDLAKQQTVLEAAQKAFVATTSLSLFN 302 >gi|330943215|gb|EGH45622.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. pisi str. 1704B] Length = 465 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ FE N + + K EE+ +G + +L+ Q+ + + + Sbjct: 3 ISTTQFFESTNTNYQRNYSNLNKTSEEVSSGIKLNTAGDDPVGAARVLQLAQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T++ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ETNIGTINTNAVTTETTLTSIIDTMQAAREQIVSAGSGAFTDSDRLAKASALKQYQSQIL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+FSG +S P Sbjct: 123 GLMNSQDPNGQYIFSGSKASTPP 145 >gi|312884827|ref|ZP_07744519.1| flagellar hook-associated protein FlgL [Vibrio caribbenthicus ATCC BAA-2122] gi|309367479|gb|EFP95039.1| flagellar hook-associated protein FlgL [Vibrio caribbenthicus ATCC BAA-2122] Length = 298 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 9/145 (6%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTG----QSSDYGLQLGARVTSILEWEQEKNH 61 +S S + M + N K ++M TG + SD + +L +E Sbjct: 3 VSDSQFSQMMLRSLQVNNAGLAKAMQQMSTGERLTKLSDDPMA----SIQLLNLGRESAA 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 +A+ + + V LS + HL S+ +Q++ ++ G + + Sbjct: 59 LAQYKSNIANVKTALSNQEVHLDSVNDSLQNLNDKVLWGANGTLTDGDRAAIIIEIESLR 118 Query: 122 ESFVTFANMTD-EGQYLFSGINSSE 145 +S V+ N D G+YLFSG + Sbjct: 119 DSVVSSLNAQDEGGRYLFSGTKTDS 143 >gi|242278418|ref|YP_002990547.1| flagellar hook-associated protein 3 [Desulfovibrio salexigens DSM 2638] gi|242121312|gb|ACS79008.1| flagellar hook-associated protein 3 [Desulfovibrio salexigens DSM 2638] Length = 402 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 51/406 (12%), Positives = 117/406 (28%), Gaps = 60/406 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS I+++ D + + ++ T + + A + +++ + + Sbjct: 3 VSTSQIYDQSITNVSRSLADYMNVSNQVATQKKINAPSDDPAGMGNVVNLRSYDQTLEDY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY---E 122 ++ +S + + + + M+ +G T M + + Sbjct: 63 YNN---TQYAMSLLGSADGLLSEASEIMISVKEQAEQGATGTYTAEQQQAMAVNMMGYQD 119 Query: 123 SFVTFANMTDEGQYLFSGINSSEKP---LNGYFTKDSLAKKSFDQMLQ------------ 167 S + AN YLFSG ++ P + G KS Sbjct: 120 SLLAIANSEIGDDYLFSGESTDTAPYEYVPGVTVTGDSPAKSDFAAFTGELDDPVIVEFT 179 Query: 168 --GFLEENSKSLLAGQHLEVSSMNAQQMTDFI--------KQLEDKFSDDEYWANNWS-- 215 G + +S + + I + + + S Sbjct: 180 SDGTIGADSVDYRYSLDGGSTWLTGTMDGTAIPPDTTMELGDVSVEMNAGTAVTAYDSDG 239 Query: 216 --------------NASDHNIKYRIKDTEGIDVSANVNM----------RGIRDIMFVAV 251 N SD + I ++ +DV++ + + Sbjct: 240 KTGGQFVVRNSLQYNGSDEAMAVGISESTELDVNSVGSDIFGGVNPDTGEPFSEPNMFEA 299 Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 I + D + T+ G + ++ + + +G E+ + L Sbjct: 300 ISDSIAYMWIGDEEATA---TTIETIDNGYNRMLIETSNVGAREEKADFTGQSLSLTRER 356 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + IS + +LS T+++ +SI+NYL Sbjct: 357 VASAISDEEDADSTALTIELSRSEYIYNAVLSSTSEVISMSIMNYL 402 >gi|94969958|ref|YP_592006.1| flagellin-like [Candidatus Koribacter versatilis Ellin345] gi|94552008|gb|ABF41932.1| flagellin-like protein [Candidatus Koribacter versatilis Ellin345] Length = 295 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 39/340 (11%), Positives = 93/340 (27%), Gaps = 59/340 (17%) Query: 18 LTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLS 77 L + E+ TG + +T ++ ++ + + ++ L Sbjct: 14 TLNRLTEGENNAIREVSTGNRLSAPSDDPSAMTLLIRNRASQSDCDRYVQNIGSISASLQ 73 Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 + + LS++ + + + G N A + + + AN T G Y Sbjct: 74 NADSALSNVTTSLNRAITLGLEGTGGTLSNANRSAIADEVSQIRDQVLALANTTFNGSYA 133 Query: 138 FSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFI 197 F G ++ P T S + D ++ + + A + + +N Sbjct: 134 FGGASTKTTPFVLDSTSVSGVRYQGDSTVEQVPIGDGSMVAANKPGDALFLNPA------ 187 Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 + + ++ GID + Sbjct: 188 GSVFGAL---------------QGMISALRSGSGIDTATTTLRSAFDQF----------- 221 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 +R G + + + F + + T + Sbjct: 222 ---------------------------SSERVSYGSTISRLQADSNFQSSSKVQLQTEEN 254 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 GV+ A ++L+ + ++ + S+L+YL Sbjct: 255 SLTGVDMAQAISELTQAETARNAALSAAARIGQNSLLDYL 294 >gi|330953733|gb|EGH53993.1| flagellar hook-associated protein FlgL [Pseudomonas syringae Cit 7] Length = 530 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ FE N + + K EE+ +G + +L+ Q+ + + + Sbjct: 3 ISTTQFFESTNTNYQRNYSNLNKTSEEVSSGIKLNTAGDDPVGAARVLQLAQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T++ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ETNIGTINTNAVTTETTLTSIIDTMQAAREQIVSAGSGAFTDSDRLAKASALKQYQSQIL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+FSG +S P Sbjct: 123 GLMNSQDPNGQYIFSGSKASTPP 145 >gi|313672182|ref|YP_004050293.1| hypothetical protein Calni_0217 [Calditerrivibrio nitroreducens DSM 19672] gi|312938938|gb|ADR18130.1| hypothetical protein Calni_0217 [Calditerrivibrio nitroreducens DSM 19672] Length = 1141 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 48/148 (32%), Gaps = 1/148 (0%) Query: 50 TSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGP-LVILLEGKTDNN 108 S + ++ + + + LS L I+++ V + Sbjct: 47 ASAINVQRTIDEGQQFSRNAENAISWLSNYDNELQRAFDIIRNAKSEYAVAGANDSQNAT 106 Query: 109 KFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQG 168 AG + + +S + N G+Y F+G + KP S K + + Sbjct: 107 SRKALAGDVANMLQSLIDVGNANYFGRYFFAGYKTDTKPFAADSRSISAVKINGNVNGAD 166 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDF 196 ++ + + L S+ + M D+ Sbjct: 167 LIKRDVFADLPELKEGSYSIEVKSMGDY 194 >gi|295707172|ref|YP_003600247.1| flagellar hook-associated protein FlgL [Bacillus megaterium DSM 319] gi|294804831|gb|ADF41897.1| flagellar hook-associated protein FlgL [Bacillus megaterium DSM 319] Length = 293 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 68/187 (36%), Gaps = 4/187 (2%) Query: 18 LTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLS 77 L ++ TG+ + T + + + + + + + Sbjct: 15 QISNSYNKLETLQNQLSTGKKINRPSDDPVVATKGMAYRSNLSEVNQYKRNLTEAQSWFD 74 Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 +S++ L + I+Q +V L G +++ A + ++ N G Y+ Sbjct: 75 SSESGLEQVNSILQRTKELVVQGLNGTNESDDRQAIAREIEQLKLDYMQVGNTQVAGNYI 134 Query: 138 FSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFI 197 F+G+N P+ ++++ + L F E SK + ++ ++ Q D + Sbjct: 135 FNGVNVGAPPI----SENASGIIESNINLDPFSVEVSKGIQLRVNIHPENIFGQGAFDLM 190 Query: 198 KQLEDKF 204 K ++ F Sbjct: 191 KNVQTAF 197 >gi|291562057|emb|CBL40873.1| Flagellin and related hook-associated proteins [butyrate-producing bacterium SS3/4] Length = 373 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 39/370 (10%), Positives = 114/370 (30%), Gaps = 24/370 (6%) Query: 9 SSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHS 68 SS++ R +L + K ++ TG + + + + + Sbjct: 6 SSVYRRYTSSLNDLQSNLNKSMNKVSTGAAYETAADNPLAYYQGKKMDHLYQDAKSKSSI 65 Query: 69 NSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA--GMLRDSYESFVT 126 + RL + +QK + + + LL+ +++K + L +S V+ Sbjct: 66 LGDIKNRLYQQEQGARDIQKTLSNSKTSMQYLLDSSHNSSKTSVQTKRDALLQDVQSMVS 125 Query: 127 FANMTDEGQYLFSGINSSEKPLN--------GYFTKDSLAKKSFDQMLQGFLEENSKSLL 178 N + Y++ G + + P + Y K S M + N+ Sbjct: 126 NLNSQYQDFYVYGGNDITTAPFSLSGDGKTLTYTHKYSDGTTKTVNMTMAYDTNNNTYSY 185 Query: 179 AGQHLEVSSM-NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSAN 237 +++++ A + + S+ + + ++ + ++ ++ ++ Sbjct: 186 HLSDDDLNNLVTAMREQGRVDIGYGDISNRQSLLDTYTGGLNMLTGL---TSDSLNAMSD 242 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGAR---NVLTKKMLSTVQQGLSG-------IIEQ 287 N + + + T+ L I Sbjct: 243 ANAKDAVKAALETTPVALLSRSVMACDNYINDTTTVDQFTDTMGSVLKDAANTEHTISTI 302 Query: 288 RAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTK 347 + LG + + L ++ + +G + + A ++ + + + + Sbjct: 303 YSDLGNKYSLVETTKTRLDTLSDNLTEEYKDILGADPYEAITEMFSYQYSYSAALKMGSN 362 Query: 348 LQKLSILNYL 357 L + S+ +++ Sbjct: 363 LMQSSLFDFI 372 >gi|291456952|ref|ZP_06596342.1| YhgE/Pip protein [Bifidobacterium breve DSM 20213] gi|291381363|gb|EFE88881.1| YhgE/Pip protein [Bifidobacterium breve DSM 20213] Length = 915 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 39/335 (11%), Positives = 95/335 (28%), Gaps = 33/335 (9%) Query: 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHI 62 +T ++T + + + D + +D LG+ +++I + + Sbjct: 164 STFVTT--VSNTVAAAISQAGDDLDQATNSTQNNVVAD----LGSVLSTIATVQDALTDL 217 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA-----GML 117 L + ++ A L Q LL D +K + Sbjct: 218 RTTLDQSDTALADARSTTASLQRSITAAQQASQQSGALLAETQDGSKVFAASLVSALDTS 277 Query: 118 RDSYESFV-------TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFL 170 N + + +++ LN K + + + L Sbjct: 278 SAQLSGLTVNVNNAAGTINQSFNTAQ--NSVDTITNALNSPLDKTATSLDTLKDALNK-- 333 Query: 171 EENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 AG + + +++ D I ++D S + N + + I T Sbjct: 334 --------AGISADTTDPTGKRIWDHINAIDDAISTQQAKINTFHEDTTRFIDSGKSATT 385 Query: 231 GIDVSANVNMRG---IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQ 287 + + + G + ++ GT S + + L + T+ + + Sbjct: 386 NLSGAMSGTATGGIAALNTARSSLTGTVMPSLTSSLNSFAALNGTLNGTLTSLSGTLDQT 445 Query: 288 RAVLGISEKNINEERVFLQNKNNIIDTYISKSIGV 322 + I + R + + + ++ I V Sbjct: 446 NGLFDQLSSTIAQTRTTIGSAQDSLNQIIDDVSTV 480 >gi|152997575|ref|YP_001342410.1| flagellar hook-associated protein 3 [Marinomonas sp. MWYL1] gi|150838499|gb|ABR72475.1| flagellar hook-associated protein 3 [Marinomonas sp. MWYL1] Length = 436 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 1/102 (0%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 + IL +E N + S + T L + L S+ + D L+ Sbjct: 45 GASQILMYEGNSNRLKIFDESIKMATSHLEYQEVALDSLNDSMDDAHSLLIQAQNDANTQ 104 Query: 108 NKFPINAGMLRDSYESFVTFANM-TDEGQYLFSGINSSEKPL 148 + ES N + +G Y+F+G ++ P Sbjct: 105 ADIDAIVQEVALITESMAELMNSKSADGNYIFAGTDTQGPPF 146 >gi|167567757|ref|ZP_02360673.1| flagellar hook-associated protein FlgL [Burkholderia oklahomensis EO147] gi|167574708|ref|ZP_02367582.1| flagellar hook-associated protein FlgL [Burkholderia oklahomensis C6786] Length = 303 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 6/131 (4%) Query: 72 VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT 131 +T RL +++ ++ + + D+ L+ +G P A L S V AN Sbjct: 69 LTSRLQLAESRMTGLGTGLGDVRDLLLWASDGSKPPQDLPAIAQTLETLRRSLVATANAK 128 Query: 132 DE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNA 190 D G YLFSG +P+ TK ++ ++ ++ + ++ EV++ N Sbjct: 129 DGEGNYLFSGTAIKTQPIQYDETKPVGSRYTY-----AGNDKQQEVIVGDGMTEVANDNM 183 Query: 191 QQMTDFIKQLE 201 ++M D + +LE Sbjct: 184 KEMADLLNKLE 194 >gi|15964424|ref|NP_384777.1| flagellin D protein [Sinorhizobium meliloti 1021] gi|307311566|ref|ZP_07591207.1| flagellin domain protein [Sinorhizobium meliloti BL225C] gi|17366268|sp|P58330|FLAD1_RHIME RecName: Full=Flagellin D gi|15073601|emb|CAC45243.1| Flagellin D [Sinorhizobium meliloti 1021] gi|306899583|gb|EFN30212.1| flagellin domain protein [Sinorhizobium meliloti BL225C] Length = 401 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 53/399 (13%), Positives = 122/399 (30%), Gaps = 58/399 (14%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T+ + ++ + + + +G A + + ++ Sbjct: 2 TSILTNVAAMAALQTLRGIDSNMEETQARVSSGLRVGTASDNAAYWSIATTMRSDNMALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ A + + ++V+++ LV E D K L+ S Sbjct: 62 AVQDALGLGAAKVDTAYAGMENAVEVVKEIRAKLVAATEDGVDKAKIQEEIEQLKQQLTS 121 Query: 124 FVTFANMTDEGQ-YLFSGINSSE-KPLNGYFTKDSL------------------------ 157 T A + G+ +L + I + K + G F +DS Sbjct: 122 IATAA--SFSGENWLQADITTPVTKSVVGSFVRDSSGVVSVKTIDYVLDGNSVLFDTVGD 179 Query: 158 ---------------------AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDF 196 + + + + + + A + +++ + Sbjct: 180 AGILDKIYNVSQASVTLPVNVNGTTTEYTVAAYAVDELIAAGATFDGDSANVTGYTVPAG 239 Query: 197 IKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF 256 F E W A D + + V+ V Sbjct: 240 GIDYNGNFVKVEG---TWVRAIDVAATGQEVVYDDGTTKWGVDTTVAGAPAINVVAPASI 296 Query: 257 LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYI 316 + ++T+ A+ ++ V + L +I + LG I + F+ + ID+ I Sbjct: 297 ENIDITNAAQAANLDALIRGVDEALEDLISATSALGSISMRIGMQEEFVSKLTDSIDSGI 356 Query: 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + + + + +L L + +++ +Q LSI N Sbjct: 357 GRLVDADMNEESTRLKALQTQQQLA------IQSLSIAN 389 >gi|163802596|ref|ZP_02196488.1| flagellar hook-associated protein L [Vibrio sp. AND4] gi|159173679|gb|EDP58498.1| flagellar hook-associated protein L [Vibrio sp. AND4] Length = 396 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 60/402 (14%), Positives = 132/402 (32%), Gaps = 52/402 (12%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQ 57 T IS+ ++ + + E++ +G+ SD L I Q Sbjct: 1 MLTRISSFHNYQSVQNDLRRQENKIHHNQEQLASGKQLIKPSDDPLA----THYIQSIGQ 56 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 ++ I + L + LV RL + +S+ ++ + + + ++ G L Sbjct: 57 QEEQIKQYLDAIVLVRNRLENQEVVVSNAEQFIDESKRISMEMINGAFSPEDRAAKKREL 116 Query: 118 RDSYESFVTFANMTD-EGQYLFSGINSSEKP-LNGYFTKDSLAKKSFDQMLQGFLEENSK 175 + +F+ AN D G Y+F+G +P Y S+ D + + N + Sbjct: 117 EEIANNFMALANTQDESGNYVFAGTKPKTQPFFRDY--DGSVVYTGDDYQRKMKVASNIE 174 Query: 176 SLLAGQHLEVSSMNAQQMTDF-------------IKQLEDKFSDDEYWANNWSNASDHNI 222 + +V S DF + Q DD + + + S+ Sbjct: 175 LGINYPGNKVFSEIPNPFGDFQPQYDLQEGSELLLSQATSASQDDSNYTVTFVDMSNGKF 234 Query: 223 KYRIK-DTEGIDVSANVNMRGIRD--------------------------IMFVAVIGTE 255 Y+++ D + V + GI+ I + Sbjct: 235 GYQLEKDGSVVQVDDYSPIDGIKYEGVNIQLKGQVSAGDSITLEPRQTFSIFDAFKETMQ 294 Query: 256 FLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 + +++D + +M Q + + R +G + ++ + ++ N + Sbjct: 295 WSESSVSDASATAQLHQMTEEFQAAFVHMNKVRTDVGANLSTLDIQEQNHEDFNLSLAKA 354 Query: 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S ++ A + S ++ S K + L++ NY+ Sbjct: 355 KSNFEDLDYSKAVIEFSENSRALQASQQAFGKTKDLTLFNYI 396 >gi|126452666|ref|YP_001064572.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei 1106a] gi|167843918|ref|ZP_02469426.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei B7210] gi|242316039|ref|ZP_04815055.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 1106b] gi|126226308|gb|ABN89848.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 1106a] gi|242139278|gb|EES25680.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 1106b] Length = 410 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 51/406 (12%), Positives = 123/406 (30%), Gaps = 54/406 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++ ++ + + +L++++ +G S ++ +A+ Sbjct: 3 ISSTQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++V L T L+S+ ++ L+ +G ++ A ++ S + + Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLN-----------GYFT-----KDSLAKKSFDQMLQG 168 T AN D G YLF+G + +P + Y D+ D Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNKPGGGVTYAGDYGARAVQIADTRTVSQGDNGANV 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDF-IKQLEDKFSDDEYWANNWSNA-------SDH 220 F+ L S+ + I D + ++ A +D+ Sbjct: 183 FMSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTITFGGTAAAPTYTVTDN 242 Query: 221 NIK----------------------------YRIKDTEGIDVSANVNMRGIRDI-MFVAV 251 ++ + DT + + + +A Sbjct: 243 SVTPPPTTAAQAYSSGQGINLGGQTVAVSGKPAVGDTFTVTPAPQAGTDVFATLDTVIAA 302 Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + + + A + + ++ ++ +A +G + + + Sbjct: 303 LKSPVGNSQTASTALTNTMATASTKLMNTMTNVLTVQASVGGRLQEVKAMQAVTTTNTLQ 362 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S A +Q L N + + ++Q LS+ YL Sbjct: 363 TTNSLSNLTDTNLPAAISQFLQLQNSLSAAQKAFVQMQNLSLFQYL 408 >gi|167561215|ref|ZP_02354131.1| flagellar hook-associated protein FlgL [Burkholderia oklahomensis EO147] gi|167568433|ref|ZP_02361307.1| flagellar hook-associated protein FlgL [Burkholderia oklahomensis C6786] Length = 410 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 70/178 (39%), Gaps = 3/178 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS+S ++ + + +L++++ +G S ++ +A+ Sbjct: 3 ISSSQLYSLNVNMMNDQQAQIAQLYQQVSSGVSLTTPADNPLAAAQAVQLSATSATLAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S+V L T L+S+ ++ L+ +G ++ A ++ S + + Sbjct: 63 TSNQSVVQTALQTESTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 T AN D G YLFSG + +P + + D + +++++ G + Sbjct: 123 TLANTADGAGNYLFSGFQPTTQPFSNK--PGGGVTYAGDYGARTVQIADTRTISQGDN 178 >gi|254182132|ref|ZP_04888729.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 1655] gi|184212670|gb|EDU09713.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 1655] Length = 410 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 50/406 (12%), Positives = 117/406 (28%), Gaps = 54/406 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++ ++ + + +L++++ +G S ++ +A+ Sbjct: 3 ISSTQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++V L T L+S+ ++ L+ +G ++ A ++ S + + Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLN-----------GYFT-----KDSLAKKSFDQMLQG 168 T AN D G YLF+G + +P + Y D+ D Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNKPGGGVTYAGDYGARAVQIADTRTVSQGDNGANV 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDF-IKQLEDKFSDDEYWANNWSNA-------SDH 220 F+ L S+ + I D + ++ A +D+ Sbjct: 183 FMSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTITFGGTAAVPTYTVTDN 242 Query: 221 NIKYRIKDTEGIDVS-------------------------ANVNMRGIRDIMFVAVIGTE 255 ++ S G + + Sbjct: 243 SVTPPTTTAAQAYSSGQGINLGGQTVAVSGKPAVGDTFTVTPAPQAGTDVFATLDTVIAA 302 Query: 256 F----LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + A + + ++ ++ +A +G + + + Sbjct: 303 LKSPVGNSQTASTALTNTMATASTKLMNTMTNVLTVQASVGGRLQEVKAMQAVTTTNTLQ 362 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S A +Q L N + + ++Q LS+ YL Sbjct: 363 TTNSLSNLTDTNLPAAISQFLQLQNSLSAAQKAFVQMQNLSLFQYL 408 >gi|126175139|ref|YP_001051288.1| flagellar hook-associated protein FlgL [Shewanella baltica OS155] gi|304409971|ref|ZP_07391590.1| flagellar hook-associated protein 3 [Shewanella baltica OS183] gi|307302316|ref|ZP_07582074.1| flagellar hook-associated protein 3 [Shewanella baltica BA175] gi|125998344|gb|ABN62419.1| flagellar hook-associated protein 3 [Shewanella baltica OS155] gi|304351380|gb|EFM15779.1| flagellar hook-associated protein 3 [Shewanella baltica OS183] gi|306914354|gb|EFN44775.1| flagellar hook-associated protein 3 [Shewanella baltica BA175] Length = 403 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 55/403 (13%), Positives = 139/403 (34%), Gaps = 53/403 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +S++ +F + + + K+ +++ +G+ + I Q+ + + Sbjct: 3 LSSAQLFNQSITSVLQKQTATSKILDQLSSGKKVNTAGDDPVASQGIDNLNQKNALVDQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T RL+ +++ L S + + M ++ + G + + A ++ S E + Sbjct: 63 MKNIDYATNRLAVAESKLGSAEDLTGLMRDQVMRAINGTLSGTERQMIADEMKGSLEELL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ-----------MLQGFLEEN 173 + AN D G Y+FSG ++ ++P + S D + + + Sbjct: 123 SIANSKDESGNYMFSGFSTDKEPFAFDNSTPPKIVYSGDSGVRNSLVQTGVAMGTNIPGD 182 Query: 174 SKSLLAGQHLEVSSMN--AQQMTDF------IKQLEDKFSDDE--YWANNWSNAS----- 218 S + A L S+N A Q +F I +D + +N + + Sbjct: 183 SAFMKAPNGLGDYSVNYLASQQGEFSVKTAKIADAATYVADTYTFNFTDNGAGGTNLQVL 242 Query: 219 ------------------------DHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGT 254 D I + + + + I + Sbjct: 243 DSANNPVANVANFDATNPVSFNGIDVKIDGKPSAGDSFTMEPQAEVSIFDTISSAIALIE 302 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 + S N + G ++L+ + G++ I R+V G + K + + + + Sbjct: 303 DPNSANTSQG--RAQLAQILNNIDSGVNQISSARSVAGNNLKVVESYTETHTEEKVVNTS 360 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S ++ +A + + + +K+ +S+ +++ Sbjct: 361 ALSLLEDLDYASAITEFEKQQLALNAVSNVFSKVGSVSLFDFI 403 >gi|239907785|ref|YP_002954526.1| flagellar hook-associated protein 3 [Desulfovibrio magneticus RS-1] gi|239797651|dbj|BAH76640.1| flagellar hook-associated protein 3 [Desulfovibrio magneticus RS-1] Length = 509 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 57/177 (32%), Gaps = 6/177 (3%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 +L+ + + + + + + L+ S + L+S+ ++ + G G Sbjct: 47 GAALVLQTRCDISQLTQYKRNITSAEGWLTQSDSALTSVSTLITSIKGYAEQGATGSVTE 106 Query: 108 NKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ 167 A +R ++ ++ AN GQ LF+G + + +S D+ Sbjct: 107 ENRGEIASAVRQYFQQLISLANTEYSGQSLFAGQKVDTEAFSEALWMNSN-----DETFN 161 Query: 168 GFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY 224 + S S++ Q M + FS W+ S + Sbjct: 162 AAVAA-SNGGFTLTGSSNSTLLVQFMGTDTAGHQPAFSYSADGGTTWTTGSYNTATT 217 >gi|163758023|ref|ZP_02165111.1| flagellin protein [Hoeflea phototrophica DFL-43] gi|162284312|gb|EDQ34595.1| flagellin protein [Hoeflea phototrophica DFL-43] Length = 324 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 115/352 (32%), Gaps = 40/352 (11%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T+S + +N D + +G D A + + ++ Sbjct: 2 TSIMTNSAAMAALQTLRSINSDMEMTQNRISSGYRVDTAADNSAYWSIATTMRSDNQAMS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ + + S ++V ++ LV E D K L++ S Sbjct: 62 TVKDALGLGAAKVDVAYTGMESSIEVVSEIKAKLVAAREPGVDKTKIDKELTELKNQLVS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A+ FSG N + ++ + + + G + L++ L Sbjct: 122 ISESAS--------FSGEN---------WLNNTTTAAAGTKSVVGGFNRDVNGLVSITTL 164 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 +V++ + + L D + NA D + + + Sbjct: 165 DVNTSTTTLIGAASENLGILTKDIDA------NALDPDAT-----------TTTARNYFL 207 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 D + LT + M+ V + + + + LG K I+ ++ Sbjct: 208 IDTGATTGTAASGTAIALTAATTDAQVDDMIRAVDSMFTQMTDAASNLGAVNKRISMQQD 267 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ N + ID+ I + + + + +L L + ++ +Q LSI N Sbjct: 268 FVSNLMDSIDSGIGRLVDADMNEESTRLKALQTQQQLG------IQSLSIAN 313 >gi|332982895|ref|YP_004464336.1| flagellar hook-associated protein 3 [Mahella australiensis 50-1 BON] gi|332700573|gb|AEE97514.1| flagellar hook-associated protein 3 [Mahella australiensis 50-1 BON] Length = 289 Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 51/153 (33%), Gaps = 3/153 (1%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T ++ I + ++ L K ++ TG+ + L + Sbjct: 1 MRIT--NSMMISNMLRDMSANL-NRLDKYQSQLATGRKIRVPSDDPVGASRSLRARTDLA 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + V L +++ L+ + ++Q V G + A L Sbjct: 58 RNHQYAKNVDDVISWLDMTESSLAELNSVLQRAREITVQGANGTLADEDRQKVAQELEQL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 + + N +Y+F+G ++ +P T Sbjct: 118 KQHVLQVGNNKYADRYIFAGTKTTAEPFASDGT 150 Score = 40.1 bits (92), Expect = 0.54, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 64/162 (39%), Gaps = 14/162 (8%) Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF- 256 K + F+ D ++ N D I+Y I I V+ N I I + + Sbjct: 139 KTTAEPFASDGTYSGN-----DGAIEYGIGPANNIKVNITGNDVDITGIYNLLNTVQQGL 193 Query: 257 -LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 ++ A+ L +++ L ++EQRA +G + L + + + Sbjct: 194 EGDDSVNLSAQ-------LGELEKKLDNVLEQRAAVGARANRAELVKNRLADDDITFNQL 246 Query: 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ V+ + ++S + E S + +++ + S+ ++L Sbjct: 247 LANVEDVDIASVSIKISEARSVYEASLLSASRIIQPSLADFL 288 >gi|262283895|gb|ACY40757.1| FlaD [Rhizobium leguminosarum bv. viciae] Length = 320 Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 36/334 (10%), Positives = 101/334 (30%), Gaps = 38/334 (11%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 TS+ + + +NK++ + +++ +G + + + + ++ Sbjct: 6 TSAAAVNALAVLRSINKEASQTQQQVSSGYRIETAADDASYWSVATVMRSDSTNLGTVGD 65 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 + L ++ + ++S ++ ++ LV E TD +K ++ ++ V Sbjct: 66 ALGLGAAKVDATYTAMNSAIDLIGEIRAKLVSAREPGTDKDKINAEISEYKEQLQTIVES 125 Query: 128 ANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSS 187 + G+ + A ++ GF+ + A SS Sbjct: 126 --TSFAGE--------------NWLLNGDTAAPPTWSIISGFVRAPTGEYQAQTIDFPSS 169 Query: 188 MNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM 247 D AS + + + R + Sbjct: 170 QT-------------ILIDKNN-------ASGGLLTKSVDANAINNSG--ATSRNYYLLN 207 Query: 248 FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQN 307 + + + + ML LS + A +G+ + I+++ + + Sbjct: 208 ANSTTPATGTEIAIDNNTTDAQLTDMLDVTDALLSSLTTTAASIGVLKTRIDDQIDYTAD 267 Query: 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 + ID + + + A + + + +M+ Sbjct: 268 LADSIDKSVGALVDTDMDEASIRQKAIETQKQMA 301 >gi|237810469|ref|YP_002894920.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei MSHR346] gi|237503583|gb|ACQ95901.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei MSHR346] Length = 410 Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 50/406 (12%), Positives = 118/406 (29%), Gaps = 54/406 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++ ++ + + +L++++ +G S ++ +A+ Sbjct: 3 ISSTQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++V L T L+S+ ++ L+ +G ++ A ++ S + + Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLN-----------GYFT-----KDSLAKKSFDQMLQG 168 T AN D G YLF+G + +P + Y D+ D Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNKPGGGVTYAGDYGARAVQIADTRTVSQGDNGANV 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDF-IKQLEDKFSDDEYWANNWSNA-------SDH 220 F+ L S+ + I D + ++ A +D+ Sbjct: 183 FMSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTITFGGTAAAPTYTVTDN 242 Query: 221 NIKYRIKDTEGIDVS-------------------------ANVNMRGIRDIMFVAVIGTE 255 ++ S G + + + Sbjct: 243 SVTPPTTTAAQAYSSGQGINLGGQTVAVSGKPAVGDTFTVTPAPQAGTDVFATLDTVISA 302 Query: 256 F----LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + A + + ++ ++ +A +G + + + Sbjct: 303 LKSPVGNSQTASTALTNTMATASTKLMNTMTNVLTVQASVGGRLQEVKAMQAVTTTNTLQ 362 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S A +Q L N + + ++Q LS+ YL Sbjct: 363 TTNSLSNLTDTNLPAAISQFLQLQNSLSAAQKAFVQMQNLSLFQYL 408 >gi|315127346|ref|YP_004069349.1| flagellar hook-associated protein FlgL [Pseudoalteromonas sp. SM9913] gi|315015860|gb|ADT69198.1| flagellar hook-associated protein FlgL [Pseudoalteromonas sp. SM9913] Length = 419 Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 50/138 (36%), Gaps = 1/138 (0%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 E ++ E + TGQ + A ++ + + + + + + + RL T Sbjct: 16 ILENQQNVAGAQERVTTGQKYLSTSENPAAISQGMLYTNKIETNEQLTKNINQLKGRLET 75 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANM-TDEGQYL 137 ++ L M + + + G D A L++ +S + N ++ G+YL Sbjct: 76 EESLLQGMNDTILEAQMLTIRAGNGSLDKGDLASVASELKELQKSLLNLMNSQSEGGKYL 135 Query: 138 FSGINSSEKPLNGYFTKD 155 FSG + T Sbjct: 136 FSGYQDDIQTYTFNSTNG 153 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 6/109 (5%) Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLG---ISEKNINEERVFLQNK 308 + + L + N L ++ I+ +A LG + + + L Sbjct: 314 LIISLNDEQLDEAQINQALSDGLIQLKNASEQIVFTQAGLGGRMNVVERVTDSNSALDIN 373 Query: 309 NNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 N S I ++ A + L+ + ++ S +L KLS+ +YL Sbjct: 374 N---QENRSSLIEIDAAEAISDLTKHESGLQASQATFGRLAKLSLFDYL 419 >gi|15964423|ref|NP_384776.1| flagellin B protein [Sinorhizobium meliloti 1021] gi|307311565|ref|ZP_07591206.1| flagellin domain protein [Sinorhizobium meliloti BL225C] gi|17366440|sp|Q03842|FLAB1_RHIME RecName: Full=Flagellin B gi|152225|gb|AAA26280.1| flagellin B [Sinorhizobium meliloti] gi|15073600|emb|CAC45242.1| Flagellin B [Sinorhizobium meliloti 1021] gi|306899582|gb|EFN30211.1| flagellin domain protein [Sinorhizobium meliloti BL225C] Length = 394 Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 53/392 (13%), Positives = 116/392 (29%), Gaps = 50/392 (12%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T+ + + + + + +G A + + ++ Sbjct: 2 TSILTNIAAMAALQTLRTIGSNMEETQAHVSSGLRVGQAADNAAYWSIATTMRSDNMALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ + + S ++V+++ LV E D K L+D S Sbjct: 62 AVQDALGLGAAKVDTAYSGMESAIEVVKEIKAKLVAATEDGVDKAKIQEEIDQLKDQLTS 121 Query: 124 FVTFANMTDEGQY-----LFSG----------------------------INS------S 144 A + G+ L G NS Sbjct: 122 IAEAA--SFSGENWLQADLSGGPVTKSVVGSFVRDAGGAVSVKKVDYSLNTNSVLFDTAG 179 Query: 145 EKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKF 204 + S A + + G E + L +S D+ Sbjct: 180 NTGILDKVYNVSQASVTLPVNVNGTTSEYTVGAYNVDDLIDASATFD--GDYANVGAGAL 237 Query: 205 SDD-EYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTD 263 + D +W A D + + V+ + ++T Sbjct: 238 AGDYVKVQGSWVKAVDVAATGQEVVYDDGTTKWGVDTTVTGAPATNVAAPASIATIDITI 297 Query: 264 GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE 323 A+ +++ V + L+ + A LG I+ + F+ ++ ID+ + + + + Sbjct: 298 AAQAGNLDALIAGVDEALTDMTSAAADLGSIAMRIDLQSDFVNKLSDSIDSGVGRLVDAD 357 Query: 324 QHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + +L L + +++ +Q LSI N Sbjct: 358 MNEESTRLKALQTQQQLA------IQSLSIAN 383 >gi|305432071|ref|ZP_07401238.1| flagellin family protein [Campylobacter coli JV20] gi|304445155|gb|EFM37801.1| flagellin family protein [Campylobacter coli JV20] Length = 754 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 44/133 (33%) Query: 18 LTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLS 77 + ++ +++ +G + + E E + + + + + Sbjct: 15 TSMGAQSSLYQISQQLSSGIKIQNSYEDASVYIDNTRLEYELKTLEQVKQATNSAKEMTQ 74 Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 S L M K++ D + A L ES V AN + GQYL Sbjct: 75 NSMKALQDMVKLLGDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQLANTSVNGQYL 134 Query: 138 FSGINSSEKPLNG 150 F+G + KP + Sbjct: 135 FAGSQVANKPFDS 147 Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 59/171 (34%), Gaps = 5/171 (2%) Query: 189 NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI-- 246 + + + + + + + N + ++ ID N+ I+D+ Sbjct: 587 SGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSLTID---EPNVDIIKDLDS 643 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 M AV+ + + ++ RN + L + + + +G I Sbjct: 644 MIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNTTMGAYHNTIEGVNTRTS 703 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + S I V+ A L + S +T + +LS+LNY+ Sbjct: 704 FLSVNVQSIKSNVIDVDYGEAMMNLMQTQLAYQASLKASTTISQLSLLNYM 754 >gi|94500249|ref|ZP_01306782.1| Flagellin and related hook-associated protein [Oceanobacter sp. RED65] gi|94427548|gb|EAT12525.1| Flagellin and related hook-associated protein [Oceanobacter sp. RED65] Length = 412 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 50/150 (33%), Gaps = 9/150 (6%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IST F + + + +++ +G+ +D + T IL+ +Q+ + Sbjct: 3 ISTMQQFNSGLRSILNNQESTQRTQQQISSGRRVLTPADDPIA----ATQILQLQQDISL 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + + RL+ + L + + + V G A + + Sbjct: 59 RDQYEKNITSARNRLNLEDSILGGVIDNIDRIRELTVNAGNGSMTKEDRGYIASEIEERL 118 Query: 122 ESFVTFANMTDEGQ-YLFSGINSSEKPLNG 150 ++ V N D Y+F G P Sbjct: 119 DALVDLMNTKDASNTYIFGGFKGETVPFQE 148 >gi|302669848|ref|YP_003829808.1| flagellar hook-associated protein FlgL [Butyrivibrio proteoclasticus B316] gi|302394321|gb|ADL33226.1| flagellar hook-associated protein FlgL [Butyrivibrio proteoclasticus B316] Length = 703 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 30/66 (45%) Query: 292 GISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 G K ++ L N+ T S++ ++ QL+T E S M T K+ + Sbjct: 638 GTRSKRLDLINQRLMNQTTTFKTLQSENEDIDLAETATQLTTAQVTYEASLMATGKISQS 697 Query: 352 SILNYL 357 S++N++ Sbjct: 698 SLINFI 703 Score = 37.0 bits (84), Expect = 4.4, Method: Composition-based stats. Identities = 21/195 (10%), Positives = 59/195 (30%), Gaps = 2/195 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + +L+ M TG+ L +++ Sbjct: 3 ITNKIMQNNSLYNINNNKITEDQLNTMMSTGKKLTRPSDDPVIAIRALRLRSNVTQLSQY 62 Query: 66 LHSNSL-VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 N+ L+ + LS++ ++ D V + + + + Sbjct: 63 YEKNAKDAESWLNVTADALSTITAVLTDSVKQATKGSRMDLTLDDLDTIITQMDALAKEY 122 Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + N+ G+Y+F+G + L T + D+ + ++ + L + Sbjct: 123 YSTGNVDYAGRYVFTGYRTDTA-LTFDKTTTADYTDINDEFNASIISDSKRILGKYKLDS 181 Query: 185 VSSMNAQQMTDFIKQ 199 + ++ + ++ Sbjct: 182 ATVLDKTEADAVLEN 196 >gi|94312676|ref|YP_585885.1| flagellar hook-filament junction protein [Cupriavidus metallidurans CH34] gi|93356528|gb|ABF10616.1| flagellar hook-filament junction protein [Cupriavidus metallidurans CH34] Length = 412 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 45/409 (11%), Positives = 124/409 (30%), Gaps = 57/409 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++TS+++++ + + +++ TG+ T L Q ++ + Sbjct: 3 VATSTLYQQGLASMNNQQSKLLYVQQQLGTGRRILTPSDDPVAATRALGVAQAQSVNGQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L + L S+ +Q++ LV G + A L+ Y+ + Sbjct: 63 ATTRKQANASLGLEENTLQSVTTTIQNIQSLLVNAGNGTMSDTDRASLATALQGQYDQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAK----------------KSFDQMLQG 168 AN D G YLF+G+ ++ P ++ + +S + + Sbjct: 123 GLANADDGNGNYLFAGLQANTVPFAKNAAGAAVYQGDNSHQLLQVDVARQMESGNTGAEV 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKD 228 F+ + + ++ A + + NA+ ++Y++ + Sbjct: 183 FMSVTTNAGYVLNGNAGNAGTATYGPISVSDPTNPLYGTPLKLTFQPNATTGAMEYQVSN 242 Query: 229 TEGID---------------------------------VSANVNMRGIRDIMFVAVIGTE 255 + G + + + Sbjct: 243 ATTGTAIGTAQPYSDGTPINVGGVSFTVKGTPAAGDSLTAVPAQQAGADIFANLQNVISA 302 Query: 256 F---LSKNLTDGARNV----LTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNK 308 + A N + + + L ++ R+ +G + ++ QN+ Sbjct: 303 LKKPIDTGANTDAANANLQNVLATGIRQMGNSLDNVLTVRSSVGSRMQELDALDTIGQNR 362 Query: 309 NNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +S + +A + ++ + ++Q +++ YL Sbjct: 363 DLNSKSALSDLQDLNYASAITEYYQRQTALQGAQQSFMQIQGMNLFQYL 411 >gi|53717922|ref|YP_106908.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei K96243] gi|53724573|ref|YP_104806.1| flagellar hook-associated protein FlgL [Burkholderia mallei ATCC 23344] gi|121601423|ref|YP_994299.1| flagellar hook-associated protein FlgL [Burkholderia mallei SAVP1] gi|124383357|ref|YP_001028052.1| flagellar hook-associated protein FlgL [Burkholderia mallei NCTC 10229] gi|126439975|ref|YP_001057330.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei 668] gi|126449830|ref|YP_001082859.1| flagellar hook-associated protein FlgL [Burkholderia mallei NCTC 10247] gi|134283595|ref|ZP_01770294.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 305] gi|162210074|ref|YP_331889.2| flagellar hook-associated protein FlgL [Burkholderia pseudomallei 1710b] gi|167717671|ref|ZP_02400907.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei DM98] gi|167736712|ref|ZP_02409486.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei 14] gi|167813811|ref|ZP_02445491.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei 91] gi|167822328|ref|ZP_02453799.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei 9] gi|167892420|ref|ZP_02479822.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei 7894] gi|167900917|ref|ZP_02488122.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei NCTC 13177] gi|167917172|ref|ZP_02504263.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei BCC215] gi|217425064|ref|ZP_03456560.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 576] gi|226199736|ref|ZP_03795287.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei Pakistan 9] gi|254174714|ref|ZP_04881375.1| flagellar hook-associated protein 3 [Burkholderia mallei ATCC 10399] gi|254188064|ref|ZP_04894576.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei Pasteur 52237] gi|254196573|ref|ZP_04902997.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei S13] gi|254201903|ref|ZP_04908267.1| flagellar hook-associated protein 3 [Burkholderia mallei FMH] gi|254207238|ref|ZP_04913589.1| flagellar hook-associated protein 3 [Burkholderia mallei JHU] gi|254295822|ref|ZP_04963279.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 406e] gi|254359740|ref|ZP_04976011.1| flagellar hook-associated protein 3 [Burkholderia mallei 2002721280] gi|52208336|emb|CAH34269.1| putative flagellar hook-associated protein [Burkholderia pseudomallei K96243] gi|52427996|gb|AAU48589.1| flagellar hook-associated protein 3 [Burkholderia mallei ATCC 23344] gi|121230233|gb|ABM52751.1| flagellar hook-associated protein 3 [Burkholderia mallei SAVP1] gi|124291377|gb|ABN00646.1| flagellar hook-associated protein 3 [Burkholderia mallei NCTC 10229] gi|126219468|gb|ABN82974.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 668] gi|126242700|gb|ABO05793.1| flagellar hook-associated protein 3 [Burkholderia mallei NCTC 10247] gi|134245004|gb|EBA45099.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 305] gi|147747797|gb|EDK54873.1| flagellar hook-associated protein 3 [Burkholderia mallei FMH] gi|147752780|gb|EDK59846.1| flagellar hook-associated protein 3 [Burkholderia mallei JHU] gi|148028954|gb|EDK86886.1| flagellar hook-associated protein 3 [Burkholderia mallei 2002721280] gi|157805584|gb|EDO82754.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 406e] gi|157935744|gb|EDO91414.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei Pasteur 52237] gi|160695759|gb|EDP85729.1| flagellar hook-associated protein 3 [Burkholderia mallei ATCC 10399] gi|169653316|gb|EDS86009.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei S13] gi|217392084|gb|EEC32110.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 576] gi|225928087|gb|EEH24123.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei Pakistan 9] Length = 410 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 50/406 (12%), Positives = 117/406 (28%), Gaps = 54/406 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++ ++ + + +L++++ +G S ++ +A+ Sbjct: 3 ISSTQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++V L T L+S+ ++ L+ +G ++ A ++ S + + Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLN-----------GYFT-----KDSLAKKSFDQMLQG 168 T AN D G YLF+G + +P + Y D+ D Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNKPGGGVTYAGDYGARAVQIADTRTVSQGDNGANV 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDF-IKQLEDKFSDDEYWANNWSNA-------SDH 220 F+ L S+ + I D + ++ A +D+ Sbjct: 183 FMSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTITFGGTAAAPTYTVTDN 242 Query: 221 NIKYRIKDTEGIDVS-------------------------ANVNMRGIRDIMFVAVIGTE 255 ++ S G + + Sbjct: 243 SVTPPTTTAAQAYSSGQGINLGGQTVAVSGKPAVGDTFTVTPAPQAGTDVFATLDTVIAA 302 Query: 256 F----LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + A + + ++ ++ +A +G + + + Sbjct: 303 LKSPVGNSQTASTALTNTMATASTKLMNTMTNVLTVQASVGGRLQEVKAMQAVTTTNTLQ 362 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S A +Q L N + + ++Q LS+ YL Sbjct: 363 TTNSLSNLTDTNLPAAISQFLQLQNSLSAAQKAFVQMQNLSLFQYL 408 >gi|258625227|ref|ZP_05720139.1| flagellar hook-associated protein 3 [Vibrio mimicus VM603] gi|258582474|gb|EEW07311.1| flagellar hook-associated protein 3 [Vibrio mimicus VM603] Length = 299 Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 117/355 (32%), Gaps = 65/355 (18%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTG----QSSDYGLQLGARVTSILEWEQEKNH 61 IS + + M + N + ++M TG + SD + +L+ ++E + Sbjct: 3 ISDTQFSQMMLQSLQTNNAGLGNVMQQMSTGERLTKLSDDPMA----SVKLLKLDREGSA 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + ++V LS + HL S+ + ++ M ++ G + L+ Sbjct: 59 IKQYQDNINMVKTTLSNQEVHLDSVSESLKSMRELVLWGANGTLTDEDRDGMISKLKSLR 118 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 S + N D +G YLFSG + LN K + G ++ ++ G Sbjct: 119 GSIASSFNARDEDGHYLFSGTKTDTAALN---------KTDAGYVFNGNNDKRVVTVAKG 169 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +E S+M A+ + D +N+ +I Sbjct: 170 VTVE-SNMTAKDILDLGGG--------------------NNVLNQID------------- 195 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 V+ EF L + L+ ++ +G N++ Sbjct: 196 ----------VLIKEFEKPGKN---FKAKVDSSLKAIDDSLANVLGALTEIGGRYNNLDL 242 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 N +D ++ A +LS + ++ + K+ L++ + Sbjct: 243 MESAHSENNLFVDKVTGDLSKLDYGEASVRLSNFMAALQATQASYVKINDLNLFD 297 >gi|323341351|ref|ZP_08081595.1| flagellin family protein [Lactobacillus ruminis ATCC 25644] gi|323091228|gb|EFZ33856.1| flagellin family protein [Lactobacillus ruminis ATCC 25644] Length = 300 Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 110/358 (30%), Gaps = 78/358 (21%) Query: 13 ERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLV 72 + T ++ +L ++SD L + + + Q ++ + Sbjct: 8 NNLATTTNKVQSTMNQLASLKEVNKASDNPLLVSKILDLNVSISQNSSYAMTISDAKDWT 67 Query: 73 TKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD 132 T + Q SM I +V + G N++F L+ + V N Sbjct: 68 TTQDGALQLVEKSMNNIRNIIVSANNL---GALTNDEFKAYRSELQQEIGTVVDAMNTNY 124 Query: 133 EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQ 192 +G+Y+F G ++E P + +++ + G Sbjct: 125 DGRYIFGGSKTTEPPFE--------------------VTKDANGEVNGLK---------- 154 Query: 193 MTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVI 252 N + N+ I + I++ N N V+ Sbjct: 155 ----------------------YNGDETNLAREISNGVSINLLTNGNS----------VM 182 Query: 253 GTEFLSKNLTDGARNVLTK------KMLSTVQQGL-------SGIIEQRAVLGISEKNIN 299 + K+L ++ ++ + + L + I+ +G E I+ Sbjct: 183 NAQGAGKDLGTFFNELVADLDKHDEAAIADLSKKLGEVDVFKNNIVNYNTRIGAIENRID 242 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ + +S V+ + + + + + + TK+ + ++L+Y+ Sbjct: 243 AAKDRNDSEKITLKNTLSTRQDVDIAQKYMEYQNQMLAYKSTLAMGTKIMQTTVLDYM 300 >gi|107100532|ref|ZP_01364450.1| hypothetical protein PaerPA_01001557 [Pseudomonas aeruginosa PACS2] gi|313106042|ref|ZP_07792301.1| flagellar hook-associated protein 3 [Pseudomonas aeruginosa 39016] gi|13183734|gb|AAK15325.1|AF332547_2 flagellar hook-associated protein type 3 FlgL [Pseudomonas aeruginosa] gi|310878803|gb|EFQ37397.1| flagellar hook-associated protein 3 [Pseudomonas aeruginosa 39016] Length = 433 Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 52/144 (36%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST F D + E++ TG+ +L +QE+ + Sbjct: 3 ISTIQAFNNSVNGISRNYADLNRTFEQISTGKRILTPADDPVGSVRLLRLDQEQGLNEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS + L S+ ++Q + +G D+N A LR + + Sbjct: 63 KTGMTEAKNSLSQEETILRSVGNVLQRIREIAGQAGDGALDSNDKKSLASELRQREDELL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL 148 N D G+YLFSG S +P Sbjct: 123 NLLNSRDASGKYLFSGSQGSVQPF 146 Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 44/107 (41%), Gaps = 1/107 (0%) Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 + + ++ D R+ T L+ + + + + +G + F+ + Sbjct: 327 ALESSTDNQAGNDAIRDA-TAVALTNLSAVAAAVDGGQGKIGARLNTVESTETFIDDVKL 385 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +S+ ++ A ++LS ++ + K+Q LS+ NYL Sbjct: 386 VNASVMSQIQDLDYAEALSRLSLQSTIMDAAQQSYVKIQGLSLFNYL 432 >gi|254261806|ref|ZP_04952860.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 1710a] gi|254220495|gb|EET09879.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 1710a] Length = 410 Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 70/178 (39%), Gaps = 3/178 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++ ++ + + +L++++ +G S ++ +A+ Sbjct: 3 ISSTQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++V L T L+S+ ++ L+ +G ++ A ++ S + + Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 T AN D G YLF+G + +P + + D + +++++ G + Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNK--PGGGVTYAGDYGARAVQIADTRTVSQGDN 178 >gi|167909136|ref|ZP_02496227.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei 112] Length = 410 Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 50/406 (12%), Positives = 117/406 (28%), Gaps = 54/406 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++ ++ + + +L++++ +G S ++ +A+ Sbjct: 3 ISSTQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++V L T L+S+ ++ L+ +G ++ A ++ S + + Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLN-----------GYFT-----KDSLAKKSFDQMLQG 168 T AN D G YLF+G + +P + Y D+ D Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNKPGGGVTYAGDYGARAVQIADTRTVSQGDNGANV 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDF-IKQLEDKFSDDEYWANNWSNA-------SDH 220 F+ L S+ + I D + ++ A +D+ Sbjct: 183 FMSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTITFGGTAAAPTYTVTDN 242 Query: 221 NIKYRIKDTEGIDVS-------------------------ANVNMRGIRDIMFVAVIGTE 255 ++ S G + + Sbjct: 243 SVTPPTTTAAQAYSSGQGINLGGQTVAVSGKPAVGDTFTVTPAPQAGTDVFATLDTVIAA 302 Query: 256 F----LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + A + + ++ ++ +A +G + + + Sbjct: 303 LESPVGNSQTASTALTNTMATASTKLMNTMTNVLTVQASVGGRLQEVKAMQAVTTTNTLQ 362 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S A +Q L N + + ++Q LS+ YL Sbjct: 363 TTNSLSNLTDTNLPAAISQFLQLQNSLSAAQKAFVQMQNLSLFQYL 408 >gi|325289236|ref|YP_004265417.1| flagellar hook-associated protein 3 [Syntrophobotulus glycolicus DSM 8271] gi|324964637|gb|ADY55416.1| flagellar hook-associated protein 3 [Syntrophobotulus glycolicus DSM 8271] Length = 458 Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 41/129 (31%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 KL + + + + + L+ I ++ + ++ + + L Sbjct: 23 LSKLQAQASSQKKIEVPSDDPVVASRSLKLTSYVAKIQQQQKNAEDAGSWMTYTDSALEQ 82 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 + I+ + V G + + + AN G+Y+ +G ++ E Sbjct: 83 IGDILTTIREKTVEAANGTLTAEDQAKILAEIEELESGIIEIANSAYGGRYVLAGYSTDE 142 Query: 146 KPLNGYFTK 154 P+ T Sbjct: 143 APVEAVSTA 151 >gi|254239445|ref|ZP_04932767.1| flagellar hook-associated protein type 3 FlgL [Pseudomonas aeruginosa 2192] gi|126192823|gb|EAZ56886.1| flagellar hook-associated protein type 3 FlgL [Pseudomonas aeruginosa 2192] Length = 433 Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 52/144 (36%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST F D + E++ TG+ +L +QE+ + Sbjct: 3 ISTIQAFNNSVNGISRNYADLNRTFEQISTGKRILTPADDPVGSVRLLRLDQEQGLNEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS + L S+ ++Q + +G D+N A LR + + Sbjct: 63 KTGMTEAKNSLSQEETILRSVGNVLQRIREIAGQAGDGALDSNDKKSLASELRQREDELL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL 148 N D G+YLFSG S +P Sbjct: 123 NLLNSRDASGKYLFSGSQGSVQPF 146 Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 44/107 (41%), Gaps = 1/107 (0%) Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 + + ++ D R+ T L+ + + + + +G + F+ + Sbjct: 327 ALESSTDNQAGNDAIRDA-TAVALTNLSAVAAAVDGGQGKIGARLNTVESTETFIDDVKL 385 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +S+ ++ A ++LS ++ + K+Q LS+ NYL Sbjct: 386 VNASVMSQIQDLDYAEALSRLSLQSTIMDAAQQSYVKIQGLSLFNYL 432 >gi|238751768|ref|ZP_04613256.1| Flagellar hook-associated protein 3 [Yersinia rohdei ATCC 43380] gi|238710039|gb|EEQ02269.1| Flagellar hook-associated protein 3 [Yersinia rohdei ATCC 43380] Length = 320 Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 93/274 (33%), Gaps = 31/274 (11%) Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYLFS 139 LS +Q + ++ + ++ A L+ + + AN TD G+Y+F Sbjct: 72 TVLSQATTTIQSIQSLIIGAAKDSLSDDDRASMATQLQGLKDQLLNQANSTDGNGRYMFG 131 Query: 140 GINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQ 199 G S P ++ D + ++ N + + + Sbjct: 132 GFKSGTAPFA-VSATGAVTYVGGDVAITQKVDTNRSMTVGH--------TGDDIFMKLTS 182 Query: 200 LEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSK 259 + AN + AS+ NI I + + S + ++G + S Sbjct: 183 NAKP---EPNDANGNAVASESNIFNTI---DTVLKSLSTPLQG------ATETVKQQASD 230 Query: 260 NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKS 319 +L G R + L+ ++ +A +G + + ++ I +S Sbjct: 231 DLNKGIRGM---------ANSLNNVLSVQAEIGTQLEELVSLDSLGADRTLINKDRLSDL 281 Query: 320 IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + V+ ++A + ++ SY T +Q LS+ Sbjct: 282 VDVDWNSAISSYVMQQAALQASYTTFTNMQGLSL 315 >gi|124268247|ref|YP_001022251.1| flagellin-related hook-associated protein [Methylibium petroleiphilum PM1] gi|124261022|gb|ABM96016.1| flagellin-related hook-associated protein [Methylibium petroleiphilum PM1] Length = 398 Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 55/394 (13%), Positives = 104/394 (26%), Gaps = 42/394 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STSS ++ + ++ + E+M + + + + A Sbjct: 3 VSTSSTYDATIANLQRRAQELSRSQEQMSSLKRVNRASDDPTAAARAERALAVEARSAAT 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + +S +++ L ++Q +V + + A LR + Sbjct: 63 QRAIDASMNAVSQTESTLGDALGLLQQARDSVVSAGNASFSDAERANLAISLRQMRAELL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 T AN D G YLF+G +S P T S + L+ Sbjct: 123 TIANSPDGAGSYLFAGQGASNPPFVDTPTGVQFRGVSGETGAPSTEPLPLTMDGRSTWLQ 182 Query: 185 VSS-----MNAQQMTDFIK---------------QLEDKFSDDEYWANNWSNASDHNIKY 224 SS + + ++ D N Sbjct: 183 ASSGNGVFVTSATQQAGTGWINTGSVIDPSAATGDPYSLSFTVAGGVTTYTVLRDGNPTA 242 Query: 225 ------------RIKDTEGIDVSANVNMRGIRDIMFVAVI---------GTEFLSKNLTD 263 I A + A + TE + + Sbjct: 243 LTDVPYQSGQAIEIDGLSFTVTGAPADADRFDITPSSASLSIFDVLDRVATELETPGRNN 302 Query: 264 GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE 323 G L + + + QRAV G + I+ L + T S++ ++ Sbjct: 303 GQIAQSVATALRDIDASSAKLTAQRAVAGETLNRIDRAAERLSGQKLAAQTDRSQAEDLD 362 Query: 324 QHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 A + E + +Q LS+ YL Sbjct: 363 MVEAISTFQKQQTGYEAALKSYASVQNLSLFQYL 396 >gi|78045209|ref|YP_359819.1| flagellar hook-associated protein 3 [Carboxydothermus hydrogenoformans Z-2901] gi|77997324|gb|ABB16223.1| flagellar hook-associated protein 3 [Carboxydothermus hydrogenoformans Z-2901] Length = 287 Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 10/155 (6%) Query: 21 ELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQ 80 D K + + G++ ++ +++ + + + L+T+ Sbjct: 18 RTLADMEKSQQMLSNGKALTKPSDDPVKLLRAMKYRSDITQGEQYQRNIEDGLNWLNTTD 77 Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSG 140 A L+ + ++Q + V G A ++ E AN G+Y+F G Sbjct: 78 AALNELTNLLQRVKELTVYGANGALPQESLNSIAEEIKQIKEQVGVIANTQFAGKYIFGG 137 Query: 141 INSSEKPLNG----------YFTKDSLAKKSFDQM 165 ++P +G YF S K + + Sbjct: 138 TEVEKQPWDGSNWQGNSSGIYFEIGSNIKVQVNTV 172 Score = 37.4 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 85/276 (30%), Gaps = 23/276 (8%) Query: 90 VQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLN 149 Q M+ L + D K D + N+ D +L N+++ LN Sbjct: 26 SQQMLSNGKALTKPSDDPVKLLRAMKYRSDITQGEQYQRNIEDGLNWL----NTTDAALN 81 Query: 150 GYFTKDSLAKKSFDQMLQGFLEENSKSLLA----GQHLEVSSMNAQQMTD----FIKQLE 201 K+ G L + S + +A +V + Q ++E Sbjct: 82 ELTNLLQRVKELTVYGANGALPQESLNSIAEEIKQIKEQVGVIANTQFAGKYIFGGTEVE 141 Query: 202 DKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNL 261 + D W N S I + I + VN G+ V + ++ Sbjct: 142 KQPWDGSNWQGNSSG-----IYFEIGSN----IKVQVNTVGLPLFTNVMQTLDQIINHLT 192 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 L ++ L+ ++ RA +G + + L + +SK+ Sbjct: 193 AGDV--AAVSSDLGSLDNNLNTVLAVRADVGARTNRLELMQNRLLAQLETEKELLSKTED 250 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + L N + + ++ +++++L Sbjct: 251 ADIAATIIDLKNQENVYRSALAVGARILPPTLVDFL 286 >gi|292670030|ref|ZP_06603456.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] gi|292648331|gb|EFF66303.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] Length = 450 Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 8/170 (4%) Query: 76 LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKF--PINAGMLRDSYESFVTFANMTDE 133 ++++Q LS M+ I + + D P A ++ + ++ N Sbjct: 74 MNSTQTALSGMEDIQKTFKAKTIQGANDDKDEKSGDWPAIAREMKAGVQQIISLGNTQLG 133 Query: 134 GQYLFSGINSSEKPLNGYFTKD---SLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNA 190 +Y+FSG ++P D K+ D F S + A ++ S++ Sbjct: 134 DRYIFSGQADLKQPFTMTSEADMRRRGLAKTLDDRQAAFFNNASNNDSADFLHQMLSLDG 193 Query: 191 QQMTD-FIKQLEDKFSDDEYWANNWSN--ASDHNIKYRIKDTEGIDVSAN 237 ++ L E+ + + AS + I AN Sbjct: 194 SDGNTYYLNTLTGDIYTKEFVQEGYKDVVASGRSTVSTADRVGNITTGAN 243 Score = 39.3 bits (90), Expect = 0.84, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 30/89 (33%) Query: 269 LTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAH 328 L+ ++ ++ G + + L + I I+ + Sbjct: 361 LSSDGVTLADVANQVTLQAHTETGSRSRLYTDMTSILTDHAENITRDITNVSATDVAELA 420 Query: 329 AQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + MS + ++ LS+++YL Sbjct: 421 TKMMQQQTIMSMSLSMGARILPLSLVDYL 449 >gi|206889250|ref|YP_002249840.1| flagellar hook-associated protein 3 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741188|gb|ACI20245.1| flagellar hook-associated protein 3 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 475 Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 54/155 (34%), Gaps = 13/155 (8%) Query: 1 MK-TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEW 55 MK TTG + MN + K +++ TG+ SD + + + I+++ Sbjct: 1 MKVTTGFFYKTFINDMNTQI----EAMYKAQKQLTTGKRVLSPSDDPVAI----SRIVKY 52 Query: 56 EQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAG 115 + E + + E S+ + ++ ++ + V A Sbjct: 53 KTELSALDEYSRVIDTAKIYNSSLETAINDLKNMAIKAKQYAVNGSTDTLSATDRLALAQ 112 Query: 116 MLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNG 150 + + + N G+Y+F G + P+N Sbjct: 113 EVDTLIQRSIETINTKVSGRYIFGGYKADTPPVNS 147 >gi|167585201|ref|ZP_02377589.1| flagellar hook-associated protein FlgL [Burkholderia ubonensis Bu] Length = 413 Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 41/367 (11%), Positives = 105/367 (28%), Gaps = 57/367 (15%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 ++ +++ + + L L S+ ++ ++ LV +G + Sbjct: 45 GAAQAVQLSMTSATLSQYTSNQNAALASLQAEDHALGSVNDVLTNIQTTLVRAGDGSLSD 104 Query: 108 NKFPINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFT------------- 153 + A ++ + + +T AN D G YLF+G + +P Sbjct: 105 SDRSALATQIQSARDQLLTIANSDDGAGNYLFAGFKNGSQPFTNKAGGGVNYVGDTGTRN 164 Query: 154 ---KDSLAKKSFDQMLQGF-----LEENSKSLLAGQHLEVSSMNAQQMTDFIKQL----E 201 DS D F + + +++ +T Sbjct: 165 VQIADSRTLSQGDNGAAVFMSVPTFGSQPVPAGSASNTGTGTISPVTVTSPSAATNNHQF 224 Query: 202 DKFSDDEYWANNWSNASDHNIKYR------------IKDTEGIDVSAN---VNMRGIRD- 245 A ++ + + I G+ V+ + N Sbjct: 225 AIAFSGPAGALTYTVTDNTVVPPSTTAALPYTAGAAISLGGGMTVAVSGAPANGDSFTVS 284 Query: 246 -----------IMFVAVIGTEFLSKNLTDGARNVLTKKMLST----VQQGLSGIIEQRAV 290 + I + ++ + K ++ + + + +A Sbjct: 285 PAPQAPGGADVFSTLDSIVAALKTPSVNNPVAMATLKNAMTAGATKLGNTMRNVTTIQAD 344 Query: 291 LGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 +G E+ I + Q + + + ++ + +Q + L N + + ++Q Sbjct: 345 VGGREQEIKAMQAVTQTNSLQVSSNLADLTSTNIVSTISQFTQLQNALTGAQKAFVQMQN 404 Query: 351 LSILNYL 357 LS+ Y+ Sbjct: 405 LSLFQYI 411 >gi|86356323|ref|YP_468215.1| flagellin C protein [Rhizobium etli CFN 42] gi|86280425|gb|ABC89488.1| flagellin C protein [Rhizobium etli CFN 42] Length = 342 Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 102/334 (30%), Gaps = 38/334 (11%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 TS+ + + +NK++ + +++ +G + + + + ++ Sbjct: 28 TSAAAVNALAVLRSINKEASQTQQQVSSGYRIETAADDASYWSVATVMRSDSTNLGTIGD 87 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 + L ++ + ++S +V + LV E TD +K ++ +S V Sbjct: 88 ALGLGAAKVDATYTAMNSAIDLVSQIRAKLVAAREPGTDKDKINAEISEYKEQLKSVVES 147 Query: 128 ANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSS 187 + G+ +NS + + ++ GF+ ++ A SS Sbjct: 148 --TSFAGENWL--LNSDKTAPPTWS------------VISGFVRASTGEYQAQTIDFPSS 191 Query: 188 MNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM 247 D AS I + R + Sbjct: 192 QT-------------ILIDKNN-------ASGGLFTKAIDAQAINNTGTG--PRNYYLLD 229 Query: 248 FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQN 307 + + + ML S + A +G+ + I+++ + + Sbjct: 230 AGSTTPATGSEIAIDKNTTDAQLVDMLDVTDALFSSLTTTAASIGVMKTRIDDQIDYAAD 289 Query: 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 ++ ID + + + A + + + +M+ Sbjct: 290 LSDSIDKSVGALVDTDMDEASIRQKAIETQKQMA 323 >gi|148269977|ref|YP_001244437.1| flagellar hook-associated protein 3 [Thermotoga petrophila RKU-1] gi|147735521|gb|ABQ46861.1| flagellar hook-associated protein 3 [Thermotoga petrophila RKU-1] Length = 304 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 53/145 (36%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ I +R+ + K KLH+++ +G Y + K + + Sbjct: 3 VTNKMISDRVLFNIQTSLKRIAKLHDQLSSGYKVRYPSDDAVVAKRASDILTRKRELEQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 S V ++ + L ++ I Q + LV G + A + E+ V Sbjct: 63 QRSVDHVQTYVNAYDSALQTVSSITQRLRELLVRAANGTLSKAEREAIAEEIDKIKENLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNG 150 AN +Y+FSG + +P+ Sbjct: 123 EVANTRIGNEYIFSGYDVFSQPVEN 147 >gi|152987902|ref|YP_001349643.1| flagellar hook-associated protein FlgL [Pseudomonas aeruginosa PA7] gi|150963060|gb|ABR85085.1| flagellar hook-associated protein 3 [Pseudomonas aeruginosa PA7] Length = 433 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 51/144 (35%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST F D + E++ TG+ +L +QE+ + Sbjct: 3 ISTIQAFNNSVNGISRNYADLNRTFEQISTGKRILTPADDPVGSVRLLRLDQEQGLNEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS + L S+ ++Q + +G D+N A L + + Sbjct: 63 KTGMTEAKNSLSQEETILRSVGNVLQRIREIAGQAGDGALDSNDKKALASELSQREDELL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL 148 N D G+YLFSG S +P Sbjct: 123 NLLNSRDASGKYLFSGSQGSVQPF 146 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 44/107 (41%), Gaps = 1/107 (0%) Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 + + ++ D R+ T L+ + + + + +G + F+ + Sbjct: 327 ALESSTDNQAGNDAIRDA-TAVALTNLSAVAASVDGGQGRIGARLNTVESTETFIDDVKL 385 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + +S+ ++ A ++LS ++ + K+Q LS+ NYL Sbjct: 386 VNASVMSQIQDLDYAEALSRLSLQSTIMDAAQQSYVKIQGLSLFNYL 432 >gi|255022061|ref|ZP_05294067.1| Flagellar hook-associated protein flgL [Acidithiobacillus caldus ATCC 51756] gi|254968547|gb|EET26103.1| Flagellar hook-associated protein flgL [Acidithiobacillus caldus ATCC 51756] Length = 413 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 49/407 (12%), Positives = 117/407 (28%), Gaps = 54/407 (13%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + IST + + L ++ TG + D A L+ Q+ + Sbjct: 1 MSISPISTPVSYLIPTNAILQDQSQLTTLDRQLATGLAVDSPADNPAAAAQSLQIGQQLS 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 ++ + + L + + S+ +VQ + + T+ A +++ Sbjct: 61 ALSLDGTTAGIGQSDLQNLSSTIGSISTLVQSLRQTALAAANATTNGQDRQALADSVQEQ 120 Query: 121 YESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTK------------------------- 154 + + N +G YL SG S+ +P ++ Sbjct: 121 LQQLLQLGNSQTPDGNYLLSGSQSNTQPFLDSGSEVTYQGDAGTNTLQIAPGLTIPTSLS 180 Query: 155 --------DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSD 206 + + G + S+ ++ + S Sbjct: 181 GQFLLMDIPTGNGYAVVNASSGNQGTATISVGGVTDPAAAAEMDANHQKYSVTFSVATSG 240 Query: 207 DEYWANNWSNASDHNIKY---------RIKDTEGIDVSANVNMRGI-------RDIMFVA 250 + +NAS + + +E N + + Sbjct: 241 VAQSSYAITNASGTVVGSGVYTPGTSIDVAGSEFTINGNPANGDSFSIDPARQQSLFQTV 300 Query: 251 VIGTEFLSKNLTDGA----RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 LS +++GA +++ + QGL+ ++ +A +G S I + Sbjct: 301 QSMLTLLSTGVSNGAAGAQYEQGMSNVIANLNQGLTRLLTGQAAVGSSLAQIQAITQVNE 360 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 +++ S I Q + ++ + + +Q L++ Sbjct: 361 TESSNDQIAQSSLISANLPAVATQFAQGSASLQAALSAFSAMQNLNL 407 >gi|281412142|ref|YP_003346221.1| flagellar hook-associated protein 3 [Thermotoga naphthophila RKU-10] gi|281373245|gb|ADA66807.1| flagellar hook-associated protein 3 [Thermotoga naphthophila RKU-10] Length = 304 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 53/145 (36%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ I +R+ + K KLH+++ +G Y + K + + Sbjct: 3 VTNKMISDRVLFNIQTSLKRIAKLHDQLSSGYKVRYPSDDAVVAKRASDILTRKRELEQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 S V ++ + L ++ I Q + LV G + A + E+ V Sbjct: 63 QRSVDHVQTYVNAYDSALQTVSSITQRLRELLVRAANGTLSKAEREAIAEEIDKIKENLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNG 150 AN +Y+FSG + +P+ Sbjct: 123 EVANTRIGNEYIFSGYDVFSQPVEN 147 >gi|15642857|ref|NP_227898.1| flagellar hook-associated protein 3 [Thermotoga maritima MSB8] gi|4980571|gb|AAD35176.1|AE001695_2 flagellar hook-associated protein 3 [Thermotoga maritima MSB8] Length = 304 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 53/145 (36%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ I +R+ + K KLH+++ +G Y + K + + Sbjct: 3 VTNKMISDRVLFNIQTSLKRIAKLHDQLSSGYKVRYPSDDAVVAKRASDILTRKRELEQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 S V ++ + L ++ I Q + LV G + A + E+ V Sbjct: 63 QRSVDHVQTYVNAYDSALQTVSSITQRLRELLVRAANGTLSKAEREAIAEEIDKIKENLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNG 150 AN +Y+FSG + +P+ Sbjct: 123 EVANTRIGNEYIFSGYDVFSQPVEN 147 >gi|170288662|ref|YP_001738900.1| flagellar hook-associated protein 3 [Thermotoga sp. RQ2] gi|170176165|gb|ACB09217.1| flagellar hook-associated protein 3 [Thermotoga sp. RQ2] Length = 304 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 53/145 (36%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ I +R+ + K KLH+++ +G Y + K + + Sbjct: 3 VTNKMISDRVLFNIQTSLKRIAKLHDQLSSGYKVRYPSDDAVVAKRASDILTRKRELEQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 S V ++ + L ++ I Q + LV G + A + E+ V Sbjct: 63 QRSVDHVQTYVNAYDSALQTVSSITQRLRELLVRAANGTLSKAEREAIAEEIDKIKENLV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNG 150 AN +Y+FSG + +P+ Sbjct: 123 EVANTRIGNEYIFSGYDVFSQPVEN 147 >gi|152980733|ref|YP_001353118.1| FlgL flagellar hook-associated proteins 3 [Janthinobacterium sp. Marseille] gi|151280810|gb|ABR89220.1| FlgL flagellar hook-associated proteins 3 [Janthinobacterium sp. Marseille] Length = 404 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 1/186 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST++IFE + ++ K +++ +G + L +Q + + Sbjct: 3 ISTNTIFEMGSGKIGDMTLAMFKTQQQIASGLRILSPADDPVAAAAALGIDQAISINNQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L S+ ++Q + +V D+++ LR+++E + Sbjct: 63 ATNRANAKSALSEEESVLQSVTTLLQSIKTSVVGSGNASMDDSQRQAYVTQLRNNFEELL 122 Query: 126 TFANMT-DEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN G YLF G KP + +MLQ S +G + Sbjct: 123 GLANTRGANGDYLFGGYQVGNKPFTESAGGAVYSGDQGQRMLQVGAARQLSSSDSGSSIF 182 Query: 185 VSSMNA 190 M Sbjct: 183 EGGMTG 188 >gi|114562349|ref|YP_749862.1| flagellar hook-associated protein FlgL [Shewanella frigidimarina NCIMB 400] gi|114333642|gb|ABI71024.1| flagellar hook-associated protein 3 [Shewanella frigidimarina NCIMB 400] Length = 401 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 64/402 (15%), Positives = 144/402 (35%), Gaps = 53/402 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST +F++ + + ++ +G+ + I +Q+ I + Sbjct: 3 ISTGQMFQQNTNSILNKQSATNTIMAQIDSGKRVNTAGDDPVAAIGIDNLKQKNTLIDQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T + +++ L +V M ++ + G + + + A +R S E + Sbjct: 63 VKNIDYATSHIQQAESQLGQADTLVGSMKESVLRGINGSMTSAERQVIADDMRQSLEQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN D G Y+F+G ++ P F + S D ++ + + Sbjct: 123 SIANTKDESGNYIFAGNKTNSAPFA--FANNGDVVYSGDSGIRKSNVAAGVQVNTNVPGD 180 Query: 185 VSSMNA-QQMTDF-----------IKQLEDKFSDDEYWA---NNWSNASDHNIKYRIKDT 229 + MNA M D+ + K +D + ++S A D I T Sbjct: 181 AAFMNAPNAMGDYGVNYSSSQQGDLVVSSAKITDSTTYTPGSYSFSFADDGAGGLNISVT 240 Query: 230 EGI----------DVSANVNMRGIR------------------------DIMFVAVIGTE 255 + D S V++ GI D A+ E Sbjct: 241 DSAAPPVTTVTAFDASVPVSVSGIVVKVDGEPQAGDSFSIEEVAQVSIFDTFSKAIALFE 300 Query: 256 FLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 + T ++ L ++L+ + G++ + +QR++ G S K + + ++ I + Sbjct: 301 SGNDTQTPAGQSELA-QLLNNIDSGVNQMSQQRSLTGNSLKVLQQYSDNHIDEKLINTSA 359 Query: 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +SK ++ +A + + + + +K+ S+ +Y+ Sbjct: 360 LSKLEDLDFASAITEFEKQQVALSAASSLFSKVSSTSLFDYI 401 >gi|290474981|ref|YP_003467865.1| flagellar hook-filament junction protein [Xenorhabdus bovienii SS-2004] gi|289174298|emb|CBJ81088.1| flagellar biosynthesis; hook-filament junction protein [Xenorhabdus bovienii SS-2004] Length = 320 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 115/353 (32%), Gaps = 45/353 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 +ST+ ++ + ++ E++ TG+ SD L + + Q ++ Sbjct: 3 VSTNLLYSQKMDGILGAQSKWMRYGEQLSTGKRVINPSDDPLA----ASQSIMVSQSESK 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + + +S + S++ + ++ LV + ++D ++ L Sbjct: 59 NQQFMTARIFARNSMSAQLSITSNIVSVATNVFETLVAAADEQSDQDRESYAQQ-LEGFK 117 Query: 122 ESFVTFAN-MTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + N G+Y+F G + P + K + + +++N ++A Sbjct: 118 QQLLNLGNKTDGNGRYIFGGYKTDVPPFKA-DESGKIHYKGGHEEITQQVDDNRSMIIAH 176 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V + A+ ++ + IK +A+ + Sbjct: 177 TGKQVFLSTT-------TNPIKEPGGGTGEADVFAT-----LDLAIKALRTPYSTASESE 224 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 + + A L K ++ L AVLG+ + + + Sbjct: 225 K---------------------NDAME-LINKANRGIRNSLDNFSSVEAVLGLQLQELEQ 262 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ + + V+ ++ + ++ SY T L+ LS+ Sbjct: 263 LDSLGSERSISNKVRTGELVDVDWASSISSYYQQQAALQASYKAFTDLKGLSL 315 >gi|117928039|ref|YP_872590.1| flagellar hook-associated protein 3 [Acidothermus cellulolyticus 11B] gi|117648502|gb|ABK52604.1| flagellar hook-associated protein 3 [Acidothermus cellulolyticus 11B] Length = 298 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 32/84 (38%) Query: 274 LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLST 333 LS + L + +A G + I K N + +S V+ A +L+ Sbjct: 214 LSLIAGALDRMTSAQATEGAAYNRITAMNNAAGQKLNTLTGNLSDVQDVDTAQAVTELTM 273 Query: 334 LINKIEMSYMITTKLQKLSILNYL 357 + S ++ ++S+ ++L Sbjct: 274 QQVSYQASLAAMARVLQMSLTDFL 297 >gi|296157448|ref|ZP_06840283.1| flagellar hook-associated protein 3 [Burkholderia sp. Ch1-1] gi|295892220|gb|EFG72003.1| flagellar hook-associated protein 3 [Burkholderia sp. Ch1-1] Length = 407 Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 48/404 (11%), Positives = 124/404 (30%), Gaps = 52/404 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++ F + +L+ E+ +G S ++ +++ Sbjct: 3 ISSTQYFNMNVATMSDQQAQLSQLYAEISSGVSLSTPSDNPLGAAQAVQLSSTATTLSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L L S+ ++Q + ++ +G ++ A L+ + Sbjct: 63 TTNQGTALASLQQEDTTLGSVNTVLQTIHTLVLRAGDGSLNDGDRGSIATQLQSLRSQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTK----------------DSLAKKSFDQMLQG 168 T AN TD +G YLF+G SS +P DS ++ D + Sbjct: 123 TLANSTDPQGNYLFAGYQSSAQPYTTNSAGVVTYSGDTGTPVVQITDSHVVQTGDNGISI 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKD 228 F A + ++ ++ + ++ N+S+A+ + + Sbjct: 183 FGSVAPIGTSAVPAATTGNTGTGVISSVSLNNPTDPTNADKYSINFSSATTYTVSQTDPA 242 Query: 229 TEGIDVS-----------------------------------ANVNMRGIRDIMFVAVIG 253 T + S +M ++ + Sbjct: 243 TGAVTTSAPQAFTAGSAITLGGQSVTITGAPNAGDSFTVTPATQGSMDVFANLSQLITTL 302 Query: 254 TEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 +S + + ++ ++ ++ ++ +A +G E+ + + Q Sbjct: 303 QTPVSGGASTASFQSALTTSMAQLENTMNNVVTAQAAVGGREQEVQALQTVTQTNTLQTS 362 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ + + + ++ + K+Q +S+ YL Sbjct: 363 SNLADLTQTDMVKTIGKYTMTQAALQAAQQAFAKIQNISLFQYL 406 >gi|307721024|ref|YP_003892164.1| flagellin domain-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306979117|gb|ADN09152.1| flagellin domain protein [Sulfurimonas autotrophica DSM 16294] Length = 708 Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 83/229 (36%), Gaps = 16/229 (6%) Query: 20 KELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTS 79 ++N + +++++ +G Y T + + E I + S K + + Sbjct: 18 LKINNELFDVNKQIASGLKIQYAKDDVKTFTETMRLDNELVTIGQVKKSTESGYKVSNQT 77 Query: 80 QAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFS 139 L+ + + LV G ++ AG LR + F AN + GQ+LFS Sbjct: 78 DVVLNEFETSMNRTRTLLVNAANGTHSDDSLDAIAGELRGLEKHFKNLANTSINGQFLFS 137 Query: 140 GINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS---------SMNA 190 G + +P++ + D + FL NS E+ ++ Sbjct: 138 GSAVNTRPIDD-----NGVYHGNDAGMNSFLGSNSTQKYNLTGSELFLGEDRLTRRNVTT 192 Query: 191 QQMTDFIKQLEDKFSDDEYWANNWSN-ASDHNIKYRIKDTE-GIDVSAN 237 + + + + +F+ +++ D I+ + DT+ +D + Sbjct: 193 NVIQENLSKKYPEFTATSAENGSFATITKDDTIRDLMGDTDSTVDTATQ 241 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 34/90 (37%), Gaps = 14/90 (15%) Query: 282 SGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYI--------------SKSIGVEQHTA 327 GI A+L + +I+ + ++N + + + S I + A Sbjct: 619 QGIENAIAMLDKLQSHISRSHSTVGAQSNTLTSSLERSQLLEISTMTLRSSVIDTDVAEA 678 Query: 328 HAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +L L + K+ +LS++NYL Sbjct: 679 SLKLQQLNLNYQAMLSTVGKVSQLSLVNYL 708 >gi|83720036|ref|YP_440809.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis E264] gi|167617594|ref|ZP_02386225.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis Bt4] gi|257140540|ref|ZP_05588802.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis E264] gi|83653861|gb|ABC37924.1| flagellar hook-associated protein 3 [Burkholderia thailandensis E264] Length = 410 Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 72/185 (38%), Gaps = 3/185 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS+S ++ + + +L++++ +G S ++ +++ Sbjct: 3 ISSSQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++V L T L+S+ ++ ++ +G ++ A ++ S + + Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQSIMHAGDGGLSDSDRAALAAQIQGSRDHLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 T AN D G YLF+G + +P + + D + +++++ G + Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNK--PGGGVTYAGDYGARTVQIADTRTVSQGDNGA 180 Query: 185 VSSMN 189 M+ Sbjct: 181 SVFMS 185 >gi|264676577|ref|YP_003276483.1| flagellar hook-associated protein 3 [Comamonas testosteroni CNB-2] gi|262207089|gb|ACY31187.1| flagellar hook-associated protein 3 [Comamonas testosteroni CNB-2] Length = 404 Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 60/411 (14%), Positives = 125/411 (30%), Gaps = 62/411 (15%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSS-----DYGLQLGARVTSILEW 55 M I T+++++ V L E+ G+ D A Sbjct: 1 MSINRIGTANMYDSTINNLGSRQSSLVDLMEKTTAGKRVLRASDDPVAAAQAERARTRIT 60 Query: 56 EQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAG 115 E + + + ++ L +QD +V G D Sbjct: 61 RSENDQRVLGAQRDVIAQG-----ESELGKAHGALQDFRDLVVQAGNGSYDQVARDALVQ 115 Query: 116 MLRDSYESFVTFANMTD-EGQYLFSGINSSEKPLNG-----YFTKDSLAKKSFDQMLQGF 169 ++ + + +AN D G +F G+ S + PL + D L Sbjct: 116 QMQSLRDQILGYANAKDSNGLPIFRGLGSPDTPLQSTPPGSSSQLNPGQSTGSDNGLPIS 175 Query: 170 LEENSKSLLAGQHLEVSSMNAQQMTDF---------------------IKQLEDKFSDDE 208 L+ ++ L V +N + +D + + Sbjct: 176 LDGHAAWLNVPTGNGVFVVNGAASNSGKAWADVGSVTDPSKVTGDSYTLVFTKDPTTGEV 235 Query: 209 YWANNWSNASDHN----------------------IKYRIKDTEGIDVSANVNMRGIRDI 246 + N S+A+ N IK D + +S + + Sbjct: 236 SYEINSSSATATNPVVPTTPYKEGQAITVGGQQISIKGTPADGDSFTMSPSTRTDIFSVL 295 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 I T + + L + LS + G++ + R+ G K + ++ Sbjct: 296 DQA--IATVKGGTGGSTALQQGL-GRALSELDSGMNRVQAMRSYAGDQLKRADGLESDMK 352 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + S++ ++ TA +Q+ T ++ + ++QKLS+ NY+ Sbjct: 353 DQALTQEGARSRAEDIDMITALSQVDTQKVGLQAALQSYAQMQKLSLFNYI 403 >gi|296135665|ref|YP_003642907.1| flagellar hook-associated protein 3 [Thiomonas intermedia K12] gi|295795787|gb|ADG30577.1| flagellar hook-associated protein 3 [Thiomonas intermedia K12] Length = 417 Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 46/144 (31%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ISTS + L +++ TG + + + + +A Sbjct: 3 ISTSQFYAASLTGILNQQNTLGTLSQQLSTGSTLVNPSDQPVAAAQNVALTGQIDRLAGY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L A + S+ +V V + G + A ++ + Sbjct: 63 AQNGQNAQNSLQLESATVQSVTTLVSQARQLAVQMNNGTVSSQDLQNAAATMQGYVQQLA 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPL 148 +AN D G YLF+G S +P Sbjct: 123 QYANTQDGQGNYLFAGSKSGAQPF 146 >gi|330808202|ref|YP_004352664.1| flagellar hook-associated protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376310|gb|AEA67660.1| flagellar hook-associated protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 521 Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 1/145 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ISTS +E ++ VK EE + + + +L+ + + +++ Sbjct: 3 ISTSQFYESTAANYQKNFAKVVKTSEEASSLVRVNTAADDPVGASRLLQLGNQASMLSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + L T++A ++S+ ++Q V + A L + + Sbjct: 63 EANVTTIKATLGTTEAVMTSIGNVLQRAKELAVSAGNAAYTDADRKAVASELGSIEDQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN 149 + N D G+Y+FSG P Sbjct: 123 SLMNTKDENGKYIFSGSKGDVVPFT 147 Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats. Identities = 22/221 (9%), Positives = 63/221 (28%), Gaps = 20/221 (9%) Query: 150 GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEY 209 FT + + G + + A + + TDF + D Sbjct: 304 DTFTPARSPGNTTATQITGSQITDPVAYHASFPTGAAVLKFTSATDF-DLYAAPLNADSK 362 Query: 210 WANNWSNASDHNIKYRIKDTEGIDVSANVNMR---------------GIRDIMFVAVIGT 254 ++ + A + + ++ + N + + + T Sbjct: 363 PVSSGTLAGNVATASGVSF--TLNGAVAANDQFSIAVNTHETQNVLDTVNQLRTALNTPT 420 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 + N+ N + + G + + +G ++++ + Q+ Sbjct: 421 D--GDNIAIQKLNASLASAIGNLASGTDQLTSALSSVGGRGQSLDTQSDTNQSFVLANTQ 478 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 S + +L+ ++ S + +K+ +L + N Sbjct: 479 TQSAIRDSDAAEVMTRLTLQQTMLQASQLAFSKIAQLGLFN 519 >gi|226225743|ref|YP_002759849.1| flagellar hook-associated protein 3 [Gemmatimonas aurantiaca T-27] gi|226088934|dbj|BAH37379.1| flagellar hook-associated protein 3 [Gemmatimonas aurantiaca T-27] Length = 302 Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 37/352 (10%), Positives = 92/352 (26%), Gaps = 52/352 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ S I + + + +L +++ TG + I+ + + Sbjct: 3 VTNSIITANSKLRLQTGLQGIDRLRDDISTGVTIRKISDNATSGGEIVRIGSSMRALTQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + R + L+ + V + + + + Sbjct: 63 KRNTDSGIARAQAEEGVLNQLTNTVTRASEIALTQIGTTATAQSRLVVKAEVDQLLNLAS 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 + N +YLF G ++E PL + A SF +++ + + + + Sbjct: 123 SLGNTRFGDEYLFGGNRANEAPLFD----PAPATGSFSRLMLAGNPVDPSGNITLEVGDN 178 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 + F D + Sbjct: 179 KFVTPTH------NATQVFLDTDA------------------------------------ 196 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 + + + T + + + + S + G + + +V L Sbjct: 197 LAALRDLSTALGDND------TAAIQAATARLNTATSNVQTLIGAQGARVNEMEDAKVNL 250 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + S E A +L + + T+++ LS+ NYL Sbjct: 251 ATMEMNLKMFRSDLRDTEIDQAMVELVGKQTLYQAAMSATSRILGLSLANYL 302 >gi|167579497|ref|ZP_02372371.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis TXDOH] Length = 410 Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 72/185 (38%), Gaps = 3/185 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS+S ++ + + +L++++ +G S ++ +++ Sbjct: 3 ISSSQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++V L T L+S+ ++ ++ +G ++ A ++ S + + Sbjct: 63 TQNQTIVQTALQTESTTLTSVNDVLNAAYQSIMHAGDGGLSDSDRAALAAQIQGSRDHLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 T AN D G YLF+G + +P + + D + +++++ G + Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNK--PGGGVTYAGDYGARTVQIADTRTVSQGDNGA 180 Query: 185 VSSMN 189 M+ Sbjct: 181 SVFMS 185 >gi|152975151|ref|YP_001374668.1| flagellar hook-associated protein FlgL [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023903|gb|ABS21673.1| flagellar hook-associated protein 3 [Bacillus cytotoxicus NVH 391-98] Length = 287 Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 57/168 (33%), Gaps = 8/168 (4%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQ----SSDYGLQLGARVTSILEWEQEKNH 61 +ST L+ ++ +G+ SD L G + Sbjct: 3 VSTFQNANWAKNQLMGLSVQQQYHRNQVTSGKKNLHMSDDPLAAGKSFAIEHSLANIEQM 62 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + S ++ LS ++A L + K + + ++ + G + + Sbjct: 63 QKDLKDSKNV----LSQTEAALQGITKSLTRVDQLVLQAVNGTNGPKEMKAIGTEVNQLL 118 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGF 169 + V AN ++G+YLF G + ++P T K ++ G+ Sbjct: 119 KQVVYLANTKEQGRYLFGGESVEKQPFTEDGTYQGGNKNVTWELNDGY 166 Score = 36.6 bits (83), Expect = 5.9, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 33/79 (41%) Query: 279 QGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKI 338 Q L ++ Q LG ++ L +N + + V+ A + L+ + Sbjct: 209 QNLDKVLNQTTELGAVMNTLDTFNTILNEQNLALQENRKEIEDVDLAVAISDLAYINATY 268 Query: 339 EMSYMITTKLQKLSILNYL 357 E + + + K+SIL+Y+ Sbjct: 269 EATLKSVSTMSKISILDYM 287 >gi|83593863|ref|YP_427615.1| flagellar hook-associated protein FlgL [Rhodospirillum rubrum ATCC 11170] gi|83576777|gb|ABC23328.1| putative flagellar hook-associated protein 3 FlgL [Rhodospirillum rubrum ATCC 11170] Length = 296 Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 25/229 (10%), Positives = 59/229 (25%), Gaps = 3/229 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++TS++ + D + +G LG + + + Sbjct: 3 VATSTMSSSLITQALRNQGDYNSALNQQSSGLKDPSLNGLGGLAGTTVSLASDLKRSDHL 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + + +S + +V+ + + G D +K Sbjct: 63 VTQATTAQSEVEVAYGKVSKIADLVKTAQVAITAAISG--DVSKATGLQASAEGWLTDIA 120 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N G Y+F+G S P+ + G Sbjct: 121 AMLNTQVGGTYVFAGAGSVGAPV-DLSAYGGASSTDTSYYSGTTTPTQMMVDAEGGIEYG 179 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDV 234 + N + +K L D + + +AS + ++ Sbjct: 180 TLANDPAFANTLKALYDIANTNPPTLATLQSASTALSAATTDLGKTLET 228 >gi|34497165|ref|NP_901380.1| flagellar hook-associated protein FlgL [Chromobacterium violaceum ATCC 12472] gi|34103022|gb|AAQ59385.1| flagellar hook-associated protein 3 [Chromobacterium violaceum ATCC 12472] Length = 302 Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 119/351 (33%), Gaps = 54/351 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++ + + + + +L ++M +GQS + +L ++E+ + + Sbjct: 3 ISSNQYQSVVLLAMQNSSAGMSELLQKMSSGQSMLVPSENPIASVRLLRLQREEASLQQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + +L+ ++ L + ++D LV ++ A L +S + Sbjct: 63 RDNIGALKSQLTKNETLLDGISANLRDARDLLVAAANQPPTDD-LKAMASPLVSLRDSIL 121 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN D G+Y+FSG + + T+ + ++ ++ + + + E Sbjct: 122 YAANTKDSEGRYMFSGSAVNNAAIVVDDTQPAGSRYRYNG-----NGDRQRVTVGEGVTE 176 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 S++ + M + QL+ + + +D IR Sbjct: 177 ASNVTLESMAPLLNQLDKAIATL--------------------QSPTLDSKDPAVGATIR 216 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 ++M V L + + LG ++ + Sbjct: 217 EVMGG---------------------------VDTALDRVGGTISELGGAQNVLKTLDGN 249 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + + I + ++ TA+ ++ L ++ S K+ +L++ + Sbjct: 250 HDSLSLANQESIIELGSLDYGTAYIAMNNLSMALQTSQKAYGKVSQLTLFD 300 >gi|51246542|ref|YP_066426.1| flagellar hook-associated protein 3 (FlgL) [Desulfotalea psychrophila LSv54] gi|50877579|emb|CAG37419.1| related to flagellar hook-associated protein 3 (FlgL) [Desulfotalea psychrophila LSv54] Length = 757 Score = 46.2 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 3/148 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK T ST ++ K L+ + +G + A + +L + Sbjct: 1 MKVTNSSTY---RQLLTNINRNQKSLQNLYLQNSSGIKFNRASDNPAAILPVLSSRSQIT 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 L + +++++ L +M+ ++Q + V + + A + + Sbjct: 58 LNERFLSTLGSSADQMASTDTSLGAMENVLQRVKEISVNTINASLSQKDLNVFADEVGEL 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPL 148 + + AN +GQY+FSG + ++ P Sbjct: 118 KKQMLDTANAQVDGQYIFSGYSVTDAPF 145 Score = 40.8 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 30/70 (42%) Query: 288 RAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTK 347 R+ LG+ I + + + + +S+ + L +E + ++ K Sbjct: 688 RSQLGVKASRIAQSTDQREGFLIDVKSTLSRYEDADMIKTLNDLMLQSTALEAALSVSGK 747 Query: 348 LQKLSILNYL 357 + KLSILNYL Sbjct: 748 ISKLSILNYL 757 >gi|225569937|ref|ZP_03778962.1| hypothetical protein CLOHYLEM_06032 [Clostridium hylemonae DSM 15053] gi|225161407|gb|EEG74026.1| hypothetical protein CLOHYLEM_06032 [Clostridium hylemonae DSM 15053] Length = 332 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 100/352 (28%), Gaps = 24/352 (6%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+T+ I + + TG+ + + E + Sbjct: 4 ITTNMIRRNYQNNLNSTLSGLEQARRQAETGRRFSKSYEDPSAAAKATILENRYARNGDY 63 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 ++ K T + L + KI +++ + T+ + A R+ +S + Sbjct: 64 RNAVEDTMKWQDTQEDVLMQLGKIAEEVNKNYGVEAVSGTNASVRDTYAATFREMQKSMI 123 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N + +G + P K+ +G + + A + L Sbjct: 124 YALNTKYGDTFAMAGSDGQNAPFE--------LKEDGTVTYRGLDVNDPANTDALKALSR 175 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 +I D S + + + + Sbjct: 176 E-------HSYIDLGFGLTFDGGG-----EIVSSSAFDAAFPGIKAVGFGQSDDGTSNNI 223 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFL 305 I+ + + N + A L + +G + +G K ++ + L Sbjct: 224 IVLMGQMADVLEEDNFDEAAYKKLWTQ----FDKGAGDLQNCLTEIGTKTKLLSSTKDRL 279 Query: 306 QNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +N+ I T ++ + + A S ++ I T L S+L+++ Sbjct: 280 ENEKLNITTQFDSTVNINEAEALMNFSYAQYVYNVALKIGTSLLSNSLLDFM 331 >gi|91785626|ref|YP_560832.1| flagellar hook-associated protein FlgL [Burkholderia xenovorans LB400] gi|91689580|gb|ABE32780.1| Flagellar hook-associated protein [Burkholderia xenovorans LB400] Length = 407 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 48/404 (11%), Positives = 124/404 (30%), Gaps = 52/404 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++ F + +L+ E+ +G S ++ +++ Sbjct: 3 ISSTQYFNMNVATMSDQQAQLSQLYAEISSGVSLSTPSDNPLGAAQAVQLSSTATTLSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L L S+ ++Q + ++ +G ++ A L+ + Sbjct: 63 TTNQGTALASLQQEDTTLGSVNTVLQTIHTLVLRAGDGSLNDGDRGSIATQLQSLRSQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTK----------------DSLAKKSFDQMLQG 168 T AN TD +G YLF+G SS +P DS ++ D + Sbjct: 123 TLANSTDPQGNYLFAGYQSSAQPYTTNSAGVVTYSGDTGTPAVQITDSHVVQTGDNGISI 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKD 228 F A + ++ ++ + ++ N+S+A+ + + Sbjct: 183 FGSVAPIGTSAVPAATTGNTGTGVISSVSLNNPTDPTNADKYSINFSSATTYTVSQTDPA 242 Query: 229 TEGIDVS-----------------------------------ANVNMRGIRDIMFVAVIG 253 T + S +M ++ + Sbjct: 243 TGAVTTSAPQAFTAGSAITLGGQSVTITGAPNAGDSFTVTPATQGSMDVFANLSQLITTL 302 Query: 254 TEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 +S + + ++ ++ ++ ++ +A +G E+ + + Q Sbjct: 303 QTPVSGGASTASFQSALTTSMAQLENTMNNVVTAQAAVGGREQEVQALQTVTQTNTLQTS 362 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ + + + ++ + K+Q +S+ YL Sbjct: 363 SNLADLTQTDMVKTIGKYTMTQAALQAAQQAFAKIQNISLFQYL 406 >gi|291613045|ref|YP_003523202.1| flagellar hook-associated protein 3 [Sideroxydans lithotrophicus ES-1] gi|291583157|gb|ADE10815.1| flagellar hook-associated protein 3 [Sideroxydans lithotrophicus ES-1] Length = 408 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 55/146 (37%), Gaps = 4/146 (2%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTG-QSSDYGLQLGARVTSILEWEQEKNHIAE 64 ISTSSI+ L + +++ +G + D + +E + + Sbjct: 3 ISTSSIYNANISSLDTLQVQIAQTTQQISSGQRILDPSMD-PVGAARAIELTLSNSTNTQ 61 Query: 65 RLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKT-DNNKFPINAGMLRDSYES 123 +N+ T LS S L S+ ++Q V G + + A L+ Sbjct: 62 YGANNTAATNSLSLSDGILQSVTSLLQSAHDTAVTGAGGNSLSDTNRKALATDLQGRLND 121 Query: 124 FVTFANMTD-EGQYLFSGINSSEKPL 148 + AN TD G YL+SG S +P Sbjct: 122 LLGLANSTDGNGNYLYSGAQGSVQPF 147 >gi|187925753|ref|YP_001897395.1| flagellar hook-associated protein FlgL [Burkholderia phytofirmans PsJN] gi|187716947|gb|ACD18171.1| flagellar hook-associated protein 3 [Burkholderia phytofirmans PsJN] Length = 407 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 51/405 (12%), Positives = 124/405 (30%), Gaps = 54/405 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++ F + +L+ E+ +G S ++ +++ Sbjct: 3 ISSTQYFNMNVATMSDQQAQLSQLYAEISSGVSLSTPSDNPLGAAQAVQLSSTATTLSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L L S+ ++Q + ++ +G ++ A L+ + Sbjct: 63 TTNQGTALASLQQEDTTLGSVNTVLQTIHTLVLRAGDGSLNDGDRGSIATQLQSLRSQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTK----------------DSLAKKSFDQMLQG 168 T AN TD +G YLF+G SS +P DS ++ D + Sbjct: 123 TLANSTDPQGNYLFAGYQSSAQPYTTNSAGVVTYSGDTGTPGVQVTDSHVVQTGDNGIAI 182 Query: 169 FLEENSKSLLAGQHLEVSSM-NAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIK 227 F A + + D + D+Y + N+S+A+ + + Sbjct: 183 FGSVAPIGTSAVPAATTGNTGTGVISQVSLTNPTDPTNADKY-SINFSSATTYTVSQTDP 241 Query: 228 DTEGIDVS-----------------------------------ANVNMRGIRDIMFVAVI 252 T + S +M ++ + Sbjct: 242 ATGAVTTSAPQAFTAGSAITLGGQSVSITGAPNAGDSFSVTPATQGSMDVFANLSQLITT 301 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 +S + + ++ ++ ++ ++ +A +G E+ + + Q Sbjct: 302 LQTPVSGGASTASFQSALTTSMTQLENTMNNVVTAQAAVGGREQEVQALQTVTQTNTLQT 361 Query: 313 DTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ + + + ++ + K+Q +S+ YL Sbjct: 362 SSNLADLTQTDMVKTIGKYTMTQAALQAAQQAFAKIQNISLFQYL 406 >gi|300722674|ref|YP_003711964.1| flagellar hook-filament junction protein [Xenorhabdus nematophila ATCC 19061] gi|297629181|emb|CBJ89777.1| flagellar biosynthesis; hook-filament junction protein [Xenorhabdus nematophila ATCC 19061] Length = 322 Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 120/353 (33%), Gaps = 43/353 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 +ST+ ++ + +K E++ +G+ SD L + + Q ++ Sbjct: 3 VSTNQLYTQKMNGVFSAQSKWMKSGEQLSSGRRVINPSDDPLA----ASQNIMVSQSESK 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + +S + SSM ++ ++ LV + ++D ++ L Sbjct: 59 NQQFATARIFAKNAMSAQLSITSSMVEVTNNVFETLVAAADEQSDQDRESYAQQ-LDGFK 117 Query: 122 ESFVTFAN-MTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + + N G+Y+F+G + + P ++ ++ + +++N ++A Sbjct: 118 QQLLNLGNKTDGNGRYIFAGYKTDKPPFVADKNSGKVSYVGGEESITQKVDDNRSMIIAH 177 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 E F+ Q + + SD + + + ID++ Sbjct: 178 TGREA----------FLSQPSNPIKEPN---------SDTPSESDVFAS--IDMAIKALK 216 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 ++ + A L K ++ L+ AVLG+ + + + Sbjct: 217 TPY-----------SSATEEQKNEAME-LMNKANRGIRNSLNNFSSVEAVLGLQLQELEQ 264 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ + + V+ ++ ++ S+ T L+ +S+ Sbjct: 265 LDSLGSERSISNKVRSGELVDVDWTATISEYYQQQAALQASFKAFTDLKGMSL 317 >gi|297618068|ref|YP_003703227.1| flagellar hook-associated protein 3 [Syntrophothermus lipocalidus DSM 12680] gi|297145905|gb|ADI02662.1| flagellar hook-associated protein 3 [Syntrophothermus lipocalidus DSM 12680] Length = 294 Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 32/75 (42%) Query: 76 LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQ 135 L+T+ + L ++ I+Q + L G A +R + AN T + Sbjct: 73 LNTTDSALGNITDILQRANELTIQGLNGTNSEASREAIAKEVRQLADQIGVIANTTYGSK 132 Query: 136 YLFSGINSSEKPLNG 150 ++F+G N +E P G Sbjct: 133 HVFAGTNVTEAPFTG 147 >gi|302390138|ref|YP_003825959.1| flagellar hook-associated protein 3 [Thermosediminibacter oceani DSM 16646] gi|302200766|gb|ADL08336.1| flagellar hook-associated protein 3 [Thermosediminibacter oceani DSM 16646] Length = 294 Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 70/225 (31%), Gaps = 8/225 (3%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ S I E + + K + + +G+ T + + + Sbjct: 3 VTQSMITEAFIRNLSQNLRRLGKKEDMLASGKKVRLPSDDPVSATLAMRLRDTLLTVEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L +++ L++ +I+Q + V + + + + Sbjct: 63 TKNTEDAITWLKSTETALANTGEILQRIRELTVYAANDTLSAEEREMVLDEITQLKHQLL 122 Query: 126 TFANMTDEGQYLFSGINSSEKPL----NGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 AN + +YLF+G ++ + P K S+A G +++ Sbjct: 123 QEANASHNKKYLFNGYHTDQAPFYIDAMDGKIKPSVATSETVDYNIGRSNSIQVNVMGND 182 Query: 182 HLEVSSMNAQQM-TDFIKQLEDKFSDDEYWANNWSNASDHNIKYR 225 + + + D + S + NA D +KYR Sbjct: 183 VFTDIFLTVEDIEQDLLNNDSASLSGR---LDQLDNAIDTVLKYR 224 Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 55/148 (37%), Gaps = 8/148 (5%) Query: 216 NASDHNIKYRIKDTEGID------VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVL 269 +A D IK + +E +D S VN+ G + + + L + + Sbjct: 148 DAMDGKIKPSVATSETVDYNIGRSNSIQVNVMGNDVFTDIFLTVEDIEQDLLNND--SAS 205 Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 L + + +++ R+ +G + + L+ N +SK+ V+ Sbjct: 206 LSGRLDQLDNAIDTVLKYRSQIGARINRLEATKTRLEYNNIDYTELLSKTEDVDVAKLIM 265 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 L N S + ++ + +++++L Sbjct: 266 DLKMEENVYRASLAVGARIIQPTLVDFL 293 >gi|67641546|ref|ZP_00440323.1| flagellar hook-associated protein 3 [Burkholderia mallei GB8 horse 4] gi|238522497|gb|EEP85941.1| flagellar hook-associated protein 3 [Burkholderia mallei GB8 horse 4] Length = 397 Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 70/178 (39%), Gaps = 3/178 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++ ++ + + +L++++ +G S ++ +A+ Sbjct: 3 ISSTQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++V L T L+S+ ++ L+ +G ++ A ++ S + + Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 T AN D G YLF+G + +P + + D + +++++ G + Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNK--PGGGVTYAGDYGARAVQIADTRTVSQGDN 178 >gi|134297190|ref|YP_001120925.1| flagellar hook-associated protein FlgL [Burkholderia vietnamiensis G4] gi|134140347|gb|ABO56090.1| flagellar hook-associated protein 3 [Burkholderia vietnamiensis G4] Length = 413 Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 55/409 (13%), Positives = 117/409 (28%), Gaps = 57/409 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++ F+ + +L++++ +G S ++ +++ Sbjct: 3 ISSAQFFQLNVSQMNDQQAQLSQLYQQIASGVSLQTPADNPVGAAQAVQLSMTSATLSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S L L S+ ++ + V +G ++ A L+ + + Sbjct: 63 TANQSTALASLQAEDQTLQSVSTVLTGVQTLTVRAGDGSLADSDRAALATQLQGYRDQLM 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGY----------------FTKDSLAKKSFDQMLQG 168 T AN D G YLF+G+N+S P DS + D Sbjct: 123 TLANTNDGAGTYLFAGVNNSSAPFTSSPNGTVSYVGDSGTRQVQIGDSSSVAQGDTGAAV 182 Query: 169 FLEENSKSLLAGQHLEVSSM-------------NAQQMTDFIKQLEDKFSDDEYWANNWS 215 F+ S + + ++ +A + S Sbjct: 183 FMSVQSLGSVPVPAADAANTGTGRITAVTVTSPSAATNGHHFAITFGGTPAAPTYTVTDS 242 Query: 216 NASDHNIK--------YRIKDTEGIDVSANVNMRGIRDIM-------------------F 248 +A I G+ VS + Sbjct: 243 SAKPPTTTPAQAYTAGASIALGGGMTVSVSGTPSAGDSFSVTPGPQATGGADIFSTLDSM 302 Query: 249 VAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNK 308 +A + T + A + V + + +A +G E+ + + Q Sbjct: 303 IAALKTPVTGNPVAAAALSNAMMTGSIKVGNTMRNVTTIQASVGGREQEVKAMQAVTQTA 362 Query: 309 NNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + ++ G T +Q + N + + +LQ LS+ Y+ Sbjct: 363 SLQTTSNLTDLTGTNMVTTISQYLQVQNALTGAQKAYVQLQNLSLFQYV 411 >gi|242238976|ref|YP_002987157.1| flagellar hook-associated protein 3 [Dickeya dadantii Ech703] gi|242131033|gb|ACS85335.1| flagellar hook-associated protein 3 [Dickeya dadantii Ech703] Length = 312 Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 89/310 (28%), Gaps = 55/310 (17%) Query: 50 TSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNK 109 + Q + A+ S S + L L + ++Q++ +V + + Sbjct: 47 AQAVILAQTQASSAQYATSRSSASNSLKLETTTLDQVTDVIQNIQTLIVEAGDTTYSDTD 106 Query: 110 FPINAGMLRDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQML 166 L+ + + AN TD G Y+F+G + P + T D D + Sbjct: 107 RQSLKTELQGYKDQLLGLANSTDSNGNYIFAGYKTDTAPFSEDTTSDPSVISYVGSDTAI 166 Query: 167 QGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRI 226 ++ + + +V + + + L+ I Sbjct: 167 SQKVDASRTMTVGDTGDDVFGDIFTHINNVLDALD------------------------I 202 Query: 227 KDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIE 286 + N + + L G++ Sbjct: 203 SLDDT-------------------------NGDNTNMDTYTAALGTATTGMSDSLDGVLT 237 Query: 287 QRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQ---HTAHAQLSTLINKIEMSYM 343 +A +G ++ +K+ I ++ G + + A+ + ++ +Y Sbjct: 238 IQASVGSKINELDTLDSAGDSKDLIYSDLMTSLKGADATDWYDIIAENTLRKATLQAAYT 297 Query: 344 ITTKLQKLSI 353 + +Q LS+ Sbjct: 298 AFSSMQSLSL 307 >gi|119715017|ref|YP_921982.1| flagellar hook-associated protein 3 [Nocardioides sp. JS614] gi|119535678|gb|ABL80295.1| flagellar hook-associated protein 3 [Nocardioides sp. JS614] Length = 305 Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 39/351 (11%), Positives = 94/351 (26%), Gaps = 54/351 (15%) Query: 8 TSSIFERMNILTKE-LNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 T + R + + + E++ TG+ + TS + + + + Sbjct: 7 TQGMMSRQALTGMQAGLNRLANVQEQLSTGRVINRPSDDPTGATSAMRLRSSVSDQKQYV 66 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + L+ + LSS+ + + L+G + L + + Sbjct: 67 RNADNGLGWLNQIDSTLSSITD---QVRRAHEVALQGANTGSLGAEAREALAIEIDQIRS 123 Query: 127 FANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS 186 T YL E+P+ G T S A + + G + +L G+ V Sbjct: 124 GLVSTANATYL-------ERPVFGGVTAGSAAYA--EDPVTGAVTYLPGALTTGEG--VV 172 Query: 187 SMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI 246 + + + Sbjct: 173 RVVGAGAKVRVDVEGPDVFGPDG------------------------------------- 195 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 +V + + +A +G+ K + + R Sbjct: 196 --DSVFDHLTALAAALRAGDAAAITASAGILDADTRKVTNVQADIGVRTKRVEQARTAAN 253 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + + +S+ + A L + + T ++ + S+L++L Sbjct: 254 DADLRLTSSLSEVENTDMVKATVDLQLQEVAYQAALSATARVMQPSLLDFL 304 >gi|304413324|ref|ZP_07394797.1| flagellar hook-filament junction protein [Candidatus Regiella insecticola LSR1] gi|304284167|gb|EFL92560.1| flagellar hook-filament junction protein [Candidatus Regiella insecticola LSR1] Length = 307 Score = 45.5 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 20/152 (13%), Positives = 52/152 (34%), Gaps = 1/152 (0%) Query: 11 IFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNS 70 I M + K+ + +++ + + + E+E + N Sbjct: 8 IENGMRNPIAVIQKEINRTSKQIENEKQVNCPSENPIASAYNTLIEREIKQLGSYKKINQ 67 Query: 71 LVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANM 130 +T S+ + + +++ + + L+++ + L + E ++ N Sbjct: 68 HLTSSFSSQKNSMGNIEDTLNRIKDILLLVANDVHSTEDRRVFGQKLAGNIERIMSSLNA 127 Query: 131 -TDEGQYLFSGINSSEKPLNGYFTKDSLAKKS 161 +E YLF+G S+E+ + S Sbjct: 128 QNEERNYLFAGTKSNEQAVKESSGSYSDNGNQ 159 >gi|62006048|dbj|BAC97967.3| mKIAA0533 protein [Mus musculus] Length = 1702 Score = 45.5 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 40/315 (12%), Positives = 93/315 (29%), Gaps = 51/315 (16%) Query: 44 QLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEG 103 QL + +++ + N + R +Q L + Q++ L Sbjct: 465 QLAQYESGLMDLREALNQAVNTTREAEELNSR---NQERLKEALQWKQELSQDNATLKAT 521 Query: 104 KTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFD 163 + + L + ++L + ++ + PL S A D Sbjct: 522 LQAASLILGHVSELLQGIDQAKEDL------EHLAASLDGAWTPLLKRMQAFSPASSKVD 575 Query: 164 QMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIK 223 + + LA + + FI++ + SNA + Sbjct: 576 LVEAAEAHAQKLNQLAINLSGI--ILGINQDRFIQRAVEA-----------SNAYSSIL- 621 Query: 224 YRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSG 283 + + + + + +R + + + L GAR +L L Sbjct: 622 ------QAVQAAEDAAGQALRQASRTWEMVVQ---RGLAAGARQLLAN------SSALEE 666 Query: 284 -IIEQRAVLGISEKNINEERVFLQ---NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIE 339 I+ + LG+++ + + L + N + I + A + T Sbjct: 667 TILGHQGRLGLAQGRLQAAGIQLHNVWARKNQLAAQIQE------AQAMLAMDTSETSEH 720 Query: 340 MSYMITT---KLQKL 351 S ++ +++KL Sbjct: 721 ASLALSANIGRVRKL 735 >gi|271500073|ref|YP_003333098.1| flagellar hook-associated protein 3 [Dickeya dadantii Ech586] gi|270343628|gb|ACZ76393.1| flagellar hook-associated protein 3 [Dickeya dadantii Ech586] Length = 309 Score = 45.5 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 38/349 (10%), Positives = 111/349 (31%), Gaps = 48/349 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS IF++ + + K +++ + + + Q + + Sbjct: 3 LSTSIIFQQSMQGVTDGLSNFSKTGQQLASNTRVVNPSDDPIAASKAVMVNQAQAQNDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + +++ + L+++ + L+ K DN++ + A LR + Sbjct: 63 SLARTFAENGMNSELSVLTNVATALTSASTTLLSADGTKNDNDR-QLIATSLRGLKAQLL 121 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N TD G ++F G + +P +++ +Q + ++ + + + Sbjct: 122 NLGNSTDGNGNFIFGGYKTDAQPFTT-NAAGTVSYVGGNQAISQQVDADRVMTVGHVGSD 180 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V + + F +D + + + Sbjct: 181 VFNNASGTADIF---------------------------------GALDTAISALETPLE 207 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + A +++ L+ + +A LG+ + ++ Sbjct: 208 ------------GATDAVKAANTASINAASQSLKNALTNVSSAQATLGVQLQEVDTLNSI 255 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 +++N +S + ++ + ++ SY + +Q LS+ Sbjct: 256 GTDRSNANKQTLSDLVDIDMVATISTYMMQQQSLQASYKAFSDMQGLSL 304 >gi|258592551|emb|CBE68860.1| putative Flagellar hook-associated protein 3 [NC10 bacterium 'Dutch sediment'] Length = 307 Score = 45.5 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 36/88 (40%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + L+ ++ + + A +G I + + QN + +SK + A Sbjct: 219 VEASLTDLEAAIDQVRVVSADVGSRIGRIRDIQARSQNDLLALRGRLSKIEDTDVAEASI 278 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 + N + + +++ ++++L++L Sbjct: 279 EFQQAQNVYQAALAAASRVGQINLLDFL 306 >gi|222099584|ref|YP_002534152.1| Flagellar hook-associated protein 3 [Thermotoga neapolitana DSM 4359] gi|221571974|gb|ACM22786.1| Flagellar hook-associated protein 3 [Thermotoga neapolitana DSM 4359] Length = 304 Score = 45.5 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 117/359 (32%), Gaps = 65/359 (18%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTG---QSSDYGLQLGARVTSILEWEQEKNHI 62 ++ I +R+ + K KLH+++ +G + + R + I+ +E Sbjct: 3 VTNKMISDRVLFNIQTSLKRIAKLHDQLSSGYRVRYPSDDAVVAKRASDIMTRRRELKQF 62 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + V ++ + L ++ I Q + LV G + A + + Sbjct: 63 QRNIDH---VQTYVNAYDSALQTVSAISQRLRELLVRAANGTLSKAEREAIAEEIDRIRD 119 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPL----NGYFTKDSLAKKSFDQMLQGFLEENSKSLL 178 + V AN +Y+FSG + +P+ N + S + + + Sbjct: 120 NLVEIANTRIGNEYIFSGYDVFSEPVKYENNAWKIVTSPS-----------ANRSRSVSV 168 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 G+ +E + A ++ DE SN D I I + Sbjct: 169 LGRSIEY-GVTAGEIFKLGDGRNVFQVLDEVSGLLRSNLDDSAISSHISN---------- 217 Query: 239 NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 ++ K LS ++ ++ + +G + I Sbjct: 218 ------------------------------ISLKDLSFFEENITKVT---GKVGGVSRFI 244 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +++ + Y+SK + L+ + +E + +++ + ++++++ Sbjct: 245 EMVEKRIEDLDYFFTEYLSKERDADITELVTDLAMQQSVLEAALKSASRVLQATLVDFV 303 >gi|153954737|ref|YP_001395502.1| FlgL [Clostridium kluyveri DSM 555] gi|219855201|ref|YP_002472323.1| hypothetical protein CKR_1858 [Clostridium kluyveri NBRC 12016] gi|146347595|gb|EDK34131.1| FlgL [Clostridium kluyveri DSM 555] gi|219568925|dbj|BAH06909.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 476 Score = 45.5 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 27/236 (11%), Positives = 70/236 (29%), Gaps = 11/236 (4%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + K+ + K+ ++ + ++ V ++ ++ Sbjct: 3 ITNKYLTNSFLSDMKKNLNNLNKIQGQLSSTKNFSKPSDDPLNVQKSMQLNTSITANSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + T+ L + ++ ++ LV + + Sbjct: 63 GTNIKTALTWMDTTDVTLGQIGTVLGNIRDNLVKAGNVTYGQDDRDKINDEVNQQVSQLA 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N G+Y+F G KP+ + + +++ + + Sbjct: 123 QLLNTNLGGEYIFGGTQGLSKPVTTETYS-----------ITRQVTDDNGNTTTDIYEGC 171 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 S+ + + + D++ NNW+ S D+ G D S +VN Sbjct: 172 ISLKYADKDGSVLEALPQVVSDDFNVNNWTGKSITFNVKGSSDSTGTDYSLSVNSS 227 >gi|258622495|ref|ZP_05717517.1| flagellar hook-associated protein 3 [Vibrio mimicus VM573] gi|258585195|gb|EEW09922.1| flagellar hook-associated protein 3 [Vibrio mimicus VM573] Length = 299 Score = 45.5 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 116/355 (32%), Gaps = 65/355 (18%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTG----QSSDYGLQLGARVTSILEWEQEKNH 61 IS + + M + N + ++M TG + SD + +L+ ++E + Sbjct: 3 ISDTQFSQMMLQSLQTNNAGLGNVMQQMSTGERLTKLSDDPMA----SVKLLKLDREGSA 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + ++V LS + HL S+ + ++ M ++ G + L+ Sbjct: 59 IKQYQDNINMVKTTLSNQEVHLDSVSESLKSMRELVLWGANGTLTDEDRDGMISKLKSLR 118 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 S + N D +G YLFSG + L+ K + G ++ ++ G Sbjct: 119 GSIASSFNARDEDGHYLFSGTKTDTAALD---------KTDAGYVFNGNNDKRVVTVAKG 169 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +E S+M A+ + D +N+ +I Sbjct: 170 VTVE-SNMTAKDILDLGGG--------------------NNVLNQID------------- 195 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 V+ EF L + L+ ++ +G N++ Sbjct: 196 ----------VLIKEFEKPGKN---FKAKVGSSLKAIDDSLANVLGALTEIGGRYNNLDL 242 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 +D ++ A +LS + ++ + K+ L++ + Sbjct: 243 MESAHSENKLFVDKVTGDLSMLDYGEASVRLSNFMAALQATQASYVKINDLNLFD 297 >gi|148675372|gb|EDL07319.1| mCG6728, isoform CRA_a [Mus musculus] Length = 3635 Score = 45.5 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 96/319 (30%), Gaps = 49/319 (15%) Query: 44 QLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEG 103 QL + +++ + N + R +Q L + Q++ L Sbjct: 2292 QLAQYESGLMDLREALNQAVNTTREAEELNSR---NQERLKEALQWKQELSQDNATLKAT 2348 Query: 104 KTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFD 163 + + L + ++L + ++ + PL S A D Sbjct: 2349 LQAASLILGHVSELLQGIDQAKEDL------EHLAASLDGAWTPLLKRMQAFSPASSKVD 2402 Query: 164 QMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIK 223 + + LA + + FI++ + SNA + Sbjct: 2403 LVEAAEAHAQKLNQLAINLSGI--ILGINQDRFIQRAVEA-----------SNAYSSIL- 2448 Query: 224 YRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSG 283 + + + + + +R + + + L GAR +L L Sbjct: 2449 ------QAVQAAEDAAGQALRQASRTWEMVVQ---RGLAAGARQLLAN------SSALEE 2493 Query: 284 -IIEQRAVLGISEKNINEERVFLQ---NKNNIIDTYISK---SIGVEQHTAHAQL----S 332 I+ + LG+++ + + L + N + I + + ++ ++ + Sbjct: 2494 TILGHQGRLGLAQGRLQAAGIQLHNVWARKNQLAAQIQEAQAMLAMDTSETSEKIAHAKA 2553 Query: 333 TLINKIEMSYMITTKLQKL 351 + + + ++LQ + Sbjct: 2554 VAAEALSTATHVQSQLQGM 2572 >gi|148675373|gb|EDL07320.1| mCG6728, isoform CRA_b [Mus musculus] Length = 3714 Score = 45.5 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 96/319 (30%), Gaps = 49/319 (15%) Query: 44 QLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEG 103 QL + +++ + N + R +Q L + Q++ L Sbjct: 2371 QLAQYESGLMDLREALNQAVNTTREAEELNSR---NQERLKEALQWKQELSQDNATLKAT 2427 Query: 104 KTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFD 163 + + L + ++L + ++ + PL S A D Sbjct: 2428 LQAASLILGHVSELLQGIDQAKEDL------EHLAASLDGAWTPLLKRMQAFSPASSKVD 2481 Query: 164 QMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIK 223 + + LA + + FI++ + SNA + Sbjct: 2482 LVEAAEAHAQKLNQLAINLSGI--ILGINQDRFIQRAVEA-----------SNAYSSIL- 2527 Query: 224 YRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSG 283 + + + + + +R + + + L GAR +L L Sbjct: 2528 ------QAVQAAEDAAGQALRQASRTWEMVVQ---RGLAAGARQLLAN------SSALEE 2572 Query: 284 -IIEQRAVLGISEKNINEERVFLQ---NKNNIIDTYISK---SIGVEQHTAHAQL----S 332 I+ + LG+++ + + L + N + I + + ++ ++ + Sbjct: 2573 TILGHQGRLGLAQGRLQAAGIQLHNVWARKNQLAAQIQEAQAMLAMDTSETSEKIAHAKA 2632 Query: 333 TLINKIEMSYMITTKLQKL 351 + + + ++LQ + Sbjct: 2633 VAAEALSTATHVQSQLQGM 2651 >gi|124487155|ref|NP_001074640.1| laminin subunit alpha-5 precursor [Mus musculus] gi|123283981|emb|CAM16215.1| laminin, alpha 5 [Mus musculus] Length = 3718 Score = 45.5 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 96/319 (30%), Gaps = 49/319 (15%) Query: 44 QLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEG 103 QL + +++ + N + R +Q L + Q++ L Sbjct: 2375 QLAQYESGLMDLREALNQAVNTTREAEELNSR---NQERLKEALQWKQELSQDNATLKAT 2431 Query: 104 KTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFD 163 + + L + ++L + ++ + PL S A D Sbjct: 2432 LQAASLILGHVSELLQGIDQAKEDL------EHLAASLDGAWTPLLKRMQAFSPASSKVD 2485 Query: 164 QMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIK 223 + + LA + + FI++ + SNA + Sbjct: 2486 LVEAAEAHAQKLNQLAINLSGI--ILGINQDRFIQRAVEA-----------SNAYSSIL- 2531 Query: 224 YRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSG 283 + + + + + +R + + + L GAR +L L Sbjct: 2532 ------QAVQAAEDAAGQALRQASRTWEMVVQ---RGLAAGARQLLAN------SSALEE 2576 Query: 284 -IIEQRAVLGISEKNINEERVFLQ---NKNNIIDTYISK---SIGVEQHTAHAQL----S 332 I+ + LG+++ + + L + N + I + + ++ ++ + Sbjct: 2577 TILGHQGRLGLAQGRLQAAGIQLHNVWARKNQLAAQIQEAQAMLAMDTSETSEKIAHAKA 2636 Query: 333 TLINKIEMSYMITTKLQKL 351 + + + ++LQ + Sbjct: 2637 VAAEALSTATHVQSQLQGM 2655 >gi|229029419|ref|ZP_04185502.1| Flagellar hook-associated protein 3 [Bacillus cereus AH1271] gi|228731878|gb|EEL82777.1| Flagellar hook-associated protein 3 [Bacillus cereus AH1271] Length = 287 Score = 45.5 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 27/204 (13%), Positives = 66/204 (32%), Gaps = 2/204 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS ++ LS + K + + L G + + + V Sbjct: 63 QKDIADSKNVLSQTETTLSGIVKSLTRADQLTIQALNGPNGEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN ++G+YLF G ++ + P T K ++ G+ + ++ + Sbjct: 123 YLANTKEQGRYLFGGDSAEKPPFADDGTYQGGEKDVMWKLNDGYEIKAFRNGENLLTPVI 182 Query: 186 SSMN--AQQMTDFIKQLEDKFSDD 207 ++ M ++ F + Sbjct: 183 QTLVKMKDAMQSGDQKALQPFLAE 206 >gi|291531968|emb|CBK97553.1| Flagellin and related hook-associated proteins [Eubacterium siraeum 70/3] Length = 331 Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 37/351 (10%), Positives = 103/351 (29%), Gaps = 25/351 (7%) Query: 8 TSSIFERMNILTKELNKDSVKLHE-EMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 T S+ R + + E ++ + + + + L + ++ + L Sbjct: 4 TQSMTNRRYMSQLNAALERKNASERKINSTKRYNRASEDPISAAKALRTRKAISNTNDYL 63 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + + + + L ++ I+ +++ + G + I A + + V Sbjct: 64 GNLETAEQIYNGADSVLMNVNDILDNIIEKVTYAANGTQHDEDEEILAQTVETFADEIVR 123 Query: 127 FANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS 186 N + +F G+N+ + +++ KK+ + + Sbjct: 124 LFNTDIAERRIFGGVNNDT---TVFKIENAGGKKTITYNGVDINSIDDPDKFPYSESSFT 180 Query: 187 SMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI 246 + + D D S ++ A +I D + N Sbjct: 181 DIGTGMVIDPATGRVDPQSALP---VTFNGA-------KITGCGKDDEGDSKN------- 223 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 +I + + + ++ + + A +G ++ I + L Sbjct: 224 ----IIQITLDAAQAVREGDKIKAMDYIDKLRAAQTSVSVAHADIGNKQEYIEYNKNRLT 279 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 N + + G + TL +S + + +SI ++ Sbjct: 280 NNMETLLEQQNNLEGTDMGAETTNWKTLDAIYNVSLQFASSVIPMSIFQFI 330 >gi|312115290|ref|YP_004012886.1| flagellin domain protein [Rhodomicrobium vannielii ATCC 17100] gi|311220419|gb|ADP71787.1| flagellin domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 321 Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 39/336 (11%), Positives = 90/336 (26%), Gaps = 37/336 (11%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T++ + + K K E+ TG + + + + + + Sbjct: 2 TSILTNNAANTALLNLQNTVKSLDKTQNEISTGLRVSTAADNASYYSIATSLKSDSSALT 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 S + L+T+ + + + ++ + LV D K + ++ Sbjct: 62 TISDSLDVADSTLATATSAIDEISDVLSKIKDSLVTATTQGADRTKIQSEIATYQAQLKT 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A + GQ N S + L +S ++ + Sbjct: 122 ISEAA--SLNGQ-------------NFLSVDSSATGYNDTASFVASLSRSSDGSVSYGTI 166 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 S + + D + Sbjct: 167 TFS------------KTDTALFDSNGDIGILDKVDSTTTGSFTNADGTTATATADGKSVF 214 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + +GA + V+ + + +VLG ++ I ++ Sbjct: 215 NLDISALT----------DEGADLAMINAYQKQVEAAIKSVTAASSVLGSTQSRIESQKD 264 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIE 339 F+ +D +S + + + A +LS L + E Sbjct: 265 FVDTLKTSVDAGVSSLVDADMNEASTRLSALQVQQE 300 >gi|317482618|ref|ZP_07941632.1| YhgE/Pip domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|316915864|gb|EFV37272.1| YhgE/Pip domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] Length = 909 Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 73/265 (27%), Gaps = 12/265 (4%) Query: 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114 K A + + S L+ Q Q LV L + + + A Sbjct: 228 LADAKQTTASLKQTVAAAQNASRQSGTLLAETQAGSQAFSTTLVGAL--DSSSAQLSGLA 285 Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENS 174 + ++ S N N+ PLN T S K + + G + Sbjct: 286 VHVNNAAGSITGSFNSAQNSVDTI--TNTLSAPLNATQTSISDLKDALTKAGIGKDTTDP 343 Query: 175 KSLLAGQHLEV--SSMNAQ--QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 + ++ S ++ Q Q+ F + + N S A + I Sbjct: 344 VGQNIWKQIDALDSLISKQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIAALN 403 Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEF-LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRA 289 S + + + + T + + + Q + + + + Sbjct: 404 TARGSLT--GTVMPSLTSSLNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKT 461 Query: 290 VLGISEKNINE-ERVFLQNKNNIID 313 + ++ ++ + + +I Sbjct: 462 TISSTQDSLRQVASDVATVRTDIAT 486 >gi|89100619|ref|ZP_01173477.1| flagellar hook-associated protein L [Bacillus sp. NRRL B-14911] gi|89084643|gb|EAR63786.1| flagellar hook-associated protein L [Bacillus sp. NRRL B-14911] Length = 276 Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 37/84 (44%) Query: 274 LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLST 333 L V + + ++ RA +G + I LQ + +S + V+ +++T Sbjct: 192 LEKVDKYIDQMLAGRAKIGAKQNRIELMDDRLQQQEVFSTRILSDNEDVDMEKVIMEMTT 251 Query: 334 LINKIEMSYMITTKLQKLSILNYL 357 + + I +++ + S++++L Sbjct: 252 QESVHRAALSIGSRIIQPSLMDFL 275 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 15/122 (12%), Positives = 41/122 (33%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 KL +++ T + + + + N I + + + ++ + Sbjct: 12 LGKLQDQIATQKKFTKPSDDPVSAMMAMNYRTDLNRIEQYQRNIGEAKNWIDSTDDAMDK 71 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 +Q + V G + ++ ++ E + G+Y+F+G ++ Sbjct: 72 GIMALQRIRELTVQASNGTLEGDQKKNIMEEIKQLKEHLIDIGETQVGGKYIFNGTQTNV 131 Query: 146 KP 147 KP Sbjct: 132 KP 133 >gi|94265699|ref|ZP_01289438.1| Flagellin-like:Flagellin hook IN [delta proteobacterium MLMS-1] gi|93453785|gb|EAT04157.1| Flagellin-like:Flagellin hook IN [delta proteobacterium MLMS-1] Length = 1004 Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 54/139 (38%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ SI+ + LNKD ++++++ +G+ D + + L + I + Sbjct: 3 VTMQSIYANIQTNLGNLNKDMNRINQQISSGKQMDKISDNPVNLVNALGLRTNISEIGQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++ S+ L+ M +V + G A +++ +E + Sbjct: 63 QKNIKYGETVINASEDALTQMNDLVTRAKTLAIQQASGSMTPENRENAAQEVKNLWEQAI 122 Query: 126 TFANMTDEGQYLFSGINSS 144 AN T +Y+F G + Sbjct: 123 ILANSTVNNKYIFGGFRTD 141 Score = 42.0 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 10/95 (10%), Positives = 33/95 (34%) Query: 263 DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGV 322 + +K ++ + + + Q + G I + N +S+ Sbjct: 910 SQIQASALQKSIAELDTLHNELTNQISDFGARANRIEVQNNIYMNLKLATSENLSELEDT 969 Query: 323 EQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + A +L + + ++ ++S++++L Sbjct: 970 DLVEAIMELKAKETAYQAALSSASRTMQMSLVDFL 1004 >gi|284989568|ref|YP_003408122.1| flagellar hook-associated protein 3 [Geodermatophilus obscurus DSM 43160] gi|284062813|gb|ADB73751.1| flagellar hook-associated protein 3 [Geodermatophilus obscurus DSM 43160] Length = 298 Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 49/143 (34%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ ++ + + KL +++ +G+ L+ Q+++ + + Sbjct: 3 ITHRAVTQTALLGLNTNLSSVAKLQQQLTSGKLISAPSDSPTGTNKALQIRQDQSAVEQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVG-PLVILLEGKTDNNKFPINAGMLRDSYESF 124 + S L + L+ VQ + + + +G + A + ES Sbjct: 63 AKNISDGQSWLDATDTALNEAVAQVQRVRALTVQAMNDGAVSTSSQRAIAVEVAALRESL 122 Query: 125 VTFANMTDEGQYLFSGINSSEKP 147 + AN + + LF G+ Sbjct: 123 LGVANSSINDRALFGGVTQGSTA 145 >gi|157371200|ref|YP_001479189.1| flagellar hook-associated protein 3 [Serratia proteamaculans 568] gi|157322964|gb|ABV42061.1| flagellar hook-associated protein 3 [Serratia proteamaculans 568] Length = 319 Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 119/350 (34%), Gaps = 40/350 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS ++++ + +K +++ +G+ + + Q ++ + Sbjct: 3 MSTSMMYQQNMSGITDNQSLFMKAAQQLSSGKKVSNPSDDPLAASQAVMLAQSQSENTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + +S + L + DM L++ G +N A L+ + + Sbjct: 63 ALARTFARQSVSMEETVLGGATSTIADM-KALIVNAGGTESDNDRDSLATQLQGLKDQLL 121 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+Y+F G + + P S++ ++ ++ ++ N + Sbjct: 122 NQANSTDGNGRYMFGGFVNDKPPFVD--NGGSVSYAGGNKAVEQKVDANRTMTIGHTG-- 177 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + + + S + + ID++ ++ Sbjct: 178 -------------DTVFMSLTSNPKPEPDGSAPVSNVFES-------IDIALKALKTPLK 217 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 D + + T N K + + ++ RA LG ++ + Sbjct: 218 D------------ADDATKQQVNDALAKANRGLDNSYNKVLSVRAELG-NQLQEMDTLDS 264 Query: 305 LQNKNNIID-TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++I+ T +S + + + + ++ SY +Q +S+ Sbjct: 265 IGKDRDMINQTQMSALVDADLAESISSYFMQQAALQASYKTFGDMQGMSL 314 >gi|222147581|ref|YP_002548538.1| flagella associated protein [Agrobacterium vitis S4] gi|221734569|gb|ACM35532.1| flagella associated protein [Agrobacterium vitis S4] Length = 320 Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 113/352 (32%), Gaps = 44/352 (12%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T + T++ + ++ D + +G + A + + + Sbjct: 2 TSLMTNTAAISALSTLRSISDDMNSTQNRVSSGYKVENASDNAAYWSIATTMRSDNKALG 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L + + T+ + S +V D+ LV E D K L++ S Sbjct: 62 AVEDAIGLGSAKTDTAYTGMKSAIDVVTDIKAKLVAAREPGVDKEKINKELVELKNQLSS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A + G+ + +S + + +M+ F+ N ++ Sbjct: 122 VAKSA--SFNGE--------------NWLYDNSDSTGTTQEMVGSFVRGN------DGNV 159 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + ++ + E D + A+ + + S N Sbjct: 160 SIKTITFDTTNSILINDEA---GDGGLLTKGTVATYAYGTTTTTASYYLISSVAGN---- 212 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + LT + M+S V + LS + + + +G + + + Sbjct: 213 ---------TSSASEVTLTSSTTDDEIDGMVSAVDKMLSNMTDAASTIGATTSRLELQDT 263 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F++N ++ IDT + + + + + +L L + ++ +Q LSI N Sbjct: 264 FIKNLSDTIDTGVGRLVDADMNEESTKLKALQTQQQLG------IQSLSIAN 309 >gi|307318921|ref|ZP_07598352.1| flagellin domain protein [Sinorhizobium meliloti AK83] gi|17380477|sp|Q52942|FLAD2_RHIME RecName: Full=Flagellin D gi|12057228|gb|AAB81421.2| FlaC [Sinorhizobium meliloti] gi|306895335|gb|EFN26090.1| flagellin domain protein [Sinorhizobium meliloti AK83] Length = 395 Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 43/102 (42%), Gaps = 6/102 (5%) Query: 254 TEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 + ++T+ A+ ++ V + L +I + LG I + F+ + ID Sbjct: 288 ASIENIDITNAAQAANLDALIRGVDEALEDLISATSALGSISMRIGMQEEFVSKLTDSID 347 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + I + + + + +L L + +++ +Q LSI N Sbjct: 348 SGIGRLVDADMNEESTRLKALQTQQQLA------IQSLSIAN 383 >gi|289740943|gb|ADD19219.1| vacuolar sorting protein/ubiquitin receptor vPS23 [Glossina morsitans morsitans] Length = 416 Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 67/216 (31%), Gaps = 29/216 (13%) Query: 139 SGI-NSSEKPLNGYFTKDSLAKKSF-------DQMLQGFLEENSKSLLAGQHLEVSSMNA 190 G N++ P N Y + A +F G+ + + G SS + Sbjct: 164 GGTQNAATGPGNSYLPYPTSAASAFPPYPPTASSSFSGYPPYPAANSAVG----ASSTSG 219 Query: 191 QQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVA 250 F FS + N+ N+S+ + I + + +R + Sbjct: 220 A--VTF--PPYMNFSSVPGY-NSGYNSSNPSTTGTITEEHIKASLVSAVEDKLRRRVQEK 274 Query: 251 VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 V + + L + ++ +G + I L E + + L++K Sbjct: 275 VNQCQAEIEALNRTKQELV---------EGSAKIDAIILRLQREEMELEKNINILRDKEQ 325 Query: 311 IIDTYISKSIG---VEQHTAHAQLSTLINKIEMSYM 343 ++ + ++ A + L ++ +Y Sbjct: 326 ELEKNLESLENSEVIDPDEAVTTTAPLYKQLLNAYA 361 >gi|257885374|ref|ZP_05665027.1| regulatory protein [Enterococcus faecium 1,231,501] gi|257821230|gb|EEV48360.1| regulatory protein [Enterococcus faecium 1,231,501] Length = 209 Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 55/142 (38%), Gaps = 9/142 (6%) Query: 71 LVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN------KFPINAGMLRDSYESF 124 L R+ Q + + ++I+ +++LL D + +++ + ++ Sbjct: 52 LTDIRMPK-QTGIDAAKEILAKFPKAILLLLTTFKDEEYIREAFSIGVKGYLIKQNLQAI 110 Query: 125 VTFANMTDEGQYLFSG--INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 + GQ +F I + + + T DS A SF + ++E + + Sbjct: 111 IPSVKSAYNGQAVFGNEIIETFTQMMKNKSTIDSHAYASFSERELAIIKEVAAGKNNKEI 170 Query: 183 LEVSSMNAQQMTDFIKQLEDKF 204 + ++ + ++I QL +K Sbjct: 171 ADALYLSDGTVRNYISQLLEKL 192 >gi|319650642|ref|ZP_08004782.1| flagellar hook-associated protein L [Bacillus sp. 2_A_57_CT2] gi|317397823|gb|EFV78521.1| flagellar hook-associated protein L [Bacillus sp. 2_A_57_CT2] Length = 286 Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 38/94 (40%) Query: 264 GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE 323 + + ML + + + + RA +G + ++ L + +S + ++ Sbjct: 192 ESNDPAVGDMLENIDKNIDNFLSARAQIGAKQNRVDLMEDRLSQQEVFSTRILSDNEDID 251 Query: 324 QHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 A +L+T + + + ++ + ++ ++L Sbjct: 252 MEKAIIELTTQESIHRAALSVGARIIQPTLTDFL 285 >gi|239621128|ref|ZP_04664159.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239516050|gb|EEQ55917.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 915 Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 74/265 (27%), Gaps = 12/265 (4%) Query: 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114 K A + + K S L+ Q Q LV L T + + A Sbjct: 228 LADAKQTTASLKQTVAAAQKASRQSGTLLTETQAGSQAFSTTLVGAL--DTSSAQLSGLA 285 Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENS 174 + ++ S N N+ PLN T S K + + G + Sbjct: 286 VHVNNAAGSITGSFNSAQNSVDTI--TNTLSAPLNATQTSISDLKDALTKAGIGKDTTDP 343 Query: 175 KSLLAGQHLEV--SSMNAQ--QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 + ++ S ++ Q Q+ F + + N S A + I Sbjct: 344 VGQNIWKQIDALDSLISKQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIAALN 403 Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEF-LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRA 289 S + + + + T + + + Q + + + + Sbjct: 404 TARGSLT--GTVMPSLTSSLNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKT 461 Query: 290 VLGISEKNINE-ERVFLQNKNNIID 313 + ++ ++ + + +I Sbjct: 462 TISSTQDSLRQVASDVATVRTDIAT 486 >gi|222147582|ref|YP_002548539.1| flaB [Agrobacterium vitis S4] gi|221734570|gb|ACM35533.1| flaB [Agrobacterium vitis S4] Length = 320 Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 106/352 (30%), Gaps = 44/352 (12%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T++ + ++++ + +G D A + + ++ Sbjct: 2 TSIMTNTSAMAALQTLRGIDQNMETTQNRISSGYKVDSAKDNAAYWSIATTMRSDNKALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L + T+ L S ++ + LV E D +K L++ S Sbjct: 62 TVQDALGLAASKADTAYTGLDSSIDVLSSIKSKLVAAREPGVDKDKINQEINELKNQLAS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A+ FSG N L T K+ + S + L Sbjct: 122 IAESAS--------FSGENW----LYNESTNPPTTKEMVASFNRASDGTVSVTTLKFNTS 169 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 E + ++ Q + I + + + T Sbjct: 170 ESTLIDTQNAENGILTRTTTATWAYGTTTTTGTYYLLDAESATPATGT------------ 217 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 LT N M+S V + L + + + LG I+ + Sbjct: 218 --------------EITLTTDMSNDDLDGMISAVDKMLQDLTDSASTLGAISSRIDSQDT 263 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F++N ++ ID + + + + + ++ L + ++ +Q LSI N Sbjct: 264 FVKNLSDTIDKGVGRLVDADMNEESTKIKALQTQQQLG------IQALSIAN 309 >gi|213693294|ref|YP_002323880.1| ABC-2 type transporter [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524755|gb|ACJ53502.1| ABC-2 type transporter [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 918 Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 74/265 (27%), Gaps = 12/265 (4%) Query: 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114 K A + + K S L+ Q Q LV L T + + A Sbjct: 228 LADAKQTTASLKQTVAAAQKASRQSGTLLAETQAGSQAFSTTLVGAL--DTSSAQLSGLA 285 Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENS 174 + ++ S N N+ PLN T S K + + G + Sbjct: 286 VHVNNAAGSITGSFNSAQNSVDTI--TNTLSAPLNATQTSISDLKNALTKAGIGKDTTDP 343 Query: 175 KSLLAGQHLEV--SSMNAQ--QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 + ++ S ++ Q Q+ F + + N S A + I Sbjct: 344 AGQNIWKQIDALDSLISKQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIAALN 403 Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEF-LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRA 289 S + + + + T + + + Q + + + + Sbjct: 404 TARGSLT--GTVMPSLTSSLNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKT 461 Query: 290 VLGISEKNINE-ERVFLQNKNNIID 313 + ++ ++ + + +I Sbjct: 462 TISSTQDSLRQVASDVATVRTDIAT 486 >gi|163758024|ref|ZP_02165112.1| flagellin protein [Hoeflea phototrophica DFL-43] gi|162284313|gb|EDQ34596.1| flagellin protein [Hoeflea phototrophica DFL-43] Length = 321 Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 114/348 (32%), Gaps = 40/348 (11%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T++ + +N + + +G + A + + ++ Sbjct: 2 TNTAAMAALQTLRTINSEMEMTQARVSSGYRVENAGDNAAYWSIATTMRSDNKAMSTVKD 61 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF 127 + L ++ + + S ++ ++ LV E D K L++ +S Sbjct: 62 ALGLGAAKVDIAYTAMDSSIDVISEIKSKLVAAREPGVDKTKIDKEITELKNQLQSISES 121 Query: 128 ANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSS 187 A+ FSG N + S A ++ GF + L++ L++ + Sbjct: 122 AS--------FSGEN--------WLNNTSTAAAGTKSVVGGF-NRDVNGLVSITTLDI-N 163 Query: 188 MNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM 247 + + M + + D +NA D + + + D Sbjct: 164 VTSLTMIGAASENLGILTRDVD-----ANALDPDAT-----------TTTARNYYLIDTG 207 Query: 248 FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQN 307 + LT + + M+ V S + + + LG K I+ + F+ N Sbjct: 208 ATTGTAASGAAIALTATTTDAEVEDMIRVVDSMFSDMTDAASNLGAISKRIDMQEDFVAN 267 Query: 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + ID+ I + + + + +L L + ++ +Q LSI N Sbjct: 268 LMDSIDSGIGRLVDADMNEESTRLKALQTQQQLG------IQSLSIAN 309 >gi|163758022|ref|ZP_02165110.1| flagellin protein [Hoeflea phototrophica DFL-43] gi|162284311|gb|EDQ34594.1| flagellin protein [Hoeflea phototrophica DFL-43] Length = 324 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 113/352 (32%), Gaps = 40/352 (11%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T+S + +N D + +G A + + ++ Sbjct: 2 TSIMTNSSAMAALQTLRSINNDMESTQSRISSGYKVGSASDNSAYWSIATTMRSDNQALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ + + S ++V ++ LV E D K L++ S Sbjct: 62 TVQDALGLGAAKVDVAYTGMESAIEVVSEIKAKLVAAREPGVDKTKIDKEITELKNQLVS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A+ FSG N LN T S K G +S + L Sbjct: 122 VAESAS--------FSGENW----LNNTTTAASGTKNVV-----GGFNRDSSGQVTITTL 164 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 +V++ + + + L D + NA D + + + Sbjct: 165 DVNTTSTTLIGAGNESLGILTKDIDA------NALDPDAT-----------TTTARDYYL 207 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 D + +LT + + M+ V + + + + LG K I+ + Sbjct: 208 IDTGSTTGTQASGTAISLTSATTDAQVEDMIRAVDSMFTQMTDAASNLGAVNKRISMQED 267 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ N N ID + + + + + +L L + ++ +Q LSI N Sbjct: 268 FVANLQNAIDKGVGRLVDADMNEESTRLKALQTQQQLG------IQALSIAN 313 >gi|157147095|ref|YP_001454414.1| hypothetical protein CKO_02872 [Citrobacter koseri ATCC BAA-895] gi|157084300|gb|ABV13978.1| hypothetical protein CKO_02872 [Citrobacter koseri ATCC BAA-895] Length = 294 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 67/187 (35%), Gaps = 3/187 (1%) Query: 26 SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSS 85 KL E+M T + + + +++ +E++ I + + S ++ LS ++++++ Sbjct: 12 ISKLMEQMSTQKRINVPSDDPVSASRLVQLNREQSAIKQYQSNISSLSGALSIQESNITA 71 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANM-TDEGQYLFSGINSS 144 + + + L + L +S V N + G YLFSG + Sbjct: 72 LSNQMLAVGDKLKLANNSTLSQKDMAGYGMELSSMLDSLVATLNAKNENGSYLFSGTQTD 131 Query: 145 EKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQ--QMTDFIKQLED 202 + + K D + + Q + S + +M + +K L D Sbjct: 132 SQTVTWDEAKGQYVYGGNDSSRETIVANGVSITENTQVAQAFSGSGNDLEMLNKLKALSD 191 Query: 203 KFSDDEY 209 K D Sbjct: 192 KMQDPNA 198 >gi|156973595|ref|YP_001444502.1| flagellar hook-associated protein FlgL [Vibrio harveyi ATCC BAA-1116] gi|156525189|gb|ABU70275.1| hypothetical protein VIBHAR_01298 [Vibrio harveyi ATCC BAA-1116] Length = 396 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 58/401 (14%), Positives = 133/401 (33%), Gaps = 50/401 (12%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQ 57 T IS+ ++ + + E++ +G+ SD L I Q Sbjct: 1 MLTRISSFHNYQSVQNDLRRQENKVHHNQEQLASGKQLTKPSDDPLA----THYIQSIGQ 56 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 ++ + + L + LV RL + +++ ++ V + + ++ G L Sbjct: 57 QEEQLRQYLDAIVLVRNRLENQEVAVANAEQFVDESKRLSMEMINGAFSPEDRAAKKREL 116 Query: 118 RDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKS 176 + +F+ AN D G Y+F+G +P + S+ D + + N + Sbjct: 117 EEIANNFMALANSQDESGNYVFAGTKPKTQPF-FRDSDGSVVYTGDDYQRKMKIASNIEM 175 Query: 177 LLAGQHLEVSSMNAQQMTDF-------------IKQLEDKFSDDEYWANNWSNASDHNIK 223 + +V S + DF + Q D+ D + + + S+ Sbjct: 176 GINYPGNKVFSEISNPFGDFEPQYGLQEGSELLLGQATDESKSDSNYKVTFVDMSNGKFG 235 Query: 224 YRIK-DTEGIDVSANVNMRGIRD--------------------------IMFVAVIGTEF 256 Y+++ D + V + GI+ I ++ Sbjct: 236 YQLEKDGGIVQVDDYSPIDGIQYEGVNIQLKGQVSAGDSITLEPRQTFSIFDAFKETMQW 295 Query: 257 LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYI 316 +++D + +M Q + + R +G ++ + ++ N + Sbjct: 296 SESSVSDASATAKLHQMTEEFQAAFVHMNKVRTDVGAKLSTLDIQEQNHEDFNLSLAKAK 355 Query: 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S ++ A + S ++ S K + L++ NY+ Sbjct: 356 SNFEDLDYSKAVIEFSENSRALQASQQAFGKTKDLTLFNYI 396 >gi|299531279|ref|ZP_07044689.1| flagellar hook-associated protein 3 [Comamonas testosteroni S44] gi|298720686|gb|EFI61633.1| flagellar hook-associated protein 3 [Comamonas testosteroni S44] Length = 404 Score = 44.7 bits (104), Expect = 0.021, Method: Composition-based stats. Identities = 58/413 (14%), Positives = 120/413 (29%), Gaps = 66/413 (15%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSS-----DYGLQLGARVTSILEW 55 M I T+++++ V L E+ G+ D A Sbjct: 1 MSINRIGTANMYDSTINNLGSRQSSLVDLMEKTTAGKRVLRASDDPVAAAQAERARTRIT 60 Query: 56 EQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAG 115 E + + + ++ L +QD L+ G D Sbjct: 61 RSENDQRVLGAQRDVIAQG-----ESELGKAHGALQDFRDLLMQAGNGSYDQVARDALVK 115 Query: 116 MLRDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDS------------------ 156 + + + +AN D G +F G+ S + PL S Sbjct: 116 QMESLRDQVLGYANAKDSNGLPIFRGLGSPDTPLQSTPPGSSSQLNPGQNTGSDNGLPIS 175 Query: 157 ----------LAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSD 206 + G + S + T + +D + Sbjct: 176 LDGHAAWLNVPTGNGVFVVNGAASNSGKAWADVGSVTDPSKVTGDSYT--LVFTKDPTTG 233 Query: 207 DEYWANNWSNASDHN----------------------IKYRIKDTEGIDVSANVNMRGIR 244 + + N S+A+ N IK D + +S + Sbjct: 234 EVSYEINSSSATVTNPVVPSTPYKEGQAITVGGQQISIKGTPADGDSFTMSPSTRTDIFS 293 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + I T + + L + LS + G++ + R+ G K + Sbjct: 294 VLDQA--IATVKGGTGGSTALQQGL-GRALSELDSGMNRVQAMRSYAGDQLKRADGLESD 350 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++++ + S++ ++ TA +Q+ T ++ + ++QKLS+ NY+ Sbjct: 351 MKDQALTQEGARSRAEDIDMITALSQVETQKVGLQAALQSYAQMQKLSLFNYI 403 >gi|296455086|ref|YP_003662230.1| ABC transporter [Bifidobacterium longum subsp. longum JDM301] gi|296184518|gb|ADH01400.1| ABC-2 type transporter [Bifidobacterium longum subsp. longum JDM301] Length = 906 Score = 44.7 bits (104), Expect = 0.021, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 73/265 (27%), Gaps = 12/265 (4%) Query: 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114 K A + + S L+ Q Q LV L + + + A Sbjct: 228 LADAKQATASLKQTVAAAQNASRQSGTLLAETQAGSQAFSTTLVGAL--DSSSAQLSGLA 285 Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENS 174 + ++ S N N+ PLN T S K + + G + Sbjct: 286 VHVNNAAGSITGSFNSAQNSVDTI--TNTLSAPLNATQTSISDLKDALTKAGIGKDTTDP 343 Query: 175 KSLLAGQHLEV--SSMNAQ--QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 + ++ S ++ Q Q+ F + + N S A + I Sbjct: 344 VGQNIWKQIDALDSLISKQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIAALN 403 Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEF-LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRA 289 S + + + + T + + + Q + + + + Sbjct: 404 TARGSLT--GTVMPSLTSSLNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKT 461 Query: 290 VLGISEKNINE-ERVFLQNKNNIID 313 + ++ ++ + + +I Sbjct: 462 TISSTQDSLRQVASDVATVRTDIAT 486 >gi|229827761|ref|ZP_04453830.1| hypothetical protein GCWU000182_03153 [Abiotrophia defectiva ATCC 49176] gi|229787960|gb|EEP24074.1| hypothetical protein GCWU000182_03153 [Abiotrophia defectiva ATCC 49176] Length = 507 Score = 44.7 bits (104), Expect = 0.021, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 80/278 (28%), Gaps = 17/278 (6%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ + + +K+ E+ TG+ L+ I + Sbjct: 3 VTNQIMTNNTLANINTNKLNLMKIEEQYETGKKIQRPSDDPVVAIRALKLRNNLTEINQY 62 Query: 66 LHSNSL-VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 N + +++ L+ + I + G G + ++ + Sbjct: 63 FKKNVPDAKSWIQVTESALTQVTDICTTLHGLADQGANGTLTSTDRTSIMKTMQQYRQQI 122 Query: 125 VTFANMTDEGQYLFSGINSSE--KPLNG-----YFTKDSLAKKSFDQMLQGFLEENSKSL 177 N G+Y+F+G + LN Y + K + L+ + + K Sbjct: 123 YQEGNANYAGRYVFTGYKTDTSLTYLNDDKSKQYTITEEFDKTAIKTNLRTYGGYSVKDY 182 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEY------WANNWSNASDHNIKYRIKDTEG 231 G E S Q +++ K + + N D +I ++ E Sbjct: 183 EPGGANEFSEHPENQEISYLRLAYKKLDAAADGYPKLTYKDEDGNEGDIDITSTDENGET 242 Query: 232 IDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVL 269 I ++ + A + L+D A L Sbjct: 243 ITSNSP---DAYKKPDSGAKYIADTGELILSDEAAEQL 277 >gi|76579450|gb|ABA48925.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 1710b] Length = 396 Score = 44.7 bits (104), Expect = 0.022, Method: Composition-based stats. Identities = 48/389 (12%), Positives = 109/389 (28%), Gaps = 54/389 (13%) Query: 23 NKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAH 82 +L++++ +G S ++ +A+ + ++V L T Sbjct: 6 QAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLAQYTQNQTIVQTALQTEDTT 65 Query: 83 LSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDE-GQYLFSGI 141 L+S+ ++ L+ +G ++ A ++ S + +T AN D G YLF+G Sbjct: 66 LTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLLTLANTADGAGNYLFAGF 125 Query: 142 NSSEKPLN-----------GYFT-----KDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 + +P + Y D+ D F+ L Sbjct: 126 QPTTQPFSNKPGGGVTYAGDYGARAVQIADTRTVSQGDNGANVFMSVPFLGSLPVPAAGA 185 Query: 186 SSMNAQQMTDF-IKQLEDKFSDDEYWANNWSNA-------SDHNIKYRIKDTEGIDVS-- 235 S+ + I D + ++ A +D+++ S Sbjct: 186 SNTGTGTIGAVSITNPSDPTNTHQFTITFGGTAAAPTYTVTDNSVTPPTTTAAQAYSSGQ 245 Query: 236 -----------------------ANVNMRGIRDIMFVAVIGTEF----LSKNLTDGARNV 268 G + + + A Sbjct: 246 GINLGGQTVAVSGKPAVGDTFTVTPAPQAGTDVFATLDTVIAALKSPVGNSQTASTALTN 305 Query: 269 LTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAH 328 + + ++ ++ +A +G + + + +S A Sbjct: 306 TMATASTKLMNTMTNVLTVQASVGGRLQEVKAMQAVTTTNTLQTTNSLSNLTDTNLPAAI 365 Query: 329 AQLSTLINKIEMSYMITTKLQKLSILNYL 357 +Q L N + + ++Q LS+ YL Sbjct: 366 SQFLQLQNSLSAAQKAFVQMQNLSLFQYL 394 >gi|69249446|ref|ZP_00604982.1| regulatory protein, LuxR:Response regulator receiver [Enterococcus faecium DO] gi|257880327|ref|ZP_05659980.1| regulatory protein [Enterococcus faecium 1,230,933] gi|257894240|ref|ZP_05673893.1| regulatory protein [Enterococcus faecium 1,231,408] gi|260562369|ref|ZP_05832883.1| regulatory protein [Enterococcus faecium C68] gi|293553074|ref|ZP_06673716.1| DNA-binding response regulator [Enterococcus faecium E1039] gi|293559445|ref|ZP_06675983.1| DNA-binding response regulator [Enterococcus faecium E1162] gi|293568332|ref|ZP_06679655.1| DNA-binding response regulator [Enterococcus faecium E1071] gi|294618821|ref|ZP_06698347.1| DNA-binding response regulator [Enterococcus faecium E1679] gi|314937987|ref|ZP_07845298.1| response regulator receiver domain protein [Enterococcus faecium TX0133a04] gi|314941587|ref|ZP_07848471.1| response regulator receiver domain protein [Enterococcus faecium TX0133C] gi|314948427|ref|ZP_07851815.1| response regulator receiver domain protein [Enterococcus faecium TX0082] gi|314951384|ref|ZP_07854436.1| response regulator receiver domain protein [Enterococcus faecium TX0133A] gi|314995348|ref|ZP_07860454.1| response regulator receiver domain protein [Enterococcus faecium TX0133a01] gi|68194157|gb|EAN08690.1| regulatory protein, LuxR:Response regulator receiver [Enterococcus faecium DO] gi|257814555|gb|EEV43313.1| regulatory protein [Enterococcus faecium 1,230,933] gi|257830619|gb|EEV57226.1| regulatory protein [Enterococcus faecium 1,231,408] gi|260073293|gb|EEW61634.1| regulatory protein [Enterococcus faecium C68] gi|291588941|gb|EFF20766.1| DNA-binding response regulator [Enterococcus faecium E1071] gi|291594944|gb|EFF26295.1| DNA-binding response regulator [Enterococcus faecium E1679] gi|291602783|gb|EFF32993.1| DNA-binding response regulator [Enterococcus faecium E1039] gi|291606600|gb|EFF35996.1| DNA-binding response regulator [Enterococcus faecium E1162] gi|313590441|gb|EFR69286.1| response regulator receiver domain protein [Enterococcus faecium TX0133a01] gi|313596442|gb|EFR75287.1| response regulator receiver domain protein [Enterococcus faecium TX0133A] gi|313599607|gb|EFR78450.1| response regulator receiver domain protein [Enterococcus faecium TX0133C] gi|313642662|gb|EFS07242.1| response regulator receiver domain protein [Enterococcus faecium TX0133a04] gi|313645152|gb|EFS09732.1| response regulator receiver domain protein [Enterococcus faecium TX0082] Length = 209 Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 55/142 (38%), Gaps = 9/142 (6%) Query: 71 LVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN------KFPINAGMLRDSYESF 124 L R+ Q + + ++I+ +++LL D + +++ + ++ Sbjct: 52 LTDIRMPK-QTGIDAAKEILAKFPKAILLLLTTFKDEEYIREAFSIGVKGYLIKQNLQAI 110 Query: 125 VTFANMTDEGQYLFSG--INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 + GQ +F I + + + T DS A SF + ++E + + Sbjct: 111 IPSVKSAYNGQAVFGNEIIETFTQMMKNKPTIDSHAYASFSERELAIIKEVAAGKNNKEI 170 Query: 183 LEVSSMNAQQMTDFIKQLEDKF 204 + ++ + ++I QL +K Sbjct: 171 ADALYLSDGTVRNYISQLLEKL 192 >gi|294501823|ref|YP_003565523.1| flagellar hook-associated protein FlgL [Bacillus megaterium QM B1551] gi|294351760|gb|ADE72089.1| flagellar hook-associated protein FlgL [Bacillus megaterium QM B1551] Length = 293 Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats. Identities = 27/187 (14%), Positives = 66/187 (35%), Gaps = 4/187 (2%) Query: 18 LTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLS 77 L ++ TG+ T + + + + + + + Sbjct: 15 QISNSYNKLETLQNQLSTGKKITRPSDDPIVATKGMAYRSNLSEVNQYKRNLTEAQSWFD 74 Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 +S++ L + I+Q +V L G +++ A + ++ N G Y+ Sbjct: 75 SSESGLEQVNSILQRTKELVVQGLNGTNESDDRQAIAREIEQLKLDYMQVGNTQVAGNYI 134 Query: 138 FSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFI 197 F+G+N P+ ++++ + L F E SK + ++ ++ Q D + Sbjct: 135 FNGVNVGAAPI----SENASGMIESNINLDPFSVEVSKGIQLRVNIHPENIFGQGAFDLM 190 Query: 198 KQLEDKF 204 ++ F Sbjct: 191 NNVQTAF 197 >gi|168699686|ref|ZP_02731963.1| flagellar hook-associated protein FlgL [Gemmata obscuriglobus UQM 2246] Length = 311 Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats. Identities = 32/335 (9%), Positives = 90/335 (26%), Gaps = 47/335 (14%) Query: 23 NKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAH 82 + D K ++++ +G + ++ ++ E + N + + S T L++ + Sbjct: 22 SADLAKFYDQVSSGVRIEKASDDPSKYPALTEAKAASNRLKSYAGTVSESTAVLNSGVST 81 Query: 83 LSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGIN 142 L + I+ + + T A + + N +G LFSG Sbjct: 82 LQDVNDILVRAKNIALEANDASTQPESREALASEVDSLISRALITVNSRPDGSSLFSGTA 141 Query: 143 SSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLED 202 +F + + G + + Sbjct: 142 LDT--------------NAFRVATTDAQGRPATVVYDGADQRARVVTGR----------- 176 Query: 203 KFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLT 262 + R +E G + + + + + Sbjct: 177 ----------------GTTVDTRYVGSEVFQ------QPGADVFASLIALRDDLRGTSGS 214 Query: 263 DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGV 322 N + ++ + I + ++ + + D+ + G Sbjct: 215 SATFNQALDQRITDLTAARDSISATIGEQAGNLATLSTLSNVISDSKLDFDSRVGDLEGT 274 Query: 323 EQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + A ++ ++ Y +T +L +L+++ Sbjct: 275 DYAEAVVKMQEASTALQAIYAVTAQLADPGLLDFI 309 >gi|94263280|ref|ZP_01287096.1| Flagellin-like:Flagellin hook IN [delta proteobacterium MLMS-1] gi|93456363|gb|EAT06487.1| Flagellin-like:Flagellin hook IN [delta proteobacterium MLMS-1] Length = 1321 Score = 44.7 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 54/139 (38%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ SI+ + LNKD ++++++ +G+ D + + L + I + Sbjct: 3 VTMQSIYANIQTNLGNLNKDMNRINQQISSGKQMDKISDNPVNLVNALGLRTNISEIGQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++ S+ L+ M +V + G A +++ +E + Sbjct: 63 QKNIKYGETVINASEDALTQMNDLVTRAKTLAIQQASGSMTPENRENAAQEVKNLWEQAI 122 Query: 126 TFANMTDEGQYLFSGINSS 144 AN T +Y+F G + Sbjct: 123 ILANSTVNNKYIFGGFRTD 141 Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats. Identities = 11/95 (11%), Positives = 33/95 (34%) Query: 263 DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGV 322 + +K ++ + + I Q + G I + N +S+ Sbjct: 1227 SQIQASALQKSIAELDTLHNEITNQVSDFGARANRIEVQNNIYMNLKLATSENLSELEDT 1286 Query: 323 EQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + A +L + + ++ ++S++++L Sbjct: 1287 DLVEAIMELKAKETAYQAALSSASRSMQMSLVDFL 1321 >gi|328473446|gb|EGF44294.1| flagellar hook-associated protein FlgL [Vibrio parahaemolyticus 10329] Length = 397 Score = 44.7 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 11/168 (6%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQ 57 T IS+ ++ + + E++ +G+ SD L I Q Sbjct: 1 MLTRISSFHNYQSVQNDLRRQENKIHHNQEQLASGKKLLKPSDDPLA----AHYIQNIGQ 56 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 ++ + + L S LV RL + ++++ + + + ++ G L Sbjct: 57 QQEQLKQYLSSIVLVRNRLENHEVNIANAESFADESKRLTMEMINGAFSAEDRQAKKREL 116 Query: 118 RDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ 164 + +F+ N D G Y+F+G +P Y KD + + D Sbjct: 117 EEIANNFLNLVNAQDESGNYVFAGTKPKSQPF--YRDKDGSVQYAGDD 162 >gi|2599232|gb|AAC53430.1| laminin alpha 5 chain [Mus musculus] Length = 3635 Score = 44.7 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 36/345 (10%), Positives = 101/345 (29%), Gaps = 53/345 (15%) Query: 23 NKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAE-RLHSNSLVTKRLSTSQA 81 + ++ E++ + + L + + + + ++T++ Sbjct: 2265 QRLMARVQEQLTS--FWEENQSLAT------HIRDQLAQYESGLMDLREALNQAVNTTRE 2316 Query: 82 HLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG----QYL 137 + + + L E DN D+ ++L Sbjct: 2317 AEELNSRNQERVKEALQWKQELSQDNATLKATLQAASLILGHVSELLQGIDQAKEDLEHL 2376 Query: 138 FSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFI 197 + ++ + PL S A D + + LA + + FI Sbjct: 2377 AASLDGAWTPLLKRMQAFSPASSKVDLVEAAEAHAQKLNQLAINLSGI--ILGINQDRFI 2434 Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 ++ + SNA + + + + + + +R + + Sbjct: 2435 QRAVEA-----------SNAYSSIL-------QAVQAAEDAAGQALRQASRTWEMVVQ-- 2474 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSG-IIEQRAVLGISEKNINEERVFLQ---NKNNIID 313 + L GAR +L L I+ + LG+++ + + L + N + Sbjct: 2475 -RGLAAGARQLLAN------SSALEETILGHQGRLGLAQGRLQAAGIQLHNVWARKNQLA 2527 Query: 314 TYISK---SIGVEQHTAHAQL----STLINKIEMSYMITTKLQKL 351 I + + ++ ++ + + + + ++LQ + Sbjct: 2528 AQIQEAQAMLAMDTSETSEKIAHAKAVAAEALSTATHVQSQLQGM 2572 >gi|23464758|ref|NP_695361.1| hypothetical protein BL0138 [Bifidobacterium longum NCC2705] gi|23325330|gb|AAN23997.1| hypothetical protein with similarity to pip phage infection protein of L. lactis [Bifidobacterium longum NCC2705] Length = 912 Score = 44.7 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 33/257 (12%), Positives = 73/257 (28%), Gaps = 12/257 (4%) Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 A + + K S L+ Q Q LV L T + + A + ++ Sbjct: 236 ASLKQTVAAAQKASRQSGTLLTETQAGSQAFSTTLVGAL--DTSSAQLSGLAVHVNNAAG 293 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 S N N+ PLN T S K + + G + + Sbjct: 294 SITGSFNSAQNSVDTI--TNTLSAPLNATQTSISDLKDALTKAGIGKDTTDPVGQNIWKQ 351 Query: 183 LEV--SSMNAQ--QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 ++ S ++ Q Q+ F + + N S A + I S Sbjct: 352 IDALDSLISKQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIAALNTARGSLT- 410 Query: 239 NMRGIRDIMFVAVIGTEF-LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 + + + + T + + + Q + + + + + ++ + Sbjct: 411 -GTVMPSLTSSLNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKTTISSTQDS 469 Query: 298 INE-ERVFLQNKNNIID 313 + + + +I Sbjct: 470 LRQVASDVATVRTDIAT 486 >gi|1586274|prf||2203365A laminin alpha5 Length = 3610 Score = 44.7 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 36/345 (10%), Positives = 101/345 (29%), Gaps = 53/345 (15%) Query: 23 NKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAE-RLHSNSLVTKRLSTSQA 81 + ++ E++ + + L + + + + ++T++ Sbjct: 2265 QRLMARVQEQLTS--FWEENQSLAT------HIRDQLAQYESGLMDLREALNQAVNTTRE 2316 Query: 82 HLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG----QYL 137 + + + L E DN D+ ++L Sbjct: 2317 AEELNSRNQERVKEALQWKQELSQDNATLKATLQAASLILGHVSELLQGIDQAKEDLEHL 2376 Query: 138 FSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFI 197 + ++ + PL S A D + + LA + + FI Sbjct: 2377 AASLDGAWTPLLKRMQAFSPASSKVDLVEAAEAHAQKLNQLAINLSGI--ILGINQDRFI 2434 Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 ++ + SNA + + + + + + +R + + Sbjct: 2435 QRAVEA-----------SNAYSSIL-------QAVQAAEDAAGQALRQASRTWEMVVQ-- 2474 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSG-IIEQRAVLGISEKNINEERVFLQ---NKNNIID 313 + L GAR +L L I+ + LG+++ + + L + N + Sbjct: 2475 -RGLAAGARQLLAN------SSALEETILGHQGRLGLAQGRLQAAGIQLHNVWARKNQLA 2527 Query: 314 TYISK---SIGVEQHTAHAQL----STLINKIEMSYMITTKLQKL 351 I + + ++ ++ + + + + ++LQ + Sbjct: 2528 AQIQEAQAMLAMDTSETSEKIAHAKAVAAEALSTATHVQSQLQGM 2572 >gi|308050365|ref|YP_003913931.1| flagellar hook-associated protein 3 [Ferrimonas balearica DSM 9799] gi|307632555|gb|ADN76857.1| flagellar hook-associated protein 3 [Ferrimonas balearica DSM 9799] Length = 404 Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 5/146 (3%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSIL--EWEQEKNHIA 63 I+T+ + L D+ + + +G+ V SI+ +Q+ I Sbjct: 3 IATNQFYNLNTTNLLRLQSDTNGTLQHLSSGKK--IHTAADDPVASIVLENLKQQSQQIN 60 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + + +L RLS + L + ++ + +V +G + A LR++ ++ Sbjct: 61 QYKANINLANNRLSQQEGRLGEYENLIMNSRDLIVQGNDGALSDENKGALAQDLRETRDA 120 Query: 124 FVTFANMTD-EGQYLFSGINSSEKPL 148 + AN D G +LF G + KP Sbjct: 121 ILALANNQDESGNFLFGGYQTGTKPF 146 >gi|28897560|ref|NP_797165.1| flagellar hook-associated protein FlgL [Vibrio parahaemolyticus RIMD 2210633] gi|260364618|ref|ZP_05777220.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus K5030] gi|260878277|ref|ZP_05890632.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus AN-5034] gi|260898107|ref|ZP_05906603.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus Peru-466] gi|260901961|ref|ZP_05910356.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus AQ4037] gi|551518|gb|AAD10270.1| hook-associated protein type 3 [Vibrio parahaemolyticus] gi|28805772|dbj|BAC59049.1| hook-associated protein type 3 FlgL [Vibrio parahaemolyticus RIMD 2210633] gi|308086120|gb|EFO35815.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus Peru-466] gi|308090194|gb|EFO39889.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus AN-5034] gi|308106762|gb|EFO44302.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus AQ4037] gi|308115100|gb|EFO52640.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus K5030] Length = 397 Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 11/168 (6%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQ 57 T IS+ ++ + + E++ +G+ SD L I Q Sbjct: 1 MLTRISSFHNYQSVQNDLRRQENKIHHNQEQLASGKKLLKPSDDPLA----AHYIQNIGQ 56 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 ++ + + L S LV RL + ++++ + + + ++ G L Sbjct: 57 QQEQLKQYLSSIVLVRNRLENHEVNIANAESFADESKRLTMEMINGAFSAEDRQAKKREL 116 Query: 118 RDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ 164 + +F+ N D G Y+F+G +P Y KD + + D Sbjct: 117 EEIANNFLNLVNAQDESGNYVFAGTKPKSQPF--YRDKDGSVQYAGDD 162 >gi|17865768|sp|Q61001|LAMA5_MOUSE RecName: Full=Laminin subunit alpha-5; AltName: Full=Laminin-10 subunit alpha; AltName: Full=Laminin-11 subunit alpha; AltName: Full=Laminin-15 subunit alpha; Flags: Precursor Length = 3718 Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 36/345 (10%), Positives = 101/345 (29%), Gaps = 53/345 (15%) Query: 23 NKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAE-RLHSNSLVTKRLSTSQA 81 + ++ E++ + + L + + + + ++T++ Sbjct: 2348 QRLMARVQEQLTS--FWEENQSLAT------HIRDQLAQYESGLMDLREALNQAVNTTRE 2399 Query: 82 HLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG----QYL 137 + + + L E DN D+ ++L Sbjct: 2400 AEELNSRNQERVKEALQWKQELSQDNATLKATLQAASLILGHVSELLQGIDQAKEDLEHL 2459 Query: 138 FSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFI 197 + ++ + PL S A D + + LA + + FI Sbjct: 2460 AASLDGAWTPLLKRMQAFSPASSKVDLVEAAEAHAQKLNQLAINLSGI--ILGINQDRFI 2517 Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 ++ + SNA + + + + + + +R + + Sbjct: 2518 QRAVEA-----------SNAYSSIL-------QAVQAAEDAAGQALRQASRTWEMVVQ-- 2557 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSG-IIEQRAVLGISEKNINEERVFLQ---NKNNIID 313 + L GAR +L L I+ + LG+++ + + L + N + Sbjct: 2558 -RGLAAGARQLLAN------SSALEETILGHQGRLGLAQGRLQAAGIQLHNVWARKNQLA 2610 Query: 314 TYISK---SIGVEQHTAHAQL----STLINKIEMSYMITTKLQKL 351 I + + ++ ++ + + + + ++LQ + Sbjct: 2611 AQIQEAQAMLAMDTSETSEKIAHAKAVAAEALSTATHVQSQLQGM 2655 >gi|322692049|ref|YP_004221619.1| hypothetical protein BLLJ_1863 [Bifidobacterium longum subsp. longum JCM 1217] gi|320456905|dbj|BAJ67527.1| conserved hypothetical protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 883 Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 73/265 (27%), Gaps = 12/265 (4%) Query: 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114 K A + + S L+ Q Q LV L + + + A Sbjct: 199 LADAKQTTASLKQTVAAAQNASRQSGTLLAETQAGSQAFSTTLVGAL--DSSSAQLSGLA 256 Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENS 174 + ++ S N N+ PLN T S K + + G + Sbjct: 257 VHVNNAAGSITGSFNSAQNSVDTI--TNTLSAPLNATQTSISDLKDALTKAGIGKDTTDP 314 Query: 175 KSLLAGQHLEV--SSMNAQ--QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 + ++ S ++ Q Q+ F + + N S A + I Sbjct: 315 VGQNIWKQIDALDSLISKQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIAALN 374 Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEF-LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRA 289 S + + + + T + + + Q + + + + Sbjct: 375 TARGSLT--GTVMPSLTSSLNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKT 432 Query: 290 VLGISEKNINE-ERVFLQNKNNIID 313 + ++ ++ + + +I Sbjct: 433 TISSTQDSLRQVASDVATVRTDIAT 457 >gi|187478192|ref|YP_786216.1| flagellar hook-associated protein 3 [Bordetella avium 197N] gi|115422778|emb|CAJ49306.1| flagellar hook-associated protein 3 [Bordetella avium 197N] Length = 410 Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 59/144 (40%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS I++ +L E++ +G+ + + Q + Sbjct: 3 LSTSMIYQNGLNGILNQEAALSRLQEQLASGKRVLTPSDDPLAASLAVNVAQTASMNKNY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + + L + LSS +QD++ +V G + + +L+ + + + Sbjct: 63 SANRATLKQSLGAEENALSSAVTTLQDVMKRVVEAGNGTMSDADRQTLSNVLKGARDQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL 148 + AN TD GQYLFSG + +P Sbjct: 123 SLANSTDGNGQYLFSGYQGNTQPF 146 >gi|54307276|ref|YP_128296.1| flagellar hook-associated protein FlgL [Photobacterium profundum SS9] gi|46911696|emb|CAG18494.1| Hypothetical FlgL flagellar hook-associated protein [Photobacterium profundum SS9] Length = 304 Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 110/352 (31%), Gaps = 54/352 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ + M + K ++ +G+ ++ ++E+ +I++ Sbjct: 3 LSTAQLNTVMLTSMQSSTTGVNKSFMQLNSGEKMLKPSDDPLGSVQLMMLDREQANISQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN-AGMLRDSYESF 124 + + + +L +++HL + V + ++ + + A L + Sbjct: 63 QKNITNLEAQLGKTESHLDASNNAVLRVQELVISVSNASNSTVEGREAIATELESLLDQL 122 Query: 125 VTFANM-TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 AN G Y+F+G + +P+ D ++ + + Sbjct: 123 ADTANSKNPNGDYIFAGTKTDTQPIT------------KDPATGKYVYNGNGDQRMVKVA 170 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 E S+ A Q ED F + ++ NA + I Sbjct: 171 ESMSIPANQ------TAEDIFFNG---GSDIFNALNKTIT-------------------- 201 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + + + + + L I + +G + + Sbjct: 202 -----------DLRNPAIEGASLTASVTAAQRDIDGTLKSINQVWTEVGGQRNALTMVQG 250 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++ + I ++ A +L++ + ++ + M +K+Q LS+ Sbjct: 251 SHEDNKLVNSKLIGDVKDLDYSEAILELNSQMAALQATQMTYSKVQNLSLFK 302 >gi|283850814|ref|ZP_06368100.1| flagellar hook-associated protein 3 [Desulfovibrio sp. FW1012B] gi|283573737|gb|EFC21711.1| flagellar hook-associated protein 3 [Desulfovibrio sp. FW1012B] Length = 518 Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 57/171 (33%), Gaps = 3/171 (1%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 ++L + + + + + + L+ + + L+S+ ++ + G G + Sbjct: 47 GAVTVLNTRADIDQLGQYKRNITTANGWLNQADSTLTSVSTLITTIKGYAEQGATGTITD 106 Query: 108 NKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ 167 A +R ++ ++ AN T G LF+G + + S +FD L Sbjct: 107 ENRGEIASAVRQYFQQLISQANTTYSGNSLFAGQKTDTEAFTEGLGMTS-NDTAFDTALA 165 Query: 168 GFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNAS 218 + N + G + T E + W +A+ Sbjct: 166 AWP--NPGYTVEGDTDSTVLVQFTDTTASPPAFEYTADGGQTWTAGTYSAT 214 >gi|195107645|ref|XP_001998419.1| GI23639 [Drosophila mojavensis] gi|193915013|gb|EDW13880.1| GI23639 [Drosophila mojavensis] Length = 2701 Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 52/191 (27%), Gaps = 27/191 (14%) Query: 107 NNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPL---NGYFTKDSLAKKSFD 163 +N N+ + T + G ++F NS KP +F + + + Sbjct: 2303 SNAVSANSTTASAASSKLNTKQSADVGGGFVFG--NSD-KPFAQSTSWFGGSTGKAQQSN 2359 Query: 164 QMLQGFLEEN-----SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNAS 218 + GF + + + G + ++ + F + N SN S Sbjct: 2360 SIFGGFSGSDNKINNQTTSIFGGQPQAANQSETPKLTF------SPFGENNLTNTSSNVS 2413 Query: 219 DHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTD--GARNVLTKKMLST 276 I + ++ + + N + + + T Sbjct: 2414 SGVTFGSIAGSSVTPS--------FGNLAKDKTMSFADMINNQNQIKDNKENIAAASIGT 2465 Query: 277 VQQGLSGIIEQ 287 S I +Q Sbjct: 2466 KAVVASTIADQ 2476 >gi|33596146|ref|NP_883789.1| flagellar hook-associated protein FlgL [Bordetella parapertussis 12822] gi|33601548|ref|NP_889108.1| flagellar hook-associated protein FlgL [Bordetella bronchiseptica RB50] gi|33573149|emb|CAE36797.1| flagellar hook-associated protein 3 [Bordetella parapertussis] gi|33575984|emb|CAE33063.1| flagellar hook-associated protein 3 [Bordetella bronchiseptica RB50] Length = 510 Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 59/159 (37%), Gaps = 4/159 (2%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ I++ +L E++ +G+ + Q + + Sbjct: 3 LSTALIYQNGLNGVLNQEAAMARLQEQLSSGRRVLTPADDPLAAALAVNVSQTSSMNSNY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L L S+ K +Q+M+ +V G + L+ + E V Sbjct: 63 DANRKQAEQALGAQTNTLQSVVKNMQEMLKRVVEAGNGTMSDADRQALVIALKGAREELV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFD 163 AN TD GQYLFSG +P Y + K +++ Sbjct: 123 GLANATDGNGQYLFSGYKGFTQP---YSFDAATGKVTYN 158 >gi|149189843|ref|ZP_01868123.1| flagellar hook-associated protein L [Vibrio shilonii AK1] gi|148836329|gb|EDL53286.1| flagellar hook-associated protein L [Vibrio shilonii AK1] Length = 299 Score = 44.3 bits (103), Expect = 0.027, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 110/355 (30%), Gaps = 65/355 (18%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTG----QSSDYGLQLGARVTSILEWEQEKNH 61 IS + + M + N K+ ++M TG + SD + +L ++E + Sbjct: 3 ISDTQFSQMMLQSLQTNNAGLGKVLQQMATGDRLTKLSDDPMA----SIQLLNLDREGSA 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + + V LS+ + +L S+ + ++ M ++ G + L Sbjct: 59 INQYQRNIANVKTTLSSQEVYLDSVNESLKSMRELVLWGSNGTLTDEDRDGMITELESLR 118 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S + N DE G YLFSG + L+ +S A D Sbjct: 119 DSIESSFNAQDEEGHYLFSGTKTDTPALS-----NSGAGYVVD--------------GNS 159 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 V+ M + + N+ +I Sbjct: 160 DKRVVTVAKGVTMESNMTAKDILELGGGN-----------NVLNQID------------- 195 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 + EF + + A L+ + L ++ +G N++ Sbjct: 196 ----------ALIVEFKNPSPNFQAE---VDASLNAIDDTLGNVLGAMTEIGGRHNNLDL 242 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 +D S ++ A +LS + ++ + K+ LS+ + Sbjct: 243 MDGAHGENKLFVDKVTSDISALDYGEASVRLSNYMAALQATQASYVKINDLSLFD 297 >gi|213645995|ref|ZP_03376048.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 240 Score = 44.3 bits (103), Expect = 0.027, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 82/274 (29%), Gaps = 40/274 (14%) Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYLFS 139 + LS + +Q +V G ++ A L+ + + AN TD G+Y+F+ Sbjct: 1 SVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLMNLANSTDGNGRYIFA 60 Query: 140 GINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQ 199 G + P + +KS Q + V Q+ + I Sbjct: 61 GYKTEAAPFDQATGGYHGGEKSVTQ------------QVDSARTMVIGHTGAQIFNSITS 108 Query: 200 LEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSK 259 D N D I A + T Sbjct: 109 NAVPEPDGSDSEKNLFVMLDTAI---------------------------AALKTPVEGN 141 Query: 260 NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKS 319 ++ K ++ L+ ++ RA LG ++ ++ +S Sbjct: 142 DVEKEKAAAAIDKTNRGLKNSLNNVLTVRAELGTQLSELSTLDSLGSDRALGQKLQMSNL 201 Query: 320 IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + V+ ++ + ++ SY T +Q +S+ Sbjct: 202 VDVDWNSVISSYVMQQAALQASYKTFTDMQGMSL 235 >gi|148976401|ref|ZP_01813107.1| flagellar hook-associated protein L [Vibrionales bacterium SWAT-3] gi|145964224|gb|EDK29480.1| flagellar hook-associated protein L [Vibrionales bacterium SWAT-3] Length = 396 Score = 44.3 bits (103), Expect = 0.027, Method: Composition-based stats. Identities = 45/396 (11%), Positives = 120/396 (30%), Gaps = 48/396 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G+ SD L + Q+ Sbjct: 5 ISSFHNYQSVQNDLRRQENKVHHNQAQLASGKKLQSPSDDPLA----THYLQNIGQQSEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + + + +LV RL + +++ + + ++ ++ G +++ Sbjct: 61 LKQYVDAITLVRNRLEHHEVMIANSEGFADEAKRTVMEMINGALSPEDRLAKKREIQELA 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL------------NGYF--------------TK 154 +F+ AN D G Y F+G +P + Y Sbjct: 121 NNFLYLANSQDESGNYTFAGTKPKSQPFFRDNEGTVTYQGDDYQRKMRVASSFEMAMNDP 180 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYW---- 210 S D + + + L ++ +A+ + + D + + Sbjct: 181 GSKLFMEIDNPFGDYEPQYELEPASELLLGRATNSAEDGSTYKVTFVDMQTGKFAYQLEK 240 Query: 211 ------ANNWSNASD---HNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNL 261 A ++ A+ + + K S + R I E + + Sbjct: 241 DGAVVAAEDFDPATGIVYEGLNIQFKGQVTKGDSITLEPRETFSIFDTFKEAAEQVENPV 300 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 +D + +M + + R +G ++ + ++ + S Sbjct: 301 SDASATAKLHQMTEEFHAAFIHLTKARTDVGARLSTLDIQEQQHEDFKLSLAKAKSNFED 360 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A + + ++ S K + L++ NY+ Sbjct: 361 LDYSKAIIEFNENSRALQASQQAFGKTKDLTLFNYI 396 >gi|307731355|ref|YP_003908579.1| flagellar hook-associated protein 3 [Burkholderia sp. CCGE1003] gi|307585890|gb|ADN59288.1| flagellar hook-associated protein 3 [Burkholderia sp. CCGE1003] Length = 407 Score = 44.3 bits (103), Expect = 0.028, Method: Composition-based stats. Identities = 49/404 (12%), Positives = 126/404 (31%), Gaps = 52/404 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++ F + +L+ ++ +G S ++ +A+ Sbjct: 3 ISSTQYFTMNVATMSDQQAQLSQLYAQISSGVSLSTPSDNPLGAAQAVQLSSTATSLAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L + L S+ ++Q + ++ +G +N A L+ + Sbjct: 63 TSNQNTALASLQLEDSTLGSVNNVLQSIHTLVLRAGDGSLNNGDRGSIATELQSLRSQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTK----------------DSLAKKSFDQMLQG 168 T AN TD +G YLF+G SS +P N +S ++ D + Sbjct: 123 TLANATDPQGNYLFAGYQSSAQPYNTNSAGVVTYSGDTGTPAVQITNSHVVQTGDNGISI 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKD 228 F A + ++ ++ + ++ N+++++ + + Sbjct: 183 FGSVAPIGTSAVPAATAGNTGTGVISTVSLNNPTDPTNADTYSINFTSSTTYTVSQTDPA 242 Query: 229 TEGIDVS--------------------------------ANVNMRGIRDIMFVAVIGTEF 256 T + S + ++ + + Sbjct: 243 TGTVTTSGPQAFTAGSAITLGGQSVTISGAPNAGDSFSVTPATQGSMDVFANLSQLISTL 302 Query: 257 LSK---NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 S + + ++ ++ ++ ++ +A +G ++ I + Q Sbjct: 303 QSPISGGASTASFQSALVTSMTQLENTMNNVVTAQATVGGRQQEIKALQTVTQTNTLQTA 362 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S + + + N ++ + K+Q LS+ YL Sbjct: 363 NDLSDLTQTDIVKTVGKYTLAQNALQAAQQAFVKIQNLSLFQYL 406 >gi|51894115|ref|YP_076806.1| flagellar-hook associated protein [Symbiobacterium thermophilum IAM 14863] gi|51857804|dbj|BAD41962.1| flagellar-hook associated protein [Symbiobacterium thermophilum IAM 14863] Length = 293 Score = 44.3 bits (103), Expect = 0.028, Method: Composition-based stats. Identities = 20/171 (11%), Positives = 57/171 (33%), Gaps = 2/171 (1%) Query: 22 LNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQA 81 L + + + G++ + RV ++ K + + + + LS ++ Sbjct: 19 LRAQYARAQKRVY-GRALERPSDDPQRVIEAIDLTGMKVKLERAQRAATDAKEWLSIAET 77 Query: 82 HLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTF-ANMTDEGQYLFSG 140 L++M + +Q + ++ + N + + + N G+Y+F+G Sbjct: 78 SLTAMSEDLQAVYETMIQFGSPANQESTARENLALQIEGLRDAIKREMNTQHRGRYVFAG 137 Query: 141 INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQ 191 + +P + K S ++ + ++ + A Sbjct: 138 WAADTQPFEDDGSGGVEYKGSKHKIEREIAPGYKVAINIHGDELPYEIIAT 188 >gi|150395494|ref|YP_001325961.1| flagellin domain-containing protein [Sinorhizobium medicae WSM419] gi|150027009|gb|ABR59126.1| flagellin domain protein [Sinorhizobium medicae WSM419] Length = 395 Score = 44.3 bits (103), Expect = 0.028, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 254 TEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 + ++TD + ++ V + L +I + LG I + F+ + ID Sbjct: 288 ASVENIDITDATQAANLDALIRGVDEALEDLISATSALGSISMRIGMQEEFVSKLTDSID 347 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + I + + + + +L L + +++ +Q LSI N Sbjct: 348 SGIGRLVDADMNEESTRLKALQTQQQLA------IQSLSIAN 383 >gi|322690106|ref|YP_004209840.1| hypothetical protein BLIF_1928 [Bifidobacterium longum subsp. infantis 157F] gi|320461442|dbj|BAJ72062.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis 157F] Length = 877 Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 73/265 (27%), Gaps = 12/265 (4%) Query: 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114 K A + + S L+ Q Q LV L + + + A Sbjct: 199 LADAKQTTASLKQTVAAAQNASRQSGTLLAETQAGSQAFSTTLVGAL--DSSSAQLSGLA 256 Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENS 174 + ++ S N N+ PLN T S K + + G + Sbjct: 257 VHVNNAAGSITGSFNSAQNSVDTI--TNTLSAPLNATQTSISDLKDALTKAGIGKDTTDP 314 Query: 175 KSLLAGQHLEV--SSMNAQ--QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 + ++ S ++ Q Q+ F + + N S A + I Sbjct: 315 VGQNIWKQIDALDSLISKQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIAALN 374 Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEF-LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRA 289 S + + + + T + + + Q + + + + Sbjct: 375 TARGSLT--GTVMPSLTSSLNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKT 432 Query: 290 VLGISEKNINE-ERVFLQNKNNIID 313 + ++ ++ + + +I Sbjct: 433 TISSTQDSLRQVASDVATVRTDIAT 457 >gi|307131602|ref|YP_003883618.1| flagellar hook-associated protein flgL [Dickeya dadantii 3937] gi|306529131|gb|ADM99061.1| Flagellar hook-associated protein flgL [Dickeya dadantii 3937] Length = 309 Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats. Identities = 43/349 (12%), Positives = 107/349 (30%), Gaps = 48/349 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS IF++ + K +++ + + + Q + + Sbjct: 3 LSTSIIFQQSMQGVTDGLSAFSKTGQQLASNTRVLTPSDDPIAASKAVMVNQAQAQNEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + +++ + L+++ + L+ K DN++ + A LR + Sbjct: 63 ALARTFAENGMNSELSVLTNVATALTSASTTLLSADGTKNDNDR-QLIATSLRGLKSQLL 121 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G Y+F G + +P +++ +Q + ++ + + + Sbjct: 122 NLANSTDGNGSYVFGGYKTDSQPFTT-NASGTVSYVGGNQAISQQVDADRVMTVGHIGSD 180 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V ++ + A D I EG + Sbjct: 181 V-------------------FNNAGGTADIFGALDSVISALETPLEGATTAV-------- 213 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 A ++ L+ + +A LG+ + I+ Sbjct: 214 ------------------KDANLATINAASQGLKNALTNVSSAQATLGVQLQEIDTLDSI 255 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + ++ + ++ SY + +Q LS+ Sbjct: 256 GTDRTTANKQTLSDLVDIDMVATISTYMMQQQSLQASYKAFSDMQSLSL 304 >gi|227546877|ref|ZP_03976926.1| phage infection protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212636|gb|EEI80522.1| phage infection protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 887 Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 74/265 (27%), Gaps = 12/265 (4%) Query: 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114 K A + + K S L+ Q Q LV L T + + A Sbjct: 206 LADAKQTTASLKQTVAAAQKASRQSGTLLTETQAGSQAFSTTLVGAL--DTSSAQLSGLA 263 Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENS 174 + ++ S N N+ PLN T S K + + G + Sbjct: 264 VHVNNAAGSITGSFNSAQNSVDTI--TNTLSAPLNATQTSISDLKDALTKAGIGKDTTDP 321 Query: 175 KSLLAGQHLEV--SSMNAQ--QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 + ++ S ++ Q Q+ F + + N S A + I Sbjct: 322 VGQNIWKQIDALDSLISKQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIAALN 381 Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEF-LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRA 289 S + + + + T + + + Q + + + + Sbjct: 382 TARGSLT--GTVMPSLTSSLNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKT 439 Query: 290 VLGISEKNINE-ERVFLQNKNNIID 313 + ++ ++ + + +I Sbjct: 440 TISSTQDSLRQVASDVATVRTDIAT 464 >gi|296125660|ref|YP_003632912.1| flagellar hook-associated protein 3 [Brachyspira murdochii DSM 12563] gi|296017476|gb|ADG70713.1| flagellar hook-associated protein 3 [Brachyspira murdochii DSM 12563] Length = 417 Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 91/301 (30%), Gaps = 13/301 (4%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ + F R K + + TGQ Y Q + + ++ + + Sbjct: 3 VTEQAQFNRTVSTIKRNYSEMEASQTRLSTGQRVQYPHQNVTATINSIYYKTRMSSVDRY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 ++ +RLS + +S++ + + V + A + + E Sbjct: 63 QNNIVDGKERLSVAHDSMSAITQALNRARDLAVQGANSTYGADDRAKMAMEVEEMIERIY 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 + +G+++FSG + P ++ D A +S + + + N ++ + Sbjct: 123 DISKTQSKGEFVFSGTSIKTAPFRAFYGHDEKAGRSIIKSVMYEGDGNPQNREIENGQLI 182 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASD---HNIKYRIKDTEGIDVSANVNMRG 242 + F + S + A + D ++ IK + I+ Sbjct: 183 NVATPGNY-AFWGTDMEIISTTDASAYVAAENQDIMIDDMVINIKQGDNIETIVQ----- 236 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 R + + T + Q L+G + +G+ + Sbjct: 237 -RINDANGNVSASIGDLKGGQKVIQLKTGTPHKILLQDLAGGTVLQ-DIGLV--RVGAAN 292 Query: 303 V 303 Sbjct: 293 T 293 Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 12/102 (11%), Positives = 34/102 (33%), Gaps = 1/102 (0%) Query: 256 FLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 L D R + + L + L + +A ++ +++ I+ Sbjct: 316 LRDAMLNDDVR-AIGSEALGYIDSSLDNVATVQANASSKVTRLDMGYTSFEDQKLAIEEA 374 Query: 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++K+ ++ + S +L ++++YL Sbjct: 375 LAKNENIDYAEEIVNFNMWQYAHNASLQTAGRLLGRTLMDYL 416 >gi|282599763|ref|ZP_05971779.2| flagellar hook-associated protein 3 [Providencia rustigianii DSM 4541] gi|282567727|gb|EFB73262.1| flagellar hook-associated protein 3 [Providencia rustigianii DSM 4541] Length = 305 Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 62/181 (34%), Gaps = 3/181 (1%) Query: 22 LNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQA 81 + ++ +G+ + + + Q ++ + + S ++ + Sbjct: 13 AQSRWMDAGSQLASGKRVNKPSDDPQASSQAVRINQSESRNQQYVTSRGFAKTGMTLQMS 72 Query: 82 HLSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYLFS 139 LS M ++ + ++ +G + A L E V N TD G+Y+F+ Sbjct: 73 ILSQMTEVTTQIDTTIIQASNQGALSDKDRTSLAEQLTGLKEQLVGLGNTTDGNGRYIFA 132 Query: 140 GINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQ 199 G S + P T + K D+ + + + + +V + M + K Sbjct: 133 GFKSDKAPF-EIDTNGEVLYKGGDKPIMQNVASDREMTTYFTGAQVFETDGAGMVNVFKA 191 Query: 200 L 200 L Sbjct: 192 L 192 >gi|260774945|ref|ZP_05883846.1| flagellar hook-associated protein FlgL [Vibrio coralliilyticus ATCC BAA-450] gi|260609200|gb|EEX35358.1| flagellar hook-associated protein FlgL [Vibrio coralliilyticus ATCC BAA-450] Length = 397 Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats. Identities = 49/401 (12%), Positives = 121/401 (30%), Gaps = 57/401 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTG----QSSDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G ++SD L I Q+K Sbjct: 5 ISSFHNYQSVQNDLRRQEAKVHHNQAQLASGKKLMRASDDPLA----THYIQNIGQQKEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + + L RL + +S+ ++ + ++ ++ G L + Sbjct: 61 LRQFTDAIVLSRNRLEHHEVIISNAEQYADEAKRTVMEMINGSLSPEDRIAKRRELLEIS 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL------------NGYF--------------TK 154 +F+ +N+ D G Y+F+G +P + Y Sbjct: 121 NNFLNLSNVQDESGNYIFAGTKPKNQPFFRDKDGDVVYAGDDYQRKMKISNSLEMPINDP 180 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS-SMNAQQMTDFIKQLEDKFSDDEYW--- 210 S D F + ++ LE + + N + + D + + Sbjct: 181 GSKLFMEIDNPYGDFEPQYDLKGVSELLLERAINTNPDDQSTYKVTFVDMPDGNYGYQLE 240 Query: 211 -------ANNWSNA-----SDHNI--KYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF 256 A+N+ A D I K +I + I + + Sbjct: 241 RDGAVVKADNFDPAIGIKFEDVTIQVKGQITKGDAITLEPRKTYSIFDTFKQAM----KL 296 Query: 257 LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYI 316 +++D + ++ + + R +G ++ + + + Sbjct: 297 AEGSVSDTSNTAELHQITQEFHAAFIHLNKARTDVGARLNTLDIQEEQHDDFKMTLAKSK 356 Query: 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S ++ A + + ++ S K + L++ NY+ Sbjct: 357 SNFEDLDYADAIIEFNENSRALQASQQAFGKTKDLTLFNYI 397 >gi|156976148|ref|YP_001447054.1| flagellar hook-associated protein FlgL [Vibrio harveyi ATCC BAA-1116] gi|156527742|gb|ABU72827.1| hypothetical protein VIBHAR_04919 [Vibrio harveyi ATCC BAA-1116] Length = 299 Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 116/355 (32%), Gaps = 65/355 (18%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTG----QSSDYGLQLGARVTSILEWEQEKNH 61 IS S + M + N + ++M TG + SD + +L E+E + Sbjct: 3 ISDSQFSQMMLQSLQTNNAGLGHVLQQMATGDRLTKLSDDPIA----SIKLLNLERENSA 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + + + LS + HL S+ + ++ + ++ G + L+ Sbjct: 59 IGQYQSNIANLKTTLSAQETHLDSVNESLKSVRDLVLWGANGTLTDEDRSGMIIELKSYR 118 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S + N DE G YLFSG + ++ AG Sbjct: 119 DSIESSFNAQDEEGHYLFSGTQTDTPAVSN----------------------------AG 150 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V + +++ K + + + E +++ N+ Sbjct: 151 GAYQVDGNSDKRVVTVAKGV--------------------TMDSNMTAKEILELGGGDNV 190 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 + + + EF + + LS + L+ ++ +G N++ Sbjct: 191 -----LNQIDALIAEFENPSPN---FQAEVDASLSAIDDTLANVLGAMTEIGGRHNNLDL 242 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 +D S ++ A +LS + ++ + K+ L++ + Sbjct: 243 MDSAHGENKLFVDKVTSDLSALDYGEASVRLSNYMAALQATQASYVKINDLNLFD 297 >gi|320459477|dbj|BAJ70098.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 896 Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 74/265 (27%), Gaps = 12/265 (4%) Query: 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114 K A + + K S L+ Q Q LV L T + + A Sbjct: 206 LADAKQTTASLKQTVAAAQKASRQSGTLLAETQAGSQAFSTTLVGAL--DTSSAQLSGLA 263 Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENS 174 + ++ S N N+ PLN T S K + + G + Sbjct: 264 VHVNNAAGSITGSFNSAQNSVDTI--TNTLSAPLNATQTSISDLKNALTKAGIGKDTTDP 321 Query: 175 KSLLAGQHLEV--SSMNAQ--QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 + ++ S ++ Q Q+ F + + N S A + I Sbjct: 322 AGQNIWKQIDALDSLISKQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIAALN 381 Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEF-LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRA 289 S + + + + T + + + Q + + + + Sbjct: 382 TARGSLT--GTVMPSLTSSLNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKT 439 Query: 290 VLGISEKNINE-ERVFLQNKNNIID 313 + ++ ++ + + +I Sbjct: 440 TISSTQDSLRQVASDVATVRTDIAT 464 >gi|311992307|gb|ADQ26727.1| flagellar hook-filament junction protein at filament [Aeromonas hydrophila] Length = 401 Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats. Identities = 49/399 (12%), Positives = 124/399 (31%), Gaps = 47/399 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+T+ +++R N+ +E+++TG + + ++ L +E + + Sbjct: 2 ITTNMVYDRNISSLNGANERLSTAYEQLMTGNKFKTAGEDPSGMSQKLALTKEIDLFKQY 61 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + SL+ L + L+++ + + D + A L + Sbjct: 62 GVNGSLLENSLGHEETVLTALNTAMTSAQTLIQKSNNSAMDLEERKAIASELEGLQKQMF 121 Query: 126 TFANM-TDEGQYLFSGINSSEKPL-----NGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 N +G+Y+F G S +P Y + +++ + N Sbjct: 122 DLMNSKNSQGEYIFGGNQSKTQPFIKDASGNYVFQGDTGQRNIQVSPTVQIPANDSGFNL 181 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNW--SNASDHNIKYRIKDT----EGID 233 + + ++ + + D+ + D ++ NN+ S AS+ I T E D Sbjct: 182 FEIVPTRRTSSAGSANIQVGVADQGNFDSFYRNNYDSSLASNQYTVNTIAGTPDTYEIRD 241 Query: 234 VS---------ANVNMRGIRDIMFVAVI--------------------------GTEFLS 258 N + + T Sbjct: 242 GGGALLQSGDYVAGNKIPFNGLELTLSLPAGGAAQNFVLDPPQNNNILDGMSDFITALRD 301 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 N+T + + ++ + + +G + + + + + +K Sbjct: 302 PNITPDTFQLKVADATAHMKNARQNMDQGLGEIGGRMNGLEQVMGSNEGLSTLNQQARAK 361 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + A LS + + + +K+ KL++ +Y+ Sbjct: 362 VSEADLYEVIATLSKEDAALSATQLSFSKISKLTLFDYI 400 >gi|261209256|ref|ZP_05923648.1| regulatory protein [Enterococcus faecium TC 6] gi|289566005|ref|ZP_06446443.1| regulatory protein [Enterococcus faecium D344SRF] gi|294616191|ref|ZP_06695988.1| DNA-binding response regulator [Enterococcus faecium E1636] gi|260076802|gb|EEW64537.1| regulatory protein [Enterococcus faecium TC 6] gi|289162203|gb|EFD10065.1| regulatory protein [Enterococcus faecium D344SRF] gi|291590946|gb|EFF22658.1| DNA-binding response regulator [Enterococcus faecium E1636] Length = 209 Score = 44.3 bits (103), Expect = 0.031, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 55/142 (38%), Gaps = 9/142 (6%) Query: 71 LVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN------KFPINAGMLRDSYESF 124 L R+ Q + + ++I+ +++LL D + +++ + ++ Sbjct: 52 LTDIRMPK-QTGIDAAKEILAKFPKAILLLLATFKDEEYIREAFSIGVKGYLIKQNLQAI 110 Query: 125 VTFANMTDEGQYLFSG--INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 + GQ +F I + + + T DS A SF + ++E + + Sbjct: 111 IPSVKSAYNGQAVFGNEIIETFTQMMKNKPTIDSHAYASFSERELAIIKEVAAGKNNKEI 170 Query: 183 LEVSSMNAQQMTDFIKQLEDKF 204 + ++ + ++I QL +K Sbjct: 171 ADALYLSDGTVRNYISQLLEKL 192 >gi|92114091|ref|YP_574019.1| flagellar hook-associated protein FlgL [Chromohalobacter salexigens DSM 3043] gi|91797181|gb|ABE59320.1| flagellin-like protein [Chromohalobacter salexigens DSM 3043] Length = 410 Score = 44.3 bits (103), Expect = 0.031, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 63/159 (39%), Gaps = 1/159 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST +++E+ ++ + + +++ +G+ + Q A++ Sbjct: 3 ISTVTMYEQGVSAMNRQQQNFMDVGQQIASGKRVVNPSDDPRAAARAVSVSQSLAVNAQQ 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 S LS ++ L+S+ + +V G + A L ++E+ V Sbjct: 63 ESSRVTARNSLSQEESVLNSVSDAIGSAKSLVVQAGNGTLSDADRESLASDLEGAFETLV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFD 163 AN TD G YLFSG + K + D++ S++ Sbjct: 123 GLANTTDGNGTYLFSGYQDNAKAFSRTDAGDAVDTISYE 161 >gi|153831579|ref|ZP_01984246.1| flagellar hook-associated protein 3 [Vibrio harveyi HY01] gi|148872089|gb|EDL70906.1| flagellar hook-associated protein 3 [Vibrio harveyi HY01] Length = 299 Score = 44.3 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 116/355 (32%), Gaps = 65/355 (18%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTG----QSSDYGLQLGARVTSILEWEQEKNH 61 IS S + M + N + ++M TG + SD + +L E+E + Sbjct: 3 ISDSQFSQMMLQSLQTNNAGLGHVLQQMATGDRLTKLSDDPMA----SIKLLNLERENSA 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + + + LS + HL S+ + ++ + ++ G + L+ Sbjct: 59 IGQYQSNIANLKTTLSAQETHLDSVNESLKSVRDLVLWGANGTLTDEDRSGMIIELKSYR 118 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S + N DE G YLFSG + ++ AG Sbjct: 119 DSIESSFNAQDEEGHYLFSGTQTDTPAVSN----------------------------AG 150 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V + +++ K + + + E +++ N+ Sbjct: 151 GAYQVDGNSDKRVVTVAKGV--------------------TMDSNMTAKEILELGGGDNV 190 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 + + + EF + + LS + L+ ++ +G N++ Sbjct: 191 -----LNQIDALIAEFENPSPN---FQAEVDASLSAIDDTLANVLGAMTEIGGRHNNLDL 242 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 +D S ++ A +LS + ++ + K+ L++ + Sbjct: 243 MDSAHGENKLFVDKVTSDLSALDYGEASVRLSNYMAALQATQASYVKINDLNLFD 297 >gi|257882181|ref|ZP_05661834.1| regulatory protein [Enterococcus faecium 1,231,502] gi|294621968|ref|ZP_06701113.1| DNA-binding response regulator [Enterococcus faecium U0317] gi|257817839|gb|EEV45167.1| regulatory protein [Enterococcus faecium 1,231,502] gi|291598447|gb|EFF29519.1| DNA-binding response regulator [Enterococcus faecium U0317] Length = 197 Score = 44.3 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 55/142 (38%), Gaps = 9/142 (6%) Query: 71 LVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN------KFPINAGMLRDSYESF 124 L R+ Q + + ++I+ +++LL D + +++ + ++ Sbjct: 40 LTDIRMPK-QTGIDAAKEILAKFPKAILLLLTTFKDEEYIREAFSIGVKGYLIKQNLQAI 98 Query: 125 VTFANMTDEGQYLFSG--INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 + GQ +F I + + + T DS A SF + ++E + + Sbjct: 99 IPSVKSAYNGQAVFGNEIIETFTQMMKNKPTIDSHAYASFSERELAIIKEVAAGKNNKEI 158 Query: 183 LEVSSMNAQQMTDFIKQLEDKF 204 + ++ + ++I QL +K Sbjct: 159 ADALYLSDGTVRNYISQLLEKL 180 >gi|238752860|ref|ZP_04614325.1| Flagellar hook-associated protein [Yersinia rohdei ATCC 43380] gi|238708899|gb|EEQ01152.1| Flagellar hook-associated protein [Yersinia rohdei ATCC 43380] Length = 302 Score = 44.3 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 51/125 (40%), Gaps = 2/125 (1%) Query: 54 EWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN 113 + EQE++ I + + + + LS + +++++ + D+ L+ + Sbjct: 45 QLEQEQSAIEQYQQNITRLNNSLSKQEKSVTALKNELTDIKDELLSAASDSRGSLDMASY 104 Query: 114 AGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEE 172 + E+ VTF N G+Y+FSG N+ P+ Y S + + + Sbjct: 105 GNSIGARLETIVTFLNSKSGEGRYIFSGTNTDTSPV-SYDATTSEYSYAGNSDYRETTTA 163 Query: 173 NSKSL 177 N S+ Sbjct: 164 NGISV 168 >gi|260222475|emb|CBA32076.1| hypothetical protein Csp_D30310 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 436 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 56/174 (32%), Gaps = 8/174 (4%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 S ++ ++ L+K L E + +G+ + IA Sbjct: 10 SANAYDNALSNLSKR-QTALSNLQENLTSGKRVVRPSDDPTAAAQAERSLMRLSRIATDQ 68 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + + ++ +++ L + +Q +V G + A L+ E + Sbjct: 69 RALEVQRNTMANAESTLGDVVDALQQFRELVVSAGNGSHTAAERQTIANQLQGLREQILG 128 Query: 127 FAN-MTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 +AN GQ LF + S+ P G + D G + + S A Sbjct: 129 YANRTDTNGQPLFGALASASVPFTG------PTATAPDYTYNGLPGQTATSETA 176 >gi|206974876|ref|ZP_03235791.1| putative flagellar hook-associated protein FlgL [Bacillus cereus H3081.97] gi|229195952|ref|ZP_04322705.1| Flagellar hook-associated protein 3 [Bacillus cereus m1293] gi|206746895|gb|EDZ58287.1| putative flagellar hook-associated protein FlgL [Bacillus cereus H3081.97] gi|228587511|gb|EEK45576.1| Flagellar hook-associated protein 3 [Bacillus cereus m1293] Length = 287 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 55/164 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNANWAKNQLMDLNAQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS ++ LS + K + + L G + + + V Sbjct: 63 QKDIADSKNVLSQTENTLSGIVKSLTRADQLTIQALNGPNGEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGF 169 AN ++G+YLF G ++ + P T K ++ G+ Sbjct: 123 YLANTKEQGRYLFGGNSAEKPPFADDGTYQGGEKDVMWKLNDGY 166 >gi|220917709|ref|YP_002493013.1| flagellar hook-associated protein 3 [Anaeromyxobacter dehalogenans 2CP-1] gi|219955563|gb|ACL65947.1| flagellar hook-associated protein 3 [Anaeromyxobacter dehalogenans 2CP-1] Length = 294 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 36/130 (27%), Gaps = 2/130 (1%) Query: 21 ELNKDSVKLHEEMVTG-QSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTS 79 + + + +G + G GA I + + + + + L+ Sbjct: 18 QARARLDRAVAQAASGVRVVHPGDDPGA-AARIAAERVKVQRMDAIATATARASDELAAV 76 Query: 80 QAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFS 139 A L + + + D + A +R S V + +YL Sbjct: 77 DAALGEVANGLARAQELATMFASAPYDAAQRAAGAREVRGILASAVASLGVKVGNRYLLG 136 Query: 140 GINSSEKPLN 149 G P + Sbjct: 137 GFRDGAPPFD 146 >gi|117620800|ref|YP_857336.1| flagellar hook-associated protein FlgL [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562207|gb|ABK39155.1| flagellar hook-associated protein 3 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 402 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 46/401 (11%), Positives = 114/401 (28%), Gaps = 51/401 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+T+ +++R N+ +E+++TG + + ++ L +E + + Sbjct: 3 ITTNMVYDRNISSLNGANERLSTAYEQLMTGNKFKTAGEDPSGMSQKLALTKEIDLFKQY 62 Query: 66 LHSNSLVTKRL---STSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + SL+ L T L++ Q ++ G D L+ Sbjct: 63 GVNGSLLENSLGHEETVLTALNTAMTSAQTLIQKANDSAVGYEDRQAIASELEGLQKQMF 122 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPL----------------NGYFTKDSLAKKSFDQML 166 + N G+Y+F G S +P ++ + D Sbjct: 123 DLMNSKNSQ--GEYIFGGNQSKTQPFIQDASGNYVFQGDTGQRNIQVSPTVQIAANDSGF 180 Query: 167 QGF--LEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY 224 F + S +++V + F + D + N + + Sbjct: 181 NLFEIVPTRRTSSAGSANIQVGVADQGHFDSFYRNNYDPSLASNQYTVNTIAGTPDTYEI 240 Query: 225 RIKDTEGIDVS--ANVNMRGIRDIMFVAVI--------------------------GTEF 256 R + N + + T Sbjct: 241 RDGGGALLQSGDYVAGNKIPFNGLELTLSLPAGGAAQNFVLDPPQNNNILDGMSDFITAL 300 Query: 257 LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYI 316 N+T + + ++ + + +G + + + + + Sbjct: 301 RDPNITPDTFQLKVADATAHMKNARLNVDQGLGEIGGRMNGLEQVMGSNEGLSTLNQQAR 360 Query: 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +K + + A LS + + + +K+ KL++ +Y+ Sbjct: 361 AKVSEADLYEVIATLSKEDAALSATQLSFSKISKLTLFDYI 401 >gi|209551493|ref|YP_002283410.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537249|gb|ACI57184.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 389 Score = 43.9 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 53/131 (40%), Gaps = 8/131 (6%) Query: 226 IKDTEGIDVSANVNMRGIRDIMFV-AVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGI 284 ++DT I+ S+ + ++ ++T + L L+ V+ L + Sbjct: 254 VRDTGAIETSSGIIGTAFNGTYGGTFIVMASIYDLDITGFTQGQL-DSALTGVELVLGAM 312 Query: 285 IEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMI 344 + LG I + F+ ++ ID+ + + + + ++LS L + +++ Sbjct: 313 TAAGSALGSISTRIQLQENFVSGLHDSIDSGVGRLVDADMEEESSKLSALQTQQQLA--- 369 Query: 345 TTKLQKLSILN 355 +Q LSI N Sbjct: 370 ---VQSLSIAN 377 >gi|319944128|ref|ZP_08018406.1| flagellar hook-associated protein 3 [Lautropia mirabilis ATCC 51599] gi|319742622|gb|EFV95031.1| flagellar hook-associated protein 3 [Lautropia mirabilis ATCC 51599] Length = 299 Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++++ + E KL ++ TGQ + + ++ Sbjct: 4 VASNQFRNQAVQTITEQQATIAKLQQQASTGQKVNRPSDDPLAAAEVERLRSDQARTNIE 63 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 S +++ +++ L + + +Q ++ G + AG L + Sbjct: 64 KRMMSFAKSQMAQAESLLGNGIETLQRARDLMISARNGVMNREDRETIAGQLMQYRIELL 123 Query: 126 TFAN-MTDEGQYLFSGINSSEKPL 148 AN T +G Y+F G S P Sbjct: 124 DIANQQTQDGNYIFGGSGSEHAPF 147 >gi|291516641|emb|CBK70257.1| YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain [Bifidobacterium longum subsp. longum F8] Length = 883 Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 74/265 (27%), Gaps = 12/265 (4%) Query: 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114 K A + + K S L+ Q Q LV L T + + A Sbjct: 199 LADAKQTTASLKQTVAAAQKASRQSGTLLTETQAGSQAFSTTLVGAL--DTSSAQLSGLA 256 Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENS 174 + ++ S N N+ PLN T S K + + G + Sbjct: 257 VHVNNAAGSITGSFNSAQNSVDTI--TNTLSAPLNATQTSISDLKDALTKAGIGKDTTDP 314 Query: 175 KSLLAGQHLEV--SSMNAQ--QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 + ++ S ++ Q Q+ F + + N S A + I Sbjct: 315 VGQNIWKQIDALDSLISKQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIAALN 374 Query: 231 GIDVSANVN-MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRA 289 S M I + L LT + + Q + + + + Sbjct: 375 TARGSLTGTVMPSITSSLNSFAALNGTLDGTLTS--LSGTLDQADGLFDQLVDTLNQTKT 432 Query: 290 VLGISEKNINE-ERVFLQNKNNIID 313 + ++ ++ + + +I Sbjct: 433 TISSTQDSLRQVASDVATVRTDIAT 457 >gi|256833256|ref|YP_003161983.1| flagellar hook-associated protein 3 [Jonesia denitrificans DSM 20603] gi|256686787|gb|ACV09680.1| flagellar hook-associated protein 3 [Jonesia denitrificans DSM 20603] Length = 305 Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 100/356 (28%), Gaps = 57/356 (16%) Query: 6 ISTSSIFERMNILTKELNKD---SVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHI 62 IS + + + K+ KL E+ +G+ AR + + E+ Sbjct: 2 ISRVTQQSAQRSVLANMQKNLSAMAKLQEQASSGKKIAKVSDDPARASDSMSLRAERAAT 61 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVG-PLVILLEGKTDNNKFPINAGMLRDSY 121 + + L+ + L+S +++ + G A + Sbjct: 62 QQYTRNAQDGLSWLNVIDSSLTSTASMLRRARDLTVQGSNLGTMSAQAREAVAAEIDGIK 121 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 + AN G+ +F+G S A +F+ G+ + + Sbjct: 122 AGIMEQANTQYLGRSVFAGT--------------SSAGHAFEDTGTGYAFTGAAGTSVER 167 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 + A +T + D TE S N N+ Sbjct: 168 RI------AADVTVRVDADGASVFGDP--------------------TETDPASPNYNV- 200 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 + + I + A N L + + ++ +G + Sbjct: 201 ----FVLLDDIANTLRTGGDPQSALNQLDTR--------IDAVLNTATTVGARTNQVESA 248 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 K+ + T IS ++ L + S + ++ + ++L++L Sbjct: 249 ISLTSYKSETLRTDISSVEDIDLAQTIMDLKLQEVAYQSSLNASARVLQPTLLDFL 304 >gi|90418386|ref|ZP_01226298.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1] gi|90338058|gb|EAS51709.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1] Length = 322 Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 109/353 (30%), Gaps = 45/353 (12%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I+T+ + N+ + TG A + + ++ Sbjct: 2 TSINTNIAAMAALQTLQATNRSMDATQNRISTGFRVAEAKDNAAYWSIATTMRSDNKALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 S L ++ + L S +V ++ LV E D K L+ +S Sbjct: 62 AVEDSLGLGAAKVDIAYTALESAIDVVDEIKAKLVAASEPGVDKTKIQSEISELKKQLQS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ-H 182 + A+ FSG N + D+ ++ F +++ ++ G Sbjct: 122 IASSAS--------FSGEN--------WLQNDASVAAGSKDIVASFNRDSTGAVSIGTIT 165 Query: 183 LEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRG 242 ++V++M + + K + + +A+D+ + Sbjct: 166 VDVTAMTLIGTVNETTGVLTKNYHADGISTPIGDATDYVLLD------------------ 207 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 LT + M+ V L + A LG ++ I ++ Sbjct: 208 ----AGATGTAASGTEIALTGTTTTLEISSMIKVVDAILKDMTNVAANLGAAKSRIELQQ 263 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ N + I + I + + +L L + ++ +Q LSI N Sbjct: 264 NFVSNLTDSISSGIGALVDADMTEESTRLKALQTQQQLG------VQALSIAN 310 >gi|269960123|ref|ZP_06174499.1| flagellar hook-associated protein 3 [Vibrio harveyi 1DA3] gi|269835094|gb|EEZ89177.1| flagellar hook-associated protein 3 [Vibrio harveyi 1DA3] Length = 299 Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 116/355 (32%), Gaps = 65/355 (18%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTG----QSSDYGLQLGARVTSILEWEQEKNH 61 IS S + M + N + ++M TG + SD + +L E+E + Sbjct: 3 ISDSQFSQMMLQSLQTNNAGLGHVLQQMATGDRLTKLSDDPMA----SIKLLNLERENSA 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + + + LS + HL S+ + ++ + ++ G + L+ Sbjct: 59 IGQYQSNIANLKTTLSAQETHLDSVNESLKSVRDLVLWGANGTLTDEDRSGMVIELKSYR 118 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S + N DE G YLFSG + ++ AG Sbjct: 119 DSIESSFNAQDEEGHYLFSGTQTDTPAVSN----------------------------AG 150 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 +V + +++ K + + + E +++ N+ Sbjct: 151 GAYQVDGNSDKRVVTVAKGV--------------------TMDSNMTAKEILELGGGDNV 190 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 + + + EF + + LS + L+ ++ +G N++ Sbjct: 191 -----LNQIDALIAEFENPSPN---FQAEVDASLSAIDDTLANVLGAMTEIGGRHNNLDL 242 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 +D S ++ A +LS + ++ + K+ L++ + Sbjct: 243 MDSAHGENKLFVDKVTSDLSALDYGEASVRLSNYMAALQATQASYVKINDLNLFD 297 >gi|222147580|ref|YP_002548537.1| flagella associated protein [Agrobacterium vitis S4] gi|221734568|gb|ACM35531.1| flagella associated protein [Agrobacterium vitis S4] Length = 320 Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 116/352 (32%), Gaps = 44/352 (12%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T++ + ++ D + +G + A + + + Sbjct: 2 TSIMTNNAAISALSTLRSISSDMETTQSRISSGYKVESASDNAAYWSIATTMRSDNKALG 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L + T+ + S +V D+ LV E D +K L++ S Sbjct: 62 AVEDAIGLGAAKTDTAYTGMESAISVVSDIKAKLVAAREPGVDKDKINKELTELKNQLGS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A + G+ + +S + + +M+ F+ N ++ Sbjct: 122 VAKSA--SFNGE--------------NWLYDNSDSTGTTQEMVGSFVRGN------DGNV 159 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + +++ + E D + A+ + + S N Sbjct: 160 SIKTISFDTTNSILINDEA---GDGGLLTKGTVATYAYGTTTTTASYYLISSVAGNTSSA 216 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 ++ + + + M+++V + L+ + + A +G + + + Sbjct: 217 SEVTLTSTTTDDEIDG-------------MVASVDKMLTSMTDAAATIGATTSRLKLQDS 263 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+++ ++ IDT + + + + + +L L + ++ +Q LSI N Sbjct: 264 FIKDLSDTIDTGVGRLVDADMNEESTKLKALQTQQQLG------IQSLSIAN 309 >gi|257890986|ref|ZP_05670639.1| response regulator [Enterococcus faecium 1,231,410] gi|257827346|gb|EEV53972.1| response regulator [Enterococcus faecium 1,231,410] Length = 202 Score = 43.9 bits (102), Expect = 0.036, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 55/142 (38%), Gaps = 9/142 (6%) Query: 71 LVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN------KFPINAGMLRDSYESF 124 L R+ Q + + ++I+ +++LL D + +++ + ++ Sbjct: 52 LTDIRMPK-QTGIDAAKEILAKFPKAILLLLTTFKDEEYIREAFSIGVKGYLIKQNLQAI 110 Query: 125 VTFANMTDEGQYLFSG--INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 + GQ +F I + + + T DS A SF + ++E + + Sbjct: 111 IPSVKSAYNGQAVFGNEIIETFTQMMKNKPTIDSHAYASFSERELAIIKEVAAGKNNKEI 170 Query: 183 LEVSSMNAQQMTDFIKQLEDKF 204 + ++ + ++I QL +K Sbjct: 171 ADALYLSDGTVRNYISQLLEKL 192 >gi|153839998|ref|ZP_01992665.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus AQ3810] gi|149746458|gb|EDM57467.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus AQ3810] Length = 397 Score = 43.9 bits (102), Expect = 0.036, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 11/168 (6%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQ 57 T IS+ ++ + + E++ +G+ SD L I Q Sbjct: 1 MLTRISSFHNYQSVQNDLRRQENKIHHNQEQLASGKKLLKPSDDPLA----AHYIQNIGQ 56 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 ++ + + L S LV RL + ++++ + + + ++ G L Sbjct: 57 QQEQLKQYLSSIVLVRNRLENHEVNIANAESFADESKRLTMEMINGAFSAEDRQAKKREL 116 Query: 118 RDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ 164 + + + N D G Y+F+G +P Y KD + + D Sbjct: 117 EEIANNLLNLVNAQDESGNYVFAGTKPKSQPF--YRDKDGSVQYAGDD 162 >gi|325291954|ref|YP_004277818.1| flagellin protein FlaD [Agrobacterium sp. H13-3] gi|45479288|gb|AAS66690.1| FlaD [Agrobacterium sp. H13-3] gi|325059807|gb|ADY63498.1| flagellin protein FlaD [Agrobacterium sp. H13-3] Length = 430 Score = 43.9 bits (102), Expect = 0.036, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 7/111 (6%) Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 ++ VA + F A + + M+S V + L + + LG + IN + F Sbjct: 316 NLDVVAAAMSGFSGGTTNYTASDAI-DVMMSFVDKQLEAMTSTASSLGSLQSRINMQENF 374 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + ++ID I + + + + +L L + ++ +Q LSI N Sbjct: 375 VSTLMDVIDKGIGRLVDADMNEESTRLKALQTQQQLG------IQALSIAN 419 >gi|33592486|ref|NP_880130.1| flagellar hook-associated protein FlgL [Bordetella pertussis Tohama I] gi|33572132|emb|CAE41674.1| flagellar hook-associated protein 3 [Bordetella pertussis Tohama I] gi|332381903|gb|AEE66750.1| flagellar hook-associated protein FlgL [Bordetella pertussis CS] Length = 510 Score = 43.9 bits (102), Expect = 0.036, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 59/159 (37%), Gaps = 4/159 (2%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ I++ +L E++ +G+ + Q + + Sbjct: 3 LSTALIYQNGLNGVLNQEAAMARLQEQLSSGRRVLTPADDPLAAALAINVSQTSSMNSNY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L L S+ K +Q+M+ +V G + L+ + E V Sbjct: 63 DANRKQAEQALGAQTNTLQSVVKNMQEMLKRVVEAGNGTMSDADRQALVIALKGAREELV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFD 163 AN TD GQYLFSG +P Y + K +++ Sbjct: 123 GLANATDGNGQYLFSGYKGFTQP---YSFDAATGKVTYN 158 >gi|187918056|ref|YP_001883619.1| flagellar hook-associated protein FlgL [Borrelia hermsii DAH] gi|119860904|gb|AAX16699.1| flagellar hook-associated protein 3 [Borrelia hermsii DAH] Length = 423 Score = 43.9 bits (102), Expect = 0.037, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 43/99 (43%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 NL + ++ + L+ + + L+ I A LG E ++ + + + + K Sbjct: 324 DNLEENREELIGSRSLAEIDESLNKIFATLADLGTKENRLDLSYERISKEIMDMKDDMVK 383 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A L+ ++S ++ ++ + ++L++L Sbjct: 384 YTNLDVTKAITDLNMTSLAYQVSLGVSARIMQTTLLDFL 422 >gi|42780832|ref|NP_978079.1| flagellar hook-associated protein FlgL [Bacillus cereus ATCC 10987] gi|42736752|gb|AAS40687.1| flagellar hook-associated protein FlgL, putative [Bacillus cereus ATCC 10987] Length = 287 Score = 43.9 bits (102), Expect = 0.037, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 55/164 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNANWAKNQLMDLNAQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS ++ LS + K + + L G + + + V Sbjct: 63 QKDIADSKNVLSQTENTLSGIVKSLTRADQLTIQALNGPNGEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGF 169 AN ++G+YLF G ++ + P T K ++ G+ Sbjct: 123 YLANTKEQGRYLFGGDSAEKPPFADDGTYQGGEKDVMWKLNDGY 166 >gi|327254561|gb|EGE66177.1| flagellar hook-associated protein 3 [Escherichia coli STEC_7v] Length = 309 Score = 43.9 bits (102), Expect = 0.037, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 102/351 (29%), Gaps = 51/351 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ + + E+M TG+ T I + ++++ I + Sbjct: 3 VTTQQTYVSMTQSFNNLSGELAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + ES V Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ + NS Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVALDDDGDGVTDSYS------YQGNSDHRQTTVSNG 176 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V ++DF D + Sbjct: 177 VEVDTNVAVSDFFGSNLDVLNTLNS----------------------------------- 201 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTK--KMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 + E N+ V + ++ V + A LG ++ ++ Sbjct: 202 -------LSQELQDPNVDPADPQVQSDIQNAVNVVDTASDDLNASIASLGETQNTMSMLS 254 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 255 DAQTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 305 >gi|259907641|ref|YP_002647997.1| Flagellar hook-associated protein 3, FlgL [Erwinia pyrifoliae Ep1/96] gi|224963263|emb|CAX54747.1| Flagellar hook-associated protein 3, FlgL [Erwinia pyrifoliae Ep1/96] gi|283477484|emb|CAY73400.1| Flagellar hook-associated protein 3 FlgL [Erwinia pyrifoliae DSM 12163] Length = 302 Score = 43.9 bits (102), Expect = 0.038, Method: Composition-based stats. Identities = 40/316 (12%), Positives = 92/316 (29%), Gaps = 69/316 (21%) Query: 47 ARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKI-VQDMVGPLVILLEGKT 105 + + + + S + + LSS+ K+ +++ LV + G Sbjct: 44 GGAADAVILQNALAKMELYKDARSGARSGMEQEDSTLSSVGKLLTKNLSEKLVAAMNGTL 103 Query: 106 DNNKFPINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ 164 + + ++ + AN D G+Y+FSG + + Sbjct: 104 SEEDRAVLGQEIEGISKNLLDLANTRDGSGRYVFSGFKTGTAAFDE-------------- 149 Query: 165 MLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY 224 + N + H V+ + Q++ + + + + N S AS Sbjct: 150 ------QGNYQGGDTAIHQTVADGSDMQISHLGSDIFMSGTSSDLFKNLQSAAS------ 197 Query: 225 RIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGI 284 E L + + V G+ + Sbjct: 198 ------------------------------ELTKSPLDEEQLKLALGAASKAVDAGIDRL 227 Query: 285 IEQRAVLGISEKNINEERVFLQNKNNI-IDTYISKSIGVEQHTAHAQLSTLINK------ 337 + +A LG + + L + + ++ + K V Q++ + Sbjct: 228 GKVQADLGTQLQQL----DALDIQADNDFNSIVGKLQSVLGADTSTQINLIQQTKMAEVV 283 Query: 338 IEMSYMITTKLQKLSI 353 +E S + +QK+S+ Sbjct: 284 MEASMKVFQSMQKMSL 299 >gi|291085836|ref|ZP_06354189.2| flagellar hook-associated protein 3 [Citrobacter youngae ATCC 29220] gi|291069995|gb|EFE08104.1| flagellar hook-associated protein 3 [Citrobacter youngae ATCC 29220] Length = 298 Score = 43.9 bits (102), Expect = 0.038, Method: Composition-based stats. Identities = 42/343 (12%), Positives = 103/343 (30%), Gaps = 53/343 (15%) Query: 15 MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 M +L+ D + +M TG+S T I E ++++ + + + T Sbjct: 1 MTQSFNDLSSDLSHVVTQMATGKSILLPSDDPIAATRITELNRQQSALDQYQTNIDSATA 60 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-E 133 +S ++ L + + + L+ G ++ E+ V N D + Sbjct: 61 GMSQQESILDGVNNDLLAIRDDLLEAANGTNTAESLSSLGQDIQSMTEAMVAALNYQDED 120 Query: 134 GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQM 193 G Y+F G + P+ S+ + NS+ V + Sbjct: 121 GHYVFGGTVNDRPPIVAVDDDGDGVTDSYS------YQGNSEHRQTTVSNGVEVDTNVAV 174 Query: 194 TDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIG 253 +DF D + + + S +++ Sbjct: 175 SDFFGDSLDVLNTLTSLSKELQDPSVDPADPQVQSD------------------------ 210 Query: 254 TEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISE---KNINEERVFLQNKNN 310 + + TV + A +G ++ ++ + + N+ Sbjct: 211 ----------------IQNAIDTVDVASDELNASIATIGETQNTMTMLSGAQTDISTSND 254 Query: 311 IIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + +S + A + L ++ + +K+ +L++ Sbjct: 255 QLISQLSDL---DYGPASITFTGLEMAMQATLKTYSKVSELNL 294 >gi|330830296|ref|YP_004393248.1| flagellar hook-associated protein 3 [Aeromonas veronii B565] gi|328805432|gb|AEB50631.1| Flagellar hook-associated protein 3 [Aeromonas veronii B565] Length = 402 Score = 43.9 bits (102), Expect = 0.038, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 51/143 (35%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+T+ I++R N+ ++++ TG + A ++ + +E + + Sbjct: 3 ITTNMIYDRNIYSLNSANERLNTAYQQLQTGNKFQTAGEDPAGMSQKMALTKEIDLFKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + SL+ L + L S+ + + G + A L + Sbjct: 63 SVNGSLLENSLGHEETVLDSLNTAMLSAQTLIQKSNNGAISMDDRKAIASELEGLQQQMF 122 Query: 126 TFANM-TDEGQYLFSGINSSEKP 147 N G+++F G S +P Sbjct: 123 DLMNSKNSSGEFIFGGNQSKTQP 145 >gi|332296508|ref|YP_004438431.1| flagellar hook-associated protein 3 [Thermodesulfobium narugense DSM 14796] gi|332179611|gb|AEE15300.1| flagellar hook-associated protein 3 [Thermodesulfobium narugense DSM 14796] Length = 291 Score = 43.9 bits (102), Expect = 0.039, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 51/125 (40%), Gaps = 1/125 (0%) Query: 25 DSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLS 84 K E+ +G + I+ ++++ N I ++ + L+++ + L+ Sbjct: 23 SIAKDSYELSSGNAIQLPQDNPVSNNYIMSFKEKINGINNYQNNITAGQSILNSTDSALT 82 Query: 85 SMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSS 144 S+ I+ + + + T+ + + +S ++ AN + Y+F+G SS Sbjct: 83 SISTILNNA-NTIALQGANVTNQDSLASLEKSVEALKQSLLSVANTSVGNTYIFAGSKSS 141 Query: 145 EKPLN 149 P + Sbjct: 142 SAPFS 146 >gi|205375050|ref|ZP_03227841.1| flagellar hook-associated protein FlgL [Bacillus coahuilensis m4-4] Length = 290 Score = 43.9 bits (102), Expect = 0.039, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 85/262 (32%), Gaps = 22/262 (8%) Query: 24 KDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 ++ +++ TG+ + + I + + S L +S++ + Sbjct: 21 NRLGQIQDQLATGKKITKPSDDPVVAMKGMYYRSNLTQIEQYKRNLSEGYLWLESSESAI 80 Query: 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINS 143 + +Q + V G ++ + ++ E AN G+YLF+G + Sbjct: 81 EQANQGLQRVRELTVQGQNGTLSDDDKKAISAEIQQIVEDLENTANTKVAGKYLFNGTDV 140 Query: 144 SEKPLNGYFTKDSLA-------KKSFDQMLQGFLEENSKSLLAGQHLEVSSM-----NAQ 191 +E P+ + + + + V + + Sbjct: 141 TESPIASSNPVTVATYGNKNYKIEVSENVFLDVSVNPNNVFSQKLFNTVQGIKDGLESGA 200 Query: 192 QMTDFIKQLEDKFS------DDEYWANNWSNASDHNIKYR-IKDTEGIDVSANVNMRGIR 244 + +F+ L+D S + N + + + I T+ + + NVN + Sbjct: 201 DLNNFLSDLDDVMSVMGAERSELGARYNRIEMVEQRLGSQEISATQILSDNENVN---ME 257 Query: 245 DIMFVAVIGTEFLSKNLTDGAR 266 + + ++ + L+ GAR Sbjct: 258 EAISELMMQEAVHNAALSTGAR 279 Score = 36.2 bits (82), Expect = 7.3, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 9/143 (6%) Query: 217 ASDHNIKYRIKDTEGI--DVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKML 274 A+ N Y+I+ +E + DVS N N +F V G + ++ D L Sbjct: 154 ATYGNKNYKIEVSENVFLDVSVNPNN-VFSQKLFNTVQGIKDGLESGAD------LNNFL 206 Query: 275 STVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTL 334 S + +S + +R+ LG I L ++ +S + V A ++L Sbjct: 207 SDLDDVMSVMGAERSELGARYNRIEMVEQRLGSQEISATQILSDNENVNMEEAISELMMQ 266 Query: 335 INKIEMSYMITTKLQKLSILNYL 357 + ++ + ++L++L Sbjct: 267 EAVHNAALSTGARIIQPTLLDFL 289 >gi|221069315|ref|ZP_03545420.1| flagellar hook-associated protein 3 [Comamonas testosteroni KF-1] gi|220714338|gb|EED69706.1| flagellar hook-associated protein 3 [Comamonas testosteroni KF-1] Length = 404 Score = 43.9 bits (102), Expect = 0.041, Method: Composition-based stats. Identities = 61/411 (14%), Positives = 124/411 (30%), Gaps = 62/411 (15%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSS-----DYGLQLGARVTSILEW 55 M I T+++++ V L E+ G+ D A Sbjct: 1 MSINRIGTANMYDSTINNLGSRQSSLVDLMEKTTAGKRVLRASDDPVAAAQAERARTRIT 60 Query: 56 EQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAG 115 E + + + ++ L +QD +V G D Sbjct: 61 RSENDQRVLGAQRDVIAQG-----ESELGKAHSALQDFRDLVVQAGNGSYDQVARDALVQ 115 Query: 116 MLRDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDS------------------ 156 + E + +AN D G +F G+ S + PL S Sbjct: 116 QMESLREQILGYANAKDSNGLPIFRGLGSPDTPLQSTPPGSSSQLNPGQNTGSDNGLPIS 175 Query: 157 ----LAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDF----IKQLEDKFSDDE 208 A + F+ + S +V S+ + +D + + Sbjct: 176 LDGHAAWLNVPTGNGVFVVNGAASNSGKAWADVGSVTDPSQVTGDSYTLVFTKDPTTGEI 235 Query: 209 YWANNWSNASDHN----------------------IKYRIKDTEGIDVSANVNMRGIRDI 246 + N S+A+ N IK D + +S + + Sbjct: 236 SYEINSSSATATNPVVAATPYKEGQAITVGGQQISIKGTPADGDSFTMSPSTRTDIFSVL 295 Query: 247 MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQ 306 I T + + L + LS + G++ + R+ G K + ++ Sbjct: 296 DQA--IATVKGGTGGSTALQQGL-GRALSELDSGMNRVQAMRSYAGDQLKRADSLESDMK 352 Query: 307 NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + S++ ++ TA +Q+ T ++ + ++QKLS+ NY+ Sbjct: 353 DQALTQEGARSRAEDIDMITALSQVETQKVGLQAALQSYAQMQKLSLFNYI 403 >gi|116618967|ref|YP_819338.1| hypothetical protein LEUM_1891 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097814|gb|ABJ62965.1| Predicted membrane protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 915 Score = 43.5 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 99/320 (30%), Gaps = 20/320 (6%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILE-WEQEKNHIAERLHSNSLVTKRLS 77 + + D+ + E +T + + L A VT+I + ++ I + L ++S Sbjct: 377 QLKTSLDNSNQNTEQIT-KLTSSMSSLAANVTTISDYISGTQSKIESVAKTQKLTDTQVS 435 Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDE---- 133 + L I + L E +T+ ++ ++ V N + Sbjct: 436 ALETALLPTDDINDSLKSATTNLSELQTNLTTLIKSSNTSMSQLKAAVNTLNTSYGTSDD 495 Query: 134 GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQM 193 + L+ GI+S LN + ++ G + + KS +Q+ Sbjct: 496 TKTLYGGISSLVGSLNKVGDSTAQLSTGATKLTSGLSQLSGKSAQLISGSTQLQEGLEQL 555 Query: 194 TD---FIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFV- 249 + + + ++ + N ++ I + + + Sbjct: 556 NTNVPSLTSGIESLASGSSKLSDGTQKLSQNSDKLNAGSQKISSGLSSLNEKMPALGSAT 615 Query: 250 --AVIGTEFLSKNLTDGARN--------VLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 G+ L+ L A N + + G + + + A LG + Sbjct: 616 SKLSSGSSQLTSGLDKLAANNSKLLSGSTQLASGATKIADGSAKLADGSAQLGDGLTKVK 675 Query: 300 EERVFLQNKNNIIDTYISKS 319 + L +K + ++K Sbjct: 676 DGNATLADKLGQANNKVNKI 695 >gi|163850117|ref|YP_001638160.1| flagellin domain-containing protein [Methylobacterium extorquens PA1] gi|163661722|gb|ABY29089.1| flagellin domain protein [Methylobacterium extorquens PA1] Length = 585 Score = 43.5 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 79/267 (29%), Gaps = 28/267 (10%) Query: 89 IVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPL 148 D+ V+ + +NA + AN G + + IN Sbjct: 336 TAMDVTTAKVLTVNDGAGVKTVTLNAASFSALGADATSAANTAVNGDDVAAMIN------ 389 Query: 149 NGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDE 208 + K + + F ++N + F D + Sbjct: 390 -------AQLKTAGSKARVSFGGGALSFGSNAGGSTTITLNGADVAGFGFTAADSTTGTS 442 Query: 209 YWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNV 268 + + A N K + + + + + +A + L Sbjct: 443 GFTGKGTAAGTTNAKGILDTVDATTTFSIGEIGTGGTGINIAGLVGTTGDTTL------- 495 Query: 269 LTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAH 328 K +++ V++ ++ + LG ++ I+ ++ F+ D I + + Sbjct: 496 --KNIITQVEKAIASVTNAGTKLGANKTQIDGQKTFVDTLMKANDRTIGTLVDADIEEES 553 Query: 329 AQLSTLINKIEMSYMITTKLQKLSILN 355 +L L + +++ +Q LSI N Sbjct: 554 TKLKALQTQQQLA------VQALSIAN 574 >gi|218778839|ref|YP_002430157.1| flagellar hook-associated protein 3 [Desulfatibacillum alkenivorans AK-01] gi|218760223|gb|ACL02689.1| Flagellar hook-associated protein 3 [Desulfatibacillum alkenivorans AK-01] Length = 290 Score = 43.5 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 57/146 (39%), Gaps = 5/146 (3%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 + IS++ F + T + + + +D L ++ + +++ Sbjct: 6 SIISSNVTFGLGRLTTAMDRANLTIASQRQIL-TMADDPSAL----LQVMNLRSDMSYVD 60 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + + + L+ S++ L++++ ++ ++ V + ++ A ++ E+ Sbjct: 61 QLNRNIEMGRTWLTASESALTNVEDLITEVKLLTVQMGSDNVGADERQAAAEAVQGFLET 120 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLN 149 VT N T +Y+F+G + Sbjct: 121 AVTLGNSTVGDRYIFAGSQNDSPAFT 146 >gi|296274001|ref|YP_003656632.1| flagellar hook-associated protein FlgL [Arcobacter nitrofigilis DSM 7299] gi|296098175|gb|ADG94125.1| flagellar hook-associated protein FlgL [Arcobacter nitrofigilis DSM 7299] Length = 372 Score = 43.5 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 108/362 (29%), Gaps = 31/362 (8%) Query: 22 LNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQA 81 LN+ +++ + T + D G + L E + N T + S + Sbjct: 15 LNQQQLRVSYQQSTQKKIDDGSDDSVVYSQQLFLEDKINVYDGLKTQVQNTTAQNKVSDS 74 Query: 82 HLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGI 141 L +++K + ++ ++ D A + + ++ T N + +Y+FSG Sbjct: 75 TLDAIKKQLDEIKDEIIKGRNDTNDEISRKSIATQIEGAKKNLYTLVNERVQDEYIFSGS 134 Query: 142 NSSEKPLN-------GYFTKDSLAKKSFDQ---MLQGFLEENSKSLLAGQHLEVSSMNAQ 191 ++++ Y +L K + + +G + S + ++ + Sbjct: 135 ETNKQAFTQDANGKVSYNGNTTLRKSAVEVDSYRDRGVTGLDIMSYTTTAGVSGQPLSFK 194 Query: 192 QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSAN---------VNMRG 242 + I + ++ + D + + + N N G Sbjct: 195 EGERIIDENGREWKLNAAQTVLVEYDEDGKSTKNFIEVKTTGEAPNKVHEIAELPKNEDG 254 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVL-------TKKMLSTVQQGLSGIIEQRAVLGISE 295 + + + + D A L L ++ + LG Sbjct: 255 SQK-----TFTAKHNTFDAIDDAIKALRNNDGDGMSAALESLNNAWNAANTAHGELGARN 309 Query: 296 KNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 N + K ++ + + L Y +K KLS++N Sbjct: 310 ATFNAAEERITTKTTHFGVLAIQNDAADMTKVAIESQQLQLIYTSLYSSISKASKLSLVN 369 Query: 356 YL 357 YL Sbjct: 370 YL 371 >gi|269792280|ref|YP_003317184.1| flagellin domain-containing protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099915|gb|ACZ18902.1| flagellin domain protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 1008 Score = 43.5 bits (101), Expect = 0.046, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 49/145 (33%), Gaps = 23/145 (15%) Query: 17 ILTKELNKDSVKL---HEEMVTGQSS--------DYGLQLGARVT--SILEWEQEKNHIA 63 +L ++ + K+ +++ T + D L T +++ + + Sbjct: 13 MLLSDMQSNLAKMLEIQKQLATQKKFSRPSDNPIDVTRSLSMDTTITENVQYRRNLDD-- 70 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 L+ ++ + + Q + V +G + A L E Sbjct: 71 --------ALTWLNNTETAFDQITSVYQQVRQLAVYAGDGGLVDVDMGAIAEQLYQLQEE 122 Query: 124 FVTFANMTDEGQYLFSGINSSEKPL 148 AN EG++L SG+++ +P Sbjct: 123 MRNAANYEVEGRFLLSGLSTGVRPF 147 Score = 42.8 bits (99), Expect = 0.076, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 37/105 (35%) Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 + L + + R ++ +L V ++ R G + L+ N + Sbjct: 903 VMDDLINAVRNEDRRGISDHLLKKVTDWGDNLLRCRTECGALINRYENTQARLKQNNVNL 962 Query: 313 DTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 SK V+ A Q + S + ++ + +++++L Sbjct: 963 TELQSKISDVDLAEAATQFQMAQAVYQASLAVIARIIQPTLVDFL 1007 >gi|115612999|ref|XP_782530.2| PREDICTED: similar to conserved hypothetical protein [Strongylocentrotus purpuratus] gi|115936933|ref|XP_001180380.1| PREDICTED: similar to conserved hypothetical protein [Strongylocentrotus purpuratus] Length = 1481 Score = 43.5 bits (101), Expect = 0.046, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 41/127 (32%), Gaps = 12/127 (9%) Query: 50 TSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNK 109 + ++ + I SN+ T+RL + + ++ VQ + L + Sbjct: 51 AIDRQLKKLFDRIEGLEESNTATTERLEINDGRIMDLEANVQAKENEIKQLNSTISTQAT 110 Query: 110 FPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGF 169 N + + E ++F G + + +P K+ + LQ Sbjct: 111 TLNNLQLSVNDME------------YFVFLGTHCTSQPSTEDKDPPPFDKQPANAPLQEI 158 Query: 170 LEENSKS 176 +S+ Sbjct: 159 APPSSEP 165 >gi|294786151|ref|ZP_06751405.1| putative phage infection protein [Parascardovia denticolens F0305] gi|315227354|ref|ZP_07869141.1| YhgE/Pip domain protein [Parascardovia denticolens DSM 10105] gi|294484984|gb|EFG32618.1| putative phage infection protein [Parascardovia denticolens F0305] gi|315119804|gb|EFT82937.1| YhgE/Pip domain protein [Parascardovia denticolens DSM 10105] Length = 924 Score = 43.5 bits (101), Expect = 0.047, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 98/320 (30%), Gaps = 32/320 (10%) Query: 46 GARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKT 105 GAR I ++ K ++ + + ++ +L+TS L K + D+ + L Sbjct: 188 GARDDVISATDEAKTNVDSTQKALTALSTKLNTSLTSLDQASKTLTDLQTSVASLRRSVQ 247 Query: 106 DNNKFPINAGMLRDSYESFVTFANMT---------DEGQYLFSGIN----------SSEK 146 K NA ++ + + + + + + IN + + Sbjct: 248 ATRKLIANAQSSMVTFNNTTSSLLTSGASKLSSLAVQTSFSAAAINKALSDLSINATDAQ 307 Query: 147 P-LNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQ------QMTDFIKQ 199 L+G +++ +Q LQG L + +V+ + Q + F Sbjct: 308 AQLSGIVSRNDAIVTQLNQALQGSNLSKDSDLYKRLNQQVTQLQGQITAQKTALQSFSTT 367 Query: 200 LEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN-MRGIRDIMFVAVIGTEFLS 258 + + + N+++ + + N + + A T L Sbjct: 368 STSRLTAAQSGVRNFASNLSNAATTSANALNTANTQLTGNMSTALVSSLSSANALTGSLD 427 Query: 259 KNLTD-----GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 +L L +M ++Q S + LG K + L ++ Sbjct: 428 GSLASLQTSLAQAKALIGQMKGILKQTSSTLATTAGSLGSISKQLTSIHTDLVALDSAKS 487 Query: 314 TYISKSIGVEQHTAHAQLST 333 K I ++ ++ Sbjct: 488 WQRFKKISLDPQEISQFIAA 507 >gi|114706706|ref|ZP_01439606.1| flagellin C protein [Fulvimarina pelagi HTCC2506] gi|114537654|gb|EAU40778.1| flagellin C protein [Fulvimarina pelagi HTCC2506] Length = 424 Score = 43.5 bits (101), Expect = 0.048, Method: Composition-based stats. Identities = 33/296 (11%), Positives = 85/296 (28%), Gaps = 10/296 (3%) Query: 51 SILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDM-VGPLVILLEGKTDNNK 109 I + + + IA + + +S A +S + ++ L G + Sbjct: 111 EITQLQNQLKSIASSASFSGQNWLSIDSSAASYTSSKDMISSFSRSAGGSLSVGSIRVDT 170 Query: 110 FPINAGMLRDSYESFVTFANMTDEGQYLFSGIN---SSEKPLNGYFTKDSLAKKSFDQML 166 + + + L +G + ++ P + +F Sbjct: 171 SSFALFDASGTKSGIIDSGKVNMTAVTLGAGTSAAGTAGPPATSGTYTPAAPTAAFTLDS 230 Query: 167 QGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRI 226 + + G + + + D + + S +A ++ A D + Sbjct: 231 DDMISFTLA--VDGGTAQKVLITKGIIDDALGTTDGVVSS-ANYAKVFAKAVDFANVTGV 287 Query: 227 KDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLT---DGARNVLTKKMLSTVQQGLSG 283 V + + + F A + + V K ++ V +S Sbjct: 288 SVNATTGVVTSNSTGTTSTVAFAAGSSDSIGVSEMDITKSTVKTVDIKAYINIVDSAISK 347 Query: 284 IIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIE 339 + + LG + I+ + F+ N + + I + + +L L + + Sbjct: 348 VTAAASTLGSVKNRIDIQTSFVNNLMDTFEKGIGTLVDADMTEESTKLKALQTQQQ 403 >gi|312133693|ref|YP_004001032.1| membrane protein [Bifidobacterium longum subsp. longum BBMN68] gi|311772961|gb|ADQ02449.1| Hypothetical Membrane protein [Bifidobacterium longum subsp. longum BBMN68] Length = 906 Score = 43.5 bits (101), Expect = 0.049, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 74/265 (27%), Gaps = 12/265 (4%) Query: 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114 K A + + K S L+ Q Q LV L T + + A Sbjct: 228 LADAKQTTASLRQTVAAAQKASRQSGTLLAETQAGSQAFSTTLVGAL--DTSSAQLSGLA 285 Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENS 174 + ++ S N N+ PLN T S K + + G + Sbjct: 286 VHVNNAAGSITGSFNSAQNSVDTI--TNTLSAPLNATQTSISDLKDALTKAGIGKDTTDP 343 Query: 175 KSLLAGQHLEV--SSMNAQ--QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 + ++ S ++ Q Q+ F + + N S A + I Sbjct: 344 VGQNIWKQIDALDSLISKQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIAALN 403 Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEF-LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRA 289 S + + + + T + + + Q + + + + Sbjct: 404 TARGSLT--GTVMPSLTSSLNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKT 461 Query: 290 VLGISEKNINE-ERVFLQNKNNIID 313 + ++ ++ + + +I Sbjct: 462 TISSTQDSLRQVASDVATVRTDIAT 486 >gi|324325757|gb|ADY21017.1| flagellar hook-associated protein FlgL [Bacillus thuringiensis serovar finitimus YBT-020] Length = 287 Score = 43.5 bits (101), Expect = 0.049, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 55/164 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS ++ LS + K + + L G + + + V Sbjct: 63 QKDIADSKNVLSQTENTLSGIVKSLTRADQLTIQALNGPNGEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGF 169 AN ++G+YLF G ++ + P T K ++ G+ Sbjct: 123 YLANTKEQGRYLFGGNSAEKPPFADDGTYQGGEKDVMWKLNDGY 166 >gi|160878767|ref|YP_001557735.1| hypothetical protein Cphy_0609 [Clostridium phytofermentans ISDg] gi|160427433|gb|ABX40996.1| conserved hypothetical protein [Clostridium phytofermentans ISDg] Length = 772 Score = 43.5 bits (101), Expect = 0.050, Method: Composition-based stats. Identities = 33/290 (11%), Positives = 94/290 (32%), Gaps = 44/290 (15%) Query: 50 TSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEG------ 103 + ++ + N ++ ++ +S + + T Q ++S + V ++G + + Sbjct: 291 SGAVKLDTATNGLSSIVNGSSSLATGVDTLQNSITSYTQGVDSLLGNISDTTQALAAYAK 350 Query: 104 KTDNNKFPINAGMLRD--------SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKD 155 +T + L + + ++ + N L SGI++ L+ Sbjct: 351 QTGDPTITKIVANLTNEKNIANLNALKNASSALNTGVNS--LSSGIHT----LSDGAQNL 404 Query: 156 SLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWS 215 + K S ++ G + + A + + L ++ Sbjct: 405 TQLKNSITELKNGLISAKQGATSLALG-------AGNLNAGLNTLYSA-------GGEFT 450 Query: 216 NASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLS 275 A+ G+ +GI + + + L +GA + + ++ Sbjct: 451 KATSQLTIGATSLNNGLSSLT----KGIDTLAVGSTSLYN-GADKLNNGASS--LGEGMN 503 Query: 276 TVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 T+ G++ + + + L + I ++ N + G++ + Sbjct: 504 TLISGVTTLDDGASQL---KDGITTANEGVKTSINSASEQLKALEGLDTY 550 >gi|149201616|ref|ZP_01878590.1| flagellar hook-associated protein 3 FlgL [Roseovarius sp. TM1035] gi|149144664|gb|EDM32693.1| flagellar hook-associated protein 3 FlgL [Roseovarius sp. TM1035] Length = 412 Score = 43.5 bits (101), Expect = 0.050, Method: Composition-based stats. Identities = 47/413 (11%), Positives = 112/413 (27%), Gaps = 63/413 (15%) Query: 5 GISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAE 64 I TS ++N+ L ++ +G + R + ++++ + Sbjct: 2 SIGTSFFHNVTTRNLSQVNERISDLQGQISSGVNDPRPSADPVRALRLSAAKEQQEALDR 61 Query: 65 RLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 ++ RL + LS +++ + + + +R +S Sbjct: 62 YSNNLERAGARLDQADTVLSEAGNVMRRVGELALRAASDTATATERDSIGTEVRALRDSL 121 Query: 125 VTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + AN D G+ LF G + P D S SL G Sbjct: 122 LGLANARDESGRALFGGYGTQSDPFRD---GPGGVVYQGDGGQSRLQVSESLSLPTGLSG 178 Query: 184 EVSSMNAQQ-------MTDFIKQLEDKFSDDEYWANN----------------WSNASDH 220 + + + DF+ L S WS + Sbjct: 179 DAVFAIGSEGGDVFAVIDDFLASLGTASSAPRASVTGAGQLDLDLTLSRAPAAWSMTLEG 238 Query: 221 NIKYRIK----------------DTEGIDVSANVNMRG--------------IRDIMFVA 250 + + + + + + +I Sbjct: 239 PLGSTTIPFVAAEGAMSGAVEAINAQTAATGISAALDPETGGLMLTAQGDVKVSNIARAP 298 Query: 251 VIGTEFLSKNLTDGARNVLT------KKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 G + +G L ++ ++ +I+QR LG + + Sbjct: 299 DAGGVLMVARDAEGGTQALVPFARTRDAVIDRLRGASEHLIDQRTQLGALSADAARQSDV 358 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + N+ + +S ++ A +L + + + ++ + S+ ++L Sbjct: 359 IDNRKLAMSQAVSGLEDLDLANALTRLQQSMLTRDATQQAYVRITQQSLFDFL 411 >gi|197122917|ref|YP_002134868.1| flagellar hook-associated protein 3 [Anaeromyxobacter sp. K] gi|196172766|gb|ACG73739.1| flagellar hook-associated protein 3 [Anaeromyxobacter sp. K] Length = 294 Score = 43.5 bits (101), Expect = 0.051, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 36/130 (27%), Gaps = 2/130 (1%) Query: 21 ELNKDSVKLHEEMVTG-QSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTS 79 + + + +G + G GA I + + + + + L+ Sbjct: 18 QARARLDRAVAQAASGVRVVHPGDDPGA-AARIATERVKVQRMDAIATATARASDELAAV 76 Query: 80 QAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFS 139 A L + + + D + A +R S V + +YL Sbjct: 77 DAALGEVANGLARAQELATMFASAPYDAAQRAGGAREVRGILASAVASLGVKVGNRYLLG 136 Query: 140 GINSSEKPLN 149 G P + Sbjct: 137 GFRDGAPPFD 146 >gi|283784091|ref|YP_003363956.1| lateral flagellar hook associated protein 3 [Citrobacter rodentium ICC168] gi|282947545|emb|CBG87098.1| lateral flagellar hook associated protein 3 [Citrobacter rodentium ICC168] Length = 309 Score = 43.5 bits (101), Expect = 0.052, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 108/357 (30%), Gaps = 56/357 (15%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T + M +L+ D + +M TG+S T I + ++++ Sbjct: 1 MRVTAQQSYV---SMTRNFNDLSGDLAHVVTQMATGKSILLPSDDPIASTRITQLNRQQS 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 I + ++ + +S ++ L + + + L+ G + + Sbjct: 58 AIEQYQNNIDSASAGMSQQESILDGVNNALLSVRDDLLEAANGTNTADSLASLGQDIASL 117 Query: 121 YESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 ES V N D +G Y+F G + + P+ S+ G + + S Sbjct: 118 TESMVAALNYQDEDGHYVFGGTVNDKPPILAVDDDGDGVTDSYSYQGNGDHRQTTVSNGV 177 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 V+ ++DF D + + + S +I+ Sbjct: 178 EVDTNVA------VSDFFGSSLDVLNTLNALSQELQDPSLDPADPQIQSD---------- 221 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISE---K 296 + V Q + A LG ++ Sbjct: 222 ------------------------------IASAIDVVDQAADSLNASVASLGETQNTMT 251 Query: 297 NINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ + + N+ + +S + A + L +E + +K+ +L++ Sbjct: 252 MLSGAQTDIATSNDQLIGSLSDL---DYGPASITFTGLEMAMEATLKTYSKVSELNL 305 >gi|222147579|ref|YP_002548536.1| flagella associated protein [Agrobacterium vitis S4] gi|221734567|gb|ACM35530.1| flagella associated protein [Agrobacterium vitis S4] Length = 320 Score = 43.5 bits (101), Expect = 0.053, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 114/352 (32%), Gaps = 44/352 (12%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T++ + ++ D + +G + A + + + Sbjct: 2 TSIMTNTAAISALSTLRSISSDMETTQSRISSGYKVESASDNAAYWSIATTMRSDNKALG 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L + T+ + S +V D+ LV E D K L++ S Sbjct: 62 AVEDAIGLGAAKTDTAYTGMESAISVVSDIKAKLVAAREPGVDKEKINKELAELKNQLSS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A + GQ + +S + + +M+ F+ N ++ Sbjct: 122 VAKSA--SFNGQ--------------NWLYDNSDSTGTTQEMVGSFVRGN------DGNV 159 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + +++ + E D + A+ + + S N Sbjct: 160 SIKTISFDTTNSILINDEA---GDGGLLTKGTVATYAYGTTTTTASYYLISSVAGN---- 212 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + LT + M+++V + L+ + + + +G + + + Sbjct: 213 ---------TSSASEVTLTSTTTDDEIDGMVASVDKMLTSMTDAASTIGATTSRLKLQDS 263 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+++ ++ IDT + + + + + +L L + ++ +Q LSI N Sbjct: 264 FIKDLSDTIDTGVGRLVDADMNEESTKLKALQTQQQLG------IQSLSIAN 309 >gi|150395493|ref|YP_001325960.1| flagellin domain-containing protein [Sinorhizobium medicae WSM419] gi|150027008|gb|ABR59125.1| flagellin domain protein [Sinorhizobium medicae WSM419] Length = 395 Score = 43.2 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 38/89 (42%), Gaps = 6/89 (6%) Query: 267 NVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHT 326 ++S V L+ + A LG I+ + F+ ++ ID+ + + + + + Sbjct: 302 AAALDALISGVDAALTDMTSAAADLGSIAMRIDLQSDFVNKLSDSIDSGVGRLVDADMNE 361 Query: 327 AHAQLSTLINKIEMSYMITTKLQKLSILN 355 +L L + +++ +Q LSI N Sbjct: 362 ESTRLKALQTQQQLA------IQSLSIAN 384 >gi|222095363|ref|YP_002529423.1| flagellar hook-associated protein flgl [Bacillus cereus Q1] gi|221239421|gb|ACM12131.1| flagellar hook-associated protein FlgL, putative [Bacillus cereus Q1] Length = 287 Score = 43.2 bits (100), Expect = 0.059, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 55/164 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS ++ LS + K + + L G + + + V Sbjct: 63 QKDIADSKNVLSQTENTLSGIVKSLTRADQLTIQALNGPNGEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGF 169 AN ++G+YLF G ++ + P T K ++ G+ Sbjct: 123 YLANTKEQGRYLFGGNSAEKPPFADDGTYQGGEKDVMWKLNDGY 166 >gi|146277701|ref|YP_001167860.1| flagellin-like protein [Rhodobacter sphaeroides ATCC 17025] gi|145555942|gb|ABP70555.1| Flagellin and related hook-associated protein-like protein [Rhodobacter sphaeroides ATCC 17025] Length = 409 Score = 43.2 bits (100), Expect = 0.060, Method: Composition-based stats. Identities = 33/309 (10%), Positives = 88/309 (28%), Gaps = 27/309 (8%) Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + R + L S + + LR + Sbjct: 114 AEALREAMLAAANRKDGTGQGLFSGYATGAAFEKTATGVRFAGNAGQPVAQLSESLRVA- 172 Query: 122 ESFVTFANMTDEGQYLFSGINSS-------------EKPLNGYFTKDSLAKKSFDQMLQG 168 + G +F + + L+ +K + ++ S Sbjct: 173 --------TSLGGNEVFMTVETEGGVRSLFDLADDLVAALSPPISKATTSRTSVGTASLS 224 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKD 228 ++ L + ++ + ++ + + + + R+ Sbjct: 225 IEPVQGEATLRFTLTGPGG--SAEIEQRLPGSVEEAINAAAATTGITATTAADGSLRLAS 282 Query: 229 TEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQR 288 I++S G R++ +A + E + R M + + + EQR Sbjct: 283 LGTIELSGMSRSDGAREV--LATLTDERGREGWVVDKR-FGASPMTAAFDAAIGHMAEQR 339 Query: 289 AVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKL 348 A G +++ + ++ + + ++ ++ A +L L+ E + K+ Sbjct: 340 ARAGSLAASVDSQMEAIKGRQTRMTQTVAGLEDLDVAAAVTRLQALLLTQEAAQQTYVKI 399 Query: 349 QKLSILNYL 357 S+ +YL Sbjct: 400 ASRSLFDYL 408 >gi|289679011|ref|ZP_06499901.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. syringae FF5] Length = 392 Score = 43.2 bits (100), Expect = 0.062, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ FE N + + K EE+ +G + +L+ Q+ + + + Sbjct: 3 ISTTQFFESTNTNYQRNYSNLNKTSEEVSSGIKLNTAGDDPVGAARVLQLAQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + T++ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ETNIGTINTNVVTTETTLTSIIDTMQAAREQIVSAGSGAFTDSDRLAKASALKQYQSQIL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+FSG +S P Sbjct: 123 GLMNSQDPNGQYIFSGSKASTPP 145 >gi|217959223|ref|YP_002337771.1| flagellar hook-associated protein FlgL [Bacillus cereus AH187] gi|229138439|ref|ZP_04267028.1| Flagellar hook-associated protein 3 [Bacillus cereus BDRD-ST26] gi|217066372|gb|ACJ80622.1| putative flagellar hook-associated protein FlgL [Bacillus cereus AH187] gi|228644976|gb|EEL01219.1| Flagellar hook-associated protein 3 [Bacillus cereus BDRD-ST26] Length = 287 Score = 43.2 bits (100), Expect = 0.063, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 55/164 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS ++ LS + K + + L G + + + V Sbjct: 63 QKDIADSKNVLSQTENTLSGIVKSLTRADQLTIQALNGPNGEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGF 169 AN ++G+YLF G ++ + P T K ++ G+ Sbjct: 123 YLANTKEQGRYLFGGDSAEKPPFADDGTYQGGEKDVMWKLNDGY 166 >gi|288574710|ref|ZP_06393067.1| flagellin domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570451|gb|EFC92008.1| flagellin domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 1030 Score = 43.2 bits (100), Expect = 0.064, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 54/145 (37%), Gaps = 2/145 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQE-KNHIAE 64 +S S ++ M +K++++ TG+ VT L + Sbjct: 4 VSNSMMYGGMMTDMHNNLARLLKMNKQGSTGKLHHKPSDSPIDVTRELSLSTTIYENEQY 63 Query: 65 RLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + N +T L + + L+ + +++ + V G ++ + A + + E Sbjct: 64 IRNMNDGLTW-LKNTDSALNQIGEMIDRVRSLSVRAGSGALNDEEMDAIAQEMIELQEGI 122 Query: 125 VTFANMTDEGQYLFSGINSSEKPLN 149 AN + EG+YL SG +S Sbjct: 123 REAANYSVEGRYLLSGAATSVPAFQ 147 >gi|303325591|ref|ZP_07356034.1| flagellar hook-associated protein 3 [Desulfovibrio sp. 3_1_syn3] gi|302863507|gb|EFL86438.1| flagellar hook-associated protein 3 [Desulfovibrio sp. 3_1_syn3] Length = 519 Score = 43.2 bits (100), Expect = 0.065, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 32/87 (36%) Query: 271 KKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQ 330 + L+ +++ I + G E + L + +S + ++ + Sbjct: 433 GQSLAALKKAHERITTEADRYGGLENRVEMAADVLSFQKLDQQERLSYTEDIDLTELLTK 492 Query: 331 LSTLINKIEMSYMITTKLQKLSILNYL 357 L+ + ++ + KLS+ NY+ Sbjct: 493 LTRQQLTYQTVLQSSSMIMKLSLANYI 519 >gi|323527705|ref|YP_004229858.1| flagellar hook-associated protein 3 [Burkholderia sp. CCGE1001] gi|323384707|gb|ADX56798.1| flagellar hook-associated protein 3 [Burkholderia sp. CCGE1001] Length = 407 Score = 43.2 bits (100), Expect = 0.067, Method: Composition-based stats. Identities = 50/404 (12%), Positives = 127/404 (31%), Gaps = 52/404 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++ F + +L+ E+ +G S ++ +A+ Sbjct: 3 ISSTQYFTMNVATMSDQQAQLSQLYAEISSGVSLSTPSDNPLGAAQAVQLSSTATSLAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L + L S+ ++Q + ++ +G +N A L+ + Sbjct: 63 TSNQNTALASLQLEDSTLGSVNNVLQSIHTLVLRAGDGSLNNGDRGSIATELQSLRSQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTK----------------DSLAKKSFDQMLQG 168 T AN TD +G YLF+G SS +P N S ++ D L Sbjct: 123 TLANATDPQGNYLFAGYQSSAQPYNTNSAGVVTYSGDTGTPAVQITGSHVVQTGDNGLAI 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKD 228 F A + ++ ++ + ++ ++++++ + + Sbjct: 183 FGSVAPIGTSAVPAAAAGNTGTGVISTVSLNNPTNPANADTYSIDFTSSTTYTVSQTDPA 242 Query: 229 TEGIDVS--------------------------------ANVNMRGIRDIMFVAVIGTEF 256 T + S + ++ + + Sbjct: 243 TGAVTTSGPQAFTAGSAITLGGQSISISGAPNAGDSFSVTPATQGSMDVFANLSQLISTL 302 Query: 257 ---LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 +S + + ++ ++ ++ ++ +A +G E+ I + Q Sbjct: 303 QSPVSGGASTASLQSALVTSMAQLENTMNNVVTAQATVGGREQEIQALQTVTQANTLQTS 362 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +S + + + N ++ + K+Q +S+ YL Sbjct: 363 SNLSDLTQTDMIKTVGKYTLAQNALQAAQQAFVKIQNMSLFQYL 406 >gi|241666531|ref|YP_002984615.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861988|gb|ACS59653.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 302 Score = 43.2 bits (100), Expect = 0.067, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 113/352 (32%), Gaps = 63/352 (17%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I+T++ + +N + + TG D A + + ++ Sbjct: 2 TSINTNNSAMSALQTLRSINSNLETTQNSVSTGYRVDTASDNAAYWSIATTMRSDNKALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ + + +V ++ LV E D +K L++ S Sbjct: 62 AVSDALGLGAAKVDTAYTAMENAIDVVDEIKSKLVAATEDGVDKSKVQEEITQLQEQLLS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A+ FSG N + +S K + ++ + Sbjct: 122 IAQSAS--------FSGEN--------WVAGESGTKSVVSS-----FVRDGSGAVSVKVT 160 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + + + + S I GI + + N + Sbjct: 161 DYALDTSST-----GNVLFGMSSGT-----------------IDTASGILGTVDANGDSV 198 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 ++ T+F + + LST++ LS + A LG I + Sbjct: 199 -----YSLDITDFTTGQIQS---------ALSTIESALSAMTSAGAQLGSISTRIELQED 244 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ ++ I++ + + + + ++LS L + +++ +Q LSI N Sbjct: 245 FVGALSDSIESGVGRLVDADMEEESSRLSALQTQQQLA------IQSLSIAN 290 >gi|256020235|ref|ZP_05434100.1| flagellar hook-associated protein 3 [Shigella sp. D9] gi|331666553|ref|ZP_08367427.1| flagellar hook-associated protein 3 [Escherichia coli TA271] gi|332281397|ref|ZP_08393810.1| flagellar hook associated protein [Shigella sp. D9] gi|331065777|gb|EGI37661.1| flagellar hook-associated protein 3 [Escherichia coli TA271] gi|332103749|gb|EGJ07095.1| flagellar hook associated protein [Shigella sp. D9] Length = 309 Score = 43.2 bits (100), Expect = 0.069, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 109/349 (31%), Gaps = 47/349 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ D + E+M TG+ T I + ++++ I + Sbjct: 3 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + ES V Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ QG + ++ G ++ Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDNDGDGVTDSY--SYQGNSDHRQTTVSNGVEVD 180 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + + L S + + ++ +D ++ I++ Sbjct: 181 TNVAASDFFGSNLDVLNTLNSLSQELQDPNADPADPQVQSDIQN---------------- 224 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + V + A LG ++ ++ Sbjct: 225 ----------------------------AVDVVDTASDDLNASIASLGETQNTMSMLSDA 256 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 257 QTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 305 >gi|163785038|ref|ZP_02179765.1| hypothetical protein HG1285_05495 [Hydrogenivirga sp. 128-5-R1-1] gi|159879694|gb|EDP73471.1| hypothetical protein HG1285_05495 [Hydrogenivirga sp. 128-5-R1-1] Length = 368 Score = 43.2 bits (100), Expect = 0.069, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 65/196 (33%), Gaps = 7/196 (3%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ IS + F + + + +K ++ +G+ L + + Sbjct: 1 MRVPDISFYNTFLKNDRIK---ENKLLKYTNQLSSGKKILQPSDNAIDSAKSLRLGKIID 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRD 119 I+ + V L T+++ L ++ + Q+ ++ +L G D I + Sbjct: 58 DISTYNRNMDQVQAVLETAESTLGNIVNVSQEARVHIIQVLNTGVMDAEDANILRDYFQS 117 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNG---YFTKDSLAKKSFDQMLQGFLEENSKS 176 + AN++ +F G+N+ P N Y + K + ++ N Sbjct: 118 VRNYIIKQANVSVGNSRIFGGVNAQIDPFNTQGIYQGQTLETKVPISKGVELNTTFNGID 177 Query: 177 LLAGQHLEVSSMNAQQ 192 L V + Sbjct: 178 YLGTIKSGVWNDTNAD 193 >gi|218662349|ref|ZP_03518279.1| putative flagellin protein [Rhizobium etli IE4771] Length = 302 Score = 43.2 bits (100), Expect = 0.070, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 119/352 (33%), Gaps = 63/352 (17%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I+T++ + +N + + TG D A + + ++ Sbjct: 2 TSINTNNSAMAALQTLRSINSNLESTQNSVSTGYRVDTASDNAAYWSIATTMRSDNKALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ + S +V ++ LV E D +K L++ S Sbjct: 62 AVSDALGLGAAKVDTAYTAMESAIDVVDEIKAKLVAATEDGVDKSKVQEEISQLQEQLMS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A+ FSG N + +S K F+ + S ++ Sbjct: 122 IAQSAS--------FSGEN--------WVAGESGTKSVV----SSFVRDGSGAVSVKMTE 161 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 ++ F S+ S I+ + GI +A+ N + Sbjct: 162 YALDTSSAGNVLF----------------GMSSGS-------IETSSGILGTADANGDSV 198 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 ++ T+F + + LST++ LS + A LG I + Sbjct: 199 -----YSLDITDFTTGQIQS---------ALSTIESALSAMTSAGAQLGSISTRIELQED 244 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ ++ ID+ + + + + ++LS L + +++ +Q LSI N Sbjct: 245 FVSALSDSIDSGVGRLVDADMEEESSKLSALQTQQQLA------IQSLSIAN 290 >gi|332187886|ref|ZP_08389619.1| flagellar hook-associated protein 3 [Sphingomonas sp. S17] gi|332012047|gb|EGI54119.1| flagellar hook-associated protein 3 [Sphingomonas sp. S17] Length = 297 Score = 43.2 bits (100), Expect = 0.071, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 48/134 (35%), Gaps = 3/134 (2%) Query: 226 IKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVL--TKKMLSTVQQGLSG 283 I D + I+VS R + + L L G +V + + + Sbjct: 164 IADGQSIEVSVGA-ERVFKAGSSDTLNVLNNLVTALKTGTGDVTGTIRDAMDKLSAANDN 222 Query: 284 IIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYM 343 + +A +G E + ++ Q T S + TA QL + ++ + Sbjct: 223 VASVQASIGAREARVELQQGLQQQAATDRATLRSTVEDADPTTAITQLQQTMTVLQATQA 282 Query: 344 ITTKLQKLSILNYL 357 TKL LS+ +YL Sbjct: 283 SFTKLSSLSLFDYL 296 >gi|241954820|ref|XP_002420131.1| nuclear pore protein, putative; nucleoporin, putative [Candida dubliniensis CD36] gi|223643472|emb|CAX42351.1| nuclear pore protein, putative [Candida dubliniensis CD36] Length = 1334 Score = 43.2 bits (100), Expect = 0.071, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 69/239 (28%), Gaps = 40/239 (16%) Query: 103 GKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF 162 G + + G + +F +N + G LF N++ +G F S + Sbjct: 23 GSSSGFGRRASIGGPTTTANTFGNTSNTSGGG--LFGNSNTNTTSGSGLFGNSSNNATNS 80 Query: 163 DQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNI 222 L G N+ S G +L + + Q L + N + N + + Sbjct: 81 TGGLFGNSANNTTSNATGSNLFGN--SNNQANTGTTNLFGSTAKPSGTTNLFGNNNATST 138 Query: 223 KYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLS 282 + T + N N G + L +T+ Sbjct: 139 TSNLFGTST--SNTNAN-------------GAALG----NSSTQGGLFNN--NTLGSSSG 177 Query: 283 GI-----IEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLIN 336 G+ ++ G S++ LQ +N + + ++ +S L Sbjct: 178 GLFGNSGTSNGSLFGNSQQ-----NNNLQAPSNQLTVNNNN-----PYSYSQVISNLQA 226 >gi|217031520|ref|ZP_03437025.1| hypothetical protein HPB128_21g78 [Helicobacter pylori B128] gi|216946720|gb|EEC25316.1| hypothetical protein HPB128_21g78 [Helicobacter pylori B128] Length = 157 Score = 43.2 bits (100), Expect = 0.071, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 43/142 (30%), Gaps = 3/142 (2%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T S +MN L + ++ +G YG Q L+++ E+N Sbjct: 1 MRVTFGSKY---NQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEEN 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L K ++ L+ A L Sbjct: 58 TLDQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERL 117 Query: 121 YESFVTFANMTDEGQYLFSGIN 142 E + AN + G + + Sbjct: 118 REHMMNVANTSIGGNFYLGAVR 139 >gi|46190574|ref|ZP_00121308.2| COG1511: Predicted membrane protein [Bifidobacterium longum DJO10A] gi|189440363|ref|YP_001955444.1| hypothetical protein BLD_1501 [Bifidobacterium longum DJO10A] gi|189428798|gb|ACD98946.1| Hypothetical membrane protein [Bifidobacterium longum DJO10A] Length = 887 Score = 42.8 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 33/265 (12%), Positives = 74/265 (27%), Gaps = 12/265 (4%) Query: 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114 K A + + K S L+ Q Q LV L + + + A Sbjct: 206 LADAKQTTASLRQTVAAAQKASRQSGTLLAETQAGSQAFSTTLVGAL--DSSSAQLSGLA 263 Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENS 174 + ++ S N N+ PLN T S K + + G + Sbjct: 264 VHVNNAAGSITGSFNSAQNSVDTI--TNTLSAPLNATQTSISDLKDALTKAGIGKDTTDP 321 Query: 175 KSLLAGQHLEV--SSMNAQ--QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 + ++ S ++ Q Q+ F + + N S A + I Sbjct: 322 VGQNIWKQIDALDSLISKQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIAALN 381 Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEF-LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRA 289 S + + + + T + + + Q + + + + Sbjct: 382 TARGSLT--GTVMPSLTSSLNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKT 439 Query: 290 VLGISEKNINE-ERVFLQNKNNIID 313 + ++ ++ + + +I Sbjct: 440 TISSTQDSLRQVASDVATVRTDIAT 464 >gi|218507707|ref|ZP_03505585.1| flagellin C protein [Rhizobium etli Brasil 5] Length = 222 Score = 42.8 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 60/141 (42%), Gaps = 16/141 (11%) Query: 216 NASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVI-GTEFLSKNLTDGARNVLTKKML 274 +S N+ + + T ID SA + I + + + F S ++ L Sbjct: 85 TSSSGNVLFGMTSTGTIDTSAGIIGTSYGTIGSIYSMDISTFGSVEISM---------AL 135 Query: 275 STVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTL 334 ++++ GL + + + LG I + F+ ++ ID+ + + + + ++L+ L Sbjct: 136 TSIEAGLEAMTKAASQLGSISTRIELQENFVGALSDSIDSGVGRLVDADMEEESSKLTAL 195 Query: 335 INKIEMSYMITTKLQKLSILN 355 + +++ +Q LSI N Sbjct: 196 QTQQQLA------IQSLSIAN 210 >gi|186477705|ref|YP_001859175.1| flagellar hook-associated protein FlgL [Burkholderia phymatum STM815] gi|184194164|gb|ACC72129.1| flagellar hook-associated protein 3 [Burkholderia phymatum STM815] Length = 406 Score = 42.8 bits (99), Expect = 0.077, Method: Composition-based stats. Identities = 46/404 (11%), Positives = 122/404 (30%), Gaps = 54/404 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ISTS F + +L++++ +G S ++ + +++ Sbjct: 3 ISTSQYFGMNVQTMDDQQSTLAQLYQQLSSGVSLATPSDNPVGAAQAVQLSMQGATLSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + L + LSS+ ++ + LV +G ++ A L+ + Sbjct: 63 ASNQNTALQALQSEDGSLSSVNTVLTTINTLLVRAGDGSLNDGDRGDIATQLQGIRSQLM 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYF-------------------TKDSLAKKSFDQM 165 AN TD G YL++G +S P + T++ + + Sbjct: 123 GLANGTDGSGNYLYAGYQASTPPFSVDASGAVQYNGDNGIQHVQVTGTRNIAIGDTGRDV 182 Query: 166 LQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSNASDHNI 222 G S + AG S ++ + D + + + + Sbjct: 183 FLGISPAGSSPVTAGNSSNTGSGTIGNVS--VSNPTDPTNQHKYTINFTSTTTYTITDVT 240 Query: 223 KYRIKDTEG-----------------------------IDVSANVNMRGIRDIMFVAVIG 253 + + +A + ++ V Sbjct: 241 AATTSAPQTYAAGQAITLGGGGQNVTISGAPNAGDSFSVTPAAQSSTDVFANLDKVIAAL 300 Query: 254 TEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 +S ++ + ++ + + +G E+ I + Q + Sbjct: 301 QTSVSGAGGQANLTNALGTAMTQLHNTMNNVTSIQTSVGGREQEIEALQTVTQTNSLQTS 360 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ + + ++ + ++ + + +QKLS+ +Y+ Sbjct: 361 SNLADLTQTDLTSTISKYTMTQFSLQAAQQGFSMIQKLSLFDYI 404 >gi|261253607|ref|ZP_05946180.1| flagellar hook-associated protein FlgL [Vibrio orientalis CIP 102891] gi|260936998|gb|EEX92987.1| flagellar hook-associated protein FlgL [Vibrio orientalis CIP 102891] Length = 397 Score = 42.8 bits (99), Expect = 0.078, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 58/164 (35%), Gaps = 11/164 (6%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G+ SD L I Q+K Sbjct: 5 ISSFHNYQSVQNDLRRSEAKVHHNQAQLASGKKLMKASDDPLA----THYIQNIGQQKEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + + L RL + +S+ ++ D ++ ++ G + + Sbjct: 61 LRQYTDAIVLTRNRLEHHEVIISNAEEFTDDAKRTVMEMINGSLSPEDRLAKRREIEELA 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ 164 +F+ N+ D G Y+F+G +P + KD + D Sbjct: 121 NNFLNLVNVQDESGNYIFAGTKPKNQPF--FRDKDGDVTYAGDD 162 >gi|323191379|gb|EFZ76641.1| flagellar hook-associated protein 3 [Escherichia coli RN587/1] Length = 309 Score = 42.8 bits (99), Expect = 0.080, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 110/349 (31%), Gaps = 47/349 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ D + E+M TG+ T I + ++++ I + Sbjct: 3 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + ++ ES V Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIQSLTESMV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ QG + ++ G ++ Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSY--SYQGNSDHRQTTVSNGVEVD 180 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + + L S + N + +D ++ I++ Sbjct: 181 TNVAASDFFGSNLDVLNTLNSLSQELQNPGVDPADPQVQSDIQN---------------- 224 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 ++ V + A LG ++ ++ Sbjct: 225 ----------------------------AVNVVDTASDDLNASIASLGETQNTMSMLSDA 256 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 257 QTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 305 >gi|220905262|ref|YP_002480574.1| flagellar hook-associated protein 3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869561|gb|ACL49896.1| flagellar hook-associated protein 3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 512 Score = 42.8 bits (99), Expect = 0.081, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 39/87 (44%) Query: 271 KKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQ 330 +K L+ ++Q + I+ A +G E ++ + L + + +S + ++ A+ Sbjct: 426 QKSLAAIEQAHAHILAYEARIGGLENRVSMAQDVLSFQKLDQEERLSYTEDIDLTELLAK 485 Query: 331 LSTLINKIEMSYMITTKLQKLSILNYL 357 L+ + ++ + ++S+ Y+ Sbjct: 486 LTRQQLTYQTVLQSSSMIMQMSLAKYI 512 Score = 35.8 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 74/225 (32%), Gaps = 16/225 (7%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ SS++ M ++ ++ +E+ T + + A + +L + + + Sbjct: 5 VTQSSMYNTMVGQMQKSLSAYMESNEQGSTQKKINRPSDDPAGMYRVLMTRDDISATKQY 64 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L + L + + + T ++ + A R+ + + Sbjct: 65 QSNCDTAKGWLELTDNVLGTQLSNAIISLKSRMEQAATGTTADQRKLIAQEAREIFGQIL 124 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 +N G+ +F+G LN Y + SLA +D + ++ H + Sbjct: 125 NLSNTQFNGKSIFAGQRYD---LNAY--EQSLALTCWDDTWN--------NEISQGHYSI 171 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWS-NASDHNIKYRIKDT 229 + M I+ +D + WS + D + Sbjct: 172 DGASNTSMM--IQFTDDGTLGTDTLTYRWSKDGGDTWTTSTVPAG 214 >gi|298529919|ref|ZP_07017321.1| flagellar hook-associated protein 3 [Desulfonatronospira thiodismutans ASO3-1] gi|298509293|gb|EFI33197.1| flagellar hook-associated protein 3 [Desulfonatronospira thiodismutans ASO3-1] Length = 645 Score = 42.8 bits (99), Expect = 0.082, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 36/88 (40%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 ++ L+ + L I + A +G E ++ L + +SK V+ + Sbjct: 558 IQRSLANIDDTLKHISSELASVGARENRLDVASTVLSGLEHNEKERLSKIEDVDVAELMS 617 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 +L E ++ + ++S++N+L Sbjct: 618 RLMNQQMTYEAVLRSSSMIMQMSLVNHL 645 >gi|313897102|ref|ZP_07830649.1| hypothetical protein HMPREF9162_0260 [Selenomonas sp. oral taxon 137 str. F0430] gi|320530513|ref|ZP_08031571.1| hypothetical protein HMPREF9555_01675 [Selenomonas artemidis F0399] gi|312974549|gb|EFR40017.1| hypothetical protein HMPREF9162_0260 [Selenomonas sp. oral taxon 137 str. F0430] gi|320137346|gb|EFW29270.1| hypothetical protein HMPREF9555_01675 [Selenomonas artemidis F0399] Length = 448 Score = 42.8 bits (99), Expect = 0.086, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 7/133 (5%) Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKF--PINAGMLRDS 120 S ++ +Q LS M+ I + + D P A + Sbjct: 61 ERYQSSVKAGLSWMNATQNALSGMEDIQKTFKAKTIQAANDDKDEKGGDWPAIAREMMAG 120 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + V+ N +Y+FSG +P + DS K D+ L L++ + G Sbjct: 121 IQQIVSLGNTQLGDRYIFSGQADLTQP---FSMTDSSHK--VDRGLTKTLDDRQTAFFNG 175 Query: 181 QHLEVSSMNAQQM 193 E S QM Sbjct: 176 VSNEKSGDFLHQM 188 Score = 40.8 bits (94), Expect = 0.34, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 30/89 (33%) Query: 269 LTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAH 328 ++ ++ ++ G + + L N I I+ + Sbjct: 359 ISSDGVTLADAANQVTLQAHTETGARSRLYTDMTDILTNHKENITKDITDVSSTDVAALA 418 Query: 329 AQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + MS + ++ LS+++YL Sbjct: 419 TKMMQQQTLMSMSLSMGARILPLSLVDYL 447 >gi|332525059|ref|ZP_08401239.1| flagellin-related hook-associated protein [Rubrivivax benzoatilyticus JA2] gi|332108348|gb|EGJ09572.1| flagellin-related hook-associated protein [Rubrivivax benzoatilyticus JA2] Length = 308 Score = 42.8 bits (99), Expect = 0.087, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 84/283 (29%), Gaps = 50/283 (17%) Query: 76 LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDE-G 134 + +++ L + ++Q +V G + A LR + AN D G Sbjct: 73 MLQAESALGNAGDLLQQARELVVQGGNGSYGASNRETLADALRGIRAQLLGVANRGDGAG 132 Query: 135 QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 Y+F+G + P T + + + + +E + G+ Sbjct: 133 GYVFAGQGADSPPFVD--TPGGVIFRGAEGEISAASDEALPLSVDGRQA----------- 179 Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGT 254 W A D + + +D + Sbjct: 180 -------------------WLGARDPSGTGTVSVFTALDT-----------------VIG 203 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 + +L++ + K+ L+ + ++ ++ RA G + + + T Sbjct: 204 KLSDGSLSEAEVSTAVKEGLADIDAVMNNVLTSRAAAGEALNRTDMVESRIAESKLAAKT 263 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S + ++ A + + + + +Q+ S+ YL Sbjct: 264 ERSNAEDLDMVQAISDFQNRQTGYDAALKTYSLVQRQSLFQYL 306 >gi|297570284|ref|YP_003691628.1| flagellin hook IN repeat protein [Desulfurivibrio alkaliphilus AHT2] gi|296926199|gb|ADH87009.1| flagellin hook IN repeat protein [Desulfurivibrio alkaliphilus AHT2] Length = 983 Score = 42.8 bits (99), Expect = 0.087, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 79/215 (36%), Gaps = 27/215 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQ----SSDYGLQLGARVTSILEWEQEKNH 61 ++ SI+ + ++N D ++++++ +G+ SD + L + + + Sbjct: 3 VTMQSIYNNILTNLNKVNSDMNRINQQISSGKLMSKISDNPVNLVNALGLRTNLSEIGQY 62 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + N+++ S S+ L+ + +V + A +++ + Sbjct: 63 QRNINYGNTII----SASETALTETKDLVMRAKTLAIQAANAPMTAENRENAAMEVKNLW 118 Query: 122 ESFVTFANMTDEGQYLFSGINS-SEKP----------LNGYFTKDSLAKKSFDQMLQGFL 170 E + AN G+++F G + P ++GYF + D QG Sbjct: 119 EQAIILANSAVNGKHIFGGFRTIGYTPAEPTPFVKGAMDGYFVNGA------DPAPQGIS 172 Query: 171 EENSKSLLAGQHLEVSS--MNAQQMTDFIKQLEDK 203 + ++G L +N Q + +++ E Sbjct: 173 GPLTSDQISGGTLTTDDLQINGQDLVTLLQEAEYP 207 >gi|270262394|ref|ZP_06190665.1| flagellar hook-associated protein 3 [Serratia odorifera 4Rx13] gi|270043078|gb|EFA16171.1| flagellar hook-associated protein 3 [Serratia odorifera 4Rx13] Length = 319 Score = 42.8 bits (99), Expect = 0.089, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 118/350 (33%), Gaps = 40/350 (11%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS ++++ +K E++ TG+ + + Q ++ + Sbjct: 3 MSTSMMYQQNMTGITGNQSLFMKAAEQLSTGKKVSNPSDDPLAASQAVMLAQSQSENTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + +S + L+ + DM L++ G +N A L+ + + Sbjct: 63 ALARTFARQSVSMEETVLAGATSTISDM-KALIVNAGGTKSDNDRDSLATQLQGLKDQLL 121 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 AN TD G+++F G + + P S++ + ++ ++ N + Sbjct: 122 NQANSTDGNGRFMFGGFENDKPPFAN--NGGSVSYVGGNTPVEQKVDANRIMTVGHTG-- 177 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + + + S AS N+ I Sbjct: 178 -------------DTVFMSLTSNPKPEPDGS-ASVSNVFESI------------------ 205 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 DI A+ + + T N K + + ++ RA LG ++ + Sbjct: 206 DIALKALKTPLDGADDATKQQVNDAMAKANRGLDNSYNKVLSVRAELG-NQLQEMDTLDS 264 Query: 305 LQNKNNIID-TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + ++I+ T +S + + + + ++ SY +Q +S+ Sbjct: 265 IGKDRDMINQTQMSALVDADLTESISSYFMQQAALQASYKTFGDMQGMSL 314 >gi|300817262|ref|ZP_07097480.1| flagellar hook-associated protein 3 [Escherichia coli MS 107-1] gi|300530238|gb|EFK51300.1| flagellar hook-associated protein 3 [Escherichia coli MS 107-1] Length = 317 Score = 42.8 bits (99), Expect = 0.089, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 109/349 (31%), Gaps = 47/349 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ D + E+M TG+ T I + ++++ I + Sbjct: 11 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 70 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + ES V Sbjct: 71 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 130 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ QG + ++ G ++ Sbjct: 131 AALNYQDEDGHYVFGGTINDQPPIVAVDNDGDGVTDSY--SYQGNSDHRQTTVSNGVEVD 188 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + + L S + + ++ +D ++ I++ Sbjct: 189 TNVAASDFFGSNLDVLNTLNSLSQELQDPNADPADPQVQSDIQN---------------- 232 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + V + A LG ++ ++ Sbjct: 233 ----------------------------AVDVVDTASDDLNASIASLGETQNTMSMLSDA 264 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 265 QTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 313 >gi|269961606|ref|ZP_06175968.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833647|gb|EEZ87744.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 396 Score = 42.8 bits (99), Expect = 0.091, Method: Composition-based stats. Identities = 53/402 (13%), Positives = 123/402 (30%), Gaps = 52/402 (12%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQ 57 T IS+ ++ + + E++ +G+ SD L I Q Sbjct: 1 MLTRISSFHNYQSVQNDLRRQENKVHHNQEQLASGKQLTKPSDDPLA----THYIQSIGQ 56 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 ++ + + L + LV RL + +++ ++ + + ++ G L Sbjct: 57 QEEQLKQYLDAIVLVRNRLENQEVVIANAEQFTDESKRISMEMINGAFSPEDRAAKKREL 116 Query: 118 RDSYESFVTFANMTD-EGQYLFSGINSSEKP-LNGYFTKDSLAKKSFDQMLQGFLEENSK 175 + +F+ N D G Y+F+G +P Y S+ D + + N + Sbjct: 117 EEIANNFLALVNTQDESGNYVFAGTKPKSQPFFRDY--DGSVVYTGDDYQRKMKIASNIE 174 Query: 176 SLLAGQHLEVSSMNAQQMTDF-------------IKQLEDKFSDDEYWANNWSNASDHNI 222 + + S DF + Q D+ + + + S+ Sbjct: 175 LGINYPGNHLFSEIPNPFGDFEPQYDLQEGSELLLGQATSASEDNSNYKVTFVDMSNGKF 234 Query: 223 KYRIKDTEGI---------------------DVSANVNMRGIRDIMFVAVIGTEF----- 256 Y+++ I + + + F Sbjct: 235 GYQLEKDGSIVQVDDYSPIDGIQYEGINIQLKGQVSAGDSITLEPRQTFSVFDAFKETMQ 294 Query: 257 -LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 +++D + +M Q + + R LG ++ + ++ N + Sbjct: 295 WSESSVSDASATAKLHQMTEEFQAAFVHMNKVRTDLGAKLSTLDIQEQNHEDFNLSLAKA 354 Query: 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S ++ A + S ++ S K + L++ NY+ Sbjct: 355 KSNFEDLDYSKAVIEFSENSRALQASQQAFGKTKDLTLFNYI 396 >gi|152222|gb|AAA26278.1| flagellin B (flaB) [Sinorhizobium meliloti] Length = 396 Score = 42.8 bits (99), Expect = 0.093, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 36/86 (41%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 ++S V L+ + A LG I+ + F+ ++ID + + + + + Sbjct: 305 LDALISGVDAALTDMTSAAADLGSIAMRIDLQSDFVNKLMDVIDKGVGRLVDADMNEEST 364 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +L L + ++ +Q LSI N Sbjct: 365 RLKALQTQQQLG------IQSLSIAN 384 >gi|307136865|ref|ZP_07496221.1| flagellar hook-associated protein FlgL [Escherichia coli H736] Length = 260 Score = 42.8 bits (99), Expect = 0.093, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 55/144 (38%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M +L+ D + E+M TG+ T I + ++++ I + Sbjct: 3 VTTQQTYVSMTQSFNDLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + ES V Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPL 148 N D +G Y+F G + + P+ Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPI 146 >gi|209546052|ref|YP_002277942.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538909|gb|ACI58842.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 302 Score = 42.8 bits (99), Expect = 0.094, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 115/352 (32%), Gaps = 63/352 (17%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I+T++ + +N + + TG D A + + ++ Sbjct: 2 TSINTNNSAMAALQTLRSINSNLETTQNSVSTGYRVDTASDNAAYWSIATTMRSDNKALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ + S +V ++ LV E D +K L++ S Sbjct: 62 AVSDALGLGAAKVDTAYTAMDSAIDVVDEIKSKLVAATEDGVDKSKVQEEISQLQEQLMS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A + G+ +G + ++ ++ + S A + ++ + S + + Sbjct: 122 IAQSA--SFSGENWVAGADGTKSVVSSFVRDGSGA---VSVKMTDYVLDTSSAGNVLFGM 176 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 S+ + + I D S D ++ + +N + I+ + E Sbjct: 177 SGGSI---ETSTGILGTADA-SGDSVYSLDITNFTTGQIQSALSTIE------------- 219 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 LS + A LG I+ + Sbjct: 220 -----------------------------------SALSAMTSAGAQLGSISTRIDLQED 244 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ ++ ID+ + + + + ++LS L + +++ +Q LSI N Sbjct: 245 FVGALSDSIDSGVGRLVDADMEEESSKLSALQTQQQLA------IQSLSIAN 290 >gi|116626182|ref|YP_828338.1| flagellar hook-associated protein 3 [Candidatus Solibacter usitatus Ellin6076] gi|116229344|gb|ABJ88053.1| flagellar hook-associated protein 3 [Candidatus Solibacter usitatus Ellin6076] Length = 306 Score = 42.8 bits (99), Expect = 0.094, Method: Composition-based stats. Identities = 33/339 (9%), Positives = 105/339 (30%), Gaps = 49/339 (14%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 + + + ++ +G+ + + +I++ + H + + ++V + Sbjct: 16 IARVQRSVDEASRQVSSGKRVNVASDDPGNIDTIMQLKTGDTHNQQIQSNLAVVATDANA 75 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 + L+S K++ D A ++ E V+ + T +G+Y+F Sbjct: 76 ADTALTSATKLMDRARTLATQGSNFTMDAGGRQSMAAEVQSLLEQMVSISRTTVQGRYVF 135 Query: 139 SGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 G + P + T D+ + + +E+ S A Q ++ Sbjct: 136 GGDQDATAPYDLDLTADNGVARLTNATATRRVEDASGGSFAVSK-------GAQEIFDLR 188 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLS 258 +D + +A A + + + + + N Sbjct: 189 DSDDNLASGNVFA-----ALNSLRNSLLNNDQTQIAATN--------------------- 222 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 +Q + +A G + I + + + + + + Sbjct: 223 ----------------GALQVASDHLNVSQAFYGTVQNRIQDATNYAAGYSGQLKIQLGQ 266 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + A ++ +++ ++ + K+ + ++ +++ Sbjct: 267 KQDADIAAAALAITQGNTELQAAFSMQAKMPRTTLFDFM 305 >gi|331007441|ref|ZP_08330618.1| Flagellar hook-associated protein flgL [gamma proteobacterium IMCC1989] gi|330418748|gb|EGG93237.1| Flagellar hook-associated protein flgL [gamma proteobacterium IMCC1989] Length = 421 Score = 42.4 bits (98), Expect = 0.097, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 2/152 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST I+ N + N +K E++ TG+ T I + + + Sbjct: 3 ISTLHIYNLANNSMADANSAIIKTQEQLSTGKRVLTAADDPVAATQIQQLTDNLAQVDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDSYESF 124 + + L+ + L+++ +VQ + V +++ A + Sbjct: 63 TKNIATAEHNLAEEETALNNVTNLVQRIKELAVQAGNTASLSESEYDALATEVDSRINEL 122 Query: 125 VTFANM-TDEGQYLFSGINSSEKPLNGYFTKD 155 V N G Y+F+G S G Sbjct: 123 VGLTNSRNANGDYIFAGYKSQSPAFVGDSVNG 154 >gi|77457734|ref|YP_347239.1| flagellar hook-associated protein FlgL [Pseudomonas fluorescens Pf0-1] gi|77381737|gb|ABA73250.1| putative flagellar hook-associated protein 3 [Pseudomonas fluorescens Pf0-1] Length = 523 Score = 42.4 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 46/143 (32%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ + + +V E + Q + +L+ Q+ + + Sbjct: 3 ISTAQYYATQAAQYQRNYSKTVATANEASSLQRINTAADDPIGAGRLLKLGQQAAMLEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L+S+ + + G + A L + + Sbjct: 63 KGNIDTTKSSLTVQESTLTSITTALARAKEIGLAANNGIATDTDRKAYAAELTQIQQQVL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D G YLFSG + P Sbjct: 123 GLMNSKDANGNYLFSGSKTDTAP 145 Score = 37.8 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 12/108 (11%), Positives = 35/108 (32%) Query: 248 FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQN 307 V + T + + L ++ + I +G ++++E+ + Sbjct: 414 MVTALNTPIDGDPVAKQKFQGAMESALGNIESAANQIGSAVTSIGARGQSLDEQTTTNET 473 Query: 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 T + +L+ ++ S + +K+ +L + N Sbjct: 474 LIQANTTTQGSIRDSDPAEVMTRLTLQQTMLQASQLAFSKISQLGLFN 521 >gi|302339107|ref|YP_003804313.1| flagellar hook-associated protein 3 [Spirochaeta smaragdinae DSM 11293] gi|301636292|gb|ADK81719.1| flagellar hook-associated protein 3 [Spirochaeta smaragdinae DSM 11293] Length = 414 Score = 42.4 bits (98), Expect = 0.100, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 37/106 (34%), Gaps = 1/106 (0%) Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + L + L + +IE + LG ++ + R + + Sbjct: 309 MVMNLRDSLLKGDTIE-IGGSALKGISMAQDNLIETMSGLGSRDERLQLIRQRIAQERPE 367 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 I S+ V+ A L+ L + + K+ + ++L++L Sbjct: 368 IVNRDSQETDVDLAEAITDLTALEQSHKAALQTAGKILQPTLLDFL 413 >gi|148546714|ref|YP_001266816.1| flagellar hook-associated protein FlgL [Pseudomonas putida F1] gi|148510772|gb|ABQ77632.1| flagellar hook-associated protein 3 [Pseudomonas putida F1] Length = 521 Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ISTS + + + + K +E G G +L+ +Q++N + + Sbjct: 3 ISTSQFYNSNSANYQRSFSNLDKTRQEASDGIRVRRGADDPVGAARLLQLQQQQNMLDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + V L T+++ L+++ I+Q + + + NA L + Sbjct: 63 TRNVTNVRNALGTAESTLNAIGTILQRVNELAISSGNAGFTDADRKANATELASLEDQLF 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 + N D G YLFSG + P Sbjct: 123 SLMNSKDESGAYLFSGSKGDKPP 145 >gi|332701539|ref|ZP_08421627.1| flagellar hook-associated protein 3 [Desulfovibrio africanus str. Walvis Bay] gi|332551688|gb|EGJ48732.1| flagellar hook-associated protein 3 [Desulfovibrio africanus str. Walvis Bay] Length = 492 Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 34/88 (38%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 L ++ + +G + + L + + +T++S V++ Sbjct: 405 IGDSLEKLKSAHEQLTSAAGEIGGRINRVELAQTSLTLEKDRAETFLSAVEDVDEIQLSV 464 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 L+ + ++K+ KLS+L+Y+ Sbjct: 465 DLARSEYIYQSVLSTSSKILKLSLLDYM 492 >gi|218887611|ref|YP_002436932.1| flagellar hook-associated protein 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758565|gb|ACL09464.1| flagellar hook-associated protein 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 507 Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 35/91 (38%) Query: 267 NVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHT 326 ++ L + I+ A +G E ++ + L+++ + +S V+ Sbjct: 417 QTGIQQALDELGTASKVILTAAARVGGKENRLDVVQGILESQEDDQTMRMSSIEDVDVAK 476 Query: 327 AHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 QL+ ++ + ++++ N+L Sbjct: 477 LMTQLAQQQLTYNSVLKSSSMIMQMNLTNFL 507 >gi|330975983|gb|EGH76049.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 530 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ FE N + + K EE+ +G + +L+ Q+ + + + Sbjct: 3 ISTTQFFESTNTNYQRNYSNLNKTSEEVSSGIKLNTAGDDPVGAARVLQLAQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + T++ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ETNIGTINTNVVTTETTLTSIIDTMQAAREQIVSAGSGAFTDSDRLAKASALKQYQSQIL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+FSG +S P Sbjct: 123 GLMNSQDPNGQYIFSGSKASTPP 145 >gi|190890375|ref|YP_001976917.1| flagellin C protein [Rhizobium etli CIAT 652] gi|218516720|ref|ZP_03513560.1| flagellin C protein [Rhizobium etli 8C-3] gi|190695654|gb|ACE89739.1| flagellin C protein [Rhizobium etli CIAT 652] Length = 342 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 110/343 (32%), Gaps = 45/343 (13%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T I++++ +++L +NK++ + +++ +G + + + + + Sbjct: 23 MTVKITSAAAVNALSVLRS-INKEASQTQQQVSSGYRIETAADDASYWSVATVMRSDSTN 81 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + L ++ + ++S +V + LV E TD +K +D Sbjct: 82 LGTVGDALGLGAAKVDATYTAMTSAIDLVTQIRAKLVAAREPGTDKDKINAEISEYKDQL 141 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 ++ V + G+ + A ++ GF+ ++ Sbjct: 142 KTVVES--TSFAGE--------------NWLLNSDKAAPPTWSVISGFVRASTGEY---- 181 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 Q DF + ++ A D + N + Sbjct: 182 --------QAQSIDFPSSQTILIDKNNASGGLFTKAVDAQ-------------AINNSGT 220 Query: 242 GIRDIMFV---AVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 G R+ + + + + ML LS + A +G+ + I Sbjct: 221 GPRNYYLLDADSTTPATGTEVAIGKNTTDAQLADMLDVTDSLLSSLTTTSASIGVMKARI 280 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 +++ + + ++ ID + + + A + + + +M+ Sbjct: 281 DDQIDYTADLSDSIDKSVGALVDTDMDEASIRQKAIETQKQMA 323 >gi|295136522|ref|YP_003587198.1| TonB-dependent outer membrane receptor [Zunongwangia profunda SM-A87] gi|294984537|gb|ADF55002.1| TonB-dependent outer membrane receptor [Zunongwangia profunda SM-A87] Length = 952 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 73/244 (29%), Gaps = 40/244 (16%) Query: 95 GPLVILLEGKTDNNKFPINAGMLRDSYESFVTFA----NMTDEGQY------LFSG---- 140 L D F + F N+ G+Y + +G Sbjct: 496 ASLEGTSPTSFDAGGFSFSQNTTNLDVSQFFPQLFEGFNVAFGGEYRLENYNIIAGEEKS 555 Query: 141 -----------INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN 189 N+S++P +F A+ Q+ GF +N+ S + Sbjct: 556 YAQYTADGTVITNASQQPTTDFF---GNARAGGAQVFPGFSPDNAISRQRNSVAAYADFE 612 Query: 190 AQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMF- 248 A D + +F E +++ S + + R K T+ I++ A VN G R Sbjct: 613 ADVTKDLLLTFAGRF---ENYSDFGSTL-NFKVASRYKLTDNINLRAAVN-TGFRAPSLH 667 Query: 249 --VAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGI---IEQRAVLGISEKNINEERV 303 + + + + G+ + + A LGI+ I + + Sbjct: 668 QIYYNSTSTVFNDEGNPVQVGTFSNDSRAAKLLGIPDLKEETSKSASLGIT-AKIPDANL 726 Query: 304 FLQN 307 + Sbjct: 727 TITA 730 >gi|17380397|sp|P13119|FLAB2_RHIME RecName: Full=Flagellin B gi|12057230|gb|AAB81423.2| FlaB [Sinorhizobium meliloti] Length = 395 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 38/89 (42%), Gaps = 6/89 (6%) Query: 267 NVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHT 326 ++S V L+ + A LG I+ + F+ ++ ID+ + + + + + Sbjct: 302 AAALDALISGVDAALTDMTSAAADLGSIAMRIDLQSDFVNKLSDSIDSGVGRLVDADMNE 361 Query: 327 AHAQLSTLINKIEMSYMITTKLQKLSILN 355 +L L + +++ +Q LSI N Sbjct: 362 ESTRLKALQTQQQLA------IQSLSIAN 384 >gi|119389099|pdb|2D4X|A Chain A, Crystal Structure Of A 26k Fragment Of Hap3 (Flgl) Length = 248 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 51/136 (37%), Gaps = 5/136 (3%) Query: 49 VTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN 108 + + Q + ++ + + T+++S ++ LS + +Q +V G ++ Sbjct: 8 ASQAVVLSQAQAQNSQYALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDD 67 Query: 109 KFPINAGMLRDSYESFVTFANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFD 163 A L+ + + AN TD G+Y+F+G + P + GY + + D Sbjct: 68 DRASLATDLQGIRDQLMNLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQQVD 127 Query: 164 QMLQGFLEENSKSLLA 179 + + Sbjct: 128 SARTMVIGHTGAQIFN 143 >gi|331640720|ref|ZP_08341867.1| bacterial flagellin N-terminus subfamily [Escherichia coli H736] gi|331040094|gb|EGI12302.1| bacterial flagellin N-terminus subfamily [Escherichia coli H736] Length = 268 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 55/144 (38%), Gaps = 1/144 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M +L+ D + E+M TG+ T I + ++++ I + Sbjct: 11 VTTQQTYVSMTQSFNDLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 70 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + ES V Sbjct: 71 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 130 Query: 126 TFANMTD-EGQYLFSGINSSEKPL 148 N D +G Y+F G + + P+ Sbjct: 131 AALNYQDEDGHYVFGGTINDQPPI 154 >gi|146294543|ref|YP_001184967.1| flagellar hook-associated protein 3 [Shewanella putrefaciens CN-32] gi|145566233|gb|ABP77168.1| flagellar hook-associated protein 3 [Shewanella putrefaciens CN-32] Length = 305 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 70/197 (35%), Gaps = 12/197 (6%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 V +++ +++ + + + + ++ +S S+ +LSSM + Q M + Sbjct: 45 GVVRVMDNQRDLALVQQYIKNIDSLSTSMSRSETYLSSMVETQQRMKEISIATNSSNLSA 104 Query: 108 NKFPINAGMLRDSYESFVTFAN-MTDEGQYLFSGINSSEKPL-----NGYFTKDSLAKKS 161 A + + + V N + G YLFSG + P+ Y + +++ Sbjct: 105 EDRASYASEMEELLKGLVDNINATDESGNYLFSGNVIDKIPVVKDATGRYVYQGDANQRT 164 Query: 162 FDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHN 221 + N + + Q M D+I L+D A +S A++ Sbjct: 165 VQTSNSSWTTANVTAEQLLFSNAGQDILNQTM-DYISVLKDPSLSPSDPA--FSAAANGI 221 Query: 222 IKYRIKDTEGIDVSANV 238 + +E +D Sbjct: 222 ---QTALSETLDSIGAA 235 >gi|78067829|ref|YP_370598.1| flagellar hook-associated protein FlgL [Burkholderia sp. 383] gi|77968574|gb|ABB09954.1| Flagellin-like protein [Burkholderia sp. 383] Length = 413 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 44/368 (11%), Positives = 102/368 (27%), Gaps = 57/368 (15%) Query: 47 ARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTD 106 A ++ +++ + + L L ++ ++ + LV +G Sbjct: 44 AGAAQAVQLSMASATLSQYATNQNAALASLQAEDQTLQNVSTVLTNTQSLLVRAGDGSMS 103 Query: 107 NNKFPINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTK----------- 154 ++ A L+ + +T AN D G YLF+G +S P + + Sbjct: 104 DSDRSALATQLQGYRDQLMTLANTNDGAGNYLFAGTKNSAAPFSTTPSGSVAYVGDTGTR 163 Query: 155 -----DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEY 209 DS D F+ + + + ++ Sbjct: 164 QVQITDSSTVSQGDTGAAVFMSVPAIGSSPVPSARAGNTGTGTIGAVTVTNPSIATNGHQ 223 Query: 210 WANNW---------------------SNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM- 247 ++ + + A ++ I G+ V+ + Sbjct: 224 FSITFGGTAAAPTYTVTDNSVSPPTTTPAQAYSSGSAISLGSGMTVAVSGTPAAGDKFAV 283 Query: 248 ------------------FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRA 289 VA + T + + + L + +A Sbjct: 284 EPAPQASGGSDVFSTLDAMVAALKTPVTGNPVAAATLKNALMTGSTKLGNTLRNVTTIQA 343 Query: 290 VLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQ 349 +G E+ + + Q + + + +S + +Q + N + S +LQ Sbjct: 344 SVGGREQEVKAMQAVNQTASLQVTSNLSDLTSTNMVSTISQFLQMQNALTGSQKAYAQLQ 403 Query: 350 KLSILNYL 357 LS+ Y+ Sbjct: 404 NLSLFQYI 411 >gi|218135313|ref|ZP_03464117.1| hypothetical protein BACPEC_03218 [Bacteroides pectinophilus ATCC 43243] gi|217990698|gb|EEC56709.1| hypothetical protein BACPEC_03218 [Bacteroides pectinophilus ATCC 43243] Length = 325 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 26/203 (12%), Positives = 61/203 (30%), Gaps = 11/203 (5%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ T +T I + L +M T + + + L N Sbjct: 1 MRIT--NTMMINNSL-ANIAVNKNQLSTLDTQMSTKKKINRPSEDPIIAIRALRLRSSLN 57 Query: 61 HIAERLHSN-SLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 + + L N + Q L + +V D+ + A L++ Sbjct: 58 EVTQYLEKNIPDANSWMKVIQGALEEGENVVSDLYKNCNQGATDSYSTEQRATLADDLQN 117 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 E++ N+ G+Y+FSG + + ++ D + + Sbjct: 118 LKETYYDQGNVDYAGRYVFSGYRTDSR-------LTFASEAEADNYSYSITQGLTADNFD 170 Query: 180 GQHLEVSSMNAQQMTDFIKQLED 202 +++ + ++ + +I Sbjct: 171 TKYVYSNPVDVTDLESYINSTAA 193 >gi|26991069|ref|NP_746494.1| flagellar hook-associated protein FlgL [Pseudomonas putida KT2440] gi|24986103|gb|AAN69958.1|AE016634_7 flagellar hook-associated protein FlgL [Pseudomonas putida KT2440] Length = 521 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 51/143 (35%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ +E + + K+ E++ + +L +Q+ + + Sbjct: 3 ISTAQFYETSATSYSQNYSNLAKITEQVTSKSRIQSAGDDPVGAARLLVLQQQSALLEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + V L ++ LS++ +Q + G + A +++ + Sbjct: 63 SGNMTTVKNALLQEESVLSTINDALQRASELAIQAGNGGLSDADRTSIASEIKEIEANVF 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D G Y+F G SS P Sbjct: 123 GLLNSRDANGDYMFGGSKSSTPP 145 >gi|94266405|ref|ZP_01290101.1| Flagellin hook IN [delta proteobacterium MLMS-1] gi|93452977|gb|EAT03473.1| Flagellin hook IN [delta proteobacterium MLMS-1] Length = 683 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 10/95 (10%), Positives = 33/95 (34%) Query: 263 DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGV 322 + +K ++ + + + Q + G I + N +S+ Sbjct: 589 SQIQASALQKSITELDTLHNELTNQISDFGARANRIEVQNNIYMNLKLATSENLSELEDT 648 Query: 323 EQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + A +L + + ++ ++S++++L Sbjct: 649 DLVEAIMELKAKETAYQAALSSASRTMQMSLVDFL 683 >gi|66046699|ref|YP_236540.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. syringae B728a] gi|63257406|gb|AAY38502.1| Flagellin, N-terminal [Pseudomonas syringae pv. syringae B728a] Length = 530 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ FE N + + K EE+ +G + +L+ Q+ + + + Sbjct: 3 ISTTQFFESTNTNYQRNYSNLNKTSEEVSSGIKLNTAGDDPVGAARVLQLAQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + T++ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ETNIGTINTNVVTTETTLTSIIDTMQAAREQIVSAGSGAFTDSDRLAKASALKQYQSQIL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+FSG +S P Sbjct: 123 GLMNSQDPNGQYIFSGSKASTPP 145 >gi|213416584|ref|ZP_03349728.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 236 Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 79/270 (29%), Gaps = 40/270 (14%) Query: 85 SMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYLFSGINS 143 + +Q +V G ++ A L+ + + AN TD G+Y+F+G + Sbjct: 1 QVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLMNLANSTDGNGRYIFAGYKT 60 Query: 144 SEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDK 203 P + +KS Q + V Q+ + I Sbjct: 61 EAAPFDQATGGYHGGEKSVTQ------------QVDSARTMVIGHTGAQIFNSITSNAVP 108 Query: 204 FSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTD 263 D N D I A + T ++ Sbjct: 109 EPDGSDSEKNLFVMLDTAI---------------------------AALKTPVEGNDVEK 141 Query: 264 GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE 323 K ++ L+ ++ RA LG ++ ++ +S + V+ Sbjct: 142 EKAAAAIDKTNRGLKNSLNNVLTVRAELGTQLSELSTLDSLGSDRALGQKLQMSNLVDVD 201 Query: 324 QHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ + ++ SY T +Q +S+ Sbjct: 202 WNSVISSYVMQQAALQASYKTFTDMQGMSL 231 >gi|307318920|ref|ZP_07598351.1| flagellin domain protein [Sinorhizobium meliloti AK83] gi|306895334|gb|EFN26089.1| flagellin domain protein [Sinorhizobium meliloti AK83] Length = 395 Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 38/89 (42%), Gaps = 6/89 (6%) Query: 267 NVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHT 326 ++S V L+ + A LG I+ + F+ ++ ID+ + + + + + Sbjct: 302 AAALDALISGVDAALTDMTSAAADLGSIAMRIDLQSDFVNKLSDSIDSGVGRLVDADMNE 361 Query: 327 AHAQLSTLINKIEMSYMITTKLQKLSILN 355 +L L + +++ +Q LSI N Sbjct: 362 ESTRLKALQTQQQLA------IQSLSIAN 384 >gi|229160703|ref|ZP_04288695.1| Flagellar hook-associated protein 3 [Bacillus cereus R309803] gi|228622718|gb|EEK79552.1| Flagellar hook-associated protein 3 [Bacillus cereus R309803] Length = 287 Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 54/164 (32%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS ++ L + K + + L G + + + V Sbjct: 63 QKDIADSKNVLSQTENTLQGIVKSLTRADQLTIQALNGTNSEKELKAIGTEVDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGF 169 AN ++G+YLF G ++ + P T K ++ G+ Sbjct: 123 YLANTKEQGRYLFGGDSAEKPPFADDGTYQGGEKDVMWKLNDGY 166 >gi|149377472|ref|ZP_01895214.1| Ribulose-5-phosphate 4-epimerase [Marinobacter algicola DG893] gi|149358239|gb|EDM46719.1| Ribulose-5-phosphate 4-epimerase [Marinobacter algicola DG893] Length = 208 Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 9/125 (7%) Query: 210 WANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVL 269 + WS A+ N RI D E I V+ + +G ++ V+ + + AR+ Sbjct: 22 YGQGWSPATSSNYSARI-DDEHIAVTVSGRHKG--KLVAGDVMVVDLAGNPIQSDARSSA 78 Query: 270 TKKMLSTVQQG---LSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHT 326 ++ + + Q + ++ +V + L + + S GV+ H Sbjct: 79 ETRLHTVLYQAFPDVGAVLHTHSVKATVLSRLLPAGEPLTLQGYELQKAFS---GVDTHE 135 Query: 327 AHAQL 331 + + Sbjct: 136 SQLTV 140 >gi|330899412|gb|EGH30831.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv. japonica str. M301072PT] Length = 530 Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ FE N + + K EE+ +G + +L+ Q+ + + + Sbjct: 3 ISTTQFFESTNTNYQRNYSNLNKTSEEVSSGIKLNTAGDDPVGAARVLQLAQQNSMLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + T++ L+S+ +Q +V G ++ A L+ + Sbjct: 63 ETNIGTINTNVVTTETTLTSIIDTMQAAREQIVSAGSGAFTDSDRLAKASALKQYQSQIL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 N D GQY+FSG +S P Sbjct: 123 GLMNSQDPNGQYIFSGSKASTPP 145 >gi|1620510|gb|AAB17053.1| laminin-5 alpha 3 chain [Rattus norvegicus] Length = 1725 Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 100/343 (29%), Gaps = 49/343 (14%) Query: 10 SIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQ------LGARVTSILEWEQEKNHI- 62 +I + +N +L L E G+ + GL LGA + E + K ++ Sbjct: 414 NIRDSLNDYEAKLQDLRSVLQEAAAQGKQA-TGLNHENEGVLGAIQRQMKEMDSLKKYLT 472 Query: 63 -------AERLHSNSLVTKRLSTSQAHLSSMQKI---VQDMVGPLVILLEGKTDNNKFPI 112 A L +NSL+ +R+ TSQ S+ + + V L Sbjct: 473 EHLATADASLLQTNSLL-QRMDTSQKEYESLAAALNGARQELNDQVRELSRSGGKAPLVA 531 Query: 113 NAGMLRDSYESFVTFA-----NMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ 167 A S + N + + S + + T + Sbjct: 532 EAEKHAQSLQELAKQLEEIKRNTSG---------DESVRCVVDAATAYESILNAIRAAED 582 Query: 168 GFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIK 227 + +S S A Q + + ++ E+ ++ + + + + Sbjct: 583 AAGKADSASESAFQTVIKEDL-PRRAKTLSSDSEELLNEAKMTRKRLQQEINPALNSLQQ 641 Query: 228 DTEGIDVS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGI 284 + + V + N+ +R+ + G + + + +K + L G+ Sbjct: 642 TLKTVSVQKDLLDANVTAVRNDLR----GIQRGDIDSVVSGAKSMVRKANGITSEVLDGL 697 Query: 285 IEQRAVLGISE-----KNINEERVFL---QNKNNIIDTYISKS 319 + LG + + L N + + Sbjct: 698 SPIQTDLGRIKDSYGSTRHEDFNKALIDANNSVKKLTKKLPDL 740 >gi|90408067|ref|ZP_01216238.1| flagellar hook-associated protein 3 [Psychromonas sp. CNPT3] gi|90310824|gb|EAS38938.1| flagellar hook-associated protein 3 [Psychromonas sp. CNPT3] Length = 501 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 49/145 (33%), Gaps = 1/145 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS+ F+R + + + + T + G + +I +Q+ + + Sbjct: 3 ISSQVFFQRNTQSVFNNQSELSEKNIHLSTQKRVINGSDDAVAIATIQRLKQDLSMADQH 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + + L+ I+Q M +V + A L+ E + Sbjct: 63 VQNGEMAETANALESISLAQSTNILQRMRELMVSSGNATYSADGREAIATELKHLREELI 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN 149 AN D QY+FSG P Sbjct: 123 GVANTKDGNSQYIFSGFEVDTLPFQ 147 >gi|302878283|ref|YP_003846847.1| flagellar hook-associated protein 3 [Gallionella capsiferriformans ES-2] gi|302581072|gb|ADL55083.1| flagellar hook-associated protein 3 [Gallionella capsiferriformans ES-2] Length = 401 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 54/149 (36%), Gaps = 1/149 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS+++IF+ V+ +++ +G+ T L+ Q ++ Sbjct: 3 ISSNTIFDNNVATLGAQQARLVQTQQQIASGRRLLTAASDPVAATRALDVTQADAINTQQ 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + V LS S++ L+S+ ++QD+ V N L + + Sbjct: 63 TANRGTVKDPLSISESTLASVTLLLQDVRTAAVAAGNATLTNTDRATIGKNLNGRLQELI 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFT 153 AN TD G L++G S P Sbjct: 123 GLANSTDGSGNALYAGFQSKTTPFVASTA 151 >gi|78222344|ref|YP_384091.1| Phage tail sheath protein [Geobacter metallireducens GS-15] gi|78193599|gb|ABB31366.1| Phage tail sheath protein [Geobacter metallireducens GS-15] Length = 638 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 57/178 (32%), Gaps = 14/178 (7%) Query: 29 LHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLV---TKRLSTSQAHLSS 85 E T +D + A+V + + N LV RL+TS A ++ Sbjct: 234 ATEFSATSTLADVAGIIQAQVRGAVVANPAVRDFTCAVDGNQLVLTSGTRLTTSSAVVTG 293 Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 L+ L T+ + S ++ ++ L G N SE Sbjct: 294 PGDATDASTTLLLGLANDGTE--------RTGQQSLDAMLSGIAGQVS---LAGGTNGSE 342 Query: 146 KPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDK 203 N Y + +K D + + S ++ + +A++M + ++ Sbjct: 343 PDKNAYDDIFAAFEKVRDISILCLPGQAWDSTTEQSIIDAAVAHAEKMRSRMVIIDPP 400 >gi|47566122|ref|ZP_00237160.1| flagellar hook-associated protein flgL, putative [Bacillus cereus G9241] gi|47557039|gb|EAL15369.1| flagellar hook-associated protein flgL, putative [Bacillus cereus G9241] Length = 287 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 49/144 (34%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS ++ L + K + + + L G + + E V Sbjct: 63 QKDIADSRNVLSQTENTLQGIVKSLTRVDQLTIQALNGTNSEKELKSIGTEIDQILEHVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLN 149 AN ++G+YLF G ++ + P Sbjct: 123 YLANTKEQGRYLFGGDSADKPPFT 146 Score = 35.8 bits (81), Expect = 9.7, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 36/79 (45%) Query: 279 QGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKI 338 + L G+I + +G + ++ + L +N + + V+ A ++L+ + Sbjct: 209 KNLDGVINRTTEVGSTMNTVDTFKTILSEQNLALQENRKEIEDVDLAAAISELAYINATY 268 Query: 339 EMSYMITTKLQKLSILNYL 357 E + + + K SIL+Y+ Sbjct: 269 EATLKAVSTMSKTSILDYM 287 >gi|70729011|ref|YP_258745.1| flagellar hook-associated protein FlgL [Pseudomonas fluorescens Pf-5] gi|68343310|gb|AAY90916.1| flagellar hook-associated protein FlgL [Pseudomonas fluorescens Pf-5] Length = 522 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 2/231 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ISTS +E ++ V+ EE + +L+ Q+ + + + Sbjct: 3 ISTSQFYESSATNYQKNFSKVVQSSEEASSLVRVKTAADDPVGAARLLQLGQQASLLDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + L +++ ++S+ ++ + NA L E + Sbjct: 63 KTNTNSIKASLGQTESVMTSINNVLARAKELASGAGNAGYTDADRQANASELGQIEEQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + N D G+Y+F G P + + + + LQ + + + Sbjct: 123 SLMNSQDENGKYIFGGSKDDVPPFSR-NSDGTYSYNGDQSSLQLPVGDTMMMAANSTGWD 181 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVS 235 V + D +N A++ + + E VS Sbjct: 182 VFQQALNTSRSQVTMTAPAVDDGRISLSNGQVANNGAYNSQFRSGEPYTVS 232 >gi|329901237|ref|ZP_08272762.1| Flagellar hook-associated protein flgL [Oxalobacteraceae bacterium IMCC9480] gi|327549169|gb|EGF33761.1| Flagellar hook-associated protein flgL [Oxalobacteraceae bacterium IMCC9480] Length = 413 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 53/410 (12%), Positives = 124/410 (30%), Gaps = 58/410 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST++ +E + +L + + ++ +G+ + L Q + + Sbjct: 3 ISTAAFYENASTRISDLQSATAQKQTQIASGKRILTPADDPVAAAAALTVSQAIDVNTQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS ++ LS+ ++Q++ + G D+++ A L Y+ + Sbjct: 63 AANRGTAKDALSLQESVLSNYTTLLQNVKTLTIAAGNGALDDSQRQYMASELAGRYQELM 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSL--------------------------- 157 AN D G Y+F G ++ P + Sbjct: 123 GIANSRDSTGNYIFGGFKNTLAPFTDVAGTTATYNGDQGQRLLQVSTSRQLSINDAGSAI 182 Query: 158 --AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT------DFIKQLEDK------ 203 KS D + + + + G + +A Q+ DF Sbjct: 183 FQNIKSGDDSVSVTPDAGNSATATGAISAATVTDATQLKHHNYSIDFTTSAALPPVTSYK 242 Query: 204 ---FSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN-------------MRGIRDIM 247 + D A+++ + +G+ SA+ + I Sbjct: 243 VFDLTTDPKKTGTPVAAANYTTDPQTIAFDGLQFSASGTPASGDKYNINPNAQSIFKTIG 302 Query: 248 FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQN 307 + + + + L + RA G + ++ N Sbjct: 303 DLITALNTPATGVTGKANLTASLSAANTNITAALDTTLNVRAAGGARLQELDTLDNEGDN 362 Query: 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ + +S ++ A ++L+ ++ + K+ LS+ NY+ Sbjct: 363 RSLQYASTLSNLQDLDYAKAVSELTQNQLTLQAAQQSFVKIANLSLFNYI 412 >gi|297182076|gb|ADI18249.1| hypothetical protein [uncultured Chromatiales bacterium HF0200_41F04] Length = 744 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 13/103 (12%), Positives = 31/103 (30%), Gaps = 6/103 (5%) Query: 1 MKTTGISTSSI------FERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILE 54 M +S S++ + L E T + ++ G +LG + + + Sbjct: 1 MLVILVSFSALAVKPSPTSDPLAAIGNAQRLLSTLDSEATTSRYAEVGRELGRTIDGVRD 60 Query: 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPL 97 + + S + R + L + + + L Sbjct: 61 GKATIEQLTTMREITSELRNRTTARLTALEVVAGEDEAALETL 103 >gi|149015650|gb|EDL75009.1| similar to Laminin alpha-3 chain precursor (Nicein alpha subunit), isoform CRA_a [Rattus norvegicus] Length = 1993 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 101/347 (29%), Gaps = 57/347 (16%) Query: 10 SIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQ------LGARVTSILEWEQEKNHI- 62 +I + +N +L L E G+ + GL LGA + E + KN + Sbjct: 682 NIRDSLNDYEAKLQDLRSVLQEAAAQGKQA-TGLNHENEGVLGAIQRQMKEMDSLKNDLT 740 Query: 63 -------AERLHSNSLVTKRLSTSQAHLSSMQKI---VQDMVGPLVILLEGKTDNNKFPI 112 A L +NSL+ +R+ TSQ S+ + + V L Sbjct: 741 EHLATADASLLQTNSLL-QRMDTSQKEYESLAAALNGARQELNDQVRELSRSGGKAPLVA 799 Query: 113 NAGMLRDSYESFVTFA-----NMTDEGQYLFSGINSSEK------PLNGYFTKDSLAKKS 161 A S + N + + + ++++ + A + Sbjct: 800 EAEKHAQSLQELAKQLEEIKRNTS-GDELVRCAVDAATAYESILNAIRAAEDAAGKAASA 858 Query: 162 FDQMLQGFLEENSKSLLAGQHLEVSS-MNAQQMTDFIKQLEDKFSDDEYWANNWSNASDH 220 + Q ++E+ + +N +M + + A N S Sbjct: 859 SESAFQTVIKEDLPRRAKTLSSDSEELLNEAKM------TRKRLQQEINPALN----SLQ 908 Query: 221 NIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQG 280 + + + + N+ +R+ + G + + + +K + Sbjct: 909 QTLKTVSVQKDL---LDANVTAVRNDLR----GIQRGDIDSVVSGAKSMVRKANGITSEV 961 Query: 281 LSGIIEQRAVLGISE-----KNINEERVFL---QNKNNIIDTYISKS 319 L G+ + LG + + L N + + Sbjct: 962 LDGLSPIQTDLGRIKDSYGSTRHEDFNKALIDANNSVKKLTKKLPDL 1008 >gi|78358191|ref|YP_389640.1| flagellar hook-associated protein FlgL [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220596|gb|ABB39945.1| flagellar hook-associated protein FlgL, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 504 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 43/121 (35%), Gaps = 5/121 (4%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 ++ + I + + T L+T+ L+ + ++ + G G D Sbjct: 45 GAARVMGYRDSLAAIKQYRSNVDTATSWLATADQTLTQVNTVLTRIKGLAEQAATGTLDA 104 Query: 108 NKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ 167 N + LR YE + AN EG+++F+G + + L + D Sbjct: 105 NNREQISFELRQQYEQLINLANTRVEGRHIFAGHKTDQPAFV-----QGLNVSTIDTAFS 159 Query: 168 G 168 G Sbjct: 160 G 160 Score = 39.3 bits (90), Expect = 0.84, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 34/91 (37%) Query: 267 NVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHT 326 ++ L+ + ++ Q A +G E ++ + L + +S V+ Sbjct: 414 QAGIQRSLAALDDVGQHVMTQVASIGGRENRLDVAKNVLTTAELDDKSRMSDIEDVDVAE 473 Query: 327 AHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +L+ ++ + ++++ NYL Sbjct: 474 LMTRLAQQQLIYNSVLKSSSMIMQMNLTNYL 504 >gi|300869688|ref|YP_003784559.1| flagellar hook-associated protein FlgL [Brachyspira pilosicoli 95/1000] gi|300687387|gb|ADK30058.1| flagellar hook-associated protein, FlgL [Brachyspira pilosicoli 95/1000] Length = 417 Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 12/102 (11%), Positives = 36/102 (35%), Gaps = 1/102 (0%) Query: 256 FLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 L D R + + L + + ++ +A ++ +++ ID Sbjct: 316 LRDAMLNDDVR-AIGSEALGYIDSAIDNVLTVQANASSKVTRLDMGYNSFEDQKLAIDEA 374 Query: 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++K+ ++ + + T +L ++L+Y+ Sbjct: 375 LAKNENIDYAEEIVNFNMWQYAHNATLQTTGRLLGRTLLDYM 416 Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 53/157 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ + + R K+ + + TGQ + + + + K+ + Sbjct: 3 VTEQAQYNRAISSIKKNYSEMEASQTRLSTGQRVQRPHENVTSTINSIYYRTRKSSLDRY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 ++ +RLS + +SS+ + + V A + + E Sbjct: 63 QNNIVDGKERLSVAHDSMSSITQALSRARDLAVQGANSTYSAEDRAKMAMEVEEMIERIY 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF 162 + +G+++FSG + P + D A +S Sbjct: 123 DISKTQSKGEFIFSGTSVKTAPFRALYGHDEKAGRSI 159 >gi|323181554|gb|EFZ66974.1| flagellar hook-associated protein 3 [Escherichia coli 1357] Length = 298 Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 44/340 (12%), Positives = 105/340 (30%), Gaps = 47/340 (13%) Query: 15 MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 M L+ D + E+M TG+ T I + ++++ I + + + Sbjct: 1 MTQSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQYQSNIDSASA 60 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-E 133 LS ++ L + + + L+ G + + ES V N D + Sbjct: 61 GLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMVAALNYQDED 120 Query: 134 GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQM 193 G Y+F G + + P+ S+ QG + ++ G ++ + + Sbjct: 121 GHYVFGGTINDQPPIVAVDNDGDGVTDSY--SYQGNSDHRQTTVSNGVEVDTNVAASDFF 178 Query: 194 TDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIG 253 + L S + + ++ +D ++ I++ Sbjct: 179 GSNLDVLNTLNSLSQELQDPNADPADPQVQSDIQN------------------------- 213 Query: 254 TEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 + V + A LG ++ ++ + + D Sbjct: 214 -------------------AVDVVDTASDDLNASIASLGETQNTMSMLSDAQTDISTSND 254 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 I ++ A + L +E + +K+ +L++ Sbjct: 255 ELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 294 >gi|312962288|ref|ZP_07776779.1| flagellar hook-associated protein FlgL [Pseudomonas fluorescens WH6] gi|311283215|gb|EFQ61805.1| flagellar hook-associated protein FlgL [Pseudomonas fluorescens WH6] Length = 527 Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 55/143 (38%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST F+ + ++ VK ++ TG +L +Q+K+ + + Sbjct: 3 ISTQQYFDTSSTKYQDNYSGVVKAQDQASTGVRVQTASDDPVAAAQLLMLQQQKDMLGQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + L+ ++ LSS+ +Q G + + N+ A + + + Sbjct: 63 NGNITTLQNSLNNEESVLSSISLAMQTASGLALQAGNLQMSNDDRKAIAAQVGALEDHVL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKP 147 N D G Y+FSG + P Sbjct: 123 GLLNSKDSSGNYMFSGAKTDTPP 145 >gi|222084873|ref|YP_002543402.1| flagellin C protein [Agrobacterium radiobacter K84] gi|221722321|gb|ACM25477.1| flagellin C protein [Agrobacterium radiobacter K84] Length = 327 Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 111/355 (31%), Gaps = 64/355 (18%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 + T+ I+ +S + L ++ + + +G A + + + + Sbjct: 26 LMTSIITNNSAMAALQTLKG-ISSNLQDTQNAVSSGLRISKASDNAAYWSISTSMKSDDS 84 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + L ++ T+ ++S +V + LV +EG D + G L+ Sbjct: 85 ALGAVSDALGLGAAKVDTASTAVTSAIDVVGQIKDKLVTAMEGSVDKDAVQEEIGQLQAQ 144 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S A + G+ + + F + + S F + ++L G Sbjct: 145 LQSVAQSA--SFNGENWVMAASGDSASVVSSFIRGTNGTVSVSTTSYAFDTGATGNVLFG 202 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 ++ ID + Sbjct: 203 ----------------------------------------------SNSGTIDTA----- 211 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 GI + + ++T G L VQ L+ + + LG I+ Sbjct: 212 SGILGTVSGSYSVFSLDISSMTTGQ----ISSALDMVQTALNSLTSMGSKLGSISSRIDL 267 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + F + ++ I + + K + + ++LS L + +++ +Q LSI N Sbjct: 268 QTSFASSLSDSIQSGVGKLVDADMEEESSKLSALQTQQQLA------IQSLSIAN 316 >gi|222147578|ref|YP_002548535.1| flagella associated protein [Agrobacterium vitis S4] gi|221734566|gb|ACM35529.1| flagella associated protein [Agrobacterium vitis S4] Length = 320 Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 112/352 (31%), Gaps = 44/352 (12%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T++ + ++ + +G A + + ++ Sbjct: 2 TSIMTNNSAISALSTLRTISSQMETTQSAISSGYKVKDASDNAAYWSIATTMRSDNKAMS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + + + T+ + + +V D+ LV E D +K L++ S Sbjct: 62 AVQDALGVGAAKTDTAYTGMEAAIGVVSDIKAKLVAAREPGVDKDKINKELTELKNQLSS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A + G+ + +S + + +M+ F+ N ++ Sbjct: 122 VAKSA--SFNGE--------------NWLYDNSDSTGTTQEMVGSFVRGN------DGNV 159 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + ++ + E D + A+ + + S N Sbjct: 160 SIKTITFDTTNSILINDEA---GDGGLLTKGTVATYAYGTTTTTASYYLISSVAGN---- 212 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + LT + M+++V + LS + + A +G ++ I + Sbjct: 213 ---------TSSASEVTLTSSTTDDEIDGMVASVDKMLSSMTDAAATIGATKSRIESQSS 263 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F ++ ++ ID I K + + + +L L + ++ +Q LSI N Sbjct: 264 FAKDLSDTIDVGIGKLVDADMNEESTKLKALQTQQQLG------IQALSIAN 309 >gi|314991314|ref|ZP_07856793.1| response regulator receiver domain protein [Enterococcus faecium TX0133B] gi|313594087|gb|EFR72932.1| response regulator receiver domain protein [Enterococcus faecium TX0133B] Length = 209 Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 55/142 (38%), Gaps = 9/142 (6%) Query: 71 LVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN------KFPINAGMLRDSYESF 124 L R+ + + + ++I+ +++LL D + +++ + ++ Sbjct: 52 LTDIRMPK-KTGIDAAKEILAKFPKAILLLLTTFKDEEYIREAFSIGVKGYLIKQNLQAI 110 Query: 125 VTFANMTDEGQYLFSG--INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQH 182 + GQ +F I + + + T DS A SF + ++E + + Sbjct: 111 IPSVKSAYNGQAVFGNEIIETFTQMMKNKPTIDSHAYASFSERELAIIKEVAAGKNNKEI 170 Query: 183 LEVSSMNAQQMTDFIKQLEDKF 204 + ++ + ++I QL +K Sbjct: 171 ADALYLSDGTVRNYISQLLEKL 192 >gi|121607554|ref|YP_995361.1| flagellar hook-associated protein 3 [Verminephrobacter eiseniae EF01-2] gi|121552194|gb|ABM56343.1| flagellar hook-associated protein 3 [Verminephrobacter eiseniae EF01-2] Length = 417 Score = 42.0 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 81/262 (30%), Gaps = 23/262 (8%) Query: 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHI 62 T + T+++++ L E + +G+ ++ S + E+ N + Sbjct: 5 ITRLGTANMYDSALRNLGTRQSQLANLQESLTSGKRV---VRASDDPVSAAQAERALNRL 61 Query: 63 AERL-HSNSLVTKR--LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 A +L +R ++ ++ L +VQ+ +V + A L+ Sbjct: 62 ARIQSDQRALAAQRNAIALGESALGDAVDLVQNFRALVVSAGDASLQPADRATIANQLQS 121 Query: 120 SYESFVTFANMTD-EGQYLFSGINSSEKPLN-------GY-FTKDSLAKKSFDQMLQGFL 170 E + AN D G L S + S++ P Y F S + L Sbjct: 122 LREQLLQVANRKDTNGVALLSALGSAQTPFAGPLGGAPDYRFAGQPGQSASAGARIAATL 181 Query: 171 EENSKSLLAGQHLEVSSMNAQQMTDF-------IKQLEDKFSDDEYWANNWSNASDHNIK 223 + ++ + + V + + + + + + +S A Sbjct: 182 DGDAAFMFDPRRDGVYTATVSPIPTGRQLTTSAVTPTAPRLVTGDDYRITFSAAGPGATP 241 Query: 224 YRIKDTEGI-DVSANVNMRGIR 244 + I + S +R Sbjct: 242 GTSSASYTITNSSTGAVSAPVR 263 >gi|118581856|ref|YP_903106.1| flagellar hook-associated protein 3 [Pelobacter propionicus DSM 2379] gi|118504566|gb|ABL01049.1| flagellar hook-associated protein 3 [Pelobacter propionicus DSM 2379] Length = 295 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 33/84 (39%) Query: 274 LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLST 333 + + G + I Q+ + ++ L+ ++ IS + + +LS Sbjct: 212 TADLDTGFNQITNQQTEVASRITRLDGAANMLKITKTTLENIISDTQLADTTKLAVELSL 271 Query: 334 LINKIEMSYMITTKLQKLSILNYL 357 + S T K+ LS+L+YL Sbjct: 272 QETAYKASLSATAKILNLSLLDYL 295 Score = 40.5 bits (93), Expect = 0.44, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 33/101 (32%) Query: 49 VTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN 108 + +L + + + S LS + L + + + + G +D Sbjct: 46 TSLLLSTNDRLQAVEQYGSNISKTNTWLSMTSTALQGISDTLTTAKSLMSTIGSGTSDQT 105 Query: 109 KFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLN 149 L E F N QYLFSG ++ KP + Sbjct: 106 ARESVVAQLTALREQLADFGNTKYLDQYLFSGSQTATKPFD 146 >gi|218678948|ref|ZP_03526845.1| flagellin domain protein [Rhizobium etli CIAT 894] Length = 296 Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 115/352 (32%), Gaps = 63/352 (17%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I+T++ + +N + + TG D A + + ++ Sbjct: 2 TSINTNNSAMAALQTLRSINSNLETTQNSVSTGYRVDTASDNAAYWSIATTMRSDNKALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ + S +V ++ LV E D +K L++ S Sbjct: 62 AVSDALGLGAAKVDTAYTAMDSAIDVVDEIKSKLVAATEDGVDKSKVQEEISQLQEQLMS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A + G+ +G + ++ ++ + S A + ++ + S + + Sbjct: 122 IAQSA--SFSGENWVAGADGTKNVVSSFVRDGSGA---VSVKMTDYVLDTSSAGNVLFGM 176 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 S+ + + I D + D ++ + +N + I+ + E Sbjct: 177 SGGSI---ETSTGILGTADA-NGDSVYSLDITNFTTGQIQSALSTIE------------- 219 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 LS + A LG I+ + Sbjct: 220 -----------------------------------SALSAMTSAGAQLGSISTRIDLQED 244 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ ++ ID+ + + + + ++LS L + +++ +Q LSI N Sbjct: 245 FVGALSDSIDSGVGRLVDADMEEESSKLSALQTQQQLA------IQSLSIAN 290 >gi|70908057|emb|CAJ17008.1| hypothetical protein Tb11.0330 [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 603 Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 23/184 (12%), Positives = 54/184 (29%), Gaps = 17/184 (9%) Query: 12 FERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSL 71 +R+ + +E L E + G+ G++L R + QE I + Sbjct: 242 TDRLRVAQREGLTRIQVLEERLKEGRLHAVGMELALRSS-----SQELEAIQALNERKAA 296 Query: 72 VTKRLSTSQA-HLSSMQKIVQDMVGPL-VILLEGKTDNNKFPINAGMLRDSYESFVTFAN 129 + +RL S L M++ + ++ + + E + N Sbjct: 297 MYERLDKSCTFALKQMREAAETCEKVQHMLFFRSAEAASTDSSVFRFISCELEKISSALN 356 Query: 130 MTDEGQYL-----FSGINSSEKP---LNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 + ++ G+ S E P + + Q + + + + Sbjct: 357 AS--SAFVRDDMDTKGMASDEAPRCTVAPTAAVPQPPMAAVPQPPMAAVPQPPMAAVPQP 414 Query: 182 HLEV 185 + Sbjct: 415 PMAA 418 >gi|170694401|ref|ZP_02885555.1| flagellar hook-associated protein 3 [Burkholderia graminis C4D1M] gi|170140824|gb|EDT08998.1| flagellar hook-associated protein 3 [Burkholderia graminis C4D1M] Length = 407 Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 49/404 (12%), Positives = 122/404 (30%), Gaps = 52/404 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IS++ F + +L+ ++ +G S ++ +A+ Sbjct: 3 ISSTQYFTMNVATMSDQQAQLSQLYAQISSGVSLSTPSDNPLGAAQAVQLSSTATTLAQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L L S+ ++Q + ++ +G +N A L+ + Sbjct: 63 TSNQNTALASLQLESTTLGSVTDVLQKVHTLVLNAGDGALNNGDRGSIATELQSLRSQLM 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTK----------------DSLAKKSFDQMLQG 168 T AN TD +G YLF+G SS +P N DS ++ D Sbjct: 123 TLANATDPQGNYLFAGYQSSAQPYNTNSAGVVTYSGDTGIPAVQITDSHLVQTSDNGTSI 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKD 228 F + ++ + +++ ++ N+S+++ + + Sbjct: 183 FSSVAPIGTSSVPAGAAANTGTGVIGTVSLNNPTDPTNNNTYSINFSSSTTYTVSQTDPA 242 Query: 229 TEGIDVS--------------------------------ANVNMRGIRDIMFVAVIGTEF 256 T + S + ++ + + Sbjct: 243 TGAVTTSGPQAFTAGSAITLGGQSVTISGAPNAGDSFSVTPATQGSMDVFANLSQLISTL 302 Query: 257 LSK---NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 S + + ++ ++ ++ ++ A +G + + + QN Sbjct: 303 QSPISGGASTASYQSALVTSMTQLENTINNVVTATATVGGRSQEVQALQKVTQNNTLQTA 362 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +S + + + N + + K+Q S+ YL Sbjct: 363 SNLSDLTQTDMIKTVGKYTLAQNAFDTAQQAFVKIQNFSLFQYL 406 >gi|120597312|ref|YP_961886.1| flagellar hook-associated protein 3 [Shewanella sp. W3-18-1] gi|120557405|gb|ABM23332.1| flagellar hook-associated protein 3 [Shewanella sp. W3-18-1] Length = 305 Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 70/197 (35%), Gaps = 12/197 (6%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 V +++ +++ + + + + ++ +S S+ +LSSM + Q M + Sbjct: 45 GVVRVMDNQRDLALVQQYIKNIDSLSTSMSRSETYLSSMVETQQRMKEISIATNSSNLSV 104 Query: 108 NKFPINAGMLRDSYESFVTFAN-MTDEGQYLFSGINSSEKPL-----NGYFTKDSLAKKS 161 A + + + V N + G YLFSG + P+ Y + +++ Sbjct: 105 EDRASYASEMEELLKGLVDNINATDESGNYLFSGNVIDKIPVVKDATGRYVYQGDANQRT 164 Query: 162 FDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHN 221 + N + + Q M D+I L+D A +S A++ Sbjct: 165 VQTSNSSWTTANVTAEQLLFSNAGQDILNQTM-DYISVLKDPSLSPSDPA--FSAAANGI 221 Query: 222 IKYRIKDTEGIDVSANV 238 + +E +D Sbjct: 222 ---QTALSETLDSIGAA 235 >gi|163856442|ref|YP_001630740.1| flagellar hook-associated protein 3 [Bordetella petrii DSM 12804] gi|163260170|emb|CAP42472.1| flagellar hook-associated protein 3 [Bordetella petrii] Length = 405 Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 60/406 (14%), Positives = 130/406 (32%), Gaps = 66/406 (16%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 +ST+ I++ + +L E++ +G+ +D L + + Q + Sbjct: 3 LSTALIYQNGLNGILKQESTLSRLQEQLASGRRVLTPADDPLA----ASLAVNVSQTSSM 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 A + + + L LSS+ +Q ++ +V +D ++ + L S Sbjct: 59 NATYASNRNTAKQTLGLESNALSSVVTTLQSVLQRVVQAGGTLSDPDRQALV-TELEASR 117 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPLN-------GYFTKDSLAKKSFDQMLQGFLEEN 173 + V AN TD GQYLFSG P+ Y + DQ Q + Sbjct: 118 DQLVGLANSTDGNGQYLFSGHQGFSAPVTLDADGNVSYGGDNGQRLIQVDQSRQ-MAGSD 176 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNA---------------- 217 S + G+ S + + +FS + S A Sbjct: 177 VISDIFGKASAGSKAYIVEANEANTGT-GQFSSVSFDTTTGSGANQDFIVTFSDVGGVLH 235 Query: 218 -------SDHNIKYRIKDTEGID---VSANVNMRG---------------IRDIMFVAVI 252 S + + + ID +S +V+ + + + + Sbjct: 236 YTTDTVPSSAPVTAPYVEGQTIDLGGISFSVSGQPAVGDSYTIETPKASNMDMFETLDTL 295 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQ----GLSGIIEQRAVLGISEKNINEERVFLQNK 308 D A L+T + L ++ +A +G + + + ++ Sbjct: 296 IDTLGRSTTNDPAAVAAINNALATANKKLNLTLDNVLTVQASVGARLNEL-DALDAVGSQ 354 Query: 309 NNI-IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + +S V+ ++ ++L ++ + + +Q S+ Sbjct: 355 RTLSYTKQLSNLEDVDVYSVTSELLLRKVALDAASSSFSIIQGSSL 400 >gi|149191160|ref|ZP_01869418.1| flagellar hook-associated protein [Vibrio shilonii AK1] gi|148834998|gb|EDL51977.1| flagellar hook-associated protein [Vibrio shilonii AK1] Length = 294 Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 97/288 (33%), Gaps = 10/288 (3%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ S M + N K+ E+M TG ++ + ++ + + Sbjct: 3 VTDSQFNAVMQRSLMDNNIRLNKVFEQMSTGLKLNHLSDDPIAAVRLEGLKKTVSDNQQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + V +L+ + ++++++++ Q + L+ G D L+ + Sbjct: 63 QRNIENVQSQLTRYETNVNTLEELSQQVNELLLQGKNGTLDAQSRAGIVLELKSLKTEML 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 T N +EG YLFSG + + + + T S + + ++ ++ Sbjct: 123 TTLNQANEGSYLFSGTDITNQAI---STTPPYTLNSNSDYRETKVGDDQYVPSNLTITDI 179 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 NA L++ ++ E ++ A D + + + VS Sbjct: 180 IGTNA-----IFTDLDNAIAELEVPTAGFTPALDSALDTNQALHQNLLVSLTDIGSQYNA 234 Query: 246 I--MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVL 291 + + I F ++ + + + + QG+ + + Sbjct: 235 LDRLKETSIDMVFFAETVRSELEELDYAQASVELNQGMIALEATQKTF 282 >gi|310764853|gb|ADP09803.1| Flagellar hook-associated protein 3, FlgL [Erwinia sp. Ejp617] Length = 302 Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 91/316 (28%), Gaps = 69/316 (21%) Query: 47 ARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKI-VQDMVGPLVILLEGKT 105 + + + + S + + LSS+ K+ +++ LV + G Sbjct: 44 GGAADAVILQNALAKMELYKDARSGARSGMEQEDSTLSSVGKLLTKNLSEKLVAAMNGTL 103 Query: 106 DNNKFPINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ 164 + + ++ + AN D G+Y+FSG + + Sbjct: 104 SEEDRAVLGQEIEGISKNLLDLANTRDGSGRYVFSGFKTGTAAFDE-------------- 149 Query: 165 MLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY 224 + N + H V+ + Q++ + + + + N S AS Sbjct: 150 ------QGNYQGGDTAIHQTVADGSDMQISHLGSDIFMSGTGSDLFKNLQSAAS------ 197 Query: 225 RIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGI 284 E + + + V G+ + Sbjct: 198 ------------------------------ELTKSPIDEEQLKLALGAASKAVDAGIDRL 227 Query: 285 IEQRAVLGISEKNINEERVFLQNKNNI-IDTYISKSIGVEQHTAHAQLSTLINK------ 337 + +A LG + + L + + ++ + K Q++ + Sbjct: 228 GKVQADLGTQLQQL----DALDIQADNDFNSTVGKLQSALGADTSTQINLIQQTKMAEVV 283 Query: 338 IEMSYMITTKLQKLSI 353 +E S + +QK+S+ Sbjct: 284 MEASMKVFQSMQKMSL 299 >gi|228933023|ref|ZP_04095886.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826624|gb|EEM72395.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 287 Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 25/204 (12%), Positives = 66/204 (32%), Gaps = 2/204 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + + ++ + Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANMEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K V V L G + + + V Sbjct: 63 QKDIADSKNVLTQTETALQGVLKSVTRADQLAVQALNGPNGEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN ++G+Y+F G + + P T Q+ G+ + ++ A + Sbjct: 123 YLANTKEQGRYIFGGDSIEKPPFTEDGTYQGGPNDVNWQLNDGYEVKAFRNGEALLSPVI 182 Query: 186 SSMN--AQQMTDFIKQLEDKFSDD 207 ++ ++ M ++ + Sbjct: 183 KTLKQMSEAMQKGDQKALQPLLGE 206 >gi|190890374|ref|YP_001976916.1| flagellin C protein [Rhizobium etli CIAT 652] gi|190695653|gb|ACE89738.1| flagellin C protein [Rhizobium etli CIAT 652] gi|327193049|gb|EGE59961.1| flagellin C protein [Rhizobium etli CNPAF512] Length = 303 Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 60/141 (42%), Gaps = 16/141 (11%) Query: 216 NASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVI-GTEFLSKNLTDGARNVLTKKML 274 +S N+ + + T ID SA + I + + + F S ++ L Sbjct: 166 TSSSGNVLFGMTSTGTIDTSAGIIGTSYGTIGSIYSMDISTFGSVEISM---------AL 216 Query: 275 STVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTL 334 ++++ GL + + + LG I + F+ ++ ID+ + + + + ++L+ L Sbjct: 217 TSIEAGLEAMTKAASQLGSISTRIELQENFVGALSDSIDSGVGRLVDADMEEESSKLTAL 276 Query: 335 INKIEMSYMITTKLQKLSILN 355 + +++ +Q LSI N Sbjct: 277 QTQQQLA------IQSLSIAN 291 >gi|323171071|gb|EFZ56720.1| flagellar hook-associated protein 3 [Escherichia coli LT-68] Length = 298 Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 96/342 (28%), Gaps = 51/342 (14%) Query: 15 MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 M L+ D + E+M TG+ T I + ++++ I + + + Sbjct: 1 MTQSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQYQSNIDSASA 60 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-E 133 LS ++ L + + + L+ G + + ES V N D + Sbjct: 61 GLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMVAALNYQDED 120 Query: 134 GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQM 193 G Y+F G + + P+ S+ + NS V Sbjct: 121 GHYVFGGTINDQPPIVAVDNDGDGVTDSYS------YQGNSDHRQTTVSNGVEVDTNVAA 174 Query: 194 TDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIG 253 +DF D + + Sbjct: 175 SDFFGSNLDVLNTLNS------------------------------------------LS 192 Query: 254 TEFLSKNLTDGARNVLTK--KMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 E N+ V + + V + A LG ++ ++ + + Sbjct: 193 QELQDPNVDPADPQVQSDIQNAVDVVDTASDDLNASIASLGETQNTMSMLSDAQTDISTS 252 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 D I ++ A + L +E + +K+ +L++ Sbjct: 253 NDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 294 >gi|303248232|ref|ZP_07334495.1| flagellar hook-associated protein 3 [Desulfovibrio fructosovorans JJ] gi|302490370|gb|EFL50281.1| flagellar hook-associated protein 3 [Desulfovibrio fructosovorans JJ] Length = 507 Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 60/195 (30%), Gaps = 7/195 (3%) Query: 24 KDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 + +E+ T + + +L + + + + + + L+ + + L Sbjct: 23 ARLMATNEQASTQKRINAPSDDPNGAVQVLGTRTDLSQLGQYQSNITSAKGWLNQADSTL 82 Query: 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINS 143 SS ++ + G A +R + ++ AN T G +F+G + Sbjct: 83 SSTSTLITTIKSYAEQAATGTVTQENRNEIATQIRQYFGQLISLANTTYNGDSIFAGQKT 142 Query: 144 SEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDK 203 + +S D + + ++G E + Q M + Sbjct: 143 NTAAYTQGLWMNSN-----DATFDAAVSASGGFAISGGSDETVLV--QFMGTDPTNYQPA 195 Query: 204 FSDDEYWANNWSNAS 218 F W+N + Sbjct: 196 FQYSSDGGTTWNNGT 210 >gi|218663822|ref|ZP_03519752.1| flagellin C protein [Rhizobium etli IE4771] Length = 353 Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 50/376 (13%), Positives = 113/376 (30%), Gaps = 56/376 (14%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T+ I+ + + L +N K +++ +G + A + +K Sbjct: 1 MTSIITNNGAMAALQTLRA-VNSGLEKTQQQVSSGLRVEKASDNAAYWSIATTMRSDKKA 59 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQK----------IVQDMVGPLVILLEGKTD--NNK 109 ++ S L T+ + +++ Q + P TD + Sbjct: 60 MSAVSDSIGFAKAVLDTTYDGMDKIREELVTIRNLVITAQSLPPPATDGYSNWTDYQPDA 119 Query: 110 FPINAGMLR---------DSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKD-SLAK 159 + + + S V A+ F G+N N D AK Sbjct: 120 IYDRSQIAKVDADIYQHWQQISSIVDSAS--------FGGVNLLR---NDASEPDLPGAK 168 Query: 160 KSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASD 219 F + + + + D W N Sbjct: 169 TEFTTGYVDGQVLTVSIDTKDTTMINYGRTVDNLWNQPGSENMGYVDGVIWNANI----- 223 Query: 220 HNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQ 279 I +D V G + + + + RN M++ + + Sbjct: 224 ------IFPITYVDGGGVVQKNGNIYTLRNSEVRIAANGLD-----RNEYYNGMINQLDE 272 Query: 280 GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIE 339 + ++ +V+G ++K ++ + F Q+ + +D + + + + A A+LS + + Sbjct: 273 RIQAVVGGMSVVGSTQKRVDMQDEFNQSMMDDVDKGVGRLVDADMEEASAKLSATQTQQQ 332 Query: 340 MSYMITTKLQKLSILN 355 ++ +Q L+I N Sbjct: 333 LA------IQALNIAN 342 >gi|23092322|gb|AAN08647.1| FlgL [Aeromonas hydrophila] Length = 402 Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 45/401 (11%), Positives = 119/401 (29%), Gaps = 51/401 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+T+ ++ R N+ +E++ +G + + ++ + +E + + Sbjct: 3 ITTNMVYNRNISSLNNANERLSTAYEQLQSGDKFKTSGEDPSGMSQKMALTKEIDLFKQY 62 Query: 66 LHSNSLVTKRL---STSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 + SL+ L T L++ Q ++ G D L+ Sbjct: 63 GVNGSLLENSLGHEETVLTALNTAMTSAQTLIQKANDSAVGSDDRKAIASELEGLQKQMF 122 Query: 123 SFVTFANMTDEGQYLFSGINSSEKPLNGYFT----------------KDSLAKKSFDQML 166 + N G+++F G S +P + ++ + D Sbjct: 123 DLMNSKNSQ--GEFIFGGNQSKTQPFVQDASGNYLFQGDTGQRNIQVSPTVQIAANDSGF 180 Query: 167 QGF--LEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY 224 F + S +++V + F + D + + + + Sbjct: 181 NLFEIVPTRRTSSAGSANIQVGVADQGNFDSFYRNNYDPALASNQYTVTTAAGAPDTYEI 240 Query: 225 RIKDTEGIDVS--ANVNMRGIRDIMFVAVIGTEFLSKN--LTDGARNVLTKKMLSTVQQG 280 R + N + + ++N L N + M + Sbjct: 241 RDGGGALLQSGDYVAGNKIPFNGLELTLDLPAGGAAQNFVLDSPQNNNILDGMSDFITAL 300 Query: 281 LS----------GIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG--------- 321 + + + + + N+++ + + N ++ + + G Sbjct: 301 RDPNISAHDFQVKVADATSHMKNARLNVDQGLGEIGGRMNSLEQVLGSNEGLSTLNHQAR 360 Query: 322 -----VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + A LS + S + +K+ KL++ +Y+ Sbjct: 361 AKVSEADLYEVIAALSKEDAALSASQLSFSKISKLTLFDYI 401 >gi|307313512|ref|ZP_07593133.1| flagellar hook-associated protein 3 [Escherichia coli W] gi|306906680|gb|EFN37191.1| flagellar hook-associated protein 3 [Escherichia coli W] gi|315059549|gb|ADT73876.1| flagellar hook-filament junction protein [Escherichia coli W] gi|323379892|gb|ADX52160.1| flagellar hook-associated protein 3 [Escherichia coli KO11] Length = 309 Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 109/349 (31%), Gaps = 47/349 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ D + E+M TG+ T I + ++++ I + Sbjct: 3 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + ES V Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ QG + ++ G ++ Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSY--SYQGNSDHRQTTVSNGVEVD 180 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + + L S + + ++ +D ++ I++ Sbjct: 181 TNVAASDFFGSNLDVLNTLNSLSQELQDPNADPADPQVQSDIQN---------------- 224 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + V + A LG ++ ++ Sbjct: 225 ----------------------------AVDVVDTASDDLNASIASLGETQNTMSMLSDA 256 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 257 QTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 305 >gi|254445413|ref|ZP_05058889.1| Bacterial flagellin N-terminus domain protein [Verrucomicrobiae bacterium DG1235] gi|198259721|gb|EDY84029.1| Bacterial flagellin N-terminus domain protein [Verrucomicrobiae bacterium DG1235] Length = 277 Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 51/169 (30%), Gaps = 12/169 (7%) Query: 191 QQMTDFIKQLEDKFSDDEYWANNWS-NASDHNIKYRIKDTEGIDVSANVNMR-------- 241 Q+ D I + + W + S N + N Sbjct: 99 DQLRDIIGNGPNGTNSAPNWNISGSEPTGSFNGISLFGARPDLKAVVGANGDQTMNIGQV 158 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 +R+I S + +V + + T+ + + + + RA LG + + Sbjct: 159 NLREIGGALSDLLWDNSVDSGQADISVDSSTAMDTLIEAVQQVADNRATLGAVQSRLEIV 218 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 LQ ++ + S+ V+ +L+ ++ T L + Sbjct: 219 DAQLQVQSENLTAANSRIRDVDVAEESTRLAKYQILVQSG---TAMLSQ 264 >gi|153834456|ref|ZP_01987123.1| flagellar hook-associated protein 3 [Vibrio harveyi HY01] gi|148869152|gb|EDL68184.1| flagellar hook-associated protein 3 [Vibrio harveyi HY01] Length = 396 Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 57/152 (37%), Gaps = 9/152 (5%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQ 57 T IS+ ++ + + E++ +G+ SD L I Q Sbjct: 1 MLTRISSFHNYQSVQNDLRRQENKVHHNQEQLASGKQLTKPSDDPLA----THYIQSIGQ 56 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 ++ + + L + LV RL + +++ ++ V + + ++ G L Sbjct: 57 QEEQLRQYLDAIVLVRNRLENQEVVVANAEQFVDESKRISMEMINGAFSPEDRAAKKREL 116 Query: 118 RDSYESFVTFANMTD-EGQYLFSGINSSEKPL 148 + +F+ AN D G Y+F+G +P Sbjct: 117 EEIANNFMALANSQDESGNYVFAGTKPKSQPF 148 >gi|238919266|ref|YP_002932781.1| flagellar hook-associated protein 3, [Edwardsiella ictaluri 93-146] gi|238868835|gb|ACR68546.1| flagellar hook-associated protein 3, putative [Edwardsiella ictaluri 93-146] Length = 311 Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 111/356 (31%), Gaps = 56/356 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 +S+S I+++ + + ++ ++ +G+ SD L + ++ Q K+ Sbjct: 3 LSSSMIYQQNMNGVLDAQSEWQRVGAQLDSGKKVINPSDDPLA----ASQLVGLNQSKSM 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDS 120 + + + S ++ L + ++Q+ LV + G + A L Sbjct: 59 NEQYGMARGYARESTSMEESVLQQVTNVLQNATPVLVDGMSSGTKSDEDRAAIATQLSSM 118 Query: 121 YESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 + AN TD G+Y+F+G S+ +P E + + Sbjct: 119 RNQLLNLANSTDGNGRYIFAGYKSNAEPF--------------------VKEASGEIKYV 158 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 G ++ T + D + + A I + +D + + Sbjct: 159 GGKKALTQQVDAARTMIVSHTGDHVFKSDNGKKDIFAALQKAIT---ALNQPLDKATDA- 214 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 + + ++ L + + RA LG ++ Sbjct: 215 ----------------------DKAKVAQALNEANTGLRASLDNVSKVRAELGTQLNELD 252 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + T IS V A + + ++ SY + T +Q +S+ Sbjct: 253 SLDAIGEENAITFKTRISGLQDVNWTQAISDYTFRQVSLQASYKVFTDMQGMSLFK 308 >gi|225871952|ref|YP_002753406.1| putative flagellar protein [Acidobacterium capsulatum ATCC 51196] gi|225792213|gb|ACO32303.1| putative flagellar protein [Acidobacterium capsulatum ATCC 51196] Length = 298 Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 64/196 (32%), Gaps = 1/196 (0%) Query: 13 ERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLV 72 + + +L EE+ G S + V + + + + S Sbjct: 9 NNVAAAIDQTTSVQQQLTEELSNGTSIQQLSDNPSAVGENVSLNSAISSDVQYQQTASSA 68 Query: 73 TKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD 132 L + + L S+ + + G + + A L + ++ AN + Sbjct: 69 QGMLQVTDSALGSVVTQLTSAISLATEGNNGTLNPSNEQAIATQLSGIRDEVLSLANTSY 128 Query: 133 EGQYLFSG-INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQ 191 GQY+FSG +N+ LN + ++ + + L +V + + Sbjct: 129 LGQYVFSGSVNTEPFTLNSSTSPATVTYNGDSAVNTMTTPDGQSISLNLPGNQVFTASGG 188 Query: 192 QMTDFIKQLEDKFSDD 207 + + QL +S + Sbjct: 189 NVLGSLNQLISDYSSN 204 >gi|203284103|ref|YP_002221843.1| flagellar hook-associated protein 3 [Borrelia duttonii Ly] gi|201083546|gb|ACH93137.1| flagellar hook-associated protein 3 [Borrelia duttonii Ly] Length = 424 Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 43/99 (43%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 NL + ++ + L+ + + LS I+ A LG E + L + + + + Sbjct: 325 DNLEENREGLIGSRNLAEIDESLSKILSTLADLGTKENRLELSYARLSKEIMDMKDDMVQ 384 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A L+ ++S ++ ++ + ++L++L Sbjct: 385 YTDLDVTKAITDLNMTSLAYQVSLGVSARIMQTTLLDFL 423 >gi|238917954|ref|YP_002931471.1| flagellar hook-associated protein 3 FlgL [Eubacterium eligens ATCC 27750] gi|238873314|gb|ACR73024.1| flagellar hook-associated protein 3 FlgL [Eubacterium eligens ATCC 27750] Length = 515 Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 7/153 (4%) Query: 199 QLEDKFSDDEYWANNWSN----ASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGT 254 DD NN S+ + I + D + + N + I A+ Sbjct: 353 NTVGTIFDDSN--NNGSSVAGAGTAKTINQEVTDVGTMSIHVGANQDQVIVIDIPAITTY 410 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 + NL + +STV Q ++ E R+ LG E + L N + Sbjct: 411 TLGTDNLNVMTHYT-ASQAISTVDQAITRTNEIRSKLGAYENRFDHTTNNLDVSNENLTK 469 Query: 315 YISKSIGVEQHTAHAQLSTLINKIEMSYMITTK 347 +S I + ++ + + I + Sbjct: 470 SLSTMIDTDMAEEMTTYTSETVLTQAATSILAQ 502 >gi|149015651|gb|EDL75010.1| similar to Laminin alpha-3 chain precursor (Nicein alpha subunit), isoform CRA_b [Rattus norvegicus] Length = 1725 Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 101/347 (29%), Gaps = 57/347 (16%) Query: 10 SIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQ------LGARVTSILEWEQEKNHI- 62 +I + +N +L L E G+ + GL LGA + E + KN + Sbjct: 414 NIRDSLNDYEAKLQDLRSVLQEAAAQGKQA-TGLNHENEGVLGAIQRQMKEMDSLKNDLT 472 Query: 63 -------AERLHSNSLVTKRLSTSQAHLSSMQKI---VQDMVGPLVILLEGKTDNNKFPI 112 A L +NSL+ +R+ TSQ S+ + + V L Sbjct: 473 EHLATADASLLQTNSLL-QRMDTSQKEYESLAAALNGARQELNDQVRELSRSGGKAPLVA 531 Query: 113 NAGMLRDSYESFVTFA-----NMTDEGQYLFSGINSSEK------PLNGYFTKDSLAKKS 161 A S + N + + + ++++ + A + Sbjct: 532 EAEKHAQSLQELAKQLEEIKRNTS-GDELVRCAVDAATAYESILNAIRAAEDAAGKAASA 590 Query: 162 FDQMLQGFLEENSKSLLAGQHLEVSS-MNAQQMTDFIKQLEDKFSDDEYWANNWSNASDH 220 + Q ++E+ + +N +M + + A N S Sbjct: 591 SESAFQTVIKEDLPRRAKTLSSDSEELLNEAKM------TRKRLQQEINPALN----SLQ 640 Query: 221 NIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQG 280 + + + + N+ +R+ + G + + + +K + Sbjct: 641 QTLKTVSVQKDL---LDANVTAVRNDLR----GIQRGDIDSVVSGAKSMVRKANGITSEV 693 Query: 281 LSGIIEQRAVLGISE-----KNINEERVFL---QNKNNIIDTYISKS 319 L G+ + LG + + L N + + Sbjct: 694 LDGLSPIQTDLGRIKDSYGSTRHEDFNKALIDANNSVKKLTKKLPDL 740 >gi|94987190|ref|YP_595123.1| flagellin-like protein [Lawsonia intracellularis PHE/MN1-00] gi|94731439|emb|CAJ54802.1| Flagellin and related hook-associated proteins [Lawsonia intracellularis PHE/MN1-00] Length = 525 Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 33/89 (37%), Gaps = 8/89 (8%) Query: 273 MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLS 332 L ++ I+ Q A +G E + + L +S + ++L Sbjct: 441 ALKDLELAQKNILTQAARIGGKENRLEITKEALDTNKYDQTQRLSGVEDADLTELVSRL- 499 Query: 333 TLINKIEMSYMI----TTKLQKLSILNYL 357 + +M+Y ++ + +L++ Y+ Sbjct: 500 ---AQQQMAYSTILKSSSMIMQLNLTKYI 525 >gi|203287641|ref|YP_002222656.1| flagellar hook-associated protein 3 [Borrelia recurrentis A1] gi|201084861|gb|ACH94435.1| flagellar hook-associated protein 3 [Borrelia recurrentis A1] Length = 424 Score = 41.6 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 43/99 (43%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 NL + ++ + L+ + + LS I+ A LG E + L + + + + Sbjct: 325 DNLEENREGLIGSRNLAEIDESLSKILSTLADLGTKENRLEVSYARLSKEIMDMKDDMVQ 384 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A L+ ++S ++ ++ + ++L++L Sbjct: 385 YTDLDVTKAITDLNMTSLAYQVSLGVSARIMQTTLLDFL 423 >gi|302343764|ref|YP_003808293.1| hypothetical protein Deba_2337 [Desulfarculus baarsii DSM 2075] gi|301640377|gb|ADK85699.1| hypothetical protein Deba_2337 [Desulfarculus baarsii DSM 2075] Length = 606 Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 18/189 (9%), Positives = 60/189 (31%), Gaps = 7/189 (3%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +S + + + + + +L+ + TG ++ + + + Sbjct: 3 VSQMTFYRTSSAQLMRIQTELSRLNNQAATGDIISKPSDAPVSSITVQSATVQLQELDQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 LS + + S + ++Q + + G D++ + A ++ + Sbjct: 63 AIDLEHAKSWLSQATSDFSQLDSLIQQALTLAEQMSTGTMDSSNRQVAAEKVQGLIGDII 122 Query: 126 TFANMTDEGQYLFSGINSSEKP------LNGYFTKDSLAKKSFD-QMLQGFLEENSKSLL 178 N G ++++G + + ++ T S + + + S+ + Sbjct: 123 LICNNEISGSHIYAGTRTDQSAVSSSLKVDDIATPASGNTGTGNIYAFGDYSGLMSRDIT 182 Query: 179 AGQHLEVSS 187 V++ Sbjct: 183 ITADATVAN 191 >gi|293408374|ref|ZP_06652213.1| flagellar hook-associated protein 3 [Escherichia coli B354] gi|291471552|gb|EFF14035.1| flagellar hook-associated protein 3 [Escherichia coli B354] Length = 309 Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 101/351 (28%), Gaps = 51/351 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ D + E+M TG+ T I + ++++ I + Sbjct: 3 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + ++ ES V Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIQSLTESMV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ + NS Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYS------YQGNSDHRQTTVSNG 176 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V +DF D + Sbjct: 177 VEVDTNVAASDFFGSNLDVLNTLNS----------------------------------- 201 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTK--KMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 + E N+ V + + V + A LG ++ ++ Sbjct: 202 -------LSQELQDPNVDPADPQVQSDIQNAVDVVDTASDNLNASIASLGETQNTMSMLS 254 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 255 DAQTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 305 >gi|212709499|ref|ZP_03317627.1| hypothetical protein PROVALCAL_00541 [Providencia alcalifaciens DSM 30120] gi|212687837|gb|EEB47365.1| hypothetical protein PROVALCAL_00541 [Providencia alcalifaciens DSM 30120] Length = 305 Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 59/176 (33%), Gaps = 3/176 (1%) Query: 29 LHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQK 88 ++ +G+ + + + Q +N + + S ++ + L+ M Sbjct: 20 AGSQLASGKRVNKPSDDPQASSQAVRINQSENRNQQYVTSRGFAKTGMTLQMSILTQMTD 79 Query: 89 IVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYLFSGINSSEK 146 + + ++ +G + A + E V N TD G+Y+F+G S + Sbjct: 80 VTTQIDTSIIQASNQGALSDKDRNTLADQITGLKEQLVALGNSTDGNGRYIFAGFKSDKA 139 Query: 147 PLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLED 202 P + D+ + + + + +V + M + K L + Sbjct: 140 PF-EIDADGEVLYHGGDKPITQNVASDREMTTYFTGAQVFETDGAGMVNVFKALNE 194 >gi|149908752|ref|ZP_01897413.1| flagellar hook-associated protein [Moritella sp. PE36] gi|149808294|gb|EDM68233.1| flagellar hook-associated protein [Moritella sp. PE36] Length = 288 Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 105/309 (33%), Gaps = 56/309 (18%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 ++ + E+ ++ + + + LS ++ +++S+ + + + G Sbjct: 33 GTVKLMALQAEQANLKQFNTNIENARRHLSGAETYVTSISDQLGKLRDLTLEAGNGTLTP 92 Query: 108 NKFPINAGMLRDSYESFVTFANM-TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQML 166 A + ES + +N G+YLFSG ++ P+ G + D Sbjct: 93 AGRKAIAQEMEAVKESLLASSNAKGSNGKYLFSGSEVAKAPIAG------PDPVTGDYTY 146 Query: 167 QGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRI 226 G E ++ +G + VS+++ ++ F +D F D + + N ++ Sbjct: 147 VGDNSERKITIASGVKV-VSNIDVEE--TFFDGGKDFFKDLDGYIEKL------NTDSQV 197 Query: 227 KDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIE 286 R +M A+ + + L L+T+ LS II Sbjct: 198 PAD--------------RKVMLAAIDSSADTNLQL------------LTTIGTRLSEII- 230 Query: 287 QRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITT 346 + + + ++ TA +L+ ++ + M+ Sbjct: 231 ----------QTKDTNTDISLYGKNLQ---LSLEQLDYGTASFELAQAELALKTTQMVYV 277 Query: 347 KLQKLSILN 355 K KLS+ N Sbjct: 278 KASKLSLFN 286 >gi|84514826|ref|ZP_01002189.1| flagellar hook-associated protein 3 FlgL [Loktanella vestfoldensis SKA53] gi|84510985|gb|EAQ07439.1| flagellar hook-associated protein 3 FlgL [Loktanella vestfoldensis SKA53] Length = 409 Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats. Identities = 41/405 (10%), Positives = 117/405 (28%), Gaps = 69/405 (17%) Query: 20 KELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTS 79 ++NK+ ++ TG+ + + EQ + + + +RLS Sbjct: 6 SQVNKEIELRQTKISTGREITEASEKPIEAVKLSALEQSLTQLKGFQRNTTTAQQRLSLG 65 Query: 80 QAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFAN---------- 129 L+S+ I+ + + + + S E+ + AN Sbjct: 66 DTVLASVDGIMAQLRERAISANTDTVSASDLAAIRVDVAQSREALIDLANSRTSDDQALF 125 Query: 130 --------------------------------------MTDEGQYLFSGINSS------- 144 + G +F +++S Sbjct: 126 GGYATDIQPFTPDTNGRIQYRGDGGQHTLAASETTRLPTSVNGAEVFMQVDTSDGVASIF 185 Query: 145 -------EKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFI 197 L +L+ + D++ F + ++ S + TD + Sbjct: 186 DIVDSFEAALLTDGSYASTLSADAGDELSLSFNGDRVPRDVSFDLQGPSGSTSITATDVV 245 Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE-GIDVSANVNMRGIRDIM----FVAVI 252 D+ ++ + + + + ++ + ++ ++ Sbjct: 246 GGSHDQLKSAINKKSDETGVIATVVGGHLVLSAATGTIALSALKIEGVELASREPRFTIM 305 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 + + A+ L + Q I R +G K ++ LQ++ + Sbjct: 306 ADGEPPQTMVPTAQT--LDAQLEKLVQAGQDIAVSRTKIGARLKRAEDQEAALQSRALAL 363 Query: 313 DTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +T +++ + +L L+ + + +++ + S+ ++L Sbjct: 364 ETDVNELGSADLGKVVTELQALLVSRDAAMQAYSRIGQSSLFDFL 408 >gi|49184567|ref|YP_027819.1| flagellar hook-associated protein [Bacillus anthracis str. Sterne] gi|65319006|ref|ZP_00391965.1| COG1344: Flagellin and related hook-associated proteins [Bacillus anthracis str. A2012] gi|227815504|ref|YP_002815513.1| putative flagellar hook-associated protein FlgL [Bacillus anthracis str. CDC 684] gi|254683227|ref|ZP_05147088.1| putative flagellar hook-associated protein FlgL [Bacillus anthracis str. CNEVA-9066] gi|254734580|ref|ZP_05192292.1| putative flagellar hook-associated protein FlgL [Bacillus anthracis str. Western North America USA6153] gi|254740988|ref|ZP_05198676.1| putative flagellar hook-associated protein FlgL [Bacillus anthracis str. Kruger B] gi|254755231|ref|ZP_05207265.1| putative flagellar hook-associated protein FlgL [Bacillus anthracis str. Vollum] gi|254759767|ref|ZP_05211791.1| putative flagellar hook-associated protein FlgL [Bacillus anthracis str. Australia 94] gi|49178494|gb|AAT53870.1| flagellin, N-terminus [Bacillus anthracis str. Sterne] gi|227003631|gb|ACP13374.1| putative flagellar hook-associated protein FlgL [Bacillus anthracis str. CDC 684] Length = 207 Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 52/150 (34%), Gaps = 4/150 (2%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLTNIEQM 62 Query: 66 LHSNSLVTKR--LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + R LS ++ L S+ K + + + L G + L + Sbjct: 63 QK--DIADSRNVLSQTENTLQSIVKSLTRVDQLTIQALNGTNSEKELKAIGAELDQLVKQ 120 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 V AN ++G+Y+F G ++ + P T Sbjct: 121 VVYLANTKEQGRYIFGGDSAEKPPFTDDGT 150 >gi|238796910|ref|ZP_04640414.1| Flagellin and hook-associated protein [Yersinia mollaretii ATCC 43969] gi|238719170|gb|EEQ10982.1| Flagellin and hook-associated protein [Yersinia mollaretii ATCC 43969] Length = 298 Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 96/314 (30%), Gaps = 58/314 (18%) Query: 47 ARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKI-VQDMVGPLVILLEGKT 105 A + + ++ ++ + + L L+S+ + +++ +V G Sbjct: 37 AGASQAVIYQNALANMQQFDTARLYAQDALEQEDNTLTSIGHLLTENLSKKIVAGGNGAL 96 Query: 106 DNNKFPINAGMLRDSYESFVTFANMT-DEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ 164 + A L+ ++ + N T G+Y+F G + P + D Sbjct: 97 SDADRQALATELQGIRDNLLDLGNTTNSNGRYIFGGYKTGSAPF-----EKDGTYVGGDT 151 Query: 165 MLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY 224 + + ++++ + +V F+ Sbjct: 152 AMTQHVADSTEMQVGHIGSDV----------FMSG------------------------- 176 Query: 225 RIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGI 284 N + E + + A ++++G+ + Sbjct: 177 -------------SNDDIFAALDSAIAALNEPIVDDADREALQKTLDSANISIKKGIDNL 223 Query: 285 IEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA---HAQLSTLINKIEMS 341 + +A +G + + I+ + + + + +++G + T +Q + S Sbjct: 224 GKVQAQVGTNLQQIDSLAERSAVEQINMQSRLQQTVGSDPSTMITLASQSKMTEFALNSS 283 Query: 342 YMITTKLQKLSILN 355 M+ +QKLSI N Sbjct: 284 MMVFQSMQKLSIFN 297 >gi|90418385|ref|ZP_01226297.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1] gi|90338057|gb|EAS51708.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1] Length = 297 Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 105/352 (29%), Gaps = 67/352 (19%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I+T+ +N + + + TG + A + + + Sbjct: 2 TSINTNVSAMTALQSLSMINNNLNETQSRISTGYRVNAASDNAAYWSIATTMRSDNKALG 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L +L T+ + + +V ++ LV E D K L+ S Sbjct: 62 AVEDALGLGQAKLDTAYTGMKAAIDVVDEIKAKLVAAREPGVDKTKIQAEITELQGQLTS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 T A+ FSG N + + + ++ F Sbjct: 122 IATSAS--------FSGEN--------WLSIGTGIVAGTKTIVSSF-------------N 152 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + + T + + K D + N GI Sbjct: 153 RAADASVSVSTIGVDTTKTKLFDTD------------------------------NTDGI 182 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 D+ GT + +T G + M+S V + L + + LG ++ ++ + Sbjct: 183 LDVGR--TNGTVVSTFTITAGTTDAQVSAMISDVDEALQAMTTAASNLGAAKNRVDIQSE 240 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ + I+ + + + +L L + ++ +Q LSI N Sbjct: 241 FVSTLRDSIEKGVGTLVDADMTEESTRLKALQTQQQLG------VQALSIAN 286 >gi|251789175|ref|YP_003003896.1| flagellar hook-associated protein 3 [Dickeya zeae Ech1591] gi|247537796|gb|ACT06417.1| flagellar hook-associated protein 3 [Dickeya zeae Ech1591] Length = 309 Score = 41.2 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 100/306 (32%), Gaps = 48/306 (15%) Query: 49 VTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN 108 + + Q +N + + + ++ + L+++ + L+ +G ++N Sbjct: 46 ASKAVMVNQAQNQNEQYTLARTFAKNGMNGELSVLTNVVTALTTGSTTLISA-DGTKNDN 104 Query: 109 KFPINAGMLRDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ 167 + A LR + AN TD G Y+F G ++ +P +++ Q + Sbjct: 105 ARQMIATSLRGLKSQLLNLANSTDGNGNYVFGGYKTNVQPFTT-DASGTVSYVGGTQAIS 163 Query: 168 GFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIK 227 ++ N + +V F++ A+ +S Sbjct: 164 QQVDANRIMTVGHIGSDV------------------FNNASGTADIFSA----------- 194 Query: 228 DTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQ 287 +D + + + + + A + +++ L+ + Sbjct: 195 ----LDSAISALETPLE------------GATDAVKSANTASLNGAIQSIRSALTNVSSA 238 Query: 288 RAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTK 347 +A LG+ + I+ ++ +S I ++ + ++ SY + Sbjct: 239 QATLGVQLQEIDTLDSIGTDRTMANKETLSDLIDIDLVATISSYMMQQQSLQASYKAFSD 298 Query: 348 LQKLSI 353 +Q LS+ Sbjct: 299 MQGLSL 304 >gi|315616820|gb|EFU97437.1| flagellar hook-associated protein 3 [Escherichia coli 3431] Length = 309 Score = 41.2 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 108/349 (30%), Gaps = 47/349 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M +L+ D + E+M TG+ T I + ++++ I + Sbjct: 3 VTTQQTYVSMTQSFNDLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + ES V Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ QG + ++ G ++ Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSY--SYQGNSDHRQTTVSNGVEVD 180 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + + L S + + +D ++ I++ Sbjct: 181 TNVAASDFFGSNLDVLNTLNSLSQELQAPNVDPADPQVQSDIQN---------------- 224 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + V + A LG ++ ++ Sbjct: 225 ----------------------------AVDVVDTASDDLNASIASLGETQNTMSMLSDA 256 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 257 QTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 305 >gi|221635455|ref|YP_002523331.1| flagellar hook-associated protein 3 [Thermomicrobium roseum DSM 5159] gi|221157287|gb|ACM06405.1| flagellar hook-associated protein 3 [Thermomicrobium roseum DSM 5159] Length = 291 Score = 41.2 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 43/133 (32%) Query: 24 KDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHL 83 ++++++ + + ++L I + L + L + L Sbjct: 21 ARMERVYQQITSARRISRPSDDPVGTATVLRLGSAAQEIEQYLANVEQARTWLDLTDQAL 80 Query: 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINS 143 +++ + +Q +V + L E T N G+YLF+G + Sbjct: 81 TTIGQSLQRARELVVQAANDTLSADDRQAIWQELTALQEQIATTGNYAHAGRYLFAGSLT 140 Query: 144 SEKPLNGYFTKDS 156 +P + + Sbjct: 141 QTEPFDLSTDPPT 153 >gi|261338457|ref|ZP_05966341.1| YhgE/Pip domain protein [Bifidobacterium gallicum DSM 20093] gi|270276442|gb|EFA22296.1| YhgE/Pip domain protein [Bifidobacterium gallicum DSM 20093] Length = 933 Score = 41.2 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 28/343 (8%), Positives = 93/343 (27%), Gaps = 28/343 (8%) Query: 7 STSS-IFERMNILTKELNKDSVKLHEEMVTGQSS----------DYGLQLGARVTSILEW 55 ST++ + R + + + + + G+ + AR Sbjct: 179 STNAELSNRTDQAIAKTTNELNAAQQSIKDGRDTISELTHTLEQTPERTQAARTAIDQAV 238 Query: 56 EQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNK--FPIN 113 + L L+ +Q + + + LL + + Sbjct: 239 SAASSASTGLKTGQDL----LNQTQTKIGTFSSQASSTLDEGSALLSQASGDTASNITTI 294 Query: 114 AGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEEN 173 + + + + I S + + ++ ++ ++N Sbjct: 295 SSAISSGTGQTGSALTGMQGVNSSMASILSDLQAI-DVSALSPELQQQLQAIITDLQQKN 353 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 + + + L+ +N+ T + + S + N + +I Sbjct: 354 TDTGVIITDLQT--LNSDTQTT--ANTVSALATQTNTSVQDSLRAAGNARTQISTGALPK 409 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI 293 ++ +N + + + ++ + + + +LG Sbjct: 410 LNMGLNSLA----TTAGTLAGGLSGQQSLVEQTRTVLDQLDAVASSAKTALQNTDTLLGT 465 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLIN 336 I+ + L + ++ ++ +GV+ ++ +N Sbjct: 466 MNGRIDTLKTDLTSLSS--ANALTSLLGVDGKLDATTIADFMN 506 >gi|90418384|ref|ZP_01226296.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1] gi|90338056|gb|EAS51707.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1] Length = 319 Score = 41.2 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 112/353 (31%), Gaps = 47/353 (13%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I+T++ +N + + + TG A + + + Sbjct: 2 TSINTNTSAMTALQSLSMINSNLDETQNRISTGFRVGAASDNAAYWSIATTMRSDNKALG 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ +++ +V ++ LV E D K L+ S Sbjct: 62 AVEDALGLGQAKVDTAYTGMNAAIDVVDEIKAKLVAAREPGVDKTKIQSEITELQGQLTS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 T A+ FSG N + + DS A + + + +S ++ + Sbjct: 122 IATSAS--------FSGEN--------WLSVDSTAPANATKSVVASFNRDSAGAVSVGTI 165 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 EV + + F + + +S A + + + Sbjct: 166 EV---DTSKTKLFDAATDAATAGTGILDGMYSAADGSYLADQTAAGFNVST--------- 213 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKM-LSTVQQGLSGIIEQRAVLGISEKNINEER 302 LTD A +V T +S V L + + LG ++ ++ + Sbjct: 214 ------------LDISALTDAAGDVTTLNSYISGVDDALQRMTTAASNLGAAKSRMDIQS 261 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ N + I+ + + + +L L + ++ +Q LSI N Sbjct: 262 EFVSNLRDSIEKGVGTLVDADMTEESTRLKALQTQQQLG------VQALSIAN 308 >gi|149911695|ref|ZP_01900303.1| putative flagellar synthesis; flagellar regulon; hook-associatedprotein [Moritella sp. PE36] gi|149805225|gb|EDM65242.1| putative flagellar synthesis; flagellar regulon; hook-associatedprotein [Moritella sp. PE36] Length = 411 Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 60/407 (14%), Positives = 121/407 (29%), Gaps = 57/407 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ + IF R + + H ++ + A V+ E N + Sbjct: 3 LTNNQIFTRSMQDMSKSQQRLNTAHTQITSLNKYKTSADSPADVSKSTYLNDEINKNTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 ++ ++ L +A LS++ ++ + L G A + + + Sbjct: 63 QKNSLMLKSTLGLEEATLSNIHTAMERGRVLTIRALNGSVGELDLNAIATEINEVQKEIF 122 Query: 126 TFANM-TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ----------------G 168 N G ++FSG S + K + +Q + Sbjct: 123 NLVNTKNANGDHIFSGSASEVQSYTWDANKAQYNFQGNEQDNKIQIASNVFIRNGDNGRE 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKF----SDDEYWANNWSNAS-DHNIK 223 E L+A V +++A ++ + D F D ANN + Sbjct: 183 VFESAPARLIALSDNLVGNVSAAEVRIIDQGEYDNFHRDNYDYAMPANNIFKITVSPPTI 242 Query: 224 YRIKDTEGIDVSANV----------NMRGIRDIMFVAVIGTE-----FLSKNLTD----- 263 DT I S N N+ + A + L+ ++ + Sbjct: 243 PGNSDTYTITDSGNNVQQSGNFMSDNIIRFGGMAMSATGASPGSVDIILAPSINENILNT 302 Query: 264 -GARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG- 321 A + T + GI + + +G ++ + + +NN I+ + Sbjct: 303 LEAFKKVLTDTSITKSEFQDGIADAQLGIGNAKHAVMSVISSIGGRNNAIERITESNESF 362 Query: 322 -------------VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + A L+ N +E SY K+ LS+ N Sbjct: 363 KLINQEAMAILTETDLAAAMTDLTKEQNILETSYKTFNKINNLSLFN 409 >gi|159184370|ref|NP_353593.2| flagellin protein FlaD [Agrobacterium tumefaciens str. C58] gi|2459700|gb|AAB71776.1| FlaD [Agrobacterium tumefaciens] gi|159139683|gb|AAK86378.2| flagellin protein FlaD [Agrobacterium tumefaciens str. C58] Length = 430 Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 M+S V + L + + LG + I+ + F+ + ++ID + + + + + Sbjct: 340 IDMMMSFVDKQLEAMTSTASSLGSLQSRISMQENFVSSLMDVIDKGVGRLVDADMNEEST 399 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +L L + ++ +Q LSI N Sbjct: 400 RLKALQTQQQLG------IQALSIAN 419 >gi|170021353|ref|YP_001726307.1| flagellar hook-associated protein 3 [Escherichia coli ATCC 8739] gi|188492112|ref|ZP_02999382.1| flagellar hook-associated protein 3 [Escherichia coli 53638] gi|169756281|gb|ACA78980.1| flagellar hook-associated protein 3 [Escherichia coli ATCC 8739] gi|188487311|gb|EDU62414.1| flagellar hook-associated protein 3 [Escherichia coli 53638] Length = 309 Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 108/349 (30%), Gaps = 47/349 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ D + E+M TG+ T I + ++++ I + Sbjct: 3 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + ES V Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ QG + ++ G ++ Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSY--SYQGNSDHRQTTVSNGVEVD 180 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + + L S + + + +D ++ I++ Sbjct: 181 TNVAASDFFGSNLDVLNTLNSLSQELQDPDVDPADPQVQSDIQN---------------- 224 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + V + A LG ++ ++ Sbjct: 225 ----------------------------AVDVVDTASDDLNASIASLGETQNTMSMLSDA 256 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 257 QTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 305 >gi|59889787|emb|CAH19143.1| Lateral flagellar hook associated protein 3 (FlgL-like) [Escherichia coli] gi|284920051|emb|CBG33108.1| lateral flagellar hook associated protein 3 (FlgL-like) [Escherichia coli 042] Length = 309 Score = 41.2 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 102/351 (29%), Gaps = 51/351 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ D + E+M TG+ T I + ++++ I + Sbjct: 3 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + ES V Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ + NS Sbjct: 123 VALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYS------YQGNSDHRQTTVSNG 176 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V ++DF D + Sbjct: 177 VEVDTNVAVSDFFGSNLDVLNT-------------------------------------- 198 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTK--KMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 + + E N+ V + + V + A LG ++ ++ Sbjct: 199 ----LNTLSQELQDPNVDPADPQVQSDIQNAVDVVDTASDNLNASIASLGETQNTMSMLS 254 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 255 DAQTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 305 >gi|312879809|ref|ZP_07739609.1| flagellin domain protein [Aminomonas paucivorans DSM 12260] gi|310783100|gb|EFQ23498.1| flagellin domain protein [Aminomonas paucivorans DSM 12260] Length = 1021 Score = 40.8 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 44/129 (34%), Gaps = 5/129 (3%) Query: 229 TEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQR 288 + + V N +G + + ++ R ++ +L V +++ R Sbjct: 897 NQQVQVRTAANQKGQDFFGVLDDLIAAVKGED-----RLGISNFLLGKVTAWGDNLLKCR 951 Query: 289 AVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKL 348 G L+ N + SK V+ A Q + S + +K+ Sbjct: 952 TECGALVNRYENSESRLKENNLNLTELQSKISDVDLAEAATQFQMAQAVYQASLAVISKI 1011 Query: 349 QKLSILNYL 357 + +++++L Sbjct: 1012 VQPTLVDFL 1020 Score = 40.5 bits (93), Expect = 0.38, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 49/151 (32%), Gaps = 16/151 (10%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSS--------DYGLQLGARVTSILEWEQ 57 +S + + M + +++ ++ T + D L T + Sbjct: 5 VSNPMMQQMMLTDMQNNLARMLEIQHQIATQKKFSKPSDNPIDVTRSLAMGTTITENVQY 64 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 ++N L ++ + + + Q + + +G + A L Sbjct: 65 QRNIDDGVTW--------LKNTETSFNQITNVYQQVRQLAIYAGDGGLADVDMGAIAEQL 116 Query: 118 RDSYESFVTFANMTDEGQYLFSGINSSEKPL 148 E AN EG++L SG+++ +P Sbjct: 117 EQLQEEMRCAANYEVEGRFLLSGLSTGIRPF 147 >gi|319443813|pdb|3PWX|A Chain A, Structure Of Putative Flagellar Hook-Associated Protein From Vibrio Parahaemolyticus gi|319443814|pdb|3PWX|B Chain B, Structure Of Putative Flagellar Hook-Associated Protein From Vibrio Parahaemolyticus Length = 239 Score = 40.8 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 1/100 (1%) Query: 51 SILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKF 110 +L E+E + IA+ + + + LS+ + HL S+ + ++ ++ G + Sbjct: 12 KLLNLERENSAIAQYQSNIANLKTTLSSQETHLDSVSESLKSXRDIVLWGANGSLTDQDR 71 Query: 111 PINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLN 149 L+ +S + N DE G +LFSG + LN Sbjct: 72 SGXITELKSYRDSIESSFNAQDEEGHFLFSGTKTDTAALN 111 >gi|90418383|ref|ZP_01226295.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1] gi|90338055|gb|EAS51706.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1] Length = 309 Score = 40.8 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 103/352 (29%), Gaps = 55/352 (15%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I+T+ +N + + + TG A + + + Sbjct: 2 TSINTNVSAMTALQSLSMINSNLDETQNRISTGFRVGAASDNAAYWSIATTMRSDNKALG 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ + + +V +M LV E D +K L+ S Sbjct: 62 AVEDALGLGQAKVDTAYTGMKAAIDVVDEMKSKLVAAREPGVDKSKIQAELKELQGQLTS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + A+ FSG N +G SF++ G + + ++ G Sbjct: 122 IASSAS--------FSGENWLS--FDGAANTSKSVVASFNRSAAGAVSVGTIDIVIGGTK 171 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 L F+ A S ++ I DT+ Sbjct: 172 LFGDDTVGVGGANNGILNTAFTTTGAGAATVSVSTLDITAANIDDTD------------- 218 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 +M+S V + + + LG ++ ++ + Sbjct: 219 --------------------------ISEMISAVDGAIQSMTTGASNLGAAKSRMDIQSE 252 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ N + I+ + + + +L L + ++ +Q LSI N Sbjct: 253 FVSNLRDSIEKGVGTLVDADMTEESTRLKALQTQQQLG------VQALSIAN 298 >gi|254508428|ref|ZP_05120548.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus 16] gi|219548638|gb|EED25643.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus 16] Length = 397 Score = 40.8 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 47/404 (11%), Positives = 120/404 (29%), Gaps = 63/404 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQEKNH 61 IS+ ++ + + ++ +G+ SD L I Q+K Sbjct: 5 ISSFHNYQSVQNDLRRQEGKVHHNQAQLASGKKLMKASDDPLA----THYIQNIGQQKEQ 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + + L RL + +S+ ++ + ++ ++ G + + Sbjct: 61 LRQYSDAIVLTRNRLEHHEVIISNAEEFADEAKRTVMEMINGALSPEDRFAKRREIEEIA 120 Query: 122 ESFVTFANMTD-EGQYLFSGINSSEKPL------------NGYF--------------TK 154 +F+ N+ D G Y+F+G +P + Y Sbjct: 121 NNFLNLVNVQDESGNYIFAGTKPKNQPFFRDKDAEVVYAGDDYQRKMKISNSLEMPINDP 180 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS-SMNAQQMTDFIKQLEDKFSDDEYWA-- 211 S D F + + LE + ++N + + D + + Sbjct: 181 GSKLFMEIDNPFGDFSPKYDLQEASELLLERAINLNPDDQSTYKVTFVDMPNGKYGYQLE 240 Query: 212 NNWSNASDH---------------NIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF 256 + S +K +I + I++ + + Sbjct: 241 RDGSVVQADTFDPSKGIKYEDVTIQVKGQITKGDAIELEPRRTYSIFETFKEAMDLSSGS 300 Query: 257 LSKNLTDGARNVLTKK---MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 +S + + +T++ + + + + + L I E+ + + L Sbjct: 301 VSDSSNTAQLHQVTQEFHAAFIHLNKARTDVGARLNTLDIQEEQHADFEMTLAKSK---- 356 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S ++ A + + ++ S K + L++ NY+ Sbjct: 357 ---SNFEDLDYAAAIIEFNENSRALQASQQAFGKTKDLTLFNYI 397 >gi|301645422|ref|ZP_07245363.1| flagellar hook-associated protein 3 [Escherichia coli MS 146-1] gi|301076306|gb|EFK91112.1| flagellar hook-associated protein 3 [Escherichia coli MS 146-1] Length = 317 Score = 40.8 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 108/349 (30%), Gaps = 47/349 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M +L+ D + E+M TG+ T I + ++++ I + Sbjct: 11 VTTQQTYVSMTQSFNDLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 70 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + ES V Sbjct: 71 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 130 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ QG + ++ G ++ Sbjct: 131 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSY--SYQGNSDHRQTTVSNGVEVD 188 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + + L S + + +D ++ I++ Sbjct: 189 TNVAASDFFGSNLDVLNTLNSLSQELQAPNVDPADPQVQSDIQN---------------- 232 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + V + A LG ++ ++ Sbjct: 233 ----------------------------AVDVVDTASDDLNASIASLGETQNTMSMLSDA 264 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 265 QTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 313 >gi|218671649|ref|ZP_03521318.1| putative flagellin protein [Rhizobium etli GR56] Length = 250 Score = 40.8 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + LST++ LS + A LG I + F+ ++ ID+ + + + + + Sbjct: 159 IQSALSTIESALSAMTSAGAQLGSISTRIELQEDFVSALSDSIDSGVGRLVDADMEEESS 218 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +LS L + +++ +Q LSI N Sbjct: 219 KLSALQTQQQLA------IQSLSIAN 238 >gi|152221|gb|AAA26277.1| flagellin A (flaA) [Sinorhizobium meliloti] Length = 395 Score = 40.8 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 6/89 (6%) Query: 267 NVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHT 326 ++S V L+ + A LG I+ + F+ ++ I++ + + + + + Sbjct: 302 AAALDALISGVDAALTDMTSAAASLGSISSRIDLQSEFVNKLSDSIESGVGRLVDADMNE 361 Query: 327 AHAQLSTLINKIEMSYMITTKLQKLSILN 355 +L L + +++ +Q LSI N Sbjct: 362 ESTRLKALQTQQQLA------IQALSIAN 384 >gi|313905161|ref|ZP_07838530.1| hypothetical protein EubceDRAFT_1245 [Eubacterium cellulosolvens 6] gi|313470064|gb|EFR65397.1| hypothetical protein EubceDRAFT_1245 [Eubacterium cellulosolvens 6] Length = 416 Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 33/74 (44%) Query: 284 IIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYM 343 I LG+ + + + + L + + ++GV+Q+ A ++ + + + Sbjct: 342 ISNTYRQLGMKQAFLEDTQTKLGIVKDTLQKQYDDTLGVDQYQAITKMYSQQYAYQAALK 401 Query: 344 ITTKLQKLSILNYL 357 + + L + S+ +++ Sbjct: 402 VGSNLMQSSLFDFV 415 >gi|150395492|ref|YP_001325959.1| flagellin domain-containing protein [Sinorhizobium medicae WSM419] gi|150027007|gb|ABR59124.1| flagellin domain protein [Sinorhizobium medicae WSM419] Length = 395 Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 38/89 (42%), Gaps = 6/89 (6%) Query: 267 NVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHT 326 ++S V L+ + A LG I+ + F+ ++ ID+ + + + + + Sbjct: 302 AAALDALISGVDAALTDMTSAAASLGSISSRIDLQSEFVNKLSDSIDSGVGRLVDADMNE 361 Query: 327 AHAQLSTLINKIEMSYMITTKLQKLSILN 355 +L L + +++ +Q LSI N Sbjct: 362 ESTRLKALQTQQQLA------IQALSIAN 384 >gi|13124736|sp|P13118|FLAA2_RHIME RecName: Full=Flagellin A gi|12057227|gb|AAB81420.2| FlaA [Sinorhizobium meliloti] Length = 395 Score = 40.8 bits (94), Expect = 0.34, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 6/89 (6%) Query: 267 NVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHT 326 ++S V L+ + A LG I+ + F+ ++ I++ + + + + + Sbjct: 302 AAALDALISGVDAALTDMTSAAASLGSISSRIDLQSEFVNKLSDSIESGVGRLVDADMNE 361 Query: 327 AHAQLSTLINKIEMSYMITTKLQKLSILN 355 +L L + +++ +Q LSI N Sbjct: 362 ESTRLKALQTQQQLA------IQALSIAN 384 >gi|304392499|ref|ZP_07374439.1| flagellin B [Ahrensia sp. R2A130] gi|303295129|gb|EFL89489.1| flagellin B [Ahrensia sp. R2A130] Length = 314 Score = 40.8 bits (94), Expect = 0.34, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 103/352 (29%), Gaps = 50/352 (14%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 + I T++ + N + TG A + + ++ Sbjct: 2 SSILTNTASMTALKTLQATNNALETTQSRISTGLKVQDASDNAAYWSIATTMRSDNKALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L + + L++ +V + LV E D +K L+ S Sbjct: 62 TVQDALGLGAAKSDIAYTGLNAAIDVVDQIKTKLVAAREPGVDKSKIQAELKELQGQLTS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 T + G+ S I+ T L K+ + S L Sbjct: 122 IATS--SSFSGENWLS-IDHDS----DTVTDTDLTKEIVSSFNRDASGSVSVGTLEVNVT 174 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 V+ NA +D + ++ DTE + + + Sbjct: 175 NVALFNANAASDGLLDVDFDI-----------------------DTETVAGTKDQVSVAN 211 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 DI + + M+S V +S + A LG + I + Sbjct: 212 LDISLATITDADI--------------DAMISGVDAAVSSMTSAAANLGATSSRIEMQND 257 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ N + ID +S + + +LS L + ++ +Q LSI N Sbjct: 258 FVGNLMDAIDRGVSALVDADMTAESTRLSALQTQQQLG------IQSLSIAN 303 >gi|218509946|ref|ZP_03507824.1| flagellin C protein [Rhizobium etli Brasil 5] Length = 261 Score = 40.8 bits (94), Expect = 0.34, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + L+T++ LS + A LG I+ + F+ ++ ID+ + + + + + Sbjct: 170 IQSALTTIESALSAMTSAGAQLGSISTRIDLQEDFVGALSDSIDSGVGRLVDADMEEESS 229 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +LS L + +++ +Q LSI N Sbjct: 230 KLSALQTQQQLA------IQSLSIAN 249 >gi|219684714|ref|ZP_03539657.1| flagellar hook-associated protein 3 [Borrelia garinii PBr] gi|219685804|ref|ZP_03540613.1| flagellar hook-associated protein 3 [Borrelia garinii Far04] gi|219672076|gb|EED29130.1| flagellar hook-associated protein 3 [Borrelia garinii PBr] gi|219672637|gb|EED29667.1| flagellar hook-associated protein 3 [Borrelia garinii Far04] Length = 424 Score = 40.8 bits (94), Expect = 0.34, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 42/99 (42%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 L + ++ + L+ + + L ++ A LG E ++ + + + + + Sbjct: 325 DTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKEAADMKEDMVQ 384 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A L+ ++S I+ K+ + ++L+++ Sbjct: 385 YTDLDVTKAITNLNMASLAYQVSLGISAKIMQTTLLDFI 423 >gi|260853473|ref|YP_003227364.1| putative lateral flagellar hook-filament junction protein [Escherichia coli O26:H11 str. 11368] gi|260866419|ref|YP_003232821.1| putative lateral flagellar hook-filament junction protein [Escherichia coli O111:H- str. 11128] gi|257752122|dbj|BAI23624.1| predicted lateral flagellar hook-filament junction protein [Escherichia coli O26:H11 str. 11368] gi|257762775|dbj|BAI34270.1| predicted lateral flagellar hook-filament junction protein [Escherichia coli O111:H- str. 11128] gi|323178486|gb|EFZ64064.1| flagellar hook-associated protein 3 [Escherichia coli 1180] Length = 309 Score = 40.8 bits (94), Expect = 0.34, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 101/349 (28%), Gaps = 47/349 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ D + E+M TG+ T I + ++++ I + Sbjct: 3 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + ES V Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ + NS Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYS------YQGNSDHRQTTVSNG 176 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V +DF D + + N +++ Sbjct: 177 VEVDTNVAASDFFGSNLDVLNTLNSLSQELQNPDVDPADPQVQSD--------------- 221 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + V + A LG ++ ++ Sbjct: 222 -------------------------IQNAVDVVDTASDDLNASIASLGETQNTMSMLSDA 256 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E++ +K+ +L++ Sbjct: 257 QTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEVTLKTYSKVSELNL 305 >gi|291326354|ref|ZP_06124196.2| flagellar hook-associated protein 3 [Providencia rettgeri DSM 1131] gi|291314692|gb|EFE55145.1| flagellar hook-associated protein 3 [Providencia rettgeri DSM 1131] Length = 305 Score = 40.8 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 2/129 (1%) Query: 22 LNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQA 81 + ++ +G+ + + Q +N + + S ++ + Sbjct: 13 AQARWMDAGSQLASGKRVSKPSDDPQASSQAVRINQSENRNQQYVASRGFAKTGMTLQMS 72 Query: 82 HLSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYLFS 139 L+ M + + ++ +G + A L E V N TD G+Y+F+ Sbjct: 73 ILTQMTDVTTQIDTTIIQASNQGALSDKDRNTLAEQLTGLKEQLVALGNSTDGNGRYIFA 132 Query: 140 GINSSEKPL 148 G S + P Sbjct: 133 GFKSDKPPF 141 >gi|224370753|ref|YP_002604917.1| putative flagellin [Desulfobacterium autotrophicum HRM2] gi|223693470|gb|ACN16753.1| putative flagellin [Desulfobacterium autotrophicum HRM2] Length = 692 Score = 40.8 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 54/160 (33%), Gaps = 3/160 (1%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M+ IS I+ + + +E + T + + ++ ++ Sbjct: 1 MRVPNIS---IYSSATYRLGTITSNLQDANEVVSTQKRINSMSDDPIGLSQVMGMNTNLK 57 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 + + + + L T +A L+S + ++ + L ++ A + + Sbjct: 58 GLEQFNRNIDMGKTWLDTGEAALTSTNDSLLELKISIQQLSSAAAGTDQRAAMADNVDNI 117 Query: 121 YESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKK 160 + V N Y+FSG SEKPL + A Sbjct: 118 IKQLVDIGNSQVLDNYIFSGSKISEKPLTFDNELNPTAVV 157 Score = 37.0 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 32/88 (36%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + LS + + + A G+ + N+ + + S + + Sbjct: 605 LTRTLSRLDSHMDQVQSYIADSGLKQNNLEIRVNVMSETTLSVTERRSMVEDADIVQSVM 664 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 L + E + T+K+ +S+++Y+ Sbjct: 665 DLKAIETAYEAALASTSKIMSISLVDYM 692 >gi|210614858|ref|ZP_03290357.1| hypothetical protein CLONEX_02571 [Clostridium nexile DSM 1787] gi|210150500|gb|EEA81509.1| hypothetical protein CLONEX_02571 [Clostridium nexile DSM 1787] Length = 1745 Score = 40.8 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 36/318 (11%), Positives = 89/318 (27%), Gaps = 28/318 (8%) Query: 50 TSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNK 109 +K + + L + + + S+ + Q + +G D+ Sbjct: 1332 AKTDTVNVDKAELKKLLDNKEDTSSWTTDSKQAYDAAIAAGQKVYDSEHAS-KGSVDSAV 1390 Query: 110 FPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQM---- 165 I + + ++ + + L N + + Y S + + + Sbjct: 1391 LAIKNAVADKELKGDMSKLQAALD-KALKDSENYTARTWRVYSNAVSAIETAMENADNTS 1449 Query: 166 -------LQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNAS 218 L S + +E + Q DFI + +E W N A+ Sbjct: 1450 VADVEKLLADLEAAKSALVYNPSAMEECMLAVQAENDFINATDKSIYTEESWNNFV--AA 1507 Query: 219 DHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKM----- 273 ++ I+ + V + ++ + T ++ + L K Sbjct: 1508 KEAVEQLIEKNKTTPVHPSEFKDALKALKDAKEGLTFVPVAPVSKEVLSGLIKTAEGLDA 1567 Query: 274 -------LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHT 326 + + L+ + +E+++ L + T + V+ + Sbjct: 1568 QLYTKDSYQALTEALNAAKAEFDRTDSTEESVKAAVDKLDAAIKALVTRANG-EEVKAYI 1626 Query: 327 AHAQLSTLINKIEMSYMI 344 +L E SY + Sbjct: 1627 NGIELKDASKYTEESYKV 1644 >gi|188025868|ref|ZP_02960117.2| hypothetical protein PROSTU_02025 [Providencia stuartii ATCC 25827] gi|188020804|gb|EDU58844.1| hypothetical protein PROSTU_02025 [Providencia stuartii ATCC 25827] Length = 305 Score = 40.8 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 42/334 (12%), Positives = 93/334 (27%), Gaps = 47/334 (14%) Query: 22 LNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQA 81 + ++ +G+ + + Q +N + + S + + Sbjct: 13 AQARWMDAGSQLASGKRVSKPSDDPQASSQAVRVNQSENRNQQYVASRGFAKTGMLLQMS 72 Query: 82 HLSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYLFS 139 L+ M ++ + ++ +G ++ A L + V N TD G+Y+F+ Sbjct: 73 VLTQMTEVTTQIDTTIIQASNQGSLSDSDRMSLAEQLSGLKDQLVALGNTTDGNGRYIFA 132 Query: 140 GINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQ 199 G S + P D + K ++Q + +MT + Sbjct: 133 GYKSDKPPFEVNAAGDVIYKGGDKAIMQNVSSDR------------------EMTTYFTG 174 Query: 200 LEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSK 259 + F+ D N A + I + S Sbjct: 175 AQ-VFATDSNNVVNVFKALNEGIAALKTPQDQATQS------------------------ 209 Query: 260 NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKS 319 A + V+ L I + G+ + I++ ++ IS+ Sbjct: 210 --EKEAAQKALDSANTAVKSALDKISNIESKQGLQLQEIDQLNFLADTRSIQNSQRISEL 267 Query: 320 IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + + S I L +S+ Sbjct: 268 LDTNWTGVTTDYYKEMAMFQASQDIFKDLNSMSL 301 >gi|291486065|dbj|BAI87140.1| hypothetical protein BSNT_05346 [Bacillus subtilis subsp. natto BEST195] Length = 273 Score = 40.5 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 20/167 (11%), Positives = 54/167 (32%), Gaps = 2/167 (1%) Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGI--DVSANVNMRGI 243 + Q T+ + ++D+ + S ++ N K + +E N Sbjct: 97 AGNTGTQQTEDLTAIKDEMDALTEEIDGISQRTEFNGKKLLDGSETAGFTFQIGANAGQN 156 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 ++ + T K + A + + + ++ + QRA LG + + Sbjct: 157 INVTIGNMDATTLGVKGIDVSADDFSFDTEIVKIDSAITSVSNQRAKLGAVQNRLEHTIN 216 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 L + + S+ V+ ++ + + S + + + Sbjct: 217 NLGASSENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQ 263 >gi|300911991|ref|ZP_07129434.1| cell wall associated fibronectin-binding protein [Staphylococcus aureus subsp. aureus TCH70] gi|300886237|gb|EFK81439.1| cell wall associated fibronectin-binding protein [Staphylococcus aureus subsp. aureus TCH70] Length = 9904 Score = 40.5 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 5693 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 5752 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++S++ QD+ G + L + ++ + + Sbjct: 5753 LNNAQKQDLTSQIEGATTVNGVNSVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 5812 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 5813 TKKTAFDNAITQAESYLNKDH---GTNKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 5869 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ HL A + Q +D + A + NA D +K I D + I Sbjct: 5870 TQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLDNAMDQ-LKQGIADHDTIV 5928 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V + + + Sbjct: 5929 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETSLNG-DSN 5987 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 5988 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6047 Query: 343 M 343 Sbjct: 6048 A 6048 >gi|323976262|gb|EGB71355.1| flagellar hook protein 3 [Escherichia coli TW10509] Length = 309 Score = 40.5 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 108/349 (30%), Gaps = 47/349 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ + + E+M TG+ T I + ++++ I + Sbjct: 3 VTTQQTYVSMTQSFNNLSGELAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + ES V Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ D + QG + ++ G ++ Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIV--AVDDDGDGVTDRYSYQGNSDHRQTTVSNGVEVD 180 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 +DF D + NA ++ N N+ Sbjct: 181 ----TNVAASDFFGSNLDVLNTL--------NALSQELQ-------------NPNVDP-- 213 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 D + ++ V + A LG ++ ++ Sbjct: 214 -----------------ADPQVQSDIQNAVNVVDTASDDLNASIASLGETQNTMSMLSDA 256 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 257 QTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 305 >gi|21283053|ref|NP_646141.1| hypothetical protein MW1324 [Staphylococcus aureus subsp. aureus MW2] gi|81762503|sp|Q8NWQ6|EBH_STAAW RecName: Full=Extracellular matrix-binding protein ebh; AltName: Full=ECM-binding protein homolog; Flags: Precursor gi|21204492|dbj|BAB95189.1| ebh [Staphylococcus aureus subsp. aureus MW2] Length = 9904 Score = 40.5 bits (93), Expect = 0.38, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 5693 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 5752 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++S++ QD+ G + L + ++ + + Sbjct: 5753 LNNAQKQDLTSQIEGATTVNGVNSVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 5812 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 5813 TKKTAFDNAITQAESYLNKDH---GTNKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 5869 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ HL A + Q +D + A + NA D +K I D + I Sbjct: 5870 TQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLDNAMDQ-LKQGIADHDTIV 5928 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V + + + Sbjct: 5929 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETSLNG-DSN 5987 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 5988 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6047 Query: 343 M 343 Sbjct: 6048 A 6048 >gi|229023208|ref|ZP_04179719.1| Flagellar hook-associated protein 3 [Bacillus cereus AH1272] gi|228738133|gb|EEL88618.1| Flagellar hook-associated protein 3 [Bacillus cereus AH1272] Length = 287 Score = 40.5 bits (93), Expect = 0.38, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 54/148 (36%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNANWAKNQMMDLNVQQQYYRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS ++ L + K + + + + G N+ +A + + V Sbjct: 63 QKDIADSRNVLSQTENTLQGIVKSLTRVEQLTLQAVNGTNSPNELKASAAEIDQLLKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++S+ P T Sbjct: 123 YLANKQEQGRYIFGGDSASKPPFAEDGT 150 >gi|296282272|ref|ZP_06860270.1| flagellar hook-associated protein FlgL [Citromicrobium bathyomarinum JL354] Length = 306 Score = 40.5 bits (93), Expect = 0.39, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 101/354 (28%), Gaps = 52/354 (14%) Query: 5 GISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAE 64 +ST + +ER L + L +++ TG+ + + ++E+ A Sbjct: 3 SLSTGAFYERSATQIGSLRSRAESLQKQIGTGERLERSSDDPVAAARLRMLDREERVTAV 62 Query: 65 RLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + + + L + ++ + T +++ A L ES Sbjct: 63 DTRNADQAENNMRFTDEALGQIATMISRARELALHAANATTSDDQRASIATELDGLRESL 122 Query: 125 VTFANM-TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + AN G LF G + + + D + + G + + GQ + Sbjct: 123 LGLANGRNASGHSLFGG-----QAVGNAYDIDPVTGAA---TYAGTPTLDLVEIGEGQTI 174 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + M Q + F + ++ + + R D Sbjct: 175 QP-GMTGQDVFAFSD-------AGGAPTDLFAQLASLSTALRTGGAGAADA--------- 217 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 + L+T+ G + + VLG + Sbjct: 218 --------------------------ARDALTTLDTGFDKVTTAQTVLGSRMAWLEIMSE 251 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + I S G + +L ++ +E S +L L++ + L Sbjct: 252 RRVDNVERITEERSVMGGADPAVTMTRLQEMMTVLEASQASFVRLANLNLFSML 305 >gi|307318919|ref|ZP_07598350.1| flagellin domain protein [Sinorhizobium meliloti AK83] gi|306895333|gb|EFN26088.1| flagellin domain protein [Sinorhizobium meliloti AK83] Length = 395 Score = 40.5 bits (93), Expect = 0.39, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 6/89 (6%) Query: 267 NVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHT 326 ++S V L+ + A LG I+ + F+ ++ I++ + + + + + Sbjct: 302 AAALDALISGVDAALTDMTSAAASLGSISSRIDLQSEFVNKLSDSIESGVGRLVDADMNE 361 Query: 327 AHAQLSTLINKIEMSYMITTKLQKLSILN 355 +L L + +++ +Q LSI N Sbjct: 362 ESTRLKALQTQQQLA------IQALSIAN 384 >gi|111115004|ref|YP_709622.1| flagellar hook-associated protein FlgL [Borrelia afzelii PKo] gi|216263850|ref|ZP_03435844.1| flagellar hook-associated protein 3 [Borrelia afzelii ACA-1] gi|110890278|gb|ABH01446.1| flagellar hook-associated protein 3 [Borrelia afzelii PKo] gi|215979894|gb|EEC20716.1| flagellar hook-associated protein 3 [Borrelia afzelii ACA-1] Length = 424 Score = 40.5 bits (93), Expect = 0.40, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 40/92 (43%) Query: 266 RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 ++ + L+ + + L ++ A LG E ++ + + + + + ++ Sbjct: 332 EELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKETADMKEDMVQYTDLDVT 391 Query: 326 TAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 A L+ ++S I+ K+ + ++L+++ Sbjct: 392 KAITNLNMASLAYQVSLGISAKIMQTTLLDFI 423 >gi|209521597|ref|ZP_03270295.1| flagellar hook-associated protein 3 [Burkholderia sp. H160] gi|209497980|gb|EDZ98137.1| flagellar hook-associated protein 3 [Burkholderia sp. H160] Length = 408 Score = 40.5 bits (93), Expect = 0.40, Method: Composition-based stats. Identities = 48/404 (11%), Positives = 119/404 (29%), Gaps = 52/404 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ F + ++++E+ +GQS ++ +++ Sbjct: 3 ISTAQYFSMNVSTMSDQQAQLSQIYQEISSGQSLTTPADNPLGAAQAVQLSSTAAALSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L + L+S+ +Q + + G ++ A L + + Sbjct: 63 STNQTTALSSLRAEDSTLTSVITTLQSANTLGLSVGSGTLNDTNRSAIAAQLTTLRDQLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTK----------------DSLAKKSFDQMLQG 168 T+AN TD G +F+G +S K DS + D + Sbjct: 123 TYANATDGSGNAMFAGFQNSTKAFTTNAAGTVVYSGDTGTRTVQVTDSNSVAIGDNGMSV 182 Query: 169 FLEENSKSLLAGQHLEVSSMNAQQMT----DFIKQLEDKFSDDEYWANNWSNASDHNIKY 224 F+ + + S+ + + S ++ + S+ + Sbjct: 183 FMSVGATNAEPIASGSSSNTGTGVIGPVTVTNPTNTANADSYQIQFSGSGSSLTYTVTDT 242 Query: 225 RIKDTEGIDVSAN---------------------------VNMRGIRDIMFVAVIGTEFL 257 + N G + + T Sbjct: 243 TTGVAGTAQTYTSGSNITVGGQTVDITGTPAANDTFTVQPANKAGTNVFANLNAMITALQ 302 Query: 258 SKNLTDGARNVLTKKMLST----VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 + A + ++T + L+ I +A +G E+ + + Q + Sbjct: 303 QPVTGNDAAAATLQNAMNTGLSQLANTLNNITAVQASVGGREQEVEALQTVTQTNSTQTA 362 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + ++ + ++ + ++ S K+Q +S+ +Y+ Sbjct: 363 SNLADLTSTDMTKTISKYTLTQEALQASQQAFVKIQGMSLFDYI 406 >gi|218703532|ref|YP_002411051.1| lateral flagellar hook associated FlgL-like protein [Escherichia coli UMN026] gi|293403362|ref|ZP_06647453.1| predicted protein [Escherichia coli FVEC1412] gi|298378973|ref|ZP_06988854.1| predicted protein [Escherichia coli FVEC1302] gi|218430629|emb|CAR11495.1| Lateral flagellar hook associated protein 3 (FlgL-like) [Escherichia coli UMN026] gi|291429215|gb|EFF02235.1| predicted protein [Escherichia coli FVEC1412] gi|298280086|gb|EFI21590.1| predicted protein [Escherichia coli FVEC1302] Length = 309 Score = 40.5 bits (93), Expect = 0.41, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 101/351 (28%), Gaps = 51/351 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ D + E+M TG+ T I + ++++ I + Sbjct: 3 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + ES V Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ + NS Sbjct: 123 VALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYS------YQGNSDHRQTTVSNG 176 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V +DF D + Sbjct: 177 VEVDTNVAASDFFGSNLDVLNT-------------------------------------- 198 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTK--KMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 + + E N+ V + + V + A LG ++ ++ Sbjct: 199 ----LNTLSQELQDPNVDPADPQVQSDIQNAVDVVDTASDNLNASIASLGETQNTMSMLS 254 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 255 DAQTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 305 >gi|331671811|ref|ZP_08372607.1| flagellar hook-associated protein 3 [Escherichia coli TA280] gi|331070800|gb|EGI42159.1| flagellar hook-associated protein 3 [Escherichia coli TA280] Length = 317 Score = 40.5 bits (93), Expect = 0.42, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 100/351 (28%), Gaps = 51/351 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ D + E+M TG+ T I + ++++ I + Sbjct: 11 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 70 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + ES V Sbjct: 71 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 130 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ + NS Sbjct: 131 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYS------YQGNSDHRQTTVSNG 184 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V +DF D + Sbjct: 185 VEVDTNVAASDFFGSNLDVLNTLNS----------------------------------- 209 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTK--KMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 + E N+ V + + V + A LG ++ ++ Sbjct: 210 -------LSQELQDPNVDPADPQVQSDIQNAVDVVDTASDNLNASIASLGETQNTMSMLS 262 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 263 DAQTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 313 >gi|224532221|ref|ZP_03672853.1| flagellar hook-associated protein 3 [Borrelia valaisiana VS116] gi|224511686|gb|EEF82092.1| flagellar hook-associated protein 3 [Borrelia valaisiana VS116] Length = 424 Score = 40.5 bits (93), Expect = 0.42, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 42/99 (42%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 L + ++ + L+ + + L ++ A LG E ++ + + + + + Sbjct: 325 DTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKEAADMKEDMVQ 384 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A L+ ++S I+ K+ + ++L+++ Sbjct: 385 YTDLDVTKAITNLNMASLAYQVSLGISAKIMQTTLLDFI 423 >gi|318604260|emb|CBY25758.1| flagellar hook-associated protein FlgL [Yersinia enterocolitica subsp. palearctica Y11] Length = 293 Score = 40.5 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 55/142 (38%), Gaps = 4/142 (2%) Query: 219 DHNIKYRIKDTEGID--VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLST 276 D + I E D S + + + + + + + + ++ A N L+ Sbjct: 153 DAVVGNGITLQENTDLSSSLSASGNNLEILTNLKKLANKMIDSSIKPAAYNQEISDNLAA 212 Query: 277 VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS-KSIGVEQHTAHAQLSTLI 335 ++ G I LG + + L + I++ + G++ ++ + + Sbjct: 213 IEIGAKKIGGMLTDLGAKQNRLEH-LSNLHDDVEIVNANLEKDLAGIDILQVNSAMQSNF 271 Query: 336 NKIEMSYMITTKLQKLSILNYL 357 ++++ + K+ +LS+ NY+ Sbjct: 272 LSTKIAHSMQAKISQLSLFNYI 293 >gi|51598443|ref|YP_072631.1| flagellar hook-associated protein FlgL [Borrelia garinii PBi] gi|51573014|gb|AAU07039.1| flagellar hook-associated protein 3 [Borrelia garinii PBi] Length = 424 Score = 40.5 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 42/99 (42%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 L + ++ + L+ + + L ++ A LG E ++ + + + + + Sbjct: 325 DTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKEAADMKEDMVQ 384 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A L+ ++S I+ K+ + ++L+++ Sbjct: 385 YTDLDVTKAITNLNMASLAYQVSLGISAKIMQTTLLDFI 423 >gi|225352442|ref|ZP_03743465.1| hypothetical protein BIFPSEUDO_04064 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156949|gb|EEG70318.1| hypothetical protein BIFPSEUDO_04064 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 927 Score = 40.5 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 89/309 (28%), Gaps = 43/309 (13%) Query: 54 EWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN 113 ++ I SN + ++ S L ++ K + + + +N Sbjct: 219 TLDKALTTIDSAKQSNIALASEITNS---LDTVGKASDLLSETRT---QTERFSNTLVGA 272 Query: 114 AGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEEN 173 N+++ + SG+N+++ L+ + + +L G + Sbjct: 273 LDNGSTQLSGL--QVNVSNATGTVLSGLNTTQDALDQVSSTMHRINTTTGTVLDGVEKAL 330 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 S L ++AQ + + D A D + I + Sbjct: 331 QASQLDPNSQTYKDLSAQLAEARKQLTFQQQRID---------AFDQDTTAAINAGKNTA 381 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGII----EQRA 289 N ++ + ++ AR +T ++ + GL + Sbjct: 382 NGFNDDVTTLAKNGTASM-----------TSARTTITGTVMPNLNTGLDTLSLANGSLSG 430 Query: 290 VLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEM------SYM 343 L + + + L + + + G QL+ L ++ + Sbjct: 431 TLTTLQSTLEQGNGLLDQLSRTVTQTNTTIAG-----TQTQLANLAKQLNTTRTDVAALS 485 Query: 344 ITTKLQKLS 352 + Q+LS Sbjct: 486 SSAMFQQLS 494 >gi|227820867|ref|YP_002824837.1| putative flagellin A [Sinorhizobium fredii NGR234] gi|227339866|gb|ACP24084.1| putative flagellin A [Sinorhizobium fredii NGR234] Length = 305 Score = 40.5 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 272 KMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQL 331 + L+ V+ GL + + LG I + F+ + ID+ I + + + + +L Sbjct: 216 EALTLVEDGLQAMTSAASELGSISMRIGLQEDFVAALTDSIDSGIGRLVDADMNEESTRL 275 Query: 332 STLINKIEMSYMITTKLQKLSILN 355 L + +++ +Q LSI N Sbjct: 276 KALQTQQQLA------VQSLSIAN 293 >gi|86139958|ref|ZP_01058523.1| secreted hemolysin-type calcium-binding bacteriocin, putative [Roseobacter sp. MED193] gi|85823376|gb|EAQ43586.1| secreted hemolysin-type calcium-binding bacteriocin, putative [Roseobacter sp. MED193] Length = 3377 Score = 40.5 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 38/384 (9%), Positives = 97/384 (25%), Gaps = 65/384 (16%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T ++ + + + ++L E+ Q+ +GA + + +Q L Sbjct: 163 TGNVDQALELQRQQLQSALDTASAELAAAQN-----NVGAMTSDKADADQTVTDAQTTLD 217 Query: 68 SNSLVTKRLSTS-------------QAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114 + + L +S Q L Q + G L Sbjct: 218 AAAATMSLLQSSGQVGDAQAALSLAQTALIQSQNALNAAQGELDTATTSAASMLSMRDAK 277 Query: 115 GMLRDSYESFVTFANMTDEG-QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEEN 173 + ++ T A+ + L S + ++A+ + D Sbjct: 278 QTEVTNLQNQKTTADQELATTEALLSDAQDALLLETNGADAVTVAQTAVDDATTAVNAAQ 337 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 + L+ + + ++ +D +D + A+D R D Sbjct: 338 THVNELDGQLQQAQSELDGLNAQLQTAQDAVTDTQARVTAAEQAADETQTARDSAQALFD 397 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTD------------------------------ 263 + + ++ + +L D Sbjct: 398 TEVT--EQASAQVEMLSALNVYLSGGSLADFSVASAAYSAAREEKLAAETALADAISADD 455 Query: 264 ----------GARNVLTKKMLSTVQQGLSGIIE---QRAVLGISEKNINEERVFLQN-KN 309 A + ++ + Q + I LG + ++ + L + Sbjct: 456 AADQLAATENAALSTAQSQVTTLTGQRDAAITTRDGLNTQLGAANTVLSTAQGNLSTVQQ 515 Query: 310 NIIDTYISKSIGVEQHTAHAQLST 333 +++ + ++ A Q Sbjct: 516 DLLTAQQNNQAYIDAQEAVTQAQA 539 >gi|260949193|ref|XP_002618893.1| hypothetical protein CLUG_00052 [Clavispora lusitaniae ATCC 42720] gi|238846465|gb|EEQ35929.1| hypothetical protein CLUG_00052 [Clavispora lusitaniae ATCC 42720] Length = 1411 Score = 40.5 bits (93), Expect = 0.44, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 50/176 (28%), Gaps = 13/176 (7%) Query: 92 DMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGY 151 + L G + NN G F + AN T LF N+ KP G Sbjct: 53 NTQQNANTGLFGNSSNNASTTLPGSTSSGL--FGSSANNTSNNGGLFG--NTGSKPTGGL 108 Query: 152 FTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEY-- 209 F + + + L F NS S G L +S + + Sbjct: 109 FGNTNSSSAAAGGGL--FGNTNSSSSTTGGGLFGTSASNPTSNTGTSNTSGGLFGNSNKP 166 Query: 210 -----WANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKN 260 + ++ S A+ + T + ++ + A G F + Sbjct: 167 ATGGLFGSSNSTANTGGLFGHPNTTATGNSNSTAAGGLFGNSNSTATTGGLFGAST 222 >gi|170703621|ref|ZP_02894362.1| flagellar hook-associated protein 3 [Burkholderia ambifaria IOP40-10] gi|170131467|gb|EDT00054.1| flagellar hook-associated protein 3 [Burkholderia ambifaria IOP40-10] Length = 413 Score = 40.5 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 51/143 (35%), Gaps = 3/143 (2%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 ++ +++ + + L L S+ ++ + +V +G + Sbjct: 45 GAAQAVQLSMTSATLSQYATNQTAALASLQAEDQALQSVSGVLTSVQTLVVRAGDGSLAD 104 Query: 108 NKFPINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQML 166 + A L+ + +T AN D G YLF+G+N+S P + + D Sbjct: 105 SDRSALATQLQGYRDQLMTLANSNDGAGNYLFAGLNNSSAPFT--SSPNGSVSYVGDSGT 162 Query: 167 QGFLEENSKSLLAGQHLEVSSMN 189 + +S S+ G M+ Sbjct: 163 RQVQIADSSSVAQGDTGSAVFMS 185 >gi|148980295|ref|ZP_01815982.1| flagellar hook-associated protein [Vibrionales bacterium SWAT-3] gi|145961314|gb|EDK26624.1| flagellar hook-associated protein [Vibrionales bacterium SWAT-3] Length = 294 Score = 40.5 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 97/288 (33%), Gaps = 10/288 (3%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ S M + N K+ E+M TG ++ + ++ + + Sbjct: 3 VTDSQFNAVMQRSLMDNNIRLNKVFEQMSTGLRINHLSDDPIAAVRLEGLKKTVSDNQQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + V +L+ + ++++++ + Q + L+ G D+ L+ + Sbjct: 63 QRNIENVQSQLTRYETNVNTLESLSQQVNELLLQGKNGTLDSESRAGIVLELKSLKTEML 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 N +EG YLFSG + S ++ + + G + +L + Sbjct: 123 NTLNQANEGSYLFSGTDISNPAIDTAPPYTLNPNSDYRETKVGDNQYVPSNLTITDTIGS 182 Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 S++ L++ S+ E ++ A D+ + + + VS Sbjct: 183 SAI--------FTDLDNAISELELATGGFTTALDNALNTNQALHQDLLVSLTDIGSQYNA 234 Query: 246 I--MFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVL 291 + + I F ++ + + + + QG+ + + Sbjct: 235 LERLKETSIDMVFFAETVRSELEELDYAEASVELNQGMIALEATQKTF 282 >gi|300936134|ref|ZP_07151073.1| flagellar hook-associated protein 3 [Escherichia coli MS 21-1] gi|300458712|gb|EFK22205.1| flagellar hook-associated protein 3 [Escherichia coli MS 21-1] Length = 317 Score = 40.1 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 100/349 (28%), Gaps = 47/349 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ + E+M TG+ T I + ++++ I + Sbjct: 11 VTTQQTYVSMTQSFNNLSGSLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 70 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + ++ ES V Sbjct: 71 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIQSLTESMV 130 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ + NS Sbjct: 131 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYS------YQGNSDHRQTTVSNG 184 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V +DF D + + N +++ Sbjct: 185 VEVDTNVAASDFFGSNLDVLNTLNSLSQELQNPDVDPADPQVQSD--------------- 229 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + V + A LG ++ ++ Sbjct: 230 -------------------------IQNAVDVVDTASDDLNASIASLGETQNTMSMLSDA 264 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 265 QTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 313 >gi|158422976|ref|YP_001524268.1| flagellin [Azorhizobium caulinodans ORS 571] gi|158329865|dbj|BAF87350.1| flagellin [Azorhizobium caulinodans ORS 571] Length = 366 Score = 40.1 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 102/352 (28%), Gaps = 12/352 (3%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T++ + +N ++ + TG+ + A + + Sbjct: 16 TSIITNNAASVALATLRSINDSLNTTNDRVSTGKKINSAADGAAYWNISTTLTSDNGALG 75 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + +L + T+ ++ + + + LV D N +S Sbjct: 76 AVKDAINLDLASVKTTNTGVTQIMNSLNTIKQALVSAQSSTADRTSLQKNIANAVSDIKS 135 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + A G S K LA S + + + Sbjct: 136 AASSA--VVNGANWLS---VDSSATGFNANKSLLANFSRTSGVVSVGSTTLDTGAFAVYD 190 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 ++ A + I + + + + A N + S + ++ G Sbjct: 191 AKTNGTATGTSSTIDKAVTAVATSATVSGGLTVAVGTNAGNLKGFMDT-TYSISGSVGGT 249 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 F A I +S + + V + G+ LG ++ + ++ Sbjct: 250 TVAAFTASIADIDISALTSSDVDLAKLSSYMKIVSATIDGLQNGSTALGTTQTRLTSQQS 309 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F Q+ +I + I + +L L + +++ +Q LSI N Sbjct: 310 FAQSLIDINTSSIGSLVDANMEEESTKLKALQTQQQLA------VQSLSIAN 355 >gi|225618971|ref|YP_002720197.1| flagellar hook-associated protein FlgL [Brachyspira hyodysenteriae WA1] gi|225213790|gb|ACN82524.1| flagellar hook-associated protein FlgL [Brachyspira hyodysenteriae WA1] Length = 417 Score = 40.1 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 53/157 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++ + F R K + + TGQ Y Q + + ++ + + Sbjct: 3 VTEQAQFNRTVSTIKRNYNEMEASQTRLSTGQRVQYPHQNVTSTINSIYYKTRMSSVDRY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + ++LS + +S++ + + + + A + + E Sbjct: 63 QSNIVDGKEKLSVAHDSMSAITEALNRARDLAIQGANSTYGADDRAKMAMEVEEMIERIY 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF 162 + +G+Y+FSG + P + D A +S Sbjct: 123 DISKTQSKGEYIFSGTSIKTAPFRALYGHDEKAGRSI 159 Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 12/102 (11%), Positives = 34/102 (33%), Gaps = 1/102 (0%) Query: 256 FLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 L D R + + L + L + +A ++ +++ I+ Sbjct: 316 LRDAMLNDDVR-AIGSEALGYIDSSLDNVATVQANASSKVTRLDMGYASFEDQKLAIEEA 374 Query: 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++K+ ++ + S +L ++++YL Sbjct: 375 LAKNENIDYAEEIVNFNMWQYAHNASLQTAGRLLGRTLMDYL 416 >gi|315122277|ref|YP_004062766.1| flagellin domain-containing protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495679|gb|ADR52278.1| flagellin domain-containing protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 457 Score = 40.1 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 6/90 (6%) Query: 266 RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 K+MLS + Q L + +G I+ + F++ + ++ I + + + Sbjct: 362 EATTMKEMLSFIDQKLKLVTSAAGKIGSISSRIHLQEDFVKFMRDAVEKGIGRLVDADMA 421 Query: 326 TAHAQLSTLINKIEMSYMITTKLQKLSILN 355 ++LS L + +++ +Q LSI+N Sbjct: 422 DESSKLSALQTQQQLA------IQALSIVN 445 >gi|225552502|ref|ZP_03773442.1| flagellar hook-associated protein 3 [Borrelia sp. SV1] gi|225371500|gb|EEH00930.1| flagellar hook-associated protein 3 [Borrelia sp. SV1] Length = 424 Score = 40.1 bits (92), Expect = 0.50, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 42/99 (42%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 L + ++ + L+ + + L ++ A LG E ++ + + + + + Sbjct: 325 DTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKEAADMKEDMVQ 384 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A L+ ++S I+ K+ + ++L+++ Sbjct: 385 YTDLDVTKAITNLNMASLAYQLSIGISAKIMQTTLLDFI 423 >gi|300899459|ref|ZP_07117707.1| flagellar hook-associated protein 3 [Escherichia coli MS 198-1] gi|300356938|gb|EFJ72808.1| flagellar hook-associated protein 3 [Escherichia coli MS 198-1] Length = 317 Score = 40.1 bits (92), Expect = 0.50, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 101/351 (28%), Gaps = 51/351 (14%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ D + E+M TG+ T I + ++++ I + Sbjct: 11 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 70 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + ES V Sbjct: 71 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 130 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ + NS Sbjct: 131 VALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYS------YQGNSDHRQTTVSNG 184 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V +DF D + Sbjct: 185 VEVDTNVAASDFFGSNLDVLNT-------------------------------------- 206 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTK--KMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 + + E N+ V + + V + A LG ++ ++ Sbjct: 207 ----LNTLSQELQDPNVDPADPQVQSDIQNAVDVVDTASDNLNASIASLGETQNTMSMLS 262 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 263 DAQTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 313 >gi|254723816|ref|ZP_05185602.1| flagellar hook-associated protein FlgL [Bacillus anthracis str. A1055] Length = 287 Score = 40.1 bits (92), Expect = 0.50, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 51/148 (34%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLTNIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS ++ L S+ K + + + L G + L + V Sbjct: 63 QKDIADSRNVLSQTENTLQSIVKSLTRVDQLTIQALNGTNSEKELKAIGAELDQLVKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 123 YLANTKEQGRYIFGGDSAEKPPFTDDGT 150 >gi|218661981|ref|ZP_03517911.1| flagellin C protein [Rhizobium etli IE4771] Length = 310 Score = 40.1 bits (92), Expect = 0.50, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 98/326 (30%), Gaps = 44/326 (13%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 + +NK++ + +++ +G + + + + ++ + L ++ Sbjct: 7 LRSINKEASQTQQQVSSGYRIETAADDASYWSVATVMRSDSTNLGTIGDALGLGAAKVDA 66 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 + ++S +V + LV E TD +K ++ + V + G+ Sbjct: 67 TYTAMTSAIDLVTQIRAKLVAAREPGTDKDKINAEISEYKEQLRTVVES--TSFAGE--- 121 Query: 139 SGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 + A ++ GF+ + A SS Sbjct: 122 -----------NWLLNSDKAAPPTWSVISGFVRAPTGEYQAQSIDFPSSQT--------- 161 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFV---AVIGTE 255 D AS I + N + G R+ + + Sbjct: 162 ----ILIDKNN-------ASGGLFTKAIDA-----QAINNSGTGPRNYYLLDADSTTPAT 205 Query: 256 FLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 + + ML LS + A +G+ + I+++ + + ++ ID Sbjct: 206 GTEVAIGKNTTDAQLADMLDVTDSLLSSLTTTSASIGVMKARIDDQIDYTADLSDSIDKS 265 Query: 316 ISKSIGVEQHTAHAQLSTLINKIEMS 341 + + + A + + + +M+ Sbjct: 266 VGALVDTDMDEASIRQKAIETQKQMA 291 >gi|190892543|ref|YP_001979085.1| flagellin C protein [Rhizobium etli CIAT 652] gi|190697822|gb|ACE91907.1| flagellin C protein [Rhizobium etli CIAT 652] Length = 332 Score = 40.1 bits (92), Expect = 0.50, Method: Composition-based stats. Identities = 37/315 (11%), Positives = 94/315 (29%), Gaps = 27/315 (8%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 +++N++ + TG + + ++ + + + T Sbjct: 16 LRDINRNMTVTQNHVTTGMRVAKAADNAVYWSIATTARTDNKAVSAIQDALGMAAATMGT 75 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 + + ++ +V ++ LV E D +K L++ S A + + Sbjct: 76 AYTGVQNVIDVVSEIKAKLVAATEDGVDKSKIDEEIKQLQEQLRSVSESATFNSDNWVI- 134 Query: 139 SGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 +N+ P S + + + G L + + G + + ++ Sbjct: 135 --LNNDATPTQPRQIPASFIRNADGTISVGMLSYHIDNTPVG-------ATSSKDARYLI 185 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLS 258 S + + A++ + S N G + Sbjct: 186 DDRATGSGEYGVLTSAYFATELGT----SQDYVLMTSKNGTTTG-------------QVV 228 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 +L+ +M+S V L+ + + G EK I + F ++ I I + Sbjct: 229 ISLSSSTTKGQVSEMISVVDAALTQLTTVGSAFGALEKRIELQNDFATKLHDNITAGIGR 288 Query: 319 SIGVEQHTAHAQLST 333 + + ++L Sbjct: 289 LVDADMEEESSRLRA 303 >gi|170681553|ref|YP_001742380.1| lateral flagellar hook associated protein 3 [Escherichia coli SMS-3-5] gi|170519271|gb|ACB17449.1| lateral flagellar hook associated protein 3 [Escherichia coli SMS-3-5] Length = 309 Score = 40.1 bits (92), Expect = 0.52, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 100/349 (28%), Gaps = 47/349 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ + E+M TG+ T I + ++++ I + Sbjct: 3 VTTQQTYVSMTQSFNNLSGSLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + ++ ES V Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIQSLTESMV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ + NS Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYS------YQGNSDHRQTTVSNG 176 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V +DF D + + N +++ Sbjct: 177 VEVDTNVAASDFFGSNLDVLNTLNSLSQELQNPDVDPADPQVQSD--------------- 221 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + V + A LG ++ ++ Sbjct: 222 -------------------------LQNAVDVVDTASDDLNASIASLGETQNTMSMLSDA 256 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 257 QTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 305 >gi|327194121|gb|EGE60993.1| flagellin C protein [Rhizobium etli CNPAF512] Length = 292 Score = 40.1 bits (92), Expect = 0.55, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + L+T++ LS + A LG I+ + F+ ++ ID+ + + + + + Sbjct: 201 IQSALTTIESALSAMTSAGAQLGSISTRIDLQEDFVGALSDSIDSGVGRLVDADMEEESS 260 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +LS L + +++ +Q LSI N Sbjct: 261 KLSALQTQQQLA------IQSLSIAN 280 >gi|300765794|ref|ZP_07075769.1| cell wall surface anchor family protein [Listeria monocytogenes FSL N1-017] gi|300513488|gb|EFK40560.1| cell wall surface anchor family protein [Listeria monocytogenes FSL N1-017] Length = 2028 Score = 40.1 bits (92), Expect = 0.55, Method: Composition-based stats. Identities = 33/288 (11%), Positives = 78/288 (27%), Gaps = 25/288 (8%) Query: 50 TSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIV----QDMVGPLVILLEGKT 105 L + + NS RL + Q + + I Q V PL + + Sbjct: 1332 AQALTLAKTAAFEEVKDGVNSSAEDRLDSVQVSQTQLDAIKNGSNQGGVYPLTYSITKDS 1391 Query: 106 DNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKP----LNGYFTKDSLAKKS 161 I + +D + + G + N D S Sbjct: 1392 KTVSVTIQVTVAKD-LTAVNAHDSTIYIGDAWEAKDNFDSATNKEGATDIAFSDVTVTGS 1450 Query: 162 FDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA--NNWSNASD 219 + + G + + V + + + + + W +N+ +A D Sbjct: 1451 VNTAVAGVYPVTYTYNGVSKKINV---TVKAIKTAVNAHDSTIYTGDTWNARDNFDSALD 1507 Query: 220 HNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQ 279 + + S N N G I + ++ ++ + + + + Sbjct: 1508 KDGNSVAFADVTVTGSVNTNETGTNTITYSYDGVSQTITVTVVENKEGISAHDSTIYAGE 1567 Query: 280 GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 + ++ N + N ++ D +++ V+ A Sbjct: 1568 SWN-----------AKDNFDSAFDKDGNAVDLEDVTVTEKPTVDTTKA 1604 >gi|229189836|ref|ZP_04316847.1| Flagellar hook-associated protein 3 [Bacillus cereus ATCC 10876] gi|228593644|gb|EEK51452.1| Flagellar hook-associated protein 3 [Bacillus cereus ATCC 10876] Length = 287 Score = 40.1 bits (92), Expect = 0.57, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 52/152 (34%), Gaps = 8/152 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQ----SSDYGLQLGARVTSILEWEQEKNH 61 +ST +LN ++ +G+ S+ L + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + S +++T+ +T Q L S+ + Q V L G + + Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQAL----NGTNSEKELQAIGAEIDQIL 118 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 + V AN ++G+Y+F G ++ + P T Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKPPFTEDGT 150 >gi|226223460|ref|YP_002757567.1| hypothetical protein Lm4b_00858 [Listeria monocytogenes Clip81459] gi|225875922|emb|CAS04626.1| unnamed protein product [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 2030 Score = 40.1 bits (92), Expect = 0.57, Method: Composition-based stats. Identities = 33/288 (11%), Positives = 78/288 (27%), Gaps = 25/288 (8%) Query: 50 TSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIV----QDMVGPLVILLEGKT 105 L + + NS RL + Q + + I Q V PL + + Sbjct: 1346 AQALTLAKTAAFEEVKDGVNSSAEDRLDSVQVSQTQLDAIKNGSNQGSVYPLTYSITKDS 1405 Query: 106 DNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKP----LNGYFTKDSLAKKS 161 I + +D + + G + N D S Sbjct: 1406 KTVSVTIQVTVAKD-LTAVNAHDSTIYIGDAWEAKDNFDSATNKEGATDIAFSDVTVTGS 1464 Query: 162 FDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA--NNWSNASD 219 + + G + + V + + + + + W +N+ +A D Sbjct: 1465 VNTAVAGVYPVTYTYNGVSKKINV---TVKAIKTAVNAHDSTIYTGDTWNARDNFDSALD 1521 Query: 220 HNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQ 279 + + S N N G I + ++ ++ + + + + Sbjct: 1522 KDGNSVAFADVTVTGSVNTNETGTNTITYSYDGVSQTITVTVVENKEGISAHDSTIYAGE 1581 Query: 280 GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 + ++ N + N ++ D +++ V+ A Sbjct: 1582 SWN-----------AKDNFDSAFDKDGNAVDLEDVTVTEKPTVDTTKA 1618 >gi|46907073|ref|YP_013462.1| cell wall surface anchor family protein [Listeria monocytogenes serotype 4b str. F2365] gi|46880340|gb|AAT03639.1| cell wall surface anchor family protein [Listeria monocytogenes serotype 4b str. F2365] Length = 2027 Score = 40.1 bits (92), Expect = 0.57, Method: Composition-based stats. Identities = 33/288 (11%), Positives = 78/288 (27%), Gaps = 25/288 (8%) Query: 50 TSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIV----QDMVGPLVILLEGKT 105 L + + NS RL + Q + + I Q V PL + + Sbjct: 1346 AQALTLAKTAAFEEVKDGVNSSAEDRLDSVQVSQTQLDAIKNGSNQGSVYPLTYSITKDS 1405 Query: 106 DNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKP----LNGYFTKDSLAKKS 161 I + +D + + G + N D S Sbjct: 1406 KTVSVTIQVTVAKD-LTAVNAHDSTIYIGDAWEAKDNFDSATNKEGATDIAFSDVTVTGS 1464 Query: 162 FDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA--NNWSNASD 219 + + G + + V + + + + + W +N+ +A D Sbjct: 1465 VNTAVAGVYPVTYTYNGVSKKINV---TVKAIKTAVNAHDSTIYTGDTWNARDNFDSALD 1521 Query: 220 HNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQ 279 + + S N N G I + ++ ++ + + + + Sbjct: 1522 KDGNSVAFADVTVTGSVNTNETGTNTITYSYDGVSQTITVTVVENKEGISAHDSTIYAGE 1581 Query: 280 GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 + ++ N + N ++ D +++ V+ A Sbjct: 1582 SWN-----------AKDNFDSAFDKDGNAVDLEDVTVTEKPTVDTTKA 1618 >gi|47092049|ref|ZP_00229842.1| cell wall surface anchor family protein [Listeria monocytogenes str. 4b H7858] gi|47019489|gb|EAL10229.1| cell wall surface anchor family protein [Listeria monocytogenes str. 4b H7858] Length = 2027 Score = 40.1 bits (92), Expect = 0.58, Method: Composition-based stats. Identities = 33/288 (11%), Positives = 78/288 (27%), Gaps = 25/288 (8%) Query: 50 TSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIV----QDMVGPLVILLEGKT 105 L + + NS RL + Q + + I Q V PL + + Sbjct: 1346 AQALTLAKTAAFEEVKDGVNSSAEDRLDSVQVSQTQLDAIKNGSNQGSVYPLTYSITKDS 1405 Query: 106 DNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKP----LNGYFTKDSLAKKS 161 I + +D + + G + N D S Sbjct: 1406 KTVSVTIQVTVAKD-LTAVNAHDSTIYIGDAWEAKDNFDSATNKEGATDIAFSDVTVTGS 1464 Query: 162 FDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA--NNWSNASD 219 + + G + + V + + + + + W +N+ +A D Sbjct: 1465 VNTAVAGVYPVTYTYNGVSKKINV---TVKAIKTAVNAHDSTIYTGDTWNARDNFDSALD 1521 Query: 220 HNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQ 279 + + S N N G I + ++ ++ + + + + Sbjct: 1522 KDGNSVAFADVTVTGSVNTNETGTNTITYSYDGVSQTITVTVVENKEGISAHDSTIYAGE 1581 Query: 280 GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 + ++ N + N ++ D +++ V+ A Sbjct: 1582 SWN-----------AKDNFDSAFDKDGNAVDLEDVTVTEKPTVDTTKA 1618 >gi|306813296|ref|ZP_07447489.1| flagellar hook-associated protein FlgL [Escherichia coli NC101] gi|305854059|gb|EFM54498.1| flagellar hook-associated protein FlgL [Escherichia coli NC101] Length = 309 Score = 40.1 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 99/349 (28%), Gaps = 47/349 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ + E+M TG+ T I + ++++ I + Sbjct: 3 VTTQQTYVSMTQSFNNLSGSLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + ES V Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ + NS Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYS------YQGNSDHRQTTVSNG 176 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V +DF D + + N +++ Sbjct: 177 VEVDTNVAASDFFGSNLDVLNTLNSLSQELQNPDVDPADPQVQSD--------------- 221 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + V + A LG ++ ++ Sbjct: 222 -------------------------IQNAVDVVDTASDDLNASIASLGETQNTMSMLSDA 256 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 257 QTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 305 >gi|218249249|ref|YP_002374710.1| flagellar hook-associated protein 3 [Borrelia burgdorferi ZS7] gi|218164437|gb|ACK74498.1| flagellar hook-associated protein 3 [Borrelia burgdorferi ZS7] Length = 424 Score = 40.1 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 42/99 (42%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 L + ++ + L+ + + L ++ A LG E ++ + + + + + Sbjct: 325 DTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKEAADMKEDMIQ 384 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A L+ ++S I+ K+ + ++L+++ Sbjct: 385 YTDLDVTKAITNLNMASLAYQVSIGISAKIMQTTLLDFI 423 >gi|308802796|ref|XP_003078711.1| kinesin K39, putative (ISS) [Ostreococcus tauri] gi|116057164|emb|CAL51591.1| kinesin K39, putative (ISS) [Ostreococcus tauri] Length = 1163 Score = 40.1 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 41/370 (11%), Positives = 119/370 (32%), Gaps = 31/370 (8%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSS------DYGLQLGARVTSILEWEQEKN 60 S+ + + + + + E+ + ++ G A T + + E Sbjct: 336 SSGAATQALETQLASMQSELQATQLELESKSAALEQAQSSSGAATQALETQLASMQSELQ 395 Query: 61 HIAERLHSNSLV-----TKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAG 115 L S S + + +QA + + + ++ + L + ++G Sbjct: 396 ATQLELESKSAALEQAQSSSGAATQALETQLASMQSELQATQLELESKSAALEQAQSSSG 455 Query: 116 MLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSK 175 + E+ + + L + S L + A ++ + L E Sbjct: 456 AATQALETQLASMQSELQATQL--ELESKSAALEQAQSSSGAATQALETQLASMQSELQA 513 Query: 176 SLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVS 235 + L + + +Q + A+ ++ + E S Sbjct: 514 TQLELESKSAAL---EQAQSSSGAATQALETQLASMQSELQATQLELESKSAALEQAQSS 570 Query: 236 ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGL----SGIIEQRAVL 291 + + + +A + +E + L +++ ++ S+ + + ++ L Sbjct: 571 SGAATQALET--QLASMQSELQATQLELESKSAALEQAQSSSGAATQALETQLASMQSEL 628 Query: 292 GISEKNINEERVFL-QNKNNIIDTYISKSIGVEQH--------TAHAQLSTLINKIEMSY 342 ++ + + L Q +++++ S +E+H A +L L +++ + Sbjct: 629 QATQLELESKSAALEQAQSSLVQARSSSGTAIEEHSITLETLSEAEVRLGQLQTELDEAN 688 Query: 343 MITTKLQKLS 352 T+ L+ +S Sbjct: 689 ATTSALRGVS 698 >gi|225548520|ref|ZP_03769568.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 94a] gi|225370783|gb|EEH00218.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 94a] Length = 424 Score = 40.1 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 42/99 (42%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 L + ++ + L+ + + L ++ A LG E ++ + + + + + Sbjct: 325 DTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKEAADMKEDMIQ 384 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A L+ ++S I+ K+ + ++L+++ Sbjct: 385 YTDLDVTKAITNLNMASLAYQVSIGISAKIMQTTLLDFI 423 >gi|91792671|ref|YP_562322.1| flagellar hook-associated protein FlgL [Shewanella denitrificans OS217] gi|91714673|gb|ABE54599.1| flagellin-like protein [Shewanella denitrificans OS217] Length = 400 Score = 40.1 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 60/152 (39%), Gaps = 7/152 (4%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSIL---EWEQEKNHI 62 IST +F++ + K +++ +G+ + G + + Q+ + Sbjct: 3 ISTGQMFQQNTKSILNNQSAANKTLQQLASGKRVN---TAGDDPVASIAIDNLSQKNVQV 59 Query: 63 AERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYE 122 ++ + + LS +++ L S ++ M G + + G I A ++ + + Sbjct: 60 SQYIKNIDYAKNHLSIAESKLGSADSLMTTMRGQFLQGINGSLTAADRQIIADEMKSNLK 119 Query: 123 SFVTFANMTD-EGQYLFSGINSSEKPLNGYFT 153 + AN D G YLFSG + KP + Sbjct: 120 ELLAIANSQDESGNYLFSGFKINSKPFAFDTS 151 >gi|297244608|ref|ZP_06928491.1| extracellular matrix-binding protein ebh [Staphylococcus aureus A8796] gi|297178638|gb|EFH37884.1| extracellular matrix-binding protein ebh [Staphylococcus aureus A8796] Length = 10624 Score = 39.7 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 110/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++S++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNSVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GTNKDKQAVEQAIQSVTSTENALNGDANLQCAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ L A + Q +D + A + +NA D +K I D + I Sbjct: 6513 TQAIDNLTQLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIGDHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V + + Sbjct: 6572 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETSLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|282927961|ref|ZP_06335570.1| extracellular matrix-binding protein ebh [Staphylococcus aureus A10102] gi|282590258|gb|EFB95338.1| extracellular matrix-binding protein ebh [Staphylococcus aureus A10102] gi|312829827|emb|CBX34669.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ECT-R 2] Length = 10624 Score = 39.7 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 110/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++S++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNSVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GTNKDKQAVEQAIQSVTSTENALNGDANLQCAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ L A + Q +D + A + +NA D +K I D + I Sbjct: 6513 TQAIDNLTQLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIGDHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V + + Sbjct: 6572 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETSLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|258447397|ref|ZP_05695541.1| cell wall associated fibronectin-binding protein [Staphylococcus aureus A6300] gi|257853588|gb|EEV76547.1| cell wall associated fibronectin-binding protein [Staphylococcus aureus A6300] Length = 10598 Score = 39.7 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 110/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6310 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6369 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++S++ QD+ G + L + ++ + + Sbjct: 6370 LNNAQKQDLTSQIEGATTVNGVNSVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 6429 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6430 TKKTAFDNAITQAESYLNKDH---GTNKDKQAVEQAIQSVTSTENALNGDANLQCAKTEA 6486 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ L A + Q +D + A + +NA D +K I D + I Sbjct: 6487 TQAIDNLTQLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIGDHDTIV 6545 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V + + Sbjct: 6546 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETSLNG-DTN 6604 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6605 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6664 Query: 343 M 343 Sbjct: 6665 A 6665 >gi|148267922|ref|YP_001246865.1| hypothetical protein SaurJH9_1495 [Staphylococcus aureus subsp. aureus JH9] gi|150393985|ref|YP_001316660.1| hypothetical protein SaurJH1_1524 [Staphylococcus aureus subsp. aureus JH1] gi|258420574|ref|ZP_05683516.1| cell surface protein [Staphylococcus aureus A9719] gi|205716444|sp|A6U1Q5|EBH_STAA2 RecName: Full=Extracellular matrix-binding protein ebh; AltName: Full=ECM-binding protein homolog; Flags: Precursor gi|205716445|sp|A5ISW6|EBH_STAA9 RecName: Full=Extracellular matrix-binding protein ebh; AltName: Full=ECM-binding protein homolog; Flags: Precursor gi|147740991|gb|ABQ49289.1| protein of unknown function DUF1542 [Staphylococcus aureus subsp. aureus JH9] gi|149946437|gb|ABR52373.1| protein of unknown function DUF1542 [Staphylococcus aureus subsp. aureus JH1] gi|257843522|gb|EEV67929.1| cell surface protein [Staphylococcus aureus A9719] gi|315129147|gb|EFT85142.1| hypothetical protein CGSSa03_06886 [Staphylococcus aureus subsp. aureus CGS03] Length = 10624 Score = 39.7 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 110/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++S++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNSVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GTNKDKQAVEQAIQSVTSTENALNGDANLQCAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ L A + Q +D + A + +NA D +K I D + I Sbjct: 6513 TQAIDNLTQLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIGDHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V + + Sbjct: 6572 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETSLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|255520214|ref|ZP_05387451.1| hypothetical protein LmonocFSL_03112 [Listeria monocytogenes FSL J1-175] Length = 2033 Score = 39.7 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 33/288 (11%), Positives = 78/288 (27%), Gaps = 25/288 (8%) Query: 50 TSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIV----QDMVGPLVILLEGKT 105 L + + NS RL + Q + + I Q V PL + + Sbjct: 1346 AQALTLAKTAAFEEVKDGVNSSAEDRLDSVQVSQTQLDAIKNGSNQGSVYPLTYSITKDS 1405 Query: 106 DNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKP----LNGYFTKDSLAKKS 161 I + +D + + G + N D S Sbjct: 1406 KTVSVTIQVTVAKD-LTAVNAHDSTIYIGDAWEAKDNFDSATNKEGATDIAFSDVTVTGS 1464 Query: 162 FDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA--NNWSNASD 219 + + G + + V + + + + + W +N+ +A D Sbjct: 1465 VNTAVAGVYPVTYTYNGVSKKINV---TVKAIKTAVNAHDSTIYTGDTWNARDNFDSALD 1521 Query: 220 HNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQ 279 + + S N N G I + ++ ++ + + + + Sbjct: 1522 KDGNSVAFADVTVTGSVNTNETGTNTITYSYDGVSQTITVTVVENKEGISAHDSTIYAGE 1581 Query: 280 GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 + ++ N + N ++ D +++ V+ A Sbjct: 1582 SWN-----------AKDNFDSAFDKDGNAVDLEDVTVTEKPTVDTTKA 1618 >gi|149916042|ref|ZP_01904565.1| Animal haem peroxidase [Roseobacter sp. AzwK-3b] gi|149810116|gb|EDM69964.1| Animal haem peroxidase [Roseobacter sp. AzwK-3b] Length = 2197 Score = 39.7 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 93/298 (31%), Gaps = 28/298 (9%) Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 T QA L++ +IVQ + + + L+ + ++ +G Sbjct: 138 TGQAMLTTANEIVQAYQRVIDAQAAAGNVDQALELQRQELQTALDTATAEL-TAAQGD-- 194 Query: 138 FSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQ--QMTD 195 + + N + A+ + D + + +A + +++ A Q Sbjct: 195 ---VAAKTTAKNEADQAVTQAQDTLDNAAATMVTLQGQGQVAEMQVALNAAVAAHTQAEA 251 Query: 196 FIKQLEDKFSDDEYWAN---NWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVI 252 +K +D+ E A NA + D G+ A + Sbjct: 252 DLKAAQDELLQAESAAASMLTMHNAKQTTVTNLQGQKATADQEL-ATAEGLLSDARAA-L 309 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQN---KN 309 E + A+ + + + V + + E A L +E ++ + LQ Sbjct: 310 ALETDAAGAVTEAQTAV-ENATTAVSNAQTRVNELDAQLTQAEADLADLNTQLQAAEQTR 368 Query: 310 NIIDTYI------SKSIGVEQHTAHAQLST-----LINKIEMSYMITTKLQKLSILNY 356 + T + + + ++ A A T + EM +T + S+ ++ Sbjct: 369 DAAQTRVTAAQEAAAATQADREDAQALFDTEVSELATAQAEMLSALTNYITGGSLADF 426 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 33/346 (9%), Positives = 103/346 (29%), Gaps = 17/346 (4%) Query: 11 IFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQ-----LGARVTSILEWEQEKNHIAER 65 + ++ T EL + + +D + L +++ + + + Sbjct: 177 LQTALDTATAELTAAQGDVAAKTTAKNEADQAVTQAQDTLDNAAATMVTLQGQGQVAEMQ 236 Query: 66 LHSNSLVTKR------LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 + N+ V L +Q L + M+ T+ A Sbjct: 237 VALNAAVAAHTQAEADLKAAQDELLQAESAAASMLTMHNAKQTTVTNLQGQKATADQELA 296 Query: 120 SYESFVTFANMTDEGQYLFSGINS-SEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLL 178 + E ++ A + +G + ++ + T S A+ +++ + + Sbjct: 297 TAEGLLSDARAALALETDAAGAVTEAQTAVENATTAVSNAQTRVNELDAQLTQAEADLAD 356 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 L+ + + ++ + + + D + + + +SA Sbjct: 357 LNTQLQAAEQTRDAAQTRVTAAQEAAAATQADREDAQALFDTEV-SELATAQAEMLSALT 415 Query: 239 NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 N + +V + + A + + +I++ A L ++ + Sbjct: 416 NYITGGSLADFSVASAAYSAAREEKLAAETALNDAIDADDEADQAVIDETAALTTAQSRV 475 Query: 299 NEERVFLQ---NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 + + + T + ++ G+ +A L+ ++ + Sbjct: 476 STLTTQRDNDMTTRDGLSTQLDEANGL-LTSAQNTLTAAEQTLQTA 520 >gi|295110994|emb|CBL27744.1| Flagellin and related hook-associated proteins [Synergistetes bacterium SGP1] Length = 912 Score = 39.7 bits (91), Expect = 0.65, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 45/133 (33%), Gaps = 11/133 (8%) Query: 219 DHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQ 278 D+ ++I EG D+ N+ + AV+ T+ S + ++ + Sbjct: 782 DNTTVFQIGANEGEDMGINIGDMRAHALGLNAVLVTDRES-----------AARSITIID 830 Query: 279 QGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKI 338 + + QRA LG + + L + + S+ + + L + Sbjct: 831 NAIDKVSTQRAKLGAYQNRLEHTINNLNTAAENLTSAESRIRDTDMAKEMMNFTKLQIML 890 Query: 339 EMSYMITTKLQKL 351 + + + +L Sbjct: 891 QAGTSMLAQANQL 903 >gi|254823890|ref|ZP_05228891.1| cell wall surface anchor family protein [Listeria monocytogenes FSL J1-194] gi|293593115|gb|EFG00876.1| cell wall surface anchor family protein [Listeria monocytogenes FSL J1-194] Length = 2033 Score = 39.7 bits (91), Expect = 0.65, Method: Composition-based stats. Identities = 33/288 (11%), Positives = 78/288 (27%), Gaps = 25/288 (8%) Query: 50 TSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIV----QDMVGPLVILLEGKT 105 L + + NS RL + Q + + I Q V PL + + Sbjct: 1346 AQALTLAKTAAFEEVKDGVNSSAEDRLDSVQVSQTQLDAIKNGSNQGSVYPLTYSITKDS 1405 Query: 106 DNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKP----LNGYFTKDSLAKKS 161 I + +D + + G + N D S Sbjct: 1406 KTVSVTIQVTVAKD-LTAVNAHDSTIYIGDAWEAKDNFDSATNKEGATDIAFSDVTVTGS 1464 Query: 162 FDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA--NNWSNASD 219 + + G + + V + + + + + W +N+ +A D Sbjct: 1465 VNTAVAGVYPVTYTYNGVSKKINV---TVKAIKTAVNAHDSTIYTGDTWNARDNFDSALD 1521 Query: 220 HNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQ 279 + + S N N G I + ++ ++ + + + + Sbjct: 1522 KDGNSVAFADVTVTGSVNTNETGTNTITYSYDGVSQTITVTVVENKEGISAHDSTIYAGE 1581 Query: 280 GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 + ++ N + N ++ D +++ V+ A Sbjct: 1582 SWN-----------AKDNFDSAFDKDGNAVDLEDVTVTEKPTVDTTKA 1618 >gi|238916200|ref|YP_002929717.1| flagellar hook-associated protein 3 FlgL [Eubacterium eligens ATCC 27750] gi|238871560|gb|ACR71270.1| flagellar hook-associated protein 3 FlgL [Eubacterium eligens ATCC 27750] Length = 518 Score = 39.7 bits (91), Expect = 0.65, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 51/141 (36%), Gaps = 9/141 (6%) Query: 221 NIKYRIKDTEGIDV----SANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLST 276 +I +I E + S + + ++ IM +F + A +M Sbjct: 382 DIDAQISKVESMQKDSQYSDDASQEKLKTIMEGLTKQRDFAKSEM-KNAFEAGIGQMQGY 440 Query: 277 VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLIN 336 + Q + +A +G + ++ + L + S++ ++ ++ Sbjct: 441 MDQ----VSNAKADVGNRQIRLDLTKTRLTEQKTNFTDLKSQNEDIDLEEIVVTYTSAEL 496 Query: 337 KIEMSYMITTKLQKLSILNYL 357 + + +K+ + S+L++L Sbjct: 497 VYQAALSAASKVVQQSLLDFL 517 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 32/248 (12%), Positives = 72/248 (29%), Gaps = 17/248 (6%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + + L E+ T + L + + + Sbjct: 3 ITNQMMINSSISNIQVNKNQINTLSTELSTQKKISKPSDDPIIAIRALRLRSSLDEVTQY 62 Query: 66 LHSN-SLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 L N + LS + L I++D+ V ++ A L E++ Sbjct: 63 LGKNIPDASSWLSVTHDALDESNSIIKDLYKYCVQGSTDSYSESERNTLAESLNKLVEAY 122 Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAK-------------KSFDQMLQGFLE 171 N+ G+Y+F+G + +PL D+ + + Sbjct: 123 YEQGNVDYAGRYVFTGHATD-RPLTYQSDADAKNVDYSITQNFTREDLSTKTAYTNAYSN 181 Query: 172 ENSKSLLAGQHLEVSSMNAQ-QMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTE 230 ++ +L + + Q + I+ D+ + + N + N+ T Sbjct: 182 DDILNLTVKTDANGNIITPNIQSVNRIQLAYDEINGGT-FTLGMGNNNSANVTINADGTV 240 Query: 231 GIDVSANV 238 ++ S Sbjct: 241 TMNGSLTA 248 >gi|86157769|ref|YP_464554.1| flagellar hook-associated protein FlgL [Anaeromyxobacter dehalogenans 2CP-C] gi|85774280|gb|ABC81117.1| flagellar hook-associated protein FlgL [Anaeromyxobacter dehalogenans 2CP-C] Length = 294 Score = 39.7 bits (91), Expect = 0.65, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 25/105 (23%) Query: 56 EQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAG 115 + + + L+ A L + + D + A Sbjct: 53 RVTVARMDAIATATGRASDELAAVDAALGEVATGLARAQELATRYASAPYDAAQRASGAR 112 Query: 116 MLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKK 160 +R S V + G+YL G P + A Sbjct: 113 EVRGILASAVASLGVKVGGRYLLGGFRDGAPPFDAGGAYQGDAGV 157 >gi|329727598|gb|EGG64054.1| putative methyl-coenzyme M reductase, alpha subunit [Staphylococcus aureus subsp. aureus 21172] Length = 10547 Score = 39.7 bits (91), Expect = 0.66, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 110/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++S++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNSVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GTNKDKQAVEQAIQSVTSTENALNGDANLQCAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ L A + Q +D + A + +NA D +K I D + I Sbjct: 6513 TQAIDNLTQLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIGDHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V + + Sbjct: 6572 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETSLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|328467116|gb|EGF38206.1| hypothetical protein LM1816_05083 [Listeria monocytogenes 1816] Length = 1971 Score = 39.7 bits (91), Expect = 0.66, Method: Composition-based stats. Identities = 33/288 (11%), Positives = 78/288 (27%), Gaps = 25/288 (8%) Query: 50 TSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIV----QDMVGPLVILLEGKT 105 L + + NS RL + Q + + I Q V PL + + Sbjct: 1346 AQALTLAKTAAFEEVKDGVNSSAEDRLDSVQVSQTQLDAIKNGSNQGSVYPLTYSITKDS 1405 Query: 106 DNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKP----LNGYFTKDSLAKKS 161 I + +D + + G + N D S Sbjct: 1406 KTVSVTIQVTVAKD-LTAVNAHDSTIYIGDAWEAKDNFDSATNKEGATDIAFSDVTVTGS 1464 Query: 162 FDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA--NNWSNASD 219 + + G + + V + + + + + W +N+ +A D Sbjct: 1465 VNTAVAGVYPVTYTYNGVSKKINV---TVKAIKTAVNAHDSTIYTGDTWNARDNFDSALD 1521 Query: 220 HNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQ 279 + + S N N G I + ++ ++ + + + + Sbjct: 1522 KDGNSVAFADVTVTGSVNTNETGTNTITYSYDGVSQTITVTVVENKEGISAHDSTIYAGE 1581 Query: 280 GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 + ++ N + N ++ D +++ V+ A Sbjct: 1582 SWN-----------AKDNFDSAFDKDGNAVDLEDVTVTEKPTVDTTKA 1618 >gi|224532856|ref|ZP_03673471.1| flagellar hook-associated protein 3 [Borrelia burgdorferi WI91-23] gi|224512245|gb|EEF82631.1| flagellar hook-associated protein 3 [Borrelia burgdorferi WI91-23] Length = 424 Score = 39.7 bits (91), Expect = 0.66, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 42/99 (42%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 L + ++ + L+ + + L ++ A LG E ++ + + + + + Sbjct: 325 DTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKEAADMKEDMIQ 384 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A L+ ++S I+ K+ + ++L+++ Sbjct: 385 YTDLDVTKAITNLNMASLAYQVSIGISAKIMQTTLLDFI 423 >gi|216264188|ref|ZP_03436180.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 156a] gi|224534091|ref|ZP_03674674.1| flagellar hook-associated protein 3 [Borrelia burgdorferi CA-11.2a] gi|225549797|ref|ZP_03770761.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 118a] gi|215980661|gb|EEC21468.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 156a] gi|224512790|gb|EEF83158.1| flagellar hook-associated protein 3 [Borrelia burgdorferi CA-11.2a] gi|225369605|gb|EEG99054.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 118a] gi|312149722|gb|ADQ29793.1| flagellar hook-associated protein 3 [Borrelia burgdorferi N40] Length = 424 Score = 39.7 bits (91), Expect = 0.66, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 42/99 (42%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 L + ++ + L+ + + L ++ A LG E ++ + + + + + Sbjct: 325 DTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKEAADMKEDMIQ 384 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A L+ ++S I+ K+ + ++L+++ Sbjct: 385 YTDLDVTKAITNLNMASLAYQVSIGISAKIMQTTLLDFI 423 >gi|15594527|ref|NP_212316.1| flagellar hook-associated protein FlgL [Borrelia burgdorferi B31] gi|221217535|ref|ZP_03589005.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 72a] gi|226321500|ref|ZP_03797026.1| flagellar hook-associated protein 3 [Borrelia burgdorferi Bol26] gi|2688081|gb|AAC66578.1| flagellar hook-associated protein 3 (flgL) [Borrelia burgdorferi B31] gi|221192598|gb|EEE18815.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 72a] gi|226232689|gb|EEH31442.1| flagellar hook-associated protein 3 [Borrelia burgdorferi Bol26] gi|312148539|gb|ADQ31198.1| flagellar hook-associated protein 3 [Borrelia burgdorferi JD1] Length = 424 Score = 39.7 bits (91), Expect = 0.66, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 42/99 (42%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 L + ++ + L+ + + L ++ A LG E ++ + + + + + Sbjct: 325 DTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKEAADMKEDMIQ 384 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A L+ ++S I+ K+ + ++L+++ Sbjct: 385 YTDLDVTKAITNLNMASLAYQVSIGISAKIMQTTLLDFI 423 >gi|323158096|gb|EFZ44195.1| flagellar hook-associated protein 3 [Escherichia coli EPECa14] Length = 298 Score = 39.7 bits (91), Expect = 0.67, Method: Composition-based stats. Identities = 44/340 (12%), Positives = 97/340 (28%), Gaps = 47/340 (13%) Query: 15 MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 M L+ D + E+M TG+ T I + ++++ I + + + Sbjct: 1 MTQSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQYQSNIDSASA 60 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-E 133 LS ++ L + + + L+ G + + ES V N D + Sbjct: 61 GLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMVAALNYQDED 120 Query: 134 GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQM 193 G Y+F G + + P+ S+ + NS V Sbjct: 121 GHYVFGGTINDQPPIVAVDDDGDGVTDSYS------YQGNSDHRQTTVSNGVEVDTNVAA 174 Query: 194 TDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIG 253 +DF D + + N +++ Sbjct: 175 SDFFGSNLDVLNTLNSLSQELQNPDVDPADPQVQSD------------------------ 210 Query: 254 TEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 + + V + A LG ++ ++ + + D Sbjct: 211 ----------------IQNAVDVVDTASDDLNASIASLGETQNTMSMLSDAQTDISTSND 254 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 I ++ A + L +E++ +K+ +L++ Sbjct: 255 ELIGSLQDLDYGPASITFTGLEVAMEVTLKTYSKVSELNL 294 >gi|223889254|ref|ZP_03623842.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 64b] gi|223885287|gb|EEF56389.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 64b] Length = 424 Score = 39.7 bits (91), Expect = 0.69, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 43/99 (43%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 L + ++ + L+ + + L ++ A LG E ++ + + + + + + Sbjct: 325 DTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKEASDMKEDMIQ 384 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A L+ ++S I+ K+ + ++L+++ Sbjct: 385 YTDLDVTKAITNLNMASLAYQVSIGISAKIMQTTLLDFI 423 >gi|195941913|ref|ZP_03087295.1| flagellar hook-associated protein FlgL [Borrelia burgdorferi 80a] Length = 424 Score = 39.7 bits (91), Expect = 0.69, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 42/99 (42%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 L + ++ + L+ + + L ++ A LG E ++ + + + + + Sbjct: 325 DTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKEAADMKEDMIQ 384 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A L+ ++S I+ K+ + ++L+++ Sbjct: 385 YTDLDVTKAITNLNMASLAYQVSIGISAKIMQTTLLDFI 423 >gi|227820865|ref|YP_002824835.1| flagellin C protein [Sinorhizobium fredii NGR234] gi|227339864|gb|ACP24082.1| flagellin C protein [Sinorhizobium fredii NGR234] Length = 302 Score = 39.7 bits (91), Expect = 0.69, Method: Composition-based stats. Identities = 43/351 (12%), Positives = 97/351 (27%), Gaps = 62/351 (17%) Query: 5 GISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAE 64 I T+S + ++ + TG A + + ++ Sbjct: 3 SILTNSSATAALQTLRSISSSMEDTQNRISTGMRVGSASDNAAYWSIATTMRSDNAALSS 62 Query: 65 RLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + + ++ T+ A + + +V+++ +V E D K L+D S Sbjct: 63 VTDALGMGAAKVDTAYAGMEAAIDVVKEIKAKIVAATEEGVDGAKVQEEIDQLQDQLLSI 122 Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 A + G+ +G F + G + + S + Sbjct: 123 AESA--SFNGENWIAG-----------EAATKTVVTGFVRASDGTVSIKTSSYTLTDAAD 169 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + + A + N N Sbjct: 170 GTLLFADDGAGGLDTATGILG---------------------------TAGTNGND---- 198 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + A + LS V+ L+ + + LG I+ + F Sbjct: 199 --------VYGLDISAMDATA----LGEALSDVEDALTAMTSAASSLGSMSTRIDLQADF 246 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + ++ I+ I + + + + +L L + +++ +Q LSI N Sbjct: 247 VSELSDSIENGIGRLVDADMNEESTRLKALQTQQQLA------IQALSIAN 291 >gi|240137251|ref|YP_002961720.1| putative flagellin (flaA-like; flaB-like) [Methylobacterium extorquens AM1] gi|240007217|gb|ACS38443.1| putative flagellin (flaA-like; flaB-like) [Methylobacterium extorquens AM1] Length = 452 Score = 39.7 bits (91), Expect = 0.70, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 41/116 (35%), Gaps = 6/116 (5%) Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 + A +F L + +++ V + ++ + + LG S+ I+ Sbjct: 332 SQAGSYTAGGAYSIADFDISTLVGTNGDADLSAIITAVDKAIAKVTDAGTKLGASKTQID 391 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + F+ + I + + +L L + +++ +Q LSI N Sbjct: 392 GQSSFVDTLMKANNRTIGTLVDADIEEESTKLKALQTQQQLA------VQALSIAN 441 >gi|148266108|ref|YP_001232814.1| flagellar hook-associated protein 3 [Geobacter uraniireducens Rf4] gi|146399608|gb|ABQ28241.1| flagellar hook-associated protein 3 [Geobacter uraniireducens Rf4] Length = 298 Score = 39.7 bits (91), Expect = 0.70, Method: Composition-based stats. Identities = 32/282 (11%), Positives = 78/282 (27%), Gaps = 57/282 (20%) Query: 76 LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQ 135 L+ + + ++ M ++ V + + + L+ +T N G+ Sbjct: 73 LTMADSAMAGMGDVLSRAKELAVAMSSDTNNADSRTAAVNELQQLKGQIITLGNTQLNGK 132 Query: 136 YLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTD 195 Y+F G + P F + D + + V+ Sbjct: 133 YIFGGFKNDTPP----FDAAGNFTGTNDDINIEIERGTFLPVNYAGDKLVNGGTPA---- 184 Query: 196 FIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTE 255 S+ +D IK + + + N Sbjct: 185 ------------------GSSGTDI-----IKIFDNLVTALNAGST-------------- 207 Query: 256 FLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTY 315 + L + +S ++ R+ +G ++ N + Sbjct: 208 ------------SAVQAELPNLDSAMSQVLAARSDVGARMNRLDGSSQVNDNTKLSLTKI 255 Query: 316 ISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 +S V+ + LS + + + K+ ++++L+YL Sbjct: 256 LSNIQDVDYMQVISDLSKQQTAYQAAIAASAKISQVTLLDYL 297 >gi|292489126|ref|YP_003532013.1| flagellar hook-associated protein 3 FlgL [Erwinia amylovora CFBP1430] gi|292900245|ref|YP_003539614.1| flagellar hook-associated protein 3 [Erwinia amylovora ATCC 49946] gi|291200093|emb|CBJ47219.1| flagellar hook-associated protein 3 [Erwinia amylovora ATCC 49946] gi|291554560|emb|CBA22167.1| Flagellar hook-associated protein 3 FlgL [Erwinia amylovora CFBP1430] gi|312173284|emb|CBX81539.1| Flagellar hook-associated protein 3 FlgL [Erwinia amylovora ATCC BAA-2158] Length = 302 Score = 39.7 bits (91), Expect = 0.70, Method: Composition-based stats. Identities = 34/316 (10%), Positives = 86/316 (27%), Gaps = 69/316 (21%) Query: 47 ARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKI-VQDMVGPLVILLEGKT 105 + + + + + V + + LSS+ K+ +++ LV + G Sbjct: 44 GGAADAVIMQNALAKMELYKDARAGVRSGMEQEDSTLSSVGKLLTKNLSEKLVAAMNGTL 103 Query: 106 DNNKFPINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ 164 + + ++ + AN D G+Y+FSG ++ + D + D Sbjct: 104 SEEDRAVLGQEIEGISKNMLDLANTRDGSGRYIFSGFKTATAAFD-----DQGNYQGGDT 158 Query: 165 MLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY 224 + + + M + S Sbjct: 159 AIHQTVAD-----------------GSDMQTSHLGSDIFMSGTG---------------- 185 Query: 225 RIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGI 284 +++ +E + + V G+ + Sbjct: 186 ---------------SDLFKNLQEA---VSELTKSPIDEEQLKSALGAASKAVDAGIDRL 227 Query: 285 IEQRAVLGISEKNINEERVFLQNKN-NIIDTYISKSIGVEQHTAHAQLSTLINK------ 337 + +A LG + + L + + + + K Q++ + Sbjct: 228 GKVQADLGTQLQQL----DALDIQADDDFNAMVGKLQSALGADTSTQINLIQRTKMAEVV 283 Query: 338 IEMSYMITTKLQKLSI 353 +E S + +QK+S+ Sbjct: 284 MEASMKVFQSMQKMSL 299 >gi|167769546|ref|ZP_02441599.1| hypothetical protein ANACOL_00880 [Anaerotruncus colihominis DSM 17241] gi|167668514|gb|EDS12644.1| hypothetical protein ANACOL_00880 [Anaerotruncus colihominis DSM 17241] Length = 390 Score = 39.7 bits (91), Expect = 0.70, Method: Composition-based stats. Identities = 17/176 (9%), Positives = 50/176 (28%), Gaps = 1/176 (0%) Query: 148 LNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDD 207 ++ T K F + +VS + ++ + FS D Sbjct: 179 ISADKTGTVTVKAGGKATGVKFTVTQTGKGFYSVTADVSGVTDDKIKAAWSGVTANFSVD 238 Query: 208 EYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARN 267 + A + ++ + + + + ++ + + Sbjct: 239 GPKDDGTYAAGEQKFTAGKNESMQLQIGDTADSFNQLKVGIGSMSSAALGVDKVDISNQE 298 Query: 268 VLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE 323 K + ++ + + QRA LG ++ + L + + + S+ + Sbjct: 299 G-AAKAIDIIRNAIDRVSSQRASLGATQNRLEYTINNLDTASENLQSANSRIRDTD 353 >gi|292660173|gb|ADE34755.1| spike glycoprotein [Bat SARS coronavirus HKU3-7] Length = 1242 Score = 39.7 bits (91), Expect = 0.71, Method: Composition-based stats. Identities = 16/127 (12%), Positives = 42/127 (33%), Gaps = 5/127 (3%) Query: 229 TEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTD----GARNVLTKKMLSTVQQGLSGI 284 + I F + F +T + ++ + S + + + Sbjct: 848 SGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSL 907 Query: 285 IEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMI 344 + LG + +N+ L + + V + ++L + ++++ +I Sbjct: 908 SSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSV-LNDILSRLDKVEAEVQIDRLI 966 Query: 345 TTKLQKL 351 T +LQ L Sbjct: 967 TGRLQSL 973 >gi|258444769|ref|ZP_05693098.1| cell surface protein [Staphylococcus aureus A8115] gi|282892930|ref|ZP_06301165.1| extracellular matrix-binding protein ebh [Staphylococcus aureus A8117] gi|257850262|gb|EEV74215.1| cell surface protein [Staphylococcus aureus A8115] gi|282764927|gb|EFC05052.1| extracellular matrix-binding protein ebh [Staphylococcus aureus A8117] Length = 10473 Score = 39.7 bits (91), Expect = 0.71, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 110/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++S++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNSVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GTNKDKQAVEQAIQSVTSTENALNGDANLQCAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ L A + Q +D + A + +NA D +K I D + I Sbjct: 6513 TQAIDNLTQLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIGDHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V + + Sbjct: 6572 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETSLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|292660185|gb|ADE34766.1| spike glycoprotein [Bat SARS coronavirus HKU3-8] Length = 1242 Score = 39.7 bits (91), Expect = 0.74, Method: Composition-based stats. Identities = 16/127 (12%), Positives = 42/127 (33%), Gaps = 5/127 (3%) Query: 229 TEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTD----GARNVLTKKMLSTVQQGLSGI 284 + I F + F +T + ++ + S + + + Sbjct: 848 SGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSL 907 Query: 285 IEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMI 344 + LG + +N+ L + + V + ++L + ++++ +I Sbjct: 908 SSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSV-LNDILSRLDKVEAEVQIDRLI 966 Query: 345 TTKLQKL 351 T +LQ L Sbjct: 967 TGRLQSL 973 >gi|291288371|ref|YP_003505187.1| flagellin domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290885531|gb|ADD69231.1| flagellin domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 1284 Score = 39.7 bits (91), Expect = 0.74, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 3/87 (3%) Query: 274 LSTVQQGLSGIIEQRAVLGISEKNINEE---RVFLQNKNNIIDTYISKSIGVEQHTAHAQ 330 + ++ S I ++G E L + + + S ++Q A Sbjct: 1198 MKVMETAESQIHTALTIVGNRENRAESAVTFNESLITASEKLKAEYTGSTTMDQAAAATN 1257 Query: 331 LSTLINKIEMSYMITTKLQKLSILNYL 357 + + + T ++ ++S+L+YL Sbjct: 1258 YTVAQTVYQSALAATAQILQISLLDYL 1284 Score = 37.0 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 35/107 (32%), Gaps = 5/107 (4%) Query: 77 STSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQY 136 S Q S + + ++ V D + AG + + YE + AN +Y Sbjct: 78 SILQTASSILSRAKDEL---AVAGKNDSQDADSRKALAGEVMNIYEELLDLANSKYLDRY 134 Query: 137 LFSGINSSEKPLNGYFTKDSLAKKSFDQ--MLQGFLEENSKSLLAGQ 181 +F G + E P + + S D L + L G Sbjct: 135 IFGGYETEEAPFTSGDRQVTSVVSSMDDGEAFSSRLYSDMPDLAKGS 181 >gi|254423112|ref|ZP_05036830.1| PAS fold family [Synechococcus sp. PCC 7335] gi|196190601|gb|EDX85565.1| PAS fold family [Synechococcus sp. PCC 7335] Length = 566 Score = 39.7 bits (91), Expect = 0.74, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 11/109 (10%) Query: 39 SDYGLQLGARVTSI-LEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPL 97 +D G+Q G T + Q+ +A +N+L+ KRL ++QA L Q + L Sbjct: 107 ADLGIQSGGETTVALVNTLQDMTALACIRENNNLLHKRLESNQAKLRK----AQQLESTL 162 Query: 98 VILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF---SGINS 143 + + ++ +L+ + V N L+ G ++ Sbjct: 163 KRITDRVRESLD---EQQILQTAVNELVEVLNAKAANTALYDLEQGTST 208 >gi|160878465|ref|YP_001557433.1| flagellar hook-associated protein 3 [Clostridium phytofermentans ISDg] gi|160427131|gb|ABX40694.1| flagellar hook-associated protein 3 [Clostridium phytofermentans ISDg] Length = 514 Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 44/147 (29%), Gaps = 2/147 (1%) Query: 1 MKTTG-ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEK 59 M+ + I+ + + K ++ TG+ + L+ Sbjct: 1 MEVSMRITNKMMTNNVLYNINNNKNSLSKTEQQYSTGKKIQRPSEDPIVAVRALKLRTNL 60 Query: 60 NHIAERLHSN-SLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLR 118 + + N + +++ LS++ +I+ + V A L Sbjct: 61 TELNQYYEKNIPDALAWMDLTESSLSNINEILTKIHTYCVNGANDTLTEEDRNSLAVNLN 120 Query: 119 DSYESFVTFANMTDEGQYLFSGINSSE 145 + N G+Y+FSG + Sbjct: 121 QLKDQIYQEGNTNYAGRYVFSGYKTDS 147 Score = 37.4 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 47/137 (34%), Gaps = 2/137 (1%) Query: 221 NIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQG 280 + +I + + S N+ + + T K L D LS +++ Sbjct: 380 AVDKKISEVNKMLASGNITEEQKTTLNQALEVLTA--EKILKDEVMQKTFGSALSGIKEQ 437 Query: 281 LSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEM 340 + I + LG I L + + +SK+ + ++ + + Sbjct: 438 QNIINVAVSDLGSRSVRIQLTESRLSMEQVDFEDLLSKNEDADIVDTIIKMKSQESVYNA 497 Query: 341 SYMITTKLQKLSILNYL 357 S K+ K S+L++L Sbjct: 498 SLSAAAKIVKNSLLDFL 514 >gi|260767930|ref|ZP_05876864.1| flagellar hook-associated protein FlgL [Vibrio furnissii CIP 102972] gi|260615960|gb|EEX41145.1| flagellar hook-associated protein FlgL [Vibrio furnissii CIP 102972] gi|315179633|gb|ADT86547.1| flagellar hook-associated protein L [Vibrio furnissii NCTC 11218] Length = 299 Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 118/355 (33%), Gaps = 65/355 (18%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTG----QSSDYGLQLGARVTSILEWEQEKNH 61 IS + + M + N K+ ++M TG + SD + +L ++E + Sbjct: 3 ISDTQFSQMMLQSLQLNNAGLGKVMQQMSTGDRLTKLSDDPMA----SIKLLNLDREGSA 58 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 I + + + V LS+ + +L S+ + ++ + ++ G + L+ Sbjct: 59 IEQYQANIANVKTTLSSQEVYLDSVNESLKSIRERVLWGANGTMTTDDREGIVTELKSLR 118 Query: 122 ESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 +S + N DE G +LFSG +S L+ + S + Sbjct: 119 DSIASSFNAQDEEGHFLFSGTATSTAALDN----------------------SGGSYVLQ 156 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 + + + A ++ + + +D+ N+ Sbjct: 157 GNSDKRVVTV--------------------------AKGVTMESNMTAQDILDLGGGSNV 190 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 + + + +EF + L+ V L+ ++ +G N++ Sbjct: 191 -----LNTLDALISEFEAPTAN---FRTEVDNTLAAVDSTLNNVLAAMTEIGGRHNNLDL 242 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + +D S ++ A +LS + ++ + K+ LS+ + Sbjct: 243 LDSAHGDNKLFVDKVTSDLSALDYGEASVRLSNYMAALQATQASYVKIDDLSLFD 297 >gi|331645425|ref|ZP_08346529.1| flagellar hook-associated protein 3 [Escherichia coli M605] gi|331045587|gb|EGI17713.1| flagellar hook-associated protein 3 [Escherichia coli M605] Length = 317 Score = 39.3 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 43/349 (12%), Positives = 99/349 (28%), Gaps = 47/349 (13%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 ++T + M L+ + E+M TG+ T I + ++++ I + Sbjct: 11 VTTQQTYVSMTQSFNNLSGSLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 70 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + LS ++ L + + + L+ G + + +S V Sbjct: 71 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTDSMV 130 Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 N D +G Y+F G + + P+ S+ + NS Sbjct: 131 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYS------YQGNSDHRQTTVSNG 184 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 V +DF D + + N +++ Sbjct: 185 VEVDTNVAASDFFGSNLDVLNTLNSLSQELQNPDVDPADPQVQSD--------------- 229 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + V + A LG ++ ++ Sbjct: 230 -------------------------IQNAVDVVDTASDDLNASIASLGETQNTMSMLSDA 264 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + + D I ++ A + L +E + +K+ +L++ Sbjct: 265 QTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKVSELNL 313 >gi|320142680|gb|EFW34483.1| signal peptide, YSIRK family [Staphylococcus aureus subsp. aureus MRSA177] Length = 10498 Score = 39.3 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 +++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6513 IQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 S N + ++ + V +G+ Sbjct: 6572 ASGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|107023945|ref|YP_622272.1| flagellar hook-associated protein FlgL [Burkholderia cenocepacia AU 1054] gi|116691032|ref|YP_836655.1| flagellar hook-associated protein FlgL [Burkholderia cenocepacia HI2424] gi|254246971|ref|ZP_04940292.1| Flagellin [Burkholderia cenocepacia PC184] gi|105894134|gb|ABF77299.1| Flagellar hook-associated protein 3 [Burkholderia cenocepacia AU 1054] gi|116649121|gb|ABK09762.1| flagellar hook-associated protein 3 [Burkholderia cenocepacia HI2424] gi|124871747|gb|EAY63463.1| Flagellin [Burkholderia cenocepacia PC184] Length = 411 Score = 39.3 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 68/185 (36%), Gaps = 3/185 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ ++ + +L++++ +G S ++ +++ Sbjct: 3 ISTAQFYQMNVAQMSDQQAQLSQLYQQISSGVSLATPADNPLGAAQAVQLSMTSATLSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L L S+ ++ + ++ +G ++ + L+ + + Sbjct: 63 ASNQNAALSSLQKEDQTLISVNNLLNSIHTVVIQAGDGSLSDSDRSALSTQLQGYRDQLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 T AN TD G YLF+G S+ P + S D + +++S+ G + Sbjct: 123 TLANSTDGSGNYLFAGFQSATAPFSN--APGGGVTYSGDTGSRQVQIADTRSIAQGDNGA 180 Query: 185 VSSMN 189 ++ Sbjct: 181 NVFLS 185 >gi|269940929|emb|CBI49313.1| very large surface anchored protein [Staphylococcus aureus subsp. aureus TW20] gi|302751265|gb|ADL65442.1| extracellular matrix binding protein [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 10421 Score = 39.3 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 +++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6513 IQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 S N + ++ + V +G+ Sbjct: 6572 ASGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|160896072|ref|YP_001561654.1| flagellar hook-associated protein 3 [Delftia acidovorans SPH-1] gi|160361656|gb|ABX33269.1| flagellar hook-associated protein 3 [Delftia acidovorans SPH-1] Length = 399 Score = 39.3 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 50/398 (12%), Positives = 114/398 (28%), Gaps = 41/398 (10%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M + I T+++++ N V L E+ +G+ + Sbjct: 1 MSISRIGTANMYDSTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERALTRIS 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 L ++ ++ L + Q ++D ++ G D L Sbjct: 61 RSENDQRVLGLQRDVMAQGESKLGTAQDALKDFRDLILQSGNGSYDQKARDALVQQLESL 120 Query: 121 YESFVTFANMTD-EGQYLFSGINSSEKPLNGYF---------TKDSLAKKSFDQMLQGFL 170 +++AN D G +F G+ S E PL + + ++ L GF Sbjct: 121 RNQVLSYANAKDSNGLPIFRGLGSKEDPLVNSTPGANSQLQPGQATGSENGLPLALDGFA 180 Query: 171 E--ENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWS------------- 215 S + D + + N++ Sbjct: 181 TWMNVPTGNGVFAVSRQSPTGSSAYADLGTVSDPSAITGASYTLNFTKDATTGALSYTVT 240 Query: 216 -----------NASD----HNIKYRIKDT-EGIDVSANVNMRGIRDIMFVAVIGTEFLSK 259 A D + +I D + + + + Sbjct: 241 SGGTTGTAVPYTAGDSITVGGMSMKISGNLATGDSFTLAPSQRTDLFSVLDNVIAGVKNG 300 Query: 260 NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKS 319 GA + L+ + G+S + R+ G + ++N+ + + S++ Sbjct: 301 ATDAGAMQQALGRGLNELDAGMSRVQAMRSFAGDQLNRADRLEDDMKNQADQQEAARSRA 360 Query: 320 IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A + + ++ + +QKLS+ N++ Sbjct: 361 EDIDMIKALSDVDMQKVGMQAALQSYASIQKLSLFNFI 398 >gi|329314112|gb|AEB88525.1| Extracellular matrix binding protein [Staphylococcus aureus subsp. aureus T0131] Length = 10421 Score = 39.3 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 +++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6513 IQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 S N + ++ + V +G+ Sbjct: 6572 ASGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|57651379|ref|YP_186319.1| cell wall associated fibronectin-binding protein [Staphylococcus aureus subsp. aureus COL] gi|81694497|sp|Q5HFY8|EBH_STAAC RecName: Full=Extracellular matrix-binding protein ebh; AltName: Full=ECM-binding protein homolog; Flags: Precursor gi|57285565|gb|AAW37659.1| Cell wall associated fibronectin-binding protein [Staphylococcus aureus subsp. aureus COL] Length = 10498 Score = 39.3 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 +++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6513 IQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 S N + ++ + V +G+ Sbjct: 6572 ASGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|315197822|gb|EFU28156.1| extracellular matrix binding protein [Staphylococcus aureus subsp. aureus CGS01] Length = 10421 Score = 39.3 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 +++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6513 IQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 S N + ++ + V +G+ Sbjct: 6572 ASGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|87161956|ref|YP_494024.1| cell surface protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|161509602|ref|YP_001575261.1| extracellular matrix binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|123485939|sp|Q2FH04|EBH_STAA3 RecName: Full=Extracellular matrix-binding protein ebh; AltName: Full=ECM-binding protein homolog; Flags: Precursor gi|205716446|sp|A8Z414|EBH_STAAT RecName: Full=Extracellular matrix-binding protein ebh; AltName: Full=ECM-binding protein homolog; Flags: Precursor gi|87127930|gb|ABD22444.1| cell surface protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|160368411|gb|ABX29382.1| extracellular matrix binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] Length = 10421 Score = 39.3 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 +++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6513 IQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 S N + ++ + V +G+ Sbjct: 6572 ASGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|238785490|ref|ZP_04629473.1| Flagellar hook-associated protein 3 [Yersinia bercovieri ATCC 43970] gi|238713592|gb|EEQ05621.1| Flagellar hook-associated protein 3 [Yersinia bercovieri ATCC 43970] Length = 320 Score = 39.3 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 35/336 (10%), Positives = 100/336 (29%), Gaps = 31/336 (9%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 ++ +++ TG+ + + Q ++ + + S LS Sbjct: 10 VSTAQSLWMQSGQQLSTGKRVVNPSDDPMAASQAVMVSQSQSENNQYTLARSFARNELSQ 69 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFAN-MTDEGQYL 137 L + +Q + ++ ++ A L+ + + AN G+Y Sbjct: 70 ETKTLEQVTSTIQSIQSIIISAKSDVLSDDDRASYATQLQGLKDQLLNQANSTNGSGRYA 129 Query: 138 FSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFI 197 F+ S + P + + D ++ ++ + + V Sbjct: 130 FAAFKSDKPPFV-VSATGEVTYQGGDVAIEQKVDASRSMTIGHTGTSVFMALTSNAK--- 185 Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 + +D + N N D +K + + +++ + Sbjct: 186 PEPDDAAGNPVASEANIFNTIDTVLKS-------LKTPLSGATDAVKEQAQADM------ 232 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 K + + L+ ++ ++ +G + ++ ++ ++ Sbjct: 233 -------------DKGIRGMANSLNNVLSVQSEVGTQLQELDNLDSLGSDRTLSNKQRLT 279 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + V+ A + ++ SY T +Q LS+ Sbjct: 280 DLVDVDYTAAISSYVMQQAALQASYTTFTNMQGLSL 315 >gi|325524326|gb|EGD02428.1| flagellar hook-associated protein FlgL [Burkholderia sp. TJI49] Length = 411 Score = 39.3 bits (90), Expect = 0.85, Method: Composition-based stats. Identities = 38/365 (10%), Positives = 96/365 (26%), Gaps = 55/365 (15%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 ++ +++ + ++ L L+++ ++ + ++ +G + Sbjct: 45 GAAQAVQLSMTSATLSQYATNQNVALSSLQKEDQTLTTVNNLLNTIHSSVMQAGDGSLSD 104 Query: 108 NKFPINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFT------------- 153 + A L+ + +T AN TD G YLF+G S+ P + Sbjct: 105 SDRSAIATQLQGYRDQLMTLANTTDGAGNYLFAGYQSTTAPFSNSTGGGAIYSGDRGARQ 164 Query: 154 ---KDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYW 210 D+ D F+ ++ + ++ + Sbjct: 165 VQIADTRTIAQGDDGASVFMSVPMLGSQPVPAAGARNLGTGTIGAVSITDPSAATNTHQF 224 Query: 211 ANNWSNASDHNI----------------------------------KYRIKDTEGIDVSA 236 + SD + Sbjct: 225 TITFGGTSDAPTYTVTDNTATPATTTDPQPYEAGTAIALGNGLTVPVSGTPASGDTFSVT 284 Query: 237 NVNMRGIRDIMFVAVIGTEF----LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLG 292 G + + + A + + ++ I+ +A +G Sbjct: 285 PAPQAGTDVFATLDTMIAALKVPVGNDTAAAAALANTMTTGTTKLDNTMTNILTVQASVG 344 Query: 293 ISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLS 352 E+ I + Q + + ++ T +Q + N + + +LQ LS Sbjct: 345 GREQEIQAMQAVNQTNTLQVTSNLADVTSTNMVTTISQFLQMQNALTGAQKAYAQLQNLS 404 Query: 353 ILNYL 357 + Y+ Sbjct: 405 LFQYI 409 >gi|258422532|ref|ZP_05685440.1| large surface anchored protein [Staphylococcus aureus A9635] gi|257847289|gb|EEV71295.1| large surface anchored protein [Staphylococcus aureus A9635] Length = 7732 Score = 39.3 bits (90), Expect = 0.85, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 112/361 (31%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q ++ L K ++ H Sbjct: 5443 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTNAKNALNGDANVRQAKSDAKANLGTLTH 5502 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ N + Sbjct: 5503 LNNAQKQDLTSQIEDATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKANENYIDADP 5562 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 5563 TKKTAFDNAITQAESYLNKDH---GANKDKQAVEQTIQSVTSTENALNGDANLQRAKTEA 5619 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ HL A + Q +D + A + ++A D +K I D + I Sbjct: 5620 TQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNSAMDQ-LKQAIADHDTIV 5678 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V +G+ Sbjct: 5679 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 5737 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 5738 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 5797 Query: 343 M 343 Sbjct: 5798 A 5798 >gi|293115383|ref|ZP_05791245.2| flagellar hook-associated protein 3 [Butyrivibrio crossotus DSM 2876] gi|292810061|gb|EFF69266.1| flagellar hook-associated protein 3 [Butyrivibrio crossotus DSM 2876] Length = 491 Score = 39.3 bits (90), Expect = 0.87, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 50/137 (36%), Gaps = 2/137 (1%) Query: 221 NIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQG 280 +I+ +I + + S + ++I +I + K ++ V++ Sbjct: 357 DIENKIAKLKTMKESGAYSDDEKKNI--DTMIAASEKEHDYALDNMKKTFSKEITNVKEY 414 Query: 281 LSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEM 340 + + A LG + + + L + D S++ V+ + S+ + Sbjct: 415 QQTVSLELADLGARQNRLTLTKDRLSEQYTTFDDLKSRNEDVDLEDVVIKFSSARTLYQA 474 Query: 341 SYMITTKLQKLSILNYL 357 + + + S+L+Y+ Sbjct: 475 ALSAASSCVQKSLLDYI 491 Score = 37.8 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 22/187 (11%), Positives = 56/187 (29%), Gaps = 5/187 (2%) Query: 11 IFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSN- 69 + + + + + E+ T + L + I + L N Sbjct: 3 MNQTLRN-VSKSKNNLNTSENELATEKKITRPSDDPIVAIRALSLRSSLSEINQYLKHNI 61 Query: 70 SLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFAN 129 L + + L++M I+ D+ + N +L+ + + AN Sbjct: 62 PDAESWLDVTHSSLNNMDGILSDIFQYCNQGSSDQFTTNDRSAIIDVLKQYRTAIYSEAN 121 Query: 130 MTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN 189 G+Y F+G + + +S K + + E + + ++ + + Sbjct: 122 ADYAGRYCFTGYKTDTS-FTFLTSTESDKKYEITETFKA--EAVTTDNIMKNSVDATKVT 178 Query: 190 AQQMTDF 196 + Sbjct: 179 GINAEKY 185 >gi|317156379|ref|XP_001825702.2| C6 transcription factor [Aspergillus oryzae RIB40] Length = 598 Score = 39.3 bits (90), Expect = 0.88, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 43/132 (32%), Gaps = 17/132 (12%) Query: 32 EMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQ 91 ++ T QS+D L+L + + + + +AE R++ + + S+ + Sbjct: 6 QIATRQSADVCLRLKRKCQLSVSVRRRRGLMAEGFDM------RIARLEEKMESLLAAMD 59 Query: 92 DMVGPLVILL----EGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKP 147 V L+ ++ + M + + +N T +++ P Sbjct: 60 TFVSSSGSLVGLADTTRSGATSISASVNMTSSGFSERLALSNTTVS-------THTNSSP 112 Query: 148 LNGYFTKDSLAK 159 + A Sbjct: 113 CSDSSAPSPTAS 124 >gi|224534347|ref|ZP_03674925.1| flagellar hook-associated protein 3 [Borrelia spielmanii A14S] gi|224514449|gb|EEF84765.1| flagellar hook-associated protein 3 [Borrelia spielmanii A14S] Length = 424 Score = 39.3 bits (90), Expect = 0.88, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 39/92 (42%) Query: 266 RNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 ++ + L+ + L ++ A LG E ++ + + + + + ++ Sbjct: 332 EELVGSRSLAEIDGSLKRLLISVADLGAKENRLDRSYERISKETADMKEDMVQYTDLDVT 391 Query: 326 TAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 A L+ ++S I+ K+ + ++L+++ Sbjct: 392 KAITNLNMASLAYQVSLGISAKIMQTTLLDFI 423 >gi|253733319|ref|ZP_04867484.1| extracellular matrix binding protein [Staphylococcus aureus subsp. aureus TCH130] gi|253728859|gb|EES97588.1| extracellular matrix binding protein [Staphylococcus aureus subsp. aureus TCH130] Length = 10547 Score = 39.3 bits (90), Expect = 0.89, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++S++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNSVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GTNKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ HL A + Q +D + A + NA D +K I D + I Sbjct: 6513 TQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLDNAMDQ-LKQGIADHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V + + + Sbjct: 6572 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETSLNG-DSN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|10281324|gb|AAG14365.1| flagellin B [Agrobacterium sp. H13-3] Length = 411 Score = 39.3 bits (90), Expect = 0.89, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 36/79 (45%), Gaps = 6/79 (7%) Query: 277 VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLIN 336 V++ L+ + A LG + I+ + F ++ ID I + + + + +L L Sbjct: 327 VEKALTSLTSAAAELGSIKMRIDLQEDFASKLSDSIDKGIGRLVDADMNEESTKLKALQT 386 Query: 337 KIEMSYMITTKLQKLSILN 355 + +++ +Q LSI N Sbjct: 387 QQQLA------IQSLSIAN 399 >gi|32473855|ref|NP_866849.1| flagellar hook-associated protein 3 [Rhodopirellula baltica SH 1] gi|32444391|emb|CAD74390.1| probable flagellar hook-associated protein 3 [Rhodopirellula baltica SH 1] Length = 651 Score = 39.3 bits (90), Expect = 0.89, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 40/88 (45%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 ++ + + + L R +G+ + + R ++N+N ++ + +S ++ + + Sbjct: 564 IGRLQARLDEDLDDSTRTRGRVGVWHSALQDSRTAVENENVLLQSQLSDAMDADLAVVIS 623 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 +L +E S + +++LNYL Sbjct: 624 ELQARQVALEASMRFVGQTSGITVLNYL 651 >gi|325291931|ref|YP_004277795.1| Flagellin B protein [Agrobacterium sp. H13-3] gi|325059784|gb|ADY63475.1| Flagellin B protein [Agrobacterium sp. H13-3] Length = 411 Score = 39.3 bits (90), Expect = 0.90, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 36/79 (45%), Gaps = 6/79 (7%) Query: 277 VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLIN 336 V++ L+ + A LG + I+ + F ++ ID I + + + + +L L Sbjct: 327 VEKALTSLTSAAAELGSIKMRIDLQEDFASKLSDSIDKGIGRLVDADMNEESTKLKALQT 386 Query: 337 KIEMSYMITTKLQKLSILN 355 + +++ +Q LSI N Sbjct: 387 QQQLA------IQSLSIAN 399 >gi|301053276|ref|YP_003791487.1| flagellar hook-associated protein [Bacillus anthracis CI] gi|300375445|gb|ADK04349.1| flagellar hook-associated protein [Bacillus cereus biovar anthracis str. CI] Length = 287 Score = 39.3 bits (90), Expect = 0.90, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 52/148 (35%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + + +I + Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K V ++ L + + + + V Sbjct: 63 QKDLADSKNVLTQTENTLQGVLKSVTRTDQLMLQALSEQNGEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ ++P T Sbjct: 123 YLANTKEQGRYIFGGDSTEKQPFTEDGT 150 >gi|260439399|ref|ZP_05793215.1| flagellin [Butyrivibrio crossotus DSM 2876] gi|292808195|gb|EFF67400.1| flagellin [Butyrivibrio crossotus DSM 2876] Length = 452 Score = 39.3 bits (90), Expect = 0.92, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 12/175 (6%) Query: 176 SLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVS 235 S A E +++ + + F +E D +A A+D I + + Sbjct: 280 SSTATLTTEGANITVKDIGSFEMDIEIP--GDTKYAECVIKATDIGI---------MRIQ 328 Query: 236 ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISE 295 A N I V NL + K ++ + +S + R+ LG + Sbjct: 329 AGANEGQQLSIGIPEVSMHTLGLDNLNLRTEDC-AKDAMTRLDDAISKVSSIRSKLGAYQ 387 Query: 296 KNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 + L N I +S+ + + + K + + I + + Sbjct: 388 NRLETATGNLNEYNENITAALSRIEDCDMAAEMTEFTAQNVKTQAATSILAQANQ 442 >gi|196039109|ref|ZP_03106416.1| putative flagellar hook-associated protein FlgL [Bacillus cereus NVH0597-99] gi|196030254|gb|EDX68854.1| putative flagellar hook-associated protein FlgL [Bacillus cereus NVH0597-99] Length = 287 Score = 39.3 bits (90), Expect = 0.94, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 50/148 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + ++ L + + + + V Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLMLQALSEQNGEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 123 YLANTKEQGRYIFGGDSTEKPPFTEDGT 150 >gi|115353110|ref|YP_774949.1| flagellar hook-associated protein FlgL [Burkholderia ambifaria AMMD] gi|115283098|gb|ABI88615.1| flagellar hook-associated protein 3 [Burkholderia ambifaria AMMD] Length = 413 Score = 39.3 bits (90), Expect = 0.98, Method: Composition-based stats. Identities = 45/367 (12%), Positives = 101/367 (27%), Gaps = 57/367 (15%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 ++ +++ + + L L S+ ++ + +V +G + Sbjct: 45 GAAQAVQLSMTSATLSQYATNQTAALASLQAEDQALQSVSGVLTGVQTLVVRAGDGSLAD 104 Query: 108 NKFPINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGY--------------- 151 + A L+ + +T AN D G YLF+G+N+S P Sbjct: 105 SDRSALATQLQGYRDQLMTLANSNDGAGNYLFAGLNNSSAPFTSSPNGSVSYVGDSGTRQ 164 Query: 152 -FTKDSLAKKSFDQMLQGFLE-----------ENSKSLLAGQHLEVSSMNAQQMTDFIKQ 199 DS + D F+ + + G V+ T+ + Sbjct: 165 VQIGDSSSVAQGDTGSAVFMSVPSLGSAPVPSAGAANTGTGTITAVTVTTPSAATNGHQF 224 Query: 200 LEDKFSDDEYWANNWSNASDHNIK----------YRIKDTEGIDVSANVNMRGIRDIM-- 247 ++ S I G+ V+ + Sbjct: 225 SIAFGGTPAAPTYTVTDNSAKPPTTTPAQAYTAGASIALGGGMTVAVSGTPAAGDTFAVT 284 Query: 248 -----------------FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 ++ + T + A + V + + +A Sbjct: 285 PGPQASGGADIFSTLDSMISALKTPVTGNPVAAAALSNALMTGSIKVGNTMRNVTTIQAS 344 Query: 291 LGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 +G E+ + + Q + + ++ T +Q + N + + +LQ Sbjct: 345 VGGREQEVKAMQAVNQTASLQTTSNLTDLTSTNMTTTISQYLQVQNALTGAQKAYVQLQN 404 Query: 351 LSILNYL 357 LS+ Y+ Sbjct: 405 LSLFQYI 411 >gi|327542209|gb|EGF28700.1| flagellar hook-associated protein 3 [Rhodopirellula baltica WH47] Length = 651 Score = 39.3 bits (90), Expect = 0.99, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 40/88 (45%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 ++ + + + L R +G+ + + R ++N+N ++ + +S ++ + + Sbjct: 564 IGRLQARLDEDLDDSTRTRGRVGVWHSALQDSRTAVENENVLLQSQLSDAMDADLAVVIS 623 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 +L +E S + +++LNYL Sbjct: 624 ELQARQVALEASMRFVGQTSGITVLNYL 651 >gi|218512918|ref|ZP_03509758.1| flagellin C protein [Rhizobium etli 8C-3] Length = 145 Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + L+T++ LS + A LG I+ + F+ ++ ID+ + + + + + Sbjct: 54 IQSALTTIESALSAMTSAGAQLGSISTRIDLQEDFVGALSDSIDSGVGRLVDADMEEESS 113 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +LS L + +++ +Q LSI N Sbjct: 114 KLSALQTQQQLA------IQSLSIAN 133 >gi|171322358|ref|ZP_02911182.1| flagellar hook-associated protein 3 [Burkholderia ambifaria MEX-5] gi|171092320|gb|EDT37689.1| flagellar hook-associated protein 3 [Burkholderia ambifaria MEX-5] Length = 413 Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 45/367 (12%), Positives = 100/367 (27%), Gaps = 57/367 (15%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 ++ +++ + + L L S+ ++ + +V +G + Sbjct: 45 GAAQAVQLSMTSATLSQYATNQTAALASLQAEDQALQSVSGVLTGVQTLVVRAGDGSLAD 104 Query: 108 NKFPINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGY--------------- 151 A L+ + +T AN D G YLF+G+N+S P Sbjct: 105 GDRSALATQLQGYRDQLMTLANSNDGAGNYLFAGLNNSSAPFTSSPNGSVSYVGDSGTRQ 164 Query: 152 -FTKDSLAKKSFDQMLQGFLE-----------ENSKSLLAGQHLEVSSMNAQQMTDFIKQ 199 DS + D F+ + + G V+ + T+ Sbjct: 165 VQIGDSSSVAQGDTGSAVFMSVASLGSAPVPSAGAANTGTGTITAVTVTSPSAATNGHHF 224 Query: 200 LEDKFSDDEYWANNWSNASDHN----------IKYRIKDTEGIDVSANVNMRGIRDIM-- 247 ++ S I G+ V+ + Sbjct: 225 SIAFGGTPAAPTYTVTDNSATPPTTTAAQAYTAGASIALGGGMTVAVSGTPAAGDTFAVT 284 Query: 248 -----------------FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 +A + T + A + + + + +A Sbjct: 285 PGPQASGGADVFSTLDSMIAALKTPVTGNPVAAAALSNAMMTGSIKLGNTMRNVTTIQAS 344 Query: 291 LGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 +G E+ + + Q + + ++ T +Q + N + + +LQ Sbjct: 345 VGGREQEVKAMQTVNQTASLQTTSNLTDLTSTNMTTTISQYLQVQNALTGAQKAYVQLQN 404 Query: 351 LSILNYL 357 LS+ Y+ Sbjct: 405 LSLFQYI 411 >gi|86360666|ref|YP_472554.1| flagellin C protein [Rhizobium etli CFN 42] gi|86284768|gb|ABC93827.1| flagellin C protein [Rhizobium etli CFN 42] Length = 302 Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + L+T++ LS + A LG I+ + F+ ++ ID+ + + + + + Sbjct: 211 IQSALTTIESALSAMTSAGAQLGSISTRIDLQEDFVGALSDSIDSGVGRLVDADMEEESS 270 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +LS L + +++ +Q LSI N Sbjct: 271 KLSALQTQQQLA------IQSLSIAN 290 Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats. Identities = 35/247 (14%), Positives = 74/247 (29%), Gaps = 25/247 (10%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I+T++ + +N + + TG D A + + ++ Sbjct: 2 TSINTNNSAMAALQTLRSINSNLETTQNSVSTGYRVDTASDNAAYWSIATTMRSDNKALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ + S +V ++ LV E D +K L++ S Sbjct: 62 AVSDALGLGAAKVDTAYTAMDSAIDVVDEIKAKLVAATEDGVDKSKVQEEISQLQEQLMS 121 Query: 124 FVTFAN-------------MTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQML---- 166 A+ + ++ G + + Y S M Sbjct: 122 IAQSASFSGENWVAGADGTKSVVSSFVRDGSGAVSVKMTDYVLDTSSTGNVLFGMNGGSI 181 Query: 167 ---QGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIK 223 G L + + L++++ Q+ + +E S + A +I Sbjct: 182 ETSSGILGTADANGDSVYSLDITNFTTGQIQSALTTIESALSAMTS-----AGAQLGSIS 236 Query: 224 YRIKDTE 230 RI E Sbjct: 237 TRIDLQE 243 >gi|190895629|ref|YP_001985921.1| flagellin C protein [Rhizobium etli CIAT 652] gi|190699574|gb|ACE93658.1| flagellin C protein [Rhizobium etli CIAT 652] Length = 302 Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + L+T++ LS + A LG I+ + F+ ++ ID+ + + + + + Sbjct: 211 IQSALTTIESALSAMTSAGAQLGSISTRIDLQEDFVGALSDSIDSGVGRLVDADMEEESS 270 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +LS L + +++ +Q LSI N Sbjct: 271 KLSALQTQQQLA------IQSLSIAN 290 Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats. Identities = 35/247 (14%), Positives = 74/247 (29%), Gaps = 25/247 (10%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I+T++ + +N + + TG D A + + ++ Sbjct: 2 TSINTNNSAMAALQTLRSINSNLETTQNSVSTGYRVDTASDNAAYWSIATTMRSDNKALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ + S +V ++ LV E D +K L++ S Sbjct: 62 AVSDALGLGAAKVDTAYTAMDSAIDVVDEIKAKLVAATEDGVDKSKVQEEISQLQEQLMS 121 Query: 124 FVTFAN-------------MTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQML---- 166 A+ + ++ G + + Y S M Sbjct: 122 IAQSASFSGENWVAGADGTKSVVSSFVRDGSGAVSVKMTDYVLDTSSTGNVLFGMNGGSI 181 Query: 167 ---QGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIK 223 G L + + L++++ Q+ + +E S + A +I Sbjct: 182 ETSTGILGTADANGDSVYSLDITNFTTGQIQSALTTIESALSAMTS-----AGAQLGSIS 236 Query: 224 YRIKDTE 230 RI E Sbjct: 237 TRIDLQE 243 >gi|116255719|ref|YP_771552.1| putative flagellin protein [Rhizobium leguminosarum bv. viciae 3841] gi|115260367|emb|CAK03471.1| flagellin. Expressed but not required for motility [Rhizobium leguminosarum bv. viciae 3841] gi|262283897|gb|ACY40758.1| FlaE [Rhizobium leguminosarum bv. viciae] Length = 302 Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + LST++ LS + A LG I + F+ ++ ID+ + + + + + Sbjct: 211 IQSALSTIESALSAMTSAGAQLGSISTRIELQEDFVGALSDSIDSGVGRLVDADMEEESS 270 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +LS L + +++ +Q LSI N Sbjct: 271 KLSALQTQQQLA------IQSLSIAN 290 >gi|294497860|ref|YP_003561560.1| flagellin [Bacillus megaterium QM B1551] gi|294347797|gb|ADE68126.1| flagellin [Bacillus megaterium QM B1551] Length = 242 Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 33/102 (32%) Query: 227 KDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIE 286 + N D+ F + T K++ ++ + T+ + + + Sbjct: 141 GNAGKFTFQIGANKDQKIDVTFAKMDSTSLGVKDIDLSVDAAISTAAIDTIDTAIKNVSD 200 Query: 287 QRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAH 328 +R+ LG + + L + + S+ V+ A Sbjct: 201 ERSQLGAKQNRLEHTINNLSTSSENLTAAESRIRDVDYALAA 242 >gi|323490120|ref|ZP_08095340.1| flagellin [Planococcus donghaensis MPA1U2] gi|323396168|gb|EGA88994.1| flagellin [Planococcus donghaensis MPA1U2] Length = 431 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 31/270 (11%), Positives = 76/270 (28%), Gaps = 8/270 (2%) Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 ++SN+ + + S + + + + + ++ + L S Sbjct: 165 TFINSNATLATKASVTLTATAGVNTVDKSDSLTIIANGKTYNVGTTAGQTYDDLAKKITS 224 Query: 124 FVTFANM---TDEGQYLFSG--INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLL 178 V A + G + F N+ + T +L N+ L Sbjct: 225 TVDGATATWDSTAGTFKFESNDANADQSISVAETTLGALDGTKDFTTAATDTGSNASGLD 284 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 A N +T E + + + S + I I ++ + + Sbjct: 285 AANTTFSYEGNKVTVTGGSAGFEGLTFNLKA--DVGSTTTATVIGSTIDVSDQLTMQIGS 342 Query: 239 NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 N I A+ + ++ ++++ + + +R+ LG + + Sbjct: 343 NEGQSISININAMDASNLGVADIDVTTHEG-ASSAITSIDAAIKSVSSERSKLGAVQNRL 401 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAH 328 L + S+ V+ A Sbjct: 402 EHSINNLNTSAENLTAAESRIRDVDYAEAA 431 >gi|323492331|ref|ZP_08097484.1| flagellar hook-associated protein FlgL [Vibrio brasiliensis LMG 20546] gi|323313378|gb|EGA66489.1| flagellar hook-associated protein FlgL [Vibrio brasiliensis LMG 20546] Length = 298 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 95/306 (31%), Gaps = 58/306 (18%) Query: 51 SILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKF 110 +L ++E + I + + + V LS+ + HL S+ + ++ + ++ G ++ Sbjct: 48 QLLNLDREGSAINQYQSNIANVKTALSSQEVHLDSVNESLKSINDLVLWGANGTLTDDDR 107 Query: 111 PINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGF 169 L S V+ N DE G+YLFSG + + + + Sbjct: 108 VGIITELESLRSSIVSSFNAQDEEGRYLFSGTKTD----------TAALSNASGSYVIEG 157 Query: 170 LEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDT 229 + +A ++M A+++ D DD Sbjct: 158 NNDKRVVTVAKGVSMEANMTAEEILDLGGNNVLNQLDD---------------------- 195 Query: 230 EGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRA 289 + EF + A + L+ ++ ++ Sbjct: 196 ----------------------LIAEFKAP---TAAFRTTVESSLNAIESTSGNVLSALT 230 Query: 290 VLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQ 349 LG N++ +D S ++ A +LS + ++ + K+ Sbjct: 231 ELGGRHNNLDLMDSAHGENKLFVDKVTSDLSALDYGEASVRLSNYMAALQATQASYMKIN 290 Query: 350 KLSILN 355 LS+ N Sbjct: 291 DLSLFN 296 >gi|160881968|ref|YP_001560936.1| flagellin domain-containing protein [Clostridium phytofermentans ISDg] gi|160430634|gb|ABX44197.1| flagellin domain protein [Clostridium phytofermentans ISDg] Length = 502 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 16/144 (11%), Positives = 45/144 (31%), Gaps = 6/144 (4%) Query: 216 NASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLS 275 A N+ + +D+ N ++ V + + + +S Sbjct: 358 GAGSDNVSITVLQAGPMDLQIGANEGQTMEVRIPRVDTYTLGTNIVNVCTQEG-ASSAIS 416 Query: 276 TVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLI 335 + + ++ + + RA LG + + L I +S+ + + + Sbjct: 417 ILSKAITMVTDIRAKLGAYQNRLEHAIANLDVGAENITEALSRIEDTDMAKEMSLFTQKN 476 Query: 336 NKIEMSYMITTKLQK-----LSIL 354 ++ + + + LS+L Sbjct: 477 VLVQAGTAMLAQANQRPQNILSLL 500 >gi|91225880|ref|ZP_01260849.1| flagellar hook-associated protein L [Vibrio alginolyticus 12G01] gi|269965417|ref|ZP_06179536.1| flagellar hook-associated protein [Vibrio alginolyticus 40B] gi|91189530|gb|EAS75806.1| flagellar hook-associated protein L [Vibrio alginolyticus 12G01] gi|269829896|gb|EEZ84126.1| flagellar hook-associated protein [Vibrio alginolyticus 40B] Length = 397 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 11/168 (6%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQ 57 T IS+ ++ + + E++ +G+ SD L + EQ Sbjct: 1 MLTRISSFHNYQSVQNDLRRQENKVHHNQEQLASGKKLLKPSDDPLAAHYIQNISQQQEQ 60 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 + +++ + LV RL + ++++ + + + ++ G L Sbjct: 61 LQQYLSSIV----LVRNRLENHEVNIANAENFADESKRLTMEMINGAFSAEDRQAKKREL 116 Query: 118 RDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ 164 + +F+ N D G Y+F+G +P Y KD + + D Sbjct: 117 EEIANNFLNLVNSQDESGNYVFAGTKPKSQPF--YRDKDGSVQYAGDD 162 >gi|330809605|ref|YP_004354067.1| methyl-accepting chemotaxis protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377713|gb|AEA69063.1| Putative methyl-accepting chemotaxis protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 598 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 44/127 (34%), Gaps = 3/127 (2%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 +TT IS S+ + + + +S+ E G+ +D + S + Sbjct: 329 QTTQISHSARETQKVVERASGHFESMIGDFESTNGKLADIATHIQQFADSNTGIN---DR 385 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + + + L+ +R+ S + + + + L + G + A RD+ Sbjct: 386 VTQIHADSQLIDQRMQHSATATRDLSGVAEKVQALLGRFVLGHGKLDAAITRASQCRDTL 445 Query: 122 ESFVTFA 128 + + Sbjct: 446 QVRLEAL 452 >gi|291526820|emb|CBK92406.1| Flagellin and related hook-associated proteins [Eubacterium rectale M104/1] Length = 510 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 57/187 (30%), Gaps = 2/187 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + I K + +M T + + L +H+ + Sbjct: 3 ITNNMIMGNTKTNINSTKVLVDKYNTQMTTQKKISKASEDPVIAIRSLRLSTSLSHLDQY 62 Query: 66 LHSN-SLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 +N + + +Q LS+M+ ++ D+ V + L E Sbjct: 63 KDNNIPDASSWMDVTQTALSNMKSLLTDIRTQCVNGSTDTLTADVRNTILQQLTALSEQV 122 Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 T N G+ +F+G +S K L S + + + E+ + Sbjct: 123 YTEGNADYAGRTVFTGYRTSSK-LTFQKDTKSTYQITQEFSAADLSEKRYYTNGVTVPNS 181 Query: 185 VSSMNAQ 191 +++ Sbjct: 182 INAATPD 188 >gi|229058372|ref|ZP_04196756.1| Flagellar hook-associated protein 3 [Bacillus cereus AH603] gi|228719881|gb|EEL71471.1| Flagellar hook-associated protein 3 [Bacillus cereus AH603] Length = 287 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 49/148 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNANWAKNQMMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + V L G + + + V Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGTNSEKELKAIGAEIEQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 123 YLANTKEQGRYIFGGDSAEQVPFTEDGT 150 >gi|222149358|ref|YP_002550315.1| flagella associated protein [Agrobacterium vitis S4] gi|221736342|gb|ACM37305.1| flagella associated protein [Agrobacterium vitis S4] Length = 319 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 42/351 (11%), Positives = 100/351 (28%), Gaps = 41/351 (11%) Query: 5 GISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAE 64 +S +S L +K ++ TG+ D A + + + ++ Sbjct: 3 SVSINSTSASALSLLSGSSKALEATQTKVATGKKVDDASDNAAYWSIATTMKSDSLSLSS 62 Query: 65 RLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 + +L T+ L +V D+ L+ + L+D + Sbjct: 63 AEDATALSAAVSDTAALGLEQATGLVSDIQAKLIASKAAGANKGAINDEISQLKDQLSTV 122 Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + GQ + S S + N + Sbjct: 123 AQS--SSFNGQNWLA-----------LDANQSPKVTSMVSSVGSDGSGNLAVNVTNFDTA 169 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 S + ++ +ASD + T I + + + Sbjct: 170 QSVLTSKN-----------------------DASDGILTR---STLTIGSDGSASEYYLM 203 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 ++ ++D N M+ Q LS I + A +G ++ I+ Sbjct: 204 NVGSQTPAAPTAAEIAISDDTSNAQIDAMIGATQSILSSITDASAAVGATQNRISNSSDL 263 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLST--LINKIEMSYMITTKLQKLSI 353 +++ + I + + +LS + ++++ + + Q+ S+ Sbjct: 264 MKDLQDTATVSIGRLTDADMEEEATKLSAQSVQSQLQTASLSIANSQQKSL 314 >gi|162421086|ref|YP_001606479.1| flagellar hook-associated protein 3 [Yersinia pestis Angola] gi|162353901|gb|ABX87849.1| flagellar hook-associated protein 3 [Yersinia pestis Angola] Length = 248 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 55/145 (37%), Gaps = 1/145 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +STS ++++ ++ +++ TG+ + + Q ++ ++ Sbjct: 3 LSTSMLYQQNMQGITNAQSLWMQTGQQLSTGKRVVNPSDDPMAASQAVMVSQAESENSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + S L+ +Q + ++ ++ A L+ + + Sbjct: 63 TLARSFARQSSSLETTVLAQTTSTIQSIQSLVISAKNDTLSDDDRASYATQLQGLKDQLL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKPLN 149 AN TD G+Y+F+G S + P Sbjct: 123 NQANTTDGNGRYIFAGFKSDKPPFA 147 >gi|315641797|ref|ZP_07896801.1| phage infection protein [Enterococcus italicus DSM 15952] gi|315482472|gb|EFU73011.1| phage infection protein [Enterococcus italicus DSM 15952] Length = 905 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 88/281 (31%), Gaps = 23/281 (8%) Query: 45 LGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGK 104 LG++ + E + +A + + +++ L ++ + D+ L Sbjct: 327 LGSQASGTSE-----SVLAFAKQLQTALPTIITSVDTTLDAISQAAGDVQTTTSDLQTLL 381 Query: 105 TDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ 164 N + E+ N L + + + + L S A S Q Sbjct: 382 DKNELTDAEKQQVVTLLEALAAHFNTQAT---LLNSVITLLENLQ--QATGSTALDSVIQ 436 Query: 165 MLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY 224 L+ E + S LA + ++ D IK A + N+K Sbjct: 437 QLKTV--EQTVSDLATRATSLAEQAKNGEFDQIKTDISALLTSANQAAGAVQTTITNVKA 494 Query: 225 RIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGI 284 + + I N ++ + +S+ + L TV+ +S + Sbjct: 495 -LNVGDSITTIVN-------QLIDTLTTASSLMSQ-VNFEQLESLLTATHGTVKNAISIL 545 Query: 285 IEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH 325 + +A L + +++ L I I+K G + + Sbjct: 546 EKYQAQLPAIRQELSDANTLLNGHMTQIVDAINK--GADLY 584 >gi|258614829|ref|ZP_05712599.1| two component LuxR family transcriptional regulator [Enterococcus faecium DO] Length = 122 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 43/114 (37%), Gaps = 9/114 (7%) Query: 71 LVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN------KFPINAGMLRDSYESF 124 L R+ Q + + ++I+ +++LL D + +++ + ++ Sbjct: 7 LTDIRMPK-QTGIDAAKEILAKFPKAILLLLTTFKDEEYIREAFSIGVKGYLIKQNLQAI 65 Query: 125 VTFANMTDEGQYLFSG--INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKS 176 + GQ +F I + + + T DS A SF + ++E + Sbjct: 66 IPSVKSAYNGQAVFGNEIIETFTQMMKNKPTIDSHAYASFSERELAIIKEVAAG 119 >gi|228964722|ref|ZP_04125829.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar sotto str. T04001] gi|228794972|gb|EEM42471.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar sotto str. T04001] Length = 296 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 8/152 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQ----SSDYGLQLGARVTSILEWEQEKNH 61 +ST +LN ++ +G+ S+ L + Sbjct: 12 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 71 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + S +++T+ +T Q L S+ + Q V L + + + Sbjct: 72 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQAL----SEQNGEKELKAIGAEIDQIL 127 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 + V AN ++G+Y+F G ++ P T Sbjct: 128 KQVVYLANTKEQGRYIFGGDSAENPPFTEDGT 159 >gi|228978343|ref|ZP_04138720.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis Bt407] gi|228781360|gb|EEM29561.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis Bt407] Length = 296 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 8/152 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQ----SSDYGLQLGARVTSILEWEQEKNH 61 +ST +LN ++ +G+ S+ L + Sbjct: 12 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 71 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + S +++T+ +T Q L S+ + Q V L + + + Sbjct: 72 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQAL----SEQNGEKELKAIGAEIDQIL 127 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 + V AN ++G+Y+F G ++ P T Sbjct: 128 KQVVYLANTKEQGRYIFGGDSAENPPFTEDGT 159 >gi|151221557|ref|YP_001332379.1| hypothetical protein NWMN_1345 [Staphylococcus aureus subsp. aureus str. Newman] gi|205716443|sp|A6QGY5|EBHB_STAAE RecName: Full=Extracellular matrix-binding protein ebhB; AltName: Full=ECM-binding protein homolog B; Flags: Precursor gi|150374357|dbj|BAF67617.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] Length = 7031 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 +++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6513 IQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 S N + ++ + V +G+ Sbjct: 6572 ASGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|317052273|ref|YP_004113389.1| chemotaxis sensory transducer [Desulfurispirillum indicum S5] gi|316947357|gb|ADU66833.1| chemotaxis sensory transducer [Desulfurispirillum indicum S5] Length = 573 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 64/202 (31%), Gaps = 5/202 (2%) Query: 149 NGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDE 208 + + + K+S D + Q + G +S + L E Sbjct: 313 ATFDAQSNKLKQSADHIEQIGNASSDVLNAMGDAASSTSQTLSMAQQGKENLSAAVLSME 372 Query: 209 YWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNV 268 N S+ S + + +N + + E + V Sbjct: 373 NIRENASSLSATVANLSGSTDQITTILGTINDIADQTNLLALNAAIEAARAGDSGRGFAV 432 Query: 269 LTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAH 328 + ++ ++ I E A+LG + ++ ++ + T + + V++ Sbjct: 433 VADEVRKLAERTQEAISEISAILGGLQSEAAIANASMKTTSDNVQTGVERFEAVDRF--- 489 Query: 329 AQLSTLINKIEMSYMITTKLQK 350 ST++ K+E + T+ Q+ Sbjct: 490 --FSTVLEKLEQIAAVNTQAQR 509 >gi|283470647|emb|CAQ49858.1| EbhA protein [Staphylococcus aureus subsp. aureus ST398] Length = 10544 Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6333 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6392 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6393 LNNAQKQDLTSQIEGVTTVNGVNGVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 6452 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6453 TNKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6509 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ HL A + Q +D + A + ++A D +K I D + I Sbjct: 6510 TQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNSAMDQ-LKQAIADHDTIV 6568 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V +G+ Sbjct: 6569 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6627 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6628 LATAKQQAKDALRQMTHLSNAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6687 Query: 343 M 343 Sbjct: 6688 A 6688 >gi|228952119|ref|ZP_04114214.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807651|gb|EEM54175.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 287 Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 8/152 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQ----SSDYGLQLGARVTSILEWEQEKNH 61 +ST +LN ++ +G+ S+ L + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + S +++T+ +T Q L S+ + Q V L G + + Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQAL----NGTNSEKELQAIGVEIDQIL 118 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 + V AN ++G+Y+F G ++ P T Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAKNPPFTEDGT 150 >gi|291526375|emb|CBK91962.1| Flagellin and related hook-associated proteins [Eubacterium rectale DSM 17629] Length = 510 Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 57/187 (30%), Gaps = 2/187 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + I K + +M T + + L +H+ + Sbjct: 3 ITNNMIMGNTKTNINSTKVLVDKYNTQMTTQKKISKASEDPVIAIRSLRLSTSLSHLDQY 62 Query: 66 LHSN-SLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 +N + + +Q LS+M+ ++ D+ V + L E Sbjct: 63 KDNNIPDASSWMDVTQTALSNMKSLLTDIRTQCVNGSTDTLTADVRNTILQQLTALSEQV 122 Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 T N G+ +F+G +S K L S + + + E+ + Sbjct: 123 YTEGNADYAGRTVFTGYRTSSK-LTFQKDTKSTYQITQEFSAADLSEKRYYTNGVTVPNS 181 Query: 185 VSSMNAQ 191 +++ Sbjct: 182 INAATPD 188 >gi|172061964|ref|YP_001809616.1| flagellar hook-associated protein FlgL [Burkholderia ambifaria MC40-6] gi|171994481|gb|ACB65400.1| flagellar hook-associated protein 3 [Burkholderia ambifaria MC40-6] Length = 413 Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 45/367 (12%), Positives = 101/367 (27%), Gaps = 57/367 (15%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 ++ +++ + + L L S+ ++ + +V +G + Sbjct: 45 GAAQAVQLSMTSATLSQYATNQTAALASLQAEDQALQSVSGVLTGVQTLVVRAGDGSLAD 104 Query: 108 NKFPINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGY--------------- 151 + A L+ + +T AN D G YLF+G+N+S P Sbjct: 105 SDRSALATQLQGYRDQLMTLANSNDGAGNYLFAGLNNSSAPFTSSPNGSVSYVGDSGTRQ 164 Query: 152 -FTKDSLAKKSFDQMLQGFLE-----------ENSKSLLAGQHLEVSSMNAQQMTDFIKQ 199 DS + D F+ + + G V+ T+ + Sbjct: 165 VQIGDSSSVAQGDTGSAVFMSVPSLGSAPVPSAGAANTGTGTITAVTVTTPSAATNGHQF 224 Query: 200 LEDKFSDDEYWANNWSNASDHN----------IKYRIKDTEGIDVSANVNMRGIRDIM-- 247 ++ S I G+ V+ + Sbjct: 225 SIAFGGTPAAPTYTVTDNSAKPPTTTAAQAYTAGASIALGGGMTVAVSGTPAAGDTFAVT 284 Query: 248 -----------------FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 ++ + T + A + V + + +A Sbjct: 285 PGPQASGGADIFSTLDSMISALKTPVTGNPVAAAALSNALMTDSIKVGNTMRNVTTIQAS 344 Query: 291 LGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 +G E+ + + Q + + ++ T +Q + N + + +LQ Sbjct: 345 VGGREQEVKAMQAVNQTASLQTTSNLTDLTSTNMTTTISQYLQVQNALTGAQKAYVQLQN 404 Query: 351 LSILNYL 357 LS+ Y+ Sbjct: 405 LSLFQYI 411 >gi|89902484|ref|YP_524955.1| flagellin-like protein [Rhodoferax ferrireducens T118] gi|89347221|gb|ABD71424.1| flagellin-like [Rhodoferax ferrireducens T118] Length = 410 Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 46/401 (11%), Positives = 111/401 (27%), Gaps = 51/401 (12%) Query: 7 STSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERL 66 S ++ + L+ L E + +G+ + IA Sbjct: 10 SANTYDNALRNLSMR-QSALSNLQENLTSGKKVVRASDDPTGAAQAERAMTRISRIATDQ 68 Query: 67 HSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVT 126 + ++ ++ L + +Q+ +V G + + L+ + + Sbjct: 69 RALEAQRNSIAMAEGTLGDVTDALQNFRELVVSAGNGVLTSAERKSITIQLQGLRDQVFS 128 Query: 127 FANMTD-EGQYLFSGINSSEKPL-------NGYFTKDSLAKKSFDQMLQGFL-------- 170 AN D GQ LFS + S+ P Y + + ++ F Sbjct: 129 LANRKDSNGQPLFSALGSALAPFVGPNAPPQDYAFNGLPGQSASSEVAIPFALDGDSAFM 188 Query: 171 ----------------EENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA--N 212 N K+ A + ++ A F + + + Sbjct: 189 LQTNRDGVYNVSLGSGTTNLKTGPATLNPPTAATGASYTISFTSVTAAAGNTTASYDIVD 248 Query: 213 NWSNASDHNIKYRIKDTE----------------GIDVSANVNMRGIRDIMFVAVIGTEF 256 + S A+ + V+ V + + V Sbjct: 249 SGSGAAVATGTKTYSTGQSFTVTEMPGLSLTITGTPTVADTVKVESSPSLFSVLDDAISS 308 Query: 257 LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYI 316 + ++ + + L + G+ + R G + + ++ ++ Sbjct: 309 IGSASSNATASQAVSQALGNIDIGMGRVSAVRGQAGDLLNRADRITSNQEARSIQLEADR 368 Query: 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 S++ ++ A + + ++QKLS+ NY+ Sbjct: 369 SRAEDLDMVKGIADFQNQQTGYQAALQSYAQVQKLSLFNYI 409 >gi|218662515|ref|ZP_03518445.1| flagellin C protein [Rhizobium etli IE4771] Length = 332 Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 35/315 (11%), Positives = 93/315 (29%), Gaps = 27/315 (8%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 +++N++ + TG + + I+ + + + T Sbjct: 16 LRDINRNMTVTQNHITTGMRVAKAADNAVYWSIATTARTDNKAISAVQDALGMAAATMGT 75 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 + + ++ +V ++ LV E D K L++ S A + + Sbjct: 76 AYTGVQNVVDVVSEIKAKLVAATEDGVDKAKINEELKQLQEQLRSVSESATFNSDNWVV- 134 Query: 139 SGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 +N+ P S + + + G L + + G + + ++ Sbjct: 135 --LNNDATPTQPRQIPASFIRNADGTVSVGMLSYHIDNTPVG-------ATSSKDARYLI 185 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLS 258 S + + + + ++ + + N + Sbjct: 186 DDRATGSGEYG------VLTSAHFASELGTSQNYVLMTSKNGT-----------TAGQVV 228 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 +L+ +M+S V L+ + + G EK I + F ++ I I + Sbjct: 229 ISLSATTTQGQIGEMISVVDAALTQLTTVGSAFGALEKRIELQNDFAAKLHDNITAGIGR 288 Query: 319 SIGVEQHTAHAQLST 333 + + ++L Sbjct: 289 LVDADMEEEASKLKA 303 >gi|258426771|ref|ZP_05687991.1| cell wall associated fibronectin-binding protein [Staphylococcus aureus A9299] gi|257849932|gb|EEV73890.1| cell wall associated fibronectin-binding protein [Staphylococcus aureus A9299] Length = 9810 Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 110/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++S++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNSVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GTNKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ L A + Q +D + A + +NA D +K I D + I Sbjct: 6513 TQAIDNLTQLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIGDHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V + + Sbjct: 6572 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETSLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|323700467|ref|ZP_08112379.1| flagellar hook-associated protein 3 [Desulfovibrio sp. ND132] gi|323460399|gb|EGB16264.1| flagellar hook-associated protein 3 [Desulfovibrio desulfuricans ND132] Length = 397 Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 46/139 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ I+ D KL + + + A + I+E N + Sbjct: 3 ISTAQIYSLSLNQMNSALNDVTKLTIMNASQKQVNSPSDDPAGMGRIVELSGYGNSLTGY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + + L T+ L + + + + + + + A ++ ++ Sbjct: 63 IDNCGVALDYLGTADDVLGTASETITAALELAEQASTETYTDEELDMMALEMQGYLDALY 122 Query: 126 TFANMTDEGQYLFSGINSS 144 AN +F+G ++ Sbjct: 123 AIANTQVGSDSIFAGDDTG 141 >gi|218534722|ref|YP_002424483.1| flagellin domain-containing protein [Methylobacterium chloromethanicum CM4] gi|218525871|gb|ACK86454.1| flagellin domain-containing protein [Methylobacterium chloromethanicum CM4] Length = 439 Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 6/95 (6%) Query: 261 LTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 +++ + K + TV + ++ I E LG ++ I+ ++ F+ D I + Sbjct: 340 ISNSTTDAALKAHIDTVDRAIAKITEAATTLGAAKTQIDGQKTFVDTLMKSNDRAIGILV 399 Query: 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + +L L + +++ +Q LSI N Sbjct: 400 DADIEEESTKLKALQTQQQLA------IQTLSIAN 428 >gi|327193046|gb|EGE59958.1| flagellin C protein [Rhizobium etli CNPAF512] Length = 302 Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + L+ V+ L + A LG K I+ + F+ ++ ID+ I + + + + Sbjct: 211 IQSALTNVEAALKSMTSAGAALGSLSKRIDNQEDFVSALSDSIDSGIGRLVDADMEEESS 270 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +LS L + +++ +Q LSI N Sbjct: 271 KLSALQTQQQLA------IQSLSIAN 290 >gi|293605010|ref|ZP_06687406.1| flagellar hook-associated protein 3 [Achromobacter piechaudii ATCC 43553] gi|292816615|gb|EFF75700.1| flagellar hook-associated protein 3 [Achromobacter piechaudii ATCC 43553] Length = 420 Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 1/143 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST+ ++ D +L E++ +G+ + + Q K+ + Sbjct: 3 LSTTMMYSNGLSGVLSQESDMNRLVEQVGSGRKFLTPADDPLSASLSIGVAQTKSMNSTY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L L S+ +QD+ ++ G ++ + L+ + ++ + Sbjct: 63 GLNRDTAMTNLGQESNVLDSITTALQDVRTRVIQAGNGTFADSDRQALSTALKSARDALL 122 Query: 126 TFANMTD-EGQYLFSGINSSEKP 147 AN TD GQYLFSG P Sbjct: 123 GLANSTDGNGQYLFSGYQGGVVP 145 >gi|156050327|ref|XP_001591125.1| hypothetical protein SS1G_07750 [Sclerotinia sclerotiorum 1980] gi|154692151|gb|EDN91889.1| hypothetical protein SS1G_07750 [Sclerotinia sclerotiorum 1980 UF-70] Length = 976 Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 43/129 (33%), Gaps = 11/129 (8%) Query: 189 NAQQMTDFIKQLEDK-------FSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 +M FIK ED + +E +A+ A + ++ DV +V Sbjct: 77 TIAKMPKFIKSEEDLKRGLLNCLTSNEGFASFVFPALFQKLDS---ESVRADVKIDVFD- 132 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 + + + +EF + V + + + + I + LG NI ++ Sbjct: 133 AMLECIRNYTNVSEFSTTIWDTLKWEVWNGENEDFINRSIENIAAVASQLGRQSSNIKDD 192 Query: 302 RVFLQNKNN 310 L N Sbjct: 193 NDKLAKYIN 201 >gi|258449718|ref|ZP_05697819.1| cell wall associated fibronectin-binding protein [Staphylococcus aureus A6224] gi|257856966|gb|EEV79866.1| cell wall associated fibronectin-binding protein [Staphylococcus aureus A6224] Length = 9810 Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 110/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++S++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNSVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GTNKDKQAVEQAIQSVTSTENALNGDANLQCAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ L A + Q +D + A + +NA D +K I D + I Sbjct: 6513 TQAIDNLTQLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIGDHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V + + Sbjct: 6572 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETSLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|86356322|ref|YP_468214.1| flagellin C protein [Rhizobium etli CFN 42] gi|86280424|gb|ABC89487.1| flagellin C protein [Rhizobium etli CFN 42] Length = 303 Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 L++++ GL + + + LG I + F+ ++ ID+ + + + + + Sbjct: 212 ISMALTSIEAGLEAMTKAASQLGSISTRIELQENFVGALSDSIDSGVGRLVDADMEEESS 271 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +L+ L + +++ +Q LSI N Sbjct: 272 KLTALQTQQQLA------IQSLSIAN 291 >gi|228920450|ref|ZP_04083795.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839080|gb|EEM84376.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 296 Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 8/152 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQ----SSDYGLQLGARVTSILEWEQEKNH 61 +ST +LN ++ +G+ S+ L + Sbjct: 12 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 71 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + S +++T+ +T Q L S+ + Q V L + + + Sbjct: 72 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQAL----SEQNGEKELKAIGAEIDQIL 127 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 + V AN ++G+Y+F G ++ + P T Sbjct: 128 KQVVYLANTKEQGRYIFGGDSAEKPPFTEDGT 159 >gi|94313610|ref|YP_586819.1| hypothetical protein Rmet_4688 [Cupriavidus metallidurans CH34] gi|93357462|gb|ABF11550.1| hypothetical protein Rmet_4688 [Cupriavidus metallidurans CH34] Length = 1385 Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 30/230 (13%), Positives = 67/230 (29%), Gaps = 14/230 (6%) Query: 35 TGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMV 94 TG ++ G+ + L+ +Q + + RL QA L+++ + +V Sbjct: 825 TGSAATGGVSAIGSTVADLK-QQAATYAPGLVAD---AQARLDALQAALTALSNAIAPLV 880 Query: 95 GPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTK 154 ++ ++ + + A T G L +G+ S Sbjct: 881 NT---SIDAAPALPNLATAITAVQSASDQLRATAGATVAGVSLPAGLRQSLI-----QAA 932 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNW 214 + + D L K+L A + + + + F+ + N Sbjct: 933 NVATALAGDLGTVAALVAEGKALFAALDAILGD--PKAFQALLSDADALFAHLKAVQNAL 990 Query: 215 SNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDG 264 + D +R+ + NV + + + L D Sbjct: 991 APLRDTLANFRLLEGAARQTLLNVLDAMMLALAVSDDVLRTLLQVLFGDE 1040 >gi|332092869|gb|EGI97937.1| flagellar hook-associated protein 3 [Shigella dysenteriae 155-74] Length = 197 Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 67/235 (28%), Gaps = 48/235 (20%) Query: 124 FVTFANMTD-EGQYLFSGINSSEKPLN----GYFTKDSLAKKSFDQMLQGFLEENSKSLL 178 + AN TD G+Y+F+G + P + Y K+ D + Sbjct: 1 MLNLANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGH------ 54 Query: 179 AGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANV 238 ++ D I S+ + +E Sbjct: 55 ----------TGDKIFDSIT-------------------SNAVAEPDGSASET------- 78 Query: 239 NMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 N+ + D A + T K ++ L+ ++ RA LG + Sbjct: 79 NLFAMLDSAIAA-LKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNEL 137 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 ++ +S + V+ + + ++ SY T +Q LS+ Sbjct: 138 ESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSL 192 >gi|50954395|ref|YP_061683.1| flagellar hook-associated protein 3 [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950877|gb|AAT88578.1| flagellar hook-associated protein 3 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 290 Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 97/358 (27%), Gaps = 70/358 (19%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M ST+ + L L++E G A V ++L ++ + Sbjct: 1 MTMRVTSTAQLLTTQRNLQA-AKASMNDLYQEGTRGVKIAKPSDDPAGVANLLTVRKQLS 59 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLV-ILLEGKTDNNKFPINAGMLRD 119 A+ + + T + L+ ++ + +V G + + Sbjct: 60 QNAQHTSNVDDGIGWMKTVDSALTGSADVISKIRDLVVQAANTGTSSPANQDSIVKSIEQ 119 Query: 120 SYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 ++ + AN G+ +F+G S A +FD F Sbjct: 120 LKQNLLALANTQYLGRSVFAGT--------------SDADTAFDVKSYAFNGTPGAE--- 162 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 + R+ + I VSA Sbjct: 163 ------------------------------------------VSRRVSPSATIPVSA--- 177 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 G + + T A + L+ + L+ I +A +G + + Sbjct: 178 -DGAAVFGTGSGSVFSLIDGIATKIAADRNVGSELAAIDSALNTISGAQAAIGTNFAQLQ 236 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ S+ + +L+ + + + K + ++++YL Sbjct: 237 LGTDA-----TTLEEARSRIEDADPADVVLRLNAQQVSYQTALAVAAKSIQKTLMDYL 289 >gi|229132552|ref|ZP_04261401.1| Flagellar hook-associated protein 3 [Bacillus cereus BDRD-ST196] gi|228650898|gb|EEL06884.1| Flagellar hook-associated protein 3 [Bacillus cereus BDRD-ST196] Length = 287 Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 50/148 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + + +I + Sbjct: 3 VSTFQNANWAKNQMMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + V L G + + + V Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGTNSEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 123 YLANTKEQGRYIFGGDSAEQAPFTEDGT 150 >gi|302333046|gb|ADL23239.1| extracellular matrix binding protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 10548 Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 110/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6337 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6396 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6397 LNNAQKQDLTSQIESATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 6456 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + +Y++ +T A G N ++ + + + + D LQ + Sbjct: 6457 TKKTAYDNAITQAESYLNKD---RGANKDKQAVEQAIQSVTTTENALNGDANLQRAKSDA 6513 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6514 TQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQSIADHDTIV 6572 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V +G+ Sbjct: 6573 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6631 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6632 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6691 Query: 343 M 343 Sbjct: 6692 A 6692 >gi|90418381|ref|ZP_01226293.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1] gi|90338053|gb|EAS51704.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1] Length = 297 Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I+T++ +N + + TG A + + + Sbjct: 2 TSINTNTSAMTALQSLSAINNSLDETQNRISTGYRVGAASDNAAYWSIATTMRSDNKALG 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ +++ +V ++ LV E D K L+ S Sbjct: 62 AVEDALGLGQAKVDTAYTGMTAAIDVVDEIKTKLVAAREPGVDKTKIQSEIKELQGQLTS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + A+ FSG N + + + ++ F ++ G Sbjct: 122 IASSAS--------FSGEN--------WLSIGTGIAAGTKNVVASFNRAADGTVSVGTI- 164 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + + K D + N GI Sbjct: 165 ------------GVDTTKTKLFDTD------------------------------NTNGI 182 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 D L+ LT + M+S V + + + + LG ++ ++ + Sbjct: 183 LDGARTGTTVVSTLA--LTGATTDAAISTMISDVDEAIGLMTTAASNLGAAKSRMDIQSE 240 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ N + I+ + + + +L L + ++ +Q LSI N Sbjct: 241 FVSNLRDSIEKGVGTLVDADMTEESTRLKALQTQQQLG------VQALSIAN 286 >gi|228938853|ref|ZP_04101453.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971734|ref|ZP_04132355.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228787824|gb|EEM35782.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820702|gb|EEM66727.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939353|gb|AEA15249.1| flagellar hook-associated protein FlgL [Bacillus thuringiensis serovar chinensis CT-43] Length = 287 Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 8/152 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQ----SSDYGLQLGARVTSILEWEQEKNH 61 +ST +LN ++ +G+ S+ L + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + S +++T+ +T Q L S+ + Q V L + + + Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQAL----SEQNGEKELKAIGAEIDQIL 118 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 + V AN ++G+Y+F G ++ P T Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAENPPFTEDGT 150 >gi|226320909|ref|ZP_03796460.1| flagellar hook-associated protein FlgL [Borrelia burgdorferi 29805] gi|226233681|gb|EEH32411.1| flagellar hook-associated protein FlgL [Borrelia burgdorferi 29805] Length = 234 Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 42/99 (42%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 L + ++ + L+ + + L ++ A LG E ++ + + + + + Sbjct: 135 DTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKEAADMKEDMIQ 194 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ A L+ ++S I+ K+ + ++L+++ Sbjct: 195 YTDLDVTKAITNLNMASLAYQVSIGISAKIMQTTLLDFI 233 >gi|118362326|ref|XP_001014390.1| hypothetical protein TTHERM_00522120 [Tetrahymena thermophila] gi|89296157|gb|EAR94145.1| hypothetical protein TTHERM_00522120 [Tetrahymena thermophila SB210] Length = 4049 Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 37/115 (32%) Query: 41 YGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVIL 100 G LG + + + +L N + L + +SS+Q+ + + Sbjct: 1734 VGGTLGKLNQQSPDISRLLSSQQGQLDVNKSYGQHLHVTDQGISSLQQSFNQQIQNNIQS 1793 Query: 101 LEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKD 155 G D + N+ + ++ N++ + N + P+ + Sbjct: 1794 NYGAQDKSTMINNSQNIANALIGNTKGMNVSQNLKQQIGIQNRDQFPVKTIYFPS 1848 >gi|285817114|gb|ADC37601.1| Putative Staphylococcal surface anchored protein; adhesin emb [Staphylococcus aureus 04-02981] Length = 9582 Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 110/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++S++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNSVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GTNKDKQAVEQAIQSVTSTENALNGDANLQCAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ L A + Q +D + A + +NA D +K I D + I Sbjct: 6513 TQAIDNLTQLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIGDHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V + + Sbjct: 6572 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETSLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|229591864|ref|YP_002873983.1| flagellar hook-associated protein FlgL [Pseudomonas fluorescens SBW25] gi|229363730|emb|CAY51131.1| putative flagellar hook-associated protein 3 [Pseudomonas fluorescens SBW25] Length = 540 Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 2/143 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST F+ + V+ E+ +G +L +Q+K+ +A+ Sbjct: 3 ISTQQYFDTSAAKYQNNYSGVVQAQEQASSGVRVQTAGDDPVAAQRLLMLQQQKDMLAQF 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + S + L+ ++ L+++ +Q L + G T + + + + + Sbjct: 63 SGNISNIQSSLTNEESVLTAISATIQAA-SQLALKAGGVTSDADRKSISVEVGALEDQLL 121 Query: 126 TFANMTDE-GQYLFSGINSSEKP 147 N D G YLFSG + P Sbjct: 122 GLLNSKDAAGNYLFSGSKTETPP 144 Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 31/86 (36%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 +S + + R +G + + + ++ T +S ++ A Sbjct: 453 LNSAVSNLTSSSDQVDNVRGSIGARQNALTVQSSENESVGLANKTTMSALANIDMGEAAI 512 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 L+ +E S + K+ +LS+ N Sbjct: 513 NLTLQQTMLEASQLAFVKISQLSLFN 538 >gi|332311248|gb|EGJ24343.1| Peptidoglycan binding protein [Listeria monocytogenes str. Scott A] Length = 2033 Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 82/294 (27%), Gaps = 37/294 (12%) Query: 50 TSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIV----QDMVGPLVILLEGKT 105 L + + NS RL + Q + + I Q V PL + + Sbjct: 1352 AQALTLAKTAAFEEVKDGVNSSAEDRLDSVQVSQTQLDAIKNGSNQGSVYPLTYSITKDS 1411 Query: 106 DNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQM 165 I + +D +T N D Y+ F + + + D Sbjct: 1412 KTVSVTIQVTVAKD-----LTAVNAHDSTIYI-----GDAWEEKDNFDSATNKEGATDIA 1461 Query: 166 LQGFLEENSKSLLAGQHLEVS----------SMNAQQMTDFIKQLEDKFSDDEYWA--NN 213 S + V+ ++ + + + + + W +N Sbjct: 1462 FSDVTVTGSVNTAVAGVYPVTYTYNGVSKKINVTVKAIKTAVNAHDSTIYTGDTWNARDN 1521 Query: 214 WSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKM 273 + +A D + + S N N G I + ++ ++ + + + Sbjct: 1522 FDSALDKDGNSVAFADVTVTGSVNTNETGTNTITYSYDGVSQTITVTVVENKEGISAHDS 1581 Query: 274 LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 + + ++ N + N ++ D +++ V+ A Sbjct: 1582 TIYAGESWN-----------AKDNFDSAFDKDGNAVDLEDVTVTEKPTVDTTKA 1624 >gi|167565018|ref|ZP_02357934.1| hypothetical protein BoklE_20880 [Burkholderia oklahomensis EO147] Length = 693 Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 32/262 (12%), Positives = 82/262 (31%), Gaps = 28/262 (10%) Query: 97 LVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQ-YLFSGINSSEKPLNGYFTKD 155 L+I + + E+ + E Q L +G+ + + ++ Sbjct: 98 LLIQERSGGMAGAVGTVISSMVNEIETISGALDSLAEVQGVLQAGLGTLNGLSDRLTVQE 157 Query: 156 SLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWS 215 + AK DQ+ Q + L Q ++ ++ + Sbjct: 158 NGAKALQDQINQEIENRKAAGALLAQRMDSLDIDVGNQKAMFQSQIQLL----------- 206 Query: 216 NASDHNIKYRIKDTEGIDVSANVN----MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTK 271 +SD + ++ S + G D + LS +T ++ Sbjct: 207 QSSDEIMASQV-------TSLSARLSDVEAGQGDGEDSDEVAASLLSAAITSVKKDHALA 259 Query: 272 KMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQL 331 + ++T+ ++G +A L + + + L + + I ++ H ++ Sbjct: 260 QQITTLSADING--NIKAQLQVEQTARVDADKALAEQITSLQAQIGDNLSQVIQEMHTEI 317 Query: 332 STLI---NKIEMSYMITTKLQK 350 K++ Y + ++Q+ Sbjct: 318 DATNGKVTKLQAQYTLKAQVQR 339 >gi|302335859|ref|YP_003801066.1| YhgE/Pip C-terminal domain protein [Olsenella uli DSM 7084] gi|301319699|gb|ADK68186.1| YhgE/Pip C-terminal domain protein [Olsenella uli DSM 7084] Length = 897 Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 35/273 (12%), Positives = 78/273 (28%), Gaps = 23/273 (8%) Query: 34 VTGQSSDYGLQLGARVTSILEWEQEKNHIAERL-HSNSLVTKRLSTSQAHLSSMQKIVQ- 91 TG D L + + + + + + L ++ V + ++ + ++ + Q Sbjct: 181 ATGVLGDADSSLDGALGDVRDVQTSLDRLCSLLDDADKTVAEARTSVASARQTLSDLSQS 240 Query: 92 ------DMVGPLVILLEGKTDNNKFPI----NAGMLRDSYESFVTFANMTDEGQYLFSGI 141 + L L + ++D N + + AN +G Sbjct: 241 SGKVAGSLRDALDGLGQTRSDANALATRLSGALASGSGTLSGLSSQANYDIGKA---AGT 297 Query: 142 NSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLE 201 + S A + Q +Q + + L+ VS + I+ + Sbjct: 298 IGFAQGKVDSSIASSRAALAEAQQVQQQISDVRHELVDNVLPFVSD---PALAARIQDVA 354 Query: 202 DKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNL 261 D + + SD R+ +G+ I + + + L Sbjct: 355 AALDDVDGLLSKLR--SDQG--SRLDRAQGVSDGIKAGSSAIEGLSGSVDGAIQDGAATL 410 Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGIS 294 + A++ L L + L L S Sbjct: 411 SS-AQSTLLTTTLPQMSGALDDFAGAGERLASS 442 >gi|227820866|ref|YP_002824836.1| putative flagellin B [Sinorhizobium fredii NGR234] gi|227339865|gb|ACP24083.1| putative flagellin B [Sinorhizobium fredii NGR234] Length = 306 Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 7/124 (5%) Query: 233 DVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVL-TKKMLSTVQQGLSGIIEQRAVL 291 D + + +L A +LS V LS + A L Sbjct: 178 DDGTGALDTATGILGTAGASAGGYDVYSLDISALATADMNDVLSDVDDALSAMTSAAAEL 237 Query: 292 GISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 G I + F+ ++ ID+ + + + + + +L L + +++ +Q L Sbjct: 238 GSISMRIGLQEDFVAKLSDSIDSGVGRLVDADMNEESTRLKALQTQQQLA------VQSL 291 Query: 352 SILN 355 SI N Sbjct: 292 SIAN 295 >gi|295407184|ref|ZP_06816984.1| extracellular matrix-binding protein ebh [Staphylococcus aureus A8819] gi|294967897|gb|EFG43926.1| extracellular matrix-binding protein ebh [Staphylococcus aureus A8819] Length = 8911 Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 110/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++S++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNSVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GTNKDKQAVEQAIQSVTSTENALNGDANLQCAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ L A + Q +D + A + +NA D +K I D + I Sbjct: 6513 TQAIDNLTQLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIGDHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V + + Sbjct: 6572 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETSLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|262283901|gb|ACY40760.1| FlaG [Rhizobium leguminosarum bv. viciae] Length = 311 Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 112/352 (31%), Gaps = 54/352 (15%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T++ + +N + +G D A + + ++ Sbjct: 2 TSILTNNAAMAALQTLRGVNDSLKDTQGRVSSGYRVDKAADNAAYWSIATTMRSDNMALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ + + S +V D+ +V E D K L++ S Sbjct: 62 AVSDALGLGAAKVDTAYSAMDSALDVVSDIKAKIVAATEKGVDKTKIQQELDQLQEQLLS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A+ FSG N + S K + Sbjct: 122 IAQSAS--------FSGEN--------WVAGASGTKSVVSSFV----------------R 149 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + S+ + +MTD++ + S N+ + + T I+ S+ + Sbjct: 150 DGSNAVSVKMTDYVLD----------------SGSLGNVLFGMTSTGAIETSSGIIGTAF 193 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 VI + G L+ V+ L + + LG I + Sbjct: 194 NGTYGSTVIVMASIYDLDITGFTQGQLDAALTGVELVLGAMTAAGSALGSISTRIQLQET 253 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ ++ ID+ + + + + ++LS L + +++ +Q LSI N Sbjct: 254 FVSGLHDSIDSGVGRLVDADMEEESSKLSALQTQQQLA------IQSLSIAN 299 >gi|257795509|ref|ZP_05644488.1| surface anchored protein [Staphylococcus aureus A9781] gi|257789481|gb|EEV27821.1| surface anchored protein [Staphylococcus aureus A9781] Length = 8695 Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 110/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++S++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNSVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GTNKDKQAVEQAIQSVTSTENALNGDANLQCAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ L A + Q +D + A + +NA D +K I D + I Sbjct: 6513 TQAIDNLTQLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIGDHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V + + Sbjct: 6572 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETSLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|306823822|ref|ZP_07457196.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679] gi|309802424|ref|ZP_07696531.1| YhgE/Pip C-terminal domain protein [Bifidobacterium dentium JCVIHMP022] gi|304552820|gb|EFM40733.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679] gi|308221024|gb|EFO77329.1| YhgE/Pip C-terminal domain protein [Bifidobacterium dentium JCVIHMP022] Length = 880 Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 91/285 (31%), Gaps = 45/285 (15%) Query: 76 LSTSQAHLSSMQKIVQDMVGPLVILLEGKTD--------NNKFPINAGMLRDSYESFVTF 127 + ++A L+ +Q L TD ++ + T Sbjct: 227 IQAARAALNDVQTAATSAGKGLSGTANLITDTQTRINTFSSTASASLDQGSALLSQLSTQ 286 Query: 128 ANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSS 187 N + + S NGY S +Q +N+K L + Q +++S+ Sbjct: 287 TNTSVNT------VTSGLAAANGY--AGSAIGT-----MQKVNSDNAKVLDSLQKIDISN 333 Query: 188 MNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM 247 ++ + + + + D S + AN ++ + N + +S N Sbjct: 334 VSPELNKQYQQIISDLQSRNRQSANTLNDLNQLNTDTKNTVAGTTKLSNQFN-------- 385 Query: 248 FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQN 307 + + N ARN + L + GLS + L + + + Q Sbjct: 386 -----TSTQSTLNSATDARNAINSSALPQLNSGLSSLATTAGTLSGT---VTSQNFLTQQ 437 Query: 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLS 352 ++++D V + L +++ I KL +LS Sbjct: 438 TSSVLDQ----LERV-SADTRSMLKDTDEQLQT---IENKLSQLS 474 >gi|170734366|ref|YP_001766313.1| flagellar hook-associated protein FlgL [Burkholderia cenocepacia MC0-3] gi|169817608|gb|ACA92191.1| flagellar hook-associated protein 3 [Burkholderia cenocepacia MC0-3] Length = 411 Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 68/185 (36%), Gaps = 3/185 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ ++ + +L++++ +G S ++ +++ Sbjct: 3 ISTAQFYQMNVAQMSDQQAQLSQLYQQISSGVSLATPADNPLGAAQAVQLSMTSATLSQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + + L L S+ ++ + ++ +G ++ + L+ + + Sbjct: 63 ASNQNAALSSLQKEDQTLISVNNLLNSIHTVVIQAGDGSLSDSDRSALSTQLQGYRDQLL 122 Query: 126 TFANMTDE-GQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 T AN TD G YLF+G S+ P + S D + +++S+ G + Sbjct: 123 TLANSTDGSGNYLFAGFQSATAPFSN--APGGGVAYSGDTGSRQVQIADTRSIAQGDNGA 180 Query: 185 VSSMN 189 ++ Sbjct: 181 NVFLS 185 >gi|326383634|ref|ZP_08205320.1| hypothetical protein SCNU_11885 [Gordonia neofelifaecis NRRL B-59395] gi|326197718|gb|EGD54906.1| hypothetical protein SCNU_11885 [Gordonia neofelifaecis NRRL B-59395] Length = 669 Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 77/267 (28%), Gaps = 21/267 (7%) Query: 71 LVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA-GMLRDSYESFVTFAN 129 V + L ++K L ++ + + + + A Sbjct: 167 AVDQVLVGLTTAGDGIKKAADGSAQLADGLHTANDGAHELASGSHELATNMVTARDGSAQ 226 Query: 130 MTDEGQYLFSGINSSEKPLNGY--FTKDSLAKKSFDQMLQGFLEENSKSLL-----AGQH 182 + D L SGIN++ PL + S K S L + +L AG Sbjct: 227 LADGTAQLASGINAATAPLTSLLNSVQSSGIKPSQYAGDAARLSSDLSGVLNVIGAAGAG 286 Query: 183 LEVSSMNAQQMTDFIKQLEDK----FSDDEYWANNW--SNASDHNIKYRIKD----TEGI 232 + Q+ ++ D + N+ + D + R+ D +E + Sbjct: 287 QSQAEKTVSQVIAGLRSSPDPNMRALAGALAPVQNFLRTQGVDPSTTARVNDLAKQSETL 346 Query: 233 DVSANVNMRGIRD-IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVL 291 +R + + G + L DGA + T + GL + + L Sbjct: 347 SAQLGDKNSPLRSTLTMLESGGLQDKVTQLRDGAGQLETGAA--ALHSGLIQLTDGSEQL 404 Query: 292 GISEKNINEERVFLQNKNNIIDTYISK 318 + + L + + + Sbjct: 405 ATGAGQLADGTTQLSAGADELAAGLDD 431 >gi|291544314|emb|CBL17423.1| chromosome segregation protein SMC, common bacterial type [Ruminococcus sp. 18P13] Length = 1188 Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 28/221 (12%), Positives = 70/221 (31%), Gaps = 22/221 (9%) Query: 152 FTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQM--TDFIKQLEDKFSDDEY 209 F + + D +G + + ++ +++ A++ I L+ + + Sbjct: 601 FVALAAELAACDAKYEGIFRSLLGRIAIAEDIDCATVIAKRFGYKFRIVTLDGQVINAGG 660 Query: 210 WANNWSNASDHNIKYRIKDTEGIDV---SANVNMRGIRDIMFVAVIGTEFLS-------K 259 S A + R + + + + G R T+ L Sbjct: 661 SFTGGSAAHSSGVITRKNELDTLGTEIEALTAEQEGQRAAGERLKAETDKLRFDLDSTRD 720 Query: 260 NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKS 319 L+ V+ T +Q L+ Q+A ++ + + + L + ++ Sbjct: 721 ALSQAQTEVIRLTADRTAKQALAESARQQAAT--QQERVEQAKQSLARQEQLLAEATRAL 778 Query: 320 IGVEQHTAHAQLSTLINK-------IEMSYMITTKLQKLSI 353 V+Q A + L + + ++ +L KL + Sbjct: 779 EQVDQSIARQE-QALSAQQDLRSGLQQAREALSAQLAKLKL 818 >gi|325291932|ref|YP_004277796.1| Flagellin A protein [Agrobacterium sp. H13-3] gi|10281322|gb|AAG14364.1| flagellin A [Rhizobium lupini] gi|325059785|gb|ADY63476.1| Flagellin A protein [Agrobacterium sp. H13-3] Length = 410 Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Query: 274 LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLST 333 L+ V++ L+ + A LG ++ I+ + F + + I + + + + +L Sbjct: 324 LTGVEKALTSLTSAGAELGSIKQRIDLQVDFASKLGDALAKGIGRLVDADMNEESTKLKA 383 Query: 334 LINKIEMSYMITTKLQKLSILN 355 L + +++ +Q LSI N Sbjct: 384 LQTQQQLA------IQSLSIAN 399 >gi|320140394|gb|EFW32250.1| signal peptide, YSIRK family [Staphylococcus aureus subsp. aureus MRSA131] Length = 9758 Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 +++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6513 IQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 S N + ++ + V +G+ Sbjct: 6572 ASGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|254931223|ref|ZP_05264582.1| cell wall surface anchor family protein [Listeria monocytogenes HPB2262] gi|293582771|gb|EFF94803.1| cell wall surface anchor family protein [Listeria monocytogenes HPB2262] Length = 2027 Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 82/294 (27%), Gaps = 37/294 (12%) Query: 50 TSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIV----QDMVGPLVILLEGKT 105 L + + NS RL + Q + + I Q V PL + + Sbjct: 1346 AQALTLAKTAAFEEVKDGVNSSAEDRLDSVQVSQTQLDAIKNGSNQGSVYPLTYSITKDS 1405 Query: 106 DNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQM 165 I + +D +T N D Y+ F + + + D Sbjct: 1406 KTVSVTIQVTVAKD-----LTAVNAHDSTIYI-----GDAWEEKDNFDSATNKEGATDIA 1455 Query: 166 LQGFLEENSKSLLAGQHLEVS----------SMNAQQMTDFIKQLEDKFSDDEYWA--NN 213 S + V+ ++ + + + + + W +N Sbjct: 1456 FSDVTVTGSVNTAVAGVYPVTYTYNGVSKKINVTVKAIKTAVNAHDSTIYTGDTWNARDN 1515 Query: 214 WSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKM 273 + +A D + + S N N G I + ++ ++ + + + Sbjct: 1516 FDSALDKDGNSVAFADVTVTGSVNTNETGTNTITYSYDGVSQTITVTVVENKEGISAHDS 1575 Query: 274 LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 + + ++ N + N ++ D +++ V+ A Sbjct: 1576 TIYAGESWN-----------AKDNFDSAFDKDGNAVDLEDVTVTEKPTVDTTKA 1618 >gi|110667432|ref|YP_657243.1| ABC-type phosphate transport system, substrate binding protein [Haloquadratum walsbyi DSM 16790] gi|109625179|emb|CAJ51599.1| ABC-type phosphate transport system, substrate binding protein [Haloquadratum walsbyi DSM 16790] Length = 390 Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 37/127 (29%), Gaps = 11/127 (8%) Query: 158 AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNA 217 +K+ FD + E + + G+ S + F+ + D + N A Sbjct: 198 SKEIFDAGVTQITGEQVRGIYQGEITNWSEIGGPDQEIFVIGRAEGSGTDTSFRLNMLGA 257 Query: 218 SDHNIK---YRIKDTEGIDVSANVNMRGIRDIMFVAV------IGTEFLSKNL--TDGAR 266 +D ++ R + + + N I + + +F A Sbjct: 258 ADASMSGVSSRFGQNQQVAEAVANNEGAIAYMALAFTSDQVPPVAIDFDGTVYKPDKDAE 317 Query: 267 NVLTKKM 273 N + Sbjct: 318 NTIFDSA 324 >gi|254230132|ref|ZP_04923527.1| flagellin [Vibrio sp. Ex25] gi|262394931|ref|YP_003286785.1| flagellin protein FlaC [Vibrio sp. Ex25] gi|151937325|gb|EDN56188.1| flagellin [Vibrio sp. Ex25] gi|262338525|gb|ACY52320.1| flagellin protein FlaC [Vibrio sp. Ex25] Length = 384 Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 53/384 (13%), Positives = 113/384 (29%), Gaps = 52/384 (13%) Query: 10 SIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSN 69 ++ N+ + K +E+ T R++S + K+ A SN Sbjct: 2 AVTVSTNVSAMTAQRYLNKATDELNTSM---------ERLSSGHKINSAKDDAAGLQISN 52 Query: 70 SLVTKR-------------LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGM 116 L + +S +Q +M + M + ++ N + Sbjct: 53 RLTAQSRGLDVAMRNANDGISIAQTAEGAMNEATSVMQRMRDLAIQSSNGTNSPAERQAI 112 Query: 117 LRDSYESFVTFAN-----MTDEGQYL----FS------GINSSEKPL-------NGYFTK 154 +S + + N + G+ L F G +S E + Sbjct: 113 NEESM-ALIDELNRIAETTSFGGRRLLNGSFGEAAFQIGASSGEAMIMGLTSIRADDTRM 171 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNW 214 + S + + + + +KS L + + D + K DD + Sbjct: 172 GGVTFLSENGKDKDWGVDPAKSDLKITLPGMGEDEDGNVDDLEININAKAGDDIEELATY 231 Query: 215 SNASDHNIKYRIKDTEGIDVSAN-VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKK- 272 N I + + + V N++G I + L +++ Sbjct: 232 INGQSDMINASVSEDGKLQVFVAHPNVQGEISISGGLASELGLSDEPLRTSVQDIDMTTV 291 Query: 273 -----MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 +S + L + QRA LG + ++ L N +D S+ + Sbjct: 292 QGSQNAISVLDSALKYVDSQRADLGAKQNRLSHSINNLANIQENVDASNSRIKDTDFAKE 351 Query: 328 HAQLSTLINKIEMSYMITTKLQKL 351 Q++ + I + ++L Sbjct: 352 TTQMTKAQILQQAGTSILAQAKQL 375 >gi|294848398|ref|ZP_06789144.1| extracellular matrix-binding protein ebh [Staphylococcus aureus A9754] gi|294824424|gb|EFG40847.1| extracellular matrix-binding protein ebh [Staphylococcus aureus A9754] Length = 9692 Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 +++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6513 IQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 S N + ++ + V +G+ Sbjct: 6572 ASGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|254780531|ref|YP_003064944.1| flagellin domain-containing protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040208|gb|ACT57004.1| flagellin domain-containing protein [Candidatus Liberibacter asiaticus str. psy62] Length = 452 Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 50/114 (43%), Gaps = 8/114 (7%) Query: 244 RDIMFVAVIGTEFLSKNLTDGARN--VLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 ++I + T ++++ A N + ++M+S + + +G I+ + Sbjct: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F++ + ++ + + + + + +LS L + +++ +Q LSI+N Sbjct: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA------VQALSIVN 440 >gi|189192791|ref|XP_001932734.1| hypothetical protein PTRG_02401 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187978298|gb|EDU44924.1| hypothetical protein PTRG_02401 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1056 Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 34/87 (39%) Query: 143 SSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLED 202 + P Y + S A D +QG+ N+ + Q + + + F L+D Sbjct: 798 TQTSPSAAYTSSTSDADARPDTEMQGYGTGNTANFFGQQQPQQQQQRRRPVPRFDMNLKD 857 Query: 203 KFSDDEYWANNWSNASDHNIKYRIKDT 229 FSDDE ++S S+ R T Sbjct: 858 LFSDDETDKRSFSRVSNQVNAMRPPPT 884 >gi|159184361|ref|NP_353571.2| hypothetical protein Atu0543 [Agrobacterium tumefaciens str. C58] gi|1865674|emb|CAA65301.1| flaB [Agrobacterium tumefaciens str. C58] gi|2459722|gb|AAB71798.1| FlaB [Agrobacterium tumefaciens] gi|159139676|gb|AAK86356.2| flaB [Agrobacterium tumefaciens str. C58] Length = 320 Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 100/354 (28%), Gaps = 45/354 (12%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 T+ I+ + + L + + +G A + + Sbjct: 1 MTSIITNVAAMSALQTLRSIGQ-NMESTQARVSSGLRVGDASDNAAYWSIATTMRSDNMA 59 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 ++ + L ++ T+ A +SS +V+++ LV E D K G L+ Sbjct: 60 LSSVSDALGLGAAKVDTASAGMSSAIDVVKEIKAKLVTATEEGVDRTKVQEEIGQLQKQL 119 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 S A + G+ G+++ + ++ GF+ + ++ Sbjct: 120 ASISQGA--SFYGENWLVGVST--------LGAATPGTDPDKSVVAGFVRASGGAVSVTT 169 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMR 241 A F + + I T G + Sbjct: 170 TKYALDNTATGNVLFGSV----------------DGTGTPDASGILGTVGTFTTVAAQS- 212 Query: 242 GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEE 301 R + L+ V+ L + A LG I + Sbjct: 213 -----------VYTLDITQYAAADRATNMAEALTLVENSLKAMTSAAAKLGSLSMRIGLQ 261 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F ++ ++ I + + + + +L L + ++ +Q LSI N Sbjct: 262 EDFASKLSDSVEKGIGRLVDADMNEESTRLKALQTQQQLG------VQALSIAN 309 >gi|49483625|ref|YP_040849.1| hypothetical protein SAR1447 [Staphylococcus aureus subsp. aureus MRSA252] gi|81651134|sp|Q6GGX3|EBH_STAAR RecName: Full=Extracellular matrix-binding protein ebh; AltName: Full=ECM-binding protein homolog; Flags: Precursor gi|49241754|emb|CAG40444.1| very large surface anchored protein [Staphylococcus aureus subsp. aureus MRSA252] Length = 10746 Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6332 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6391 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6392 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 6451 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6452 TNKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6508 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6509 TQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 6567 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V +G+ Sbjct: 6568 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6626 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6627 LATAKQQAKDALRQMTHLSDAQKQSITVQIDNATQVTGVQSVKDNATNLDNAMNQLRNSI 6686 Query: 343 M 343 Sbjct: 6687 A 6687 >gi|308161272|gb|EFO63726.1| Syntaxin-like protein 1 [Giardia lamblia P15] Length = 293 Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 46/163 (28%), Gaps = 16/163 (9%) Query: 194 TDFIKQLEDKFSDDEYWANNWSNASDHNIKYRI-----KDTEGIDVSANVNMRGIRDIMF 248 DFI + D + S + + I E I+ + I + Sbjct: 6 DDFIDEPNDSQNLLPAEKPATSKTASGSGASPIPKEILSAYEVINGAIKRVDDAIISLSE 65 Query: 249 VAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNK 308 ++ +N + K+ + L + E LG + + + + Sbjct: 66 ATRKADSINTEPELKEFKNTINSKVAEIKGKMLREVTESIKDLGKQQAALQRKEALDDAQ 125 Query: 309 NNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 + II ++ +++ IT KL L Sbjct: 126 SVIIAGKKRSYQ--------QTVTNKETQLD---SITKKLAHL 157 >gi|238799423|ref|ZP_04642852.1| Flagellar hook-associated protein 3 [Yersinia mollaretii ATCC 43969] gi|238716727|gb|EEQ08614.1| Flagellar hook-associated protein 3 [Yersinia mollaretii ATCC 43969] Length = 320 Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 36/333 (10%), Positives = 102/333 (30%), Gaps = 31/333 (9%) Query: 22 LNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQA 81 ++ +++ TG+ + + Q ++ ++ + S LS Sbjct: 13 AQSLWMQSGQQLSTGKRVVNPSDDPMAASQAVMVSQSQSENSQYTLARSFARNELSQETK 72 Query: 82 HLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFAN-MTDEGQYLFSG 140 L + +Q + ++ ++ A L+ + + AN G+Y F+ Sbjct: 73 TLEQVTSTIQSIQSIIISAKSDILSDDDRASYATQLQGLKDQLLNQANSTNGSGRYTFAA 132 Query: 141 INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQL 200 S + P ++ + D ++ ++ + + + V + Sbjct: 133 FKSDKPPFV-VSATGAVTYQGGDVAIEQKVDASREMTIGHTGSSVFLALTSNAK---PEP 188 Query: 201 EDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKN 260 +D + N N D +K + +++ + Sbjct: 189 DDAAGNPVAAEANVFNTIDTVLKS-------LKTPLAGATDAVKEQAEAEM--------- 232 Query: 261 LTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 K + + L+ ++ +A +G + ++ ++ ++ + Sbjct: 233 ----------DKGIRGMANSLNNVLSVQAEVGTQLQELDNLDSLGSDRTLSNKQRLTDLV 282 Query: 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 V+ A + ++ SY T +Q LS+ Sbjct: 283 DVDYTAAISSYVMQQAALQASYTTFTNMQGLSL 315 >gi|218134725|ref|ZP_03463529.1| hypothetical protein BACPEC_02628 [Bacteroides pectinophilus ATCC 43243] gi|217990110|gb|EEC56121.1| hypothetical protein BACPEC_02628 [Bacteroides pectinophilus ATCC 43243] Length = 524 Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 30/78 (38%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + + + + +S + R+ LG E I + + + +S+ I + Sbjct: 433 AGRSIDKIDEAVSKVSSIRSTLGSYENRIEHTQNNIDTSTENMTAALSRMIDTDMAEEMT 492 Query: 330 QLSTLINKIEMSYMITTK 347 + ++ ++ + I ++ Sbjct: 493 EYTSQNVLVQAATSILSQ 510 >gi|86358414|ref|YP_470306.1| flagellin C protein [Rhizobium etli CFN 42] gi|86282516|gb|ABC91579.1| flagellin C protein [Rhizobium etli CFN 42] Length = 332 Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 38/315 (12%), Positives = 94/315 (29%), Gaps = 27/315 (8%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 +++N++ + TG + + I+ + + + T Sbjct: 16 LRDINRNMTVTQNHITTGMRVAKAADNAVYWSIATTARTDNKAISAIQDALGMAAATMGT 75 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 + + ++ +V ++ LV E D NK L++ S A + + Sbjct: 76 AYTGVQNVIDVVSEIKAKLVAATENGVDKNKINEELKQLQEQLRSVSESATFNSDNWVI- 134 Query: 139 SGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 +N+ P S + S + G L + + G + + ++ Sbjct: 135 --LNNDATPTQPRQIPASFIRNSDGTVSIGMLSYHIDNTPVG-------ATSSKDARYLI 185 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLS 258 S + + A+ + + + + N + Sbjct: 186 DDRATGSGEYGVLTSAYFAT------ELGTAQNYVLMTSKNGT-----------TAGQVV 228 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 +L+ +M+S V L+ + + G EK I + F ++ I I + Sbjct: 229 ISLSAATTQGQIGEMISVVDAALTQLTTVGSAFGALEKRIELQNDFATQLHDNITAGIGR 288 Query: 319 SIGVEQHTAHAQLST 333 + + ++L Sbjct: 289 LVDADMEEESSRLRA 303 >gi|282904016|ref|ZP_06311904.1| cell wall associated fibronectin-binding protein [Staphylococcus aureus subsp. aureus C160] gi|282595634|gb|EFC00598.1| cell wall associated fibronectin-binding protein [Staphylococcus aureus subsp. aureus C160] Length = 10468 Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6337 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6396 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6397 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 6456 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6457 TNKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6513 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6514 TQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 6572 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V +G+ Sbjct: 6573 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6631 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6632 LATAKQQAKDALRQMTHLSDAQKQSITVQIDNATQVTGVQSVKDNATNLDNAMNQLRNSI 6691 Query: 343 M 343 Sbjct: 6692 A 6692 >gi|254512850|ref|ZP_05124916.1| type I secretion membrane fusion protein, HlyD family [Rhodobacteraceae bacterium KLH11] gi|221532849|gb|EEE35844.1| type I secretion membrane fusion protein, HlyD family [Rhodobacteraceae bacterium KLH11] Length = 435 Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 52/142 (36%), Gaps = 7/142 (4%) Query: 216 NASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLS 275 NA + +I V + G + + I + + LTD + L ++ L+ Sbjct: 150 NARLETLTQQIDQLGKQKVQIGNEIEGTQAQLAALNIQVDLIRTELTD--QQGLLERGLT 207 Query: 276 TVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLI 335 + +S + + A L + L + + + I + + A QL + Sbjct: 208 QASR-VSALQREEANLTGQIGRLESTIARLTGQISTTEIQIVELQATRREEAITQLRDVQ 266 Query: 336 NKI----EMSYMITTKLQKLSI 353 +++ E +T +L +L I Sbjct: 267 SRVVELAERRLSLTERLSRLDI 288 >gi|228907372|ref|ZP_04071230.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis IBL 200] gi|228852233|gb|EEM97029.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis IBL 200] Length = 287 Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 8/152 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQ----SSDYGLQLGARVTSILEWEQEKNH 61 +ST +LN ++ +G+ S+ L + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + S +++T+ +T Q L S+ + Q V L + + + Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQAL----SEQNGEKELKAIGAEIDQIL 118 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 + V AN ++G+Y+F G ++ P T Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAENPPFTEDGT 150 >gi|148508383|gb|ABQ76164.1| halobacterial transducer-like protein [uncultured haloarchaeon] Length = 398 Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 37/127 (29%), Gaps = 11/127 (8%) Query: 158 AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNA 217 +K+ FD + E + + G+ S + F+ + D + N A Sbjct: 206 SKEIFDAGVTQITGEQVRGIYQGEITNWSEIGGPDQEIFVIGRAEGSGTDTSFRLNMLGA 265 Query: 218 SDHNIK---YRIKDTEGIDVSANVNMRGIRDIMFVAV------IGTEFLSKNL--TDGAR 266 +D ++ R + + + N I + + +F A Sbjct: 266 ADASMSGVSSRFGQNQQVAEAVANNEGAIAYMALAFTSDQVPPVAIDFDGTVYKPDKDAE 325 Query: 267 NVLTKKM 273 N + Sbjct: 326 NTIFDSA 332 >gi|228984823|ref|ZP_04144995.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229155310|ref|ZP_04283421.1| Flagellar hook-associated protein 3 [Bacillus cereus ATCC 4342] gi|228628235|gb|EEK84951.1| Flagellar hook-associated protein 3 [Bacillus cereus ATCC 4342] gi|228775021|gb|EEM23415.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 287 Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 49/148 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + V L G + + + V Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGTNSEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 123 YLANTKEQGRYIFGGDSTEKLPFTEDGT 150 >gi|218886715|ref|YP_002436036.1| flagellar hook-associated protein 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757669|gb|ACL08568.1| flagellar hook-associated protein 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 497 Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 33/88 (37%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + L + G + ++ + +G E + + + +S + + Sbjct: 410 IAESLKAITAGQAKMLSAASNIGAREVRLEHIQTANTLLASTAKNAVSNVVDADTTELAT 469 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 QLS L E + + KLS+L+YL Sbjct: 470 QLSKLTTVYEAVLSTQSAVMKLSLLDYL 497 Score = 36.2 bits (82), Expect = 7.0, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 44/139 (31%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST+ + L + +L +M T Q + L N + + Sbjct: 3 ISTNMTYSNSLKYMTRLQSNINRLTIQMATQQRINCPSDDPYGTEVALTNSTLINQLTQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS + L + ++ G + A R YE V Sbjct: 63 QSNVDTAKGWLSLADDTLGDASTALASLIELAEQAATGTLTDANRLAIAEEARGLYEQLV 122 Query: 126 TFANMTDEGQYLFSGINSS 144 T A+ GQ +F+G +S Sbjct: 123 TCASTRYNGQSIFAGRDSG 141 >gi|317152828|ref|YP_004120876.1| flagellar hook-associated protein 3 [Desulfovibrio aespoeensis Aspo-2] gi|316943079|gb|ADU62130.1| flagellar hook-associated protein 3 [Desulfovibrio aespoeensis Aspo-2] Length = 397 Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 53/399 (13%), Positives = 113/399 (28%), Gaps = 51/399 (12%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 IST IF + D KL+ + + + + +++E ++ Sbjct: 3 ISTPQIFSQSLNQINSSLIDVAKLNSINSSQKKLNSPSDDPFGMGTVIELRGYDKTLSGY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 +++ + LS + L +I+ + + A + +S + Sbjct: 63 VNNCKTAAESLSLADDILLQASEIITAAREQAEQAASETYTAAQLQMMADEMASYLDSLM 122 Query: 126 TFANMTDEGQYLFSGINSSEKP----LNGYFTKDSLAKKSF------------------D 163 T AN +F G + L T DSL+ SF D Sbjct: 123 TMANTQMGTDSIFGGDSLDSTAYEMGLGVTMTNDSLSNASFVSIEGELDSAVVSVRLGTD 182 Query: 164 QMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA------------ 211 ++ E S S G+ +++ A + + + + Sbjct: 183 GVIGTDEIEYSYSTDGGETWTSATLAAGDTVLDLGSCQVELAAGTAVTEADGDGEGTEFI 242 Query: 212 ---NNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNV 268 SD + I + + + V + G + NL + N Sbjct: 243 VRKAAVYTGSDTAMTVAISGSSTVAM-TTVGSSVFGGVDQS---GAGYGEPNLFETISNC 298 Query: 269 L----------TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 + L ++ + A +G E + + I IS+ Sbjct: 299 IAFMETGNHAGVAACLDELRSAQESLEAANANIGARENKVTYTSEAISQVRTITGNSISR 358 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + +L E + + ++S+L+Y+ Sbjct: 359 VEDADAAQILVELEQANYVYEAVLTSSASIMRMSLLDYI 397 >gi|218236044|ref|YP_002366424.1| flagellar hook-associated protein FlgL [Bacillus cereus B4264] gi|218164001|gb|ACK63993.1| putative flagellar hook-associated protein FlgL [Bacillus cereus B4264] Length = 287 Score = 38.1 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 8/152 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQ----SSDYGLQLGARVTSILEWEQEKNH 61 +ST +LN ++ +G+ S+ L + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + S +++T+ +T Q L S+ + Q V L + + + Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQAL----SEQNGEKELKAIGAEIDQIL 118 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 + V AN ++G+Y+F G ++ + P T Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKPPFTEDGT 150 >gi|86356320|ref|YP_468212.1| flagellin C protein [Rhizobium etli CFN 42] gi|86280422|gb|ABC89485.1| flagellin C protein [Rhizobium etli CFN 42] Length = 301 Score = 38.1 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + L+ V+ L + A LG I+ + F+ ++ ID+ I + + + + Sbjct: 211 IQSALTNVESALKSMTSAGAALGSLSSRIDSQEDFVSALSDSIDSGIGRLVDADMEEESS 270 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +LS L + +++ +Q LSI N Sbjct: 271 KLSALQTQQQLA------IQSLSIAN 290 >gi|190890372|ref|YP_001976914.1| flagellin C protein [Rhizobium etli CIAT 652] gi|190695651|gb|ACE89736.1| flagellin C protein [Rhizobium etli CIAT 652] Length = 301 Score = 38.1 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + L+ V+ L + A LG K I+ + F+ ++ ID+ + + + + + Sbjct: 211 IQTALTNVEAALKSMTSAGAALGSLSKRIDNQEDFVSALSDSIDSGVGRLVDADMEEESS 270 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +LS L + +++ +Q LSI N Sbjct: 271 KLSALQTQQQLA------IQSLSIAN 290 >gi|229017027|ref|ZP_04173947.1| Flagellar hook-associated protein 3 [Bacillus cereus AH1273] gi|228744298|gb|EEL94380.1| Flagellar hook-associated protein 3 [Bacillus cereus AH1273] Length = 249 Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 41/105 (39%) Query: 49 VTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN 108 + + +I + + LS ++ L + K + + + + G N Sbjct: 8 ASKSFAIQHSLANIEQMQKDIADSRNVLSQTENTLQGIVKSLTRVEQLTLQAVNGTNSPN 67 Query: 109 KFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 + +A + + V AN ++G+Y+F G ++S+ P T Sbjct: 68 ELKASAAEIDQLLKQVVYLANKQEQGRYIFGGDSASKPPFAEDGT 112 >gi|125978184|ref|XP_001353125.1| GA17375 [Drosophila pseudoobscura pseudoobscura] gi|195173420|ref|XP_002027489.1| GL10310 [Drosophila persimilis] gi|54641876|gb|EAL30626.1| GA17375 [Drosophila pseudoobscura pseudoobscura] gi|194114390|gb|EDW36433.1| GL10310 [Drosophila persimilis] Length = 1637 Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 38/293 (12%), Positives = 90/293 (30%), Gaps = 29/293 (9%) Query: 59 KNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQ-DMVGPLVILLEGKTDNNKFPINAGML 117 I E +SN V + + + + +L KT ++K Sbjct: 1325 LKQINELSNSNGEVFADFEEERTLAEVLLERADKQKQDDIELLNRAKTAHDKATKAVEQG 1384 Query: 118 RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSL 177 ++ + N +G S + + A ++ + S Sbjct: 1385 DNTLKEANNTYNT-------LAGFQSDVQ---RSSESAAQALQTVPNIELEIQNAESLIG 1434 Query: 178 LAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSAN 237 AG+ L+ ++ NA + ++ + K+++ AS R K E + N Sbjct: 1435 QAGEALDGANKNANEAKKNAQEAQKKYAE---------QASKDAELIRRKANETKVAARN 1485 Query: 238 VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297 + + V + + + + L V Q +A ++K Sbjct: 1486 LRDEADQLNHRVKLTEMDIFKLEESSTKDDNLVDDAKRKVGQA-------KADTQEAQKQ 1538 Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 I + L + ++ + + +L+ + +I +T +++K Sbjct: 1539 IEKANAELTAIKDELEN-LKDINTADLDKLENRLTIVEGEINRV-NLTGRIEK 1589 >gi|260574411|ref|ZP_05842415.1| flagellin domain protein [Rhodobacter sp. SW2] gi|259023307|gb|EEW26599.1| flagellin domain protein [Rhodobacter sp. SW2] Length = 400 Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 60/374 (16%), Positives = 110/374 (29%), Gaps = 52/374 (13%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 + I T++ K +N + K E+ TG+S A E + Sbjct: 2 SSILTNTSAMVALQTMKGINANMNKTQAEISTGKSVASAKDNAAVWAISKVMESDVQGFK 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 S +L + ++ ++ ++ ++ + G +V E D K + L ES Sbjct: 62 GISDSLALGSSTVAVARKASETVTDLLTQIKGKIVAAQEANVDRGKIDADVKALTKQIES 121 Query: 124 FVTFANMTDEGQYLFSGINSSE------------------------------KPLNGYFT 153 V A G L +G S+ L Sbjct: 122 VVGAA--QFNGLNLVNGSKSTVDILASLDRSGAGVTASNITVTAQNLSTNAGAALTNGTL 179 Query: 154 KDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV--SSMNAQQMTDFIK------------- 198 + D L GF + + LA + + A D I Sbjct: 180 SAASVVTGTDVTLDGFTFQETGGALASNDPLAVPTDLTALLAGDSISLKIGSVEGKYVVQ 239 Query: 199 --QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEF 256 D + + + SD + I + V+ N N+ DI A GT Sbjct: 240 QGDNADSLISGLKNSLSQNGLSDTDFTLSITGAGELTVANNTNVAA--DISVAASRGTGA 297 Query: 257 LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYI 316 L+ L L+ ++ + G I+ + G +K I + F+ ++ + I Sbjct: 298 LA-GLNSIDVQTNAAGALTAIEDMVKGAIDAASSFGSVQKRIEIQSSFVSELSDSLKAGI 356 Query: 317 SKSIGVEQHTAHAQ 330 + A+ Sbjct: 357 GSMVDANMEETSAR 370 >gi|209550137|ref|YP_002282054.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535893|gb|ACI55828.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 332 Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 38/315 (12%), Positives = 98/315 (31%), Gaps = 27/315 (8%) Query: 19 TKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLST 78 +++N++ + TG G + + ++ + + + T Sbjct: 16 LRDINRNMTVTQNHITTGMRVAKAADNGVYWSVATTARTDNKAVSAIQDALGMAAATMGT 75 Query: 79 SQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLF 138 + + ++ +V ++ LV E D NK L++ S A + + Sbjct: 76 AYTGVENVIDVVSEIKAKLVAATEDGIDKNKVNEEIKQLQEQLRSVSESATFNSDNWVI- 134 Query: 139 SGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIK 198 +N+ P S + + + G L + + G + + ++ Sbjct: 135 --LNNDATPTQPRQIPASFIRNADGTVSVGMLSYHIDNTPVG-------ATSSKDARYLI 185 Query: 199 QLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLS 258 S + + A+ + ++ + + N ++ Sbjct: 186 DDRATGSGEYGVLTSAYFAT------ELGASQNYVLMESKNGTTTGQVV----------- 228 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 +L+D +M+S V L+ + + G EK IN + F ++ I + Sbjct: 229 ISLSDATTKGQIGEMISVVDAALTQLTTVGSAFGALEKRINLQNDFASKLHDNNTAGIGR 288 Query: 319 SIGVEQHTAHAQLST 333 + + ++L Sbjct: 289 LVDADMEEESSKLKA 303 >gi|196044977|ref|ZP_03112210.1| putative flagellar hook-associated protein FlgL [Bacillus cereus 03BB108] gi|228926775|ref|ZP_04089843.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|196023979|gb|EDX62653.1| putative flagellar hook-associated protein FlgL [Bacillus cereus 03BB108] gi|228832888|gb|EEM78457.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 287 Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 49/148 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + V L G + + + V Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGTNSEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 123 YLANTKEQGRYIFGGDSAEKPPFTEDGT 150 >gi|58532899|ref|YP_195122.1| Hypothetical-Protein | belonging to T4-LIKE GC: 830 [Synechococcus phage S-PM2] gi|58331366|emb|CAF34152.1| Hypothetical-Protein | belonging to T4-LIKE GC: 830 [Synechococcus phage S-PM2] Length = 3338 Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 81/278 (29%), Gaps = 31/278 (11%) Query: 86 MQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSE 145 + V P + + G + + VT + G LF G + Sbjct: 2052 ITDPGSGYVTPPTLTITGGNPALGAVEAKAVATIASGQVVTVEIIEFNG--LFGGKGYTT 2109 Query: 146 KP-LNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKF 204 +P + + S +L+ L N + + + + + + + L Sbjct: 2110 QPTVTFSQPPGAGTAASGTALLESRLYGNIVNNIKIDDQDA--IESSDVPADVINLSRVI 2167 Query: 205 SDDEYWANNWSNASDHNIKYR------IKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLS 258 + + NW + S + I I T + S N + + + Sbjct: 2168 NTSASLSTNWVSLSSNQIAASDITSGVISSTRLANNSDAANSFTFLRGDQAYALTVQSI- 2226 Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 GA + ++++ QG S+ + + + IID Sbjct: 2227 ----KGAESRYFARLITAASQG-------------SQTLVFSTNSDILRGHAIIDN--ID 2267 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNY 356 I + + + IE+S + L +IL + Sbjct: 2268 GIPEDTTVSSVLTTGGTTTIEISEPLDGNLASGTILEF 2305 >gi|304558599|gb|ADM41263.1| Flagellar hook-associated protein FlgL [Edwardsiella tarda FL6-60] Length = 311 Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 73/210 (34%), Gaps = 14/210 (6%) Query: 156 SLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWS 215 S KS D + S + N + + K F+ +S Sbjct: 99 SSGTKSDDDRAAIATQLESMRDQLLNLANSTDGNGRYIFAGYKSDAAPFTKGAASEVTYS 158 Query: 216 NASDHNIKYRIKDTEGIDVSANVNM-----RGIRDIMFVAVIGTEFLSKNL---TDGARN 267 D + ++ + VS N +G +DI + L L D A+ Sbjct: 159 GG-DKALTQQVDAARTMTVSHTGNQVFQPGKGEQDIFASLQQAIDALKTPLEGKDDAAKK 217 Query: 268 VLTK---KMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI-IDTYISKSIGVE 323 ++ ++ L+ + RA LG ++ N + + ++N I T IS V+ Sbjct: 218 AVSDDLDSANRGLRNSLNNVSRVRAELG-TQLNELDSLDAIGDENAITYKTRISSVQDVD 276 Query: 324 QHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 A + S ++ SY + + +Q +S+ Sbjct: 277 WTQAISDYSFRQVSLQASYKVFSDMQGMSL 306 >gi|254230133|ref|ZP_04923528.1| flagellar hook-associated protein 3 [Vibrio sp. Ex25] gi|262394932|ref|YP_003286786.1| flagellar hook-associated protein FlgL [Vibrio sp. Ex25] gi|151937326|gb|EDN56189.1| flagellar hook-associated protein 3 [Vibrio sp. Ex25] gi|262338526|gb|ACY52321.1| flagellar hook-associated protein FlgL [Vibrio sp. Ex25] Length = 397 Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 11/168 (6%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQLGARVTSILEWEQ 57 T IS+ ++ + + E++ +G+ SD L + EQ Sbjct: 1 MLTRISSFHNYQSVQNDLRRQENKVHHNQEQLASGKKLLKPSDDPLASHYIQNISQQQEQ 60 Query: 58 EKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML 117 + +++ + LV RL + ++++ + + + ++ G L Sbjct: 61 LQQYLSSIV----LVRNRLENHEVNIANAENFADESKRLTMEMINGAFSAEDRQAKKREL 116 Query: 118 RDSYESFVTFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ 164 + +F+ N D G Y+F+G +P Y KD + + D Sbjct: 117 EEIANNFLNLVNSQDESGNYVFAGTKPKSQPF--YRDKDGSVQYAGDD 162 >gi|221140998|ref|ZP_03565491.1| cell wall associated fibronectin-binding protein [Staphylococcus aureus subsp. aureus str. JKD6009] Length = 8712 Score = 37.8 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6336 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6395 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6396 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 6455 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6456 TKKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6512 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 +++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6513 IQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 6571 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 S N + ++ + V +G+ Sbjct: 6572 ASGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6630 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6631 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6690 Query: 343 M 343 Sbjct: 6691 A 6691 >gi|115629210|ref|XP_001178955.1| PREDICTED: similar to CRP-ductin-alpha [Strongylocentrotus purpuratus] gi|115953906|ref|XP_001185705.1| PREDICTED: similar to CRP-ductin-alpha [Strongylocentrotus purpuratus] Length = 982 Score = 37.8 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 40/130 (30%), Gaps = 23/130 (17%) Query: 139 SGINSSEKPLNGYFTKDSLAKKSFDQMLQGFL------EENSKSLLAGQHLEVSSMNAQQ 192 +GI S PL G + S S D +L +++ + + + Sbjct: 793 AGI-SGISPLTGGRREPSALVLS-DAVLGDLSLSLVQYMDDAFGSSSSNASSGTDLFGTW 850 Query: 193 MT-----------DFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDT----EGIDVSAN 237 M + ++ D W +A D + I+D + I + A+ Sbjct: 851 MEGVQPGQNVFAVNLTSSVDANVFVDSCWTTPGPDAQDQDTTSLIQDGCEIDDTIHIGAS 910 Query: 238 VNMRGIRDIM 247 + R I Sbjct: 911 ADDPRFRPIA 920 >gi|241206930|ref|YP_002978026.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860820|gb|ACS58487.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 311 Score = 37.8 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 112/352 (31%), Gaps = 54/352 (15%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T++ + +N + +G + A + + ++ Sbjct: 2 TSILTNNAAMAALQTLRGVNDSLKDTQGRVSSGYRVEKAADNAAYWSIATTMRSDNKALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ + + S +V D+ +V E D K L++ S Sbjct: 62 AVSDALGLGAAKVDTAYSAMDSALDVVSDIKAKIVAATEKGVDKTKIQQELDQLQEQLLS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A+ FSG N + S K + Sbjct: 122 IAQSAS--------FSGEN--------WVAGASGTKSVVSSFV----------------R 149 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + S+ + +MTD++ + S N+ + + T I+ S+ + Sbjct: 150 DGSNAVSVKMTDYVLD----------------SGSLGNVLFGMTSTGAIETSSGIIGTAF 193 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 VI + G L+ V+ L + + LG I + Sbjct: 194 NGTYGSTVIVMASIYDLDITGFTQGQLDAALTGVELVLGAMTAAGSALGSISTRIQLQET 253 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ ++ ID+ + + + + ++LS L + +++ +Q LSI N Sbjct: 254 FVSGLHDSIDSGVGRLVDADMEEESSRLSALQTQQQLA------IQSLSIAN 299 >gi|331220317|ref|XP_003322834.1| hypothetical protein PGTG_04371 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301824|gb|EFP78415.1| hypothetical protein PGTG_04371 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 364 Score = 37.8 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 35/118 (29%), Gaps = 2/118 (1%) Query: 142 NSSEKPLNGYFTKDSLAKKSFDQMLQGFLEE-NSKSLLAGQHLEVSSMNAQQMTDFIKQL 200 + P N ++ S + G + KS + + S + M FI Sbjct: 49 ETFVTPSNNSSSQLSPDLAVPNNSRIGQSTSQDYKSPESATQVNPSHHIPENMESFISIT 108 Query: 201 EDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLS 258 + S + + S S+ + + E + + G+R A F Sbjct: 109 DSSASGERSYTTRVSANSEERLSSHLPQGEEAQLE-SAKNDGLRSPSVNAPSIRTFGD 165 >gi|124268715|ref|YP_001022719.1| hydrolase or acyltransferase-like protein [Methylibium petroleiphilum PM1] gi|124261490|gb|ABM96484.1| hydrolase or acyltransferase-like protein [Methylibium petroleiphilum PM1] Length = 425 Score = 37.8 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 12/85 (14%) Query: 17 ILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLV---- 72 EL D+ +L E+ TG GL LG V L + + + +NS Sbjct: 229 YTMAELADDAERLLAELDTGPVVWIGLSLGGMVGQELALRHPR-RVEALVIANSSAGFDE 287 Query: 73 ------TKRLSTS-QAHLSSMQKIV 90 +R+ Q + ++ Sbjct: 288 AGRNAWQQRIDAVAQGGVDAVADAA 312 >gi|330895344|gb|EGH27682.1| host specificity protein J [Pseudomonas syringae pv. japonica str. M301072PT] Length = 1379 Score = 37.8 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 16/127 (12%), Positives = 36/127 (28%), Gaps = 10/127 (7%) Query: 29 LHEEMVTGQSSDYGLQLGARVTSILEWEQEK-NHIAERLHSNSLVTKRLSTSQAHLSSMQ 87 E + +GA I + + +++A + + +T R+ + A + S Sbjct: 1137 SQNEATARTVTQLTASVGANTGQITDLREVVTSNLASTATAITQLTTRVGDNSAAIQSEA 1196 Query: 88 KIVQDMVGPL----VILLEGKTDNNKFPINAGMLRDSYESFVTFA-----NMTDEGQYLF 138 + G L A V+ + T G+ + Sbjct: 1197 TARSNADGALSSQISTAQATANGATAQAQTASTAVSGLNGKVSALTTIKTSTTVGGRTVM 1256 Query: 139 SGINSSE 145 +G+ Sbjct: 1257 AGLAIGV 1263 >gi|226327735|ref|ZP_03803253.1| hypothetical protein PROPEN_01608 [Proteus penneri ATCC 35198] gi|225203439|gb|EEG85793.1| hypothetical protein PROPEN_01608 [Proteus penneri ATCC 35198] Length = 302 Score = 37.8 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 2/123 (1%) Query: 33 MVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQD 92 + +G+ + + + +Q ++ + + +S + S M I Sbjct: 18 ISSGRRVEKPSDDPMAASQAVMVKQSESRNQQYATARGFAKNSMSLQMSLASQMVNITTK 77 Query: 93 MVGPLVILLEGKT-DNNKFPINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNG 150 + LV T + A L+ + V N D G+Y+F+G S + P Sbjct: 78 IQETLVAAGNDATLSDEDRSSLADQLQGLKDQLVGIGNTKDGVGRYIFAGFQSDKPPFVA 137 Query: 151 YFT 153 T Sbjct: 138 DAT 140 >gi|190893969|ref|YP_001980511.1| flagellin C protein [Rhizobium etli CIAT 652] gi|190699248|gb|ACE93333.1| flagellin C protein [Rhizobium etli CIAT 652] Length = 343 Score = 37.8 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 96/302 (31%), Gaps = 54/302 (17%) Query: 54 EWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN 113 + ++ + L ++ T+ A + S IV ++ +V E D K Sbjct: 42 TMRSDNLALSAVSDALGLGAAKVDTAYAAMDSALDIVSEIKEKIVAATEKGVDKTKIQQE 101 Query: 114 AGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEEN 173 L++ S A+ FSG N + S K + Sbjct: 102 LDQLQEQLLSIAQSAS--------FSGEN--------WVAGASGTKSVVSSFV------- 138 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 + S+ + +MTD++ + + N+ + + T I+ Sbjct: 139 ---------RDGSNAVSVKMTDYVLD----------------SGTLGNVLFGMTSTGAIE 173 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGI 293 S+ + VI + G LS ++ L + + LG Sbjct: 174 TSSGIIGTAFNGTYGGTVIAMPSIYDLDITGFTQGQLDAALSGIELVLGAMTAAGSALGS 233 Query: 294 SEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 I + + ++ ID+ I + + + ++LS L + ++ +Q LSI Sbjct: 234 ISTRIQLQENLVSGLHDSIDSGIGRLVDADMEEESSRLSALQTQQQLG------IQSLSI 287 Query: 354 LN 355 N Sbjct: 288 AN 289 >gi|90418380|ref|ZP_01226292.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1] gi|90338052|gb|EAS51703.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1] Length = 299 Score = 37.8 bits (86), Expect = 2.6, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 39/96 (40%), Gaps = 6/96 (6%) Query: 260 NLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKS 319 LT + M+S V + L + + LG ++ ++ + F+ N + I+ + Sbjct: 199 TLTGATTDANISTMISDVDEALGAMTTAASNLGAAKSRMDIQSEFVSNLRDSIEKGVGTL 258 Query: 320 IGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + + +L L + ++ +Q LSI N Sbjct: 259 VDADMTEESTRLKALQTQQQLG------VQALSIAN 288 >gi|118477175|ref|YP_894326.1| flagellar hook-associated protein FlgL [Bacillus thuringiensis str. Al Hakam] gi|218902854|ref|YP_002450688.1| putative flagellar hook-associated protein FlgL [Bacillus cereus AH820] gi|225863598|ref|YP_002748976.1| putative flagellar hook-associated protein FlgL [Bacillus cereus 03BB102] gi|229121291|ref|ZP_04250522.1| Flagellar hook-associated protein 3 [Bacillus cereus 95/8201] gi|229183931|ref|ZP_04311147.1| Flagellar hook-associated protein 3 [Bacillus cereus BGSC 6E1] gi|118416400|gb|ABK84819.1| flagellar hook-associated protein 3 [Bacillus thuringiensis str. Al Hakam] gi|218537108|gb|ACK89506.1| putative flagellar hook-associated protein FlgL [Bacillus cereus AH820] gi|225788652|gb|ACO28869.1| putative flagellar hook-associated protein FlgL [Bacillus cereus 03BB102] gi|228599583|gb|EEK57187.1| Flagellar hook-associated protein 3 [Bacillus cereus BGSC 6E1] gi|228662136|gb|EEL17745.1| Flagellar hook-associated protein 3 [Bacillus cereus 95/8201] Length = 287 Score = 37.8 bits (86), Expect = 2.6, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 49/148 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + V L G + + + V Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGTNSEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 123 YLANTKEQGRYIFGGDSAEKPPFTEDGT 150 >gi|86356321|ref|YP_468213.1| flagellin C protein [Rhizobium etli CFN 42] gi|86280423|gb|ABC89486.1| flagellin C protein [Rhizobium etli CFN 42] Length = 302 Score = 37.8 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + L+ V+ L + A LG K I + F+ ++ ID+ I + + + + Sbjct: 211 IQTALTNVESALKSMTSAGAALGSISKRIELQENFVSALSDSIDSGIGRLVDADMEEESS 270 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +LS L + +++ +Q LSI N Sbjct: 271 KLSALQTQQQLA------VQSLSIAN 290 >gi|85110074|ref|XP_963224.1| hypothetical protein NCU09469 [Neurospora crassa OR74A] gi|28924894|gb|EAA33988.1| conserved hypothetical protein [Neurospora crassa OR74A] gi|38524252|emb|CAE75717.1| related to EDE1 protein [Neurospora crassa] Length = 1285 Score = 37.8 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 14/126 (11%), Positives = 38/126 (30%), Gaps = 4/126 (3%) Query: 226 IKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLST--VQQGLSG 283 + + + G+R + + L N L+ + + + Sbjct: 490 LTTHVTGGSTGSAPAGGVRTSPMPPTVEDDLLGDA-DPEVNNKLSNETTELANLSNQIGS 548 Query: 284 IIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYM 343 + +Q + N E + + +++ + + A + L ++ + Sbjct: 549 LTKQVQDVQTQRTNTQNELSQASQQKKNFEQRLTQLRALYEKEA-QDVRALETQLSTAKA 607 Query: 344 ITTKLQ 349 T KLQ Sbjct: 608 ETKKLQ 613 >gi|323697479|ref|ZP_08109391.1| flagellar hook-associated protein 3 [Desulfovibrio sp. ND132] gi|323457411|gb|EGB13276.1| flagellar hook-associated protein 3 [Desulfovibrio desulfuricans ND132] Length = 554 Score = 37.8 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 63/203 (31%), Gaps = 6/203 (2%) Query: 15 MNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTK 74 +N L ++K + + SD +T IL+ + + + S Sbjct: 16 LNTSLTSLMDLNIKAQTQKAINKPSDDP----TGMTRILDHRDTLRSLDQYSENISTAKG 71 Query: 75 RLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG 134 L ++ L + I+ G D+N + +R +E V+ +N E Sbjct: 72 WLGSADEALMQVSTILTRAKELATQAATGTVDDNNREQISYEMRSLFEQLVSLSNSDFED 131 Query: 135 QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 +F+G + + + + ++ L+ ++ M Sbjct: 132 NSIFAGHKTDGAAFKQIMWLTTNDETFGNAEFTVNGSSDTTVLVQYYDTTGATPVGGDMN 191 Query: 195 DFIKQLEDKFSDDEY--WANNWS 215 L ++S D W + S Sbjct: 192 LSDPNLGVRYSIDGGRTWKTDGS 214 >gi|317052130|ref|YP_004113246.1| hypothetical protein Selin_1963 [Desulfurispirillum indicum S5] gi|316947214|gb|ADU66690.1| hypothetical protein Selin_1963 [Desulfurispirillum indicum S5] Length = 1509 Score = 37.8 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 35/104 (33%), Gaps = 1/104 (0%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVIL-LEGKTD 106 R++ L ++ + + + S L+ S L SM I+Q + Sbjct: 45 RISQALSFQNSIDLFTQYQRNISNAQTWLNLSDGSLQSMSSILQMAKNNYALAGASDSMS 104 Query: 107 NNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNG 150 + A + ++ N +Y+F G + ++P Sbjct: 105 PDARKALANDVEAMRNELISLGNTKHLDRYIFGGYQTRDEPFQE 148 >gi|312438162|gb|ADQ77233.1| extracellular matrix binding protein [Staphylococcus aureus subsp. aureus TCH60] Length = 7075 Score = 37.8 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6332 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6391 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6392 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 6451 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6452 TNKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6508 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6509 TQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 6567 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V +G+ Sbjct: 6568 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6626 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6627 LATAKQQAKDALRQMTHLSDAQKQSITVQIDNATQVTGVQSVKDNATNLDNAMNQLRNSI 6686 Query: 343 M 343 Sbjct: 6687 A 6687 >gi|209967003|ref|YP_002299918.1| flagellar protein Laf1 (LafA or FlaB) [Rhodospirillum centenum SW] gi|209960469|gb|ACJ01106.1| flagellar protein Laf1 (LafA or FlaB) [Rhodospirillum centenum SW] Length = 435 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 40/94 (42%), Gaps = 6/94 (6%) Query: 262 TDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIG 321 + ++TV ++ ++ A +G ++ ++ + F + ++ ++ + + Sbjct: 337 AAEQYKNVKSSAIATVDSAITLAGQKLATIGAIQRQVSGLQEFTKTLSDTLNEGLGALVD 396 Query: 322 VEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + A+L L + +++ +Q LSI N Sbjct: 397 ADMADESARLQALQTRQQLA------IQSLSIAN 424 >gi|160901876|ref|YP_001567457.1| flagellar hook-associated protein 3 [Petrotoga mobilis SJ95] gi|160359520|gb|ABX31134.1| flagellar hook-associated protein 3 [Petrotoga mobilis SJ95] Length = 298 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 49/148 (33%), Gaps = 7/148 (4%) Query: 1 MKTT--GISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQE 58 M+ T +S+ ++ + ++L K L+ ++ +G+ Y A T I + Sbjct: 1 MRITENLLSSRTLNDIQDVLRK-----YSDLNSQLTSGKKVRYPSDNAAVATRISNLDSR 55 Query: 59 KNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLR 118 I + ++ L + I + V + L Sbjct: 56 LREIERYKTNVETAQNYVNMYDTALQEVSSIYLRVKELAVRGANDTLTKEDKVAISEELN 115 Query: 119 DSYESFVTFANMTDEGQYLFSGINSSEK 146 V+ AN G Y+F G +++K Sbjct: 116 KINTQLVSIANTEISGNYVFGGAKNNQK 143 >gi|209547938|ref|YP_002279855.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533694|gb|ACI53629.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 303 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 L++++ GL + + + LG I + F+ ++ ID+ + + + + Sbjct: 212 ISMALTSIEAGLDAMTKAASQLGSISTRIELQENFVGALSDSIDSGVGRLVDANMEEESS 271 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +L+ L + +++ +Q LSI N Sbjct: 272 KLTALQTQQQLA------IQSLSIAN 291 >gi|282916702|ref|ZP_06324460.1| extracellular matrix-binding protein [Staphylococcus aureus subsp. aureus D139] gi|282319189|gb|EFB49541.1| extracellular matrix-binding protein [Staphylococcus aureus subsp. aureus D139] Length = 9011 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6289 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6348 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ N + Sbjct: 6349 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKANENYIDADP 6408 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6409 TKKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6465 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6466 TQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 6524 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V +G+ Sbjct: 6525 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6583 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6584 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 6643 Query: 343 M 343 Sbjct: 6644 A 6644 >gi|317121032|ref|YP_004101035.1| flagellin domain protein [Thermaerobacter marianensis DSM 12885] gi|315591012|gb|ADU50308.1| flagellin domain protein [Thermaerobacter marianensis DSM 12885] Length = 485 Score = 37.4 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 22/203 (10%), Positives = 53/203 (26%), Gaps = 6/203 (2%) Query: 149 NGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNA-QQMTDFIKQLEDKFS-- 205 + ++ + D +++ G + + A + S Sbjct: 271 TFFNVANASTGATSDVNAATVAGTDAELGSLGVNGTPVNYEAVGNRITILSGPAKGLSFT 330 Query: 206 -DDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDG 264 D SNA D + + N + + K + Sbjct: 331 VDASGTYTGGSNADDDP-TITVGTNGALTFQIGANTGQSLSVAIDDMRSQALGVKTVDVS 389 Query: 265 ARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQ 324 R+ +S + ++ + QRA LG + + L + S+ V+ Sbjct: 390 TRSG-ASNAISAIDSAINTVSVQRARLGAVQNRLEHTIANLGVAVENLQAAESRIRDVDM 448 Query: 325 HTAHAQLSTLINKIEMSYMITTK 347 A + ++ + + Sbjct: 449 ALEMANFTRNQILLQSGTAMLAQ 471 >gi|326789958|ref|YP_004307779.1| flagellin domain protein [Clostridium lentocellum DSM 5427] gi|326540722|gb|ADZ82581.1| flagellin domain protein [Clostridium lentocellum DSM 5427] Length = 283 Score = 37.4 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 36/104 (34%), Gaps = 1/104 (0%) Query: 232 IDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVL 291 I + N I ++ ++ L+ + + + + ++ + R+ L Sbjct: 151 ITLQVGANKGQIMELEIGSMTTNALGINGLSIAT-AGDAQNAIDVIDEAVNRTSKTRSKL 209 Query: 292 GISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLI 335 G + + L+N+ + S+ V+ A + + L Sbjct: 210 GAYQNRLEHTINNLENQAENLTAAESRIRDVDMAKAMMEYARLE 253 >gi|269138589|ref|YP_003295289.1| flagellar hook-associated protein [Edwardsiella tarda EIB202] gi|267984249|gb|ACY84078.1| flagellar hook-associated protein [Edwardsiella tarda EIB202] Length = 311 Score = 37.4 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 13/165 (7%) Query: 201 EDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM-----RGIRDIMFVAVIGTE 255 + + + + ++ + VS N G +DI + Sbjct: 143 DAAPFTKGAASEVTYGGGNKALTQQVDAARTMTVSHTGNQVFQPGTGEQDIFASLQQAID 202 Query: 256 FLSKNL---TDGARNVLTKK---MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKN 309 L L D A+ + K ++ L+ + RA LG ++ N + + ++N Sbjct: 203 ALKMPLEGKDDAAKKAVADKLDSANRGLRNSLNNVSRVRAELG-TQLNELDSLDAIGDEN 261 Query: 310 NI-IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 I T IS V+ + A + ++ SY + + +Q +S+ Sbjct: 262 AITYKTRISSVQDVDWNQAITDYTFRQVSLQASYKVFSDMQGMSL 306 >gi|254503983|ref|ZP_05116134.1| Bacterial flagellin N-terminus domain protein [Labrenzia alexandrii DFL-11] gi|222440054|gb|EEE46733.1| Bacterial flagellin N-terminus domain protein [Labrenzia alexandrii DFL-11] Length = 320 Score = 37.4 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 37/318 (11%), Positives = 95/318 (29%), Gaps = 34/318 (10%) Query: 18 LTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLS 77 NK+ + TG + A + + ++ S L L Sbjct: 6 TLSMTNKNMATTQNRISTGLRVNDAADNAAYWSIATTMRSDVGALSAVQDSLGLGAATLD 65 Query: 78 TSQAHLSSMQKIVQDMVGPLVILL-EGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQY 136 + ++S + ++ LV + + K + L+ E++ A + + Sbjct: 66 VTFTAINSTVDTLNEIKEKLVAAKGQTDSGREKIQEDISNLQKQLETYANSAVTSSGDNW 125 Query: 137 LFSGINS-SEKP-LNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 L + +P + G FT++S +Q+ A L S M A Sbjct: 126 LVRDPATQDMQPDVVGSFTRNSDGSTRIEQITVDLANVFLIDSAADTGLLDSDMVADLQV 185 Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGT 254 + + + + I + + + N + Sbjct: 186 AADAAATADGGTPPVDISRLTGGTASILTIDISNLDE-----SANDK------------- 227 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 + +++ V Q ++ + + +G S+K ++ + F++ ++ Sbjct: 228 -------------YVVDGLVAVVDQKIAALTDAATTIGSSKKRVDSQMDFVKALSDSYTR 274 Query: 315 YISKSIGVEQHTAHAQLS 332 I + + + + +L Sbjct: 275 GIGQLVDADMNAESTRLQ 292 >gi|228958019|ref|ZP_04119755.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|296502339|ref|YP_003664039.1| flagellar hook-associated protein FlgL [Bacillus thuringiensis BMB171] gi|228801644|gb|EEM48525.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|296323391|gb|ADH06319.1| flagellar hook-associated protein FlgL [Bacillus thuringiensis BMB171] Length = 287 Score = 37.4 bits (85), Expect = 3.3, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 8/152 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQ----SSDYGLQLGARVTSILEWEQEKNH 61 +ST +LN ++ +G+ S+ L + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + S +++T+ +T Q L S+ + Q V L G + + Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQAL----NGTNSEKELQAIGVEIDQIL 118 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 + V AN ++G+Y+F G ++ P T Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAENLPFTEDGT 150 >gi|229043493|ref|ZP_04191203.1| Flagellar hook-associated protein 3 [Bacillus cereus AH676] gi|228725871|gb|EEL77118.1| Flagellar hook-associated protein 3 [Bacillus cereus AH676] Length = 287 Score = 37.4 bits (85), Expect = 3.3, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 51/152 (33%), Gaps = 8/152 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQ----SSDYGLQLGARVTSILEWEQEKNH 61 +ST +LN ++ +G+ S+ L + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + S +++T+ +T Q L S+ + Q V L G + L Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQAL----NGTNSEKELQAIGVELDQIL 118 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 + V AN ++G+Y+F G ++ P T Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAENLPFTEDGT 150 >gi|229166580|ref|ZP_04294332.1| Flagellar hook-associated protein 3 [Bacillus cereus AH621] gi|228616834|gb|EEK73907.1| Flagellar hook-associated protein 3 [Bacillus cereus AH621] Length = 287 Score = 37.4 bits (85), Expect = 3.3, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 50/148 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + + +I + Sbjct: 3 VSTFQNANWAKNQMMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + V L G + + + V Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGTNSEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 123 YLANTKEQGRYIFGGDSAEQVPFTEDGT 150 >gi|161526178|ref|YP_001581190.1| flagellar hook-associated protein FlgL [Burkholderia multivorans ATCC 17616] gi|189349106|ref|YP_001944734.1| flagellar hook-associated protein FlgL [Burkholderia multivorans ATCC 17616] gi|160343607|gb|ABX16693.1| flagellar hook-associated protein 3 [Burkholderia multivorans ATCC 17616] gi|189333128|dbj|BAG42198.1| flagellar hook-associated protein 3 [Burkholderia multivorans ATCC 17616] Length = 411 Score = 37.4 bits (85), Expect = 3.3, Method: Composition-based stats. Identities = 37/366 (10%), Positives = 99/366 (27%), Gaps = 57/366 (15%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 ++ +++ + ++ L L+++ ++ + ++ +G + Sbjct: 45 GAAQAVQLSMTSATLSQYATNQNVALSSLQKEDQALTTVNDLLNTIHSSVMHAGDGSLSD 104 Query: 108 NKFPINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYF-------------- 152 + A L+ + +T AN TD G YLF+G S+ P Sbjct: 105 SDRSALATQLQGYRDQLLTLANSTDGAGNYLFAGYQSTTAPFANGTGGGVVYSGDRGARQ 164 Query: 153 -------------------------------TKDSLAKKSFDQMLQGFLEENSKSLLAGQ 181 + + + + ++ + Sbjct: 165 VQIADTRTIAQGDDGASVFLSVPMLGSQPVPAAGAANQGTATIGAVTITDPSAATNAHTF 224 Query: 182 HLEVSSMNAQQMTDFIKQLEDKFSDD------EYWANNWSNASDHNIKYRIKDTEGIDVS 235 + +A + + A N + + V Sbjct: 225 TITFGGTSAAPTYTVTDETVAPPTTTAPQPYAAGTAIALGNGLSVPVSGTPSPNDTFSV- 283 Query: 236 ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLST----VQQGLSGIIEQRAVL 291 G + + +D ++T + ++ I+ +A + Sbjct: 284 TPAPQAGTDVFATLDTMIAALKVPIGSDTVAAAKLANAMTTGTTKLDNTMTNILTVQASV 343 Query: 292 GISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 G E+ I + Q + + ++ + +Q + N + + +LQ L Sbjct: 344 GGREQEIQAMQAVNQTNTLQVTSNLADLTSTNMVSTISQFLQMQNALTGAQKAYAQLQNL 403 Query: 352 SILNYL 357 S+ Y+ Sbjct: 404 SLFQYI 409 >gi|30019784|ref|NP_831415.1| flagellar hook-associated protein FlgL [Bacillus cereus ATCC 14579] gi|229127065|ref|ZP_04256064.1| Flagellar hook-associated protein 3 [Bacillus cereus BDRD-Cer4] gi|229144351|ref|ZP_04272757.1| Flagellar hook-associated protein 3 [Bacillus cereus BDRD-ST24] gi|29895329|gb|AAP08616.1| Flagellar hook-associated protein 3 [Bacillus cereus ATCC 14579] gi|228639138|gb|EEK95562.1| Flagellar hook-associated protein 3 [Bacillus cereus BDRD-ST24] gi|228656418|gb|EEL12257.1| Flagellar hook-associated protein 3 [Bacillus cereus BDRD-Cer4] Length = 287 Score = 37.4 bits (85), Expect = 3.3, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 8/152 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQ----SSDYGLQLGARVTSILEWEQEKNH 61 +ST +LN ++ +G+ S+ L + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + S +++T+ +T Q L S+ + Q V L G + + Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQAL----NGTNSEKELQAIGVEIDQIL 118 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 + V AN ++G+Y+F G ++ P T Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAENLPFTEDGT 150 >gi|156097114|ref|XP_001614590.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148803464|gb|EDL44863.1| hypothetical protein, conserved [Plasmodium vivax] Length = 2085 Score = 37.4 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 56/206 (27%), Gaps = 14/206 (6%) Query: 84 SSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINS 143 ++Q Q + G + P G L S + T G LF G Sbjct: 421 GNLQSPSQGTTSS-SNMFGGLGASQAKPATGGNLFGGMSSTPGTSATTGTGSNLFGGTVQ 479 Query: 144 SEKPLNG---YFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQL 200 + G + + + L G S + + G ++ SM + L Sbjct: 480 GSQNKTGSNIFGSLSGGTQAGSSSSLFGATPSPSATTMGGNNVFSPSMTTPTSQNKFNNL 539 Query: 201 EDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKN 260 + + + ++A+ + NM G GT Sbjct: 540 FGQV-GTAGQSTSVNSAATTGASSTPGLGGATQSGSTSNMFG------SVSTGTNLGGVG 592 Query: 261 LTDGARNVLTKKMLSTVQQGLSGIIE 286 ++N+ ++ G +G Sbjct: 593 ---DSKNIFGTSSGFSLGAGNTGTNA 615 >gi|19910973|dbj|BAB87738.1| flagellin protein FliA(H) [Clostridium haemolyticum] Length = 554 Score = 37.4 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 16/148 (10%), Positives = 42/148 (28%), Gaps = 9/148 (6%) Query: 176 SLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVS 235 + G + A+ + +++ D + W + + N +I + Sbjct: 386 GSILGSDHGHGDIKAEDVVKGTTPEKEQPLDK--FKIIWPDDNSDNTTGKI------QLQ 437 Query: 236 ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISE 295 N I + + + L + + + + + I R+ LG + Sbjct: 438 VGANEGQSITISLKDMRSSALGIEKLEVTSFES-ASQSIKSCDNAIEKISNFRSELGAYQ 496 Query: 296 KNINEERVFLQNKNNIIDTYISKSIGVE 323 + L + S+ V+ Sbjct: 497 NRLEHTINNLNTSAENLQASESRIRDVD 524 >gi|326382391|ref|ZP_08204083.1| MMPL domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326199121|gb|EGD56303.1| MMPL domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 1026 Score = 37.4 bits (85), Expect = 3.5, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 22/165 (13%) Query: 36 GQSSDYGLQLGA----RVTSILEWEQEKNHIAERLHS-NSL-VTKRLSTSQAHLSSMQKI 89 G+ +D+ QLG + + + N + L + N + RLS Q + ++ Sbjct: 645 GRFADFATQLGGVEGPGTADLAQLQSSLNVLDSALQTINGQDLGSRLSQLQTGVRALADG 704 Query: 90 VQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLN 149 + + G + L+ ++ + AG+ + + + A D G N+ Sbjct: 705 ARQLSGGVSALV-----DSNVQLLAGLSQVAAQL---RAPARDIG-------NTDSA-TG 748 Query: 150 GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 Y D+ + F Q+ + F+ + K+ A MT Sbjct: 749 FYLPADAFKDQQFSQVARQFISPDGKTARFVVQTAYDPYTADAMT 793 >gi|282911014|ref|ZP_06318816.1| large surface anchored protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282324709|gb|EFB55019.1| large surface anchored protein [Staphylococcus aureus subsp. aureus WBG10049] Length = 6830 Score = 37.4 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6087 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6146 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6147 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 6206 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6207 TNKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6263 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6264 TQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 6322 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V +G+ Sbjct: 6323 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6381 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6382 LATAKQQAKDALRQMTHLSDAQKQSITVQIDNATQVTGVQSVKDNATNLDNAMNQLRNSI 6441 Query: 343 M 343 Sbjct: 6442 A 6442 >gi|254559262|ref|YP_003066357.1| flagellin [Methylobacterium extorquens DM4] gi|254266540|emb|CAX22304.1| putative flagellin (flaA-like; flaB-like) [Methylobacterium extorquens DM4] Length = 465 Score = 37.4 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 6/103 (5%) Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 + L+ A + K +++ V++ L+ + + LG S+ I+ ++ F+ Sbjct: 358 ISTIDISTLSGTAGDTTLKNIITQVEKALAKVTDAGTKLGASKTQIDGQKSFIDTLMKAN 417 Query: 313 DTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 D I + + +L L + +++ +Q LSI N Sbjct: 418 DRTIGTLVDADIEEESTKLKALQTQQQLA------VQTLSIAN 454 >gi|90418379|ref|ZP_01226291.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1] gi|90338051|gb|EAS51702.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1] Length = 322 Score = 37.4 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 6/97 (6%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 L + M+ V + LS + + LG S+ ++ + F+ N N ID + Sbjct: 221 IALASTTTDAQVNAMVRVVDKILSDMTTAASNLGASKSRMDIQSEFVSNLRNSIDKGVGT 280 Query: 319 SIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + + +L L + ++ +Q LSI N Sbjct: 281 LVDADMTEESTRLKALQTQQQLG------VQALSIAN 311 >gi|300117342|ref|ZP_07055132.1| flagellar hook-associated protein FlgL [Bacillus cereus SJ1] gi|298725177|gb|EFI65829.1| flagellar hook-associated protein FlgL [Bacillus cereus SJ1] Length = 287 Score = 37.4 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 50/148 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + + +I + Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + V L G + + + V Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGTNSEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 123 YLANTKEQGRYIFGGDSAEKPPFTEDGT 150 >gi|242278492|ref|YP_002990621.1| flagellar hook-associated protein 3 [Desulfovibrio salexigens DSM 2638] gi|242121386|gb|ACS79082.1| flagellar hook-associated protein 3 [Desulfovibrio salexigens DSM 2638] Length = 524 Score = 37.4 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 45/135 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +S +F D V + + T + + + IL+ + + + Sbjct: 3 VSQQMLFNTYVSNMNRSLTDLVDSNIQAQTQKKVNRPSDDPVGMARILDHRETLATVKQY 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + LS S L+ + I+ G G + + R ++ V Sbjct: 63 RDNIDTAKGWLSLSDTTLTQVSTIITRAKGLAEQGASGTITADNREQISYEARQLFQQLV 122 Query: 126 TFANMTDEGQYLFSG 140 + AN EG+ +++G Sbjct: 123 SLANTEYEGKSIYAG 137 Score = 36.2 bits (82), Expect = 7.5, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 34/88 (38%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 ++ L ++ ++ + A +G E + L + IS V+ Sbjct: 437 VQECLESLNLSQKHVLTKAADVGGRENRLAVADQVLSSLELNEKDRISHIEDVDVGELMT 496 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 +LS E ++ + K+++LNY+ Sbjct: 497 KLSQQQIVYEAVLKSSSMIMKMNLLNYV 524 >gi|91225881|ref|ZP_01260850.1| flagellin [Vibrio alginolyticus 12G01] gi|269965416|ref|ZP_06179535.1| Flagellin A [Vibrio alginolyticus 40B] gi|91189531|gb|EAS75807.1| flagellin [Vibrio alginolyticus 12G01] gi|222820586|gb|ACM67643.1| flagellin [Vibrio alginolyticus] gi|269829895|gb|EEZ84125.1| Flagellin A [Vibrio alginolyticus 40B] Length = 384 Score = 37.4 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 52/384 (13%), Positives = 113/384 (29%), Gaps = 52/384 (13%) Query: 10 SIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSN 69 ++ N+ + K +E+ T R++S + K+ A SN Sbjct: 2 AVTVSTNVSAMTAQRYLNKATDELNTSM---------ERLSSGHKINSAKDDAAGLQISN 52 Query: 70 SLVTKR-------------LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGM 116 L + +S +Q +M + M + ++ N + Sbjct: 53 RLTAQSRGLDVAMRNANDGISIAQTAEGAMNEATSVMQRMRDLAIQSSNGTNSPAERQAI 112 Query: 117 LRDSYESFVTFAN-----MTDEGQYL----FS------GINSSEKPL-------NGYFTK 154 +S + + N + G+ L F G +S E + Sbjct: 113 NEESM-ALIDELNRIAETTSFGGRRLLNGSFGEAAFQIGASSGEAMIMGLTSIRADDTRM 171 Query: 155 DSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNW 214 + S + + + + +KS L + + D + K DD + Sbjct: 172 GGVTFLSENGKDKNWSVDPAKSDLKITLPGMGEDEDGNVDDLEININAKAGDDIEELATY 231 Query: 215 SNASDHNIKYRIKDTEGIDVSAN-VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKK- 272 N I + + + V N++G I + + +++ Sbjct: 232 INGQSDMINASVSEDGKLQVFVAHPNVQGEISISGGLASELGLSDEPIRTSVQDIDMTTV 291 Query: 273 -----MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 +S + L + QRA LG + ++ L N +D S+ + Sbjct: 292 QGSQNAISVLDSALKYVDSQRADLGAKQNRLSHSINNLANIQENVDASNSRIKDTDFAKE 351 Query: 328 HAQLSTLINKIEMSYMITTKLQKL 351 Q++ + I + ++L Sbjct: 352 TTQMTKAQILQQAGTSILAQAKQL 375 >gi|229149941|ref|ZP_04278169.1| Flagellar hook-associated protein 3 [Bacillus cereus m1550] gi|228633622|gb|EEK90223.1| Flagellar hook-associated protein 3 [Bacillus cereus m1550] Length = 287 Score = 37.4 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 8/152 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQ----SSDYGLQLGARVTSILEWEQEKNH 61 +ST +LN ++ +G+ S+ L + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + S +++T+ +T Q L S+ + Q V L G + + Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQAL----NGTNSEKELQAIGVEIDQIL 118 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 + V AN ++G+Y+F G ++ P T Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAENLPFTEDGT 150 >gi|228914318|ref|ZP_04077933.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228945342|ref|ZP_04107697.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814314|gb|EEM60580.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228845312|gb|EEM90348.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 287 Score = 37.4 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 50/148 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + + +I + Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + V L G + + + V Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGTNSEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 123 YLANTKEQGRYIFGGDSAEKPPFTEDGT 150 >gi|85710171|ref|ZP_01041236.1| Flagellin, N-terminus [Erythrobacter sp. NAP1] gi|85688881|gb|EAQ28885.1| Flagellin, N-terminus [Erythrobacter sp. NAP1] Length = 305 Score = 37.4 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 95/358 (26%), Gaps = 54/358 (15%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 M ST + FER L KD +L ++ TG + G + + + + Sbjct: 1 MSFVSNSTGAFFERSLTQMGSLRKDVERLQTQIATGVRIERGSDDPVAASRLRALARLET 60 Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 A + + + + L+ + + + I+Q V+ T A L Sbjct: 61 RGATEAENAARLEQDLAEAGNQIEGVVSILQRARELAVLAASDTTGETGRAAIADELDQM 120 Query: 121 YESFVTFANM-TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLA 179 + +N + G LF+G + Sbjct: 121 SDELFARSNSLSITGAPLFAGT-------------------AGAPAFVRDANGVVTYNGN 161 Query: 180 GQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVN 239 GQ + ++ + + D + + + Sbjct: 162 GQSGAIPVAPGTEIERGVTGAQLFEFD-------------------VGGAPTSSFAVIAD 202 Query: 240 MRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNIN 299 + + AR+ L + + + V+G + Sbjct: 203 --------LAIAMRSAGGDP--AQAARDALAG-----IDAAIDTANRSQTVIGTRAGWVE 247 Query: 300 EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + Q + + S+ + +L + +E S T++ L++ N L Sbjct: 248 AIQQDQQTRAIDVAEKRSQIADTDVADTIVRLQQALTALEASQASFTRVSSLTLFNAL 305 >gi|170742082|ref|YP_001770737.1| flagellin domain-containing protein [Methylobacterium sp. 4-46] gi|168196356|gb|ACA18303.1| flagellin domain protein [Methylobacterium sp. 4-46] Length = 494 Score = 37.4 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 9/125 (7%) Query: 231 GIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 ID S + F L A + K +++ V + L+ + + Sbjct: 368 IIDTSVGSYDASFGG---GSYSIANFDISKLVGTAGDSNLKDIIAAVDKALAAVTDAGTK 424 Query: 291 LGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 LG + I + F+ + I + + +L L + +++ +Q Sbjct: 425 LGAGKNQIEGQTSFVDSLMKANTATIGTLVDADIEEESTKLKALQTQQQLA------VQA 478 Query: 351 LSILN 355 LSI N Sbjct: 479 LSIAN 483 >gi|163939545|ref|YP_001644429.1| flagellar hook-associated protein FlgL [Bacillus weihenstephanensis KBAB4] gi|163861742|gb|ABY42801.1| flagellar hook-associated protein 3 [Bacillus weihenstephanensis KBAB4] Length = 287 Score = 37.4 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 8/152 (5%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQ----SSDYGLQLGARVTSILEWEQEKNH 61 +ST +LN ++ +G+ S+ L + Sbjct: 3 VSTFQNANWAKNQMMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANIEQM 62 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 + S +++T+ +T Q S+ + Q + L G + + Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTLQAL----NGTNSEKELKAIGAEIDQIL 118 Query: 122 ESFVTFANMTDEGQYLFSGINSSEKPLNGYFT 153 + V AN ++G+Y+F G ++ + P T Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEQVPFTEDGT 150 >gi|229109196|ref|ZP_04238795.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock1-15] gi|228674206|gb|EEL29451.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock1-15] Length = 296 Score = 37.4 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 12 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 71 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + V L + + + V Sbjct: 72 QKDLADSKNVLTQTENTLQGIFKSLTRADQLTVQALNEPNGEKELKAIGAEIDQILKQVV 131 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 132 YLANTKEQGRYIFGGDSAEKSPFTEDGT 159 >gi|299783617|gb|ADJ41615.1| Membrane protein family protein [Lactobacillus fermentum CECT 5716] Length = 903 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 28/215 (13%), Positives = 68/215 (31%), Gaps = 14/215 (6%) Query: 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQ-----------LGARVTS 51 ++ S+ S + + + D K + T D Q LG ++ Sbjct: 388 SSAASSLSEVYQNDTAIAQSAGDLAKSTTDATTKAQLDAIAQKAQSNVTTIQGLGTALSQ 447 Query: 52 ILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFP 111 + + + +L++ + + LS +Q L+ +++ + G L + Sbjct: 448 VNSLSTSLSGLQSQLNNLASLQTTLSGAQTTLNQANQLLTTLQGYQGALSAMPSQLAALK 507 Query: 112 INAGMLRDSYESFVTFANMTDEG--QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGF 169 L S + + G QY +G++++ + + +Q+ G Sbjct: 508 QATNSLASGAASLQSGMSTAQAGINQYT-AGVDTAASGASQLSANSASLTSGANQLQSGV 566 Query: 170 LEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKF 204 + + A + N+ + QL Sbjct: 567 SQYTAGVNQANAGTGQLTANSAALVSGANQLATAL 601 >gi|282895494|ref|ZP_06303631.1| ABC-transporter DevB family protein [Raphidiopsis brookii D9] gi|281199527|gb|EFA74390.1| ABC-transporter DevB family protein [Raphidiopsis brookii D9] Length = 399 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 11/121 (9%), Positives = 32/121 (26%), Gaps = 7/121 (5%) Query: 12 FERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSL 71 + L + E + D ++ ++ + ++++ Sbjct: 162 TSAQKAIIARLQAELNNAQRE--NQRYEDLYENGAVSASNAESKRLRRDTLQQQINEAKA 219 Query: 72 VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT 131 R +Q L Q + +V + TD + + S +++ Sbjct: 220 ALNR---TQQTLQKQLNEAQSRLNSIVEIR--PTDLQVAKADLASAKASITQVQAELDLS 274 Query: 132 D 132 Sbjct: 275 I 275 >gi|99080881|ref|YP_613035.1| flagellin-like [Ruegeria sp. TM1040] gi|99037161|gb|ABF63773.1| Flagellar filament 33 kDa core protein (Class B) [Ruegeria sp. TM1040] Length = 292 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 6/99 (6%) Query: 257 LSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYI 316 L+ NLT + L+ ++ L I A LG S I ++ F+ + ++ + Sbjct: 188 LASNLTAITDSTTAATALTEIEDFLQVAINGAASLGSSASRIEDQSDFVGRLVDAMEQGV 247 Query: 317 SKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 S + A A+LS L + E++ +Q L+I N Sbjct: 248 SAMTDTDMEEASARLSALKTQQELA------IQSLTIAN 280 >gi|84570483|dbj|BAE72671.1| deduced tail fiber protein [Xanthomonas oryzae phage OP1hC] Length = 512 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 23/206 (11%), Positives = 63/206 (30%), Gaps = 9/206 (4%) Query: 90 VQDMVGPLVILLEGKTD-NNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPL 148 D + D ++ + + S T L S I++ + + Sbjct: 18 GDDARAAFSKVNSNFADVQSQITAEVSARQSAISSVQTTVATKASSSDLASEISARQSAI 77 Query: 149 NGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDE 208 + + ++A K+ L + ++ + Q + ++ + I + S + Sbjct: 78 S--SVQTTVATKASSSDLASEISARQSAISSVQTTVATKASSSDLASEISARQSAISSVQ 135 Query: 209 YWANNWSNASDHNIKYRIKDTEGIDVSANVN----MRGIRDIMFVAVIGTEFLSKNLTDG 264 + AS ++ I + D + + + I A + E ++ D Sbjct: 136 --TTVATKASSSDLASEISARQSADSAISATVTAQGQAINQRALSADLTAEVAARQAADV 193 Query: 265 ARNVLTKKMLSTVQQGLSGIIEQRAV 290 A + + + + G++ Sbjct: 194 ALQTTLQAADTALGSRIDGVLSMTGR 219 >gi|116250492|ref|YP_766330.1| flagellin A [Rhizobium leguminosarum bv. viciae 3841] gi|115255140|emb|CAK06214.1| flagellin, major subunit of flagellum [Rhizobium leguminosarum bv. viciae 3841] gi|262283894|gb|ACY40756.1| FlaC [Rhizobium leguminosarum bv. viciae] Length = 303 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 L++++ GL + + + LG I + F+ ++ ID+ + + + + Sbjct: 212 ISMALTSIEAGLEAMTKAASQLGSISTRIELQEGFVSALSDSIDSGVGRLVDANMEEESS 271 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +LS L + +++ +Q LSI N Sbjct: 272 KLSALQTQQQLA------IQSLSIAN 291 >gi|255596414|ref|XP_002536530.1| Flagellar hook-associated protein, putative [Ricinus communis] gi|223519372|gb|EEF25854.1| Flagellar hook-associated protein, putative [Ricinus communis] Length = 194 Score = 37.0 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 45/129 (34%), Gaps = 1/129 (0%) Query: 229 TEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQR 288 ++ ++V + + + ++ R +T + L I + Sbjct: 67 SQTVNVDVSGLESLLNKLDTAINALSQPTVSPGDPAVRTAITD-AMDGSGTTLELIAGKI 125 Query: 289 AVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKL 348 A G ++ ++ N + I + ++ A +L+ ++ SY +K+ Sbjct: 126 ASFGGAQNVMDTLNGNHANVSLSNQNAIFELGSLDYGQATVELNGYNTALQASYKAYSKI 185 Query: 349 QKLSILNYL 357 LS+ N L Sbjct: 186 SGLSLFNIL 194 >gi|241203116|ref|YP_002974212.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857006|gb|ACS54673.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 303 Score = 37.0 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 L++++ GL + + + LG I + F+ ++ ID+ + + + + Sbjct: 212 ISMALTSIEAGLEAMTKAASQLGSISTRIELQEGFVSALSDSIDSGVGRLVDANMEEESS 271 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +LS L + +++ +Q LSI N Sbjct: 272 KLSALQTQQQLA------IQSLSIAN 291 >gi|149184214|ref|ZP_01862532.1| Flagellin, N-terminus [Erythrobacter sp. SD-21] gi|148831534|gb|EDL49967.1| Flagellin, N-terminus [Erythrobacter sp. SD-21] Length = 303 Score = 37.0 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 97/353 (27%), Gaps = 55/353 (15%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST + FER L + L + + TG+ + + +++ Sbjct: 4 LSTGAFFERSTRQIGTLRSQAETLQQRIGTGERLERSSDDPVAAARLRMLARQERIGDVD 63 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 ++ L LS + L S+ IV + V +N+ + E+ V Sbjct: 64 TRNSQLAEADLSLTDQALGSIADIVIRVRELAVQASSATLSDNQRSAIGTEIGSLRENLV 123 Query: 126 TFANM-TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 +N G L G + Y + A+ G + + GQ +E Sbjct: 124 LLSNSRNIAGHALLGGKATGPA----YVDGGAGAQ------FVGTAQVTPLEIGEGQSVE 173 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIR 244 + ++ +F N Sbjct: 174 P-GLTGPEVFEF---------------------------------------TTANGPTDL 193 Query: 245 DIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVF 304 + + A L+ + GL + + V+G I+ Sbjct: 194 FAVLGGLAAALAAGGQTATEA----GSAALADLDAGLEKVTTAQTVVGARLNWIDLMAER 249 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + + + G + ++L + +E S +L LS+ + L Sbjct: 250 REITAERMAEERADVGGADIAATMSRLQETLTILEASQASFVRLANLSLFSML 302 >gi|229069291|ref|ZP_04202581.1| Flagellar hook-associated protein 3 [Bacillus cereus F65185] gi|228713778|gb|EEL65663.1| Flagellar hook-associated protein 3 [Bacillus cereus F65185] Length = 296 Score = 37.0 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 12 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 71 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + V L + + + V Sbjct: 72 QKDLADSKNVLTQTENTLQGIFKSLTRADQLTVQALNEPNGEKELKAIGAEIDQILKQVV 131 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 132 YLANTKEQGRYIFGGDSAEKSPFTEDGT 159 >gi|327191211|gb|EGE58254.1| putative flagellin protein [Rhizobium etli CNPAF512] Length = 321 Score = 37.0 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 110/352 (31%), Gaps = 54/352 (15%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T++ + +N + +G + A + + ++ Sbjct: 12 TSILTNNAAMAALQTLRGVNDSLKDTQGRVSSGYRVEKAADNAAYWSIATTMRSDNLALS 71 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ A + S +V ++ +V E D K L++ S Sbjct: 72 AVSDALGLGAAKVDTAYAAMDSALDVVSEIKAKIVAATEKGVDKTKIQQELDQLQEQLLS 131 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A+ FSG N + S K + Sbjct: 132 IAQSAS--------FSGEN--------WVAGASGTKSVVSSFV----------------R 159 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + S+ + +MTD++ + + N+ + + T I+ S+ + Sbjct: 160 DGSNAVSVKMTDYVLD----------------SGTLGNVLFGMTSTGAIETSSGIIGTAF 203 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 VI + G LS ++ L + + LG I + Sbjct: 204 NGTYGGTVIVMPSIYDLDITGFTQGQLDAALSGIELVLGAMTAAGSALGSISTRIQLQEN 263 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ + ID+ I + + + ++LS L + ++ +Q LSI N Sbjct: 264 FVSGLRDSIDSGIGRLVDADMEEESSKLSALQTQQQLG------IQSLSIAN 309 >gi|290986785|ref|XP_002676104.1| predicted protein [Naegleria gruberi] gi|284089704|gb|EFC43360.1| predicted protein [Naegleria gruberi] Length = 1029 Score = 37.0 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 46/111 (41%), Gaps = 5/111 (4%) Query: 244 RDIMFVAVI-GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 RD+ A + + +++ ++ + +++ I +A L + + + Sbjct: 363 RDLEQNAQLRASTLVNQGISPSDIYTKHAATVEVLKEKKEEIKNLQASLETANHTVKNQE 422 Query: 303 VFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSI 353 + K ++ T I ++ ++ L ++E+S+ ++++ L+I Sbjct: 423 TETERKVGLLTTQNEDLIK-QKDEIEQRVKDLERQLEISF---SRVETLNI 469 >gi|116253011|ref|YP_768849.1| flagellin protein [Rhizobium leguminosarum bv. viciae 3841] gi|115257659|emb|CAK08756.1| Probable flagellin. Unrelated to other flagellins in 3841, function unknown [Rhizobium leguminosarum bv. viciae 3841] gi|262283899|gb|ACY40759.1| FlaH [Rhizobium leguminosarum bv. viciae] Length = 337 Score = 37.0 bits (84), Expect = 4.3, Method: Composition-based stats. Identities = 37/321 (11%), Positives = 95/321 (29%), Gaps = 27/321 (8%) Query: 13 ERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLV 72 + + +++N++ + TG + + + ++ + + Sbjct: 15 DAALYVLRDINRNMTVTQNHITTGMRVEKASDNAVYWSIATTARTDNKAVSAIQDALGMA 74 Query: 73 TKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD 132 + T+ + S+ +V ++ LV E D NK L++ S A Sbjct: 75 AATMGTAYTGVQSVIDVVSEIKAKLVAATEDGIDKNKINEEIKQLQEQLRSVSESATFNS 134 Query: 133 EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQ 192 + + + + +P + A + + + +N+ ++ + Sbjct: 135 DNWVVLTNDATPTQPRQIPASFIRNADGTISIGMLSYHIDNTPVGATTSKDARYLIDDRA 194 Query: 193 MTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVI 252 + Y+A A ++ + T V + Sbjct: 195 TGSGEYGVL----TSAYFATELGAAQNYVLMTSKNGTTTGQVVIS--------------- 235 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 +T +M+S V L+ + + G EK IN + F ++ I Sbjct: 236 --------VTSSTTQGQIGQMISVVDAALTQLTTVGSAFGALEKRINLQNDFATKLHDNI 287 Query: 313 DTYISKSIGVEQHTAHAQLST 333 I + + + ++L Sbjct: 288 TAGIGRLVDADMEEESSRLRA 308 >gi|282905783|ref|ZP_06313638.1| cell wall associated fibronectin-binding protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282331075|gb|EFB60589.1| cell wall associated fibronectin-binding protein [Staphylococcus aureus subsp. aureus Btn1260] Length = 8193 Score = 37.0 bits (84), Expect = 4.3, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 6332 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 6391 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 6392 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 6451 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 6452 TNKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 6508 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 6509 TQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 6567 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V +G+ Sbjct: 6568 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 6626 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 6627 LATAKQQAKDALRQMTHLSDAQKQSITVQIDNATQVTGVQSVKDNATNLDNAMNQLRNSI 6686 Query: 343 M 343 Sbjct: 6687 A 6687 >gi|52143718|ref|YP_083110.1| flagellar hook-associated protein FlgL [Bacillus cereus E33L] gi|51977187|gb|AAU18737.1| flagellar hook-associated protein 3 [Bacillus cereus E33L] Length = 287 Score = 37.0 bits (84), Expect = 4.3, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 50/148 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + + +I + Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + V L G + + + V Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGTNSEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 123 YLANTKEQGRYIFGGDSAEKPPFTEDGT 150 >gi|238782799|ref|ZP_04626828.1| Flagellin and hook-associated protein [Yersinia bercovieri ATCC 43970] gi|238716222|gb|EEQ08205.1| Flagellin and hook-associated protein [Yersinia bercovieri ATCC 43970] Length = 278 Score = 37.0 bits (84), Expect = 4.4, Method: Composition-based stats. Identities = 39/316 (12%), Positives = 100/316 (31%), Gaps = 62/316 (19%) Query: 47 ARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKI-VQDMVGPLVILLEGKT 105 A + + ++ ++I + + L LSS+ I +++ ++ Sbjct: 17 AGASQAIIYQNALSNINQFDTARLYAQDALEQEDNVLSSVGNILTKNLSEKIIAAGNDTH 76 Query: 106 DNNKFPINAGMLRDSYESFVTFANM-TDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQ 164 + A L+ ++ + AN G+++F+G + +P + + D Sbjct: 77 SDADRAALATELQGIRDNLLDLANSKNSNGRFIFAGFKTGSEPF-----QKDGSYVGGDT 131 Query: 165 MLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKY 224 + ++++ + +V F+ D Sbjct: 132 PPTQIVADSTEMQVGHIGSDV----------FMTGTSDDIFA------------------ 163 Query: 225 RIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGI 284 +D + I D A + + V+ G+ + Sbjct: 164 ------ALDSAIAALNTPIVDDA--------------DREALHQVLDSANIAVKNGIDNL 203 Query: 285 IEQRAVLGISEKNIN-----EERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIE 339 + +A +G + + I+ + ++ + +T S + A +++S + Sbjct: 204 GKIQAQVGTNLQQIDSLALNSATQKINIESRLQETVGSDYDSIITLIAQSKMSDF--ALS 261 Query: 340 MSYMITTKLQKLSILN 355 S M+ +QK+SI N Sbjct: 262 SSMMVFQSMQKMSIFN 277 >gi|222056391|ref|YP_002538753.1| Cna B domain protein [Geobacter sp. FRC-32] gi|221565680|gb|ACM21652.1| Cna B domain protein [Geobacter sp. FRC-32] Length = 1946 Score = 37.0 bits (84), Expect = 4.4, Method: Composition-based stats. Identities = 30/243 (12%), Positives = 70/243 (28%), Gaps = 8/243 (3%) Query: 59 KNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLR 118 + L + T + + L ++ + + ++ T+ AG+ Sbjct: 1036 SQQLEVTLTGYASGTAAVEVAAGALLNLGDLPLSLNPTSAVIKGTITNAADGQALAGVTV 1095 Query: 119 DSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLL 178 SF A +G YLF + + A S G L + +L Sbjct: 1096 AVTGSFNGTAITGADGTYLFPEVTPGSVTVTASKAGYFQATGSGSISAGGLLLFTPQLVL 1155 Query: 179 AGQHLEVSSMNA----QQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEG-ID 233 + ++ + + + +D ++A+ + I + +D Sbjct: 1156 IPPQPDTGTITGRVVDATTKEALSGVVLTLQNDSA-VRTVTDATGSFLLSNIPVGDQAVD 1214 Query: 234 VSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLS--TVQQGLSGIIEQRAVL 291 S + I A + + L+ + K +S + + G Sbjct: 1215 FSLPGYSAAVAKITSTAGFSLDLGTLPLSSNPTTGVLKVTVSDAATGKAIEGATITVDGA 1274 Query: 292 GIS 294 G++ Sbjct: 1275 GLT 1277 >gi|238922535|ref|YP_002936048.1| flagellar hook-associated protein FlgL [Eubacterium rectale ATCC 33656] gi|238874207|gb|ACR73914.1| flagellar hook-associated protein FlgL [Eubacterium rectale ATCC 33656] Length = 510 Score = 37.0 bits (84), Expect = 4.5, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 59/191 (30%), Gaps = 2/191 (1%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 I+ + I K + +M T + + L +H+ + Sbjct: 3 ITNNMIMGNTKTNINSTKVLVDKYNTQMTTQKKISKASEDPVIAIRSLRLSTSLSHLDQY 62 Query: 66 LHSN-SLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESF 124 +N + + ++ LS+M+ ++ D+ V + L E Sbjct: 63 KDNNIPDASSWMDVTETALSNMKSLLTDIRTQCVNGSTDTLTADDRNTILQQLTALSEQV 122 Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 T N G+ +F+G +S K L S + + + E+ + Sbjct: 123 YTEGNADYAGRTVFTGYRTSSK-LTFQKDTKSTYQITQEFSAADLSEKRYYTNGVTVPNS 181 Query: 185 VSSMNAQQMTD 195 +++ TD Sbjct: 182 INAATPDCATD 192 >gi|126178190|ref|YP_001046155.1| methyl-accepting chemotaxis sensory transducer [Methanoculleus marisnigri JR1] gi|125860984|gb|ABN56173.1| methyl-accepting chemotaxis sensory transducer [Methanoculleus marisnigri JR1] Length = 793 Score = 37.0 bits (84), Expect = 4.6, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 56/153 (36%), Gaps = 7/153 (4%) Query: 186 SSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRD 245 +S+ A + +F K ++ A A+ + +G+ +A +GIR Sbjct: 644 ASIEAAKAGEFGKGFAVVANEIHNLAEQSKKATSNIRAILTDIQQGVSSTAASTEQGIRS 703 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVL-GISEKNINEERVF 304 + A + + VL + + T Q+ + + GI + + E + Sbjct: 704 VTDAAQLTSN------AQEVIEVLAQSIADTSQEVIEIATSIQTQASGIDQISRAMENIR 757 Query: 305 LQNKNNIIDTYISKSIGVEQHTAHAQLSTLINK 337 + N+ T+ ++ + H A+L + + Sbjct: 758 DAAQKNLETTHKAEKTAEDLHELGARLKRITQQ 790 >gi|148979884|ref|ZP_01815762.1| flagellin [Vibrionales bacterium SWAT-3] gi|145961576|gb|EDK26877.1| flagellin [Vibrionales bacterium SWAT-3] Length = 377 Score = 37.0 bits (84), Expect = 4.7, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 88/302 (29%), Gaps = 33/302 (10%) Query: 76 LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFAN------ 129 +S Q +M + M + L+ +N R + + +T N Sbjct: 72 ISIMQTAEGAMNETTNIMQRMRDLSLQASNGSNS-----QSERTAIQEEITALNDELNRI 126 Query: 130 ---MTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVS 186 + G+ L +G N + + M + S +A S Sbjct: 127 AETTSFGGKKLLNG-NFGSTSFQIGGSSGEAVQIGLKSMRTDDINMGGFSYVANGMASDS 185 Query: 187 SMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDI 246 D D+F + N D + + VSA+VN G I Sbjct: 186 WAVKSNQNDMTMSFTDRFGQPQEITINAKVGDDIEELATYINGQTDLVSASVNDDGQLQI 245 Query: 247 MFV--------AVIGTEFLSKNLTDGARNVLTK----------KMLSTVQQGLSGIIEQR 288 + G+ +++ G + + +S + + + R Sbjct: 246 YMSGEDTSGTISFSGSLASELSMSAGYYESVNDINVTDVGGAQRAVSILDTAMKYVDSHR 305 Query: 289 AVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKL 348 + LG + + L+N + + T S+ + Q+ ++S I + Sbjct: 306 SELGAMQNRFDHAINNLENVHENLATSNSRIKDTDYAKETTQMLKQQILQQVSTTILAQA 365 Query: 349 QK 350 ++ Sbjct: 366 KQ 367 >gi|90411238|ref|ZP_01219250.1| hypothetical molybdenum ABC transporter, periplasmic molybdenum-binding protein [Photobacterium profundum 3TCK] gi|90327767|gb|EAS44098.1| hypothetical molybdenum ABC transporter, periplasmic molybdenum-binding protein [Photobacterium profundum 3TCK] Length = 259 Score = 37.0 bits (84), Expect = 4.7, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 40/107 (37%) Query: 158 AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNA 217 K ++ F S +V+ A +T+ + ++ D + D+ S A Sbjct: 3 VSKKLSVLVVSFAAAFSSITPVYAAEKVTIFAASSLTNAMNEIADIYQDETGVKTAMSFA 62 Query: 218 SDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDG 264 S + +I D+ + N + + + VI +F + LT+ Sbjct: 63 SSSTLARQIAQGAPADIYLSANNKWMDYVFEQGVIDADFRHQLLTNS 109 >gi|295129650|ref|YP_003580313.1| Osmosensitive K+ channel histidine kinase KdpD [Propionibacterium acnes SK137] gi|291376722|gb|ADE00577.1| Osmosensitive K+ channel histidine kinase KdpD [Propionibacterium acnes SK137] Length = 830 Score = 37.0 bits (84), Expect = 4.7, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 38/268 (14%) Query: 99 ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSL- 157 L + ++ ++ S + Y F KP + L Sbjct: 405 ALTTDVLAYELLAVVVALVGGAFSSLIAALASGFALDYFF------TKPFYTVTVNEPLH 458 Query: 158 -------------AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN---AQQMTDFIKQLE 201 D+ + + +G V+ + + + + Sbjct: 459 LVALLLYLLTAALVSVVVDRAARKTRVARRAAAESGLLQSVAGLVLRGEDAVESLLSRAT 518 Query: 202 DKF-------SDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM--FVAVI 252 + F D NW SD ++RI D ++ R +M A + Sbjct: 519 EAFGLSGARLMTDGKVVANWGTTSDQVTEHRIDDHTVVEFHGPEPDASERRLMSVIAAQL 578 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 GT L + A+ V V+ L + L L+++ + + Sbjct: 579 GTALEQHQLEETAKAVEPLAATDRVRTAL--LSAVGHDLRRPLAAATAAVSGLRSEWSKL 636 Query: 313 DTY--ISKSIGVEQHTAHAQLSTLINKI 338 + A +QL+ L+ + Sbjct: 637 SDQDRADLLETAD--EALSQLANLVTDL 662 >gi|159472378|ref|XP_001694328.1| predicted protein [Chlamydomonas reinhardtii] gi|158276991|gb|EDP02761.1| predicted protein [Chlamydomonas reinhardtii] Length = 823 Score = 37.0 bits (84), Expect = 4.8, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 54/149 (36%), Gaps = 11/149 (7%) Query: 211 ANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLT-------- 262 A++ S A+ ++ I + + ++ + + +FLS+ + Sbjct: 259 ADSSSGANVQLADELLRAHRTIQEAVSTSLDVATNPAVAYMQNADFLSRLMREWAVGDKA 318 Query: 263 --DGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 D A ++ V + + + LG++++ + E + + + + + + + Sbjct: 319 ALDAAIEASVSAAVALVNEAGARLQTHARDLGVAQQQLAEAQDAV-AQLRLTNGLLQQEA 377 Query: 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQ 349 + L ++++ + +LQ Sbjct: 378 DTRLAEVRGESEALRSQLDSARDQVARLQ 406 >gi|218461115|ref|ZP_03501206.1| flagellin C protein [Rhizobium etli Kim 5] Length = 215 Score = 37.0 bits (84), Expect = 4.8, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 28/75 (37%) Query: 259 KNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISK 318 +L+ +M+S V L+ + + G EK I + F ++ I I + Sbjct: 112 ISLSAATTQGQIGEMISVVDAALTQLTTVGSAFGALEKRIELQNDFAAKLHDNITAGIGR 171 Query: 319 SIGVEQHTAHAQLST 333 + + ++L Sbjct: 172 LVDADMEEEASKLKA 186 >gi|323700158|ref|ZP_08112070.1| flagellin domain protein [Desulfovibrio sp. ND132] gi|323460090|gb|EGB15955.1| flagellin domain protein [Desulfovibrio desulfuricans ND132] Length = 308 Score = 37.0 bits (84), Expect = 4.9, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 27/85 (31%) Query: 267 NVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHT 326 L + + + Q + + RA LG + + L+ + + S+ V+ Sbjct: 214 QALAQAAMEAINQAIISKDKIRANLGSMQNRLENTITNLEIQAENLQAAESRISDVDVAQ 273 Query: 327 AHAQLSTLINKIEMSYMITTKLQKL 351 + + + + + L Sbjct: 274 EMTEFVRNQILTQSAVAMLAQANSL 298 >gi|171741550|ref|ZP_02917357.1| hypothetical protein BIFDEN_00636 [Bifidobacterium dentium ATCC 27678] gi|283455120|ref|YP_003359684.1| phage-infection protein-like hypothetical membrane-spanning protein [Bifidobacterium dentium Bd1] gi|171277164|gb|EDT44825.1| hypothetical protein BIFDEN_00636 [Bifidobacterium dentium ATCC 27678] gi|283101754|gb|ADB08860.1| phage-infection protein-like hypothetical membrane-spanning protein [Bifidobacterium dentium Bd1] Length = 880 Score = 37.0 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 91/285 (31%), Gaps = 45/285 (15%) Query: 76 LSTSQAHLSSMQKIVQDMVGPLVILLEGKTD--------NNKFPINAGMLRDSYESFVTF 127 + ++A L+ +Q L TD ++ + T Sbjct: 227 IQAARAALNDVQTAAASAGKGLSGTANLITDTQTRINTFSSTASASLDQGSALLSQLSTQ 286 Query: 128 ANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSS 187 N + + S NGY S +Q +N+K L + Q +++S+ Sbjct: 287 TNTSVNT------VTSGLAAANGY--AGSAIGT-----MQKVNSDNAKVLDSLQKIDISN 333 Query: 188 MNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM 247 ++ + + + + D S + AN ++ + N + +S N Sbjct: 334 VSPELNKQYQQIISDLQSRNRQSANTLNDLNQLNTDTKNTVAGTTKLSNQFN-------- 385 Query: 248 FVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQN 307 + + N ARN + L + GLS + L + + + Q Sbjct: 386 -----TSAQSTLNSATDARNAINSSALPQLNSGLSSLAATAGTLSGT---VTSQNFLTQQ 437 Query: 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLS 352 ++++D V + L +++ I KL +LS Sbjct: 438 TSSVLDQ----LERV-SADTRSMLKDTDEQLQT---IENKLGQLS 474 >gi|291520247|emb|CBK75468.1| Flagellin and related hook-associated proteins [Butyrivibrio fibrisolvens 16/4] Length = 535 Score = 37.0 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 40/115 (34%), Gaps = 1/115 (0%) Query: 220 HNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQ 279 I + + D + + N + +V TEF+ + D R + + ++ Sbjct: 396 GEITFNVTDIGSMALQVGANEGQSMKVRIASV-STEFMYIDDVDVTRAQGPEDAMDALES 454 Query: 280 GLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTL 334 L + R+ LG E + L + + IS+ + T + + L Sbjct: 455 ALGYVTTVRSQLGAYENRLEHTTKSLDATEENMTSAISRVEDADMATTMVEYTKL 509 >gi|256830169|ref|YP_003158897.1| flagellar hook-associated protein 3 [Desulfomicrobium baculatum DSM 4028] gi|256579345|gb|ACU90481.1| flagellar hook-associated protein 3 [Desulfomicrobium baculatum DSM 4028] Length = 594 Score = 37.0 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 32/86 (37%) Query: 272 KMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQL 331 + L ++ G Q A +G E ++ L +S + T +L Sbjct: 509 EALDGLKTGHQYFTTQLASVGARENRLDVADTVLSGLKLNETERMSNVEDADLATLLTEL 568 Query: 332 STLINKIEMSYMITTKLQKLSILNYL 357 + E ++ + K+S++NYL Sbjct: 569 ANQQLSYEAVLKSSSMIMKMSLVNYL 594 >gi|313650463|gb|EFS14870.1| flagellar hook-associated protein 3 [Shigella flexneri 2a str. 2457T] gi|332759625|gb|EGJ89930.1| flagellar hook-associated protein 3 [Shigella flexneri 2747-71] gi|332761431|gb|EGJ91715.1| flagellar hook-associated protein 3 [Shigella flexneri K-671] gi|332767693|gb|EGJ97886.1| flagellar hook-associated protein FlgL [Shigella flexneri 2930-71] gi|333019322|gb|EGK38605.1| flagellar hook-associated protein 3 [Shigella flexneri K-304] Length = 183 Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 40/132 (30%), Gaps = 6/132 (4%) Query: 226 IKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGL---- 281 I + + + + + + A + L +GL Sbjct: 49 ITSNAVAEPDGSASETNL--FAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL 106 Query: 282 SGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMS 341 + ++ RA LG + ++ +S + V+ + + ++ S Sbjct: 107 NNVLTVRAELGTQLNKLESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQAS 166 Query: 342 YMITTKLQKLSI 353 Y T +Q LS+ Sbjct: 167 YKAFTDMQGLSL 178 >gi|313771209|gb|EFS37175.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL074PA1] gi|313811898|gb|EFS49612.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL083PA1] gi|313832089|gb|EFS69803.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL007PA1] gi|313832893|gb|EFS70607.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL056PA1] gi|313839753|gb|EFS77467.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL086PA1] gi|314975327|gb|EFT19422.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL053PA1] gi|314977743|gb|EFT21838.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL045PA1] gi|314985282|gb|EFT29374.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL005PA1] gi|327332627|gb|EGE74362.1| sensor histidine kinase KdpD [Propionibacterium acnes HL096PA2] gi|327446590|gb|EGE93244.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL043PA2] gi|327448968|gb|EGE95622.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL043PA1] gi|328759712|gb|EGF73309.1| sensor histidine kinase KdpD [Propionibacterium acnes HL099PA1] Length = 822 Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 38/268 (14%) Query: 99 ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSL- 157 L + ++ ++ S + Y F KP + L Sbjct: 397 ALTTDVLAYELLAVVVALVGGAFSSLIAALASGFALDYFF------TKPFYTVTVNEPLH 450 Query: 158 -------------AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN---AQQMTDFIKQLE 201 D+ + + +G V+ + + + + Sbjct: 451 LVALLLYLLTAALVSVVVDRAARKTRVARRAAAESGLLQSVAGLVLRGEDAVESLLSRAT 510 Query: 202 DKF-------SDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM--FVAVI 252 + F D NW SD ++RI D ++ R +M A + Sbjct: 511 EAFGLSGARLMTDGKVVANWGTTSDQVTEHRIDDHTVVEFHGPEPDASERRLMSVIAAQL 570 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 GT L + A+ V V+ L + L L+++ + + Sbjct: 571 GTALEQHQLEETAKAVEPLAATDRVRTAL--LSAVGHDLRRPLAAATAAVSGLRSEWSKL 628 Query: 313 DTY--ISKSIGVEQHTAHAQLSTLINKI 338 + A +QL+ L+ + Sbjct: 629 SDQDRADLLETAD--EALSQLANLVTDL 654 >gi|115660760|ref|XP_791258.2| PREDICTED: similar to RecA homolog Dmc1 [Strongylocentrotus purpuratus] gi|115971203|ref|XP_001184102.1| PREDICTED: similar to RecA homolog Dmc1 [Strongylocentrotus purpuratus] Length = 1259 Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 99/294 (33%), Gaps = 31/294 (10%) Query: 54 EWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPIN 113 E N + NS++ RLS Q L+ ++K + + L +T + + Sbjct: 592 ELRTAVNQLMS-TDINSILE-RLSQLQTRLNGLEKDSSQLQLNVNTLQSSRTVVQQGDTD 649 Query: 114 AGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEEN 173 A + + + N Q F+ + + + T+ K S Q Q + Sbjct: 650 AAVNTGAIDVLQANLN-KLGSQ--FASLQTDIASIQLKVTE---LKTSVSQTTQTVDIHS 703 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 +K L + + + + S+ + +++ + D N+ D + Sbjct: 704 AKLLALSRSISA-------LEKSLNGSVVMLSEADGTSHSLISIRDMNVLKEEMDAVHVA 756 Query: 234 VSANVNMRGIRDIMFVAVIGTEFL-----SKNLTDGARNVLTKKMLSTVQQGLSGIIEQR 288 +S N + ++ +E ++L V + L+++ + + + + Sbjct: 757 ISKLQNELAGETASGITIVNSEINLLSSKLEHLEGRLDEVKLEASLASLDDAIRDVTQGQ 816 Query: 289 AVLGISEKNINEERVFLQNKNNIIDT---YISKSIGVEQHTAHAQLSTLINKIE 339 A L + + ++ + + + +S +L+ L + I+ Sbjct: 817 AGLQDNVVRLQFNTDLIKKQTSRANGDTIQLSVLE--------TRLNDLASSIQ 862 >gi|315097032|gb|EFT69008.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL038PA1] Length = 822 Score = 36.6 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 38/268 (14%) Query: 99 ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSL- 157 L + ++ ++ S + Y F KP + L Sbjct: 397 ALTTDVLAYELLAVVVALVGGAFSSLIAALASGFALDYFF------TKPFYTVTVNEPLH 450 Query: 158 -------------AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN---AQQMTDFIKQLE 201 D+ + + +G V+ + + + + Sbjct: 451 LVALLLYLLTAALVSVVVDRAARKTRVARRAAAESGLLQSVAGLVLRGEDAVESLLSRAT 510 Query: 202 DKF-------SDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM--FVAVI 252 + F D NW SD ++RI D ++ R +M A + Sbjct: 511 EAFGLSGARLMTDGKVVANWGTTSDQVTEHRIDDHTVVEFHGPEPDASERRLMSVIAAQL 570 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 GT L + A+ V V+ L + L L+++ + + Sbjct: 571 GTALEQHQLEETAKAVEPLAATDRVRTAL--LSAVGHDLRRPLAAATAAVSGLRSEWSKL 628 Query: 313 DTY--ISKSIGVEQHTAHAQLSTLINKI 338 + A +QL+ L+ + Sbjct: 629 SDQDRADLLETAD--EALSQLANLVTDL 654 >gi|158424323|ref|YP_001525615.1| flagellin [Azorhizobium caulinodans ORS 571] gi|158331212|dbj|BAF88697.1| flagellin [Azorhizobium caulinodans ORS 571] Length = 353 Score = 36.6 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 94/352 (26%), Gaps = 11/352 (3%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T++ + +N ++ + TG+ + A + + Sbjct: 2 TSIITNNAASVALATLRSINDSLNTTNDRVSTGKKINSAADGAAYWNISTTLTSDNGALG 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + +L + T+ L+ + + + LV D N S Sbjct: 62 AVKDAINLDMSSVKTTNTGLTQIMNSLNTIKQALVSAQSSTADRTSLQKNIANAVSDISS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 + A + + S A A + Sbjct: 122 AASSAVVNGANWLSVDSSATGFNANKSLLANFSRASGVVTVGTTTLDTGAFAVYDAKTNG 181 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + ++ I + + ++K S + + G Sbjct: 182 TATGTSST-----IDTAVTAVATSASSGTGALTVAVGTGAGQLKGFMDTTYSISGTVNGT 236 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 F A I +S + + V + G+ LG ++ + ++ Sbjct: 237 TVAAFTASIANIDISSLTSSDVDLAKLSSYMKIVSATIDGLQAGSTALGTTQTRLTSQQN 296 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F Q+ +I + I + +L L + +++ +Q LSI N Sbjct: 297 FAQSLIDINTSSIGSLVDANMEEESTKLKALQTQQQLA------VQSLSIAN 342 >gi|183983858|ref|YP_001852149.1| bacteriophage membrane protein [Mycobacterium marinum M] gi|183177184|gb|ACC42294.1| conserved hypothetical bacteriophage membrane protein [Mycobacterium marinum M] Length = 1193 Score = 36.6 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 20/204 (9%), Positives = 49/204 (24%), Gaps = 19/204 (9%) Query: 42 GLQLGARVTSILEWEQEKNHIAERLHSN--SLVTKRLSTSQAHLSSMQKIVQDMVGPLVI 99 GL L A ++ +N SLV+ + S + ++ + + L + Sbjct: 516 GLSLAAEAADNFT-----ALLSGLSLANITSLVSFLDTASSNAVDAIGALGDLVANALQV 570 Query: 100 LLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAK 159 D L N + +N+ + + ++ Sbjct: 571 ------DAAGVGTLIASLLTMLTQISDIFNGSVVTP-----VNTVVQQIKDWWAATGENI 619 Query: 160 KSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASD 219 + + + ++L + + + A + + W W A Sbjct: 620 PNAISDVGTIISSAGQTLASAVGTAIQNAGAALDDVKNNVIGGATNAVTVWGQAWEGAFA 679 Query: 220 HNIKYRIKDTEGIDVSANVNMRGI 243 I + Sbjct: 680 GFFNS-ISGASVAAAQTGQVSSAM 702 >gi|206970882|ref|ZP_03231834.1| putative flagellar hook-associated protein FlgL [Bacillus cereus AH1134] gi|229078921|ref|ZP_04211473.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock4-2] gi|229178148|ref|ZP_04305519.1| Flagellar hook-associated protein 3 [Bacillus cereus 172560W] gi|206734518|gb|EDZ51688.1| putative flagellar hook-associated protein FlgL [Bacillus cereus AH1134] gi|228605278|gb|EEK62728.1| Flagellar hook-associated protein 3 [Bacillus cereus 172560W] gi|228704335|gb|EEL56769.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock4-2] Length = 287 Score = 36.6 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + V L + + + V Sbjct: 63 QKDLADSKNVLTQTENTLQGIFKSLTRADQLTVQALNEPNGEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 123 YLANTKEQGRYIFGGDSAEKSPFTEDGT 150 >gi|327444731|gb|EGE91385.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL013PA2] Length = 822 Score = 36.6 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 38/268 (14%) Query: 99 ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSL- 157 L + ++ ++ S + Y F KP + L Sbjct: 397 ALTTDVLAYELLAVVVALVGGAFSSLIAALASGFALDYFF------TKPFYTVTVNEPLH 450 Query: 158 -------------AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN---AQQMTDFIKQLE 201 D+ + + +G V+ + + + + Sbjct: 451 LVALLLYLLTAALVSVVVDRAARKTRVARRAAAESGLLQSVAGLVLRGEDAVESLLSRAT 510 Query: 202 DKF-------SDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM--FVAVI 252 + F D NW SD ++RI D ++ R +M A + Sbjct: 511 EAFGLSGARLMTDGKVVANWGTTSDQATEHRIDDHTVVEFHGPEPDASERRLMSVIAAQL 570 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 GT L + A+ V V+ L + L L+++ + + Sbjct: 571 GTALEQHQLEETAKAVEPLAATDRVRTAL--LSAVGHDLRRPLAAATAAVSGLRSEWSKL 628 Query: 313 DTY--ISKSIGVEQHTAHAQLSTLINKI 338 + A +QL+ L+ + Sbjct: 629 SDQDRADLLETAD--EALSQLANLVTDL 654 >gi|217031519|ref|ZP_03437024.1| hypothetical protein HPB128_21g77 [Helicobacter pylori B128] gi|216946719|gb|EEC25315.1| hypothetical protein HPB128_21g77 [Helicobacter pylori B128] Length = 689 Score = 36.6 bits (83), Expect = 5.6, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 257 LSKNLTDGARNVLTKKMLST---VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIID 313 L + RN+ + ++ + + +I + G + +NI L+ + I Sbjct: 589 LGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLKTQVQSIR 648 Query: 314 TYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ++ G + + + S L N T K+ LS+ YL Sbjct: 649 G---ETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL 689 >gi|170761749|ref|YP_001788046.1| flagellin [Clostridium botulinum A3 str. Loch Maree] gi|169408738|gb|ACA57149.1| flagellin [Clostridium botulinum A3 str. Loch Maree] Length = 279 Score = 36.6 bits (83), Expect = 5.6, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 33/101 (32%), Gaps = 4/101 (3%) Query: 227 KDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKN----LTDGARNVLTKKMLSTVQQGLS 282 + + N + A+ + + + KM+ T+ + ++ Sbjct: 142 GAGKELTFQIGANSGQTIQLAISAMSVGALGVASDKVTIGSAKKASEITKMIETIDKAIN 201 Query: 283 GIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE 323 + +RA LG ++ + L N + S+ V+ Sbjct: 202 TVSGERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVD 242 >gi|50841609|ref|YP_054836.1| two-component sensor, KdpD [Propionibacterium acnes KPA171202] gi|50839211|gb|AAT81878.1| two-component sensor, KdpD [Propionibacterium acnes KPA171202] gi|332674520|gb|AEE71336.1| sensor protein KdpD [Propionibacterium acnes 266] Length = 830 Score = 36.6 bits (83), Expect = 5.6, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 38/268 (14%) Query: 99 ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSL- 157 L + ++ ++ S + Y F KP + L Sbjct: 405 ALTTDVLAYELLAVVVALVGGAFSSLIAALASGFALDYFF------TKPFYTVTVNEPLH 458 Query: 158 -------------AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN---AQQMTDFIKQLE 201 D+ + + +G V+ + + + + Sbjct: 459 LVALLLYLLTAALVSVVVDRAARKTRVARRAAAESGLLQSVAGLVLRGEDAVESLLSRAT 518 Query: 202 DKF-------SDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM--FVAVI 252 + F D NW SD ++RI D ++ R +M A + Sbjct: 519 EAFGLSGARLMTDGKVVANWGTTSDQVTEHRIDDHTVVEFHGPEPDASERRLMSVIAAQL 578 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 GT L + A+ V V+ L + L L+++ + + Sbjct: 579 GTALEQHQLEETAKAVEPLAATDRVRTAL--LSAVGHDLRRPLAAATAAVSGLRSEWSKL 636 Query: 313 DTY--ISKSIGVEQHTAHAQLSTLINKI 338 + A +QL+ L+ + Sbjct: 637 SDQDRADLLETAD--EALSQLANLVTDL 662 >gi|282919146|ref|ZP_06326881.1| hypothetical protein SASG_00452 [Staphylococcus aureus subsp. aureus C427] gi|282316956|gb|EFB47330.1| hypothetical protein SASG_00452 [Staphylococcus aureus subsp. aureus C427] Length = 5327 Score = 36.6 bits (83), Expect = 5.7, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 1039 TNAVTNAQGILDKAHGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 1098 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++ ++ QD+ G + L + ++ + + Sbjct: 1099 LNNAQKQDLTSQIEGATTVNGVNGVKTKAQDLDGAMQRLQSAIANKDQTKASENYIDADP 1158 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 1159 TNKTAFDNAITQAESYLNKDH---GANKDKQAVEQAIQSVTSTENALNGDANLQRAKTEA 1215 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ HL A + Q +D + A + +NA D +K I D + I Sbjct: 1216 TQAIDNLTHLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIADHDTIV 1274 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V +G+ Sbjct: 1275 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETGLNG-DTN 1333 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 1334 LATAKQQAKDALRQMTHLSDAQKQSITVQIDNATQVTGVQSVKDNATNLDNAMNQLRNSI 1393 Query: 343 M 343 Sbjct: 1394 A 1394 >gi|221199747|ref|ZP_03572790.1| flagellar hook-associated protein 3 [Burkholderia multivorans CGD2M] gi|221208648|ref|ZP_03581648.1| flagellar hook-associated protein 3 [Burkholderia multivorans CGD2] gi|221171459|gb|EEE03906.1| flagellar hook-associated protein 3 [Burkholderia multivorans CGD2] gi|221179986|gb|EEE12390.1| flagellar hook-associated protein 3 [Burkholderia multivorans CGD2M] Length = 411 Score = 36.6 bits (83), Expect = 5.7, Method: Composition-based stats. Identities = 40/366 (10%), Positives = 98/366 (26%), Gaps = 57/366 (15%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 ++ +++ + ++ L L+S+ ++ + ++ +G + Sbjct: 45 GAAQAVQLSMTSATLSQYATNQNVALSSLQKEDQALTSVNSLLNSIHSIVIRAGDGALSD 104 Query: 108 NKFPINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFT------------- 153 + A L+ + +T AN TD G YLF+G S+ P Sbjct: 105 SDRSALATQLQGYRDQLLTLANSTDGAGNYLFAGYQSTTAPFANGTGGGVVYSGDRGARQ 164 Query: 154 ---KDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYW 210 D+ D FL ++ + ++ + Sbjct: 165 VQIADTRTIAQGDDGASVFLSVPMLGSQPVPAAGAANQGTATIGAVTITDPSAATNTHTF 224 Query: 211 ANNWSNAS-----------------------------------DHNIKYRIKDTEGIDVS 235 + S + + V Sbjct: 225 TITFGGTSAAPTYTVTDETAAPPTTTAPQPYADGTAIALGNGLSVPVSGTPSPNDTFSV- 283 Query: 236 ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLST----VQQGLSGIIEQRAVL 291 G + + +D ++T + ++ I+ +A + Sbjct: 284 TPAPQAGTDVFATLDTMIAALKVPIGSDTVAAAKLANAMTTGTTKLDNTMTNILTVQASV 343 Query: 292 GISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 G E+ I + Q + + ++ + +Q + N + + +LQ L Sbjct: 344 GGREQEIQAMQAVNQTNTLQVTSNLADLTSTNMVSTISQFLQMQNALTGAQKAYAQLQNL 403 Query: 352 SILNYL 357 S+ Y+ Sbjct: 404 SLFQYI 409 >gi|229090700|ref|ZP_04221933.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock3-42] gi|228692642|gb|EEL46368.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock3-42] Length = 287 Score = 36.6 bits (83), Expect = 5.7, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 50/148 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + +I + Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + ++ L + + + + V Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLMLQALSEQNGEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 123 YLANTKEQGRYIFGGDSAEKPPFTEDGT 150 >gi|328542112|ref|YP_004302221.1| flagellin-like protein [polymorphum gilvum SL003B-26A1] gi|326411862|gb|ADZ68925.1| Flagellin-like protein [Polymorphum gilvum SL003B-26A1] Length = 371 Score = 36.6 bits (83), Expect = 5.8, Method: Composition-based stats. Identities = 38/350 (10%), Positives = 99/350 (28%), Gaps = 20/350 (5%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 + ++ + + L S + + Q +D G LG + + + Sbjct: 25 SLTVASGLKLDIASLRAASANISQAASMLQIADGG--LGQIGDILGRMQTLASTAQSDQI 82 Query: 68 SNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAG-----MLRDSYE 122 SN+ + ++ + +I + LL G T D + Sbjct: 83 SNTERGFINTEYSNLVNEVTRIANATEYNGIELLSGTTGVGASLETNAIGTNVEAADGFV 142 Query: 123 SFVTFANMTDEGQYLFSGI--NSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + AN +G+ + N++ + A + L F Sbjct: 143 ALTFDANKRADGEAVTIAFDENTNVFTVTALDGAGGNALVAQSLDLDDFGGAIPDGQTVD 202 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 + + + DF +++ N + + +++ ++AN+N Sbjct: 203 LNFADVGVTIRLSADFDDTAAINANNEVTIQNAAAGQQGTQLVFKVGVAATDTITANING 262 Query: 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINE 300 L + T V ++ ++ S I RA LG ++ Sbjct: 263 S-----------TAGQLGIDATSVTTRVNADAAVTAIETAQSRINSNRANLGALMSRLDF 311 Query: 301 ERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 + + ++ S + + ++ ++ + + + Sbjct: 312 ANANVGIQIENMEAARSTLQDTDVAEEMTRFTSQQVLVQAGVSMLAQANQ 361 >gi|254445980|ref|ZP_05059456.1| Bacterial flagellin C-terminus domain protein [Verrucomicrobiae bacterium DG1235] gi|198260288|gb|EDY84596.1| Bacterial flagellin C-terminus domain protein [Verrucomicrobiae bacterium DG1235] Length = 390 Score = 36.6 bits (83), Expect = 5.8, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 50/140 (35%) Query: 195 DFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGT 254 F + ++ E +++S+A+ + G+ S + + R++ G Sbjct: 225 TFDLATDGTMANLELDGSDFSSATGTVSTASGDISFGLSESGSGDGVEFRNLSVSPQSGV 284 Query: 255 EFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDT 314 S + + L + TV+ + + RA G + +N + L ++ Sbjct: 285 SSSSSVGSVASTADLDSVDIETVKDAIGEVATFRAQNGAQQSRLNFAQEQLNTNRVNLEA 344 Query: 315 YISKSIGVEQHTAHAQLSTL 334 S+ + V+ L+ L Sbjct: 345 AKSRIMDVDVAAESTNLARL 364 >gi|254993615|ref|ZP_05275805.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL J2-064] Length = 154 Score = 36.6 bits (83), Expect = 5.9, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 7/160 (4%) Query: 198 KQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFL 257 F+ D+ N + N K+R+ T+ ++V + + D+ + + Sbjct: 2 STSVKPFTTDKTTGEIIYNGTTENKKFRV--TDTLEVEVFHDGSAMTDVFNNIQKIVDAM 59 Query: 258 SKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYIS 317 A + L T + + I +G + + L +K S Sbjct: 60 KTG-DKDALSAL----QETNSKNIEIITNSMTNIGGQKNGVAAYDNVLSSKIVDFSERKS 114 Query: 318 KSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 V A + L+ + + + +QKLSILNY+ Sbjct: 115 NVEEVNMPEAVSNLNKTSIAYQAALQSSVMVQKLSILNYM 154 >gi|218678702|ref|ZP_03526599.1| flagellin C protein [Rhizobium etli CIAT 894] Length = 189 Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 61/141 (43%), Gaps = 16/141 (11%) Query: 216 NASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVI-GTEFLSKNLTDGARNVLTKKML 274 +S N+ + + T ID ++ + I + + + F S ++ L Sbjct: 52 TSSSGNVLFGMTSTGTIDTTSGIIGTSYGTIGSIYSMDISTFGSVEISM---------AL 102 Query: 275 STVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTL 334 ++++ GL+ + + + LG I+ + F+ ++ ID+ + + + ++L+ L Sbjct: 103 TSIEAGLNAMTKAASQLGSISTRIDLQENFVGALSDSIDSGVGRLVDANMEEESSKLTAL 162 Query: 335 INKIEMSYMITTKLQKLSILN 355 + +++ +Q LSI N Sbjct: 163 QTQQQLA------IQSLSIAN 177 >gi|313806989|gb|EFS45487.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL087PA2] Length = 822 Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 38/268 (14%) Query: 99 ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSL- 157 L + ++ ++ S + Y F KP + L Sbjct: 397 ALTTDVLAYELLAVVVALVGGAFSSLIAALASGFALDYFF------TKPFYTVTVNEPLH 450 Query: 158 -------------AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN---AQQMTDFIKQLE 201 D+ + + +G V+ + + + + Sbjct: 451 LVALLLYLLTAALVSVVVDRAARKTRVARRAAAESGLLQSVAGLVLRGEDAVESLLSRAT 510 Query: 202 DKF-------SDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM--FVAVI 252 + F D NW SD ++RI D ++ R +M A + Sbjct: 511 EAFGLSGARLMTDGKVVANWGTTSDQVTEHRIDDHTVVEFHGPEPDASERRLMSVIAAQL 570 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 GT L + A+ V V+ L + L L+++ + + Sbjct: 571 GTALEQHQLEETAKAVEPLAATDRVRTAL--LSAVGHDLRRPLAAATAAVSGLRSEWSKL 628 Query: 313 DTY--ISKSIGVEQHTAHAQLSTLINKI 338 + A +QL+ L+ + Sbjct: 629 SDQDRADLLETAD--EALSQLANLVTDL 654 >gi|218677522|ref|ZP_03525419.1| flagellin C protein [Rhizobium etli CIAT 894] Length = 302 Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + L+ V+ L + A LG K I + F+ ++ ID+ + + + + + Sbjct: 211 IQSALTNVESALKSMTSAGAALGSVSKRIELQENFVSALSDSIDSGVGRLVDADMEEESS 270 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +LS L + +++ +Q LSI N Sbjct: 271 KLSALQTQQQLA------VQSLSIAN 290 >gi|15924424|ref|NP_371958.1| hypothetical protein SAV1434 [Staphylococcus aureus subsp. aureus Mu50] gi|156979753|ref|YP_001442012.1| hypothetical protein SAHV_1422 [Staphylococcus aureus subsp. aureus Mu3] gi|81774911|sp|Q931R6|EBHA_STAAM RecName: Full=Extracellular matrix-binding protein ebhA; AltName: Full=ECM-binding protein homolog A gi|205716440|sp|A7X2C3|EBHA_STAA1 RecName: Full=Extracellular matrix-binding protein ebhA; AltName: Full=ECM-binding protein homolog A gi|14247205|dbj|BAB57596.1| hypothetical protein ebhA [Staphylococcus aureus subsp. aureus Mu50] gi|156721888|dbj|BAF78305.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] Length = 6713 Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 110/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 2425 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 2484 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++S++ QD+ G + L + ++ + + Sbjct: 2485 LNNAQKQDLTSQIEGATTVNGVNSVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 2544 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 2545 TKKTAFDNAITQAESYLNKDH---GTNKDKQAVEQAIQSVTSTENALNGDANLQCAKTEA 2601 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ L A + Q +D + A + +NA D +K I D + I Sbjct: 2602 TQAIDNLTQLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIGDHDTIV 2660 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V + + Sbjct: 2661 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETSLNG-DTN 2719 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 2720 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 2779 Query: 343 M 343 Sbjct: 2780 A 2780 >gi|260662366|ref|ZP_05863261.1| LOW QUALITY PROTEIN: yhgE protein [Lactobacillus fermentum 28-3-CHN] gi|260553057|gb|EEX26000.1| LOW QUALITY PROTEIN: yhgE protein [Lactobacillus fermentum 28-3-CHN] Length = 483 Score = 36.6 bits (83), Expect = 6.1, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 54/162 (33%), Gaps = 3/162 (1%) Query: 45 LGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGK 104 LG ++ + + + +L++ + + LS +Q L+ +++ + G L Sbjct: 18 LGTALSQVNSLSTSLSGLQSQLNNLASLQTTLSGAQTTLNQANQLLTTLQGYQGALSAMP 77 Query: 105 TDNNKFPINAGMLRDSYESFVTFANMTDEG--QYLFSGINSSEKPLNGYFTKDSLAKKSF 162 + L S + + G QY +G++++ + + Sbjct: 78 SQLAALKQATNSLASGAASLQSGMSTAQAGINQYT-AGVDTAASGASQLSANSASLTNGA 136 Query: 163 DQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKF 204 +Q+ G + + A + N+ + QL Sbjct: 137 NQLQSGVSQYTAGVNQANAGTGQLTANSAALVSGANQLATAL 178 >gi|255034578|ref|YP_003085199.1| TonB-dependent receptor plug [Dyadobacter fermentans DSM 18053] gi|254947334|gb|ACT92034.1| TonB-dependent receptor plug [Dyadobacter fermentans DSM 18053] Length = 1181 Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 10/107 (9%) Query: 33 MVTGQ-SSDYGLQLGARVTSILEWEQEKNHIAERLHS-NSLVTKRLSTSQAHLSSMQKIV 90 + TG SD GL + Q N+ N V + +++ Q Sbjct: 636 VSTGTAFSDQGL--------SWLFNQTLNYSKSLRDVHNFDVLIGMESTRFQFQESQGTG 687 Query: 91 QDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 +V L G + + L ++ S+ AN +G+YL Sbjct: 688 SSFPNDVVETLNGSASGSTTTAVSQRLENASASYFARANYNYKGKYL 734 >gi|218896671|ref|YP_002445082.1| putative flagellar hook-associated protein FlgL [Bacillus cereus G9842] gi|228900320|ref|ZP_04064550.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis IBL 4222] gi|218542219|gb|ACK94613.1| putative flagellar hook-associated protein FlgL [Bacillus cereus G9842] gi|228859355|gb|EEN03785.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis IBL 4222] Length = 287 Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 50/148 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + ++ + Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + +V L + + + + V Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRTDQLMVQALSEQNGEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 123 YLANTKEQGRYIFGGDSAEKLPFTEDGT 150 >gi|313814093|gb|EFS51807.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL025PA1] gi|313817773|gb|EFS55487.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL046PA2] gi|313821401|gb|EFS59115.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL036PA1] gi|313824654|gb|EFS62368.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL036PA2] gi|313826323|gb|EFS64037.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL063PA1] gi|314926442|gb|EFS90273.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL036PA3] gi|314961461|gb|EFT05562.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL002PA2] gi|314980123|gb|EFT24217.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL072PA2] gi|314986977|gb|EFT31069.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL005PA2] gi|314990528|gb|EFT34619.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL005PA3] gi|315081719|gb|EFT53695.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL078PA1] gi|315082907|gb|EFT54883.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL027PA2] gi|315086742|gb|EFT58718.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL002PA3] gi|315088145|gb|EFT60121.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL072PA1] gi|327333804|gb|EGE75521.1| sensor histidine kinase KdpD [Propionibacterium acnes HL096PA3] gi|328757845|gb|EGF71461.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL020PA1] Length = 822 Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 38/268 (14%) Query: 99 ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSL- 157 L + ++ ++ S + Y F KP + L Sbjct: 397 ALTTDVLAYELLAVVVALVGGAFSSLIAALASGFALDYFF------TKPFYTVTVNEPLH 450 Query: 158 -------------AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN---AQQMTDFIKQLE 201 D+ + + +G V+ + + + + Sbjct: 451 LVALLLYLLTAALVSVVVDRAARKTRVARRAAAESGLLQSVAGLVLRGEDAVESLLSRAT 510 Query: 202 DKF-------SDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM--FVAVI 252 + F D NW SD ++RI D ++ R +M A + Sbjct: 511 EAFGLSGARLMTDGKVVANWGTTSDQVTEHRIDDHTVVEFHGPEPDASERRLMSVIAAQL 570 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 GT L + A+ V V+ L + L L+++ + + Sbjct: 571 GTALEQHQLEETAKAVEPLAATDRVRTAL--LSAVGHDLRRPLAAATAAVSGLRSEWSKL 628 Query: 313 DTY--ISKSIGVEQHTAHAQLSTLINKI 338 + A +QL+ L+ + Sbjct: 629 SDQDRADLLETAD--EALSQLANLVTDL 654 >gi|302384366|ref|YP_003820189.1| OAR protein precursor [Brevundimonas subvibrioides ATCC 15264] gi|302194994|gb|ADL02566.1| OAR protein precursor [Brevundimonas subvibrioides ATCC 15264] Length = 1134 Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 35/118 (29%), Gaps = 4/118 (3%) Query: 102 EGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKS 161 G T G+ + + FV N + GI + KP+ L Sbjct: 312 TGPTGGGFANDINGITQADLDGFVNQFNTVYASDFEVGGI-TRTKPITDEKYTGKLDWNI 370 Query: 162 FDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSD---DEYWANNWSN 216 D +++S L + + ++ +D + W +N+S Sbjct: 371 TDSQRLSLTYRHAESGLIQRTNLSRTSAGFDSQWYLTGEDDTAYAAELNSQWTDNFST 428 >gi|229096225|ref|ZP_04227198.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock3-29] gi|228687185|gb|EEL41090.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock3-29] Length = 287 Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats. Identities = 24/204 (11%), Positives = 67/204 (32%), Gaps = 2/204 (0%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + ++ + Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + V L + + + V Sbjct: 63 QKDLADSKNVLTQTENTLQGIFKSLTRADQLTVQALNEPNGEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEV 185 AN ++G+Y+F G ++ ++P T Q+ G+ + ++ A + Sbjct: 123 YLANTKEQGRYIFGGDSAEKQPFTEDGTYQGGKNDVNWQLNDGYELKAFRNGEALLSPVI 182 Query: 186 SSMN--AQQMTDFIKQLEDKFSDD 207 ++ ++ M ++ S + Sbjct: 183 KTLKQMSEAMQKGDQKALQPLSGE 206 >gi|315107592|gb|EFT79568.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL030PA1] Length = 822 Score = 36.6 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 38/268 (14%) Query: 99 ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSL- 157 L + ++ ++ S + Y F KP + L Sbjct: 397 ALTTDVLAYELLAVVVALVGGAFSSLIAALASGFALDYFF------TKPFYTVTVNEPLH 450 Query: 158 -------------AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN---AQQMTDFIKQLE 201 D+ + + +G V+ + + + + Sbjct: 451 LVALLLYLLTAALVSVVVDRAARKTRVARRAAAESGLLQSVAGLVLRGEDAVESLLSRAT 510 Query: 202 DKF-------SDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM--FVAVI 252 + F D NW SD ++RI D ++ R +M A + Sbjct: 511 EAFGLSGARLMTDGKVVANWGTTSDQVTEHRIDDHTVVEFHGPEPDASERRLMSVIAAQL 570 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 GT L + A+ V V+ L + L L+++ + + Sbjct: 571 GTALEQHQLEETAKAVEPLAATDRVRTAL--LSAVGHDLRRPLAAATAAVSGLRSEWSKL 628 Query: 313 DTY--ISKSIGVEQHTAHAQLSTLINKI 338 + A +QL+ L+ + Sbjct: 629 SDQDRADLLETAD--EALSQLANLVTDL 654 >gi|289427484|ref|ZP_06429197.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Propionibacterium acnes J165] gi|289159414|gb|EFD07605.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Propionibacterium acnes J165] Length = 830 Score = 36.6 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 38/268 (14%) Query: 99 ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSL- 157 L + ++ ++ S + Y F KP + L Sbjct: 405 ALTTDVLAYELLAVVVALVGGAFSSLIAALASGFALDYFF------TKPFYTVTVNEPLH 458 Query: 158 -------------AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN---AQQMTDFIKQLE 201 D+ + + +G V+ + + + + Sbjct: 459 LVALLLYLLTAALVSVVVDRAARKTRVARRAAAESGLLQSVAGLVLRGEDAVESLLSRAT 518 Query: 202 DKF-------SDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM--FVAVI 252 + F D NW SD ++RI D ++ R +M A + Sbjct: 519 EAFGLSGARLMTDGKVVANWGTTSDQVTEHRIDDHTVVEFHGPEPDASERRLMSVIAAQL 578 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 GT L + A+ V V+ L + L L+++ + + Sbjct: 579 GTALEQHQLEETAKAVEPLAATDRVRTAL--LSAVGHDLRRPLAAATAAVSGLRSEWSKL 636 Query: 313 DTY--ISKSIGVEQHTAHAQLSTLINKI 338 + A +QL+ L+ + Sbjct: 637 SDQDRADLLETAD--EALSQLANLVTDL 662 >gi|289424549|ref|ZP_06426332.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Propionibacterium acnes SK187] gi|289155246|gb|EFD03928.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Propionibacterium acnes SK187] Length = 830 Score = 36.6 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 38/268 (14%) Query: 99 ILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSL- 157 L + ++ ++ S + Y F KP + L Sbjct: 405 ALTTDVLAYELLAVVVALVGGAFSSLIAALASGFALDYFF------TKPFYTVTVNEPLH 458 Query: 158 -------------AKKSFDQMLQGFLEENSKSLLAGQHLEVSSMN---AQQMTDFIKQLE 201 D+ + + +G V+ + + + + Sbjct: 459 LVALLLYLLTAALVSVVVDRAARKTRVARRAAAESGLLQSVAGLVLRGEDAVESLLSRAT 518 Query: 202 DKF-------SDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIM--FVAVI 252 + F D NW SD ++RI D ++ R +M A + Sbjct: 519 EAFGLSGARLMTDGKVVANWGTTSDQVTEHRIDDHTVVEFHGPEPDASERRLMSVIAAQL 578 Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 GT L + A+ V V+ L + L L+++ + + Sbjct: 579 GTALEQHQLEETAKAVEPLAATDRVRTAL--LSAVGHDLRRPLAAATAAVSGLRSEWSKL 636 Query: 313 DTY--ISKSIGVEQHTAHAQLSTLINKI 338 + A +QL+ L+ + Sbjct: 637 SDQDRADLLETAD--EALSQLANLVTDL 662 >gi|255262022|ref|ZP_05341364.1| flagellin protein [Thalassiobium sp. R2A62] gi|255104357|gb|EET47031.1| flagellin protein [Thalassiobium sp. R2A62] Length = 423 Score = 36.6 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 52/380 (13%), Positives = 104/380 (27%), Gaps = 69/380 (18%) Query: 18 LTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLS 77 K +N D K + TG+ A E + S SL ++ Sbjct: 16 TLKSINSDLGKTQSMISTGKEVASAKDNAAVWAISKTMEADVKGFKAISDSLSLGQSTVA 75 Query: 78 TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYL 137 + ++ ++ D+ G +V E D K + L + +S V A GQ L Sbjct: 76 VGRNAAETVTDLLTDIKGKIVAAQEENVDRGKLQTDISALTEQIKSVVGAA--QFNGQNL 133 Query: 138 FSGINSSEKP-----LNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQ 192 G N+ ++ + D + G +N + + + Sbjct: 134 VDGSNTGSNANGNTGIDILASLDRNSSGGIAASSIGVDTQNLSTTAGTDITTGTGTGSAD 193 Query: 193 MTDFIKQLEDKFSDDEYWAN-------------NWSNAS--------------------D 219 ++ + S A D Sbjct: 194 ISTLAANGGADLVTITGFTFLDTSGAAAASAALKGSTAGVDLNETNGLVVGDAVELQIGD 253 Query: 220 HNIKYRIKDTEGIDVSANVNMRGIR-------DIMFVAVIGTEFLSKNLTDGARNVLT-- 270 YR+ + + A ++ D F +NLT A ++ Sbjct: 254 IKGTYRVSEGDTNASVATGIKDAMQNAGLSTDDFAFDLTTAGTLTIENLTSEANIGVSYE 313 Query: 271 --------------------KKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNN 310 LS+++ L+G I+ A G E + + F+ + ++ Sbjct: 314 VSRGSGRLASLEDINVSTDPATALSSIEDMLTGAIDAAASFGSVEGRLETQASFISSLSD 373 Query: 311 IIDTYISKSIGVEQHTAHAQ 330 + + I + + A+ Sbjct: 374 SLKSGIGAMVDADMEETSAR 393 >gi|114054782|gb|ABI49992.1| FlaA [Clostridium botulinum] gi|114054784|gb|ABI49993.1| FlaA [Clostridium botulinum] Length = 279 Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 32/102 (31%), Gaps = 4/102 (3%) Query: 226 IKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKN----LTDGARNVLTKKMLSTVQQGL 281 + N + A+ + + + KM+ T+ + + Sbjct: 141 TGTGSELTFQIGANSGQTIQLAISAMDVAALGVASDKVTIGSAKKASEITKMIETIDKAI 200 Query: 282 SGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE 323 + + +RA LG ++ + L N + S+ V+ Sbjct: 201 NTVSGERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVD 242 >gi|15927015|ref|NP_374548.1| hypothetical protein SA1267 [Staphylococcus aureus subsp. aureus N315] gi|81781598|sp|Q99U54|EBHA_STAAN RecName: Full=Extracellular matrix-binding protein ebhA; AltName: Full=ECM-binding protein homolog A gi|13701232|dbj|BAB42527.1| ebhA [Staphylococcus aureus subsp. aureus N315] Length = 6713 Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 110/361 (30%), Gaps = 30/361 (8%) Query: 8 TSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLH 67 T+++ IL K ++ K E Q + L K ++ H Sbjct: 2425 TNAVTNAQGILDKANGQNMTKAQVEAALNQVTTAKNALNGDANVRQAKSDAKANLGTLTH 2484 Query: 68 SNSLVTKRLS------TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGML---- 117 N+ + L+ T+ ++S++ QD+ G + L + ++ + + Sbjct: 2485 LNNAQKQDLTSQIEGATTVNGVNSVKTKAQDLDGAMQRLESAIANKDQTKASENYIDADP 2544 Query: 118 --RDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF--DQMLQGFLEEN 173 + ++++ +T A + G N ++ + + + + D LQ E Sbjct: 2545 TKKTAFDNAITQAESYLNKDH---GTNKDKQAVEQAIQSVTSTENALNGDANLQCAKTEA 2601 Query: 174 SKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGID 233 ++++ L A + Q +D + A + +NA D +K I D + I Sbjct: 2602 TQAIDNLTQLNTPQKTALKQQVNAAQRVSGVTDLKNSATSLNNAMDQ-LKQAIGDHDTIV 2660 Query: 234 VS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAV 290 N + ++ + V + + Sbjct: 2661 AGGNYTNASPDKQGAYTDAYNAAKNIVNGSPNVITNAADVTAATQRVNNAETSLNG-DTN 2719 Query: 291 LGISEKNINEERVFL----QNKNNIIDTYISKSIGVEQ----HTAHAQLSTLINKIEMSY 342 L +++ + + + I I + V L +N++ S Sbjct: 2720 LATAKQQAKDALRQMTHLSDAQKQSITGQIDSATQVTGVQSVKDNATNLDNAMNQLRNSI 2779 Query: 343 M 343 Sbjct: 2780 A 2780 >gi|312795184|ref|YP_004028106.1| DNA repair protein recN [Burkholderia rhizoxinica HKI 454] gi|312166959|emb|CBW73962.1| DNA repair protein recN [Burkholderia rhizoxinica HKI 454] Length = 590 Score = 36.2 bits (82), Expect = 7.0, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 7/80 (8%) Query: 277 VQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQH--TAHAQLSTL 334 + + I +A LG ++E + + + + ++ A A L Sbjct: 256 LSHAANLIDGVQAALGA----LSESDDAMITQLGTLIAKLRDLAEIDSALGDALAALEPA 311 Query: 335 INKI-EMSYMITTKLQKLSI 353 ++ E +Y +T Q+L + Sbjct: 312 EIQLQEAAYSLTHYAQRLEL 331 >gi|221215579|ref|ZP_03588542.1| flagellar hook-associated protein 3 [Burkholderia multivorans CGD1] gi|221164567|gb|EED97050.1| flagellar hook-associated protein 3 [Burkholderia multivorans CGD1] Length = 411 Score = 36.2 bits (82), Expect = 7.0, Method: Composition-based stats. Identities = 40/366 (10%), Positives = 98/366 (26%), Gaps = 57/366 (15%) Query: 48 RVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 ++ +++ + ++ L L+S+ ++ + ++ +G + Sbjct: 45 GAAQAVQLSMTSATLSQYATNQNVALSSLQKEDQALTSVNNLLNSIHSIVIRAGDGALSD 104 Query: 108 NKFPINAGMLRDSYESFVTFANMTDE-GQYLFSGINSSEKPLNGYFT------------- 153 + A L+ + +T AN TD G YLF+G S+ P Sbjct: 105 SDRSALATQLQGYRDQLLTLANSTDGAGNYLFAGYQSTTAPFANGTGGGVVYSGDRGARQ 164 Query: 154 ---KDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYW 210 D+ D FL ++ + ++ + Sbjct: 165 VQIADTRTIAQGDDGASVFLSVPMLGSQPVPAAGAANQGTATIGAVTITDPSAATNTHTF 224 Query: 211 ANNWSNAS-----------------------------------DHNIKYRIKDTEGIDVS 235 + S + + V Sbjct: 225 TITFGGTSAAPTYTVTDETVAPPTTTAPQPYAAGTAIALGNGLSVPVSGTPSPNDTFSV- 283 Query: 236 ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLST----VQQGLSGIIEQRAVL 291 G + + +D ++T + ++ I+ +A + Sbjct: 284 TPAPQAGTDVFATLDTMIAALKVPIGSDTVAAAKLANAMTTGTTKLDNTMTNILTVQASV 343 Query: 292 GISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 G E+ I + Q + + ++ + +Q + N + + +LQ L Sbjct: 344 GGREQEIQAMQAVNQTNTLQVTSNLADLTSTNMVSTISQFLQMQNALTGAQKAYAQLQNL 403 Query: 352 SILNYL 357 S+ Y+ Sbjct: 404 SLFQYI 409 >gi|222833047|gb|EEE71524.1| predicted protein [Populus trichocarpa] Length = 217 Score = 36.2 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 42/106 (39%) Query: 252 IGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNI 311 + + GA + L+ + G+S + R+ G + ++N+ + Sbjct: 111 VIAGVKNGATDAGAMQQALGRGLNELDAGMSRVQAMRSFAGDQLNRADRLEDDMKNQADQ 170 Query: 312 IDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 + S++ ++ A + + ++ + +QKLS+ N++ Sbjct: 171 QEAARSRAEDIDMIKALSDVDMQKVGMQAALQSYASIQKLSLFNFI 216 >gi|146281778|ref|YP_001171931.1| flagellar hook-associated protein FlgL [Pseudomonas stutzeri A1501] gi|145569983|gb|ABP79089.1| flagellar hook-associated protein FlgL [Pseudomonas stutzeri A1501] Length = 526 Score = 36.2 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 1/129 (0%) Query: 20 KELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTS 79 ++ + VK +++ +G+ +L+ EQ++ + + + + T LS Sbjct: 17 QKGYANIVKTQQQISSGERIQTPADDPVGAARLLQLEQQQALLTQYQGNLTTATNSLSQE 76 Query: 80 QAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTD-EGQYLF 138 + L+S+ ++Q V G + A L N D GQYLF Sbjct: 77 EGILNSINNLLQKARELAVEAGSGALSDEDRSSIASELEQIENQLYALMNSKDANGQYLF 136 Query: 139 SGINSSEKP 147 +G +S +P Sbjct: 137 AGSSSGTQP 145 >gi|330906259|ref|XP_003295411.1| hypothetical protein PTT_00795 [Pyrenophora teres f. teres 0-1] gi|311333324|gb|EFQ96488.1| hypothetical protein PTT_00795 [Pyrenophora teres f. teres 0-1] Length = 1605 Score = 36.2 bits (82), Expect = 7.3, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 42/155 (27%), Gaps = 14/155 (9%) Query: 140 GINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQ 199 G N++ P T +FD +Q +++ LAG +L + F + Sbjct: 364 GSNNNNLPYYLPTTPHQDTNTNFDTAIQDTNFDDAIFDLAGGNLPAFGDDGNSANMFAQG 423 Query: 200 LEDKFSDDE------YWANNWS-NASDHNIKYRIKDTE-------GIDVSANVNMRGIRD 245 + ++D + W AS + E + Sbjct: 424 FQGAWNDIPVDPSLGSFTTAWEPQASSQPMPVNPSLEELVGAWVPQASSGDMAANPSLEQ 483 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQG 280 +M V + + + ++T Sbjct: 484 LMDSWVAQSSSSDVTIDPALLDGTVVSAVTTSSTA 518 >gi|209695935|ref|YP_002263865.1| flagellin [Aliivibrio salmonicida LFI1238] gi|208009888|emb|CAQ80201.1| flagellin subunit F [Aliivibrio salmonicida LFI1238] Length = 385 Score = 36.2 bits (82), Expect = 7.4, Method: Composition-based stats. Identities = 54/386 (13%), Positives = 117/386 (30%), Gaps = 47/386 (12%) Query: 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKN 60 MK G T SI NI + T +D +L + L+ + Sbjct: 1 MKRPGARTMSISVNTNISAMTAQRYMNNA-----TAAQADSMEKLSSG----LKINSAAD 51 Query: 61 HIAERLHSNSLVTKR-------------LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDN 107 + SN + + +S +Q +M++ +++ L L ++ Sbjct: 52 DASGLQISNRMTAQTRGLNVAVRNANDGMSIAQTAEGAMKETT-NVLQRLRDLSLQSSNG 110 Query: 108 NKFPINAGMLRDSYESFVTFAN-----MTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSF 162 + + +++ S N + G L +G K + Sbjct: 111 SNTDADREAMQEEASSLTDELNRIAETTSFAGTRLING-EFGTKSFQIGADSGEAVAMTL 169 Query: 163 DQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNI 222 + M KS A + +++ ++ + F Q DK +++ + D Sbjct: 170 NSMRADEATMGGKSYFAEEGRDINWTVGKENSQFNVQYNDKNGNEQKINIAAKSGDDIEE 229 Query: 223 KYRIKDTEGIDVSANVNMRGIRDIMFVAVIGT-----------EFLSKNLTDGARNVL-- 269 + + ++SA+V +G+ + + E +D + Sbjct: 230 LATYINGQTNELSASVTEKGVLQVFMSGETISSPLTFSGSLANELKMGGESDDTVASMNL 289 Query: 270 -----TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQ 324 ++ + + L + RA LG + L N N I S+ V+ Sbjct: 290 TTVGGAQRSIDVIDAALQYVDGNRASLGAFQNRFESAVNNLTNINENISDSNSQIKDVDF 349 Query: 325 HTAHAQLSTLINKIEMSYMITTKLQK 350 L+ + S I + ++ Sbjct: 350 AKETTNLTKNQILTQSSSSILAQAKQ 375 >gi|328722084|ref|XP_001948722.2| PREDICTED: hypothetical protein LOC100159668 [Acyrthosiphon pisum] Length = 1500 Score = 36.2 bits (82), Expect = 7.5, Method: Composition-based stats. Identities = 21/198 (10%), Positives = 50/198 (25%), Gaps = 28/198 (14%) Query: 46 GARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKT 105 G+ Q+ A + S + +TS A + + +T Sbjct: 504 GSSQGESFSTNQQATSAAANQQTTSAAANQQTTSAAANQQTTSASANQQTTSAAANQ-QT 562 Query: 106 DNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQM 165 + + ++ AN + ++ N T +++ Sbjct: 563 TSAAANQQTTSAAANQQTTSAAANQQTTSAA--ANQQTTSAAANQQTTSSGANQQTTSAG 620 Query: 166 LQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYR 225 N ++ AG + + + + Q T S+ Sbjct: 621 F------NQQTTGAGSNQQTTGAGSNQQTTGFG-------------------SNQQTTSE 655 Query: 226 IKDTEGIDVSANVNMRGI 243 + + +V +N G Sbjct: 656 GSNQQTTNVGSNQQTTGF 673 >gi|300311386|ref|YP_003775478.1| flagellin filament structural protein [Herbaspirillum seropedicae SmR1] gi|124483540|emb|CAM32643.1| Flagellin protein; filament structural protein [Herbaspirillum seropedicae] gi|167731129|emb|CAP19677.1| flagellar protein [Herbaspirillum seropedicae] gi|300074171|gb|ADJ63570.1| flagellin protein; filament structural protein [Herbaspirillum seropedicae SmR1] Length = 362 Score = 36.2 bits (82), Expect = 7.5, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 98/337 (29%), Gaps = 3/337 (0%) Query: 2 KTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNH 61 + I+T+ + + +G + A + + Sbjct: 1 MASVINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQVKG 60 Query: 62 IAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSY 121 +A + + T++ LS++ +Q M V G Sbjct: 61 LAVAQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLS 120 Query: 122 ESFVTFAN-MTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAG 180 + N + GQ LF+G G + + A + + + +N + Sbjct: 121 QEVFRVLNGTSFNGQNLFTGTGQGASAGTGSDSANVSASLTLSFQVGANVSDNKLNDQIT 180 Query: 181 QHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 L+ S N + + + A+ + K + + S + + Sbjct: 181 ITLDDLSNNGTMANVIGTSAKGLIGLGNTSGVSTAQATYTSAKAALDNLFATGSSLSSSA 240 Query: 241 RGIRDIMFVAVIGTE--FLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNI 298 + A + + L + + + +K + + + +S I +RA G + Sbjct: 241 LASSAVTLQATVDSAKLALDQAVAAPSAQSDAQKAIQNLDKAISLISSKRAEFGAVQNRF 300 Query: 299 NEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLI 335 + LQ + I + S+ + + A L+ Sbjct: 301 SAVISNLQVSSENITSSRSRIMDTDYAQETANLTRAQ 337 >gi|46578935|ref|YP_009743.1| flagellar hook-associated protein FlgL [Desulfovibrio vulgaris str. Hildenborough] gi|120603464|ref|YP_967864.1| flagellar hook-associated protein 3 [Desulfovibrio vulgaris DP4] gi|46448347|gb|AAS95002.1| flagellar hook-associated protein FlgL, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120563693|gb|ABM29437.1| flagellar hook-associated protein 3 [Desulfovibrio vulgaris DP4] gi|311232793|gb|ADP85647.1| flagellar hook-associated protein 3 [Desulfovibrio vulgaris RCH1] Length = 523 Score = 36.2 bits (82), Expect = 7.5, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 35/99 (35%) Query: 50 TSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNK 109 +L + + + + L+ + + L+SM ++ + G Sbjct: 47 ARVLNYRASLGDVEQYKKNVDTAKGWLNLADSTLTSMNTVLTRIKGLAEQAATSSVSPEN 106 Query: 110 FPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPL 148 + LR YE + AN E +++F+G E P Sbjct: 107 RKQISFELRQQYEQLINLANTKFENRHIFAGHKYDEAPF 145 Score = 36.2 bits (82), Expect = 8.1, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 33/88 (37%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 +K L + I+ A +G E ++ L N+ T +S V+ Sbjct: 436 VQKCLDELNGVSKTILTAAASIGGRENRLDVVSGVLDNQKLDQTTRMSAVEDVDFSELMT 495 Query: 330 QLSTLINKIEMSYMITTKLQKLSILNYL 357 +L+ ++ + ++++ N+L Sbjct: 496 RLAQEQLIYNSVLKSSSMIMQMNLSNFL 523 >gi|242392308|dbj|BAH80327.1| flagellin [Geobacillus stearothermophilus] Length = 271 Score = 36.2 bits (82), Expect = 7.6, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 37/113 (32%), Gaps = 1/113 (0%) Query: 212 NNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLT-DGARNVLT 270 + SN + N K + + N I ++ + T A N L Sbjct: 122 DRISNTTQFNTKNLLDGSLNATFQVGANSGQIINLTIATMNSTSLTVGAANISVANNSLA 181 Query: 271 KKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVE 323 ++ + ++ + ++R+ LG + + L + S+ V+ Sbjct: 182 SSSIANIDAAINAVSQERSKLGALQNRLEYTINNLSTSAENLTAAESRIRDVD 234 >gi|242003307|ref|XP_002422689.1| hypothetical protein Phum_PHUM006420 [Pediculus humanus corporis] gi|212505511|gb|EEB09951.1| hypothetical protein Phum_PHUM006420 [Pediculus humanus corporis] Length = 1679 Score = 36.2 bits (82), Expect = 7.6, Method: Composition-based stats. Identities = 33/276 (11%), Positives = 80/276 (28%), Gaps = 13/276 (4%) Query: 25 DSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHI-------AERLHSNSLVTKRLS 77 ++ L + TG+ + +L + E N + +N + + Sbjct: 1202 NASNLSTRLNTGRIVNCPKRL-SNALQHASQNSELNKLLLEKSDNRLLTDTNKKLNDKND 1260 Query: 78 -TSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQY 136 SQ +++ + ++ + + + S Sbjct: 1261 GVSQTFSDNIKLVSENGKLSQALSNNNNNNIDSGTNVNISAAGHSSSNSNLGLSMPGLSA 1320 Query: 137 LFSGINSSEKPLNGYFTKDSLA-KKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTD 195 L +G S++ P+ G T SL + + + + Q VS+++ Q + Sbjct: 1321 LLAGTPSADNPIPGASTSSSLLERLTSSTPNTTAAFSSPPLPVTPQSPNVSALSPNQNIN 1380 Query: 196 FIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTE 255 F K FS S S+ + S+ + + + Sbjct: 1381 FQKS---SFSTSPNSNAFNSTNSNSPLSNITSPASNFTSSSPKSQMQFQSSSPSSKEVMG 1437 Query: 256 FLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVL 291 S + ++ + QG++G+ + + Sbjct: 1438 ITSPLSSPPGTTPVSLNLQGLSLQGITGLQNVQVSI 1473 >gi|126734097|ref|ZP_01749844.1| flagellin-like protein [Roseobacter sp. CCS2] gi|126716963|gb|EBA13827.1| flagellin-like protein [Roseobacter sp. CCS2] Length = 512 Score = 36.2 bits (82), Expect = 7.7, Method: Composition-based stats. Identities = 26/209 (12%), Positives = 62/209 (29%), Gaps = 14/209 (6%) Query: 129 NMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSM 188 N + G F+ ++ G ++ ++ + V+ Sbjct: 281 NTSGNGAATFALQANNVTAAVGTTASQTIGSRASEIAFSATAGVADGDGYRATIGGVNF- 339 Query: 189 NAQQMTDFIKQLEDKFSDDE-YWANNWSNASDHNIKYRIKDTEGIDVSANV--NMRGIRD 245 D++ + F D A NI +K E N ++ Sbjct: 340 ------DYVAGPGEIFEDVARGLKTVIDGAGVENISTNVKQDETTGAWVLQIDNDGAVQS 393 Query: 246 IMFVAVIGTEFLSKNLTDGARNVLTKK----MLSTVQQGLSGIIEQRAVLGISEKNINEE 301 ++ G + +V T + L+ ++ ++ I+ A G S+ I + Sbjct: 394 LVEAGAAGGTATGGLVGLDKLDVTTDEGTEAALANIETYINTTIDAAADFGSSQGRIETQ 453 Query: 302 RVFLQNKNNIIDTYISKSIGVEQHTAHAQ 330 F+ + + + I + + A+ Sbjct: 454 SDFISKLTDSLKSGIGALVDADLEETSAR 482 >gi|256376480|ref|YP_003100140.1| flagellin domain protein [Actinosynnema mirum DSM 43827] gi|255920783|gb|ACU36294.1| flagellin domain protein [Actinosynnema mirum DSM 43827] Length = 386 Score = 36.2 bits (82), Expect = 7.8, Method: Composition-based stats. Identities = 27/377 (7%), Positives = 97/377 (25%), Gaps = 40/377 (10%) Query: 7 STSSIFERMNILT---KELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 S + L+ K++ KL + +++D L + I Sbjct: 7 SNIAAMNAYRNLSVNDKQMAGSLEKLSSGLRINRAADDAAGLSISQGLT-------SQIG 59 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + ++ Q ++ + + + + ++ ++ + + Sbjct: 60 GLKVAARNAQDGVNVVQTADGALNESAEILQRMRDLAVQASNGGSQDTNARAAAQTEFGQ 119 Query: 124 F------------------VTFANMTDEGQYLFSGINSSEKPLN---GYFTKDSLAKKSF 162 + A G + N+++ + S Sbjct: 120 LQKELDRIAKTTSFGGQKLLDTAGTAYNGTFQVGANNTADDQIQVNLDATVFGSSGGTKS 179 Query: 163 DQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDF---IKQLEDKFSDDEYWANNWSNASD 219 + G +++ + A + + + + D ++ ++ + D Sbjct: 180 SYTVSGGTYDSATLDTKTITATQGATTATVTLATPADLDAVVSQLNADATFSGGFTASKD 239 Query: 220 H---NIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGAR---NVLTKKM 273 I+ + T + ++ + G G + + + + Sbjct: 240 GGELKIESKTNGTGAVTLTGTSGLTGAGTNGTAGATGFDSAGLGVGTTVKVDTTANAQSA 299 Query: 274 LSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLST 333 + ++ + G+ RA LG + + + + S + + + Sbjct: 300 IDSIDSAIKGLSTARAQLGAYQNRFEHTINNINVQVENLSASKSNITDTDMAQEMVKFTR 359 Query: 334 LINKIEMSYMITTKLQK 350 + + + + Sbjct: 360 SQILSQAGTAMLAQANQ 376 >gi|229102338|ref|ZP_04233046.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock3-28] gi|229115180|ref|ZP_04244590.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock1-3] gi|228668320|gb|EEL23752.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock1-3] gi|228680985|gb|EEL35154.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock3-28] Length = 287 Score = 36.2 bits (82), Expect = 8.0, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 49/148 (33%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + ++ + Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + V L + + + V Sbjct: 63 QKDLADSKNVLTQTENTLQGIFKSLTRADQLTVQALNEPNGEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ ++P T Sbjct: 123 YLANTKEQGRYIFGGDSAEKQPFTEDGT 150 >gi|116250490|ref|YP_766328.1| flagellin A protein [Rhizobium leguminosarum bv. viciae 3841] gi|115255138|emb|CAK06212.1| flagellin, major subunit of flagellum [Rhizobium leguminosarum bv. viciae 3841] Length = 301 Score = 36.2 bits (82), Expect = 8.0, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + L+ V+ L + A LG I+ + F+ ++ ID+ + + + + Sbjct: 211 IQSALTNVEAALKAMTSAGAALGSLSSRIDAQDDFVSALSDSIDSGVGRLVDANMEEESS 270 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +LS L + +++ +Q LSI N Sbjct: 271 RLSALQTQQQLA------IQSLSIAN 290 >gi|13560136|emb|CAC36202.1| flagelline [Treponema denticola] Length = 234 Score = 36.2 bits (82), Expect = 8.2, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 39/120 (32%), Gaps = 8/120 (6%) Query: 236 ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVL-----TKKMLSTVQQGLSGIIEQRAV 290 NM + +N+ D + + + + T+ + + I +QRA Sbjct: 112 IGANMDQRTRAYIGTMTAKALGVRNIGDESIMTIETPEKANRAIGTLDEAIKKINKQRAD 171 Query: 291 LGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQK 350 LG + + V + + S+ V+ A + N+I T L + Sbjct: 172 LGAYQNRLELTVVGINIAAENLQASESRIRDVDM--AKEMVDYTKNQILTQ-SGTAMLAQ 228 >gi|218673669|ref|ZP_03523338.1| putative flagellin protein [Rhizobium etli GR56] Length = 311 Score = 36.2 bits (82), Expect = 8.3, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 111/352 (31%), Gaps = 54/352 (15%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T++ + +N + +G + A + + ++ Sbjct: 2 TSILTNNAAMAALQTLRGVNDSLKDTQGRVSSGYRVEKAADNAAYWSIATTMRSDNLALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ A + S +V ++ +V E D K L++ S Sbjct: 62 AVSDALGLGAAKVDTAYAAMDSALDVVSEIKAKIVAATEKGVDKTKIQQELDQLQEQLLS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A+ FSG N + S K + Sbjct: 122 IAQSAS--------FSGEN--------WVAGASGTKSVVSSFV----------------R 149 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + S+ + +MTD++ + S N+ + + T I+ S+ + Sbjct: 150 DGSNAVSVKMTDYVLD----------------SGSLGNVLFGMTSTGAIETSSGIIGTAF 193 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 VI + G L+ ++ L + + LG I + Sbjct: 194 NGTYGGTVIVMPSIYDLDIIGFTQGQLDAALTGIELVLGAMTAAGSALGSISTRIQLQEN 253 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ ++ ID+ I + + + ++LS L + ++ +Q LSI N Sbjct: 254 FVSGLHDSIDSGIGRLVDADMEEESSRLSALQTQQQLG------IQSLSIAN 299 >gi|184156136|ref|YP_001844476.1| hypothetical protein LAF_1660 [Lactobacillus fermentum IFO 3956] gi|183227480|dbj|BAG27996.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] Length = 913 Score = 36.2 bits (82), Expect = 8.3, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 61/190 (32%), Gaps = 9/190 (4%) Query: 17 ILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRL 76 +L+ K + T Q LG ++ + + + +L++ + + L Sbjct: 426 TTKAQLDTIVQKAQSNVTTIQ------GLGTALSQVNSLSTSLSGLQSQLNNLASLQTTL 479 Query: 77 STSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEG-- 134 S +Q L+ +++ + G L + L S + + G Sbjct: 480 SGAQTTLNQANQLLTTLQGYQGALSAMPSQLAALKQATNSLASGAASLQSGMSTAQAGIN 539 Query: 135 QYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMT 194 QY +G++++ + + +Q+ G + + A + N+ + Sbjct: 540 QYT-AGVDTAASGASQLSANSASLTSGANQLQSGVSQYTAGVNQANAGTGQLTANSAALV 598 Query: 195 DFIKQLEDKF 204 QL Sbjct: 599 SGANQLATAL 608 >gi|317406194|gb|EFV86443.1| flagellar hook-associated protein 3 [Achromobacter xylosoxidans C54] Length = 419 Score = 36.2 bits (82), Expect = 8.6, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 54/149 (36%), Gaps = 13/149 (8%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQS----SDYGLQ--LGARVTSILEWEQEK 59 +STS ++ D +L E++ +G+ +D L L V Sbjct: 3 LSTSMMYSNGLKGVLAQESDMNRLVEQVGSGKKFLTPADDPLSASLAINVAQTQSMNSTY 62 Query: 60 NHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRD 119 +N L L S+ + D+ +V G ++ + L++ Sbjct: 63 ALNRNTAKTN------LGQENNVLDSITTALADVRTRVVQAGNGTFADSDRQALSTALKN 116 Query: 120 SYESFVTFANMTD-EGQYLFSGINSSEKP 147 + ++ + AN TD GQYLFSG P Sbjct: 117 ARDALLGLANSTDGNGQYLFSGYQGGVVP 145 >gi|306820967|ref|ZP_07454587.1| flagellin [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551081|gb|EFM39052.1| flagellin [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 354 Score = 36.2 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 29/305 (9%) Query: 61 HIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDS 120 IA ++ +S Q +++ ++ + + ++ D NK + ++ Sbjct: 55 QIAGLQRASKNSLDGISMIQTAETALDEVHSMLQRMRELSVQAANDTNKLE-DRESIQKE 113 Query: 121 YESFVTFAN-----MTDEGQYLFSGINSSEKP---LNGYFTKDSLAKKSFDQMLQGFLEE 172 + N +F+ N +N + A + D Q Sbjct: 114 INQLTSEINRIGEATEFNKMKMFTADNEDGTAKSNMNIPVQLGANANQIMDVKFQTLSST 173 Query: 173 NSKSLLAGQHLEVSSMN----AQQMTDFIKQLEDKFSDDEYWANNWSNASD--HNIKYRI 226 + Q E +N I + +Y A D N+ + Sbjct: 174 SLGISGVNQGGEAFDINKVYVGHTHGTTIDEQTGAPVTPQYVKGAKYRAVDELQNMSIKE 233 Query: 227 KDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIE 286 + AN N ++ + + +S + Sbjct: 234 RVGNVPQKDANGNFEYKKEYALDVTTASS--------------ATAAIHVYDNAISRVSS 279 Query: 287 QRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITT 346 RA LG S+ + L + + +S+ + ++ + + + + Sbjct: 280 MRASLGASQNRLEHTIKTLDSSAENVTQTMSRIQDTDIAEQMSEFTKYNILQQSGTSMLS 339 Query: 347 KLQKL 351 + +L Sbjct: 340 QANQL 344 >gi|225181621|ref|ZP_03735062.1| flagellar hook-associated protein 3 [Dethiobacter alkaliphilus AHT 1] gi|225167729|gb|EEG76539.1| flagellar hook-associated protein 3 [Dethiobacter alkaliphilus AHT 1] Length = 296 Score = 36.2 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 34/93 (36%) Query: 265 ARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQ 324 A + ++ + Q + ++++RA G + + + T SK ++ Sbjct: 203 ADTADINQSIADLSQSIDWVLDKRAAHGALSNGLELTENNNGAQKLNLTTLRSKLEDIDF 262 Query: 325 HTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 ST+ S ++ S++++L Sbjct: 263 AETFMNYSTMDTLYRASLSAGARIMVPSLVDFL 295 >gi|116254453|ref|YP_770291.1| flagellin protein [Rhizobium leguminosarum bv. viciae 3841] gi|115259101|emb|CAK10212.1| Probable flagellin protein. Similar to FlaA, FlaB, FlaC and FlaE [Rhizobium leguminosarum bv. viciae 3841] Length = 311 Score = 36.2 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 112/352 (31%), Gaps = 54/352 (15%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 T I T++ + +N + +G + A + + ++ Sbjct: 2 TSILTNNAAMAALQTLRGVNDSLKDTQGRVSSGYRVEKAADNAAYWSIATTMRSDNMALS 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + L ++ T+ + + S +V D+ +V E D K L++ S Sbjct: 62 AVSDALGLGAAKVDTAYSAMDSALDVVSDIKAKIVAATEKGVDKTKIQQELDQLQEQLLS 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 A+ FSG N + S K + Sbjct: 122 IAQSAS--------FSGEN--------WVAGASGTKSVVSSFV----------------R 149 Query: 184 EVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGI 243 + S+ + +MTD++ + S N+ + + T I+ S+ + Sbjct: 150 DGSNAVSVKMTDYVLD----------------SGSLGNVLFGMTSTGAIETSSGIIGTAF 193 Query: 244 RDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERV 303 VI + G L+ V+ L + + LG I + Sbjct: 194 NGTYGSTVIVMASIYDLDITGFTQGQLDAALTGVELVLGAMTAAGSALGSISTRIQLQET 253 Query: 304 FLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 F+ ++ ID+ + + + + ++LS L + +++ +Q LSI N Sbjct: 254 FVSGLHDSIDSGVGRLVDADMEEESSKLSALQTQQQLA------IQSLSIAN 299 >gi|90418695|ref|ZP_01226606.1| possible flagellin protein [Aurantimonas manganoxydans SI85-9A1] gi|90336775|gb|EAS50480.1| possible flagellin protein [Aurantimonas manganoxydans SI85-9A1] Length = 579 Score = 36.2 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 37/103 (35%), Gaps = 6/103 (5%) Query: 253 GTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNII 312 T ++ A + L V ++ AVLG K + + F + + Sbjct: 472 LTAIGILDVDVAANPNAIEDYLQQVDTMQQRVVSGAAVLGAISKRLEMQTEFTRTVTQTL 531 Query: 313 DTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILN 355 + IS+ + + + L + +++ +Q LS+ N Sbjct: 532 EQGISRLVDADMEETSTRYRALEAQRQLA------VQSLSLAN 568 >gi|49477312|ref|YP_035859.1| flagellar hook-associated protein FlgL [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328868|gb|AAT59514.1| flagellar hook-associated protein 3 [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 287 Score = 36.2 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 51/148 (34%) Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65 +ST +LN ++ +G+ + + + + + +I + Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANIEQM 62 Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125 + L+ ++ L + K + ++ L + + + + V Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLMLQALSEQNGEKELKAIGAEIDQILKQVV 122 Query: 126 TFANMTDEGQYLFSGINSSEKPLNGYFT 153 AN ++G+Y+F G ++ + P T Sbjct: 123 YLANTKEQGRYIFGGDSAEKPPFTEDGT 150 >gi|209547937|ref|YP_002279854.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533693|gb|ACI53628.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 302 Score = 36.2 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Query: 270 TKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTAHA 329 + L+ V+ L + A LG K I + F+ ++ ID+ + + + + + Sbjct: 211 IQSALTNVEAALKSMTSAGAALGSISKRIELQENFVSALSDSIDSGVGRLVDADMEEESS 270 Query: 330 QLSTLINKIEMSYMITTKLQKLSILN 355 +LS L + +++ +Q LSI N Sbjct: 271 KLSALQTQQQLA------VQSLSIAN 290 >gi|551519|gb|AAD10271.1| polar flagellin [Vibrio parahaemolyticus] Length = 384 Score = 35.8 bits (81), Expect = 9.0, Method: Composition-based stats. Identities = 51/384 (13%), Positives = 112/384 (29%), Gaps = 52/384 (13%) Query: 10 SIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSN 69 ++ N+ + K E+ T R++S + K+ A SN Sbjct: 2 AVTVSTNVSAMTAQRYLNKATNELNTSM---------ERLSSGHKINSAKDDAAGLQISN 52 Query: 70 SLVTKR-------------LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGM 116 L + +S +Q +M + M + ++ N + Sbjct: 53 RLTAQSRGLDVAMRNANDGISIAQTAEGAMNEATSVMQRMRDLAIQSSNGTNSPAERQAI 112 Query: 117 LRDSYESFVTFAN-----MTDEGQYL----FS------GINSSEKPLNGYFTKDSLAKKS 161 +S + V N + G+ L F G +S E + G + + + Sbjct: 113 NEESM-ALVDELNRIAETTSFGGRRLLNGSFGEAAFQIGASSGEAMIMGLTSIRADDTRM 171 Query: 162 FDQMLQGFLE-------ENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNW 214 + + +K+ L + + D + K DD + Sbjct: 172 GGVTFFSEVGKGKDWGVDPTKADLKITLPGMGEDEDGNVDDLEININAKAGDDIEELATY 231 Query: 215 SNASDHNIKYRIKDTEGIDVSAN-VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKK- 272 N I + + + + N++G I + + +++ Sbjct: 232 INGQSDMINASVSEDGKLQIFVAHPNVQGDISISGGLASELGLSDQPVRTSVQDIDMTTV 291 Query: 273 -----MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 +S + L + QRA LG + ++ L N +D S+ + Sbjct: 292 QGSQNAISVLDSALKYVDSQRADLGAKQNRLSHSINNLANIQENVDASNSRIKDTDFAKE 351 Query: 328 HAQLSTLINKIEMSYMITTKLQKL 351 Q++ + I + ++L Sbjct: 352 TTQMTKAQILQQAGTSILAQAKQL 375 >gi|322504904|emb|CBZ14691.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 727 Score = 35.8 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 93/311 (29%), Gaps = 30/311 (9%) Query: 49 VTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNN 108 ++S + R+S+ Q +S ++ V L+ + Sbjct: 251 TCQAASHNTNPAVAGTFASASSTHSPRISSEQVKISPLRADVATASQSLLQSVSNNGAQL 310 Query: 109 KFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDS-LAKKSFDQMLQ 167 +A S V + +K+S AK Q Sbjct: 311 GLTTDAANNAAVIGSLVDAK--------------------TPWVSKNSEGAKSVPSSTPQ 350 Query: 168 GFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIK 227 G + A MN + +L + + SD + Sbjct: 351 GMSTSALPAAAAPFPHGCVGMNRNHVGAAGDRLVASPRNGSAMQQAARSGSDPHATKAAD 410 Query: 228 DTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQ 287 ++E D + +R +M ++ G + + D + + + +G +G E+ Sbjct: 411 ESETADEATTPKTAMLRSVMPWSLQGAAEWASS-DDAKKASVGGNSDYALSRGTTGKEEE 469 Query: 288 RAVLGISEKN-------INEERVFLQ-NKNNIIDTYISKSIGVEQHTAHAQLSTLINKIE 339 +S+ + LQ + D I + + + A ++++++ + Sbjct: 470 LGASHVSQLIAYRDMFVADPANQLLQSAPSKNADMSIVNMLLADPQQSDAAMTSVVSTGQ 529 Query: 340 MSYMITTKLQK 350 ++ TT+L K Sbjct: 530 LALPTTTELPK 540 >gi|323139668|ref|ZP_08074710.1| flagellin domain protein [Methylocystis sp. ATCC 49242] gi|322395100|gb|EFX97659.1| flagellin domain protein [Methylocystis sp. ATCC 49242] Length = 295 Score = 35.8 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 28/263 (10%), Positives = 79/263 (30%), Gaps = 10/263 (3%) Query: 72 VTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT 131 + L +Q+ L++ QK + + T + + + + Sbjct: 13 ALQSLRNTQSALNTTQKEISTGLKISSAAENAST--WAIAESMKSDKGVLSTISDSLSGA 70 Query: 132 DEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQ-GFLEENSKSLLAGQHLEVSSMNA 190 S +N + + + + K + Q Q G + + L ++SS+ + Sbjct: 71 K------SVLNVATAAVKSAISVMNDIKNAVAQAQQPGADQAKILTSLQQLGSQLSSVVS 124 Query: 191 QQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVA 250 + + + + +++N + N GI + Sbjct: 125 SATFTGLNVTDGSLTSPVSFIASYNNGGGTAASVVGTIDLTVTDLINTGGTGILEAAQAT 184 Query: 251 -VIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKN 309 + LS + ++ + A +G + ++++ F+ Sbjct: 185 GSTAATDFTGLTAADLAAATIADTLSNADKAIADLTTYAAEIGATVARVSQQNEFIDTMK 244 Query: 310 NIIDTYISKSIGVEQHTAHAQLS 332 + + T +S + + + A +L Sbjct: 245 DALTTGVSSLVDADMNEASTRLQ 267 >gi|28897562|ref|NP_797167.1| flagellin [Vibrio parahaemolyticus RIMD 2210633] gi|153840000|ref|ZP_01992667.1| polar flagellin C [Vibrio parahaemolyticus AQ3810] gi|260364619|ref|ZP_05777221.1| A-type flagellin [Vibrio parahaemolyticus K5030] gi|260878276|ref|ZP_05890631.1| A-type flagellin [Vibrio parahaemolyticus AN-5034] gi|260898106|ref|ZP_05906602.1| A-type flagellin [Vibrio parahaemolyticus Peru-466] gi|260901962|ref|ZP_05910357.1| A-type flagellin [Vibrio parahaemolyticus AQ4037] gi|29611967|sp|Q56712|FLAC_VIBPA RecName: Full=Polar flagellin C gi|28805774|dbj|BAC59051.1| polar flagellin FlaC [Vibrio parahaemolyticus RIMD 2210633] gi|149746460|gb|EDM57469.1| polar flagellin C [Vibrio parahaemolyticus AQ3810] gi|308086103|gb|EFO35798.1| A-type flagellin [Vibrio parahaemolyticus Peru-466] gi|308090162|gb|EFO39857.1| A-type flagellin [Vibrio parahaemolyticus AN-5034] gi|308106764|gb|EFO44304.1| A-type flagellin [Vibrio parahaemolyticus AQ4037] gi|308115106|gb|EFO52646.1| A-type flagellin [Vibrio parahaemolyticus K5030] gi|328473445|gb|EGF44293.1| flagellin [Vibrio parahaemolyticus 10329] Length = 384 Score = 35.8 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 51/384 (13%), Positives = 112/384 (29%), Gaps = 52/384 (13%) Query: 10 SIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSN 69 ++ N+ + K E+ T R++S + K+ A SN Sbjct: 2 AVTVSTNVSAMTAQRYLNKATNELNTSM---------ERLSSGHKINSAKDDAAGLQISN 52 Query: 70 SLVTKR-------------LSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGM 116 L + +S +Q +M + M + ++ N + Sbjct: 53 RLTAQSRGLDVAMRNANDGISIAQTAEGAMNEATSVMQRMRDLAIQSSNGTNSPAERQAI 112 Query: 117 LRDSYESFVTFAN-----MTDEGQYL----FS------GINSSEKPLNGYFTKDSLAKKS 161 +S + V N + G+ L F G +S E + G + + + Sbjct: 113 NEESM-ALVDELNRIAETTSFGGRRLLNGSFGEAAFQIGASSGEAMIMGLTSIRADDTRM 171 Query: 162 FDQMLQGFLE-------ENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNW 214 + + +K+ L + + D + K DD + Sbjct: 172 GGVTFFSEVGKGKDWGVDPTKADLKITLPGMGEDEDGNVDDLEININAKAGDDIEELATY 231 Query: 215 SNASDHNIKYRIKDTEGIDVSAN-VNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKK- 272 N I + + + + N++G I + + +++ Sbjct: 232 INGQSDMINASVSEDGKLQIFVAHPNVQGDISISGGLASELGLSDEPVRTSVQDIDMTTV 291 Query: 273 -----MLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHTA 327 +S + L + QRA LG + ++ L N +D S+ + Sbjct: 292 QGSQNAISVLDSALKYVDSQRADLGAKQNRLSHSINNLANIQENVDASNSRIKDTDFAKE 351 Query: 328 HAQLSTLINKIEMSYMITTKLQKL 351 Q++ + I + ++L Sbjct: 352 TTQMTKAQILQQAGTSILAQAKQL 375 >gi|221056438|ref|XP_002259357.1| protein phosphatase [Plasmodium knowlesi strain H] gi|193809428|emb|CAQ40130.1| protein phosphatase, putative [Plasmodium knowlesi strain H] Length = 977 Score = 35.8 bits (81), Expect = 9.2, Method: Composition-based stats. Identities = 13/164 (7%), Positives = 43/164 (26%), Gaps = 2/164 (1%) Query: 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSG 140 + S+ + ++ +++ + + + + + + S Sbjct: 455 SAESAKAPVAENAESTATEATPSTSESMATEASPSTSTPAATEATPSTSASTATEAIPST 514 Query: 141 INSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQL 200 S+ + + + + E + + S +A T+ Sbjct: 515 SASTATEATPSTSASTATEATPSTSASTATEATPSTSASTATEATPSTSASTATEATPST 574 Query: 201 EDKFSDDEYWANNWSNASD-HNIKYRIKDTE-GIDVSANVNMRG 242 + + + + S A++ TE S + N Sbjct: 575 SASTATEATPSTSASTATEATPSTSASTATEATPSTSTSANEGA 618 >gi|313835332|gb|EFS73046.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL037PA2] gi|314969983|gb|EFT14081.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Propionibacterium acnes HL037PA3] Length = 869 Score = 35.8 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 43/120 (35%), Gaps = 4/120 (3%) Query: 164 QMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIK 223 G LE + S+L G+ S ++ + + D NW SD ++ Sbjct: 510 AAESGLLESVAGSVLHGEDAVESLLSKATEAFGLSG--ARLMSDGRVVANWGTTSDQVME 567 Query: 224 YRIKDTEGIDVSANVNMRGIRDIMF--VAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGL 281 +RI D ++ R +M A +GT + L + A+ V V+ L Sbjct: 568 HRIDDHTVLEFHGPEPDASERRLMLVIAAQVGTAMEQRQLEETAKAVEPLAATDRVRTAL 627 >gi|117923389|ref|YP_864006.1| flagellin domain-containing protein [Magnetococcus sp. MC-1] gi|117607145|gb|ABK42600.1| flagellin domain protein [Magnetococcus sp. MC-1] Length = 377 Score = 35.8 bits (81), Expect = 9.5, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 64/199 (32%), Gaps = 7/199 (3%) Query: 152 FTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWA 211 +++ S Q+ +G L E +L + L V +++ L D+ S Sbjct: 170 SARNANDGISLVQVAEGALVETEAALQRMRELAVQAVSGTYTDSDRSDLNDEVSALISEI 229 Query: 212 NNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTK 271 S + N + T D+ G + + A G L N T L Sbjct: 230 TRISTQTTFNGAVLMSSTMTFDIQVGA-DVGQKITVSTAAAGASALGVNTTSITSVGLAS 288 Query: 272 KMLSTVQQGLSGIIEQRAVLGISEKNINEE---RVFLQNKNNIIDTYISKSIGVEQHTAH 328 ++ + ++ + + RAVLG+ + + L + I V+ Sbjct: 289 VAITKIDAAIARVSDMRAVLGVQQNRLEAAVHNLSSLCAHTEVARGRIMD---VDMAQET 345 Query: 329 AQLSTLINKIEMSYMITTK 347 A L+ + + + Sbjct: 346 ANLTKQSILQQTGAAMLAQ 364 >gi|291537706|emb|CBL10818.1| Flagellin and related hook-associated proteins [Roseburia intestinalis M50/1] Length = 541 Score = 35.8 bits (81), Expect = 9.6, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 52/179 (29%), Gaps = 14/179 (7%) Query: 150 GYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE-VSSMNAQQMTDFIK-QLEDKFSDD 207 A FD L G + +L A VS + T D Sbjct: 341 DLEDILKTAGFDFDVKLSGNTPDEPNTLFATSGASSVSDITMGNATAGAGLGSTDAMWGQ 400 Query: 208 EYWANNWSNASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARN 267 + + S A I +I EG +S +++ M +G + +L+ Sbjct: 401 AGYDSVSSGAG---ITLQIGANEGQTMSFSIDD------MSARALGVDGNKVDLST---Q 448 Query: 268 VLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSIGVEQHT 326 +K T+ + + QR +G + + L T S+ + Sbjct: 449 SGAQKATDTIDAAIKKVSAQRGKMGAIQNRLEHTISNLDTAAENTQTAESRIRDTDMAE 507 >gi|291537844|emb|CBL10955.1| Flagellin and related hook-associated proteins [Roseburia intestinalis XB6B4] Length = 541 Score = 35.8 bits (81), Expect = 9.7, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 61/204 (29%), Gaps = 14/204 (6%) Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN G+Y E A FD L G + +L A Sbjct: 316 IDGANAVTAGEYTIHLAAGKEYTAEDLEDVLKTAGFDFDVKLSGNTPDEPNTLFATSG-- 373 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNW--SNASDHNIKYRIKDTEGIDVSANVNMRG 242 S++ M S D W S +S I +I EG +S +++ Sbjct: 374 ASTVTDITMGA-GTTGAGLGSTDAMWGQAGYDSVSSGAGITLQIGANEGQTMSFSIDD-- 430 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 M +G + +L+ A +K T+ + + QR +G + + Sbjct: 431 ----MSARALGVDGNKVDLSTQAG---AQKATDTIDAAIKKVSAQRGRMGAIQNRLEHTI 483 Query: 303 VFLQNKNNIIDTYISKSIGVEQHT 326 L T S+ + Sbjct: 484 SNLDTAAENTQTAESRIRDTDMAE 507 >gi|240146660|ref|ZP_04745261.1| flagellin [Roseburia intestinalis L1-82] gi|257201204|gb|EEU99488.1| flagellin [Roseburia intestinalis L1-82] Length = 541 Score = 35.8 bits (81), Expect = 9.7, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 61/204 (29%), Gaps = 14/204 (6%) Query: 125 VTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184 + AN G+Y E A FD L G + +L A Sbjct: 316 IDGANAVTAGEYTIHLAAGKEYTAEDLEDVLKTAGFDFDVKLSGNTPDEPNTLFATSG-- 373 Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNW--SNASDHNIKYRIKDTEGIDVSANVNMRG 242 S++ M S D W S +S I +I EG +S +++ Sbjct: 374 ASTVTDITMGA-GTAGAGLGSTDAMWGQAGYDSVSSGAGITLQIGANEGQTMSFSIDD-- 430 Query: 243 IRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEER 302 M +G + +L+ A +K T+ + + QR +G + + Sbjct: 431 ----MSARALGVDGNKVDLSTQAG---AQKATDTIDAAIKKVSAQRGRMGAIQNRLEHTI 483 Query: 303 VFLQNKNNIIDTYISKSIGVEQHT 326 L T S+ + Sbjct: 484 SNLDTAAENTQTAESRIRDTDMAE 507 >gi|126728916|ref|ZP_01744731.1| flagellin protein [Sagittula stellata E-37] gi|126710846|gb|EBA09897.1| flagellin protein [Sagittula stellata E-37] Length = 431 Score = 35.8 bits (81), Expect = 9.9, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 8/188 (4%) Query: 4 TGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIA 63 + I T++ K +N+ + ++ TG+ + A E + Sbjct: 2 SSILTNNGAIAALQTLKGINRQMGDVQTQISTGKKVNSARDNAAVWAISKAMESDVAGFK 61 Query: 64 ERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYES 123 + S SL +S ++ ++ ++ + +V E D +K + LRD + Sbjct: 62 KVSDSLSLGLATISVARQGAETVTDLLTQVKEKVVAAQEENVDRDKIQADISALRDQVAA 121 Query: 124 FVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHL 183 V A GQY+ N+ + + S D+ G + + Sbjct: 122 VVGAA--QFNGQYML--TNTDQTA----DSGGINVLASIDRSFDGVTSSDIRVNKQDLGT 173 Query: 184 EVSSMNAQ 191 SS+ A Sbjct: 174 GASSIGAS 181 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.305 0.132 0.330 Lambda K H 0.267 0.0406 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,282,430,044 Number of Sequences: 14124377 Number of extensions: 178643367 Number of successful extensions: 535305 Number of sequences better than 10.0: 5315 Number of HSP's better than 10.0 without gapping: 1809 Number of HSP's successfully gapped in prelim test: 3774 Number of HSP's that attempted gapping in prelim test: 527522 Number of HSP's gapped (non-prelim): 9249 length of query: 357 length of database: 4,842,793,630 effective HSP length: 140 effective length of query: 217 effective length of database: 2,865,380,850 effective search space: 621787644450 effective search space used: 621787644450 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.4 bits) S2: 82 (36.2 bits)