RPSBLAST alignment for GI: 254780523 and conserved domain: pfam00669
>gnl|CDD|144315 pfam00669, Flagellin_N, Bacterial flagellin N-terminal helical region. Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700. Length = 139
Score = 43.1 bits (102), Expect = 1e-04
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 9/143 (6%)
Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65
IST+++ + K EE+ TG D L LGA + + +++
Sbjct: 1 ISTNALALAARRTLNRNQAELQKAQEELSTGLRIDSALDLGAGTAISVSLRSQIRGLSQA 60
Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125
+ +N+L RL T+Q LS + I+Q + L + I+ + +
Sbjct: 61 VRNNNLGISRLQTAQGALSEVTDILQRLRE----LAVQAANGGNSDIDRASAQAEIQQLT 116
Query: 126 TFANMTDE-----GQYLFSGINS 143
+ N G+YLFSG N+
Sbjct: 117 SELNNIANTTSFNGEYLFSGTNT 139