RPSBLAST alignment for GI: 254780523 and conserved domain: COG1344
>gnl|CDD|31535 COG1344, FlgL, Flagellin and related hook-associated proteins [Cell motility and secretion]. Length = 360
Score = 57.0 bits (137), Expect = 7e-09
Identities = 61/360 (16%), Positives = 118/360 (32%), Gaps = 13/360 (3%)
Query: 6 ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65
I+T+ + + K E + +G + A + L + +++
Sbjct: 3 INTNMAALNALRNLNKNQSELAKSQERLSSGLRINSASDDAAGLAIALRLRSQIRGLSQA 62
Query: 66 LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125
+ +L T++ LS + KI+Q + V G + + +
Sbjct: 63 KDNAQDGISKLQTAEGALSEISKILQRIKELAVQAANGTLSDADRAAIQKEIEQLLDELD 122
Query: 126 TFANMTD-EGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLE 184
AN T G+YLF+G + +KP + K SF+ G L +
Sbjct: 123 NIANTTSFNGEYLFAGSKT-DKPFDFQNAGGETIKGSFNSDSSGT----VSVGLDITNTG 177
Query: 185 VSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNI----KYRIKDTEGIDVSANVNM 240
S + T + ++ + A+ + K T + ANV
Sbjct: 178 DLSFTSLGTTAKDEPIDAGDVTAGPTNLFGAGANAADGASLGKALDAATTNTQIGANVGQ 237
Query: 241 R---GIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKN 297
I D + L+ + A + L T+ L I RA LG +
Sbjct: 238 TTTLNINDGNVMTASAAGALADPGSSVATADGAQAALGTIDSALDNITSARAELGAVQNR 297
Query: 298 INEERVFLQNKNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357
+ L N+++ + S+ + V+ +L+ L + S + +LS+L
Sbjct: 298 LESAINNLSNQSDNLTAAESRIVDVDMAEESTELTKLQILQQASLQALAQANQLSLLVLS 357