HHsearch alignment for GI: 254780524 and conserved domain: COG1558
>COG1558 FlgC Flagellar basal body rod protein [Cell motility and secretion].
Probab=98.92 E-value=2.5e-09 Score=74.37 Aligned_cols=46 Identities=24% Similarity=0.304 Sum_probs=42.7
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 8876628888999999999999999999999999999999987409
Q gi|254780524|r 435 SYSNTVGVNLQEELSFLIKVEQSYNISNKLIMFTDKMLQTLLEGVK 480 (480)
Q Consensus 435 ~~lE~SNVDL~eE~tnLI~~QraYqANakvItT~Demlq~Lin~~R 480 (480)
T Consensus 92 GYV~~PNVn~v~EM~dmisAsRsYeANv~v~~~~K~m~~~tL~i~~ 137 (137)
T COG1558 92 GYVKMPNVNVVIEMVDMISASRSYEANVEVLNTAKSMMQKTLELGQ 137 (137)
T ss_pred CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 7556587658999999999999899999999999999999997519