HHsearch alignment for GI: 254780524 and conserved domain: COG4786
>COG4786 FlgG Flagellar basal body rod protein [Cell motility and secretion].
Probab=100.00 E-value=4.8e-35 Score=233.08 Aligned_cols=70 Identities=21% Similarity=0.332 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 87664211123223456799999998876628888999999999999999999999999999999987409
Q gi|254780524|r 410 WLEKNRSDSHDLHMKSQVVFNHISESYSNTVGVNLQEELSFLIKVEQSYNISNKLIMFTDKMLQTLLEGVK 480 (480)
Q Consensus 410 ~~~t~~sg~~~~~~~~~~~~g~i~~~~lE~SNVDL~eE~tnLI~~QraYqANakvItT~Demlq~Lin~~R 480 (480)
T Consensus 196 ~~~t~~sg-~~~~~~~~~~~g~i~QG~lE~SNVn~v~EMt~mI~aqRayE~nsK~i~~~D~m~~~~~n~~~ 265 (265)
T COG4786 196 YQETAASG-PIVGVPGDNGFGAIRQGFLEASNVNVVEEMTDMIEAQRAYEANSKVIQTADEMLGKANNLLR 265 (265)
T ss_pred CCCCCCCC-CCCCCCCCCCCCEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 10168877-75467787875527864121205679999999999999999887886658999999986549