HHsearch alignment for GI: 254780524 and conserved domain: PRK06802
>PRK06802 flgC flagellar basal body rod protein FlgC; Reviewed.
Probab=98.84 E-value=4.1e-09 Score=73.10 Aligned_cols=46 Identities=17% Similarity=0.327 Sum_probs=43.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC------CEEEEEEEEEC
Q ss_conf 91358899999999999998678744202578998------12679998604
Q gi|254780524|r 1 MSLLAVFNKAQNICNNASQQFASIVRNIENADNKN------YVRRDTMTTIS 46 (480)
Q Consensus 1 Msl~~sl~~~~SGL~a~q~~ldvisnNIANvnT~G------yk~~~~~f~~~ 46 (480)
T Consensus 1 Ms~~~~~~Ia~Sgl~Aqr~Rm~~ia~NiANa~tt~~~~g~~y~~k~~vf~~~ 52 (141)
T PRK06802 1 MSFNQIYRIAGSAMTAQTIRLNTVASNLANAESPAASAATVYKARSPVFSAV 52 (141)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 9607788899999999999999999988726888989998663433324565