HHsearch alignment for GI: 254780524 and conserved domain: PRK07191
>PRK07191 flgK flagellar hook-associated protein FlgK; Validated.
Probab=100.00 E-value=0 Score=418.29 Aligned_cols=445 Identities=16% Similarity=0.190 Sum_probs=356.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEC----------CCCEEEEEEEEEHHHHHHHHHHHH
Q ss_conf 9135889999999999999867874420257899812679998604----------660699899872068878887754
Q gi|254780524|r 1 MSLLAVFNKAQNICNNASQQFASIVRNIENADNKNYVRRDTMTTIS----------PENVTVVTQRSENKNMFDKVLHAH 70 (480)
Q Consensus 1 Msl~~sl~~~~SGL~a~q~~ldvisnNIANvnT~Gyk~~~~~f~~~----------~~g~~~~~~~~~~~~~~~~~~~~~ 70 (480)
T Consensus 1 m~~---ln~a~SgL~a~q~al~vts~NIANanT~GYsRq~v~~~~~~~~~~~~~~~G~GV~v~~I~R~~D~~l~~~~~~~ 77 (456)
T PRK07191 1 MNF---IRTAFSGMQAAQAHLNATSMNIANMHTPGYSRQGVEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWQA 77 (456)
T ss_pred CCH---HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHH
T ss_conf 975---78999999999999999988574389989150366764235777788755677798378870518999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 44556788787899888651267777764011366777668764138675300112210122222210002245656654
Q gi|254780524|r 71 SSAIGQQRLLQSFEALKEMMSADDHYNNSPTHYISKLRDSLESYSKNLSEDILGKTVIDNAEEVVQNFNTSAREVQKIRA 150 (480)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (480)
T Consensus 78 ~s~~~~~~~~~~~l~~le~~~~~--~~~~l~~~l~~f~~a~~~la~~P~~~~~r~~v~~~a~~l~~~~n~~~~~l~~~~~ 155 (456)
T PRK07191 78 NSQQGYYDAGEQYFNALELVVGN--KSTSLATGLNNFFSALSAATQLPDSPPMRQQVIESANAMALRFNNVNNFIVQQKK 155 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88989999999999999986078--9985799999999999999849898899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 32000111278788754343210112223456676521001210000101002012478733771147870697061034
Q gi|254780524|r 151 DADKEIELEISNLRRFLSELTVVNDAIKFKTASKHDAHDFLDQRDVLLQKISEIIGISTIVRNNNDMVVYTSDGTTLFET 230 (480)
Q Consensus 151 ~~~~~~~~~v~~~n~~~~~~~~~n~~~~~~~~~~~~~~~~~d~~~~~~~~~s~~~~~~~~~~~~~~~~v~~~~g~~l~~~ 230 (480)
T Consensus 156 ~~~~~i~~~V~~iN~ll~qIa~LN~~I~~~~~~g~~~ndL~DqRD~ll~eLS~~i~i~v~~~~~G~v~v~~~~G~~LV~g 235 (456)
T PRK07191 156 SIGQQRDATVKQINSLTRSIADYNQKILKNRSDGNNISDLLDQRDLQIKKLSGLIEVRVVQQEDGTYRVSVKNGQPLVNG 235 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCEEEEC
T ss_conf 99999999999999999999999999997306899816789999999999875228289987999889995798276507
Q ss_pred CCC-EEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 441-2576304566676643216733655665677666765311101110233136778788765543100123455777
Q gi|254780524|r 231 VPR-DINFEKMNSYTVTSESNPIFIDGVVVSSNQGSAVPKGKIKALLQIRDSVVPIFQNQLDEMARVLIGSFSEKDPIAG 309 (480)
Q Consensus 231 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (480)
T Consensus 236 ~~~~~l~~~~~~~--g~~-~~~~~~~~~~~---~~~~~~gG~l~gl~~~r~~~l~~~~~~Ld~lA~~la~~~N~~~~~g~ 309 (456)
T PRK07191 236 AVAAELAVDTSSV--GTQ-KLTLHFSGATQ---GMNMSCGGQLGGLNDYELTTLKPLQDSTQEMAKTVADKFNDQLTKGF 309 (456)
T ss_pred CEEEEEEEEECCC--CCC-EEEEEECCCCC---CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 7035788750589--861-37998568545---57788875257788878743899999999999999999999873266
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 77765432112234566665433222222333334666210002456666555566654431024567664201111233
Q gi|254780524|r 310 NSENVPGLFIADGIKDLDNKLCQGISETICVNPQYRSNPSFLRDGGSVSKKFLWNVKNLAGYPDLINHYCDSFNKNFIFD 389 (480)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (480)
T Consensus 310 ~~~g~~G~~~f~~~~~~~~~~~~-------~~---~~~~~~~~~~---------~~~~~~gd~~~~~~l~~l~~~~~~-- 368 (456)
T PRK07191 310 DMNGAPGKPLFTFNPSDPNGMLQ-------LS---AIKPEELALS---------GDPKPPGDNSNLFELLEIRSTPVD-- 368 (456)
T ss_pred CCCCCCCCCCEECCCCCCCCCEE-------EC---CCCHHHHCCC---------CCCCCCCCHHHHHHHHHHHCCCCC--
T ss_conf 78899886550248887553100-------02---2477650114---------788899988999999970146656--
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 33456776528999987778876642111232234567999999988766288889999999999999999999999999
Q gi|254780524|r 390 PVAGINTNVTLLEYARNSIGWLEKNRSDSHDLHMKSQVVFNHISESYSNTVGVNLQEELSFLIKVEQSYNISNKLIMFTD 469 (480)
Q Consensus 390 ~~~~~~~~~~l~~~~~~~~~~~~t~~sg~~~~~~~~~~~~g~i~~~~lE~SNVDL~eE~tnLI~~QraYqANakvItT~D 469 (480)
T Consensus 369 -~~-g~~~~t~~~~~~~lvs~ig~~~~~a~~~~~~~~~~~~~~~~~r~svsGVnlDEE~~nLi~~Q~aY~AsArvitt~d 446 (456)
T PRK07191 369 -LP-GMGNVSLGDAATALVGYIAITSNQNHSELENAENVRNQAERYWESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGD 446 (456)
T ss_pred -CC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -67-8787779999999999999999999999999999999999999846581789999999999999999999999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999998740
Q gi|254780524|r 470 KMLQTLLEGV 479 (480)
Q Consensus 470 emlq~Lin~~ 479 (480)
T Consensus 447 emldtLln~V 456 (456)
T PRK07191 447 KLFSDLLALV 456 (456)
T ss_pred HHHHHHHHHC
T ss_conf 9999999539