HHsearch alignment for GI: 254780524 and conserved domain: PRK12624
>PRK12624 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=98.39 E-value=2.3e-07 Score=62.28 Aligned_cols=40 Identities=25% Similarity=0.237 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE
Q ss_conf 8999999999999986787442025789981267999860
Q gi|254780524|r 6 VFNKAQNICNNASQQFASIVRNIENADNKNYVRRDTMTTI 45 (480)
Q Consensus 6 sl~~~~SGL~a~q~~ldvisnNIANvnT~Gyk~~~~~f~~ 45 (480)
T Consensus 10 T~~lL~kaLd~~~~Rq~vIa~NIAN~dTPgYK~~dv~Fe~ 49 (143)
T PRK12624 10 TQDLLERGMNNSIQKRKVISDNIANADVPHFKRSEVIFES 49 (143)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
T ss_conf 9999999999999999999860112689997632062999