HHsearch alignment for GI: 254780524 and conserved domain: PRK12626
>PRK12626 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=98.16 E-value=8.7e-07 Score=58.74 Aligned_cols=43 Identities=26% Similarity=0.224 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE
Q ss_conf 3588999999999999986787442025789981267999860
Q gi|254780524|r 3 LLAVFNKAQNICNNASQQFASIVRNIENADNKNYVRRDTMTTI 45 (480)
Q Consensus 3 l~~sl~~~~SGL~a~q~~ldvisnNIANvnT~Gyk~~~~~f~~ 45 (480)
T Consensus 5 ld~~~~~~~~AL~lR~~RqevlAsNIANadTPgYKArDldFe~ 47 (162)
T PRK12626 5 LDAEFAFGRQALDVRAYRQELLSSNIANADTPGYRARDVDFAS 47 (162)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
T ss_conf 7877361099999999999999850013789998643587999