HHsearch alignment for GI: 254780524 and conserved domain: PRK12627
>PRK12627 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=97.68 E-value=3.5e-05 Score=48.88 Aligned_cols=39 Identities=31% Similarity=0.454 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE-EEE
Q ss_conf 899999999999998678744202578998126799-986
Q gi|254780524|r 6 VFNKAQNICNNASQQFASIVRNIENADNKNYVRRDT-MTT 44 (480)
Q Consensus 6 sl~~~~SGL~a~q~~ldvisnNIANvnT~Gyk~~~~-~f~ 44 (480)
T Consensus 7 lf~l~~~~~~~la~Rq~ViA~NIANADTPgYkarDl~~F~ 46 (128)
T PRK12627 7 IFRMASAMARHAGERQAVIAQNVANADTPGYRARDLADFA 46 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHH
T ss_conf 9999999999999999999974103799998500004199