HHsearch alignment for GI: 254780524 and conserved domain: PRK12818
>PRK12818 flgG flagellar basal body rod protein FlgG; Reviewed.
Probab=99.95 E-value=1.8e-29 Score=198.72 Aligned_cols=114 Identities=9% Similarity=0.012 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE---CC-----------------CCEE-EEEEEEEHHH
Q ss_conf 3588999999999999986787442025789981267999860---46-----------------6069-9899872068
Q gi|254780524|r 3 LLAVFNKAQNICNNASQQFASIVRNIENADNKNYVRRDTMTTI---SP-----------------ENVT-VVTQRSENKN 61 (480)
Q Consensus 3 l~~sl~~~~SGL~a~q~~ldvisnNIANvnT~Gyk~~~~~f~~---~~-----------------~g~~-~~~~~~~~~~ 61 (480)
T Consensus 1 M~~~ly~a~sgm~a~~~~ldviaNNlAN~nT~GfK~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 80 (255)
T PRK12818 1 MIRGLYTAVSGMITLEAKQDVITNNLANVNTVGYKSDNLAFKSFEDVLIENYDKKVGNKNIKNIIGGLSMGSKIDEVNTL 80 (255)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
T ss_conf 96689999999999998778998999877756448585006568999864104446786666644541452264356764
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH
Q ss_conf 87888775444556788787899888651267777764011366777668764138675300
Q gi|254780524|r 62 MFDKVLHAHSSAIGQQRLLQSFEALKEMMSADDHYNNSPTHYISKLRDSLESYSKNLSEDIL 123 (480)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (480)
T Consensus 81 ~~qG~l~~Tg~~lDlAI~G~GfF~V~-------~~g~~~yTR~G~f~vd~~G~Lvt~~G~~v 135 (255)
T PRK12818 81 FTQGIIKSTDKPTDFAIQGRGFFTVE-------RNGRNYYTRDGHFHVDTQGYLVNDSGYYV 135 (255)
T ss_pred CCCCCEEECCCCCEEEECCCCEEEEE-------CCCCEEEEECCCEEECCCCCEECCCCCEE
T ss_conf 27878454598104998698589995-------59965899756577989976892899892