HHsearch alignment for GI: 254780524 and conserved domain: TIGR01395
>TIGR01395 FlgC flagellar basal-body rod protein FlgC; InterPro: IPR006299 These sequences represent FlgC, one of several components of bacterial flagella. FlgC is part of the basal body. ; GO: 0019861 flagellum.
Probab=99.00 E-value=2.4e-10 Score=80.67 Aligned_cols=46 Identities=26% Similarity=0.330 Sum_probs=43.5
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 8876628888999999999999999999999999999999987409
Q gi|254780524|r 435 SYSNTVGVNLQEELSFLIKVEQSYNISNKLIMFTDKMLQTLLEGVK 480 (480)
Q Consensus 435 ~~lE~SNVDL~eE~tnLI~~QraYqANakvItT~Demlq~Lin~~R 480 (480)
T Consensus 102 GYV~~PNVn~~~EMVdmi~A~RsYeANv~v~~~~K~m~~~tL~~~~ 147 (147)
T TIGR01395 102 GYVKMPNVNVVEEMVDMIEASRSYEANVQVFNTAKSMLLRTLEIGR 147 (147)
T ss_pred CCEECCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8470585585432321120024788999999999999999999709