HHsearch alignment for GI: 254780524 and conserved domain: pfam00460

>pfam00460 Flg_bb_rod Flagella basal body rod protein.
Probab=98.71  E-value=6.4e-09  Score=71.89  Aligned_cols=31  Identities=26%  Similarity=0.324  Sum_probs=29.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf             9999999999999867874420257899812
Q gi|254780524|r    7 FNKAQNICNNASQQFASIVRNIENADNKNYV   37 (480)
Q Consensus         7 l~~~~SGL~a~q~~ldvisnNIANvnT~Gyk   37 (480)
T Consensus         1 l~~a~sal~a~~~~l~vianNiAN~nT~G~k   31 (31)
T pfam00460         1 LYTAVSALNAQQIALDVIANNIANANTTGYK   31 (31)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             9138876508999999998610245576789