BLAST/PSIBLAST alignment of GI: 254780524 and GI: 116250501 at iteration 1
>gi|116250501|ref|YP_766339.1| flagellar hook-associated protein FlgK [Rhizobium leguminosarum bv. viciae 3841] Length = 495
>gi|115255149|emb|CAK06223.1| hook associated protein i homolog (agr_c_1014p) [Rhizobium leguminosarum bv. viciae 3841] Length = 495
Score = 319 bits (817), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 179/494 (36%), Positives = 280/494 (56%), Gaps = 19/494 (3%)
Query: 1 MSLLAVFNKAQNICNNASQQFASIVRNIENADNKNYVRRDTMTTISPENVTVVT-QRSEN 59
MSL + N AQ+I NN Q + + NI NA NK+YVRR M T S VV R++
Sbjct: 1 MSLTSALNTAQSIFNNTGTQSSVVSNNISNAGNKDYVRRQAMLTTSLNGAQVVKIDRAQE 60
Query: 60 KNMFDKVLHAHSSAIGQQRLLQSFEALKEMMSADDHYNNSPTHYISKLRDSLESYSKNLS 119
+ + + L S QQ LL E LK ++ +D Y SP+ Y+ + L+++
Sbjct: 61 EALLRQYLKTSSQDSAQQTLLSGLEDLKSIVGGND-YETSPSTYLGVFQQKLQAFRTTPG 119
Query: 120 EDILGKTVIDNAEEVVQNFNTSAREVQKIRADADKEIELEISNLRRFLSELTVVNDAIKF 179
+ + I A++V + N +++ VQ +RA ADK+I ++ L LS+ N+A+K
Sbjct: 120 STVAAQGAITAAQDVANSLNNASQSVQNVRATADKQIATDVDKLNTLLSDFEKANNAVKT 179
Query: 180 KTASKHDAHDFLDQRDVLLQKISEIIGISTIVRNNNDMVVYTSDGTTLFETVPRDINFEK 239
T+S DA LD+R+ L++IS+I+G++T R+NNDMV+ TSDGT LFET+PR++ F+
Sbjct: 180 ATSSGADASGALDEREKALKQISQIVGVNTTTRDNNDMVLSTSDGTILFETIPREVTFKS 239
Query: 240 MNSYTVTSESNPIFIDGVVVSSNQGSAVP-KGKIKALLQIRDSVVPIFQNQLDEMARVLI 298
+ YT T N +++DGV + GS +G +++LLQ+RD + P FQ QLDE+AR L+
Sbjct: 240 QDVYTATIAGNSVYVDGVALPRGSGSTTTGQGSLQSLLQVRDEIAPNFQKQLDEVARGLV 299
Query: 299 GSFSEKDPIAGNSENVPGLFI-ADGIKDLDNKLCQGISETICVNPQY----RSNPSFLRD 353
F E++ +AG + VPGLF + G D G++ TI V+ + +P LRD
Sbjct: 300 SLFKEQNTVAGPAY-VPGLFTWSGGTVDTGATAVAGMAATITVSSRVITSQGGDPMRLRD 358
Query: 354 GGSVSKKFLWNVKNLAGYPDLINHYCDSFNKNFIFDPVA----------GINTNVTLLEY 403
GG + N +GY ++ + + FDP A GI++NV+++E+
Sbjct: 359 GGINLTGLVLNTSGASGYTTELDRLYTALGSDIDFDPAAGTPVGFDATTGIDSNVSIMEF 418
Query: 404 ARNSIGWLEKNRSDSHDLHMKSQVVFNHISESYSNTVGVNLQEELSFLIKVEQSYNISNK 463
A NS+GWLE+ RS++ + + E+YSN GVNL EEL+ L+ +EQSY + K
Sbjct: 419 ATNSLGWLEQYRSNATTAAENTSAALSRSDEAYSNETGVNLDEELTLLLDIEQSYKAATK 478
Query: 464 LIMFTDKMLQTLLE 477
++ D+ML++LL+
Sbjct: 479 ILNAVDEMLKSLLD 492