BLAST/PSIBLAST alignment of GI: 254780524 and GI: 116250501 at iteration 1
>gi|116250501|ref|YP_766339.1| flagellar hook-associated protein FlgK [Rhizobium leguminosarum bv. viciae 3841] Length = 495
>gi|115255149|emb|CAK06223.1| hook associated protein i homolog (agr_c_1014p) [Rhizobium leguminosarum bv. viciae 3841] Length = 495
 Score =  319 bits (817), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 179/494 (36%), Positives = 280/494 (56%), Gaps = 19/494 (3%)

Query: 1   MSLLAVFNKAQNICNNASQQFASIVRNIENADNKNYVRRDTMTTISPENVTVVT-QRSEN 59
           MSL +  N AQ+I NN   Q + +  NI NA NK+YVRR  M T S     VV   R++ 
Sbjct: 1   MSLTSALNTAQSIFNNTGTQSSVVSNNISNAGNKDYVRRQAMLTTSLNGAQVVKIDRAQE 60

Query: 60  KNMFDKVLHAHSSAIGQQRLLQSFEALKEMMSADDHYNNSPTHYISKLRDSLESYSKNLS 119
           + +  + L   S    QQ LL   E LK ++  +D Y  SP+ Y+   +  L+++     
Sbjct: 61  EALLRQYLKTSSQDSAQQTLLSGLEDLKSIVGGND-YETSPSTYLGVFQQKLQAFRTTPG 119

Query: 120 EDILGKTVIDNAEEVVQNFNTSAREVQKIRADADKEIELEISNLRRFLSELTVVNDAIKF 179
             +  +  I  A++V  + N +++ VQ +RA ADK+I  ++  L   LS+    N+A+K 
Sbjct: 120 STVAAQGAITAAQDVANSLNNASQSVQNVRATADKQIATDVDKLNTLLSDFEKANNAVKT 179

Query: 180 KTASKHDAHDFLDQRDVLLQKISEIIGISTIVRNNNDMVVYTSDGTTLFETVPRDINFEK 239
            T+S  DA   LD+R+  L++IS+I+G++T  R+NNDMV+ TSDGT LFET+PR++ F+ 
Sbjct: 180 ATSSGADASGALDEREKALKQISQIVGVNTTTRDNNDMVLSTSDGTILFETIPREVTFKS 239

Query: 240 MNSYTVTSESNPIFIDGVVVSSNQGSAVP-KGKIKALLQIRDSVVPIFQNQLDEMARVLI 298
            + YT T   N +++DGV +    GS    +G +++LLQ+RD + P FQ QLDE+AR L+
Sbjct: 240 QDVYTATIAGNSVYVDGVALPRGSGSTTTGQGSLQSLLQVRDEIAPNFQKQLDEVARGLV 299

Query: 299 GSFSEKDPIAGNSENVPGLFI-ADGIKDLDNKLCQGISETICVNPQY----RSNPSFLRD 353
             F E++ +AG +  VPGLF  + G  D       G++ TI V+ +       +P  LRD
Sbjct: 300 SLFKEQNTVAGPAY-VPGLFTWSGGTVDTGATAVAGMAATITVSSRVITSQGGDPMRLRD 358

Query: 354 GGSVSKKFLWNVKNLAGYPDLINHYCDSFNKNFIFDPVA----------GINTNVTLLEY 403
           GG      + N    +GY   ++    +   +  FDP A          GI++NV+++E+
Sbjct: 359 GGINLTGLVLNTSGASGYTTELDRLYTALGSDIDFDPAAGTPVGFDATTGIDSNVSIMEF 418

Query: 404 ARNSIGWLEKNRSDSHDLHMKSQVVFNHISESYSNTVGVNLQEELSFLIKVEQSYNISNK 463
           A NS+GWLE+ RS++      +    +   E+YSN  GVNL EEL+ L+ +EQSY  + K
Sbjct: 419 ATNSLGWLEQYRSNATTAAENTSAALSRSDEAYSNETGVNLDEELTLLLDIEQSYKAATK 478

Query: 464 LIMFTDKMLQTLLE 477
           ++   D+ML++LL+
Sbjct: 479 ILNAVDEMLKSLLD 492