BLAST/PSIBLAST alignment of GI: 254780524 and GI: 209547947 at iteration 1
>gi|209547947|ref|YP_002279864.1| flagellar hook-associated protein FlgK [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 495
>gi|209533703|gb|ACI53638.1| flagellar hook-associated protein FlgK [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 495
 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 183/494 (37%), Positives = 276/494 (55%), Gaps = 19/494 (3%)

Query: 1   MSLLAVFNKAQNICNNASQQFASIVRNIENADNKNYVRRDTMTTISPENVTVVT-QRSEN 59
           MSL +  N AQNI NN   Q + +  NI NA NK+YVRR  M T S     VV   R++ 
Sbjct: 1   MSLTSALNTAQNIFNNTGTQSSVVSNNISNAGNKDYVRRQAMLTTSLNGAQVVKIDRAQE 60

Query: 60  KNMFDKVLHAHSSAIGQQRLLQSFEALKEMMSADDHYNNSPTHYISKLRDSLESYSKNLS 119
             +  + L   S    QQ LL   E LK +M  +D Y  SP+ Y+   +  L+++     
Sbjct: 61  DALLRQYLKTSSQDSAQQALLGGLEDLKSIMGGND-YETSPSTYLGVFQQKLQAFRTTPG 119

Query: 120 EDILGKTVIDNAEEVVQNFNTSAREVQKIRADADKEIELEISNLRRFLSELTVVNDAIKF 179
             +  +  I  A++V  + N +++ VQ +RA ADK+I  ++  L   LS+    N+A+K 
Sbjct: 120 STVAAQGAITAAQDVANSLNNASQSVQDVRATADKQIATDVDKLNTLLSDFEKANNAVKT 179

Query: 180 KTASKHDAHDFLDQRDVLLQKISEIIGISTIVRNNNDMVVYTSDGTTLFETVPRDINFEK 239
            TAS  DA   LD+R+  L++IS+I+G++   R+NNDMV+ T+DGT LFET+PR + F+ 
Sbjct: 180 ATASGADASGALDEREKALKQISQIVGVNATTRDNNDMVLSTTDGTILFETIPRKVTFKS 239

Query: 240 MNSYTVTSESNPIFIDGVVVSSNQGS-AVPKGKIKALLQIRDSVVPIFQNQLDEMARVLI 298
            + Y  T   N ++IDGV ++   GS    +G +++LLQ+RD + P FQ QLDE+AR L+
Sbjct: 240 QDVYNATITGNSVYIDGVALARGSGSTTTAQGSLQSLLQVRDEIAPNFQKQLDEVARGLV 299

Query: 299 GSFSEKDPIAGNSENVPGLFI-ADGIKDLDNKLCQGISETICVNPQY----RSNPSFLRD 353
             F E++  AG    VPGLF  + G  D       G++ TI V+ +       +P  LRD
Sbjct: 300 SLFKEQN-TAGPPAYVPGLFTWSGGTVDTGGTAIAGMASTITVSSRVITSQGGDPMRLRD 358

Query: 354 GGSVSKKFLWNVKNLAGYPDLINHYCDSFNKNFIFDPVA----------GINTNVTLLEY 403
           GG      + N   L+GY   ++    +   +  FDP A          GI++NV+++EY
Sbjct: 359 GGINVNGVVLNPTGLSGYTTELDRLYTALGSDIDFDPAAGPAVGFDATTGIDSNVSIMEY 418

Query: 404 ARNSIGWLEKNRSDSHDLHMKSQVVFNHISESYSNTVGVNLQEELSFLIKVEQSYNISNK 463
           A NS+GWLE+ RS++      S    +   E+YSN  GVNL EEL+ L+ +EQSY  + K
Sbjct: 419 ATNSLGWLEQYRSNATTAAENSSAALSRSDEAYSNETGVNLDEELTLLLDIEQSYKAATK 478

Query: 464 LIMFTDKMLQTLLE 477
           ++   D+ML++LL+
Sbjct: 479 ILNAVDEMLKSLLD 492