BLAST/PSIBLAST alignment of GI: 254780524 and GI: 209547947 at iteration 1
>gi|209547947|ref|YP_002279864.1| flagellar hook-associated protein FlgK [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 495
>gi|209533703|gb|ACI53638.1| flagellar hook-associated protein FlgK [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 495
Score = 319 bits (818), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 183/494 (37%), Positives = 276/494 (55%), Gaps = 19/494 (3%)
Query: 1 MSLLAVFNKAQNICNNASQQFASIVRNIENADNKNYVRRDTMTTISPENVTVVT-QRSEN 59
MSL + N AQNI NN Q + + NI NA NK+YVRR M T S VV R++
Sbjct: 1 MSLTSALNTAQNIFNNTGTQSSVVSNNISNAGNKDYVRRQAMLTTSLNGAQVVKIDRAQE 60
Query: 60 KNMFDKVLHAHSSAIGQQRLLQSFEALKEMMSADDHYNNSPTHYISKLRDSLESYSKNLS 119
+ + L S QQ LL E LK +M +D Y SP+ Y+ + L+++
Sbjct: 61 DALLRQYLKTSSQDSAQQALLGGLEDLKSIMGGND-YETSPSTYLGVFQQKLQAFRTTPG 119
Query: 120 EDILGKTVIDNAEEVVQNFNTSAREVQKIRADADKEIELEISNLRRFLSELTVVNDAIKF 179
+ + I A++V + N +++ VQ +RA ADK+I ++ L LS+ N+A+K
Sbjct: 120 STVAAQGAITAAQDVANSLNNASQSVQDVRATADKQIATDVDKLNTLLSDFEKANNAVKT 179
Query: 180 KTASKHDAHDFLDQRDVLLQKISEIIGISTIVRNNNDMVVYTSDGTTLFETVPRDINFEK 239
TAS DA LD+R+ L++IS+I+G++ R+NNDMV+ T+DGT LFET+PR + F+
Sbjct: 180 ATASGADASGALDEREKALKQISQIVGVNATTRDNNDMVLSTTDGTILFETIPRKVTFKS 239
Query: 240 MNSYTVTSESNPIFIDGVVVSSNQGS-AVPKGKIKALLQIRDSVVPIFQNQLDEMARVLI 298
+ Y T N ++IDGV ++ GS +G +++LLQ+RD + P FQ QLDE+AR L+
Sbjct: 240 QDVYNATITGNSVYIDGVALARGSGSTTTAQGSLQSLLQVRDEIAPNFQKQLDEVARGLV 299
Query: 299 GSFSEKDPIAGNSENVPGLFI-ADGIKDLDNKLCQGISETICVNPQY----RSNPSFLRD 353
F E++ AG VPGLF + G D G++ TI V+ + +P LRD
Sbjct: 300 SLFKEQN-TAGPPAYVPGLFTWSGGTVDTGGTAIAGMASTITVSSRVITSQGGDPMRLRD 358
Query: 354 GGSVSKKFLWNVKNLAGYPDLINHYCDSFNKNFIFDPVA----------GINTNVTLLEY 403
GG + N L+GY ++ + + FDP A GI++NV+++EY
Sbjct: 359 GGINVNGVVLNPTGLSGYTTELDRLYTALGSDIDFDPAAGPAVGFDATTGIDSNVSIMEY 418
Query: 404 ARNSIGWLEKNRSDSHDLHMKSQVVFNHISESYSNTVGVNLQEELSFLIKVEQSYNISNK 463
A NS+GWLE+ RS++ S + E+YSN GVNL EEL+ L+ +EQSY + K
Sbjct: 419 ATNSLGWLEQYRSNATTAAENSSAALSRSDEAYSNETGVNLDEELTLLLDIEQSYKAATK 478
Query: 464 LIMFTDKMLQTLLE 477
++ D+ML++LL+
Sbjct: 479 ILNAVDEMLKSLLD 492