PSIBLAST alignment of GI: 254780524 and protein with PDB id: 3a69
>gi|281306984|pdb|3A69|A Chain A, Atomic Model Of The Bacterial Flagellar Hook Based On Docking An X-Ray Derived Structure And Terminal Two Alpha- Helices Into An 7.1 Angstrom Resolution Cryoem Map Length = 402
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/473 (9%), Positives = 109/473 (23%), Gaps = 72/473 (15%)
Query: 6 VFNKAQNICNNASQQFASIVRNIENADNKNYVRRDTMTTISPENVTVVTQRSENKNMFDK 65
F++A + N A+ I NI N+ + V
Sbjct: 1 SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVG------------ 48
Query: 66 VLHAHSSAIGQQRLLQSFEALKEMMSADDHYNNSPTHYISKLRDSLESYSKNLSEDILGK 125
L + + + N ++ ++ + +
Sbjct: 49 -------------LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSR 95
Query: 126 TVIDNAEEVVQNFNTSAREVQKIRADADKEIELEISNLRRFLSELTVVNDAIKFKTASKH 185
+E N ++ A + N A +
Sbjct: 96 NGQFKLDENRNLVNMQGMQLTGYPATGTPPTIQQ------------GANPAPITIPNTLM 143
Query: 186 DAHDFLDQRDVLLQKISEIIGISTIVRNNNDMVVYTSDGTTLFETVPRDINFEKMNSYTV 245
A + ++ + T ++ T++++ + T
Sbjct: 144 AAKSTTTASMQINLNSTDPVPSKTPFSVSDADSYNKKGTVTVYDSQGNAHDMNVYFVKTK 203
Query: 246 TSESNPIFIDGVVVSSNQGSAVPKGKIKALLQIRDSVVPIFQNQLDEMARVLIGSFSEKD 305
+E D ++ + L ++ S +
Sbjct: 204 DNEWAVYTHDSSDPAATAPTTAS-------------------TTLKFNENGILESGGTVN 244
Query: 306 PIAGNSENVPGLFIADGIKDLDNKLCQGISETICVNPQYRSNPSFLRDGGSVSKKFLWNV 365
G + Q + + + K
Sbjct: 245 ITTGTING--------------ATAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVS 290
Query: 366 KNLAGYPDLINHYCDSFNKNFIFDPVAGINTNVTLLEYARNSIGWLEKNRSDSHDLHMKS 425
+ ++ +Y + + +A N L N W S L
Sbjct: 291 YQINNDGTVVGNYSNEQEQVLGQIVLANFANNEGLASQGDNV--WAATQASGVALLGTAG 348
Query: 426 QVVFNHISESYSNTVGVNLQEELSFLIKVEQSYNISNKLIMFTDKMLQTLLEG 478
F ++ V+L +EL +I +++Y + + I D++L TL+
Sbjct: 349 SGNFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401