RPSBLAST alignment of GI: 254780524 and MMDB domain: 2d4y_A_1-268_356-463

>2d4y_A (A:1-268,A:356-463) HAP1, flagellar HOOK-associated protein 1; multi-domain protein, alpha-helical bundle, complex all- beta folds, structural protein; 2.10A {Salmonella typhimurium}Length = 376

 Score =  134 bits (339), Expect = 2e-32
 Identities = 56/395 (14%), Positives = 134/395 (33%), Gaps = 28/395 (7%)

Query: 62  MFDKVLHAHSSAIGQQRLLQSFEALKEMMSADDHYNNSPTHYISKLRDSLESYSKNLSED 121
           + +++  A + + G     +    +  +++      +S +  +     SL++   N  + 
Sbjct: 7   ITNQLRGAQNQSSGLTTRYEQMSKIDNLLADKS---SSLSGSLQSFFTSLQTLVSNAEDP 63

Query: 122 ILGKTVIDNAEEVVQNFNTSAREVQKIRADADKEIELEISNLRRFLSELTVVNDAIK--F 179
              + +I  AE +V  F T+ + ++      +  I   ++ +  +  ++  +ND I    
Sbjct: 64  AARQALIGKAEGLVNQFKTTDQYLRDQDKQVNIAIGSSVAQINNYAKQIANLNDQISRMT 123

Query: 180 KTASKHDAHDFLDQRDVLLQKISEIIGISTIVRNNNDMVVYTSDGTTLFETVPRDINFEK 239
              +    +D LDQRD L+ ++++I+G+   V++     +  ++G TL +          
Sbjct: 124 GVGAGASPNDLLDQRDQLVSELNKIVGVEVSVQDGGTYNLTMANGYTLVQG-STARQLAA 182

Query: 240 MNSYTVTSESNPIFIDGV-VVSSNQGSAVPKGKIKALLQIRDSVVPIFQNQLDEMARVLI 298
           + S    + +   ++D            +  G +  LL  R   +   +N L ++A    
Sbjct: 183 VPSSADPTRTTVAYVDEAAGNIEIPEKLLNTGSLGGLLTFRSQDLDQTRNTLGQLALAFA 242

Query: 299 GSFSEKDPIAGNSENVPGLFIADGIKDLDNKLCQGISETICVNPQYRSNPSFLRDGGSVS 358
            +F+ +     +++   G         + +     +  T        S      D  +  
Sbjct: 243 DAFNAQHTKGYDADGNKGKDFFSIGSAIVDM---NVKVTNEAEIAMASESKLDPDVDTGD 299

Query: 359 KKFLWNVKNLAGYPDLINHYCDSFNKNFIFDPVAGINTNVTLLEYARNSIGWLEKNRSDS 418
                N + L    +                    +  N T  +     +  +    S  
Sbjct: 300 SDNR-NGQALLDLQN-----------------SNVVGGNKTFNDAYATLVSDVGNKTSTL 341

Query: 419 HDLHMKSQVVFNHISESYSNTVGVNLQEELSFLIK 453
                    V   + +   +  GVNL EE   L +
Sbjct: 342 KTSSTTQANVVKQLYKQQQSVSGVNLDEEYGNLQR 376