RPSBLAST alignment of GI: 254780524 and protein with PDBid: 2pff
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688
Score = 43.3 bits (101), Expect = 1e-04
Identities = 75/335 (22%), Positives = 132/335 (39%), Gaps = 91/335 (27%)
Query: 110 SLESYSKNLSEDILGKTVIDNAEEV---VQNFNTSAREVQKIRADADKEIELEISNLRRF 166
S++ S NL+ + ++ ++ V+N E++ ++ +A+ EI E N F
Sbjct: 1236 SVKYASPNLNMKYRKRQLVTREAQIKDWVEN------ELEALKLEAE-EIPSEDQN--EF 1286
Query: 167 LSELT--VVNDA-IKFKTASKHDAHDFLDQRDVLLQKISEIIG-ISTIVRNNNDMVVYTS 222
L E T + N+A + + A + +DF +RD +I+ + G ++T +D+ V +
Sbjct: 1287 LLERTREIHNEAESQLRAAQQQWGNDFY-KRD---PRIAPLRGALATYGLTIDDLGVASF 1342
Query: 223 DGTTLFETVPRDIN----FEKMNSYTVTSESNPIFIDGVVVSSNQGSAVPKGK-----IK 273
GT+ T D N +M + SE NP+ GV G PKG +
Sbjct: 1343 HGTS---TKANDKNESATINEMMKHLGRSEGNPVI--GVFQKFLTGH--PKGAAGAWMMN 1395
Query: 274 ALLQIRDS-VVPIFQNQ------LDEMARVLIGSFSEKDPIAGNSENVPGLFIADGIKDL 326
LQI +S ++P +N L++ VL S + K DG++ +
Sbjct: 1396 GALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLK---------------TDGVRAV 1440
Query: 327 DNK---LCQGISETICVNPQY---------------------RSNPSFLRDGGSVSKKFL 362
Q + I V+P Y +S F +G +K F+
Sbjct: 1441 SITSFGFGQKGGQAIVVHPDYLYGAITEDRYNEYVAKVSAREKSAYKFFHNGMIYNKLFV 1500
Query: 363 WNVKNLAGYPDLINHYCDSFNKNFIFDPVAGINTN 397
K A P Y D ++ DP+A ++ +
Sbjct: 1501 --SKEHA--P-----YTDELEEDVYLDPLARVSKD 1526